Your job contains 1 sequence.
>psy6984
MSTETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRL
KGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ
IVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL
TNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITAL
CFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSS
SRDKTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLF
AGYSDNTIRVWQVSVTSRGG
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy6984
(380 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0020618 - symbol:Rack1 "Receptor of activated prot... 1169 9.8e-119 1
WB|WBGene00010556 - symbol:rack-1 species:6239 "Caenorhab... 910 1.9e-110 2
UNIPROTKB|Q21215 - symbol:rack-1 "Guanine nucleotide-bind... 910 1.9e-110 2
UNIPROTKB|G8JL27 - symbol:GNB2L1 "Guanine nucleotide-bind... 1072 1.9e-108 1
UNIPROTKB|P63247 - symbol:GNB2L1 "Guanine nucleotide-bind... 1072 1.9e-108 1
UNIPROTKB|P63243 - symbol:GNB2L1 "Guanine nucleotide-bind... 1072 1.9e-108 1
UNIPROTKB|F1PLR0 - symbol:GNB2L1 "Uncharacterized protein... 1072 1.9e-108 1
UNIPROTKB|P63244 - symbol:GNB2L1 "Guanine nucleotide-bind... 1072 1.9e-108 1
UNIPROTKB|P63246 - symbol:GNB2L1 "Guanine nucleotide-bind... 1072 1.9e-108 1
UNIPROTKB|B1N1C2 - symbol:GNB2L1 "Uncharacterized protein... 1072 1.9e-108 1
UNIPROTKB|Q4R7Y4 - symbol:GNB2L1 "Guanine nucleotide-bind... 1072 1.9e-108 1
UNIPROTKB|Q5U275 - symbol:gnb2l1 "LOC495666 protein" spec... 1072 1.9e-108 1
MGI|MGI:101849 - symbol:Gnb2l1 "guanine nucleotide bindin... 1072 1.9e-108 1
RGD|69229 - symbol:Gnb2l1 "guanine nucleotide binding pro... 1072 1.9e-108 1
UNIPROTKB|O42249 - symbol:gnb2l1 "Guanine nucleotide-bind... 1071 2.4e-108 1
ZFIN|ZDB-GENE-990415-89 - symbol:gnb2l1 "guanine nucleoti... 1065 1.0e-107 1
UNIPROTKB|I3LI24 - symbol:GNB2L1 "Guanine nucleotide-bind... 1026 1.4e-103 1
UNIPROTKB|G4MQX3 - symbol:MGG_04719 "Guanine nucleotide-b... 968 2.0e-97 1
ASPGD|ASPL0000014385 - symbol:cpcB species:162425 "Emeric... 945 5.3e-95 1
UNIPROTKB|P49027 - symbol:RACK1A "Guanine nucleotide-bind... 806 1.4e-93 2
TAIR|locus:2092707 - symbol:RACK1C_AT "AT3G18130" species... 861 2.7e-88 2
TAIR|locus:2008159 - symbol:RACK1B_AT "AT1G48630" species... 859 4.4e-88 2
TAIR|locus:2194060 - symbol:ATARCA "AT1G18080" species:37... 877 8.6e-88 1
POMBASE|SPAC6B12.15 - symbol:cpc2 "RACK1 ortholog Cpc2" s... 857 1.1e-85 1
UNIPROTKB|D6RFX4 - symbol:GNB2L1 "Guanine nucleotide-bind... 852 3.8e-85 1
GENEDB_PFALCIPARUM|PF08_0019 - symbol:PF08_0019 "receptor... 789 1.8e-78 1
UNIPROTKB|Q8IBA0 - symbol:PfRACK "Receptor for activated ... 789 1.8e-78 1
CGD|CAL0000124 - symbol:ASC1 species:5476 "Candida albica... 772 1.1e-76 1
UNIPROTKB|P83774 - symbol:ASC1 "Guanine nucleotide-bindin... 772 1.1e-76 1
DICTYBASE|DDB_G0275045 - symbol:gpbB "Guanine nucleotide-... 765 6.3e-76 1
SGD|S000004722 - symbol:ASC1 "G-protein beta subunit and ... 677 1.3e-66 1
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 431 6.3e-41 2
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 396 1.3e-37 2
RGD|2323942 - symbol:Poc1b "POC1 centriolar protein homol... 345 1.0e-34 2
MGI|MGI:1918511 - symbol:Poc1b "POC1 centriolar protein h... 359 6.7e-33 1
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 328 1.3e-32 2
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 337 1.6e-32 2
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 319 6.9e-32 2
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 320 8.8e-32 2
UNIPROTKB|A5PKH9 - symbol:WDR51B "Uncharacterized protein... 345 2.0e-31 1
UNIPROTKB|Q8TC44 - symbol:POC1B "POC1 centriolar protein ... 344 2.6e-31 1
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 298 3.0e-31 2
UNIPROTKB|Q5RD06 - symbol:POC1B "POC1 centriolar protein ... 343 3.3e-31 1
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 342 4.2e-31 1
UNIPROTKB|F1P8S8 - symbol:POC1B "Uncharacterized protein"... 335 2.3e-30 1
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 335 2.3e-30 1
ZFIN|ZDB-GENE-031118-54 - symbol:poc1b "POC1 centriolar p... 309 2.7e-30 2
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 332 4.9e-30 1
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 335 8.6e-30 1
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 328 1.3e-29 1
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 266 1.8e-29 2
UNIPROTKB|G3V1X0 - symbol:POC1B "POC1 centriolar protein ... 320 9.1e-29 1
UNIPROTKB|E9PFC6 - symbol:POC1A "POC1 centriolar protein ... 310 1.0e-27 1
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 308 1.7e-27 1
UNIPROTKB|G4NFU5 - symbol:MGG_08708 "WD repeat-containing... 222 6.7e-27 2
ZFIN|ZDB-GENE-040116-3 - symbol:pafah1b1b "platelet-activ... 257 9.6e-27 2
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 300 1.2e-26 1
UNIPROTKB|A5D7P3 - symbol:PAFAH1B1 "Platelet-activating f... 266 1.3e-26 2
UNIPROTKB|E2QY31 - symbol:PAFAH1B1 "Uncharacterized prote... 266 1.3e-26 2
UNIPROTKB|J9P388 - symbol:PAFAH1B1 "Uncharacterized prote... 266 1.3e-26 2
UNIPROTKB|P43034 - symbol:PAFAH1B1 "Platelet-activating f... 266 1.3e-26 2
UNIPROTKB|F2Z521 - symbol:PAFAH1B1 "Platelet-activating f... 266 1.3e-26 2
MGI|MGI:109520 - symbol:Pafah1b1 "platelet-activating fac... 266 1.3e-26 2
RGD|620331 - symbol:Pafah1b1 "platelet-activating factor ... 266 1.3e-26 2
UNIPROTKB|P63004 - symbol:Pafah1b1 "Platelet-activating f... 266 1.3e-26 2
UNIPROTKB|P43033 - symbol:PAFAH1B1 "Platelet-activating f... 266 1.3e-26 2
ZFIN|ZDB-GENE-040426-1993 - symbol:poc1a "POC1 centriolar... 299 1.5e-26 1
UNIPROTKB|Q9PTR5 - symbol:PAFAH1B1 "Lissencephaly-1 homol... 265 1.9e-26 2
UNIPROTKB|P74598 - symbol:sll1491 "Uncharacterized WD rep... 247 2.2e-26 2
ZFIN|ZDB-GENE-040116-2 - symbol:pafah1b1a "platelet-activ... 266 2.6e-26 2
UNIPROTKB|Q9GL51 - symbol:PAFAH1B1 "Platelet-activating f... 263 4.5e-26 2
ASPGD|ASPL0000031743 - symbol:AN8505 species:162425 "Emer... 305 5.7e-26 1
WB|WBGene00003047 - symbol:lis-1 species:6239 "Caenorhabd... 293 6.6e-26 1
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 266 7.0e-26 2
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 292 8.4e-26 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 292 8.4e-26 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 292 8.4e-26 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 292 8.4e-26 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 292 8.4e-26 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 292 8.4e-26 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 292 8.4e-26 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 288 2.2e-25 1
ASPGD|ASPL0000046644 - symbol:AN2021 species:162425 "Emer... 299 4.1e-25 1
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 285 4.6e-25 1
TAIR|locus:2043929 - symbol:AT2G43770 "AT2G43770" species... 249 7.3e-25 2
UNIPROTKB|Q229Z6 - symbol:TTHERM_01308010 "POC1 centriola... 289 1.3e-24 1
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 280 1.6e-24 1
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 280 1.6e-24 1
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 266 3.1e-24 2
MGI|MGI:1923896 - symbol:Wdr38 "WD repeat domain 38" spec... 273 6.0e-24 2
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 265 7.3e-24 2
DICTYBASE|DDB_G0288375 - symbol:lis1 "lissencephaly-1 hom... 250 1.2e-23 2
UNIPROTKB|Q96DI7 - symbol:SNRNP40 "U5 small nuclear ribon... 248 4.1e-23 2
UNIPROTKB|F1MLP7 - symbol:SNRNP40 "U5 small nuclear ribon... 248 4.4e-23 2
UNIPROTKB|F1SVA6 - symbol:SNRNP40 "Uncharacterized protei... 248 4.4e-23 2
ASPGD|ASPL0000017294 - symbol:AN3926 species:162425 "Emer... 270 4.6e-23 2
UNIPROTKB|Q2HJH6 - symbol:SNRNP40 "U5 small nuclear ribon... 248 5.6e-23 2
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 259 6.2e-23 2
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 249 6.4e-23 2
RGD|1309198 - symbol:Snrnp40 "small nuclear ribonucleopro... 247 7.8e-23 2
WARNING: Descriptions of 1526 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0020618 [details] [associations]
symbol:Rack1 "Receptor of activated protein kinase C 1"
species:7227 "Drosophila melanogaster" [GO:0005080 "protein kinase
C binding" evidence=NAS] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0035220 "wing disc development" evidence=IMP] [GO:0042335
"cuticle development" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0046716 "muscle cell homeostasis"
evidence=IGI] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016243 "regulation of autophagic vacuole size"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0018991 GO:GO:0005875
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048477 GO:GO:0007626 GO:GO:0042335 GO:GO:0035220
GO:GO:0046716 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 EMBL:U96491 EMBL:AY071661
RefSeq:NP_477269.1 UniGene:Dm.6830 ProteinModelPortal:O18640
SMR:O18640 DIP:DIP-17169N IntAct:O18640 MINT:MINT-795417
STRING:O18640 PaxDb:O18640 PRIDE:O18640 EnsemblMetazoa:FBtr0079565
EnsemblMetazoa:FBtr0331238 GeneID:34070 KEGG:dme:Dmel_CG7111
CTD:34070 FlyBase:FBgn0020618 InParanoid:O18640 OrthoDB:EOG4X3FGX
PhylomeDB:O18640 ChiTaRS:GNB2L1 GenomeRNAi:34070 NextBio:786727
Bgee:O18640 GermOnline:CG7111 Uniprot:O18640
Length = 318
Score = 1169 (416.6 bits), Expect = 9.8e-119, P = 9.8e-119
Identities = 228/318 (71%), Positives = 256/318 (80%)
Query: 3 TETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRD-DTNYGVPQKRLK 61
+ETLQLRGTL GHNGWVTQIATNPK PDTI+S SRD TLI+WKLTRD DTNYG PQKRL
Sbjct: 2 SETLQLRGTLIGHNGWVTQIATNPKDPDTIISASRDKTLIVWKLTRDEDTNYGYPQKRLY 61
Query: 62 GHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 121
GHSHFISD+VLSSDGNYALSGSWD+TLRLWDLAAGKTTRRFE HTKDVLSVAFS DNRQI
Sbjct: 62 GHSHFISDVVLSSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQI 121
Query: 122 VSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT 181
VS SRDKTIKLWNTLA CKFTI EDGH+DWVSCVRFSPNH NPIIVS GWDR VKVWNL
Sbjct: 122 VSGSRDKTIKLWNTLAECKFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLA 181
Query: 182 NCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALC 241
NCKLK NH GH GYLNTVTVSPDGSLC SGGKD A+LWDLNDGK+L+TL HNDII ALC
Sbjct: 182 NCKLKNNHHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWDLNDGKNLYTLEHNDIINALC 241
Query: 242 FSPNRSF------QKIKL-DIS--RTLQKSNL-ILYPINHGKMETPFFSLFRDVLSVAFS 291
FSPNR + IK+ D++ +T+++ ++ P + K + P LS+A+S
Sbjct: 242 FSPNRYWLCVAYGPSIKIWDLACKKTVEELRPEVVSPTS--KADQP------QCLSLAWS 293
Query: 292 VDNRQIVSSSRDKTIKLW 309
D + + + D TI++W
Sbjct: 294 TDGQTLFAGYSDNTIRVW 311
Score = 252 (93.8 bits), Expect = 1.7e-21, P = 1.7e-21
Identities = 58/117 (49%), Positives = 75/117 (64%)
Query: 262 SNLILYPINHGKMETPFFSL-FRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIV 320
S +L+ +N GK ++L D+++ NR + + +IK+W
Sbjct: 215 SKALLWDLNDGKN---LYTLEHNDIINALCFSPNRYWLCVAYGPSIKIW----------- 260
Query: 321 DLETKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVSVTS 377
DL KK VEELRP+VVS ++KAD P CLSLAWSTDGQTLFAGYSDNTIRVWQVSV++
Sbjct: 261 DLACKKTVEELRPEVVSPTSKADQPQCLSLAWSTDGQTLFAGYSDNTIRVWQVSVSA 317
Score = 201 (75.8 bits), Expect = 5.3e-14, P = 5.3e-14
Identities = 54/137 (39%), Positives = 74/137 (54%)
Query: 191 GHTGYLNTVTVSP-DGSLCASGGKDMNAMLW------DLNDGKHLHTLV-HNDIITALCF 242
GH G++ + +P D S +D ++W D N G L H+ I+ +
Sbjct: 13 GHNGWVTQIATNPKDPDTIISASRDKTLIVWKLTRDEDTNYGYPQKRLYGHSHFISDVVL 72
Query: 243 SPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSR 302
S + ++ +S + ++ L L+ + GK F +DVLSVAFS DNRQIVS SR
Sbjct: 73 SSDGNYA-----LSGSWDQT-LRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSR 126
Query: 303 DKTIKLWNTLAHCKFTI 319
DKTIKLWNTLA CKFTI
Sbjct: 127 DKTIKLWNTLAECKFTI 143
Score = 158 (60.7 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 58/183 (31%), Positives = 86/183 (46%)
Query: 147 GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS-------GHTGYLNTV 199
GH+ WV+ + +P + II SA D+ + VW LT + N+ GH+ +++ V
Sbjct: 13 GHNGWVTQIATNPKDPDTII-SASRDKTLIVWKLTRDE-DTNYGYPQKRLYGHSHFISDV 70
Query: 200 TVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSP-NR---SFQKIK-L 253
+S DG+ SG D LWDL GK H + ++ FS NR S + K +
Sbjct: 71 VLSSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSRDKTI 130
Query: 254 DISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA 313
+ TL + + H T + S R S S N IVS D+T+K+WN LA
Sbjct: 131 KLWNTLAECKFTIQEDGH----TDWVSCVR--FSPNHS--NPIIVSCGWDRTVKVWN-LA 181
Query: 314 HCK 316
+CK
Sbjct: 182 NCK 184
Score = 142 (55.0 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 54/226 (23%), Positives = 97/226 (42%)
Query: 14 GHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLS 73
GH V +A + I+S SRD T+ +W T + + + + GH+ ++S + S
Sbjct: 104 GHTKDVLSVAFSADNRQ-IVSGSRDKTIKLWN-TLAECKFTIQED---GHTDWVSCVRFS 158
Query: 74 SDGNYAL--SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
+ + + S WD+T+++W+LA K H + +V S D S +D
Sbjct: 159 PNHSNPIIVSCGWDRTVKVWNLANCKLKNNHHGHNGYLNTVTVSPDGSLCTSGGKDSKAL 218
Query: 132 LWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS- 190
LW+ +E H+D ++ + FSPN + V+ G +K+W+L CK +
Sbjct: 219 LWDLNDGKNLYTLE--HNDIINALCFSPNRYW-LCVAYG--PSIKIWDLA-CKKTVEELR 272
Query: 191 ----GHTGYLN-----TVTVSPDGSLCASGGKDMNAMLWDLNDGKH 227
T + ++ S DG +G D +W ++ H
Sbjct: 273 PEVVSPTSKADQPQCLSLAWSTDGQTLFAGYSDNTIRVWQVSVSAH 318
>WB|WBGene00010556 [details] [associations]
symbol:rack-1 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0040017
"positive regulation of locomotion" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006997 "nucleus organization" evidence=IMP] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0048675 "axon extension" evidence=IMP]
[GO:0005813 "centrosome" evidence=IDA] [GO:0000281 "cytokinesis
after mitosis" evidence=IMP] [GO:0040038 "polar body extrusion
after meiotic divisions" evidence=IMP] [GO:0051304 "chromosome
separation" evidence=IMP] [GO:0000776 "kinetochore" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005635 "nuclear
envelope" evidence=IDA] [GO:0033365 "protein localization to
organelle" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008045 "motor neuron axon guidance"
evidence=IGI;IMP] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030424 "axon" evidence=IDA] [GO:0044297 "cell body"
evidence=IDA] [GO:0030334 "regulation of cell migration"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0005737 GO:GO:0018991
GO:GO:0040010 GO:GO:0005635 GO:GO:0005813 GO:GO:0000776
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426 GO:GO:0030334
GO:GO:0008045 GO:GO:0040035 GO:GO:0000281 GO:GO:0033365
GO:GO:0040038 GO:GO:0044297 GO:GO:0006997 GO:GO:0048675 EMBL:Z69664
HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 PIR:T23309 RefSeq:NP_501859.1
ProteinModelPortal:Q21215 SMR:Q21215 DIP:DIP-26516N IntAct:Q21215
MINT:MINT-1071040 STRING:Q21215 World-2DPAGE:0020:Q21215
PaxDb:Q21215 PRIDE:Q21215 EnsemblMetazoa:K04D7.1.1
EnsemblMetazoa:K04D7.1.2 EnsemblMetazoa:K04D7.1.3
EnsemblMetazoa:K04D7.1.4 GeneID:177895 KEGG:cel:CELE_K04D7.1
UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1 InParanoid:Q21215
NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 910 (325.4 bits), Expect = 1.9e-110, Sum P(2) = 1.9e-110
Identities = 168/251 (66%), Positives = 202/251 (80%)
Query: 1 MSTETLQLRGTLNGHNGWVTQIATNPKFPDT-ILSCSRDNTLIIWKLTR----DDTNYGV 55
M E ++L GTL GH GWVTQIAT + T +LS SRD T+++W + D+ G
Sbjct: 1 MVQEQMKLTGTLEGHTGWVTQIATYTRNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGR 60
Query: 56 PQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 115
P + L GH+HF+SD+V+SSDG +ALSGSWDKTLRLWDL G +TR+F HTKDVLSVAFS
Sbjct: 61 PVRSLTGHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFS 120
Query: 116 VDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMV 175
DNRQIVS SRDK+IKLWNTLA CK+TI +D H+DWVS VRFSP++++P+IVSAGWD++V
Sbjct: 121 ADNRQIVSGSRDKSIKLWNTLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVV 180
Query: 176 KVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHND 235
KVWNL NC+LK NH GHTGY+NTVTVSPDGSLCASGGKD AMLWDLN+GKHL+TL ND
Sbjct: 181 KVWNLGNCRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLPGND 240
Query: 236 IITALCFSPNR 246
+I A+ FSPNR
Sbjct: 241 VINAMSFSPNR 251
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 74/225 (32%), Positives = 114/225 (50%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
+L GHN +V+ + + LS S D TL +W D N GV ++ H+ + +
Sbjct: 64 SLTGHNHFVSDVVISSD-GQFALSGSWDKTLRLW-----DLNQGVSTRQFISHTKDVLSV 117
Query: 71 VLSSDGNYALSGSWDKTLRLWD-LAAGKTTRRFEDHTKDVLSVAFSVDNRQ--IVSSSRD 127
S+D +SGS DK+++LW+ LA K T + HT V +V FS NR IVS+ D
Sbjct: 118 AFSADNRQIVSGSRDKSIKLWNTLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWD 177
Query: 128 KTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKI 187
K +K+WN L +C+ GH+ +V+ V SP+ + S G D +W+L K
Sbjct: 178 KVVKVWN-LGNCRLKTNHIGHTGYVNTVTVSPD--GSLCASGGKDGQAMLWDLNEGKHLY 234
Query: 188 NHSGHTGYLNTVTVSPDGS-LCASGGKDMNAMLWDLNDGKHLHTL 231
G+ +N ++ SP+ LCA+ G + +WDL D K + L
Sbjct: 235 TLPGND-VINAMSFSPNRYWLCAAVGSSIK--IWDLEDKKEIEEL 276
Score = 222 (83.2 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 64/181 (35%), Positives = 92/181 (50%)
Query: 184 KLKINHSGHTGYLNTVTVSP--DGSLCASGGKDMNAMLWDLND---------GKHLHTLV 232
KL GHTG++ + D + S +D ++WD++ G+ + +L
Sbjct: 7 KLTGTLEGHTGWVTQIATYTRNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLT 66
Query: 233 -HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFS 291
HN ++ + S + F +S + K+ L L+ +N G F S +DVLSVAFS
Sbjct: 67 GHNHFVSDVVISSDGQFA-----LSGSWDKT-LRLWDLNQGVSTRQFISHTKDVLSVAFS 120
Query: 292 VDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADPPMCLSLA 351
DNRQIVS SRDK+IKLWNTLA CK+TI D V +R S S + P+ +S
Sbjct: 121 ADNRQIVSGSRDKSIKLWNTLAQCKYTITDDCHTDWVSTVR---FSPSNR--DPVIVSAG 175
Query: 352 W 352
W
Sbjct: 176 W 176
Score = 201 (75.8 bits), Expect = 1.9e-110, Sum P(2) = 1.9e-110
Identities = 49/114 (42%), Positives = 73/114 (64%)
Query: 265 ILYPINHGKMETPFFSL-FRDVLS-VAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDL 322
+L+ +N GK ++L DV++ ++FS NR + ++ +IK+W DL
Sbjct: 223 MLWDLNEGKH---LYTLPGNDVINAMSFS-PNRYWLCAAVGSSIKIW-----------DL 267
Query: 323 ETKKMVEELRPDVVSQ-STKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVSV 375
E KK +EEL+P++ S S++ P C+SLAWS DGQTLFAGY+DN IRV+QVS+
Sbjct: 268 EDKKEIEELKPEIASSGSSRGSSPQCISLAWSQDGQTLFAGYTDNIIRVYQVSI 321
Score = 156 (60.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 52/190 (27%), Positives = 88/190 (46%)
Query: 140 KFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNC----KLKINH-----S 190
K T +GH+ WV+ + + ++S+ D+ + VW++ + + I +
Sbjct: 7 KLTGTLEGHTGWVTQIATYTRNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLT 66
Query: 191 GHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQ 249
GH +++ V +S DG SG D LWDLN G + H + ++ FS + +
Sbjct: 67 GHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADN--R 124
Query: 250 KIKLDISRTLQKSNLILYPINHGKMETPFFSLFRD-VLSVAFSVDNRQ--IVSSSRDKTI 306
+I +S + KS + + K T D V +V FS NR IVS+ DK +
Sbjct: 125 QI---VSGSRDKSIKLWNTLAQCKY-TITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVV 180
Query: 307 KLWNTLAHCK 316
K+WN L +C+
Sbjct: 181 KVWN-LGNCR 189
>UNIPROTKB|Q21215 [details] [associations]
symbol:rack-1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0005737
GO:GO:0018991 GO:GO:0040010 GO:GO:0005635 GO:GO:0005813
GO:GO:0000776 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426
GO:GO:0030334 GO:GO:0008045 GO:GO:0040035 GO:GO:0000281
GO:GO:0033365 GO:GO:0040038 GO:GO:0044297 GO:GO:0006997
GO:GO:0048675 EMBL:Z69664 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 PIR:T23309
RefSeq:NP_501859.1 ProteinModelPortal:Q21215 SMR:Q21215
DIP:DIP-26516N IntAct:Q21215 MINT:MINT-1071040 STRING:Q21215
World-2DPAGE:0020:Q21215 PaxDb:Q21215 PRIDE:Q21215
EnsemblMetazoa:K04D7.1.1 EnsemblMetazoa:K04D7.1.2
EnsemblMetazoa:K04D7.1.3 EnsemblMetazoa:K04D7.1.4 GeneID:177895
KEGG:cel:CELE_K04D7.1 UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1
InParanoid:Q21215 NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 910 (325.4 bits), Expect = 1.9e-110, Sum P(2) = 1.9e-110
Identities = 168/251 (66%), Positives = 202/251 (80%)
Query: 1 MSTETLQLRGTLNGHNGWVTQIATNPKFPDT-ILSCSRDNTLIIWKLTR----DDTNYGV 55
M E ++L GTL GH GWVTQIAT + T +LS SRD T+++W + D+ G
Sbjct: 1 MVQEQMKLTGTLEGHTGWVTQIATYTRNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGR 60
Query: 56 PQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 115
P + L GH+HF+SD+V+SSDG +ALSGSWDKTLRLWDL G +TR+F HTKDVLSVAFS
Sbjct: 61 PVRSLTGHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFS 120
Query: 116 VDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMV 175
DNRQIVS SRDK+IKLWNTLA CK+TI +D H+DWVS VRFSP++++P+IVSAGWD++V
Sbjct: 121 ADNRQIVSGSRDKSIKLWNTLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVV 180
Query: 176 KVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHND 235
KVWNL NC+LK NH GHTGY+NTVTVSPDGSLCASGGKD AMLWDLN+GKHL+TL ND
Sbjct: 181 KVWNLGNCRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLPGND 240
Query: 236 IITALCFSPNR 246
+I A+ FSPNR
Sbjct: 241 VINAMSFSPNR 251
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 74/225 (32%), Positives = 114/225 (50%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
+L GHN +V+ + + LS S D TL +W D N GV ++ H+ + +
Sbjct: 64 SLTGHNHFVSDVVISSD-GQFALSGSWDKTLRLW-----DLNQGVSTRQFISHTKDVLSV 117
Query: 71 VLSSDGNYALSGSWDKTLRLWD-LAAGKTTRRFEDHTKDVLSVAFSVDNRQ--IVSSSRD 127
S+D +SGS DK+++LW+ LA K T + HT V +V FS NR IVS+ D
Sbjct: 118 AFSADNRQIVSGSRDKSIKLWNTLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWD 177
Query: 128 KTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKI 187
K +K+WN L +C+ GH+ +V+ V SP+ + S G D +W+L K
Sbjct: 178 KVVKVWN-LGNCRLKTNHIGHTGYVNTVTVSPD--GSLCASGGKDGQAMLWDLNEGKHLY 234
Query: 188 NHSGHTGYLNTVTVSPDGS-LCASGGKDMNAMLWDLNDGKHLHTL 231
G+ +N ++ SP+ LCA+ G + +WDL D K + L
Sbjct: 235 TLPGND-VINAMSFSPNRYWLCAAVGSSIK--IWDLEDKKEIEEL 276
Score = 222 (83.2 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 64/181 (35%), Positives = 92/181 (50%)
Query: 184 KLKINHSGHTGYLNTVTVSP--DGSLCASGGKDMNAMLWDLND---------GKHLHTLV 232
KL GHTG++ + D + S +D ++WD++ G+ + +L
Sbjct: 7 KLTGTLEGHTGWVTQIATYTRNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLT 66
Query: 233 -HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFS 291
HN ++ + S + F +S + K+ L L+ +N G F S +DVLSVAFS
Sbjct: 67 GHNHFVSDVVISSDGQFA-----LSGSWDKT-LRLWDLNQGVSTRQFISHTKDVLSVAFS 120
Query: 292 VDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADPPMCLSLA 351
DNRQIVS SRDK+IKLWNTLA CK+TI D V +R S S + P+ +S
Sbjct: 121 ADNRQIVSGSRDKSIKLWNTLAQCKYTITDDCHTDWVSTVR---FSPSNR--DPVIVSAG 175
Query: 352 W 352
W
Sbjct: 176 W 176
Score = 201 (75.8 bits), Expect = 1.9e-110, Sum P(2) = 1.9e-110
Identities = 49/114 (42%), Positives = 73/114 (64%)
Query: 265 ILYPINHGKMETPFFSL-FRDVLS-VAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDL 322
+L+ +N GK ++L DV++ ++FS NR + ++ +IK+W DL
Sbjct: 223 MLWDLNEGKH---LYTLPGNDVINAMSFS-PNRYWLCAAVGSSIKIW-----------DL 267
Query: 323 ETKKMVEELRPDVVSQ-STKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVSV 375
E KK +EEL+P++ S S++ P C+SLAWS DGQTLFAGY+DN IRV+QVS+
Sbjct: 268 EDKKEIEELKPEIASSGSSRGSSPQCISLAWSQDGQTLFAGYTDNIIRVYQVSI 321
Score = 156 (60.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 52/190 (27%), Positives = 88/190 (46%)
Query: 140 KFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNC----KLKINH-----S 190
K T +GH+ WV+ + + ++S+ D+ + VW++ + + I +
Sbjct: 7 KLTGTLEGHTGWVTQIATYTRNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLT 66
Query: 191 GHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQ 249
GH +++ V +S DG SG D LWDLN G + H + ++ FS + +
Sbjct: 67 GHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADN--R 124
Query: 250 KIKLDISRTLQKSNLILYPINHGKMETPFFSLFRD-VLSVAFSVDNRQ--IVSSSRDKTI 306
+I +S + KS + + K T D V +V FS NR IVS+ DK +
Sbjct: 125 QI---VSGSRDKSIKLWNTLAQCKY-TITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVV 180
Query: 307 KLWNTLAHCK 316
K+WN L +C+
Sbjct: 181 KVWN-LGNCR 189
>UNIPROTKB|G8JL27 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0001891 "phagocytic
cup" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AADN02030122
Ensembl:ENSGALT00000000171 Uniprot:G8JL27
Length = 320
Score = 1072 (382.4 bits), Expect = 1.9e-108, P = 1.9e-108
Identities = 199/309 (64%), Positives = 236/309 (76%)
Query: 3 TETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKG 62
TE + LRGTL GHNGWVTQIAT P+FPD ILS SRD T+I+WKLTRD+TNYG+PQ+ L+G
Sbjct: 5 TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRG 64
Query: 63 HSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 122
HSHF+SD+V+SSDG +ALSGSWD TLRLWDL G TTRRF HTKDVLSVAFS DNRQIV
Sbjct: 65 HSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIV 124
Query: 123 SSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTN 182
S SRDKTIKLWNTL CK+T+ ++ HS+WVSCVRFSPN NPIIVS GWD++VKVWNL N
Sbjct: 125 SGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN 184
Query: 183 CKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCF 242
CKLK NH GHTGYLNTVTVSPDGSLCASGGKD AMLWDLN+GKHL+TL DII ALCF
Sbjct: 185 CKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCF 244
Query: 243 SPNRSFQKIKLDISRTLQ--KSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSS 300
SPNR + S + + +I+ + + T + S+A+S D + + +
Sbjct: 245 SPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAG 304
Query: 301 SRDKTIKLW 309
D +++W
Sbjct: 305 YTDNLVRVW 313
Score = 218 (81.8 bits), Expect = 3.5e-16, P = 3.5e-16
Identities = 48/115 (41%), Positives = 73/115 (63%)
Query: 265 ILYPINHGKMETPFFSLFR-DVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLE 323
+L+ +N GK ++L D+++ NR + ++ +IK+W DLE
Sbjct: 220 MLWDLNEGKH---LYTLDGGDIINALCFSPNRYWLCAATGPSIKIW-----------DLE 265
Query: 324 TKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVSVTSR 378
K +V+EL+ +V+S S+KA+PP C SLAWS DGQTLFAGY+DN +RVWQV++ +R
Sbjct: 266 GKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGTR 320
Score = 191 (72.3 bits), Expect = 9.4e-13, P = 9.4e-13
Identities = 56/169 (33%), Positives = 81/169 (47%)
Query: 191 GHTGYLNTVTVSPD-GSLCASGGKDMNAMLWDL-----NDGKHLHTLV-HNDIITALCFS 243
GH G++ + +P + S +D ++W L N G L H+ ++ + S
Sbjct: 16 GHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVIS 75
Query: 244 PNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRD 303
+ F +S + L L+ + G F +DVLSVAFS DNRQIVS SRD
Sbjct: 76 SDGQFA-----LSGSWD-GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 129
Query: 304 KTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADPPMCLSLAW 352
KTIKLWNTL CK+T+ D + V +R S + P+ +S W
Sbjct: 130 KTIKLWNTLGVCKYTVQDESHSEWVSCVR-----FSPNSSNPIIVSCGW 173
Score = 156 (60.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 49/177 (27%), Positives = 82/177 (46%)
Query: 147 GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS-----GHTGYLNTVTV 201
GH+ WV+ + +P + +I+SA D+ + +W LT + GH+ +++ V +
Sbjct: 16 GHNGWVTQIATTPQFPD-MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVI 74
Query: 202 SPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HN-DIITALCFSPNRSFQKIKLDISRTL 259
S DG SG D LWDL G V H D+++ S NR D +T+
Sbjct: 75 SSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD--KTI 132
Query: 260 QKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCK 316
+ N + + ++ S + + + + N IVS DK +K+WN LA+CK
Sbjct: 133 KLWNTL--GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWN-LANCK 186
Score = 133 (51.9 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 38/174 (21%), Positives = 77/174 (44%)
Query: 15 HNGWVTQIATNPKFPDTIL-SCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLS 73
H+ WV+ + +P + I+ SC D + +W L N + + GH+ +++ + +S
Sbjct: 150 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA----NCKLKTNHI-GHTGYLNTVTVS 204
Query: 74 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLW 133
DG+ SG D LWDL GK + D+++ NR + ++ +IK+W
Sbjct: 205 PDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINALCFSPNRYWLCAATGPSIKIW 262
Query: 134 NT-----LAHCKFTIVE-DGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT 181
+ + K ++ ++ C + + + + D +V+VW +T
Sbjct: 263 DLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVT 316
>UNIPROTKB|P63247 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0007165 "signal
transduction" evidence=TAS] [GO:0001891 "phagocytic cup"
evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0043547 "positive regulation
of GTPase activity" evidence=IEA] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0007165 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:0030178
GO:GO:2001244 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753
CTD:10399 HOVERGEN:HBG000277 OrthoDB:EOG4933J5 EMBL:M24193
EMBL:AY393848 EMBL:AY694127 EMBL:AB268588 IPI:IPI00596315
PIR:A33928 RefSeq:NP_001004378.1 UniGene:Gga.7066
ProteinModelPortal:P63247 SMR:P63247 STRING:P63247 PRIDE:P63247
GeneID:417044 KEGG:gga:417044 InParanoid:A5HUK6 NextBio:20820423
Uniprot:P63247
Length = 317
Score = 1072 (382.4 bits), Expect = 1.9e-108, P = 1.9e-108
Identities = 199/309 (64%), Positives = 236/309 (76%)
Query: 3 TETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKG 62
TE + LRGTL GHNGWVTQIAT P+FPD ILS SRD T+I+WKLTRD+TNYG+PQ+ L+G
Sbjct: 2 TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRG 61
Query: 63 HSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 122
HSHF+SD+V+SSDG +ALSGSWD TLRLWDL G TTRRF HTKDVLSVAFS DNRQIV
Sbjct: 62 HSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIV 121
Query: 123 SSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTN 182
S SRDKTIKLWNTL CK+T+ ++ HS+WVSCVRFSPN NPIIVS GWD++VKVWNL N
Sbjct: 122 SGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN 181
Query: 183 CKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCF 242
CKLK NH GHTGYLNTVTVSPDGSLCASGGKD AMLWDLN+GKHL+TL DII ALCF
Sbjct: 182 CKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCF 241
Query: 243 SPNRSFQKIKLDISRTLQ--KSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSS 300
SPNR + S + + +I+ + + T + S+A+S D + + +
Sbjct: 242 SPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAG 301
Query: 301 SRDKTIKLW 309
D +++W
Sbjct: 302 YTDNLVRVW 310
Score = 218 (81.8 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 48/115 (41%), Positives = 73/115 (63%)
Query: 265 ILYPINHGKMETPFFSLFR-DVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLE 323
+L+ +N GK ++L D+++ NR + ++ +IK+W DLE
Sbjct: 217 MLWDLNEGKH---LYTLDGGDIINALCFSPNRYWLCAATGPSIKIW-----------DLE 262
Query: 324 TKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVSVTSR 378
K +V+EL+ +V+S S+KA+PP C SLAWS DGQTLFAGY+DN +RVWQV++ +R
Sbjct: 263 GKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGTR 317
Score = 191 (72.3 bits), Expect = 8.9e-13, P = 8.9e-13
Identities = 56/169 (33%), Positives = 81/169 (47%)
Query: 191 GHTGYLNTVTVSPD-GSLCASGGKDMNAMLWDL-----NDGKHLHTLV-HNDIITALCFS 243
GH G++ + +P + S +D ++W L N G L H+ ++ + S
Sbjct: 13 GHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVIS 72
Query: 244 PNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRD 303
+ F +S + L L+ + G F +DVLSVAFS DNRQIVS SRD
Sbjct: 73 SDGQFA-----LSGSWD-GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 304 KTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADPPMCLSLAW 352
KTIKLWNTL CK+T+ D + V +R S + P+ +S W
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVR-----FSPNSSNPIIVSCGW 170
Score = 156 (60.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 49/177 (27%), Positives = 82/177 (46%)
Query: 147 GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS-----GHTGYLNTVTV 201
GH+ WV+ + +P + +I+SA D+ + +W LT + GH+ +++ V +
Sbjct: 13 GHNGWVTQIATTPQFPD-MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVI 71
Query: 202 SPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HN-DIITALCFSPNRSFQKIKLDISRTL 259
S DG SG D LWDL G V H D+++ S NR D +T+
Sbjct: 72 SSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD--KTI 129
Query: 260 QKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCK 316
+ N + + ++ S + + + + N IVS DK +K+WN LA+CK
Sbjct: 130 KLWNTL--GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWN-LANCK 183
Score = 133 (51.9 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 38/174 (21%), Positives = 77/174 (44%)
Query: 15 HNGWVTQIATNPKFPDTIL-SCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLS 73
H+ WV+ + +P + I+ SC D + +W L N + + GH+ +++ + +S
Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA----NCKLKTNHI-GHTGYLNTVTVS 201
Query: 74 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLW 133
DG+ SG D LWDL GK + D+++ NR + ++ +IK+W
Sbjct: 202 PDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINALCFSPNRYWLCAATGPSIKIW 259
Query: 134 NT-----LAHCKFTIVE-DGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT 181
+ + K ++ ++ C + + + + D +V+VW +T
Sbjct: 260 DLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVT 313
>UNIPROTKB|P63243 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9913 "Bos taurus" [GO:0030971 "receptor
tyrosine kinase binding" evidence=ISS] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=ISS] [GO:0050765
"negative regulation of phagocytosis" evidence=ISS] [GO:0043547
"positive regulation of GTPase activity" evidence=ISS] [GO:0043065
"positive regulation of apoptotic process" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0001891 "phagocytic cup" evidence=ISS] [GO:0042169 "SH2 domain
binding" evidence=ISS] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=ISS] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0030335 "positive regulation of cell migration" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:2000543 "positive regulation of gastrulation"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0043025 "neuronal cell body" evidence=ISS]
[GO:0043204 "perikaryon" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:0019903 "protein phosphatase
binding" evidence=IEA] [GO:0008656 "cysteine-type endopeptidase
activator activity involved in apoptotic process" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AJ132860 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0030971 GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
GO:GO:0032464 GO:GO:2000114 GO:GO:0051302 GO:GO:2000543
GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
EMBL:BC102286 IPI:IPI00700792 RefSeq:NP_786996.1 UniGene:Bt.2981
ProteinModelPortal:P63243 SMR:P63243 STRING:P63243 PRIDE:P63243
Ensembl:ENSBTAT00000026183 GeneID:327682 KEGG:bta:327682 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 InParanoid:P63243
OrthoDB:EOG4933J5 NextBio:20810147 ArrayExpress:P63243
Uniprot:P63243
Length = 317
Score = 1072 (382.4 bits), Expect = 1.9e-108, P = 1.9e-108
Identities = 199/309 (64%), Positives = 236/309 (76%)
Query: 3 TETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKG 62
TE + LRGTL GHNGWVTQIAT P+FPD ILS SRD T+I+WKLTRD+TNYG+PQ+ L+G
Sbjct: 2 TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRG 61
Query: 63 HSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 122
HSHF+SD+V+SSDG +ALSGSWD TLRLWDL G TTRRF HTKDVLSVAFS DNRQIV
Sbjct: 62 HSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIV 121
Query: 123 SSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTN 182
S SRDKTIKLWNTL CK+T+ ++ HS+WVSCVRFSPN NPIIVS GWD++VKVWNL N
Sbjct: 122 SGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN 181
Query: 183 CKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCF 242
CKLK NH GHTGYLNTVTVSPDGSLCASGGKD AMLWDLN+GKHL+TL DII ALCF
Sbjct: 182 CKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCF 241
Query: 243 SPNRSFQKIKLDISRTLQ--KSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSS 300
SPNR + S + + +I+ + + T + S+A+S D + + +
Sbjct: 242 SPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAG 301
Query: 301 SRDKTIKLW 309
D +++W
Sbjct: 302 YTDNLVRVW 310
Score = 218 (81.8 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 48/115 (41%), Positives = 73/115 (63%)
Query: 265 ILYPINHGKMETPFFSLFR-DVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLE 323
+L+ +N GK ++L D+++ NR + ++ +IK+W DLE
Sbjct: 217 MLWDLNEGKH---LYTLDGGDIINALCFSPNRYWLCAATGPSIKIW-----------DLE 262
Query: 324 TKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVSVTSR 378
K +V+EL+ +V+S S+KA+PP C SLAWS DGQTLFAGY+DN +RVWQV++ +R
Sbjct: 263 GKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGTR 317
Score = 191 (72.3 bits), Expect = 8.9e-13, P = 8.9e-13
Identities = 56/169 (33%), Positives = 81/169 (47%)
Query: 191 GHTGYLNTVTVSPD-GSLCASGGKDMNAMLWDL-----NDGKHLHTLV-HNDIITALCFS 243
GH G++ + +P + S +D ++W L N G L H+ ++ + S
Sbjct: 13 GHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVIS 72
Query: 244 PNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRD 303
+ F +S + L L+ + G F +DVLSVAFS DNRQIVS SRD
Sbjct: 73 SDGQFA-----LSGSWD-GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 304 KTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADPPMCLSLAW 352
KTIKLWNTL CK+T+ D + V +R S + P+ +S W
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVR-----FSPNSSNPIIVSCGW 170
Score = 156 (60.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 49/177 (27%), Positives = 82/177 (46%)
Query: 147 GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS-----GHTGYLNTVTV 201
GH+ WV+ + +P + +I+SA D+ + +W LT + GH+ +++ V +
Sbjct: 13 GHNGWVTQIATTPQFPD-MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVI 71
Query: 202 SPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HN-DIITALCFSPNRSFQKIKLDISRTL 259
S DG SG D LWDL G V H D+++ S NR D +T+
Sbjct: 72 SSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD--KTI 129
Query: 260 QKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCK 316
+ N + + ++ S + + + + N IVS DK +K+WN LA+CK
Sbjct: 130 KLWNTL--GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWN-LANCK 183
Score = 133 (51.9 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 38/174 (21%), Positives = 77/174 (44%)
Query: 15 HNGWVTQIATNPKFPDTIL-SCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLS 73
H+ WV+ + +P + I+ SC D + +W L N + + GH+ +++ + +S
Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA----NCKLKTNHI-GHTGYLNTVTVS 201
Query: 74 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLW 133
DG+ SG D LWDL GK + D+++ NR + ++ +IK+W
Sbjct: 202 PDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINALCFSPNRYWLCAATGPSIKIW 259
Query: 134 NT-----LAHCKFTIVE-DGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT 181
+ + K ++ ++ C + + + + D +V+VW +T
Sbjct: 260 DLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVT 313
>UNIPROTKB|F1PLR0 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001244 "positive regulation of intrinsic
apoptotic signaling pathway" evidence=IEA] [GO:0051898 "negative
regulation of protein kinase B signaling cascade" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0050765
"negative regulation of phagocytosis" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0043547
"positive regulation of GTPase activity" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0032464 "positive regulation of
protein homooligomerization" evidence=IEA] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030971 "receptor tyrosine kinase
binding" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IEA] [GO:0019903
"protein phosphatase binding" evidence=IEA] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IEA] [GO:0008200 "ion channel inhibitor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=IEA] [GO:0001891 "phagocytic cup" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AAEX03007665
ProteinModelPortal:F1PLR0 Ensembl:ENSCAFT00000020233 Uniprot:F1PLR0
Length = 317
Score = 1072 (382.4 bits), Expect = 1.9e-108, P = 1.9e-108
Identities = 199/309 (64%), Positives = 236/309 (76%)
Query: 3 TETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKG 62
TE + LRGTL GHNGWVTQIAT P+FPD ILS SRD T+I+WKLTRD+TNYG+PQ+ L+G
Sbjct: 2 TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRG 61
Query: 63 HSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 122
HSHF+SD+V+SSDG +ALSGSWD TLRLWDL G TTRRF HTKDVLSVAFS DNRQIV
Sbjct: 62 HSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIV 121
Query: 123 SSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTN 182
S SRDKTIKLWNTL CK+T+ ++ HS+WVSCVRFSPN NPIIVS GWD++VKVWNL N
Sbjct: 122 SGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN 181
Query: 183 CKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCF 242
CKLK NH GHTGYLNTVTVSPDGSLCASGGKD AMLWDLN+GKHL+TL DII ALCF
Sbjct: 182 CKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCF 241
Query: 243 SPNRSFQKIKLDISRTLQ--KSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSS 300
SPNR + S + + +I+ + + T + S+A+S D + + +
Sbjct: 242 SPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAG 301
Query: 301 SRDKTIKLW 309
D +++W
Sbjct: 302 YTDNLVRVW 310
Score = 218 (81.8 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 48/115 (41%), Positives = 73/115 (63%)
Query: 265 ILYPINHGKMETPFFSLFR-DVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLE 323
+L+ +N GK ++L D+++ NR + ++ +IK+W DLE
Sbjct: 217 MLWDLNEGKH---LYTLDGGDIINALCFSPNRYWLCAATGPSIKIW-----------DLE 262
Query: 324 TKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVSVTSR 378
K +V+EL+ +V+S S+KA+PP C SLAWS DGQTLFAGY+DN +RVWQV++ +R
Sbjct: 263 GKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGTR 317
Score = 191 (72.3 bits), Expect = 8.9e-13, P = 8.9e-13
Identities = 56/169 (33%), Positives = 81/169 (47%)
Query: 191 GHTGYLNTVTVSPD-GSLCASGGKDMNAMLWDL-----NDGKHLHTLV-HNDIITALCFS 243
GH G++ + +P + S +D ++W L N G L H+ ++ + S
Sbjct: 13 GHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVIS 72
Query: 244 PNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRD 303
+ F +S + L L+ + G F +DVLSVAFS DNRQIVS SRD
Sbjct: 73 SDGQFA-----LSGSWD-GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 304 KTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADPPMCLSLAW 352
KTIKLWNTL CK+T+ D + V +R S + P+ +S W
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVR-----FSPNSSNPIIVSCGW 170
Score = 156 (60.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 49/177 (27%), Positives = 82/177 (46%)
Query: 147 GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS-----GHTGYLNTVTV 201
GH+ WV+ + +P + +I+SA D+ + +W LT + GH+ +++ V +
Sbjct: 13 GHNGWVTQIATTPQFPD-MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVI 71
Query: 202 SPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HN-DIITALCFSPNRSFQKIKLDISRTL 259
S DG SG D LWDL G V H D+++ S NR D +T+
Sbjct: 72 SSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD--KTI 129
Query: 260 QKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCK 316
+ N + + ++ S + + + + N IVS DK +K+WN LA+CK
Sbjct: 130 KLWNTL--GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWN-LANCK 183
Score = 133 (51.9 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 38/174 (21%), Positives = 77/174 (44%)
Query: 15 HNGWVTQIATNPKFPDTIL-SCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLS 73
H+ WV+ + +P + I+ SC D + +W L N + + GH+ +++ + +S
Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA----NCKLKTNHI-GHTGYLNTVTVS 201
Query: 74 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLW 133
DG+ SG D LWDL GK + D+++ NR + ++ +IK+W
Sbjct: 202 PDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINALCFSPNRYWLCAATGPSIKIW 259
Query: 134 NT-----LAHCKFTIVE-DGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT 181
+ + K ++ ++ C + + + + D +V+VW +T
Sbjct: 260 DLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVT 313
>UNIPROTKB|P63244 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0090003 "regulation of establishment of
protein localization to plasma membrane" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0043204 "perikaryon" evidence=IEA]
[GO:0005102 "receptor binding" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0019903 "protein phosphatase binding"
evidence=IPI] [GO:0030496 "midbody" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=ISS] [GO:0042169 "SH2 domain binding"
evidence=IDA] [GO:0030971 "receptor tyrosine kinase binding"
evidence=IDA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IDA] [GO:0030308 "negative regulation of cell
growth" evidence=IDA] [GO:0051726 "regulation of cell cycle"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IDA] [GO:0015935 "small ribosomal
subunit" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=IDA] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=IDA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP;IDA] [GO:0030335 "positive regulation of cell
migration" evidence=IDA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IDA] [GO:0001891 "phagocytic cup" evidence=IDA]
[GO:0050765 "negative regulation of phagocytosis" evidence=IMP]
[GO:0008200 "ion channel inhibitor activity" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=IMP] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=IMP] [GO:0051898 "negative regulation
of protein kinase B signaling cascade" evidence=IMP] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IMP] [GO:0017148 "negative regulation
of translation" evidence=ISS] [GO:0061099 "negative regulation of
protein tyrosine kinase activity" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
Pathway_Interaction_DB:igf1_pathway GO:GO:0019048 GO:GO:0005080
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511 GO:GO:0007049
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0042169
Pathway_Interaction_DB:tnfpathway GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0008656 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0030971
GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
Pathway_Interaction_DB:hif1apathway EMBL:CH471165 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:0051898 GO:GO:2000543
GO:GO:0030292 KO:K14753 OMA:IRVWQVM CTD:10399 HOVERGEN:HBG000277
ChiTaRS:GNB2L1 EMBL:M24194 EMBL:AY159316 EMBL:AY336089
EMBL:AK095666 EMBL:CR456978 EMBL:CR541909 EMBL:AK222488
EMBL:BC000214 EMBL:BC000366 EMBL:BC010119 EMBL:BC014256
EMBL:BC014788 EMBL:BC017287 EMBL:BC019093 EMBL:BC019362
EMBL:BC021993 EMBL:BC032006 IPI:IPI00848226 PIR:B33928
RefSeq:NP_006089.1 UniGene:Hs.5662 PDB:4AOW PDBsum:4AOW
ProteinModelPortal:P63244 SMR:P63244 IntAct:P63244 MINT:MINT-105673
STRING:P63244 PhosphoSite:P63244 DMDM:54037168
REPRODUCTION-2DPAGE:IPI00848226 REPRODUCTION-2DPAGE:P63244
PaxDb:P63244 PRIDE:P63244 DNASU:10399 Ensembl:ENST00000512805
GeneID:10399 KEGG:hsa:10399 UCSC:uc003mni.1 GeneCards:GC05M180663
HGNC:HGNC:4399 HPA:CAB004288 HPA:HPA021676 MIM:176981
neXtProt:NX_P63244 PharmGKB:PA28779 InParanoid:P63244
GenomeRNAi:10399 NextBio:39404 ArrayExpress:P63244 Bgee:P63244
CleanEx:HS_GNB2L1 Genevestigator:P63244 GermOnline:ENSG00000204628
GO:GO:0015935 Uniprot:P63244
Length = 317
Score = 1072 (382.4 bits), Expect = 1.9e-108, P = 1.9e-108
Identities = 199/309 (64%), Positives = 236/309 (76%)
Query: 3 TETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKG 62
TE + LRGTL GHNGWVTQIAT P+FPD ILS SRD T+I+WKLTRD+TNYG+PQ+ L+G
Sbjct: 2 TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRG 61
Query: 63 HSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 122
HSHF+SD+V+SSDG +ALSGSWD TLRLWDL G TTRRF HTKDVLSVAFS DNRQIV
Sbjct: 62 HSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIV 121
Query: 123 SSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTN 182
S SRDKTIKLWNTL CK+T+ ++ HS+WVSCVRFSPN NPIIVS GWD++VKVWNL N
Sbjct: 122 SGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN 181
Query: 183 CKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCF 242
CKLK NH GHTGYLNTVTVSPDGSLCASGGKD AMLWDLN+GKHL+TL DII ALCF
Sbjct: 182 CKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCF 241
Query: 243 SPNRSFQKIKLDISRTLQ--KSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSS 300
SPNR + S + + +I+ + + T + S+A+S D + + +
Sbjct: 242 SPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAG 301
Query: 301 SRDKTIKLW 309
D +++W
Sbjct: 302 YTDNLVRVW 310
Score = 218 (81.8 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 48/115 (41%), Positives = 73/115 (63%)
Query: 265 ILYPINHGKMETPFFSLFR-DVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLE 323
+L+ +N GK ++L D+++ NR + ++ +IK+W DLE
Sbjct: 217 MLWDLNEGKH---LYTLDGGDIINALCFSPNRYWLCAATGPSIKIW-----------DLE 262
Query: 324 TKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVSVTSR 378
K +V+EL+ +V+S S+KA+PP C SLAWS DGQTLFAGY+DN +RVWQV++ +R
Sbjct: 263 GKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGTR 317
Score = 191 (72.3 bits), Expect = 8.9e-13, P = 8.9e-13
Identities = 56/169 (33%), Positives = 81/169 (47%)
Query: 191 GHTGYLNTVTVSPD-GSLCASGGKDMNAMLWDL-----NDGKHLHTLV-HNDIITALCFS 243
GH G++ + +P + S +D ++W L N G L H+ ++ + S
Sbjct: 13 GHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVIS 72
Query: 244 PNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRD 303
+ F +S + L L+ + G F +DVLSVAFS DNRQIVS SRD
Sbjct: 73 SDGQFA-----LSGSWD-GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 304 KTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADPPMCLSLAW 352
KTIKLWNTL CK+T+ D + V +R S + P+ +S W
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVR-----FSPNSSNPIIVSCGW 170
Score = 156 (60.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 49/177 (27%), Positives = 82/177 (46%)
Query: 147 GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS-----GHTGYLNTVTV 201
GH+ WV+ + +P + +I+SA D+ + +W LT + GH+ +++ V +
Sbjct: 13 GHNGWVTQIATTPQFPD-MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVI 71
Query: 202 SPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HN-DIITALCFSPNRSFQKIKLDISRTL 259
S DG SG D LWDL G V H D+++ S NR D +T+
Sbjct: 72 SSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD--KTI 129
Query: 260 QKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCK 316
+ N + + ++ S + + + + N IVS DK +K+WN LA+CK
Sbjct: 130 KLWNTL--GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWN-LANCK 183
Score = 133 (51.9 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 38/174 (21%), Positives = 77/174 (44%)
Query: 15 HNGWVTQIATNPKFPDTIL-SCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLS 73
H+ WV+ + +P + I+ SC D + +W L N + + GH+ +++ + +S
Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA----NCKLKTNHI-GHTGYLNTVTVS 201
Query: 74 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLW 133
DG+ SG D LWDL GK + D+++ NR + ++ +IK+W
Sbjct: 202 PDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINALCFSPNRYWLCAATGPSIKIW 259
Query: 134 NT-----LAHCKFTIVE-DGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT 181
+ + K ++ ++ C + + + + D +V+VW +T
Sbjct: 260 DLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVT 313
>UNIPROTKB|P63246 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISS]
[GO:0005080 "protein kinase C binding" evidence=ISS] [GO:0030496
"midbody" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0001891 "phagocytic cup"
evidence=ISS] [GO:0042169 "SH2 domain binding" evidence=ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0050765 "negative regulation of phagocytosis" evidence=ISS]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISS]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISS] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISS] [GO:0032436 "positive regulation
of proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:0051302
"regulation of cell division" evidence=ISS] [GO:0032880 "regulation
of protein localization" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0006417 "regulation of translation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511
GO:GO:0007049 GO:GO:0043065 GO:GO:0051726 GO:GO:0001891
GO:GO:0042169 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0030971 GO:GO:0030178
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 KO:K14753 CTD:10399 HOVERGEN:HBG000277
EMBL:Z33879 EMBL:AF146043 PIR:S45054 RefSeq:NP_999497.1
UniGene:Ssc.12515 ProteinModelPortal:P63246 SMR:P63246 PRIDE:P63246
GeneID:397605 KEGG:ssc:397605 Uniprot:P63246
Length = 317
Score = 1072 (382.4 bits), Expect = 1.9e-108, P = 1.9e-108
Identities = 199/309 (64%), Positives = 236/309 (76%)
Query: 3 TETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKG 62
TE + LRGTL GHNGWVTQIAT P+FPD ILS SRD T+I+WKLTRD+TNYG+PQ+ L+G
Sbjct: 2 TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRG 61
Query: 63 HSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 122
HSHF+SD+V+SSDG +ALSGSWD TLRLWDL G TTRRF HTKDVLSVAFS DNRQIV
Sbjct: 62 HSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIV 121
Query: 123 SSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTN 182
S SRDKTIKLWNTL CK+T+ ++ HS+WVSCVRFSPN NPIIVS GWD++VKVWNL N
Sbjct: 122 SGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN 181
Query: 183 CKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCF 242
CKLK NH GHTGYLNTVTVSPDGSLCASGGKD AMLWDLN+GKHL+TL DII ALCF
Sbjct: 182 CKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCF 241
Query: 243 SPNRSFQKIKLDISRTLQ--KSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSS 300
SPNR + S + + +I+ + + T + S+A+S D + + +
Sbjct: 242 SPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAG 301
Query: 301 SRDKTIKLW 309
D +++W
Sbjct: 302 YTDNLVRVW 310
Score = 218 (81.8 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 48/115 (41%), Positives = 73/115 (63%)
Query: 265 ILYPINHGKMETPFFSLFR-DVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLE 323
+L+ +N GK ++L D+++ NR + ++ +IK+W DLE
Sbjct: 217 MLWDLNEGKH---LYTLDGGDIINALCFSPNRYWLCAATGPSIKIW-----------DLE 262
Query: 324 TKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVSVTSR 378
K +V+EL+ +V+S S+KA+PP C SLAWS DGQTLFAGY+DN +RVWQV++ +R
Sbjct: 263 GKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGTR 317
Score = 191 (72.3 bits), Expect = 8.9e-13, P = 8.9e-13
Identities = 56/169 (33%), Positives = 81/169 (47%)
Query: 191 GHTGYLNTVTVSPD-GSLCASGGKDMNAMLWDL-----NDGKHLHTLV-HNDIITALCFS 243
GH G++ + +P + S +D ++W L N G L H+ ++ + S
Sbjct: 13 GHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVIS 72
Query: 244 PNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRD 303
+ F +S + L L+ + G F +DVLSVAFS DNRQIVS SRD
Sbjct: 73 SDGQFA-----LSGSWD-GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 304 KTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADPPMCLSLAW 352
KTIKLWNTL CK+T+ D + V +R S + P+ +S W
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVR-----FSPNSSNPIIVSCGW 170
Score = 156 (60.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 49/177 (27%), Positives = 82/177 (46%)
Query: 147 GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS-----GHTGYLNTVTV 201
GH+ WV+ + +P + +I+SA D+ + +W LT + GH+ +++ V +
Sbjct: 13 GHNGWVTQIATTPQFPD-MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVI 71
Query: 202 SPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HN-DIITALCFSPNRSFQKIKLDISRTL 259
S DG SG D LWDL G V H D+++ S NR D +T+
Sbjct: 72 SSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD--KTI 129
Query: 260 QKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCK 316
+ N + + ++ S + + + + N IVS DK +K+WN LA+CK
Sbjct: 130 KLWNTL--GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWN-LANCK 183
Score = 133 (51.9 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 38/174 (21%), Positives = 77/174 (44%)
Query: 15 HNGWVTQIATNPKFPDTIL-SCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLS 73
H+ WV+ + +P + I+ SC D + +W L N + + GH+ +++ + +S
Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA----NCKLKTNHI-GHTGYLNTVTVS 201
Query: 74 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLW 133
DG+ SG D LWDL GK + D+++ NR + ++ +IK+W
Sbjct: 202 PDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINALCFSPNRYWLCAATGPSIKIW 259
Query: 134 NT-----LAHCKFTIVE-DGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT 181
+ + K ++ ++ C + + + + D +V+VW +T
Sbjct: 260 DLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVT 313
>UNIPROTKB|B1N1C2 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9103
"Meleagris gallopavo" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
EMBL:DQ993255 RefSeq:XP_003211191.1 UniGene:Mga.4509
ProteinModelPortal:B1N1C2 SMR:B1N1C2 PRIDE:B1N1C2
Ensembl:ENSMGAT00000000634 GeneID:100541375 KEGG:mgp:100541375
Uniprot:B1N1C2
Length = 317
Score = 1072 (382.4 bits), Expect = 1.9e-108, P = 1.9e-108
Identities = 199/309 (64%), Positives = 236/309 (76%)
Query: 3 TETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKG 62
TE + LRGTL GHNGWVTQIAT P+FPD ILS SRD T+I+WKLTRD+TNYG+PQ+ L+G
Sbjct: 2 TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRG 61
Query: 63 HSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 122
HSHF+SD+V+SSDG +ALSGSWD TLRLWDL G TTRRF HTKDVLSVAFS DNRQIV
Sbjct: 62 HSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIV 121
Query: 123 SSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTN 182
S SRDKTIKLWNTL CK+T+ ++ HS+WVSCVRFSPN NPIIVS GWD++VKVWNL N
Sbjct: 122 SGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN 181
Query: 183 CKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCF 242
CKLK NH GHTGYLNTVTVSPDGSLCASGGKD AMLWDLN+GKHL+TL DII ALCF
Sbjct: 182 CKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCF 241
Query: 243 SPNRSFQKIKLDISRTLQ--KSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSS 300
SPNR + S + + +I+ + + T + S+A+S D + + +
Sbjct: 242 SPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAG 301
Query: 301 SRDKTIKLW 309
D +++W
Sbjct: 302 YTDNLVRVW 310
Score = 218 (81.8 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 48/115 (41%), Positives = 73/115 (63%)
Query: 265 ILYPINHGKMETPFFSLFR-DVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLE 323
+L+ +N GK ++L D+++ NR + ++ +IK+W DLE
Sbjct: 217 MLWDLNEGKH---LYTLDGGDIINALCFSPNRYWLCAATGPSIKIW-----------DLE 262
Query: 324 TKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVSVTSR 378
K +V+EL+ +V+S S+KA+PP C SLAWS DGQTLFAGY+DN +RVWQV++ +R
Sbjct: 263 GKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGTR 317
Score = 191 (72.3 bits), Expect = 8.9e-13, P = 8.9e-13
Identities = 56/169 (33%), Positives = 81/169 (47%)
Query: 191 GHTGYLNTVTVSPD-GSLCASGGKDMNAMLWDL-----NDGKHLHTLV-HNDIITALCFS 243
GH G++ + +P + S +D ++W L N G L H+ ++ + S
Sbjct: 13 GHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVIS 72
Query: 244 PNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRD 303
+ F +S + L L+ + G F +DVLSVAFS DNRQIVS SRD
Sbjct: 73 SDGQFA-----LSGSWD-GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 304 KTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADPPMCLSLAW 352
KTIKLWNTL CK+T+ D + V +R S + P+ +S W
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVR-----FSPNSSNPIIVSCGW 170
Score = 156 (60.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 49/177 (27%), Positives = 82/177 (46%)
Query: 147 GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS-----GHTGYLNTVTV 201
GH+ WV+ + +P + +I+SA D+ + +W LT + GH+ +++ V +
Sbjct: 13 GHNGWVTQIATTPQFPD-MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVI 71
Query: 202 SPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HN-DIITALCFSPNRSFQKIKLDISRTL 259
S DG SG D LWDL G V H D+++ S NR D +T+
Sbjct: 72 SSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD--KTI 129
Query: 260 QKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCK 316
+ N + + ++ S + + + + N IVS DK +K+WN LA+CK
Sbjct: 130 KLWNTL--GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWN-LANCK 183
Score = 133 (51.9 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 38/174 (21%), Positives = 77/174 (44%)
Query: 15 HNGWVTQIATNPKFPDTIL-SCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLS 73
H+ WV+ + +P + I+ SC D + +W L N + + GH+ +++ + +S
Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA----NCKLKTNHI-GHTGYLNTVTVS 201
Query: 74 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLW 133
DG+ SG D LWDL GK + D+++ NR + ++ +IK+W
Sbjct: 202 PDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINALCFSPNRYWLCAATGPSIKIW 259
Query: 134 NT-----LAHCKFTIVE-DGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT 181
+ + K ++ ++ C + + + + D +V+VW +T
Sbjct: 260 DLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVT 313
>UNIPROTKB|Q4R7Y4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9541 "Macaca fascicularis" [GO:0001891
"phagocytic cup" evidence=ISS] [GO:0001934 "positive regulation of
protein phosphorylation" evidence=ISS] [GO:0005080 "protein kinase
C binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0030971
"receptor tyrosine kinase binding" evidence=ISS] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=ISS] [GO:0032880
"regulation of protein localization" evidence=ISS] [GO:0042169 "SH2
domain binding" evidence=ISS] [GO:0043025 "neuronal cell body"
evidence=ISS] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISS] [GO:0043547 "positive regulation of GTPase
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0050765 "negative regulation of
phagocytosis" evidence=ISS] [GO:0051302 "regulation of cell
division" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0006417 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0030971 GO:GO:0030178 GO:GO:0007369 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 GO:GO:0030292
HOVERGEN:HBG000277 EMBL:AB168677 ProteinModelPortal:Q4R7Y4
SMR:Q4R7Y4 PRIDE:Q4R7Y4 Uniprot:Q4R7Y4
Length = 317
Score = 1072 (382.4 bits), Expect = 1.9e-108, P = 1.9e-108
Identities = 199/309 (64%), Positives = 236/309 (76%)
Query: 3 TETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKG 62
TE + LRGTL GHNGWVTQIAT P+FPD ILS SRD T+I+WKLTRD+TNYG+PQ+ L+G
Sbjct: 2 TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRG 61
Query: 63 HSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 122
HSHF+SD+V+SSDG +ALSGSWD TLRLWDL G TTRRF HTKDVLSVAFS DNRQIV
Sbjct: 62 HSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIV 121
Query: 123 SSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTN 182
S SRDKTIKLWNTL CK+T+ ++ HS+WVSCVRFSPN NPIIVS GWD++VKVWNL N
Sbjct: 122 SGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN 181
Query: 183 CKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCF 242
CKLK NH GHTGYLNTVTVSPDGSLCASGGKD AMLWDLN+GKHL+TL DII ALCF
Sbjct: 182 CKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCF 241
Query: 243 SPNRSFQKIKLDISRTLQ--KSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSS 300
SPNR + S + + +I+ + + T + S+A+S D + + +
Sbjct: 242 SPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAG 301
Query: 301 SRDKTIKLW 309
D +++W
Sbjct: 302 YTDNLVRVW 310
Score = 218 (81.8 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 48/115 (41%), Positives = 73/115 (63%)
Query: 265 ILYPINHGKMETPFFSLFR-DVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLE 323
+L+ +N GK ++L D+++ NR + ++ +IK+W DLE
Sbjct: 217 MLWDLNEGKH---LYTLDGGDIINALCFSPNRYWLCAATGPSIKIW-----------DLE 262
Query: 324 TKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVSVTSR 378
K +V+EL+ +V+S S+KA+PP C SLAWS DGQTLFAGY+DN +RVWQV++ +R
Sbjct: 263 GKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGTR 317
Score = 191 (72.3 bits), Expect = 8.9e-13, P = 8.9e-13
Identities = 56/169 (33%), Positives = 81/169 (47%)
Query: 191 GHTGYLNTVTVSPD-GSLCASGGKDMNAMLWDL-----NDGKHLHTLV-HNDIITALCFS 243
GH G++ + +P + S +D ++W L N G L H+ ++ + S
Sbjct: 13 GHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVIS 72
Query: 244 PNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRD 303
+ F +S + L L+ + G F +DVLSVAFS DNRQIVS SRD
Sbjct: 73 SDGQFA-----LSGSWD-GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 304 KTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADPPMCLSLAW 352
KTIKLWNTL CK+T+ D + V +R S + P+ +S W
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVR-----FSPNSSNPIIVSCGW 170
Score = 156 (60.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 49/177 (27%), Positives = 82/177 (46%)
Query: 147 GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS-----GHTGYLNTVTV 201
GH+ WV+ + +P + +I+SA D+ + +W LT + GH+ +++ V +
Sbjct: 13 GHNGWVTQIATTPQFPD-MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVI 71
Query: 202 SPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HN-DIITALCFSPNRSFQKIKLDISRTL 259
S DG SG D LWDL G V H D+++ S NR D +T+
Sbjct: 72 SSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD--KTI 129
Query: 260 QKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCK 316
+ N + + ++ S + + + + N IVS DK +K+WN LA+CK
Sbjct: 130 KLWNTL--GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWN-LANCK 183
Score = 133 (51.9 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 38/174 (21%), Positives = 77/174 (44%)
Query: 15 HNGWVTQIATNPKFPDTIL-SCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLS 73
H+ WV+ + +P + I+ SC D + +W L N + + GH+ +++ + +S
Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA----NCKLKTNHI-GHTGYLNTVTVS 201
Query: 74 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLW 133
DG+ SG D LWDL GK + D+++ NR + ++ +IK+W
Sbjct: 202 PDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINALCFSPNRYWLCAATGPSIKIW 259
Query: 134 NT-----LAHCKFTIVE-DGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT 181
+ + K ++ ++ C + + + + D +V+VW +T
Sbjct: 260 DLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVT 313
>UNIPROTKB|Q5U275 [details] [associations]
symbol:gnb2l1 "LOC495666 protein" species:8355 "Xenopus
laevis" [GO:0005737 "cytoplasm" evidence=ISS] [GO:0043025 "neuronal
cell body" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 KO:K14753 HOVERGEN:HBG000277 EMBL:BC086231
RefSeq:NP_001088625.1 UniGene:Xl.49445 ProteinModelPortal:Q5U275
SMR:Q5U275 PRIDE:Q5U275 GeneID:495666 KEGG:xla:495666
Xenbase:XB-GENE-5927586 Uniprot:Q5U275
Length = 317
Score = 1072 (382.4 bits), Expect = 1.9e-108, P = 1.9e-108
Identities = 199/309 (64%), Positives = 236/309 (76%)
Query: 3 TETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKG 62
TE + LRGTL GHNGWVTQIAT P+FPD ILS SRD T+I+WKLTRD+TNYG+PQ+ L+G
Sbjct: 2 TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRG 61
Query: 63 HSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 122
HSHF+SD+V+SSDG +ALSGSWD TLRLWDL G TTRRF HTKDVLSVAFS DNRQIV
Sbjct: 62 HSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIV 121
Query: 123 SSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTN 182
S SRDKTIKLWNTL CK+T+ ++ HS+WVSCVRFSPN NPIIVS GWD++VKVWNL N
Sbjct: 122 SGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN 181
Query: 183 CKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCF 242
CKLK NH GHTGYLNTVTVSPDGSLCASGGKD AMLWDLN+GKHL+TL DII ALCF
Sbjct: 182 CKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCF 241
Query: 243 SPNRSFQKIKLDISRTLQ--KSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSS 300
SPNR + S + + +I+ + + T + S+A+S D + + +
Sbjct: 242 SPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAG 301
Query: 301 SRDKTIKLW 309
D +++W
Sbjct: 302 YTDNLVRVW 310
Score = 218 (81.8 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 48/115 (41%), Positives = 73/115 (63%)
Query: 265 ILYPINHGKMETPFFSLFR-DVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLE 323
+L+ +N GK ++L D+++ NR + ++ +IK+W DLE
Sbjct: 217 MLWDLNEGKH---LYTLDGGDIINALCFSPNRYWLCAATGPSIKIW-----------DLE 262
Query: 324 TKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVSVTSR 378
K +V+EL+ +V+S S+KA+PP C SLAWS DGQTLFAGY+DN +RVWQV++ +R
Sbjct: 263 GKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGTR 317
Score = 191 (72.3 bits), Expect = 8.9e-13, P = 8.9e-13
Identities = 56/169 (33%), Positives = 81/169 (47%)
Query: 191 GHTGYLNTVTVSPD-GSLCASGGKDMNAMLWDL-----NDGKHLHTLV-HNDIITALCFS 243
GH G++ + +P + S +D ++W L N G L H+ ++ + S
Sbjct: 13 GHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVIS 72
Query: 244 PNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRD 303
+ F +S + L L+ + G F +DVLSVAFS DNRQIVS SRD
Sbjct: 73 SDGQFA-----LSGSWD-GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 304 KTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADPPMCLSLAW 352
KTIKLWNTL CK+T+ D + V +R S + P+ +S W
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVR-----FSPNSSNPIIVSCGW 170
Score = 156 (60.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 49/177 (27%), Positives = 82/177 (46%)
Query: 147 GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS-----GHTGYLNTVTV 201
GH+ WV+ + +P + +I+SA D+ + +W LT + GH+ +++ V +
Sbjct: 13 GHNGWVTQIATTPQFPD-MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVI 71
Query: 202 SPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HN-DIITALCFSPNRSFQKIKLDISRTL 259
S DG SG D LWDL G V H D+++ S NR D +T+
Sbjct: 72 SSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD--KTI 129
Query: 260 QKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCK 316
+ N + + ++ S + + + + N IVS DK +K+WN LA+CK
Sbjct: 130 KLWNTL--GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWN-LANCK 183
Score = 133 (51.9 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 38/174 (21%), Positives = 77/174 (44%)
Query: 15 HNGWVTQIATNPKFPDTIL-SCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLS 73
H+ WV+ + +P + I+ SC D + +W L N + + GH+ +++ + +S
Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA----NCKLKTNHI-GHTGYLNTVTVS 201
Query: 74 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLW 133
DG+ SG D LWDL GK + D+++ NR + ++ +IK+W
Sbjct: 202 PDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINALCFSPNRYWLCAATGPSIKIW 259
Query: 134 NT-----LAHCKFTIVE-DGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT 181
+ + K ++ ++ C + + + + D +V+VW +T
Sbjct: 260 DLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVT 313
>MGI|MGI:101849 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2 like 1" species:10090 "Mus musculus"
[GO:0001891 "phagocytic cup" evidence=ISO] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO] [GO:0004872
"receptor activity" evidence=ISA] [GO:0005080 "protein kinase C
binding" evidence=ISO;ISA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0008104 "protein localization"
evidence=ISA] [GO:0008200 "ion channel inhibitor activity"
evidence=IDA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=ISO] [GO:0015935
"small ribosomal subunit" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=ISO] [GO:0030308 "negative regulation of cell
growth" evidence=ISO] [GO:0030335 "positive regulation of cell
migration" evidence=ISO] [GO:0030425 "dendrite" evidence=IDA]
[GO:0030496 "midbody" evidence=ISO] [GO:0030971 "receptor tyrosine
kinase binding" evidence=ISO] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISO] [GO:0035556 "intracellular
signal transduction" evidence=ISA] [GO:0040008 "regulation of
growth" evidence=IEA] [GO:0042169 "SH2 domain binding"
evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=ISO]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0050765 "negative
regulation of phagocytosis" evidence=ISO] [GO:0051726 "regulation
of cell cycle" evidence=ISO] [GO:0051898 "negative regulation of
protein kinase B signaling cascade" evidence=ISO] [GO:0061099
"negative regulation of protein tyrosine kinase activity"
evidence=ISO] [GO:0090003 "regulation of establishment of protein
localization to plasma membrane" evidence=ISO] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:101849 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0008104 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
GO:GO:0035556 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004872
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 EMBL:CH466575
GO:GO:0051302 GO:GO:2000543 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 ChiTaRS:GNB2L1 GO:GO:0015935 EMBL:D29802
EMBL:X75313 EMBL:AK002493 EMBL:AK012242 EMBL:AK017772 EMBL:AK051226
EMBL:AK159797 EMBL:AK160528 EMBL:AK160739 EMBL:AK161234
EMBL:AK166417 EMBL:AK166786 EMBL:AK166800 EMBL:AK166889
EMBL:AK166945 EMBL:AK168086 EMBL:AK168096 EMBL:AK168196
EMBL:AK168349 EMBL:AL645849 EMBL:BC046760 EMBL:AF295529
IPI:IPI00317740 PIR:S38398 RefSeq:NP_032169.1 UniGene:Mm.5305
ProteinModelPortal:P68040 SMR:P68040 IntAct:P68040 STRING:P68040
REPRODUCTION-2DPAGE:P68040 SWISS-2DPAGE:P68040 PaxDb:P68040
PRIDE:P68040 Ensembl:ENSMUST00000020640 GeneID:14694 KEGG:mmu:14694
UCSC:uc007ipa.1 InParanoid:Q9CSQ0 NextBio:286639 Bgee:P68040
Genevestigator:P68040 GermOnline:ENSMUSG00000020372 Uniprot:P68040
Length = 317
Score = 1072 (382.4 bits), Expect = 1.9e-108, P = 1.9e-108
Identities = 199/309 (64%), Positives = 236/309 (76%)
Query: 3 TETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKG 62
TE + LRGTL GHNGWVTQIAT P+FPD ILS SRD T+I+WKLTRD+TNYG+PQ+ L+G
Sbjct: 2 TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRG 61
Query: 63 HSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 122
HSHF+SD+V+SSDG +ALSGSWD TLRLWDL G TTRRF HTKDVLSVAFS DNRQIV
Sbjct: 62 HSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIV 121
Query: 123 SSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTN 182
S SRDKTIKLWNTL CK+T+ ++ HS+WVSCVRFSPN NPIIVS GWD++VKVWNL N
Sbjct: 122 SGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN 181
Query: 183 CKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCF 242
CKLK NH GHTGYLNTVTVSPDGSLCASGGKD AMLWDLN+GKHL+TL DII ALCF
Sbjct: 182 CKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCF 241
Query: 243 SPNRSFQKIKLDISRTLQ--KSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSS 300
SPNR + S + + +I+ + + T + S+A+S D + + +
Sbjct: 242 SPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAG 301
Query: 301 SRDKTIKLW 309
D +++W
Sbjct: 302 YTDNLVRVW 310
Score = 218 (81.8 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 48/115 (41%), Positives = 73/115 (63%)
Query: 265 ILYPINHGKMETPFFSLFR-DVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLE 323
+L+ +N GK ++L D+++ NR + ++ +IK+W DLE
Sbjct: 217 MLWDLNEGKH---LYTLDGGDIINALCFSPNRYWLCAATGPSIKIW-----------DLE 262
Query: 324 TKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVSVTSR 378
K +V+EL+ +V+S S+KA+PP C SLAWS DGQTLFAGY+DN +RVWQV++ +R
Sbjct: 263 GKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGTR 317
Score = 191 (72.3 bits), Expect = 8.9e-13, P = 8.9e-13
Identities = 56/169 (33%), Positives = 81/169 (47%)
Query: 191 GHTGYLNTVTVSPD-GSLCASGGKDMNAMLWDL-----NDGKHLHTLV-HNDIITALCFS 243
GH G++ + +P + S +D ++W L N G L H+ ++ + S
Sbjct: 13 GHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVIS 72
Query: 244 PNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRD 303
+ F +S + L L+ + G F +DVLSVAFS DNRQIVS SRD
Sbjct: 73 SDGQFA-----LSGSWD-GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 304 KTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADPPMCLSLAW 352
KTIKLWNTL CK+T+ D + V +R S + P+ +S W
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVR-----FSPNSSNPIIVSCGW 170
Score = 156 (60.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 49/177 (27%), Positives = 82/177 (46%)
Query: 147 GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS-----GHTGYLNTVTV 201
GH+ WV+ + +P + +I+SA D+ + +W LT + GH+ +++ V +
Sbjct: 13 GHNGWVTQIATTPQFPD-MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVI 71
Query: 202 SPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HN-DIITALCFSPNRSFQKIKLDISRTL 259
S DG SG D LWDL G V H D+++ S NR D +T+
Sbjct: 72 SSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD--KTI 129
Query: 260 QKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCK 316
+ N + + ++ S + + + + N IVS DK +K+WN LA+CK
Sbjct: 130 KLWNTL--GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWN-LANCK 183
Score = 133 (51.9 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 38/174 (21%), Positives = 77/174 (44%)
Query: 15 HNGWVTQIATNPKFPDTIL-SCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLS 73
H+ WV+ + +P + I+ SC D + +W L N + + GH+ +++ + +S
Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA----NCKLKTNHI-GHTGYLNTVTVS 201
Query: 74 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLW 133
DG+ SG D LWDL GK + D+++ NR + ++ +IK+W
Sbjct: 202 PDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINALCFSPNRYWLCAATGPSIKIW 259
Query: 134 NT-----LAHCKFTIVE-DGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT 181
+ + K ++ ++ C + + + + D +V+VW +T
Sbjct: 260 DLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVT 313
>RGD|69229 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G protein),
beta polypeptide 2 like 1" species:10116 "Rattus norvegicus"
[GO:0001891 "phagocytic cup" evidence=ISO;ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO;ISS] [GO:0005080
"protein kinase C binding" evidence=IC;ISO;IDA] [GO:0005634
"nucleus" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISO] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007205 "protein kinase C-activating
G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0007369 "gastrulation" evidence=IEA] [GO:0008200 "ion channel
inhibitor activity" evidence=IEA;ISO] [GO:0008656 "cysteine-type
endopeptidase activator activity involved in apoptotic process"
evidence=IEA;ISO] [GO:0015935 "small ribosomal subunit"
evidence=IDA] [GO:0017148 "negative regulation of translation"
evidence=IMP] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=ISO;ISS] [GO:0030308 "negative
regulation of cell growth" evidence=ISO;ISS] [GO:0030335 "positive
regulation of cell migration" evidence=ISO;ISS] [GO:0030425
"dendrite" evidence=IEA;ISO] [GO:0030496 "midbody" evidence=ISO;ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISO;ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=ISO;ISS]
[GO:0032880 "regulation of protein localization" evidence=ISS]
[GO:0042169 "SH2 domain binding" evidence=ISO;ISS] [GO:0043025
"neuronal cell body" evidence=ISO;ISS] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO;ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=ISO;ISS] [GO:0048471 "perinuclear region
of cytoplasm" evidence=ISO;ISS] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=ISO;ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISO;ISS] [GO:0051898 "negative regulation of protein kinase
B signaling cascade" evidence=IEA;ISO] [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISO]
[GO:0090003 "regulation of establishment of protein localization to
plasma membrane" evidence=IMP] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:69229 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148
GO:GO:0043547 GO:GO:0007205 GO:GO:0043025 GO:GO:0030425
GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0090003 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 OrthoDB:EOG4933J5
GO:GO:0015935 EMBL:U03390 EMBL:BC063809 IPI:IPI00231134 PIR:A36986
RefSeq:NP_570090.2 RefSeq:XP_003751228.1 UniGene:Rn.55487
ProteinModelPortal:P63245 SMR:P63245 IntAct:P63245 MINT:MINT-4095812
STRING:P63245 PhosphoSite:P63245 PRIDE:P63245
Ensembl:ENSRNOT00000003334 GeneID:100911540 GeneID:83427
KEGG:rno:100911540 KEGG:rno:83427 UCSC:RGD:69229 InParanoid:P63245
NextBio:615845 Genevestigator:P63245 GermOnline:ENSRNOG00000002390
Uniprot:P63245
Length = 317
Score = 1072 (382.4 bits), Expect = 1.9e-108, P = 1.9e-108
Identities = 199/309 (64%), Positives = 236/309 (76%)
Query: 3 TETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKG 62
TE + LRGTL GHNGWVTQIAT P+FPD ILS SRD T+I+WKLTRD+TNYG+PQ+ L+G
Sbjct: 2 TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRG 61
Query: 63 HSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 122
HSHF+SD+V+SSDG +ALSGSWD TLRLWDL G TTRRF HTKDVLSVAFS DNRQIV
Sbjct: 62 HSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIV 121
Query: 123 SSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTN 182
S SRDKTIKLWNTL CK+T+ ++ HS+WVSCVRFSPN NPIIVS GWD++VKVWNL N
Sbjct: 122 SGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN 181
Query: 183 CKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCF 242
CKLK NH GHTGYLNTVTVSPDGSLCASGGKD AMLWDLN+GKHL+TL DII ALCF
Sbjct: 182 CKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCF 241
Query: 243 SPNRSFQKIKLDISRTLQ--KSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSS 300
SPNR + S + + +I+ + + T + S+A+S D + + +
Sbjct: 242 SPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAG 301
Query: 301 SRDKTIKLW 309
D +++W
Sbjct: 302 YTDNLVRVW 310
Score = 218 (81.8 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 48/115 (41%), Positives = 73/115 (63%)
Query: 265 ILYPINHGKMETPFFSLFR-DVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLE 323
+L+ +N GK ++L D+++ NR + ++ +IK+W DLE
Sbjct: 217 MLWDLNEGKH---LYTLDGGDIINALCFSPNRYWLCAATGPSIKIW-----------DLE 262
Query: 324 TKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVSVTSR 378
K +V+EL+ +V+S S+KA+PP C SLAWS DGQTLFAGY+DN +RVWQV++ +R
Sbjct: 263 GKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGTR 317
Score = 191 (72.3 bits), Expect = 8.9e-13, P = 8.9e-13
Identities = 56/169 (33%), Positives = 81/169 (47%)
Query: 191 GHTGYLNTVTVSPD-GSLCASGGKDMNAMLWDL-----NDGKHLHTLV-HNDIITALCFS 243
GH G++ + +P + S +D ++W L N G L H+ ++ + S
Sbjct: 13 GHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVIS 72
Query: 244 PNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRD 303
+ F +S + L L+ + G F +DVLSVAFS DNRQIVS SRD
Sbjct: 73 SDGQFA-----LSGSWD-GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 304 KTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADPPMCLSLAW 352
KTIKLWNTL CK+T+ D + V +R S + P+ +S W
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVR-----FSPNSSNPIIVSCGW 170
Score = 156 (60.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 49/177 (27%), Positives = 82/177 (46%)
Query: 147 GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS-----GHTGYLNTVTV 201
GH+ WV+ + +P + +I+SA D+ + +W LT + GH+ +++ V +
Sbjct: 13 GHNGWVTQIATTPQFPD-MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVI 71
Query: 202 SPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HN-DIITALCFSPNRSFQKIKLDISRTL 259
S DG SG D LWDL G V H D+++ S NR D +T+
Sbjct: 72 SSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD--KTI 129
Query: 260 QKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCK 316
+ N + + ++ S + + + + N IVS DK +K+WN LA+CK
Sbjct: 130 KLWNTL--GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWN-LANCK 183
Score = 133 (51.9 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 38/174 (21%), Positives = 77/174 (44%)
Query: 15 HNGWVTQIATNPKFPDTIL-SCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLS 73
H+ WV+ + +P + I+ SC D + +W L N + + GH+ +++ + +S
Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA----NCKLKTNHI-GHTGYLNTVTVS 201
Query: 74 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLW 133
DG+ SG D LWDL GK + D+++ NR + ++ +IK+W
Sbjct: 202 PDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINALCFSPNRYWLCAATGPSIKIW 259
Query: 134 NT-----LAHCKFTIVE-DGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT 181
+ + K ++ ++ C + + + + D +V+VW +T
Sbjct: 260 DLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVT 313
>UNIPROTKB|O42249 [details] [associations]
symbol:gnb2l1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:8128 "Oreochromis niloticus" [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0030178 GO:GO:2000114
GO:GO:0051302 GO:GO:2000543 HOVERGEN:HBG000277 EMBL:AF025331
UniGene:Oni.25 ProteinModelPortal:O42249 SMR:O42249 PRIDE:O42249
Uniprot:O42249
Length = 317
Score = 1071 (382.1 bits), Expect = 2.4e-108, P = 2.4e-108
Identities = 203/315 (64%), Positives = 240/315 (76%)
Query: 3 TETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKG 62
TE + +RGTL GH+GWVTQIAT PK+PD ILS SRD ++I+WKLTRD+TNYG+PQ+ LKG
Sbjct: 2 TEQMTVRGTLKGHSGWVTQIATTPKYPDMILSASRDKSIIMWKLTRDETNYGIPQRSLKG 61
Query: 63 HSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 122
HSHF+SD+V+SSDG +ALSG+WD TLRLWDL G TTRRF HTKDVLSVAFS DNRQIV
Sbjct: 62 HSHFVSDVVISSDGQFALSGAWDGTLRLWDLTTGLTTRRFVGHTKDVLSVAFSADNRQIV 121
Query: 123 SSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTN 182
S SRDKTIKLWNTL CK+TI ++GH++WVSCVRFSPN NPIIVS GWD+MVKVWNL N
Sbjct: 122 SGSRDKTIKLWNTLGVCKYTIQDEGHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLAN 181
Query: 183 CKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCF 242
CKLK NH GHTGYLNTVTVSPDGSLCASGGKD AMLWDLN+GKHL+TL D+I ALCF
Sbjct: 182 CKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDSGDVINALCF 241
Query: 243 SPNRSF------QKIKL-DISRTLQKSNLILYPIN-HGKMETPFFSLFRDVLSVAFSVDN 294
SPNR + IK+ D+ + L I+ + K E P S+A+S D
Sbjct: 242 SPNRYWLCAATGPSIKIWDLEGKIIVDELRQEVISTNSKAEPP------QCTSLAWSADG 295
Query: 295 RQIVSSSRDKTIKLW 309
+ + + D I++W
Sbjct: 296 QTLFAGYTDNLIRVW 310
Score = 221 (82.9 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 50/114 (43%), Positives = 71/114 (62%)
Query: 265 ILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLET 324
+L+ +N GK S DV++ NR + ++ +IK+W DLE
Sbjct: 217 MLWDLNEGKHLYTLDS--GDVINALCFSPNRYWLCAATGPSIKIW-----------DLEG 263
Query: 325 KKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVSVTSR 378
K +V+ELR +V+S ++KA+PP C SLAWS DGQTLFAGY+DN IRVWQV++ +R
Sbjct: 264 KIIVDELRQEVISTNSKAEPPQCTSLAWSADGQTLFAGYTDNLIRVWQVTIGTR 317
Score = 192 (72.6 bits), Expect = 6.6e-13, P = 6.6e-13
Identities = 57/169 (33%), Positives = 83/169 (49%)
Query: 191 GHTGYLNTVTVSPD-GSLCASGGKDMNAMLWDL-----NDGKHLHTLV-HNDIITALCFS 243
GH+G++ + +P + S +D + ++W L N G +L H+ ++ + S
Sbjct: 13 GHSGWVTQIATTPKYPDMILSASRDKSIIMWKLTRDETNYGIPQRSLKGHSHFVSDVVIS 72
Query: 244 PNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRD 303
+ F +S L L+ + G F +DVLSVAFS DNRQIVS SRD
Sbjct: 73 SDGQFA-----LSGAWD-GTLRLWDLTTGLTTRRFVGHTKDVLSVAFSADNRQIVSGSRD 126
Query: 304 KTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADPPMCLSLAW 352
KTIKLWNTL CK+TI D + V +R S + P+ +S W
Sbjct: 127 KTIKLWNTLGVCKYTIQDEGHTEWVSCVR-----FSPNSSNPIIVSCGW 170
Score = 163 (62.4 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 52/179 (29%), Positives = 85/179 (47%)
Query: 147 GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKI-----NHSGHTGYLNTVTV 201
GHS WV+ + +P + + +I+SA D+ + +W LT + + GH+ +++ V +
Sbjct: 13 GHSGWVTQIATTPKYPD-MILSASRDKSIIMWKLTRDETNYGIPQRSLKGHSHFVSDVVI 71
Query: 202 SPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQ 260
S DG SG D LWDL G V H + ++ FS + Q + +T++
Sbjct: 72 SSDGQFALSGAWDGTLRLWDLTTGLTTRRFVGHTKDVLSVAFSADNR-QIVSGSRDKTIK 130
Query: 261 KSNLI---LYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCK 316
N + Y I + T + S R + + N IVS DK +K+WN LA+CK
Sbjct: 131 LWNTLGVCKYTIQD-EGHTEWVSCVR----FSPNSSNPIIVSCGWDKMVKVWN-LANCK 183
Score = 138 (53.6 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 38/175 (21%), Positives = 79/175 (45%)
Query: 14 GHNGWVTQIATNPKFPDTIL-SCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVL 72
GH WV+ + +P + I+ SC D + +W L N + + GH+ +++ + +
Sbjct: 146 GHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLA----NCKLKTNHI-GHTGYLNTVTV 200
Query: 73 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKL 132
S DG+ SG D LWDL GK + + DV++ NR + ++ +IK+
Sbjct: 201 SPDGSLCASGGKDGQAMLWDLNEGKHLYTLD--SGDVINALCFSPNRYWLCAATGPSIKI 258
Query: 133 WNT-----LAHCKFTIVE-DGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT 181
W+ + + ++ + ++ C + + + + D +++VW +T
Sbjct: 259 WDLEGKIIVDELRQEVISTNSKAEPPQCTSLAWSADGQTLFAGYTDNLIRVWQVT 313
>ZFIN|ZDB-GENE-990415-89 [details] [associations]
symbol:gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2-like 1" species:7955 "Danio rerio"
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0060027 "convergent extension involved in
gastrulation" evidence=IGI;IMP] [GO:0051302 "regulation of cell
division" evidence=IMP] [GO:2000114 "regulation of establishment of
cell polarity" evidence=IMP] [GO:0032880 "regulation of protein
localization" evidence=IMP] [GO:0030178 "negative regulation of Wnt
receptor signaling pathway" evidence=IMP] [GO:2000543 "positive
regulation of gastrulation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-990415-89 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0001525 GO:GO:0030178 GO:GO:0060027
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 HOGENOM:HOG000091643
KO:K14753 CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 EMBL:AF025330 EMBL:AY423038 EMBL:BC049459
IPI:IPI00507097 RefSeq:NP_571519.1 UniGene:Dr.75572
ProteinModelPortal:O42248 SMR:O42248 STRING:O42248 PRIDE:O42248
Ensembl:ENSDART00000061001 GeneID:30722 KEGG:dre:30722
InParanoid:O42248 NextBio:20807071 ArrayExpress:O42248 Bgee:O42248
Uniprot:O42248
Length = 317
Score = 1065 (380.0 bits), Expect = 1.0e-107, P = 1.0e-107
Identities = 199/309 (64%), Positives = 235/309 (76%)
Query: 3 TETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKG 62
TE + +RGTL GH+GWVTQIAT P+FPD ILS SRD T+I+WKLTRD+TNYG+PQ+ L+G
Sbjct: 2 TEQMTVRGTLKGHSGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRG 61
Query: 63 HSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 122
HSHF+SD+V+SSDG +ALSGSWD TLRLWDL G TTRRF HTKDVLSVAFS DNRQIV
Sbjct: 62 HSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADNRQIV 121
Query: 123 SSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTN 182
S SRDKTIKLWNTL CK+TI +D H++WVSCVRFSPN NPIIVS GWD+MVKVWNL N
Sbjct: 122 SGSRDKTIKLWNTLGVCKYTIQDDSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLAN 181
Query: 183 CKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCF 242
CKLK NH GHTGYLNTVTVSPDGSLCASGGKD AMLWDLN+GKHL+TL D I ALCF
Sbjct: 182 CKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDTINALCF 241
Query: 243 SPNRSFQKIKLDISRTLQ--KSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSS 300
SPNR + S + + +I+ + + T + S+A+S D + + +
Sbjct: 242 SPNRYWLCAATGPSIKIWDLEGKIIVDELRQDIITTNSKAEPPQCTSLAWSADGQTLFAG 301
Query: 301 SRDKTIKLW 309
D I++W
Sbjct: 302 YTDNLIRVW 310
Score = 216 (81.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 48/115 (41%), Positives = 72/115 (62%)
Query: 265 ILYPINHGKMETPFFSLFR-DVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLE 323
+L+ +N GK ++L D ++ NR + ++ +IK+W DLE
Sbjct: 217 MLWDLNEGKH---LYTLDGGDTINALCFSPNRYWLCAATGPSIKIW-----------DLE 262
Query: 324 TKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVSVTSR 378
K +V+ELR D+++ ++KA+PP C SLAWS DGQTLFAGY+DN IRVWQV++ +R
Sbjct: 263 GKIIVDELRQDIITTNSKAEPPQCTSLAWSADGQTLFAGYTDNLIRVWQVTIGTR 317
Score = 193 (73.0 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 57/169 (33%), Positives = 82/169 (48%)
Query: 191 GHTGYLNTVTVSPD-GSLCASGGKDMNAMLWDL-----NDGKHLHTLV-HNDIITALCFS 243
GH+G++ + +P + S +D ++W L N G L H+ ++ + S
Sbjct: 13 GHSGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVIS 72
Query: 244 PNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRD 303
+ F +S + L L+ + G F +DVLSVAFS DNRQIVS SRD
Sbjct: 73 SDGQFA-----LSGSWD-GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADNRQIVSGSRD 126
Query: 304 KTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADPPMCLSLAW 352
KTIKLWNTL CK+TI D + V +R S + P+ +S W
Sbjct: 127 KTIKLWNTLGVCKYTIQDDSHTEWVSCVR-----FSPNSSNPIIVSCGW 170
Score = 160 (61.4 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 52/179 (29%), Positives = 82/179 (45%)
Query: 147 GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS-----GHTGYLNTVTV 201
GHS WV+ + +P + +I+SA D+ + +W LT + GH+ +++ V +
Sbjct: 13 GHSGWVTQIATTPQFPD-MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVI 71
Query: 202 SPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQ 260
S DG SG D LWDL G V H + ++ FS + Q + +T++
Sbjct: 72 SSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADNR-QIVSGSRDKTIK 130
Query: 261 KSNLI---LYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCK 316
N + Y I T + S R + + N IVS DK +K+WN LA+CK
Sbjct: 131 LWNTLGVCKYTIQDDS-HTEWVSCVR----FSPNSSNPIIVSCGWDKMVKVWN-LANCK 183
Score = 131 (51.2 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 39/176 (22%), Positives = 77/176 (43%)
Query: 13 NGHNGWVTQIATNPKFPDTIL-SCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV 71
+ H WV+ + +P + I+ SC D + +W L N + + GH+ +++ +
Sbjct: 145 DSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLA----NCKLKTNHI-GHTGYLNTVT 199
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
+S DG+ SG D LWDL GK D + ++ FS NR + ++ +IK
Sbjct: 200 VSPDGSLCASGGKDGQAMLWDLNEGKHLYTL-DGGDTINALCFS-PNRYWLCAATGPSIK 257
Query: 132 LWNTLAHC------KFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT 181
+W+ + I + ++ C + + + + D +++VW +T
Sbjct: 258 IWDLEGKIIVDELRQDIITTNSKAEPPQCTSLAWSADGQTLFAGYTDNLIRVWQVT 313
>UNIPROTKB|I3LI24 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway" evidence=IEA]
[GO:0051898 "negative regulation of protein kinase B signaling
cascade" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0043547 "positive regulation of GTPase activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0042169 "SH2 domain binding" evidence=IEA]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=IEA] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0030971 "receptor tyrosine kinase binding" evidence=IEA]
[GO:0030496 "midbody" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030335 "positive regulation of cell migration"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=IEA] [GO:0008200
"ion channel inhibitor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0001891 "phagocytic cup"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025 GO:GO:0030425
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:2001244
GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 Ensembl:ENSSSCT00000022602
Uniprot:I3LI24
Length = 317
Score = 1026 (366.2 bits), Expect = 1.4e-103, P = 1.4e-103
Identities = 190/309 (61%), Positives = 230/309 (74%)
Query: 3 TETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKG 62
TE + LRGTL GHNGWVTQ++ + + LSC RD T+I+WKLTRD+TNYG+PQ+ L+G
Sbjct: 2 TEQMTLRGTLKGHNGWVTQLSAHAETQRLFLSCRRDKTIIMWKLTRDETNYGIPQRALRG 61
Query: 63 HSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 122
HSHF+SD+V+SSDG +ALSGSWD TLRLWDL G TTRRF HTKDVLSVAFS DNRQIV
Sbjct: 62 HSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIV 121
Query: 123 SSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTN 182
S SRDKTIKLWNTL CK+T+ ++ HS+WVSCVRFSPN NPIIVS GWD++V VWNL N
Sbjct: 122 SGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVNVWNLAN 181
Query: 183 CKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCF 242
CKLK NH GHTGYLNTVTVSPDGSLCASGGKD AMLWDLN+GKHL+TL DII ALCF
Sbjct: 182 CKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCF 241
Query: 243 SPNRSFQKIKLDISRTLQ--KSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSS 300
SPNR + S + + +I+ + + T + S+A+S D + + +
Sbjct: 242 SPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAG 301
Query: 301 SRDKTIKLW 309
D +++W
Sbjct: 302 YTDNLVRVW 310
Score = 218 (81.8 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 48/115 (41%), Positives = 73/115 (63%)
Query: 265 ILYPINHGKMETPFFSLFR-DVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLE 323
+L+ +N GK ++L D+++ NR + ++ +IK+W DLE
Sbjct: 217 MLWDLNEGKH---LYTLDGGDIINALCFSPNRYWLCAATGPSIKIW-----------DLE 262
Query: 324 TKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVSVTSR 378
K +V+EL+ +V+S S+KA+PP C SLAWS DGQTLFAGY+DN +RVWQV++ +R
Sbjct: 263 GKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGTR 317
Score = 178 (67.7 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 56/169 (33%), Positives = 81/169 (47%)
Query: 191 GHTGYLNTVTVSPDGS-LCASGGKDMNAMLWDL-----NDGKHLHTLV-HNDIITALCFS 243
GH G++ ++ + L S +D ++W L N G L H+ ++ + S
Sbjct: 13 GHNGWVTQLSAHAETQRLFLSCRRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVIS 72
Query: 244 PNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRD 303
+ F +S + L L+ + G F +DVLSVAFS DNRQIVS SRD
Sbjct: 73 SDGQFA-----LSGSWD-GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 304 KTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADPPMCLSLAW 352
KTIKLWNTL CK+T+ D + V +R S + P+ +S W
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVR-----FSPNSSNPIIVSCGW 170
Score = 134 (52.2 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 46/177 (25%), Positives = 77/177 (43%)
Query: 147 GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS-----GHTGYLNTVTV 201
GH+ WV+ + Q + +S D+ + +W LT + GH+ +++ V +
Sbjct: 13 GHNGWVTQLSAHAETQR-LFLSCRRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVI 71
Query: 202 SPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HN-DIITALCFSPNRSFQKIKLDISRTL 259
S DG SG D LWDL G V H D+++ S NR D +T+
Sbjct: 72 SSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD--KTI 129
Query: 260 QKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCK 316
+ N + + ++ S + + + + N IVS DK + +WN LA+CK
Sbjct: 130 KLWNTL--GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVNVWN-LANCK 183
Score = 133 (51.9 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 38/174 (21%), Positives = 77/174 (44%)
Query: 15 HNGWVTQIATNPKFPDTIL-SCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLS 73
H+ WV+ + +P + I+ SC D + +W L N + + GH+ +++ + +S
Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVNVWNLA----NCKLKTNHI-GHTGYLNTVTVS 201
Query: 74 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLW 133
DG+ SG D LWDL GK + D+++ NR + ++ +IK+W
Sbjct: 202 PDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINALCFSPNRYWLCAATGPSIKIW 259
Query: 134 NT-----LAHCKFTIVE-DGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT 181
+ + K ++ ++ C + + + + D +V+VW +T
Sbjct: 260 DLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVT 313
>UNIPROTKB|G4MQX3 [details] [associations]
symbol:MGG_04719 "Guanine nucleotide-binding protein
subunit beta-like protein" species:242507 "Magnaporthe oryzae
70-15" [GO:0005575 "cellular_component" evidence=ND] [GO:0043581
"mycelium development" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 GO:GO:0043581 KO:K14753
RefSeq:XP_003710816.1 ProteinModelPortal:G4MQX3 SMR:G4MQX3
EnsemblFungi:MGG_04719T0 GeneID:2677887 KEGG:mgr:MGG_04719
Uniprot:G4MQX3
Length = 316
Score = 968 (345.8 bits), Expect = 2.0e-97, P = 2.0e-97
Identities = 185/319 (57%), Positives = 236/319 (73%)
Query: 4 ETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGH 63
E L L+GTL GHNGWVT +AT+ + P+ +LS SRD TLIIW LTRD+T+YG P++ LKGH
Sbjct: 3 EQLILKGTLEGHNGWVTSLATSMENPNMLLSSSRDKTLIIWNLTRDETSYGYPKRSLKGH 62
Query: 64 SHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 123
SH +SD V+SSDG YALS SWDKTLRLW+LA G TTRRF HT DVLSV+FS DNRQIVS
Sbjct: 63 SHIVSDCVISSDGAYALSASWDKTLRLWELATGTTTRRFVGHTNDVLSVSFSADNRQIVS 122
Query: 124 SSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNC 183
SRD++IKLWNTL CK+TI E GHS+WVSCVRFSPN QNP+IVS+GWD++VKVW L++C
Sbjct: 123 GSRDRSIKLWNTLGDCKYTITEKGHSEWVSCVRFSPNPQNPVIVSSGWDKLVKVWELSSC 182
Query: 184 KLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCFS 243
KL+ +H GHTGY+NTVT+SPDGSLCASGGKD MLWDLN+ KHL++L ND I AL FS
Sbjct: 183 KLQTDHIGHTGYINTVTISPDGSLCASGGKDGTTMLWDLNESKHLYSLNANDEIHALVFS 242
Query: 244 PNRSFQKIKLDISRTLQKSNLILYPINH-GKMET--PFFSLFR------DVLSVAFSVDN 294
PNR + + T S++I++ + K++ P F+ + +S+A+S D
Sbjct: 243 PNRYWL-----CAATA--SSIIIFDLEKKSKVDELKPEFAAVGKKSREPECISLAWSADG 295
Query: 295 RQIVSSSRDKTIKLWNTLA 313
+ + + D I+ W ++
Sbjct: 296 QTLFAGYTDNIIRAWGVMS 314
Score = 185 (70.2 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 56/175 (32%), Positives = 88/175 (50%)
Query: 185 LKINHSGHTGYLNTVTVSPDG-SLCASGGKDMNAMLWDLN-D----GKHLHTLV-HNDII 237
LK GH G++ ++ S + ++ S +D ++W+L D G +L H+ I+
Sbjct: 7 LKGTLEGHNGWVTSLATSMENPNMLLSSSRDKTLIIWNLTRDETSYGYPKRSLKGHSHIV 66
Query: 238 TALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQI 297
+ S + ++ +S + K+ L L+ + G F DVLSV+FS DNRQI
Sbjct: 67 SDCVISSDGAYA-----LSASWDKT-LRLWELATGTTTRRFVGHTNDVLSVSFSADNRQI 120
Query: 298 VSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADPPMCLSLAW 352
VS SRD++IKLWNTL CK+TI + + V +R S P+ +S W
Sbjct: 121 VSGSRDRSIKLWNTLGDCKYTITEKGHSEWVSCVR-----FSPNPQNPVIVSSGW 170
Score = 174 (66.3 bits), Expect = 9.3e-11, P = 9.3e-11
Identities = 34/68 (50%), Positives = 43/68 (63%)
Query: 307 KLWNTLAHCKFTIV-DLETKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSD 365
+ W A I+ DLE K V+EL+P+ + K+ P C+SLAWS DGQTLFAGY+D
Sbjct: 245 RYWLCAATASSIIIFDLEKKSKVDELKPEFAAVGKKSREPECISLAWSADGQTLFAGYTD 304
Query: 366 NTIRVWQV 373
N IR W V
Sbjct: 305 NIIRAWGV 312
Score = 38 (18.4 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 7/22 (31%), Positives = 11/22 (50%)
Query: 353 STDGQTLFAGYSDNTIRVWQVS 374
S DG +G D T +W ++
Sbjct: 201 SPDGSLCASGGKDGTTMLWDLN 222
>ASPGD|ASPL0000014385 [details] [associations]
symbol:cpcB species:162425 "Emericella nidulans"
[GO:0034198 "cellular response to amino acid starvation"
evidence=IMP] [GO:0001965 "G-protein alpha-subunit binding"
evidence=IGI;ISS] [GO:0070798 "positive regulation of
cleistothecium development" evidence=IMP] [GO:0005622
"intracellular" evidence=IDA] [GO:0035690 "cellular response to
drug" evidence=IEP] [GO:0097308 "cellular response to farnesol"
evidence=IEP] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0005080 "protein kinase C binding" evidence=IEA] [GO:0070791
"cleistothecium development" evidence=IMP] [GO:0032995 "regulation
of fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001302
EMBL:AACD01000067 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
RefSeq:XP_661767.1 ProteinModelPortal:G5EB28 SMR:G5EB28
EnsemblFungi:CADANIAT00004509 GeneID:2873584 KEGG:ani:AN4163.2
Uniprot:G5EB28
Length = 316
Score = 945 (337.7 bits), Expect = 5.3e-95, P = 5.3e-95
Identities = 183/317 (57%), Positives = 231/317 (72%)
Query: 4 ETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGH 63
E L LRGTL GHNGWVT +AT+ + P+ +LS SRD TLIIW LTRD+ YG P++ L+GH
Sbjct: 3 EQLVLRGTLEGHNGWVTSLATSLENPNMLLSGSRDKTLIIWNLTRDEQAYGYPKRSLEGH 62
Query: 64 SHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 123
SH +SD V+SSDG YALS SWDK+LRLW+L++G+TTR F HT DVLSV+FS DNRQIVS
Sbjct: 63 SHIVSDCVISSDGAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSADNRQIVS 122
Query: 124 SSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNC 183
SRD+TIKLWNTL CK+TI + GH++WVSCVRFSPN QNP+IVSAGWD++VKVW L +C
Sbjct: 123 GSRDRTIKLWNTLGDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWELASC 182
Query: 184 KLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCFS 243
+L+ +H GHTGY+NTVT+SPDGSLCASGGKD MLWDLN+ KHL++L D I AL FS
Sbjct: 183 RLQTDHIGHTGYINTVTISPDGSLCASGGKDGVTMLWDLNESKHLYSLHAGDEIHALVFS 242
Query: 244 PNRSFQKIKLDISRT---LQKSNLI--LYP--INHGKMETPFFSLFRDVLSVAFSVDNRQ 296
PNR + S T L+K + + L P I GK S + +S+A+S D +
Sbjct: 243 PNRYWLCAATSSSITIFDLEKKSKVDELKPEYIEKGKK-----SREPECVSLAWSADGQT 297
Query: 297 IVSSSRDKTIKLWNTLA 313
+ + D I+ W ++
Sbjct: 298 LFAGYTDNKIRAWGVMS 314
Score = 206 (77.6 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 56/169 (33%), Positives = 89/169 (52%)
Query: 191 GHTGYLNTVTVSPDG-SLCASGGKDMNAMLWDLNDGKHLH-----TLV-HNDIITALCFS 243
GH G++ ++ S + ++ SG +D ++W+L + + +L H+ I++ S
Sbjct: 13 GHNGWVTSLATSLENPNMLLSGSRDKTLIIWNLTRDEQAYGYPKRSLEGHSHIVSDCVIS 72
Query: 244 PNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRD 303
+ ++ +S + KS L L+ ++ G+ F DVLSV+FS DNRQIVS SRD
Sbjct: 73 SDGAYA-----LSASWDKS-LRLWELSSGQTTRTFVGHTNDVLSVSFSADNRQIVSGSRD 126
Query: 304 KTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADPPMCLSLAW 352
+TIKLWNTL CK+TI D + V +R S P+ +S W
Sbjct: 127 RTIKLWNTLGDCKYTITDKGHTEWVSCVR-----FSPNPQNPVIVSAGW 170
Score = 182 (69.1 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 33/56 (58%), Positives = 41/56 (73%)
Query: 318 TIVDLETKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQV 373
TI DLE K V+EL+P+ + + K+ P C+SLAWS DGQTLFAGY+DN IR W V
Sbjct: 257 TIFDLEKKSKVDELKPEYIEKGKKSREPECVSLAWSADGQTLFAGYTDNKIRAWGV 312
>UNIPROTKB|P49027 [details] [associations]
symbol:RACK1A "Guanine nucleotide-binding protein subunit
beta-like protein A" species:39947 "Oryza sativa Japonica Group"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0050832 "defense response to fungus" evidence=IMP] [GO:0060267
"positive regulation of respiratory burst" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005737 GO:GO:0009507 GO:GO:0046686
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0050832 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048364 GO:GO:0004871 GO:GO:0048367
GO:GO:0022626 EMBL:AP008207 EMBL:CM000138 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM ProtClustDB:CLSN2682135 EMBL:D38231
EMBL:AP003452 EMBL:AK060428 EMBL:AK098893 EMBL:AK121587 PIR:T03764
RefSeq:NP_001043910.1 UniGene:Os.4684 ProteinModelPortal:P49027
SMR:P49027 STRING:P49027 PRIDE:P49027
EnsemblPlants:LOC_Os01g49290.1 GeneID:4324115
KEGG:dosa:Os01t0686800-02 KEGG:osa:4324115 Gramene:P49027
GO:GO:0060267 Uniprot:P49027
Length = 334
Score = 806 (288.8 bits), Expect = 1.4e-93, Sum P(2) = 1.4e-93
Identities = 161/257 (62%), Positives = 184/257 (71%)
Query: 4 ETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTN---------YG 54
E+L L G ++GHN VT IAT I+S SRD +L++W LT N YG
Sbjct: 6 ESLVLAGVMHGHNDVVTAIATPIDNSPFIVSSSRDKSLLVWDLTNPVQNVGEGAGASEYG 65
Query: 55 VPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 114
VP +RL GHSHF+ D+VLSSDG +ALSGSWD LRLWDL+ G TTRRF H KDVLSVAF
Sbjct: 66 VPFRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLSTGVTTRRFVGHDKDVLSVAF 125
Query: 115 SVDNRQIVSSSRDKTIKLWNTLAHCKFTIVED-----GHSDWVSCVRFSPNHQNPIIVSA 169
SVDNRQIVS+SRD+TIKLWNTL CK+TI D GH+ WVSCVRFSPN P IVS
Sbjct: 126 SVDNRQIVSASRDRTIKLWNTLGECKYTIGGDLGGGEGHNGWVSCVRFSPNTFQPTIVSG 185
Query: 170 GWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLH 229
WDR VKVWNLTNCKL+ N GH GY+N V VSPDGSLCASGGKD +LWDL +GK L+
Sbjct: 186 SWDRTVKVWNLTNCKLRCNLEGHGGYVNAVAVSPDGSLCASGGKDGVTLLWDLAEGKRLY 245
Query: 230 TLVHNDIITALCFSPNR 246
+L II +LCFSPNR
Sbjct: 246 SLDAGSIIHSLCFSPNR 262
Score = 176 (67.0 bits), Expect = 6.6e-11, P = 6.6e-11
Identities = 65/196 (33%), Positives = 91/196 (46%)
Query: 191 GHTGYLNTVTVSPDGS-LCASGGKDMNAMLWDL-----NDGKHLHTLVHNDIITALCFSP 244
GH + + D S S +D + ++WDL N G+ + L
Sbjct: 16 GHNDVVTAIATPIDNSPFIVSSSRDKSLLVWDLTNPVQNVGEGAGASEYGVPFRRLT-GH 74
Query: 245 NRSFQKIKL--DISRTLQKS---NLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVS 299
+ Q + L D L S L L+ ++ G F +DVLSVAFSVDNRQIVS
Sbjct: 75 SHFVQDVVLSSDGQFALSGSWDGELRLWDLSTGVTTRRFVGHDKDVLSVAFSVDNRQIVS 134
Query: 300 SSRDKTIKLWNTLAHCKFTIV-DLETKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQT 358
+SRD+TIKLWNTL CK+TI DL E VS C+ + +T T
Sbjct: 135 ASRDRTIKLWNTLGECKYTIGGDLGGG----EGHNGWVS---------CVRFSPNTFQPT 181
Query: 359 LFAGYSDNTIRVWQVS 374
+ +G D T++VW ++
Sbjct: 182 IVSGSWDRTVKVWNLT 197
Score = 145 (56.1 bits), Expect = 1.4e-93, Sum P(2) = 1.4e-93
Identities = 34/92 (36%), Positives = 52/92 (56%)
Query: 290 FSVDNRQIVSSSRDKTIKLWNTLA-HCKFTIVDLETKKMVEELRPDVVSQSTKADPPMCL 348
+S+D I+ S + W A I DLE+K +V++L+P++ +K C
Sbjct: 245 YSLDAGSIIHSLCFSPNRYWLCAATQDSIKIWDLESKHIVQDLKPEI--PVSKNQMLYCT 302
Query: 349 SLAWSTDGQTLFAGYSDNTIRVWQVSVTSRGG 380
SL WS DG TL+AGY+D TIR++++S S G
Sbjct: 303 SLNWSADGSTLYAGYTDGTIRIYKISGFSYAG 334
Score = 126 (49.4 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 67/252 (26%), Positives = 107/252 (42%)
Query: 105 HTKDVLSVAFSVDNRQ-IVSSSRDKTIKLWNTLAHCKFTIVED--------------GHS 149
H V ++A +DN IVSSSRDK++ +W+ L + + E GHS
Sbjct: 17 HNDVVTAIATPIDNSPFIVSSSRDKSLLVWD-LTNPVQNVGEGAGASEYGVPFRRLTGHS 75
Query: 150 DWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCA 209
+V V S + Q +S WD +++W+L+ GH + +V S D
Sbjct: 76 HFVQDVVLSSDGQ--FALSGSWDGELRLWDLSTGVTTRRFVGHDKDVLSVAFSVDNRQIV 133
Query: 210 SGGKDMNAMLWDLNDGKHLHTLV--------HNDIITALCFSPNRSFQKIKLDIS--RTL 259
S +D LW+ G+ +T+ HN ++ + FSPN +FQ + S RT+
Sbjct: 134 SASRDRTIKLWNTL-GECKYTIGGDLGGGEGHNGWVSCVRFSPN-TFQPTIVSGSWDRTV 191
Query: 260 QKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTI 319
+ NL + K+ V +VA S D S +D LW+ LA K +
Sbjct: 192 KVWNL-----TNCKLRCNLEGHGGYVNAVAVSPDGSLCASGGKDGVTLLWD-LAEGK-RL 244
Query: 320 VDLETKKMVEEL 331
L+ ++ L
Sbjct: 245 YSLDAGSIIHSL 256
>TAIR|locus:2092707 [details] [associations]
symbol:RACK1C_AT "AT3G18130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0048364 "root
development" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0009845 "seed germination" evidence=IGI]
[GO:0071215 "cellular response to abscisic acid stimulus"
evidence=IEP] [GO:0005829 "cytosol" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048364 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0048367 EMBL:AB020749 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AY050338 EMBL:AY101529 IPI:IPI00545680 RefSeq:NP_188441.1
UniGene:At.22741 ProteinModelPortal:Q9LV28 SMR:Q9LV28 IntAct:Q9LV28
STRING:Q9LV28 PaxDb:Q9LV28 PRIDE:Q9LV28 EnsemblPlants:AT3G18130.1
GeneID:821338 KEGG:ath:AT3G18130 GeneFarm:2980 TAIR:At3g18130
InParanoid:Q9LV28 OMA:NCKLRNS PhylomeDB:Q9LV28
Genevestigator:Q9LV28 Uniprot:Q9LV28
Length = 326
Score = 861 (308.1 bits), Expect = 2.7e-88, Sum P(2) = 2.7e-88
Identities = 163/244 (66%), Positives = 190/244 (77%)
Query: 4 ETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGH 63
E L L+G + H VT IAT D I++ SRD ++I+WKLT+DD +YGV Q+RL GH
Sbjct: 3 EGLVLKGIMRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGH 62
Query: 64 SHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 123
SHF+ D+VLSSDG +ALSGSWD LRLWDLA G+TTRRF HTKDVLSVAFS DNRQIVS
Sbjct: 63 SHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVS 122
Query: 124 SSRDKTIKLWNTLAHCKFTIVE-DGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTN 182
+SRD+TIKLWNTL CK+TI E DGH +WVSCVRFSPN P IVSA WD+ VKVWNL N
Sbjct: 123 ASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQN 182
Query: 183 CKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCF 242
CKL+ + GH+GYLNTV VSPDGSLCASGGKD +LWDL +GK L++L II +LCF
Sbjct: 183 CKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSIIHSLCF 242
Query: 243 SPNR 246
SPNR
Sbjct: 243 SPNR 246
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 98/337 (29%), Positives = 166/337 (49%)
Query: 60 LKGHSHFISDIVLSSDGN-YALSGSWDKTLRLW-----DLAAGKTTRRFEDHTKDVLSVA 113
++ H+ ++ I D + ++ S DK++ LW D + G RR H+ V V
Sbjct: 11 MRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVV 70
Query: 114 FSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDR 173
S D + +S S D ++LW+ LA + T GH+ V V FS +++ IVSA DR
Sbjct: 71 LSSDGQFALSGSWDGELRLWD-LATGETTRRFVGHTKDVLSVAFSTDNRQ--IVSASRDR 127
Query: 174 MVKVWN-LTNCKLKINHS-GHTGYLNTVTVSPDGSL--CASGGKDMNAMLWDLNDGKHLH 229
+K+WN L CK I+ GH +++ V SP+ + S D +W+L + K +
Sbjct: 128 TIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRN 187
Query: 230 TLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVL-- 286
+LV H+ + + SP+ S + + ++L+ + GK +SL +
Sbjct: 188 SLVGHSGYLNTVAVSPDGSL------CASGGKDGVILLWDLAEGKK---LYSLEAGSIIH 238
Query: 287 SVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADPPM 346
S+ FS NR + ++ + +I++W DLE+K +VE+L+ D+ S++ K + +
Sbjct: 239 SLCFS-PNRYWLCAATENSIRIW-----------DLESKSVVEDLKVDLKSEAEKNEGGV 286
Query: 347 ----------CLSLAWSTDGQTLFAGYSDNTIRVWQV 373
C SL WS DG TLF+GY+D +RVW +
Sbjct: 287 GTGNQKKVIYCTSLNWSADGSTLFSGYTDGVVRVWGI 323
Score = 40 (19.1 bits), Expect = 2.7e-88, Sum P(2) = 2.7e-88
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 349 SLAWSTDGQTLFAGYSDNTIRVWQVSVTS 377
SL +S + L A ++N+IR+W + S
Sbjct: 239 SLCFSPNRYWLCAA-TENSIRIWDLESKS 266
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 859 (307.4 bits), Expect = 4.4e-88, Sum P(2) = 4.4e-88
Identities = 161/244 (65%), Positives = 191/244 (78%)
Query: 4 ETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGH 63
E L L+GT+ H VT IAT D I++ SRD ++I+WKLT++D +YGV Q+R+ GH
Sbjct: 3 EGLVLKGTMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGH 62
Query: 64 SHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 123
SHF+ D+VLSSDG +ALSGSWD LRLWDLA G++TRRF HTKDVLSVAFS DNRQIVS
Sbjct: 63 SHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVS 122
Query: 124 SSRDKTIKLWNTLAHCKFTIVE-DGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTN 182
+SRD+TIKLWNTL CK+TI E DGH +WVSCVRFSPN P IVSA WD+ VKVWNL N
Sbjct: 123 ASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQN 182
Query: 183 CKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCF 242
CKL+ +GH+GYLNTV VSPDGSLCASGGKD +LWDL +GK L++L II +LCF
Sbjct: 183 CKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSIIHSLCF 242
Query: 243 SPNR 246
SPNR
Sbjct: 243 SPNR 246
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 99/334 (29%), Positives = 163/334 (48%)
Query: 63 HSHFISDIVLSSDGNYAL-SGSWDKTLRLW-----DLAAGKTTRRFEDHTKDVLSVAFSV 116
H+ ++ I D + + + S DK++ LW D + G RR H+ V V S
Sbjct: 14 HTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSS 73
Query: 117 DNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVK 176
D + +S S D ++LW+ LA + T GH+ V V FS +++ IVSA DR +K
Sbjct: 74 DGQFALSGSWDGELRLWD-LATGESTRRFVGHTKDVLSVAFSTDNRQ--IVSASRDRTIK 130
Query: 177 VWN-LTNCKLKINHS-GHTGYLNTVTVSPDGSL--CASGGKDMNAMLWDLNDGKHLHTLV 232
+WN L CK I+ + GH +++ V SP+ + S D +W+L + K +TL
Sbjct: 131 LWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLA 190
Query: 233 -HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVL--SVA 289
H+ + + SP+ S + + ++L+ + GK +SL + S+
Sbjct: 191 GHSGYLNTVAVSPDGSL------CASGGKDGVILLWDLAEGKK---LYSLEAGSIIHSLC 241
Query: 290 FSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADPPM--- 346
FS NR + ++ + +I++W DLE+K +VE+L+ D+ +++ K D
Sbjct: 242 FS-PNRYWLCAATENSIRIW-----------DLESKSVVEDLKVDLKAEAEKTDGSTGIG 289
Query: 347 -------CLSLAWSTDGQTLFAGYSDNTIRVWQV 373
C SL WS DG TLF+GY+D IRVW +
Sbjct: 290 NKTKVIYCTSLNWSADGNTLFSGYTDGVIRVWGI 323
Score = 180 (68.4 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 60/197 (30%), Positives = 92/197 (46%)
Query: 185 LKINHSGHTGYLNTVTVSPDGS-LCASGGKDMNAMLWDLNDGKHLHTLV------HNDII 237
LK HT + + D S + + +D + +LW L + + H+ +
Sbjct: 7 LKGTMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFV 66
Query: 238 TALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQI 297
+ S + F +S + L L+ + G+ F +DVLSVAFS DNRQI
Sbjct: 67 QDVVLSSDGQFA-----LSGSWD-GELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQI 120
Query: 298 VSSSRDKTIKLWNTLAHCKFTIVDLET-KKMVEELRPDVVSQSTKADPPMCLSLAWSTDG 356
VS+SRD+TIKLWNTL CK+TI + + K+ V +R S +T P +S +W
Sbjct: 121 VSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVR---FSPNTLV--PTIVSASW---- 171
Query: 357 QTLFAGYSDNTIRVWQV 373
D T++VW +
Sbjct: 172 --------DKTVKVWNL 180
Score = 40 (19.1 bits), Expect = 4.4e-88, Sum P(2) = 4.4e-88
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 349 SLAWSTDGQTLFAGYSDNTIRVWQVSVTS 377
SL +S + L A ++N+IR+W + S
Sbjct: 239 SLCFSPNRYWLCAA-TENSIRIWDLESKS 266
>TAIR|locus:2194060 [details] [associations]
symbol:ATARCA "AT1G18080" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP;RCA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006417
"regulation of translation" evidence=IGI] [GO:0009845 "seed
germination" evidence=IGI] [GO:0042254 "ribosome biogenesis"
evidence=IGI] [GO:0071215 "cellular response to abscisic acid
stimulus" evidence=IEP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006096
"glycolysis" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] [GO:0009651 "response to salt
stress" evidence=RCA] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0010476 "gibberellin mediated signaling
pathway" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009507 GO:GO:0046686 GO:GO:0006417 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042254 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0022626 EMBL:AC034107
EMBL:AC069551 EMBL:U77381 EMBL:AY035007 EMBL:AY063016 EMBL:AK318781
EMBL:AY088480 IPI:IPI00524816 IPI:IPI00930983 RefSeq:NP_173248.1
UniGene:At.22612 UniGene:At.67882 PDB:3DM0 PDBsum:3DM0
ProteinModelPortal:O24456 SMR:O24456 IntAct:O24456 STRING:O24456
PaxDb:O24456 PRIDE:O24456 EnsemblPlants:AT1G18080.1 GeneID:838388
KEGG:ath:AT1G18080 GeneFarm:2809 TAIR:At1g18080
HOGENOM:HOG000091643 InParanoid:O24456 KO:K14753 OMA:IRVWQVM
PhylomeDB:O24456 ProtClustDB:CLSN2682135 EvolutionaryTrace:O24456
Genevestigator:O24456 GermOnline:AT1G18080 GO:GO:0010476
Uniprot:O24456
Length = 327
Score = 877 (313.8 bits), Expect = 8.6e-88, P = 8.6e-88
Identities = 165/245 (67%), Positives = 193/245 (78%)
Query: 4 ETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGH 63
E L L+GT+ H VT IAT D I+S SRD ++I+WKLT+DD YGV Q+RL GH
Sbjct: 3 EGLVLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGH 62
Query: 64 SHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 123
SHF+ D+VLSSDG +ALSGSWD LRLWDLAAG +TRRF HTKDVLSVAFS+DNRQIVS
Sbjct: 63 SHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVS 122
Query: 124 SSRDKTIKLWNTLAHCKFTIVE--DGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT 181
+SRD+TIKLWNTL CK+TI E +GH DWVSCVRFSPN P IVSA WD+ VKVWNL+
Sbjct: 123 ASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLS 182
Query: 182 NCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALC 241
NCKL+ +GHTGY++TV VSPDGSLCASGGKD +LWDL +GK L++L N +I ALC
Sbjct: 183 NCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALC 242
Query: 242 FSPNR 246
FSPNR
Sbjct: 243 FSPNR 247
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 102/338 (30%), Positives = 163/338 (48%)
Query: 60 LKGHSHFISDIVLSSDG-NYALSGSWDKTLRLW-----DLAAGKTTRRFEDHTKDVLSVA 113
++ H+ ++ I D + +S S DK++ LW D A G RR H+ V V
Sbjct: 11 MRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVV 70
Query: 114 FSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDR 173
S D + +S S D ++LW+ A T GH+ V V FS +++ IVSA DR
Sbjct: 71 LSSDGQFALSGSWDGELRLWDLAAGVS-TRRFVGHTKDVLSVAFSLDNRQ--IVSASRDR 127
Query: 174 MVKVWN-LTNCKLKINHSG--HTGYLNTVTVSPDG--SLCASGGKDMNAMLWDLNDGKHL 228
+K+WN L CK I+ G H +++ V SP+ S D +W+L++ K
Sbjct: 128 TIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLR 187
Query: 229 HTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRD--V 285
TL H ++ + SP+ S + + ++L+ + GK +SL + +
Sbjct: 188 STLAGHTGYVSTVAVSPDGSL------CASGGKDGVVLLWDLAEGKK---LYSLEANSVI 238
Query: 286 LSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKAD-- 343
++ FS NR + ++ + IK+W DLE+K +VE+L+ D+ +++ KAD
Sbjct: 239 HALCFS-PNRYWLCAATEHGIKIW-----------DLESKSIVEDLKVDLKAEAEKADNS 286
Query: 344 -PPM-------CLSLAWSTDGQTLFAGYSDNTIRVWQV 373
P C SL WS DG TLF+GY+D IRVW +
Sbjct: 287 GPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGI 324
Score = 179 (68.1 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 60/197 (30%), Positives = 91/197 (46%)
Query: 185 LKINHSGHTGYLNTVTVSPDGS-LCASGGKDMNAMLWDLNDGKHLHTLV------HNDII 237
LK HT + + D + + S +D + +LW L + + H+ +
Sbjct: 7 LKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFV 66
Query: 238 TALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQI 297
+ S + F +S + L L+ + G F +DVLSVAFS+DNRQI
Sbjct: 67 EDVVLSSDGQFA-----LSGSWD-GELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQI 120
Query: 298 VSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQ 357
VS+SRD+TIKLWNTL CK+TI + E D VS C+ + +T
Sbjct: 121 VSASRDRTIKLWNTLGECKYTISE------GGEGHRDWVS---------CVRFSPNTLQP 165
Query: 358 TLFAGYSDNTIRVWQVS 374
T+ + D T++VW +S
Sbjct: 166 TIVSASWDKTVKVWNLS 182
>POMBASE|SPAC6B12.15 [details] [associations]
symbol:cpc2 "RACK1 ortholog Cpc2" species:4896
"Schizosaccharomyces pombe" [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IGI] [GO:0031139 "positive regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IGI]
[GO:0032995 "regulation of fungal-type cell wall biogenesis"
evidence=IGI] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0035556 "intracellular signal transduction"
evidence=IMP] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:2000766 "negative regulation of cytoplasmic translation"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC6B12.15 GO:GO:0005737 EMBL:CU329670
GO:GO:0034613 GO:GO:0016020 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0032995
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043022 GO:GO:0032956 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM EMBL:L37885 EMBL:AF320333 EMBL:D89247
PIR:T43158 PIR:T43299 RefSeq:NP_593770.1 ProteinModelPortal:Q10281
SMR:Q10281 IntAct:Q10281 MINT:MINT-1203489 STRING:Q10281
PRIDE:Q10281 EnsemblFungi:SPAC6B12.15.1 GeneID:2543298
KEGG:spo:SPAC6B12.15 OrthoDB:EOG437VPP NextBio:20804316
GO:GO:2000766 GO:GO:0031139 Uniprot:Q10281
Length = 314
Score = 857 (306.7 bits), Expect = 1.1e-85, P = 1.1e-85
Identities = 165/313 (52%), Positives = 212/313 (67%)
Query: 4 ETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGH 63
E L LR TL GH+GWVT ++T P+ PD +LS SRD ++I+W L RDD NYGV Q+RL GH
Sbjct: 3 EQLVLRATLEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGH 62
Query: 64 SHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 123
SHF+SD LS D +YALS SWDKT+RLWDL G+ T +F HT DVLSV+ S DNRQ+VS
Sbjct: 63 SHFVSDCALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVS 122
Query: 124 SSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNC 183
SRDKTIK+WN + +CK+TI + GHSDWVSCVRFSPN N VSAGWD+ VKVW+L
Sbjct: 123 GSRDKTIKIWNIIGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETF 182
Query: 184 KLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCFS 243
L+ +H GHTGY++ VT+SPDGSLCASGG+D MLWDLN+ HL++L I AL FS
Sbjct: 183 SLRTSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYSLEAKANINALVFS 242
Query: 244 PNRSF------QKIKLDISRTLQK-SNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQ 296
PNR + I++ T +K L + + GK + + +S+ +S D +
Sbjct: 243 PNRYWLCAATGSSIRIFDLETQEKVDELTVDFVGVGKKSSE-----PECISLTWSPDGQT 297
Query: 297 IVSSSRDKTIKLW 309
+ S D I++W
Sbjct: 298 LFSGWTDNLIRVW 310
Score = 203 (76.5 bits), Expect = 7.8e-29, Sum P(2) = 7.8e-29
Identities = 66/240 (27%), Positives = 112/240 (46%)
Query: 103 EDHTKDVLSVAFSVDNRQIV-SSSRDKTIKLWNTLAH-CKFTIVE---DGHSDWVS-CVR 156
E H+ V S++ + +N I+ S SRDK+I LWN + + + + GHS +VS C
Sbjct: 12 EGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDCAL 71
Query: 157 FSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMN 216
+H +SA WD+ +++W+L + GHT + +V++SPD SG +D
Sbjct: 72 SFDSHY---ALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKT 128
Query: 217 AMLWDLNDGKHLHTLV---HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGK 273
+W++ G +T+ H+D ++ + FSPN +S K+ + ++ +
Sbjct: 129 IKIWNII-GNCKYTITDGGHSDWVSCVRFSPNPDNLTF---VSAGWDKA-VKVWDLETFS 183
Query: 274 METPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLW--NTLAHCKFTIVDLETKKMVEEL 331
+ T + V +V S D S RD T+ LW N H + LE K + L
Sbjct: 184 LRTSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNESTH----LYSLEAKANINAL 239
Score = 195 (73.7 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 46/143 (32%), Positives = 75/143 (52%)
Query: 185 LKINHSGHTGYLNTVTVSPDG-SLCASGGKDMNAMLW-----DLNDGKHLHTLVHNDIIT 238
L+ GH+G++ +++ +P+ + SG +D + +LW D+N G L +
Sbjct: 7 LRATLEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFV 66
Query: 239 ALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIV 298
+ C S + +T++ L+ + G+ F DVLSV+ S DNRQ+V
Sbjct: 67 SDCALSFDSHYALSASWDKTIR-----LWDLEKGECTHQFVGHTSDVLSVSISPDNRQVV 121
Query: 299 SSSRDKTIKLWNTLAHCKFTIVD 321
S SRDKTIK+WN + +CK+TI D
Sbjct: 122 SGSRDKTIKIWNIIGNCKYTITD 144
Score = 172 (65.6 bits), Expect = 7.8e-29, Sum P(2) = 7.8e-29
Identities = 32/56 (57%), Positives = 41/56 (73%)
Query: 319 IVDLETKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVS 374
I DLET++ V+EL D V K+ P C+SL WS DGQTLF+G++DN IRVWQV+
Sbjct: 258 IFDLETQEKVDELTVDFVGVGKKSSEPECISLTWSPDGQTLFSGWTDNLIRVWQVT 313
Score = 151 (58.2 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 57/219 (26%), Positives = 90/219 (41%)
Query: 14 GHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLS 73
GH V ++ +P ++S SRD T+ IW + + Y + GHS ++S + S
Sbjct: 103 GHTSDVLSVSISPDNRQ-VVSGSRDKTIKIWNII-GNCKYTITDG---GHSDWVSCVRFS 157
Query: 74 S--DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
D +S WDK +++WDL HT V +V S D S RD T+
Sbjct: 158 PNPDNLTFVSAGWDKAVKVWDLETFSLRTSHYGHTGYVSAVTISPDGSLCASGGRDGTLM 217
Query: 132 LW--NTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMV------KVWNLTNC 183
LW N H +++ + ++ + FSPN + R+ KV LT
Sbjct: 218 LWDLNESTHL-YSLEAKAN---INALVFSPNRYWLCAATGSSIRIFDLETQEKVDELTVD 273
Query: 184 KLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
+ + ++T SPDG SG D +W +
Sbjct: 274 FVGVGKKSSEPECISLTWSPDGQTLFSGWTDNLIRVWQV 312
Score = 147 (56.8 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 51/183 (27%), Positives = 92/183 (50%)
Query: 11 TLNGHNGWVTQIATNPKFPD--TILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFIS 68
T GH+ WV+ + +P PD T +S D + +W L +T + + GH+ ++S
Sbjct: 143 TDGGHSDWVSCVRFSPN-PDNLTFVSAGWDKAVKVWDL---ET-FSLRTSHY-GHTGYVS 196
Query: 69 DIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK-DVLSVAFSVDNRQIVSSSRD 127
+ +S DG+ SG D TL LWDL ++T + K ++ ++ FS NR + ++
Sbjct: 197 AVTISPDGSLCASGGRDGTLMLWDL--NESTHLYSLEAKANINALVFS-PNRYWLCAATG 253
Query: 128 KTIKLWNTLAHCK---FTI--VEDGH-SDWVSCVR--FSPNHQNPIIVSAGW-DRMVKVW 178
+I++++ K T+ V G S C+ +SP+ Q + +GW D +++VW
Sbjct: 254 SSIRIFDLETQEKVDELTVDFVGVGKKSSEPECISLTWSPDGQT---LFSGWTDNLIRVW 310
Query: 179 NLT 181
+T
Sbjct: 311 QVT 313
Score = 40 (19.1 bits), Expect = 6.3e-14, Sum P(2) = 6.3e-14
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 353 STDGQTLFAGYSDNTIRVWQVS 374
S DG +G D T+ +W ++
Sbjct: 201 SPDGSLCASGGRDGTLMLWDLN 222
Score = 39 (18.8 bits), Expect = 8.0e-14, Sum P(2) = 8.0e-14
Identities = 8/42 (19%), Positives = 18/42 (42%)
Query: 336 VSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVSVTS 377
++ +D C+ + + D T + D ++VW + S
Sbjct: 142 ITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFS 183
>UNIPROTKB|D6RFX4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0008200 "ion channel
inhibitor activity" evidence=IEA] [GO:0015935 "small ribosomal
subunit" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0090003
"regulation of establishment of protein localization to plasma
membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0017148 GO:GO:0043025 GO:GO:0030425
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008200
HOGENOM:HOG000091643 ChiTaRS:GNB2L1 HGNC:HGNC:4399 GO:GO:0015935
EMBL:AC008443 IPI:IPI00966041 ProteinModelPortal:D6RFX4 SMR:D6RFX4
Ensembl:ENST00000507000 UCSC:uc010jls.3 ArrayExpress:D6RFX4
Bgee:D6RFX4 Uniprot:D6RFX4
Length = 194
Score = 852 (305.0 bits), Expect = 3.8e-85, P = 3.8e-85
Identities = 151/194 (77%), Positives = 169/194 (87%)
Query: 43 IWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF 102
+WKLTRD+TNYG+PQ+ L+GHSHF+SD+V+SSDG +ALSGSWD TLRLWDL G TTRRF
Sbjct: 1 MWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRF 60
Query: 103 EDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQ 162
HTKDVLSVAFS DNRQIVS SRDKTIKLWNTL CK+T+ ++ HS+WVSCVRFSPN
Sbjct: 61 VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSS 120
Query: 163 NPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
NPIIVS GWD++VKVWNL NCKLK NH GHTGYLNTVTVSPDGSLCASGGKD AMLWDL
Sbjct: 121 NPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 180
Query: 223 NDGKHLHTLVHNDI 236
N+GKHL+TL DI
Sbjct: 181 NEGKHLYTLDGGDI 194
Score = 223 (83.6 bits), Expect = 4.0e-18, P = 4.0e-18
Identities = 61/176 (34%), Positives = 90/176 (51%)
Query: 12 LNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV 71
L GH+ +V+ + + LS S D TL +W LT G +R GH+ + +
Sbjct: 18 LRGHSHFVSDVVISSD-GQFALSGSWDGTLRLWDLTT-----GTTTRRFVGHTKDVLSVA 71
Query: 72 LSSDGNYALSGSWDKTLRLWD-LAAGKTTRRFEDHTKDVLSVAFSVD--NRQIVSSSRDK 128
SSD +SGS DKT++LW+ L K T + E H++ V V FS + N IVS DK
Sbjct: 72 FSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDK 131
Query: 129 TIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCK 184
+K+WN LA+CK GH+ +++ V SP+ + S G D +W+L K
Sbjct: 132 LVKVWN-LANCKLKTNHIGHTGYLNTVTVSPD--GSLCASGGKDGQAMLWDLNEGK 184
Score = 171 (65.3 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 41/89 (46%), Positives = 51/89 (57%)
Query: 264 LILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLE 323
L L+ + G F +DVLSVAFS DNRQIVS SRDKTIKLWNTL CK+T+ D
Sbjct: 46 LRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDES 105
Query: 324 TKKMVEELRPDVVSQSTKADPPMCLSLAW 352
+ V +R S + P+ +S W
Sbjct: 106 HSEWVSCVR-----FSPNSSNPIIVSCGW 129
Score = 117 (46.2 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 37/128 (28%), Positives = 59/128 (46%)
Query: 191 GHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HN-DIITALCFSPNRSF 248
GH+ +++ V +S DG SG D LWDL G V H D+++ S NR
Sbjct: 20 GHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQI 79
Query: 249 QKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKL 308
D +T++ N + + ++ S + + + + N IVS DK +K+
Sbjct: 80 VSGSRD--KTIKLWNTL--GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKV 135
Query: 309 WNTLAHCK 316
WN LA+CK
Sbjct: 136 WN-LANCK 142
>GENEDB_PFALCIPARUM|PF08_0019 [details] [associations]
symbol:PF08_0019 "receptor for activated C
kinase homolog, PfRACK" species:5833 "Plasmodium falciparum"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 789 (282.8 bits), Expect = 1.8e-78, P = 1.8e-78
Identities = 161/319 (50%), Positives = 209/319 (65%)
Query: 6 LQLRGTLNG-HNGWVTQIAT--NPKFPDTILSCSRDNTLIIWKLTRDDTN--YGVPQKRL 60
+ LRG L G H+ WVT ++T +PK TI+S SRD LI+W + DD + G +K L
Sbjct: 10 ISLRGVLEGGHSDWVTSVSTPTDPKLK-TIVSASRDKKLIVWNINTDDDSGEIGTAKKSL 68
Query: 61 KGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ 120
GHS I+D+ +SSDG +ALSGSWD ++RLWDL+ G+T R F HT DV SV+FS DNRQ
Sbjct: 69 TGHSQAINDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQ 128
Query: 121 IVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL 180
IVS+SRDKTIKLWNTLA CK+TI + H+DW++CVRFSP+ IIVS GWD++VKVWNL
Sbjct: 129 IVSASRDKTIKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNL 188
Query: 181 TNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITAL 240
NC L N GHTG LNTVT+SPDGSLCASGGKD A LWD+ +GKHL++L I +L
Sbjct: 189 KNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETGSTINSL 248
Query: 241 CFSPNRSFQKIKLD-ISRTLQ-KSNLIL---YPINHGKMETPFFSLFRDVLSVAFSVDNR 295
CFSP + D R +S LI+ YP+ K+ P+ + S+ +S + +
Sbjct: 249 CFSPCDYWLCAATDRFIRIWNLESKLIISEIYPVKQSKIGVPWCT------SLTWSANGQ 302
Query: 296 QIVSSSRDKTIKLWNTLAH 314
+ S D I ++ H
Sbjct: 303 LLYCGSTDGNIYVYEVKKH 321
Score = 186 (70.5 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 51/141 (36%), Positives = 75/141 (53%)
Query: 191 GHTGYLNTVTVSPDGSL--CASGGKDMNAMLWDLN---DGKHLHTLV-----HNDIITAL 240
GH+ ++ +V+ D L S +D ++W++N D + T H+ I +
Sbjct: 19 GHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDV 78
Query: 241 CFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSS 300
S + F +S + S + L+ ++ G+ F DV SV+FS DNRQIVS+
Sbjct: 79 SISSDGLFA-----LSGSWDHS-VRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSA 132
Query: 301 SRDKTIKLWNTLAHCKFTIVD 321
SRDKTIKLWNTLA CK+TI D
Sbjct: 133 SRDKTIKLWNTLAQCKYTITD 153
Score = 38 (18.4 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 7/21 (33%), Positives = 10/21 (47%)
Query: 353 STDGQTLFAGYSDNTIRVWQV 373
S DG +G D ++W V
Sbjct: 210 SPDGSLCASGGKDGVAKLWDV 230
>UNIPROTKB|Q8IBA0 [details] [associations]
symbol:PfRACK "Receptor for activated C kinase homolog,
PfRACK" species:36329 "Plasmodium falciparum 3D7" [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 789 (282.8 bits), Expect = 1.8e-78, P = 1.8e-78
Identities = 161/319 (50%), Positives = 209/319 (65%)
Query: 6 LQLRGTLNG-HNGWVTQIAT--NPKFPDTILSCSRDNTLIIWKLTRDDTN--YGVPQKRL 60
+ LRG L G H+ WVT ++T +PK TI+S SRD LI+W + DD + G +K L
Sbjct: 10 ISLRGVLEGGHSDWVTSVSTPTDPKLK-TIVSASRDKKLIVWNINTDDDSGEIGTAKKSL 68
Query: 61 KGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ 120
GHS I+D+ +SSDG +ALSGSWD ++RLWDL+ G+T R F HT DV SV+FS DNRQ
Sbjct: 69 TGHSQAINDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQ 128
Query: 121 IVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL 180
IVS+SRDKTIKLWNTLA CK+TI + H+DW++CVRFSP+ IIVS GWD++VKVWNL
Sbjct: 129 IVSASRDKTIKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNL 188
Query: 181 TNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITAL 240
NC L N GHTG LNTVT+SPDGSLCASGGKD A LWD+ +GKHL++L I +L
Sbjct: 189 KNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETGSTINSL 248
Query: 241 CFSPNRSFQKIKLD-ISRTLQ-KSNLIL---YPINHGKMETPFFSLFRDVLSVAFSVDNR 295
CFSP + D R +S LI+ YP+ K+ P+ + S+ +S + +
Sbjct: 249 CFSPCDYWLCAATDRFIRIWNLESKLIISEIYPVKQSKIGVPWCT------SLTWSANGQ 302
Query: 296 QIVSSSRDKTIKLWNTLAH 314
+ S D I ++ H
Sbjct: 303 LLYCGSTDGNIYVYEVKKH 321
Score = 186 (70.5 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 51/141 (36%), Positives = 75/141 (53%)
Query: 191 GHTGYLNTVTVSPDGSL--CASGGKDMNAMLWDLN---DGKHLHTLV-----HNDIITAL 240
GH+ ++ +V+ D L S +D ++W++N D + T H+ I +
Sbjct: 19 GHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDV 78
Query: 241 CFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSS 300
S + F +S + S + L+ ++ G+ F DV SV+FS DNRQIVS+
Sbjct: 79 SISSDGLFA-----LSGSWDHS-VRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSA 132
Query: 301 SRDKTIKLWNTLAHCKFTIVD 321
SRDKTIKLWNTLA CK+TI D
Sbjct: 133 SRDKTIKLWNTLAQCKYTITD 153
Score = 38 (18.4 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 7/21 (33%), Positives = 10/21 (47%)
Query: 353 STDGQTLFAGYSDNTIRVWQV 373
S DG +G D ++W V
Sbjct: 210 SPDGSLCASGGKDGVAKLWDV 230
>CGD|CAL0000124 [details] [associations]
symbol:ASC1 species:5476 "Candida albicans" [GO:0005092
"GDP-dissociation inhibitor activity" evidence=IGI;ISA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IGI;ISA]
[GO:0007155 "cell adhesion" evidence=IMP] [GO:0001403 "invasive
growth in response to glucose limitation" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=IEA] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0036244 "cellular response to neutral pH"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0036178 "filamentous growth of a population of unicellular
organisms in response to neutral pH" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0010255 "glucose mediated
signaling pathway" evidence=IEA] [GO:0032995 "regulation of
fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0034613 "cellular protein
localization" evidence=IEA] [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
[GO:0001965 "G-protein alpha-subunit binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 772 (276.8 bits), Expect = 1.1e-76, P = 1.1e-76
Identities = 153/316 (48%), Positives = 208/316 (65%)
Query: 4 ETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTR-DDTNYGVPQKRLKG 62
E L LRGTL GHNGWVT +AT P PD +LS SRD TLI WKLT +D YG+P+K KG
Sbjct: 5 EVLVLRGTLEGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKG 64
Query: 63 HSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 122
HSH + D+ +S+DG YALS SWD+TLRLWDL G+TT+RF H DVLSV+ + + RQIV
Sbjct: 65 HSHIVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQIV 124
Query: 123 SSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTN 182
S+SRDKT+K+WNT+ C T+ GH+DWVS VR SP+ Q+ ++SA WD+ VK W+L +
Sbjct: 125 SASRDKTVKVWNTIGECMATLT--GHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLAD 182
Query: 183 CKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCF 242
+ + GHTGY++ +T+SPDGSLCAS GKD +LWDLN K L+TL + AL F
Sbjct: 183 YSVNADFIGHTGYISCITLSPDGSLCASAGKDGVIILWDLNKNKTLYTLEAKAEVHALAF 242
Query: 243 SPNRSFQKIK----LDISRTLQKSNLILYPINHGKMETPFFSLFRD--VLSVAFSVDNRQ 296
SPNR + + I + LQ+ +L+ + K E + +D +S+A+S D +
Sbjct: 243 SPNRYWLAAATTSGIKIFK-LQERSLL----DELKPEFAVGATAKDPEAISLAWSADGQN 297
Query: 297 IVSSSRDKTIKLWNTL 312
+ + D I++W +
Sbjct: 298 LFAGYTDNVIRVWQVM 313
Score = 157 (60.3 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 30/59 (50%), Positives = 40/59 (67%)
Query: 319 IVDLETKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVSVTS 377
I L+ + +++EL+P+ +T DP +SLAWS DGQ LFAGY+DN IRVWQV S
Sbjct: 259 IFKLQERSLLDELKPEFAVGATAKDPE-AISLAWSADGQNLFAGYTDNVIRVWQVMTPS 316
Score = 152 (58.6 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 41/137 (29%), Positives = 69/137 (50%)
Query: 191 GHTGYLNTVTVSP-DGSLCASGGKDMNAMLWDLNDGKHLHTLV-------HNDIITALCF 242
GH G++ ++ +P L SG +D + W L G+ + H+ I+ +
Sbjct: 15 GHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSHIVQDVTI 74
Query: 243 SPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSR 302
S + ++ + RTL+ L+ + G+ F DVLSV+ + + RQIVS+SR
Sbjct: 75 SADGAYA-LSASWDRTLR-----LWDLETGETTQRFVGHKGDVLSVSIAKNLRQIVSASR 128
Query: 303 DKTIKLWNTLAHCKFTI 319
DKT+K+WNT+ C T+
Sbjct: 129 DKTVKVWNTIGECMATL 145
>UNIPROTKB|P83774 [details] [associations]
symbol:ASC1 "Guanine nucleotide-binding protein subunit
beta-like protein" species:237561 "Candida albicans SC5314"
[GO:0001403 "invasive growth in response to glucose limitation"
evidence=IMP] [GO:0005092 "GDP-dissociation inhibitor activity"
evidence=ISA] [GO:0007155 "cell adhesion" evidence=IMP] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISA]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009405 "pathogenesis" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0036170 "filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036178 "filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:0036180 "filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0036244
"cellular response to neutral pH" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 772 (276.8 bits), Expect = 1.1e-76, P = 1.1e-76
Identities = 153/316 (48%), Positives = 208/316 (65%)
Query: 4 ETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTR-DDTNYGVPQKRLKG 62
E L LRGTL GHNGWVT +AT P PD +LS SRD TLI WKLT +D YG+P+K KG
Sbjct: 5 EVLVLRGTLEGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKG 64
Query: 63 HSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 122
HSH + D+ +S+DG YALS SWD+TLRLWDL G+TT+RF H DVLSV+ + + RQIV
Sbjct: 65 HSHIVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQIV 124
Query: 123 SSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTN 182
S+SRDKT+K+WNT+ C T+ GH+DWVS VR SP+ Q+ ++SA WD+ VK W+L +
Sbjct: 125 SASRDKTVKVWNTIGECMATLT--GHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLAD 182
Query: 183 CKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCF 242
+ + GHTGY++ +T+SPDGSLCAS GKD +LWDLN K L+TL + AL F
Sbjct: 183 YSVNADFIGHTGYISCITLSPDGSLCASAGKDGVIILWDLNKNKTLYTLEAKAEVHALAF 242
Query: 243 SPNRSFQKIK----LDISRTLQKSNLILYPINHGKMETPFFSLFRD--VLSVAFSVDNRQ 296
SPNR + + I + LQ+ +L+ + K E + +D +S+A+S D +
Sbjct: 243 SPNRYWLAAATTSGIKIFK-LQERSLL----DELKPEFAVGATAKDPEAISLAWSADGQN 297
Query: 297 IVSSSRDKTIKLWNTL 312
+ + D I++W +
Sbjct: 298 LFAGYTDNVIRVWQVM 313
Score = 157 (60.3 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 30/59 (50%), Positives = 40/59 (67%)
Query: 319 IVDLETKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVSVTS 377
I L+ + +++EL+P+ +T DP +SLAWS DGQ LFAGY+DN IRVWQV S
Sbjct: 259 IFKLQERSLLDELKPEFAVGATAKDPE-AISLAWSADGQNLFAGYTDNVIRVWQVMTPS 316
Score = 152 (58.6 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 41/137 (29%), Positives = 69/137 (50%)
Query: 191 GHTGYLNTVTVSP-DGSLCASGGKDMNAMLWDLNDGKHLHTLV-------HNDIITALCF 242
GH G++ ++ +P L SG +D + W L G+ + H+ I+ +
Sbjct: 15 GHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSHIVQDVTI 74
Query: 243 SPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSR 302
S + ++ + RTL+ L+ + G+ F DVLSV+ + + RQIVS+SR
Sbjct: 75 SADGAYA-LSASWDRTLR-----LWDLETGETTQRFVGHKGDVLSVSIAKNLRQIVSASR 128
Query: 303 DKTIKLWNTLAHCKFTI 319
DKT+K+WNT+ C T+
Sbjct: 129 DKTVKVWNTIGECMATL 145
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 765 (274.4 bits), Expect = 6.3e-76, P = 6.3e-76
Identities = 141/239 (58%), Positives = 178/239 (74%)
Query: 10 GTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDD-TNYGVPQKRLKGHSHFIS 68
G+L GHNG+VT IA +P+ PDTI+S SRD T+++W+LT D T+ G + LKGHSHF+
Sbjct: 15 GSLVGHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQ 74
Query: 69 DIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDK 128
D+V+S DG +ALSGSWD TLRLWD+ G +TR F+ HT+DV+SVAFS DNRQI+S SRD
Sbjct: 75 DVVISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQIISGSRDA 134
Query: 129 TIKLWNTLAHCKFTIV-EDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKI 187
TIK+WNTL CKFT+ + H DWVSC+RFSPN P IVS WD VK+W++ + K
Sbjct: 135 TIKVWNTLGECKFTLEGPEAHQDWVSCIRFSPN--TPTIVSGSWDNKVKIWDIKSFKCNH 192
Query: 188 NHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCFSPNR 246
+ HTGY+NTVT+SPDGSLCASGGKD A LW+L+ GK L+ L + I AL FSPN+
Sbjct: 193 TLTDHTGYVNTVTISPDGSLCASGGKDTFACLWELSSGKPLYKLEARNTINALAFSPNK 251
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 96/327 (29%), Positives = 161/327 (49%)
Query: 60 LKGHSHFISDIVLSSDG-NYALSGSWDKTLRLWDL------AAGKTTRRFEDHTKDVLSV 112
L GH+ F++ I +S + + +S S DKT+ +W L + GK R + H+ V V
Sbjct: 17 LVGHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQDV 76
Query: 113 AFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWD 172
S D + +S S D T++LW+ + + GH+ V V FS +++ I+S D
Sbjct: 77 VISHDGQFALSGSWDNTLRLWDITKGVSTRLFK-GHTQDVMSVAFSSDNRQ--IISGSRD 133
Query: 173 RMVKVWN-LTNCKLKINH-SGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHT 230
+KVWN L CK + H +++ + SP+ SG D +WD+ K HT
Sbjct: 134 ATIKVWNTLGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKCNHT 193
Query: 231 LV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSL-FRDVLS- 287
L H + + SP+ S + + + L+ ++ GK P + L R+ ++
Sbjct: 194 LTDHTGYVNTVTISPDGSL------CASGGKDTFACLWELSSGK---PLYKLEARNTINA 244
Query: 288 VAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADPPMC 347
+AFS N+ +S++ D I +W+ L K + ++ ++ E+ + +K P C
Sbjct: 245 LAFS-PNKYWLSAATDDKIIIWDLLT--KQVLAEI-VPEVKEQAFDSKKKKESKPKAPAC 300
Query: 348 LSLAWSTDGQTLFAGYSDNTIRVWQVS 374
LSLAWS DG L+AGY+D IRV++ S
Sbjct: 301 LSLAWSADGSVLYAGYNDGLIRVYKSS 327
>SGD|S000004722 [details] [associations]
symbol:ASC1 "G-protein beta subunit and guanine nucleotide
dissociation inhibitor" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0004871 "signal
transducer activity" evidence=IMP;IPI] [GO:0001403 "invasive growth
in response to glucose limitation" evidence=IMP] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0017148
"negative regulation of translation" evidence=IMP] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IMP;IPI]
[GO:0001965 "G-protein alpha-subunit binding" evidence=IPI]
[GO:0005092 "GDP-dissociation inhibitor activity" evidence=IDA]
[GO:0010255 "glucose mediated signaling pathway" evidence=IMP;IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000004722 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0017148 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 EMBL:BK006946 GO:GO:0004871
GO:GO:0001403 EMBL:Z49702 GO:GO:0022627 GO:GO:0010255
HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 GO:GO:0005092 OrthoDB:EOG437VPP
PIR:S54578 RefSeq:NP_013834.1 PDB:1TRJ PDB:3FRX PDB:3IZB PDB:3O2Z
PDB:3O30 PDB:3RFG PDB:3RFH PDB:3U5C PDB:3U5G PDBsum:1TRJ
PDBsum:3FRX PDBsum:3IZB PDBsum:3O2Z PDBsum:3O30 PDBsum:3RFG
PDBsum:3RFH PDBsum:3U5C PDBsum:3U5G ProteinModelPortal:P38011
SMR:P38011 DIP:DIP-6465N IntAct:P38011 MINT:MINT-652105
STRING:P38011 UCD-2DPAGE:P38011 PaxDb:P38011 PeptideAtlas:P38011
EnsemblFungi:YMR116C GeneID:855143 KEGG:sce:YMR116C
EvolutionaryTrace:P38011 NextBio:978537 Genevestigator:P38011
GermOnline:YMR116C Uniprot:P38011
Length = 319
Score = 677 (243.4 bits), Expect = 1.3e-66, P = 1.3e-66
Identities = 141/318 (44%), Positives = 195/318 (61%)
Query: 2 STETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLK 61
S E L LRGTL GHNGWVT +AT+ P+ +LS SRD TLI WKLT DD +GVP + K
Sbjct: 3 SNEVLVLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFK 62
Query: 62 GHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 121
GHSH + D L++DG YALS SWDKTLRLWD+A G+T +RF H DV+SV I
Sbjct: 63 GHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMI 122
Query: 122 VSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQ----NPIIVSAGWDRMVKV 177
+S SRDKTIK+W C T++ GH+DWVS VR PN + + I+SAG D+MVK
Sbjct: 123 ISGSRDKTIKVWTIKGQCLATLL--GHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKA 180
Query: 178 WNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDII 237
WNL +++ + GH +NT+T SPDG+L AS GKD MLW+L K ++TL D +
Sbjct: 181 WNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEV 240
Query: 238 TALCFSPNRSFQKIKLDISRTLQKSNLI-LYPINHGKMETPFFSLFRD--VLSVAFSVDN 294
+L FSPNR + + + ++ +L Y ++ + E +S + +S+A+S D
Sbjct: 241 FSLAFSPNRYW--LAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADG 298
Query: 295 RQIVSSSRDKTIKLWNTL 312
+ + + D I++W +
Sbjct: 299 QTLFAGYTDNVIRVWQVM 316
Score = 177 (67.4 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 57/217 (26%), Positives = 97/217 (44%)
Query: 103 EDHTKDVLSVAFSVDNRQIV-SSSRDKTIKLWN-TLAHCKFTI-VED--GHSDWVSCVRF 157
E H V S+A S ++ S+SRDKT+ W T KF + V GHS V
Sbjct: 14 EGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTL 73
Query: 158 SPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNA 217
+ + +SA WD+ +++W++ + GH + +V + S+ SG +D
Sbjct: 74 TAD--GAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTI 131
Query: 218 MLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMET 276
+W + G+ L TL+ HND ++ + PN + I + + +N ++E
Sbjct: 132 KVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEA 190
Query: 277 PFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA 313
F ++ ++ S D I S+ +D I LWN A
Sbjct: 191 DFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAA 227
Score = 162 (62.1 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 40/90 (44%), Positives = 57/90 (63%)
Query: 284 DVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKAD 343
+V S+AFS NR ++++ IK+++ L+ + +V++LRP+ S KA
Sbjct: 239 EVFSLAFS-PNRYWLAAATATGIKVFS-----------LDPQYLVDDLRPEFAGYS-KAA 285
Query: 344 PPMCLSLAWSTDGQTLFAGYSDNTIRVWQV 373
P +SLAWS DGQTLFAGY+DN IRVWQV
Sbjct: 286 EPHAVSLAWSADGQTLFAGYTDNVIRVWQV 315
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 431 (156.8 bits), Expect = 6.3e-41, Sum P(2) = 6.3e-41
Identities = 112/307 (36%), Positives = 169/307 (55%)
Query: 5 TLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHS 64
T +L TL GH+ V +A +P + S S D T+ +W T G Q+ KGH
Sbjct: 949 TGELLQTLEGHSQSVRSVAFSPDGKQ-LASSSSDTTIKLWNSTT-----GELQQTFKGHD 1002
Query: 65 HFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSS 124
+I + S DG + +SGS D T++LWDLA + + EDH++ V +VAFS D++Q+ SS
Sbjct: 1003 LWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASS 1062
Query: 125 SRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCK 184
S D TIKLW++ A + +GHS V V FSP+ + ++ S +D +K+WN +
Sbjct: 1063 SLDSTIKLWDS-ATGELQRTLEGHSQGVRSVTFSPDGK--LLASNSYDGTIKLWNPLTGE 1119
Query: 185 LKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFS 243
L+ +G + ++++V SPDG ASG D LWD G+ L TL H+D I ++ FS
Sbjct: 1120 LQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFS 1179
Query: 244 PNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRD 303
P+ KL S + ++ + P G++ F + V SVAFS D + + SSS
Sbjct: 1180 PDG-----KLLASGSYDQTAKLWDPAT-GELLQIFEGHSKWVESVAFSPDGKLLASSSYG 1233
Query: 304 KTIKLWN 310
+TIKLW+
Sbjct: 1234 ETIKLWD 1240
Score = 412 (150.1 bits), Expect = 2.5e-39, Sum P(2) = 2.5e-39
Identities = 125/390 (32%), Positives = 189/390 (48%)
Query: 5 TLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHS 64
T +L TL+GH+G V +A +P + S S DNT+ +W D+ G + +GH
Sbjct: 781 TGELLQTLDGHSGTVESLAFSPD-GKLLASGSYDNTIDLW-----DSATGELLQTFEGHP 834
Query: 65 HFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSS 124
H I + + DG S S D T+++WDLA G+ + + H++ V SVAFS D + + SS
Sbjct: 835 HSIWSVAFAPDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASS 894
Query: 125 SRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCK 184
S D TIK+WN A + +G S WV V FSP+ + + S VK+WN +
Sbjct: 895 SLDSTIKVWNP-ATGELQQSLEGRSGWVKSVAFSPDGKK--LASGSEKNTVKLWNPATGE 951
Query: 185 LKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDI-ITALCFS 243
L GH+ + +V SPDG AS D LW+ G+ T +D+ I A+ FS
Sbjct: 952 LLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFS 1011
Query: 244 PNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRD 303
P+ D T++ L+ + +++ R V +VAFS D++Q+ SSS D
Sbjct: 1012 PDGKHLVSGSD-DNTIK-----LWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLD 1065
Query: 304 KTIKLWNTLA-HCKFTIVDLETKKMVEELRPD---VVSQS----TKADPPMC--L----- 348
TIKLW++ + T+ PD + S S K P+ L
Sbjct: 1066 STIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLT 1125
Query: 349 -------SLAWSTDGQTLFAGYSDNTIRVW 371
S+A+S DG+ L +GY D+TI++W
Sbjct: 1126 GRSDWVDSVAFSPDGKQLASGYYDSTIKLW 1155
Score = 402 (146.6 bits), Expect = 7.8e-38, Sum P(2) = 7.8e-38
Identities = 100/301 (33%), Positives = 157/301 (52%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
TL H G V + +P ++S S D+T+ IW D G + L GHS + +
Sbjct: 745 TLENHLGPVESVVFSPDGKQ-LVSGSYDDTVKIW-----DPATGELLQTLDGHSGTVESL 798
Query: 71 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 130
S DG SGS+D T+ LWD A G+ + FE H + SVAF+ D +++ S+S D TI
Sbjct: 799 AFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTI 858
Query: 131 KLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS 190
K+W+ LA + D HS V V FSP+ + ++ S+ D +KVWN +L+ +
Sbjct: 859 KIWD-LATGELQQTLDSHSQSVRSVAFSPDGK--LLASSSLDSTIKVWNPATGELQQSLE 915
Query: 191 GHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQ 249
G +G++ +V SPDG ASG + LW+ G+ L TL H+ + ++ FSP+
Sbjct: 916 GRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGK-- 973
Query: 250 KIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLW 309
++ + + + L+ G+++ F + +VAFS D + +VS S D TIKLW
Sbjct: 974 ----QLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLW 1029
Query: 310 N 310
+
Sbjct: 1030 D 1030
Score = 388 (141.6 bits), Expect = 2.4e-36, Sum P(2) = 2.4e-36
Identities = 103/309 (33%), Positives = 159/309 (51%)
Query: 5 TLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHS 64
T +L+ TL+ H+ V +A +P + S S D+T+ +W G Q+ L+G S
Sbjct: 865 TGELQQTLDSHSQSVRSVAFSPD-GKLLASSSLDSTIKVWNPAT-----GELQQSLEGRS 918
Query: 65 HFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSS 124
++ + S DG SGS T++LW+ A G+ + E H++ V SVAFS D +Q+ SS
Sbjct: 919 GWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASS 978
Query: 125 SRDKTIKLWN-TLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNC 183
S D TIKLWN T + T GH W+ V FSP+ ++ +VS D +K+W+L
Sbjct: 979 SSDTTIKLWNSTTGELQQTF--KGHDLWIRAVAFSPDGKH--LVSGSDDNTIKLWDLATS 1034
Query: 184 KLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCF 242
+L+ + H+ ++ V SPD AS D LWD G+ TL H+ + ++ F
Sbjct: 1035 ELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTF 1094
Query: 243 SPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSR 302
SP+ KL S + + + P+ G+++ V SVAFS D +Q+ S
Sbjct: 1095 SPDG-----KLLASNSYDGTIKLWNPLT-GELQQTLTGRSDWVDSVAFSPDGKQLASGYY 1148
Query: 303 DKTIKLWNT 311
D TIKLW++
Sbjct: 1149 DSTIKLWDS 1157
Score = 381 (139.2 bits), Expect = 7.9e-34, P = 7.9e-34
Identities = 101/311 (32%), Positives = 156/311 (50%)
Query: 2 STETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLK 61
++ T +L+ T GH+ W+ +A +P ++S S DNT+ +W L + Q+ L+
Sbjct: 988 NSTTGELQQTFKGHDLWIRAVAFSPDGKH-LVSGSDDNTIKLWDLATSEL-----QQSLE 1041
Query: 62 GHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 121
HS + + S D S S D T++LWD A G+ R E H++ V SV FS D + +
Sbjct: 1042 DHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLL 1101
Query: 122 VSSSRDKTIKLWNTLA-HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL 180
S+S D TIKLWN L + T+ G SDWV V FSP+ + + S +D +K+W+
Sbjct: 1102 ASNSYDGTIKLWNPLTGELQQTLT--GRSDWVDSVAFSPDGKQ--LASGYYDSTIKLWDS 1157
Query: 181 TNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITA 239
+L GH+ + +V SPDG L ASG D A LWD G+ L H+ + +
Sbjct: 1158 ATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVES 1217
Query: 240 LCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVS 299
+ FSP+ KL S + ++ + P+ G++ SVAFS D ++ S
Sbjct: 1218 VAFSPDG-----KLLASSSYGETIKLWDPVT-GELLQTLNDPDESAGSVAFSPDGNRLAS 1271
Query: 300 SSRDKTIKLWN 310
T K+W+
Sbjct: 1272 VDIFDT-KIWD 1281
Score = 332 (121.9 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
Identities = 84/270 (31%), Positives = 141/270 (52%)
Query: 44 W-KLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF 102
W +L + + + Q+ L+ H + +V S DG +SGS+D T+++WD A G+ +
Sbjct: 729 WSQLPKVEQTWSAEQQTLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTL 788
Query: 103 EDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQ 162
+ H+ V S+AFS D + + S S D TI LW++ A + +GH + V F+P+ +
Sbjct: 789 DGHSGTVESLAFSPDGKLLASGSYDNTIDLWDS-ATGELLQTFEGHPHSIWSVAFAPDGK 847
Query: 163 NPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
+ SA D +K+W+L +L+ H+ + +V SPDG L AS D +W+
Sbjct: 848 E--LASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNP 905
Query: 223 NDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSL 281
G+ +L + + ++ FSP+ KL + +K+ + L+ G++
Sbjct: 906 ATGELQQSLEGRSGWVKSVAFSPDGK----KL--ASGSEKNTVKLWNPATGELLQTLEGH 959
Query: 282 FRDVLSVAFSVDNRQIVSSSRDKTIKLWNT 311
+ V SVAFS D +Q+ SSS D TIKLWN+
Sbjct: 960 SQSVRSVAFSPDGKQLASSSSDTTIKLWNS 989
Score = 157 (60.3 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 44/148 (29%), Positives = 68/148 (45%)
Query: 5 TLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHS 64
T +L TL GH+ + + +P + S S D T +W D G + +GHS
Sbjct: 1159 TGELLQTLEGHSDRIQSVVFSPD-GKLLASGSYDQTAKLW-----DPATGELLQIFEGHS 1212
Query: 65 HFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSS 124
++ + S DG S S+ +T++LWD G+ + D + SVAFS D ++ S
Sbjct: 1213 KWVESVAFSPDGKLLASSSYGETIKLWDPVTGELLQTLNDPDESAGSVAFSPDGNRLASV 1272
Query: 125 SRDKTIKLWNTLAHCKFTIVEDGHSDWV 152
T K+W+ A + GHS WV
Sbjct: 1273 DIFDT-KIWDP-ATGELLQALKGHSKWV 1298
Score = 68 (29.0 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
Identities = 13/41 (31%), Positives = 25/41 (60%)
Query: 336 VSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVSVT 376
+ Q+ K ++A+S DG+ L +G DNTI++W ++ +
Sbjct: 994 LQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATS 1034
Score = 50 (22.7 bits), Expect = 2.5e-39, Sum P(2) = 2.5e-39
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 349 SLAWSTDGQTLFAGYSDNTIRVW 371
S+ +S DG+ L +G D T ++W
Sbjct: 1175 SVVFSPDGKLLASGSYDQTAKLW 1197
Score = 46 (21.3 bits), Expect = 6.3e-41, Sum P(2) = 6.3e-41
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 349 SLAWSTDGQTLFAGYSDNTIRVW 371
S+A+S DG+ L + TI++W
Sbjct: 1217 SVAFSPDGKLLASSSYGETIKLW 1239
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 396 (144.5 bits), Expect = 1.3e-37, Sum P(2) = 1.3e-37
Identities = 99/308 (32%), Positives = 155/308 (50%)
Query: 3 TETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKG 62
T T L+ TL GHN WV + + + S S D T+ IW DT G Q+ LKG
Sbjct: 292 TATSFLQNTLEGHNEWVKSVVFSHD-SRLLASASDDGTVKIW-----DTATGTLQRMLKG 345
Query: 63 HSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 122
H+ + +V S D SGS D+T+R+W+ G FEDH V++V+F+ D+R++
Sbjct: 346 HNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLA 405
Query: 123 SSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTN 182
S+S +K+W+T ++E GH D V+ V FSP+ + ++ SA DR VK+W+
Sbjct: 406 SASDGGNVKIWDTRTGSLQNVLE-GHDDCVNSVSFSPDSR--LLASASDDRTVKIWHAAT 462
Query: 183 CKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALC 241
L+ GH ++ +V S D L AS DM +WD + L H++ + ++
Sbjct: 463 GSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVV 522
Query: 242 FSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSS 301
FS + D T++ ++ G +E V SV+FS D+R + S+S
Sbjct: 523 FSHDSRLLASASD-DMTVK-----IWDTATGSLENTLEGHDDRVNSVSFSPDSRLLASAS 576
Query: 302 RDKTIKLW 309
D T+K+W
Sbjct: 577 DDGTVKIW 584
Score = 338 (124.0 bits), Expect = 1.7e-31, Sum P(2) = 1.7e-31
Identities = 92/281 (32%), Positives = 134/281 (47%)
Query: 32 ILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLW 91
+ S S D T+ IW DT Q L+GH+ ++ +V S D S S D T+++W
Sbjct: 278 LASASGDGTVKIW-----DTATSFLQNTLEGHNEWVKSVVFSHDSRLLASASDDGTVKIW 332
Query: 92 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDW 151
D A G R + H V SV FS D+R I S S D+T+++W T ED H D
Sbjct: 333 DTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGLLRHTFED-HEDS 391
Query: 152 VSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASG 211
V V F+ H + + SA VK+W+ L+ GH +N+V+ SPD L AS
Sbjct: 392 VMAVSFA--HDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASA 449
Query: 212 GKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPIN 270
D +W G TL HND + ++ FS + D T++ + P+
Sbjct: 450 SDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASD-DMTVKIWDTATVPLQ 508
Query: 271 HGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNT 311
+ +E S V SV FS D+R + S+S D T+K+W+T
Sbjct: 509 NN-LE----SHDNWVRSVVFSHDSRLLASASDDMTVKIWDT 544
Score = 334 (122.6 bits), Expect = 4.5e-31, Sum P(2) = 4.5e-31
Identities = 93/309 (30%), Positives = 144/309 (46%)
Query: 3 TETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKG 62
T T L+ L GHN V + + I S S D T+ IW +T G+ + +
Sbjct: 334 TATGTLQRMLKGHNDSVRSVVFSHD-SRLIASGSNDRTVRIW-----ETTTGLLRHTFED 387
Query: 63 HSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 122
H + + + D S S +++WD G E H V SV+FS D+R +
Sbjct: 388 HEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLA 447
Query: 123 SSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTN 182
S+S D+T+K+W+ +E GH+DWV V FS H + +I SA D VK+W+
Sbjct: 448 SASDDRTVKIWHAATGSLQRTLE-GHNDWVRSVVFS--HDSRLIASASDDMTVKIWDTAT 504
Query: 183 CKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALC 241
L+ N H ++ +V S D L AS DM +WD G +TL H+D + ++
Sbjct: 505 VPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVS 564
Query: 242 FSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSS 301
FSP+ D T++ I Y G ++ F R +S+AFS + + S+
Sbjct: 565 FSPDSRLLASASD-DGTVK----IWYAAT-GTVQHTFDGSGRVAISLAFSHTSNLLASAM 618
Query: 302 RDKTIKLWN 310
D T+K+W+
Sbjct: 619 DDGTVKIWD 627
Score = 301 (111.0 bits), Expect = 1.4e-27, Sum P(2) = 1.4e-27
Identities = 78/254 (30%), Positives = 121/254 (47%)
Query: 59 RLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN 118
+ KGH + + S D S S D T+++WD A E H + V SV FS D+
Sbjct: 258 QFKGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDS 317
Query: 119 RQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVW 178
R + S+S D T+K+W+T +++ GH+D V V FS H + +I S DR V++W
Sbjct: 318 RLLASASDDGTVKIWDTATGTLQRMLK-GHNDSVRSVVFS--HDSRLIASGSNDRTVRIW 374
Query: 179 NLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDII 237
T L+ H + V+ + D AS N +WD G + L H+D +
Sbjct: 375 ETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCV 434
Query: 238 TALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQI 297
++ FSP+ D RT++ ++ G ++ V SV FS D+R I
Sbjct: 435 NSVSFSPDSRLLASASD-DRTVK-----IWHAATGSLQRTLEGHNDWVRSVVFSHDSRLI 488
Query: 298 VSSSRDKTIKLWNT 311
S+S D T+K+W+T
Sbjct: 489 ASASDDMTVKIWDT 502
Score = 292 (107.8 bits), Expect = 3.7e-24, P = 3.7e-24
Identities = 82/270 (30%), Positives = 122/270 (45%)
Query: 3 TETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKG 62
T T LR T H V ++ + S S + IW DT G Q L+G
Sbjct: 376 TTTGLLRHTFEDHEDSVMAVSFAHD-SRRLASASDGGNVKIW-----DTRTGSLQNVLEG 429
Query: 63 HSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 122
H ++ + S D S S D+T+++W A G R E H V SV FS D+R I
Sbjct: 430 HDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIA 489
Query: 123 SSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTN 182
S+S D T+K+W+T A + H +WV V FS H + ++ SA D VK+W+
Sbjct: 490 SASDDMTVKIWDT-ATVPLQNNLESHDNWVRSVVFS--HDSRLLASASDDMTVKIWDTAT 546
Query: 183 CKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHND-IITALC 241
L+ GH +N+V+ SPD L AS D +W G HT + + +L
Sbjct: 547 GSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIWYAATGTVQHTFDGSGRVAISLA 606
Query: 242 FSPNRSFQKIKLDISRTLQKSNLILYPINH 271
FS + +D T++ ++ +Y + H
Sbjct: 607 FSHTSNLLASAMD-DGTVKIWDMEIYSLRH 635
Score = 269 (99.8 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 73/245 (29%), Positives = 112/245 (45%)
Query: 3 TETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKG 62
T T L+ L GH+ V ++ +P + S S D T+ IW G Q+ L+G
Sbjct: 418 TRTGSLQNVLEGHDDCVNSVSFSPD-SRLLASASDDRTVKIWHAAT-----GSLQRTLEG 471
Query: 63 HSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 122
H+ ++ +V S D S S D T+++WD A E H V SV FS D+R +
Sbjct: 472 HNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLA 531
Query: 123 SSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTN 182
S+S D T+K+W+T +E GH D V+ V FSP+ + ++ SA D VK+W
Sbjct: 532 SASDDMTVKIWDTATGSLENTLE-GHDDRVNSVSFSPDSR--LLASASDDGTVKIWYAAT 588
Query: 183 CKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCF 242
++ G ++ S +L AS D +WD+ HT + I + F
Sbjct: 589 GTVQHTFDGSGRVAISLAFSHTSNLLASAMDDGTVKIWDMEIYSLRHTFDLDHEIQRIQF 648
Query: 243 SPNRS 247
+ S
Sbjct: 649 DKSMS 653
Score = 265 (98.3 bits), Expect = 3.1e-21, Sum P(2) = 3.1e-21
Identities = 69/232 (29%), Positives = 116/232 (50%)
Query: 80 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHC 139
+SG L+++ A + +F+ H + V SV+FS D+R + S+S D T+K+W+T
Sbjct: 237 ISGIKCAPLQVYASALLFSPAQFKGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSF 296
Query: 140 KFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTV 199
+E GH++WV V FS H + ++ SA D VK+W+ L+ GH + +V
Sbjct: 297 LQNTLE-GHNEWVKSVVFS--HDSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSV 353
Query: 200 TVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRT 258
S D L ASG D +W+ G HT H D + A+ F+ + ++
Sbjct: 354 VFSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSR------RLASA 407
Query: 259 LQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWN 310
N+ ++ G ++ V SV+FS D+R + S+S D+T+K+W+
Sbjct: 408 SDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWH 459
Score = 54 (24.1 bits), Expect = 1.3e-37, Sum P(2) = 1.3e-37
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 346 MCLSLAWSTDGQTLFAGYSDNTIRVWQVSVTS 377
+ +SLA+S L + D T+++W + + S
Sbjct: 601 VAISLAFSHTSNLLASAMDDGTVKIWDMEIYS 632
Score = 47 (21.6 bits), Expect = 6.9e-37, Sum P(2) = 6.9e-37
Identities = 7/23 (30%), Positives = 15/23 (65%)
Query: 349 SLAWSTDGQTLFAGYSDNTIRVW 371
S+++S D + L + D T+++W
Sbjct: 562 SVSFSPDSRLLASASDDGTVKIW 584
Score = 46 (21.3 bits), Expect = 1.2e-30, Sum P(2) = 1.2e-30
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 349 SLAWSTDGQTLFAGYSDNTIRVWQVSVTS 377
S+ +S D + L + D T+++W + S
Sbjct: 520 SVVFSHDSRLLASASDDMTVKIWDTATGS 548
Score = 42 (19.8 bits), Expect = 2.5e-26, Sum P(2) = 2.5e-26
Identities = 6/26 (23%), Positives = 15/26 (57%)
Query: 349 SLAWSTDGQTLFAGYSDNTIRVWQVS 374
S+ +S D + + + D T+++W +
Sbjct: 478 SVVFSHDSRLIASASDDMTVKIWDTA 503
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 345 (126.5 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
Identities = 92/300 (30%), Positives = 144/300 (48%)
Query: 14 GHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLS 73
GH +T +P I + S D L++W L Y R GH ++ + S
Sbjct: 16 GHKAAITSADFSPNCKQ-IATASWDTFLMLWSLKPHARAY-----RYVGHKDVVTSLQFS 69
Query: 74 SDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKL 132
GN S S DKT+RLW L GK++ F+ HT V SV FS D + +V++S DK+IK+
Sbjct: 70 PQGNLLASASRDKTVRLWVLDRKGKSSE-FKAHTAPVRSVDFSADGQFLVTASEDKSIKV 128
Query: 133 WNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGH 192
W+ +F H+ WV C +FSP+ + +IVS D+ +K+W+ T+ + N S
Sbjct: 129 WSMYRQ-RFLYSLYRHTHWVRCAKFSPDGR--LIVSCSEDKTIKIWDTTSKQCVNNFSDS 185
Query: 193 TGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHL-HTLVHNDIITALCFSPNRSFQKI 251
G+ N V SP+G+ AS G D +WD+ + L H VH+ + L F P+ + +
Sbjct: 186 VGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGN-SLV 244
Query: 252 KLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNT 311
T++ +L+ G++ V +V+FS D S D + +W T
Sbjct: 245 TASSDGTVKILDLV-----EGRLIYTLQGHTGPVFTVSFSKDGELFTSGGADAQVLVWRT 299
Score = 202 (76.2 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
Identities = 54/190 (28%), Positives = 86/190 (45%)
Query: 57 QKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 116
++ KGH I+ S + + SWD L LW L R+ H V S+ FS
Sbjct: 11 ERYFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSP 70
Query: 117 DNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVK 176
+ S+SRDKT++LW K + + H+ V V FS + Q +V+A D+ +K
Sbjct: 71 QGNLLASASRDKTVRLWVLDRKGKSSEFK-AHTAPVRSVDFSADGQ--FLVTASEDKSIK 127
Query: 177 VWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHN-D 235
VW++ + + HT ++ SPDG L S +D +WD + ++ +
Sbjct: 128 VWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVG 187
Query: 236 IITALCFSPN 245
+ FSPN
Sbjct: 188 FANFVDFSPN 197
Score = 47 (21.6 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 349 SLAWSTDGQTLFAGYSDNTIRVWQVS 374
++++S DG+ +G +D + VW+ S
Sbjct: 275 TVSFSKDGELFTSGGADAQVLVWRTS 300
Score = 43 (20.2 bits), Expect = 8.0e-14, Sum P(2) = 8.0e-14
Identities = 6/22 (27%), Positives = 14/22 (63%)
Query: 352 WSTDGQTLFAGYSDNTIRVWQV 373
+S +G + + SD+ +R+W +
Sbjct: 194 FSPNGTCIASAGSDHAVRIWDI 215
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 97/314 (30%), Positives = 149/314 (47%)
Query: 8 LRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFI 67
L + GH +T +P I + S D L++W L Y R GH +
Sbjct: 10 LERSFKGHKAAITSADFSPNCKQ-IATASWDTFLMLWSLKPHARAY-----RYVGHKDVV 63
Query: 68 SDIVLSSDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSR 126
+ + S GN S S D+T+RLW L GK++ F+ HT V SV FS D + +V++S
Sbjct: 64 TSLQFSPQGNLLASASRDRTVRLWVLDRKGKSSE-FKAHTAPVRSVDFSADGQLLVTASE 122
Query: 127 DKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLK 186
DK+IK+W+ +F H+ WV C +FSP+ + +IVS D+ +K+W+ TN +
Sbjct: 123 DKSIKVWSMFRQ-RFLYSLYRHTHWVRCAKFSPDGR--LIVSCSEDKTIKIWDTTNKQCV 179
Query: 187 INHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHL-HTLVHNDIITALCFSPN 245
N S G+ N V +P+G+ AS G D +WD+ K L H VH+ + L F P
Sbjct: 180 NNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPL 239
Query: 246 RSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKT 305
+ + T++ +LI G++ V +V+FS D + S D
Sbjct: 240 GN-SLVTASSDGTVKMLDLI-----EGRLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQ 293
Query: 306 IKLWNTL---AHCK 316
+ +W T HCK
Sbjct: 294 VLIWRTNFIHLHCK 307
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 328 (120.5 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
Identities = 97/318 (30%), Positives = 154/318 (48%)
Query: 2 STETLQLRGTLNGHNGWVTQI--ATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKR 59
S E L GH VT + + N K + S S D+TL+IW + Y R
Sbjct: 5 SQEDPSLERHFKGHRDAVTCVDFSLNTKH---LASGSMDSTLMIWHMKPQSRAY-----R 56
Query: 60 LKGHSHFISDIVLSSDGNYALSGSWDKTLRLW-DLAAGKTTRRFEDHTKDVLSVAFSVDN 118
GH ++ + S G+ SGS DKT+R+W G++T F HT V SV F D
Sbjct: 57 FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTV-FRAHTATVRSVHFCSDG 115
Query: 119 RQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVW 178
+ +V++S DKT+K+W+T +F H +WV C +FSP+ + +IVSA D+ VK+W
Sbjct: 116 QLLVTASDDKTVKVWSTHRQ-RFLFSLTQHINWVRCAKFSPDGR--LIVSASDDKTVKLW 172
Query: 179 NLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHL-HTLVHNDII 237
+ T+ + ++ H G++ V P G+ A+ G D +WD + + H +H+ +
Sbjct: 173 DKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAV 232
Query: 238 TALCFSPNRSFQKIKLDISRTLQKSNL----ILYPINHGKMETPFFSLFRDVLSVAFSVD 293
AL F P+ ++ I TL+ +L +LY + HG + P +VAFS
Sbjct: 233 NALSFHPSGNYL-ITASSDSTLKILDLMEGRLLYTL-HGH-QGP-------ATTVAFSRT 282
Query: 294 NRQIVSSSRDKTIKLWNT 311
S D+ + +W +
Sbjct: 283 GEYFASGGSDEQVMVWKS 300
Score = 206 (77.6 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 54/192 (28%), Positives = 88/192 (45%)
Query: 32 ILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLW 91
+++ S D T+ +W R + + Q H +++ S DG +S S DKT++LW
Sbjct: 118 LVTASDDKTVKVWSTHRQRFLFSLTQ-----HINWVRCAKFSPDGRLIVSASDDKTVKLW 172
Query: 92 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDW 151
D + + + +H V V F I ++ D T+K+W+T H + HS
Sbjct: 173 DKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTH-RLVQHYQLHSAA 231
Query: 152 VSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASG 211
V+ + F P+ +++A D +K+ +L +L GH G TV S G ASG
Sbjct: 232 VNALSFHPSGN--YLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASG 289
Query: 212 GKDMNAMLWDLN 223
G D M+W N
Sbjct: 290 GSDEQVMVWKSN 301
Score = 182 (69.1 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 55/217 (25%), Positives = 93/217 (42%)
Query: 100 RRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSP 159
R F+ H V V FS++ + + S S D T+ +W+ + GH D V+CV FSP
Sbjct: 13 RHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSR-AYRFTGHKDAVTCVNFSP 71
Query: 160 NHQNPIIVSAGWDRMVKVWNLTNCKLKIN-HSGHTGYLNTVTVSPDGSLCASGGKDMNAM 218
+ ++ S D+ V++W + N K + HT + +V DG L + D
Sbjct: 72 SGH--LLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVK 128
Query: 219 LWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETP 277
+W + + L +L H + + FSP+ D +T++ + H E
Sbjct: 129 VWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASD-DKTVKLWDKTSRECVHSYCEHG 187
Query: 278 FFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAH 314
F + D F I ++ D T+K+W+T H
Sbjct: 188 GFVTYVD-----FHPSGTCIAAAGMDNTVKVWDTRTH 219
Score = 44 (20.5 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 349 SLAWSTDGQTLFAGYSDNTIRVWQ 372
++A+S G+ +G SD + VW+
Sbjct: 276 TVAFSRTGEYFASGGSDEQVMVWK 299
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 92/264 (34%), Positives = 129/264 (48%)
Query: 49 DDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKD 108
D + G+ Q L+GHS + + S +G SGS D T++LW+ A+ E H+
Sbjct: 69 DPASGGLKQT-LEGHSSSVQSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDR 127
Query: 109 VLSVAFSVDNRQIVSSSRDKTIKLWN-TLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIV 167
V SVAFS N Q LWN + K TI +GHSDWV V FSP+ Q ++
Sbjct: 128 VESVAFS-PNGQ-----------LWNPAIGSLKHTI--EGHSDWVLSVAFSPDGQ--LLA 171
Query: 168 SAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKH 227
S ++ +K+W+ C LK GH+ ++ + SPDG L ASG D LWD G
Sbjct: 172 SGSAEKTIKLWDSATCGLKHTLGGHSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSL 231
Query: 228 LHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVL 286
HTL H++ I +L FSPN ++ + + L+ G VL
Sbjct: 232 KHTLEGHSNKIESLAFSPNGQL------LASGSSDATIKLWDTATGSFRHTLKGHSDMVL 285
Query: 287 SVAFSVDNRQIVSSSRDKTIKLWN 310
SV FS D++ + S S D TIKLW+
Sbjct: 286 SVVFSPDSQLLESGSGDNTIKLWD 309
Score = 301 (111.0 bits), Expect = 1.6e-32, Sum P(2) = 1.6e-32
Identities = 76/198 (38%), Positives = 104/198 (52%)
Query: 50 DTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 109
+ N+G + L+GHS +I + S DG SGS D T++LWD A+G + E H+ V
Sbjct: 27 EDNWGPELQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSV 86
Query: 110 LSVAFSVDNRQIVSSSRDKTIKLWNTLAHC-KFTIVEDGHSDWVSCVRFSPNHQNPIIVS 168
SVAFS + + + S S D TIKLWN+ + K T+ +GHSD V V FSPN Q
Sbjct: 87 QSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTM--EGHSDRVESVAFSPNGQ------ 138
Query: 169 AGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHL 228
+WN LK GH+ ++ +V SPDG L ASG + LWD
Sbjct: 139 --------LWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLK 190
Query: 229 HTLV-HNDIITALCFSPN 245
HTL H++ + L FSP+
Sbjct: 191 HTLGGHSNWVLPLVFSPD 208
Score = 272 (100.8 bits), Expect = 2.4e-22, P = 2.4e-22
Identities = 69/196 (35%), Positives = 103/196 (52%)
Query: 8 LRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFI 67
L+ T+ GH+ WV +A +P + S S + T+ +W D G+ + L GHS+++
Sbjct: 147 LKHTIEGHSDWVLSVAFSPD-GQLLASGSAEKTIKLW----DSATCGL-KHTLGGHSNWV 200
Query: 68 SDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRD 127
+V S DG SGS D T++LWD +G E H+ + S+AFS + + + S S D
Sbjct: 201 LPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSD 260
Query: 128 KTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKI 187
TIKLW+T A F GHSD V V FSP+ Q ++ S D +K+W+ LK
Sbjct: 261 ATIKLWDT-ATGSFRHTLKGHSDMVLSVVFSPDSQ--LLESGSGDNTIKLWDPATGILK- 316
Query: 188 NHSGHT-GYLNTVTVS 202
HS T G + ++ S
Sbjct: 317 -HSMRTPGIVRSIEFS 331
Score = 269 (99.8 bits), Expect = 7.7e-27, Sum P(2) = 7.7e-27
Identities = 62/185 (33%), Positives = 94/185 (50%)
Query: 60 LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 119
++GHS ++ + S DG SGS +KT++LWD A H+ VL + FS D R
Sbjct: 151 IEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPLVFSPDGR 210
Query: 120 QIVSSSRDKTIKLWNTLA-HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVW 178
+ S S D TIKLW+ + K T+ +GHS+ + + FSPN Q ++ S D +K+W
Sbjct: 211 LLASGSNDATIKLWDPPSGSLKHTL--EGHSNKIESLAFSPNGQ--LLASGSSDATIKLW 266
Query: 179 NLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIIT 238
+ + GH+ + +V SPD L SG D LWD G H++ I+
Sbjct: 267 DTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWDPATGILKHSMRTPGIVR 326
Query: 239 ALCFS 243
++ FS
Sbjct: 327 SIEFS 331
Score = 209 (78.6 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 49/130 (37%), Positives = 69/130 (53%)
Query: 5 TLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHS 64
T L+ TL GH+ WV + +P + S S D T+ +W D G + L+GHS
Sbjct: 186 TCGLKHTLGGHSNWVLPLVFSPD-GRLLASGSNDATIKLW-----DPPSGSLKHTLEGHS 239
Query: 65 HFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSS 124
+ I + S +G SGS D T++LWD A G + H+ VLSV FS D++ + S
Sbjct: 240 NKIESLAFSPNGQLLASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESG 299
Query: 125 SRDKTIKLWN 134
S D TIKLW+
Sbjct: 300 SGDNTIKLWD 309
Score = 159 (61.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 41/129 (31%), Positives = 67/129 (51%)
Query: 8 LRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFI 67
L+ TL GH+ + +A +P + S S D T+ +W DT G + LKGHS +
Sbjct: 231 LKHTLEGHSNKIESLAFSPN-GQLLASGSSDATIKLW-----DTATGSFRHTLKGHSDMV 284
Query: 68 SDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVL-SVAFSVDNRQIVSSSR 126
+V S D SGS D T++LWD A G + T ++ S+ FS++ Q++++
Sbjct: 285 LSVVFSPDSQLLESGSGDNTIKLWDPATG--ILKHSMRTPGIVRSIEFSIELPQLITNLG 342
Query: 127 DKTIKLWNT 135
+I+ W+T
Sbjct: 343 TFSIQAWHT 351
Score = 154 (59.3 bits), Expect = 2.0e-22, Sum P(3) = 2.0e-22
Identities = 38/111 (34%), Positives = 57/111 (51%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
TL GH+ W+ + +P + S S D T+ +W D + G+ Q L+GHS + +
Sbjct: 36 TLEGHSDWIETVTFSPD-GRLLASGSNDTTIKLW----DPASGGLKQT-LEGHSSSVQSV 89
Query: 71 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 121
S +G SGS D T++LW+ A+ E H+ V SVAFS N Q+
Sbjct: 90 AFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFS-PNGQL 139
Score = 146 (56.5 bits), Expect = 2.0e-22, Sum P(3) = 2.0e-22
Identities = 41/137 (29%), Positives = 65/137 (47%)
Query: 176 KVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HN 234
++WN LK GH+ ++ +V SPDG L ASG + LWD HTL H+
Sbjct: 138 QLWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHS 197
Query: 235 DIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDN 294
+ + L FSP+ ++ + + L+ G ++ + S+AFS +
Sbjct: 198 NWVLPLVFSPDGRL------LASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNG 251
Query: 295 RQIVSSSRDKTIKLWNT 311
+ + S S D TIKLW+T
Sbjct: 252 QLLASGSSDATIKLWDT 268
Score = 82 (33.9 bits), Expect = 7.2e-16, Sum P(3) = 7.2e-16
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 285 VLSVAFSVDNRQIVSSSRDKTIKLWNTLAHC 315
VLSVAFS D + + S S +KTIKLW++ A C
Sbjct: 158 VLSVAFSPDGQLLASGSAEKTIKLWDS-ATC 187
Score = 76 (31.8 bits), Expect = 7.7e-27, Sum P(2) = 7.7e-27
Identities = 19/69 (27%), Positives = 32/69 (46%)
Query: 8 LRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFI 67
L+ TL GH+ V +A +P + S S D T+ +W D + ++GHS +
Sbjct: 75 LKQTLEGHSSSVQSVAFSPN-GQLLASGSSDTTIKLWNSASDSLKH-----TMEGHSDRV 128
Query: 68 SDIVLSSDG 76
+ S +G
Sbjct: 129 ESVAFSPNG 137
Score = 70 (29.7 bits), Expect = 1.6e-32, Sum P(2) = 1.6e-32
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 341 KADPPMCLSLAWSTDGQTLFAGYSDNTIRVW 371
K M LS+ +S D Q L +G DNTI++W
Sbjct: 278 KGHSDMVLSVVFSPDSQLLESGSGDNTIKLW 308
Score = 68 (29.0 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 349 SLAWSTDGQTLFAGYSDNTIRVWQVSVTS 377
SLA+S +GQ L +G SD TI++W + S
Sbjct: 244 SLAFSPNGQLLASGSSDATIKLWDTATGS 272
Score = 58 (25.5 bits), Expect = 3.0e-31, Sum P(2) = 3.0e-31
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 348 LSLAWSTDGQTLFAGYSDNTIRVW 371
L L +S DG+ L +G +D TI++W
Sbjct: 201 LPLVFSPDGRLLASGSNDATIKLW 224
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 319 (117.4 bits), Expect = 6.9e-32, Sum P(2) = 6.9e-32
Identities = 102/319 (31%), Positives = 150/319 (47%)
Query: 4 ETLQLRGTLNGHNGWVTQI--ATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKR-- 59
E L GH +T + + N K + S S D+ L IW + PQ R
Sbjct: 8 EDPSLERHFRGHRDAITSVDFSLNKK---QLASGSMDSCLKIWSMK--------PQMRAY 56
Query: 60 -LKGHSHFISDIVLSSDGNYALSGSWDKTLRLW-DLAAGKTTRRFEDHTKDVLSVAFSVD 117
L GH + + S G+ SGS DKT+ LW G++T F+ HT V SV FS D
Sbjct: 57 CLVGHKDAVMCVQFSPSGHLVASGSRDKTVCLWVPSVKGESTV-FKAHTATVRSVHFSSD 115
Query: 118 NRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKV 177
+ +V++S DKTIK+W T+ KF H +WV C RFSP+ + +I SA D+ VK+
Sbjct: 116 GQSLVTASDDKTIKVW-TVHRQKFLFSLSQHINWVRCARFSPDGR--LIASASDDKTVKL 172
Query: 178 WNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHL-HTLVHNDI 236
W+ T+ + + H G+ N V P G+ A+ G D +WD+ + L H VH
Sbjct: 173 WDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAA 232
Query: 237 ITALCFSPNRSFQKIKLDISRTLQKSNLI----LYPINHGKMETPFFSLFRDVLSVAFSV 292
+ +L F P+ ++ I TL+ +L+ LY + HG + P VAFS
Sbjct: 233 VNSLSFHPSGNYL-ITASNDSTLKILDLLEGRLLYTL-HGH-QGP-------ATCVAFSR 282
Query: 293 DNRQIVSSSRDKTIKLWNT 311
S D+ + +W T
Sbjct: 283 TGDFFASGGSDEQVMVWKT 301
Score = 227 (85.0 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 63/257 (24%), Positives = 112/257 (43%)
Query: 57 QKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 116
++ +GH I+ + S + SGS D L++W + H V+ V FS
Sbjct: 13 ERHFRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFSP 72
Query: 117 DNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVK 176
+ S SRDKT+ LW + T+ + H+ V V FS + Q+ +V+A D+ +K
Sbjct: 73 SGHLVASGSRDKTVCLWVPSVKGESTVFK-AHTATVRSVHFSSDGQS--LVTASDDKTIK 129
Query: 177 VWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HND 235
VW + K + S H ++ SPDG L AS D LWD + +H+ H
Sbjct: 130 VWTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGG 189
Query: 236 IITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNR 295
+ F P+ + I+ + ++ + ++ + V S++F
Sbjct: 190 FANHVEFHPSGTC------IAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGN 243
Query: 296 QIVSSSRDKTIKLWNTL 312
++++S D T+K+ + L
Sbjct: 244 YLITASNDSTLKILDLL 260
Score = 188 (71.2 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 51/193 (26%), Positives = 87/193 (45%)
Query: 31 TILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRL 90
++++ S D T+ +W + R + + Q H +++ S DG S S DKT++L
Sbjct: 118 SLVTASDDKTIKVWTVHRQKFLFSLSQ-----HINWVRCARFSPDGRLIASASDDKTVKL 172
Query: 91 WDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSD 150
WD + + F +H V F I ++ DKT+K+W+ + + H+
Sbjct: 173 WDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMN-RLLQHYQVHTA 231
Query: 151 WVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCAS 210
V+ + F P+ +++A D +K+ +L +L GH G V S G AS
Sbjct: 232 AVNSLSFHPSGN--YLITASNDSTLKILDLLEGRLLYTLHGHQGPATCVAFSRTGDFFAS 289
Query: 211 GGKDMNAMLWDLN 223
GG D M+W N
Sbjct: 290 GGSDEQVMVWKTN 302
Score = 46 (21.3 bits), Expect = 6.9e-32, Sum P(2) = 6.9e-32
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 344 PPMCLSLAWSTDGQTLFAGYSDNTIRVWQVSVTS 377
P C+ A+S G +G SD + VW+ + ++
Sbjct: 274 PATCV--AFSRTGDFFASGGSDEQVMVWKTNFSA 305
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 320 (117.7 bits), Expect = 8.8e-32, Sum P(2) = 8.8e-32
Identities = 98/326 (30%), Positives = 154/326 (47%)
Query: 4 ETLQLRGTLNGHNGWVTQI--ATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLK 61
E L GH VT + + N K + S S D+ L++W + Y R
Sbjct: 7 EDPSLERHFKGHRDAVTCVDFSINTK---QLASGSMDSCLMVWHMKPQSRAY-----RFT 58
Query: 62 GHSHFISDIVLSSDGNYALSGSWDKTLRLW-DLAAGKTTRRFEDHTKDVLSVAFSVDNRQ 120
GH ++ + S G+ SGS DKT+R+W G++T F HT V SV F D +
Sbjct: 59 GHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTV-FRAHTATVRSVHFCSDGQS 117
Query: 121 IVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL 180
V++S DKT+K+W T KF H +WV C +FSP+ + +IVSA D+ VK+W+
Sbjct: 118 FVTASDDKTVKVWATHRQ-KFLFSLSQHINWVRCAKFSPDGR--LIVSASDDKTVKLWDK 174
Query: 181 TNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHL-HTLVHNDIITA 239
++ + ++ H G++ V P G+ A+ G D +WD+ + L H +H+ +
Sbjct: 175 SSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNG 234
Query: 240 LCFSPNRSFQKIKLDISRTLQKSNL----ILYPINHGKMETPFFSLFRDVLSVAFSVDNR 295
L F P+ ++ I TL+ +L +LY + HG + P +VAFS
Sbjct: 235 LSFHPSGNYL-ITASSDSTLKILDLMEGRLLYTL-HGH-QGP-------ATTVAFSRTGE 284
Query: 296 QIVSSSRDKTIKLWNTLAHCKFTIVD 321
S D+ + +W + F IVD
Sbjct: 285 YFASGGSDEQVMVWKS----NFDIVD 306
Score = 44 (20.5 bits), Expect = 8.8e-32, Sum P(2) = 8.8e-32
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 349 SLAWSTDGQTLFAGYSDNTIRVWQ 372
++A+S G+ +G SD + VW+
Sbjct: 276 TVAFSRTGEYFASGGSDEQVMVWK 299
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 95/312 (30%), Positives = 146/312 (46%)
Query: 2 STETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLK 61
S E L GH +T + +P + + S D L++W L + R
Sbjct: 4 SPEDPVLERYFKGHKAAITSVDFSPNGKQ-LATGSWDTFLMLWSLRPQARAF-----RYV 57
Query: 62 GHSHFISDIVLSSDGNYALSGSWDKTLRLW-DLAAGKTTRRFEDHTKDVLSVAFSVDNRQ 120
GH I+ + S GN S S D+T+RLW GK++ F+ HT V SV FS D +
Sbjct: 58 GHKDVITSVQFSPLGNLLASASRDRTIRLWIPDKRGKSSE-FKAHTAPVRSVDFSADGQF 116
Query: 121 IVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL 180
+ S+S DK+IK+WN +F H+ WV C +FSP+ + +IVS D+ +K+W+
Sbjct: 117 LASASEDKSIKVWNMYRQ-RFLYSLYRHTHWVRCAKFSPDGR--LIVSCSEDKTIKIWDT 173
Query: 181 TNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHL-HTLVHNDIITA 239
TN + N S G+ N V +P+G+ AS G D +WD+ K L H VH+ +
Sbjct: 174 TNKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNC 233
Query: 240 LCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVS 299
+ F P+ ++ I TL+ +L+ G++ V +V+FS S
Sbjct: 234 VSFHPSGNYL-ITASSDGTLKILDLL-----EGRLIYTLQGHTGPVFTVSFSKGGELFTS 287
Query: 300 SSRDKTIKLWNT 311
D + LW T
Sbjct: 288 GGADAQVLLWRT 299
Score = 235 (87.8 bits), Expect = 2.7e-17, P = 2.7e-17
Identities = 59/192 (30%), Positives = 91/192 (47%)
Query: 32 ILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLW 91
+ S S D ++ +W + R Y L H+H++ S DG +S S DKT+++W
Sbjct: 117 LASASEDKSIKVWNMYRQRFLYS-----LYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW 171
Query: 92 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDW 151
D + F D VAF+ + I S+ D T+K+W+ + K HS
Sbjct: 172 DTTNKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVN-KLLQHYQVHSGG 230
Query: 152 VSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASG 211
V+CV F P+ +++A D +K+ +L +L GHTG + TV+ S G L SG
Sbjct: 231 VNCVSFHPSGN--YLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSG 288
Query: 212 GKDMNAMLWDLN 223
G D +LW N
Sbjct: 289 GADAQVLLWRTN 300
Score = 230 (86.0 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 72/262 (27%), Positives = 121/262 (46%)
Query: 55 VPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVL-SVA 113
V ++ KGH I+ + S +G +GSWD L LW L R+ H KDV+ SV
Sbjct: 9 VLERYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGH-KDVITSVQ 67
Query: 114 FSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDR 173
FS + S+SRD+TI+LW K + + H+ V V FS + Q + SA D+
Sbjct: 68 FSPLGNLLASASRDRTIRLWIPDKRGKSSEFK-AHTAPVRSVDFSADGQ--FLASASEDK 124
Query: 174 MVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVH 233
+KVWN+ + + HT ++ SPDG L S +D +WD + + ++
Sbjct: 125 SIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNF-- 182
Query: 234 NDII---TALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAF 290
+D + + F+PN + I+ + ++ I K+ + V V+F
Sbjct: 183 SDFVGFANFVAFNPNGTC------IASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSF 236
Query: 291 SVDNRQIVSSSRDKTIKLWNTL 312
++++S D T+K+ + L
Sbjct: 237 HPSGNYLITASSDGTLKILDLL 258
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 95/320 (29%), Positives = 147/320 (45%)
Query: 2 STETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLK 61
+TE L GH +T + +P + + S D L++W Y R
Sbjct: 4 ATEDPVLERYFKGHKAAITSLDLSPNGKQ-LATASWDTFLMLWNFKPHARAY-----RYV 57
Query: 62 GHSHFISDIVLSSDGNYALSGSWDKTLRLW-DLAAGKTTRRFEDHTKDVLSVAFSVDNRQ 120
GH ++ + S GN S S D+T+RLW GK + F+ HT V SV FS D +
Sbjct: 58 GHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSE-FKAHTAPVRSVDFSADGQF 116
Query: 121 IVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL 180
+ ++S DK+IK+W+ +F H+ WV C +FSP+ + +IVS D+ +K+W+
Sbjct: 117 LATASEDKSIKVWSMYRQ-RFLYSLYRHTHWVRCAKFSPDGR--LIVSCSEDKTIKIWDT 173
Query: 181 TNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHL-HTLVHNDIITA 239
TN + N S G+ N V +P G+ AS G D +WD+ K L H VH+ +
Sbjct: 174 TNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNC 233
Query: 240 LCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVS 299
+ F P+ ++ I TL+ +L+ G++ V +V+FS S
Sbjct: 234 ISFHPSGNYL-ITASSDGTLKILDLL-----EGRLIYTLQGHTGPVFTVSFSKGGELFAS 287
Query: 300 SSRDKTIKLWNTL---AHCK 316
D + LW T HCK
Sbjct: 288 GGADTQVLLWRTNFDELHCK 307
Score = 233 (87.1 bits), Expect = 4.7e-17, P = 4.7e-17
Identities = 60/206 (29%), Positives = 96/206 (46%)
Query: 32 ILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLW 91
+ + S D ++ +W + R Y L H+H++ S DG +S S DKT+++W
Sbjct: 117 LATASEDKSIKVWSMYRQRFLYS-----LYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW 171
Query: 92 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDW 151
D + F D V F+ I S+ D+T+K+W+ + K HS
Sbjct: 172 DTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVN-KLLQHYQVHSGG 230
Query: 152 VSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASG 211
V+C+ F P+ +++A D +K+ +L +L GHTG + TV+ S G L ASG
Sbjct: 231 VNCISFHPSGN--YLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASG 288
Query: 212 GKDMNAMLWDLN-DGKHLHTLVHNDI 236
G D +LW N D H L ++
Sbjct: 289 GADTQVLLWRTNFDELHCKGLTKRNL 314
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 298 (110.0 bits), Expect = 3.0e-31, Sum P(2) = 3.0e-31
Identities = 89/273 (32%), Positives = 137/273 (50%)
Query: 47 TRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAA-----GKTTRR 101
T T Y V + L H+ +S + SSDG S S DKT+R + + + +
Sbjct: 8 TASFTPY-VHSQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQE 66
Query: 102 FEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKF-TIVEDGHSDWVSCVRFSPN 160
F H + VAFS D R IVS+S DKT+KLW+ T++ GH+++ CV F+P
Sbjct: 67 FTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLI--GHTNYAFCVNFNP- 123
Query: 161 HQNPIIVSAGWDRMVKVWNLTNCK-LKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAML 219
Q+ +IVS +D V++W++T K LK+ + H+ + V + DGSL S D +
Sbjct: 124 -QSNMIVSGSFDETVRIWDVTTGKCLKVLPA-HSDPVTAVDFNRDGSLIVSSSYDGLCRI 181
Query: 220 WDLNDGKHLHTLV--HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETP 277
WD G + TL+ N ++ + FSPN F + + TL+ N+ K T
Sbjct: 182 WDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGT-LDNTLRLWNIS--SAKFLKTYTG 238
Query: 278 FFSLFRDVLSVAFSVDN-RQIVSSSRDKTIKLW 309
+ + +S AFSV N ++IVS S D + +W
Sbjct: 239 HVNA-QYCISSAFSVTNGKRIVSGSEDNCVHMW 270
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 84/302 (27%), Positives = 138/302 (45%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
TL HN V+ + + + S S D T+ + + + P + GH + ISD+
Sbjct: 19 TLTSHNRAVSSVKFSSD-GRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDV 77
Query: 71 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 130
SSD + +S S DKTL+LWD+ G + HT V F+ + IVS S D+T+
Sbjct: 78 AFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETV 137
Query: 131 KLWN-TLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL-TNCKLKIN 188
++W+ T C + HSD V+ V F N +IVS+ +D + ++W+ T +K
Sbjct: 138 RIWDVTTGKCLKVL--PAHSDPVTAVDF--NRDGSLIVSSSYDGLCRIWDSGTGHCVKTL 193
Query: 189 HSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCFSPNRSF 248
++ V SP+G G D LW+++ K L T + + C S S
Sbjct: 194 IDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGH-VNAQYCISSAFSV 252
Query: 249 QKIKLDISRTLQKSNLI-LYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIK 307
K +S + + N + ++ +N K+ V++VA I S S DKT++
Sbjct: 253 TNGKRIVSGS--EDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVR 310
Query: 308 LW 309
+W
Sbjct: 311 IW 312
Score = 237 (88.5 bits), Expect = 9.9e-20, P = 9.9e-20
Identities = 68/219 (31%), Positives = 102/219 (46%)
Query: 4 ETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGH 63
ET L TL GH + + NP+ + I+S S D T+ IW +T G K L H
Sbjct: 101 ETGSLIKTLIGHTNYAFCVNFNPQ-SNMIVSGSFDETVRIWDVTT-----GKCLKVLPAH 154
Query: 64 SHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF-EDHTKDVLSVAFSVDNRQIV 122
S ++ + + DG+ +S S+D R+WD G + +D V V FS + + I+
Sbjct: 155 SDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFIL 214
Query: 123 SSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQN-PIIVSAGWDRMVKVWNLT 181
+ D T++LWN ++ KF GH + C+ + + N IVS D V +W L
Sbjct: 215 VGTLDNTLRLWN-ISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELN 273
Query: 182 NCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLW 220
+ KL GHT + V P +L ASG D +W
Sbjct: 274 SKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
Score = 210 (79.0 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 69/219 (31%), Positives = 109/219 (49%)
Query: 105 HTKDVLSVAFSVDNRQIVSSSRDKTIKLW--NTLAHCKFTIVED--GHSDWVSCVRFSPN 160
H + V SV FS D R + S+S DKTI+ + NT+ V++ GH + +S V FS +
Sbjct: 23 HNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSD 82
Query: 161 HQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLW 220
+ IVSA D+ +K+W++ L GHT Y V +P ++ SG D +W
Sbjct: 83 AR--FIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIW 140
Query: 221 DLNDGKHLHTL-VHNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGK-METPF 278
D+ GK L L H+D +TA+ F+ + S L +S + I + G ++T
Sbjct: 141 DVTTGKCLKVLPAHSDPVTAVDFNRDGS-----LIVSSSYDGLCRI-WDSGTGHCVKTLI 194
Query: 279 FSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKF 317
V V FS + + I+ + D T++LWN ++ KF
Sbjct: 195 DDENPPVSFVRFSPNGKFILVGTLDNTLRLWN-ISSAKF 232
Score = 139 (54.0 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 45/183 (24%), Positives = 84/183 (45%)
Query: 148 HSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKI-----NHSGHTGYLNTVTVS 202
H+ VS V+FS + + ++ SA D+ ++ + + I +GH ++ V S
Sbjct: 23 HNRAVSSVKFSSDGR--LLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFS 80
Query: 203 PDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQK 261
D S D LWD+ G + TL+ H + + F+P + + +S + +
Sbjct: 81 SDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSN-----MIVSGSFDE 135
Query: 262 SNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNT-LAHCKFTIV 320
+ + ++ + GK + V +V F+ D IVSSS D ++W++ HC T++
Sbjct: 136 T-VRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLI 194
Query: 321 DLE 323
D E
Sbjct: 195 DDE 197
Score = 63 (27.2 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 11/32 (34%), Positives = 21/32 (65%)
Query: 343 DPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVS 374
+PP+ + +S +G+ + G DNT+R+W +S
Sbjct: 198 NPPVSF-VRFSPNGKFILVGTLDNTLRLWNIS 228
Score = 61 (26.5 bits), Expect = 3.0e-31, Sum P(2) = 3.0e-31
Identities = 10/29 (34%), Positives = 21/29 (72%)
Query: 347 CLSLAWS-TDGQTLFAGYSDNTIRVWQVS 374
C+S A+S T+G+ + +G DN + +W+++
Sbjct: 245 CISSAFSVTNGKRIVSGSEDNCVHMWELN 273
Score = 40 (19.1 bits), Expect = 4.7e-29, Sum P(2) = 4.7e-29
Identities = 9/42 (21%), Positives = 18/42 (42%)
Query: 330 ELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVW 371
EL + Q + +++A + +G D T+R+W
Sbjct: 271 ELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
Identities = 94/320 (29%), Positives = 147/320 (45%)
Query: 2 STETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLK 61
+TE L GH +T + +P + + S D L++W Y R
Sbjct: 4 ATEDPVLERYFKGHKAAITSLDLSPNGKQ-LATASWDTFLMLWNFKPHARAY-----RYV 57
Query: 62 GHSHFISDIVLSSDGNYALSGSWDKTLRLW-DLAAGKTTRRFEDHTKDVLSVAFSVDNRQ 120
GH ++ + S GN S S D+T+RLW GK + F+ HT V SV FS D +
Sbjct: 58 GHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSE-FKAHTAPVRSVDFSADGQF 116
Query: 121 IVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL 180
+ ++S DK+IK+W+ +F H+ WV C +FSP+ + +IVS D+ +K+W+
Sbjct: 117 LATASEDKSIKVWSMYRQ-RFLYSLYRHTHWVRCAKFSPDGR--LIVSCSEDKTIKIWDT 173
Query: 181 TNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHL-HTLVHNDIITA 239
TN + N S G+ N V +P G+ AS G D +WD+ K L H VH+ +
Sbjct: 174 TNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNC 233
Query: 240 LCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVS 299
+ F P+ ++ + TL+ +L+ G++ V +V+FS S
Sbjct: 234 ISFHPSDNYL-VTASSDGTLKILDLL-----EGRLIYTLQGHTGPVFTVSFSKGGELFAS 287
Query: 300 SSRDKTIKLWNTL---AHCK 316
D + LW T HCK
Sbjct: 288 GGADTQVLLWRTNFDELHCK 307
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 109/355 (30%), Positives = 168/355 (47%)
Query: 2 STETLQLRGTLNGHNGWVTQI--ATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKR 59
S E L GH VT + + N K + S S D+TL+IW + Y R
Sbjct: 5 SQEDPSLERHFKGHRDAVTCVDFSLNTKH---LASGSMDSTLMIWHMKPQSRAY-----R 56
Query: 60 LKGHSHFISDIVLSSDGNYALSGSWDKTLRLW-DLAAGKTTRRFEDHTKDVLSVAFSVDN 118
GH ++ + S G+ SGS DKT+R+W G++T F HT V SV F D
Sbjct: 57 FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTV-FRAHTATVRSVHFCSDG 115
Query: 119 RQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVW 178
+ +V++S DKT+K+W+T +F H +WV C +FSP+ + +IVSA D+ VK+W
Sbjct: 116 QSLVTASDDKTVKVWSTHRQ-RFLFSLTQHINWVRCAKFSPDGR--LIVSASDDKTVKLW 172
Query: 179 NLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHL-HTLVHNDII 237
+ T+ + ++ H G++ V P G+ A+ G D +WD + L H +H+ +
Sbjct: 173 DKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAV 232
Query: 238 TALCFSPNRSFQKIKLDISRTLQKSNL----ILYPINHGKMETPFFSLFRDVLSVAFSVD 293
AL F P+ ++ I TL+ +L +LY + HG + P +VAFS
Sbjct: 233 NALSFHPSGNYL-ITASSDSTLKILDLMEGRLLYTL-HGH-QGP-------ATTVAFSRT 282
Query: 294 NRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADPPMCL 348
S D+ + +W + F IVD K RP ++ S+ P M L
Sbjct: 283 GEYFASGGSDEQVMVWKS----NFDIVDYGDMKA---RRPPPLTSSSGTLPKMDL 330
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 94/328 (28%), Positives = 154/328 (46%)
Query: 14 GHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLS 73
GH +T + +P + + S D L++W + R GH ++ + S
Sbjct: 16 GHKAAITSVDFSPSGKQ-LATASWDTFLMLWNCKPQARAF-----RYVGHKDVVTSVQFS 69
Query: 74 SDGNYALSGSWDKTLRLW-DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKL 132
GN S S D+T+RLW GK++ F+ HT V SV FS D + + ++S DK+IK+
Sbjct: 70 PLGNLLASASRDRTVRLWIPDKRGKSSE-FKAHTAPVRSVDFSADGQFLATASEDKSIKV 128
Query: 133 WNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGH 192
WN +F H+ WV C +FSP+ + +IVS D+ +K+W+ TN + N S
Sbjct: 129 WNMYRQ-RFLYSLYRHTHWVRCAKFSPDGR--LIVSCSEDKTIKIWDTTNKQCVNNFSDS 185
Query: 193 TGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHL-HTLVHNDIITALCFSPNRSFQKI 251
G+ N V +P+G+ AS G D +WD+ K L H VH+ + + F P+ ++ I
Sbjct: 186 VGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYI-I 244
Query: 252 KLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNT 311
TL+ +L+ G++ V +V+FS S D + LW T
Sbjct: 245 TASSDGTLKILDLL-----EGRLIYTLQGHTGPVFTVSFSKGGELFSSGGADTQVLLWRT 299
Query: 312 ---LAHCKFTIVDLETKKMVEELRPDVV 336
+CK ++ K++ + P +V
Sbjct: 300 NFDYLNCK-DMIKRNLKRLHFDSSPHLV 326
Score = 214 (80.4 bits), Expect = 7.7e-15, P = 7.7e-15
Identities = 66/259 (25%), Positives = 114/259 (44%)
Query: 55 VPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 114
V ++ KGH I+ + S G + SWD L LW+ R+ H V SV F
Sbjct: 9 VLERYFKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQF 68
Query: 115 SVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRM 174
S + S+SRD+T++LW K + + H+ V V FS + Q + +A D+
Sbjct: 69 SPLGNLLASASRDRTVRLWIPDKRGKSSEFK-AHTAPVRSVDFSADGQ--FLATASEDKS 125
Query: 175 VKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHN 234
+KVWN+ + + HT ++ SPDG L S +D +WD + + ++ +
Sbjct: 126 IKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDS 185
Query: 235 -DIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVD 293
+ F+PN + I+ + ++ I K+ + V V+F
Sbjct: 186 VGFANFVDFNPNGTC------IASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPS 239
Query: 294 NRQIVSSSRDKTIKLWNTL 312
I+++S D T+K+ + L
Sbjct: 240 GNYIITASSDGTLKILDLL 258
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 104/350 (29%), Positives = 163/350 (46%)
Query: 4 ETLQLRGTLNGHNGWVTQI--ATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLK 61
E L GH VT + + N K + S S D+ L++W + Y R
Sbjct: 7 EDPSLERHFKGHRDAVTSVDFSLNTK---QLASGSMDSCLMVWHMKPQTRAY-----RFA 58
Query: 62 GHSHFISDIVLSSDGNYALSGSWDKTLRLW-DLAAGKTTRRFEDHTKDVLSVAFSVDNRQ 120
GH ++ + S G+ SGS DKT+R+W G++T F HT V SV F D +
Sbjct: 59 GHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTV-FRAHTATVRSVHFCSDGQS 117
Query: 121 IVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL 180
V++S DKT+K+W+T KF H +WV C +FSP+ + +IVSA D+ VK+W+
Sbjct: 118 FVTASDDKTVKVWSTHRQ-KFLFSLSQHINWVRCAKFSPDGR--LIVSASDDKTVKLWDK 174
Query: 181 TNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHL-HTLVHNDIITA 239
T+ + ++ H G++ V P G+ A+ G D +WD+ + L H +H+ + A
Sbjct: 175 TSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNA 234
Query: 240 LCFSPNRSFQKIKLDISRTLQKSNL----ILYPINHGKMETPFFSLFRDVLSVAFSVDNR 295
L F P+ ++ + TL+ +L +LY + HG + P +VAFS
Sbjct: 235 LSFHPSGNYL-VTASSDSTLKILDLMEGRLLYTL-HGH-QGP-------ATTVAFSRTGE 284
Query: 296 QIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADPP 345
S D+ + +W + F IVD V+ RP S+ P
Sbjct: 285 YFASGGSDEQVMVWKS----NFDIVDYGEVLRVQ--RPPATRASSSGTLP 328
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 309 (113.8 bits), Expect = 2.7e-30, Sum P(2) = 2.7e-30
Identities = 90/313 (28%), Positives = 147/313 (46%)
Query: 1 MSTETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRL 60
M TL+ GH ++ NP + + S D +L+IW L + R
Sbjct: 5 MEDPTLERH--FKGHKDVISCADFNPNNKQ-LATGSCDKSLMIWNLAPKARAF-----RF 56
Query: 61 KGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ 120
GH+ I+ + + G+ S S D+T+RLW + + F+ HT V SV FS D ++
Sbjct: 57 VGHTDVITGVNFAPSGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQR 116
Query: 121 IVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL 180
+V++S DK++K+W + KF + H++WV C RFSP+ + +I S G DR V++W+
Sbjct: 117 LVTASDDKSVKVWG-VERKKFLYSLNRHTNWVRCARFSPDGR--LIASCGDDRTVRLWD- 172
Query: 181 TNCKLKIN-HSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHL-HTLVHNDIIT 238
T+ IN + + G V + G+ AS G D +WD+ K + H VHN +
Sbjct: 173 TSSHQCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVN 232
Query: 239 ALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIV 298
F P+ ++ IS + S + + + G++ VL+V FS D
Sbjct: 233 CFSFHPSGNYL-----ISGS-SDSTIKILDLLEGRLIYTLHGHKGPVLTVTFSRDGDLFA 286
Query: 299 SSSRDKTIKLWNT 311
S D + +W T
Sbjct: 287 SGGADSQVLMWKT 299
Score = 251 (93.4 bits), Expect = 1.9e-20, Sum P(2) = 1.9e-20
Identities = 71/256 (27%), Positives = 117/256 (45%)
Query: 57 QKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 116
++ KGH IS + + +GS DK+L +W+LA RF HT + V F+
Sbjct: 11 ERHFKGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAP 70
Query: 117 DNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVK 176
+ SSSRD+T++LW + T+ + H+ V V FS + Q +V+A D+ VK
Sbjct: 71 SGSLVASSSRDQTVRLWTPSIKGESTVFK-AHTASVRSVHFSRDGQR--LVTASDDKSVK 127
Query: 177 VWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDI 236
VW + K + + HT ++ SPDG L AS G D LWD + + ++ + D
Sbjct: 128 VWGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCIN--IFTDY 185
Query: 237 ITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQ 296
+ F F I+ + + + ++ I K+ + V +F
Sbjct: 186 GGSATFV---DFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNY 242
Query: 297 IVSSSRDKTIKLWNTL 312
++S S D TIK+ + L
Sbjct: 243 LISGSSDSTIKILDLL 258
Score = 219 (82.2 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 61/210 (29%), Positives = 98/210 (46%)
Query: 32 ILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLW 91
+++ S D ++ +W + R Y L H++++ S DG S D+T+RLW
Sbjct: 117 LVTASDDKSVKVWGVERKKFLYS-----LNRHTNWVRCARFSPDGRLIASCGDDRTVRLW 171
Query: 92 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDW 151
D ++ + F D+ V F+ I SS D TIK+W+ + K H+
Sbjct: 172 DTSSHQCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTN-KLIQHYKVHNAG 230
Query: 152 VSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASG 211
V+C F P+ ++S D +K+ +L +L GH G + TVT S DG L ASG
Sbjct: 231 VNCFSFHPSGN--YLISGSSDSTIKILDLLEGRLIYTLHGHKGPVLTVTFSRDGDLFASG 288
Query: 212 GKDMNAMLWDLN-DGKHLHTLV--HNDIIT 238
G D ++W N D + L+ H+ +T
Sbjct: 289 GADSQVLMWKTNFDSLNYRELLSKHSKRVT 318
Score = 179 (68.1 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 50/172 (29%), Positives = 82/172 (47%)
Query: 147 GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGS 206
GH D +SC F+PN++ + + D+ + +WNL GHT + V +P GS
Sbjct: 16 GHKDVISCADFNPNNKQ--LATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAPSGS 73
Query: 207 LCASGGKDMNAMLWDLN-DGKHLHTLVHNDIITALCFSPNRSFQKIKLDISRTLQKSNLI 265
L AS +D LW + G+ H + ++ FS R Q++ ++ + KS +
Sbjct: 74 LVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFS--RDGQRL---VTASDDKS-VK 127
Query: 266 LYPINHGKMETPFFSLFRD---VLSVAFSVDNRQIVSSSRDKTIKLWNTLAH 314
++ + K +SL R V FS D R I S D+T++LW+T +H
Sbjct: 128 VWGVERKKF---LYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSH 176
Score = 47 (21.6 bits), Expect = 2.7e-30, Sum P(2) = 2.7e-30
Identities = 8/30 (26%), Positives = 18/30 (60%)
Query: 348 LSLAWSTDGQTLFAGYSDNTIRVWQVSVTS 377
L++ +S DG +G +D+ + +W+ + S
Sbjct: 274 LTVTFSRDGDLFASGGADSQVLMWKTNFDS 303
Score = 46 (21.3 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 6/22 (27%), Positives = 15/22 (68%)
Query: 352 WSTDGQTLFAGYSDNTIRVWQV 373
+++ G + + +DNTI++W +
Sbjct: 194 FNSSGTCIASSGADNTIKIWDI 215
Score = 39 (18.8 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 347 CLSLAWSTDGQTLFAGYSDNTIRV 370
C S + G L +G SD+TI++
Sbjct: 233 CFS--FHPSGNYLISGSSDSTIKI 254
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 96/334 (28%), Positives = 158/334 (47%)
Query: 4 ETLQLRGTLNGHNGWVTQI--ATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLK 61
E L GH +T + + N K + S S D+ L++W + Y R
Sbjct: 7 EDPSLERHFKGHRDAITSVDFSLNTK---QLASGSMDSCLMVWHMKPQSRAY-----RFA 58
Query: 62 GHSHFISDIVLSSDGNYALSGSWDKTLRLW-DLAAGKTTRRFEDHTKDVLSVAFSVDNRQ 120
GH ++ + S G+ SGS DKT+R+W G++T F HT V SV F D +
Sbjct: 59 GHKDAVTCVNFSPSGHLLASGSRDKTVRIWIPNVKGESTV-FRAHTATVRSVHFCSDGQS 117
Query: 121 IVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL 180
+V++S DKT+K+W+T KF H +WV C RFSP+ + +IVSA D+ VK+W+
Sbjct: 118 LVTASDDKTVKVWSTHRQ-KFLFSLSQHINWVRCARFSPDGR--LIVSASDDKTVKLWDK 174
Query: 181 TNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHL-HTLVHNDIITA 239
T+ + ++ H G++ V P G+ A+ D +WD+ + L H +H+ + A
Sbjct: 175 TSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNA 234
Query: 240 LCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVS 299
L F P+ ++ L S S L + + G++ +VAFS S
Sbjct: 235 LSFHPSGNYL---LTAS---SDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFAS 288
Query: 300 SSRDKTIKLWNTLAHCKFTIVDLETKKMVEELRP 333
D+ + +W + F +VD +++++ RP
Sbjct: 289 GGSDEQVMVWKS----NFDVVDY--REVIKVHRP 316
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 335 (123.0 bits), Expect = 8.6e-30, P = 8.6e-30
Identities = 91/295 (30%), Positives = 142/295 (48%)
Query: 44 WKLTRDDT-NYGVP-QKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR 101
W T+ D N+ P + L+GH + + S D S S D+T+++WD G
Sbjct: 274 WIETKPDVANHWSPCLQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHT 333
Query: 102 FEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNT-LAHCKFTIVEDGHSDWVSCVRFSPN 160
E H+ V SV FS D+R + S+S D T+K+W+T + T+ +GH DWV V FS
Sbjct: 334 LEGHSDLVRSVIFSHDSRLLASAS-DSTVKIWDTGTGSLQHTL--EGHRDWVRSVIFS-- 388
Query: 161 HQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLW 220
H + ++ SA D VK+W+ L+ GH ++ +V S D L AS D +W
Sbjct: 389 HDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIW 448
Query: 221 DLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFF 279
D G HTL H D + ++ FS + D RT++ ++ G +
Sbjct: 449 DTGTGSLQHTLEGHRDWVRSVIFSHDSRLLASASD-DRTVR-----IWDTEKGSHKHTLE 502
Query: 280 SLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELRPD 334
V SV+FS D+R + S+S D+T+++W+ A DL+ +E +R D
Sbjct: 503 GHSSLVTSVSFSHDSRLLASASNDQTVRIWDIEARSLQHTFDLDAT--IEAMRFD 555
Score = 326 (119.8 bits), Expect = 8.5e-29, P = 8.5e-29
Identities = 80/261 (30%), Positives = 128/261 (49%)
Query: 3 TETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKG 62
TET L+ TL GH+ V + + +L+ + D+T+ IW DT G Q L+G
Sbjct: 325 TETGSLQHTLEGHSDLVRSVIFS--HDSRLLASASDSTVKIW-----DTGTGSLQHTLEG 377
Query: 63 HSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 122
H ++ ++ S D S S D T+++WD G E H V SV FS D++ +
Sbjct: 378 HRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLA 437
Query: 123 SSSRDKTIKLWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT 181
S+S D T+K+W+T + T+ +GH DWV V FS H + ++ SA DR V++W+
Sbjct: 438 SASDDSTVKIWDTGTGSLQHTL--EGHRDWVRSVIFS--HDSRLLASASDDRTVRIWDTE 493
Query: 182 NCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALC 241
K GH+ + +V+ S D L AS D +WD+ HT + I A+
Sbjct: 494 KGSHKHTLEGHSSLVTSVSFSHDSRLLASASNDQTVRIWDIEARSLQHTFDLDATIEAMR 553
Query: 242 FSPNRSFQKIKLDISRTLQKS 262
F S I++ + +++ +
Sbjct: 554 FDKATSLW-IQVTVKASIRSA 573
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 101/348 (29%), Positives = 161/348 (46%)
Query: 4 ETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGH 63
E L GH VT + + + S S D+ L++W + Y R GH
Sbjct: 38 EDPSLERHFKGHRDAVTCVDFSFNMKQ-LASGSMDSCLMVWHMKPQSRAY-----RFTGH 91
Query: 64 SHFISDIVLSSDGNYALSGSWDKTLRLW-DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 122
++ + S G+ SGS DKT+R+W G++T F HT V SV F D + V
Sbjct: 92 KDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTV-FRAHTATVRSVHFCSDGQSFV 150
Query: 123 SSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTN 182
++S DKTIK+W+T KF H +WV C +FSP+ + +IVSA D+ VK+W+ T+
Sbjct: 151 TASDDKTIKVWSTHRQ-KFLFSLSQHINWVRCAKFSPDGR--LIVSASDDKTVKLWDKTS 207
Query: 183 CKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHL-HTLVHNDIITALC 241
+ ++ H G++ V P G+ A+ G D +WD+ + L H +H+ + AL
Sbjct: 208 RECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALS 267
Query: 242 FSPNRSFQKIKLDISRTLQKSNL----ILYPINHGKMETPFFSLFRDVLSVAFSVDNRQI 297
F P+ ++ + TL+ +L +LY + HG + P +VAFS
Sbjct: 268 FHPSGNYL-VTASSDSTLKILDLMEGRLLYTL-HGH-QGP-------ATTVAFSRTGEYF 317
Query: 298 VSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADPP 345
S D+ + +W + F ++D V+ RP S+ P
Sbjct: 318 ASGGSDEQVMVWKS----NFDVIDYGEVLRVQ--RPPATLASSSGTLP 359
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 266 (98.7 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 65/196 (33%), Positives = 96/196 (48%)
Query: 12 LNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV 71
L+GH VT++ +P F ++S S D T+ +W D G ++ LKGH+ + DI
Sbjct: 39 LSGHRSPVTRVIFHPVF-SVMVSASEDATIKVW-----DYETGDFERTLKGHTDSVQDIS 92
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
G S S D T++LWD + R H +V SVA + IVS+SRDKTIK
Sbjct: 93 FDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 152
Query: 132 LWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS 190
+W +C T GH +WV VR PN +I S D+ V+VW + + K
Sbjct: 153 MWEVQTGYCVKTFT--GHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKECKAELR 208
Query: 191 GHTGYLNTVTVSPDGS 206
H + ++ +P+ S
Sbjct: 209 EHEHVVECISWAPESS 224
Score = 220 (82.5 bits), Expect = 4.0e-16, P = 4.0e-16
Identities = 69/272 (25%), Positives = 118/272 (43%)
Query: 56 PQK-RLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 114
P+K L GH ++ ++ + +S S D T+++WD G R + HT V ++F
Sbjct: 34 PEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF 93
Query: 115 SVDNRQIVSSSRDKTIKLWNTLA-HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDR 173
+ + S S D TIKLW+ C T+ GH VS V PN + IVSA D+
Sbjct: 94 DHSGKLLASCSADMTIKLWDFQGFECIRTM--HGHDHNVSSVAIMPNGDH--IVSASRDK 149
Query: 174 MVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTL-V 232
+K+W + +GH ++ V + DG+L AS D +W + + L
Sbjct: 150 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 209
Query: 233 HNDIITALCFSPNRSFQKIKLDISRTLQKSN-----LI---------LYPINHGKMETPF 278
H ++ + ++P S+ I +KS L+ ++ ++ G
Sbjct: 210 HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL 269
Query: 279 FSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWN 310
V V F + I+S + DKT+++W+
Sbjct: 270 VGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 301
Score = 164 (62.8 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 52/185 (28%), Positives = 83/185 (44%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKL-TRD------DTNYGV------PQ 57
T GH WV + N I SCS D T+ +W + T++ + + V P+
Sbjct: 164 TFTGHREWVRMVRPNQD-GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 222
Query: 58 KRLKGHSHFISDIVLSSD--GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 115
S S G + LSGS DKT+++WD++ G H V V F
Sbjct: 223 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH 282
Query: 116 VDNRQIVSSSRDKTIKLWNTL-AHCKFTIVEDGHSDWVSCVRFSPNHQN-PIIVSAGWDR 173
+ I+S + DKT+++W+ C T+ + H +V+ + F H+ P +V+ D+
Sbjct: 283 SGGKFILSCADDKTLRVWDYKNKRCMKTL--NAHEHFVTSLDF---HKTAPYVVTGSVDQ 337
Query: 174 MVKVW 178
VKVW
Sbjct: 338 TVKVW 342
Score = 154 (59.3 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 57/230 (24%), Positives = 96/230 (41%)
Query: 147 GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGS 206
GH V+ V F P ++VSA D +KVW+ + GHT + ++ G
Sbjct: 41 GHRSPVTRVIFHPVFS--VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 98
Query: 207 LCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLI 265
L AS DM LWD + + T+ H+ ++++ PN +S + K+ +
Sbjct: 99 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI-----VSASRDKT-IK 152
Query: 266 LYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA-HCKFTIVDLET 324
++ + G F V V + D I S S D+T+++W CK + + E
Sbjct: 153 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 212
Query: 325 KKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVS 374
P+ S S+ ++ + G L +G D TI++W VS
Sbjct: 213 VVECISWAPES-SYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 261
Score = 125 (49.1 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 28/102 (27%), Positives = 50/102 (49%)
Query: 121 IVSSSRDKTIKLWN-TLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
++S SRDKTIK+W+ + C T+V GH +WV V F + I+S D+ ++VW+
Sbjct: 246 LLSGSRDKTIKMWDVSTGMCLMTLV--GHDNWVRGVLFHSGGK--FILSCADDKTLRVWD 301
Query: 180 LTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWD 221
N + + H ++ ++ +G D +W+
Sbjct: 302 YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 343
Score = 120 (47.3 bits), Expect = 0.00017, P = 0.00017
Identities = 29/84 (34%), Positives = 44/84 (52%)
Query: 11 TLNGHNGWVTQIA--TNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFIS 68
TL GH+ WV + + KF ILSC+ D TL +W D N K L H HF++
Sbjct: 268 TLVGHDNWVRGVLFHSGGKF---ILSCADDKTLRVW----DYKNKRC-MKTLNAHEHFVT 319
Query: 69 DIVLSSDGNYALSGSWDKTLRLWD 92
+ Y ++GS D+T+++W+
Sbjct: 320 SLDFHKTAPYVVTGSVDQTVKVWE 343
Score = 76 (31.8 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 30/106 (28%), Positives = 49/106 (46%)
Query: 205 GSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSN 263
G SG +D +WD++ G L TLV H++ + + F F D +TL+ +
Sbjct: 243 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD-DKTLRVWD 301
Query: 264 LILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLW 309
Y N M+T + V S+ F +V+ S D+T+K+W
Sbjct: 302 ---YK-NKRCMKT-LNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 342
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 83/263 (31%), Positives = 127/263 (48%)
Query: 59 RLKGHSHFISDIVLSSDGNYALSGSWDKTLRLW-DLAAGKTTRRFEDHTKDVLSVAFSVD 117
R GH ++ + S GN S S D+T+RLW GK + F+ HT V SV FS D
Sbjct: 13 RYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSE-FKAHTAPVRSVDFSAD 71
Query: 118 NRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKV 177
+ + ++S DK+IK+W+ +F H+ WV C +FSP+ + +IVS D+ +K+
Sbjct: 72 GQFLATASEDKSIKVWSMYRQ-RFLYSLYRHTHWVRCAKFSPDGR--LIVSCSEDKTIKI 128
Query: 178 WNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHL-HTLVHNDI 236
W+ TN + N S G+ N V +P G+ AS G D +WD+ K L H VH+
Sbjct: 129 WDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGG 188
Query: 237 ITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQ 296
+ + F P+ ++ I TL+ +L+ G++ V +V+FS
Sbjct: 189 VNCISFHPSGNYL-ITASSDGTLKILDLL-----EGRLIYTLQGHTGPVFTVSFSKGGEL 242
Query: 297 IVSSSRDKTIKLWNTL---AHCK 316
S D + LW T HCK
Sbjct: 243 FASGGADTQVLLWRTNFDELHCK 265
Score = 251 (93.4 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 71/238 (29%), Positives = 116/238 (48%)
Query: 14 GHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKR-----LKGHSHFIS 68
GH VT + +P + + S SRD T+ +W +P KR K H+ +
Sbjct: 16 GHKDVVTSVQFSPH-GNLLASASRDRTVRLW----------IPDKRGKFSEFKAHTAPVR 64
Query: 69 DIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDK 128
+ S+DG + + S DK++++W + + HT V FS D R IVS S DK
Sbjct: 65 SVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDK 124
Query: 129 TIKLWNTL-AHCKFTIVED-GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLK 186
TIK+W+T C + G +++V F+P+ I SAG D+ VKVW++ KL
Sbjct: 125 TIKIWDTTNKQCVNNFSDSVGFANFVD---FNPS--GTCIASAGSDQTVKVWDVRVNKLL 179
Query: 187 INHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFS 243
++ H+G +N ++ P G+ + D + DL +G+ ++TL H + + FS
Sbjct: 180 QHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFS 237
Score = 167 (63.8 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 52/223 (23%), Positives = 98/223 (43%)
Query: 90 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHS 149
LW+ R+ H V SV FS + S+SRD+T++LW KF+ + H+
Sbjct: 2 LWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFK-AHT 60
Query: 150 DWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCA 209
V V FS + Q + +A D+ +KVW++ + + HT ++ SPDG L
Sbjct: 61 APVRSVDFSADGQ--FLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIV 118
Query: 210 SGGKDMNAMLWDLNDGKHLHTLVHNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPI 269
S +D +WD + + + N+ ++ F+ F I+ + ++ +
Sbjct: 119 SCSEDKTIKIWDTTNKQCV-----NNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDV 173
Query: 270 NHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTL 312
K+ + V ++F ++++S D T+K+ + L
Sbjct: 174 RVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLL 216
Score = 150 (57.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 45/173 (26%), Positives = 77/173 (44%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
+L H WV +P I+SCS D T+ IW T G ++F+
Sbjct: 97 SLYRHTHWVRCAKFSPD-GRLIVSCSEDKTIKIWDTTNKQCVNNFSDS--VGFANFVD-- 151
Query: 71 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 130
+ G S D+T+++WD+ K + ++ H+ V ++F ++++S D T+
Sbjct: 152 -FNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTL 210
Query: 131 KLWNTL-AHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTN 182
K+ + L +T+ GH+ V V FS + + S G D V +W TN
Sbjct: 211 KILDLLEGRLIYTL--QGHTGPVFTVSFSKGGE--LFASGGADTQVLLWR-TN 258
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 88/290 (30%), Positives = 141/290 (48%)
Query: 38 DNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLW-DLAAG 96
D+ L++W + Y R GH ++ + S G+ SGS DKT+R+W G
Sbjct: 2 DSCLMVWHMKPQSRAY-----RFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKG 56
Query: 97 KTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVR 156
++T F HT V SV F D + V++S DKT+K+W T KF H +WV C +
Sbjct: 57 ESTV-FRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQ-KFLFSLSQHINWVRCAK 114
Query: 157 FSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMN 216
FSP+ + +IVSA D+ VK+W+ ++ + ++ H G++ V P G+ A+ G D
Sbjct: 115 FSPDGR--LIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNT 172
Query: 217 AMLWDLNDGKHL-HTLVHNDIITALCFSPNRSFQKIKLDISRTLQKSNL----ILYPINH 271
+WD+ + L H +H+ + L F P+ ++ I TL+ +L +LY + H
Sbjct: 173 VKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYL-ITASSDSTLKILDLMEGRLLYTL-H 230
Query: 272 GKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVD 321
G + P +VAFS S D+ + +W + F IVD
Sbjct: 231 GH-QGP-------ATTVAFSRTGEYFASGGSDEQVMVWKS----NFDIVD 268
Score = 250 (93.1 bits), Expect = 8.8e-20, P = 8.8e-20
Identities = 77/264 (29%), Positives = 121/264 (45%)
Query: 14 GHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLS 73
GH VT + +P + S SRD T+ IW N + H+ + +
Sbjct: 21 GHKDAVTCVNFSPS-GHLLASGSRDKTVRIWV-----PNVKGESTVFRAHTATVRSVHFC 74
Query: 74 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLW 133
SDG ++ S DKT+++W K H V FS D R IVS+S DKT+KLW
Sbjct: 75 SDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLW 134
Query: 134 NTLAH-CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGH 192
+ + C + E H +V+ V F P+ I +AG D VKVW++ +L ++ H
Sbjct: 135 DKSSRECVHSYCE--HGGFVTYVDFHPS--GTCIAAAGMDNTVKVWDVRTHRLLQHYQLH 190
Query: 193 TGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFS-PNRSFQK 250
+ +N ++ P G+ + D + DL +G+ L+TL H T + FS F
Sbjct: 191 SAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFAS 250
Query: 251 IKLDISRTLQKSNLILYPINHGKM 274
D + KSN + ++HG++
Sbjct: 251 GGSDEQVMVWKSNFDI--VDHGEV 272
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 82/261 (31%), Positives = 131/261 (50%)
Query: 58 KRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 117
K L+GH+ IS + S+DGN S S DKT+ LW R+E H+ + +A+S D
Sbjct: 37 KTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSD 96
Query: 118 NRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKV 177
+ S+S D T+++W+ + + V GH+++V CV F+P + +IVS +D +++
Sbjct: 97 SHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNP--PSNLIVSGSFDETIRI 154
Query: 178 WNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHND-- 235
W + K H+ +++V + DGSL S D + +WD +G L TL+ +
Sbjct: 155 WEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSP 214
Query: 236 IITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSV--AFSVD 293
++ FSPN F + + TL+ SN Y GK + V + AFSV
Sbjct: 215 AVSFAKFSPNGKFILVAT-LDSTLKLSN---YAT--GKFLKVYTGHTNKVFCITSAFSVT 268
Query: 294 N-RQIVSSSRDKTIKLWNTLA 313
N + IVS S D + LW+ A
Sbjct: 269 NGKYIVSGSEDNCVYLWDLQA 289
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 76/235 (32%), Positives = 121/235 (51%)
Query: 14 GHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLS 73
GH+ ++ +A + T S S D TL IW + Y K L+GH++F+ + +
Sbjct: 83 GHSSGISDLAWSSDSHYTC-SASDDCTLRIWDAR---SPYEC-LKVLRGHTNFVFCVNFN 137
Query: 74 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLW 133
N +SGS+D+T+R+W++ GK R + H+ + SV F+ D IVS+S D + K+W
Sbjct: 138 PPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIW 197
Query: 134 NTL-AHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCK-LKINHSG 191
+ C T+++D S VS +FSPN + I+ A D +K+ N K LK+ ++G
Sbjct: 198 DAKEGTCLKTLIDD-KSPAVSFAKFSPNGK--FILVATLDSTLKLSNYATGKFLKV-YTG 253
Query: 192 HTGYLNTVTVS---PDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HND-IITALC 241
HT + +T + +G SG +D LWDL L L H D +I+ C
Sbjct: 254 HTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSC 308
Score = 199 (75.1 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 63/213 (29%), Positives = 101/213 (47%)
Query: 12 LNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV 71
L GH +V + NP + I+S S D T+ IW++ G + +K HS IS +
Sbjct: 124 LRGHTNFVFCVNFNPP-SNLIVSGSFDETIRIWEVKT-----GKCVRMIKAHSMPISSVH 177
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA-FSVDNRQIVSSSRDKTI 130
+ DG+ +S S D + ++WD G + D +S A FS + + I+ ++ D T+
Sbjct: 178 FNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTL 237
Query: 131 KLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQN-PIIVSAGWDRMVKVWNLTNCKLKINH 189
KL N A KF V GH++ V C+ + + N IVS D V +W+L +
Sbjct: 238 KLSN-YATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRL 296
Query: 190 SGHTGYLNTVTVSP-DGSLCASGGK-DMNAMLW 220
GHT + +V+ P + +SG D +W
Sbjct: 297 EGHTDAVISVSCHPVQNEISSSGNHLDKTIRIW 329
>UNIPROTKB|G4NFU5 [details] [associations]
symbol:MGG_08708 "WD repeat-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001236 PRINTS:PR00319
KO:K14855 RefSeq:XP_003719269.1 ProteinModelPortal:G4NFU5
EnsemblFungi:MGG_08708T0 GeneID:2678953 KEGG:mgr:MGG_08708
Uniprot:G4NFU5
Length = 526
Score = 222 (83.2 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 89/323 (27%), Positives = 141/323 (43%)
Query: 4 ETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGH 63
ET + TL GH GWV ++ +P + +CS D T+ IW +T V + LKGH
Sbjct: 183 ETGTPKHTLKGHAGWVLGVSWSPD-GTRLATCSMDKTVRIWD---PETGKQVGSE-LKGH 237
Query: 64 SHFISDIV-----LSSDGNYAL-SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 117
+ ++ I L DG L S S D T R+W + G+T H V V +
Sbjct: 238 AKWVQGIAWEPLHLWRDGTPRLVSASKDFTARIWTVNTGRTEHVLSGHKGSVSCVRWGAG 297
Query: 118 NRQ--IVSSSRDKTIKLWNTLAHCKFTIVED--GHSDWVSCVRFSPNHQNPIIVSAGWDR 173
N + ++S DKT+K+W+ + K T++ D H+ WV+ + S + + G+
Sbjct: 298 NGTGVVYTASHDKTVKVWDAV---KGTLLHDLKSHAHWVNHLALSTD----FVCRTGFFD 350
Query: 174 MVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLC---ASGGKDMNAMLWD-LNDG-KHL 228
K T + K + Y V G + S D L+D LNDG K +
Sbjct: 351 HTKTVPAT-AEEKTAKAKER-YEKAARVG--GKIVERLVSASDDFTMYLFDPLNDGTKPI 406
Query: 229 HTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLS 287
++ H + + FSP+ S I+ + L+ GK V
Sbjct: 407 ARMIGHQKQVNHVTFSPDGSM------IASAGWDNATKLWNARDGKFINTLRGHVAPVYQ 460
Query: 288 VAFSVDNRQIVSSSRDKTIKLWN 310
+FS D+R +V++S+D T+K+WN
Sbjct: 461 CSFSADSRLLVTASKDTTLKVWN 483
Score = 221 (82.9 bits), Expect = 6.7e-27, Sum P(2) = 6.7e-27
Identities = 62/212 (29%), Positives = 101/212 (47%)
Query: 7 QLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHF 66
+L + GH + +P + + S DNT IW D G P+ LKGH+ +
Sbjct: 143 RLAHRIPGHGEPILCAQFSPASSARLATGSGDNTARIW-----DAETGTPKHTLKGHAGW 197
Query: 67 ISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTT-RRFEDHTKDVLSVAFSV-----DNR- 119
+ + S DG + S DKT+R+WD GK + H K V +A+ D
Sbjct: 198 VLGVSWSPDGTRLATCSMDKTVRIWDPETGKQVGSELKGHAKWVQGIAWEPLHLWRDGTP 257
Query: 120 QIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
++VS+S+D T ++W T+ + V GH VSCVR+ + ++ +A D+ VKVW+
Sbjct: 258 RLVSASKDFTARIW-TVNTGRTEHVLSGHKGSVSCVRWGAGNGTGVVYTASHDKTVKVWD 316
Query: 180 LTNCKLKINHSGHTGYLNTVTVSPDGSLCASG 211
L + H ++N + +S D +C +G
Sbjct: 317 AVKGTLLHDLKSHAHWVNHLALSTD-FVCRTG 347
Score = 210 (79.0 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 48/152 (31%), Positives = 75/152 (49%)
Query: 27 KFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDK 86
K + ++S S D T+ ++ D T P R+ GH ++ + S DG+ S WD
Sbjct: 379 KIVERLVSASDDFTMYLFDPLNDGTK---PIARMIGHQKQVNHVTFSPDGSMIASAGWDN 435
Query: 87 TLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVED 146
+LW+ GK H V +FS D+R +V++S+D T+K+WN K
Sbjct: 436 ATKLWNARDGKFINTLRGHVAPVYQCSFSADSRLLVTASKDTTLKVWNVRTG-KLATDLP 494
Query: 147 GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVW 178
GH D V V +SP+ Q + S G D+ V++W
Sbjct: 495 GHEDEVYGVDWSPDGQR--VGSGGRDKAVRLW 524
Score = 206 (77.6 bits), Expect = 8.1e-14, P = 8.1e-14
Identities = 68/237 (28%), Positives = 107/237 (45%)
Query: 12 LNGHNGWVTQIATNP-KFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
L+GH G V+ + + + S D T+ +W D G LK H+H+++ +
Sbjct: 282 LSGHKGSVSCVRWGAGNGTGVVYTASHDKTVKVW-----DAVKGTLLHDLKSHAHWVNHL 336
Query: 71 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 130
LS+D +G +D T + A KT + E + K V + R +VS+S D T+
Sbjct: 337 ALSTDF-VCRTGFFDHTKTVPATAEEKTAKAKERYEK-AARVGGKIVER-LVSASDDFTM 393
Query: 131 KLWNTLAHCKFTIVED-GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINH 189
L++ L I GH V+ V FSP+ +I SAGWD K+WN + K
Sbjct: 394 YLFDPLNDGTKPIARMIGHQKQVNHVTFSPD--GSMIASAGWDNATKLWNARDGKFINTL 451
Query: 190 SGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPN 245
GH + + S D L + KD +W++ GK L H D + + +SP+
Sbjct: 452 RGHVAPVYQCSFSADSRLLVTASKDTTLKVWNVRTGKLATDLPGHEDEVYGVDWSPD 508
Score = 185 (70.2 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
Identities = 50/180 (27%), Positives = 81/180 (45%)
Query: 59 RLKGHSHFISDIVLSSDGNYALS-GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 117
R+ GH I S + L+ GS D T R+WD G + H VL V++S D
Sbjct: 147 RIPGHGEPILCAQFSPASSARLATGSGDNTARIWDAETGTPKHTLKGHAGWVLGVSWSPD 206
Query: 118 NRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQ----NPIIVSAGWDR 173
++ + S DKT+++W+ + GH+ WV + + P H P +VSA D
Sbjct: 207 GTRLATCSMDKTVRIWDPETGKQVGSELKGHAKWVQGIAWEPLHLWRDGTPRLVSASKDF 266
Query: 174 MVKVWNLTNCKLKINHSGHTGYLNTVTVSP-DGS-LCASGGKDMNAMLWDLNDGKHLHTL 231
++W + + + SGH G ++ V +G+ + + D +WD G LH L
Sbjct: 267 TARIWTVNTGRTEHVLSGHKGSVSCVRWGAGNGTGVVYTASHDKTVKVWDAVKGTLLHDL 326
Score = 175 (66.7 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 53/143 (37%), Positives = 67/143 (46%)
Query: 80 LSGSWDKTLRLWD-LAAG-KTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA 137
+S S D T+ L+D L G K R H K V V FS D I S+ D KLWN
Sbjct: 385 VSASDDFTMYLFDPLNDGTKPIARMIGHQKQVNHVTFSPDGSMIASAGWDNATKLWNA-R 443
Query: 138 HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLN 197
KF GH V FS + + ++V+A D +KVWN+ KL + GH +
Sbjct: 444 DGKFINTLRGHVAPVYQCSFSADSR--LLVTASKDTTLKVWNVRTGKLATDLPGHEDEVY 501
Query: 198 TVTVSPDGSLCASGGKDMNAMLW 220
V SPDG SGG+D LW
Sbjct: 502 GVDWSPDGQRVGSGGRDKAVRLW 524
Score = 148 (57.2 bits), Expect = 6.7e-27, Sum P(2) = 6.7e-27
Identities = 39/120 (32%), Positives = 62/120 (51%)
Query: 191 GHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQ 249
GH +N VT SPDGS+ AS G D LW+ DGK ++TL H + FS +
Sbjct: 411 GHQKQVNHVTFSPDGSMIASAGWDNATKLWNARDGKFINTLRGHVAPVYQCSFSAD---S 467
Query: 250 KIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLW 309
++ + S+ + L ++ + GK+ T +V V +S D +++ S RDK ++LW
Sbjct: 468 RLLVTASKD---TTLKVWNVRTGKLATDLPGHEDEVYGVDWSPDGQRVGSGGRDKAVRLW 524
Score = 144 (55.7 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 38/170 (22%), Positives = 74/170 (43%)
Query: 147 GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGS 206
GH + + C +FSP + +G D ++W+ K GH G++ V+ SPDG+
Sbjct: 150 GHGEPILCAQFSPASSARLATGSG-DNTARIWDAETGTPKHTLKGHAGWVLGVSWSPDGT 208
Query: 207 LCASGGKDMNAMLWDLNDGKHLHTLV--HNDIITALCFSPNRSFQKIKLDISRTLQKSNL 264
A+ D +WD GK + + + H + + + P ++ + +
Sbjct: 209 RLATCSMDKTVRIWDPETGKQVGSELKGHAKWVQGIAWEPLHLWRDGTPRLVSASKDFTA 268
Query: 265 ILYPINHGKMETPFFSLFRDVLSVAFSVDNRQ--IVSSSRDKTIKLWNTL 312
++ +N G+ E V V + N + ++S DKT+K+W+ +
Sbjct: 269 RIWTVNTGRTEHVLSGHKGSVSCVRWGAGNGTGVVYTASHDKTVKVWDAV 318
Score = 47 (21.6 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 351 AWSTDGQTLFAGYSDNTIRVWQV 373
++S D + L D T++VW V
Sbjct: 462 SFSADSRLLVTASKDTTLKVWNV 484
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 257 (95.5 bits), Expect = 9.6e-27, Sum P(2) = 9.6e-27
Identities = 62/196 (31%), Positives = 96/196 (48%)
Query: 12 LNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV 71
L+GH VT++ +P F ++S S D T+ +W D G ++ LKGH+ + DI
Sbjct: 104 LSGHRSPVTRVIFHPVF-SLMVSASEDATIKVW-----DYEAGDFERTLKGHTDSVQDIS 157
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
G S S D T++LWD + R H +V SVA + IVS+SRDKT+K
Sbjct: 158 FDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMK 217
Query: 132 LWNTLA-HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS 190
+W +C T GH +WV VR PN ++ S D+ V+VW + + K
Sbjct: 218 MWEVATGYCVKTFT--GHREWVRMVR--PNQDGTLLASCSNDQTVRVWVVATKECKAELR 273
Query: 191 GHTGYLNTVTVSPDGS 206
H + ++ +P+ +
Sbjct: 274 EHEHVVECISWAPESA 289
Score = 219 (82.2 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 71/272 (26%), Positives = 118/272 (43%)
Query: 56 PQK-RLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 114
P+K L GH ++ ++ + +S S D T+++WD AG R + HT V ++F
Sbjct: 99 PEKYALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISF 158
Query: 115 SVDNRQIVSSSRDKTIKLWNTLA-HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDR 173
+ + S S D TIKLW+ C T+ GH VS V PN + IVSA D+
Sbjct: 159 DQTGKLLASCSADMTIKLWDFQGFECIRTM--HGHDHNVSSVAIMPNGDH--IVSASRDK 214
Query: 174 MVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTL-V 232
+K+W + +GH ++ V + DG+L AS D +W + + L
Sbjct: 215 TMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELRE 274
Query: 233 HNDIITALCFSPNRSFQKIKLDISRTLQKSN-----LI---------LYPINHGKMETPF 278
H ++ + ++P + I +KS L+ ++ I+ G
Sbjct: 275 HEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTL 334
Query: 279 FSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWN 310
V V F R +VS + DKT+++W+
Sbjct: 335 VGHDNWVRGVLFHPGGRFVVSCADDKTLRIWD 366
Score = 172 (65.6 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 52/185 (28%), Positives = 84/185 (45%)
Query: 11 TLNGHNGWVTQIATNPKFPDTIL-SCSRDNTLIIWKLTRDDTNYGVPQKR--------LK 61
T GH WV + P T+L SCS D T+ +W + + + +
Sbjct: 229 TFTGHREWVRMV--RPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 286
Query: 62 GHSH-FISDIVLSSD------GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 114
+H IS+ S + G + LSGS DKT+++WD++ G H V V F
Sbjct: 287 ESAHPTISEATGSENKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLF 346
Query: 115 SVDNRQIVSSSRDKTIKLWNTL-AHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDR 173
R +VS + DKT+++W+ C T+ H +V+ + F + +P +V+ D+
Sbjct: 347 HPGGRFVVSCADDKTLRIWDYKNKRCMKTL--SAHEHFVTSLDF--HKASPYVVTGSVDQ 402
Query: 174 MVKVW 178
VKVW
Sbjct: 403 TVKVW 407
Score = 147 (56.8 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 61/259 (23%), Positives = 105/259 (40%)
Query: 122 VSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT 181
V RD K W K+ + GH V+ V F P ++VSA D +KVW+
Sbjct: 85 VGQKRDP--KEWIPRPPEKYAL--SGHRSPVTRVIFHPVFS--LMVSASEDATIKVWDYE 138
Query: 182 NCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITAL 240
+ GHT + ++ G L AS DM LWD + + T+ H+ ++++
Sbjct: 139 AGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSV 198
Query: 241 CFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSS 300
PN +S + K+ + ++ + G F V V + D + S
Sbjct: 199 AIMPNGDHI-----VSASRDKT-MKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASC 252
Query: 301 SRDKTIKLWNTLA-HCKFTIVD----LETKKMVEELRPDVVSQSTKADPPMCLSLAWSTD 355
S D+T+++W CK + + +E E +S++T ++
Sbjct: 253 SNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTISEATGSENKKS-----GKP 307
Query: 356 GQTLFAGYSDNTIRVWQVS 374
G L +G D TI++W +S
Sbjct: 308 GPFLLSGSRDKTIKMWDIS 326
Score = 136 (52.9 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 29/102 (28%), Positives = 51/102 (50%)
Query: 121 IVSSSRDKTIKLWN-TLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
++S SRDKTIK+W+ + C T+V GH +WV V F P + +VS D+ +++W+
Sbjct: 311 LLSGSRDKTIKMWDISTGMCLMTLV--GHDNWVRGVLFHPGGR--FVVSCADDKTLRIWD 366
Query: 180 LTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWD 221
N + S H ++ ++ +G D +W+
Sbjct: 367 YKNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWE 408
Score = 120 (47.3 bits), Expect = 0.00023, P = 0.00023
Identities = 28/84 (33%), Positives = 45/84 (53%)
Query: 11 TLNGHNGWVTQIATNP--KFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFIS 68
TL GH+ WV + +P +F ++SC+ D TL IW D N K L H HF++
Sbjct: 333 TLVGHDNWVRGVLFHPGGRF---VVSCADDKTLRIW----DYKNKRC-MKTLSAHEHFVT 384
Query: 69 DIVLSSDGNYALSGSWDKTLRLWD 92
+ Y ++GS D+T+++W+
Sbjct: 385 SLDFHKASPYVVTGSVDQTVKVWE 408
Score = 92 (37.4 bits), Expect = 9.6e-27, Sum P(2) = 9.6e-27
Identities = 36/119 (30%), Positives = 56/119 (47%)
Query: 193 TGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKI 251
TG N + P G SG +D +WD++ G L TLV H++ + + F P F
Sbjct: 297 TGSENKKSGKP-GPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVS 355
Query: 252 KLDISRTLQKSNLILYPINHGKMETPFFSLFRD-VLSVAFSVDNRQIVSSSRDKTIKLW 309
D +TL+ + Y N M+T S V S+ F + +V+ S D+T+K+W
Sbjct: 356 CAD-DKTLRIWD---YK-NKRCMKT--LSAHEHFVTSLDFHKASPYVVTGSVDQTVKVW 407
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 83/265 (31%), Positives = 136/265 (51%)
Query: 52 NYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 111
NY + + LKGH IS + S DG + S S DKT+++W GK R E H + +
Sbjct: 35 NY-ILKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISD 93
Query: 112 VAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGW 171
+A+S D++ I S+S DKTIK+W+ + K GH ++V V F+P Q+ +IVS +
Sbjct: 94 IAWSQDSKLICSASDDKTIKIWDVESG-KMVKTLKGHKEYVFGVSFNP--QSNLIVSGSF 150
Query: 172 DRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTL 231
D V++W++ + S H+ + V + DG+L SG D +WD G+ L+T+
Sbjct: 151 DENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTI 210
Query: 232 VHND--IITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRD---VL 286
D ++ + FSPN F ++ TL + L L+ N+ K ++ ++ +
Sbjct: 211 STEDGKEVSFVKFSPNGKFV-----LAGTLDNT-LRLWSYNNNKKCLKTYTGHKNEKYCI 264
Query: 287 SVAFSVD-NRQIVSSSRDKTIKLWN 310
FSV + IV+ S D I ++N
Sbjct: 265 FSTFSVTCGKWIVTGSEDNLIYIYN 289
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 74/245 (30%), Positives = 119/245 (48%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
TL GH ++ IA + I S S D T+ IW D G K LKGH ++ +
Sbjct: 83 TLEGHKEGISDIAWSQD-SKLICSASDDKTIKIW-----DVESGKMVKTLKGHKEYVFGV 136
Query: 71 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 130
+ N +SGS+D+ +R+WD+ G+ T+ H+ V V F+ D +VS S D T+
Sbjct: 137 SFNPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTV 196
Query: 131 KLWNTLA-HCKFTI-VEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCK--LK 186
++W+T TI EDG VS V+FSPN + +++ D +++W+ N K LK
Sbjct: 197 RIWDTTTGQLLNTISTEDGKE--VSFVKFSPNGK--FVLAGTLDNTLRLWSYNNNKKCLK 252
Query: 187 INHSGHTG--YLNTVTVSPD-GSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCF 242
++GH Y T S G +G +D +++L + + TL H D++ +
Sbjct: 253 -TYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVAC 311
Query: 243 SPNRS 247
P +
Sbjct: 312 HPTEN 316
Score = 230 (86.0 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 64/216 (29%), Positives = 107/216 (49%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
TL GH +V ++ NP+ + I+S S D + IW D N G K + HS ++ +
Sbjct: 125 TLKGHKEYVFGVSFNPQ-SNLIVSGSFDENVRIW-----DVNTGECTKMISAHSDPVTGV 178
Query: 71 VLSSDGNYALSGSWDKTLRLWDLAAGK--TTRRFEDHTKDVLSVAFSVDNRQIVSSSRDK 128
+ DG +SGS+D T+R+WD G+ T ED K+V V FS + + +++ + D
Sbjct: 179 HFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDG-KEVSFVKFSPNGKFVLAGTLDN 237
Query: 129 TIKLWNTLAHCKFTIVEDGHSDWVSCV--RFSPNHQNPIIVSAGWDRMVKVWNLTNCKLK 186
T++LW+ + K GH + C+ FS IV+ D ++ ++NL ++
Sbjct: 238 TLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSVTC-GKWIVTGSEDNLIYIYNLQTREIV 296
Query: 187 INHSGHTGYLNTVTVSPDGSLCASGG--KDMNAMLW 220
+GH + TV P ++ ASG KD + +W
Sbjct: 297 QTLAGHEDVVLTVACHPTENIIASGALEKDRSVKIW 332
Score = 191 (72.3 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 53/191 (27%), Positives = 91/191 (47%)
Query: 140 KFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTV 199
K+T+ GH +S V+FSP+ + + SA D+ +K+W + K + GH ++ +
Sbjct: 39 KYTL--KGHLKSISSVKFSPDGK--WLASASADKTIKIWGAYDGKFERTLEGHKEGISDI 94
Query: 200 TVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRT 258
S D L S D +WD+ GK + TL H + + + F+P + L +S +
Sbjct: 95 AWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSN-----LIVSGS 149
Query: 259 LQKSNLILYPINHGKMETPFFSLFRD-VLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKF 317
+ N+ ++ +N G+ T S D V V F+ D +VS S D T+++W+T
Sbjct: 150 FDE-NVRIWDVNTGEC-TKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLL 207
Query: 318 TIVDLETKKMV 328
+ E K V
Sbjct: 208 NTISTEDGKEV 218
Score = 53 (23.7 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 9/20 (45%), Positives = 15/20 (75%)
Query: 352 WSTDGQTLFAGYSDNTIRVW 371
+S +G+ + AG DNT+R+W
Sbjct: 223 FSPNGKFVLAGTLDNTLRLW 242
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 266 (98.7 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 65/196 (33%), Positives = 96/196 (48%)
Query: 12 LNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV 71
L+GH VT++ +P F ++S S D T+ +W D G ++ LKGH+ + DI
Sbjct: 104 LSGHRSPVTRVIFHPVF-SVMVSASEDATIKVW-----DYETGDFERTLKGHTDSVQDIS 157
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
G S S D T++LWD + R H +V SVA + IVS+SRDKTIK
Sbjct: 158 FDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 217
Query: 132 LWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS 190
+W +C T GH +WV VR PN +I S D+ V+VW + + K
Sbjct: 218 MWEVQTGYCVKTFT--GHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 191 GHTGYLNTVTVSPDGS 206
H + ++ +P+ S
Sbjct: 274 EHEHVVECISWAPESS 289
Score = 220 (82.5 bits), Expect = 9.7e-16, P = 9.7e-16
Identities = 69/272 (25%), Positives = 118/272 (43%)
Query: 56 PQK-RLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 114
P+K L GH ++ ++ + +S S D T+++WD G R + HT V ++F
Sbjct: 99 PEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF 158
Query: 115 SVDNRQIVSSSRDKTIKLWNTLA-HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDR 173
+ + S S D TIKLW+ C T+ GH VS V PN + IVSA D+
Sbjct: 159 DHSGKLLASCSADMTIKLWDFQGFECIRTM--HGHDHNVSSVAIMPNGDH--IVSASRDK 214
Query: 174 MVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTL-V 232
+K+W + +GH ++ V + DG+L AS D +W + + L
Sbjct: 215 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 233 HNDIITALCFSPNRSFQKIKLDISRTLQKSN-----LI---------LYPINHGKMETPF 278
H ++ + ++P S+ I +KS L+ ++ ++ G
Sbjct: 275 HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL 334
Query: 279 FSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWN 310
V V F + I+S + DKT+++W+
Sbjct: 335 VGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 164 (62.8 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 52/185 (28%), Positives = 83/185 (44%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKL-TRD------DTNYGV------PQ 57
T GH WV + N I SCS D T+ +W + T++ + + V P+
Sbjct: 229 TFTGHREWVRMVRPNQD-GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 58 KRLKGHSHFISDIVLSSD--GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 115
S S G + LSGS DKT+++WD++ G H V V F
Sbjct: 288 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH 347
Query: 116 VDNRQIVSSSRDKTIKLWNTL-AHCKFTIVEDGHSDWVSCVRFSPNHQN-PIIVSAGWDR 173
+ I+S + DKT+++W+ C T+ + H +V+ + F H+ P +V+ D+
Sbjct: 348 SGGKFILSCADDKTLRVWDYKNKRCMKTL--NAHEHFVTSLDF---HKTAPYVVTGSVDQ 402
Query: 174 MVKVW 178
VKVW
Sbjct: 403 TVKVW 407
Score = 154 (59.3 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 57/230 (24%), Positives = 96/230 (41%)
Query: 147 GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGS 206
GH V+ V F P ++VSA D +KVW+ + GHT + ++ G
Sbjct: 106 GHRSPVTRVIFHPVFS--VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 207 LCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLI 265
L AS DM LWD + + T+ H+ ++++ PN +S + K+ +
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI-----VSASRDKT-IK 217
Query: 266 LYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA-HCKFTIVDLET 324
++ + G F V V + D I S S D+T+++W CK + + E
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 325 KKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVS 374
P+ S S+ ++ + G L +G D TI++W VS
Sbjct: 278 VVECISWAPES-SYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326
Score = 125 (49.1 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 28/102 (27%), Positives = 50/102 (49%)
Query: 121 IVSSSRDKTIKLWN-TLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
++S SRDKTIK+W+ + C T+V GH +WV V F + I+S D+ ++VW+
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLV--GHDNWVRGVLFHSGGK--FILSCADDKTLRVWD 366
Query: 180 LTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWD 221
N + + H ++ ++ +G D +W+
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 120 (47.3 bits), Expect = 0.00023, P = 0.00023
Identities = 29/84 (34%), Positives = 44/84 (52%)
Query: 11 TLNGHNGWVTQIA--TNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFIS 68
TL GH+ WV + + KF ILSC+ D TL +W D N K L H HF++
Sbjct: 333 TLVGHDNWVRGVLFHSGGKF---ILSCADDKTLRVW----DYKNKRC-MKTLNAHEHFVT 384
Query: 69 DIVLSSDGNYALSGSWDKTLRLWD 92
+ Y ++GS D+T+++W+
Sbjct: 385 SLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 76 (31.8 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 30/106 (28%), Positives = 49/106 (46%)
Query: 205 GSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSN 263
G SG +D +WD++ G L TLV H++ + + F F D +TL+ +
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD-DKTLRVWD 366
Query: 264 LILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLW 309
Y N M+T + V S+ F +V+ S D+T+K+W
Sbjct: 367 ---YK-NKRCMKT-LNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 266 (98.7 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 65/196 (33%), Positives = 96/196 (48%)
Query: 12 LNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV 71
L+GH VT++ +P F ++S S D T+ +W D G ++ LKGH+ + DI
Sbjct: 104 LSGHRSPVTRVIFHPVF-SVMVSASEDATIKVW-----DYETGDFERTLKGHTDSVQDIS 157
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
G S S D T++LWD + R H +V SVA + IVS+SRDKTIK
Sbjct: 158 FDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 217
Query: 132 LWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS 190
+W +C T GH +WV VR PN +I S D+ V+VW + + K
Sbjct: 218 MWEVQTGYCVKTFT--GHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 191 GHTGYLNTVTVSPDGS 206
H + ++ +P+ S
Sbjct: 274 EHEHVVECISWAPESS 289
Score = 220 (82.5 bits), Expect = 9.7e-16, P = 9.7e-16
Identities = 69/272 (25%), Positives = 118/272 (43%)
Query: 56 PQK-RLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 114
P+K L GH ++ ++ + +S S D T+++WD G R + HT V ++F
Sbjct: 99 PEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF 158
Query: 115 SVDNRQIVSSSRDKTIKLWNTLA-HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDR 173
+ + S S D TIKLW+ C T+ GH VS V PN + IVSA D+
Sbjct: 159 DHSGKLLASCSADMTIKLWDFQGFECIRTM--HGHDHNVSSVAIMPNGDH--IVSASRDK 214
Query: 174 MVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTL-V 232
+K+W + +GH ++ V + DG+L AS D +W + + L
Sbjct: 215 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 233 HNDIITALCFSPNRSFQKIKLDISRTLQKSN-----LI---------LYPINHGKMETPF 278
H ++ + ++P S+ I +KS L+ ++ ++ G
Sbjct: 275 HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL 334
Query: 279 FSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWN 310
V V F + I+S + DKT+++W+
Sbjct: 335 VGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 164 (62.8 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 52/185 (28%), Positives = 83/185 (44%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKL-TRD------DTNYGV------PQ 57
T GH WV + N I SCS D T+ +W + T++ + + V P+
Sbjct: 229 TFTGHREWVRMVRPNQD-GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 58 KRLKGHSHFISDIVLSSD--GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 115
S S G + LSGS DKT+++WD++ G H V V F
Sbjct: 288 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH 347
Query: 116 VDNRQIVSSSRDKTIKLWNTL-AHCKFTIVEDGHSDWVSCVRFSPNHQN-PIIVSAGWDR 173
+ I+S + DKT+++W+ C T+ + H +V+ + F H+ P +V+ D+
Sbjct: 348 SGGKFILSCADDKTLRVWDYKNKRCMKTL--NAHEHFVTSLDF---HKTAPYVVTGSVDQ 402
Query: 174 MVKVW 178
VKVW
Sbjct: 403 TVKVW 407
Score = 154 (59.3 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 57/230 (24%), Positives = 96/230 (41%)
Query: 147 GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGS 206
GH V+ V F P ++VSA D +KVW+ + GHT + ++ G
Sbjct: 106 GHRSPVTRVIFHPVFS--VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 207 LCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLI 265
L AS DM LWD + + T+ H+ ++++ PN +S + K+ +
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI-----VSASRDKT-IK 217
Query: 266 LYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA-HCKFTIVDLET 324
++ + G F V V + D I S S D+T+++W CK + + E
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 325 KKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVS 374
P+ S S+ ++ + G L +G D TI++W VS
Sbjct: 278 VVECISWAPES-SYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326
Score = 125 (49.1 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 28/102 (27%), Positives = 50/102 (49%)
Query: 121 IVSSSRDKTIKLWN-TLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
++S SRDKTIK+W+ + C T+V GH +WV V F + I+S D+ ++VW+
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLV--GHDNWVRGVLFHSGGK--FILSCADDKTLRVWD 366
Query: 180 LTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWD 221
N + + H ++ ++ +G D +W+
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 120 (47.3 bits), Expect = 0.00023, P = 0.00023
Identities = 29/84 (34%), Positives = 44/84 (52%)
Query: 11 TLNGHNGWVTQIA--TNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFIS 68
TL GH+ WV + + KF ILSC+ D TL +W D N K L H HF++
Sbjct: 333 TLVGHDNWVRGVLFHSGGKF---ILSCADDKTLRVW----DYKNKRC-MKTLNAHEHFVT 384
Query: 69 DIVLSSDGNYALSGSWDKTLRLWD 92
+ Y ++GS D+T+++W+
Sbjct: 385 SLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 76 (31.8 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 30/106 (28%), Positives = 49/106 (46%)
Query: 205 GSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSN 263
G SG +D +WD++ G L TLV H++ + + F F D +TL+ +
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD-DKTLRVWD 366
Query: 264 LILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLW 309
Y N M+T + V S+ F +V+ S D+T+K+W
Sbjct: 367 ---YK-NKRCMKT-LNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 266 (98.7 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 65/196 (33%), Positives = 96/196 (48%)
Query: 12 LNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV 71
L+GH VT++ +P F ++S S D T+ +W D G ++ LKGH+ + DI
Sbjct: 104 LSGHRSPVTRVIFHPVF-SVMVSASEDATIKVW-----DYETGDFERTLKGHTDSVQDIS 157
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
G S S D T++LWD + R H +V SVA + IVS+SRDKTIK
Sbjct: 158 FDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 217
Query: 132 LWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS 190
+W +C T GH +WV VR PN +I S D+ V+VW + + K
Sbjct: 218 MWEVQTGYCVKTFT--GHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 191 GHTGYLNTVTVSPDGS 206
H + ++ +P+ S
Sbjct: 274 EHEHVVECISWAPESS 289
Score = 220 (82.5 bits), Expect = 9.7e-16, P = 9.7e-16
Identities = 69/272 (25%), Positives = 118/272 (43%)
Query: 56 PQK-RLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 114
P+K L GH ++ ++ + +S S D T+++WD G R + HT V ++F
Sbjct: 99 PEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF 158
Query: 115 SVDNRQIVSSSRDKTIKLWNTLA-HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDR 173
+ + S S D TIKLW+ C T+ GH VS V PN + IVSA D+
Sbjct: 159 DHSGKLLASCSADMTIKLWDFQGFECIRTM--HGHDHNVSSVAIMPNGDH--IVSASRDK 214
Query: 174 MVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTL-V 232
+K+W + +GH ++ V + DG+L AS D +W + + L
Sbjct: 215 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 233 HNDIITALCFSPNRSFQKIKLDISRTLQKSN-----LI---------LYPINHGKMETPF 278
H ++ + ++P S+ I +KS L+ ++ ++ G
Sbjct: 275 HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL 334
Query: 279 FSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWN 310
V V F + I+S + DKT+++W+
Sbjct: 335 VGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 164 (62.8 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 52/185 (28%), Positives = 83/185 (44%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKL-TRD------DTNYGV------PQ 57
T GH WV + N I SCS D T+ +W + T++ + + V P+
Sbjct: 229 TFTGHREWVRMVRPNQD-GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 58 KRLKGHSHFISDIVLSSD--GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 115
S S G + LSGS DKT+++WD++ G H V V F
Sbjct: 288 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH 347
Query: 116 VDNRQIVSSSRDKTIKLWNTL-AHCKFTIVEDGHSDWVSCVRFSPNHQN-PIIVSAGWDR 173
+ I+S + DKT+++W+ C T+ + H +V+ + F H+ P +V+ D+
Sbjct: 348 SGGKFILSCADDKTLRVWDYKNKRCMKTL--NAHEHFVTSLDF---HKTAPYVVTGSVDQ 402
Query: 174 MVKVW 178
VKVW
Sbjct: 403 TVKVW 407
Score = 154 (59.3 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 57/230 (24%), Positives = 96/230 (41%)
Query: 147 GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGS 206
GH V+ V F P ++VSA D +KVW+ + GHT + ++ G
Sbjct: 106 GHRSPVTRVIFHPVFS--VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 207 LCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLI 265
L AS DM LWD + + T+ H+ ++++ PN +S + K+ +
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI-----VSASRDKT-IK 217
Query: 266 LYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA-HCKFTIVDLET 324
++ + G F V V + D I S S D+T+++W CK + + E
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 325 KKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVS 374
P+ S S+ ++ + G L +G D TI++W VS
Sbjct: 278 VVECISWAPES-SYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326
Score = 125 (49.1 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 28/102 (27%), Positives = 50/102 (49%)
Query: 121 IVSSSRDKTIKLWN-TLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
++S SRDKTIK+W+ + C T+V GH +WV V F + I+S D+ ++VW+
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLV--GHDNWVRGVLFHSGGK--FILSCADDKTLRVWD 366
Query: 180 LTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWD 221
N + + H ++ ++ +G D +W+
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 120 (47.3 bits), Expect = 0.00023, P = 0.00023
Identities = 29/84 (34%), Positives = 44/84 (52%)
Query: 11 TLNGHNGWVTQIA--TNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFIS 68
TL GH+ WV + + KF ILSC+ D TL +W D N K L H HF++
Sbjct: 333 TLVGHDNWVRGVLFHSGGKF---ILSCADDKTLRVW----DYKNKRC-MKTLNAHEHFVT 384
Query: 69 DIVLSSDGNYALSGSWDKTLRLWD 92
+ Y ++GS D+T+++W+
Sbjct: 385 SLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 76 (31.8 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 30/106 (28%), Positives = 49/106 (46%)
Query: 205 GSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSN 263
G SG +D +WD++ G L TLV H++ + + F F D +TL+ +
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD-DKTLRVWD 366
Query: 264 LILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLW 309
Y N M+T + V S+ F +V+ S D+T+K+W
Sbjct: 367 ---YK-NKRCMKT-LNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 266 (98.7 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 65/196 (33%), Positives = 96/196 (48%)
Query: 12 LNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV 71
L+GH VT++ +P F ++S S D T+ +W D G ++ LKGH+ + DI
Sbjct: 104 LSGHRSPVTRVIFHPVF-SVMVSASEDATIKVW-----DYETGDFERTLKGHTDSVQDIS 157
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
G S S D T++LWD + R H +V SVA + IVS+SRDKTIK
Sbjct: 158 FDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 217
Query: 132 LWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS 190
+W +C T GH +WV VR PN +I S D+ V+VW + + K
Sbjct: 218 MWEVQTGYCVKTFT--GHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 191 GHTGYLNTVTVSPDGS 206
H + ++ +P+ S
Sbjct: 274 EHEHVVECISWAPESS 289
Score = 220 (82.5 bits), Expect = 9.7e-16, P = 9.7e-16
Identities = 69/272 (25%), Positives = 118/272 (43%)
Query: 56 PQK-RLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 114
P+K L GH ++ ++ + +S S D T+++WD G R + HT V ++F
Sbjct: 99 PEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF 158
Query: 115 SVDNRQIVSSSRDKTIKLWNTLA-HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDR 173
+ + S S D TIKLW+ C T+ GH VS V PN + IVSA D+
Sbjct: 159 DHSGKLLASCSADMTIKLWDFQGFECIRTM--HGHDHNVSSVAIMPNGDH--IVSASRDK 214
Query: 174 MVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTL-V 232
+K+W + +GH ++ V + DG+L AS D +W + + L
Sbjct: 215 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 233 HNDIITALCFSPNRSFQKIKLDISRTLQKSN-----LI---------LYPINHGKMETPF 278
H ++ + ++P S+ I +KS L+ ++ ++ G
Sbjct: 275 HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL 334
Query: 279 FSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWN 310
V V F + I+S + DKT+++W+
Sbjct: 335 VGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 164 (62.8 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 52/185 (28%), Positives = 83/185 (44%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKL-TRD------DTNYGV------PQ 57
T GH WV + N I SCS D T+ +W + T++ + + V P+
Sbjct: 229 TFTGHREWVRMVRPNQD-GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 58 KRLKGHSHFISDIVLSSD--GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 115
S S G + LSGS DKT+++WD++ G H V V F
Sbjct: 288 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH 347
Query: 116 VDNRQIVSSSRDKTIKLWNTL-AHCKFTIVEDGHSDWVSCVRFSPNHQN-PIIVSAGWDR 173
+ I+S + DKT+++W+ C T+ + H +V+ + F H+ P +V+ D+
Sbjct: 348 SGGKFILSCADDKTLRVWDYKNKRCMKTL--NAHEHFVTSLDF---HKTAPYVVTGSVDQ 402
Query: 174 MVKVW 178
VKVW
Sbjct: 403 TVKVW 407
Score = 154 (59.3 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 57/230 (24%), Positives = 96/230 (41%)
Query: 147 GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGS 206
GH V+ V F P ++VSA D +KVW+ + GHT + ++ G
Sbjct: 106 GHRSPVTRVIFHPVFS--VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 207 LCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLI 265
L AS DM LWD + + T+ H+ ++++ PN +S + K+ +
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI-----VSASRDKT-IK 217
Query: 266 LYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA-HCKFTIVDLET 324
++ + G F V V + D I S S D+T+++W CK + + E
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 325 KKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVS 374
P+ S S+ ++ + G L +G D TI++W VS
Sbjct: 278 VVECISWAPES-SYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326
Score = 125 (49.1 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 28/102 (27%), Positives = 50/102 (49%)
Query: 121 IVSSSRDKTIKLWN-TLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
++S SRDKTIK+W+ + C T+V GH +WV V F + I+S D+ ++VW+
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLV--GHDNWVRGVLFHSGGK--FILSCADDKTLRVWD 366
Query: 180 LTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWD 221
N + + H ++ ++ +G D +W+
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 120 (47.3 bits), Expect = 0.00023, P = 0.00023
Identities = 29/84 (34%), Positives = 44/84 (52%)
Query: 11 TLNGHNGWVTQIA--TNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFIS 68
TL GH+ WV + + KF ILSC+ D TL +W D N K L H HF++
Sbjct: 333 TLVGHDNWVRGVLFHSGGKF---ILSCADDKTLRVW----DYKNKRC-MKTLNAHEHFVT 384
Query: 69 DIVLSSDGNYALSGSWDKTLRLWD 92
+ Y ++GS D+T+++W+
Sbjct: 385 SLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 76 (31.8 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 30/106 (28%), Positives = 49/106 (46%)
Query: 205 GSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSN 263
G SG +D +WD++ G L TLV H++ + + F F D +TL+ +
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD-DKTLRVWD 366
Query: 264 LILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLW 309
Y N M+T + V S+ F +V+ S D+T+K+W
Sbjct: 367 ---YK-NKRCMKT-LNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 266 (98.7 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 65/196 (33%), Positives = 96/196 (48%)
Query: 12 LNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV 71
L+GH VT++ +P F ++S S D T+ +W D G ++ LKGH+ + DI
Sbjct: 104 LSGHRSPVTRVIFHPVF-SVMVSASEDATIKVW-----DYETGDFERTLKGHTDSVQDIS 157
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
G S S D T++LWD + R H +V SVA + IVS+SRDKTIK
Sbjct: 158 FDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 217
Query: 132 LWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS 190
+W +C T GH +WV VR PN +I S D+ V+VW + + K
Sbjct: 218 MWEVQTGYCVKTFT--GHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 191 GHTGYLNTVTVSPDGS 206
H + ++ +P+ S
Sbjct: 274 EHEHVVECISWAPESS 289
Score = 220 (82.5 bits), Expect = 9.7e-16, P = 9.7e-16
Identities = 69/272 (25%), Positives = 118/272 (43%)
Query: 56 PQK-RLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 114
P+K L GH ++ ++ + +S S D T+++WD G R + HT V ++F
Sbjct: 99 PEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF 158
Query: 115 SVDNRQIVSSSRDKTIKLWNTLA-HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDR 173
+ + S S D TIKLW+ C T+ GH VS V PN + IVSA D+
Sbjct: 159 DHSGKLLASCSADMTIKLWDFQGFECIRTM--HGHDHNVSSVAIMPNGDH--IVSASRDK 214
Query: 174 MVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTL-V 232
+K+W + +GH ++ V + DG+L AS D +W + + L
Sbjct: 215 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 233 HNDIITALCFSPNRSFQKIKLDISRTLQKSN-----LI---------LYPINHGKMETPF 278
H ++ + ++P S+ I +KS L+ ++ ++ G
Sbjct: 275 HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL 334
Query: 279 FSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWN 310
V V F + I+S + DKT+++W+
Sbjct: 335 VGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 164 (62.8 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 52/185 (28%), Positives = 83/185 (44%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKL-TRD------DTNYGV------PQ 57
T GH WV + N I SCS D T+ +W + T++ + + V P+
Sbjct: 229 TFTGHREWVRMVRPNQD-GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 58 KRLKGHSHFISDIVLSSD--GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 115
S S G + LSGS DKT+++WD++ G H V V F
Sbjct: 288 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH 347
Query: 116 VDNRQIVSSSRDKTIKLWNTL-AHCKFTIVEDGHSDWVSCVRFSPNHQN-PIIVSAGWDR 173
+ I+S + DKT+++W+ C T+ + H +V+ + F H+ P +V+ D+
Sbjct: 348 SGGKFILSCADDKTLRVWDYKNKRCMKTL--NAHEHFVTSLDF---HKTAPYVVTGSVDQ 402
Query: 174 MVKVW 178
VKVW
Sbjct: 403 TVKVW 407
Score = 154 (59.3 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 57/230 (24%), Positives = 96/230 (41%)
Query: 147 GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGS 206
GH V+ V F P ++VSA D +KVW+ + GHT + ++ G
Sbjct: 106 GHRSPVTRVIFHPVFS--VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 207 LCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLI 265
L AS DM LWD + + T+ H+ ++++ PN +S + K+ +
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI-----VSASRDKT-IK 217
Query: 266 LYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA-HCKFTIVDLET 324
++ + G F V V + D I S S D+T+++W CK + + E
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 325 KKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVS 374
P+ S S+ ++ + G L +G D TI++W VS
Sbjct: 278 VVECISWAPES-SYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326
Score = 125 (49.1 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 28/102 (27%), Positives = 50/102 (49%)
Query: 121 IVSSSRDKTIKLWN-TLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
++S SRDKTIK+W+ + C T+V GH +WV V F + I+S D+ ++VW+
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLV--GHDNWVRGVLFHSGGK--FILSCADDKTLRVWD 366
Query: 180 LTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWD 221
N + + H ++ ++ +G D +W+
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 120 (47.3 bits), Expect = 0.00023, P = 0.00023
Identities = 29/84 (34%), Positives = 44/84 (52%)
Query: 11 TLNGHNGWVTQIA--TNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFIS 68
TL GH+ WV + + KF ILSC+ D TL +W D N K L H HF++
Sbjct: 333 TLVGHDNWVRGVLFHSGGKF---ILSCADDKTLRVW----DYKNKRC-MKTLNAHEHFVT 384
Query: 69 DIVLSSDGNYALSGSWDKTLRLWD 92
+ Y ++GS D+T+++W+
Sbjct: 385 SLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 76 (31.8 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 30/106 (28%), Positives = 49/106 (46%)
Query: 205 GSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSN 263
G SG +D +WD++ G L TLV H++ + + F F D +TL+ +
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD-DKTLRVWD 366
Query: 264 LILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLW 309
Y N M+T + V S+ F +V+ S D+T+K+W
Sbjct: 367 ---YK-NKRCMKT-LNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 266 (98.7 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 65/196 (33%), Positives = 96/196 (48%)
Query: 12 LNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV 71
L+GH VT++ +P F ++S S D T+ +W D G ++ LKGH+ + DI
Sbjct: 104 LSGHRSPVTRVIFHPVF-SVMVSASEDATIKVW-----DYETGDFERTLKGHTDSVQDIS 157
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
G S S D T++LWD + R H +V SVA + IVS+SRDKTIK
Sbjct: 158 FDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 217
Query: 132 LWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS 190
+W +C T GH +WV VR PN +I S D+ V+VW + + K
Sbjct: 218 MWEVQTGYCVKTFT--GHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 191 GHTGYLNTVTVSPDGS 206
H + ++ +P+ S
Sbjct: 274 EHEHVVECISWAPESS 289
Score = 220 (82.5 bits), Expect = 9.7e-16, P = 9.7e-16
Identities = 69/272 (25%), Positives = 118/272 (43%)
Query: 56 PQK-RLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 114
P+K L GH ++ ++ + +S S D T+++WD G R + HT V ++F
Sbjct: 99 PEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF 158
Query: 115 SVDNRQIVSSSRDKTIKLWNTLA-HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDR 173
+ + S S D TIKLW+ C T+ GH VS V PN + IVSA D+
Sbjct: 159 DHSGKLLASCSADMTIKLWDFQGFECIRTM--HGHDHNVSSVAIMPNGDH--IVSASRDK 214
Query: 174 MVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTL-V 232
+K+W + +GH ++ V + DG+L AS D +W + + L
Sbjct: 215 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 233 HNDIITALCFSPNRSFQKIKLDISRTLQKSN-----LI---------LYPINHGKMETPF 278
H ++ + ++P S+ I +KS L+ ++ ++ G
Sbjct: 275 HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL 334
Query: 279 FSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWN 310
V V F + I+S + DKT+++W+
Sbjct: 335 VGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 164 (62.8 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 52/185 (28%), Positives = 83/185 (44%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKL-TRD------DTNYGV------PQ 57
T GH WV + N I SCS D T+ +W + T++ + + V P+
Sbjct: 229 TFTGHREWVRMVRPNQD-GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 58 KRLKGHSHFISDIVLSSD--GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 115
S S G + LSGS DKT+++WD++ G H V V F
Sbjct: 288 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH 347
Query: 116 VDNRQIVSSSRDKTIKLWNTL-AHCKFTIVEDGHSDWVSCVRFSPNHQN-PIIVSAGWDR 173
+ I+S + DKT+++W+ C T+ + H +V+ + F H+ P +V+ D+
Sbjct: 348 SGGKFILSCADDKTLRVWDYKNKRCMKTL--NAHEHFVTSLDF---HKTAPYVVTGSVDQ 402
Query: 174 MVKVW 178
VKVW
Sbjct: 403 TVKVW 407
Score = 154 (59.3 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 57/230 (24%), Positives = 96/230 (41%)
Query: 147 GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGS 206
GH V+ V F P ++VSA D +KVW+ + GHT + ++ G
Sbjct: 106 GHRSPVTRVIFHPVFS--VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 207 LCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLI 265
L AS DM LWD + + T+ H+ ++++ PN +S + K+ +
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI-----VSASRDKT-IK 217
Query: 266 LYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA-HCKFTIVDLET 324
++ + G F V V + D I S S D+T+++W CK + + E
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 325 KKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVS 374
P+ S S+ ++ + G L +G D TI++W VS
Sbjct: 278 VVECISWAPES-SYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326
Score = 125 (49.1 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 28/102 (27%), Positives = 50/102 (49%)
Query: 121 IVSSSRDKTIKLWN-TLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
++S SRDKTIK+W+ + C T+V GH +WV V F + I+S D+ ++VW+
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLV--GHDNWVRGVLFHSGGK--FILSCADDKTLRVWD 366
Query: 180 LTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWD 221
N + + H ++ ++ +G D +W+
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 120 (47.3 bits), Expect = 0.00023, P = 0.00023
Identities = 29/84 (34%), Positives = 44/84 (52%)
Query: 11 TLNGHNGWVTQIA--TNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFIS 68
TL GH+ WV + + KF ILSC+ D TL +W D N K L H HF++
Sbjct: 333 TLVGHDNWVRGVLFHSGGKF---ILSCADDKTLRVW----DYKNKRC-MKTLNAHEHFVT 384
Query: 69 DIVLSSDGNYALSGSWDKTLRLWD 92
+ Y ++GS D+T+++W+
Sbjct: 385 SLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 76 (31.8 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 30/106 (28%), Positives = 49/106 (46%)
Query: 205 GSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSN 263
G SG +D +WD++ G L TLV H++ + + F F D +TL+ +
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD-DKTLRVWD 366
Query: 264 LILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLW 309
Y N M+T + V S+ F +V+ S D+T+K+W
Sbjct: 367 ---YK-NKRCMKT-LNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 266 (98.7 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 65/196 (33%), Positives = 96/196 (48%)
Query: 12 LNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV 71
L+GH VT++ +P F ++S S D T+ +W D G ++ LKGH+ + DI
Sbjct: 104 LSGHRSPVTRVIFHPVF-SVMVSASEDATIKVW-----DYETGDFERTLKGHTDSVQDIS 157
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
G S S D T++LWD + R H +V SVA + IVS+SRDKTIK
Sbjct: 158 FDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 217
Query: 132 LWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS 190
+W +C T GH +WV VR PN +I S D+ V+VW + + K
Sbjct: 218 MWEVQTGYCVKTFT--GHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 191 GHTGYLNTVTVSPDGS 206
H + ++ +P+ S
Sbjct: 274 EHEHVVECISWAPESS 289
Score = 220 (82.5 bits), Expect = 9.7e-16, P = 9.7e-16
Identities = 69/272 (25%), Positives = 118/272 (43%)
Query: 56 PQK-RLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 114
P+K L GH ++ ++ + +S S D T+++WD G R + HT V ++F
Sbjct: 99 PEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF 158
Query: 115 SVDNRQIVSSSRDKTIKLWNTLA-HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDR 173
+ + S S D TIKLW+ C T+ GH VS V PN + IVSA D+
Sbjct: 159 DHSGKLLASCSADMTIKLWDFQGFECIRTM--HGHDHNVSSVAIMPNGDH--IVSASRDK 214
Query: 174 MVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTL-V 232
+K+W + +GH ++ V + DG+L AS D +W + + L
Sbjct: 215 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 233 HNDIITALCFSPNRSFQKIKLDISRTLQKSN-----LI---------LYPINHGKMETPF 278
H ++ + ++P S+ I +KS L+ ++ ++ G
Sbjct: 275 HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL 334
Query: 279 FSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWN 310
V V F + I+S + DKT+++W+
Sbjct: 335 VGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 164 (62.8 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 52/185 (28%), Positives = 83/185 (44%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKL-TRD------DTNYGV------PQ 57
T GH WV + N I SCS D T+ +W + T++ + + V P+
Sbjct: 229 TFTGHREWVRMVRPNQD-GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 58 KRLKGHSHFISDIVLSSD--GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 115
S S G + LSGS DKT+++WD++ G H V V F
Sbjct: 288 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH 347
Query: 116 VDNRQIVSSSRDKTIKLWNTL-AHCKFTIVEDGHSDWVSCVRFSPNHQN-PIIVSAGWDR 173
+ I+S + DKT+++W+ C T+ + H +V+ + F H+ P +V+ D+
Sbjct: 348 SGGKFILSCADDKTLRVWDYKNKRCMKTL--NAHEHFVTSLDF---HKTAPYVVTGSVDQ 402
Query: 174 MVKVW 178
VKVW
Sbjct: 403 TVKVW 407
Score = 154 (59.3 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 57/230 (24%), Positives = 96/230 (41%)
Query: 147 GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGS 206
GH V+ V F P ++VSA D +KVW+ + GHT + ++ G
Sbjct: 106 GHRSPVTRVIFHPVFS--VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 207 LCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLI 265
L AS DM LWD + + T+ H+ ++++ PN +S + K+ +
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI-----VSASRDKT-IK 217
Query: 266 LYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA-HCKFTIVDLET 324
++ + G F V V + D I S S D+T+++W CK + + E
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 325 KKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVS 374
P+ S S+ ++ + G L +G D TI++W VS
Sbjct: 278 VVECISWAPES-SYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326
Score = 125 (49.1 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 28/102 (27%), Positives = 50/102 (49%)
Query: 121 IVSSSRDKTIKLWN-TLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
++S SRDKTIK+W+ + C T+V GH +WV V F + I+S D+ ++VW+
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLV--GHDNWVRGVLFHSGGK--FILSCADDKTLRVWD 366
Query: 180 LTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWD 221
N + + H ++ ++ +G D +W+
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 120 (47.3 bits), Expect = 0.00023, P = 0.00023
Identities = 29/84 (34%), Positives = 44/84 (52%)
Query: 11 TLNGHNGWVTQIA--TNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFIS 68
TL GH+ WV + + KF ILSC+ D TL +W D N K L H HF++
Sbjct: 333 TLVGHDNWVRGVLFHSGGKF---ILSCADDKTLRVW----DYKNKRC-MKTLNAHEHFVT 384
Query: 69 DIVLSSDGNYALSGSWDKTLRLWD 92
+ Y ++GS D+T+++W+
Sbjct: 385 SLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 76 (31.8 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 30/106 (28%), Positives = 49/106 (46%)
Query: 205 GSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSN 263
G SG +D +WD++ G L TLV H++ + + F F D +TL+ +
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD-DKTLRVWD 366
Query: 264 LILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLW 309
Y N M+T + V S+ F +V+ S D+T+K+W
Sbjct: 367 ---YK-NKRCMKT-LNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 266 (98.7 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 65/196 (33%), Positives = 96/196 (48%)
Query: 12 LNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV 71
L+GH VT++ +P F ++S S D T+ +W D G ++ LKGH+ + DI
Sbjct: 104 LSGHRSPVTRVIFHPVF-SVMVSASEDATIKVW-----DYETGDFERTLKGHTDSVQDIS 157
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
G S S D T++LWD + R H +V SVA + IVS+SRDKTIK
Sbjct: 158 FDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 217
Query: 132 LWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS 190
+W +C T GH +WV VR PN +I S D+ V+VW + + K
Sbjct: 218 MWEVQTGYCVKTFT--GHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 191 GHTGYLNTVTVSPDGS 206
H + ++ +P+ S
Sbjct: 274 EHEHVVECISWAPESS 289
Score = 220 (82.5 bits), Expect = 9.7e-16, P = 9.7e-16
Identities = 69/272 (25%), Positives = 118/272 (43%)
Query: 56 PQK-RLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 114
P+K L GH ++ ++ + +S S D T+++WD G R + HT V ++F
Sbjct: 99 PEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF 158
Query: 115 SVDNRQIVSSSRDKTIKLWNTLA-HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDR 173
+ + S S D TIKLW+ C T+ GH VS V PN + IVSA D+
Sbjct: 159 DHSGKLLASCSADMTIKLWDFQGFECIRTM--HGHDHNVSSVAIMPNGDH--IVSASRDK 214
Query: 174 MVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTL-V 232
+K+W + +GH ++ V + DG+L AS D +W + + L
Sbjct: 215 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 233 HNDIITALCFSPNRSFQKIKLDISRTLQKSN-----LI---------LYPINHGKMETPF 278
H ++ + ++P S+ I +KS L+ ++ ++ G
Sbjct: 275 HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL 334
Query: 279 FSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWN 310
V V F + I+S + DKT+++W+
Sbjct: 335 VGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 164 (62.8 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 52/185 (28%), Positives = 83/185 (44%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKL-TRD------DTNYGV------PQ 57
T GH WV + N I SCS D T+ +W + T++ + + V P+
Sbjct: 229 TFTGHREWVRMVRPNQD-GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 58 KRLKGHSHFISDIVLSSD--GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 115
S S G + LSGS DKT+++WD++ G H V V F
Sbjct: 288 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH 347
Query: 116 VDNRQIVSSSRDKTIKLWNTL-AHCKFTIVEDGHSDWVSCVRFSPNHQN-PIIVSAGWDR 173
+ I+S + DKT+++W+ C T+ + H +V+ + F H+ P +V+ D+
Sbjct: 348 SGGKFILSCADDKTLRVWDYKNKRCMKTL--NAHEHFVTSLDF---HKTAPYVVTGSVDQ 402
Query: 174 MVKVW 178
VKVW
Sbjct: 403 TVKVW 407
Score = 154 (59.3 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 57/230 (24%), Positives = 96/230 (41%)
Query: 147 GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGS 206
GH V+ V F P ++VSA D +KVW+ + GHT + ++ G
Sbjct: 106 GHRSPVTRVIFHPVFS--VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 207 LCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLI 265
L AS DM LWD + + T+ H+ ++++ PN +S + K+ +
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI-----VSASRDKT-IK 217
Query: 266 LYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA-HCKFTIVDLET 324
++ + G F V V + D I S S D+T+++W CK + + E
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 325 KKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVS 374
P+ S S+ ++ + G L +G D TI++W VS
Sbjct: 278 VVECISWAPES-SYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326
Score = 125 (49.1 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 28/102 (27%), Positives = 50/102 (49%)
Query: 121 IVSSSRDKTIKLWN-TLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
++S SRDKTIK+W+ + C T+V GH +WV V F + I+S D+ ++VW+
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLV--GHDNWVRGVLFHSGGK--FILSCADDKTLRVWD 366
Query: 180 LTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWD 221
N + + H ++ ++ +G D +W+
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 120 (47.3 bits), Expect = 0.00023, P = 0.00023
Identities = 29/84 (34%), Positives = 44/84 (52%)
Query: 11 TLNGHNGWVTQIA--TNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFIS 68
TL GH+ WV + + KF ILSC+ D TL +W D N K L H HF++
Sbjct: 333 TLVGHDNWVRGVLFHSGGKF---ILSCADDKTLRVW----DYKNKRC-MKTLNAHEHFVT 384
Query: 69 DIVLSSDGNYALSGSWDKTLRLWD 92
+ Y ++GS D+T+++W+
Sbjct: 385 SLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 76 (31.8 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 30/106 (28%), Positives = 49/106 (46%)
Query: 205 GSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSN 263
G SG +D +WD++ G L TLV H++ + + F F D +TL+ +
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD-DKTLRVWD 366
Query: 264 LILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLW 309
Y N M+T + V S+ F +V+ S D+T+K+W
Sbjct: 367 ---YK-NKRCMKT-LNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 266 (98.7 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 65/196 (33%), Positives = 96/196 (48%)
Query: 12 LNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV 71
L+GH VT++ +P F ++S S D T+ +W D G ++ LKGH+ + DI
Sbjct: 104 LSGHRSPVTRVIFHPVF-SVMVSASEDATIKVW-----DYETGDFERTLKGHTDSVEDIS 157
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
G S S D T++LWD + R H +V SVA + IVS+SRDKTIK
Sbjct: 158 FDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 217
Query: 132 LWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS 190
+W +C T GH +WV VR PN +I S D+ V+VW + + K
Sbjct: 218 MWEVQTGYCVKTFT--GHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 191 GHTGYLNTVTVSPDGS 206
H + ++ +P+ S
Sbjct: 274 EHEHVVECISWAPESS 289
Score = 219 (82.2 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 69/272 (25%), Positives = 118/272 (43%)
Query: 56 PQK-RLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 114
P+K L GH ++ ++ + +S S D T+++WD G R + HT V ++F
Sbjct: 99 PEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISF 158
Query: 115 SVDNRQIVSSSRDKTIKLWNTLA-HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDR 173
+ + S S D TIKLW+ C T+ GH VS V PN + IVSA D+
Sbjct: 159 DHSGKLLASCSADMTIKLWDFQGFECIRTM--HGHDHNVSSVAIMPNGDH--IVSASRDK 214
Query: 174 MVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTL-V 232
+K+W + +GH ++ V + DG+L AS D +W + + L
Sbjct: 215 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 233 HNDIITALCFSPNRSFQKIKLDISRTLQKSN-----LI---------LYPINHGKMETPF 278
H ++ + ++P S+ I +KS L+ ++ ++ G
Sbjct: 275 HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL 334
Query: 279 FSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWN 310
V V F + I+S + DKT+++W+
Sbjct: 335 VGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 164 (62.8 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 52/185 (28%), Positives = 83/185 (44%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKL-TRD------DTNYGV------PQ 57
T GH WV + N I SCS D T+ +W + T++ + + V P+
Sbjct: 229 TFTGHREWVRMVRPNQD-GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 58 KRLKGHSHFISDIVLSSD--GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 115
S S G + LSGS DKT+++WD++ G H V V F
Sbjct: 288 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH 347
Query: 116 VDNRQIVSSSRDKTIKLWNTL-AHCKFTIVEDGHSDWVSCVRFSPNHQN-PIIVSAGWDR 173
+ I+S + DKT+++W+ C T+ + H +V+ + F H+ P +V+ D+
Sbjct: 348 SGGKFILSCADDKTLRVWDYKNKRCMKTL--NAHEHFVTSLDF---HKTAPYVVTGSVDQ 402
Query: 174 MVKVW 178
VKVW
Sbjct: 403 TVKVW 407
Score = 154 (59.3 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 57/230 (24%), Positives = 96/230 (41%)
Query: 147 GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGS 206
GH V+ V F P ++VSA D +KVW+ + GHT + ++ G
Sbjct: 106 GHRSPVTRVIFHPVFS--VMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGK 163
Query: 207 LCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLI 265
L AS DM LWD + + T+ H+ ++++ PN +S + K+ +
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI-----VSASRDKT-IK 217
Query: 266 LYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA-HCKFTIVDLET 324
++ + G F V V + D I S S D+T+++W CK + + E
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 325 KKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVS 374
P+ S S+ ++ + G L +G D TI++W VS
Sbjct: 278 VVECISWAPES-SYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326
Score = 125 (49.1 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 28/102 (27%), Positives = 50/102 (49%)
Query: 121 IVSSSRDKTIKLWN-TLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
++S SRDKTIK+W+ + C T+V GH +WV V F + I+S D+ ++VW+
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLV--GHDNWVRGVLFHSGGK--FILSCADDKTLRVWD 366
Query: 180 LTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWD 221
N + + H ++ ++ +G D +W+
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 120 (47.3 bits), Expect = 0.00023, P = 0.00023
Identities = 29/84 (34%), Positives = 44/84 (52%)
Query: 11 TLNGHNGWVTQIA--TNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFIS 68
TL GH+ WV + + KF ILSC+ D TL +W D N K L H HF++
Sbjct: 333 TLVGHDNWVRGVLFHSGGKF---ILSCADDKTLRVW----DYKNKRC-MKTLNAHEHFVT 384
Query: 69 DIVLSSDGNYALSGSWDKTLRLWD 92
+ Y ++GS D+T+++W+
Sbjct: 385 SLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 76 (31.8 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 30/106 (28%), Positives = 49/106 (46%)
Query: 205 GSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSN 263
G SG +D +WD++ G L TLV H++ + + F F D +TL+ +
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD-DKTLRVWD 366
Query: 264 LILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLW 309
Y N M+T + V S+ F +V+ S D+T+K+W
Sbjct: 367 ---YK-NKRCMKT-LNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 92/342 (26%), Positives = 149/342 (43%)
Query: 8 LRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFI 67
L GH +T + +P I S S D ++++W + Y R GH +
Sbjct: 10 LERNFKGHRDAITSLDFSPSGKQ-IASGSVDASVMVWNMKPQSRAY-----RFTGHKDAV 63
Query: 68 SDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRD 127
+ + S + S S DKT+RLW + + F HT V SV FS D + ++++S D
Sbjct: 64 TCVQFSPSAHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDD 123
Query: 128 KTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKI 187
++IKLW+ K H++WV C RFSP+ Q ++VS DR VK+W+ ++ +L
Sbjct: 124 QSIKLWSVHRQ-KIICTLREHNNWVRCARFSPDGQ--LMVSVSDDRTVKLWDASSRQLIH 180
Query: 188 NHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHL-HTLVHNDIITALCFSPNR 246
GY + V P + A+ D +WD+ L H VH+ + AL F P+
Sbjct: 181 TFCEPGGYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSG 240
Query: 247 SFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTI 306
+ + TL+ +L+ G++ V+FS Q S+ D+ +
Sbjct: 241 N-HLLTASSDSTLKILDLL-----EGRLLYTLHGHQGSASCVSFSRSGDQFASAGSDQQV 294
Query: 307 KLWNTLAHCKFTIVD----LETKKMVEELRPDVVSQSTKADP 344
+W T F VD L+ K+ + P + DP
Sbjct: 295 MVWRT----NFDSVDYSRVLQQKR--DHRTPSAQASGAAGDP 330
Score = 118 (46.6 bits), Expect = 0.00039, P = 0.00039
Identities = 34/129 (26%), Positives = 57/129 (44%)
Query: 7 QLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHF 66
QL T G+ + + +P I + S DNT+ +W + R T + + HS
Sbjct: 177 QLIHTFCEPGGYSSYVDFHPS-STCIATASSDNTVRVWDI-RTHTLL----QHYQVHSAA 230
Query: 67 ISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSR 126
++ + GN+ L+ S D TL++ DL G+ H V+FS Q S+
Sbjct: 231 VNALSFHPSGNHLLTASSDSTLKILDLLEGRLLYTLHGHQGSASCVSFSRSGDQFASAGS 290
Query: 127 DKTIKLWNT 135
D+ + +W T
Sbjct: 291 DQQVMVWRT 299
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 265 (98.3 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 65/196 (33%), Positives = 96/196 (48%)
Query: 12 LNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV 71
L+GH VT++ +P F ++S S D T+ +W D G ++ LKGH+ + DI
Sbjct: 104 LSGHRSPVTRVIFHPVF-SVMVSASEDATIKVW-----DYETGDFERTLKGHTDSVQDIS 157
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
G S S D T++LWD + R H +V SVA + IVS+SRDKTIK
Sbjct: 158 FDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 217
Query: 132 LWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS 190
+W +C T GH +WV VR PN +I S D+ V+VW + + K
Sbjct: 218 MWEVQTGYCVKTFT--GHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 191 GHTGYLNTVTVSPDGS 206
H + ++ +P+ S
Sbjct: 274 EHEHVVECISWAPESS 289
Score = 219 (82.2 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 70/272 (25%), Positives = 118/272 (43%)
Query: 56 PQK-RLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 114
P+K L GH ++ ++ + +S S D T+++WD G R + HT V ++F
Sbjct: 99 PEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF 158
Query: 115 SVDNRQIVSSSRDKTIKLWNTLA-HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDR 173
+ + S S D TIKLW+ C T+ GH VS V PN + IVSA D+
Sbjct: 159 DHTGKLLASCSADMTIKLWDFQGFECIRTM--HGHDHNVSSVAIMPNGDH--IVSASRDK 214
Query: 174 MVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTL-V 232
+K+W + +GH ++ V + DG+L AS D +W + + L
Sbjct: 215 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 233 HNDIITALCFSPNRSFQKIKLDISRTLQKSN-----LI---------LYPINHGKMETPF 278
H ++ + ++P S+ I +KS L+ ++ I+ G
Sbjct: 275 HEHVVECISWAPESSYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTL 334
Query: 279 FSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWN 310
V V F + I+S + DKT+++W+
Sbjct: 335 VGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 163 (62.4 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 53/185 (28%), Positives = 85/185 (45%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKL-TRD------DTNYGVPQKRLKGH 63
T GH WV + N I SCS D T+ +W + T++ + + V
Sbjct: 229 TFTGHREWVRMVRPNQD-GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 64 SHF--ISDIVLSSD------GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 115
S + IS+ S G + LSGS DKT+++WD++ G H V V F
Sbjct: 288 SSYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFH 347
Query: 116 VDNRQIVSSSRDKTIKLWNTL-AHCKFTIVEDGHSDWVSCVRFSPNHQN-PIIVSAGWDR 173
+ I+S + DKT+++W+ C T+ + H +V+ + F H+ P +V+ D+
Sbjct: 348 SGGKFILSCADDKTLRVWDFKNKRCMKTL--NAHEHFVTSLDF---HKTAPYVVTGSVDQ 402
Query: 174 MVKVW 178
VKVW
Sbjct: 403 TVKVW 407
Score = 156 (60.0 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 57/230 (24%), Positives = 96/230 (41%)
Query: 147 GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGS 206
GH V+ V F P ++VSA D +KVW+ + GHT + ++ G
Sbjct: 106 GHRSPVTRVIFHPVFS--VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGK 163
Query: 207 LCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLI 265
L AS DM LWD + + T+ H+ ++++ PN +S + K+ +
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI-----VSASRDKT-IK 217
Query: 266 LYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA-HCKFTIVDLET 324
++ + G F V V + D I S S D+T+++W CK + + E
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 325 KKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVS 374
P+ S ST ++ + G L +G D TI++W +S
Sbjct: 278 VVECISWAPES-SYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMWDIS 326
Score = 126 (49.4 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 28/102 (27%), Positives = 50/102 (49%)
Query: 121 IVSSSRDKTIKLWN-TLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
++S SRDKTIK+W+ + C T+V GH +WV V F + I+S D+ ++VW+
Sbjct: 311 LLSGSRDKTIKMWDISTGMCLMTLV--GHDNWVRGVLFHSGGK--FILSCADDKTLRVWD 366
Query: 180 LTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWD 221
N + + H ++ ++ +G D +W+
Sbjct: 367 FKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 120 (47.3 bits), Expect = 0.00023, P = 0.00023
Identities = 29/84 (34%), Positives = 44/84 (52%)
Query: 11 TLNGHNGWVTQIA--TNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFIS 68
TL GH+ WV + + KF ILSC+ D TL +W D N K L H HF++
Sbjct: 333 TLVGHDNWVRGVLFHSGGKF---ILSCADDKTLRVW----DFKNKRC-MKTLNAHEHFVT 384
Query: 69 DIVLSSDGNYALSGSWDKTLRLWD 92
+ Y ++GS D+T+++W+
Sbjct: 385 SLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 76 (31.8 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 26/106 (24%), Positives = 47/106 (44%)
Query: 205 GSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSN 263
G SG +D +WD++ G L TLV H++ + + F F D +TL+
Sbjct: 308 GPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD-DKTLR--- 363
Query: 264 LILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLW 309
++ + + + V S+ F +V+ S D+T+K+W
Sbjct: 364 --VWDFKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>UNIPROTKB|P74598 [details] [associations]
symbol:sll1491 "Uncharacterized WD repeat-containing
protein sll1491" species:1111708 "Synechocystis sp. PCC 6803
substr. Kazusa" [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0030288 EMBL:BA000022
GenomeReviews:BA000022_GR PIR:S76794 RefSeq:NP_442894.1
RefSeq:YP_005652955.1 ProteinModelPortal:P74598 IntAct:P74598
GeneID:12255406 GeneID:952007 KEGG:syn:sll1491 KEGG:syy:SYNGTS_3002
PATRIC:23843592 OMA:KMPEQTI ProtClustDB:CLSK2301952 Uniprot:P74598
Length = 348
Score = 247 (92.0 bits), Expect = 2.2e-26, Sum P(2) = 2.2e-26
Identities = 78/304 (25%), Positives = 138/304 (45%)
Query: 12 LNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV 71
L+G G +T + P + + DN + + L + Y Q+ ++F +D+
Sbjct: 57 LSGFQGIITALNITPD-GKYLAVATADNQITLIDLANQEVVYS--QR--SPVNNF-ADLA 110
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS-SSRDKTI 130
+S+DG + L+ + D + + + G HT V VAFS D IVS S D+TI
Sbjct: 111 ISADGQW-LAIAADNNVDVRRVRDGMRVETLVGHTDKVSGVAFSPDGETIVSVSGGDRTI 169
Query: 131 KLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS 190
++W + + D S V F+P+ I + G DR +K W+ +L
Sbjct: 170 RIWERASGNLIQTLADNLGPTTSVV-FTPDGSQFITGAIGQDRTIKFWDANTFELLGTSP 228
Query: 191 GHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDI-ITALCFSPNRSFQ 249
G++N + V+PDG ++ W+L D K L ++ + I + SPN +
Sbjct: 229 QQPGFINGLAVTPDGRKLVGAVRNF-VKAWNLADAKELFSVRGPSLEINTIAVSPNNRW- 286
Query: 250 KIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLW 309
++ ++ ++++ + +GK T VLS+AFS D + S + DKT+K+W
Sbjct: 287 -----VATANKEGTIMIFDLANGKQVTTLRGHQGWVLSLAFSPDGNTLYSGAEDKTVKIW 341
Query: 310 NTLA 313
+ A
Sbjct: 342 DLSA 345
Score = 194 (73.4 bits), Expect = 6.1e-13, P = 6.1e-13
Identities = 60/216 (27%), Positives = 106/216 (49%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSR-DNTLIIWKLTRDDTNYGVPQKRLKGHSHFISD 69
TL GH V+ +A +P +TI+S S D T+ IW+ R N + L + +
Sbjct: 139 TLVGHTDKVSGVAFSPD-GETIVSVSGGDRTIRIWE--RASGNL---IQTLADNLGPTTS 192
Query: 70 IVLSSDGNYALSGS--WDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRD 127
+V + DG+ ++G+ D+T++ WD + + +A + D R++V + R+
Sbjct: 193 VVFTPDGSQFITGAIGQDRTIKFWDANTFELLGTSPQQPGFINGLAVTPDGRKLVGAVRN 252
Query: 128 KTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKI 187
+K WN LA K G S ++ + SPN N + +A + + +++L N K
Sbjct: 253 -FVKAWN-LADAKELFSVRGPSLEINTIAVSPN--NRWVATANKEGTIMIFDLANGKQVT 308
Query: 188 NHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLN 223
GH G++ ++ SPDG+ SG +D +WDL+
Sbjct: 309 TLRGHQGWVLSLAFSPDGNTLYSGAEDKTVKIWDLS 344
Score = 165 (63.1 bits), Expect = 7.5e-15, Sum P(2) = 7.5e-15
Identities = 67/266 (25%), Positives = 122/266 (45%)
Query: 55 VPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 114
V + L G I+ + ++ DG Y + D + L DLA + + +A
Sbjct: 52 VAVENLSGFQGIITALNITPDGKYLAVATADNQITLIDLANQEVVYSQRSPVNNFADLAI 111
Query: 115 SVDNRQIVSSSRDKTIKLWNTLAHCKF-TIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDR 173
S D Q ++ + D + + + T+V GH+D VS V FSP+ + + VS G DR
Sbjct: 112 SADG-QWLAIAADNNVDVRRVRDGMRVETLV--GHTDKVSGVAFSPDGETIVSVSGG-DR 167
Query: 174 MVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASG--GKDMNAMLWDLNDGKHLHTL 231
+++W + L + + G +V +PDGS +G G+D WD N + L T
Sbjct: 168 TIRIWERASGNLIQTLADNLGPTTSVVFTPDGSQFITGAIGQDRTIKFWDANTFELLGTS 227
Query: 232 VHND-IITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAF 290
I L +P+ +K+ + R K+ + + P SL ++ ++A
Sbjct: 228 PQQPGFINGLAVTPDG--RKL-VGAVRNFVKAWNLADAKELFSVRGP--SL--EINTIAV 280
Query: 291 SVDNRQIVSSSRDKTIKLWNTLAHCK 316
S +NR + +++++ TI +++ LA+ K
Sbjct: 281 SPNNRWVATANKEGTIMIFD-LANGK 305
Score = 133 (51.9 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 38/133 (28%), Positives = 63/133 (47%)
Query: 5 TLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHS 64
T +L GT G++ +A P ++ R N + W L + V +G S
Sbjct: 220 TFELLGTSPQQPGFINGLAVTPD-GRKLVGAVR-NFVKAWNLADAKELFSV-----RGPS 272
Query: 65 HFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSS 124
I+ I +S + + + + + T+ ++DLA GK H VLS+AFS D + S
Sbjct: 273 LEINTIAVSPNNRWVATANKEGTIMIFDLANGKQVTTLRGHQGWVLSLAFSPDGNTLYSG 332
Query: 125 SRDKTIKLWNTLA 137
+ DKT+K+W+ A
Sbjct: 333 AEDKTVKIWDLSA 345
Score = 89 (36.4 bits), Expect = 2.2e-26, Sum P(2) = 2.2e-26
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 348 LSLAWSTDGQTLFAGYSDNTIRVWQVSVTSR 378
LSLA+S DG TL++G D T+++W +S +R
Sbjct: 318 LSLAFSPDGNTLYSGAEDKTVKIWDLSALAR 348
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 266 (98.7 bits), Expect = 2.6e-26, Sum P(2) = 2.6e-26
Identities = 65/196 (33%), Positives = 97/196 (49%)
Query: 12 LNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV 71
L+GH VT++ +P F I+S S D T+ +W D G ++ LKGH+ + DI
Sbjct: 104 LSGHRSPVTRVIFHPVF-SVIVSASEDATIKVW-----DHETGDFERTLKGHTDSVQDIS 157
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
G S S D T++LWD + R H +V SVA + IVS+SRDKTIK
Sbjct: 158 FDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 217
Query: 132 LWNTLA-HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS 190
+W +C T GH +WV VR PN +I S+ D+ V+VW + + K
Sbjct: 218 MWEVATGYCVKTFT--GHREWVRMVR--PNQDGTLIASSSNDQTVRVWVVATKECKAELR 273
Query: 191 GHTGYLNTVTVSPDGS 206
H + ++ +P+ +
Sbjct: 274 EHEHVVECISWAPESA 289
Score = 211 (79.3 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 69/273 (25%), Positives = 119/273 (43%)
Query: 56 PQK-RLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 114
P+K L GH ++ ++ + +S S D T+++WD G R + HT V ++F
Sbjct: 99 PEKYALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISF 158
Query: 115 SVDNRQIVSSSRDKTIKLWNTLA-HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDR 173
+ + S S D TIKLW+ C T+ GH VS V PN + IVSA D+
Sbjct: 159 DHTGKLLASCSADMTIKLWDFQGFECIRTM--HGHDHNVSSVAIMPNGDH--IVSASRDK 214
Query: 174 MVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLW---------DLND 224
+K+W + +GH ++ V + DG+L AS D +W +L +
Sbjct: 215 TIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELRE 274
Query: 225 GKHLHTLV-------HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETP 277
+H+ + H I+ A +S + +S + K+ + ++ ++ G
Sbjct: 275 HEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDKT-IKMWDVSIGMCLMT 333
Query: 278 FFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWN 310
V V + IVS + DKT+++W+
Sbjct: 334 LVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWD 366
Score = 159 (61.0 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 67/262 (25%), Positives = 109/262 (41%)
Query: 122 VSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT 181
+ RD K W K+ + GH V+ V F P +IVSA D +KVW+
Sbjct: 85 IGQKRDP--KEWIPRPPEKYAL--SGHRSPVTRVIFHPVFS--VIVSASEDATIKVWDHE 138
Query: 182 NCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITAL 240
+ GHT + ++ G L AS DM LWD + + T+ H+ ++++
Sbjct: 139 TGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSV 198
Query: 241 CFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSS 300
PN +S + K+ + ++ + G F V V + D I SS
Sbjct: 199 AIMPNGDHI-----VSASRDKT-IKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASS 252
Query: 301 SRDKTIKLWNTLA-HCKFTIVDLETKKMVEELRPDVVSQSTKADPPMCLSLAWSTD---- 355
S D+T+++W CK + E + +VE +S + ++ P L S
Sbjct: 253 SNDQTVRVWVVATKECKAEL--REHEHVVE-----CISWAPESAHPTILEATGSETKKSG 305
Query: 356 --GQTLFAGYSDNTIRVWQVSV 375
G L +G D TI++W VS+
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSI 327
Score = 155 (59.6 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 51/190 (26%), Positives = 82/190 (43%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
T GH WV + N I S S D T+ +W + + + L+ H H + I
Sbjct: 229 TFTGHREWVRMVRPNQD-GTLIASSSNDQTVRVWVVATKEC-----KAELREHEHVVECI 282
Query: 71 ----------VLSSDGN----------YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVL 110
+L + G+ + LSGS DKT+++WD++ G H V
Sbjct: 283 SWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVR 342
Query: 111 SVAFSVDNRQIVSSSRDKTIKLWNTL-AHCKFTIVEDGHSDWVSCVRFSPNHQN-PIIVS 168
V + IVS + DKT+++W+ C T+ H +V+ + F H+ P +V+
Sbjct: 343 GVLVHPGGKYIVSCADDKTLRIWDYKNKRCTKTL--SAHEHFVTSLDF---HKTAPYVVT 397
Query: 169 AGWDRMVKVW 178
D+ VKVW
Sbjct: 398 GSVDQTVKVW 407
Score = 133 (51.9 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 29/102 (28%), Positives = 51/102 (50%)
Query: 121 IVSSSRDKTIKLWN-TLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
++S SRDKTIK+W+ ++ C T+V GH +WV V P + IVS D+ +++W+
Sbjct: 311 LLSGSRDKTIKMWDVSIGMCLMTLV--GHDNWVRGVLVHPGGK--YIVSCADDKTLRIWD 366
Query: 180 LTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWD 221
N + S H ++ ++ +G D +W+
Sbjct: 367 YKNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 28/82 (34%), Positives = 43/82 (52%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
TL GH+ WV + +P I+SC+ D TL IW D N K L H HF++ +
Sbjct: 333 TLVGHDNWVRGVLVHPG-GKYIVSCADDKTLRIW----DYKNKRCT-KTLSAHEHFVTSL 386
Query: 71 VLSSDGNYALSGSWDKTLRLWD 92
Y ++GS D+T+++W+
Sbjct: 387 DFHKTAPYVVTGSVDQTVKVWE 408
Score = 73 (30.8 bits), Expect = 2.6e-26, Sum P(2) = 2.6e-26
Identities = 25/106 (23%), Positives = 47/106 (44%)
Query: 205 GSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSN 263
G SG +D +WD++ G L TLV H++ + + P + D +TL+
Sbjct: 308 GPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCAD-DKTLR--- 363
Query: 264 LILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLW 309
++ + + + V S+ F +V+ S D+T+K+W
Sbjct: 364 --IWDYKNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 263 (97.6 bits), Expect = 4.5e-26, Sum P(2) = 4.5e-26
Identities = 64/196 (32%), Positives = 96/196 (48%)
Query: 12 LNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV 71
L+GH VT++ +P F ++S S D T+ +W D G ++ LKGH+ + DI
Sbjct: 104 LSGHRSPVTRVIFHPVF-SVMVSASEDATIKVW-----DYETGDFERTLKGHTDSVQDIS 157
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
G S S D T++LWD + R H +V SVA + IVS++RDKTIK
Sbjct: 158 FDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIK 217
Query: 132 LWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS 190
+W +C T GH +WV VR PN +I S D+ V+VW + + K
Sbjct: 218 MWEVQTGYCVKTFT--GHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 191 GHTGYLNTVTVSPDGS 206
H + ++ +P+ S
Sbjct: 274 EHEHVVECISWAPESS 289
Score = 220 (82.5 bits), Expect = 9.7e-16, P = 9.7e-16
Identities = 69/272 (25%), Positives = 118/272 (43%)
Query: 56 PQK-RLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 114
P+K L GH ++ ++ + +S S D T+++WD G R + HT V ++F
Sbjct: 99 PEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF 158
Query: 115 SVDNRQIVSSSRDKTIKLWNTLA-HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDR 173
+ + S S D TIKLW+ C T+ GH VS V PN + IVSA D+
Sbjct: 159 DHSGKLLASCSADMTIKLWDFQGFECIRTM--HGHDHNVSSVAIMPNGDH--IVSAARDK 214
Query: 174 MVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTL-V 232
+K+W + +GH ++ V + DG+L AS D +W + + L
Sbjct: 215 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 233 HNDIITALCFSPNRSFQKIKLDISRTLQKSN-----LI---------LYPINHGKMETPF 278
H ++ + ++P S+ I +KS L+ ++ ++ G
Sbjct: 275 HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL 334
Query: 279 FSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWN 310
V V F + I+S + DKT+++W+
Sbjct: 335 VGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 164 (62.8 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 52/185 (28%), Positives = 83/185 (44%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKL-TRD------DTNYGV------PQ 57
T GH WV + N I SCS D T+ +W + T++ + + V P+
Sbjct: 229 TFTGHREWVRMVRPNQD-GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 58 KRLKGHSHFISDIVLSSD--GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 115
S S G + LSGS DKT+++WD++ G H V V F
Sbjct: 288 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH 347
Query: 116 VDNRQIVSSSRDKTIKLWNTL-AHCKFTIVEDGHSDWVSCVRFSPNHQN-PIIVSAGWDR 173
+ I+S + DKT+++W+ C T+ + H +V+ + F H+ P +V+ D+
Sbjct: 348 SGGKFILSCADDKTLRVWDYKNKRCMKTL--NAHEHFVTSLDF---HKTAPYVVTGSVDQ 402
Query: 174 MVKVW 178
VKVW
Sbjct: 403 TVKVW 407
Score = 153 (58.9 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 57/230 (24%), Positives = 95/230 (41%)
Query: 147 GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGS 206
GH V+ V F P ++VSA D +KVW+ + GHT + ++ G
Sbjct: 106 GHRSPVTRVIFHPVFS--VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 207 LCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLI 265
L AS DM LWD + + T+ H+ ++++ PN +S K+ +
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI-----VSAARDKT-IK 217
Query: 266 LYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA-HCKFTIVDLET 324
++ + G F V V + D I S S D+T+++W CK + + E
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 325 KKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVS 374
P+ S S+ ++ + G L +G D TI++W VS
Sbjct: 278 VVECISWAPES-SYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326
Score = 125 (49.1 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 28/102 (27%), Positives = 50/102 (49%)
Query: 121 IVSSSRDKTIKLWN-TLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
++S SRDKTIK+W+ + C T+V GH +WV V F + I+S D+ ++VW+
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLV--GHDNWVRGVLFHSGGK--FILSCADDKTLRVWD 366
Query: 180 LTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWD 221
N + + H ++ ++ +G D +W+
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 120 (47.3 bits), Expect = 0.00023, P = 0.00023
Identities = 29/84 (34%), Positives = 44/84 (52%)
Query: 11 TLNGHNGWVTQIA--TNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFIS 68
TL GH+ WV + + KF ILSC+ D TL +W D N K L H HF++
Sbjct: 333 TLVGHDNWVRGVLFHSGGKF---ILSCADDKTLRVW----DYKNKRC-MKTLNAHEHFVT 384
Query: 69 DIVLSSDGNYALSGSWDKTLRLWD 92
+ Y ++GS D+T+++W+
Sbjct: 385 SLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 76 (31.8 bits), Expect = 4.5e-26, Sum P(2) = 4.5e-26
Identities = 30/106 (28%), Positives = 49/106 (46%)
Query: 205 GSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSN 263
G SG +D +WD++ G L TLV H++ + + F F D +TL+ +
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD-DKTLRVWD 366
Query: 264 LILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLW 309
Y N M+T + V S+ F +V+ S D+T+K+W
Sbjct: 367 ---YK-NKRCMKT-LNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 305 (112.4 bits), Expect = 5.7e-26, P = 5.7e-26
Identities = 85/249 (34%), Positives = 125/249 (50%)
Query: 29 PDTIL---SCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWD 85
P T L + S D I +L + + +G + L+GHS+ + ++ S GS D
Sbjct: 665 PQTALIRSNFSEDLPSWICQLPKVNEKWGAELQTLEGHSNSVWAVLAS--------GSDD 716
Query: 86 KTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVE 145
+T+RLWD A G + E H+ VLSVAFS D R + S S DKT++LW+ +
Sbjct: 717 ETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLR 776
Query: 146 DGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDG 205
GHS+WV V FSP+ + ++ S +D+ V++W+ L+ GH+ + +V SPDG
Sbjct: 777 -GHSNWVRSVAFSPDGR--LLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVAFSPDG 833
Query: 206 SLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCFSPNRSFQKIKLDISRTLQK---S 262
L ASG D LWD G TL+ +T L FS + S+ L S +Q +
Sbjct: 834 RLLASGSFDKTVRLWDPATGTLQQTLIIKGTVTELQFSQDGSYISTNLG-SLNIQSRCGN 892
Query: 263 NLILYPINH 271
NL P H
Sbjct: 893 NLSSSPKMH 901
Score = 248 (92.4 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 54/130 (41%), Positives = 75/130 (57%)
Query: 5 TLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHS 64
T L+ TL GH+GWV +A +P + S S D T+ +W D G Q+ L+GHS
Sbjct: 726 TGSLQQTLEGHSGWVLSVAFSPD-GRLLASGSFDKTVRLW-----DPATGSLQQTLRGHS 779
Query: 65 HFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSS 124
+++ + S DG SGS+DKT+RLWD A G + H+ V SVAFS D R + S
Sbjct: 780 NWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVAFSPDGRLLASG 839
Query: 125 SRDKTIKLWN 134
S DKT++LW+
Sbjct: 840 SFDKTVRLWD 849
Score = 246 (91.7 bits), Expect = 5.4e-18, P = 5.4e-18
Identities = 68/208 (32%), Positives = 105/208 (50%)
Query: 32 ILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLW 91
+ S S D T+ +W D G Q+ L+GHS ++ + S DG SGS+DKT+RLW
Sbjct: 710 LASGSDDETVRLW-----DPATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLW 764
Query: 92 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDW 151
D A G + H+ V SVAFS D R + S S DKT++LW+ + GHSD
Sbjct: 765 DPATGSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLR-GHSDT 823
Query: 152 VSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASG 211
V V FSP+ + ++ S +D+ V++W+ L+ G + + S DGS ++
Sbjct: 824 VRSVAFSPDGR--LLASGSFDKTVRLWDPATGTLQQTLI-IKGTVTELQFSQDGSYISTN 880
Query: 212 GKDMNAMLWDLNDGKHLHTL--VHNDII 237
+N G +L + +H+DI+
Sbjct: 881 LGSLNIQS---RCGNNLSSSPKMHSDIL 905
Score = 183 (69.5 bits), Expect = 8.3e-11, P = 8.3e-11
Identities = 51/164 (31%), Positives = 80/164 (48%)
Query: 151 WVSCVRFSPNHQNPI---IVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSL 207
W + ++ H N + + S D V++W+ L+ GH+G++ +V SPDG L
Sbjct: 692 WGAELQTLEGHSNSVWAVLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRL 751
Query: 208 CASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLIL 266
ASG D LWD G TL H++ + ++ FSP+ +L S + K+ +
Sbjct: 752 LASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDG-----RLLASGSFDKTVRLW 806
Query: 267 YPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWN 310
P G ++ V SVAFS D R + S S DKT++LW+
Sbjct: 807 DPAT-GSLQQTLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWD 849
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 90/319 (28%), Positives = 154/319 (48%)
Query: 12 LNGHNGWVTQIATNPKFPDTIL-SCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
L GH +T++ +P + TI+ SCS D T+ +W D G ++ LKGH+ ++DI
Sbjct: 102 LTGHRLPITRVIFHPLW--TIMASCSEDATIKVW-----DYETGQLERTLKGHTDAVNDI 154
Query: 71 VLSSDGNYALSGSWDKTLRLWDLAAGKT---TRRFEDHTKDVLSVAFSVDNRQIVSSSRD 127
+ + G +S S D +++LWD G+T + + H V SV F ++S+SRD
Sbjct: 155 AIDAAGKQLVSCSSDLSIKLWDF--GQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSASRD 212
Query: 128 KTIKLWN-TLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT--NCK 184
TIK W+ + +C +T GH+DWV +R S + + SA D+ V VW+ + K
Sbjct: 213 HTIKQWDISTGYCVYTF--RGHNDWVRMIRIS--NDGTLFASASLDQTVTVWSFATKSAK 268
Query: 185 LKINHSGH----------TGYLNTVTVSPDGS---LCASGGKDMNAMLWDLNDGKHLHTL 231
L + H T Y N P+G+ + SG +D + W++N G L TL
Sbjct: 269 LVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNINTGDVLFTL 328
Query: 232 V-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAF 290
+ H + + L F P + I + +TL+ ++ ++ + + V +VAF
Sbjct: 329 LAHENWVRGLAFHPKGKYL-ISVADDKTLR-----VWELSAQRCMKAIEAHEHFVSTVAF 382
Query: 291 SVDNRQIVSSSRDKTIKLW 309
+ +++ S D + K+W
Sbjct: 383 HQTSPFVITGSVDMSCKVW 401
Score = 254 (94.5 bits), Expect = 5.5e-20, P = 5.5e-20
Identities = 68/259 (26%), Positives = 110/259 (42%)
Query: 4 ETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGH 63
ET QL TL GH V IA + ++SCS D ++ +W + Y K LKGH
Sbjct: 136 ETGQLERTLKGHTDAVNDIAIDAAGKQ-LVSCSSDLSIKLWDFGQ---TYDC-LKSLKGH 190
Query: 64 SHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 123
H +S + G++ LS S D T++ WD++ G F H V + S D S
Sbjct: 191 EHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDGTLFAS 250
Query: 124 SSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNH-------QNP------IIVSAG 170
+S D+T+ +W+ ++ D H V CV ++P+ Q P I+ S
Sbjct: 251 ASLDQTVTVWSFATKSAKLVLRD-HEHAVECVEWAPDTAYTNVTGQQPEGNSTHILFSGS 309
Query: 171 WDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHT 230
DR +K WN+ + H ++ + P G S D +W+L+ + +
Sbjct: 310 RDRSIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRVWELSAQRCMKA 369
Query: 231 L-VHNDIITALCFSPNRSF 248
+ H ++ + F F
Sbjct: 370 IEAHEHFVSTVAFHQTSPF 388
Score = 217 (81.4 bits), Expect = 6.2e-17, Sum P(2) = 6.2e-17
Identities = 65/268 (24%), Positives = 119/268 (44%)
Query: 58 KRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 117
++L GH I+ ++ S S D T+++WD G+ R + HT V +A
Sbjct: 100 QKLTGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAA 159
Query: 118 NRQIVSSSRDKTIKLWN--TLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMV 175
+Q+VS S D +IKLW+ C ++ GH VS V F P ++SA D +
Sbjct: 160 GKQLVSCSSDLSIKLWDFGQTYDCLKSL--KGHEHTVSSVTFLPT--GDFVLSASRDHTI 215
Query: 176 KVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL-NDGKHLHTLVHN 234
K W+++ GH ++ + +S DG+L AS D +W L H
Sbjct: 216 KQWDISTGYCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLVLRDHE 275
Query: 235 DIITALCFSPNRSF-----QKIKLDISRTL----QKSNLILYPINHGKMETPFFSLFRDV 285
+ + ++P+ ++ Q+ + + + L + ++ + IN G + + V
Sbjct: 276 HAVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNINTGDVLFTLLAHENWV 335
Query: 286 LSVAFSVDNRQIVSSSRDKTIKLWNTLA 313
+AF + ++S + DKT+++W A
Sbjct: 336 RGLAFHPKGKYLISVADDKTLRVWELSA 363
Score = 206 (77.6 bits), Expect = 4.1e-14, P = 4.1e-14
Identities = 62/234 (26%), Positives = 109/234 (46%)
Query: 4 ETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGH 63
+T +L GH V+ + P D +LS SRD+T+ W ++ T Y V +GH
Sbjct: 179 QTYDCLKSLKGHEHTVSSVTFLPT-GDFVLSASRDHTIKQWDIS---TGYCV--YTFRGH 232
Query: 64 SHFISDIVLSSDGNYALSGSWDKTLRLWDLA--AGKTTRRFEDHTKDVLS----VAFS-V 116
+ ++ I +S+DG S S D+T+ +W A + K R +H + + A++ V
Sbjct: 233 NDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLVLRDHEHAVECVEWAPDTAYTNV 292
Query: 117 DNRQ--------IVSSSRDKTIKLWN-TLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIV 167
+Q + S SRD++IK WN FT++ H +WV + F P + ++
Sbjct: 293 TGQQPEGNSTHILFSGSRDRSIKAWNINTGDVLFTLL--AHENWVRGLAFHP--KGKYLI 348
Query: 168 SAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWD 221
S D+ ++VW L+ + H +++TV +G DM+ +W+
Sbjct: 349 SVADDKTLRVWELSAQRCMKAIEAHEHFVSTVAFHQTSPFVITGSVDMSCKVWE 402
Score = 144 (55.7 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 58/226 (25%), Positives = 102/226 (45%)
Query: 99 TRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN-TLAHCKFTIVEDGHSDWVSCVRF 157
T++ H + V F + S S D TIK+W+ + T+ GH+D V+ +
Sbjct: 99 TQKLTGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTL--KGHTDAVNDIAI 156
Query: 158 SPNHQNPIIVSAGWDRMVKVWNLT---NCKLKINHSGHTGYLNTVTVSPDGSLCASGGKD 214
+ +VS D +K+W+ +C LK + GH +++VT P G S +D
Sbjct: 157 DAAGKQ--LVSCSSDLSIKLWDFGQTYDC-LK-SLKGHEHTVSSVTFLPTGDFVLSASRD 212
Query: 215 MNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRS-FQKIKLDISRTL-----QKSNLILY 267
WD++ G ++T HND + + S + + F LD + T+ + + L+L
Sbjct: 213 HTIKQWDISTGYCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLVLR 272
Query: 268 PINHGK--METPFFSLFRDVLSVAFSVDNRQIV-SSSRDKTIKLWN 310
H +E + + +V ++ I+ S SRD++IK WN
Sbjct: 273 DHEHAVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWN 318
Score = 136 (52.9 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 55/231 (23%), Positives = 88/231 (38%)
Query: 147 GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGS 206
GH ++ V F P I+ S D +KVW+ +L+ GHT +N + + G
Sbjct: 104 GHRLPITRVIFHPLWT--IMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGK 161
Query: 207 LCASGGKDMNAMLWDLNDGKH-LHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNL 264
S D++ LWD L +L H ++++ F P F L SR +
Sbjct: 162 QLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDFV---LSASRD---HTI 215
Query: 265 ILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWN-TLAHCKFTIVDLE 323
+ I+ G F V + S D S+S D+T+ +W+ K + D E
Sbjct: 216 KQWDISTGYCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLVLRDHE 275
Query: 324 TKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVS 374
E PD + P LF+G D +I+ W ++
Sbjct: 276 HAVECVEWAPDTAYTNVTGQQPE------GNSTHILFSGSRDRSIKAWNIN 320
Score = 51 (23.0 bits), Expect = 6.2e-17, Sum P(2) = 6.2e-17
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 350 LAWSTDGQTLFAGYSDNTIRVWQVS 374
LA+ G+ L + D T+RVW++S
Sbjct: 338 LAFHPKGKYLISVADDKTLRVWELS 362
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 266 (98.7 bits), Expect = 7.0e-26, Sum P(2) = 7.0e-26
Identities = 72/256 (28%), Positives = 128/256 (50%)
Query: 60 LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 119
++GH+ IS + S G + + S DKT+++W+++ R H V A+S D++
Sbjct: 75 IEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADSK 134
Query: 120 QIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
IV++S DKT+K++ + K GH+++V C F+P Q+ ++VS +D V++W+
Sbjct: 135 SIVTASDDKTLKIYE-VPTVKMAKTLKGHTNYVFCCNFNP--QSSLVVSGSFDESVRIWD 191
Query: 180 LTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV--HNDII 237
+ H+ ++ V+ + DGSL SG D +WD +G+ + TLV N +
Sbjct: 192 VRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPV 251
Query: 238 TALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVA--FSVDN- 294
+ FSPN + + ++ TL+ L+ GK + + + FSV
Sbjct: 252 AFVKFSPNGKYI-LSSNLDNTLK-----LWDFGKGKTLKQYQGHENNKYCIFANFSVTGG 305
Query: 295 RQIVSSSRDKTIKLWN 310
+ I+S S D I +WN
Sbjct: 306 KWIISGSEDCKIYVWN 321
Score = 231 (86.4 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 66/239 (27%), Positives = 114/239 (47%)
Query: 6 LQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSH 65
L TL GH V A + +I++ S D TL I+++ K LKGH++
Sbjct: 111 LSCERTLTGHKLGVNDFAWSAD-SKSIVTASDDKTLKIYEVPTVKM-----AKTLKGHTN 164
Query: 66 FISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSS 125
++ + + +SGS+D+++R+WD+ G + H+ V +V+F+ D I S S
Sbjct: 165 YVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGS 224
Query: 126 RDKTIKLWNTL-AHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCK 184
D +++W+T C T+V+D + V+ V+FSPN + I+S+ D +K+W+ K
Sbjct: 225 YDGLVRIWDTANGQCVKTLVDDENPP-VAFVKFSPNGK--YILSSNLDNTLKLWDFGKGK 281
Query: 185 LKINHSGHTG--YLNTVTVS-PDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITA 239
+ GH Y S G SG +D +W+L + + +L H + A
Sbjct: 282 TLKQYQGHENNKYCIFANFSVTGGKWIISGSEDCKIYVWNLQTKEVVQSLEGHTQAVIA 340
Score = 221 (82.9 bits), Expect = 5.2e-18, Sum P(2) = 5.2e-18
Identities = 65/220 (29%), Positives = 112/220 (50%)
Query: 95 AG-KTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTL-AHCKFTIVEDGHSDWV 152
AG K E HTK + +V FS + + +SS DKT+K+WN C+ T+ GH V
Sbjct: 67 AGYKLISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLT--GHKLGV 124
Query: 153 SCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGG 212
+ +S + ++ IV+A D+ +K++ + K+ GHT Y+ +P SL SG
Sbjct: 125 NDFAWSADSKS--IVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGS 182
Query: 213 KDMNAMLWDLNDGKHLHTL-VHNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINH 271
D + +WD+ G + TL H+D ++A+ F+ + S I+ + ++ +
Sbjct: 183 FDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSL------ITSGSYDGLVRIWDTAN 236
Query: 272 GK-METPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWN 310
G+ ++T V V FS + + I+SS+ D T+KLW+
Sbjct: 237 GQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWD 276
Score = 221 (82.9 bits), Expect = 4.6e-16, P = 4.6e-16
Identities = 66/221 (29%), Positives = 103/221 (46%)
Query: 5 TLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHS 64
T+++ TL GH +V NP+ ++S S D ++ IW D G+ K L HS
Sbjct: 152 TVKMAKTLKGHTNYVFCCNFNPQ-SSLVVSGSFDESVRIW-----DVRTGMCVKTLPAHS 205
Query: 65 HFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF-EDHTKDVLSVAFSVDNRQIVS 123
+S + + DG+ SGS+D +R+WD A G+ + +D V V FS + + I+S
Sbjct: 206 DPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGKYILS 265
Query: 124 SSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCV--RFSPNHQNPIIVSAGWDRMVKVWNLT 181
S+ D T+KLW+ K GH + C+ FS I+S D + VWNL
Sbjct: 266 SNLDNTLKLWD-FGKGKTLKQYQGHENNKYCIFANFSVTG-GKWIISGSEDCKIYVWNLQ 323
Query: 182 NCKLKINHSGHTGYLNTVTVSPDGSLCASGG--KDMNAMLW 220
++ + GHT + P ++ ASG D +W
Sbjct: 324 TKEVVQSLEGHTQAVIASDCHPMQNMIASGALEPDNTIRIW 364
Score = 141 (54.7 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 59/243 (24%), Positives = 110/243 (45%)
Query: 146 DGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDG 205
+GH+ +S V+FSP + + ++ D+ VK+WN+++ + +GH +N S D
Sbjct: 76 EGHTKSISAVKFSPCGK--FLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADS 133
Query: 206 SLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNL 264
+ D ++++ K TL H + + F+P S L +S + +S +
Sbjct: 134 KSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSS-----LVVSGSFDES-V 187
Query: 265 ILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTL-AHCKFTIVDLE 323
++ + G + V +V+F+ D I S S D +++W+T C T+VD E
Sbjct: 188 RIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDE 247
Query: 324 TKKMV-EELRPD-VVSQSTKADPPMCLSLAWSTD-GQTL--FAGYSDNTIRVW-QVSVTS 377
+ + P+ S+ D + L W G+TL + G+ +N ++ SVT
Sbjct: 248 NPPVAFVKFSPNGKYILSSNLDNTLKL---WDFGKGKTLKQYQGHENNKYCIFANFSVT- 303
Query: 378 RGG 380
GG
Sbjct: 304 -GG 305
Score = 53 (23.7 bits), Expect = 7.0e-26, Sum P(2) = 7.0e-26
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 315 CKFTIVDLETKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQ 372
CK + +L+TK++V+ L + PM +A G A DNTIR+W+
Sbjct: 315 CKIYVWNLQTKEVVQSLEGHTQAVIASDCHPMQNMIA---SG----ALEPDNTIRIWR 365
Score = 38 (18.4 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 347 CLSLAWS-TDGQTLFAGYSDNTIRVWQV 373
C+ +S T G+ + +G D I VW +
Sbjct: 295 CIFANFSVTGGKWIISGSEDCKIYVWNL 322
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 91/310 (29%), Positives = 148/310 (47%)
Query: 8 LRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFI 67
L+ TL GH V+ + +P + + S S D + IW D + +K + GH I
Sbjct: 11 LKFTLAGHTKAVSSVKFSPN-GEWLASSSADKLIKIWGAY--DGKF---EKTISGHKLGI 64
Query: 68 SDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRD 127
SD+ SSD N +S S DKTL++WD+++GK + + H+ V F+ + IVS S D
Sbjct: 65 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 124
Query: 128 KTIKLWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCK-L 185
+++++W+ C T+ HSD VS V F N +IVS+ +D + ++W+ + + L
Sbjct: 125 ESVRIWDVKTGKCLKTL--PAHSDPVSAVHF--NRDGSLIVSSSYDGLCRIWDTASGQCL 180
Query: 186 KINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSP 244
K ++ V SP+G + D LWD + GK L T H + C
Sbjct: 181 KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKN--EKYCIFA 238
Query: 245 NRSFQKIKLDISRTLQKSNLI-LYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSS-- 301
N S K +S + + NL+ ++ + ++ V+S A I S++
Sbjct: 239 NFSVTGGKWIVSGS--EDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALE 296
Query: 302 RDKTIKLWNT 311
DKTIKLW +
Sbjct: 297 NDKTIKLWKS 306
Score = 106 (42.4 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 34/130 (26%), Positives = 63/130 (48%)
Query: 182 NCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDI-ITAL 240
N LK +GHT +++V SP+G AS D +W DGK T+ + + I+ +
Sbjct: 8 NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 67
Query: 241 CFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSS 300
+S + + L +S + K+ L ++ ++ GK V F+ + IVS
Sbjct: 68 AWSSDSN-----LLVSASDDKT-LKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 121
Query: 301 SRDKTIKLWN 310
S D+++++W+
Sbjct: 122 SFDESVRIWD 131
Score = 54 (24.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 343 DPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVS 374
+PP+ + +S +G+ + A DNT+++W S
Sbjct: 188 NPPVSF-VKFSPNGKYILAATLDNTLKLWDYS 218
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 91/310 (29%), Positives = 148/310 (47%)
Query: 8 LRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFI 67
L+ TL GH V+ + +P + + S S D + IW D + +K + GH I
Sbjct: 37 LKFTLAGHTKAVSSVKFSPN-GEWLASSSADKLIKIWGAY--DGKF---EKTISGHKLGI 90
Query: 68 SDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRD 127
SD+ SSD N +S S DKTL++WD+++GK + + H+ V F+ + IVS S D
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 150
Query: 128 KTIKLWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCK-L 185
+++++W+ C T+ HSD VS V F N +IVS+ +D + ++W+ + + L
Sbjct: 151 ESVRIWDVKTGKCLKTL--PAHSDPVSAVHF--NRDGSLIVSSSYDGLCRIWDTASGQCL 206
Query: 186 KINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSP 244
K ++ V SP+G + D LWD + GK L T H + C
Sbjct: 207 KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKN--EKYCIFA 264
Query: 245 NRSFQKIKLDISRTLQKSNLI-LYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSS-- 301
N S K +S + + NL+ ++ + ++ V+S A I S++
Sbjct: 265 NFSVTGGKWIVSGS--EDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALE 322
Query: 302 RDKTIKLWNT 311
DKTIKLW +
Sbjct: 323 NDKTIKLWKS 332
Score = 106 (42.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 34/130 (26%), Positives = 63/130 (48%)
Query: 182 NCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDI-ITAL 240
N LK +GHT +++V SP+G AS D +W DGK T+ + + I+ +
Sbjct: 34 NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 93
Query: 241 CFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSS 300
+S + + L +S + K+ L ++ ++ GK V F+ + IVS
Sbjct: 94 AWSSDSN-----LLVSASDDKT-LKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 147
Query: 301 SRDKTIKLWN 310
S D+++++W+
Sbjct: 148 SFDESVRIWD 157
Score = 54 (24.1 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 343 DPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVS 374
+PP+ + +S +G+ + A DNT+++W S
Sbjct: 214 NPPVSF-VKFSPNGKYILAATLDNTLKLWDYS 244
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 91/310 (29%), Positives = 148/310 (47%)
Query: 8 LRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFI 67
L+ TL GH V+ + +P + + S S D + IW D + +K + GH I
Sbjct: 37 LKFTLAGHTKAVSSVKFSPN-GEWLASSSADKLIKIWGAY--DGKF---EKTISGHKLGI 90
Query: 68 SDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRD 127
SD+ SSD N +S S DKTL++WD+++GK + + H+ V F+ + IVS S D
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 150
Query: 128 KTIKLWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCK-L 185
+++++W+ C T+ HSD VS V F N +IVS+ +D + ++W+ + + L
Sbjct: 151 ESVRIWDVKTGKCLKTL--PAHSDPVSAVHF--NRDGSLIVSSSYDGLCRIWDTASGQCL 206
Query: 186 KINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSP 244
K ++ V SP+G + D LWD + GK L T H + C
Sbjct: 207 KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKN--EKYCIFA 264
Query: 245 NRSFQKIKLDISRTLQKSNLI-LYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSS-- 301
N S K +S + + NL+ ++ + ++ V+S A I S++
Sbjct: 265 NFSVTGGKWIVSGS--EDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALE 322
Query: 302 RDKTIKLWNT 311
DKTIKLW +
Sbjct: 323 NDKTIKLWKS 332
Score = 106 (42.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 34/130 (26%), Positives = 63/130 (48%)
Query: 182 NCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDI-ITAL 240
N LK +GHT +++V SP+G AS D +W DGK T+ + + I+ +
Sbjct: 34 NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 93
Query: 241 CFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSS 300
+S + + L +S + K+ L ++ ++ GK V F+ + IVS
Sbjct: 94 AWSSDSN-----LLVSASDDKT-LKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 147
Query: 301 SRDKTIKLWN 310
S D+++++W+
Sbjct: 148 SFDESVRIWD 157
Score = 54 (24.1 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 343 DPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVS 374
+PP+ + +S +G+ + A DNT+++W S
Sbjct: 214 NPPVSF-VKFSPNGKYILAATLDNTLKLWDYS 244
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 91/310 (29%), Positives = 148/310 (47%)
Query: 8 LRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFI 67
L+ TL GH V+ + +P + + S S D + IW D + +K + GH I
Sbjct: 37 LKFTLAGHTKAVSSVKFSPN-GEWLASSSADKLIKIWGAY--DGKF---EKTISGHKLGI 90
Query: 68 SDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRD 127
SD+ SSD N +S S DKTL++WD+++GK + + H+ V F+ + IVS S D
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 150
Query: 128 KTIKLWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCK-L 185
+++++W+ C T+ HSD VS V F N +IVS+ +D + ++W+ + + L
Sbjct: 151 ESVRIWDVKTGKCLKTL--PAHSDPVSAVHF--NRDGSLIVSSSYDGLCRIWDTASGQCL 206
Query: 186 KINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSP 244
K ++ V SP+G + D LWD + GK L T H + C
Sbjct: 207 KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKN--EKYCIFA 264
Query: 245 NRSFQKIKLDISRTLQKSNLI-LYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSS-- 301
N S K +S + + NL+ ++ + ++ V+S A I S++
Sbjct: 265 NFSVTGGKWIVSGS--EDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALE 322
Query: 302 RDKTIKLWNT 311
DKTIKLW +
Sbjct: 323 NDKTIKLWKS 332
Score = 106 (42.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 34/130 (26%), Positives = 63/130 (48%)
Query: 182 NCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDI-ITAL 240
N LK +GHT +++V SP+G AS D +W DGK T+ + + I+ +
Sbjct: 34 NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 93
Query: 241 CFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSS 300
+S + + L +S + K+ L ++ ++ GK V F+ + IVS
Sbjct: 94 AWSSDSN-----LLVSASDDKT-LKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 147
Query: 301 SRDKTIKLWN 310
S D+++++W+
Sbjct: 148 SFDESVRIWD 157
Score = 54 (24.1 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 343 DPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVS 374
+PP+ + +S +G+ + A DNT+++W S
Sbjct: 214 NPPVSF-VKFSPNGKYILAATLDNTLKLWDYS 244
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 91/310 (29%), Positives = 148/310 (47%)
Query: 8 LRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFI 67
L+ TL GH V+ + +P + + S S D + IW D + +K + GH I
Sbjct: 37 LKFTLAGHTKAVSSVKFSPN-GEWLASSSADKLIKIWGAY--DGKF---EKTISGHKLGI 90
Query: 68 SDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRD 127
SD+ SSD N +S S DKTL++WD+++GK + + H+ V F+ + IVS S D
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 150
Query: 128 KTIKLWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCK-L 185
+++++W+ C T+ HSD VS V F N +IVS+ +D + ++W+ + + L
Sbjct: 151 ESVRIWDVKTGKCLKTL--PAHSDPVSAVHF--NRDGSLIVSSSYDGLCRIWDTASGQCL 206
Query: 186 KINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSP 244
K ++ V SP+G + D LWD + GK L T H + C
Sbjct: 207 KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKN--EKYCIFA 264
Query: 245 NRSFQKIKLDISRTLQKSNLI-LYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSS-- 301
N S K +S + + NL+ ++ + ++ V+S A I S++
Sbjct: 265 NFSVTGGKWIVSGS--EDNLVYIWNLQTKEVVQKLQGHTDVVISTACHPTENIIASAALE 322
Query: 302 RDKTIKLWNT 311
DKTIKLW +
Sbjct: 323 NDKTIKLWKS 332
Score = 106 (42.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 34/130 (26%), Positives = 63/130 (48%)
Query: 182 NCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDI-ITAL 240
N LK +GHT +++V SP+G AS D +W DGK T+ + + I+ +
Sbjct: 34 NYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 93
Query: 241 CFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSS 300
+S + + L +S + K+ L ++ ++ GK V F+ + IVS
Sbjct: 94 AWSSDSN-----LLVSASDDKT-LKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 147
Query: 301 SRDKTIKLWN 310
S D+++++W+
Sbjct: 148 SFDESVRIWD 157
Score = 54 (24.1 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 343 DPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVS 374
+PP+ + +S +G+ + A DNT+++W S
Sbjct: 214 NPPVSF-VKFSPNGKYILAATLDNTLKLWDYS 244
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 91/310 (29%), Positives = 148/310 (47%)
Query: 8 LRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFI 67
L+ TL GH V+ + +P + + S S D + IW D + +K + GH I
Sbjct: 37 LKFTLAGHTKAVSSVKFSPN-GEWLASSSADKLIKIWGAY--DGKF---EKTISGHKLGI 90
Query: 68 SDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRD 127
SD+ SSD N +S S DKTL++WD+++GK + + H+ V F+ + IVS S D
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 150
Query: 128 KTIKLWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCK-L 185
+++++W+ C T+ HSD VS V F N +IVS+ +D + ++W+ + + L
Sbjct: 151 ESVRIWDVKTGKCLKTL--PAHSDPVSAVHF--NRDGSLIVSSSYDGLCRIWDTASGQCL 206
Query: 186 KINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSP 244
K ++ V SP+G + D LWD + GK L T H + C
Sbjct: 207 KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKN--EKYCIFA 264
Query: 245 NRSFQKIKLDISRTLQKSNLI-LYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSS-- 301
N S K +S + + NL+ ++ + ++ V+S A I S++
Sbjct: 265 NFSVTGGKWIVSGS--EDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALE 322
Query: 302 RDKTIKLWNT 311
DKTIKLW +
Sbjct: 323 NDKTIKLWKS 332
Score = 106 (42.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 34/130 (26%), Positives = 63/130 (48%)
Query: 182 NCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDI-ITAL 240
N LK +GHT +++V SP+G AS D +W DGK T+ + + I+ +
Sbjct: 34 NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 93
Query: 241 CFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSS 300
+S + + L +S + K+ L ++ ++ GK V F+ + IVS
Sbjct: 94 AWSSDSN-----LLVSASDDKT-LKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 147
Query: 301 SRDKTIKLWN 310
S D+++++W+
Sbjct: 148 SFDESVRIWD 157
Score = 54 (24.1 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 343 DPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVS 374
+PP+ + +S +G+ + A DNT+++W S
Sbjct: 214 NPPVSF-VKFSPNGKYILAATLDNTLKLWDYS 244
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 91/310 (29%), Positives = 148/310 (47%)
Query: 8 LRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFI 67
L+ TL GH V+ + +P + + S S D + IW D + +K + GH I
Sbjct: 37 LKFTLAGHTKAVSSVKFSPN-GEWLASSSADKLIKIWGAY--DGKF---EKTISGHKLGI 90
Query: 68 SDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRD 127
SD+ SSD N +S S DKTL++WD+++GK + + H+ V F+ + IVS S D
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 150
Query: 128 KTIKLWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCK-L 185
+++++W+ C T+ HSD VS V F N +IVS+ +D + ++W+ + + L
Sbjct: 151 ESVRIWDVKTGKCLKTL--PAHSDPVSAVHF--NRDGSLIVSSSYDGLCRIWDTASGQCL 206
Query: 186 KINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSP 244
K ++ V SP+G + D LWD + GK L T H + C
Sbjct: 207 KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKN--EKYCIFA 264
Query: 245 NRSFQKIKLDISRTLQKSNLI-LYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSS-- 301
N S K +S + + NL+ ++ + ++ V+S A I S++
Sbjct: 265 NFSVTGGKWIVSGS--EDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALE 322
Query: 302 RDKTIKLWNT 311
DKTIKLW +
Sbjct: 323 NDKTIKLWKS 332
Score = 106 (42.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 34/130 (26%), Positives = 63/130 (48%)
Query: 182 NCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDI-ITAL 240
N LK +GHT +++V SP+G AS D +W DGK T+ + + I+ +
Sbjct: 34 NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 93
Query: 241 CFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSS 300
+S + + L +S + K+ L ++ ++ GK V F+ + IVS
Sbjct: 94 AWSSDSN-----LLVSASDDKT-LKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 147
Query: 301 SRDKTIKLWN 310
S D+++++W+
Sbjct: 148 SFDESVRIWD 157
Score = 54 (24.1 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 343 DPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVS 374
+PP+ + +S +G+ + A DNT+++W S
Sbjct: 214 NPPVSF-VKFSPNGKYILAATLDNTLKLWDYS 244
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 90/310 (29%), Positives = 147/310 (47%)
Query: 8 LRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFI 67
L+ TL GH V+ + +P + + S S D + IW D + +K + GH I
Sbjct: 64 LKFTLAGHTKAVSAVKFSPN-GEWLASSSADKLIKIWGAY--DGKF---EKTISGHKLGI 117
Query: 68 SDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRD 127
SD+ SSD +SGS DKTL++W+L+ GK+ + + H+ V F+ + IVS S D
Sbjct: 118 SDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 177
Query: 128 KTIKLWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCK-L 185
+++++W+ C T+ HSD VS V F N +IVS+ +D + ++W+ + + L
Sbjct: 178 ESVRIWDVRTGKCLKTL--PAHSDPVSAVHF--NRDGSLIVSSSYDGLCRIWDTASGQCL 233
Query: 186 KINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSP 244
K ++ V SP+G + D LWD + GK L T H + C
Sbjct: 234 KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKN--EKYCIFA 291
Query: 245 NRSFQKIKLDISRTLQKSNLI-LYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSS-- 301
N S K +S + + N++ ++ + ++ VL A I S++
Sbjct: 292 NFSVTGGKWIVSGS--EDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIASAALE 349
Query: 302 RDKTIKLWNT 311
DKTIKLW +
Sbjct: 350 NDKTIKLWKS 359
Score = 102 (41.0 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 34/130 (26%), Positives = 62/130 (47%)
Query: 182 NCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDI-ITAL 240
N LK +GHT ++ V SP+G AS D +W DGK T+ + + I+ +
Sbjct: 61 NYTLKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 120
Query: 241 CFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSS 300
+S + +L +S + K+ L ++ ++ GK V F+ + IVS
Sbjct: 121 AWSSDS-----RLLVSGSDDKT-LKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSG 174
Query: 301 SRDKTIKLWN 310
S D+++++W+
Sbjct: 175 SFDESVRIWD 184
Score = 54 (24.1 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 343 DPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVS 374
+PP+ + +S +G+ + A DNT+++W S
Sbjct: 241 NPPVSF-VKFSPNGKYILAATLDNTLKLWDYS 271
>ASPGD|ASPL0000046644 [details] [associations]
symbol:AN2021 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACD01000032 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR007111 PROSITE:PS50837 RefSeq:XP_659625.1
ProteinModelPortal:Q5BBQ9 EnsemblFungi:CADANIAT00008689
GeneID:2875333 KEGG:ani:AN2021.2 OMA:KQVLKGH OrthoDB:EOG412QDH
Uniprot:Q5BBQ9
Length = 1311
Score = 299 (110.3 bits), Expect = 4.1e-25, P = 4.1e-25
Identities = 89/276 (32%), Positives = 133/276 (48%)
Query: 36 SRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAA 95
SRD+T I+ DT G QK LKGHSH S + SSD ++GS D T+RLW+
Sbjct: 750 SRDSTCIMLF----DTATGDLQKILKGHSHECSTMAFSSDSRQLVTGSVDCTVRLWNTTT 805
Query: 96 GKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCV 155
G + F HT VLSVA S D RQIVS S + +KLW+ + G + V
Sbjct: 806 GDLEKTFVGHTGTVLSVAISSDGRQIVSGSIE-AVKLWDAATGDLLKTLASG---FAGSV 861
Query: 156 RFSPNHQNPIIVSAGW-DRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKD 214
FSP+ + ++AG+ D + +W+ L+ H G + ++ SPD + D
Sbjct: 862 AFSPDSRQ---IAAGFKDGKIFIWDAAGT-LQKTLERHPGAIMSIAFSPDVKQLVTCSTD 917
Query: 215 MNAMLWDLNDGKHLHTLVHNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKM 274
WD+ G + H+ +T + SP+ K+ S + K+ + L+ G +
Sbjct: 918 STIKRWDITIGGVQEAVGHSKHVTTMVLSPDG-----KVIASGSADKT-IKLWDAATGDL 971
Query: 275 ETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWN 310
+ V V FS+DNRQIVS S + +K+W+
Sbjct: 972 QKTLTGHLDTVEKVVFSLDNRQIVSCSSE-AVKIWD 1006
Score = 290 (107.1 bits), Expect = 3.8e-24, P = 3.8e-24
Identities = 108/391 (27%), Positives = 176/391 (45%)
Query: 2 STETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLK 61
+T T L T GH G V +A + I+S S + + +W D G K L
Sbjct: 802 NTTTGDLEKTFVGHTGTVLSVAISSDGRQ-IVSGSIE-AVKLW-----DAATGDLLKTLA 854
Query: 62 GHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 121
S F + S D +G D + +WD AAG + E H ++S+AFS D +Q+
Sbjct: 855 --SGFAGSVAFSPDSRQIAAGFKDGKIFIWD-AAGTLQKTLERHPGAIMSIAFSPDVKQL 911
Query: 122 VSSSRDKTIKLWN-TLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL 180
V+ S D TIK W+ T+ + + GHS V+ + SP+ + +I S D+ +K+W+
Sbjct: 912 VTCSTDSTIKRWDITIGGVQEAV---GHSKHVTTMVLSPDGK--VIASGSADKTIKLWDA 966
Query: 181 TNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITAL 240
L+ +GH + V S D S + +WD GK ++ +D+ T +
Sbjct: 967 ATGDLQKTLTGHLDTVEKVVFSLDNRQIVSCSSEA-VKIWDAATGKVQNSFESDDVFTIV 1025
Query: 241 CFSPNRSF-------QKIKL-DISRTLQKSNLILYPINHGKM-ETPFF------SLFR-D 284
SP+ +IKL D++ + Y + T F ++F
Sbjct: 1026 AVSPDGKHIASGHCNGRIKLWDMATGSLLKTMAGYRSKFDSLVTTEVFDIQLQEAIFNTQ 1085
Query: 285 VLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMV--EELRPDVVSQSTKA 342
+ + FS D + I+S+S D+ IKLW+ DL+ + + + D S+S+
Sbjct: 1086 ITGLVFSPDAKLILSTSTDRAIKLWDAATG------DLQKRLPCHSDSIITDAFSRSS-G 1138
Query: 343 DPPMCLSLAWSTDGQTLFAGYSDNTIRVWQV 373
P S+A+S+DGQ + A +D TIRVW +
Sbjct: 1139 YPNWIFSVAFSSDGQHIAAASADKTIRVWSI 1169
Score = 272 (100.8 bits), Expect = 3.4e-21, P = 3.4e-21
Identities = 91/331 (27%), Positives = 152/331 (45%)
Query: 50 DTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 109
+T G +K GH+ + + +SSDG +SGS + ++LWD A G +
Sbjct: 802 NTTTGDLEKTFVGHTGTVLSVAISSDGRQIVSGSIE-AVKLWDAATGDLLKTLASGFAG- 859
Query: 110 LSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSA 169
SVAFS D+RQI + +D I +W+ + T+ + H + + FSP+ + +V+
Sbjct: 860 -SVAFSPDSRQIAAGFKDGKIFIWDAAGTLQKTL--ERHPGAIMSIAFSPDVKQ--LVTC 914
Query: 170 GWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLH 229
D +K W++T ++ GH+ ++ T+ +SPDG + ASG D LWD G
Sbjct: 915 STDSTIKRWDITIGGVQ-EAVGHSKHVTTMVLSPDGKVIASGSADKTIKLWDAATGDLQK 973
Query: 230 TLV-HNDIITALCFS-PNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLS 287
TL H D + + FS NR + S K ++ GK++ F S DV +
Sbjct: 974 TLTGHLDTVEKVVFSLDNRQI----VSCSSEAVK----IWDAATGKVQNSFES--DDVFT 1023
Query: 288 -VAFSVDNRQIVSSSRDKTIKLWNTLAHCKF-TIVDLETK--KMVEELRPDVVSQSTKAD 343
VA S D + I S + IKLW+ T+ +K +V D+ Q +
Sbjct: 1024 IVAVSPDGKHIASGHCNGRIKLWDMATGSLLKTMAGYRSKFDSLVTTEVFDIQLQEAIFN 1083
Query: 344 PPMCLSLAWSTDGQTLFAGYSDNTIRVWQVS 374
+ L +S D + + + +D I++W +
Sbjct: 1084 TQIT-GLVFSPDAKLILSTSTDRAIKLWDAA 1113
Score = 195 (73.7 bits), Expect = 2.9e-15, Sum P(2) = 2.9e-15
Identities = 86/319 (26%), Positives = 145/319 (45%)
Query: 79 ALSGSWDKT-LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA 137
A S D T + L+D A G + + H+ + ++AFS D+RQ+V+ S D T++LWNT
Sbjct: 746 AFGWSRDSTCIMLFDTATGDLQKILKGHSHECSTMAFSSDSRQLVTGSVDCTVRLWNTTT 805
Query: 138 -HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL-TNCKLKINHSGHTGY 195
+ T V GH+ V V S + + IVS G VK+W+ T LK SG G
Sbjct: 806 GDLEKTFV--GHTGTVLSVAISSDGRQ--IVS-GSIEAVKLWDAATGDLLKTLASGFAG- 859
Query: 196 LNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLD 254
+V SPD A+G KD +WD G TL H I ++ FSP+ Q +
Sbjct: 860 --SVAFSPDSRQIAAGFKDGKIFIWDAA-GTLQKTLERHPGAIMSIAFSPDVK-QLVTCS 915
Query: 255 ISRTLQKSNLIL----YPINHGKMETPFFSLFRDVLSVAFSVDNRQIV---SSSRDKTIK 307
T+++ ++ + + H K T L D +A ++ I +++ D
Sbjct: 916 TDSTIKRWDITIGGVQEAVGHSKHVTTMV-LSPDGKVIASGSADKTIKLWDAATGDLQKT 974
Query: 308 LWNTLAHCKFTIVDLETKKMVE---------ELRPDVVSQSTKADPPMCLSLAWSTDGQT 358
L L + + L+ +++V + V S ++D + +A S DG+
Sbjct: 975 LTGHLDTVEKVVFSLDNRQIVSCSSEAVKIWDAATGKVQNSFESDDVFTI-VAVSPDGKH 1033
Query: 359 LFAGYSDNTIRVWQVSVTS 377
+ +G+ + I++W ++ S
Sbjct: 1034 IASGHCNGRIKLWDMATGS 1052
Score = 78 (32.5 bits), Expect = 2.9e-15, Sum P(2) = 2.9e-15
Identities = 26/99 (26%), Positives = 42/99 (42%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDD---TNYGV-PQKRLKGHSHF 66
TL GH+ V ++A +P I S S + +W T T G P++R +
Sbjct: 615 TLTGHSEAVWRVAFSPDGKQ-IASGSDSGLIKLWDTTTGSLQKTLSGSHPKRRYQIQQEQ 673
Query: 67 ISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 105
+ + D +SG +D ++ LWD G + DH
Sbjct: 674 VKAMAFLPDSKLIISGYYDGSVMLWDTTTGDR-QEIADH 711
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 92/312 (29%), Positives = 151/312 (48%)
Query: 8 LRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFI 67
LR TL GH+ ++ + +P + + S + D +IIW D N +K L GHS I
Sbjct: 31 LRLTLAGHSAAISSVKFSPN-GEWLASSAADALIIIWGAY--DGNC---KKTLYGHSLEI 84
Query: 68 SDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRD 127
SD+ SSD + +S S DKTL++WD+ +GK + + H+ V F+ + IVS S D
Sbjct: 85 SDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFD 144
Query: 128 KTIKLWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTN--CK 184
+++K+W C T+ HSD +S V F+ N +IVS +D + ++W+ + C
Sbjct: 145 ESVKIWEVKTGKCLKTL--SAHSDPISAVNFNCN--GSLIVSGSYDGLCRIWDAASGQCL 200
Query: 185 LKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFS 243
+ G+ ++ V SP+G + D LWD + G+ L T H + C
Sbjct: 201 RTLADEGNPP-VSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKN--EKYCLF 257
Query: 244 PNRSFQKIKLDISRTLQKSNLILYPINHGKME-TPFFSLFRDVLSVAFSVDNRQIVSSS- 301
+ S K +S + + N++ Y N E DV+ A + I++S+
Sbjct: 258 ASFSVTGRKWVVSGS--EDNMV-YIWNLQTKEIVQRLQGHTDVVISAACHPTKNIIASAA 314
Query: 302 --RDKTIKLWNT 311
DKTIK+W++
Sbjct: 315 LENDKTIKVWSS 326
Score = 103 (41.3 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 33/129 (25%), Positives = 61/129 (47%)
Query: 182 NCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITAL 240
N L++ +GH+ +++V SP+G AS D ++W DG TL H+ I+ +
Sbjct: 28 NYALRLTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDV 87
Query: 241 CFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSS 300
+S + S + + +TL+ ++ + GK V F+ + IVS
Sbjct: 88 AWSSDSS-RLVSASDDKTLK-----VWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSG 141
Query: 301 SRDKTIKLW 309
S D+++K+W
Sbjct: 142 SFDESVKIW 150
Score = 51 (23.0 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 9/34 (26%), Positives = 20/34 (58%)
Query: 341 KADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVS 374
+ +PP+ + +S +G+ + DNT+++W S
Sbjct: 206 EGNPPVSF-VKFSPNGKYILTATLDNTLKLWDYS 238
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 249 (92.7 bits), Expect = 7.3e-25, Sum P(2) = 7.3e-25
Identities = 67/212 (31%), Positives = 102/212 (48%)
Query: 12 LNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV 71
L+GH V + NP I S S D + +W++ D N+ V LKGH + I D+
Sbjct: 49 LSGHPSAVYTMKFNPA-GTLIASGSHDREIFLWRVHGDCKNFMV----LKGHKNAILDLH 103
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ-IVSSSRDKTI 130
+SDG+ +S S DKT+R WD+ GK ++ +H+ V S + I+S S D T
Sbjct: 104 WTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTA 163
Query: 131 KLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS 190
KLW+ D + ++ V FS I + G D VKVW+L + +
Sbjct: 164 KLWDMRQRGAIQTFPDKYQ--ITAVSFSDAADK--IFTGGVDNDVKVWDLRKGEATMTLE 219
Query: 191 GHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
GH + +++SPDGS + G D +WD+
Sbjct: 220 GHQDTITGMSLSPDGSYLLTNGMDNKLCVWDM 251
Score = 205 (77.2 bits), Expect = 2.5e-17, Sum P(2) = 2.5e-17
Identities = 68/263 (25%), Positives = 121/263 (46%)
Query: 56 PQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAF 114
P L GH + + + G SGS D+ + LW + K + H +L + +
Sbjct: 45 PIMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHW 104
Query: 115 SVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWV-SCVRFSPNHQNP-IIVSAGWD 172
+ D QIVS+S DKT++ W+ + + + HS +V SC P + P +I+S D
Sbjct: 105 TSDGSQIVSASPDKTVRAWDVETGKQIKKMAE-HSSFVNSCC---PTRRGPPLIISGSDD 160
Query: 173 RMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV 232
K+W++ + I + V+ S +GG D + +WDL G+ TL
Sbjct: 161 GTAKLWDMRQ-RGAIQTFPDKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLE 219
Query: 233 -HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILY-PINHG-KM-ETPFFSLFRDVLSV 288
H D IT + SP+ S+ + + L ++ Y P N K+ E + +++L
Sbjct: 220 GHQDTITGMSLSPDGSYL-LTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKC 278
Query: 289 AFSVDNRQIVSSSRDKTIKLWNT 311
++S D ++ + S D+ + +W+T
Sbjct: 279 SWSPDGTKVTAGSSDRMVHIWDT 301
Score = 179 (68.1 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 61/244 (25%), Positives = 105/244 (43%)
Query: 12 LNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV 71
L GH + + I+S S D T+ W D G K++ HS F++
Sbjct: 92 LKGHKNAILDLHWTSD-GSQIVSASPDKTVRAW-----DVETGKQIKKMAEHSSFVNSCC 145
Query: 72 LSSDGN-YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 130
+ G +SGS D T +LWD+ + F D + + +V+FS +I + D +
Sbjct: 146 PTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDAADKIFTGGVDNDV 204
Query: 131 KLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL------TNC- 183
K+W+ L + T+ +GH D ++ + SP+ +++ G D + VW++ C
Sbjct: 205 KVWD-LRKGEATMTLEGHQDTITGMSLSPD--GSYLLTNGMDNKLCVWDMRPYAPQNRCV 261
Query: 184 KLKINHSGHTGYLNTVTVS--PDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITAL 240
K+ H H N + S PDG+ +G D +WD + ++ L H +
Sbjct: 262 KIFEGHQ-HNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNEC 320
Query: 241 CFSP 244
F P
Sbjct: 321 VFHP 324
Score = 167 (63.8 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 50/217 (23%), Positives = 93/217 (42%)
Query: 15 HNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSS 74
H+ +V + P I+S S D T +W + + P K + I+ + S
Sbjct: 137 HSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDK------YQITAVSFSD 190
Query: 75 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 134
+ +G D +++WDL G+ T E H + ++ S D ++++ D + +W+
Sbjct: 191 AADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWD 250
Query: 135 TLAHC---KFTIVEDGHS-----DWVSCVRFSPNHQNPIIVSAGW-DRMVKVWNLTNCKL 185
+ + + +GH + + C +SP+ V+AG DRMV +W+ T+ +
Sbjct: 251 MRPYAPQNRCVKIFEGHQHNFEKNLLKC-SWSPDGTK---VTAGSSDRMVHIWDTTSRRT 306
Query: 186 KINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
GHTG +N P + S D N L ++
Sbjct: 307 IYKLPGHTGSVNECVFHPTEPIIGSCSSDKNIYLGEI 343
Score = 124 (48.7 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 40/130 (30%), Positives = 56/130 (43%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKR----LKGHSHF 66
TL GH +T ++ +P +L+ DN L +W D Y PQ R +GH H
Sbjct: 217 TLEGHQDTITGMSLSPD-GSYLLTNGMDNKLCVW----DMRPYA-PQNRCVKIFEGHQHN 270
Query: 67 ISDIVL----SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 122
+L S DG +GS D+ + +WD + +T + HT V F I
Sbjct: 271 FEKNLLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIG 330
Query: 123 SSSRDKTIKL 132
S S DK I L
Sbjct: 331 SCSSDKNIYL 340
Score = 64 (27.6 bits), Expect = 7.3e-25, Sum P(2) = 7.3e-25
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 348 LSLAWSTDGQTLFAGYSDNTIRVWQVSVTSR 378
L +WS DG + AG SD + +W TSR
Sbjct: 276 LKCSWSPDGTKVTAGSSDRMVHIWDT--TSR 304
>UNIPROTKB|Q229Z6 [details] [associations]
symbol:TTHERM_01308010 "POC1 centriolar protein homolog"
species:312017 "Tetrahymena thermophila SB210" [GO:0005932
"microtubule basal body" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GO:GO:0030030 KO:K16482 EMBL:GG662475 RefSeq:XP_001029778.1
UniGene:Tth.7377 ProteinModelPortal:Q229Z6 EnsemblProtists:EAR82115
GeneID:7835570 KEGG:tet:TTHERM_01308010 ProtClustDB:CLSZ2449456
Uniprot:Q229Z6
Length = 634
Score = 289 (106.8 bits), Expect = 1.3e-24, P = 1.3e-24
Identities = 77/250 (30%), Positives = 123/250 (49%)
Query: 14 GHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLS 73
GH G V + +P +TI SC +D + +W+ T + + +K H I + S
Sbjct: 87 GHKGAVYCVKYSPD-GETIASCGQDRQIRLWQNTVQ-SKCSI----IKAHCGAIRSMSFS 140
Query: 74 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLW 133
+DG Y LS S DKTL+LW L K F H V S S D R + S S DKT+ LW
Sbjct: 141 ADGGYLLSSSDDKTLKLWRLQDKKFMCSFAGHKNWVRSGVISPDMRLVASGSDDKTVMLW 200
Query: 134 NTLAH---CKFTIVEDG-----------HSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
+ K++ ++D H D VS V F P+ ++S+ +D +K+ +
Sbjct: 201 DLNFQKIVSKYSTLDDNVKISQINSYSDHMDTVSQVLFHPD--GTCLISSSFDHKIKITD 258
Query: 180 LTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDI-IT 238
+ + KL +++ H +N++++ P G AS G D +WDL G+ ++TL ND IT
Sbjct: 259 IRSNKLIQHYNAHDAQVNSISIHPTGYFLASAGSDSKIKIWDLRQGRQIYTLYSNDKDIT 318
Query: 239 ALCFSPNRSF 248
+ F+ + +
Sbjct: 319 TVQFNQSGDY 328
Score = 207 (77.9 bits), Expect = 9.0e-14, P = 9.0e-14
Identities = 50/180 (27%), Positives = 82/180 (45%)
Query: 45 KLTRDDTNYGVPQKR-LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFE 103
K+T T + R +GH I+ S S D + +W+ + +F
Sbjct: 27 KITEQQTTHDPALSRSFRGHEDIITCADFDPKMRQVASCSKDSIVYVWNFKPQQRPFKFV 86
Query: 104 DHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQN 163
H V V +S D I S +D+ I+LW K +I++ H + + FS +
Sbjct: 87 GHKGAVYCVKYSPDGETIASCGQDRQIRLWQNTVQSKCSIIK-AHCGAIRSMSFSAD--G 143
Query: 164 PIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLN 223
++S+ D+ +K+W L + K + +GH ++ + +SPD L ASG D MLWDLN
Sbjct: 144 GYLLSSSDDKTLKLWRLQDKKFMCSFAGHKNWVRSGVISPDMRLVASGSDDKTVMLWDLN 203
Score = 199 (75.1 bits), Expect = 7.2e-13, P = 7.2e-13
Identities = 75/284 (26%), Positives = 132/284 (46%)
Query: 99 TRRFEDHTKDVLSVA-FSVDNRQIVSSSRDKTIKLWNTLAHCK-FTIVEDGHSDWVSCVR 156
+R F H +D+++ A F RQ+ S S+D + +WN + F V GH V CV+
Sbjct: 40 SRSFRGH-EDIITCADFDPKMRQVASCSKDSIVYVWNFKPQQRPFKFV--GHKGAVYCVK 96
Query: 157 FSPNHQNPIIVSAGWDRMVKVW-NLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDM 215
+SP+ + I S G DR +++W N K I + H G + +++ S DG S D
Sbjct: 97 YSPDGET--IASCGQDRQIRLWQNTVQSKCSIIKA-HCGAIRSMSFSADGGYLLSSSDDK 153
Query: 216 NAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKM 274
LW L D K + + H + + + SP+ ++L S + K+ ++L+ +N K+
Sbjct: 154 TLKLWRLQDKKFMCSFAGHKNWVRSGVISPD-----MRLVASGSDDKT-VMLWDLNFQKI 207
Query: 275 ETPFFSLFRDV-LSVAFSV-DNRQIVSS---SRDKTIKLWNTLAHCKFTIVDLETKKMVE 329
+ + +L +V +S S D+ VS D T + ++ H K I D+ + K++
Sbjct: 208 VSKYSTLDDNVKISQINSYSDHMDTVSQVLFHPDGTCLISSSFDH-KIKITDIRSNKLI- 265
Query: 330 ELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQV 373
Q A S++ G L + SD+ I++W +
Sbjct: 266 --------QHYNAHDAQVNSISIHPTGYFLASAGSDSKIKIWDL 301
Score = 172 (65.6 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 57/215 (26%), Positives = 91/215 (42%)
Query: 32 ILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLW 91
+LS S D TL +W+L D + GH +++ V+S D SGS DKT+ LW
Sbjct: 146 LLSSSDDKTLKLWRL--QDKKF---MCSFAGHKNWVRSGVISPDMRLVASGSDDKTVMLW 200
Query: 92 DLAAGKTTRRFE---------------DHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTL 136
DL K ++ DH V V F D ++SSS D IK+ +
Sbjct: 201 DLNFQKIVSKYSTLDDNVKISQINSYSDHMDTVSQVLFHPDGTCLISSSFDHKIKITDIR 260
Query: 137 AHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYL 196
++ K + H V+ + P + SAG D +K+W+L + + +
Sbjct: 261 SN-KLIQHYNAHDAQVNSISIHPTGY--FLASAGSDSKIKIWDLRQGRQIYTLYSNDKDI 317
Query: 197 NTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTL 231
TV + G A+GG M+W N +++ +
Sbjct: 318 TTVQFNQSGDYFATGGSQNLCMVWKTNFDQNIQNI 352
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 80/257 (31%), Positives = 132/257 (51%)
Query: 60 LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 119
L+GH+ IS S G Y + S DKT+++W++ R H V +A+S D+R
Sbjct: 83 LEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSR 142
Query: 120 QIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
+VS+S DKT+K++ + + T GH+++V C F+P Q+ ++VS +D V++W+
Sbjct: 143 CVVSASDDKTLKIFEIVTS-RMTKTLKGHNNYVFCCNFNP--QSSLVVSGSFDESVRIWD 199
Query: 180 L-TNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV--HNDI 236
+ T +K H+ ++ V+ + DGSL ASG D +WD +G+ + TLV N
Sbjct: 200 VKTGMCIK-TLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPP 258
Query: 237 ITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPF--FSLFRDVLSVAFSVDN 294
+ + FSPN K ++ L S L L+ + GK + + + FSV
Sbjct: 259 VAFVKFSPNG-----KYILASNLD-STLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTG 312
Query: 295 -RQIVSSSRDKTIKLWN 310
+ I+S S D I +WN
Sbjct: 313 GKWIISGSEDCKIYIWN 329
Score = 237 (88.5 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 64/226 (28%), Positives = 109/226 (48%)
Query: 7 QLRGTLNGHNGWVTQIATNP--KFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHS 64
+L TL GH ++ +P K+ T S D T+ IW + ++ + ++ L GH
Sbjct: 78 KLMCTLEGHTKSISSAKFSPCGKYLGT---SSADKTVKIWNM-----DHMICERTLTGHK 129
Query: 65 HFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSS 124
++DI SSD +S S DKTL+++++ + T+ + H V F+ + +VS
Sbjct: 130 LGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSG 189
Query: 125 SRDKTIKLWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNC 183
S D+++++W+ C T+ HSD VS V F N +I S +D +V++W+ N
Sbjct: 190 SFDESVRIWDVKTGMCIKTL--PAHSDPVSAVSF--NRDGSLIASGSYDGLVRIWDTANG 245
Query: 184 K-LKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHL 228
+ +K + V SP+G + D LWD + GK L
Sbjct: 246 QCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTL 291
Score = 233 (87.1 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 62/216 (28%), Positives = 108/216 (50%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
TL GH V IA + ++S S D TL I+++ K LKGH++++
Sbjct: 124 TLTGHKLGVNDIAWSSD-SRCVVSASDDKTLKIFEIVTSRMT-----KTLKGHNNYVFCC 177
Query: 71 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 130
+ + +SGS+D+++R+WD+ G + H+ V +V+F+ D I S S D +
Sbjct: 178 NFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLV 237
Query: 131 KLWNTL-AHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINH 189
++W+T C T+V+D + V+ V+FSPN + I+++ D +K+W+ + K +
Sbjct: 238 RIWDTANGQCIKTLVDDENPP-VAFVKFSPNGK--YILASNLDSTLKLWDFSKGKTLKQY 294
Query: 190 SGHTG--YLNTVTVS-PDGSLCASGGKDMNAMLWDL 222
+GH Y S G SG +D +W+L
Sbjct: 295 TGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNL 330
Score = 214 (80.4 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 65/221 (29%), Positives = 103/221 (46%)
Query: 5 TLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHS 64
T ++ TL GHN +V NP+ ++S S D ++ IW D G+ K L HS
Sbjct: 160 TSRMTKTLKGHNNYVFCCNFNPQ-SSLVVSGSFDESVRIW-----DVKTGMCIKTLPAHS 213
Query: 65 HFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF-EDHTKDVLSVAFSVDNRQIVS 123
+S + + DG+ SGS+D +R+WD A G+ + +D V V FS + + I++
Sbjct: 214 DPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILA 273
Query: 124 SSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCV--RFSPNHQNPIIVSAGWDRMVKVWNLT 181
S+ D T+KLW+ + K GH + C+ FS I+S D + +WNL
Sbjct: 274 SNLDSTLKLWD-FSKGKTLKQYTGHENSKYCIFANFSVTG-GKWIISGSEDCKIYIWNLQ 331
Query: 182 NCKLKINHSGHTGYLNTVTVSPDGSLCASGG--KDMNAMLW 220
++ GHT + P ++ ASG D +W
Sbjct: 332 TREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIW 372
Score = 142 (55.0 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 46/189 (24%), Positives = 87/189 (46%)
Query: 137 AHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYL 196
A+ K +GH+ +S +FSP + + ++ D+ VK+WN+ + + +GH +
Sbjct: 75 ANYKLMCTLEGHTKSISSAKFSPCGK--YLGTSSADKTVKIWNMDHMICERTLTGHKLGV 132
Query: 197 NTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDI 255
N + S D S D ++++ + TL HN+ + F+P S L +
Sbjct: 133 NDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSS-----LVV 187
Query: 256 SRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTL-AH 314
S + +S + ++ + G + V +V+F+ D I S S D +++W+T
Sbjct: 188 SGSFDES-VRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQ 246
Query: 315 CKFTIVDLE 323
C T+VD E
Sbjct: 247 CIKTLVDDE 255
Score = 50 (22.7 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 9/32 (28%), Positives = 20/32 (62%)
Query: 343 DPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVS 374
+PP+ + +S +G+ + A D+T+++W S
Sbjct: 256 NPPVAF-VKFSPNGKYILASNLDSTLKLWDFS 286
Score = 37 (18.1 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 347 CLSLAWS-TDGQTLFAGYSDNTIRVWQV 373
C+ +S T G+ + +G D I +W +
Sbjct: 303 CIFANFSVTGGKWIISGSEDCKIYIWNL 330
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 80/257 (31%), Positives = 132/257 (51%)
Query: 60 LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 119
L+GH+ IS S G Y + S DKT+++W++ R H V +A+S D+R
Sbjct: 83 LEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSR 142
Query: 120 QIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
+VS+S DKT+K++ + + T GH+++V C F+P Q+ ++VS +D V++W+
Sbjct: 143 CVVSASDDKTLKIFEIVTS-RMTKTLKGHNNYVFCCNFNP--QSSLVVSGSFDESVRIWD 199
Query: 180 L-TNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV--HNDI 236
+ T +K H+ ++ V+ + DGSL ASG D +WD +G+ + TLV N
Sbjct: 200 VKTGMCIK-TLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPP 258
Query: 237 ITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPF--FSLFRDVLSVAFSVDN 294
+ + FSPN K ++ L S L L+ + GK + + + FSV
Sbjct: 259 VAFVKFSPNG-----KYILASNLD-STLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTG 312
Query: 295 -RQIVSSSRDKTIKLWN 310
+ I+S S D I +WN
Sbjct: 313 GKWIISGSEDCKIYIWN 329
Score = 237 (88.5 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 64/226 (28%), Positives = 109/226 (48%)
Query: 7 QLRGTLNGHNGWVTQIATNP--KFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHS 64
+L TL GH ++ +P K+ T S D T+ IW + ++ + ++ L GH
Sbjct: 78 KLMCTLEGHTKSISSAKFSPCGKYLGT---SSADKTVKIWNM-----DHMICERTLTGHK 129
Query: 65 HFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSS 124
++DI SSD +S S DKTL+++++ + T+ + H V F+ + +VS
Sbjct: 130 LGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSG 189
Query: 125 SRDKTIKLWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNC 183
S D+++++W+ C T+ HSD VS V F N +I S +D +V++W+ N
Sbjct: 190 SFDESVRIWDVKTGMCIKTL--PAHSDPVSAVSF--NRDGSLIASGSYDGLVRIWDTANG 245
Query: 184 K-LKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHL 228
+ +K + V SP+G + D LWD + GK L
Sbjct: 246 QCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTL 291
Score = 233 (87.1 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 62/216 (28%), Positives = 108/216 (50%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
TL GH V IA + ++S S D TL I+++ K LKGH++++
Sbjct: 124 TLTGHKLGVNDIAWSSD-SRCVVSASDDKTLKIFEIVTSRMT-----KTLKGHNNYVFCC 177
Query: 71 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 130
+ + +SGS+D+++R+WD+ G + H+ V +V+F+ D I S S D +
Sbjct: 178 NFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLV 237
Query: 131 KLWNTL-AHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINH 189
++W+T C T+V+D + V+ V+FSPN + I+++ D +K+W+ + K +
Sbjct: 238 RIWDTANGQCIKTLVDDENPP-VAFVKFSPNGK--YILASNLDSTLKLWDFSKGKTLKQY 294
Query: 190 SGHTG--YLNTVTVS-PDGSLCASGGKDMNAMLWDL 222
+GH Y S G SG +D +W+L
Sbjct: 295 TGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNL 330
Score = 214 (80.4 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 65/221 (29%), Positives = 103/221 (46%)
Query: 5 TLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHS 64
T ++ TL GHN +V NP+ ++S S D ++ IW D G+ K L HS
Sbjct: 160 TSRMTKTLKGHNNYVFCCNFNPQ-SSLVVSGSFDESVRIW-----DVKTGMCIKTLPAHS 213
Query: 65 HFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF-EDHTKDVLSVAFSVDNRQIVS 123
+S + + DG+ SGS+D +R+WD A G+ + +D V V FS + + I++
Sbjct: 214 DPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILA 273
Query: 124 SSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCV--RFSPNHQNPIIVSAGWDRMVKVWNLT 181
S+ D T+KLW+ + K GH + C+ FS I+S D + +WNL
Sbjct: 274 SNLDSTLKLWD-FSKGKTLKQYTGHENSKYCIFANFSVTG-GKWIISGSEDCKIYIWNLQ 331
Query: 182 NCKLKINHSGHTGYLNTVTVSPDGSLCASGG--KDMNAMLW 220
++ GHT + P ++ ASG D +W
Sbjct: 332 TREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIW 372
Score = 142 (55.0 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 46/189 (24%), Positives = 87/189 (46%)
Query: 137 AHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYL 196
A+ K +GH+ +S +FSP + + ++ D+ VK+WN+ + + +GH +
Sbjct: 75 ANYKLMCTLEGHTKSISSAKFSPCGK--YLGTSSADKTVKIWNMDHMICERTLTGHKLGV 132
Query: 197 NTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDI 255
N + S D S D ++++ + TL HN+ + F+P S L +
Sbjct: 133 NDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSS-----LVV 187
Query: 256 SRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTL-AH 314
S + +S + ++ + G + V +V+F+ D I S S D +++W+T
Sbjct: 188 SGSFDES-VRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQ 246
Query: 315 CKFTIVDLE 323
C T+VD E
Sbjct: 247 CIKTLVDDE 255
Score = 50 (22.7 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 9/32 (28%), Positives = 20/32 (62%)
Query: 343 DPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVS 374
+PP+ + +S +G+ + A D+T+++W S
Sbjct: 256 NPPVAF-VKFSPNGKYILASNLDSTLKLWDFS 286
Score = 37 (18.1 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 347 CLSLAWS-TDGQTLFAGYSDNTIRVWQV 373
C+ +S T G+ + +G D I +W +
Sbjct: 303 CIFANFSVTGGKWIISGSEDCKIYIWNL 330
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 266 (98.7 bits), Expect = 3.1e-24, Sum P(2) = 3.1e-24
Identities = 78/301 (25%), Positives = 134/301 (44%)
Query: 12 LNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV 71
L H +T +A N K ++ S D T +W DT G L+GH + + I
Sbjct: 88 LRAHILPLTNVALN-KAGSCFITGSYDRTCKVW-----DTASGEELHTLEGHRNVVYAIA 141
Query: 72 LSSD-GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 130
++ G+ +GS+DKT +LW GK F HT +++ ++F+ + + + S D T
Sbjct: 142 FNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTA 201
Query: 131 KLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS 190
KLW+ + + + GH + + F + I++ +D V VW+ + +
Sbjct: 202 KLWD-IQSGEEVVTLTGHLAEIISLSFDTSGDR--IITGSFDHTVVVWDASTGRKVHTLI 258
Query: 191 GHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQ 249
GH +++ S D SL +G D MLWD GK + TL H+D I CF
Sbjct: 259 GHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTG--- 315
Query: 250 KIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLW 309
KL I+ +Y K T ++ ++F+ ++++ S DKT ++W
Sbjct: 316 --KL-IATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIW 372
Query: 310 N 310
+
Sbjct: 373 D 373
Score = 264 (98.0 bits), Expect = 7.4e-24, Sum P(2) = 7.4e-24
Identities = 67/262 (25%), Positives = 132/262 (50%)
Query: 58 KRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 117
K L+ H ++++ L+ G+ ++GS+D+T ++WD A+G+ E H V ++AF+
Sbjct: 86 KVLRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNP 145
Query: 118 -NRQIVSSSRDKTIKLWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMV 175
+I + S DKT KLW+ C T GH+ + C+ F+P Q+ ++ + D
Sbjct: 146 YGDKIATGSFDKTCKLWSAETGKCYHTF--RGHTAEIVCLSFNP--QSTVVATGSMDTTA 201
Query: 176 KVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HN 234
K+W++ + + + +GH + +++ G +G D ++WD + G+ +HTL+ H
Sbjct: 202 KLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHC 261
Query: 235 DIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDN 294
I++ FS + S L ++ ++ K+ +L+ GK ++L F
Sbjct: 262 AEISSALFSWDCS-----LILTGSMDKT-CMLWDATSGKCVATLTGHDDEILDSCFDYTG 315
Query: 295 RQIVSSSRDKTIKLWN-TLAHC 315
+ I ++S D T +++N T C
Sbjct: 316 KLIATASADGTARVYNATTRKC 337
Score = 262 (97.3 bits), Expect = 6.5e-23, Sum P(2) = 6.5e-23
Identities = 71/247 (28%), Positives = 115/247 (46%)
Query: 2 STETLQLRGTLNGHNGWVTQIATNPKFPDTILSC-SRDNTLIIWKLTRDDTNYGVPQKRL 60
S ET + T GH + ++ NP+ T+++ S D T +W D G L
Sbjct: 163 SAETGKCYHTFRGHTAEIVCLSFNPQ--STVVATGSMDTTAKLW-----DIQSGEEVVTL 215
Query: 61 KGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ 120
GH I + + G+ ++GS+D T+ +WD + G+ H ++ S FS D
Sbjct: 216 TGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSL 275
Query: 121 IVSSSRDKTIKLWN-TLAHCKFTIVEDGHSDWV--SCVRFSPNHQNPIIVSAGWDRMVKV 177
I++ S DKT LW+ T C T+ GH D + SC ++ +I +A D +V
Sbjct: 276 ILTGSMDKTCMLWDATSGKCVATLT--GHDDEILDSCFDYT----GKLIATASADGTARV 329
Query: 178 WNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDI 236
+N T K GH G ++ ++ +P G+ +G D A +WD+ G+ L L H D
Sbjct: 330 YNATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDE 389
Query: 237 ITALCFS 243
I + F+
Sbjct: 390 IFSCAFN 396
Score = 225 (84.3 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 58/211 (27%), Positives = 103/211 (48%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
TL GH + ++ + D I++ S D+T+++W D + G L GH IS
Sbjct: 214 TLTGHLAEIISLSFDTS-GDRIITGSFDHTVVVW-----DASTGRKVHTLIGHCAEISSA 267
Query: 71 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 130
+ S D + L+GS DKT LWD +GK H ++L F + I ++S D T
Sbjct: 268 LFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTA 327
Query: 131 KLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL-TNCKLKINH 189
+++N T +E GH +S + F+P Q +++ D+ ++W++ T L++
Sbjct: 328 RVYNATTRKCITKLE-GHEGEISKISFNP--QGNRLLTGSSDKTARIWDVQTGQCLQVLE 384
Query: 190 SGHTGYLNTVTVSPDGSLCASGGKDMNAMLW 220
GHT + + + G++ +G KD + +W
Sbjct: 385 -GHTDEIFSCAFNYKGNIVITGSKDNSCRIW 414
Score = 54 (24.1 bits), Expect = 3.1e-24, Sum P(2) = 3.1e-24
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 350 LAWSTDGQTLFAGYSDNTIRVWQV 373
++++ G L G SD T R+W V
Sbjct: 351 ISFNPQGNRLLTGSSDKTARIWDV 374
Score = 48 (22.0 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 349 SLAWSTDGQTLFAGYSDNTIRVWQ 372
S A++ G + G DN+ R+W+
Sbjct: 392 SCAFNYKGNIVITGSKDNSCRIWR 415
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 69/246 (28%), Positives = 112/246 (45%)
Query: 3 TETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKG 62
T++ +L L GH G V +P I S S D+++ +W + R + LKG
Sbjct: 55 TKSGRLLWRLAGHRGPVKSCCFSPD-GRLIASSSSDHSIRLWDVARSKCLHV-----LKG 108
Query: 63 HSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 122
H + + S D SG WDK +W++ +G+ H + S FS + +
Sbjct: 109 HQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLA 168
Query: 123 SSSRDKTIKLWNTLAHCKFTIVE--DGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL 180
+ S D T+ +W+ A +GH+ +SC+ +S + ++ S WD+ + VW
Sbjct: 169 TGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYSASG---LLASGSWDKTICVWKP 225
Query: 181 TNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHN-DIITA 239
T L + GHT ++N++ SPD AS G +WD GK L TL D+ A
Sbjct: 226 TTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRTVKVWDCLTGKCLETLKGMLDVAHA 285
Query: 240 LCFSPN 245
F+P+
Sbjct: 286 CIFTPD 291
Score = 250 (93.1 bits), Expect = 2.9e-21, P = 2.9e-21
Identities = 81/279 (29%), Positives = 126/279 (45%)
Query: 48 RDDTNYGVPQKRLKGHSHF-ISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 106
R T V + R G H ++ S DG L+ S D + +W +G+ R H
Sbjct: 9 RAPTRLAVGRVRFYGQHHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHR 68
Query: 107 KDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPII 166
V S FS D R I SSS D +I+LW+ +A K V GH V V FSP+ + +
Sbjct: 69 GPVKSCCFSPDGRLIASSSSDHSIRLWD-VARSKCLHVLKGHQRSVETVSFSPDSKQ--L 125
Query: 167 VSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGK 226
S GWD+ VW + + + GH + + SP A+G D +WDL
Sbjct: 126 ASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRAST 185
Query: 227 HL---HTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPI-NHGKMETPFFSL 281
+ H L H I+ LC+S + L S + K+ + P N+ ++ ++
Sbjct: 186 PVVSYHNLEGHTGNISCLCYSASG------LLASGSWDKTICVWKPTTNNLPLQLKGHTI 239
Query: 282 FRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA-HCKFTI 319
+ V S+AFS D ++ S+ +T+K+W+ L C T+
Sbjct: 240 W--VNSLAFSPDELKLASAGYSRTVKVWDCLTGKCLETL 276
Score = 245 (91.3 bits), Expect = 6.0e-24, Sum P(2) = 6.0e-24
Identities = 71/250 (28%), Positives = 113/250 (45%)
Query: 15 HNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSS 74
H+G V A +P T+L+ S D + +W T G RL GH + S
Sbjct: 25 HHGEVNCSAFSPD-GRTLLTASDDGCVYVW-----GTKSGRLLWRLAGHRGPVKSCCFSP 78
Query: 75 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 134
DG S S D ++RLWD+A K + H + V +V+FS D++Q+ S DK +W
Sbjct: 79 DGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWE 138
Query: 135 TLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINH---SG 191
+ + ++ GH D + FSP + + + WD V +W+L +++ G
Sbjct: 139 VQSGRRVHLLV-GHCDSIQSSDFSPTSDS--LATGSWDSTVHIWDLRASTPVVSYHNLEG 195
Query: 192 HTGYLNTVTVSPDGSLCASGGKDMNAMLWD-LNDGKHLHTLVHNDIITALCFSPNRSFQK 250
HTG ++ + S G L ASG D +W + L H + +L FSP+ +
Sbjct: 196 HTGNISCLCYSASG-LLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDE-LKL 253
Query: 251 IKLDISRTLQ 260
SRT++
Sbjct: 254 ASAGYSRTVK 263
Score = 202 (76.2 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 58/203 (28%), Positives = 86/203 (42%)
Query: 12 LNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV 71
L GH V ++ +P + S D I+W++ G L GH I
Sbjct: 106 LKGHQRSVETVSFSPDSKQ-LASGGWDKRAIVWEVQS-----GRRVHLLVGHCDSIQSSD 159
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTT---RRFEDHTKDVLSVAFSVDNRQIVSSSRDK 128
S + +GSWD T+ +WDL A E HT ++ + +S + S S DK
Sbjct: 160 FSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYSASGL-LASGSWDK 218
Query: 129 TIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKIN 188
TI +W + + GH+ WV+ + FSP+ + SAG+ R VKVW+ K
Sbjct: 219 TICVWKPTTN-NLPLQLKGHTIWVNSLAFSPDELK--LASAGYSRTVKVWDCLTGKCLET 275
Query: 189 HSGHTGYLNTVTVSPDGSLCASG 211
G + +PDG L SG
Sbjct: 276 LKGMLDVAHACIFTPDGKLLVSG 298
Score = 47 (21.6 bits), Expect = 6.0e-24, Sum P(2) = 6.0e-24
Identities = 13/24 (54%), Positives = 16/24 (66%)
Query: 349 SLAWSTDGQTLF-AGYSDNTIRVW 371
SLA+S D L AGYS T++VW
Sbjct: 243 SLAFSPDELKLASAGYS-RTVKVW 265
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 265 (98.3 bits), Expect = 7.3e-24, Sum P(2) = 7.3e-24
Identities = 81/312 (25%), Positives = 140/312 (44%)
Query: 2 STETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLK 61
S T L L H +T +A N K ++ S D T +W DT G L+
Sbjct: 78 SNHTFYLFKVLKAHILPLTNVALN-KSGSCFITGSYDRTCKLW-----DTASGEELNTLE 131
Query: 62 GHSHFISDIVLSSD-GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ 120
GH + + I ++ G+ +GS+DKT +LW + GK F HT +++ ++F+ +
Sbjct: 132 GHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTL 191
Query: 121 IVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL 180
+ + S D T KLW+ + + + GHS + + F N I++ +D V VW+
Sbjct: 192 VATGSMDTTAKLWD-IQNGEEVYTLRGHSAEIISLSF--NTSGDRIITGSFDHTVVVWDA 248
Query: 181 TNCKLKINHS-GHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIIT 238
+ K+N GH +++ + + D SL +G D LWD +GK + TL H+D I
Sbjct: 249 DTGR-KVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEIL 307
Query: 239 ALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIV 298
CF KL I+ ++ K ++ ++F+ ++
Sbjct: 308 DSCFDYTG-----KL-IATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLL 361
Query: 299 SSSRDKTIKLWN 310
+ S DKT ++W+
Sbjct: 362 TGSSDKTARIWD 373
Score = 257 (95.5 bits), Expect = 1.7e-22, Sum P(2) = 1.7e-22
Identities = 68/247 (27%), Positives = 118/247 (47%)
Query: 2 STETLQLRGTLNGHNGWVTQIATNPKFPDTILSC-SRDNTLIIWKLTRDDTNYGVPQKRL 60
S ET + T GH + ++ NP+ T+++ S D T +W + + Y L
Sbjct: 163 SVETGKCYHTFRGHTAEIVCLSFNPQ--STLVATGSMDTTAKLWDIQNGEEVY-----TL 215
Query: 61 KGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ 120
+GHS I + ++ G+ ++GS+D T+ +WD G+ H ++ S +F+ D
Sbjct: 216 RGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSL 275
Query: 121 IVSSSRDKTIKLWN-TLAHCKFTIVEDGHSDWV--SCVRFSPNHQNPIIVSAGWDRMVKV 177
I++ S DKT KLW+ T C T+ GH D + SC ++ +I +A D ++
Sbjct: 276 ILTGSMDKTCKLWDATNGKCVATLT--GHDDEILDSCFDYT----GKLIATASADGTARI 329
Query: 178 WNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDI 236
++ K GH G ++ ++ +P G+ +G D A +WD G+ L L H D
Sbjct: 330 FSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDE 389
Query: 237 ITALCFS 243
I + F+
Sbjct: 390 IFSCAFN 396
Score = 234 (87.4 bits), Expect = 3.6e-19, Sum P(2) = 3.6e-19
Identities = 72/300 (24%), Positives = 131/300 (43%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
TL GH V IA N + D I + S D T +W + +T G +GH+ I +
Sbjct: 129 TLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSV---ET--GKCYHTFRGHTAEIVCL 183
Query: 71 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 130
+ +GS D T +LWD+ G+ H+ +++S++F+ +I++ S D T+
Sbjct: 184 SFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTV 243
Query: 131 KLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS 190
+W+ K I+ GH +S F N +I++ D+ K+W+ TN K +
Sbjct: 244 VVWDADTGRKVNILI-GHCAEISSASF--NWDCSLILTGSMDKTCKLWDATNGKCVATLT 300
Query: 191 GHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQ 249
GH + G L A+ D A ++ K + L H I+ + F+P +
Sbjct: 301 GHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHL 360
Query: 250 KIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLW 309
++ + K+ I + G+ ++ S AF+ +++ S+D T ++W
Sbjct: 361 -----LTGSSDKTARI-WDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNTCRIW 414
Score = 52 (23.4 bits), Expect = 7.3e-24, Sum P(2) = 7.3e-24
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 349 SLAWSTDGQTLFAGYSDNTIRVWQ 372
S A++ G + G DNT R+W+
Sbjct: 392 SCAFNYKGNIVITGSKDNTCRIWR 415
Score = 49 (22.3 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 350 LAWSTDGQTLFAGYSDNTIRVW 371
++++ G L G SD T R+W
Sbjct: 351 ISFNPQGNHLLTGSSDKTARIW 372
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 250 (93.1 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 59/192 (30%), Positives = 91/192 (47%)
Query: 12 LNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV 71
L GH + + +P F ++S S D T+ +W D G ++ LKGH++ + DI
Sbjct: 102 LTGHRNCINSVKFHPSF-SLMVSASEDATIKVW-----DFESGEFERTLKGHTNAVQDID 155
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
GN S S D T++LWD + H +V V F+ Q++SSSRDKTIK
Sbjct: 156 FDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIK 215
Query: 132 LWNTLA-HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS 190
+W +C T+V GH DWV + S + I S D+ +K WN+ + +
Sbjct: 216 VWEAATGYCIKTLV--GHEDWVRKITVSED--GSCIASCSNDQTIKTWNIVKGECLATYR 271
Query: 191 GHTGYLNTVTVS 202
H+ + + S
Sbjct: 272 EHSHVVECLAFS 283
Score = 204 (76.9 bits), Expect = 7.8e-14, P = 7.8e-14
Identities = 62/234 (26%), Positives = 106/234 (45%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
TL+GH+ V+ + P D ++S SRD T+ +W+ T Y + K L GH ++ I
Sbjct: 185 TLHGHDHNVSCVRFTPS-GDQLISSSRDKTIKVWEAA---TGYCI--KTLVGHEDWVRKI 238
Query: 71 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 130
+S DG+ S S D+T++ W++ G+ + +H+ V +AFS N I+ D
Sbjct: 239 TVSEDGSCIASCSNDQTIKTWNIVKGECLATYREHSHVVECLAFSTAN--II----DIPG 292
Query: 131 KLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS 190
L +T K + + + V Q + + D+ +K+W L + +
Sbjct: 293 SLLST-PEGKSKVKQGPGGNLVG--------QCGYLATGSRDKTIKIWELATGRCLATYI 343
Query: 191 GHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTL--VHNDIITALCF 242
GH ++ V P G S G D +WD+ G+ + T+ H I+ L F
Sbjct: 344 GHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQGRCIKTINEAHTHFISCLDF 397
Score = 165 (63.1 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 37/104 (35%), Positives = 59/104 (56%)
Query: 78 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTL- 136
Y +GS DKT+++W+LA G+ + H V +V F + ++S DKTI++W+
Sbjct: 318 YLATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQ 377
Query: 137 AHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL 180
C TI E H+ ++SC+ F + NP I + G D ++KVW L
Sbjct: 378 GRCIKTINE-AHTHFISCLDFCLH--NPHIATGGVDDVIKVWKL 418
Score = 148 (57.2 bits), Expect = 9.6e-08, Sum P(2) = 9.6e-08
Identities = 59/245 (24%), Positives = 105/245 (42%)
Query: 147 GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGS 206
GH + ++ V+F P+ ++VSA D +KVW+ + + + GHT + + G+
Sbjct: 104 GHRNCINSVKFHPSFS--LMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGN 161
Query: 207 LCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLI 265
L AS D+ LWD + TL H+ ++ + F+P+ Q I +T++
Sbjct: 162 LLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGD-QLISSSRDKTIK----- 215
Query: 266 LYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTL-AHCKFT------ 318
++ G V + S D I S S D+TIK WN + C T
Sbjct: 216 VWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYREHSH 275
Query: 319 IVD---LETKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQT--LFAGYSDNTIRVWQV 373
+V+ T +++ P + + + + + GQ L G D TI++W++
Sbjct: 276 VVECLAFSTANIIDI--PGSLLSTPEGKSKVKQGPGGNLVGQCGYLATGSRDKTIKIWEL 333
Query: 374 SVTSR 378
+ T R
Sbjct: 334 A-TGR 337
Score = 142 (55.0 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 32/104 (30%), Positives = 54/104 (51%)
Query: 121 IVSSSRDKTIKLWN-TLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
+ + SRDKTIK+W C T + GH +WV VRF P + ++S G D+ ++VW+
Sbjct: 319 LATGSRDKTIKIWELATGRCLATYI--GHDNWVRAVRFHPCGK--FLLSVGDDKTIRVWD 374
Query: 180 LTNCK-LKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
+ + +K + HT +++ + A+GG D +W L
Sbjct: 375 IAQGRCIKTINEAHTHFISCLDFCLHNPHIATGGVDDVIKVWKL 418
Score = 116 (45.9 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 38/137 (27%), Positives = 61/137 (44%)
Query: 190 SGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSF 248
+GH +N+V P SL S +D +WD G+ TL H + + + F +
Sbjct: 103 TGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNL 162
Query: 249 -QKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIK 307
D+ T++ + Y ++T +V V F+ Q++SSSRDKTIK
Sbjct: 163 LASCSADL--TIKLWDFQTYDC----VKT-LHGHDHNVSCVRFTPSGDQLISSSRDKTIK 215
Query: 308 LWNTLA-HCKFTIVDLE 323
+W +C T+V E
Sbjct: 216 VWEAATGYCIKTLVGHE 232
Score = 74 (31.1 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 29/119 (24%), Positives = 53/119 (44%)
Query: 199 VTVSPDGSL---C---ASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKI 251
V P G+L C A+G +D +W+L G+ L T + H++ + A+ F P F +
Sbjct: 304 VKQGPGGNLVGQCGYLATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFL-L 362
Query: 252 KLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLS-VAFSVDNRQIVSSSRDKTIKLW 309
+ +T++ ++ I G+ +S + F + N I + D IK+W
Sbjct: 363 SVGDDKTIR-----VWDIAQGRCIKTINEAHTHFISCLDFCLHNPHIATGGVDDVIKVW 416
Score = 47 (21.6 bits), Expect = 7.7e-21, Sum P(2) = 7.7e-21
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 285 VLSVAFSVDNRQIVSSSRDKTIKLWNTL-AHCKFTIVDLET 324
V +V F + ++S DKTI++W+ C TI + T
Sbjct: 349 VRAVRFHPCGKFLLSVGDDKTIRVWDIAQGRCIKTINEAHT 389
Score = 43 (20.2 bits), Expect = 2.0e-20, Sum P(2) = 2.0e-20
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 356 GQTLFAGYSDNTIRVWQVS 374
G+ L + D TIRVW ++
Sbjct: 358 GKFLLSVGDDKTIRVWDIA 376
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 248 (92.4 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 74/245 (30%), Positives = 115/245 (46%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
TL GH+G V ++ N + S S D T+ +W D+ G KRLKGH+ F++
Sbjct: 104 TLKGHSGAVMELHYNTD-GSMLFSASTDKTVAVW-----DSETGERVKRLKGHTSFVNSC 157
Query: 71 VLSSDG-NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKT 129
+ G +GS D T++LWD+ + F++ T VL+V F+ + QI+S D
Sbjct: 158 YPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQN-TYQVLAVTFNDTSDQIISGGIDND 216
Query: 130 IKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT------NC 183
IK+W+ L K T GH+D V+ + S + ++S D V+VW++ C
Sbjct: 217 IKVWD-LRQNKLTYTMRGHADSVTGLSLSS--EGSYLLSNAMDNTVRVWDVRPFAPKERC 273
Query: 184 KLKINHSGHTGYLNTVTVS--PDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITAL 240
+ H N + S PDGS A+G D +WD + L+ L H I +
Sbjct: 274 VKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEV 333
Query: 241 CFSPN 245
F P+
Sbjct: 334 AFHPD 338
Score = 247 (92.0 bits), Expect = 4.1e-23, Sum P(2) = 4.1e-23
Identities = 64/212 (30%), Positives = 101/212 (47%)
Query: 12 LNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV 71
L+GH G V +P T+ S D +++W + D NY LKGHS + ++
Sbjct: 62 LSGHEGEVYCCKFHPN-GSTLASAGFDRLILLWNVYGDCDNYAT----LKGHSGAVMELH 116
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SSSRDKTI 130
++DG+ S S DKT+ +WD G+ +R + HT V S + Q+V + S D T+
Sbjct: 117 YNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTV 176
Query: 131 KLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS 190
KLW+ ++ + V V F N + I+S G D +KVW+L KL
Sbjct: 177 KLWDIRKKAAIQTFQNTYQ--VLAVTF--NDTSDQIISGGIDNDIKVWDLRQNKLTYTMR 232
Query: 191 GHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
GH + +++S +GS S D +WD+
Sbjct: 233 GHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 264
Score = 182 (69.1 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 64/268 (23%), Positives = 120/268 (44%)
Query: 56 PQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAF 114
P L GH + +G+ S +D+ + LW++ + H+ V+ + +
Sbjct: 58 PIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHY 117
Query: 115 SVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWV-SCVRFSPNHQNPIIVSAGWDR 173
+ D + S+S DKT+ +W++ + ++ GH+ +V SC P + P +V G D
Sbjct: 118 NTDGSMLFSASTDKTVAVWDSETGERVKRLK-GHTSFVNSCY---PARRGPQLVCTGSDD 173
Query: 174 -MVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV 232
VK+W++ K I +T + VT + SGG D + +WDL K +T+
Sbjct: 174 GTVKLWDIRK-KAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR 232
Query: 233 -HNDIITALCFSPNRSF-------QKIKL-DISRTLQKSNLILYPINHGKMETPFFSLFR 283
H D +T L S S+ +++ D+ K + I G + F +
Sbjct: 233 GHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCV--KIFQGNVHN--FE--K 286
Query: 284 DVLSVAFSVDNRQIVSSSRDKTIKLWNT 311
++L ++S D +I + S D+ + +W+T
Sbjct: 287 NLLRCSWSPDGSKIAAGSADRFVYVWDT 314
Score = 170 (64.9 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 48/225 (21%), Positives = 94/225 (41%)
Query: 3 TETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKG 62
+ET + L GH +V + P + + S D T+ +W + R Q
Sbjct: 138 SETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI-RKKAAIQTFQ----- 191
Query: 63 HSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 122
+++ + + + + +SG D +++WDL K T H V ++ S + ++
Sbjct: 192 NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLL 251
Query: 123 SSSRDKTIKLWNTLA-----HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKV 177
S++ D T+++W+ C + H+ + +R S + I + DR V V
Sbjct: 252 SNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYV 311
Query: 178 WNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
W+ T+ ++ GH G +N V PD + S D + ++
Sbjct: 312 WDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASSDKRLYMGEI 356
Score = 166 (63.5 bits), Expect = 9.7e-13, Sum P(2) = 9.7e-13
Identities = 49/174 (28%), Positives = 79/174 (45%)
Query: 147 GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT-NCKLKINHSGHTGYLNTVTVSPDG 205
GH V C +F PN + SAG+DR++ +WN+ +C GH+G + + + DG
Sbjct: 64 GHEGEVYCCKFHPNGST--LASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDG 121
Query: 206 SLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNL 264
S+ S D +WD G+ + L H + + C+ R Q + K
Sbjct: 122 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRGPQLVCTGSDDGTVK--- 177
Query: 265 ILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFT 318
L+ I F + ++ VL+V F+ + QI+S D IK+W+ L K T
Sbjct: 178 -LWDIRKKAAIQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWD-LRQNKLT 228
Score = 68 (29.0 bits), Expect = 9.7e-13, Sum P(2) = 9.7e-13
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 320 VDLETKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQV 373
+D + K V +LR + ++ + + L+ S++G L + DNT+RVW V
Sbjct: 213 IDNDIK--VWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 264
Score = 62 (26.9 bits), Expect = 4.1e-23, Sum P(2) = 4.1e-23
Identities = 22/94 (23%), Positives = 41/94 (43%)
Query: 285 VLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADP 344
V ++ S + ++S++ D T+++W+ + K+ ++ V K
Sbjct: 238 VTGLSLSSEGSYLLSNAMDNTVRVWD--------VRPFAPKERCVKIFQGNVHNFEKN-- 287
Query: 345 PMCLSLAWSTDGQTLFAGYSDNTIRVWQVSVTSR 378
L +WS DG + AG +D + VW TSR
Sbjct: 288 --LLRCSWSPDGSKIAAGSADRFVYVWDT--TSR 317
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 248 (92.4 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 74/245 (30%), Positives = 115/245 (46%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
TL GH+G V ++ N + S S D T+ +W D+ G KRLKGH+ F++
Sbjct: 105 TLKGHSGAVMELHYNTD-GSMLFSASTDKTVAVW-----DSETGERVKRLKGHTSFVNSC 158
Query: 71 VLSSDG-NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKT 129
+ G +GS D T++LWD+ + F++ T VL+V F+ + QI+S D
Sbjct: 159 YPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQN-TYQVLAVTFNDTSDQIISGGIDND 217
Query: 130 IKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT------NC 183
IK+W+ L K T GH+D V+ + S + ++S D V+VW++ C
Sbjct: 218 IKVWD-LRQNKLTYTMRGHADSVTGLSLSS--EGSYLLSNAMDNTVRVWDVRPFAPKERC 274
Query: 184 KLKINHSGHTGYLNTVTVS--PDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITAL 240
+ H N + S PDGS A+G D +WD + L+ L H I +
Sbjct: 275 VKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEV 334
Query: 241 CFSPN 245
F P+
Sbjct: 335 AFHPD 339
Score = 247 (92.0 bits), Expect = 4.4e-23, Sum P(2) = 4.4e-23
Identities = 64/212 (30%), Positives = 101/212 (47%)
Query: 12 LNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV 71
L+GH G V +P T+ S D +++W + D NY LKGHS + ++
Sbjct: 63 LSGHEGEVYCCKFHPN-GSTLASAGFDRLILLWNVYGDCDNYAT----LKGHSGAVMELH 117
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SSSRDKTI 130
++DG+ S S DKT+ +WD G+ +R + HT V S + Q+V + S D T+
Sbjct: 118 YNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTV 177
Query: 131 KLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS 190
KLW+ ++ + V V F N + I+S G D +KVW+L KL
Sbjct: 178 KLWDIRKKAAIQTFQNTYQ--VLAVTF--NDTSDQIISGGIDNDIKVWDLRQNKLTYTMR 233
Query: 191 GHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
GH + +++S +GS S D +WD+
Sbjct: 234 GHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Score = 182 (69.1 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 64/268 (23%), Positives = 120/268 (44%)
Query: 56 PQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAF 114
P L GH + +G+ S +D+ + LW++ + H+ V+ + +
Sbjct: 59 PIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHY 118
Query: 115 SVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWV-SCVRFSPNHQNPIIVSAGWDR 173
+ D + S+S DKT+ +W++ + ++ GH+ +V SC P + P +V G D
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRLK-GHTSFVNSCY---PARRGPQLVCTGSDD 174
Query: 174 -MVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV 232
VK+W++ K I +T + VT + SGG D + +WDL K +T+
Sbjct: 175 GTVKLWDIRK-KAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR 233
Query: 233 -HNDIITALCFSPNRSF-------QKIKL-DISRTLQKSNLILYPINHGKMETPFFSLFR 283
H D +T L S S+ +++ D+ K + I G + F +
Sbjct: 234 GHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCV--KIFQGNVHN--FE--K 287
Query: 284 DVLSVAFSVDNRQIVSSSRDKTIKLWNT 311
++L ++S D +I + S D+ + +W+T
Sbjct: 288 NLLRCSWSPDGSKIAAGSADRFVYVWDT 315
Score = 170 (64.9 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 48/225 (21%), Positives = 94/225 (41%)
Query: 3 TETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKG 62
+ET + L GH +V + P + + S D T+ +W + R Q
Sbjct: 139 SETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI-RKKAAIQTFQ----- 192
Query: 63 HSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 122
+++ + + + + +SG D +++WDL K T H V ++ S + ++
Sbjct: 193 NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLL 252
Query: 123 SSSRDKTIKLWNTLA-----HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKV 177
S++ D T+++W+ C + H+ + +R S + I + DR V V
Sbjct: 253 SNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYV 312
Query: 178 WNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
W+ T+ ++ GH G +N V PD + S D + ++
Sbjct: 313 WDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEI 357
Score = 166 (63.5 bits), Expect = 9.9e-13, Sum P(2) = 9.9e-13
Identities = 49/174 (28%), Positives = 79/174 (45%)
Query: 147 GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT-NCKLKINHSGHTGYLNTVTVSPDG 205
GH V C +F PN + SAG+DR++ +WN+ +C GH+G + + + DG
Sbjct: 65 GHEGEVYCCKFHPNGST--LASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDG 122
Query: 206 SLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNL 264
S+ S D +WD G+ + L H + + C+ R Q + K
Sbjct: 123 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRGPQLVCTGSDDGTVK--- 178
Query: 265 ILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFT 318
L+ I F + ++ VL+V F+ + QI+S D IK+W+ L K T
Sbjct: 179 -LWDIRKKAAIQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWD-LRQNKLT 229
Score = 68 (29.0 bits), Expect = 9.9e-13, Sum P(2) = 9.9e-13
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 320 VDLETKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQV 373
+D + K V +LR + ++ + + L+ S++G L + DNT+RVW V
Sbjct: 214 IDNDIK--VWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Score = 62 (26.9 bits), Expect = 4.4e-23, Sum P(2) = 4.4e-23
Identities = 22/94 (23%), Positives = 41/94 (43%)
Query: 285 VLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADP 344
V ++ S + ++S++ D T+++W+ + K+ ++ V K
Sbjct: 239 VTGLSLSSEGSYLLSNAMDNTVRVWD--------VRPFAPKERCVKIFQGNVHNFEKN-- 288
Query: 345 PMCLSLAWSTDGQTLFAGYSDNTIRVWQVSVTSR 378
L +WS DG + AG +D + VW TSR
Sbjct: 289 --LLRCSWSPDGSKIAAGSADRFVYVWDT--TSR 318
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 248 (92.4 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 74/245 (30%), Positives = 115/245 (46%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
TL GH+G V ++ N + S S D T+ +W D+ G KRLKGH+ F++
Sbjct: 105 TLKGHSGAVMELHYNTD-GSMLFSASTDKTVAVW-----DSETGERVKRLKGHTSFVNSC 158
Query: 71 VLSSDG-NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKT 129
+ G +GS D T++LWD+ + F++ T VL+V F+ + QI+S D
Sbjct: 159 YPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQN-TYQVLAVTFNDTSDQIISGGIDND 217
Query: 130 IKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT------NC 183
IK+W+ L K T GH+D V+ + S + ++S D V+VW++ C
Sbjct: 218 IKVWD-LRQNKLTYTMRGHADSVTGLSLSS--EGSYLLSNAMDNTVRVWDVRPFAPKERC 274
Query: 184 KLKINHSGHTGYLNTVTVS--PDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITAL 240
+ H N + S PDGS A+G D +WD + L+ L H I +
Sbjct: 275 VKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEV 334
Query: 241 CFSPN 245
F P+
Sbjct: 335 AFHPD 339
Score = 247 (92.0 bits), Expect = 4.4e-23, Sum P(2) = 4.4e-23
Identities = 64/212 (30%), Positives = 101/212 (47%)
Query: 12 LNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV 71
L+GH G V +P T+ S D +++W + D NY LKGHS + ++
Sbjct: 63 LSGHEGEVYCCKFHPN-GSTLASAGFDRLILLWNVYGDCDNYAT----LKGHSGAVMELH 117
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SSSRDKTI 130
++DG+ S S DKT+ +WD G+ +R + HT V S + Q+V + S D T+
Sbjct: 118 YNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTV 177
Query: 131 KLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS 190
KLW+ ++ + V V F N + I+S G D +KVW+L KL
Sbjct: 178 KLWDIRKKAAIQTFQNTYQ--VLAVTF--NDTSDQIISGGIDNDIKVWDLRQNKLTYTMR 233
Query: 191 GHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
GH + +++S +GS S D +WD+
Sbjct: 234 GHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Score = 182 (69.1 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 64/268 (23%), Positives = 120/268 (44%)
Query: 56 PQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAF 114
P L GH + +G+ S +D+ + LW++ + H+ V+ + +
Sbjct: 59 PIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHY 118
Query: 115 SVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWV-SCVRFSPNHQNPIIVSAGWDR 173
+ D + S+S DKT+ +W++ + ++ GH+ +V SC P + P +V G D
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRLK-GHTSFVNSCY---PARRGPQLVCTGSDD 174
Query: 174 -MVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV 232
VK+W++ K I +T + VT + SGG D + +WDL K +T+
Sbjct: 175 GTVKLWDIRK-KAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR 233
Query: 233 -HNDIITALCFSPNRSF-------QKIKL-DISRTLQKSNLILYPINHGKMETPFFSLFR 283
H D +T L S S+ +++ D+ K + I G + F +
Sbjct: 234 GHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCV--KIFQGNVHN--FE--K 287
Query: 284 DVLSVAFSVDNRQIVSSSRDKTIKLWNT 311
++L ++S D +I + S D+ + +W+T
Sbjct: 288 NLLRCSWSPDGSKIAAGSADRFVYVWDT 315
Score = 170 (64.9 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 48/225 (21%), Positives = 94/225 (41%)
Query: 3 TETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKG 62
+ET + L GH +V + P + + S D T+ +W + R Q
Sbjct: 139 SETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI-RKKAAIQTFQ----- 192
Query: 63 HSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 122
+++ + + + + +SG D +++WDL K T H V ++ S + ++
Sbjct: 193 NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLL 252
Query: 123 SSSRDKTIKLWNTLA-----HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKV 177
S++ D T+++W+ C + H+ + +R S + I + DR V V
Sbjct: 253 SNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYV 312
Query: 178 WNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
W+ T+ ++ GH G +N V PD + S D + ++
Sbjct: 313 WDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEI 357
Score = 166 (63.5 bits), Expect = 9.9e-13, Sum P(2) = 9.9e-13
Identities = 49/174 (28%), Positives = 79/174 (45%)
Query: 147 GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT-NCKLKINHSGHTGYLNTVTVSPDG 205
GH V C +F PN + SAG+DR++ +WN+ +C GH+G + + + DG
Sbjct: 65 GHEGEVYCCKFHPNGST--LASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDG 122
Query: 206 SLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNL 264
S+ S D +WD G+ + L H + + C+ R Q + K
Sbjct: 123 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRGPQLVCTGSDDGTVK--- 178
Query: 265 ILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFT 318
L+ I F + ++ VL+V F+ + QI+S D IK+W+ L K T
Sbjct: 179 -LWDIRKKAAIQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWD-LRQNKLT 229
Score = 68 (29.0 bits), Expect = 9.9e-13, Sum P(2) = 9.9e-13
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 320 VDLETKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQV 373
+D + K V +LR + ++ + + L+ S++G L + DNT+RVW V
Sbjct: 214 IDNDIK--VWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Score = 62 (26.9 bits), Expect = 4.4e-23, Sum P(2) = 4.4e-23
Identities = 22/94 (23%), Positives = 41/94 (43%)
Query: 285 VLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADP 344
V ++ S + ++S++ D T+++W+ + K+ ++ V K
Sbjct: 239 VTGLSLSSEGSYLLSNAMDNTVRVWD--------VRPFAPKERCVKIFQGNVHNFEKN-- 288
Query: 345 PMCLSLAWSTDGQTLFAGYSDNTIRVWQVSVTSR 378
L +WS DG + AG +D + VW TSR
Sbjct: 289 --LLRCSWSPDGSKIAAGSADRFVYVWDT--TSR 318
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 270 (100.1 bits), Expect = 4.6e-23, Sum P(2) = 4.6e-23
Identities = 64/203 (31%), Positives = 106/203 (52%)
Query: 49 DDTNYGVPQK-RLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 107
+ NY QK L+GH +S + S D + SG D +++W + GK FE H
Sbjct: 162 ESVNYR--QKFLLRGHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEGHLA 219
Query: 108 DVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIV 167
+ ++++S D I S S DKTI+LWN L GH ++V + FSP + ++V
Sbjct: 220 GISTISWSPDGATIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSP--KGNMLV 277
Query: 168 SAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKH 227
S +D V +W++ + ++ + H+ ++ + V DG+L AS D +WD + G+
Sbjct: 278 SGSYDEAVFLWDVRSARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTSTGQC 337
Query: 228 LHTLVHNDI--ITALCFSPNRSF 248
L TLVH D ++++ FSPN +
Sbjct: 338 LRTLVHEDNPPVSSVKFSPNGKY 360
Score = 201 (75.8 bits), Expect = 6.4e-13, Sum P(2) = 6.4e-13
Identities = 62/250 (24%), Positives = 115/250 (46%)
Query: 2 STETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLK 61
+ T +L T GH ++ I+ +P TI S S D T+ +W + T P +
Sbjct: 204 AASTGKLIYTFEGHLAGISTISWSPDGA-TIASGSDDKTIRLWNVL---TGKAHPTPFI- 258
Query: 62 GHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 121
GH +++ I S GN +SGS+D+ + LWD+ + + + H+ V + D I
Sbjct: 259 GHHNYVYAIAFSPKGNMLVSGSYDEAVFLWDVRSARVMKSLPAHSDPVSGIDVVWDGTLI 318
Query: 122 VSSSRDKTIKLWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL 180
S + D +++W+T C T+V + + VS V+FSPN + +++ D V++W+
Sbjct: 319 ASCATDGLVRIWDTSTGQCLRTLVHEDNPP-VSSVKFSPNGK--YVLAWTLDDCVRLWDY 375
Query: 181 TNCKLKINHSGHTG-----------YLNTVTV-SPDGSLCASGGKDMNAMLWDLNDGKHL 228
+ + GH+ Y ++ +P + SG +D + WD+ K L
Sbjct: 376 VEGRCLKTYQGHSNKKYSLSGAFGVYGQSIPGRTPGYAFAVSGSEDGAILCWDVVTKKVL 435
Query: 229 HTL-VHNDII 237
+ H+ ++
Sbjct: 436 QRIEAHDGVV 445
Score = 195 (73.7 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 64/222 (28%), Positives = 98/222 (44%)
Query: 12 LNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV 71
L GH V+ + +P I S D + +W + Y +GH IS I
Sbjct: 172 LRGHLRGVSAVRFSPD-ASMIASGGADGAVKVWAASTGKLIY-----TFEGHLAGISTIS 225
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKT-TRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 130
S DG SGS DKT+RLW++ GK F H V ++AFS +VS S D+ +
Sbjct: 226 WSPDGATIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGNMLVSGSYDEAV 285
Query: 131 KLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTN--CKLKIN 188
LW+ + + HSD VS + +I S D +V++W+ + C +
Sbjct: 286 FLWDVRS-ARVMKSLPAHSDPVSGIDVV--WDGTLIASCATDGLVRIWDTSTGQCLRTLV 342
Query: 189 HSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHT 230
H + +++V SP+G + D LWD +G+ L T
Sbjct: 343 HEDNPP-VSSVKFSPNGKYVLAWTLDDCVRLWDYVEGRCLKT 383
Score = 174 (66.3 bits), Expect = 9.3e-10, Sum P(2) = 9.3e-10
Identities = 62/260 (23%), Positives = 110/260 (42%)
Query: 105 HTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNP 164
H + V +V FS D I S D +K+W + K +GH +S + +SP+
Sbjct: 175 HLRGVSAVRFSPDASMIASGGADGAVKVW-AASTGKLIYTFEGHLAGISTISWSPD--GA 231
Query: 165 IIVSAGWDRMVKVWN-LTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLN 223
I S D+ +++WN LT GH Y+ + SP G++ SG D LWD+
Sbjct: 232 TIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGNMLVSGSYDEAVFLWDVR 291
Query: 224 DGKHLHTL-VHNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGK-METPFFSL 281
+ + +L H+D ++ + + + I+ + ++ + G+ + T
Sbjct: 292 SARVMKSLPAHSDPVSGIDVVWDGTL------IASCATDGLVRIWDTSTGQCLRTLVHED 345
Query: 282 FRDVLSVAFSVDNRQIVSSSRDKTIKLWNTL-AHCKFTIVDLETKKMVEELRPDVVSQST 340
V SV FS + + +++ + D ++LW+ + C T KK V QS
Sbjct: 346 NPPVSSVKFSPNGKYVLAWTLDDCVRLWDYVEGRCLKTYQGHSNKKYSLSGAFGVYGQSI 405
Query: 341 KADPP-MCLSLAWSTDGQTL 359
P +++ S DG L
Sbjct: 406 PGRTPGYAFAVSGSEDGAIL 425
Score = 133 (51.9 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 40/131 (30%), Positives = 64/131 (48%)
Query: 182 NCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITAL 240
N + K GH ++ V SPD S+ ASGG D +W + GK ++T H I+ +
Sbjct: 165 NYRQKFLLRGHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEGHLAGISTI 224
Query: 241 CFSPNRSFQKIKLDISRTLQKSNLILYPINHGKME-TPFFSLFRDVLSVAFSVDNRQIVS 299
+SP+ + D +T++ N++ GK TPF V ++AFS +VS
Sbjct: 225 SWSPDGATIASGSD-DKTIRLWNVLT-----GKAHPTPFIGHHNYVYAIAFSPKGNMLVS 278
Query: 300 SSRDKTIKLWN 310
S D+ + LW+
Sbjct: 279 GSYDEAVFLWD 289
Score = 129 (50.5 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 46/160 (28%), Positives = 69/160 (43%)
Query: 32 ILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHF-ISDIVLSSDGNYALSGSWDKTLRL 90
I SC+ D + IW DT+ G + L + +S + S +G Y L+ + D +RL
Sbjct: 318 IASCATDGLVRIW-----DTSTGQCLRTLVHEDNPPVSSVKFSPNGKYVLAWTLDDCVRL 372
Query: 91 WDLAAGKTTRRFEDHT--KDVLSVAFSVDNRQI----------VSSSRDKTIKLWNTLAH 138
WD G+ + ++ H+ K LS AF V + I VS S D I W+ +
Sbjct: 373 WDYVEGRCLKTYQGHSNKKYSLSGAFGVYGQSIPGRTPGYAFAVSGSEDGAILCWDVVTK 432
Query: 139 CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVW 178
+E H V V + +VS G D V+VW
Sbjct: 433 KVLQRIE-AHDGVVLGVDTCSTGEGRFMVSCGLDGTVRVW 471
Score = 49 (22.3 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 342 ADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVS 374
+DP + + W DG + + +D +R+W S
Sbjct: 303 SDPVSGIDVVW--DGTLIASCATDGLVRIWDTS 333
Score = 45 (20.9 bits), Expect = 4.6e-23, Sum P(2) = 4.6e-23
Identities = 9/29 (31%), Positives = 19/29 (65%)
Query: 343 DPPMCLSLAWSTDGQTLFAGYSDNTIRVW 371
+PP+ S+ +S +G+ + A D+ +R+W
Sbjct: 346 NPPVS-SVKFSPNGKYVLAWTLDDCVRLW 373
Score = 37 (18.1 bits), Expect = 3.1e-22, Sum P(2) = 3.1e-22
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 355 DGQTLFAGYSDNTIRVWQ 372
+G+ + + D T+RVW+
Sbjct: 455 EGRFMVSCGLDGTVRVWE 472
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 248 (92.4 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 74/245 (30%), Positives = 115/245 (46%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
TL GH+G V ++ N + S S D T+ +W D+ G KRLKGH+ F++
Sbjct: 105 TLKGHSGAVMELHYNTD-GSMLFSASTDKTVAVW-----DSETGERVKRLKGHTSFVNSC 158
Query: 71 VLSSDG-NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKT 129
+ G +GS D T++LWD+ + F++ T VL+V F+ + QI+S D
Sbjct: 159 YPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQN-TYQVLAVTFNDTSDQIISGGIDND 217
Query: 130 IKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT------NC 183
IK+W+ L K T GH+D V+ + S + ++S D V+VW++ C
Sbjct: 218 IKVWD-LRQNKLTYTMRGHADSVTGLSLSS--EGSYLLSNAMDNTVRVWDVRPFAPKERC 274
Query: 184 KLKINHSGHTGYLNTVTVS--PDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITAL 240
+ H N + S PDGS A+G D +WD + L+ L H I +
Sbjct: 275 VRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEV 334
Query: 241 CFSPN 245
F P+
Sbjct: 335 AFHPD 339
Score = 247 (92.0 bits), Expect = 5.6e-23, Sum P(2) = 5.6e-23
Identities = 64/212 (30%), Positives = 101/212 (47%)
Query: 12 LNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV 71
L+GH G V +P T+ S D +++W + D NY LKGHS + ++
Sbjct: 63 LSGHEGEVYCCKFHPN-GSTLASAGFDRLILLWNVYGDCDNYAT----LKGHSGAVMELH 117
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SSSRDKTI 130
++DG+ S S DKT+ +WD G+ +R + HT V S + Q+V + S D T+
Sbjct: 118 YNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTV 177
Query: 131 KLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS 190
KLW+ ++ + V V F N + I+S G D +KVW+L KL
Sbjct: 178 KLWDIRKKAAIQTFQNTYQ--VLAVTF--NDTSDQIISGGIDNDIKVWDLRQNKLTYTMR 233
Query: 191 GHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
GH + +++S +GS S D +WD+
Sbjct: 234 GHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Score = 181 (68.8 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 64/268 (23%), Positives = 120/268 (44%)
Query: 56 PQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAF 114
P L GH + +G+ S +D+ + LW++ + H+ V+ + +
Sbjct: 59 PIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHY 118
Query: 115 SVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWV-SCVRFSPNHQNPIIVSAGWDR 173
+ D + S+S DKT+ +W++ + ++ GH+ +V SC P + P +V G D
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRLK-GHTSFVNSCY---PARRGPQLVCTGSDD 174
Query: 174 -MVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV 232
VK+W++ K I +T + VT + SGG D + +WDL K +T+
Sbjct: 175 GTVKLWDIRK-KAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR 233
Query: 233 -HNDIITALCFSPNRSF-------QKIKL-DISRTLQKSNLILYPINHGKMETPFFSLFR 283
H D +T L S S+ +++ D+ K + I G + F +
Sbjct: 234 GHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVR--IFQGNVHN--FE--K 287
Query: 284 DVLSVAFSVDNRQIVSSSRDKTIKLWNT 311
++L ++S D +I + S D+ + +W+T
Sbjct: 288 NLLRCSWSPDGSKIAAGSADRFVYVWDT 315
Score = 170 (64.9 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 48/225 (21%), Positives = 94/225 (41%)
Query: 3 TETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKG 62
+ET + L GH +V + P + + S D T+ +W + R Q
Sbjct: 139 SETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI-RKKAAIQTFQ----- 192
Query: 63 HSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 122
+++ + + + + +SG D +++WDL K T H V ++ S + ++
Sbjct: 193 NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLL 252
Query: 123 SSSRDKTIKLWNTLA-----HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKV 177
S++ D T+++W+ C + H+ + +R S + I + DR V V
Sbjct: 253 SNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYV 312
Query: 178 WNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
W+ T+ ++ GH G +N V PD + S D + ++
Sbjct: 313 WDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEI 357
Score = 166 (63.5 bits), Expect = 9.9e-13, Sum P(2) = 9.9e-13
Identities = 49/174 (28%), Positives = 79/174 (45%)
Query: 147 GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT-NCKLKINHSGHTGYLNTVTVSPDG 205
GH V C +F PN + SAG+DR++ +WN+ +C GH+G + + + DG
Sbjct: 65 GHEGEVYCCKFHPNGST--LASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDG 122
Query: 206 SLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNL 264
S+ S D +WD G+ + L H + + C+ R Q + K
Sbjct: 123 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRGPQLVCTGSDDGTVK--- 178
Query: 265 ILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFT 318
L+ I F + ++ VL+V F+ + QI+S D IK+W+ L K T
Sbjct: 179 -LWDIRKKAAIQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWD-LRQNKLT 229
Score = 68 (29.0 bits), Expect = 9.9e-13, Sum P(2) = 9.9e-13
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 320 VDLETKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQV 373
+D + K V +LR + ++ + + L+ S++G L + DNT+RVW V
Sbjct: 214 IDNDIK--VWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Score = 61 (26.5 bits), Expect = 5.6e-23, Sum P(2) = 5.6e-23
Identities = 22/94 (23%), Positives = 40/94 (42%)
Query: 285 VLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADP 344
V ++ S + ++S++ D T+++W+ + K+ + V K
Sbjct: 239 VTGLSLSSEGSYLLSNAMDNTVRVWD--------VRPFAPKERCVRIFQGNVHNFEKN-- 288
Query: 345 PMCLSLAWSTDGQTLFAGYSDNTIRVWQVSVTSR 378
L +WS DG + AG +D + VW TSR
Sbjct: 289 --LLRCSWSPDGSKIAAGSADRFVYVWDT--TSR 318
Score = 37 (18.1 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 288 VAFSVDNRQIVSSSRDKTI 306
VAF D I+S+S DK +
Sbjct: 334 VAFHPDEPIILSASSDKRL 352
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 259 (96.2 bits), Expect = 6.2e-23, Sum P(2) = 6.2e-23
Identities = 79/312 (25%), Positives = 139/312 (44%)
Query: 2 STETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLK 61
S L L H +T +A N K ++ S D T +W DT G L+
Sbjct: 78 SNHKFYLFKVLRAHILPLTNVALN-KSGSCFITGSYDRTCKLW-----DTASGEELHTLE 131
Query: 62 GHSHFISDIVLSSD-GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ 120
GH + + I ++ G+ +GS+DKT +LW + GK F HT +++ ++F+ +
Sbjct: 132 GHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTL 191
Query: 121 IVSSSRDKTIKLWNTLAHCK-FTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
+ + S D T KLW+ + + FT+ GHS + + F+ + I++ +D V VW
Sbjct: 192 VATGSMDTTAKLWDIQSGEEVFTLT--GHSAEIISLSFNTSGNR--IITGSFDHTVTVWE 247
Query: 180 LTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIIT 238
+ GH +++ + D SL +G D LWD +GK + TL H+D I
Sbjct: 248 ADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEIL 307
Query: 239 ALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIV 298
CF KL I+ ++ + T ++ ++F+ +++
Sbjct: 308 DSCFDYTG-----KL-IATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLL 361
Query: 299 SSSRDKTIKLWN 310
+ S DKT ++W+
Sbjct: 362 TGSSDKTARIWD 373
Score = 250 (93.1 bits), Expect = 1.6e-21, Sum P(2) = 1.6e-21
Identities = 67/247 (27%), Positives = 115/247 (46%)
Query: 2 STETLQLRGTLNGHNGWVTQIATNPKFPDTILSC-SRDNTLIIWKLTRDDTNYGVPQKRL 60
S ET + T GH + ++ NP+ T+++ S D T +W D G L
Sbjct: 163 SVETGKCYHTFRGHTAEIVCLSFNPQ--STLVATGSMDTTAKLW-----DIQSGEEVFTL 215
Query: 61 KGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ 120
GHS I + ++ GN ++GS+D T+ +W+ G+ H ++ S F+ D
Sbjct: 216 TGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSL 275
Query: 121 IVSSSRDKTIKLWNTL-AHCKFTIVEDGHSDWV--SCVRFSPNHQNPIIVSAGWDRMVKV 177
I++ S DKT KLW+ + C T+ GH D + SC ++ +I +A D ++
Sbjct: 276 ILTGSMDKTCKLWDAVNGKCVATLT--GHDDEILDSCFDYT----GKLIATASADGTARI 329
Query: 178 WNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDI 236
++ + GH G ++ ++ +P G+ +G D A +WD G+ L L H D
Sbjct: 330 FSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDE 389
Query: 237 ITALCFS 243
I + F+
Sbjct: 390 IFSCAFN 396
Score = 228 (85.3 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 73/301 (24%), Positives = 134/301 (44%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
TL GH V IA N + D I + S D T +W + +T G +GH+ I +
Sbjct: 129 TLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSV---ET--GKCYHTFRGHTAEIVCL 183
Query: 71 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 130
+ +GS D T +LWD+ +G+ H+ +++S++F+ +I++ S D T+
Sbjct: 184 SFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTV 243
Query: 131 KLWNTLAHCK-FTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINH 189
+W K +T++ GH +S F N +I++ D+ K+W+ N K
Sbjct: 244 TVWEADTGRKVYTLI--GHCAEISSAVF--NWDCSLILTGSMDKTCKLWDAVNGKCVATL 299
Query: 190 SGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSF 248
+GH + G L A+ D A ++ + + L H I+ + F+P
Sbjct: 300 TGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNP---- 355
Query: 249 QKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKL 308
Q +L ++ + K+ I + G+ ++ S AF+ I++ S+D T ++
Sbjct: 356 QGNRL-LTGSSDKTARI-WDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKDNTCRI 413
Query: 309 W 309
W
Sbjct: 414 W 414
Score = 208 (78.3 bits), Expect = 6.5e-16, Sum P(2) = 6.5e-16
Identities = 58/217 (26%), Positives = 105/217 (48%)
Query: 105 HTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNP 164
H + +VA + ++ S D+T KLW+T + + +E GH + V + F+ N
Sbjct: 91 HILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLE-GHRNVVYAIAFN-NPYGD 148
Query: 165 IIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLND 224
I + +D+ K+W++ K GHT + ++ +P +L A+G D A LWD+
Sbjct: 149 KIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQS 208
Query: 225 GKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFR 283
G+ + TL H+ I +L F N S +I I+ + + + ++ + G+
Sbjct: 209 GEEVFTLTGHSAEIISLSF--NTSGNRI---ITGSFDHT-VTVWEADTGRKVYTLIGHCA 262
Query: 284 DVLSVAFSVDNRQIVSSSRDKTIKLWNTL-AHCKFTI 319
++ S F+ D I++ S DKT KLW+ + C T+
Sbjct: 263 EISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATL 299
Score = 53 (23.7 bits), Expect = 6.2e-23, Sum P(2) = 6.2e-23
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 349 SLAWSTDGQTLFAGYSDNTIRVWQ 372
S A++ G + G DNT R+W+
Sbjct: 392 SCAFNYKGDIIITGSKDNTCRIWR 415
Score = 50 (22.7 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 350 LAWSTDGQTLFAGYSDNTIRVW 371
++++ G L G SD T R+W
Sbjct: 351 ISFNPQGNRLLTGSSDKTARIW 372
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 249 (92.7 bits), Expect = 7.4e-21, Sum P(2) = 7.4e-21
Identities = 74/245 (30%), Positives = 115/245 (46%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
TL GH+G V ++ N + S S D T+ +W D+ G KRLKGH+ F++
Sbjct: 105 TLKGHSGAVMELHYNTD-GSMLFSASTDKTVAVW-----DSETGERVKRLKGHTSFVNSC 158
Query: 71 VLSSDG-NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKT 129
+ G +GS D T++LWD+ + F++ T VL+V F+ + QI+S D
Sbjct: 159 YPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQN-TYQVLAVTFNDTSDQIISGGIDND 217
Query: 130 IKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT------NC 183
IK+W+ L K T GH+D V+ + S + ++S D V+VW++ C
Sbjct: 218 IKVWD-LRQNKLTYTMRGHADSVTGLSLSS--EGSYLLSNAMDNTVRVWDVRPFAPKERC 274
Query: 184 KLKINHSGHTGYLNTVTVS--PDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITAL 240
+ H N + S PDGS A+G D +WD + L+ L H I +
Sbjct: 275 VKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGSINEV 334
Query: 241 CFSPN 245
F P+
Sbjct: 335 AFHPD 339
Score = 246 (91.7 bits), Expect = 6.4e-23, Sum P(2) = 6.4e-23
Identities = 64/212 (30%), Positives = 101/212 (47%)
Query: 12 LNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV 71
L+GH G V +P T+ S D +++W + D NY LKGHS + ++
Sbjct: 63 LSGHEGEVYCCKFHPN-GSTLASAGFDRLILLWNVYGDCDNYAT----LKGHSGAVMELH 117
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SSSRDKTI 130
++DG+ S S DKT+ +WD G+ +R + HT V S + Q+V + S D T+
Sbjct: 118 YNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTV 177
Query: 131 KLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS 190
KLW+ ++ + V V F N + I+S G D +KVW+L KL
Sbjct: 178 KLWDIRKKAAVQTFQNTYQ--VLAVTF--NDTSDQIISGGIDNDIKVWDLRQNKLTYTMR 233
Query: 191 GHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
GH + +++S +GS S D +WD+
Sbjct: 234 GHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Score = 181 (68.8 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 63/268 (23%), Positives = 120/268 (44%)
Query: 56 PQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAF 114
P L GH + +G+ S +D+ + LW++ + H+ V+ + +
Sbjct: 59 PIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHY 118
Query: 115 SVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWV-SCVRFSPNHQNPIIVSAGWDR 173
+ D + S+S DKT+ +W++ + ++ GH+ +V SC P + P +V G D
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRLK-GHTSFVNSCY---PARRGPQLVCTGSDD 174
Query: 174 -MVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV 232
VK+W++ K + +T + VT + SGG D + +WDL K +T+
Sbjct: 175 GTVKLWDIRK-KAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR 233
Query: 233 -HNDIITALCFSPNRSF-------QKIKL-DISRTLQKSNLILYPINHGKMETPFFSLFR 283
H D +T L S S+ +++ D+ K + I G + F +
Sbjct: 234 GHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCV--KIFQGNVHN--FE--K 287
Query: 284 DVLSVAFSVDNRQIVSSSRDKTIKLWNT 311
++L ++S D +I + S D+ + +W+T
Sbjct: 288 NLLRCSWSPDGSKIAAGSADRFVYVWDT 315
Score = 169 (64.5 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 47/225 (20%), Positives = 95/225 (42%)
Query: 3 TETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKG 62
+ET + L GH +V + P + + S D T+ +W + + V +
Sbjct: 139 SETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK---KAAVQTFQ--- 192
Query: 63 HSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 122
+++ + + + + +SG D +++WDL K T H V ++ S + ++
Sbjct: 193 NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLL 252
Query: 123 SSSRDKTIKLWNTLA-----HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKV 177
S++ D T+++W+ C + H+ + +R S + I + DR V V
Sbjct: 253 SNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYV 312
Query: 178 WNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
W+ T+ ++ GH G +N V PD + S D + ++
Sbjct: 313 WDTTSRRVLYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEI 357
Score = 167 (63.8 bits), Expect = 7.5e-13, Sum P(2) = 7.5e-13
Identities = 49/174 (28%), Positives = 79/174 (45%)
Query: 147 GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT-NCKLKINHSGHTGYLNTVTVSPDG 205
GH V C +F PN + SAG+DR++ +WN+ +C GH+G + + + DG
Sbjct: 65 GHEGEVYCCKFHPNGST--LASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDG 122
Query: 206 SLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNL 264
S+ S D +WD G+ + L H + + C+ R Q + K
Sbjct: 123 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRGPQLVCTGSDDGTVK--- 178
Query: 265 ILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFT 318
L+ I F + ++ VL+V F+ + QI+S D IK+W+ L K T
Sbjct: 179 -LWDIRKKAAVQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWD-LRQNKLT 229
Score = 68 (29.0 bits), Expect = 7.5e-13, Sum P(2) = 7.5e-13
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 320 VDLETKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQV 373
+D + K V +LR + ++ + + L+ S++G L + DNT+RVW V
Sbjct: 214 IDNDIK--VWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Score = 62 (26.9 bits), Expect = 6.4e-23, Sum P(2) = 6.4e-23
Identities = 22/94 (23%), Positives = 41/94 (43%)
Query: 285 VLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADP 344
V ++ S + ++S++ D T+++W+ + K+ ++ V K
Sbjct: 239 VTGLSLSSEGSYLLSNAMDNTVRVWD--------VRPFAPKERCVKIFQGNVHNFEKN-- 288
Query: 345 PMCLSLAWSTDGQTLFAGYSDNTIRVWQVSVTSR 378
L +WS DG + AG +D + VW TSR
Sbjct: 289 --LLRCSWSPDGSKIAAGSADRFVYVWDT--TSR 318
Score = 37 (18.1 bits), Expect = 7.4e-21, Sum P(2) = 7.4e-21
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 288 VAFSVDNRQIVSSSRDKTI 306
VAF D I+S+S DK +
Sbjct: 334 VAFHPDEPIILSASSDKRL 352
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 247 (92.0 bits), Expect = 7.8e-23, Sum P(2) = 7.8e-23
Identities = 64/212 (30%), Positives = 101/212 (47%)
Query: 12 LNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV 71
L+GH G V +P T+ S D +++W + D NY LKGHS + ++
Sbjct: 63 LSGHEGEVYCCKFHPN-GSTLASAGFDRLILLWSVYGDCDNYAT----LKGHSGAVMELH 117
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SSSRDKTI 130
++DG+ S S DKT+ +WD G+ +R + HT V S + Q+V + S D T+
Sbjct: 118 YNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTV 177
Query: 131 KLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS 190
KLW+ ++ + V V F N + I+S G D +KVW+L KL
Sbjct: 178 KLWDIRKKAAIQTFQNTYQ--VLAVTF--NDTSDQIISGGIDNDIKVWDLRQNKLTYTMR 233
Query: 191 GHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
GH + +++S +GS S D +WD+
Sbjct: 234 GHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Score = 223 (83.6 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 67/219 (30%), Positives = 103/219 (47%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
TL GH+G V ++ N + S S D T+ +W D+ G KRLKGH+ F++
Sbjct: 105 TLKGHSGAVMELHYNTD-GSMLFSASTDKTVAVW-----DSETGERVKRLKGHTSFVNSC 158
Query: 71 VLSSDG-NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKT 129
+ G +GS D T++LWD+ + F++ T VL+V F+ + QI+S D
Sbjct: 159 YPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQN-TYQVLAVTFNDTSDQIISGGIDND 217
Query: 130 IKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT------NC 183
IK+W+ L K T GH+D V+ + S + ++S D V+VW++ C
Sbjct: 218 IKVWD-LRQNKLTYTMRGHADSVTGLSLSS--EGSYLLSNAMDNTVRVWDVRPFAPKERC 274
Query: 184 KLKINHSGHTGYLNTVTVS--PDGSLCASGGKDMNAMLW 220
+ H N + S PDGS A+G D W
Sbjct: 275 VKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADSFLYPW 313
Score = 175 (66.7 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 64/270 (23%), Positives = 119/270 (44%)
Query: 56 PQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAF 114
P L GH + +G+ S +D+ + LW + + H+ V+ + +
Sbjct: 59 PIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWSVYGDCDNYATLKGHSGAVMELHY 118
Query: 115 SVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWV-SCVRFSPNHQNPIIVSAGWDR 173
+ D + S+S DKT+ +W++ + ++ GH+ +V SC P + P +V G D
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRLK-GHTSFVNSCY---PARRGPQLVCTGSDD 174
Query: 174 -MVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV 232
VK+W++ K I +T + VT + SGG D + +WDL K +T+
Sbjct: 175 GTVKLWDIRK-KAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR 233
Query: 233 -HNDIITALCFSPNRSF-------QKIKL-DISRTLQKSNLILYPINHGKMETPFFSLFR 283
H D +T L S S+ +++ D+ K + I G + F +
Sbjct: 234 GHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCV--KIFQGNVHN--FE--K 287
Query: 284 DVLSVAFSVDNRQIVSSSRDKTIKLWNTLA 313
++L ++S D +I + S D + W++L+
Sbjct: 288 NLLRCSWSPDGSKIAAGSADSFLYPWHSLS 317
Score = 161 (61.7 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 48/174 (27%), Positives = 79/174 (45%)
Query: 147 GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT-NCKLKINHSGHTGYLNTVTVSPDG 205
GH V C +F PN + SAG+DR++ +W++ +C GH+G + + + DG
Sbjct: 65 GHEGEVYCCKFHPNGST--LASAGFDRLILLWSVYGDCDNYATLKGHSGAVMELHYNTDG 122
Query: 206 SLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNL 264
S+ S D +WD G+ + L H + + C+ R Q + K
Sbjct: 123 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRGPQLVCTGSDDGTVK--- 178
Query: 265 ILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFT 318
L+ I F + ++ VL+V F+ + QI+S D IK+W+ L K T
Sbjct: 179 -LWDIRKKAAIQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWD-LRQNKLT 229
Score = 115 (45.5 bits), Expect = 0.00066, P = 0.00065
Identities = 28/132 (21%), Positives = 59/132 (44%)
Query: 3 TETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKG 62
+ET + L GH +V + P + + S D T+ +W + R Q
Sbjct: 139 SETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI-RKKAAIQTFQ----- 192
Query: 63 HSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 122
+++ + + + + +SG D +++WDL K T H V ++ S + ++
Sbjct: 193 NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLL 252
Query: 123 SSSRDKTIKLWN 134
S++ D T+++W+
Sbjct: 253 SNAMDNTVRVWD 264
Score = 68 (29.0 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 320 VDLETKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQV 373
+D + K V +LR + ++ + + L+ S++G L + DNT+RVW V
Sbjct: 214 IDNDIK--VWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Score = 60 (26.2 bits), Expect = 7.8e-23, Sum P(2) = 7.8e-23
Identities = 22/96 (22%), Positives = 43/96 (44%)
Query: 285 VLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADP 344
V ++ S + ++S++ D T+++W+ + K+ ++ V K
Sbjct: 239 VTGLSLSSEGSYLLSNAMDNTVRVWD--------VRPFAPKERCVKIFQGNVHNFEKN-- 288
Query: 345 PMCLSLAWSTDGQTLFAGYSDNTIRVWQ-VSVTSRG 379
L +WS DG + AG +D+ + W +SV S G
Sbjct: 289 --LLRCSWSPDGSKIAAGSADSFLYPWHSLSVRSLG 322
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 245 (91.3 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
Identities = 89/325 (27%), Positives = 144/325 (44%)
Query: 1 MSTETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKR- 59
+STET T GH WV I+ +P C ++ +++W D + G+ R
Sbjct: 143 LSTETPHF--TCKGHRHWVLSISWSPDGKKLASGC-KNGQVLLW-----DPSTGLQVGRT 194
Query: 60 LKGHSHFISDIV-----LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 114
L GHS +I+ + ++ + Y S S D ++R+WD AG+ R HT+ V + +
Sbjct: 195 LTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRW 254
Query: 115 SVDNRQIVSSSRDKTIKLWNTLAH----CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAG 170
D + S+S+D+TIK+W AH C+ T+ GH WV+ + S ++
Sbjct: 255 GGDGL-LYSASQDRTIKVWR--AHDGVLCR-TL--QGHGHWVNTMALSTDYALRTGAFEP 308
Query: 171 WDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWD-LNDGKHLH 229
+ V +L ++ + Y N V L SG D LW D K L
Sbjct: 309 AEATVNAQDLQGSLKELKERASSRY-NLVRGQGPERL-VSGSDDFTLFLWSPAEDKKPLA 366
Query: 230 TLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSV 288
+ H +I + FSP+ ++ S + KS + L+ GK V +
Sbjct: 367 RMTGHQALINQVLFSPDS-----RIVASASFDKS-IKLWDGRTGKYLASLRGHVAAVYQI 420
Query: 289 AFSVDNRQIVSSSRDKTIKLWNTLA 313
A+S D+R +VS S D T+K+W+ A
Sbjct: 421 AWSADSRLLVSGSSDSTLKVWDVKA 445
Score = 234 (87.4 bits), Expect = 3.7e-17, P = 3.7e-17
Identities = 51/150 (34%), Positives = 78/150 (52%)
Query: 29 PDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTL 88
P+ ++S S D TL +W D P R+ GH I+ ++ S D S S+DK++
Sbjct: 341 PERLVSGSDDFTLFLWSPAEDKK----PLARMTGHQALINQVLFSPDSRIVASASFDKSI 396
Query: 89 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGH 148
+LWD GK H V +A+S D+R +VS S D T+K+W+ A K GH
Sbjct: 397 KLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQ-KLATDLPGH 455
Query: 149 SDWVSCVRFSPNHQNPIIVSAGWDRMVKVW 178
+D V V +SP+ Q + S G D+ +++W
Sbjct: 456 ADEVYAVDWSPDGQR--VASGGKDKCLRIW 483
Score = 226 (84.6 bits), Expect = 5.6e-20, Sum P(2) = 5.6e-20
Identities = 54/188 (28%), Positives = 89/188 (47%)
Query: 60 LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 119
L+GHS + + S G Y SGS D T+R WDL+ + H VLS+++S D +
Sbjct: 110 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGK 169
Query: 120 QIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNP---IIVSAGWDRMVK 176
++ S ++ + LW+ + GHS W++ + + P H NP + S+ D V+
Sbjct: 170 KLASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVR 229
Query: 177 VWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HND 235
VW+ T + + +GHT + + DG L S +D +W +DG TL H
Sbjct: 230 VWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGHGH 288
Query: 236 IITALCFS 243
+ + S
Sbjct: 289 WVNTMALS 296
Score = 209 (78.6 bits), Expect = 7.2e-18, Sum P(2) = 7.2e-18
Identities = 59/204 (28%), Positives = 103/204 (50%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
+L GH+ V +A +P + S S D T+ W L+ + P KGH H++ I
Sbjct: 109 SLEGHSEAVISVAFSPT-GKYLASGSGDTTVRFWDLSTE-----TPHFTCKGHRHWVLSI 162
Query: 71 VLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAF-----SVDNRQIVSS 124
S DG SG + + LWD + G + R H+K + +++ + + R + SS
Sbjct: 163 SWSPDGKKLASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVASS 222
Query: 125 SRDKTIKLWNTLA-HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNC 183
S+D ++++W+T A C+ + GH+ V+C+R+ + ++ SA DR +KVW +
Sbjct: 223 SKDGSVRVWDTTAGRCERILT--GHTQSVTCLRWGGDG---LLYSASQDRTIKVWRAHDG 277
Query: 184 KLKINHSGHTGYLNTVTVSPDGSL 207
L GH ++NT+ +S D +L
Sbjct: 278 VLCRTLQGHGHWVNTMALSTDYAL 301
Score = 202 (76.2 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 67/240 (27%), Positives = 114/240 (47%)
Query: 12 LNGHNGWVTQIATNPKFPDTIL-SCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
L GH VT + D +L S S+D T+ +W+ D GV + L+GH H+++ +
Sbjct: 242 LTGHTQSVTCLRWGG---DGLLYSASQDRTIKVWR-AHD----GVLCRTLQGHGHWVNTM 293
Query: 71 VLSSDGNYAL-SGSWDK---TLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSR 126
LS+D YAL +G+++ T+ DL + + ++ ++ ++VS S
Sbjct: 294 ALSTD--YALRTGAFEPAEATVNAQDLQG--SLKELKERASSRYNLVRGQGPERLVSGSD 349
Query: 127 DKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLK 186
D T+ LW+ K GH ++ V FSP+ + I+ SA +D+ +K+W+ K
Sbjct: 350 DFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSR--IVASASFDKSIKLWDGRTGKYL 407
Query: 187 INHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPN 245
+ GH + + S D L SG D +WD+ K L H D + A+ +SP+
Sbjct: 408 ASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLATDLPGHADEVYAVDWSPD 467
Score = 142 (55.0 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 41/155 (26%), Positives = 73/155 (47%)
Query: 94 AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCK-FTIVEDGHSDWV 152
A + T E H++ V+SVAFS + + S S D T++ W+ FT GH WV
Sbjct: 102 AVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTC--KGHRHWV 159
Query: 153 SCVRFSPNHQNPIIVSAGWDRMVKVWN-LTNCKLKINHSGHTGYLNTVT-----VSPDGS 206
+ +SP+ + + S + V +W+ T ++ +GH+ ++ ++ ++P+
Sbjct: 160 LSISWSPDGKK--LASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEPLHMNPECR 217
Query: 207 LCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITAL 240
AS KD + +WD G+ L H +T L
Sbjct: 218 YVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCL 252
Score = 101 (40.6 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 35/155 (22%), Positives = 72/155 (46%)
Query: 166 IVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDG 225
+ S D V+ W+L+ GH ++ +++ SPDG ASG K+ +LWD + G
Sbjct: 129 LASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQVLLWDPSTG 188
Query: 226 KHL-HTLVHNDIITALCFSPNRSFQKIKLD-----ISRTLQKSNLILYPINHGKMETPFF 279
+ TL + + S++ + ++ ++ + + ++ ++ G+ E
Sbjct: 189 LQVGRTLTGHSK-----WITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERILT 243
Query: 280 SLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAH 314
+ V + + D + S+S+D+TIK+W AH
Sbjct: 244 GHTQSVTCLRWGGDGL-LYSASQDRTIKVWR--AH 275
Score = 74 (31.1 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 350 LAWSTDGQTLFAGYSDNTIRVWQV 373
+AWS D + L +G SD+T++VW V
Sbjct: 420 IAWSADSRLLVSGSSDSTLKVWDV 443
Score = 63 (27.2 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 334 DVVSQSTKADPP----MCLSLAWSTDGQTLFAGYSDNTIRVWQ 372
DV +Q D P ++ WS DGQ + +G D +R+W+
Sbjct: 442 DVKAQKLATDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIWR 484
Score = 53 (23.7 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 350 LAWSTDGQTLFAGYSDNTIRVWQ 372
L W DG L++ D TI+VW+
Sbjct: 252 LRWGGDG-LLYSASQDRTIKVWR 273
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 249 (92.7 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 64/212 (30%), Positives = 103/212 (48%)
Query: 12 LNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV 71
L+GH G V +P + +T+ S D +++W + D NY LKGHS + ++
Sbjct: 89 LSGHEGEVYCCKFHP-WGNTLASAGFDRLILLWNVYGDCDNYAT----LKGHSGAVMELH 143
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SSSRDKTI 130
++DG+ S S DKT+ +WD G+ +R + HT V S + Q+V + S D T+
Sbjct: 144 YNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTV 203
Query: 131 KLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS 190
KLW+ ++ + V V F N + I+S G D +KVW+L KL
Sbjct: 204 KLWDIRKKAAVQTFQNTYQ--VLAVTF--NDTSDQIISGGIDNDIKVWDLRQNKLTYTMR 259
Query: 191 GHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
GH + +++S +GS S D +WD+
Sbjct: 260 GHADSVTGLSLSSEGSYLLSNAMDNTVRIWDV 291
Score = 248 (92.4 bits), Expect = 2.3e-19, P = 2.3e-19
Identities = 73/244 (29%), Positives = 113/244 (46%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
TL GH+G V ++ N + S S D T+ +W D+ G KRLKGH+ F++
Sbjct: 131 TLKGHSGAVMELHYNTD-GSMLFSASTDKTVAVW-----DSETGERVKRLKGHTSFVNSC 184
Query: 71 VLSSDG-NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKT 129
+ G +GS D T++LWD+ + F++ T VL+V F+ + QI+S D
Sbjct: 185 YPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQN-TYQVLAVTFNDTSDQIISGGIDND 243
Query: 130 IKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT------NC 183
IK+W+ L K T GH+D V+ + S + ++S D V++W++ C
Sbjct: 244 IKVWD-LRQNKLTYTMRGHADSVTGLSLSS--EGSYLLSNAMDNTVRIWDVRPFAPKERC 300
Query: 184 KLKINHSGHTGYLNTVTVS--PDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITAL 240
+ H N + S PDGS A G D +WD + L+ L H + L
Sbjct: 301 VKIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYVWDTTSRRILYKLPGHAGSVNEL 360
Query: 241 CFSP 244
F P
Sbjct: 361 AFHP 364
Score = 181 (68.8 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 64/268 (23%), Positives = 118/268 (44%)
Query: 56 PQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAF 114
P L GH + GN S +D+ + LW++ + H+ V+ + +
Sbjct: 85 PIMLLSGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHY 144
Query: 115 SVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWV-SCVRFSPNHQNPIIVSAGWDR 173
+ D + S+S DKT+ +W++ + ++ GH+ +V SC P + P +V G D
Sbjct: 145 NTDGSMLFSASTDKTVAVWDSETGERVKRLK-GHTSFVNSCY---PARRGPQLVCTGSDD 200
Query: 174 -MVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV 232
VK+W++ K + +T + VT + SGG D + +WDL K +T+
Sbjct: 201 GTVKLWDIRK-KAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR 259
Query: 233 -HNDIITALCFSPNRSF-------QKIKL-DISRTLQKSNLILYPINHGKMETPFFSLFR 283
H D +T L S S+ +++ D+ K + I G + F +
Sbjct: 260 GHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCV--KIFQGNVHN--FE--K 313
Query: 284 DVLSVAFSVDNRQIVSSSRDKTIKLWNT 311
++L ++S D +I S D+ + +W+T
Sbjct: 314 NLLRCSWSPDGSKIAGGSADRFVYVWDT 341
Score = 162 (62.1 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 45/225 (20%), Positives = 94/225 (41%)
Query: 3 TETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKG 62
+ET + L GH +V + P + + S D T+ +W + + V +
Sbjct: 165 SETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK---KAAVQTFQ--- 218
Query: 63 HSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 122
+++ + + + + +SG D +++WDL K T H V ++ S + ++
Sbjct: 219 NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLL 278
Query: 123 SSSRDKTIKLWNTLA-----HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKV 177
S++ D T+++W+ C + H+ + +R S + I DR V V
Sbjct: 279 SNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYV 338
Query: 178 WNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
W+ T+ ++ GH G +N + P+ + S D + ++
Sbjct: 339 WDTTSRRILYKLPGHAGSVNELAFHPEEPIILSASSDKRLYMGEI 383
Score = 158 (60.7 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 48/174 (27%), Positives = 78/174 (44%)
Query: 147 GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT-NCKLKINHSGHTGYLNTVTVSPDG 205
GH V C +F P + SAG+DR++ +WN+ +C GH+G + + + DG
Sbjct: 91 GHEGEVYCCKFHP--WGNTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDG 148
Query: 206 SLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNL 264
S+ S D +WD G+ + L H + + C+ R Q + K
Sbjct: 149 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRGPQLVCTGSDDGTVK--- 204
Query: 265 ILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFT 318
L+ I F + ++ VL+V F+ + QI+S D IK+W+ L K T
Sbjct: 205 -LWDIRKKAAVQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWD-LRQNKLT 255
Score = 67 (28.6 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 15/54 (27%), Positives = 29/54 (53%)
Query: 320 VDLETKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQV 373
+D + K V +LR + ++ + + L+ S++G L + DNT+R+W V
Sbjct: 240 IDNDIK--VWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDV 291
Score = 59 (25.8 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 21/94 (22%), Positives = 40/94 (42%)
Query: 285 VLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADP 344
V ++ S + ++S++ D T+++W+ + K+ ++ V K
Sbjct: 265 VTGLSLSSEGSYLLSNAMDNTVRIWD--------VRPFAPKERCVKIFQGNVHNFEKN-- 314
Query: 345 PMCLSLAWSTDGQTLFAGYSDNTIRVWQVSVTSR 378
L +WS DG + G +D + VW TSR
Sbjct: 315 --LLRCSWSPDGSKIAGGSADRFVYVWDT--TSR 344
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 275 (101.9 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 80/262 (30%), Positives = 126/262 (48%)
Query: 60 LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 119
L GHS + + L N SGS+D T+RLW+LA + E H+ V + F D
Sbjct: 269 LSGHSDGVMCLQLVR--NILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQF--DQC 324
Query: 120 QIVSSSRDKTIKLWN-TLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVW 178
+++S S DKTI++WN + C +I+ GH+D V C+ F + ++VS D VK+W
Sbjct: 325 KLISGSMDKTIRIWNYRTSEC-ISILH-GHTDSVLCLTFD----STLLVSGSADCTVKLW 378
Query: 179 NLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTL-VHNDII 237
+ + K +I GHTG +N+V + D L SG D +W L LHT H +
Sbjct: 379 HFSGGK-RITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPV 437
Query: 238 TALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQI 297
+L + +R F LD T+++ + I K F V +A D+ ++
Sbjct: 438 QSLALADSRLFS-CSLD--GTIKQ-----WDIEKKKCVHTLFGHIEGVWEIA--ADHLRL 487
Query: 298 VSSSRDKTIKLWNTLAHCKFTI 319
+S + D +K+W C T+
Sbjct: 488 ISGAHDGVVKVWEA-CECVHTL 508
Score = 163 (62.4 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 61/215 (28%), Positives = 98/215 (45%)
Query: 12 LNGHNGWVTQIATNPKFPDTIL-SCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
L+GH V + F T+L S S D T+ +W + G + L+GH+ ++ +
Sbjct: 349 LHGHTDSVLCLT----FDSTLLVSGSADCTVKLWHFS------GGKRITLRGHTGPVNSV 398
Query: 71 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 130
+ D LSGS D T+++W L F H V S+A + D+R + S S D TI
Sbjct: 399 RIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLALA-DSR-LFSCSLDGTI 456
Query: 131 KLWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINH 189
K W+ C T+ GH + V + +H ++S D +VKVW C + +
Sbjct: 457 KQWDIEKKKCVHTLF--GHIEGVW--EIAADHLR--LISGAHDGVVKVWEACECVHTLKN 510
Query: 190 SGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLND 224
H+ + +V + D + SG +D LW N+
Sbjct: 511 --HSEPVTSVALG-DCEV-VSGSEDGKIYLWLFNN 541
>FB|FBgn0027524 [details] [associations]
symbol:CG3909 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GeneTree:ENSGT00700000104507 KO:K12602 EMBL:AF132174
RefSeq:NP_649969.1 UniGene:Dm.3198 SMR:Q9XZ19 IntAct:Q9XZ19
MINT:MINT-1753051 STRING:Q9XZ19 EnsemblMetazoa:FBtr0082172
GeneID:41226 KEGG:dme:Dmel_CG3909 UCSC:CG3909-RA
FlyBase:FBgn0027524 InParanoid:Q9XZ19 OMA:HETWVEC OrthoDB:EOG4R7SSH
GenomeRNAi:41226 NextBio:822821 Uniprot:Q9XZ19
Length = 331
Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 76/252 (30%), Positives = 122/252 (48%)
Query: 77 NYALSGSWDKTLRLWDLAAGKTTR---RFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLW 133
++ ++G D +++WDL T + + + H V+SVA S D + I SSS D T+ LW
Sbjct: 53 DFLVTGGLDDLVKVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQTIASSSLDSTMCLW 112
Query: 134 NTLAHCKFTIVEDGHSD-WVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGH 192
+ + K ++ G D W V+FSP N ++S D + ++++ K +
Sbjct: 113 DARSGDKKHLLSFGPVDLWT--VQFSPC--NKYVISGLNDGKISMYSVETGKAEQTLDAQ 168
Query: 193 TG-YLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQK 250
G Y ++ SPDG ASG D ++D+ GK + TL H + +LCFSPN +
Sbjct: 169 NGKYTLSIAYSPDGKYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSPN---SQ 225
Query: 251 IKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWN 310
+ L S ++ LY + H + VL VAFS D + SSS D ++K+W+
Sbjct: 226 LLLTAS---DDGHMKLYDVTHSDVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIWD 282
Query: 311 TLAH-CKFTIVD 321
T C T +
Sbjct: 283 TSERKCLHTFAE 294
Score = 236 (88.1 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 70/242 (28%), Positives = 117/242 (48%)
Query: 5 TLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHS 64
TL+LR L GH V +A + TI S S D+T+ +W D G + L
Sbjct: 74 TLKLRHKLKGHALGVVSVAVSSD-GQTIASSSLDSTMCLW-----DARSGDKKHLLSFGP 127
Query: 65 HFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFE-DHTKDVLSVAFSVDNRQIVS 123
+ + S Y +SG D + ++ + GK + + + K LS+A+S D + I S
Sbjct: 128 VDLWTVQFSPCNKYVISGLNDGKISMYSVETGKAEQTLDAQNGKYTLSIAYSPDGKYIAS 187
Query: 124 SSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNC 183
+ D I +++ A K +GH+ V + FSPN Q ++++A D +K++++T+
Sbjct: 188 GAIDGIITIFDVAAG-KVVQTLEGHAMPVRSLCFSPNSQ--LLLTASDDGHMKLYDVTHS 244
Query: 184 KLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCF 242
+ SGH ++ V S DG AS D + +WD ++ K LHT H D + + +
Sbjct: 245 DVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIWDTSERKCLHTFAEHTDQVWGVRY 304
Query: 243 SP 244
SP
Sbjct: 305 SP 306
Score = 191 (72.3 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 63/286 (22%), Positives = 128/286 (44%)
Query: 26 PKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWD 85
PK D +++ D+ + +W L D+T + +LKGH+ + + +SSDG S S D
Sbjct: 51 PK--DFLVTGGLDDLVKVWDLQEDNTLK--LRHKLKGHALGVVSVAVSSDGQTIASSSLD 106
Query: 86 KTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVE 145
T+ LWD +G D+ +V FS N+ ++S D I +++ ++
Sbjct: 107 STMCLWDARSGDKKHLLSFGPVDLWTVQFSPCNKYVISGLNDGKISMYSVETGKAEQTLD 166
Query: 146 DGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDG 205
+ + + +SP+ + I S D ++ ++++ K+ GH + ++ SP+
Sbjct: 167 AQNGKYTLSIAYSPDGK--YIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSPNS 224
Query: 206 SLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPN-RSFQKIKLDISRTLQKSN 263
L + D + L+D+ + TL H + + FS + + F D ++
Sbjct: 225 QLLLTASDDGHMKLYDVTHSDVVGTLSGHASWVLCVAFSEDGKHFASSSSD-------NS 277
Query: 264 LILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLW 309
+ ++ + K F V V +S N ++ S+S DK++ ++
Sbjct: 278 VKIWDTSERKCLHTFAEHTDQVWGVRYSPGNDKVASASEDKSLNIY 323
Score = 174 (66.3 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 55/179 (30%), Positives = 84/179 (46%)
Query: 2 STETLQLRGTLNGHNGWVT-QIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRL 60
S ET + TL+ NG T IA +P I S + D + I+ D G + L
Sbjct: 155 SVETGKAEQTLDAQNGKYTLSIAYSPD-GKYIASGAIDGIITIF-----DVAAGKVVQTL 208
Query: 61 KGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ 120
+GH+ + + S + L+ S D ++L+D+ H VL VAFS D +
Sbjct: 209 EGHAMPVRSLCFSPNSQLLLTASDDGHMKLYDVTHSDVVGTLSGHASWVLCVAFSEDGKH 268
Query: 121 IVSSSRDKTIKLWNTLAH-CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVW 178
SSS D ++K+W+T C T E H+D V VR+SP N + SA D+ + ++
Sbjct: 269 FASSSSDNSVKIWDTSERKCLHTFAE--HTDQVWGVRYSPG--NDKVASASEDKSLNIY 323
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 248 (92.4 bits), Expect = 3.6e-19, P = 3.6e-19
Identities = 74/245 (30%), Positives = 115/245 (46%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
TL GH+G V ++ N + S S D T+ +W D+ G KRLKGH+ F++
Sbjct: 104 TLKGHSGAVMELHYNTD-GSMLFSASTDKTVAVW-----DSETGERVKRLKGHTSFVNSC 157
Query: 71 VLSSDG-NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKT 129
+ G +GS D T++LWD+ + F++ T VL+V F+ + QI+S D
Sbjct: 158 YPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQN-TYQVLAVTFNDTSDQIISGGIDND 216
Query: 130 IKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT------NC 183
IK+W+ L K T GH+D V+ + S + ++S D V+VW++ C
Sbjct: 217 IKVWD-LRQNKLTYTMRGHADSVTGLSLSS--EGSYLLSNAMDNTVRVWDVRPFAPKERC 273
Query: 184 KLKINHSGHTGYLNTVTVS--PDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITAL 240
+ H N + S PDGS A+G D +WD + L+ L H I +
Sbjct: 274 VKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEV 333
Query: 241 CFSPN 245
F P+
Sbjct: 334 AFHPD 338
Score = 247 (92.0 bits), Expect = 4.4e-22, Sum P(2) = 4.4e-22
Identities = 64/212 (30%), Positives = 101/212 (47%)
Query: 12 LNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV 71
L+GH G V +P T+ S D +++W + D NY LKGHS + ++
Sbjct: 62 LSGHEGEVYCCKFHPN-GSTLASAGFDRLILLWNVYGDCDNYAT----LKGHSGAVMELH 116
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SSSRDKTI 130
++DG+ S S DKT+ +WD G+ +R + HT V S + Q+V + S D T+
Sbjct: 117 YNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTV 176
Query: 131 KLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS 190
KLW+ ++ + V V F N + I+S G D +KVW+L KL
Sbjct: 177 KLWDIRKKAAIQTFQNTYQ--VLAVTF--NDTSDQIISGGIDNDIKVWDLRQNKLTYTMR 232
Query: 191 GHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
GH + +++S +GS S D +WD+
Sbjct: 233 GHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 264
Score = 182 (69.1 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 64/268 (23%), Positives = 120/268 (44%)
Query: 56 PQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAF 114
P L GH + +G+ S +D+ + LW++ + H+ V+ + +
Sbjct: 58 PIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHY 117
Query: 115 SVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWV-SCVRFSPNHQNPIIVSAGWDR 173
+ D + S+S DKT+ +W++ + ++ GH+ +V SC P + P +V G D
Sbjct: 118 NTDGSMLFSASTDKTVAVWDSETGERVKRLK-GHTSFVNSCY---PARRGPQLVCTGSDD 173
Query: 174 -MVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV 232
VK+W++ K I +T + VT + SGG D + +WDL K +T+
Sbjct: 174 GTVKLWDIRK-KAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR 232
Query: 233 -HNDIITALCFSPNRSF-------QKIKL-DISRTLQKSNLILYPINHGKMETPFFSLFR 283
H D +T L S S+ +++ D+ K + I G + F +
Sbjct: 233 GHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCV--KIFQGNVHN--FE--K 286
Query: 284 DVLSVAFSVDNRQIVSSSRDKTIKLWNT 311
++L ++S D +I + S D+ + +W+T
Sbjct: 287 NLLRCSWSPDGSKIAAGSADRFVYVWDT 314
Score = 166 (63.5 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 49/174 (28%), Positives = 79/174 (45%)
Query: 147 GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT-NCKLKINHSGHTGYLNTVTVSPDG 205
GH V C +F PN + SAG+DR++ +WN+ +C GH+G + + + DG
Sbjct: 64 GHEGEVYCCKFHPNGST--LASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDG 121
Query: 206 SLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNL 264
S+ S D +WD G+ + L H + + C+ R Q + K
Sbjct: 122 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRGPQLVCTGSDDGTVK--- 177
Query: 265 ILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFT 318
L+ I F + ++ VL+V F+ + QI+S D IK+W+ L K T
Sbjct: 178 -LWDIRKKAAIQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWD-LRQNKLT 228
Score = 166 (63.5 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 47/214 (21%), Positives = 91/214 (42%)
Query: 3 TETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKG 62
+ET + L GH +V + P + + S D T+ +W + R Q
Sbjct: 138 SETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI-RKKAAIQTFQ----- 191
Query: 63 HSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 122
+++ + + + + +SG D +++WDL K T H V ++ S + ++
Sbjct: 192 NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLL 251
Query: 123 SSSRDKTIKLWNTLA-----HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKV 177
S++ D T+++W+ C + H+ + +R S + I + DR V V
Sbjct: 252 SNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYV 311
Query: 178 WNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASG 211
W+ T+ ++ GH G +N V PD + +G
Sbjct: 312 WDTTSRRILYKLPGHAGSINEVAFHPDEPIIETG 345
Score = 68 (29.0 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 320 VDLETKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQV 373
+D + K V +LR + ++ + + L+ S++G L + DNT+RVW V
Sbjct: 213 IDNDIK--VWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 264
Score = 62 (26.9 bits), Expect = 4.4e-22, Sum P(2) = 4.4e-22
Identities = 22/94 (23%), Positives = 41/94 (43%)
Query: 285 VLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADP 344
V ++ S + ++S++ D T+++W+ + K+ ++ V K
Sbjct: 238 VTGLSLSSEGSYLLSNAMDNTVRVWD--------VRPFAPKERCVKIFQGNVHNFEKN-- 287
Query: 345 PMCLSLAWSTDGQTLFAGYSDNTIRVWQVSVTSR 378
L +WS DG + AG +D + VW TSR
Sbjct: 288 --LLRCSWSPDGSKIAAGSADRFVYVWDT--TSR 317
>POMBASE|SPAC227.12 [details] [associations]
symbol:SPAC227.12 "U4/U6 x U5 tri-snRNP complex subunit
Prp4 family (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=ISS] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 PomBase:SPAC227.12
GO:GO:0005829 EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0046540 HSSP:P16649 GO:GO:0045292
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
OMA:CKIWDLR OrthoDB:EOG4V1B90 PIR:T50168 RefSeq:NP_592966.1
ProteinModelPortal:Q9UTC7 IntAct:Q9UTC7 STRING:Q9UTC7
EnsemblFungi:SPAC227.12.1 GeneID:2541477 KEGG:spo:SPAC227.12
NextBio:20802576 Uniprot:Q9UTC7
Length = 462
Score = 271 (100.5 bits), Expect = 4.8e-22, P = 4.8e-22
Identities = 76/223 (34%), Positives = 112/223 (50%)
Query: 2 STETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLK 61
S T LR L GH V ++A +P D ++S S D T +W D + GV +
Sbjct: 253 SQSTPLLR--LEGHLARVGRVAFHPS-GDYLVSASFDTTWRLW-----DVHTGVELLMQE 304
Query: 62 GHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 121
GHS I I DG+ SG D R+WDL +GK+ ++H + ++++A+S + Q+
Sbjct: 305 GHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQL 364
Query: 122 VSSSRDKTIKLWN----TLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKV 177
+SS D T+K+W+ +LAH TI HS VS VR+ + N I ++G+D VK+
Sbjct: 365 ATSSADDTVKIWDLRKVSLAH---TI--PAHSSLVSDVRYIESGVNRFIATSGYDGCVKL 419
Query: 178 WNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLW 220
WN NC L + GH ++V G S G D LW
Sbjct: 420 WNPLNCSLIKSMVGHEE--KVMSVDGYGDRFISSGYDRTIKLW 460
Score = 247 (92.0 bits), Expect = 8.5e-19, P = 8.5e-19
Identities = 82/274 (29%), Positives = 128/274 (46%)
Query: 67 ISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV-------LSVAFSVDNR 119
I+ + S++GN+ SGSW +++W+ + F HT V L A+ D+
Sbjct: 175 IAIVRFSNNGNHFASGSWGGQVKVWNSDNLSEVQLFRGHTDRVSGLDWYPLCQAWDADSE 234
Query: 120 QIV--SSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKV 177
Q+ + + D T+ LW +E GH V V F P+ +VSA +D ++
Sbjct: 235 QLTLATGAADNTVCLWKASQSTPLLRLE-GHLARVGRVAFHPS--GDYLVSASFDTTWRL 291
Query: 178 WNL-TNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTL-VHND 235
W++ T +L + GH+ + ++ PDGSL +SGG D +WDL GK + L H
Sbjct: 292 WDVHTGVEL-LMQEGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIR 350
Query: 236 IITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNR 295
I A+ +SPN +Q T++ +L + H SL DV + V NR
Sbjct: 351 QIVAMAWSPN-GYQLATSSADDTVKIWDLRKVSLAH--TIPAHSSLVSDVRYIESGV-NR 406
Query: 296 QIVSSSRDKTIKLWNTLAHCKF--TIVDLETKKM 327
I +S D +KLWN L +C ++V E K M
Sbjct: 407 FIATSGYDGCVKLWNPL-NCSLIKSMVGHEEKVM 439
Score = 201 (75.8 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 56/196 (28%), Positives = 89/196 (45%)
Query: 31 TILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRL 90
T+ + + DNT+ +WK ++ P RL+GH + + G+Y +S S+D T RL
Sbjct: 237 TLATGAADNTVCLWKASQS-----TPLLRLEGHLARVGRVAFHPSGDYLVSASFDTTWRL 291
Query: 91 WDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSD 150
WD+ G E H++ + S+A D + S D ++W+ L K +V D H
Sbjct: 292 WDVHTGVELLMQEGHSEGIFSIACQPDGSLVSSGGNDAIGRIWD-LRSGKSIMVLDEHIR 350
Query: 151 WVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDG--SLC 208
+ + +SPN SA D VK+W+L L H+ ++ V G
Sbjct: 351 QIVAMAWSPNGYQLATSSA--DDTVKIWDLRKVSLAHTIPAHSSLVSDVRYIESGVNRFI 408
Query: 209 ASGGKDMNAMLWD-LN 223
A+ G D LW+ LN
Sbjct: 409 ATSGYDGCVKLWNPLN 424
Score = 177 (67.4 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 60/236 (25%), Positives = 108/236 (45%)
Query: 81 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCK 140
+G+ D T+ LW + R E H V VAF +VS+S D T +LW+ +
Sbjct: 240 TGAADNTVCLWKASQSTPLLRLEGHLARVGRVAFHPSGDYLVSASFDTTWRLWDVHTGVE 299
Query: 141 FTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVT 200
++++GHS+ + + P+ ++ S G D + ++W+L + K + H + +
Sbjct: 300 L-LMQEGHSEGIFSIACQPD--GSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMA 356
Query: 201 VSPDGSLCASGGKDMNAMLWDLNDGKHLHTL-VHNDIITALCFSPNRSFQKIKLDISRTL 259
SP+G A+ D +WDL HT+ H+ +++ + + I+ ++R +
Sbjct: 357 WSPNGYQLATSSADDTVKIWDLRKVSLAHTIPAHSSLVSDVRY--------IESGVNRFI 408
Query: 260 QKSNLILYPINHGKMETPF-FSLFRDVLS---VAFSVDNR--QIVSSSRDKTIKLW 309
S Y K+ P SL + ++ SVD + +SS D+TIKLW
Sbjct: 409 ATSG---YD-GCVKLWNPLNCSLIKSMVGHEEKVMSVDGYGDRFISSGYDRTIKLW 460
Score = 138 (53.6 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 49/220 (22%), Positives = 91/220 (41%)
Query: 107 KDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVS-------CVRFSP 159
+ + V FS + S S +K+WN+ + + GH+D VS C +
Sbjct: 173 RPIAIVRFSNNGNHFASGSWGGQVKVWNSDNLSEVQLFR-GHTDRVSGLDWYPLCQAWDA 231
Query: 160 NHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAML 219
+ + + + D V +W + + GH + V P G S D L
Sbjct: 232 DSEQLTLATGAADNTVCLWKASQSTPLLRLEGHLARVGRVAFHPSGDYLVSASFDTTWRL 291
Query: 220 WDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPF 278
WD++ G L H++ I ++ P+ S +S + ++ + GK
Sbjct: 292 WDVHTGVELLMQEGHSEGIFSIACQPDGSL------VSSGGNDAIGRIWDLRSGKSIMVL 345
Query: 279 FSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWN----TLAH 314
R ++++A+S + Q+ +SS D T+K+W+ +LAH
Sbjct: 346 DEHIRQIVAMAWSPNGYQLATSSADDTVKIWDLRKVSLAH 385
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 273 (101.2 bits), Expect = 4.9e-22, P = 4.9e-22
Identities = 80/256 (31%), Positives = 120/256 (46%)
Query: 66 FISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSS 125
+I + S DGNY +G+ DKT+++WD+ K F H D+ S+ +S D R IVS S
Sbjct: 329 YIRSVCFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGS 388
Query: 126 RDKTIKLWNT-LAHCKFTI--VEDGHSDWVSCVRFSPNHQNPIIVSAG-WDRMVKVWNLT 181
DK K+W+ C FT+ E G + V+ V SP+ + +V+AG D +V++W+
Sbjct: 389 GDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGR---LVAAGSLDNIVRLWDAQ 445
Query: 182 NCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-----HNDI 236
+ GH + +V SPDG ASG D + LWDL+ + H D
Sbjct: 446 TGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDF 505
Query: 237 ITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQ 296
+ ++ FSP+ S+ IS + +S P N G V+SVA S N
Sbjct: 506 VLSVAFSPDGSWL-----ISGSKDRSVQFWDPRN-GTTHMMLQGHKNSVISVALSPKNNS 559
Query: 297 ---IVSSSRDKTIKLW 309
+ S D +LW
Sbjct: 560 HGVFATGSGDFRSRLW 575
Score = 253 (94.1 bits), Expect = 3.0e-19, P = 3.0e-19
Identities = 66/226 (29%), Positives = 113/226 (50%)
Query: 5 TLQLRGTLNGHNGWVTQI--ATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKG 62
T +++ T GH + + +++ +F I+S S D IW + + + + + + G
Sbjct: 358 TKKIQHTFYGHELDIYSLDYSSDGRF---IVSGSGDKKAKIWDIEKGKCAFTLGNEEV-G 413
Query: 63 HSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 122
+ ++ + +S DG +GS D +RLWD G R+E H V SVAFS D + +
Sbjct: 414 PKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLA 473
Query: 123 SSSRDKTIKLWN-----TLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKV 177
S S DK++KLW+ + + C+ T +GH D+V V FSP+ ++S DR V+
Sbjct: 474 SGSLDKSLKLWDLSGSRSRSRCRATF--NGHKDFVLSVAFSPD--GSWLISGSKDRSVQF 529
Query: 178 WNLTNCKLKINHSGHTGYLNTVTVSPDGS---LCASGGKDMNAMLW 220
W+ N + GH + +V +SP + + A+G D + LW
Sbjct: 530 WDPRNGTTHMMLQGHKNSVISVALSPKNNSHGVFATGSGDFRSRLW 575
Score = 251 (93.4 bits), Expect = 5.2e-19, P = 5.2e-19
Identities = 77/274 (28%), Positives = 133/274 (48%)
Query: 51 TNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT-KD- 108
TN + H+ + + S+DG Y +G +++ +++D+ GK F D + KD
Sbjct: 268 TNLNIDLLHNLQHNSVVCCVNFSNDGKYLATGC-NRSAQIYDVDTGKKVHAFVDESEKDG 326
Query: 109 ---VLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPI 165
+ SV FS D + + + DKT+K+W+ K GH + + +S + +
Sbjct: 327 DLYIRSVCFSPDGNYLATGAEDKTVKVWDIHTK-KIQHTFYGHELDIYSLDYSSDGR--F 383
Query: 166 IVSAGWDRMVKVWNLTN--CKLKINHS--GHTGYLNTVTVSPDGSLCASGGKDMNAMLWD 221
IVS D+ K+W++ C + + G + +V +SPDG L A+G D LWD
Sbjct: 384 IVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWD 443
Query: 222 LNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFS 280
G L H D + ++ FSP+ K S +L KS L L+ ++ + + +
Sbjct: 444 AQTGYFLERYEGHLDSVYSVAFSPDG-----KSLASGSLDKS-LKLWDLSGSRSRSRCRA 497
Query: 281 LF---RD-VLSVAFSVDNRQIVSSSRDKTIKLWN 310
F +D VLSVAFS D ++S S+D++++ W+
Sbjct: 498 TFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWD 531
Score = 190 (71.9 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 69/277 (24%), Positives = 122/277 (44%)
Query: 105 HTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKF-TIVEDGHSD---WVSCVRFSPN 160
H V V FS D + + + +++ ++++ K V++ D ++ V FSP+
Sbjct: 280 HNSVVCCVNFSNDGKYLATGC-NRSAQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPD 338
Query: 161 HQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLW 220
+ + D+ VKVW++ K++ GH + ++ S DG SG D A +W
Sbjct: 339 GN--YLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIW 396
Query: 221 DLNDGKHLHTLVHNDI-----ITALCFSPNRSFQKIKLDISRTLQKSNLI-LYPINHGKM 274
D+ GK TL + ++ +T++ SP+ +L + +L N++ L+ G
Sbjct: 397 DIEKGKCAFTLGNEEVGPKNGVTSVAMSPDG-----RLVAAGSLD--NIVRLWDAQTGYF 449
Query: 275 ETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELRPD 334
+ V SVAFS D + + S S DK++KLW DL + R
Sbjct: 450 LERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLW-----------DLSGSRSRSRCRA- 497
Query: 335 VVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVW 371
+ LS+A+S DG L +G D +++ W
Sbjct: 498 ----TFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFW 530
Score = 161 (61.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 56/199 (28%), Positives = 98/199 (49%)
Query: 181 TNCKLKINHS-GHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHN----- 234
TN + + H+ H + V S DG A+G + +A ++D++ GK +H V
Sbjct: 268 TNLNIDLLHNLQHNSVVCCVNFSNDGKYLATGC-NRSAQIYDVDTGKKVHAFVDESEKDG 326
Query: 235 DI-ITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVD 293
D+ I ++CFSP+ ++ ++ + + ++ I+ K++ F+ D+ S+ +S D
Sbjct: 327 DLYIRSVCFSPDGNY------LATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSD 380
Query: 294 NRQIVSSSRDKTIKLWNT-LAHCKFTIVDLETKKMVEELRPDVVSQSTKADPPMCLSLAW 352
R IVS S DK K+W+ C FT+ + EE+ P + T S+A
Sbjct: 381 GRFIVSGSGDKKAKIWDIEKGKCAFTLGN-------EEVGPK--NGVT--------SVAM 423
Query: 353 STDGQTLFAGYSDNTIRVW 371
S DG+ + AG DN +R+W
Sbjct: 424 SPDGRLVAAGSLDNIVRLW 442
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 274 (101.5 bits), Expect = 5.4e-22, P = 5.4e-22
Identities = 69/213 (32%), Positives = 109/213 (51%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
+L GH G V + A P+ + +LSCS D+T+ +W L T V R GH + + D+
Sbjct: 445 SLMGHTGPVYRCAFAPEM-NLLLSCSEDSTIRLWSLL---TWSCVVTYR--GHVYPVWDV 498
Query: 71 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 130
+ G Y +S S+DKT RLW + + R F H DV V F ++ + + S D+T+
Sbjct: 499 RFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTV 558
Query: 131 KLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS 190
+LW+ + ++ GH VS + FS + + S D + +W+L+N L
Sbjct: 559 RLWDNMTGQSVRLMT-GHKGSVSSLAFSACGR--YLASGSVDHNIIIWDLSNGSLVTTLL 615
Query: 191 GHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLN 223
HT + T+T S DG++ A+ G D N LWD +
Sbjct: 616 RHTSTVTTITFSRDGTVLAAAGLDNNLTLWDFH 648
Score = 249 (92.7 bits), Expect = 4.2e-19, Sum P(2) = 4.2e-19
Identities = 62/196 (31%), Positives = 96/196 (48%)
Query: 50 DTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 109
D G + L GH+ + + + N LS S D T+RLW L + H V
Sbjct: 436 DDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHVYPV 495
Query: 110 LSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSA 169
V F+ VS S DKT +LW T ++ + GH V CV+F PN + +
Sbjct: 496 WDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFV-GHLSDVDCVQFHPNSN--YVATG 552
Query: 170 GWDRMVKVW-NLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHL 228
DR V++W N+T +++ +GH G ++++ S G ASG D N ++WDL++G +
Sbjct: 553 SSDRTVRLWDNMTGQSVRLM-TGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLV 611
Query: 229 HTLV-HNDIITALCFS 243
TL+ H +T + FS
Sbjct: 612 TTLLRHTSTVTTITFS 627
Score = 215 (80.7 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 63/232 (27%), Positives = 108/232 (46%)
Query: 83 SWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA-HCKF 141
S D +R+ D +G+ TR HT V AF+ + ++S S D TI+LW+ L C
Sbjct: 427 SADINVRMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVV 486
Query: 142 TIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL-TNCKLKINHSGHTGYLNTVT 200
T GH V VRF+P+ VS +D+ ++W +N L++ GH ++ V
Sbjct: 487 TY--RGHVYPVWDVRFAPHGY--YFVSCSYDKTARLWATDSNQALRV-FVGHLSDVDCVQ 541
Query: 201 VSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSP-NRSFQKIKLDISRT 258
P+ + A+G D LWD G+ + + H +++L FS R +D
Sbjct: 542 FHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVD---- 597
Query: 259 LQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWN 310
N+I++ +++G + T V ++ FS D + ++ D + LW+
Sbjct: 598 ---HNIIIWDLSNGSLVTTLLRHTSTVTTITFSRDGTVLAAAGLDNNLTLWD 646
Score = 113 (44.8 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 47/204 (23%), Positives = 83/204 (40%)
Query: 46 LTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 105
L++D V L H ++ +S D G D ++R+W L K R +D
Sbjct: 360 LSKDQLPSAVFYTVLNSHQG-VTCAEISDDSTMLACGFGDSSVRIWSLTPAKL-RTLKD- 416
Query: 106 TKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPI 165
D L R++ S D +++ + + + T GH+ V F+P N +
Sbjct: 417 -ADSL--------RELDKESADINVRMLDDRSG-EVTRSLMGHTGPVYRCAFAPE-MN-L 464
Query: 166 IVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDG 225
++S D +++W+L + + GH + V +P G S D A LW +
Sbjct: 465 LLSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSN 524
Query: 226 KHLHTLV-HNDIITALCFSPNRSF 248
+ L V H + + F PN ++
Sbjct: 525 QALRVFVGHLSDVDCVQFHPNSNY 548
Score = 51 (23.0 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 349 SLAWSTDGQTLFAGYSDNTIRVWQVS 374
SLA+S G+ L +G D+ I +W +S
Sbjct: 581 SLAFSACGRYLASGSVDHNIIIWDLS 606
Score = 44 (20.5 bits), Expect = 4.2e-19, Sum P(2) = 4.2e-19
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 349 SLAWSTDGQTLFAGYSDNTIRVW 371
++ +S DG L A DN + +W
Sbjct: 623 TITFSRDGTVLAAAGLDNNLTLW 645
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 247 (92.0 bits), Expect = 8.0e-22, Sum P(2) = 8.0e-22
Identities = 62/187 (33%), Positives = 89/187 (47%)
Query: 58 KRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 117
K L GHS + S D NY LS S D T+RLW L ++ H V FS
Sbjct: 297 KILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPY 356
Query: 118 NRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKV 177
VS D+ +LW T H + + GH V+C RF PN + + DR V++
Sbjct: 357 GYYFVSGGHDRVARLWAT-DHYQPLRIFAGHLADVNCTRFHPNSN--YVATGSADRTVRL 413
Query: 178 WNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDI 236
W++ N +GH G ++++T SP+G A+G D +LWD+ G + L H D
Sbjct: 414 WDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDT 473
Query: 237 ITALCFS 243
+ +L FS
Sbjct: 474 VCSLRFS 480
Score = 231 (86.4 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 64/222 (28%), Positives = 102/222 (45%)
Query: 1 MSTETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRL 60
M +T L GH+G V + +P + +LS S D T+ +W L G
Sbjct: 288 MDEKTASELKILYGHSGPVYGASFSPD-RNYLLSSSEDGTVRLWSLQTFTCLVGY----- 341
Query: 61 KGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ 120
KGH++ + D S G Y +SG D+ RLW + R F H DV F ++
Sbjct: 342 KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNY 401
Query: 121 IVSSSRDKTIKLWNTL-AHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
+ + S D+T++LW+ L +C + GH + + FSPN + + + D V +W+
Sbjct: 402 VATGSADRTVRLWDVLNGNC--VRIFTGHKGPIHSLTFSPNGR--FLATGATDGRVLLWD 457
Query: 180 LTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWD 221
+ + + GHT + ++ S DG + ASG D LWD
Sbjct: 458 IGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 499
Score = 231 (86.4 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 72/254 (28%), Positives = 113/254 (44%)
Query: 89 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGH 148
R+ D + H+ V +FS D ++SSS D T++LW+ L + GH
Sbjct: 286 RIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWS-LQTFTCLVGYKGH 344
Query: 149 SDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCK-LKINHSGHTGYLNTVTVSPDGSL 207
+ V +FSP VS G DR+ ++W + + L+I +GH +N P+ +
Sbjct: 345 NYPVWDTQFSP--YGYYFVSGGHDRVARLWATDHYQPLRI-FAGHLADVNCTRFHPNSNY 401
Query: 208 CASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLIL 266
A+G D LWD+ +G + H I +L FSPN F ++ ++L
Sbjct: 402 VATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRF------LATGATDGRVLL 455
Query: 267 YPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKK 326
+ I HG M V S+ FS D + S S D T++LW+ + DLET
Sbjct: 456 WDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVK----AFEDLETDN 511
Query: 327 MVEELRPDVVSQST 340
E L +++ST
Sbjct: 512 SQELLLGTYMTKST 525
Score = 130 (50.8 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 34/123 (27%), Positives = 55/123 (44%)
Query: 14 GHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLS 73
GH V +P + + + S D T+ +W D G + GH I + S
Sbjct: 385 GHLADVNCTRFHPN-SNYVATGSADRTVRLW-----DVLNGNCVRIFTGHKGPIHSLTFS 438
Query: 74 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLW 133
+G + +G+ D + LWD+ G + HT V S+ FS D + S S D T++LW
Sbjct: 439 PNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLW 498
Query: 134 NTL 136
+ +
Sbjct: 499 DAV 501
Score = 113 (44.8 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 44/190 (23%), Positives = 76/190 (40%)
Query: 60 LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 119
L + ++ + ++ D + G D T+R+W + K + SV + D
Sbjct: 226 LNAYQQGLTAVDVTDDSSLIAGGFADSTVRVWSVTP-----------KKLRSVKQAADLS 274
Query: 120 QIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
I S D ++ + + I+ GHS V FSP+ ++S+ D V++W+
Sbjct: 275 LIDKESDDVLERIMDEKTASELKILY-GHSGPVYGASFSPDRN--YLLSSSEDGTVRLWS 331
Query: 180 LTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIIT 238
L + + GH + SP G SGG D A LW + + L H +
Sbjct: 332 LQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVN 391
Query: 239 ALCFSPNRSF 248
F PN ++
Sbjct: 392 CTRFHPNSNY 401
Score = 68 (29.0 bits), Expect = 8.0e-22, Sum P(2) = 8.0e-22
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 346 MCLSLAWSTDGQTLFAGYSDNTIRVW 371
+C SL +S DG+ L +G DNT+R+W
Sbjct: 474 VC-SLRFSRDGEILASGSMDNTVRLW 498
Score = 46 (21.3 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 349 SLAWSTDGQTLFAGYSDNTIRVWQV 373
SL +S +G+ L G +D + +W +
Sbjct: 434 SLTFSPNGRFLATGATDGRVLLWDI 458
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 271 (100.5 bits), Expect = 1.2e-21, P = 1.2e-21
Identities = 70/214 (32%), Positives = 110/214 (51%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
TL GH+G V + A +LSCS D+T+ W L + TN + +GH++ + D+
Sbjct: 349 TLRGHSGPVYRTAFLTD-ASGLLSCSEDSTVRYWDL-KSFTNTVL----YRGHAYPVWDV 402
Query: 71 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 130
+S Y + S D+T RLW A R + H DV V F ++ I + S DKT+
Sbjct: 403 DVSPCSLYFSTASHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYIATGSTDKTV 462
Query: 131 KLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS 190
+LW+T + GH V + FSPN + + SAG D+ +K+W+L + L +
Sbjct: 463 RLWSTRQGASVRLFT-GHRGPVLTLAFSPNGK--YLASAGEDQRLKLWDLASGGLFKDLR 519
Query: 191 GHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLND 224
GHT +++++ S D SL AS D +WD+ +
Sbjct: 520 GHTDTISSLSFSQDSSLVASASMDNTVRVWDIRN 553
Score = 235 (87.8 bits), Expect = 2.4e-19, Sum P(3) = 2.4e-19
Identities = 63/201 (31%), Positives = 95/201 (47%)
Query: 49 DDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKD 108
D+ G K L+GHS + +D + LS S D T+R WDL + T + H
Sbjct: 339 DEDASGSEIKTLRGHSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKSFTNTVLYRGHAYP 398
Query: 109 VLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVS 168
V V S + ++S D+T +LW+ + GH V CV+F PN I +
Sbjct: 399 VWDVDVSPCSLYFSTASHDRTARLWSFARTYPLRLYA-GHLSDVDCVKFHPNSN--YIAT 455
Query: 169 AGWDRMVKVWNLTN-CKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKH 227
D+ V++W+ +++ +GH G + T+ SP+G AS G+D LWDL G
Sbjct: 456 GSTDKTVRLWSTRQGASVRL-FTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGL 514
Query: 228 LHTLV-HNDIITALCFSPNRS 247
L H D I++L FS + S
Sbjct: 515 FKDLRGHTDTISSLSFSQDSS 535
Score = 212 (79.7 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 53/180 (29%), Positives = 88/180 (48%)
Query: 3 TETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKG 62
T T+ RG + + W ++ + T S D T +W R Y P + G
Sbjct: 387 TNTVLYRG--HAYPVWDVDVSPCSLYFST---ASHDRTARLWSFAR---TY--PLRLYAG 436
Query: 63 HSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 122
H + + + NY +GS DKT+RLW G + R F H VL++AFS + + +
Sbjct: 437 HLSDVDCVKFHPNSNYIATGSTDKTVRLWSTRQGASVRLFTGHRGPVLTLAFSPNGKYLA 496
Query: 123 SSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTN 182
S+ D+ +KLW+ + F + GH+D +S + FS + + ++ SA D V+VW++ N
Sbjct: 497 SAGEDQRLKLWDLASGGLFKDLR-GHTDTISSLSFSQD--SSLVASASMDNTVRVWDIRN 553
Score = 183 (69.5 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 52/219 (23%), Positives = 97/219 (44%)
Query: 94 AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVS 153
A+G + H+ V AF D ++S S D T++ W+ + T++ GH+ V
Sbjct: 342 ASGSEIKTLRGHSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKSFTN-TVLYRGHAYPVW 400
Query: 154 CVRFSPNHQNPIIVSAGWDRMVKVWNLTNC-KLKINHSGHTGYLNTVTVSPDGSLCASGG 212
V SP + +A DR ++W+ L++ ++GH ++ V P+ + A+G
Sbjct: 401 DVDVSPC--SLYFSTASHDRTARLWSFARTYPLRL-YAGHLSDVDCVKFHPNSNYIATGS 457
Query: 213 KDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINH 271
D LW G + H + L FSPN + ++ + L L+ +
Sbjct: 458 TDKTVRLWSTRQGASVRLFTGHRGPVLTLAFSPNGKY------LASAGEDQRLKLWDLAS 511
Query: 272 GKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWN 310
G + + S++FS D+ + S+S D T+++W+
Sbjct: 512 GGLFKDLRGHTDTISSLSFSQDSSLVASASMDNTVRVWD 550
Score = 58 (25.5 bits), Expect = 2.4e-19, Sum P(3) = 2.4e-19
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 349 SLAWSTDGQTLFAGYSDNTIRVWQV 373
SL++S D + + DNT+RVW +
Sbjct: 527 SLSFSQDSSLVASASMDNTVRVWDI 551
Score = 37 (18.1 bits), Expect = 2.4e-19, Sum P(3) = 2.4e-19
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 36 SRDNTLIIWKLT 47
S DN+ I W LT
Sbjct: 180 SEDNSAICWVLT 191
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 247 (92.0 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 85/329 (25%), Positives = 144/329 (43%)
Query: 1 MSTETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRL 60
+STET Q T GH WV IA +P C +++ + +W D + L
Sbjct: 156 LSTETPQF--TAKGHRHWVLSIAWSPDGKKLASGC-KNSQIFLW----DPATGNQIGRVL 208
Query: 61 KGHSHFISDIV-----LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 115
GHS +I+ + ++ + Y S S D ++R+WD G+ + HT+ V V +
Sbjct: 209 TGHSKWITCLCWEPLHINPECRYLASASKDGSIRIWDTLMGRCDKILTGHTQSVTCVKWG 268
Query: 116 VDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMV 175
D + SSS+D+TIK+W + ++ GH+ WV+ + S ++ + +
Sbjct: 269 GDGL-LYSSSQDRTIKVWRSQDGILCRTLQ-GHAHWVNTMALSTDYVLRTGAFEPAEATI 326
Query: 176 KVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLW-DLNDGKHLHTLV-H 233
+++ ++ Y P+ + SG D LW D K L + H
Sbjct: 327 NPQDMSGSLAELKDKAQQRYDKVRGQGPERLV--SGSDDFTLFLWRPAEDKKPLERMTGH 384
Query: 234 NDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVD 293
+I + FSP+ ++ S + KS + L+ GK T V +A+S D
Sbjct: 385 QALINQVLFSPDT-----RIIASASFDKS-IKLWEGRTGKYLTSLRGHVSAVYQIAWSAD 438
Query: 294 NRQIVSSSRDKTIKLWNTLAHCKFTIVDL 322
+R +VS S D T+K+W+ A K +DL
Sbjct: 439 SRLLVSGSSDSTLKVWD--AETKKLAIDL 465
Score = 231 (86.4 bits), Expect = 3.9e-20, Sum P(2) = 3.9e-20
Identities = 57/177 (32%), Positives = 88/177 (49%)
Query: 60 LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 119
L+GH+ + + S G Y SGS D T+R WDL+ + H VLS+A+S D +
Sbjct: 123 LEGHTEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPQFTAKGHRHWVLSIAWSPDGK 182
Query: 120 QIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNP---IIVSAGWDRMVK 176
++ S ++ I LW+ + V GHS W++C+ + P H NP + SA D ++
Sbjct: 183 KLASGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPLHINPECRYLASASKDGSIR 242
Query: 177 VWN--LTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTL 231
+W+ + C KI +GHT + V DG L +S +D +W DG TL
Sbjct: 243 IWDTLMGRCD-KIL-TGHTQSVTCVKWGGDGLLYSSS-QDRTIKVWRSQDGILCRTL 296
Score = 227 (85.0 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 49/150 (32%), Positives = 79/150 (52%)
Query: 29 PDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTL 88
P+ ++S S D TL +W+ D P +R+ GH I+ ++ S D S S+DK++
Sbjct: 354 PERLVSGSDDFTLFLWRPAEDKK----PLERMTGHQALINQVLFSPDTRIIASASFDKSI 409
Query: 89 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGH 148
+LW+ GK H V +A+S D+R +VS S D T+K+W+ K I GH
Sbjct: 410 KLWEGRTGKYLTSLRGHVSAVYQIAWSADSRLLVSGSSDSTLKVWDAETK-KLAIDLPGH 468
Query: 149 SDWVSCVRFSPNHQNPIIVSAGWDRMVKVW 178
+D V +SP+ Q + S G D+ +++W
Sbjct: 469 ADEVFATDWSPDGQR--VASGGKDKCLRIW 496
Score = 209 (78.6 bits), Expect = 9.0e-17, Sum P(2) = 9.0e-17
Identities = 59/201 (29%), Positives = 98/201 (48%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
+L GH V +A +P + S S D T+ W L+ + PQ KGH H++ I
Sbjct: 122 SLEGHTEAVISVAFSPT-GKYLASGSGDTTVRFWDLSTE-----TPQFTAKGHRHWVLSI 175
Query: 71 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRR-FEDHTKDVLSVAF-----SVDNRQIVSS 124
S DG SG + + LWD A G R H+K + + + + + R + S+
Sbjct: 176 AWSPDGKKLASGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPLHINPECRYLASA 235
Query: 125 SRDKTIKLWNTL-AHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNC 183
S+D +I++W+TL C + GH+ V+CV++ + ++ S+ DR +KVW +
Sbjct: 236 SKDGSIRIWDTLMGRCDKILT--GHTQSVTCVKWGGDG---LLYSSSQDRTIKVWRSQDG 290
Query: 184 KLKINHSGHTGYLNTVTVSPD 204
L GH ++NT+ +S D
Sbjct: 291 ILCRTLQGHAHWVNTMALSTD 311
Score = 190 (71.9 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 68/241 (28%), Positives = 113/241 (46%)
Query: 12 LNGHNGWVTQIATNPKFP-DTIL-SCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISD 69
L GH TQ T K+ D +L S S+D T+ +W+ ++D G+ + L+GH+H+++
Sbjct: 255 LTGH----TQSVTCVKWGGDGLLYSSSQDRTIKVWR-SQD----GILCRTLQGHAHWVNT 305
Query: 70 IVLSSDGNYAL-SGSWDK---TLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSS 125
+ LS+D Y L +G+++ T+ D++ + +D + ++VS S
Sbjct: 306 MALSTD--YVLRTGAFEPAEATINPQDMSG--SLAELKDKAQQRYDKVRGQGPERLVSGS 361
Query: 126 RDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKL 185
D T+ LW K GH ++ V FSP+ + II SA +D+ +K+W K
Sbjct: 362 DDFTLFLWRPAEDKKPLERMTGHQALINQVLFSPDTR--IIASASFDKSIKLWEGRTGKY 419
Query: 186 KINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSP 244
+ GH + + S D L SG D +WD K L H D + A +SP
Sbjct: 420 LTSLRGHVSAVYQIAWSADSRLLVSGSSDSTLKVWDAETKKLAIDLPGHADEVFATDWSP 479
Query: 245 N 245
+
Sbjct: 480 D 480
Score = 136 (52.9 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 40/155 (25%), Positives = 73/155 (47%)
Query: 94 AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHC-KFTIVEDGHSDWV 152
A + T E HT+ V+SVAFS + + S S D T++ W+ +FT GH WV
Sbjct: 115 AVTRCTSSLEGHTEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPQFTA--KGHRHWV 172
Query: 153 SCVRFSPNHQNPIIVSAGWDRMVKVWN-LTNCKLKINHSGHTGYLNTVT-----VSPDGS 206
+ +SP+ + + S + + +W+ T ++ +GH+ ++ + ++P+
Sbjct: 173 LSIAWSPDGKK--LASGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPLHINPECR 230
Query: 207 LCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITAL 240
AS KD + +WD G+ L H +T +
Sbjct: 231 YLASASKDGSIRIWDTLMGRCDKILTGHTQSVTCV 265
Score = 70 (29.7 bits), Expect = 3.9e-20, Sum P(2) = 3.9e-20
Identities = 11/22 (50%), Positives = 17/22 (77%)
Query: 350 LAWSTDGQTLFAGYSDNTIRVW 371
+AWS D + L +G SD+T++VW
Sbjct: 433 IAWSADSRLLVSGSSDSTLKVW 454
Score = 64 (27.6 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 17/52 (32%), Positives = 25/52 (48%)
Query: 321 DLETKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQ 372
D ETKK+ +L P + D WS DGQ + +G D +R+W+
Sbjct: 455 DAETKKLAIDL-PGHADEVFATD--------WSPDGQRVASGGKDKCLRIWR 497
Score = 50 (22.7 bits), Expect = 7.5e-07, Sum P(2) = 7.5e-07
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 352 WSTDGQTLFAGYSDNTIRVWQ 372
W DG L++ D TI+VW+
Sbjct: 267 WGGDG-LLYSSSQDRTIKVWR 286
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 247 (92.0 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 92/333 (27%), Positives = 147/333 (44%)
Query: 1 MSTETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRL 60
+STET T GH WV I+ +P C ++ +++W + T G + L
Sbjct: 145 LSTETPHF--TCKGHRHWVLSISWSPDGKKLASGC-KNGQILLWDPSTG-TQVG---RTL 197
Query: 61 KGHSHFISDIV-----LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 115
GHS +I+ + ++ + Y S S D ++R+WD AG+ R HT+ V + +
Sbjct: 198 TGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWG 257
Query: 116 VDNRQIVSSSRDKTIKLWNTLAH----CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGW 171
D + S+S+D+TIK+W AH C+ T+ GH WV+ + S ++
Sbjct: 258 GDGL-LYSASQDRTIKVWR--AHDGVLCR-TL--QGHGHWVNTMALSTDYALRTGAFEPA 311
Query: 172 DRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWD-LNDGKHLHT 230
+ V +L ++ + Y N V L SG D LW D K L
Sbjct: 312 EATVNAQDLQGSLKELKERASSRY-NLVRGQGPERL-VSGSDDFTLFLWSPAEDKKPLAR 369
Query: 231 LV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVA 289
+ H +I + FSP+ ++ S + KS + L+ GK V +A
Sbjct: 370 MTGHQALINQVLFSPDS-----RIVASASFDKS-IKLWDGRTGKYLASLRGHVAAVYQIA 423
Query: 290 FSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDL 322
+S D+R +VS S D T+K+W+ A K T DL
Sbjct: 424 WSADSRLLVSGSSDSTLKVWDVKAQ-KLT-TDL 454
Score = 239 (89.2 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 52/150 (34%), Positives = 79/150 (52%)
Query: 29 PDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTL 88
P+ ++S S D TL +W D P R+ GH I+ ++ S D S S+DK++
Sbjct: 343 PERLVSGSDDFTLFLWSPAEDKK----PLARMTGHQALINQVLFSPDSRIVASASFDKSI 398
Query: 89 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGH 148
+LWD GK H V +A+S D+R +VS S D T+K+W+ A K T GH
Sbjct: 399 KLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQ-KLTTDLPGH 457
Query: 149 SDWVSCVRFSPNHQNPIIVSAGWDRMVKVW 178
+D V V +SP+ Q + S G D+ +++W
Sbjct: 458 ADEVYAVDWSPDGQR--VASGGKDKCLRIW 485
Score = 227 (85.0 bits), Expect = 4.4e-20, Sum P(2) = 4.4e-20
Identities = 55/188 (29%), Positives = 89/188 (47%)
Query: 60 LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 119
L+GHS + + S G Y SGS D T+R WDL+ + H VLS+++S D +
Sbjct: 112 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGK 171
Query: 120 QIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNP---IIVSAGWDRMVK 176
++ S ++ I LW+ + GHS W++ + + P H NP + S+ D V+
Sbjct: 172 KLASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVR 231
Query: 177 VWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HND 235
VW+ T + + +GHT + + DG L S +D +W +DG TL H
Sbjct: 232 VWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGHGH 290
Query: 236 IITALCFS 243
+ + S
Sbjct: 291 WVNTMALS 298
Score = 210 (79.0 bits), Expect = 7.9e-17, Sum P(2) = 7.9e-17
Identities = 59/204 (28%), Positives = 103/204 (50%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
+L GH+ V +A +P + S S D T+ W L+ + P KGH H++ I
Sbjct: 111 SLEGHSEAVISVAFSPT-GKYLASGSGDTTVRFWDLSTE-----TPHFTCKGHRHWVLSI 164
Query: 71 VLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAF-----SVDNRQIVSS 124
S DG SG + + LWD + G + R H+K + +++ + + R + SS
Sbjct: 165 SWSPDGKKLASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEPLHMNPECRYVASS 224
Query: 125 SRDKTIKLWNTLA-HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNC 183
S+D ++++W+T A C+ + GH+ V+C+R+ + ++ SA DR +KVW +
Sbjct: 225 SKDGSVRVWDTTAGRCERILT--GHTQSVTCLRWGGDG---LLYSASQDRTIKVWRAHDG 279
Query: 184 KLKINHSGHTGYLNTVTVSPDGSL 207
L GH ++NT+ +S D +L
Sbjct: 280 VLCRTLQGHGHWVNTMALSTDYAL 303
Score = 202 (76.2 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 67/240 (27%), Positives = 114/240 (47%)
Query: 12 LNGHNGWVTQIATNPKFPDTIL-SCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
L GH VT + D +L S S+D T+ +W+ D GV + L+GH H+++ +
Sbjct: 244 LTGHTQSVTCLRWGG---DGLLYSASQDRTIKVWR-AHD----GVLCRTLQGHGHWVNTM 295
Query: 71 VLSSDGNYAL-SGSWDK---TLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSR 126
LS+D YAL +G+++ T+ DL + + ++ ++ ++VS S
Sbjct: 296 ALSTD--YALRTGAFEPAEATVNAQDLQG--SLKELKERASSRYNLVRGQGPERLVSGSD 351
Query: 127 DKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLK 186
D T+ LW+ K GH ++ V FSP+ + I+ SA +D+ +K+W+ K
Sbjct: 352 DFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSR--IVASASFDKSIKLWDGRTGKYL 409
Query: 187 INHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPN 245
+ GH + + S D L SG D +WD+ K L H D + A+ +SP+
Sbjct: 410 ASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLTTDLPGHADEVYAVDWSPD 469
Score = 141 (54.7 bits), Expect = 8.8e-09, Sum P(2) = 8.8e-09
Identities = 40/155 (25%), Positives = 73/155 (47%)
Query: 94 AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCK-FTIVEDGHSDWV 152
A + T E H++ V+SVAFS + + S S D T++ W+ FT GH WV
Sbjct: 104 AVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTC--KGHRHWV 161
Query: 153 SCVRFSPNHQNPIIVSAGWDRMVKVWN-LTNCKLKINHSGHTGYLNTVT-----VSPDGS 206
+ +SP+ + + S + + +W+ T ++ +GH+ ++ ++ ++P+
Sbjct: 162 LSISWSPDGKK--LASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEPLHMNPECR 219
Query: 207 LCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITAL 240
AS KD + +WD G+ L H +T L
Sbjct: 220 YVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCL 254
Score = 74 (31.1 bits), Expect = 4.4e-20, Sum P(2) = 4.4e-20
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 350 LAWSTDGQTLFAGYSDNTIRVWQV 373
+AWS D + L +G SD+T++VW V
Sbjct: 422 IAWSADSRLLVSGSSDSTLKVWDV 445
Score = 63 (27.2 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 334 DVVSQSTKADPP----MCLSLAWSTDGQTLFAGYSDNTIRVWQ 372
DV +Q D P ++ WS DGQ + +G D +R+W+
Sbjct: 444 DVKAQKLTTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIWR 486
Score = 53 (23.7 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 350 LAWSTDGQTLFAGYSDNTIRVWQ 372
L W DG L++ D TI+VW+
Sbjct: 254 LRWGGDG-LLYSASQDRTIKVWR 275
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 243 (90.6 bits), Expect = 2.3e-21, Sum P(2) = 2.3e-21
Identities = 63/214 (29%), Positives = 107/214 (50%)
Query: 12 LNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV 71
L GH G + +P+ + +LS D + IW++ D N + GHS + +
Sbjct: 51 LEGHEGEIFTAEFHPE-GELLLSSGFDRQIYIWQVYEDCENV----MAMSGHSGAVMEAH 105
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SSSRDKTI 130
+ DG++ + S DKTL WD+A G+ RRF+ H V SV S +Q++ S S D+TI
Sbjct: 106 FTPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTI 165
Query: 131 KLWNTLA-HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINH 189
K+W+ H T+ E V+ V F + ++S G D VK+W++ + ++H
Sbjct: 166 KIWDARKKHAAHTL-ESPFQ--VTAVCFGDTGEQ--VISGGIDNEVKIWDIRK-QAVLHH 219
Query: 190 -SGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
GH+ + +++SP+G + D +WD+
Sbjct: 220 LRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDV 253
Score = 242 (90.2 bits), Expect = 4.6e-19, P = 4.6e-19
Identities = 70/244 (28%), Positives = 111/244 (45%)
Query: 12 LNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV 71
++GH+G V + P I +CS D TL W D G Q+R KGH +F++ +
Sbjct: 94 MSGHSGAVMEAHFTPD-GSHIFTCSTDKTLAFW-----DIATGQRQRRFKGHGNFVNSVQ 147
Query: 72 LSSDGNYAL-SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 130
S G L SGS D+T+++WD E + V +V F Q++S D +
Sbjct: 148 GSRRGQQLLCSGSDDRTIKIWDARKKHAAHTLESPFQ-VTAVCFGDTGEQVISGGIDNEV 206
Query: 131 KLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT------NC- 183
K+W+ + GHSD ++ + SP + I++ D ++VW++ C
Sbjct: 207 KIWDIRKQAVLHHLR-GHSDTITGMSLSP--EGDFILTNAMDNTLRVWDVRPYAPGERCV 263
Query: 184 KLKINHSGHTGYLNTVTV--SPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITAL 240
K+ H H N + SP SG D + +WD+N + L+ L HN + A+
Sbjct: 264 KVFQGHQ-HNFEKNLLRCAWSPGSDKITSGSADRHVYIWDVNTRRILYKLPGHNGSVNAV 322
Query: 241 CFSP 244
FSP
Sbjct: 323 DFSP 326
Score = 169 (64.5 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 48/215 (22%), Positives = 94/215 (43%)
Query: 101 RFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPN 160
+ E H ++ + F + ++SS D+ I +W C+ + GHS V F+P+
Sbjct: 50 QLEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAHFTPD 109
Query: 161 HQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGS-LCASGGKDMNAML 219
+ I + D+ + W++ + + GH ++N+V S G L SG D +
Sbjct: 110 GSH--IFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKI 167
Query: 220 WDLNDGKHLHTLVHNDIITALCFSPNRSFQKIKLDISRTLQ----KSNLILYPINHGKME 275
WD HTL +TA+CF Q I I ++ + +L+ + G +
Sbjct: 168 WDARKKHAAHTLESPFQVTAVCFGDTGE-QVISGGIDNEVKIWDIRKQAVLHHLR-GHSD 225
Query: 276 TPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWN 310
T + ++ S + I++++ D T+++W+
Sbjct: 226 T--------ITGMSLSPEGDFILTNAMDNTLRVWD 252
Score = 168 (64.2 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 49/229 (21%), Positives = 95/229 (41%)
Query: 5 TLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHS 64
T Q + GH +V + + + + S S D T+ IW + + + S
Sbjct: 129 TGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTL-------ES 181
Query: 65 HF-ISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 123
F ++ + G +SG D +++WD+ H+ + ++ S + I++
Sbjct: 182 PFQVTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILT 241
Query: 124 SSRDKTIKLWNTLAHC---KFTIVEDGHS-----DWVSCVRFSPNHQNPIIVSAGWDRMV 175
++ D T+++W+ + + V GH + + C +SP I S DR V
Sbjct: 242 NAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCA-WSPGSDK--ITSGSADRHV 298
Query: 176 KVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLND 224
+W++ ++ GH G +N V SP L SG D L ++++
Sbjct: 299 YIWDVNTRRILYKLPGHNGSVNAVDFSPKEPLILSGSSDKTLYLGEIDE 347
Score = 48 (22.0 bits), Expect = 2.3e-21, Sum P(2) = 2.3e-21
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 348 LSLAWSTDGQTLFAGYSDNTIRVWQVS 374
L AWS + +G +D + +W V+
Sbjct: 278 LRCAWSPGSDKITSGSADRHVYIWDVN 304
>UNIPROTKB|E1BHK9 [details] [associations]
symbol:E1BHK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 EMBL:DAAA02074871 IPI:IPI00726849
ProteinModelPortal:E1BHK9 Ensembl:ENSBTAT00000028149 OMA:RTATERK
Uniprot:E1BHK9
Length = 586
Score = 269 (99.8 bits), Expect = 2.3e-21, P = 2.3e-21
Identities = 73/222 (32%), Positives = 108/222 (48%)
Query: 9 RGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFIS 68
R L GH G V P +LSCS D ++ W L TN + Q GH++ +
Sbjct: 332 RKVLLGHCGPVYSTRFLPD-SSALLSCSEDTSIRYWDL-ESFTNTVLYQ----GHAYPVW 385
Query: 69 DIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDK 128
D+ +S + S S+D T RLW R + H V V F ++ + + S DK
Sbjct: 386 DLDISPHSLFFASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSNYLATGSTDK 445
Query: 129 TIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKIN 188
T++LW+ + GH V C+ FSPN Q +VSAG D+++K+W+L + L +
Sbjct: 446 TVRLWSAQQGNSVRLFT-GHCGPVRCLAFSPNGQ--YLVSAGEDQLLKLWDLASGTLYKD 502
Query: 189 HSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHT 230
GHT + +VT S D S+ AS D + +WD+ KH T
Sbjct: 503 LHGHTDDITSVTFSLDSSVIASASMDNSVRIWDIKS-KHNST 543
Score = 203 (76.5 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 56/180 (31%), Positives = 91/180 (50%)
Query: 3 TETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKG 62
T T+ +G + + W I+ + F S S D+T +W D Y P + G
Sbjct: 372 TNTVLYQG--HAYPVWDLDISPHSLF---FASASYDHTARLWSF---DRTY--PLRIYAG 421
Query: 63 HSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 122
H + + + NY +GS DKT+RLW G + R F H V +AFS + + +V
Sbjct: 422 HLAGVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHCGPVRCLAFSPNGQYLV 481
Query: 123 SSSRDKTIKLWNTLAHCKFTIVED--GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL 180
S+ D+ +KLW+ LA T+ +D GH+D ++ V FS + + +I SA D V++W++
Sbjct: 482 SAGEDQLLKLWD-LA--SGTLYKDLHGHTDDITSVTFSLD--SSVIASASMDNSVRIWDI 536
Score = 188 (71.2 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 56/226 (24%), Positives = 102/226 (45%)
Query: 105 HTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNP 164
H V S F D+ ++S S D +I+ W+ L T++ GH+ V + SP+ +
Sbjct: 338 HCGPVYSTRFLPDSSALLSCSEDTSIRYWD-LESFTNTVLYQGHAYPVWDLDISPH--SL 394
Query: 165 IIVSAGWDRMVKVWNLTNC-KLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLN 223
SA +D ++W+ L+I ++GH ++ V P+ + A+G D LW
Sbjct: 395 FFASASYDHTARLWSFDRTYPLRI-YAGHLAGVDCVKFHPNSNYLATGSTDKTVRLWSAQ 453
Query: 224 DGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLF 282
G + H + L FSPN + +S + L L+ + G +
Sbjct: 454 QGNSVRLFTGHCGPVRCLAFSPNGQYL-----VSAG-EDQLLKLWDLASGTLYKDLHGHT 507
Query: 283 RDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMV 328
D+ SV FS+D+ I S+S D ++++W+ + T D + +++
Sbjct: 508 DDITSVTFSLDSSVIASASMDNSVRIWDIKSKHNSTPADGSSSELL 553
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 234 (87.4 bits), Expect = 2.7e-21, Sum P(2) = 2.7e-21
Identities = 88/325 (27%), Positives = 143/325 (44%)
Query: 1 MSTETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKR- 59
+STET T GH WV I+ +P T+ S ++ +++W D + G R
Sbjct: 94 LSTETPHF--TCQGHRHWVLSISWSPD-GKTLASGCKNGQILLW-----DPSTGKQVGRV 145
Query: 60 LKGHSHFISDIV-----LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 114
L GHS +I+ + + + Y S S D ++R+WD AG+ R HT+ V + +
Sbjct: 146 LAGHSKWITGLSWEPLHANPECRYMASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRW 205
Query: 115 SVDNRQIVSSSRDKTIKLWNTLAH----CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAG 170
D + S+S+D+TIK+W AH C+ T+ GH WV+ + S ++
Sbjct: 206 GGDGL-LYSASQDRTIKVWR--AHDGVLCR-TL--QGHGHWVNTMALSTDYALRTGAFEP 259
Query: 171 WDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWD-LNDGKHLH 229
+ + +L ++ Y N V L SG D +W D K L
Sbjct: 260 AEASINAQDLQGSLQELKDRALRRY-NLVRGQGPERL-VSGSDDFTLFMWSPAEDKKPLA 317
Query: 230 TLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSV 288
+ H +I + FSP+ ++ S + KS + L+ GK V +
Sbjct: 318 RMTGHQALINQVLFSPDS-----RIIASASFDKS-IKLWDGRTGKYLASLRGHVAAVYQI 371
Query: 289 AFSVDNRQIVSSSRDKTIKLWNTLA 313
A+S D+R +VS S D T+K+W+ A
Sbjct: 372 AWSADSRLLVSGSSDSTLKVWDVKA 396
Score = 232 (86.7 bits), Expect = 4.5e-17, P = 4.5e-17
Identities = 51/150 (34%), Positives = 78/150 (52%)
Query: 29 PDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTL 88
P+ ++S S D TL +W D P R+ GH I+ ++ S D S S+DK++
Sbjct: 292 PERLVSGSDDFTLFMWSPAEDKK----PLARMTGHQALINQVLFSPDSRIIASASFDKSI 347
Query: 89 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGH 148
+LWD GK H V +A+S D+R +VS S D T+K+W+ A K GH
Sbjct: 348 KLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQ-KLAADLPGH 406
Query: 149 SDWVSCVRFSPNHQNPIIVSAGWDRMVKVW 178
+D V V +SP+ Q + S G D+ +++W
Sbjct: 407 ADEVYAVDWSPDGQR--VASGGKDKCLRIW 434
Score = 224 (83.9 bits), Expect = 5.5e-20, Sum P(2) = 5.5e-20
Identities = 56/188 (29%), Positives = 89/188 (47%)
Query: 60 LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 119
L+GHS + + S G Y SGS D T+R WDL+ + H VLS+++S D +
Sbjct: 61 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGK 120
Query: 120 QIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNP---IIVSAGWDRMVK 176
+ S ++ I LW+ + V GHS W++ + + P H NP + S+ D V+
Sbjct: 121 TLASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMASSSKDGSVR 180
Query: 177 VWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HND 235
VW+ T + + +GHT + + DG L S +D +W +DG TL H
Sbjct: 181 VWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGHGH 239
Query: 236 IITALCFS 243
+ + S
Sbjct: 240 WVNTMALS 247
Score = 208 (78.3 bits), Expect = 5.7e-18, Sum P(2) = 5.7e-18
Identities = 59/204 (28%), Positives = 103/204 (50%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
+L GH+ V +A +P + S S D T+ W L+ + P +GH H++ I
Sbjct: 60 SLEGHSEAVISVAFSPT-GKYLASGSGDTTVRFWDLSTE-----TPHFTCQGHRHWVLSI 113
Query: 71 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRR-FEDHTKDVLSVAF-----SVDNRQIVSS 124
S DG SG + + LWD + GK R H+K + +++ + + R + SS
Sbjct: 114 SWSPDGKTLASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMASS 173
Query: 125 SRDKTIKLWNTLA-HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNC 183
S+D ++++W+T A C+ + GH+ V+C+R+ + ++ SA DR +KVW +
Sbjct: 174 SKDGSVRVWDTTAGRCERILT--GHTQSVTCLRWGGDG---LLYSASQDRTIKVWRAHDG 228
Query: 184 KLKINHSGHTGYLNTVTVSPDGSL 207
L GH ++NT+ +S D +L
Sbjct: 229 VLCRTLQGHGHWVNTMALSTDYAL 252
Score = 197 (74.4 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 67/240 (27%), Positives = 114/240 (47%)
Query: 12 LNGHNGWVTQIATNPKFPDTIL-SCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
L GH VT + D +L S S+D T+ +W+ D GV + L+GH H+++ +
Sbjct: 193 LTGHTQSVTCLRWGG---DGLLYSASQDRTIKVWR-AHD----GVLCRTLQGHGHWVNTM 244
Query: 71 VLSSDGNYAL-SGSWDK---TLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSR 126
LS+D YAL +G+++ ++ DL + + +D ++ ++VS S
Sbjct: 245 ALSTD--YALRTGAFEPAEASINAQDLQG--SLQELKDRALRRYNLVRGQGPERLVSGSD 300
Query: 127 DKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLK 186
D T+ +W+ K GH ++ V FSP+ + II SA +D+ +K+W+ K
Sbjct: 301 DFTLFMWSPAEDKKPLARMTGHQALINQVLFSPDSR--IIASASFDKSIKLWDGRTGKYL 358
Query: 187 INHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPN 245
+ GH + + S D L SG D +WD+ K L H D + A+ +SP+
Sbjct: 359 ASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPD 418
Score = 138 (53.6 bits), Expect = 9.8e-10, Sum P(2) = 9.8e-10
Identities = 40/156 (25%), Positives = 73/156 (46%)
Query: 94 AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCK-FTIVEDGHSDWV 152
A + T E H++ V+SVAFS + + S S D T++ W+ FT GH WV
Sbjct: 53 AVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTC--QGHRHWV 110
Query: 153 SCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINH--SGHTGYLNTVT-----VSPDG 205
+ +SP+ + + S + + +W+ + K ++ +GH+ ++ ++ +P+
Sbjct: 111 LSISWSPDGKT--LASGCKNGQILLWDPSTGK-QVGRVLAGHSKWITGLSWEPLHANPEC 167
Query: 206 SLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITAL 240
AS KD + +WD G+ L H +T L
Sbjct: 168 RYMASSSKDGSVRVWDTTAGRCERILTGHTQSVTCL 203
Score = 74 (31.1 bits), Expect = 2.7e-21, Sum P(2) = 2.7e-21
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 350 LAWSTDGQTLFAGYSDNTIRVWQV 373
+AWS D + L +G SD+T++VW V
Sbjct: 371 IAWSADSRLLVSGSSDSTLKVWDV 394
Score = 67 (28.6 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 334 DVVSQSTKADPP----MCLSLAWSTDGQTLFAGYSDNTIRVWQ 372
DV +Q AD P ++ WS DGQ + +G D +R+W+
Sbjct: 393 DVKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKDKCLRIWR 435
Score = 53 (23.7 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 350 LAWSTDGQTLFAGYSDNTIRVWQ 372
L W DG L++ D TI+VW+
Sbjct: 203 LRWGGDG-LLYSASQDRTIKVWR 224
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 236 (88.1 bits), Expect = 3.0e-21, Sum P(2) = 3.0e-21
Identities = 89/325 (27%), Positives = 142/325 (43%)
Query: 1 MSTETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKR- 59
+STET T GH WV I+ +P C ++ +++W D + G R
Sbjct: 143 LSTETPHF--TCKGHRHWVLSISWSPDGRKLASGC-KNGQILLW-----DPSTGKQVGRT 194
Query: 60 LKGHSHFISDIV-----LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 114
L GHS +I+ + + + Y S S D ++R+WD AG+ R HT+ V + +
Sbjct: 195 LAGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIWDTTAGRCERILTGHTQSVTCLRW 254
Query: 115 SVDNRQIVSSSRDKTIKLWNTLAH----CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAG 170
D + S+S+D+TIK+W AH C+ T+ GH WV+ + S ++
Sbjct: 255 GGDGL-LYSASQDRTIKVWR--AHDGVLCR-TL--QGHGHWVNTMALSTDYALRTGAFEP 308
Query: 171 WDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWD-LNDGKHLH 229
+ V +L ++ + Y N V L SG D LW D K L
Sbjct: 309 AEASVNPQDLQGSLQELKERALSRY-NLVRGQGPERL-VSGSDDFTLFLWSPAEDKKPLT 366
Query: 230 TLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSV 288
+ H +I + FSP+ ++ S + KS + L+ GK V +
Sbjct: 367 RMTGHQALINQVLFSPDS-----RIVASASFDKS-IKLWDGRTGKYLASLRGHVAAVYQI 420
Query: 289 AFSVDNRQIVSSSRDKTIKLWNTLA 313
A+S D+R +VS S D T+K+W+ A
Sbjct: 421 AWSADSRLLVSGSSDSTLKVWDVKA 445
Score = 236 (88.1 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 51/150 (34%), Positives = 79/150 (52%)
Query: 29 PDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTL 88
P+ ++S S D TL +W D P R+ GH I+ ++ S D S S+DK++
Sbjct: 341 PERLVSGSDDFTLFLWSPAEDKK----PLTRMTGHQALINQVLFSPDSRIVASASFDKSI 396
Query: 89 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGH 148
+LWD GK H V +A+S D+R +VS S D T+K+W+ A K + GH
Sbjct: 397 KLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQ-KLAMDLPGH 455
Query: 149 SDWVSCVRFSPNHQNPIIVSAGWDRMVKVW 178
+D V V +SP+ Q + S G D+ +++W
Sbjct: 456 ADEVYAVDWSPDGQR--VASGGKDKCLRIW 483
Score = 225 (84.3 bits), Expect = 7.7e-20, Sum P(2) = 7.7e-20
Identities = 55/188 (29%), Positives = 89/188 (47%)
Query: 60 LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 119
L+GHS + + S G Y SGS D T+R WDL+ + H VLS+++S D R
Sbjct: 110 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGR 169
Query: 120 QIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNP---IIVSAGWDRMVK 176
++ S ++ I LW+ + GHS W++ + + P H NP + S+ D V+
Sbjct: 170 KLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVR 229
Query: 177 VWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HND 235
+W+ T + + +GHT + + DG L S +D +W +DG TL H
Sbjct: 230 IWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGHGH 288
Query: 236 IITALCFS 243
+ + S
Sbjct: 289 WVNTMALS 296
Score = 216 (81.1 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 60/204 (29%), Positives = 103/204 (50%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
+L GH+ V +A +P + S S D T+ W L+ + P KGH H++ I
Sbjct: 109 SLEGHSEAVISVAFSPT-GKYLASGSGDTTVRFWDLSTE-----TPHFTCKGHRHWVLSI 162
Query: 71 VLSSDGNYALSGSWDKTLRLWDLAAGKTT-RRFEDHTKDVLSVAF-----SVDNRQIVSS 124
S DG SG + + LWD + GK R H+K + +++ + + R + SS
Sbjct: 163 SWSPDGRKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASS 222
Query: 125 SRDKTIKLWNTLA-HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNC 183
S+D ++++W+T A C+ + GH+ V+C+R+ + ++ SA DR +KVW +
Sbjct: 223 SKDGSVRIWDTTAGRCERILT--GHTQSVTCLRWGGDG---LLYSASQDRTIKVWRAHDG 277
Query: 184 KLKINHSGHTGYLNTVTVSPDGSL 207
L GH ++NT+ +S D +L
Sbjct: 278 VLCRTLQGHGHWVNTMALSTDYAL 301
Score = 193 (73.0 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 66/240 (27%), Positives = 114/240 (47%)
Query: 12 LNGHNGWVTQIATNPKFPDTIL-SCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
L GH VT + D +L S S+D T+ +W+ D GV + L+GH H+++ +
Sbjct: 242 LTGHTQSVTCLRWGG---DGLLYSASQDRTIKVWR-AHD----GVLCRTLQGHGHWVNTM 293
Query: 71 VLSSDGNYAL-SGSWDK---TLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSR 126
LS+D YAL +G+++ ++ DL + + ++ ++ ++VS S
Sbjct: 294 ALSTD--YALRTGAFEPAEASVNPQDLQG--SLQELKERALSRYNLVRGQGPERLVSGSD 349
Query: 127 DKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLK 186
D T+ LW+ K GH ++ V FSP+ + I+ SA +D+ +K+W+ K
Sbjct: 350 DFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSR--IVASASFDKSIKLWDGRTGKYL 407
Query: 187 INHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPN 245
+ GH + + S D L SG D +WD+ K L H D + A+ +SP+
Sbjct: 408 ASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADEVYAVDWSPD 467
Score = 139 (54.0 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 40/155 (25%), Positives = 72/155 (46%)
Query: 94 AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCK-FTIVEDGHSDWV 152
A + T E H++ V+SVAFS + + S S D T++ W+ FT GH WV
Sbjct: 102 AVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTC--KGHRHWV 159
Query: 153 SCVRFSPNHQNPIIVSAGWDRMVKVWN-LTNCKLKINHSGHTGYLNTVT-----VSPDGS 206
+ +SP+ + + S + + +W+ T ++ +GH+ ++ ++ +P+
Sbjct: 160 LSISWSPDGRK--LASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECR 217
Query: 207 LCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITAL 240
AS KD + +WD G+ L H +T L
Sbjct: 218 YVASSSKDGSVRIWDTTAGRCERILTGHTQSVTCL 252
Score = 74 (31.1 bits), Expect = 3.0e-21, Sum P(2) = 3.0e-21
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 350 LAWSTDGQTLFAGYSDNTIRVWQV 373
+AWS D + L +G SD+T++VW V
Sbjct: 420 IAWSADSRLLVSGSSDSTLKVWDV 443
Score = 62 (26.9 bits), Expect = 5.3e-20, Sum P(2) = 5.3e-20
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 334 DVVSQSTKADPP----MCLSLAWSTDGQTLFAGYSDNTIRVWQ 372
DV +Q D P ++ WS DGQ + +G D +R+W+
Sbjct: 442 DVKAQKLAMDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIWR 484
Score = 53 (23.7 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 350 LAWSTDGQTLFAGYSDNTIRVWQ 372
L W DG L++ D TI+VW+
Sbjct: 252 LRWGGDG-LLYSASQDRTIKVWR 273
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 257 (95.5 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 72/261 (27%), Positives = 126/261 (48%)
Query: 66 FISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSS 125
++ I S DG Y ++G+ D+ ++LWDL+ K F H +D+ S+ FS + R IVS S
Sbjct: 362 YVRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGS 421
Query: 126 RDKTIKLWNT-LAHCKFTI-VEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNC 183
D+T +LW+ C + +E+G V+ + SPN Q I D++++VW+++
Sbjct: 422 GDRTARLWDVETGQCILKLEIENG----VTAIAISPNDQ--FIAVGSLDQIIRVWSVSGT 475
Query: 184 KLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLN------------DG--KHLH 229
++ GH + ++ SPD S+ SG D +W+L +G K +
Sbjct: 476 LVE-RLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATY 534
Query: 230 TLVHNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVA 289
T H D + ++ SP+ + +S + +S + + + G+ V+SV
Sbjct: 535 T-GHTDFVLSVAVSPDSRW-----GLSGSKDRS-MQFWDLQTGQSYLTCQGHKNSVISVC 587
Query: 290 FSVDNRQIVSSSRDKTIKLWN 310
FS D RQ S S D ++W+
Sbjct: 588 FSPDGRQFASGSGDLRARIWS 608
Score = 221 (82.9 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 67/234 (28%), Positives = 114/234 (48%)
Query: 5 TLQLRGTLNGHNGWVTQI--ATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKG 62
T ++R +GH + + + N +F I+S S D T +W + +T + + ++
Sbjct: 391 TQKVRYVFSGHEQDIYSLDFSHNGRF---IVSGSGDRTARLWDV---ETGQCILKLEIEN 444
Query: 63 HSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 122
++ I +S + + GS D+ +R+W ++ G R E H + V S+AFS D+ ++
Sbjct: 445 G---VTAIAISPNDQFIAVGSLDQIIRVWSVS-GTLVERLEGHKESVYSIAFSPDSSILL 500
Query: 123 SSSRDKTIKLWNTLAH-------------CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSA 169
S S DKTIK+W A CK T GH+D+V V SP+ + + S
Sbjct: 501 SGSLDKTIKVWELQATRSVGLSAIKPEGICKATYT--GHTDFVLSVAVSPDSRWGL--SG 556
Query: 170 GWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLN 223
DR ++ W+L + + GH + +V SPDG ASG D+ A +W ++
Sbjct: 557 SKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSGDLRARIWSID 610
Score = 214 (80.4 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 76/279 (27%), Positives = 136/279 (48%)
Query: 104 DHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCK-FTIVE---DGHSD-WVSCVRFS 158
+H V V FS +N + +++ ++ +++ K FT+ E D D +V + FS
Sbjct: 311 EHPSVVCCVKFS-NNGKYLATGCNQAANVFDVQTGKKLFTLHEESPDPSRDLYVRTIAFS 369
Query: 159 PNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAM 218
P+ + +V+ DR +K+W+L+ K++ SGH + ++ S +G SG D A
Sbjct: 370 PDGK--YLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTAR 427
Query: 219 LWDLNDGKHLHTLVHNDIITALCFSPNRSFQKI-KLD-ISRTLQKSNLILYPINHGKMET 276
LWD+ G+ + L + +TA+ SPN F + LD I R S ++ + G E+
Sbjct: 428 LWDVETGQCILKLEIENGVTAIAISPNDQFIAVGSLDQIIRVWSVSGTLVERLE-GHKES 486
Query: 277 PFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKM-VEELRPDV 335
V S+AFS D+ ++S S DKTIK+W A T+ + + ++P+
Sbjct: 487 --------VYSIAFSPDSSILLSGSLDKTIKVWELQA----------TRSVGLSAIKPEG 528
Query: 336 VSQST-KADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQV 373
+ ++T LS+A S D + +G D +++ W +
Sbjct: 529 ICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDL 567
Score = 51 (23.0 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 348 LSLAWSTDGQTLFAGYSDNTIRVWQVSVTS 377
+S+ +S DG+ +G D R+W + S
Sbjct: 584 ISVCFSPDGRQFASGSGDLRARIWSIDPAS 613
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 253 (94.1 bits), Expect = 5.2e-19, P = 5.2e-19
Identities = 66/223 (29%), Positives = 105/223 (47%)
Query: 1 MSTETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRL 60
M +T L+GH+G V ++ +P + +LS S D T+ +W L G
Sbjct: 484 MDEKTSSESKILHGHSGPVYGVSFSPD-RNYLLSSSEDGTIRLWSLQTFTCLVGY----- 537
Query: 61 KGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ 120
KGH++ + D S G Y +SG D+ RLW + R F H DV F ++
Sbjct: 538 KGHNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNY 597
Query: 121 IVSSSRDKTIKLWNTL-AHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
+ + S D+T++LW+ L +C + GH + + FSPN + + S D V +W+
Sbjct: 598 VATGSSDRTVRLWDVLNGNC--VRIFTGHKGPIHSLAFSPNGK--FLASGSTDGRVLLWD 653
Query: 180 LTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
+ + + GHTG + + S DG + ASG D LWD+
Sbjct: 654 IGHGLMIAELKGHTGTIYALKFSRDGEIIASGSIDNTVRLWDV 696
Score = 249 (92.7 bits), Expect = 3.5e-21, Sum P(2) = 3.5e-21
Identities = 63/187 (33%), Positives = 88/187 (47%)
Query: 58 KRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 117
K L GHS + + S D NY LS S D T+RLW L ++ H V FS
Sbjct: 493 KILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSPF 552
Query: 118 NRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKV 177
VS D+ +LW T H + + GH V+C RF PN + + DR V++
Sbjct: 553 GYYFVSGGHDRVARLWAT-DHYQPLRIFAGHLADVTCTRFHPNSN--YVATGSSDRTVRL 609
Query: 178 WNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDI 236
W++ N +GH G ++++ SP+G ASG D +LWD+ G + L H
Sbjct: 610 WDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIAELKGHTGT 669
Query: 237 ITALCFS 243
I AL FS
Sbjct: 670 IYALKFS 676
Score = 226 (84.6 bits), Expect = 8.2e-16, P = 8.2e-16
Identities = 74/254 (29%), Positives = 114/254 (44%)
Query: 73 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKL 132
++D N S D R+ D ++ H+ V V+FS D ++SSS D TI+L
Sbjct: 466 AADLNLIDKESDDVLERIMDEKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRL 525
Query: 133 WNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCK-LKINHSG 191
W+ L + GH+ V +FSP VS G DR+ ++W + + L+I +G
Sbjct: 526 WS-LQTFTCLVGYKGHNYPVWDTQFSPFGY--YFVSGGHDRVARLWATDHYQPLRI-FAG 581
Query: 192 HTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQK 250
H + P+ + A+G D LWD+ +G + H I +L FSPN F
Sbjct: 582 HLADVTCTRFHPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKF-- 639
Query: 251 IKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWN 310
L T ++L+ I HG M + ++ FS D I S S D T++LW+
Sbjct: 640 --LASGST--DGRVLLWDIGHGLMIAELKGHTGTIYALKFSRDGEIIASGSIDNTVRLWD 695
Query: 311 TLAHCKFTIVDLET 324
+ I D+ET
Sbjct: 696 VMR----AIDDVET 705
Score = 137 (53.3 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 36/123 (29%), Positives = 56/123 (45%)
Query: 14 GHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLS 73
GH VT +P + + + S D T+ +W D G + GH I + S
Sbjct: 581 GHLADVTCTRFHPN-SNYVATGSSDRTVRLW-----DVLNGNCVRIFTGHKGPIHSLAFS 634
Query: 74 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLW 133
+G + SGS D + LWD+ G + HT + ++ FS D I S S D T++LW
Sbjct: 635 PNGKFLASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALKFSRDGEIIASGSIDNTVRLW 694
Query: 134 NTL 136
+ +
Sbjct: 695 DVM 697
Score = 117 (46.2 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 45/183 (24%), Positives = 75/183 (40%)
Query: 67 ISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSR 126
++ + + D + G D T+R+W + K + V S A D I S
Sbjct: 429 LTAVDFTDDSSLIAGGFADSTVRVWSVTPKKLRK--------VKSAA---DLNLIDKESD 477
Query: 127 DKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLK 186
D ++ + + I+ GHS V V FSP+ ++S+ D +++W+L
Sbjct: 478 DVLERIMDEKTSSESKILH-GHSGPVYGVSFSPDRN--YLLSSSEDGTIRLWSLQTFTCL 534
Query: 187 INHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPN 245
+ + GH + SP G SGG D A LW + + L H +T F PN
Sbjct: 535 VGYKGHNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPN 594
Query: 246 RSF 248
++
Sbjct: 595 SNY 597
Score = 65 (27.9 bits), Expect = 3.5e-21, Sum P(2) = 3.5e-21
Identities = 11/25 (44%), Positives = 18/25 (72%)
Query: 349 SLAWSTDGQTLFAGYSDNTIRVWQV 373
+L +S DG+ + +G DNT+R+W V
Sbjct: 672 ALKFSRDGEIIASGSIDNTVRLWDV 696
Score = 51 (23.0 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 349 SLAWSTDGQTLFAGYSDNTIRVWQV 373
SLA+S +G+ L +G +D + +W +
Sbjct: 630 SLAFSPNGKFLASGSTDGRVLLWDI 654
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 247 (92.0 bits), Expect = 3.9e-21, Sum P(2) = 3.9e-21
Identities = 62/187 (33%), Positives = 89/187 (47%)
Query: 58 KRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 117
K L GHS + S D NY LS S D T+RLW L ++ H V FS
Sbjct: 537 KILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPY 596
Query: 118 NRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKV 177
VS D+ +LW T H + + GH V+C RF PN + + DR V++
Sbjct: 597 GYYFVSGGHDRVARLWAT-DHYQPLRIFAGHLADVNCTRFHPNSN--YVATGSADRTVRL 653
Query: 178 WNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDI 236
W++ N +GH G ++++T SP+G A+G D +LWD+ G + L H D
Sbjct: 654 WDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDT 713
Query: 237 ITALCFS 243
+ +L FS
Sbjct: 714 VCSLRFS 720
Score = 231 (86.4 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 64/222 (28%), Positives = 102/222 (45%)
Query: 1 MSTETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRL 60
M +T L GH+G V + +P + +LS S D T+ +W L G
Sbjct: 528 MDEKTASELKILYGHSGPVYGASFSPD-RNYLLSSSEDGTVRLWSLQTFTCLVGY----- 581
Query: 61 KGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ 120
KGH++ + D S G Y +SG D+ RLW + R F H DV F ++
Sbjct: 582 KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNY 641
Query: 121 IVSSSRDKTIKLWNTL-AHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
+ + S D+T++LW+ L +C + GH + + FSPN + + + D V +W+
Sbjct: 642 VATGSADRTVRLWDVLNGNC--VRIFTGHKGPIHSLTFSPNGR--FLATGATDGRVLLWD 697
Query: 180 LTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWD 221
+ + + GHT + ++ S DG + ASG D LWD
Sbjct: 698 IGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 739
Score = 221 (82.9 bits), Expect = 3.4e-15, P = 3.4e-15
Identities = 64/226 (28%), Positives = 102/226 (45%)
Query: 89 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGH 148
R+ D + H+ V +FS D ++SSS D T++LW+ L + GH
Sbjct: 526 RIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWS-LQTFTCLVGYKGH 584
Query: 149 SDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCK-LKINHSGHTGYLNTVTVSPDGSL 207
+ V +FSP VS G DR+ ++W + + L+I +GH +N P+ +
Sbjct: 585 NYPVWDTQFSP--YGYYFVSGGHDRVARLWATDHYQPLRI-FAGHLADVNCTRFHPNSNY 641
Query: 208 CASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLIL 266
A+G D LWD+ +G + H I +L FSPN F ++ ++L
Sbjct: 642 VATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRF------LATGATDGRVLL 695
Query: 267 YPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTL 312
+ I HG M V S+ FS D + S S D T++LW+ +
Sbjct: 696 WDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAV 741
Score = 175 (66.7 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 59/233 (25%), Positives = 97/233 (41%)
Query: 14 GHNG--WVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV 71
GHN W TQ + + +S D +W T++ P + GH ++
Sbjct: 583 GHNYPVWDTQFSPYGYY---FVSGGHDRVARLWA-----TDHYQPLRIFAGHLADVNCTR 634
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
+ NY +GS D+T+RLWD+ G R F H + S+ FS + R + + + D +
Sbjct: 635 FHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVL 694
Query: 132 LWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSG 191
LW+ + H GH+D V +RFS + + I+ S D V++W+ +
Sbjct: 695 LWD-IGHGLMVGELKGHTDTVCSLRFSRDGE--ILASGSMDNTVRLWDAVKAFEDVETDD 751
Query: 192 HTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCFSP 244
T + + P+ S G M HLH N ++ A +SP
Sbjct: 752 FTTATGHINL-PENSQELLLGTYMTKS----TPVVHLHFTRRNLVLAAGAYSP 799
Score = 110 (43.8 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 43/183 (23%), Positives = 74/183 (40%)
Query: 67 ISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSR 126
++ + ++ D + G D T+R+W + K + SV + D I S
Sbjct: 473 LTAVDVTDDSSLIAGGFADSTVRVWSVTP-----------KKLRSVKQAADLSLIDKESD 521
Query: 127 DKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLK 186
D ++ + + I+ GHS V FSP+ ++S+ D V++W+L
Sbjct: 522 DVLERIMDEKTASELKILY-GHSGPVYGASFSPDRN--YLLSSSEDGTVRLWSLQTFTCL 578
Query: 187 INHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPN 245
+ + GH + SP G SGG D A LW + + L H + F PN
Sbjct: 579 VGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPN 638
Query: 246 RSF 248
++
Sbjct: 639 SNY 641
Score = 68 (29.0 bits), Expect = 3.9e-21, Sum P(2) = 3.9e-21
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 346 MCLSLAWSTDGQTLFAGYSDNTIRVW 371
+C SL +S DG+ L +G DNT+R+W
Sbjct: 714 VC-SLRFSRDGEILASGSMDNTVRLW 738
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 239 (89.2 bits), Expect = 4.1e-21, Sum P(2) = 4.1e-21
Identities = 88/330 (26%), Positives = 146/330 (44%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
TL GH WV Q+A +P I + + + IW + G LKGH+ FI+ +
Sbjct: 177 TLKGHTNWVLQVAWSPD-SKKIATAGMEGDIRIW-CPQTGKQLG---STLKGHTKFITGL 231
Query: 71 V-----LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSS 125
L+ S S D T+R+WD + K HT V + + + I S S
Sbjct: 232 SWEPFHLNPKCVRLASSSKDSTIRIWDTESCKNLMSLSGHTMSVTCLKWGGEGL-IYSGS 290
Query: 126 RDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKL 185
+D+T++++NT + V DGH+ WV+ + + ++ ++ + +D K ++
Sbjct: 291 QDRTVRVFNT-TDGRLVRVLDGHAHWVNTLALNTDY---VLRTGSYDHTGKEYDTLEEAQ 346
Query: 186 KINHSGHTGYLNTVTVSPDG-SLCASGGKDMNAMLWDLNDGK-HLHTLV-HNDIITALCF 242
++ + N V G + SG D ++W+ + K + L H +I + F
Sbjct: 347 RVALERY----NDVKAKSKGMEILISGSDDFTVIMWNPSVTKTSISRLTGHQQLINLVSF 402
Query: 243 SPN-RSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSS 301
SP+ R F D KS + L+ GK F V V +S D+R +VS S
Sbjct: 403 SPDGRYFASASFD------KS-IKLWDGQSGKFLGNFRGHVGAVYQVCWSSDSRYLVSGS 455
Query: 302 RDKTIKLWNTLAHCKFTIVDLETKKMVEEL 331
+D T+K+W D++TKKM +EL
Sbjct: 456 KDSTLKIW-----------DIKTKKMEKEL 474
Score = 226 (84.6 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 78/308 (25%), Positives = 148/308 (48%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
+++GH V A +P + S D T+ IW D P LKGH++++ +
Sbjct: 135 SMSGHTEAVLNCAFSPDGKGFV-SVGGDTTVRIW-----DIYTSTPTHTLKGHTNWVLQV 188
Query: 71 VLSSDGNYALSGSWDKTLRLWDLAAGKTT-RRFEDHTKDVLSVA---FSVDNR--QIVSS 124
S D + + +R+W GK + HTK + ++ F ++ + ++ SS
Sbjct: 189 AWSPDSKKIATAGMEGDIRIWCPQTGKQLGSTLKGHTKFITGLSWEPFHLNPKCVRLASS 248
Query: 125 SRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCK 184
S+D TI++W+T + CK + GH+ V+C+++ +I S DR V+V+N T+ +
Sbjct: 249 SKDSTIRIWDTES-CKNLMSLSGHTMSVTCLKWGGEG---LIYSGSQDRTVRVFNTTDGR 304
Query: 185 LKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWD-LNDGKHLHTLVHNDIITALCFS 243
L GH ++NT+ ++ D L +G D +D L + + + +ND+
Sbjct: 305 LVRVLDGHAHWVNTLALNTDYVL-RTGSYDHTGKEYDTLEEAQRVALERYNDV------- 356
Query: 244 PNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLS-VAFSVDNRQIVSSSR 302
+ +++ IS + +I++ + K + + +++ V+FS D R S+S
Sbjct: 357 -KAKSKGMEILISGS-DDFTVIMWNPSVTKTSISRLTGHQQLINLVSFSPDGRYFASASF 414
Query: 303 DKTIKLWN 310
DK+IKLW+
Sbjct: 415 DKSIKLWD 422
Score = 224 (83.9 bits), Expect = 6.3e-16, P = 6.3e-16
Identities = 52/159 (32%), Positives = 83/159 (52%)
Query: 22 IATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALS 81
+ K + ++S S D T+I+W + T+ RL GH I+ + S DG Y S
Sbjct: 356 VKAKSKGMEILISGSDDFTVIMWNPSVTKTSIS----RLTGHQQLINLVSFSPDGRYFAS 411
Query: 82 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKF 141
S+DK+++LWD +GK F H V V +S D+R +VS S+D T+K+W+ K
Sbjct: 412 ASFDKSIKLWDGQSGKFLGNFRGHVGAVYQVCWSSDSRYLVSGSKDSTLKIWDIKTK-KM 470
Query: 142 TIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL 180
GH+D V V +SP+ + S DR++++W +
Sbjct: 471 EKELPGHADEVYTVDWSPDGDR--VASGSKDRLLRIWTV 507
Score = 221 (82.9 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 82/308 (26%), Positives = 145/308 (47%)
Query: 7 QLRGTLNGHNGWVTQIATNPKF--PDTI-LSCSRDNTLIIWKLTRDDTNYGVPQKRLKGH 63
QL TL GH ++T ++ P P + L+ S ++ I ++ DT L GH
Sbjct: 216 QLGSTLKGHTKFITGLSWEPFHLNPKCVRLASSSKDSTI--RIW--DTESCKNLMSLSGH 271
Query: 64 SHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 123
+ ++ + +G SGS D+T+R+++ G+ R + H V ++A + D + +
Sbjct: 272 TMSVTCLKWGGEG-LIYSGSQDRTVRVFNTTDGRLVRVLDGHAHWVNTLALNTDY-VLRT 329
Query: 124 SSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNC 183
S D T K ++TL + +E ++D V+ I++S D V +WN +
Sbjct: 330 GSYDHTGKEYDTLEEAQRVALER-YND----VKAKSKGME-ILISGSDDFTVIMWNPSVT 383
Query: 184 KLKINH-SGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALC 241
K I+ +GH +N V+ SPDG AS D + LWD GK L H + +C
Sbjct: 384 KTSISRLTGHQQLINLVSFSPDGRYFASASFDKSIKLWDGQSGKFLGNFRGHVGAVYQVC 443
Query: 242 FSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSS 301
+S + + +S + + S L ++ I KME +V +V +S D ++ S S
Sbjct: 444 WSSDSRYL-----VSGS-KDSTLKIWDIKTKKMEKELPGHADEVYTVDWSPDGDRVASGS 497
Query: 302 RDKTIKLW 309
+D+ +++W
Sbjct: 498 KDRLLRIW 505
Score = 200 (75.5 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 70/246 (28%), Positives = 120/246 (48%)
Query: 3 TETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKG 62
TE+ + +L+GH VT + + I S S+D T+ ++ T D G + L G
Sbjct: 259 TESCKNLMSLSGHTMSVTCLKWGGE--GLIYSGSQDRTVRVFNTT--D---GRLVRVLDG 311
Query: 63 HSHFISDIVLSSDGNYAL-SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 121
H+H+++ + L++D Y L +GS+D T + +D + R + DV + + ++ +
Sbjct: 312 HAHWVNTLALNTD--YVLRTGSYDHTGKEYDTLE-EAQRVALERYNDVKAKSKGMEI--L 366
Query: 122 VSSSRDKTIKLWNTLAHCKFTIVE-DGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL 180
+S S D T+ +WN K +I GH ++ V FSP+ + SA +D+ +K+W+
Sbjct: 367 ISGSDDFTVIMWNPSV-TKTSISRLTGHQQLINLVSFSPDGR--YFASASFDKSIKLWDG 423
Query: 181 TNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITA 239
+ K N GH G + V S D SG KD +WD+ K L H D +
Sbjct: 424 QSGKFLGNFRGHVGAVYQVCWSSDSRYLVSGSKDSTLKIWDIKTKKMEKELPGHADEVYT 483
Query: 240 LCFSPN 245
+ +SP+
Sbjct: 484 VDWSPD 489
Score = 70 (29.7 bits), Expect = 4.1e-21, Sum P(2) = 4.1e-21
Identities = 19/55 (34%), Positives = 27/55 (49%)
Query: 319 IVDLETKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQV 373
I D++TKKM +EL P + D WS DG + +G D +R+W V
Sbjct: 462 IWDIKTKKMEKEL-PGHADEVYTVD--------WSPDGDRVASGSKDRLLRIWTV 507
Score = 63 (27.2 bits), Expect = 9.9e-19, Sum P(2) = 9.9e-19
Identities = 8/24 (33%), Positives = 17/24 (70%)
Query: 350 LAWSTDGQTLFAGYSDNTIRVWQV 373
+ WS+D + L +G D+T+++W +
Sbjct: 442 VCWSSDSRYLVSGSKDSTLKIWDI 465
Score = 37 (18.1 bits), Expect = 5.0e-16, Sum P(2) = 5.0e-16
Identities = 6/22 (27%), Positives = 14/22 (63%)
Query: 350 LAWSTDGQTLFAGYSDNTIRVW 371
+++S DG+ + D +I++W
Sbjct: 400 VSFSPDGRYFASASFDKSIKLW 421
>UNIPROTKB|I3L3N5 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005874 InterPro:IPR017252
PANTHER:PTHR22847:SF51 HGNC:HGNC:8574 ChiTaRS:PAFAH1B1
EMBL:AC015799 EMBL:AC005696 Ensembl:ENST00000574468 Bgee:I3L3N5
Uniprot:I3L3N5
Length = 208
Score = 184 (69.8 bits), Expect = 4.3e-21, Sum P(3) = 4.3e-21
Identities = 43/125 (34%), Positives = 62/125 (49%)
Query: 83 SWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNT-LAHCKF 141
S D T++LWD + R H +V SVA + IVS+SRDKTIK+W +C
Sbjct: 1 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVK 60
Query: 142 TIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTV 201
T GH +WV VR PN +I S D+ V+VW + + K H + ++
Sbjct: 61 TFT--GHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 116
Query: 202 SPDGS 206
+P+ S
Sbjct: 117 APESS 121
Score = 154 (59.3 bits), Expect = 1.1e-17, Sum P(3) = 1.1e-17
Identities = 30/103 (29%), Positives = 55/103 (53%)
Query: 58 KRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 117
+ + GH H +S + + +G++ +S S DKT+++W++ G + F H + V V + D
Sbjct: 18 RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD 77
Query: 118 NRQIVSSSRDKTIKLWNTLA-HCKFTIVEDGHSDWVSCVRFSP 159
I S S D+T+++W CK + E H V C+ ++P
Sbjct: 78 GTLIASCSNDQTVRVWVVATKECKAELRE--HEHVVECISWAP 118
Score = 133 (51.9 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 38/129 (29%), Positives = 59/129 (45%)
Query: 125 SRDKTIKLWNTLA-HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNC 183
S D TIKLW+ C T+ GH VS V PN + IVSA D+ +K+W +
Sbjct: 1 SADMTIKLWDFQGFECIRTM--HGHDHNVSSVAIMPNGDH--IVSASRDKTIKMWEVQTG 56
Query: 184 KLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTL-VHNDIITALCF 242
+GH ++ V + DG+L AS D +W + + L H ++ + +
Sbjct: 57 YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 116
Query: 243 SPNRSFQKI 251
+P S+ I
Sbjct: 117 APESSYSSI 125
Score = 121 (47.7 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 31/108 (28%), Positives = 57/108 (52%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
T++GH+ V+ +A P D I+S SRD T+ +W++ T Y V K GH ++ +
Sbjct: 19 TMHGHDHNVSSVAIMPN-GDHIVSASRDKTIKMWEV---QTGYCV--KTFTGHREWVRMV 72
Query: 71 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN 118
+ DG S S D+T+R+W +A + +H V ++++ ++
Sbjct: 73 RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPES 120
Score = 116 (45.9 bits), Expect = 0.00013, P = 0.00013
Identities = 23/72 (31%), Positives = 39/72 (54%)
Query: 62 GHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 121
GH +++ ++ S G + LS + DKTLR+WD + + H V S+ F +
Sbjct: 134 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV 193
Query: 122 VSSSRDKTIKLW 133
V+ S D+T+K+W
Sbjct: 194 VTGSVDQTVKVW 205
Score = 115 (45.5 bits), Expect = 0.00017, P = 0.00017
Identities = 28/85 (32%), Positives = 44/85 (51%)
Query: 10 GTLNGHNGWVTQIA--TNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFI 67
G+ GH+ WV + + KF ILSC+ D TL +W D N K L H HF+
Sbjct: 130 GSEVGHDNWVRGVLFHSGGKF---ILSCADDKTLRVW----DYKNKRC-MKTLNAHEHFV 181
Query: 68 SDIVLSSDGNYALSGSWDKTLRLWD 92
+ + Y ++GS D+T+++W+
Sbjct: 182 TSLDFHKTAPYVVTGSVDQTVKVWE 206
Score = 82 (33.9 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 23/76 (30%), Positives = 39/76 (51%)
Query: 105 HTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTL-AHCKFTIVEDGHSDWVSCVRFSPNHQN 163
H V V F + I+S + DKT+++W+ C T+ + H +V+ + F H+
Sbjct: 135 HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL--NAHEHFVTSLDF---HKT 189
Query: 164 -PIIVSAGWDRMVKVW 178
P +V+ D+ VKVW
Sbjct: 190 APYVVTGSVDQTVKVW 205
Score = 76 (31.8 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 17/77 (22%), Positives = 33/77 (42%)
Query: 145 EDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPD 204
E GH +WV V F + I+S D+ ++VW+ N + + H ++ ++
Sbjct: 132 EVGHDNWVRGVLFHSGGK--FILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKT 189
Query: 205 GSLCASGGKDMNAMLWD 221
+G D +W+
Sbjct: 190 APYVVTGSVDQTVKVWE 206
Score = 59 (25.8 bits), Expect = 4.3e-21, Sum P(3) = 4.3e-21
Identities = 14/53 (26%), Positives = 22/53 (41%)
Query: 191 GHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTL-VHNDIITALCF 242
GH ++ V G S D +WD + + + TL H +T+L F
Sbjct: 134 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDF 186
Score = 46 (21.3 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 285 VLSVAFSVDNRQIVSSSRDKTIKLWN 310
V V F + I+S + DKT+++W+
Sbjct: 139 VRGVLFHSGGKFILSCADDKTLRVWD 164
Score = 44 (20.5 bits), Expect = 4.3e-21, Sum P(3) = 4.3e-21
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 285 VLSVAFSVDNRQIVSSSRDKTIKLW 309
V S+ F +V+ S D+T+K+W
Sbjct: 181 VTSLDFHKTAPYVVTGSVDQTVKVW 205
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 233 (87.1 bits), Expect = 7.3e-21, Sum P(2) = 7.3e-21
Identities = 89/325 (27%), Positives = 142/325 (43%)
Query: 1 MSTETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKR- 59
+STET T GH WV I+ +P C ++ +++W D + G R
Sbjct: 143 LSTETPHF--TCQGHRHWVLSISWSPDGKKLASGC-KNGQILLW-----DPSTGKQVGRA 194
Query: 60 LKGHSHFISDIV-----LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 114
L GHS +I+ + + + Y S S D ++R+WD AG+ R HT+ V + +
Sbjct: 195 LAGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRW 254
Query: 115 SVDNRQIVSSSRDKTIKLWNTLAH----CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAG 170
D + S+S+D+TIK+W AH C+ T+ GH WV+ + S ++
Sbjct: 255 GGDGL-LYSASQDRTIKVWR--AHDGVLCR-TL--QGHGHWVNTMALSTDYALRTGAFEP 308
Query: 171 WDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWD-LNDGKHLH 229
+ V +L ++ + Y N V L SG D LW D K L
Sbjct: 309 AEASVNAQDLRGSLQELKERALSRY-NLVRGRGLERL-VSGSDDFTLFLWSPAEDKKPLA 366
Query: 230 TLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSV 288
+ H +I + FSP+ ++ S + KS + L+ GK V +
Sbjct: 367 RMTGHQALINQVLFSPDS-----RIIASASFDKS-IKLWDGRTGKYLASLRGHVAAVYQI 420
Query: 289 AFSVDNRQIVSSSRDKTIKLWNTLA 313
A+S D+R +VS S D T+K+W+ A
Sbjct: 421 AWSADSRLLVSGSSDSTLKVWDVKA 445
Score = 227 (85.0 bits), Expect = 4.3e-20, Sum P(2) = 4.3e-20
Identities = 55/188 (29%), Positives = 89/188 (47%)
Query: 60 LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 119
L+GHS + + S G Y SGS D T+R WDL+ + H VLS+++S D +
Sbjct: 110 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGK 169
Query: 120 QIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNP---IIVSAGWDRMVK 176
++ S ++ I LW+ + GHS W++ + + P H NP + S+ D V+
Sbjct: 170 KLASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPLHANPECRYVASSSKDGSVR 229
Query: 177 VWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HND 235
VW+ T + + +GHT + + DG L S +D +W +DG TL H
Sbjct: 230 VWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGHGH 288
Query: 236 IITALCFS 243
+ + S
Sbjct: 289 WVNTMALS 296
Score = 226 (84.6 bits), Expect = 3.2e-16, P = 3.2e-16
Identities = 50/149 (33%), Positives = 77/149 (51%)
Query: 30 DTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLR 89
+ ++S S D TL +W D P R+ GH I+ ++ S D S S+DK+++
Sbjct: 342 ERLVSGSDDFTLFLWSPAEDKK----PLARMTGHQALINQVLFSPDSRIIASASFDKSIK 397
Query: 90 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHS 149
LWD GK H V +A+S D+R +VS S D T+K+W+ A K GH+
Sbjct: 398 LWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQ-KLAADLPGHA 456
Query: 150 DWVSCVRFSPNHQNPIIVSAGWDRMVKVW 178
D V V +SP+ Q + S G D+ +++W
Sbjct: 457 DEVYAVDWSPDGQR--VASGGKDKCLRIW 483
Score = 212 (79.7 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 59/204 (28%), Positives = 104/204 (50%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
+L GH+ V +A +P + S S D T+ W L+ + P +GH H++ I
Sbjct: 109 SLEGHSEAVISVAFSPT-GKYLASGSGDTTVRFWDLSTE-----TPHFTCQGHRHWVLSI 162
Query: 71 VLSSDGNYALSGSWDKTLRLWDLAAGKTT-RRFEDHTKDVLSVAF-----SVDNRQIVSS 124
S DG SG + + LWD + GK R H+K + ++++ + + R + SS
Sbjct: 163 SWSPDGKKLASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPLHANPECRYVASS 222
Query: 125 SRDKTIKLWNTLA-HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNC 183
S+D ++++W+T A C+ + GH+ V+C+R+ + ++ SA DR +KVW +
Sbjct: 223 SKDGSVRVWDTTAGRCERILT--GHTQSVTCLRWGGDG---LLYSASQDRTIKVWRAHDG 277
Query: 184 KLKINHSGHTGYLNTVTVSPDGSL 207
L GH ++NT+ +S D +L
Sbjct: 278 VLCRTLQGHGHWVNTMALSTDYAL 301
Score = 194 (73.4 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 67/240 (27%), Positives = 114/240 (47%)
Query: 12 LNGHNGWVTQIATNPKFPDTIL-SCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
L GH VT + D +L S S+D T+ +W+ D GV + L+GH H+++ +
Sbjct: 242 LTGHTQSVTCLRWGG---DGLLYSASQDRTIKVWR-AHD----GVLCRTLQGHGHWVNTM 293
Query: 71 VLSSDGNYAL-SGSWDK---TLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSR 126
LS+D YAL +G+++ ++ DL + + ++ ++ ++VS S
Sbjct: 294 ALSTD--YALRTGAFEPAEASVNAQDLRG--SLQELKERALSRYNLVRGRGLERLVSGSD 349
Query: 127 DKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLK 186
D T+ LW+ K GH ++ V FSP+ + II SA +D+ +K+W+ K
Sbjct: 350 DFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSR--IIASASFDKSIKLWDGRTGKYL 407
Query: 187 INHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPN 245
+ GH + + S D L SG D +WD+ K L H D + A+ +SP+
Sbjct: 408 ASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPD 467
Score = 140 (54.3 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 40/156 (25%), Positives = 73/156 (46%)
Query: 94 AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCK-FTIVEDGHSDWV 152
A + T E H++ V+SVAFS + + S S D T++ W+ FT GH WV
Sbjct: 102 AVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTC--QGHRHWV 159
Query: 153 SCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS--GHTGYLNTVT-----VSPDG 205
+ +SP+ + + S + + +W+ + K ++ + GH+ ++ ++ +P+
Sbjct: 160 LSISWSPDGKK--LASGCKNGQILLWDPSTGK-QVGRALAGHSKWITALSWEPLHANPEC 216
Query: 206 SLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITAL 240
AS KD + +WD G+ L H +T L
Sbjct: 217 RYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCL 252
Score = 122 (48.0 bits), Expect = 0.00018, P = 0.00018
Identities = 37/146 (25%), Positives = 69/146 (47%)
Query: 166 IVSAGWDRMVKVWNLTNCKLKINH-SGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLND 224
+VS D + +W+ K + +GH +N V SPD + AS D + LWD
Sbjct: 344 LVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRT 403
Query: 225 GKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFR 283
GK+L +L H + + +S + +L +S + S L ++ + K+
Sbjct: 404 GKYLASLRGHVAAVYQIAWSADS-----RLLVSGS-SDSTLKVWDVKAQKLAADLPGHAD 457
Query: 284 DVLSVAFSVDNRQIVSSSRDKTIKLW 309
+V +V +S D +++ S +DK +++W
Sbjct: 458 EVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 74 (31.1 bits), Expect = 7.3e-21, Sum P(2) = 7.3e-21
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 350 LAWSTDGQTLFAGYSDNTIRVWQV 373
+AWS D + L +G SD+T++VW V
Sbjct: 420 IAWSADSRLLVSGSSDSTLKVWDV 443
Score = 67 (28.6 bits), Expect = 3.9e-20, Sum P(2) = 3.9e-20
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 334 DVVSQSTKADPP----MCLSLAWSTDGQTLFAGYSDNTIRVWQ 372
DV +Q AD P ++ WS DGQ + +G D +R+W+
Sbjct: 442 DVKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKDKCLRIWR 484
Score = 53 (23.7 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 350 LAWSTDGQTLFAGYSDNTIRVWQ 372
L W DG L++ D TI+VW+
Sbjct: 252 LRWGGDG-LLYSASQDRTIKVWR 273
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 237 (88.5 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 52/150 (34%), Positives = 79/150 (52%)
Query: 29 PDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTL 88
P+ ++S S D TL +W D P R+ GH I+ +V S D S S+DK++
Sbjct: 342 PERLVSGSDDFTLFLWSPAEDKK----PLARMTGHQALINQVVFSPDSRVIASASFDKSI 397
Query: 89 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGH 148
+LWD GK H V +A+S D+R +VS S D T+K+W+ A K + GH
Sbjct: 398 KLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQ-KLSTDLPGH 456
Query: 149 SDWVSCVRFSPNHQNPIIVSAGWDRMVKVW 178
+D V V +SP+ Q + S G D+ +++W
Sbjct: 457 ADEVYAVDWSPDGQR--VASGGKDKCLRIW 484
Score = 233 (87.1 bits), Expect = 7.4e-21, Sum P(2) = 7.4e-21
Identities = 88/325 (27%), Positives = 141/325 (43%)
Query: 1 MSTETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKR- 59
+STET T GH WV I+ +P C ++ +++W D + G R
Sbjct: 144 LSTETPHF--TCQGHRHWVLSISWSPDGKKLASGC-KNGQILLW-----DPSTGKQVGRA 195
Query: 60 LKGHSHFISDIV-----LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 114
L GHS +I+ + + + Y S S D ++R+WD AG+ R H + V + +
Sbjct: 196 LTGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERTLTGHAQSVTCLRW 255
Query: 115 SVDNRQIVSSSRDKTIKLWNTLAH----CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAG 170
D + S+S+D+TIK+W AH C+ T+ GH WV+ + S ++
Sbjct: 256 GGDGL-LYSASQDRTIKVWR--AHDGVLCR-TL--QGHGHWVNTMALSTDYALRTGAFEP 309
Query: 171 WDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWD-LNDGKHLH 229
+ V +L ++ + Y N V L SG D LW D K L
Sbjct: 310 AEASVNAQDLRGSLQELKERALSRY-NLVRGQGPERL-VSGSDDFTLFLWSPAEDKKPLA 367
Query: 230 TLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSV 288
+ H +I + FSP+ ++ S + KS + L+ GK V +
Sbjct: 368 RMTGHQALINQVVFSPDS-----RVIASASFDKS-IKLWDGRTGKYLASLRGHVAAVYQI 421
Query: 289 AFSVDNRQIVSSSRDKTIKLWNTLA 313
A+S D+R +VS S D T+K+W+ A
Sbjct: 422 AWSADSRLLVSGSSDSTLKVWDVKA 446
Score = 226 (84.6 bits), Expect = 5.7e-20, Sum P(2) = 5.7e-20
Identities = 54/188 (28%), Positives = 88/188 (46%)
Query: 60 LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 119
L+GHS + + S G Y SGS D T+R WDL+ + H VLS+++S D +
Sbjct: 111 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGK 170
Query: 120 QIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNP---IIVSAGWDRMVK 176
++ S ++ I LW+ + GHS W++ + + P H NP + S+ D V+
Sbjct: 171 KLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPECRYVASSSKDGSVR 230
Query: 177 VWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HND 235
VW+ T + + +GH + + DG L S +D +W +DG TL H
Sbjct: 231 VWDTTAGRCERTLTGHAQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGHGH 289
Query: 236 IITALCFS 243
+ + S
Sbjct: 290 WVNTMALS 297
Score = 218 (81.8 bits), Expect = 5.7e-19, Sum P(2) = 5.7e-19
Identities = 60/204 (29%), Positives = 105/204 (51%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
+L GH+ V +A +P + S S D T+ W L+ + P +GH H++ I
Sbjct: 110 SLEGHSEAVISVAFSPT-GKYLASGSGDTTVRFWDLSTE-----TPHFTCQGHRHWVLSI 163
Query: 71 VLSSDGNYALSGSWDKTLRLWDLAAGKTT-RRFEDHTKDVLSVAF-----SVDNRQIVSS 124
S DG SG + + LWD + GK R H+K + ++++ + + R + SS
Sbjct: 164 SWSPDGKKLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPECRYVASS 223
Query: 125 SRDKTIKLWNTLA-HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNC 183
S+D ++++W+T A C+ T+ GH+ V+C+R+ + ++ SA DR +KVW +
Sbjct: 224 SKDGSVRVWDTTAGRCERTLT--GHAQSVTCLRWGGDG---LLYSASQDRTIKVWRAHDG 278
Query: 184 KLKINHSGHTGYLNTVTVSPDGSL 207
L GH ++NT+ +S D +L
Sbjct: 279 VLCRTLQGHGHWVNTMALSTDYAL 302
Score = 196 (74.1 bits), Expect = 9.4e-13, P = 9.4e-13
Identities = 67/241 (27%), Positives = 115/241 (47%)
Query: 11 TLNGHNGWVTQIATNPKFPDTIL-SCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISD 69
TL GH VT + D +L S S+D T+ +W+ D GV + L+GH H+++
Sbjct: 242 TLTGHAQSVTCLRWGG---DGLLYSASQDRTIKVWR-AHD----GVLCRTLQGHGHWVNT 293
Query: 70 IVLSSDGNYAL-SGSWDK---TLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSS 125
+ LS+D YAL +G+++ ++ DL + + ++ ++ ++VS S
Sbjct: 294 MALSTD--YALRTGAFEPAEASVNAQDLRG--SLQELKERALSRYNLVRGQGPERLVSGS 349
Query: 126 RDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKL 185
D T+ LW+ K GH ++ V FSP+ + +I SA +D+ +K+W+ K
Sbjct: 350 DDFTLFLWSPAEDKKPLARMTGHQALINQVVFSPDSR--VIASASFDKSIKLWDGRTGKY 407
Query: 186 KINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSP 244
+ GH + + S D L SG D +WD+ K L H D + A+ +SP
Sbjct: 408 LASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLSTDLPGHADEVYAVDWSP 467
Query: 245 N 245
+
Sbjct: 468 D 468
Score = 144 (55.7 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 41/156 (26%), Positives = 74/156 (47%)
Query: 94 AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCK-FTIVEDGHSDWV 152
A + T E H++ V+SVAFS + + S S D T++ W+ FT GH WV
Sbjct: 103 AVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTC--QGHRHWV 160
Query: 153 SCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS--GHTGYLNTVT-----VSPDG 205
+ +SP+ + + S + + +W+ + K ++ + GH+ ++ ++ +P+
Sbjct: 161 LSISWSPDGKK--LASGCKNGQILLWDPSTGK-QVGRALTGHSKWITALSWEPLHANPEC 217
Query: 206 SLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITAL 240
AS KD + +WD G+ TL H +T L
Sbjct: 218 RYVASSSKDGSVRVWDTTAGRCERTLTGHAQSVTCL 253
Score = 74 (31.1 bits), Expect = 7.4e-21, Sum P(2) = 7.4e-21
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 350 LAWSTDGQTLFAGYSDNTIRVWQV 373
+AWS D + L +G SD+T++VW V
Sbjct: 421 IAWSADSRLLVSGSSDSTLKVWDV 444
Score = 64 (27.6 bits), Expect = 8.2e-20, Sum P(2) = 8.2e-20
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 334 DVVSQSTKADPP----MCLSLAWSTDGQTLFAGYSDNTIRVWQ 372
DV +Q D P ++ WS DGQ + +G D +R+W+
Sbjct: 443 DVKAQKLSTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIWR 485
Score = 53 (23.7 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 350 LAWSTDGQTLFAGYSDNTIRVWQ 372
L W DG L++ D TI+VW+
Sbjct: 253 LRWGGDG-LLYSASQDRTIKVWR 274
>UNIPROTKB|J9JHP3 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
Ensembl:ENSCAFT00000044849 Uniprot:J9JHP3
Length = 1215
Score = 259 (96.2 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 75/273 (27%), Positives = 123/273 (45%)
Query: 60 LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 119
++ H+ + S DG S DKTL+++ G+ + H +VL AFS D+R
Sbjct: 619 VRPHTDAVYHACFSEDGQRIASCGVDKTLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDR 678
Query: 120 QIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
I + S DK +K+WN++ V D HS+ V+C F+ N ++ +A D +K+W+
Sbjct: 679 FIATCSVDKKVKIWNSMTG-GLVHVYDEHSEQVNCCHFTNNSHYLLLATASSDCFLKLWD 737
Query: 180 LTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTL-VHNDIIT 238
L + + GHT +N SPD L AS D LWD+ ++ V +
Sbjct: 738 LNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDVKSANERKSINVKQFFLN 797
Query: 239 ALCFSPNRSFQKI------KLDISRTL--QKSNLILYPINHGKMETPFFSLFRDVLSVAF 290
+ P + I D +R + K+ + L+ ++ V V F
Sbjct: 798 SE--EPQEDMEVIVKCCSWSADGTRIMVAAKNKIFLWNMDSCLKVADCRGHLSWVHCVMF 855
Query: 291 SVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLE 323
S D ++SS D+TI+LW T CK + + L+
Sbjct: 856 SPDGSSFLTSSDDQTIRLWETKKVCKNSAIVLK 888
Score = 164 (62.8 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 60/235 (25%), Positives = 103/235 (43%)
Query: 14 GHNGWVTQIATNPKFPD---TILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
GH V I +F D T++S S D+++ +W ++ + L+ H + D
Sbjct: 966 GHKKTVRHI----QFTDDGKTLISSSDDSSIQVWNWQSEEYVF------LQAHQETVKDF 1015
Query: 71 VLSSDGNYALSGSWDKTLR-LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKT 129
L + LS S+D T++ +W + G+ + F H VLS S D + S+S DKT
Sbjct: 1016 KLLKNSKL-LSWSFDGTVKKIWSIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKT 1074
Query: 130 IKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDR-MVKVWNLTN------ 182
K+W+ + GH V C FS + +++ G D +++WN++N
Sbjct: 1075 AKIWSFELLSPLHELR-GHKGCVRCSVFSVDST---LLATGDDNGEIRIWNVSNGELLHL 1130
Query: 183 CKLKINHSG---HTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHN 234
C + G H G++ + SPD + S G + W++ G+ T N
Sbjct: 1131 CAPILVEEGAATHGGWVTDLCFSPDSKMLVSAGGYLK--WWNVVTGESSQTFYTN 1183
Score = 143 (55.4 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 45/189 (23%), Positives = 91/189 (48%)
Query: 32 ILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLW 91
I SC D TL ++K +T G +K H + S+D + + S DK +++W
Sbjct: 638 IASCGVDKTLQVFKA---ET--GEKLLEIKAHEDEVLCCAFSTDDRFIATCSVDKKVKIW 692
Query: 92 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV--SSSRDKTIKLWN-TLAHCKFTIVEDGH 148
+ G +++H++ V F+ ++ ++ ++S D +KLW+ C+ T+ GH
Sbjct: 693 NSMTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASSDCFLKLWDLNQKECRNTMF--GH 750
Query: 149 SDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSL- 207
++ V+ RFSP+ + ++ S D +K+W++ + + + + +LN+ D +
Sbjct: 751 TNSVNHCRFSPDDK--LLASCSADGTLKLWDVKSANERKSINVKQFFLNSEEPQEDMEVI 808
Query: 208 --CASGGKD 214
C S D
Sbjct: 809 VKCCSWSAD 817
Score = 134 (52.2 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 56/251 (22%), Positives = 108/251 (43%)
Query: 67 ISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSR 126
+S LS Y G D + + +L + + H K V + F+ D + ++SSS
Sbjct: 929 VSCCCLSPHLQYIAFGGEDGAVEILELLNNRIFQSRIGHKKTVRHIQFTDDGKTLISSSD 988
Query: 127 DKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVK-VWNLTNCKL 185
D +I++WN + ++ ++ H + V + N + ++S +D VK +W++ ++
Sbjct: 989 DSSIQVWNWQSE-EYVFLQ-AHQETVKDFKLLKNSK---LLSWSFDGTVKKIWSIITGRI 1043
Query: 186 KINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSP 244
+ + H + + +SPD + +S D A +W LH L H + FS
Sbjct: 1044 EKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIWSFELLSPLHELRGHKGCVRCSVFSV 1103
Query: 245 NRSFQKIKLDIS--RTLQKSN-LILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSS 301
+ + D R SN +L+ +E + V + FS D++ +VS+
Sbjct: 1104 DSTLLATGDDNGEIRIWNVSNGELLHLCAPILVEEGAATHGGWVTDLCFSPDSKMLVSAG 1163
Query: 302 RDKTIKLWNTL 312
+K WN +
Sbjct: 1164 G--YLKWWNVV 1172
Score = 127 (49.8 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 43/167 (25%), Positives = 79/167 (47%)
Query: 32 ILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLW 91
+ + S D L +W L + + + + GH++ ++ S D S S D TL+LW
Sbjct: 724 LATASSDCFLKLWDLNQKEC-----RNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLW 778
Query: 92 DLAAGK-----TTRRF----EDHTKD----VLSVAFSVDNRQIVSSSRDKTIKLWNTLAH 138
D+ + ++F E+ +D V ++S D +I+ ++++K I LWN +
Sbjct: 779 DVKSANERKSINVKQFFLNSEEPQEDMEVIVKCCSWSADGTRIMVAAKNK-IFLWN-MDS 836
Query: 139 CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTN-CK 184
C GH WV CV FSP+ + +++ D+ +++W CK
Sbjct: 837 CLKVADCRGHLSWVHCVMFSPDGSS--FLTSSDDQTIRLWETKKVCK 881
Score = 52 (23.4 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 330 ELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVW 371
EL + + QS + ++ DG+TL + D++I+VW
Sbjct: 954 ELLNNRIFQSRIGHKKTVRHIQFTDDGKTLISSSDDSSIQVW 995
Score = 49 (22.3 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 352 WSTDGQTLFAGYSDNTIRVWQ 372
+S DG + D TIR+W+
Sbjct: 855 FSPDGSSFLTSSDDQTIRLWE 875
Score = 45 (20.9 bits), Expect = 7.3e-20, Sum P(2) = 7.3e-20
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 352 WSTDGQTLFAGYSDNTIRVWQVS 374
+S D L G + IR+W VS
Sbjct: 1101 FSVDSTLLATGDDNGEIRIWNVS 1123
>UNIPROTKB|B4DF38 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016787 GO:GO:0005874 HOGENOM:HOG000184015 InterPro:IPR017252
PANTHER:PTHR22847:SF51 UniGene:Hs.77318 HGNC:HGNC:8574
ChiTaRS:PAFAH1B1 EMBL:AC015799 EMBL:AC005696 EMBL:AK293918
IPI:IPI00909586 SMR:B4DF38 STRING:B4DF38 Ensembl:ENST00000451360
UCSC:uc010vqz.2 HOVERGEN:HBG103859 Uniprot:B4DF38
Length = 205
Score = 178 (67.7 bits), Expect = 2.1e-20, Sum P(3) = 2.1e-20
Identities = 41/121 (33%), Positives = 60/121 (49%)
Query: 87 TLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNT-LAHCKFTIVE 145
T++LWD + R H +V SVA + IVS+SRDKTIK+W +C T
Sbjct: 2 TIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT- 60
Query: 146 DGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDG 205
GH +WV VR PN +I S D+ V+VW + + K H + ++ +P+
Sbjct: 61 -GHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPES 117
Query: 206 S 206
S
Sbjct: 118 S 118
Score = 154 (59.3 bits), Expect = 1.1e-17, Sum P(3) = 1.1e-17
Identities = 30/103 (29%), Positives = 55/103 (53%)
Query: 58 KRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 117
+ + GH H +S + + +G++ +S S DKT+++W++ G + F H + V V + D
Sbjct: 15 RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD 74
Query: 118 NRQIVSSSRDKTIKLWNTLA-HCKFTIVEDGHSDWVSCVRFSP 159
I S S D+T+++W CK + E H V C+ ++P
Sbjct: 75 GTLIASCSNDQTVRVWVVATKECKAELRE--HEHVVECISWAP 115
Score = 125 (49.1 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 36/125 (28%), Positives = 57/125 (45%)
Query: 129 TIKLWNTLA-HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKI 187
TIKLW+ C T+ GH VS V PN + IVSA D+ +K+W +
Sbjct: 2 TIKLWDFQGFECIRTM--HGHDHNVSSVAIMPNGDH--IVSASRDKTIKMWEVQTGYCVK 57
Query: 188 NHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTL-VHNDIITALCFSPNR 246
+GH ++ V + DG+L AS D +W + + L H ++ + ++P
Sbjct: 58 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPES 117
Query: 247 SFQKI 251
S+ I
Sbjct: 118 SYSSI 122
Score = 121 (47.7 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 31/108 (28%), Positives = 57/108 (52%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
T++GH+ V+ +A P D I+S SRD T+ +W++ T Y V K GH ++ +
Sbjct: 16 TMHGHDHNVSSVAIMPN-GDHIVSASRDKTIKMWEV---QTGYCV--KTFTGHREWVRMV 69
Query: 71 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN 118
+ DG S S D+T+R+W +A + +H V ++++ ++
Sbjct: 70 RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPES 117
Score = 116 (45.9 bits), Expect = 0.00012, P = 0.00012
Identities = 23/72 (31%), Positives = 39/72 (54%)
Query: 62 GHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 121
GH +++ ++ S G + LS + DKTLR+WD + + H V S+ F +
Sbjct: 131 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV 190
Query: 122 VSSSRDKTIKLW 133
V+ S D+T+K+W
Sbjct: 191 VTGSVDQTVKVW 202
Score = 115 (45.5 bits), Expect = 0.00016, P = 0.00016
Identities = 28/85 (32%), Positives = 44/85 (51%)
Query: 10 GTLNGHNGWVTQIA--TNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFI 67
G+ GH+ WV + + KF ILSC+ D TL +W D N K L H HF+
Sbjct: 127 GSEVGHDNWVRGVLFHSGGKF---ILSCADDKTLRVW----DYKNKRC-MKTLNAHEHFV 178
Query: 68 SDIVLSSDGNYALSGSWDKTLRLWD 92
+ + Y ++GS D+T+++W+
Sbjct: 179 TSLDFHKTAPYVVTGSVDQTVKVWE 203
Score = 82 (33.9 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 23/76 (30%), Positives = 39/76 (51%)
Query: 105 HTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTL-AHCKFTIVEDGHSDWVSCVRFSPNHQN 163
H V V F + I+S + DKT+++W+ C T+ + H +V+ + F H+
Sbjct: 132 HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL--NAHEHFVTSLDF---HKT 186
Query: 164 -PIIVSAGWDRMVKVW 178
P +V+ D+ VKVW
Sbjct: 187 APYVVTGSVDQTVKVW 202
Score = 76 (31.8 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 17/77 (22%), Positives = 33/77 (42%)
Query: 145 EDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPD 204
E GH +WV V F + I+S D+ ++VW+ N + + H ++ ++
Sbjct: 129 EVGHDNWVRGVLFHSGGK--FILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKT 186
Query: 205 GSLCASGGKDMNAMLWD 221
+G D +W+
Sbjct: 187 APYVVTGSVDQTVKVWE 203
Score = 59 (25.8 bits), Expect = 2.1e-20, Sum P(3) = 2.1e-20
Identities = 14/53 (26%), Positives = 22/53 (41%)
Query: 191 GHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTL-VHNDIITALCF 242
GH ++ V G S D +WD + + + TL H +T+L F
Sbjct: 131 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDF 183
Score = 46 (21.3 bits), Expect = 6.1e-16, Sum P(2) = 6.1e-16
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 285 VLSVAFSVDNRQIVSSSRDKTIKLWN 310
V V F + I+S + DKT+++W+
Sbjct: 136 VRGVLFHSGGKFILSCADDKTLRVWD 161
Score = 44 (20.5 bits), Expect = 2.1e-20, Sum P(3) = 2.1e-20
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 285 VLSVAFSVDNRQIVSSSRDKTIKLW 309
V S+ F +V+ S D+T+K+W
Sbjct: 178 VTSLDFHKTAPYVVTGSVDQTVKVW 202
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 261 (96.9 bits), Expect = 2.6e-20, P = 2.6e-20
Identities = 71/215 (33%), Positives = 108/215 (50%)
Query: 12 LNGHNGWV--TQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISD 69
L GH G V T+ ++ +LSCS D ++ W L R TN + Q GH++ + D
Sbjct: 338 LRGHCGPVYSTRFLSDSS---GLLSCSEDMSIRYWDL-RSFTNTVLYQ----GHAYPVWD 389
Query: 70 IVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKT 129
+ +S Y S S D+T RLW R + H DV V F ++ + + S DKT
Sbjct: 390 LDISPCSLYFASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSNYLATGSTDKT 449
Query: 130 IKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINH 189
++LW+T + GH V + FSPN + + SAG D+ +K+W+L + L
Sbjct: 450 VRLWSTQQGNSVRLFT-GHRGPVLALAFSPNGK--YLASAGEDQRLKLWDLASGTLYKEL 506
Query: 190 SGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLND 224
GHT + ++T SPD SL AS D + +WD+ +
Sbjct: 507 RGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRN 541
Score = 237 (88.5 bits), Expect = 4.3e-19, Sum P(2) = 4.3e-19
Identities = 63/200 (31%), Positives = 93/200 (46%)
Query: 49 DDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKD 108
+D + G K L+GH + SD + LS S D ++R WDL + T ++ H
Sbjct: 327 EDDSAGTEMKILRGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRSFTNTVLYQGHAYP 386
Query: 109 VLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVS 168
V + S + S+S D+T +LW+ I GH V CV+F PN + +
Sbjct: 387 VWDLDISPCSLYFASASHDRTARLWSFDRTYPLRIYA-GHLLDVDCVKFHPNSN--YLAT 443
Query: 169 AGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHL 228
D+ V++W+ +GH G + + SP+G AS G+D LWDL G
Sbjct: 444 GSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLY 503
Query: 229 HTLV-HNDIITALCFSPNRS 247
L H D IT+L FSP+ S
Sbjct: 504 KELRGHTDNITSLTFSPDSS 523
Score = 185 (70.2 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 55/221 (24%), Positives = 99/221 (44%)
Query: 92 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDW 151
D +AG + H V S F D+ ++S S D +I+ W+ + T++ GH+
Sbjct: 328 DDSAGTEMKILRGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRSFTN-TVLYQGHAYP 386
Query: 152 VSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNC-KLKINHSGHTGYLNTVTVSPDGSLCAS 210
V + SP + SA DR ++W+ L+I ++GH ++ V P+ + A+
Sbjct: 387 VWDLDISPC--SLYFASASHDRTARLWSFDRTYPLRI-YAGHLLDVDCVKFHPNSNYLAT 443
Query: 211 GGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPI 269
G D LW G + H + AL FSPN + ++ + L L+ +
Sbjct: 444 GSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKY------LASAGEDQRLKLWDL 497
Query: 270 NHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWN 310
G + ++ S+ FS D+ I S+S D ++++W+
Sbjct: 498 ASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWD 538
Score = 55 (24.4 bits), Expect = 4.3e-19, Sum P(2) = 4.3e-19
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 349 SLAWSTDGQTLFAGYSDNTIRVWQVSVT 376
SL +S D + + DN++RVW + T
Sbjct: 515 SLTFSPDSSLIASASMDNSVRVWDIRNT 542
>WB|WBGene00003009 [details] [associations]
symbol:lin-23 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] [GO:0008285 "negative regulation of
cell proliferation" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0040010 GO:GO:0008285 GO:GO:0051301 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0040011 GO:GO:0048812 SUPFAM:SSF81383
GO:GO:0007049 GO:GO:0040035 GO:GO:0040015 EMBL:FO080748
HOGENOM:HOG000006638 KO:K03362 GeneTree:ENSGT00690000101849
EMBL:AF275253 PIR:T16607 RefSeq:NP_495285.1 UniGene:Cel.17632
ProteinModelPortal:Q09990 SMR:Q09990 STRING:Q09990 PaxDb:Q09990
EnsemblMetazoa:K10B2.1 GeneID:174058 KEGG:cel:CELE_K10B2.1
UCSC:K10B2.1 CTD:174058 WormBase:K10B2.1 InParanoid:Q09990
OMA:IKVWSMD NextBio:882327 Uniprot:Q09990
Length = 665
Score = 261 (96.9 bits), Expect = 3.9e-20, P = 3.9e-20
Identities = 90/293 (30%), Positives = 136/293 (46%)
Query: 30 DTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLR 89
D I+S RDNT+ IW D +Y + L GH+ + + L D +SGS D T+R
Sbjct: 233 DKIVSGLRDNTIKIW----DRKDYSC-SRILSGHTGSV--LCLQYDNRVIISGSSDATVR 285
Query: 90 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTI--VEDG 147
+WD+ G+ + H + VL + F+ N +V+ S+D++I +W+ ++ TI V G
Sbjct: 286 VWDVETGECIKTLIHHCEAVLHLRFA--NGIMVTCSKDRSIAVWDMVSPRDITIRRVLVG 343
Query: 148 HSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSL 207
H V+ V F + IVSA DR +KVW++ + +GH + + G L
Sbjct: 344 HRAAVNVVDFDDRY----IVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYR--GRL 397
Query: 208 CASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQ-----KIKL-DISRTLQ 260
SG D LWD++ G L L H +++ + F R KIK+ D+ L
Sbjct: 398 VVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRFDEKRIVSGAYDGKIKVWDLQAALD 457
Query: 261 KSNLILYPINHGKMETPFFSLFRDVLSV-AFSVDNRQIVSSSRDKTIKLWNTL 312
L E SL + V D+ QIVSSS D TI +W+ L
Sbjct: 458 PRAL--------SSEICLCSLVQHTGRVFRLQFDDFQIVSSSHDDTILIWDFL 502
Score = 176 (67.0 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 66/247 (26%), Positives = 114/247 (46%)
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
L D + +SG D T+++WD +R HT VL + + DNR I+S S D T++
Sbjct: 228 LQYDDDKIVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQY--DNRVIISGSSDATVR 285
Query: 132 LWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCK-LKINH 189
+W+ C T++ H + V +RF+ N I+V+ DR + VW++ + + + I
Sbjct: 286 VWDVETGECIKTLIH--HCEAVLHLRFA----NGIMVTCSKDRSIAVWDMVSPRDITIRR 339
Query: 190 S--GHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNR 246
GH +N V + ASG D +W ++ + + TL H I L +
Sbjct: 340 VLVGHRAAVNVVDFDDRYIVSASG--DRTIKVWSMDTLEFVRTLAGHRRGIACLQY---- 393
Query: 247 SFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTI 306
+ +L +S + + + L+ I+ G V + F D ++IVS + D I
Sbjct: 394 ---RGRLVVSGS-SDNTIRLWDIHSGVCLRVLEGHEELVRCIRF--DEKRIVSGAYDGKI 447
Query: 307 KLWNTLA 313
K+W+ A
Sbjct: 448 KVWDLQA 454
>UNIPROTKB|Q09990 [details] [associations]
symbol:lin-23 "F-box/WD repeat-containing protein lin-23"
species:6239 "Caenorhabditis elegans" [GO:0005737 "cytoplasm"
evidence=NAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0008285
GO:GO:0051301 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010171 GO:GO:0040011
GO:GO:0048812 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0040035
GO:GO:0040015 EMBL:FO080748 HOGENOM:HOG000006638 KO:K03362
GeneTree:ENSGT00690000101849 EMBL:AF275253 PIR:T16607
RefSeq:NP_495285.1 UniGene:Cel.17632 ProteinModelPortal:Q09990
SMR:Q09990 STRING:Q09990 PaxDb:Q09990 EnsemblMetazoa:K10B2.1
GeneID:174058 KEGG:cel:CELE_K10B2.1 UCSC:K10B2.1 CTD:174058
WormBase:K10B2.1 InParanoid:Q09990 OMA:IKVWSMD NextBio:882327
Uniprot:Q09990
Length = 665
Score = 261 (96.9 bits), Expect = 3.9e-20, P = 3.9e-20
Identities = 90/293 (30%), Positives = 136/293 (46%)
Query: 30 DTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLR 89
D I+S RDNT+ IW D +Y + L GH+ + + L D +SGS D T+R
Sbjct: 233 DKIVSGLRDNTIKIW----DRKDYSC-SRILSGHTGSV--LCLQYDNRVIISGSSDATVR 285
Query: 90 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTI--VEDG 147
+WD+ G+ + H + VL + F+ N +V+ S+D++I +W+ ++ TI V G
Sbjct: 286 VWDVETGECIKTLIHHCEAVLHLRFA--NGIMVTCSKDRSIAVWDMVSPRDITIRRVLVG 343
Query: 148 HSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSL 207
H V+ V F + IVSA DR +KVW++ + +GH + + G L
Sbjct: 344 HRAAVNVVDFDDRY----IVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYR--GRL 397
Query: 208 CASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQ-----KIKL-DISRTLQ 260
SG D LWD++ G L L H +++ + F R KIK+ D+ L
Sbjct: 398 VVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRFDEKRIVSGAYDGKIKVWDLQAALD 457
Query: 261 KSNLILYPINHGKMETPFFSLFRDVLSV-AFSVDNRQIVSSSRDKTIKLWNTL 312
L E SL + V D+ QIVSSS D TI +W+ L
Sbjct: 458 PRAL--------SSEICLCSLVQHTGRVFRLQFDDFQIVSSSHDDTILIWDFL 502
Score = 176 (67.0 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 66/247 (26%), Positives = 114/247 (46%)
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
L D + +SG D T+++WD +R HT VL + + DNR I+S S D T++
Sbjct: 228 LQYDDDKIVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQY--DNRVIISGSSDATVR 285
Query: 132 LWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCK-LKINH 189
+W+ C T++ H + V +RF+ N I+V+ DR + VW++ + + + I
Sbjct: 286 VWDVETGECIKTLIH--HCEAVLHLRFA----NGIMVTCSKDRSIAVWDMVSPRDITIRR 339
Query: 190 S--GHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNR 246
GH +N V + ASG D +W ++ + + TL H I L +
Sbjct: 340 VLVGHRAAVNVVDFDDRYIVSASG--DRTIKVWSMDTLEFVRTLAGHRRGIACLQY---- 393
Query: 247 SFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTI 306
+ +L +S + + + L+ I+ G V + F D ++IVS + D I
Sbjct: 394 ---RGRLVVSGS-SDNTIRLWDIHSGVCLRVLEGHEELVRCIRF--DEKRIVSGAYDGKI 447
Query: 307 KLWNTLA 313
K+W+ A
Sbjct: 448 KVWDLQA 454
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 234 (87.4 bits), Expect = 4.0e-20, Sum P(2) = 4.0e-20
Identities = 79/307 (25%), Positives = 140/307 (45%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
++ GH + + +P T++S S D+T IW D + G P LKGH+ ++ +
Sbjct: 143 SIAGHGEAILATSFSPVSSSTMVSGSGDSTARIW-----DCDTGTPLHTLKGHTSWVLAV 197
Query: 71 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRR-FEDHTKDVLSVAFSVDNRQ------IVS 123
S +G +GS D T+R+WD G+ + H K + S+A+ + Q + S
Sbjct: 198 SYSPNGAMIATGSMDNTVRIWDAKKGQALGAPLKGHVKWITSLAWEPYHLQQSGHPRLAS 257
Query: 124 SSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNC 183
+S+D T+++W+ ++ + IV GH V+CVR+ + I ++ DR +KVWN
Sbjct: 258 ASKDSTVRIWDVISK-RADIVLSGHKGSVTCVRWGGTGK---IYTSSHDRTIKVWNSQTG 313
Query: 184 KLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCFS 243
L S H +N + +S D L + D + + +D + + A +
Sbjct: 314 TLIQTLSAHAHRVNHLALSTDFIL-RTAYHDHTGKVPE-SDADKV-AMAKKRFEKAATIN 370
Query: 244 PNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRD 303
N+ +K+ +S + + + P + K ++V V FS D I S+ D
Sbjct: 371 -NKIVEKL---VSASDDFTMYLWDPESSSKPVARLLGHQKEVNHVTFSPDMAYIASAGFD 426
Query: 304 KTIKLWN 310
+KLWN
Sbjct: 427 NHVKLWN 433
Score = 211 (79.3 bits), Expect = 3.0e-17, Sum P(2) = 3.0e-17
Identities = 84/311 (27%), Positives = 137/311 (44%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
TL GH WV ++ +P I + S DNT+ IW + G P LKGH +I+ +
Sbjct: 186 TLKGHTSWVLAVSYSPNGA-MIATGSMDNTVRIWDAKKGQA-LGAP---LKGHVKWITSL 240
Query: 71 V-----LSSDGNYAL-SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSS 124
L G+ L S S D T+R+WD+ + + H V V + + I +S
Sbjct: 241 AWEPYHLQQSGHPRLASASKDSTVRIWDVISKRADIVLSGHKGSVTCVRWGGTGK-IYTS 299
Query: 125 SRDKTIKLWNTLAHCKFTIVE--DGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTN 182
S D+TIK+WN+ T+++ H+ V+ + S + I+ +A D KV
Sbjct: 300 SHDRTIKVWNSQTG---TLIQTLSAHAHRVNHLALSTDF---ILRTAYHDHTGKVPESDA 353
Query: 183 CKLKINHSGHTGYLNTVTVSPD-GSLCASGGKDMNAMLWDL-NDGKHLHTLV-HNDIITA 239
K+ + + T++ S D LWD + K + L+ H +
Sbjct: 354 DKVAM---AKKRFEKAATINNKIVEKLVSASDDFTMYLWDPESSSKPVARLLGHQKEVNH 410
Query: 240 LCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVS 299
+ FSP+ ++ I+ +++ L+ GK T V FS D+R +VS
Sbjct: 411 VTFSPDMAY------IASAGFDNHVKLWNGRDGKFITTLRGHVGAVYQCCFSADSRLLVS 464
Query: 300 SSRDKTIKLWN 310
SS+D T+K+WN
Sbjct: 465 SSKDTTLKVWN 475
Score = 210 (79.0 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 50/154 (32%), Positives = 76/154 (49%)
Query: 25 NPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSW 84
N K + ++S S D T+ +W D + P RL GH ++ + S D Y S +
Sbjct: 370 NNKIVEKLVSASDDFTMYLW----DPESSSKPVARLLGHQKEVNHVTFSPDMAYIASAGF 425
Query: 85 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIV 144
D ++LW+ GK H V FS D+R +VSSS+D T+K+WN K +
Sbjct: 426 DNHVKLWNGRDGKFITTLRGHVGAVYQCCFSADSRLLVSSSKDTTLKVWNVRTG-KLSED 484
Query: 145 EDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVW 178
GH D V V +SP+ Q + S G D+ +++W
Sbjct: 485 LPGHKDEVFAVDWSPDGQK--VGSGGKDKAIRIW 516
Score = 198 (74.8 bits), Expect = 6.4e-13, P = 6.4e-13
Identities = 69/239 (28%), Positives = 111/239 (46%)
Query: 12 LNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV 71
L+GH G VT + I + S D T+ +W ++ G + L H+H ++ +
Sbjct: 278 LSGHKGSVTCVRWGGT--GKIYTSSHDRTIKVW-----NSQTGTLIQTLSAHAHRVNHLA 330
Query: 72 LSSDGNYALSGSW-DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR---QIVSSSRD 127
LS+D + L ++ D T ++ + A K K A +++N+ ++VS+S D
Sbjct: 331 LSTD--FILRTAYHDHTGKVPESDADKVAM-----AKKRFEKAATINNKIVEKLVSASDD 383
Query: 128 KTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKI 187
T+ LW+ + K GH V+ V FSP+ I SAG+D VK+WN + K
Sbjct: 384 FTMYLWDPESSSKPVARLLGHQKEVNHVTFSPDMA--YIASAGFDNHVKLWNGRDGKFIT 441
Query: 188 NHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPN 245
GH G + S D L S KD +W++ GK L H D + A+ +SP+
Sbjct: 442 TLRGHVGAVYQCCFSADSRLLVSSSKDTTLKVWNVRTGKLSEDLPGHKDEVFAVDWSPD 500
Score = 152 (58.6 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 43/179 (24%), Positives = 83/179 (46%)
Query: 136 LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL-TNCKLKINHSGHTG 194
++ C +I GH + + FSP + ++ +G D ++W+ T L GHT
Sbjct: 137 VSRCSASIA--GHGEAILATSFSPVSSSTMVSGSG-DSTARIWDCDTGTPLH-TLKGHTS 192
Query: 195 YLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDI--ITALCFSPNRSFQKIK 252
++ V+ SP+G++ A+G D +WD G+ L + + IT+L + P Q
Sbjct: 193 WVLAVSYSPNGAMIATGSMDNTVRIWDAKKGQALGAPLKGHVKWITSLAWEPYHLQQSGH 252
Query: 253 LDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNT 311
++ + S + ++ + + + V V + + I +SS D+TIK+WN+
Sbjct: 253 PRLASASKDSTVRIWDVISKRADIVLSGHKGSVTCVRWGGTGK-IYTSSHDRTIKVWNS 310
Score = 107 (42.7 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 39/145 (26%), Positives = 68/145 (46%)
Query: 176 KVWNLTNCKLKINHSGHTGYLNTVTVSP-DGSLCASGGKDMNAMLWDLNDGKHLHTLV-H 233
+V ++ C I +GH + + SP S SG D A +WD + G LHTL H
Sbjct: 133 RVKAVSRCSASI--AGHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTGTPLHTLKGH 190
Query: 234 NDIITALCFSPNRSFQKI-KLDISRTL---QKSNLILYPIN-HGKMETPFFSLFRDVLSV 288
+ A+ +SPN + +D + + +K + P+ H K T SL + +
Sbjct: 191 TSWVLAVSYSPNGAMIATGSMDNTVRIWDAKKGQALGAPLKGHVKWIT---SLAWEPYHL 247
Query: 289 AFSVDNRQIVSSSRDKTIKLWNTLA 313
S R + S+S+D T+++W+ ++
Sbjct: 248 QQSGHPR-LASASKDSTVRIWDVIS 271
Score = 67 (28.6 bits), Expect = 4.0e-20, Sum P(2) = 4.0e-20
Identities = 14/50 (28%), Positives = 24/50 (48%)
Query: 323 ETKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQ 372
+T V +R +S+ ++ WS DGQ + +G D IR+W+
Sbjct: 468 DTTLKVWNVRTGKLSEDLPGHKDEVFAVDWSPDGQKVGSGGKDKAIRIWR 517
Score = 47 (21.6 bits), Expect = 4.9e-18, Sum P(2) = 4.9e-18
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 352 WSTDGQTLFAGYSDNTIRVWQV 373
+S D + L + D T++VW V
Sbjct: 455 FSADSRLLVSSSKDTTLKVWNV 476
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 255 (94.8 bits), Expect = 4.9e-20, P = 4.9e-20
Identities = 88/368 (23%), Positives = 169/368 (45%)
Query: 34 SCSRDNTLIIWKLT-----RDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTL 88
SC L+I KL +D+ + + + L+ H ++++ + G+ ++GS+D+T
Sbjct: 58 SCVEQVKLLICKLQEKVGQKDERKFYL-FRALQAHILPLTNVAFNKSGSCFITGSYDRTC 116
Query: 89 RLWDLAAGKTTRRFEDHTKDVLSVAFSVD-NRQIVSSSRDKTIKLWNT-LAHCKFTIVED 146
++WD A+G+ E H V ++AF+ ++ + S DKT KLW+ C +T
Sbjct: 117 KIWDTASGEELHTLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTF--R 174
Query: 147 GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGS 206
GH+ + C+ F+P Q+ ++ + D K+W++ + + +GH + ++ + G
Sbjct: 175 GHTAEIVCLAFNP--QSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGD 232
Query: 207 LCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLI 265
+G D A+LWD+ G+ +H L H I+ + F+ + S L + +L KS +
Sbjct: 233 RLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCS-----LIATASLDKSCKV 287
Query: 266 LYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAH---CKFTIVDL 322
+ G+ +VL V F+ + I ++S D T ++++T C+
Sbjct: 288 -WDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKG 346
Query: 323 ETKKMVEELRPD-VVSQST-KADPPMCL-----------------SLAWSTDGQTLFAGY 363
E K+ + V++ S K C+ S A++ +G T+ G
Sbjct: 347 EISKVCFNAQGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFNYEGDTIITGS 406
Query: 364 SDNTIRVW 371
DNT R+W
Sbjct: 407 KDNTCRIW 414
Score = 250 (93.1 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 81/304 (26%), Positives = 141/304 (46%)
Query: 12 LNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV 71
L H +T +A N K ++ S D T IW DT G L+GH + + I
Sbjct: 88 LQAHILPLTNVAFN-KSGSCFITGSYDRTCKIW-----DTASGEELHTLEGHRNVVYAIA 141
Query: 72 LSSD-GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 130
++ G+ +GS+DKT +LW GK F HT +++ +AF+ + + + S D T
Sbjct: 142 FNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTA 201
Query: 131 KLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINH- 189
KLW+ + + + + GH + + F N +V+ +D +W++ + + K++
Sbjct: 202 KLWDVESGEEVSTLA-GHFAEIISLCF--NTTGDRLVTGSFDHTAILWDVPSGR-KVHVL 257
Query: 190 SGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFS-PNRS 247
SGH G ++ V + D SL A+ D + +WD G+ L TL+ HND + +CF+ +
Sbjct: 258 SGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQL 317
Query: 248 FQKIKLD-ISRTLQKSNL-ILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKT 305
D SR L + K E + V F+ +++++S DKT
Sbjct: 318 IATASADGTSRVFSTDTFQCLCQLEGHKGE---------ISKVCFNAQGSRVLTASVDKT 368
Query: 306 IKLW 309
++W
Sbjct: 369 SRVW 372
Score = 250 (93.1 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 72/301 (23%), Positives = 136/301 (45%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
TL GH V IA N + D + + S D T +W Y +GH+ I +
Sbjct: 129 TLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFY-----TFRGHTAEIVCL 183
Query: 71 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 130
+ +GS D T +LWD+ +G+ H +++S+ F+ ++V+ S D T
Sbjct: 184 AFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTA 243
Query: 131 KLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS 190
LW+ + K ++ GH +SCV+F N +I +A D+ KVW+ +
Sbjct: 244 ILWDVPSGRKVHVLS-GHRGEISCVQF--NWDCSLIATASLDKSCKVWDAEGGQCLATLL 300
Query: 191 GHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQ 249
GH + V + G L A+ D + ++ + + L L H I+ +CF+ S
Sbjct: 301 GHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGS-- 358
Query: 250 KIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLW 309
++ ++ ++ K++ + + + G ++ S AF+ + I++ S+D T ++W
Sbjct: 359 RV---LTASVDKTSRV-WCVKTGACLQVLEGHSDEIFSCAFNYEGDTIITGSKDNTCRIW 414
Query: 310 N 310
+
Sbjct: 415 H 415
Score = 225 (84.3 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 66/244 (27%), Positives = 111/244 (45%)
Query: 2 STETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLK 61
S ET + T GH + +A NP+ + + S D T +W D G L
Sbjct: 163 SAETGKCFYTFRGHTAEIVCLAFNPQ-STLVATGSMDTTAKLW-----DVESGEEVSTLA 216
Query: 62 GHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 121
GH I + ++ G+ ++GS+D T LWD+ +G+ H ++ V F+ D I
Sbjct: 217 GHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLI 276
Query: 122 VSSSRDKTIKLWNTLA-HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL 180
++S DK+ K+W+ C T++ GH+D V V F N+ +I +A D +V++
Sbjct: 277 ATASLDKSCKVWDAEGGQCLATLL--GHNDEVLDVCF--NYTGQLIATASADGTSRVFST 332
Query: 181 TNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITA 239
+ GH G ++ V + GS + D + +W + G L L H+D I +
Sbjct: 333 DTFQCLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEIFS 392
Query: 240 LCFS 243
F+
Sbjct: 393 CAFN 396
Score = 151 (58.2 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 39/128 (30%), Positives = 64/128 (50%)
Query: 7 QLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHF 66
Q TL GHN V + N I + S D T ++ DT + Q L+GH
Sbjct: 294 QCLATLLGHNDEVLDVCFNYT-GQLIATASADGTSRVFST---DTFQCLCQ--LEGHKGE 347
Query: 67 ISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSR 126
IS + ++ G+ L+ S DKT R+W + G + E H+ ++ S AF+ + I++ S+
Sbjct: 348 ISKVCFNAQGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFNYEGDTIITGSK 407
Query: 127 DKTIKLWN 134
D T ++W+
Sbjct: 408 DNTCRIWH 415
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 261 (96.9 bits), Expect = 5.6e-20, P = 5.6e-20
Identities = 69/207 (33%), Positives = 104/207 (50%)
Query: 28 FPDTILSC-SRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDK 86
F D+ + S D + L RD ++L GHS + + S D Y LS S DK
Sbjct: 480 FQDSYIKLWSLDGKPLKSVLKRDRHKPQENTRKLIGHSGPVYGVSFSPDNKYLLSCSEDK 539
Query: 87 TLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVED 146
T+RLW L ++ HT+ V V FS V++S D+T +LW T H +
Sbjct: 540 TVRLWSLDTYTALVSYKGHTQPVWDVKFSPLGHYFVTASHDQTARLWAT-DHIYPLRIFA 598
Query: 147 GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT--NCKLKINHSGHTGYLNTVTVSPD 204
GH + V CV F PN N + + D+ ++W++ NC +++ GHT +N + VSPD
Sbjct: 599 GHINDVDCVEFHPN-SNYVFTGSS-DKTCRMWDVHTGNC-VRV-FLGHTNSVNCLAVSPD 654
Query: 205 GSLCASGGKDMNAMLWDLNDGKHLHTL 231
G ASGG+D +WD+ G+ L ++
Sbjct: 655 GRWLASGGEDGIICVWDIGSGRRLKSM 681
Score = 238 (88.8 bits), Expect = 3.6e-17, P = 3.6e-17
Identities = 64/213 (30%), Positives = 109/213 (51%)
Query: 12 LNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV 71
L GH+G V ++ +P +LSCS D T+ +W L DT + KGH+ + D+
Sbjct: 513 LIGHSGPVYGVSFSPD-NKYLLSCSEDKTVRLWSL---DTYTALVS--YKGHTQPVWDVK 566
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
S G+Y ++ S D+T RLW R F H DV V F ++ + + S DKT +
Sbjct: 567 FSPLGHYFVTASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCR 626
Query: 132 LWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS 190
+W+ +C + GH++ V+C+ SP+ + + S G D ++ VW++ + + +
Sbjct: 627 MWDVHTGNCVRVFL--GHTNSVNCLAVSPDGR--WLASGGEDGIICVWDIGSGRRLKSMR 682
Query: 191 GHT-GYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
GH L ++ S DG++ SG D + +WD+
Sbjct: 683 GHARASLYSLAFSRDGTVLVSGCADNSVRVWDV 715
Score = 196 (74.1 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 56/218 (25%), Positives = 105/218 (48%)
Query: 97 KTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVR 156
+ TR+ H+ V V+FS DN+ ++S S DKT++LW+ + + GH+ V V+
Sbjct: 508 ENTRKLIGHSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYK-GHTQPVWDVK 566
Query: 157 FSP-NHQNPIIVSAGWDRMVKVWNLTNC-KLKINHSGHTGYLNTVTVSPDGSLCASGGKD 214
FSP H V+A D+ ++W + L+I +GH ++ V P+ + +G D
Sbjct: 567 FSPLGHY---FVTASHDQTARLWATDHIYPLRI-FAGHINDVDCVEFHPNSNYVFTGSSD 622
Query: 215 MNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGK 273
+WD++ G + + H + + L SP+ + ++ + + ++ I G+
Sbjct: 623 KTCRMWDVHTGNCVRVFLGHTNSVNCLAVSPDGRW------LASGGEDGIICVWDIGSGR 676
Query: 274 METPFFSLFRDVL-SVAFSVDNRQIVSSSRDKTIKLWN 310
R L S+AFS D +VS D ++++W+
Sbjct: 677 RLKSMRGHARASLYSLAFSRDGTVLVSGCADNSVRVWD 714
Score = 169 (64.5 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 50/190 (26%), Positives = 83/190 (43%)
Query: 2 STETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLK 61
S +T + GH V + +P ++ S D T +W T++ P +
Sbjct: 545 SLDTYTALVSYKGHTQPVWDVKFSP-LGHYFVTASHDQTARLWA-----TDHIYPLRIFA 598
Query: 62 GHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 121
GH + + + + NY +GS DKT R+WD+ G R F HT V +A S D R +
Sbjct: 599 GHINDVDCVEFHPNSNYVFTGSSDKTCRMWDVHTGNCVRVFLGHTNSVNCLAVSPDGRWL 658
Query: 122 VSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT 181
S D I +W+ + + + GH+ S + + ++VS D V+VW++
Sbjct: 659 ASGGEDGIICVWDIGSGRRLKSMR-GHAR-ASLYSLAFSRDGTVLVSGCADNSVRVWDV- 715
Query: 182 NCKLKINHSG 191
K N +G
Sbjct: 716 --KKNTNDAG 723
Score = 167 (63.8 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 69/286 (24%), Positives = 120/286 (41%)
Query: 102 FEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAH-CKFTIVED------------GH 148
F + ++ + F+ D+ + + +D IKLW+ K + D GH
Sbjct: 457 FHNTNNNMTCIEFNDDSTLVAAGFQDSYIKLWSLDGKPLKSVLKRDRHKPQENTRKLIGH 516
Query: 149 SDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLC 208
S V V FSP+ N ++S D+ V++W+L +++ GHT + V SP G
Sbjct: 517 SGPVYGVSFSPD--NKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPLGHYF 574
Query: 209 ASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILY 267
+ D A LW + L H + + + F PN ++ + + K+ ++
Sbjct: 575 VTASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSNYV-----FTGSSDKT-CRMW 628
Query: 268 PINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKM 327
++ G F V +A S D R + S D I +W D+ + +
Sbjct: 629 DVHTGNCVRVFLGHTNSVNCLAVSPDGRWLASGGEDGIICVW-----------DIGSGRR 677
Query: 328 VEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQV 373
++ +R +A SLA+S DG L +G +DN++RVW V
Sbjct: 678 LKSMRGHA-----RAS---LYSLAFSRDGTVLVSGCADNSVRVWDV 715
>MGI|MGI:1913972 [details] [associations]
symbol:Spag16 "sperm associated antigen 16" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IDA] [GO:0005929 "cilium" evidence=IEA]
[GO:0005930 "axoneme" evidence=IDA] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0030030 "cell projection organization" evidence=IEA]
[GO:0035085 "cilium axoneme" evidence=IDA] [GO:0042384 "cilium
assembly" evidence=IDA] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1913972 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086
GeneTree:ENSGT00700000104486 CTD:79582 HOVERGEN:HBG086482
OMA:EGHNHAV OrthoDB:EOG41ZF9F EMBL:AF490391 EMBL:AK014865
EMBL:AK015884 EMBL:AK016618 EMBL:AK083083 EMBL:BC120668
IPI:IPI00177216 IPI:IPI00473221 IPI:IPI00556714 IPI:IPI00556881
RefSeq:NP_001258462.1 RefSeq:NP_080004.1 RefSeq:NP_083436.2
UniGene:Mm.440554 ProteinModelPortal:Q8K450 SMR:Q8K450
DIP:DIP-59752N STRING:Q8K450 PhosphoSite:Q8K450 PaxDb:Q8K450
PRIDE:Q8K450 Ensembl:ENSMUST00000065425 Ensembl:ENSMUST00000113940
GeneID:66722 KEGG:mmu:66722 UCSC:uc007bjg.1 UCSC:uc007bjh.1
UCSC:uc007bji.1 HOGENOM:HOG000256703 InParanoid:Q0VBE7
NextBio:322475 Bgee:Q8K450 CleanEx:MM_SPAG16 Genevestigator:Q8K450
GermOnline:ENSMUSG00000053153 Uniprot:Q8K450
Length = 639
Score = 241 (89.9 bits), Expect = 9.0e-20, Sum P(2) = 9.0e-20
Identities = 78/286 (27%), Positives = 131/286 (45%)
Query: 30 DTILSCSRDNTLIIWKLTRDDTNYGVPQKRL----KGHSHFISDIVLSSDGNYALSGSWD 85
D ++SCS D +WK+ G+PQ + GH+ ++S G+ + S D
Sbjct: 373 DYLISCSEDR---LWKMV------GLPQGNVLLTGSGHTDWLSGCCFHPSGSKLATSSGD 423
Query: 86 KTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAH-CKFTIV 144
T++LWDL G+ T E H V S + + S+S D T K+W+ + C++T+
Sbjct: 424 STIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGDFVASASLDMTSKIWDVNSERCRYTLY 483
Query: 145 EDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPD 204
GH+D V+ + F P N I+++A D+ + VW+ K + + GH +N T +P
Sbjct: 484 --GHTDSVNSIEFFP-FSN-ILLTASADKTLSVWDARTGKCEQSLYGHMHSVNDATFTPR 539
Query: 205 GSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCFSPNR-SFQKIKLDISRTLQKSN 263
G + AS LWD + L +V D+ + S N +F + +++
Sbjct: 540 GHIIASCDARGVTKLWDF---RKLIPIVSIDVGPS---SGNEVNFDQSGRVLAQASANGI 593
Query: 264 LILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLW 309
+ L + G++ +V SV FS + S D TI+LW
Sbjct: 594 IHLLDLKSGQIHK-LVGHESEVHSVVFSHLGENLYSGGSDGTIRLW 638
Score = 193 (73.0 bits), Expect = 6.2e-14, Sum P(2) = 6.2e-14
Identities = 61/237 (25%), Positives = 108/237 (45%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
T +GH W++ +P + + S D+T+ +W D N G L+GH+H +
Sbjct: 397 TGSGHTDWLSGCCFHPS-GSKLATSSGDSTIKLW-----DLNKGECTLTLEGHNHAVWSC 450
Query: 71 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 130
S G++ S S D T ++WD+ + + HT V S+ F + ++++S DKT+
Sbjct: 451 TWHSCGDFVASASLDMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFSNILLTASADKTL 510
Query: 131 KLWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCK--LKI 187
+W+ C+ ++ GH V+ F+P + II S + K+W+ + I
Sbjct: 511 SVWDARTGKCEQSLY--GHMHSVNDATFTP--RGHIIASCDARGVTKLWDFRKLIPIVSI 566
Query: 188 NHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFS 243
+ +G N V G + A + L DL G+ +H LV H + ++ FS
Sbjct: 567 DVGPSSG--NEVNFDQSGRVLAQASANGIIHLLDLKSGQ-IHKLVGHESEVHSVVFS 620
Score = 170 (64.9 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 47/184 (25%), Positives = 78/184 (42%)
Query: 63 HSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 122
H +S IV+ +Y +S S D+ ++ L G HT + F ++
Sbjct: 359 HELPVSCIVMHPCRDYLISCSEDRLWKMVGLPQGNVLLTGSGHTDWLSGCCFHPSGSKLA 418
Query: 123 SSSRDKTIKLWN-TLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT 181
+SS D TIKLW+ C T+ H+ W SC S + SA D K+W++
Sbjct: 419 TSSGDSTIKLWDLNKGECTLTLEGHNHAVW-SCTWHSCGD---FVASASLDMTSKIWDVN 474
Query: 182 NCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITAL 240
+ + + GHT +N++ P ++ + D +WD GK +L H +
Sbjct: 475 SERCRYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDARTGKCEQSLYGHMHSVNDA 534
Query: 241 CFSP 244
F+P
Sbjct: 535 TFTP 538
Score = 135 (52.6 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 42/160 (26%), Positives = 72/160 (45%)
Query: 152 VSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASG 211
VSC+ P ++S DR+ K+ L + + SGHT +L+ P GS A+
Sbjct: 363 VSCIVMHPCRD--YLISCSEDRLWKMVGLPQGNVLLTGSGHTDWLSGCCFHPSGSKLATS 420
Query: 212 GKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPIN 270
D LWDLN G+ TL HN + + + F S +L ++ I + +N
Sbjct: 421 SGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGDFVA-----SASLDMTSKI-WDVN 474
Query: 271 HGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWN 310
+ + V S+ F + ++++S DKT+ +W+
Sbjct: 475 SERCRYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWD 514
Score = 59 (25.8 bits), Expect = 9.0e-20, Sum P(2) = 9.0e-20
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 349 SLAWSTDGQTLFAGYSDNTIRVW 371
S+ +S G+ L++G SD TIR+W
Sbjct: 616 SVVFSHLGENLYSGGSDGTIRLW 638
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 250 (93.1 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 76/324 (23%), Positives = 153/324 (47%)
Query: 60 LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 119
L GH ++ + +S + + + S D T+++W + H + + V ++ ++
Sbjct: 50 LFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGSK 109
Query: 120 QIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
+ S+S DKTI++W+ C ++ GH+++VS + F+P ++VS WD V++WN
Sbjct: 110 YLASASDDKTIRIWDFEKRCSVRCLK-GHTNYVSSIDFNP--LGTLLVSGSWDETVRIWN 166
Query: 180 LTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVH--NDII 237
L + H+ + +V++S DG+LCA+ D A +WD+ G+ L TLV N +
Sbjct: 167 LQDGTCLRMLPAHSEPIISVSISADGTLCATASYDGMARIWDVLSGQCLKTLVEPINVPL 226
Query: 238 TALCFSPNRSFQKIK-LDISRTL--QKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDN 294
+ L F+ NR + + L+ L + N ++ I + T + S+ D S N
Sbjct: 227 SNLQFTENRKYLLVSNLNSQIRLWDYRRNRVVR-IFDSHVNTRY-SMSWDCYSSKNIPKN 284
Query: 295 RQIVSSSRDKTIKLWNTLAHCKFTIVDLE--TKKMVEELRPDVVSQSTK-ADPPMCLSLA 351
+ + ++ + H + ++ E T ++ + ++ S + +D P L
Sbjct: 285 TEALPNNDSSYPDDAESFMHDAYLLIPSEDGTIQITDPSTKIIIDDSIRHSDDPETSLLN 344
Query: 352 WSTDGQTLFAGYSDNTIRVWQVSV 375
++ G + +D +RVW S+
Sbjct: 345 VTSLGPFIITSGTDPYVRVWAPSL 368
Score = 211 (79.3 bits), Expect = 8.4e-15, P = 8.4e-15
Identities = 55/181 (30%), Positives = 98/181 (54%)
Query: 2 STETLQLRGTLNGHNGWVTQI--ATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKR 59
S T +L TL GH ++Q+ AT K+ + S S D T+ IW D +
Sbjct: 82 SALTFRLECTLFGHYRGISQVKWATGSKY---LASASDDKTIRIW-----DFEKRCSVRC 133
Query: 60 LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 119
LKGH++++S I + G +SGSWD+T+R+W+L G R H++ ++SV+ S D
Sbjct: 134 LKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTCLRMLPAHSEPIISVSISADGT 193
Query: 120 QIVSSSRDKTIKLWNTLA-HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVW 178
++S D ++W+ L+ C T+VE + +S ++F+ N + ++VS + +++W
Sbjct: 194 LCATASYDGMARIWDVLSGQCLKTLVEPINVP-LSNLQFTENRKY-LLVS-NLNSQIRLW 250
Query: 179 N 179
+
Sbjct: 251 D 251
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 254 (94.5 bits), Expect = 2.3e-19, P = 2.3e-19
Identities = 64/193 (33%), Positives = 98/193 (50%)
Query: 32 ILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLW 91
+LSCS D ++ W L TN + Q GH++ + D+ +S Y SGS D+T RLW
Sbjct: 357 LLSCSEDMSIRYWDLG-SFTNTVLYQ----GHAYPVWDVDISPYSLYFASGSHDRTARLW 411
Query: 92 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDW 151
R + H DV V F ++ + + S DKT++LW+ + GH
Sbjct: 412 SFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFT-GHRGP 470
Query: 152 VSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASG 211
V + FSPN + + SAG D+ +K+W+L + L GHT + ++T SPD SL AS
Sbjct: 471 VLSLAFSPNGK--YLASAGEDQRLKLWDLASGTLFKELRGHTDNITSLTFSPDSSLIASA 528
Query: 212 GKDMNAMLWDLND 224
D + +WD+ +
Sbjct: 529 SMDNSVRVWDIRN 541
Score = 242 (90.2 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 63/200 (31%), Positives = 93/200 (46%)
Query: 49 DDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKD 108
+D + G K L+GH + +D + LS S D ++R WDL + T ++ H
Sbjct: 327 EDDDVGTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYP 386
Query: 109 VLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVS 168
V V S + S S D+T +LW+ I GH V CV+F PN + +
Sbjct: 387 VWDVDISPYSLYFASGSHDRTARLWSFDRTYPLRIYA-GHLADVDCVKFHPNSN--YLAT 443
Query: 169 AGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHL 228
D+ V++W+ +GH G + ++ SP+G AS G+D LWDL G
Sbjct: 444 GSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLF 503
Query: 229 HTLV-HNDIITALCFSPNRS 247
L H D IT+L FSP+ S
Sbjct: 504 KELRGHTDNITSLTFSPDSS 523
Score = 220 (82.5 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 54/169 (31%), Positives = 85/169 (50%)
Query: 14 GHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLS 73
GH V + +P + S S D T +W D Y P + GH + +
Sbjct: 382 GHAYPVWDVDISP-YSLYFASGSHDRTARLWSF---DRTY--PLRIYAGHLADVDCVKFH 435
Query: 74 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLW 133
+ NY +GS DKT+RLW G + R F H VLS+AFS + + + S+ D+ +KLW
Sbjct: 436 PNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLW 495
Query: 134 NTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTN 182
+ + F + GH+D ++ + FSP+ + +I SA D V+VW++ N
Sbjct: 496 DLASGTLFKELR-GHTDNITSLTFSPD--SSLIASASMDNSVRVWDIRN 541
Score = 187 (70.9 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 55/223 (24%), Positives = 97/223 (43%)
Query: 96 GKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCV 155
G + H V S F D+ ++S S D +I+ W+ L T++ GH+ V V
Sbjct: 332 GTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWD-LGSFTNTVLYQGHAYPVWDV 390
Query: 156 RFSPNHQNPIIVSAGWDRMVKVWNLTNC-KLKINHSGHTGYLNTVTVSPDGSLCASGGKD 214
SP + S DR ++W+ L+I ++GH ++ V P+ + A+G D
Sbjct: 391 DISP--YSLYFASGSHDRTARLWSFDRTYPLRI-YAGHLADVDCVKFHPNSNYLATGSTD 447
Query: 215 MNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGK 273
LW G + H + +L FSPN + ++ + L L+ + G
Sbjct: 448 KTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKY------LASAGEDQRLKLWDLASGT 501
Query: 274 METPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTL-AHC 315
+ ++ S+ FS D+ I S+S D ++++W+ HC
Sbjct: 502 LFKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTHC 544
Score = 55 (24.4 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 349 SLAWSTDGQTLFAGYSDNTIRVWQVSVT 376
SL +S D + + DN++RVW + T
Sbjct: 515 SLTFSPDSSLIASASMDNSVRVWDIRNT 542
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 256 (95.2 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 66/199 (33%), Positives = 99/199 (49%)
Query: 32 ILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLW 91
+LSCS D ++ W L TN + Q GH++ + D+ +S Y S S D+T RLW
Sbjct: 353 LLSCSEDMSIRYWDLG-SFTNTVLYQ----GHAYPVWDLDISPHSLYFASASHDRTARLW 407
Query: 92 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDW 151
R + H DV V F ++ + + S DKT++LW+T + GH
Sbjct: 408 SFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFT-GHRGP 466
Query: 152 VSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASG 211
V + FSPN + + SAG D+ +K+W+L + L GHT + ++T SPD SL AS
Sbjct: 467 VLSLAFSPNGK--YLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLVASA 524
Query: 212 GKDMNAMLWDLNDGKHLHT 230
D + +WD+ H T
Sbjct: 525 SMDNSVRVWDIRSS-HCST 542
Score = 248 (92.4 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 76/257 (29%), Positives = 115/257 (44%)
Query: 49 DDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKD 108
+D N G K L+GH + +D + LS S D ++R WDL + T ++ H
Sbjct: 323 EDDNLGTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYP 382
Query: 109 VLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVS 168
V + S + S+S D+T +LW+ I GH V CV+F PN + +
Sbjct: 383 VWDLDISPHSLYFASASHDRTARLWSFDRTYPLRIYA-GHLADVDCVKFHPNSN--YLAT 439
Query: 169 AGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHL 228
D+ V++W+ +GH G + ++ SP+G AS G+D LWDL G
Sbjct: 440 GSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLY 499
Query: 229 HTLV-HNDIITALCFSPNRSF-QKIKLDIS-RTLQ-KSNLILYPINHGKMETP--FFSLF 282
L H D IT+L FSP+ S +D S R +S+ P + E +
Sbjct: 500 KELRGHTDNITSLTFSPDSSLVASASMDNSVRVWDIRSSHCSTPADGSSSELVGVYTGQM 559
Query: 283 RDVLSVAFSVDNRQIVS 299
+VLSV F N +V+
Sbjct: 560 SNVLSVQFMACNLLLVT 576
Score = 194 (73.4 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 57/236 (24%), Positives = 106/236 (44%)
Query: 96 GKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCV 155
G + H V S F D+ ++S S D +I+ W+ L T++ GH+ V +
Sbjct: 328 GTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWD-LGSFTNTVLYQGHAYPVWDL 386
Query: 156 RFSPNHQNPIIVSAGWDRMVKVWNLTNC-KLKINHSGHTGYLNTVTVSPDGSLCASGGKD 214
SP+ + SA DR ++W+ L+I ++GH ++ V P+ + A+G D
Sbjct: 387 DISPH--SLYFASASHDRTARLWSFDRTYPLRI-YAGHLADVDCVKFHPNSNYLATGSTD 443
Query: 215 MNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGK 273
LW G + H + +L FSPN + ++ + L L+ + G
Sbjct: 444 KTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKY------LASAGEDQRLKLWDLASGT 497
Query: 274 METPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA-HCKFTIVDLETKKMV 328
+ ++ S+ FS D+ + S+S D ++++W+ + HC T D + ++V
Sbjct: 498 LYKELRGHTDNITSLTFSPDSSLVASASMDNSVRVWDIRSSHCS-TPADGSSSELV 552
>FB|FBgn0028496 [details] [associations]
symbol:CG30116 species:7227 "Drosophila melanogaster"
[GO:0016505 "apoptotic protease activator activity" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
UCSC:CG30116-RC FlyBase:FBgn0028496 EMBL:BT015296
ProteinModelPortal:Q6AWF2 PRIDE:Q6AWF2 InParanoid:Q6AWF2
ArrayExpress:Q6AWF2 Bgee:Q6AWF2 Uniprot:Q6AWF2
Length = 1923
Score = 262 (97.3 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 81/287 (28%), Positives = 135/287 (47%)
Query: 57 QKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 116
Q L+GH+ +S + + +G + +GS D+ + +W+LA G+ F+ HT V+ V +
Sbjct: 1247 QCTLEGHTAGVSCLKFAPNGEFLATGSEDRLVHIWNLALGEICNSFKGHTAPVVKVVVLM 1306
Query: 117 DNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVK 176
D+ +++S+ RD + +W +AH +++ + S S + VS D +K
Sbjct: 1307 DSLRVISTDRDSMLLVW--MAHSG-NLLQTIQGPYKS---LSVTNNMRFAVSTNGDNTLK 1360
Query: 177 VWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HND 235
+W+LT K + S H+ + +S D SG +DM+ +W GK LV H+D
Sbjct: 1361 IWSLTQEDEKYSVS-HSDEITCFEISADSVHIISGSRDMSLKVWQATGGKLSQVLVGHSD 1419
Query: 236 IITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNR 295
+T + S Q L S+ + NLIL+ + G+ V+ V S D
Sbjct: 1420 AVTCVAVSVTNKTQV--LSGSKDM---NLILWDLLTGEEVHTLAGHLGPVIGVKVSADGS 1474
Query: 296 QIVSSSRDKTIKLWNT---LA------HCKFTIVD--LETKKMVEEL 331
VS S DKT+ +W T LA H FT D LE +++ +L
Sbjct: 1475 TAVSGSDDKTLIVWETKRGLALTSLQMHVPFTHFDISLEVSRVLVQL 1521
Score = 177 (67.4 bits), Expect = 9.1e-10, P = 9.1e-10
Identities = 51/158 (32%), Positives = 80/158 (50%)
Query: 22 IATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALS 81
+ N +F +S + DNTL IW LT++D Y V HS I+ +S+D + +S
Sbjct: 1343 VTNNMRFA---VSTNGDNTLKIWSLTQEDEKYSV------SHSDEITCFEISADSVHIIS 1393
Query: 82 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR-QIVSSSRDKTIKLWNTLAHCK 140
GS D +L++W GK ++ H+ V VA SV N+ Q++S S+D + LW+ L +
Sbjct: 1394 GSRDMSLKVWQATGGKLSQVLVGHSDAVTCVAVSVTNKTQVLSGSKDMNLILWDLLTGEE 1453
Query: 141 FTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVW 178
+ GH V V+ S + VS D+ + VW
Sbjct: 1454 VHTLA-GHLGPVIGVKVSADGSTA--VSGSDDKTLIVW 1488
Score = 161 (61.7 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 56/241 (23%), Positives = 108/241 (44%)
Query: 14 GHNGWVTQIATNPKFP-DTILSCSRDNTLIIWKLTRDDTNYGVPQKR--LKG-HSHFISD 69
GH VT + P+ + +L+ S D T+++W + G+ ++R +K H+ I+
Sbjct: 937 GHTAAVTCLLVAPQSDSELLLTGSEDATVLVWHV-------GLRERRAHIKNAHTAPITG 989
Query: 70 IVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKT 129
+ ++ +S S D ++ + DLA+GK R H V + + ++S D+T
Sbjct: 990 VAAGANNTLIISSSEDASIAITDLASGKLRHRITHHRGPVSGIVVAGACDVLISGGLDRT 1049
Query: 130 IKLWNTLAHCKFTIVEDGHSDWVSCV-RFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKIN 188
I +W+ FT++ S V R + + +++ D + V L K
Sbjct: 1050 ICVWDL---DNFTLLNT--MQMTSAVLRIDISWNSVFLLALCEDNALYVRTLATGKELHT 1104
Query: 189 HSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHND-IITALCFSPNRS 247
GH + ++++ D C G D A+++D++ GK + +L N +TA+ N
Sbjct: 1105 LKGHKSKIRSISIGKDSQRCVVGCDDTRALIYDMHAGKLVRSLPPNPGPVTAVHAMDNDD 1164
Query: 248 F 248
F
Sbjct: 1165 F 1165
Score = 145 (56.1 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 50/196 (25%), Positives = 92/196 (46%)
Query: 115 SVDNRQI-VSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDR 173
S D++Q+ ++S R + NT + + T+ +GH+ VSC++F+PN + + + DR
Sbjct: 1222 SRDSQQMAIASGRHVHLMRINTPEY-QCTL--EGHTAGVSCLKFAPNGE--FLATGSEDR 1276
Query: 174 MVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVH 233
+V +WNL ++ + GHT + V V D S +D ++W + G L T+
Sbjct: 1277 LVHIWNLALGEICNSFKGHTAPVVKVVVLMDSLRVISTDRDSMLLVWMAHSGNLLQTI-- 1334
Query: 234 NDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVD 293
+L + N F + + TL+ +L + + + F S D
Sbjct: 1335 QGPYKSLSVTNNMRFA-VSTNGDNTLKIWSLTQEDEKYSVSHSDEITCFE------ISAD 1387
Query: 294 NRQIVSSSRDKTIKLW 309
+ I+S SRD ++K+W
Sbjct: 1388 SVHIISGSRDMSLKVW 1403
Score = 138 (53.6 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 38/160 (23%), Positives = 76/160 (47%)
Query: 91 WDLAAGKTTRRFEDHTKDV--LSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGH 148
W + + F+ HT V L VA D+ +++ S D T+ +W+ + +++ H
Sbjct: 924 WHIMSNSLDHIFKGHTAAVTCLLVAPQSDSELLLTGSEDATVLVWHVGLRERRAHIKNAH 983
Query: 149 SDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLC 208
+ ++ V N N +I+S+ D + + +L + KL+ + H G ++ + V+ +
Sbjct: 984 TAPITGVAAGAN--NTLIISSSEDASIAITDLASGKLRHRITHHRGPVSGIVVAGACDVL 1041
Query: 209 ASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCFSPNRSF 248
SGG D +WDL++ L+T+ + + S N F
Sbjct: 1042 ISGGLDRTICVWDLDNFTLLNTMQMTSAVLRIDISWNSVF 1081
Score = 124 (48.7 bits), Expect = 0.00059, P = 0.00059
Identities = 44/134 (32%), Positives = 63/134 (47%)
Query: 7 QLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHF 66
+L L GH+ VT +A + +LS S+D LI+W L G L GH
Sbjct: 1409 KLSQVLVGHSDAVTCVAVSVTNKTQVLSGSKDMNLILWDLLT-----GEEVHTLAGHLGP 1463
Query: 67 ISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH---TKDVLSVAFSVDNRQIVS 123
+ + +S+DG+ A+SGS DKTL +W+ G + H T +S+ S Q+V
Sbjct: 1464 VIGVKVSADGSTAVSGSDDKTLIVWETKRGLALTSLQMHVPFTHFDISLEVSRVLVQLVD 1523
Query: 124 SSRDKTIKLWNTLA 137
S I L NT A
Sbjct: 1524 SYNLPVICLHNTPA 1537
Score = 54 (24.1 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 353 STDGQTLFAGYSDNTIRVWQVSVTSRG 379
S DG T +G D T+ VW+ T RG
Sbjct: 1470 SADGSTAVSGSDDKTLIVWE---TKRG 1493
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 235 (87.8 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 79/280 (28%), Positives = 128/280 (45%)
Query: 51 TNYGVPQKRLKGHSHFISDIVL---SSDGN-YALSGSWDKTLRLWDLAAGKTTRR--FED 104
T Y + K+ H I + S+DG+ +SGS D +++W + + + E
Sbjct: 3 TQYSILFKQEHAHEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLELQSTLEG 62
Query: 105 HTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSD-WVSCVRFSPNHQN 163
H V+SV S + SSS D I+LW+ + + ++ G D W V FSP+ Q+
Sbjct: 63 HQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQIRAIDAGPVDAW--SVAFSPDSQH 120
Query: 164 PIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLN 223
+ + V ++ + K + + ++ ++ SPDG ASG D ++D+
Sbjct: 121 --LATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIA 178
Query: 224 DGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLF 282
GK LHTL H I +L FSP+ D + +Y + H +
Sbjct: 179 TGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD------DGYIKIYEVQHASLAATLSGHG 232
Query: 283 RDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAH-CKFTIVD 321
VL+VAFS D+ VSSS DK++K+W+ A C T +D
Sbjct: 233 SWVLNVAFSPDDTHFVSSSSDKSVKVWDVSARTCVHTFLD 272
Score = 217 (81.4 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 61/247 (24%), Positives = 115/247 (46%)
Query: 2 STETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLK 61
S E L+L+ TL GH V + +P + + S S D + +W L + +
Sbjct: 50 SDERLELQSTLEGHQLGVVSVDVSPS-GNIMASSSLDAHIRLWDLESGKQIRAIDAGPVD 108
Query: 62 GHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 121
S + S D + +GS + ++ + GK + K +LS+A+S D + +
Sbjct: 109 AWS-----VAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYL 163
Query: 122 VSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT 181
S + D I +++ +A K +GH+ + + FSP+ Q ++V+A D +K++ +
Sbjct: 164 ASGAIDGIINIFD-IATGKLLHTLEGHAMPIRSLTFSPDSQ--LLVTASDDGYIKIYEVQ 220
Query: 182 NCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITAL 240
+ L SGH ++ V SPD + S D + +WD++ +HT + H D + +
Sbjct: 221 HASLAATLSGHGSWVLNVAFSPDDTHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGV 280
Query: 241 CFSPNRS 247
++ N S
Sbjct: 281 KYNKNGS 287
Score = 201 (75.8 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 64/283 (22%), Positives = 130/283 (45%)
Query: 30 DTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLR 89
+ ++S S D+ + +WK + + Q L+GH + + +S GN S S D +R
Sbjct: 33 ELVISGSLDDLVKVWKWSDERLEL---QSTLEGHQLGVVSVDVSPSGNIMASSSLDAHIR 89
Query: 90 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCK-FTIVEDGH 148
LWDL +GK R + D SVAFS D++ + + S + ++ K +++ D
Sbjct: 90 LWDLESGKQIRAIDAGPVDAWSVAFSPDSQHLATGSHVGKVNIFGVETGKKEYSL--DTR 147
Query: 149 SDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLC 208
++ + +SP+ + + S D ++ ++++ KL GH + ++T SPD L
Sbjct: 148 GKFILSIAYSPDGK--YLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLL 205
Query: 209 ASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILY 267
+ D ++++ TL H + + FSP+ + +S + KS + ++
Sbjct: 206 VTASDDGYIKIYEVQHASLAATLSGHGSWVLNVAFSPDDTHF-----VSSSSDKS-VKVW 259
Query: 268 PINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWN 310
++ F V V ++ + +IVS + D+ I +++
Sbjct: 260 DVSARTCVHTFLDHQDQVWGVKYNKNGSKIVSVADDQEIHVYD 302
Score = 119 (46.9 bits), Expect = 0.00017, P = 0.00017
Identities = 55/264 (20%), Positives = 111/264 (42%)
Query: 121 IVSSSRDKTIKLWN-TLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
++S S D +K+W + + +GH V V SP+ I+ S+ D +++W+
Sbjct: 35 VISGSLDDLVKVWKWSDERLELQSTLEGHQLGVVSVDVSPSGN--IMASSSLDAHIRLWD 92
Query: 180 LTNCK-LKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTL-VHNDII 237
L + K ++ +G + V SPD A+G ++ + GK ++L I
Sbjct: 93 LESGKQIRAIDAGPVDAWS-VAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFI 151
Query: 238 TALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQI 297
++ +SP+ + ++ + ++ I GK+ + S+ FS D++ +
Sbjct: 152 LSIAYSPDGKY------LASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLL 205
Query: 298 VSSSRDKTIKLWNTL-AHCKFTIVDLETKKMVEELRPDVVS-QSTKADPPMCLSLAWSTD 355
V++S D IK++ A T+ + + PD S+ +D + + W
Sbjct: 206 VTASDDGYIKIYEVQHASLAATLSGHGSWVLNVAFSPDDTHFVSSSSDKSVKV---WDVS 262
Query: 356 GQTLFAGYSDNTIRVWQVSVTSRG 379
+T + D+ +VW V G
Sbjct: 263 ARTCVHTFLDHQDQVWGVKYNKNG 286
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 254 (94.5 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 64/193 (33%), Positives = 98/193 (50%)
Query: 32 ILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLW 91
+LSCS D ++ W L TN + Q GH++ + D+ +S Y SGS D+T RLW
Sbjct: 375 LLSCSEDMSIRYWDLG-SFTNTVLYQ----GHAYPVWDLDISPYSLYFASGSHDRTARLW 429
Query: 92 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDW 151
R + H DV V F ++ + + S DKT++LW+ + GH
Sbjct: 430 SFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFT-GHRGP 488
Query: 152 VSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASG 211
V + FSPN + + SAG D+ +K+W+L + L GHT + ++T SPD SL AS
Sbjct: 489 VLSLAFSPNGK--YLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASA 546
Query: 212 GKDMNAMLWDLND 224
D + +WD+ +
Sbjct: 547 SMDNSVRVWDIRN 559
Score = 245 (91.3 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 76/257 (29%), Positives = 114/257 (44%)
Query: 49 DDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKD 108
+D N G K L+GH + +D + LS S D ++R WDL + T ++ H
Sbjct: 345 EDDNAGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYP 404
Query: 109 VLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVS 168
V + S + S S D+T +LW+ I GH V CV+F PN + +
Sbjct: 405 VWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYA-GHLADVDCVKFHPNSN--YLAT 461
Query: 169 AGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHL 228
D+ V++W+ +GH G + ++ SP+G AS G+D LWDL G
Sbjct: 462 GSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLY 521
Query: 229 HTLV-HNDIITALCFSPNRSF-QKIKLDIS-RTLQKSNLILY-PIN--HGKMETPFFSLF 282
L H D IT+L FSP+ S +D S R N P + G++ +
Sbjct: 522 KELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTYCSTPADGSSGELVGVYTGQM 581
Query: 283 RDVLSVAFSVDNRQIVS 299
+VLSV F N +V+
Sbjct: 582 SNVLSVQFMACNLLLVT 598
Score = 221 (82.9 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 52/163 (31%), Positives = 82/163 (50%)
Query: 34 SCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDL 93
S S D T +W D Y P + GH + + + NY +GS DKT+RLW
Sbjct: 419 SGSHDRTARLWSF---DRTY--PLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSA 473
Query: 94 AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVS 153
G + R F H VLS+AFS + + + S+ D+ +KLW+ + + + GH+D ++
Sbjct: 474 QQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELR-GHTDNIT 532
Query: 154 CVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYL 196
+ FSP+ + +I SA D V+VW++ N G +G L
Sbjct: 533 SLTFSPD--SSLIASASMDNSVRVWDIRNTYCSTPADGSSGEL 573
Score = 184 (69.8 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 53/218 (24%), Positives = 96/218 (44%)
Query: 95 AGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSC 154
AG + H V S F D+ ++S S D +I+ W+ L T++ GH+ V
Sbjct: 349 AGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWD-LGSFTNTVLYQGHAYPVWD 407
Query: 155 VRFSPNHQNPIIVSAGWDRMVKVWNLTNC-KLKINHSGHTGYLNTVTVSPDGSLCASGGK 213
+ SP + S DR ++W+ L+I ++GH ++ V P+ + A+G
Sbjct: 408 LDISP--YSLYFASGSHDRTARLWSFDRTYPLRI-YAGHLADVDCVKFHPNSNYLATGST 464
Query: 214 DMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHG 272
D LW G + H + +L FSPN + ++ + L L+ + G
Sbjct: 465 DKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKY------LASAGEDQRLKLWDLASG 518
Query: 273 KMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWN 310
+ ++ S+ FS D+ I S+S D ++++W+
Sbjct: 519 TLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWD 556
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 237 (88.5 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 61/204 (29%), Positives = 102/204 (50%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
+L GH +T++ +P F ++S S D T+ IW D G ++ LKGH+ + D+
Sbjct: 103 SLTGHRASITRVIFHPIFA-LMVSASEDATIRIW-----DFETGEYERSLKGHTDSVQDV 156
Query: 71 VLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKT 129
+ G S S D +++LWD + + H +V SVAF ++S+SRD+T
Sbjct: 157 AFDAQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRT 216
Query: 130 IKLWNTLA-HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTN---CKL 185
IK+W +C T GH +WV VR + + I + D+ ++VW LTN CK+
Sbjct: 217 IKMWEVATGYCVKTYT--GHREWVRMVRV--HIEGSIFATCSNDQTIRVW-LTNSKDCKV 271
Query: 186 KINHSGHTGYLNTVTVSPDGSLCA 209
++ HT + + +P+ + A
Sbjct: 272 ELRDHEHT--VECIAWAPEAAASA 293
Score = 224 (83.9 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 80/334 (23%), Positives = 137/334 (41%)
Query: 56 PQK-RLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 114
P+K L GH I+ ++ +S S D T+R+WD G+ R + HT V VAF
Sbjct: 99 PEKFSLTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAF 158
Query: 115 SVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRM 174
+ + S S D +IKLW+ + GH VS V F P ++SA DR
Sbjct: 159 DAQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVP--AGDYVLSASRDRT 216
Query: 175 VKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-- 232
+K+W + ++GH ++ V V +GS+ A+ D +W L + K +
Sbjct: 217 IKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVW-LTNSKDCKVELRD 275
Query: 233 HNDIITALCFSPNRSFQKIKLDISRTLQKSN--------------LILYPINHGKMETPF 278
H + + ++P + I +K + + ++ ++ G
Sbjct: 276 HEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTL 335
Query: 279 FSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQ 338
V +AF + +VS+S DKTI++W DL K+ ++ L
Sbjct: 336 SGHDNWVRGLAFHPGGKYLVSASDDKTIRVW-----------DLRNKRCMKTLY------ 378
Query: 339 STKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQ 372
A C S+ + + +G D T++VW+
Sbjct: 379 ---AHQHFCTSIDFHKAHPYVISGSVDQTVKVWE 409
Score = 157 (60.3 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 60/245 (24%), Positives = 106/245 (43%)
Query: 140 KFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTV 199
KF++ GH ++ V F P ++VSA D +++W+ + + + GHT + V
Sbjct: 101 KFSLT--GHRASITRVIFHPIFA--LMVSASEDATIRIWDFETGEYERSLKGHTDSVQDV 156
Query: 200 TVSPDGSLCASGGKDMNAMLWDLNDG----KHLHTLVHNDIITALCFSPNRSFQKIKLDI 255
G L AS D++ LWD K +H HN ++++ F P + +
Sbjct: 157 AFDAQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHN--VSSVAFVPAGDYV-LSASR 213
Query: 256 SRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAH- 314
RT++ ++ + G + V V ++ + S D+TI++W T +
Sbjct: 214 DRTIK-----MWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKD 268
Query: 315 CKFTIVDLE-TKKMVE---ELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRV 370
CK + D E T + + E ++++ AD + G L +G D TIR+
Sbjct: 269 CKVELRDHEHTVECIAWAPEAAASAINEAAGAD-----NKKGHHQGPFLASGSRDKTIRI 323
Query: 371 WQVSV 375
W VSV
Sbjct: 324 WDVSV 328
Score = 146 (56.5 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 32/102 (31%), Positives = 52/102 (50%)
Query: 32 ILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLW 91
+ S SRD T+ IW D + G+ L GH +++ + G Y +S S DKT+R+W
Sbjct: 312 LASGSRDKTIRIW-----DVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVW 366
Query: 92 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLW 133
DL + + H S+ F + ++S S D+T+K+W
Sbjct: 367 DLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVW 408
Score = 118 (46.6 bits), Expect = 0.00038, P = 0.00038
Identities = 27/82 (32%), Positives = 42/82 (51%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
TL+GH+ WV +A +P ++S S D T+ +W L K L H HF + I
Sbjct: 334 TLSGHDNWVRGLAFHPG-GKYLVSASDDKTIRVWDLRNKRC-----MKTLYAHQHFCTSI 387
Query: 71 VLSSDGNYALSGSWDKTLRLWD 92
Y +SGS D+T+++W+
Sbjct: 388 DFHKAHPYVISGSVDQTVKVWE 409
Score = 49 (22.3 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 350 LAWSTDGQTLFAGYSDNTIRVWQV 373
LA+ G+ L + D TIRVW +
Sbjct: 345 LAFHPGGKYLVSASDDKTIRVWDL 368
>UNIPROTKB|C9JLV4 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9606 "Homo sapiens" [GO:0006952 "defense response"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005794 GO:GO:0006952
GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
InterPro:IPR011047 SUPFAM:SSF50998 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 EMBL:AC011248
HOGENOM:HOG000290173 HGNC:HGNC:576 EMBL:AC013283 IPI:IPI00953387
SMR:C9JLV4 STRING:C9JLV4 Ensembl:ENST00000339433
Ensembl:ENST00000549007 Uniprot:C9JLV4
Length = 1163
Score = 258 (95.9 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
Identities = 78/296 (26%), Positives = 130/296 (43%)
Query: 38 DNTLII--WKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAA 95
DN ++ W ++ TN + + ++ H+ + S DG S DKTL+++
Sbjct: 589 DNGMLYLEWINKKNITN--LSRLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAET 646
Query: 96 GKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCV 155
G+ + H +VL AFS D+R I + S DK +K+WN++ + D HS+ V+C
Sbjct: 647 GEKLLEIKAHEDEVLCCAFSTDDRFIATCSVDKKVKIWNSMTG-ELVHTYDEHSEQVNCC 705
Query: 156 RFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDM 215
F+ + + ++ + D +K+W+L + + GHT +N SPD L AS D
Sbjct: 706 HFTNSSHHLLLATGSSDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADG 765
Query: 216 NAMLWDLNDGKHLHTLVHNDIITALCFSPNRSFQKI------KLDISRTL--QKSNLILY 267
LWD ++ L P + I D +R + K+ + L+
Sbjct: 766 TLKLWDATSANERKSINVKQFFLNL-EDPQEDMEVIVKCCSWSADGARIMVAAKNKIFLW 824
Query: 268 PINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLE 323
+ V V FS D ++SS D+TI+LW T CK + V L+
Sbjct: 825 NTDSRSKVADCRGHLSWVHGVMFSPDGSSFLTSSDDQTIRLWETKKVCKNSAVMLK 880
Score = 187 (70.9 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 59/195 (30%), Positives = 93/195 (47%)
Query: 18 WVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGN 77
W Q + K T++S S D + +W D + L+GH + D L +
Sbjct: 964 WHIQFTADEK---TLISSSDDAEIQVWNWQLDKCIF------LRGHQETVKDFRLLKNSR 1014
Query: 78 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNT-- 135
LS S+D T+++W++ G + F H VLS S D + S+S DKT K+WN
Sbjct: 1015 L-LSWSFDGTVKVWNIITGNKEKDFVCHQGTVLSCDISHDATKFSSTSADKTAKIWNVSN 1073
Query: 136 --LAHCKFTIVEDG---HSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL-TNCKLKINH 189
L H + E+G H WV+ + FSP+ + +++SAG +K WN+ T + +
Sbjct: 1074 GELLHLCAPLSEEGAATHGGWVTDLCFSPDGK--MLISAGG--YIKWWNVVTGESSQTFY 1129
Query: 190 SGHTGYLNTVTVSPD 204
+ T L + VSPD
Sbjct: 1130 TNGTN-LKKIHVSPD 1143
Score = 177 (67.4 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 53/190 (27%), Positives = 89/190 (46%)
Query: 67 ISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSSS 125
+S LS Y G + + + +L + + RF+ H K V + F+ D + ++SSS
Sbjct: 921 VSCCCLSPHLQYIAFGDENGAIEILELVNNRIFQSRFQ-HKKTVWHIQFTADEKTLISSS 979
Query: 126 RDKTIKLWN-TLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCK 184
D I++WN L C F GH + V R N + ++S +D VKVWN+
Sbjct: 980 DDAEIQVWNWQLDKCIFL---RGHQETVKDFRLLKNSR---LLSWSFDGTVKVWNIITGN 1033
Query: 185 LKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLH---------TLVHND 235
+ + H G + + +S D + +S D A +W++++G+ LH H
Sbjct: 1034 KEKDFVCHQGTVLSCDISHDATKFSSTSADKTAKIWNVSNGELLHLCAPLSEEGAATHGG 1093
Query: 236 IITALCFSPN 245
+T LCFSP+
Sbjct: 1094 WVTDLCFSPD 1103
Score = 151 (58.2 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 40/154 (25%), Positives = 78/154 (50%)
Query: 32 ILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLW 91
I SC D TL ++K +T G +K H + S+D + + S DK +++W
Sbjct: 630 IASCGADKTLQVFKA---ET--GEKLLEIKAHEDEVLCCAFSTDDRFIATCSVDKKVKIW 684
Query: 92 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV--SSSRDKTIKLWN-TLAHCKFTIVEDGH 148
+ G+ +++H++ V F+ + ++ + S D +KLW+ C+ T+ GH
Sbjct: 685 NSMTGELVHTYDEHSEQVNCCHFTNSSHHLLLATGSSDCFLKLWDLNQKECRNTMF--GH 742
Query: 149 SDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTN 182
++ V+ RFSP+ + ++ S D +K+W+ T+
Sbjct: 743 TNSVNHCRFSPDDK--LLASCSADGTLKLWDATS 774
Score = 133 (51.9 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 80/318 (25%), Positives = 131/318 (41%)
Query: 7 QLRGTLNGHNGWVTQIATNPKFPDTIL-SCSRDNTLIIWKLTRDDTNYGVPQKR----LK 61
+ R T+ GH V +P D +L SCS D TL +W T + + K+ L+
Sbjct: 734 ECRNTMFGHTNSVNHCRFSPD--DKLLASCSADGTLKLWDATSANERKSINVKQFFLNLE 791
Query: 62 GHSHFISDIVL----SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 117
+ IV S+DG + + +K LW+ + H V V FS D
Sbjct: 792 DPQEDMEVIVKCCSWSADGARIMVAAKNKIF-LWNTDSRSKVADCRGHLSWVHGVMFSPD 850
Query: 118 NRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKV 177
++SS D+TI+LW T CK + V V V F +N ++V A V
Sbjct: 851 GSSFLTSSDDQTIRLWETKKVCKNSAVMLKQE--VDVV-FQ---ENEVMVLA-------V 897
Query: 178 WNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDII 237
++ +L IN G TG ++ +T + C S A D N + LV+N I
Sbjct: 898 DHIRRLQL-IN--GRTGQIDYLTEAQVSCCCLSPHLQYIAF-GDENGAIEILELVNNRIF 953
Query: 238 TALCFSPNRSFQKIKL--DISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSV-DN 294
+ F ++ I+ D + S+ + + +++ F F + N
Sbjct: 954 QSR-FQHKKTVWHIQFTADEKTLISSSDDAEIQVWNWQLDKCIFLRGHQETVKDFRLLKN 1012
Query: 295 RQIVSSSRDKTIKLWNTL 312
+++S S D T+K+WN +
Sbjct: 1013 SRLLSWSFDGTVKVWNII 1030
Score = 132 (51.5 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 55/250 (22%), Positives = 102/250 (40%)
Query: 61 KGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ 120
+GH ++ ++ S DG+ L+ S D+T+RLW+ K + K + V F +
Sbjct: 836 RGHLSWVHGVMFSPDGSSFLTSSDDQTIRLWETK--KVCKNSAVMLKQEVDVVFQENEVM 893
Query: 121 IVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL 180
+++ + ++L N + + + VSC SP+ Q I + +++ L
Sbjct: 894 VLAVDHIRRLQLINGRTG-QIDYLTEAQ---VSCCCLSPHLQ--YIAFGDENGAIEILEL 947
Query: 181 TNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITAL 240
N ++ + H + + + D S D +W+ K + H + T
Sbjct: 948 VNNRIFQSRFQHKKTVWHIQFTADEKTLISSSDDAEIQVWNWQLDKCIFLRGHQE--TVK 1005
Query: 241 CFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSS 300
F ++ + + T++ N+I G E F VLS S D + S+
Sbjct: 1006 DFRLLKNSRLLSWSFDGTVKVWNIIT-----GNKEKDFVCHQGTVLSCDISHDATKFSST 1060
Query: 301 SRDKTIKLWN 310
S DKT K+WN
Sbjct: 1061 SADKTAKIWN 1070
Score = 49 (22.3 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 352 WSTDGQTLFAGYSDNTIRVWQ 372
+S DG + D TIR+W+
Sbjct: 847 FSPDGSSFLTSSDDQTIRLWE 867
Score = 39 (18.8 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 350 LAWSTDGQTLFAGYSDNTIRVW 371
+ ++ D +TL + D I+VW
Sbjct: 966 IQFTADEKTLISSSDDAEIQVW 987
Score = 38 (18.4 bits), Expect = 5.1e-19, Sum P(2) = 5.1e-19
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 348 LSLAWSTDGQTLFAGYSDNTIRVWQVS 374
LS S D + +D T ++W VS
Sbjct: 1046 LSCDISHDATKFSSTSADKTAKIWNVS 1072
>UNIPROTKB|G4MRA1 [details] [associations]
symbol:MGG_04693 "WD repeat-containing protein 57"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
KO:K12857 RefSeq:XP_003710838.1 ProteinModelPortal:G4MRA1
EnsemblFungi:MGG_04693T0 GeneID:2678191 KEGG:mgr:MGG_04693
Uniprot:G4MRA1
Length = 352
Score = 232 (86.7 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
Identities = 67/213 (31%), Positives = 98/213 (46%)
Query: 12 LNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV 71
L+GH+G + N I S S D ++++W+ D NYG+ L GH I D+
Sbjct: 56 LSGHSGEIFCAKFNSA-GQYIASGSMDRSILLWRANGDCENYGI----LSGHRGAILDLQ 110
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SSSRDKTI 130
S D + S S D L WDL G+ RR+ H + + S+ S +I+ S S D TI
Sbjct: 111 WSRDSDIIFSASADMHLASWDLTTGERIRRYVGHEEVINSLDISKRGEEILFSGSDDGTI 170
Query: 131 KLWNTLAHCKFTIVEDGHSDW-VSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINH 189
+W+ +E SD+ V+ V S I S G D +KVW++ + N
Sbjct: 171 GIWDPRKKHAADYIE---SDFPVTAVAISEAGNE--IYSGGIDNDIKVWDVRKKAVVYNM 225
Query: 190 SGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
+GH + T+ VSPD S D A WD+
Sbjct: 226 AGHRDTITTLKVSPDSQSLLSYAMDSTARTWDI 258
Score = 177 (67.4 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 68/247 (27%), Positives = 105/247 (42%)
Query: 10 GTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISD 69
G L+GH G + + + + D I S S D L W LT G +R GH I+
Sbjct: 97 GILSGHRGAILDLQWS-RDSDIIFSASADMHLASWDLTT-----GERIRRYVGHEEVINS 150
Query: 70 IVLSSDGNYAL-SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDK 128
+ +S G L SGS D T+ +WD K + + V +VA S +I S D
Sbjct: 151 LDISKRGEEILFSGSDDGTIGIWD-PRKKHAADYIESDFPVTAVAISEAGNEIYSGGIDN 209
Query: 129 TIKLWNTLAHCKFTIVED--GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL-----T 181
IK+W+ K +V + GH D ++ ++ SP+ Q+ ++S D + W++ T
Sbjct: 210 DIKVWDVR---KKAVVYNMAGHRDTITTLKVSPDSQS--LLSYAMDSTARTWDIRPFAPT 264
Query: 182 NCKLKINHSGHTGY-LNTVTVSPD--GSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDII 237
++ G N V D G A G D ++W GK + L H +
Sbjct: 265 ERHIRTFDGAPMGIEKNLVRGGWDKEGKRVAMGAADGTVVIWSNETGKLTYKLPGHKAAV 324
Query: 238 TALCFSP 244
+ FSP
Sbjct: 325 NCVEFSP 331
Score = 147 (56.8 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 57/260 (21%), Positives = 109/260 (41%)
Query: 56 PQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR--FEDHTKDVLSVA 113
P L GHS I +S G Y SGS D+++ LW A G H +L +
Sbjct: 52 PLMELSGHSGEIFCAKFNSAGQYIASGSMDRSILLWR-ANGDCENYGILSGHRGAILDLQ 110
Query: 114 FSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDR 173
+S D+ I S+S D + W+ + GH + ++ + S + I+ S D
Sbjct: 111 WSRDSDIIFSASADMHLASWDLTTGERIRRYV-GHEEVINSLDISKRGEE-ILFSGSDDG 168
Query: 174 MVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV- 232
+ +W+ K ++ + V +S G+ SGG D + +WD+ ++ +
Sbjct: 169 TIGIWDPRK-KHAADYIESDFPVTAVAISEAGNEIYSGGIDNDIKVWDVRKKAVVYNMAG 227
Query: 233 HNDIITALCFSPN-RSFQKIKLD-ISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAF 290
H D IT L SP+ +S +D +RT + + + ++++ +
Sbjct: 228 HRDTITTLKVSPDSQSLLSYAMDSTARTWDIRPFAPTERHIRTFDGAPMGIEKNLVRGGW 287
Query: 291 SVDNRQIVSSSRDKTIKLWN 310
+ +++ + D T+ +W+
Sbjct: 288 DKEGKRVAMGAADGTVVIWS 307
Score = 135 (52.6 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 44/170 (25%), Positives = 77/170 (45%)
Query: 19 VTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNY 78
VT +A + + + I S DN + +W + + Y + GH I+ + +S D
Sbjct: 190 VTAVAIS-EAGNEIYSGGIDNDIKVWDVRKKAVVYN-----MAGHRDTITTLKVSPDSQS 243
Query: 79 ALSGSWDKTLRLWDLAAGKTTRR----FEDHT----KDVLSVAFSVDNRQIVSSSRDKTI 130
LS + D T R WD+ T R F+ K+++ + + +++ + D T+
Sbjct: 244 LLSYAMDSTARTWDIRPFAPTERHIRTFDGAPMGIEKNLVRGGWDKEGKRVAMGAADGTV 303
Query: 131 KLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL 180
+W+ K T GH V+CV FSP + P+I+S D+ + V L
Sbjct: 304 VIWSNETG-KLTYKLPGHKAAVNCVEFSPGTE-PLILSGSSDKTLLVGEL 351
Score = 46 (21.3 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
Identities = 6/20 (30%), Positives = 12/20 (60%)
Query: 352 WSTDGQTLFAGYSDNTIRVW 371
W +G+ + G +D T+ +W
Sbjct: 287 WDKEGKRVAMGAADGTVVIW 306
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 250 (93.1 bits), Expect = 7.3e-19, P = 7.3e-19
Identities = 63/193 (32%), Positives = 97/193 (50%)
Query: 32 ILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLW 91
+LSCS D ++ W L TN + Q GH++ + D+ +S Y SGS D+T RLW
Sbjct: 357 LLSCSEDMSIRYWDLG-SFTNTVLYQ----GHAYPVWDLDISPYSLYFASGSHDRTARLW 411
Query: 92 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDW 151
R + H DV V F ++ + + S DKT++LW+ + GH
Sbjct: 412 SFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFT-GHRGP 470
Query: 152 VSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASG 211
V + FSPN + + SAG D+ +K+W+L + L GHT + ++T SPD L AS
Sbjct: 471 VLSLAFSPNGK--YLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIASA 528
Query: 212 GKDMNAMLWDLND 224
D + +WD+ +
Sbjct: 529 SMDNSVRVWDIRN 541
Score = 239 (89.2 bits), Expect = 5.0e-19, Sum P(2) = 5.0e-19
Identities = 62/198 (31%), Positives = 92/198 (46%)
Query: 49 DDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKD 108
+D N G K L+GH + +D + LS S D ++R WDL + T ++ H
Sbjct: 327 EDDNAGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYP 386
Query: 109 VLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVS 168
V + S + S S D+T +LW+ I GH V CV+F PN + +
Sbjct: 387 VWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYA-GHLADVDCVKFHPNSN--YLAT 443
Query: 169 AGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHL 228
D+ V++W+ +GH G + ++ SP+G AS G+D LWDL G
Sbjct: 444 GSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLY 503
Query: 229 HTLV-HNDIITALCFSPN 245
L H D IT+L FSP+
Sbjct: 504 KELRGHTDNITSLTFSPD 521
Score = 183 (69.5 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 53/218 (24%), Positives = 96/218 (44%)
Query: 95 AGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSC 154
AG + H V S F D+ ++S S D +I+ W+ L T++ GH+ V
Sbjct: 331 AGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWD-LGSFTNTVLYQGHAYPVWD 389
Query: 155 VRFSPNHQNPIIVSAGWDRMVKVWNLTNC-KLKINHSGHTGYLNTVTVSPDGSLCASGGK 213
+ SP + S DR ++W+ L+I ++GH ++ V P+ + A+G
Sbjct: 390 LDISP--YSLYFASGSHDRTARLWSFDRTYPLRI-YAGHLADVDCVKFHPNSNYLATGST 446
Query: 214 DMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHG 272
D LW G + H + +L FSPN + ++ + L L+ + G
Sbjct: 447 DKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKY------LASAGEDQRLKLWDLASG 500
Query: 273 KMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWN 310
+ ++ S+ FS D+ I S+S D ++++W+
Sbjct: 501 TLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWD 538
Score = 53 (23.7 bits), Expect = 5.0e-19, Sum P(2) = 5.0e-19
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 349 SLAWSTDGQTLFAGYSDNTIRVWQVSVT 376
SL +S D + + DN++RVW + T
Sbjct: 515 SLTFSPDSGLIASASMDNSVRVWDIRNT 542
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 247 (92.0 bits), Expect = 5.4e-19, Sum P(2) = 5.4e-19
Identities = 67/199 (33%), Positives = 97/199 (48%)
Query: 62 GHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKT--TRRFEDHTKDVLSVAFSVDNR 119
GH I + + +G Y SGS DKT+RLWD+A GK T ED V +VA S D
Sbjct: 356 GHEQDIYSLDFAGNGRYIASGSGDKTVRLWDIAEGKLVYTLSIED---GVTTVAMSPDGL 412
Query: 120 QIVSSSRDKTIKLWNTLAHCKFTIVE--DGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKV 177
+ + S DKT+++W+T +E DGH D V V F+PN + +VS D+ +K+
Sbjct: 413 YVAAGSLDKTVRVWDTTTGYLVERLENPDGHKDSVYSVAFAPNGKE--LVSGSLDKTIKL 470
Query: 178 WNLTNCKLKIN--------H---SGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGK 226
W L + + N H GH ++ +V ++PDG SG KD WD G
Sbjct: 471 WELNLPRQQYNSAGKGGKCHRTFEGHKDFVLSVCLTPDGHWVMSGSKDRGVQFWDPITGN 530
Query: 227 HLHTLV-HNDIITALCFSP 244
L H + + ++ SP
Sbjct: 531 AQMMLQGHKNSVISVAPSP 549
Score = 242 (90.2 bits), Expect = 6.3e-18, P = 6.3e-18
Identities = 78/268 (29%), Positives = 126/268 (47%)
Query: 66 FISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSS 125
+I + S DG Y +G+ DK +R+WD+A F H +D+ S+ F+ + R I S S
Sbjct: 318 YIRSVCFSPDGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASGS 377
Query: 126 RDKTIKLWNTLAHCK--FTI-VEDGHSDWVSCVRFSPNHQNPIIVSAG-WDRMVKVWNLT 181
DKT++LW+ +A K +T+ +EDG V+ V SP+ + V+AG D+ V+VW+ T
Sbjct: 378 GDKTVRLWD-IAEGKLVYTLSIEDG----VTTVAMSPDG---LYVAAGSLDKTVRVWDTT 429
Query: 182 NCKL--KI-NHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLN-----------DGKH 227
L ++ N GH + +V +P+G SG D LW+LN GK
Sbjct: 430 TGYLVERLENPDGHKDSVYSVAFAPNGKELVSGSLDKTIKLWELNLPRQQYNSAGKGGKC 489
Query: 228 LHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVL 286
T H D + ++C +P+ + +S + + PI G + V+
Sbjct: 490 HRTFEGHKDFVLSVCLTPDGHWV-----MSGSKDRGVQFWDPIT-GNAQMMLQGHKNSVI 543
Query: 287 SVAFSVDNRQIVSSSRDKTIKLWNTLAH 314
SVA S + S D ++W A+
Sbjct: 544 SVAPSPTGNLFATGSGDMRARIWRYSAY 571
Score = 196 (74.1 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 63/274 (22%), Positives = 129/274 (47%)
Query: 105 HTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSD-----WVSCVRFSP 159
H V V FS D + + + +++ ++++ +++D D ++ V FSP
Sbjct: 268 HDSVVCCVRFSRDGKYLATGC-NRSAQIFDVTLGQNVAVLQDESVDKSGDLYIRSVCFSP 326
Query: 160 NHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAML 219
+ + + + D+ ++VW++ +K SGH + ++ + +G ASG D L
Sbjct: 327 DGK--YLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSGDKTVRL 384
Query: 220 WDLNDGKHLHTLVHNDIITALCFSPNRSFQKIKLDISRTLQKSNLIL-YPINHGKMETPF 278
WD+ +GK ++TL D +T + SP+ + + +T++ + Y + ++E P
Sbjct: 385 WDIAEGKLVYTLSIEDGVTTVAMSPDGLYVAAG-SLDKTVRVWDTTTGYLVE--RLENP- 440
Query: 279 FSLFRD-VLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVS 337
+D V SVAF+ + +++VS S DKTIKLW ++L ++ +
Sbjct: 441 -DGHKDSVYSVAFAPNGKELVSGSLDKTIKLWE---------LNLPRQQYNSAGKGGKCH 490
Query: 338 QSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVW 371
++ + LS+ + DG + +G D ++ W
Sbjct: 491 RTFEGHKDFVLSVCLTPDGHWVMSGSKDRGVQFW 524
Score = 153 (58.9 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 36/132 (27%), Positives = 61/132 (46%)
Query: 13 NGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNY------GVPQKRLKGHSHF 66
+GH V +A P + ++S S D T+ +W+L Y G + +GH F
Sbjct: 441 DGHKDSVYSVAFAPNGKE-LVSGSLDKTIKLWELNLPRQQYNSAGKGGKCHRTFEGHKDF 499
Query: 67 ISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSR 126
+ + L+ DG++ +SGS D+ ++ WD G + H V+SVA S + S
Sbjct: 500 VLSVCLTPDGHWVMSGSKDRGVQFWDPITGNAQMMLQGHKNSVISVAPSPTGNLFATGSG 559
Query: 127 DKTIKLWNTLAH 138
D ++W A+
Sbjct: 560 DMRARIWRYSAY 571
Score = 42 (19.8 bits), Expect = 5.4e-19, Sum P(2) = 5.4e-19
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 348 LSLAWSTDGQTLFAGYSDNTIRVWQVSV-TSR 378
+S+A S G G D R+W+ S T R
Sbjct: 543 ISVAPSPTGNLFATGSGDMRARIWRYSAYTGR 574
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 247 (92.0 bits), Expect = 5.8e-19, Sum P(2) = 5.8e-19
Identities = 58/164 (35%), Positives = 83/164 (50%)
Query: 60 LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 119
L GH+ + + L++ ++GS ++R+WDL A K R H ++ S+ F
Sbjct: 59 LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE 118
Query: 120 QIVSSSRDKTIKLWNTLAH-CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVW 178
+ S S+D IKLW+ C F GHS V C+RFSP+ + + SA D VK+W
Sbjct: 119 FVASGSQDTNIKLWDIRRKGCVFRY--RGHSQAVRCLRFSPDGK--WLASAADDHTVKLW 174
Query: 179 NLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
+LT K+ GHTG +N V P+ L ASG D WDL
Sbjct: 175 DLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
Score = 180 (68.4 bits), Expect = 8.4e-11, Sum P(2) = 8.4e-11
Identities = 48/190 (25%), Positives = 79/190 (41%)
Query: 58 KRLKGHSHFISDIVLS-SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 116
+ + H+ +S +VL + G +G D + LW + HT V SV +
Sbjct: 14 QEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNT 73
Query: 117 DNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVK 176
IV+ S+ +I++W+ L K GH + + F P + + S D +K
Sbjct: 74 PEELIVAGSQSGSIRVWD-LEAAKILRTLMGHKANICSLDFHPYGE--FVASGSQDTNIK 130
Query: 177 VWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HND 235
+W++ + GH+ + + SPDG AS D LWDL GK + H
Sbjct: 131 LWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTG 190
Query: 236 IITALCFSPN 245
+ + F PN
Sbjct: 191 PVNVVEFHPN 200
Score = 178 (67.7 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 73/299 (24%), Positives = 125/299 (41%)
Query: 4 ETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGH 63
E ++ TL GH + + +P + + + S S+D + +W + R + R +GH
Sbjct: 93 EAAKILRTLMGHKANICSLDFHP-YGEFVASGSQDTNIKLWDIRRKGCVF-----RYRGH 146
Query: 64 SHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 123
S + + S DG + S + D T++LWDL AGK F HT V V F + + S
Sbjct: 147 SQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLAS 206
Query: 124 SSRDKTIKLWNTLAHCKFTIVE--DGH-------SDWVSCVRFSPNHQNPIIVSAGWDRM 174
S D+TI+ W+ KF +V +G WV V SP P +V +
Sbjct: 207 GSSDRTIRFWDLE---KFQVVSCIEGEPGPVRYAGSWV--VGLSPP---PKVVGCRYGAG 258
Query: 175 VKVWNLTNCKLK----------INHSGHTGYLNTVTVSPDGSLCASGGKD-MNAMLWD-- 221
V + +C L + + H+ +V +PDG SG +D + W+
Sbjct: 259 VSRSHHRSCSLFPGLPTAFPDFLRPTPHSRLPRSVLFNPDGCCLYSGCQDSLRVYGWEPE 318
Query: 222 -------LNDGKHLHTLVHNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGK 273
++ GK V ND + + FS + + +D++R + + P+ +
Sbjct: 319 RCFDVVLVSWGKVADLAVCNDQLIGVAFSQSNVSSYV-VDLTRVTRTGTVAQDPVQDSR 376
Score = 170 (64.9 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 54/209 (25%), Positives = 89/209 (42%)
Query: 105 HTKDVLSVAFS-VDNRQIVSSSRDKTIKLWN-TLAHCKFTIVEDGHSDWVSCVRFSPNHQ 162
H +V S+ R + + D + LW+ +C ++ GH+ V VR N
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT--GHTSPVESVRL--NTP 74
Query: 163 NPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
+IV+ ++VW+L K+ GH + ++ P G ASG +D N LWD+
Sbjct: 75 EELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDI 134
Query: 223 N-DGKHLHTLVHNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSL 281
G H+ + L FSP+ + D T++ L+ + GKM + F
Sbjct: 135 RRKGCVFRYRGHSQAVRCLRFSPDGKWLASAAD-DHTVK-----LWDLTAGKMMSEFPGH 188
Query: 282 FRDVLSVAFSVDNRQIVSSSRDKTIKLWN 310
V V F + + S S D+TI+ W+
Sbjct: 189 TGPVNVVEFHPNEYLLASGSSDRTIRFWD 217
Score = 137 (53.3 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 40/152 (26%), Positives = 73/152 (48%)
Query: 165 IIVSAGWDRMVKVWNLT--NCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
++ + G D V +W++ NC + + +GHT + +V ++ L +G + + +WDL
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSL--TGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL 92
Query: 223 NDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSL 281
K L TL+ H I +L F P F ++ Q +N+ L+ I +
Sbjct: 93 EAAKILRTLMGHKANICSLDFHPYGEF------VASGSQDTNIKLWDIRRKGCVFRYRGH 146
Query: 282 FRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA 313
+ V + FS D + + S++ D T+KLW+ A
Sbjct: 147 SQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 178
Score = 42 (19.8 bits), Expect = 5.8e-19, Sum P(2) = 5.8e-19
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 359 LFAGYSDNTIRVWQV 373
L +G SD TIR W +
Sbjct: 204 LASGSSDRTIRFWDL 218
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 229 (85.7 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 55/156 (35%), Positives = 80/156 (51%)
Query: 60 LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 119
L GH+ + + L++ ++GS ++R+WDL A K R H ++ S+ F
Sbjct: 59 LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE 118
Query: 120 QIVSSSRDKTIKLWNTLAH-CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVW 178
+ S S+D IKLW+ C F GHS V C+RFSP+ + + SA D VK+W
Sbjct: 119 FVASGSQDTNIKLWDIRRKGCVFRY--RGHSQAVRCLRFSPDGK--WLASAADDHTVKLW 174
Query: 179 NLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKD 214
+LT K+ GHTG +N V P+ L ASG D
Sbjct: 175 DLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSD 210
Score = 180 (68.4 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 48/190 (25%), Positives = 79/190 (41%)
Query: 58 KRLKGHSHFISDIVLS-SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 116
+ + H+ +S +VL + G +G D + LW + HT V SV +
Sbjct: 14 QEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNT 73
Query: 117 DNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVK 176
IV+ S+ +I++W+ L K GH + + F P + + S D +K
Sbjct: 74 PEELIVAGSQSGSIRVWD-LEAAKILRTLMGHKANICSLDFHPYGE--FVASGSQDTNIK 130
Query: 177 VWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HND 235
+W++ + GH+ + + SPDG AS D LWDL GK + H
Sbjct: 131 LWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTG 190
Query: 236 IITALCFSPN 245
+ + F PN
Sbjct: 191 PVNVVEFHPN 200
Score = 160 (61.4 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 42/150 (28%), Positives = 69/150 (46%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
+L GH V + N + I++ S+ ++ +W D + L GH I +
Sbjct: 58 SLTGHTSPVESVRLNTP-EELIVAGSQSGSIRVW-----DLEAAKILRTLMGHKANICSL 111
Query: 71 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 130
G + SGS D ++LWD+ R+ H++ V + FS D + + S++ D T+
Sbjct: 112 DFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTV 171
Query: 131 KLWNTLAHCKFTIVEDGHSDWVSCVRFSPN 160
KLW+ A K GH+ V+ V F PN
Sbjct: 172 KLWDLTAG-KMMSEFPGHTGPVNVVEFHPN 200
Score = 148 (57.2 bits), Expect = 7.4e-09, P = 7.4e-09
Identities = 37/124 (29%), Positives = 59/124 (47%)
Query: 4 ETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGH 63
E ++ TL GH + + +P + + + S S+D + +W + R + R +GH
Sbjct: 93 EAAKILRTLMGHKANICSLDFHP-YGEFVASGSQDTNIKLWDIRRKGCVF-----RYRGH 146
Query: 64 SHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 123
S + + S DG + S + D T++LWDL AGK F HT V V F + + S
Sbjct: 147 SQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLAS 206
Query: 124 SSRD 127
S D
Sbjct: 207 GSSD 210
Score = 137 (53.3 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 40/152 (26%), Positives = 73/152 (48%)
Query: 165 IIVSAGWDRMVKVWNLT--NCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
++ + G D V +W++ NC + + +GHT + +V ++ L +G + + +WDL
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSL--TGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL 92
Query: 223 NDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSL 281
K L TL+ H I +L F P F ++ Q +N+ L+ I +
Sbjct: 93 EAAKILRTLMGHKANICSLDFHPYGEF------VASGSQDTNIKLWDIRRKGCVFRYRGH 146
Query: 282 FRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA 313
+ V + FS D + + S++ D T+KLW+ A
Sbjct: 147 SQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 178
>FB|FBgn0023423 [details] [associations]
symbol:slmb "supernumerary limbs" species:7227 "Drosophila
melanogaster" [GO:0045879 "negative regulation of smoothened
signaling pathway" evidence=IMP] [GO:0030111 "regulation of Wnt
receptor signaling pathway" evidence=IMP;TAS] [GO:0008588 "release
of cytoplasmic sequestered NF-kappaB" evidence=IMP;TAS] [GO:0008589
"regulation of smoothened signaling pathway" evidence=TAS]
[GO:0000151 "ubiquitin ligase complex" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0030512
"negative regulation of transforming growth factor beta receptor
signaling pathway" evidence=NAS] [GO:0030178 "negative regulation
of Wnt receptor signaling pathway" evidence=IMP;NAS] [GO:0019005
"SCF ubiquitin ligase complex" evidence=NAS;TAS] [GO:0006508
"proteolysis" evidence=IMP] [GO:0045475 "locomotor rhythm"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=IMP;IPI]
[GO:0007611 "learning or memory" evidence=IMP] [GO:0008355
"olfactory learning" evidence=IMP] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=IMP] [GO:0046843 "dorsal
appendage formation" evidence=IMP] [GO:0030720 "oocyte localization
involved in germarium-derived egg chamber formation" evidence=IMP]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0030727
"germarium-derived female germ-line cyst formation" evidence=IMP]
[GO:0045849 "negative regulation of nurse cell apoptotic process"
evidence=IMP] [GO:0030707 "ovarian follicle cell development"
evidence=IMP] [GO:0007293 "germarium-derived egg chamber formation"
evidence=IMP] [GO:0030713 "ovarian follicle cell stalk formation"
evidence=IMP] [GO:0007304 "chorion-containing eggshell formation"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0046599 "regulation of centriole replication" evidence=IDA]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 SMART:SM01028 GO:GO:0007088
GO:GO:0008355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 GO:GO:0006508 SUPFAM:SSF81383 GO:GO:0007298
GO:GO:0045475 GO:GO:0019005 GO:GO:0004842 GO:GO:0030178
GO:GO:0046843 GO:GO:0030720 GO:GO:0030713 GO:GO:0030512
GO:GO:0030727 GO:GO:0030708 GO:GO:0008588 GO:GO:0045879
GO:GO:0046599 HSSP:Q9Y297 GO:GO:0060253 EMBL:AF032878
ProteinModelPortal:O44382 SMR:O44382 IntAct:O44382 STRING:O44382
PaxDb:O44382 PRIDE:O44382 FlyBase:FBgn0023423 HOGENOM:HOG000102803
InParanoid:O44382 OrthoDB:EOG4S7H55 ArrayExpress:O44382 Bgee:O44382
GO:GO:0045849 Uniprot:O44382
Length = 510
Score = 248 (92.4 bits), Expect = 8.6e-19, P = 8.6e-19
Identities = 90/293 (30%), Positives = 135/293 (46%)
Query: 32 ILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLW 91
I+S RDNT+ IW R D K L GH+ + + L D +SGS D T+R+W
Sbjct: 223 IVSGLRDNTIKIWD--RTDLQC---VKTLMGHTGSV--LCLQYDDKVIISGSSDSTVRVW 275
Query: 92 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTI--VEDGHS 149
D+ G+ H + VL + F+ N +V+ S+D++I +W+ + + T+ V GH
Sbjct: 276 DVNTGEMVNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMTSPSEITLRRVLVGHR 333
Query: 150 DWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCA 209
V+ V F + IVSA DR +KVW+ + C+ +GH + + L
Sbjct: 334 AAVNVVDFDEKY----IVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVV 387
Query: 210 SGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQ-----KIKL-DISRTLQK- 261
SG D + LWD+ G L L H +++ + F R KIK+ D+ L
Sbjct: 388 SGSSDNSIRLWDIECGACLRVLEGHEELVRCIRFDTKRIVSGAYDGKIKVWDLVAALDPR 447
Query: 262 --SNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTL 312
SN + +N T +FR D QIVSSS D TI +W+ L
Sbjct: 448 AASNTLC--LNTLVEHTG--RVFR------LQFDEFQIVSSSHDDTILIWDFL 490
Score = 162 (62.1 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 59/202 (29%), Positives = 91/202 (45%)
Query: 2 STETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLK 61
S + LR L GH V + + K+ I+S S D T+ +W + + + L
Sbjct: 319 SPSEITLRRVLVGHRAAVNVVDFDEKY---IVSASGDRTIKVWSTSTCEF-----VRTLN 370
Query: 62 GHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 121
GH I+ L +SGS D ++RLWD+ G R E H + V + F D ++I
Sbjct: 371 GHKRGIA--CLQYRDRLVVSGSSDNSIRLWDIECGACLRVLEGHEELVRCIRF--DTKRI 426
Query: 122 VSSSRDKTIKLWNTLAH----------CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGW 171
VS + D IK+W+ +A C T+VE H+ V ++F Q IVS+
Sbjct: 427 VSGAYDGKIKVWDLVAALDPRAASNTLCLNTLVE--HTGRVFRLQFD-EFQ---IVSSSH 480
Query: 172 DRMVKVWNLTNCKLKINHSGHT 193
D + +W+ N N +G T
Sbjct: 481 DDTILIWDFLNFTPNENKTGRT 502
Score = 157 (60.3 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 62/247 (25%), Positives = 112/247 (45%)
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
L D +SG D T+++WD + + HT VL + + D++ I+S S D T++
Sbjct: 216 LQYDDGKIVSGLRDNTIKIWDRTDLQCVKTLMGHTGSVLCLQY--DDKVIISGSSDSTVR 273
Query: 132 LWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTN-CKLKINH 189
+W+ T++ H + V +RF+ N ++V+ DR + VW++T+ ++ +
Sbjct: 274 VWDVNTGEMVNTLIH--HCEAVLHLRFN----NGMMVTCSKDRSIAVWDMTSPSEITLRR 327
Query: 190 S--GHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNR 246
GH +N V + ASG D +W + + + TL H I L +
Sbjct: 328 VLVGHRAAVNVVDFDEKYIVSASG--DRTIKVWSTSTCEFVRTLNGHKRGIACLQY---- 381
Query: 247 SFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTI 306
+ +L +S + S + L+ I G V + F D ++IVS + D I
Sbjct: 382 ---RDRLVVSGSSDNS-IRLWDIECGACLRVLEGHEELVRCIRF--DTKRIVSGAYDGKI 435
Query: 307 KLWNTLA 313
K+W+ +A
Sbjct: 436 KVWDLVA 442
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 240 (89.5 bits), Expect = 9.3e-19, P = 9.3e-19
Identities = 64/212 (30%), Positives = 102/212 (48%)
Query: 12 LNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV 71
L+GH G V +P T+ S D +++W + D NY LKGHS + ++
Sbjct: 52 LSGHEGEVYCCKFHPNGA-TLASSGYDRLILMWNVYGDCENYAT----LKGHSGAVMELH 106
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SSSRDKTI 130
++DG+ S S DKT+ +WD G+ +R + HT V S + Q+ + S D T+
Sbjct: 107 YNTDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTV 166
Query: 131 KLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS 190
KLW+ ++ + V V F N + I+S G D +KVW+L KL +
Sbjct: 167 KLWDIRKKASVHTFQNTYQ--VLSVTF--NDTSDQIISGGIDNDIKVWDLRQNKLIYSMQ 222
Query: 191 GHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
GH + +++S DGS S D + +WD+
Sbjct: 223 GHGDSVTGLSLSADGSYLLSNSMDNSVRVWDI 254
Score = 236 (88.1 bits), Expect = 3.5e-18, P = 3.5e-18
Identities = 72/244 (29%), Positives = 112/244 (45%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
TL GH+G V ++ N + S S D T+ +W D+ G KRLKGH+ F++
Sbjct: 94 TLKGHSGAVMELHYNTD-GSLLFSASTDKTVCVW-----DSETGERVKRLKGHTSFVNSC 147
Query: 71 VLSSDG-NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKT 129
+ G A +GS D T++LWD+ + F++ T VLSV F+ + QI+S D
Sbjct: 148 FPARRGPQLACTGSDDGTVKLWDIRKKASVHTFQN-TYQVLSVTFNDTSDQIISGGIDND 206
Query: 130 IKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT------NC 183
IK+W+ L K GH D V+ + S + ++S D V+VW++ C
Sbjct: 207 IKVWD-LRQNKLIYSMQGHGDSVTGLSLSAD--GSYLLSNSMDNSVRVWDIRPFAPKERC 263
Query: 184 KLKINHSGHTGYLNTVTVS--PDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITAL 240
+ H N + S DGS A+G D +WD + ++ L H + +
Sbjct: 264 VKIFQGNVHNFEKNLLRCSWSADGSKIAAGSADRFVYIWDTTTRRIVYKLPGHAGSVNEV 323
Query: 241 CFSP 244
F P
Sbjct: 324 AFHP 327
Score = 182 (69.1 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 61/268 (22%), Positives = 123/268 (45%)
Query: 56 PQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAF 114
P L GH + +G S +D+ + +W++ + + H+ V+ + +
Sbjct: 48 PIMLLSGHEGEVYCCKFHPNGATLASSGYDRLILMWNVYGDCENYATLKGHSGAVMELHY 107
Query: 115 SVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWV-SCVRFSPNHQNPIIVSAGWDR 173
+ D + S+S DKT+ +W++ + ++ GH+ +V SC P + P + G D
Sbjct: 108 NTDGSLLFSASTDKTVCVWDSETGERVKRLK-GHTSFVNSCF---PARRGPQLACTGSDD 163
Query: 174 -MVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV 232
VK+W++ K ++ +T + +VT + SGG D + +WDL K ++++
Sbjct: 164 GTVKLWDIRK-KASVHTFQNTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQ 222
Query: 233 -HNDIITALCFSPNRSF-------QKIKL-DISRTLQKSNLILYPINHGKMETPFFSLFR 283
H D +T L S + S+ +++ DI K + I G + F +
Sbjct: 223 GHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCV--KIFQGNVHN--FE--K 276
Query: 284 DVLSVAFSVDNRQIVSSSRDKTIKLWNT 311
++L ++S D +I + S D+ + +W+T
Sbjct: 277 NLLRCSWSADGSKIAAGSADRFVYIWDT 304
Score = 168 (64.2 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 47/225 (20%), Positives = 94/225 (41%)
Query: 3 TETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKG 62
+ET + L GH +V + P + S D T+ +W + R + Q
Sbjct: 128 SETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDI-RKKASVHTFQ----- 181
Query: 63 HSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 122
+++ + + + + +SG D +++WDL K + H V ++ S D ++
Sbjct: 182 NTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLL 241
Query: 123 SSSRDKTIKLWNTLA-----HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKV 177
S+S D ++++W+ C + H+ + +R S + I + DR V +
Sbjct: 242 SNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSADRFVYI 301
Query: 178 WNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
W+ T ++ GH G +N V P+ + SG D + ++
Sbjct: 302 WDTTTRRIVYKLPGHAGSVNEVAFHPEEPIVLSGSSDKRLYIGEI 346
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 247 (92.0 bits), Expect = 9.6e-19, Sum P(2) = 9.6e-19
Identities = 58/164 (35%), Positives = 83/164 (50%)
Query: 60 LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 119
L GH+ + + L++ ++GS ++R+WDL A K R H ++ S+ F
Sbjct: 59 LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE 118
Query: 120 QIVSSSRDKTIKLWNTLAH-CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVW 178
+ S S+D IKLW+ C F GHS V C+RFSP+ + + SA D VK+W
Sbjct: 119 FVASGSQDTNIKLWDIRRKGCVFRY--RGHSQAVRCLRFSPDGK--WLASAADDHTVKLW 174
Query: 179 NLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
+LT K+ GHTG +N V P+ L ASG D WDL
Sbjct: 175 DLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
Score = 183 (69.5 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 48/159 (30%), Positives = 77/159 (48%)
Query: 4 ETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGH 63
E ++ TL GH + + +P + + + S S+D + +W + R + R +GH
Sbjct: 93 EAAKILRTLMGHKANICSLDFHP-YGEFVASGSQDTNIKLWDIRRKGCVF-----RYRGH 146
Query: 64 SHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 123
S + + S DG + S + D T++LWDL AGK F HT V V F + + S
Sbjct: 147 SQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLAS 206
Query: 124 SSRDKTIKLWNTLAHCKFTIVE--DGHSDWVSCVRFSPN 160
S D+TI+ W+ KF +V +G V V F+P+
Sbjct: 207 GSSDRTIRFWDLE---KFQVVSCIEGEPGPVRSVLFNPD 242
Score = 180 (68.4 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 48/190 (25%), Positives = 79/190 (41%)
Query: 58 KRLKGHSHFISDIVLS-SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 116
+ + H+ +S +VL + G +G D + LW + HT V SV +
Sbjct: 14 QEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNT 73
Query: 117 DNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVK 176
IV+ S+ +I++W+ L K GH + + F P + + S D +K
Sbjct: 74 PEELIVAGSQSGSIRVWD-LEAAKILRTLMGHKANICSLDFHPYGE--FVASGSQDTNIK 130
Query: 177 VWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HND 235
+W++ + GH+ + + SPDG AS D LWDL GK + H
Sbjct: 131 LWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTG 190
Query: 236 IITALCFSPN 245
+ + F PN
Sbjct: 191 PVNVVEFHPN 200
Score = 170 (64.9 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 54/209 (25%), Positives = 89/209 (42%)
Query: 105 HTKDVLSVAFS-VDNRQIVSSSRDKTIKLWN-TLAHCKFTIVEDGHSDWVSCVRFSPNHQ 162
H +V S+ R + + D + LW+ +C ++ GH+ V VR N
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT--GHTSPVESVRL--NTP 74
Query: 163 NPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
+IV+ ++VW+L K+ GH + ++ P G ASG +D N LWD+
Sbjct: 75 EELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDI 134
Query: 223 N-DGKHLHTLVHNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSL 281
G H+ + L FSP+ + D T++ L+ + GKM + F
Sbjct: 135 RRKGCVFRYRGHSQAVRCLRFSPDGKWLASAAD-DHTVK-----LWDLTAGKMMSEFPGH 188
Query: 282 FRDVLSVAFSVDNRQIVSSSRDKTIKLWN 310
V V F + + S S D+TI+ W+
Sbjct: 189 TGPVNVVEFHPNEYLLASGSSDRTIRFWD 217
Score = 137 (53.3 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 40/152 (26%), Positives = 73/152 (48%)
Query: 165 IIVSAGWDRMVKVWNLT--NCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
++ + G D V +W++ NC + + +GHT + +V ++ L +G + + +WDL
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSL--TGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL 92
Query: 223 NDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSL 281
K L TL+ H I +L F P F ++ Q +N+ L+ I +
Sbjct: 93 EAAKILRTLMGHKANICSLDFHPYGEF------VASGSQDTNIKLWDIRRKGCVFRYRGH 146
Query: 282 FRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA 313
+ V + FS D + + S++ D T+KLW+ A
Sbjct: 147 SQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 178
Score = 42 (19.8 bits), Expect = 9.6e-19, Sum P(2) = 9.6e-19
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 359 LFAGYSDNTIRVWQV 373
L +G SD TIR W +
Sbjct: 204 LASGSSDRTIRFWDL 218
Score = 40 (19.1 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 335 VVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVW 371
VVS + +P S+ ++ DG L++G D+ +RV+
Sbjct: 223 VVS-CIEGEPGPVRSVLFNPDGCCLYSGCQDS-LRVY 257
Score = 37 (18.1 bits), Expect = 3.2e-18, Sum P(2) = 3.2e-18
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 326 KMVEELRPDVVSQSTKADPPMCLSL 350
+ VE + D +SQ K MC+ L
Sbjct: 478 QQVELVDEDAMSQIRKGHDTMCVVL 502
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 247 (92.0 bits), Expect = 9.6e-19, Sum P(2) = 9.6e-19
Identities = 58/164 (35%), Positives = 83/164 (50%)
Query: 60 LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 119
L GH+ + + L++ ++GS ++R+WDL A K R H ++ S+ F
Sbjct: 59 LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE 118
Query: 120 QIVSSSRDKTIKLWNTLAH-CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVW 178
+ S S+D IKLW+ C F GHS V C+RFSP+ + + SA D VK+W
Sbjct: 119 FVASGSQDTNIKLWDIRRKGCVFRY--RGHSQAVRCLRFSPDGK--WLASAADDHTVKLW 174
Query: 179 NLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
+LT K+ GHTG +N V P+ L ASG D WDL
Sbjct: 175 DLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
Score = 183 (69.5 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 48/159 (30%), Positives = 77/159 (48%)
Query: 4 ETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGH 63
E ++ TL GH + + +P + + + S S+D + +W + R + R +GH
Sbjct: 93 EAAKILRTLMGHKANICSLDFHP-YGEFVASGSQDTNIKLWDIRRKGCVF-----RYRGH 146
Query: 64 SHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 123
S + + S DG + S + D T++LWDL AGK F HT V V F + + S
Sbjct: 147 SQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLAS 206
Query: 124 SSRDKTIKLWNTLAHCKFTIVE--DGHSDWVSCVRFSPN 160
S D+TI+ W+ KF +V +G V V F+P+
Sbjct: 207 GSSDRTIRFWDLE---KFQVVSCIEGEPGPVRSVLFNPD 242
Score = 180 (68.4 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 48/190 (25%), Positives = 79/190 (41%)
Query: 58 KRLKGHSHFISDIVLS-SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 116
+ + H+ +S +VL + G +G D + LW + HT V SV +
Sbjct: 14 QEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNT 73
Query: 117 DNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVK 176
IV+ S+ +I++W+ L K GH + + F P + + S D +K
Sbjct: 74 PEELIVAGSQSGSIRVWD-LEAAKILRTLMGHKANICSLDFHPYGE--FVASGSQDTNIK 130
Query: 177 VWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HND 235
+W++ + GH+ + + SPDG AS D LWDL GK + H
Sbjct: 131 LWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTG 190
Query: 236 IITALCFSPN 245
+ + F PN
Sbjct: 191 PVNVVEFHPN 200
Score = 170 (64.9 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 54/209 (25%), Positives = 89/209 (42%)
Query: 105 HTKDVLSVAFS-VDNRQIVSSSRDKTIKLWN-TLAHCKFTIVEDGHSDWVSCVRFSPNHQ 162
H +V S+ R + + D + LW+ +C ++ GH+ V VR N
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT--GHTSPVESVRL--NTP 74
Query: 163 NPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
+IV+ ++VW+L K+ GH + ++ P G ASG +D N LWD+
Sbjct: 75 EELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDI 134
Query: 223 N-DGKHLHTLVHNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSL 281
G H+ + L FSP+ + D T++ L+ + GKM + F
Sbjct: 135 RRKGCVFRYRGHSQAVRCLRFSPDGKWLASAAD-DHTVK-----LWDLTAGKMMSEFPGH 188
Query: 282 FRDVLSVAFSVDNRQIVSSSRDKTIKLWN 310
V V F + + S S D+TI+ W+
Sbjct: 189 TGPVNVVEFHPNEYLLASGSSDRTIRFWD 217
Score = 137 (53.3 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 40/152 (26%), Positives = 73/152 (48%)
Query: 165 IIVSAGWDRMVKVWNLT--NCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
++ + G D V +W++ NC + + +GHT + +V ++ L +G + + +WDL
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSL--TGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL 92
Query: 223 NDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSL 281
K L TL+ H I +L F P F ++ Q +N+ L+ I +
Sbjct: 93 EAAKILRTLMGHKANICSLDFHPYGEF------VASGSQDTNIKLWDIRRKGCVFRYRGH 146
Query: 282 FRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA 313
+ V + FS D + + S++ D T+KLW+ A
Sbjct: 147 SQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 178
Score = 42 (19.8 bits), Expect = 9.6e-19, Sum P(2) = 9.6e-19
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 359 LFAGYSDNTIRVWQV 373
L +G SD TIR W +
Sbjct: 204 LASGSSDRTIRFWDL 218
Score = 40 (19.1 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 335 VVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVW 371
VVS + +P S+ ++ DG L++G D+ +RV+
Sbjct: 223 VVS-CIEGEPGPVRSVLFNPDGCCLYSGCQDS-LRVY 257
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 247 (92.0 bits), Expect = 9.6e-19, Sum P(2) = 9.6e-19
Identities = 58/164 (35%), Positives = 83/164 (50%)
Query: 60 LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 119
L GH+ + + L++ ++GS ++R+WDL A K R H ++ S+ F
Sbjct: 59 LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE 118
Query: 120 QIVSSSRDKTIKLWNTLAH-CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVW 178
+ S S+D IKLW+ C F GHS V C+RFSP+ + + SA D VK+W
Sbjct: 119 FVASGSQDTNIKLWDIRRKGCVFRY--RGHSQAVRCLRFSPDGK--WLASAADDHTVKLW 174
Query: 179 NLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
+LT K+ GHTG +N V P+ L ASG D WDL
Sbjct: 175 DLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
Score = 183 (69.5 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 48/159 (30%), Positives = 77/159 (48%)
Query: 4 ETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGH 63
E ++ TL GH + + +P + + + S S+D + +W + R + R +GH
Sbjct: 93 EAAKILRTLMGHKANICSLDFHP-YGEFVASGSQDTNIKLWDIRRKGCVF-----RYRGH 146
Query: 64 SHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 123
S + + S DG + S + D T++LWDL AGK F HT V V F + + S
Sbjct: 147 SQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLAS 206
Query: 124 SSRDKTIKLWNTLAHCKFTIVE--DGHSDWVSCVRFSPN 160
S D+TI+ W+ KF +V +G V V F+P+
Sbjct: 207 GSSDRTIRFWDLE---KFQVVSCIEGEPGPVRSVLFNPD 242
Score = 180 (68.4 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 48/190 (25%), Positives = 79/190 (41%)
Query: 58 KRLKGHSHFISDIVLS-SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 116
+ + H+ +S +VL + G +G D + LW + HT V SV +
Sbjct: 14 QEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNT 73
Query: 117 DNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVK 176
IV+ S+ +I++W+ L K GH + + F P + + S D +K
Sbjct: 74 PEELIVAGSQSGSIRVWD-LEAAKILRTLMGHKANICSLDFHPYGE--FVASGSQDTNIK 130
Query: 177 VWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HND 235
+W++ + GH+ + + SPDG AS D LWDL GK + H
Sbjct: 131 LWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTG 190
Query: 236 IITALCFSPN 245
+ + F PN
Sbjct: 191 PVNVVEFHPN 200
Score = 170 (64.9 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 54/209 (25%), Positives = 89/209 (42%)
Query: 105 HTKDVLSVAFS-VDNRQIVSSSRDKTIKLWN-TLAHCKFTIVEDGHSDWVSCVRFSPNHQ 162
H +V S+ R + + D + LW+ +C ++ GH+ V VR N
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT--GHTSPVESVRL--NTP 74
Query: 163 NPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
+IV+ ++VW+L K+ GH + ++ P G ASG +D N LWD+
Sbjct: 75 EELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDI 134
Query: 223 N-DGKHLHTLVHNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSL 281
G H+ + L FSP+ + D T++ L+ + GKM + F
Sbjct: 135 RRKGCVFRYRGHSQAVRCLRFSPDGKWLASAAD-DHTVK-----LWDLTAGKMMSEFPGH 188
Query: 282 FRDVLSVAFSVDNRQIVSSSRDKTIKLWN 310
V V F + + S S D+TI+ W+
Sbjct: 189 TGPVNVVEFHPNEYLLASGSSDRTIRFWD 217
Score = 137 (53.3 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 40/152 (26%), Positives = 73/152 (48%)
Query: 165 IIVSAGWDRMVKVWNLT--NCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
++ + G D V +W++ NC + + +GHT + +V ++ L +G + + +WDL
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSL--TGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL 92
Query: 223 NDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSL 281
K L TL+ H I +L F P F ++ Q +N+ L+ I +
Sbjct: 93 EAAKILRTLMGHKANICSLDFHPYGEF------VASGSQDTNIKLWDIRRKGCVFRYRGH 146
Query: 282 FRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA 313
+ V + FS D + + S++ D T+KLW+ A
Sbjct: 147 SQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 178
Score = 42 (19.8 bits), Expect = 9.6e-19, Sum P(2) = 9.6e-19
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 359 LFAGYSDNTIRVWQV 373
L +G SD TIR W +
Sbjct: 204 LASGSSDRTIRFWDL 218
Score = 40 (19.1 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 335 VVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVW 371
VVS + +P S+ ++ DG L++G D+ +RV+
Sbjct: 223 VVS-CIEGEPGPVRSVLFNPDGCCLYSGCQDS-LRVY 257
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 247 (92.0 bits), Expect = 9.8e-19, Sum P(2) = 9.8e-19
Identities = 58/164 (35%), Positives = 83/164 (50%)
Query: 60 LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 119
L GH+ + + L++ ++GS ++R+WDL A K R H ++ S+ F
Sbjct: 59 LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE 118
Query: 120 QIVSSSRDKTIKLWNTLAH-CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVW 178
+ S S+D IKLW+ C F GHS V C+RFSP+ + + SA D VK+W
Sbjct: 119 FVASGSQDTNIKLWDIRRKGCVFRY--RGHSQAVRCLRFSPDGK--WLASAADDHTVKLW 174
Query: 179 NLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
+LT K+ GHTG +N V P+ L ASG D WDL
Sbjct: 175 DLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
Score = 183 (69.5 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 48/159 (30%), Positives = 77/159 (48%)
Query: 4 ETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGH 63
E ++ TL GH + + +P + + + S S+D + +W + R + R +GH
Sbjct: 93 EAAKILRTLMGHKANICSLDFHP-YGEFVASGSQDTNIKLWDIRRKGCVF-----RYRGH 146
Query: 64 SHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 123
S + + S DG + S + D T++LWDL AGK F HT V V F + + S
Sbjct: 147 SQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLAS 206
Query: 124 SSRDKTIKLWNTLAHCKFTIVE--DGHSDWVSCVRFSPN 160
S D+TI+ W+ KF +V +G V V F+P+
Sbjct: 207 GSSDRTIRFWDLE---KFQVVSCIEGEPGPVRSVLFNPD 242
Score = 180 (68.4 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 48/190 (25%), Positives = 79/190 (41%)
Query: 58 KRLKGHSHFISDIVLS-SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 116
+ + H+ +S +VL + G +G D + LW + HT V SV +
Sbjct: 14 QEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNT 73
Query: 117 DNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVK 176
IV+ S+ +I++W+ L K GH + + F P + + S D +K
Sbjct: 74 PEELIVAGSQSGSIRVWD-LEAAKILRTLMGHKANICSLDFHPYGE--FVASGSQDTNIK 130
Query: 177 VWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HND 235
+W++ + GH+ + + SPDG AS D LWDL GK + H
Sbjct: 131 LWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTG 190
Query: 236 IITALCFSPN 245
+ + F PN
Sbjct: 191 PVNVVEFHPN 200
Score = 170 (64.9 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 54/209 (25%), Positives = 89/209 (42%)
Query: 105 HTKDVLSVAFS-VDNRQIVSSSRDKTIKLWN-TLAHCKFTIVEDGHSDWVSCVRFSPNHQ 162
H +V S+ R + + D + LW+ +C ++ GH+ V VR N
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT--GHTSPVESVRL--NTP 74
Query: 163 NPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
+IV+ ++VW+L K+ GH + ++ P G ASG +D N LWD+
Sbjct: 75 EELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDI 134
Query: 223 N-DGKHLHTLVHNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSL 281
G H+ + L FSP+ + D T++ L+ + GKM + F
Sbjct: 135 RRKGCVFRYRGHSQAVRCLRFSPDGKWLASAAD-DHTVK-----LWDLTAGKMMSEFPGH 188
Query: 282 FRDVLSVAFSVDNRQIVSSSRDKTIKLWN 310
V V F + + S S D+TI+ W+
Sbjct: 189 TGPVNVVEFHPNEYLLASGSSDRTIRFWD 217
Score = 137 (53.3 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 40/152 (26%), Positives = 73/152 (48%)
Query: 165 IIVSAGWDRMVKVWNLT--NCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
++ + G D V +W++ NC + + +GHT + +V ++ L +G + + +WDL
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSL--TGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL 92
Query: 223 NDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSL 281
K L TL+ H I +L F P F ++ Q +N+ L+ I +
Sbjct: 93 EAAKILRTLMGHKANICSLDFHPYGEF------VASGSQDTNIKLWDIRRKGCVFRYRGH 146
Query: 282 FRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA 313
+ V + FS D + + S++ D T+KLW+ A
Sbjct: 147 SQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 178
Score = 42 (19.8 bits), Expect = 9.8e-19, Sum P(2) = 9.8e-19
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 359 LFAGYSDNTIRVWQV 373
L +G SD TIR W +
Sbjct: 204 LASGSSDRTIRFWDL 218
Score = 40 (19.1 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 335 VVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVW 371
VVS + +P S+ ++ DG L++G D+ +RV+
Sbjct: 223 VVS-CIEGEPGPVRSVLFNPDGCCLYSGCQDS-LRVY 257
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 249 (92.7 bits), Expect = 9.9e-19, P = 9.9e-19
Identities = 69/226 (30%), Positives = 110/226 (48%)
Query: 12 LNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV 71
L GH + + + K T++S S D T+ +W D G QK + ++ ++
Sbjct: 384 LTGHEQEIYSLDFS-KDGKTLVSGSGDRTVCLW-----DVEAG-EQKLILHTDDGVTTVM 436
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
S DG + +GS DK +R+W ++G + H + V SVAFS D + +VS S D TIK
Sbjct: 437 FSPDGQFIAAGSLDKVIRIWT-SSGTLVEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIK 495
Query: 132 LW-----NTLAH--------CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVW 178
LW + +A CK T GH D++ V SP+ + I+S DR ++ W
Sbjct: 496 LWELQCVSNVAPSMYKEGGICKQTFT--GHKDFILSVTVSPDGK--WIISGSKDRTIQFW 551
Query: 179 NLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLND 224
+ + ++ GH + +V VSP+G A+G D+ A +W D
Sbjct: 552 SPDSPHSQLTLQGHNNSVISVAVSPNGHCFATGSGDLRARIWSYED 597
Score = 231 (86.4 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 70/259 (27%), Positives = 121/259 (46%)
Query: 66 FISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSS 125
++ + S DG Y +G D+ +R+WD+A + R H +++ S+ FS D + +VS S
Sbjct: 348 YVRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGS 407
Query: 126 RDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKL 185
D+T+ LW+ A + I+ D V+ V FSP+ Q I + D+++++W + +
Sbjct: 408 GDRTVCLWDVEAGEQKLILHT--DDGVTTVMFSPDGQ--FIAAGSLDKVIRIWTSSGTLV 463
Query: 186 KINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL----NDGKHLH--------TLV- 232
+ H GH + +V SPDG SG D LW+L N ++ T
Sbjct: 464 EQLH-GHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTG 522
Query: 233 HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPIN-HGKMETPFFSLFRDVLSVAFS 291
H D I ++ SP+ + I RT+Q P + H ++ + V+SVA S
Sbjct: 523 HKDFILSVTVSPDGKWI-ISGSKDRTIQ----FWSPDSPHSQLTLQGHN--NSVISVAVS 575
Query: 292 VDNRQIVSSSRDKTIKLWN 310
+ + S D ++W+
Sbjct: 576 PNGHCFATGSGDLRARIWS 594
Score = 197 (74.4 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 70/272 (25%), Positives = 120/272 (44%)
Query: 104 DHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHS--DWVSCVRFSPNH 161
+HT + V FS D + +++ ++ ++N T++++ S + VR
Sbjct: 297 EHTSVICYVRFSADGK-FLATGCNRAAMVFNVETGKLITLLQEESSKREGDLYVRSVAFS 355
Query: 162 QNPIIVSAGW-DRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLW 220
+ ++ G D+ +++W++ ++ +GH + ++ S DG SG D LW
Sbjct: 356 PDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLW 415
Query: 221 DLNDGKHLHTLVHNDIITALCFSPNRSFQKI-KLDISRTLQKSNLILYPINHGKMETPFF 279
D+ G+ L +D +T + FSP+ F LD + S+ L HG E+
Sbjct: 416 DVEAGEQKLILHTDDGVTTVMFSPDGQFIAAGSLDKVIRIWTSSGTLVEQLHGHEES--- 472
Query: 280 SLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQS 339
V SVAFS D + +VS S D TIKLW C + M +E + Q+
Sbjct: 473 -----VYSVAFSPDGKYLVSGSLDNTIKLWEL--QCVSNVAP----SMYKE--GGICKQT 519
Query: 340 TKADPPMCLSLAWSTDGQTLFAGYSDNTIRVW 371
LS+ S DG+ + +G D TI+ W
Sbjct: 520 FTGHKDFILSVTVSPDGKWIISGSKDRTIQFW 551
Score = 39 (18.8 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 348 LSLAWSTDGQTLFAGYSDNTIRVW 371
+S+A S +G G D R+W
Sbjct: 570 ISVAVSPNGHCFATGSGDLRARIW 593
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 247 (92.0 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 58/164 (35%), Positives = 83/164 (50%)
Query: 60 LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 119
L GH+ + + L++ ++GS ++R+WDL A K R H ++ S+ F
Sbjct: 59 LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE 118
Query: 120 QIVSSSRDKTIKLWNTLAH-CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVW 178
+ S S+D IKLW+ C F GHS V C+RFSP+ + + SA D VK+W
Sbjct: 119 FVASGSQDTNIKLWDIRRKGCVFRY--RGHSQAVRCLRFSPDGK--WLASAADDHTVKLW 174
Query: 179 NLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
+LT K+ GHTG +N V P+ L ASG D WDL
Sbjct: 175 DLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
Score = 182 (69.1 bits), Expect = 6.3e-11, P = 6.3e-11
Identities = 47/159 (29%), Positives = 77/159 (48%)
Query: 4 ETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGH 63
E ++ TL GH + + +P + + + S S+D + +W + R + R +GH
Sbjct: 93 EAAKILRTLMGHKANICSLDFHP-YGEFVASGSQDTNIKLWDIRRKGCVF-----RYRGH 146
Query: 64 SHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 123
S + + S DG + S + D T++LWDL AGK F HT V V F + + S
Sbjct: 147 SQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLAS 206
Query: 124 SSRDKTIKLWNTLAHCKFTIVE--DGHSDWVSCVRFSPN 160
S D+TI+ W+ KF +V +G V + F+P+
Sbjct: 207 GSSDRTIRFWDLE---KFQVVSCIEGEPGPVRSILFNPD 242
Score = 180 (68.4 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 48/190 (25%), Positives = 79/190 (41%)
Query: 58 KRLKGHSHFISDIVLS-SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 116
+ + H+ +S +VL + G +G D + LW + HT V SV +
Sbjct: 14 QEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNT 73
Query: 117 DNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVK 176
IV+ S+ +I++W+ L K GH + + F P + + S D +K
Sbjct: 74 PEELIVAGSQSGSIRVWD-LEAAKILRTLMGHKANICSLDFHPYGE--FVASGSQDTNIK 130
Query: 177 VWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HND 235
+W++ + GH+ + + SPDG AS D LWDL GK + H
Sbjct: 131 LWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTG 190
Query: 236 IITALCFSPN 245
+ + F PN
Sbjct: 191 PVNVVEFHPN 200
Score = 170 (64.9 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 54/209 (25%), Positives = 89/209 (42%)
Query: 105 HTKDVLSVAFS-VDNRQIVSSSRDKTIKLWN-TLAHCKFTIVEDGHSDWVSCVRFSPNHQ 162
H +V S+ R + + D + LW+ +C ++ GH+ V VR N
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT--GHTSPVESVRL--NTP 74
Query: 163 NPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
+IV+ ++VW+L K+ GH + ++ P G ASG +D N LWD+
Sbjct: 75 EELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDI 134
Query: 223 N-DGKHLHTLVHNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSL 281
G H+ + L FSP+ + D T++ L+ + GKM + F
Sbjct: 135 RRKGCVFRYRGHSQAVRCLRFSPDGKWLASAAD-DHTVK-----LWDLTAGKMMSEFPGH 188
Query: 282 FRDVLSVAFSVDNRQIVSSSRDKTIKLWN 310
V V F + + S S D+TI+ W+
Sbjct: 189 TGPVNVVEFHPNEYLLASGSSDRTIRFWD 217
Score = 137 (53.3 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 40/152 (26%), Positives = 73/152 (48%)
Query: 165 IIVSAGWDRMVKVWNLT--NCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
++ + G D V +W++ NC + + +GHT + +V ++ L +G + + +WDL
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSL--TGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL 92
Query: 223 NDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSL 281
K L TL+ H I +L F P F ++ Q +N+ L+ I +
Sbjct: 93 EAAKILRTLMGHKANICSLDFHPYGEF------VASGSQDTNIKLWDIRRKGCVFRYRGH 146
Query: 282 FRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA 313
+ V + FS D + + S++ D T+KLW+ A
Sbjct: 147 SQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 178
Score = 42 (19.8 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 359 LFAGYSDNTIRVWQV 373
L +G SD TIR W +
Sbjct: 204 LASGSSDRTIRFWDL 218
Score = 41 (19.5 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 335 VVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVW 371
VVS + +P S+ ++ DG L++G D+ +RV+
Sbjct: 223 VVS-CIEGEPGPVRSILFNPDGCCLYSGCQDS-LRVY 257
>UNIPROTKB|Q6GMD2 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GO:GO:0055087 CTD:80349 HOVERGEN:HBG059813 KO:K12602
EMBL:BC074136 RefSeq:NP_001086055.1 UniGene:Xl.23922
ProteinModelPortal:Q6GMD2 GeneID:444484 KEGG:xla:444484
Xenbase:XB-GENE-5751613 Uniprot:Q6GMD2
Length = 305
Score = 228 (85.3 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 78/280 (27%), Positives = 128/280 (45%)
Query: 51 TNYGVPQKRLKGHSHFISDIVL---SSDGN-YALSGSWDKTLRLWDLAAGKTTRRF--ED 104
T Y + K+ H I + S+DG+ +SGS D +++W + + ++ E
Sbjct: 3 TQYSILFKQEHAHEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLEMQWALEG 62
Query: 105 HTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSD-WVSCVRFSPNHQN 163
H V+SV S + SSS D I+LW+ + + ++ G D W V FSP+ Q+
Sbjct: 63 HQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQIRSIDAGPVDAW--SVAFSPDSQH 120
Query: 164 PIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLN 223
+ + V ++ + K + + ++ ++ SPDG ASG D ++D+
Sbjct: 121 --LATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIA 178
Query: 224 DGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLF 282
GK LHTL H I +L FS + D + +Y + H +
Sbjct: 179 TGKLLHTLEGHAMPIRSLTFSTDSQLLVTASD------DGYIKIYDVQHASLAATLSGHG 232
Query: 283 RDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAH-CKFTIVD 321
VL+VAFS D+ VSSS DK++K+W+ A C T +D
Sbjct: 233 SWVLNVAFSPDDAHFVSSSSDKSVKVWDVSARTCVHTFLD 272
Score = 206 (77.6 bits), Expect = 8.2e-15, P = 8.2e-15
Identities = 51/168 (30%), Positives = 80/168 (47%)
Query: 54 GVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 113
G + L FI I S DG Y SG+ D + ++D+A GK E H + S+
Sbjct: 138 GKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLT 197
Query: 114 FSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDR 173
FS D++ +V++S D IK+++ + H GH WV V FSP+ + VS+ D+
Sbjct: 198 FSTDSQLLVTASDDGYIKIYD-VQHASLAATLSGHGSWVLNVAFSPDDAH--FVSSSSDK 254
Query: 174 MVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWD 221
VKVW+++ H + V + +GS S G D ++D
Sbjct: 255 SVKVWDVSARTCVHTFLDHQDQVWGVKYNRNGSKIVSVGDDQEIHVYD 302
Score = 200 (75.5 bits), Expect = 5.0e-14, P = 5.0e-14
Identities = 58/247 (23%), Positives = 114/247 (46%)
Query: 2 STETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLK 61
S E L+++ L GH V + +P + + S S D + +W L + +
Sbjct: 50 SDERLEMQWALEGHQLGVVSVDVSPS-GNIMASSSLDAHIRLWDLESGKQIRSIDAGPVD 108
Query: 62 GHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 121
S + S D + +GS + ++ + GK + K +LS+A+S D + +
Sbjct: 109 AWS-----VAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYL 163
Query: 122 VSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT 181
S + D I +++ +A K +GH+ + + FS + Q ++V+A D +K++++
Sbjct: 164 ASGAIDGIINIFD-IATGKLLHTLEGHAMPIRSLTFSTDSQ--LLVTASDDGYIKIYDVQ 220
Query: 182 NCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITAL 240
+ L SGH ++ V SPD + S D + +WD++ +HT + H D + +
Sbjct: 221 HASLAATLSGHGSWVLNVAFSPDDAHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGV 280
Query: 241 CFSPNRS 247
++ N S
Sbjct: 281 KYNRNGS 287
Score = 119 (46.9 bits), Expect = 0.00017, P = 0.00017
Identities = 57/265 (21%), Positives = 114/265 (43%)
Query: 121 IVSSSRDKTIKLWN-TLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
++S S D +K+W + + +GH V V SP+ I+ S+ D +++W+
Sbjct: 35 VISGSLDDLVKVWKWSDERLEMQWALEGHQLGVVSVDVSPSGN--IMASSSLDAHIRLWD 92
Query: 180 LTNCKLKINHSGHTGYLN--TVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTL-VHNDI 236
L + K +I S G ++ +V SPD A+G ++ + GK ++L
Sbjct: 93 LESGK-QIR-SIDAGPVDAWSVAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKF 150
Query: 237 ITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQ 296
I ++ +SP+ + ++ + ++ I GK+ + S+ FS D++
Sbjct: 151 ILSIAYSPDGKY------LASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSTDSQL 204
Query: 297 IVSSSRDKTIKLWNTL-AHCKFTIVDLETKKMVEELRPDVVS-QSTKADPPMCLSLAWST 354
+V++S D IK+++ A T+ + + PD S+ +D + + W
Sbjct: 205 LVTASDDGYIKIYDVQHASLAATLSGHGSWVLNVAFSPDDAHFVSSSSDKSVKV---WDV 261
Query: 355 DGQTLFAGYSDNTIRVWQVSVTSRG 379
+T + D+ +VW V G
Sbjct: 262 SARTCVHTFLDHQDQVWGVKYNRNG 286
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 253 (94.1 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 86/302 (28%), Positives = 141/302 (46%)
Query: 12 LNGHNGWVTQIATNPKFP-DTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
L GH+ + T +F + I+S S DNTL +W G + L GH+ +
Sbjct: 990 LKGHDD---HVITCLQFSGNRIVSGSDDNTLKVWSAVN-----GKCLRTLVGHTGGVWSS 1041
Query: 71 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 130
+S GN +SGS D+TL++WD+ +G + HT V + + ++VS SRD T+
Sbjct: 1042 QMS--GNIIISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCM--HLHGSKVVSGSRDATL 1097
Query: 131 KLWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINH 189
++W+ C +V GH V CV++ +IVS +D MVK+W+ +
Sbjct: 1098 RVWDIEQGSCLHVLV--GHLAAVRCVQYD----GKLIVSGAYDYMVKIWHPERQECLHTL 1151
Query: 190 SGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCFSPNRSFQ 249
GHT + ++ DG SG D + +WD+ G HTL+ + +T S Q
Sbjct: 1152 QGHTNRVYSLQF--DGLHVVSGSLDTSIRVWDVETGNCKHTLMGHQSLT----SGMELRQ 1205
Query: 250 KIKLDISRTLQKSNLILYPINHGK-METPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKL 308
I +S S + ++ I G+ ++T ++R +V+SS D T+KL
Sbjct: 1206 NIL--VSGNAD-STVKVWDITTGQCLQTLSGPNKHHSAVTCLQFNSRFVVTSSDDGTVKL 1262
Query: 309 WN 310
W+
Sbjct: 1263 WD 1264
Score = 192 (72.6 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 64/227 (28%), Positives = 98/227 (43%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
TL GH V + + ++S SRD TL +W D G L GH + +
Sbjct: 1070 TLQGHTSTVRCMHLHGS---KVVSGSRDATLRVW-----DIEQGSCLHVLVGHLAAVRCV 1121
Query: 71 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 130
DG +SG++D +++W + + HT V S+ F D +VS S D +I
Sbjct: 1122 --QYDGKLIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQF--DGLHVVSGSLDTSI 1177
Query: 131 KLWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINH 189
++W+ +CK T++ GH S + N I+VS D VKVW++T +
Sbjct: 1178 RVWDVETGNCKHTLM--GHQSLTSGMELRQN----ILVSGNADSTVKVWDITTGQCLQTL 1231
Query: 190 SGHTGYLNTVTVSPDGS-LCASGGKDMNAMLWDLNDGKHLHTLVHND 235
SG + + VT S + D LWD+ G + LV D
Sbjct: 1232 SGPNKHHSAVTCLQFNSRFVVTSSDDGTVKLWDVKTGDFIRNLVALD 1278
>UNIPROTKB|B3KPU1 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246 EMBL:AC009488
HOGENOM:HOG000176356 HOVERGEN:HBG000188 UniGene:Hs.185172
HGNC:HGNC:4398 EMBL:AK056750 IPI:IPI00924758 SMR:B3KPU1
STRING:B3KPU1 Ensembl:ENST00000419828 Ensembl:ENST00000427895
Uniprot:B3KPU1
Length = 240
Score = 208 (78.3 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 59/207 (28%), Positives = 97/207 (46%)
Query: 38 DNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGK 97
DN I+ L + N V + L GH+ ++S D N ++ S D T LWD+ G+
Sbjct: 18 DNICSIYSLKTREGNVRV-SRELPGHTGYLSCCRFLDD-NQIITSSGDTTCALWDIETGQ 75
Query: 98 TTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTL-AHCKFTIVEDGHSDWVSCVR 156
T F H+ DV+S++ + D R VS + D +IKLW+ + C+ T + GH ++ V
Sbjct: 76 QTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFI--GHESDINAVA 133
Query: 157 FSPNHQNPIIVSAGWDRMVKVWNLTNCK--LKINHSGHTGYLNTVTVSPDGSLCASGGKD 214
F PN + D ++++L + L +H + +V S G L +G D
Sbjct: 134 FFPNGY--AFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDD 191
Query: 215 MNAMLWDLNDGKHLHTLV-HNDIITAL 240
N +WD G L H++ ++ L
Sbjct: 192 FNCNIWDAMKGDRAGVLAGHDNRVSCL 218
Score = 168 (64.2 bits), Expect = 7.0e-12, Sum P(2) = 7.0e-12
Identities = 57/239 (23%), Positives = 99/239 (41%)
Query: 76 GNYALSGSWDKTLRLWDLAA--G--KTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
GN+ G D ++ L G + +R HT LS +D+ QI++SS D T
Sbjct: 9 GNFVACGGLDNICSIYSLKTREGNVRVSRELPGHT-GYLSCCRFLDDNQIITSSGDTTCA 67
Query: 132 LWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSG 191
LW+ + + T+ GHS V + +P+ + VS D +K+W++ + + G
Sbjct: 68 LWD-IETGQQTVGFAGHSGDVMSLSLAPDGRT--FVSGACDASIKLWDVRDSMCRQTFIG 124
Query: 192 HTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCFSPNRSFQKI 251
H +N V P+G +G D L+DL + L H++II C + +F +
Sbjct: 125 HESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNII---CGITSVAFSRS 181
Query: 252 KLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWN 310
+ N ++ G V + + D + + S D +K+WN
Sbjct: 182 GRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 240
Score = 164 (62.8 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 47/172 (27%), Positives = 84/172 (48%)
Query: 147 GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGS 206
GH+ ++SC RF ++Q II S+G D +W++ + + +GH+G + +++++PDG
Sbjct: 41 GHTGYLSCCRFLDDNQ--IITSSG-DTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGR 97
Query: 207 LCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNR-SFQKIKLDISRTL----Q 260
SG D + LWD+ D T + H I A+ F PN +F D + L
Sbjct: 98 TFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRA 157
Query: 261 KSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTL 312
L++Y +H ++ + SVAFS R +++ D +W+ +
Sbjct: 158 DQELLMY--SHD-------NIICGITSVAFSRSGRLLLAGYDDFNCNIWDAM 200
Score = 162 (62.1 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 52/214 (24%), Positives = 96/214 (44%)
Query: 12 LNGHNGWVTQIATNPKFPDT--ILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISD 69
L GH G+++ +F D I++ S D T +W + G GHS +
Sbjct: 39 LPGHTGYLSCC----RFLDDNQIITSSGDTTCALWDIETGQQTVG-----FAGHSGDVMS 89
Query: 70 IVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKT 129
+ L+ DG +SG+ D +++LWD+ + F H D+ +VAF + + S D T
Sbjct: 90 LSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDAT 149
Query: 130 IKLWNTLAHCKFTIVE-DGHSDWVSCVRFSPNHQNPIIVSAGWDRM-VKVWNLTNCKLKI 187
+L++ A + + D ++ V FS + + ++ AG+D +W+
Sbjct: 150 CRLFDLRADQELLMYSHDNIICGITSVAFSRSGR---LLLAGYDDFNCNIWDAMKGDRAG 206
Query: 188 NHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWD 221
+GH ++ + V+ DG A+G D +W+
Sbjct: 207 VLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 240
Score = 38 (18.4 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 347 CLSLAWSTDGQTLFAGYSDNTIRVW 371
CL + + DG + G D+ +++W
Sbjct: 217 CLGV--TDDGMAVATGSWDSFLKIW 239
>UNIPROTKB|E7EP32 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246
PRINTS:PR00319 EMBL:AC009488 InterPro:IPR016346 PIRSF:PIRSF002394
HGNC:HGNC:4398 IPI:IPI00925530 SMR:E7EP32 Ensembl:ENST00000424361
Ensembl:ENST00000436220 Uniprot:E7EP32
Length = 296
Score = 216 (81.1 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 64/230 (27%), Positives = 105/230 (45%)
Query: 16 NGWVTQIATNPKFPDTILSCSR-DNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSS 74
+ WV A P ++C DN I+ L + N V + L GH+ ++S
Sbjct: 53 SSWVMTCAYAPS--GNFVACGGLDNICSIYSLKTREGNVRV-SRELPGHTGYLSCCRFLD 109
Query: 75 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 134
D N ++ S D T LWD+ G+ T F H+ DV+S++ + D R VS + D +IKLW+
Sbjct: 110 D-NQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWD 168
Query: 135 TL-AHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCK--LKINHSG 191
+ C+ T + GH ++ V F PN + D ++++L + L +H
Sbjct: 169 VRDSMCRQTFI--GHESDINAVAFFPNGY--AFTTGSDDATCRLFDLRADQELLMYSHDN 224
Query: 192 HTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITAL 240
+ +V S G L +G D N +WD G L H++ ++ L
Sbjct: 225 IICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCL 274
Score = 189 (71.6 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 61/265 (23%), Positives = 117/265 (44%)
Query: 57 QKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 116
++ L+GH I + +D +S S D L +WD + V++ A++
Sbjct: 4 RRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAP 63
Query: 117 DNRQIVSSSRDKTIKLWNTLA---HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDR 173
+ D +++ + + + GH+ ++SC RF ++Q II S+G D
Sbjct: 64 SGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQ--IITSSG-DT 120
Query: 174 MVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV- 232
+W++ + + +GH+G + +++++PDG SG D + LWD+ D T +
Sbjct: 121 TCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIG 180
Query: 233 HNDIITALCFSPNR-SFQKIKLDISRTL----QKSNLILYPINHGKMETPFFSLFRDVLS 287
H I A+ F PN +F D + L L++Y +H ++ + S
Sbjct: 181 HESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMY--SHD-------NIICGITS 231
Query: 288 VAFSVDNRQIVSSSRDKTIKLWNTL 312
VAFS R +++ D +W+ +
Sbjct: 232 VAFSRSGRLLLAGYDDFNCNIWDAM 256
Score = 162 (62.1 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 52/214 (24%), Positives = 96/214 (44%)
Query: 12 LNGHNGWVTQIATNPKFPDT--ILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISD 69
L GH G+++ +F D I++ S D T +W + G GHS +
Sbjct: 95 LPGHTGYLSCC----RFLDDNQIITSSGDTTCALWDIETGQQTVG-----FAGHSGDVMS 145
Query: 70 IVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKT 129
+ L+ DG +SG+ D +++LWD+ + F H D+ +VAF + + S D T
Sbjct: 146 LSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDAT 205
Query: 130 IKLWNTLAHCKFTIVE-DGHSDWVSCVRFSPNHQNPIIVSAGWDRM-VKVWNLTNCKLKI 187
+L++ A + + D ++ V FS + + ++ AG+D +W+
Sbjct: 206 CRLFDLRADQELLMYSHDNIICGITSVAFSRSGR---LLLAGYDDFNCNIWDAMKGDRAG 262
Query: 188 NHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWD 221
+GH ++ + V+ DG A+G D +W+
Sbjct: 263 VLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 296
Score = 161 (61.7 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 51/223 (22%), Positives = 95/223 (42%)
Query: 97 KTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVR 156
+T R H + ++ + D+R +VS+S+D + +W++ K + S WV
Sbjct: 2 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL-RSSWVMTCA 60
Query: 157 FSPNHQNPIIVSAGWDRMVKVWNLT----NCKLKINHSGHTGYLNTVTVSPDGSLCASGG 212
++P+ + G D + +++L N ++ GHTGYL+ D + S G
Sbjct: 61 YAPSGN--FVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSG 118
Query: 213 KDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPN-RSFQKIKLDISRTLQKSNLILYPIN 270
D LWD+ G+ H+ + +L +P+ R+F D S + L+ +
Sbjct: 119 -DTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDAS-------IKLWDVR 170
Query: 271 HGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA 313
F D+ +VAF + + S D T +L++ A
Sbjct: 171 DSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRA 213
Score = 64 (27.6 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 17/53 (32%), Positives = 23/53 (43%)
Query: 330 ELRPDVVSQSTKADPPMC--LSLAWSTDGQTLFAGYSDNTIRVWQVSVTSRGG 380
+LR D D +C S+A+S G+ L AGY D +W R G
Sbjct: 210 DLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAG 262
Score = 38 (18.4 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 347 CLSLAWSTDGQTLFAGYSDNTIRVW 371
CL + + DG + G D+ +++W
Sbjct: 273 CLGV--TDDGMAVATGSWDSFLKIW 295
>UNIPROTKB|Q8N0X2 [details] [associations]
symbol:SPAG16 "Sperm-associated antigen 16 protein"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086 EMBL:AF310672
EMBL:AF426740 EMBL:AF490390 EMBL:AK026377 EMBL:AK095036
EMBL:CR457359 EMBL:CR749477 EMBL:AL832962 EMBL:BC009614
EMBL:BC067756 EMBL:BC100282 IPI:IPI00166103 IPI:IPI00396021
IPI:IPI00470876 IPI:IPI00556122 IPI:IPI00556405
RefSeq:NP_001020607.1 RefSeq:NP_078808.3 UniGene:Hs.602792
ProteinModelPortal:Q8N0X2 SMR:Q8N0X2 IntAct:Q8N0X2 STRING:Q8N0X2
PhosphoSite:Q8N0X2 DMDM:146329993 PRIDE:Q8N0X2
Ensembl:ENST00000272898 Ensembl:ENST00000331683
Ensembl:ENST00000413312 Ensembl:ENST00000432529 GeneID:79582
KEGG:hsa:79582 UCSC:uc002veo.3 UCSC:uc002veq.3 UCSC:uc002ves.1
UCSC:uc010fuz.2 CTD:79582 GeneCards:GC02P214149 H-InvDB:HIX0021055
HGNC:HGNC:23225 HPA:HPA037542 MIM:612173 neXtProt:NX_Q8N0X2
PharmGKB:PA134887898 HOVERGEN:HBG086482 InParanoid:Q8N0X2
OMA:EGHNHAV OrthoDB:EOG41ZF9F PhylomeDB:Q8N0X2 GenomeRNAi:79582
NextBio:68570 ArrayExpress:Q8N0X2 Bgee:Q8N0X2 CleanEx:HS_SPAG16
Genevestigator:Q8N0X2 GermOnline:ENSG00000144451 Uniprot:Q8N0X2
Length = 631
Score = 225 (84.3 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 80/314 (25%), Positives = 139/314 (44%)
Query: 7 QLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLK----G 62
+L+ H V+ ++ P D ++SC D +WK+ G+P+ + G
Sbjct: 343 KLKNIFRLHELPVSCVSMQPH-KDILVSCGEDR---LWKVL------GLPKCNVLLTGFG 392
Query: 63 HSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 122
H+ ++SD G+ + S D T++LWDL G FE H++ V S + +
Sbjct: 393 HTDWLSDCCFHPSGDKLATSSGDTTVKLWDLCKGDCILTFEGHSRAVWSCTWHSCGNFVA 452
Query: 123 SSSRDKTIKLWNTLAH-CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT 181
SSS DKT K+W+ + C+ T+ GH+D V+ + F P N ++ S+ D+ + +W+
Sbjct: 453 SSSLDKTSKIWDVNSERCRCTLY--GHTDSVNSIEFFP-FSNTLLTSSA-DKTLSIWDAR 508
Query: 182 NCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALC 241
+ + GH +N P G + AS LWD + L +V DI
Sbjct: 509 TGICEQSLYGHMHSINDAIFDPRGHMIASCDACGVTKLWDF---RKLLPIVSIDIGP--- 562
Query: 242 FSPNRSFQKIKLDIS-RTLQKSN----LILYPINHGKMETPFFSLFRDVLSVAFSVDNRQ 296
SP ++ D S R L +++ + L + G++ + +V FS D
Sbjct: 563 -SPGN---EVNFDSSGRVLAQASGNGVIHLLDLKSGEIHK-LMGHENEAHTVVFSHDGEI 617
Query: 297 IVSSSRDKTIKLWN 310
+ S D T++ W+
Sbjct: 618 LFSGGSDGTVRTWS 631
Score = 66 (28.3 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 349 SLAWSTDGQTLFAGYSDNTIRVW 371
++ +S DG+ LF+G SD T+R W
Sbjct: 608 TVVFSHDGEILFSGGSDGTVRTW 630
>FB|FBgn0036354 [details] [associations]
symbol:Poc1 "Proteome of centrioles 1" species:7227
"Drosophila melanogaster" [GO:0051297 "centrosome organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GeneTree:ENSGT00700000104282 KO:K16482 EMBL:AY069349
RefSeq:NP_648640.1 UniGene:Dm.2164 ProteinModelPortal:Q9VU65
SMR:Q9VU65 STRING:Q9VU65 PaxDb:Q9VU65 PRIDE:Q9VU65
EnsemblMetazoa:FBtr0075863 GeneID:39502 KEGG:dme:Dmel_CG10191
UCSC:CG10191-RA CTD:39502 FlyBase:FBgn0036354 InParanoid:Q9VU65
OMA:PIYTLTG OrthoDB:EOG4DZ09Q PhylomeDB:Q9VU65 GenomeRNAi:39502
NextBio:813979 Bgee:Q9VU65 Uniprot:Q9VU65
Length = 391
Score = 228 (85.3 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 73/305 (23%), Positives = 142/305 (46%)
Query: 14 GHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLS 73
GH+G +TQ+ P I + S D+T+I+W L N R HS ++ + S
Sbjct: 16 GHSGGITQLRFGPDGAQ-IATSSTDSTVILWNL-----NQAARCIRFASHSAPVNGVAWS 69
Query: 74 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLW 133
GN S D+T+++W+ + F H+K V SV F ++++S DK+ K+W
Sbjct: 70 PKGNLVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKIW 129
Query: 134 NTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHT 193
+A +F ++WV +FSPN + ++ +A D+ V+++++ + + +
Sbjct: 130 R-VARRQFVSSFAQQNNWVRSAKFSPNGK--LVATASDDKSVRIYDVDSGECVRTFTEER 186
Query: 194 GYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHT-LVHNDIITALCFSPNRSFQKIK 252
+ P G++ A ++D++ + L +VH+ + + F P+ F
Sbjct: 187 AAPRQLAWHPWGNMLAVALGCNRIKIFDVSGSQLLQLYVVHSAPVNDVAFHPSGHFLLSG 246
Query: 253 LDISRTLQKSNLILYPINHGKMETPFFSL--FRDVLS-VAFSVDNRQIVSSSRDKTIKLW 309
D RT++ +L+ G+ P ++L D ++ VAFS D + + D+ + +W
Sbjct: 247 SD-DRTIRILDLL-----EGR---PIYTLTGHTDAVNAVAFSRDGDKFATGGSDRQLLVW 297
Query: 310 NTLAH 314
+ H
Sbjct: 298 QSNLH 302
Score = 205 (77.2 bits), Expect = 4.8e-14, P = 4.8e-14
Identities = 70/297 (23%), Positives = 135/297 (45%)
Query: 15 HNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSS 74
H+ V +A +PK + + S D T+ IW + GV + + HS + + S
Sbjct: 59 HSAPVNGVAWSPK-GNLVASAGHDRTVKIW----EPKLRGVSGEFV-AHSKAVRSVDFDS 112
Query: 75 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 134
G+ L+ S DK+ ++W +A + F V S FS + + + ++S DK++++++
Sbjct: 113 TGHLMLTASDDKSAKIWRVARRQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYD 172
Query: 135 T-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHT 193
C T E+ + + + P N + V+ G +R +K+++++ +L + H+
Sbjct: 173 VDSGECVRTFTEERAAP--RQLAWHP-WGNMLAVALGCNR-IKIFDVSGSQLLQLYVVHS 228
Query: 194 GYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRS-FQKI 251
+N V P G SG D + DL +G+ ++TL H D + A+ FS + F
Sbjct: 229 APVNDVAFHPSGHFLLSGSDDRTIRILDLLEGRPIYTLTGHTDAVNAVAFSRDGDKFATG 288
Query: 252 KLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKL 308
D + +SNL Y + + ++ S + V+ S S D +I++
Sbjct: 289 GSDRQLLVWQSNLHTYDASQFEAKSALASSSCESSGVSSKQSEGSSTSKSNDLSIRI 345
Score = 196 (74.1 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 60/259 (23%), Positives = 114/259 (44%)
Query: 57 QKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 116
++ GHS I+ + DG + S D T+ LW+L RF H+ V VA+S
Sbjct: 11 ERHFTGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQAARCIRFASHSAPVNGVAWSP 70
Query: 117 DNRQIVSSSRDKTIKLWNT-LAHCKFTIVEDGHSDWVSCVRF-SPNHQNPIIVSAGWDRM 174
+ S+ D+T+K+W L V HS V V F S H ++++A D+
Sbjct: 71 KGNLVASAGHDRTVKIWEPKLRGVSGEFV--AHSKAVRSVDFDSTGH---LMLTASDDKS 125
Query: 175 VKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHN 234
K+W + + + + ++ + SP+G L A+ D + ++D++ G+ + T
Sbjct: 126 AKIWRVARRQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDSGECVRTFTEE 185
Query: 235 DIITA-LCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVD 293
L + P + + L +R + ++ ++ ++ + V VAF
Sbjct: 186 RAAPRQLAWHPWGNMLAVALGCNR------IKIFDVSGSQLLQLYVVHSAPVNDVAFHPS 239
Query: 294 NRQIVSSSRDKTIKLWNTL 312
++S S D+TI++ + L
Sbjct: 240 GHFLLSGSDDRTIRILDLL 258
Score = 51 (23.0 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 349 SLAWSTDGQTLFAGYSDNTIRVWQ 372
++A+S DG G SD + VWQ
Sbjct: 275 AVAFSRDGDKFATGGSDRQLLVWQ 298
Score = 40 (19.1 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 350 LAWSTDGQTLFAGYSDNTIRV 370
+A+ G L +G D TIR+
Sbjct: 234 VAFHPSGHFLLSGSDDRTIRI 254
>UNIPROTKB|F1NYG1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0006470
"protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0042753 OMA:NAYLKPM GeneTree:ENSGT00690000101849
EMBL:AADN02046404 IPI:IPI00684527 Ensembl:ENSGALT00000033197
Uniprot:F1NYG1
Length = 605
Score = 247 (92.0 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 89/290 (30%), Positives = 133/290 (45%)
Query: 32 ILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLW 91
I+S RDNT+ IW D N ++ L GH+ + + L D ++GS D T+R+W
Sbjct: 316 IVSGLRDNTIKIW-----DKNTLECKRILTGHTGSV--LCLQYDERVIITGSSDSTVRVW 368
Query: 92 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTI--VEDGHS 149
D+ AG+ H + VL + F+ N +V+ S+D++I +W+ + T+ V GH
Sbjct: 369 DVNAGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHR 426
Query: 150 DWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCA 209
V+ V F + IVSA DR +KVWN + C+ +GH + + L
Sbjct: 427 AAVNVVDFDDKY----IVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD--RLVV 480
Query: 210 SGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQ-----KIKL-DISRTLQKS 262
SG D LWD+ G L L H +++ + F R KIK+ D+ L
Sbjct: 481 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPR 540
Query: 263 NLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTL 312
P + T R V + F D QIVSSS D TI +W+ L
Sbjct: 541 A----PAGTLCLRTLVEHSGR-VFRLQF--DEFQIVSSSHDDTILIWDFL 583
Score = 194 (73.4 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
Identities = 61/222 (27%), Positives = 109/222 (49%)
Query: 5 TLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHS 64
TL+ + L GH G V + + + I++ S D+T+ +W D N G L H
Sbjct: 332 TLECKRILTGHTGSVLCLQYDER---VIITGSSDSTVRVW-----DVNAGEMLNTLIHHC 383
Query: 65 HFISDIVLSSDGNYALSGSWDKTLRLWDLAAGK--TTRR-FEDHTKDVLSVAFSVDNRQI 121
+ + L + ++ S D+++ +WD+A+ T RR H V V F D++ I
Sbjct: 384 EAV--LHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYI 439
Query: 122 VSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT 181
VS+S D+TIK+WNT + C+F +GH ++C+++ ++ ++VS D +++W++
Sbjct: 440 VSASGDRTIKVWNT-STCEFVRTLNGHKRGIACLQY----RDRLVVSGSSDNTIRLWDIE 494
Query: 182 -NCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
L++ GH + + D SG D +WDL
Sbjct: 495 CGACLRVLE-GHEELVRCIRF--DNKRIVSGAYDGKIKVWDL 533
Score = 167 (63.8 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 60/193 (31%), Positives = 91/193 (47%)
Query: 1 MSTET-LQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKR 59
M++ T + LR L GH V + + K+ I+S S D T+ +W + + +
Sbjct: 410 MASPTDITLRRVLVGHRAAVNVVDFDDKY---IVSASGDRTIKVWNTSTCEF-----VRT 461
Query: 60 LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 119
L GH I+ L +SGS D T+RLWD+ G R E H + V + F DN+
Sbjct: 462 LNGHKRGIA--CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNK 517
Query: 120 QIVSSSRDKTIKLWNTLAH----------CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSA 169
+IVS + D IK+W+ +A C T+VE HS V ++F Q IVS+
Sbjct: 518 RIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVE--HSGRVFRLQFD-EFQ---IVSS 571
Query: 170 GWDRMVKVWNLTN 182
D + +W+ N
Sbjct: 572 SHDDTILIWDFLN 584
Score = 163 (62.4 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 65/247 (26%), Positives = 113/247 (45%)
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
L D +SG D T+++WD + R HT VL + + D R I++ S D T++
Sbjct: 309 LQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVR 366
Query: 132 LWNTLA-HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL---TNCKLKI 187
+W+ A T++ H + V +RF+ N ++V+ DR + VW++ T+ L+
Sbjct: 367 VWDVNAGEMLNTLIH--HCEAVLHLRFN----NGMMVTCSKDRSIAVWDMASPTDITLRR 420
Query: 188 NHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNR 246
GH +N V + ASG D +W+ + + + TL H I L +
Sbjct: 421 VLVGHRAAVNVVDFDDKYIVSASG--DRTIKVWNTSTCEFVRTLNGHKRGIACLQY---- 474
Query: 247 SFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTI 306
+ +L +S + + + L+ I G V + F DN++IVS + D I
Sbjct: 475 ---RDRLVVSGS-SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKI 528
Query: 307 KLWNTLA 313
K+W+ +A
Sbjct: 529 KVWDLVA 535
Score = 37 (18.1 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 355 DGQTLFAGYSDNTIRVWQV 373
D + + +G D I+VW +
Sbjct: 515 DNKRIVSGAYDGKIKVWDL 533
>TAIR|locus:2060560 [details] [associations]
symbol:LIS "AT2G41500" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS;RCA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0007267
"cell-cell signaling" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007267 GO:GO:0005681
EMBL:AC002510 GO:GO:0000398 GO:GO:0001709 EMBL:AC004625
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 EMBL:BT008700 EMBL:BT020589 EMBL:AK229530
IPI:IPI00545392 PIR:T00806 RefSeq:NP_181681.1 UniGene:At.12395
UniGene:At.42825 ProteinModelPortal:O22212 SMR:O22212 STRING:O22212
PaxDb:O22212 PRIDE:O22212 EnsemblPlants:AT2G41500.1 GeneID:818748
KEGG:ath:AT2G41500 GeneFarm:4669 TAIR:At2g41500
HOGENOM:HOG000157615 InParanoid:O22212 KO:K12662 OMA:CIATVSH
PhylomeDB:O22212 ProtClustDB:CLSN2683778 Genevestigator:O22212
GermOnline:AT2G41500 GO:GO:0009560 Uniprot:O22212
Length = 554
Score = 246 (91.7 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 71/281 (25%), Positives = 128/281 (45%)
Query: 32 ILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLW 91
+ +CS +W++ + V LK H +D+V S + + S D+T +LW
Sbjct: 270 LATCSLSGVTKLWEMPQVTNTIAV----LKDHKERATDVVFSPVDDCLATASADRTAKLW 325
Query: 92 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDW 151
G + FE H + VAF + + ++S DKT +LW+ + ++++GHS
Sbjct: 326 K-TDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAEL-LLQEGHSRS 383
Query: 152 VSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASG 211
V + F + + S G D + +VW+L + + GH + +V SP+G ASG
Sbjct: 384 VYGIAFQQD--GALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASG 441
Query: 212 GKDMNAMLWDLNDGKHLHTL-VHNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPIN 270
G+D +WDL K L+ + H ++++ + + P + L + K N+ +
Sbjct: 442 GEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYF---LATASYDMKVNI--WSGR 496
Query: 271 HGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNT 311
+ V S+ + D+ I + S D+TIKLW +
Sbjct: 497 DFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLWTS 537
Score = 220 (82.5 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 57/210 (27%), Positives = 95/210 (45%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
T GH + ++A +P + + S D T +W D N G +GHS + I
Sbjct: 334 TFEGHLDRLARVAFHPS-GKYLGTTSYDKTWRLW-----DINTGAELLLQEGHSRSVYGI 387
Query: 71 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 130
DG A S D R+WDL G++ F+ H K V SV FS + + S D
Sbjct: 388 AFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQC 447
Query: 131 KLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS 190
++W+ L K + H++ VS V++ P + + +A +D V +W+ + L + +
Sbjct: 448 RIWD-LRMRKSLYIIPAHANLVSQVKYEPQ-EGYFLATASYDMKVNIWSGRDFSLVKSLA 505
Query: 191 GHTGYLNTVTVSPDGSLCASGGKDMNAMLW 220
GH + ++ ++ D S A+ D LW
Sbjct: 506 GHESKVASLDITADSSCIATVSHDRTIKLW 535
Score = 215 (80.7 bits), Expect = 8.4e-15, P = 8.4e-15
Identities = 63/238 (26%), Positives = 101/238 (42%)
Query: 12 LNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV 71
L H T + +P D + + S D T +WK T+ G + +GH ++ +
Sbjct: 294 LKDHKERATDVVFSP-VDDCLATASADRTAKLWK-----TD-GTLLQTFEGHLDRLARVA 346
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
G Y + S+DKT RLWD+ G E H++ V +AF D S D +
Sbjct: 347 FHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLAR 406
Query: 132 LWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSG 191
+W+ L + +V GH V V FSPN + + S G D ++W+L K
Sbjct: 407 VWD-LRTGRSILVFQGHIKPVFSVNFSPNGYH--LASGGEDNQCRIWDLRMRKSLYIIPA 463
Query: 192 HTGYLNTVTVSP-DGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRS 247
H ++ V P +G A+ DM +W D + +L H + +L + + S
Sbjct: 464 HANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSS 521
Score = 128 (50.1 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 48/200 (24%), Positives = 78/200 (39%)
Query: 113 AFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWD 172
+FS D + + + S KLW V H + + V FSP + + +A D
Sbjct: 262 SFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSP--VDDCLATASAD 319
Query: 173 RMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV 232
R K+W T+ L GH L V P G + D LWD+N G L
Sbjct: 320 RTAKLWK-TDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQE 378
Query: 233 -HNDIITALCFSPNRSFQ-KIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAF 290
H+ + + F + + LD +L + ++ + G+ F + V SV F
Sbjct: 379 GHSRSVYGIAFQQDGALAASCGLD---SLAR----VWDLRTGRSILVFQGHIKPVFSVNF 431
Query: 291 SVDNRQIVSSSRDKTIKLWN 310
S + + S D ++W+
Sbjct: 432 SPNGYHLASGGEDNQCRIWD 451
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 237 (88.5 bits), Expect = 6.2e-17, P = 6.2e-17
Identities = 66/212 (31%), Positives = 101/212 (47%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
T GH+G V + +P +LSCS D T +W + +T + KGH+ + D+
Sbjct: 674 TFLGHSGPVYGCSFSPD-SQYLLSCSEDTTARLWSM---ETMSNLVC--YKGHNFPVWDV 727
Query: 71 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 130
S G Y + S D+T RLW R F H D +V F + + + S DK+
Sbjct: 728 SFSPFGFYFATASHDRTARLWTTNHISPLRIFTGHLSDCNTVRFHPNINYLATGSNDKSA 787
Query: 131 KLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS 190
+LW + K + GH + V FSP+ + ++ +AG D V +W+L+ K
Sbjct: 788 RLWE-IQTGKCVRIFMGHRAPIYTVAFSPDGR--LLATAGEDTSVILWDLSTGKKVKKMD 844
Query: 191 GHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
GHT + ++ S DGS+ ASG D LWD+
Sbjct: 845 GHTKCVYSLDFSCDGSILASGSSDCTVRLWDV 876
Score = 230 (86.0 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 59/187 (31%), Positives = 86/187 (45%)
Query: 58 KRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 117
K GHS + S D Y LS S D T RLW + ++ H V V+FS
Sbjct: 673 KTFLGHSGPVYGCSFSPDSQYLLSCSEDTTARLWSMETMSNLVCYKGHNFPVWDVSFSPF 732
Query: 118 NRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKV 177
++S D+T +LW T H + GH + VRF PN + + D+ ++
Sbjct: 733 GFYFATASHDRTARLWTT-NHISPLRIFTGHLSDCNTVRFHPNIN--YLATGSNDKSARL 789
Query: 178 WNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDI 236
W + K GH + TV SPDG L A+ G+D + +LWDL+ GK + + H
Sbjct: 790 WEIQTGKCVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKVKKMDGHTKC 849
Query: 237 ITALCFS 243
+ +L FS
Sbjct: 850 VYSLDFS 856
Score = 205 (77.2 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 66/241 (27%), Positives = 112/241 (46%)
Query: 73 SSDGNYAL-SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
S+ N L SGS + +L + F H+ V +FS D++ ++S S D T +
Sbjct: 645 STTANNNLNSGSSSSSNKLQKQQKESEFKTFLGHSGPVYGCSFSPDSQYLLSCSEDTTAR 704
Query: 132 LWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCK-LKINHS 190
LW+ + + GH+ V V FSP +A DR ++W + L+I +
Sbjct: 705 LWS-METMSNLVCYKGHNFPVWDVSFSPF--GFYFATASHDRTARLWTTNHISPLRI-FT 760
Query: 191 GHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQ 249
GH NTV P+ + A+G D +A LW++ GK + + H I + FSP+
Sbjct: 761 GHLSDCNTVRFHPNINYLATGSNDKSARLWEIQTGKCVRIFMGHRAPIYTVAFSPDGRL- 819
Query: 250 KIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLW 309
++ + +++IL+ ++ GK + V S+ FS D + S S D T++LW
Sbjct: 820 -----LATAGEDTSVILWDLSTGKKVKKMDGHTKCVYSLDFSCDGSILASGSSDCTVRLW 874
Query: 310 N 310
+
Sbjct: 875 D 875
Score = 193 (73.0 bits), Expect = 6.3e-12, P = 6.3e-12
Identities = 54/179 (30%), Positives = 86/179 (48%)
Query: 2 STETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLK 61
S ET+ GHN V ++ +P F + S D T +W TN+ P +
Sbjct: 707 SMETMSNLVCYKGHNFPVWDVSFSP-FGFYFATASHDRTARLWT-----TNHISPLRIFT 760
Query: 62 GHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 121
GH + + + NY +GS DK+ RLW++ GK R F H + +VAFS D R +
Sbjct: 761 GHLSDCNTVRFHPNINYLATGSNDKSARLWEIQTGKCVRIFMGHRAPIYTVAFSPDGRLL 820
Query: 122 VSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL 180
++ D ++ LW+ L+ K DGH+ V + FS + I+ S D V++W++
Sbjct: 821 ATAGEDTSVILWD-LSTGKKVKKMDGHTKCVYSLDFSCD--GSILASGSSDCTVRLWDV 876
Score = 141 (54.7 bits), Expect = 2.3e-08, Sum P(3) = 2.3e-08
Identities = 53/210 (25%), Positives = 85/210 (40%)
Query: 118 NRQIVSSSRDKTIKLWNTLAHCKF-TIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVK 176
N + S S + KL +F T + GHS V FSP+ Q ++S D +
Sbjct: 649 NNNLNSGSSSSSNKLQKQQKESEFKTFL--GHSGPVYGCSFSPDSQ--YLLSCSEDTTAR 704
Query: 177 VWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HND 235
+W++ + + GH + V+ SP G A+ D A LW N L H
Sbjct: 705 LWSMETMSNLVCYKGHNFPVWDVSFSPFGFYFATASHDRTARLWTTNHISPLRIFTGHLS 764
Query: 236 IITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNR 295
+ F PN ++ ++ + L+ I GK F + +VAFS D R
Sbjct: 765 DCNTVRFHPNINY------LATGSNDKSARLWEIQTGKCVRIFMGHRAPIYTVAFSPDGR 818
Query: 296 QIVSSSRDKTIKLWNTLAHCKFTIVDLETK 325
+ ++ D ++ LW+ K +D TK
Sbjct: 819 LLATAGEDTSVILWDLSTGKKVKKMDGHTK 848
Score = 65 (27.9 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 347 CL-SLAWSTDGQTLFAGYSDNTIRVWQV 373
C+ SL +S DG L +G SD T+R+W V
Sbjct: 849 CVYSLDFSCDGSILASGSSDCTVRLWDV 876
Score = 42 (19.8 bits), Expect = 2.3e-08, Sum P(3) = 2.3e-08
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTR 100
+S D G D ++++W+L K R
Sbjct: 566 ISKDAQLVAGGFSDSSVKIWNLKEMKEQR 594
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 246 (91.7 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 75/257 (29%), Positives = 115/257 (44%)
Query: 49 DDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKD 108
++ N G K L+GH + +D + LS S D ++R WDL + T ++ H
Sbjct: 327 EEDNTGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYP 386
Query: 109 VLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVS 168
V V S + S S D+T +LW+ I GH V CV+F PN + +
Sbjct: 387 VWDVDISPFSLYFASGSHDRTARLWSFDRTYPLRIYA-GHLADVDCVKFHPNSN--YLAT 443
Query: 169 AGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHL 228
D+ V++W+ +GH G + +++ SP+G AS G+D LWDL G
Sbjct: 444 GSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLF 503
Query: 229 HTLV-HNDIITALCFSPNRSF-QKIKLDIS-RTLQ-KSNLILYPIN--HGKMETPFFSLF 282
L H D IT+L FSP+ +D S R +S P + G++ +
Sbjct: 504 KELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDIRSTCCNTPADGSSGELVGVYTGQM 563
Query: 283 RDVLSVAFSVDNRQIVS 299
+VLSV F N +V+
Sbjct: 564 SNVLSVQFMACNLLLVT 580
Score = 244 (91.0 bits), Expect = 3.9e-18, P = 3.9e-18
Identities = 62/191 (32%), Positives = 95/191 (49%)
Query: 32 ILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLW 91
+LSCS D ++ W L TN + Q GH++ + D+ +S Y SGS D+T RLW
Sbjct: 357 LLSCSEDMSIRYWDLG-SFTNTVLYQ----GHAYPVWDVDISPFSLYFASGSHDRTARLW 411
Query: 92 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDW 151
R + H DV V F ++ + + S DKT++LW+ + GH
Sbjct: 412 SFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFT-GHRGP 470
Query: 152 VSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASG 211
V + FSPN + + SAG D+ +K+W+L + L GHT + ++ SPD L AS
Sbjct: 471 VLSLSFSPNGK--YLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIASA 528
Query: 212 GKDMNAMLWDL 222
D + +WD+
Sbjct: 529 SMDNSVRVWDI 539
Score = 219 (82.2 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 56/183 (30%), Positives = 89/183 (48%)
Query: 14 GHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLS 73
GH V + +P F S S D T +W D Y P + GH + +
Sbjct: 382 GHAYPVWDVDISP-FSLYFASGSHDRTARLWSF---DRTY--PLRIYAGHLADVDCVKFH 435
Query: 74 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLW 133
+ NY +GS DKT+RLW G + R F H VLS++FS + + + S+ D+ +KLW
Sbjct: 436 PNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLW 495
Query: 134 NTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHT 193
+ + F + GH+D ++ + FSP+ + +I SA D V+VW++ + G +
Sbjct: 496 DLASGTLFKELR-GHTDSITSLAFSPD--SGLIASASMDNSVRVWDIRSTCCNTPADGSS 552
Query: 194 GYL 196
G L
Sbjct: 553 GEL 555
Score = 192 (72.6 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 68/280 (24%), Positives = 118/280 (42%)
Query: 53 YGVPQKRLKGHSHFI--SDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVL 110
+ + K+LK H + S I L+ D D T G + H V
Sbjct: 295 WSLRSKKLKSEPHHVDTSRIRLACDTLEEEENEEDNT--------GTEMKILRGHCGPVY 346
Query: 111 SVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAG 170
S F D+ ++S S D +I+ W+ L T++ GH+ V V SP + S
Sbjct: 347 STRFLADSSGLLSCSEDMSIRYWD-LGSFTNTVLYQGHAYPVWDVDISPF--SLYFASGS 403
Query: 171 WDRMVKVWNLTNC-KLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLH 229
DR ++W+ L+I ++GH ++ V P+ + A+G D LW G +
Sbjct: 404 HDRTARLWSFDRTYPLRI-YAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVR 462
Query: 230 TLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSV 288
H + +L FSPN + ++ + L L+ + G + + S+
Sbjct: 463 LFTGHRGPVLSLSFSPNGKY------LASAGEDQRLKLWDLASGTLFKELRGHTDSITSL 516
Query: 289 AFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMV 328
AFS D+ I S+S D ++++W+ + C T D + ++V
Sbjct: 517 AFSPDSGLIASASMDNSVRVWDIRSTCCNTPADGSSGELV 556
Score = 110 (43.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 43/178 (24%), Positives = 71/178 (39%)
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
+SSD +G + ++LW L + K + E H D + + D + + D
Sbjct: 276 ISSDSKLLAAGFDNSCIKLWSLRSKKL--KSEPHHVDTSRIRLACDTLEEEENEED---- 329
Query: 132 LWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSG 191
NT K I+ GH V RF + ++S D ++ W+L + + + G
Sbjct: 330 --NTGTEMK--ILR-GHCGPVYSTRFLADSSG--LLSCSEDMSIRYWDLGSFTNTVLYQG 382
Query: 192 HTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSF 248
H + V +SP ASG D A LW + L H + + F PN ++
Sbjct: 383 HAYPVWDVDISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNY 440
Score = 58 (25.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 349 SLAWSTDGQTLFAGYSDNTIRVWQVSVT 376
SLA+S D + + DN++RVW + T
Sbjct: 515 SLAFSPDSGLIASASMDNSVRVWDIRST 542
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 244 (91.0 bits), Expect = 2.4e-18, P = 2.4e-18
Identities = 55/156 (35%), Positives = 90/156 (57%)
Query: 23 ATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSG 82
A P ++++SCS DNTL +W R++ N V +R+ GH + ++D+ S D S
Sbjct: 339 AVCPDEVESLVSCSDDNTLYLW---RNNQNKCV--ERMTGHQNVVNDVKYSPDVKLIASA 393
Query: 83 SWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFT 142
S+DK++RLW + G+ F H + V +VA+S D+R IVS S+D T+K+W+ K
Sbjct: 394 SFDKSVRLWRASDGQYMATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTK-KLA 452
Query: 143 IVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVW 178
GH+D V V ++P+ + S G D+++K+W
Sbjct: 453 QELPGHADEVFGVDWAPDGSR--VASGGKDKVIKLW 486
Score = 225 (84.3 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 87/339 (25%), Positives = 146/339 (43%)
Query: 1 MSTETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKR- 59
++TET T GH WV ++ P C + ++IIW D G + R
Sbjct: 148 LNTETPHF--TCTGHKQWVLCVSWAPDGKRLASGC-KAGSIIIW-----DPETGQQKGRP 199
Query: 60 LKGHSHFISDIVLSS-----DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 114
L GH I+ + + S S D R+WD+ G+ HT V +V +
Sbjct: 200 LSGHKKHINCLAWEPYHRDPECRKLASASGDGDCRIWDVKLGQCLMNIAGHTNAVTAVRW 259
Query: 115 SVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRM 174
I +SS+D+T+K+W A GH+ WV+ + S ++ ++ G
Sbjct: 260 GGAGL-IYTSSKDRTVKMWRA-ADGILCRTFSGHAHWVNNIALSTDY----VLRTGPFHP 313
Query: 175 VKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAM-LWDLNDGKHLHTLV- 232
VK + ++ L + V PD D N + LW N K + +
Sbjct: 314 VKDRSKSHLSLSTEELQESALKRYQAVCPDEVESLVSCSDDNTLYLWRNNQNKCVERMTG 373
Query: 233 HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSV 292
H +++ + +SP+ +KL S + KS + L+ + G+ F + V +VA+S
Sbjct: 374 HQNVVNDVKYSPD-----VKLIASASFDKS-VRLWRASDGQYMATFRGHVQAVYTVAWSA 427
Query: 293 DNRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEEL 331
D+R IVS S+D T+K+W+ ++TKK+ +EL
Sbjct: 428 DSRLIVSGSKDSTLKVWS-----------VQTKKLAQEL 455
Score = 191 (72.3 bits), Expect = 4.6e-15, Sum P(2) = 4.6e-15
Identities = 80/329 (24%), Positives = 140/329 (42%)
Query: 60 LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 119
+ GH+ + + S DG + SGS D T+RLWDL H + VL V+++ D +
Sbjct: 115 MPGHAEAVVSLNFSPDGAHLASGSGDTTVRLWDLNTETPHFTCTGHKQWVLCVSWAPDGK 174
Query: 120 QIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPI---IVSAGWDRMVK 176
++ S + +I +W+ + GH ++C+ + P H++P + SA D +
Sbjct: 175 RLASGCKAGSIIIWDPETGQQKGRPLSGHKKHINCLAWEPYHRDPECRKLASASGDGDCR 234
Query: 177 VWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HND 235
+W++ + +N +GHT + V G + S KD +W DG T H
Sbjct: 235 IWDVKLGQCLMNIAGHTNAVTAVRWGGAGLIYTSS-KDRTVKMWRAADGILCRTFSGHAH 293
Query: 236 IITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNR 295
+ + S + + + KS+L L + +++ ++ V V++
Sbjct: 294 WVNNIALSTDYVLRTGPFHPVKDRSKSHLSL---STEELQESALKRYQAVCPD--EVES- 347
Query: 296 QIVSSSRDKTIKLW-NTLAHCKFTIVDLETKKMVEELRPDV-VSQSTKADPPMCLSLAW- 352
+VS S D T+ LW N C + + + PDV + S D + L W
Sbjct: 348 -LVSCSDDNTLYLWRNNQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRL---WR 403
Query: 353 STDGQTL--FAGYSDNTIRV-WQVSVTSR 378
++DGQ + F G+ V W S SR
Sbjct: 404 ASDGQYMATFRGHVQAVYTVAW--SADSR 430
Score = 187 (70.9 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 61/237 (25%), Positives = 106/237 (44%)
Query: 14 GHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLS 73
GH VT + I + S+D T+ +W+ D G+ + GH+H++++I LS
Sbjct: 249 GHTNAVTAVRWGGA--GLIYTSSKDRTVKMWRAA--D---GILCRTFSGHAHWVNNIALS 301
Query: 74 SDGNYAL-SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKL 132
+D Y L +G + +T ++ + +VS S D T+ L
Sbjct: 302 TD--YVLRTGPFHPVKDRSKSHLSLSTEELQESALKRYQAVCPDEVESLVSCSDDNTLYL 359
Query: 133 W-NTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSG 191
W N C + GH + V+ V++SP+ + +I SA +D+ V++W ++ + G
Sbjct: 360 WRNNQNKCVERMT--GHQNVVNDVKYSPDVK--LIASASFDKSVRLWRASDGQYMATFRG 415
Query: 192 HTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRS 247
H + TV S D L SG KD +W + K L H D + + ++P+ S
Sbjct: 416 HVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTKKLAQELPGHADEVFGVDWAPDGS 472
Score = 152 (58.6 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 51/201 (25%), Positives = 89/201 (44%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
++ GH V + +P + S S D T+ +W D N P GH ++ +
Sbjct: 114 SMPGHAEAVVSLNFSPDGAH-LASGSGDTTVRLW-----DLNTETPHFTCTGHKQWVLCV 167
Query: 71 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRR-FEDHTKDVLSVAFSV-----DNRQIVSS 124
+ DG SG ++ +WD G+ R H K + +A+ + R++ S+
Sbjct: 168 SWAPDGKRLASGCKAGSIIIWDPETGQQKGRPLSGHKKHINCLAWEPYHRDPECRKLASA 227
Query: 125 SRDKTIKLWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNC 183
S D ++W+ L C I GH++ V+ VR+ +I ++ DR VK+W +
Sbjct: 228 SGDGDCRIWDVKLGQCLMNIA--GHTNAVTAVRWGGAG---LIYTSSKDRTVKMWRAADG 282
Query: 184 KLKINHSGHTGYLNTVTVSPD 204
L SGH ++N + +S D
Sbjct: 283 ILCRTFSGHAHWVNNIALSTD 303
Score = 134 (52.2 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 41/152 (26%), Positives = 69/152 (45%)
Query: 97 KTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCK-FTIVEDGHSDWVSCV 155
+ T H + V+S+ FS D + S S D T++LW+ FT GH WV CV
Sbjct: 110 RCTSSMPGHAEAVVSLNFSPDGAHLASGSGDTTVRLWDLNTETPHFTCT--GHKQWVLCV 167
Query: 156 RFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINH-SGHTGYLNTVTVSP---DGSL--CA 209
++P+ + + S + +W+ + K SGH ++N + P D A
Sbjct: 168 SWAPDGKR--LASGCKAGSIIIWDPETGQQKGRPLSGHKKHINCLAWEPYHRDPECRKLA 225
Query: 210 SGGKDMNAMLWDLNDGKHLHTLV-HNDIITAL 240
S D + +WD+ G+ L + H + +TA+
Sbjct: 226 SASGDGDCRIWDVKLGQCLMNIAGHTNAVTAV 257
Score = 68 (29.0 bits), Expect = 4.6e-15, Sum P(2) = 4.6e-15
Identities = 10/25 (40%), Positives = 18/25 (72%)
Query: 349 SLAWSTDGQTLFAGYSDNTIRVWQV 373
++AWS D + + +G D+T++VW V
Sbjct: 422 TVAWSADSRLIVSGSKDSTLKVWSV 446
Score = 53 (23.7 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 14/50 (28%), Positives = 24/50 (48%)
Query: 322 LETKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVW 371
++TKK+ +EL P + D W+ DG + +G D I++W
Sbjct: 446 VQTKKLAQEL-PGHADEVFGVD--------WAPDGSRVASGGKDKVIKLW 486
>SGD|S000001308 [details] [associations]
symbol:MET30 "F-box protein containing five copies of the
WD40 motif" species:4932 "Saccharomyces cerevisiae" [GO:0008652
"cellular amino acid biosynthetic process" evidence=IEA]
[GO:0019344 "cysteine biosynthetic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IGI;IPI] [GO:0000209 "protein polyubiquitination"
evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0009086
"methionine biosynthetic process" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0043224 "nuclear SCF ubiquitin ligase
complex" evidence=IDA] [GO:0046685 "response to arsenic-containing
substance" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IDA] [GO:0000114 "regulation of transcription involved in
G1 phase of mitotic cell cycle" evidence=IMP] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IMP] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IMP] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 SGD:S000001308 GO:GO:0005737
GO:GO:0046686 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046685 GO:GO:0000082 EMBL:BK006942
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
SUPFAM:SSF81383 EMBL:Z46861 GO:GO:0000114 GO:GO:0009086
GO:GO:0000209 GO:GO:0019344 GO:GO:0043130 GO:GO:0031146
GO:GO:0000087 GO:GO:0043224 GO:GO:0030174
GeneTree:ENSGT00690000101849 EMBL:L26505 PIR:S49932
RefSeq:NP_012218.1 ProteinModelPortal:P39014 SMR:P39014
DIP:DIP-1439N IntAct:P39014 MINT:MINT-385167 STRING:P39014
PaxDb:P39014 PeptideAtlas:P39014 EnsemblFungi:YIL046W GeneID:854765
KEGG:sce:YIL046W CYGD:YIL046w HOGENOM:HOG000166480 KO:K10259
OMA:ILCYLDT OrthoDB:EOG496313 NextBio:977517 Genevestigator:P39014
GermOnline:YIL046W Uniprot:P39014
Length = 640
Score = 246 (91.7 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 84/322 (26%), Positives = 143/322 (44%)
Query: 36 SRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAA 95
S D+T+ IW L G +RL GHS + + D ++GS DKT+R+W+
Sbjct: 319 SYDSTIGIWDLFT-----GKLIRRLSGHSDGVKTLYF--DDRKLITGSLDKTIRVWNYIT 371
Query: 96 GKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCV 155
G+ + H+ VLSV + IVS S DKT+K+W+ + +T+ GH++WV+CV
Sbjct: 372 GECISTYRGHSDSVLSV--DSYQKVIVSGSADKTVKVWHVESRTCYTL--RGHTEWVNCV 427
Query: 156 RFSPNHQNPIIVSAGWDRMVKVWNL-TNCKLKINHSGHTGYLNTV---TVSPDGSLCASG 211
+ P + S D +++W++ TN LK+ GH G + + T+ +L
Sbjct: 428 KLHPKSFS--CFSCSDDTTIRMWDIRTNSCLKV-FRGHVGQVQKIIPLTIKDVENLATDN 484
Query: 212 GKDMNAMLWD--LNDGKHLHTLVHNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPI 269
D ++ D + DG N+ T L + + + T++ L+ +
Sbjct: 485 TSDGSSPQDDPTMTDGADESDTPSNEQETVLDENIPYPTHLLSCGLDNTIK-----LWDV 539
Query: 270 NHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA-HCKFTIVDLETKKMV 328
GK F V +A DN +I+S S D +IK+W+ + C T ++
Sbjct: 540 KTGKCIRTQFGHVEGVWDIA--ADNFRIISGSHDGSIKVWDLQSGKCMHTFNGRRLQRET 597
Query: 329 EELRPDVVSQSTKADPPMCLSL 350
+ + S K P C+ +
Sbjct: 598 QHTQTQ--SLGDKVAPIACVCI 617
Score = 230 (86.0 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 60/168 (35%), Positives = 90/168 (53%)
Query: 58 KRLKGHSHFISDIVLSSDGNYAL--SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 115
+ KGH D VL+ NY L +GS+D T+ +WDL GK RR H+ V ++ F
Sbjct: 296 QEFKGHM----DGVLTLQFNYRLLFTGSYDSTIGIWDLFTGKLIRRLSGHSDGVKTLYF- 350
Query: 116 VDNRQIVSSSRDKTIKLWNTLA-HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRM 174
D+R++++ S DKTI++WN + C T GHSD V V ++Q +IVS D+
Sbjct: 351 -DDRKLITGSLDKTIRVWNYITGECISTY--RGHSDSVLSV---DSYQK-VIVSGSADKT 403
Query: 175 VKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
VKVW++ + + GHT ++N V + P C S D +WD+
Sbjct: 404 VKVWHVES-RTCYTLRGHTEWVNCVKLHPKSFSCFSCSDDTTIRMWDI 450
Score = 144 (55.7 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 55/224 (24%), Positives = 93/224 (41%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
T GH+ V + + K I+S S D T+ +W + T Y L+GH+ +++ +
Sbjct: 377 TYRGHSDSVLSVDSYQK---VIVSGSADKTVKVWHV-ESRTCY-----TLRGHTEWVNCV 427
Query: 71 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 130
L S S D T+R+WD+ + F H V + + + + + + D T
Sbjct: 428 KLHPKSFSCFSCSDDTTIRMWDIRTNSCLKVFRGHVGQVQKI-IPLTIKDVENLATDNTS 486
Query: 131 KLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQN-PI---IVSAGWDRMVKVWNLTNCKLK 186
+ T D SD S + + +N P ++S G D +K+W++ K
Sbjct: 487 DGSSPQDDPTMTDGAD-ESDTPSNEQETVLDENIPYPTHLLSCGLDNTIKLWDVKTGKCI 545
Query: 187 INHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHT 230
GH ++ D SG D + +WDL GK +HT
Sbjct: 546 RTQFGHVE--GVWDIAADNFRIISGSHDGSIKVWDLQSGKCMHT 587
Score = 40 (19.1 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 360 FAGYSDNTIRVWQVSVTS 377
F+ D TIR+W + S
Sbjct: 437 FSCSDDTTIRMWDIRTNS 454
Score = 39 (18.8 bits), Expect = 2.7e-16, Sum P(2) = 2.7e-16
Identities = 6/9 (66%), Positives = 8/9 (88%)
Query: 365 DNTIRVWQV 373
DNTI++W V
Sbjct: 531 DNTIKLWDV 539
Score = 38 (18.4 bits), Expect = 3.5e-16, Sum P(2) = 3.5e-16
Identities = 6/21 (28%), Positives = 12/21 (57%)
Query: 353 STDGQTLFAGYSDNTIRVWQV 373
+ D + +G D +I+VW +
Sbjct: 559 AADNFRIISGSHDGSIKVWDL 579
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 247 (92.0 bits), Expect = 3.0e-18, P = 3.0e-18
Identities = 71/240 (29%), Positives = 108/240 (45%)
Query: 1 MSTETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRL 60
M +T L GH+G V + +P + +LSCS D T+ +W L G
Sbjct: 508 MDEKTASELKILYGHSGPVYGTSFSPD-RNYLLSCSEDGTVRLWSLQTFTCLVGY----- 561
Query: 61 KGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ 120
KGH++ + D S G Y +SG D+ RLW + R F H DV F ++
Sbjct: 562 KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNY 621
Query: 121 IVSSSRDKTIKLWNTL-AHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
I + S D+T++LW+ L +C + GH + + FSPN + + + D V +W+
Sbjct: 622 IATGSADRTVRLWDVLNGNC--VRIFTGHKGPIHSLAFSPNGR--FLATGATDGRVLLWD 677
Query: 180 LTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITA 239
+ + + GHT + + S DG + ASG D LWD K L +D TA
Sbjct: 678 IGHGLMVGELKGHTDTIYALRFSRDGEILASGSMDNTVRLWDAV--KAFEDLETDDFTTA 735
Score = 209 (78.6 bits), Expect = 7.5e-14, P = 7.5e-14
Identities = 64/238 (26%), Positives = 104/238 (43%)
Query: 89 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGH 148
R+ D + H+ V +FS D ++S S D T++LW+ L + GH
Sbjct: 506 RIMDEKTASELKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWS-LQTFTCLVGYKGH 564
Query: 149 SDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCK-LKINHSGHTGYLNTVTVSPDGSL 207
+ V +FSP VS G DR+ ++W + + L+I +GH + P+ +
Sbjct: 565 NYPVWDTQFSP--YGYYFVSGGHDRVARLWATDHYQPLRI-FAGHLADVTCTRFHPNSNY 621
Query: 208 CASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLIL 266
A+G D LWD+ +G + H I +L FSPN F ++ ++L
Sbjct: 622 IATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRF------LATGATDGRVLL 675
Query: 267 YPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLET 324
+ I HG M + ++ FS D + S S D T++LW+ + DLET
Sbjct: 676 WDIGHGLMVGELKGHTDTIYALRFSRDGEILASGSMDNTVRLWDAVK----AFEDLET 729
Score = 118 (46.6 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 44/183 (24%), Positives = 75/183 (40%)
Query: 67 ISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSR 126
++ + ++ D + + G D T+R+W + K + SV + D I S
Sbjct: 453 LTAVDITDDSSMIVGGFADSTVRVWSVTP-----------KKLRSVKAAADLSLIDKESD 501
Query: 127 DKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLK 186
D ++ + + I+ GHS V FSP+ ++S D V++W+L
Sbjct: 502 DVLERIMDEKTASELKILY-GHSGPVYGTSFSPDRN--YLLSCSEDGTVRLWSLQTFTCL 558
Query: 187 INHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPN 245
+ + GH + SP G SGG D A LW + + L H +T F PN
Sbjct: 559 VGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPN 618
Query: 246 RSF 248
++
Sbjct: 619 SNY 621
Score = 64 (27.6 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 349 SLAWSTDGQTLFAGYSDNTIRVW 371
+L +S DG+ L +G DNT+R+W
Sbjct: 696 ALRFSRDGEILASGSMDNTVRLW 718
Score = 50 (22.7 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 349 SLAWSTDGQTLFAGYSDNTIRVWQV 373
SLA+S +G+ L G +D + +W +
Sbjct: 654 SLAFSPNGRFLATGATDGRVLLWDI 678
>RGD|1359721 [details] [associations]
symbol:Btrc "beta-transducin repeat containing E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000209
"protein polyubiquitination" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;ISO] [GO:0006470
"protein dephosphorylation" evidence=IEA;ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISO]
[GO:0008013 "beta-catenin binding" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0030163 "protein catabolic
process" evidence=ISO] [GO:0031648 "protein destabilization"
evidence=IEA;ISO] [GO:0033598 "mammary gland epithelial cell
proliferation" evidence=IEA;ISO] [GO:0042753 "positive regulation
of circadian rhythm" evidence=IEA;ISO] [GO:0043122 "regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0045309
"protein phosphorylated amino acid binding" evidence=IEA;ISO]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA;ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA;ISO] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA;ISO]
[GO:0061136 "regulation of proteasomal protein catabolic process"
evidence=IEA;ISO] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 CTD:8945 HOGENOM:HOG000006638 HOVERGEN:HBG002521
KO:K03362 OrthoDB:EOG4F1X2M EMBL:BC085125 IPI:IPI00951294
RefSeq:NP_001007149.2 UniGene:Rn.21800 SMR:Q5U4E5 STRING:Q5U4E5
Ensembl:ENSRNOT00000064259 GeneID:361765 KEGG:rno:361765
UCSC:RGD:1359721 InParanoid:Q5U4E5 NextBio:677539
Genevestigator:Q5U4E5 Uniprot:Q5U4E5
Length = 506
Score = 243 (90.6 bits), Expect = 3.5e-18, P = 3.5e-18
Identities = 88/290 (30%), Positives = 133/290 (45%)
Query: 32 ILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLW 91
I+S RDNT+ IW D + ++ L GH+ + + L D ++GS D T+R+W
Sbjct: 217 IVSGLRDNTIKIW----DKSTLEC-KRILTGHTGSV--LCLQYDERVIITGSSDSTVRVW 269
Query: 92 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTI--VEDGHS 149
D+ AG+ H + VL + F+ N +V+ S+D++I +W+ + T+ V GH
Sbjct: 270 DVNAGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHR 327
Query: 150 DWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCA 209
V+ V F + IVSA DR +KVWN + C+ +GH + + L
Sbjct: 328 AAVNVVDFDDKY----IVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD--RLVV 381
Query: 210 SGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQ-----KIKL-DISRTLQKS 262
SG D LWD+ G L L H +++ + F R KIK+ D+ L
Sbjct: 382 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLMAALDPR 441
Query: 263 NLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTL 312
P + T R V + F D QIVSSS D TI +W+ L
Sbjct: 442 A----PAGTLCLRTLVEHSGR-VFRLQF--DEFQIVSSSHDDTILIWDFL 484
Score = 194 (73.4 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 61/222 (27%), Positives = 109/222 (49%)
Query: 5 TLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHS 64
TL+ + L GH G V + + + I++ S D+T+ +W D N G L H
Sbjct: 233 TLECKRILTGHTGSVLCLQYDER---VIITGSSDSTVRVW-----DVNAGEMLNTLIHHC 284
Query: 65 HFISDIVLSSDGNYALSGSWDKTLRLWDLAAGK--TTRR-FEDHTKDVLSVAFSVDNRQI 121
+ + L + ++ S D+++ +WD+A+ T RR H V V F D++ I
Sbjct: 285 EAV--LHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYI 340
Query: 122 VSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT 181
VS+S D+TIK+WNT + C+F +GH ++C+++ ++ ++VS D +++W++
Sbjct: 341 VSASGDRTIKVWNT-STCEFVRTLNGHKRGIACLQY----RDRLVVSGSSDNTIRLWDIE 395
Query: 182 -NCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
L++ GH + + D SG D +WDL
Sbjct: 396 CGACLRVLE-GHEELVRCIRF--DNKRIVSGAYDGKIKVWDL 434
Score = 168 (64.2 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 60/193 (31%), Positives = 91/193 (47%)
Query: 1 MSTET-LQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKR 59
M++ T + LR L GH V + + K+ I+S S D T+ +W + + +
Sbjct: 311 MASPTDITLRRVLVGHRAAVNVVDFDDKY---IVSASGDRTIKVWNTSTCEF-----VRT 362
Query: 60 LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 119
L GH I+ L +SGS D T+RLWD+ G R E H + V + F DN+
Sbjct: 363 LNGHKRGIA--CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNK 418
Query: 120 QIVSSSRDKTIKLWNTLAH----------CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSA 169
+IVS + D IK+W+ +A C T+VE HS V ++F Q IVS+
Sbjct: 419 RIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVE--HSGRVFRLQFD-EFQ---IVSS 472
Query: 170 GWDRMVKVWNLTN 182
D + +W+ N
Sbjct: 473 SHDDTILIWDFLN 485
Score = 167 (63.8 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 65/247 (26%), Positives = 114/247 (46%)
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
L D +SG D T+++WD + + R HT VL + + D R I++ S D T++
Sbjct: 210 LQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVR 267
Query: 132 LWNTLA-HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL---TNCKLKI 187
+W+ A T++ H + V +RF+ N ++V+ DR + VW++ T+ L+
Sbjct: 268 VWDVNAGEMLNTLIH--HCEAVLHLRFN----NGMMVTCSKDRSIAVWDMASPTDITLRR 321
Query: 188 NHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNR 246
GH +N V + ASG D +W+ + + + TL H I L +
Sbjct: 322 VLVGHRAAVNVVDFDDKYIVSASG--DRTIKVWNTSTCEFVRTLNGHKRGIACLQY---- 375
Query: 247 SFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTI 306
+ +L +S + + + L+ I G V + F DN++IVS + D I
Sbjct: 376 ---RDRLVVSGS-SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKI 429
Query: 307 KLWNTLA 313
K+W+ +A
Sbjct: 430 KVWDLMA 436
Score = 37 (18.1 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 355 DGQTLFAGYSDNTIRVWQV 373
D + + +G D I+VW +
Sbjct: 416 DNKRIVSGAYDGKIKVWDL 434
>DICTYBASE|DDB_G0293070 [details] [associations]
symbol:DDB_G0293070 "TROVE domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS] [GO:0005697 "telomerase holoenzyme complex"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008858
InterPro:IPR015943 Pfam:PF00400 Pfam:PF05731 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50988 SMART:SM00320
dictyBase:DDB_G0293070 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003723 EMBL:AAFI02000199
GO:GO:0005697 KO:K11127 InterPro:IPR025139 Pfam:PF13271
RefSeq:XP_629304.1 ProteinModelPortal:Q54CB5 PRIDE:Q54CB5
EnsemblProtists:DDB0237515 GeneID:8629027 KEGG:ddi:DDB_G0293070
InParanoid:Q54CB5 OMA:LPSDWIE ProtClustDB:CLSZ2429313
Uniprot:Q54CB5
Length = 2430
Score = 254 (94.5 bits), Expect = 4.4e-18, Sum P(2) = 4.4e-18
Identities = 89/321 (27%), Positives = 144/321 (44%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
TL GH+ W++ + + T+ S S DNT+I+W L G + K HS ++
Sbjct: 1559 TLVGHSNWISCFSFSDD-GKTLASSSWDNTVIVWDLI-----VGNQIHQFKDHSRAVNYC 1612
Query: 71 VLSSDGNYAL-SGSWDKTLRLWDLAAGKTTRRFED-HTKDVLSVAFSVDNRQIVSSSRDK 128
S N L S +WD ++ +++ + R F H+K V S +S D I SSS D
Sbjct: 1613 EFSPTANNLLMSCAWDSSIIIFNTSDKNIFRNFRSAHSKPVNSCCWSPDGTLIASSSWDG 1672
Query: 129 TIKLWN---TLAHCKFTIVEDGHSDW--VSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNC 183
TIK+WN T+A + V D + + +FS N + I++ V ++++ +
Sbjct: 1673 TIKIWNPFDTIAKDRLKHVIDASLSYGSIKSCKFSANSKQ--ILATTMKNDVLLFDVNSQ 1730
Query: 184 KLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHL-HTLVHNDI-ITALC 241
KL H+ +N ++S DG+ +G D A +W G L + L+ D L
Sbjct: 1731 KLISVMGNHSKSVNHCSLSNDGNYIVTGSDDATAKVWSSTLGTQLTNFLIPGDCWANCLA 1790
Query: 242 FSPNRSFQKI-KLDIS-RTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVS 299
FSP + + D + R S+ +Y + R + S+ FS I S
Sbjct: 1791 FSPTQPLLAVGATDCTVRLFDVSSNTIY-----REVAKLHGHTRAITSITFSPSGNLIAS 1845
Query: 300 SSRDKTIKLWNTLAH-CKFTI 319
+S D IK+WN H ++TI
Sbjct: 1846 TSEDLLIKVWNVQTHKAEYTI 1866
Score = 235 (87.8 bits), Expect = 3.6e-16, P = 3.6e-16
Identities = 101/388 (26%), Positives = 171/388 (44%)
Query: 2 STETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLK 61
ST QL L + W +A +P P + + D T+ ++ ++ +T Y K L
Sbjct: 1769 STLGTQLTNFLIPGDCWANCLAFSPTQPLLAVGAT-DCTVRLFDVS-SNTIYREVAK-LH 1825
Query: 62 GHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFED-HTKDVLSVAFSVDNR- 119
GH+ I+ I S GN S S D +++W++ K E H + ++F+ N
Sbjct: 1826 GHTRAITSITFSPSGNLIASTSEDLLIKVWNVQTHKAEYTIEKAHNDPINCISFNPTNEC 1885
Query: 120 QIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVS-CVRFSPNHQNPIIVSAGWDRMVKVW 178
+++S S D + K+W+ T+ +G ++ + CV +SP+ + I + D + V+
Sbjct: 1886 ELISCSDDYSTKVWSRFT-TSTTLSTEGSTNTIKHCV-YSPDGK--YIATVSRDCSIAVY 1941
Query: 179 NLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDII 237
++ KL GHT ++N T SPD SGG D N +W++ K L L H+ I
Sbjct: 1942 LCSSKKLLFRLKGHTDWVNFCTFSPDSKKLVSGGWDFNLRVWNIKTQKELLCLKGHSSSI 2001
Query: 238 TALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVD-NRQ 296
F+ ++ K IS + S + ++ G T R + V S D + +
Sbjct: 2002 EKAFFTKDQ-----KYIISASFDGS-VKVWDAQFGSEITSLRHQTR-ISDVVSSSDASGR 2054
Query: 297 IVSSSRDKTIKLWNTLA-HCKFTIVDLETKKMVEELRPD-----------VVSQSTKADP 344
I SSS D IK W +A C T+ + P+ S S+ +D
Sbjct: 2055 IFSSSDDGIIKSWYPVAGSCLATLTGHSGPIKQVQFNPNSGGGGSSSFSSFSSFSSSSDA 2114
Query: 345 PMCLSLAWSTDGQTLFAGYSDNTIRVWQ 372
P+ LS+A S+D D T+++W+
Sbjct: 2115 PVTLSIASSSD---------DGTVKLWE 2133
Score = 232 (86.7 bits), Expect = 7.9e-16, P = 7.9e-16
Identities = 79/301 (26%), Positives = 137/301 (45%)
Query: 32 ILSCSRDNTLIIWKLTRDD--TNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLR 89
I++ S D T +W T TN+ +P G + + + S G+ D T+R
Sbjct: 1755 IVTGSDDATAKVWSSTLGTQLTNFLIP-----GDC-WANCLAFSPTQPLLAVGATDCTVR 1808
Query: 90 LWDLAAGKTTR---RFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAH-CKFTIVE 145
L+D+++ R + HT+ + S+ FS I S+S D IK+WN H ++TI E
Sbjct: 1809 LFDVSSNTIYREVAKLHGHTRAITSITFSPSGNLIASTSEDLLIKVWNVQTHKAEYTI-E 1867
Query: 146 DGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDG 205
H+D ++C+ F+P ++ +I S D KVW+ ++ G T + SPDG
Sbjct: 1868 KAHNDPINCISFNPTNECELI-SCSDDYSTKVWSRFTTSTTLSTEGSTNTIKHCVYSPDG 1926
Query: 206 SLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNL 264
A+ +D + ++ + K L L H D + FSP+ KL +S NL
Sbjct: 1927 KYIATVSRDCSIAVYLCSSKKLLFRLKGHTDWVNFCTFSPDSK----KL-VSGGWD-FNL 1980
Query: 265 ILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLET 324
++ I K + F+ D + I+S+S D ++K+W+ + T + +T
Sbjct: 1981 RVWNIKTQKELLCLKGHSSSIEKAFFTKDQKYIISASFDGSVKVWDAQFGSEITSLRHQT 2040
Query: 325 K 325
+
Sbjct: 2041 R 2041
Score = 223 (83.6 bits), Expect = 3.6e-14, Sum P(2) = 3.6e-14
Identities = 65/249 (26%), Positives = 116/249 (46%)
Query: 73 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKL 132
S DG+ S D + ++ + G H+ + +FS D + + SSS D T+ +
Sbjct: 1531 SRDGSMIASAGKDSIIHIFKASNGSELLTLVGHSNWISCFSFSDDGKTLASSSWDNTVIV 1590
Query: 133 WNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKIN-HSG 191
W+ + + +D HS V+ FSP N +++S WD + ++N ++ + N S
Sbjct: 1591 WDLIVGNQIHQFKD-HSRAVNYCEFSPTANN-LLMSCAWDSSIIIFNTSDKNIFRNFRSA 1648
Query: 192 HTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCFSPNRS--FQ 249
H+ +N+ SPDG+L AS D +W+ D L H I +L + +S F
Sbjct: 1649 HSKPVNSCCWSPDGTLIASSSWDGTIKIWNPFDTIAKDRLKHV-IDASLSYGSIKSCKFS 1707
Query: 250 KIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLW 309
I T K++++L+ +N K+ + + + V + S D IV+ S D T K+W
Sbjct: 1708 ANSKQILATTMKNDVLLFDVNSQKLISVMGNHSKSVNHCSLSNDGNYIVTGSDDATAKVW 1767
Query: 310 NTLAHCKFT 318
++ + T
Sbjct: 1768 SSTLGTQLT 1776
Score = 200 (75.5 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 59/202 (29%), Positives = 96/202 (47%)
Query: 32 ILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLW 91
I S +D+ + I+K + G L GHS++IS S DG S SWD T+ +W
Sbjct: 1537 IASAGKDSIIHIFKASN-----GSELLTLVGHSNWISCFSFSDDGKTLASSSWDNTVIVW 1591
Query: 92 DLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSD 150
DL G +F+DH++ V FS N ++S + D +I ++NT F HS
Sbjct: 1592 DLIVGNQIHQFKDHSRAVNYCEFSPTANNLLMSCAWDSSIIIFNTSDKNIFRNFRSAHSK 1651
Query: 151 WVSCVRFSPNHQNPIIVSAGWDRMVKVWN----LTNCKLK--INHSGHTGYLNTVTVSPD 204
V+ +SP+ +I S+ WD +K+WN + +LK I+ S G + + S +
Sbjct: 1652 PVNSCCWSPD--GTLIASSSWDGTIKIWNPFDTIAKDRLKHVIDASLSYGSIKSCKFSAN 1709
Query: 205 GSLCASGGKDMNAMLWDLNDGK 226
+ + +L+D+N K
Sbjct: 1710 SKQILATTMKNDVLLFDVNSQK 1731
Score = 195 (73.7 bits), Expect = 6.4e-11, Sum P(2) = 6.4e-11
Identities = 59/234 (25%), Positives = 109/234 (46%)
Query: 29 PD-TIL-SCSRDNTLIIWK----LTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSG 82
PD T++ S S D T+ IW + +D + + G I S++ L+
Sbjct: 1660 PDGTLIASSSWDGTIKIWNPFDTIAKDRLKHVIDASLSYGS---IKSCKFSANSKQILAT 1716
Query: 83 SWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFT 142
+ + L+D+ + K +H+K V + S D IV+ S D T K+W++ + T
Sbjct: 1717 TMKNDVLLFDVNSQKLISVMGNHSKSVNHCSLSNDGNYIVTGSDDATAKVWSSTLGTQLT 1776
Query: 143 IVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS---GHTGYLNTV 199
W +C+ FSP P++ D V+++++++ + + GHT + ++
Sbjct: 1777 NFLIPGDCWANCLAFSPTQ--PLLAVGATDCTVRLFDVSSNTIYREVAKLHGHTRAITSI 1834
Query: 200 TVSPDGSLCASGGKDMNAMLWDLNDGKHLHTL--VHNDIITALCFSPNRSFQKI 251
T SP G+L AS +D+ +W++ K +T+ HND I + F+P + I
Sbjct: 1835 TFSPSGNLIASTSEDLLIKVWNVQTHKAEYTIEKAHNDPINCISFNPTNECELI 1888
Score = 179 (68.1 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 75/330 (22%), Positives = 132/330 (40%)
Query: 15 HNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSS 74
HN + I+ NP ++SCS D + +W T +G ++ I V S
Sbjct: 1870 HNDPINCISFNPTNECELISCSDDYSTKVWSRFTTSTTLST-----EGSTNTIKHCVYSP 1924
Query: 75 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 134
DG Y + S D ++ ++ ++ K R + HT V FS D++++VS D +++WN
Sbjct: 1925 DGKYIATVSRDCSIAVYLCSSKKLLFRLKGHTDWVNFCTFSPDSKKLVSGGWDFNLRVWN 1984
Query: 135 TLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT-NCKL-KINHSGH 192
+ ++ GHS + F+ + + I+SA +D VKVW+ ++ + H
Sbjct: 1985 IKTQKELLCLK-GHSSSIEKAFFTKDQK--YIISASFDGSVKVWDAQFGSEITSLRHQ-- 2039
Query: 193 TGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNR----- 246
T + V+ S S D W G L TL H+ I + F+PN
Sbjct: 2040 TRISDVVSSSDASGRIFSSSDDGIIKSWYPVAGSCLATLTGHSGPIKQVQFNPNSGGGGS 2099
Query: 247 ----SFQK--------IKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDN 294
SF + L I+ + + L+ N T + FS D
Sbjct: 2100 SSFSSFSSFSSSSDAPVTLSIASSSDDGTVKLWEFNSATATTSAHK--GSINQCVFSKDG 2157
Query: 295 RQIVSSSRDKTIKLWNTLAHCKFTIVDLET 324
+ + + +D + +W+ H + E+
Sbjct: 2158 KYVATCGQDCVLNIWDAKTHINLKTMIFES 2187
Score = 150 (57.9 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 50/174 (28%), Positives = 79/174 (45%)
Query: 139 CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNT 198
CK TI G D + +S +I SAG D ++ ++ +N + GH+ +++
Sbjct: 1514 CKQTIT--GLEDGATACCYS--RDGSMIASAGKDSIIHIFKASNGSELLTLVGHSNWISC 1569
Query: 199 VTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALC-FSPNRSFQKIKLDISR 257
+ S DG AS D ++WDL G +H + C FSP + L +S
Sbjct: 1570 FSFSDDGKTLASSSWDNTVIVWDLIVGNQIHQFKDHSRAVNYCEFSPTAN----NLLMSC 1625
Query: 258 TLQKSNLILYPINHGKMETPFFSLF-RDVLSVAFSVDNRQIVSSSRDKTIKLWN 310
S++I++ + + F S + V S +S D I SSS D TIK+WN
Sbjct: 1626 AWD-SSIIIFNTSDKNIFRNFRSAHSKPVNSCCWSPDGTLIASSSWDGTIKIWN 1678
Score = 142 (55.0 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 71/293 (24%), Positives = 117/293 (39%)
Query: 31 TILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRL 90
+I S S D T+ +W+ + H I+ V S DG Y + D L +
Sbjct: 2119 SIASSSDDGTVKLWE-------FNSATATTSAHKGSINQCVFSKDGKYVATCGQDCVLNI 2171
Query: 91 WDLAA--GKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKL----WNTLAHCKFT-- 142
WD T FE V + +F+ + +D T+++ W T+ H + T
Sbjct: 2172 WDAKTHINLKTMIFES---PVTTCSFNRSGVLFIGL-QDGTLEVYSKDWKTVLHKEKTNG 2227
Query: 143 -IVEDG-HSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS--GHTGYLNT 198
I H SP++ + S W V NL NC K ++ +
Sbjct: 2228 KITRSSAHPSLNIQSTESPDYIDLFAFST-WTNCV---NLLNCSEKYFDPIVSFDDWVES 2283
Query: 199 VTVSPDGSLCASGGKDMNAMLWD-LNDGKHLHTLVHNDIITALCFSPNRSFQKIKLDISR 257
V S G L A+G + ++ LND H + +T+L FSPN + I
Sbjct: 2284 VEFSTSGDLLAAGSRTKQVKIFSPLNDKPVTHQ-TSSSYVTSLSFSPNDKYLAIGT-FDG 2341
Query: 258 TLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWN 310
T++ L I GK+ + + S+ F +D+ ++VS S D+++ +WN
Sbjct: 2342 TVE-----LLDIASGKLRRILTTQVSSITSLKF-LDSTRLVSVSNDRSLIVWN 2388
Score = 42 (19.8 bits), Expect = 4.4e-18, Sum P(2) = 4.4e-18
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 352 WSTDGQTLFAGYSDNTIRVWQV 373
+S D + L +G D +RVW +
Sbjct: 1964 FSPDSKKLVSGGWDFNLRVWNI 1985
Score = 40 (19.1 bits), Expect = 5.8e-14, Sum P(2) = 5.8e-14
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 350 LAWSTDGQTLFAGYSDNTIRVWQVS 374
LA+S L G +D T+R++ VS
Sbjct: 1789 LAFSPTQPLLAVGATDCTVRLFDVS 1813
Score = 39 (18.8 bits), Expect = 7.3e-14, Sum P(2) = 7.3e-14
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 349 SLAWSTDGQTLFAGYSDNTIRVWQV 373
S+ +S G + + D I+VW V
Sbjct: 1833 SITFSPSGNLIASTSEDLLIKVWNV 1857
>UNIPROTKB|Q68DS0 [details] [associations]
symbol:DKFZp781N011 "Putative uncharacterized protein
DKFZp781N011" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AL627424 EMBL:AL133387 EMBL:AL445463
RefSeq:NP_003930.1 RefSeq:NP_378663.1 UniGene:Hs.643802
UniGene:Hs.713753 GeneID:8945 KEGG:hsa:8945 CTD:8945 HGNC:HGNC:1144
HOVERGEN:HBG002521 KO:K03362 ChiTaRS:BTRC GenomeRNAi:8945
EMBL:CR749295 IPI:IPI01012795 RefSeq:NP_001243785.1 SMR:Q68DS0
STRING:Q68DS0 Ensembl:ENST00000393441 Uniprot:Q68DS0
Length = 564
Score = 243 (90.6 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 88/290 (30%), Positives = 132/290 (45%)
Query: 32 ILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLW 91
I+S RDNT+ IW D N ++ L GH+ + + L D ++GS D T+R+W
Sbjct: 275 IVSGLRDNTIKIW-----DKNTLECKRILTGHTGSV--LCLQYDERVIITGSSDSTVRVW 327
Query: 92 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTI--VEDGHS 149
D+ G+ H + VL + F+ N +V+ S+D++I +W+ + T+ V GH
Sbjct: 328 DVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHR 385
Query: 150 DWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCA 209
V+ V F + IVSA DR +KVWN + C+ +GH + + L
Sbjct: 386 AAVNVVDFDDKY----IVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD--RLVV 439
Query: 210 SGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQ-----KIKL-DISRTLQKS 262
SG D LWD+ G L L H +++ + F R KIK+ D+ L
Sbjct: 440 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPR 499
Query: 263 NLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTL 312
P + T R V + F D QIVSSS D TI +W+ L
Sbjct: 500 A----PAGTLCLRTLVEHSGR-VFRLQF--DEFQIVSSSHDDTILIWDFL 542
Score = 194 (73.4 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 61/222 (27%), Positives = 109/222 (49%)
Query: 5 TLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHS 64
TL+ + L GH G V + + + I++ S D+T+ +W D N G L H
Sbjct: 291 TLECKRILTGHTGSVLCLQYDER---VIITGSSDSTVRVW-----DVNTGEMLNTLIHHC 342
Query: 65 HFISDIVLSSDGNYALSGSWDKTLRLWDLAAGK--TTRR-FEDHTKDVLSVAFSVDNRQI 121
+ + L + ++ S D+++ +WD+A+ T RR H V V F D++ I
Sbjct: 343 EAV--LHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYI 398
Query: 122 VSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT 181
VS+S D+TIK+WNT + C+F +GH ++C+++ ++ ++VS D +++W++
Sbjct: 399 VSASGDRTIKVWNT-STCEFVRTLNGHKRGIACLQY----RDRLVVSGSSDNTIRLWDIE 453
Query: 182 -NCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
L++ GH + + D SG D +WDL
Sbjct: 454 CGACLRVLE-GHEELVRCIRF--DNKRIVSGAYDGKIKVWDL 492
Score = 167 (63.8 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 60/193 (31%), Positives = 91/193 (47%)
Query: 1 MSTET-LQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKR 59
M++ T + LR L GH V + + K+ I+S S D T+ +W + + +
Sbjct: 369 MASPTDITLRRVLVGHRAAVNVVDFDDKY---IVSASGDRTIKVWNTSTCEF-----VRT 420
Query: 60 LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 119
L GH I+ L +SGS D T+RLWD+ G R E H + V + F DN+
Sbjct: 421 LNGHKRGIA--CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNK 476
Query: 120 QIVSSSRDKTIKLWNTLAH----------CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSA 169
+IVS + D IK+W+ +A C T+VE HS V ++F Q IVS+
Sbjct: 477 RIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVE--HSGRVFRLQFD-EFQ---IVSS 530
Query: 170 GWDRMVKVWNLTN 182
D + +W+ N
Sbjct: 531 SHDDTILIWDFLN 543
Score = 161 (61.7 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 64/247 (25%), Positives = 112/247 (45%)
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
L D +SG D T+++WD + R HT VL + + D R I++ S D T++
Sbjct: 268 LQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVR 325
Query: 132 LWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL---TNCKLKI 187
+W+ T++ H + V +RF+ N ++V+ DR + VW++ T+ L+
Sbjct: 326 VWDVNTGEMLNTLIH--HCEAVLHLRFN----NGMMVTCSKDRSIAVWDMASPTDITLRR 379
Query: 188 NHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNR 246
GH +N V + ASG D +W+ + + + TL H I L +
Sbjct: 380 VLVGHRAAVNVVDFDDKYIVSASG--DRTIKVWNTSTCEFVRTLNGHKRGIACLQY---- 433
Query: 247 SFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTI 306
+ +L +S + + + L+ I G V + F DN++IVS + D I
Sbjct: 434 ---RDRLVVSGS-SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKI 487
Query: 307 KLWNTLA 313
K+W+ +A
Sbjct: 488 KVWDLVA 494
Score = 37 (18.1 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 355 DGQTLFAGYSDNTIRVWQV 373
D + + +G D I+VW +
Sbjct: 474 DNKRIVSGAYDGKIKVWDL 492
>MGI|MGI:1338871 [details] [associations]
symbol:Btrc "beta-transducin repeat containing protein"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008013 "beta-catenin binding"
evidence=IDA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0031648
"protein destabilization" evidence=ISO] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IMP]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IDA] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IMP] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IMP] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IDA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
UniPathway:UPA00143 MGI:MGI:1338871 GO:GO:0005829 GO:GO:0005634
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH466534 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511
GO:GO:0019005 GO:GO:0004842 GO:GO:0045862 GO:GO:0008013
GO:GO:0000209 GO:GO:0071407 GO:GO:0045309 Reactome:REACT_109335
Reactome:REACT_24972 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OMA:NAYLKPM
OrthoDB:EOG4F1X2M EMBL:AF099932 EMBL:AF110396 EMBL:AF112979
EMBL:AF081887 EMBL:AF391190 EMBL:AF391178 EMBL:AF391179
EMBL:AF391180 EMBL:AF391181 EMBL:AF391182 EMBL:AF391183
EMBL:AF391184 EMBL:AF391185 EMBL:AF391186 EMBL:AF391187
EMBL:AF391188 EMBL:AF391189 EMBL:AK145624 EMBL:AK156660
EMBL:AK220183 EMBL:BC003989 IPI:IPI00402788 IPI:IPI00877195
RefSeq:NP_001032847.2 RefSeq:NP_033901.1 UniGene:Mm.119717
UniGene:Mm.446448 HSSP:Q9Y297 ProteinModelPortal:Q3ULA2 SMR:Q3ULA2
IntAct:Q3ULA2 STRING:Q3ULA2 PhosphoSite:Q3ULA2
Ensembl:ENSMUST00000065601 Ensembl:ENSMUST00000111936 GeneID:12234
KEGG:mmu:12234 UCSC:uc008hqy.2 UCSC:uc008hqz.2
GeneTree:ENSGT00690000101849 InParanoid:Q571K6 NextBio:280656
Bgee:Q3ULA2 Genevestigator:Q3ULA2 Uniprot:Q3ULA2
Length = 605
Score = 243 (90.6 bits), Expect = 5.4e-18, P = 5.4e-18
Identities = 88/290 (30%), Positives = 133/290 (45%)
Query: 32 ILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLW 91
I+S RDNT+ IW D + ++ L GH+ + + L D ++GS D T+R+W
Sbjct: 316 IVSGLRDNTIKIW----DKSTLEC-KRILTGHTGSV--LCLQYDERVIITGSSDSTVRVW 368
Query: 92 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTI--VEDGHS 149
D+ AG+ H + VL + F+ N +V+ S+D++I +W+ + T+ V GH
Sbjct: 369 DVNAGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHR 426
Query: 150 DWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCA 209
V+ V F + IVSA DR +KVWN + C+ +GH + + L
Sbjct: 427 AAVNVVDFDDKY----IVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD--RLVV 480
Query: 210 SGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQ-----KIKL-DISRTLQKS 262
SG D LWD+ G L L H +++ + F R KIK+ D+ L
Sbjct: 481 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLMAALDPR 540
Query: 263 NLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTL 312
P + T R V + F D QIVSSS D TI +W+ L
Sbjct: 541 A----PAGTLCLRTLVEHSGR-VFRLQF--DEFQIVSSSHDDTILIWDFL 583
Score = 194 (73.4 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
Identities = 61/222 (27%), Positives = 109/222 (49%)
Query: 5 TLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHS 64
TL+ + L GH G V + + + I++ S D+T+ +W D N G L H
Sbjct: 332 TLECKRILTGHTGSVLCLQYDER---VIITGSSDSTVRVW-----DVNAGEMLNTLIHHC 383
Query: 65 HFISDIVLSSDGNYALSGSWDKTLRLWDLAAGK--TTRR-FEDHTKDVLSVAFSVDNRQI 121
+ + L + ++ S D+++ +WD+A+ T RR H V V F D++ I
Sbjct: 384 EAV--LHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYI 439
Query: 122 VSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT 181
VS+S D+TIK+WNT + C+F +GH ++C+++ ++ ++VS D +++W++
Sbjct: 440 VSASGDRTIKVWNT-STCEFVRTLNGHKRGIACLQY----RDRLVVSGSSDNTIRLWDIE 494
Query: 182 -NCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
L++ GH + + D SG D +WDL
Sbjct: 495 CGACLRVLE-GHEELVRCIRF--DNKRIVSGAYDGKIKVWDL 533
Score = 168 (64.2 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 60/193 (31%), Positives = 91/193 (47%)
Query: 1 MSTET-LQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKR 59
M++ T + LR L GH V + + K+ I+S S D T+ +W + + +
Sbjct: 410 MASPTDITLRRVLVGHRAAVNVVDFDDKY---IVSASGDRTIKVWNTSTCEF-----VRT 461
Query: 60 LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 119
L GH I+ L +SGS D T+RLWD+ G R E H + V + F DN+
Sbjct: 462 LNGHKRGIA--CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNK 517
Query: 120 QIVSSSRDKTIKLWNTLAH----------CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSA 169
+IVS + D IK+W+ +A C T+VE HS V ++F Q IVS+
Sbjct: 518 RIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVE--HSGRVFRLQFD-EFQ---IVSS 571
Query: 170 GWDRMVKVWNLTN 182
D + +W+ N
Sbjct: 572 SHDDTILIWDFLN 584
Score = 167 (63.8 bits), Expect = 9.5e-09, Sum P(2) = 9.5e-09
Identities = 65/247 (26%), Positives = 114/247 (46%)
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
L D +SG D T+++WD + + R HT VL + + D R I++ S D T++
Sbjct: 309 LQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVR 366
Query: 132 LWNTLA-HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL---TNCKLKI 187
+W+ A T++ H + V +RF+ N ++V+ DR + VW++ T+ L+
Sbjct: 367 VWDVNAGEMLNTLIH--HCEAVLHLRFN----NGMMVTCSKDRSIAVWDMASPTDITLRR 420
Query: 188 NHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNR 246
GH +N V + ASG D +W+ + + + TL H I L +
Sbjct: 421 VLVGHRAAVNVVDFDDKYIVSASG--DRTIKVWNTSTCEFVRTLNGHKRGIACLQY---- 474
Query: 247 SFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTI 306
+ +L +S + + + L+ I G V + F DN++IVS + D I
Sbjct: 475 ---RDRLVVSGS-SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKI 528
Query: 307 KLWNTLA 313
K+W+ +A
Sbjct: 529 KVWDLMA 535
Score = 37 (18.1 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 355 DGQTLFAGYSDNTIRVWQV 373
D + + +G D I+VW +
Sbjct: 515 DNKRIVSGAYDGKIKVWDL 533
>UNIPROTKB|F1LMH8 [details] [associations]
symbol:Btrc "Protein Btrc" species:10116 "Rattus
norvegicus" [GO:0000209 "protein polyubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 GeneTree:ENSGT00690000101849 IPI:IPI00372531
PRIDE:F1LMH8 Ensembl:ENSRNOT00000022426 ArrayExpress:F1LMH8
Uniprot:F1LMH8
Length = 605
Score = 243 (90.6 bits), Expect = 5.4e-18, P = 5.4e-18
Identities = 88/290 (30%), Positives = 133/290 (45%)
Query: 32 ILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLW 91
I+S RDNT+ IW D + ++ L GH+ + + L D ++GS D T+R+W
Sbjct: 316 IVSGLRDNTIKIW----DKSTLEC-KRILTGHTGSV--LCLQYDERVIITGSSDSTVRVW 368
Query: 92 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTI--VEDGHS 149
D+ AG+ H + VL + F+ N +V+ S+D++I +W+ + T+ V GH
Sbjct: 369 DVNAGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHR 426
Query: 150 DWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCA 209
V+ V F + IVSA DR +KVWN + C+ +GH + + L
Sbjct: 427 AAVNVVDFDDKY----IVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD--RLVV 480
Query: 210 SGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQ-----KIKL-DISRTLQKS 262
SG D LWD+ G L L H +++ + F R KIK+ D+ L
Sbjct: 481 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLMAALDPR 540
Query: 263 NLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTL 312
P + T R V + F D QIVSSS D TI +W+ L
Sbjct: 541 A----PAGTLCLRTLVEHSGR-VFRLQF--DEFQIVSSSHDDTILIWDFL 583
Score = 194 (73.4 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
Identities = 61/222 (27%), Positives = 109/222 (49%)
Query: 5 TLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHS 64
TL+ + L GH G V + + + I++ S D+T+ +W D N G L H
Sbjct: 332 TLECKRILTGHTGSVLCLQYDER---VIITGSSDSTVRVW-----DVNAGEMLNTLIHHC 383
Query: 65 HFISDIVLSSDGNYALSGSWDKTLRLWDLAAGK--TTRR-FEDHTKDVLSVAFSVDNRQI 121
+ + L + ++ S D+++ +WD+A+ T RR H V V F D++ I
Sbjct: 384 EAV--LHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYI 439
Query: 122 VSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT 181
VS+S D+TIK+WNT + C+F +GH ++C+++ ++ ++VS D +++W++
Sbjct: 440 VSASGDRTIKVWNT-STCEFVRTLNGHKRGIACLQY----RDRLVVSGSSDNTIRLWDIE 494
Query: 182 -NCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
L++ GH + + D SG D +WDL
Sbjct: 495 CGACLRVLE-GHEELVRCIRF--DNKRIVSGAYDGKIKVWDL 533
Score = 168 (64.2 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 60/193 (31%), Positives = 91/193 (47%)
Query: 1 MSTET-LQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKR 59
M++ T + LR L GH V + + K+ I+S S D T+ +W + + +
Sbjct: 410 MASPTDITLRRVLVGHRAAVNVVDFDDKY---IVSASGDRTIKVWNTSTCEF-----VRT 461
Query: 60 LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 119
L GH I+ L +SGS D T+RLWD+ G R E H + V + F DN+
Sbjct: 462 LNGHKRGIA--CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNK 517
Query: 120 QIVSSSRDKTIKLWNTLAH----------CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSA 169
+IVS + D IK+W+ +A C T+VE HS V ++F Q IVS+
Sbjct: 518 RIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVE--HSGRVFRLQFD-EFQ---IVSS 571
Query: 170 GWDRMVKVWNLTN 182
D + +W+ N
Sbjct: 572 SHDDTILIWDFLN 584
Score = 167 (63.8 bits), Expect = 9.5e-09, Sum P(2) = 9.5e-09
Identities = 65/247 (26%), Positives = 114/247 (46%)
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
L D +SG D T+++WD + + R HT VL + + D R I++ S D T++
Sbjct: 309 LQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVR 366
Query: 132 LWNTLA-HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL---TNCKLKI 187
+W+ A T++ H + V +RF+ N ++V+ DR + VW++ T+ L+
Sbjct: 367 VWDVNAGEMLNTLIH--HCEAVLHLRFN----NGMMVTCSKDRSIAVWDMASPTDITLRR 420
Query: 188 NHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNR 246
GH +N V + ASG D +W+ + + + TL H I L +
Sbjct: 421 VLVGHRAAVNVVDFDDKYIVSASG--DRTIKVWNTSTCEFVRTLNGHKRGIACLQY---- 474
Query: 247 SFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTI 306
+ +L +S + + + L+ I G V + F DN++IVS + D I
Sbjct: 475 ---RDRLVVSGS-SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKI 528
Query: 307 KLWNTLA 313
K+W+ +A
Sbjct: 529 KVWDLMA 535
Score = 37 (18.1 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 355 DGQTLFAGYSDNTIRVWQV 373
D + + +G D I+VW +
Sbjct: 515 DNKRIVSGAYDGKIKVWDL 533
>UNIPROTKB|Q9Y297 [details] [associations]
symbol:BTRC "F-box/WD repeat-containing protein 1A"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0033598
"mammary gland epithelial cell proliferation" evidence=IEA]
[GO:0042753 "positive regulation of circadian rhythm" evidence=IEA]
[GO:0043122 "regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0031648 "protein destabilization" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0045862 "positive
regulation of proteolysis" evidence=IMP] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0016032
"viral reproduction" evidence=TAS] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=TAS] [GO:0051437 "positive regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0051439 "regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=TAS] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0045892 Reactome:REACT_115566 GO:GO:0019048 GO:GO:0007165
GO:GO:0045893 GO:GO:0016032 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016874 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0016567
GO:GO:0051726 GO:GO:0043433 GO:GO:0019005 GO:GO:0045862
GO:GO:0000209 GO:GO:0031145 GO:GO:0051437 GO:GO:0071407
Reactome:REACT_24941 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0045879 GO:GO:0042753 PDB:1P22
PDBsum:1P22 EMBL:AL627424 EMBL:AF101784 EMBL:Y14153 EMBL:AF129530
EMBL:GU727631 EMBL:AK313353 EMBL:AL133387 EMBL:AL445463
EMBL:BC027994 IPI:IPI00307418 IPI:IPI00413142 RefSeq:NP_003930.1
RefSeq:NP_378663.1 UniGene:Hs.643802 UniGene:Hs.713753 PDB:2P64
PDBsum:2P64 ProteinModelPortal:Q9Y297 SMR:Q9Y297 DIP:DIP-31607N
IntAct:Q9Y297 MINT:MINT-108636 STRING:Q9Y297 PhosphoSite:Q9Y297
DMDM:13124271 PRIDE:Q9Y297 DNASU:8945 Ensembl:ENST00000370187
Ensembl:ENST00000408038 GeneID:8945 KEGG:hsa:8945 UCSC:uc001kta.3
UCSC:uc001ktb.3 CTD:8945 GeneCards:GC10P103103 HGNC:HGNC:1144
HPA:CAB032986 MIM:603482 neXtProt:NX_Q9Y297 PharmGKB:PA25465
HOGENOM:HOG000006638 HOVERGEN:HBG002521 InParanoid:Q9Y297 KO:K03362
OMA:NAYLKPM OrthoDB:EOG4F1X2M PhylomeDB:Q9Y297 ChiTaRS:BTRC
EvolutionaryTrace:Q9Y297 GenomeRNAi:8945 NextBio:33645
ArrayExpress:Q9Y297 Bgee:Q9Y297 CleanEx:HS_BTRC
Genevestigator:Q9Y297 Uniprot:Q9Y297
Length = 605
Score = 243 (90.6 bits), Expect = 5.4e-18, P = 5.4e-18
Identities = 88/290 (30%), Positives = 132/290 (45%)
Query: 32 ILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLW 91
I+S RDNT+ IW D N ++ L GH+ + + L D ++GS D T+R+W
Sbjct: 316 IVSGLRDNTIKIW-----DKNTLECKRILTGHTGSV--LCLQYDERVIITGSSDSTVRVW 368
Query: 92 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTI--VEDGHS 149
D+ G+ H + VL + F+ N +V+ S+D++I +W+ + T+ V GH
Sbjct: 369 DVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHR 426
Query: 150 DWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCA 209
V+ V F + IVSA DR +KVWN + C+ +GH + + L
Sbjct: 427 AAVNVVDFDDKY----IVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD--RLVV 480
Query: 210 SGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQ-----KIKL-DISRTLQKS 262
SG D LWD+ G L L H +++ + F R KIK+ D+ L
Sbjct: 481 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPR 540
Query: 263 NLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTL 312
P + T R V + F D QIVSSS D TI +W+ L
Sbjct: 541 A----PAGTLCLRTLVEHSGR-VFRLQF--DEFQIVSSSHDDTILIWDFL 583
Score = 194 (73.4 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
Identities = 61/222 (27%), Positives = 109/222 (49%)
Query: 5 TLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHS 64
TL+ + L GH G V + + + I++ S D+T+ +W D N G L H
Sbjct: 332 TLECKRILTGHTGSVLCLQYDER---VIITGSSDSTVRVW-----DVNTGEMLNTLIHHC 383
Query: 65 HFISDIVLSSDGNYALSGSWDKTLRLWDLAAGK--TTRR-FEDHTKDVLSVAFSVDNRQI 121
+ + L + ++ S D+++ +WD+A+ T RR H V V F D++ I
Sbjct: 384 EAV--LHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYI 439
Query: 122 VSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT 181
VS+S D+TIK+WNT + C+F +GH ++C+++ ++ ++VS D +++W++
Sbjct: 440 VSASGDRTIKVWNT-STCEFVRTLNGHKRGIACLQY----RDRLVVSGSSDNTIRLWDIE 494
Query: 182 -NCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
L++ GH + + D SG D +WDL
Sbjct: 495 CGACLRVLE-GHEELVRCIRF--DNKRIVSGAYDGKIKVWDL 533
Score = 167 (63.8 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 60/193 (31%), Positives = 91/193 (47%)
Query: 1 MSTET-LQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKR 59
M++ T + LR L GH V + + K+ I+S S D T+ +W + + +
Sbjct: 410 MASPTDITLRRVLVGHRAAVNVVDFDDKY---IVSASGDRTIKVWNTSTCEF-----VRT 461
Query: 60 LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 119
L GH I+ L +SGS D T+RLWD+ G R E H + V + F DN+
Sbjct: 462 LNGHKRGIA--CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNK 517
Query: 120 QIVSSSRDKTIKLWNTLAH----------CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSA 169
+IVS + D IK+W+ +A C T+VE HS V ++F Q IVS+
Sbjct: 518 RIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVE--HSGRVFRLQFD-EFQ---IVSS 571
Query: 170 GWDRMVKVWNLTN 182
D + +W+ N
Sbjct: 572 SHDDTILIWDFLN 584
Score = 161 (61.7 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 64/247 (25%), Positives = 112/247 (45%)
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
L D +SG D T+++WD + R HT VL + + D R I++ S D T++
Sbjct: 309 LQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVR 366
Query: 132 LWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL---TNCKLKI 187
+W+ T++ H + V +RF+ N ++V+ DR + VW++ T+ L+
Sbjct: 367 VWDVNTGEMLNTLIH--HCEAVLHLRFN----NGMMVTCSKDRSIAVWDMASPTDITLRR 420
Query: 188 NHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNR 246
GH +N V + ASG D +W+ + + + TL H I L +
Sbjct: 421 VLVGHRAAVNVVDFDDKYIVSASG--DRTIKVWNTSTCEFVRTLNGHKRGIACLQY---- 474
Query: 247 SFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTI 306
+ +L +S + + + L+ I G V + F DN++IVS + D I
Sbjct: 475 ---RDRLVVSGS-SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKI 528
Query: 307 KLWNTLA 313
K+W+ +A
Sbjct: 529 KVWDLVA 535
Score = 37 (18.1 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 355 DGQTLFAGYSDNTIRVWQV 373
D + + +G D I+VW +
Sbjct: 515 DNKRIVSGAYDGKIKVWDL 533
>RGD|1309121 [details] [associations]
symbol:Fbxw11 "F-box and WD repeat domain containing 11"
species:10116 "Rattus norvegicus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006470
"protein dephosphorylation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISO] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031648 "protein destabilization" evidence=ISO] [GO:0042347
"negative regulation of NF-kappaB import into nucleus"
evidence=ISO] [GO:0042753 "positive regulation of circadian rhythm"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045862 "positive regulation
of proteolysis" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 RGD:1309121 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 IPI:IPI00368750 Ensembl:ENSRNOT00000005874
UCSC:RGD:1309121 ArrayExpress:F1M7I4 Uniprot:F1M7I4
Length = 493
Score = 240 (89.5 bits), Expect = 7.4e-18, P = 7.4e-18
Identities = 87/292 (29%), Positives = 134/292 (45%)
Query: 30 DTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLR 89
D I+S RDN++ IW D ++ K L GH+ + + L D ++GS D T+R
Sbjct: 202 DKIISGLRDNSIKIW----DKSSLEC-LKVLTGHTGSV--LCLQYDERVIVTGSSDSTVR 254
Query: 90 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTI--VEDG 147
+WD+ G+ H + VL + FS N +V+ S+D++I +W+ + T+ V G
Sbjct: 255 VWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASATDITLRRVLVG 312
Query: 148 HSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSL 207
H V+ V F + IVSA DR +KVW+ + C+ +GH + + L
Sbjct: 313 HRAAVNVVDFDDKY----IVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RL 366
Query: 208 CASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQ-----KIKL-DISRTLQ 260
SG D LWD+ G L L H +++ + F R KIK+ D+ L
Sbjct: 367 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALD 426
Query: 261 KSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTL 312
P + + T R V + F D QI+SSS D TI +W+ L
Sbjct: 427 PRA----PASTLCLRTLVEHSGR-VFRLQF--DEFQIISSSHDDTILIWDFL 471
Score = 163 (62.4 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 58/191 (30%), Positives = 87/191 (45%)
Query: 2 STETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLK 61
S + LR L GH V + + K+ I+S S D T+ +W + + + L
Sbjct: 300 SATDITLRRVLVGHRAAVNVVDFDDKY---IVSASGDRTIKVWSTSTCEF-----VRTLN 351
Query: 62 GHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 121
GH I+ L +SGS D T+RLWD+ G R E H + V + F DN++I
Sbjct: 352 GHKRGIA--CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRI 407
Query: 122 VSSSRDKTIKLWNTLAH----------CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGW 171
VS + D IK+W+ A C T+VE HS V ++F Q I+S+
Sbjct: 408 VSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVE--HSGRVFRLQFD-EFQ---IISSSH 461
Query: 172 DRMVKVWNLTN 182
D + +W+ N
Sbjct: 462 DDTILIWDFLN 472
Score = 163 (62.4 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 64/247 (25%), Positives = 114/247 (46%)
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
L D + +SG D ++++WD ++ + + HT VL + + D R IV+ S D T++
Sbjct: 197 LQYDDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVR 254
Query: 132 LWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL---TNCKLKI 187
+W+ T++ H++ V +RFS N ++V+ DR + VW++ T+ L+
Sbjct: 255 VWDVNTGEVLNTLIH--HNEAVLHLRFS----NGLMVTCSKDRSIAVWDMASATDITLRR 308
Query: 188 NHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNR 246
GH +N V + ASG D +W + + + TL H I L +
Sbjct: 309 VLVGHRAAVNVVDFDDKYIVSASG--DRTIKVWSTSTCEFVRTLNGHKRGIACLQY---- 362
Query: 247 SFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTI 306
+ +L +S + + + L+ I G V + F DN++IVS + D I
Sbjct: 363 ---RDRLVVSGS-SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKI 416
Query: 307 KLWNTLA 313
K+W+ A
Sbjct: 417 KVWDLQA 423
Score = 37 (18.1 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 355 DGQTLFAGYSDNTIRVWQV 373
D + + +G D I+VW +
Sbjct: 403 DNKRIVSGAYDGKIKVWDL 421
>UNIPROTKB|E1BB14 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS
EMBL:DAAA02014455 IPI:IPI00703992 RefSeq:NP_001179276.1
UniGene:Bt.16171 ProteinModelPortal:E1BB14
Ensembl:ENSBTAT00000021348 GeneID:513340 KEGG:bta:513340
NextBio:20870819 Uniprot:E1BB14
Length = 340
Score = 207 (77.9 bits), Expect = 7.6e-18, Sum P(2) = 7.6e-18
Identities = 64/247 (25%), Positives = 111/247 (44%)
Query: 6 LQLRGTLNGHNGWVTQI--ATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGH 63
++ R TL GH + + AT+ K ++S S+D LI+W + + +P +
Sbjct: 45 MRTRRTLRGHLAKIYAMHWATDSKL---LVSASQDGKLIVWDTYTTNKVHAIPLR----- 96
Query: 64 SHFISDIVLSSDGNYALSGSWDKTLRLWDLAA--G--KTTRRFEDHTKDVLSVAFSVDNR 119
S ++ + GN+ G D ++ L + G K +R HT LS +D+
Sbjct: 97 SSWVMTCAYAPSGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHT-GYLSCCRFLDDN 155
Query: 120 QIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
IV+SS D T LW+ + T+ GH+ + SP+ + + +S D K+W+
Sbjct: 156 NIVTSSGDTTCALWDIETGQQKTVFV-GHTGDCMSLAVSPDFR--LFISGACDASAKLWD 212
Query: 180 LTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDII-- 237
+ + +GH +N + P+G +G D + L+DL + L T H II
Sbjct: 213 VREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTTYAHESIICG 272
Query: 238 -TALCFS 243
T++ FS
Sbjct: 273 ITSVAFS 279
Score = 204 (76.9 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 64/262 (24%), Positives = 115/262 (43%)
Query: 57 QKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 116
++ L+GH I + ++D +S S D L +WD + V++ A++
Sbjct: 48 RRTLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAP 107
Query: 117 DNRQIVSSSRDKTIKLWNTLA---HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDR 173
+ D +++ + + K + H+ ++SC RF + N I+ S+G D
Sbjct: 108 SGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDD--NNIVTSSG-DT 164
Query: 174 MVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV- 232
+W++ + K GHTG ++ VSPD L SG D +A LWD+ +G T
Sbjct: 165 TCALWDIETGQQKTVFVGHTGDCMSLAVSPDFRLFISGACDASAKLWDVREGTCRQTFTG 224
Query: 233 HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFF--SLFRDVLSVAF 290
H I A+CF PN I ++ L+ + + T + S+ + SVAF
Sbjct: 225 HESDINAICFFPNGEA------ICTGSDDASCRLFDLRADQELTTYAHESIICGITSVAF 278
Query: 291 SVDNRQIVSSSRDKTIKLWNTL 312
S+ R + + D +W+++
Sbjct: 279 SLSGRLLFAGYDDFNCNVWDSM 300
Score = 183 (69.5 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 58/211 (27%), Positives = 91/211 (43%)
Query: 16 NGWVTQIATNPKFPDTILSCSR-DNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSS 74
+ WV A P ++C DN I+ L + N V + L H+ ++S
Sbjct: 97 SSWVMTCAYAPS--GNFVACGGLDNMCSIYSLKSREGNVKV-SRELSAHTGYLSCCRFLD 153
Query: 75 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 134
D N S S D T LWD+ G+ F HT D +S+A S D R +S + D + KLW+
Sbjct: 154 DNNIVTS-SGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDFRLFISGACDASAKLWD 212
Query: 135 TL-AHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHT 193
C+ T GH ++ + F PN + I + D ++++L ++ H
Sbjct: 213 VREGTCRQTFT--GHESDINAICFFPNGE--AICTGSDDASCRLFDL-RADQELTTYAHE 267
Query: 194 GYL---NTVTVSPDGSLCASGGKDMNAMLWD 221
+ +V S G L +G D N +WD
Sbjct: 268 SIICGITSVAFSLSGRLLFAGYDDFNCNVWD 298
Score = 175 (66.7 bits), Expect = 9.5e-14, Sum P(2) = 9.5e-14
Identities = 55/227 (24%), Positives = 98/227 (43%)
Query: 97 KTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVR 156
+T R H + ++ ++ D++ +VS+S+D + +W+T K + S WV
Sbjct: 46 RTRRTLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPL-RSSWVMTCA 104
Query: 157 FSPNHQNPIIVSAGWDRMVKVWNLT----NCKLKINHSGHTGYLNTVTVSPDGSLCASGG 212
++P+ + G D M +++L N K+ S HTGYL+ D ++ S G
Sbjct: 105 YAPSGN--FVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSG 162
Query: 213 KDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINH 271
D LWD+ G+ V H +L SP+ +L IS S L+ +
Sbjct: 163 -DTTCALWDIETGQQKTVFVGHTGDCMSLAVSPD-----FRLFISGACDASAK-LWDVRE 215
Query: 272 GKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFT 318
G F D+ ++ F + I + S D + +L++ A + T
Sbjct: 216 GTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELT 262
Score = 172 (65.6 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 49/178 (27%), Positives = 82/178 (46%)
Query: 4 ETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGH 63
ET Q + GH G +A +P F +S + D + +W D G ++ GH
Sbjct: 172 ETGQQKTVFVGHTGDCMSLAVSPDFR-LFISGACDASAKLW-----DVREGTCRQTFTGH 225
Query: 64 SHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGK--TTRRFEDHTKDVLSVAFSVDNRQI 121
I+ I +G +GS D + RL+DL A + TT E + SVAFS+ R +
Sbjct: 226 ESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTTYAHESIICGITSVAFSLSGRLL 285
Query: 122 VSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
+ D +W+++ C+ + GH + VSC+ + + + + WD +K+WN
Sbjct: 286 FAGYDDFNCNVWDSMK-CERVGILSGHDNRVSCLGVTADGM--AVATGSWDSFLKIWN 340
Score = 165 (63.1 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 52/214 (24%), Positives = 97/214 (45%)
Query: 12 LNGHNGWVTQIATNPKFPD--TILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISD 69
L+ H G+++ +F D I++ S D T +W D G + GH+
Sbjct: 139 LSAHTGYLSCC----RFLDDNNIVTSSGDTTCALW-----DIETGQQKTVFVGHTGDCMS 189
Query: 70 IVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKT 129
+ +S D +SG+ D + +LWD+ G + F H D+ ++ F + I + S D +
Sbjct: 190 LAVSPDFRLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDAS 249
Query: 130 IKLWNTLAHCKFTI-VEDGHSDWVSCVRFSPNHQNPIIVSAGWDRM-VKVWNLTNCKLKI 187
+L++ A + T + ++ V FS + + ++ AG+D VW+ C+
Sbjct: 250 CRLFDLRADQELTTYAHESIICGITSVAFSLSGR---LLFAGYDDFNCNVWDSMKCERVG 306
Query: 188 NHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWD 221
SGH ++ + V+ DG A+G D +W+
Sbjct: 307 ILSGHDNRVSCLGVTADGMAVATGSWDSFLKIWN 340
Score = 66 (28.3 bits), Expect = 7.6e-18, Sum P(2) = 7.6e-18
Identities = 18/53 (33%), Positives = 25/53 (47%)
Query: 330 ELRPDVVSQSTKADPPMC--LSLAWSTDGQTLFAGYSDNTIRVWQVSVTSRGG 380
+LR D + + +C S+A+S G+ LFAGY D VW R G
Sbjct: 254 DLRADQELTTYAHESIICGITSVAFSLSGRLLFAGYDDFNCNVWDSMKCERVG 306
Score = 39 (18.8 bits), Expect = 4.9e-15, Sum P(2) = 4.9e-15
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 347 CLSLAWSTDGQTLFAGYSDNTIRVW 371
CL + + DG + G D+ +++W
Sbjct: 317 CLGV--TADGMAVATGSWDSFLKIW 339
>ZFIN|ZDB-GENE-040426-2855 [details] [associations]
symbol:gnb1b "guanine nucleotide binding protein
(G protein), beta polypeptide 1b" species:7955 "Danio rerio"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-040426-2855 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:CU207276 EMBL:CR854824 EMBL:BC044482
EMBL:BC152684 IPI:IPI00483806 RefSeq:NP_998646.1
RefSeq:XP_003198887.1 UniGene:Dr.26330 SMR:Q803H5 STRING:Q803H5
Ensembl:ENSDART00000015309 Ensembl:ENSDART00000084989
Ensembl:ENSDART00000136035 GeneID:100537780 GeneID:406796
KEGG:dre:100537780 KEGG:dre:406796 CTD:406796 InParanoid:Q803H5
NextBio:20818306 Uniprot:Q803H5
Length = 340
Score = 209 (78.6 bits), Expect = 3.3e-15, Sum P(2) = 3.3e-15
Identities = 63/260 (24%), Positives = 116/260 (44%)
Query: 57 QKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 116
++ L+GH I + +D +S S D L +WD + V++ A++
Sbjct: 48 RRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAP 107
Query: 117 DNRQIVSSSRDKTIKLWNTLA---HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDR 173
+ D +++ + + + GH+ ++SC RF ++Q I+ S+G D
Sbjct: 108 SGNYVACGGLDNICSIYSLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ--IVTSSG-DT 164
Query: 174 MVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV- 232
+W++ + +GHTG + +++++PD L SG D +A LWD+ +G T
Sbjct: 165 TCALWDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDIREGMCRQTFTG 224
Query: 233 HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSV 292
H I A+CF PN + D T + +L + M ++ + SVAFS
Sbjct: 225 HESDINAICFFPNGNAFATGSD-DATCRLFDL---RADQELMVYSHDNIICGITSVAFSK 280
Query: 293 DNRQIVSSSRDKTIKLWNTL 312
R +++ D +W+TL
Sbjct: 281 SGRLLLAGYDDFNCNVWDTL 300
Score = 206 (77.6 bits), Expect = 8.0e-18, Sum P(2) = 8.0e-18
Identities = 65/247 (26%), Positives = 113/247 (45%)
Query: 6 LQLRGTLNGHNGWVTQI--ATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGH 63
++ R TL GH + + T+ + ++S S+D LIIW + + +P +
Sbjct: 45 MRTRRTLRGHLAKIYAMHWGTDSRL---LVSASQDGKLIIWDSYTTNKVHAIPLR----- 96
Query: 64 SHFISDIVLSSDGNYALSGSWDKTLRLWDLAA--G--KTTRRFEDHTKDVLSVAFSVDNR 119
S ++ + GNY G D ++ L G + +R HT LS +D+
Sbjct: 97 SSWVMTCAYAPSGNYVACGGLDNICSIYSLKTREGNVRVSRELAGHT-GYLSCCRFLDDN 155
Query: 120 QIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
QIV+SS D T LW+ + + T GH+ V + +P+ + + VS D K+W+
Sbjct: 156 QIVTSSGDTTCALWD-IETGQQTTTFAGHTGDVMSLSLAPDTR--LFVSGACDASAKLWD 212
Query: 180 LTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDII-- 237
+ + +GH +N + P+G+ A+G D L+DL + L H++II
Sbjct: 213 IREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMVYSHDNIICG 272
Query: 238 -TALCFS 243
T++ FS
Sbjct: 273 ITSVAFS 279
Score = 203 (76.5 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 63/230 (27%), Positives = 104/230 (45%)
Query: 16 NGWVTQIATNPKFPDTILSCSR-DNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSS 74
+ WV A P ++C DN I+ L + N V + L GH+ ++S
Sbjct: 97 SSWVMTCAYAPS--GNYVACGGLDNICSIYSLKTREGNVRV-SRELAGHTGYLSCCRFLD 153
Query: 75 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 134
D N ++ S D T LWD+ G+ T F HT DV+S++ + D R VS + D + KLW+
Sbjct: 154 D-NQIVTSSGDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWD 212
Query: 135 TL-AHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL-TNCKLKI-NHSG 191
C+ T GH ++ + F PN N + D ++++L + +L + +H
Sbjct: 213 IREGMCRQTFT--GHESDINAICFFPNG-NAFATGSD-DATCRLFDLRADQELMVYSHDN 268
Query: 192 HTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITAL 240
+ +V S G L +G D N +WD L H++ ++ L
Sbjct: 269 IICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKADRAGVLAGHDNRVSCL 318
Score = 169 (64.5 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 51/222 (22%), Positives = 95/222 (42%)
Query: 97 KTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVR 156
+T R H + ++ + D+R +VS+S+D + +W++ K + S WV
Sbjct: 46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL-RSSWVMTCA 104
Query: 157 FSPNHQNPIIVSAGWDRMVKVWNLT----NCKLKINHSGHTGYLNTVTVSPDGSLCASGG 212
++P+ + G D + +++L N ++ +GHTGYL+ D + S G
Sbjct: 105 YAPSGN--YVACGGLDNICSIYSLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG 162
Query: 213 KDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINH 271
D LWD+ G+ T H + +L +P+ +L +S S L+ I
Sbjct: 163 -DTTCALWDIETGQQTTTFAGHTGDVMSLSLAPDT-----RLFVSGACDASAK-LWDIRE 215
Query: 272 GKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA 313
G F D+ ++ F + + S D T +L++ A
Sbjct: 216 GMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRA 257
Score = 163 (62.4 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 51/214 (23%), Positives = 94/214 (43%)
Query: 12 LNGHNGWVTQIATNPKFPDT--ILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISD 69
L GH G+++ +F D I++ S D T +W D G GH+ +
Sbjct: 139 LAGHTGYLSCC----RFLDDNQIVTSSGDTTCALW-----DIETGQQTTTFAGHTGDVMS 189
Query: 70 IVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKT 129
+ L+ D +SG+ D + +LWD+ G + F H D+ ++ F + + S D T
Sbjct: 190 LSLAPDTRLFVSGACDASAKLWDIREGMCRQTFTGHESDINAICFFPNGNAFATGSDDAT 249
Query: 130 IKLWNTLAHCKFTIVE-DGHSDWVSCVRFSPNHQNPIIVSAGWDRM-VKVWNLTNCKLKI 187
+L++ A + + D ++ V FS + + ++ AG+D VW+
Sbjct: 250 CRLFDLRADQELMVYSHDNIICGITSVAFSKSGR---LLLAGYDDFNCNVWDTLKADRAG 306
Query: 188 NHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWD 221
+GH ++ + V+ DG A+G D +W+
Sbjct: 307 VLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 162 (62.1 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 53/181 (29%), Positives = 83/181 (45%)
Query: 4 ETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSR--DNTLIIWKLTRDDTNYGVPQKRLK 61
ET Q T GH G V ++ P DT L S D + +W D G+ ++
Sbjct: 172 ETGQQTTTFAGHTGDVMSLSLAP---DTRLFVSGACDASAKLW-----DIREGMCRQTFT 223
Query: 62 GHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK---DVLSVAFSVDN 118
GH I+ I +GN +GS D T RL+DL A + + H + SVAFS
Sbjct: 224 GHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMVYS-HDNIICGITSVAFSKSG 282
Query: 119 RQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVW 178
R +++ D +W+TL + ++ GH + VSC+ + + + + WD +K+W
Sbjct: 283 RLLLAGYDDFNCNVWDTLKADRAGVLA-GHDNRVSCLGVTDDGM--AVATGSWDSFLKIW 339
Query: 179 N 179
N
Sbjct: 340 N 340
Score = 67 (28.6 bits), Expect = 8.0e-18, Sum P(2) = 8.0e-18
Identities = 18/53 (33%), Positives = 23/53 (43%)
Query: 330 ELRPDVVSQSTKADPPMC--LSLAWSTDGQTLFAGYSDNTIRVWQVSVTSRGG 380
+LR D D +C S+A+S G+ L AGY D VW R G
Sbjct: 254 DLRADQELMVYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKADRAG 306
Score = 38 (18.4 bits), Expect = 3.3e-15, Sum P(2) = 3.3e-15
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 347 CLSLAWSTDGQTLFAGYSDNTIRVW 371
CL + + DG + G D+ +++W
Sbjct: 317 CLGV--TDDGMAVATGSWDSFLKIW 339
>ZFIN|ZDB-GENE-030131-823 [details] [associations]
symbol:gnb1a "guanine nucleotide binding protein (G
protein), beta polypeptide 1a" species:7955 "Danio rerio"
[GO:0007165 "signal transduction" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-030131-823 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC056708 EMBL:BC071277 IPI:IPI00506088
RefSeq:NP_997774.1 UniGene:Dr.75526 ProteinModelPortal:Q6PH57
SMR:Q6PH57 STRING:Q6PH57 PRIDE:Q6PH57 Ensembl:ENSDART00000130104
GeneID:322104 KEGG:dre:322104 CTD:322104 InParanoid:Q6PH57
NextBio:20807673 Bgee:Q6PH57 Uniprot:Q6PH57
Length = 340
Score = 208 (78.3 bits), Expect = 4.6e-15, Sum P(2) = 4.6e-15
Identities = 63/260 (24%), Positives = 115/260 (44%)
Query: 57 QKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 116
++ L+GH I + +D +S S D L +WD + V++ A++
Sbjct: 48 RRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAP 107
Query: 117 DNRQIVSSSRDKTIKLWNTLA---HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDR 173
+ D ++N + + + GH+ ++SC RF ++Q I+ S+G D
Sbjct: 108 SGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ--IVTSSG-DT 164
Query: 174 MVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV- 232
+W++ + +GHTG + +++++PD L SG D +A LWD+ +G T
Sbjct: 165 TCALWDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTG 224
Query: 233 HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSV 292
H I A+CF PN + D T + +L + M ++ + SVAFS
Sbjct: 225 HESDINAICFFPNGNAFATGSD-DATCRLFDL---RADQELMVYSHDNIICGITSVAFSK 280
Query: 293 DNRQIVSSSRDKTIKLWNTL 312
R +++ D +W+ L
Sbjct: 281 SGRLLLAGYDDFNCNVWDAL 300
Score = 206 (77.6 bits), Expect = 8.0e-18, Sum P(2) = 8.0e-18
Identities = 65/247 (26%), Positives = 114/247 (46%)
Query: 6 LQLRGTLNGHNGWVTQI--ATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGH 63
++ R TL GH + + T+ + ++S S+D LIIW + + +P +
Sbjct: 45 MRTRRTLRGHLAKIYAMHWGTDSRL---LVSASQDGKLIIWDSYTTNKVHAIPLR----- 96
Query: 64 SHFISDIVLSSDGNYALSGSWDKTLRLWDLAA--G--KTTRRFEDHTKDVLSVAFSVDNR 119
S ++ + GNY G D +++L G + +R HT LS +D+
Sbjct: 97 SSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHT-GYLSCCRFLDDN 155
Query: 120 QIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
QIV+SS D T LW+ + + T GH+ V + +P+ + + VS D K+W+
Sbjct: 156 QIVTSSGDTTCALWD-IETGQQTTTFAGHTGDVMSLSLAPDTR--LFVSGACDASAKLWD 212
Query: 180 LTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDII-- 237
+ + +GH +N + P+G+ A+G D L+DL + L H++II
Sbjct: 213 VREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMVYSHDNIICG 272
Query: 238 -TALCFS 243
T++ FS
Sbjct: 273 ITSVAFS 279
Score = 204 (76.9 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 63/230 (27%), Positives = 104/230 (45%)
Query: 16 NGWVTQIATNPKFPDTILSCSR-DNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSS 74
+ WV A P ++C DN I+ L + N V + L GH+ ++S
Sbjct: 97 SSWVMTCAYAPS--GNYVACGGLDNICSIYNLKTREGNVRV-SRELAGHTGYLSCCRFLD 153
Query: 75 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 134
D N ++ S D T LWD+ G+ T F HT DV+S++ + D R VS + D + KLW+
Sbjct: 154 D-NQIVTSSGDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWD 212
Query: 135 TL-AHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL-TNCKLKI-NHSG 191
C+ T GH ++ + F PN N + D ++++L + +L + +H
Sbjct: 213 VREGMCRQTFT--GHESDINAICFFPNG-NAFATGSD-DATCRLFDLRADQELMVYSHDN 268
Query: 192 HTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITAL 240
+ +V S G L +G D N +WD L H++ ++ L
Sbjct: 269 IICGITSVAFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCL 318
Score = 173 (66.0 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 51/222 (22%), Positives = 95/222 (42%)
Query: 97 KTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVR 156
+T R H + ++ + D+R +VS+S+D + +W++ K + S WV
Sbjct: 46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL-RSSWVMTCA 104
Query: 157 FSPNHQNPIIVSAGWDRMVKVWNLT----NCKLKINHSGHTGYLNTVTVSPDGSLCASGG 212
++P+ + G D + ++NL N ++ +GHTGYL+ D + S G
Sbjct: 105 YAPSGN--YVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG 162
Query: 213 KDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINH 271
D LWD+ G+ T H + +L +P+ +L +S S L+ +
Sbjct: 163 -DTTCALWDIETGQQTTTFAGHTGDVMSLSLAPDT-----RLFVSGACDASAK-LWDVRE 215
Query: 272 GKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA 313
G F D+ ++ F + + S D T +L++ A
Sbjct: 216 GMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRA 257
Score = 162 (62.1 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 51/214 (23%), Positives = 94/214 (43%)
Query: 12 LNGHNGWVTQIATNPKFPDT--ILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISD 69
L GH G+++ +F D I++ S D T +W D G GH+ +
Sbjct: 139 LAGHTGYLSCC----RFLDDNQIVTSSGDTTCALW-----DIETGQQTTTFAGHTGDVMS 189
Query: 70 IVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKT 129
+ L+ D +SG+ D + +LWD+ G + F H D+ ++ F + + S D T
Sbjct: 190 LSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDAT 249
Query: 130 IKLWNTLAHCKFTIVE-DGHSDWVSCVRFSPNHQNPIIVSAGWDRM-VKVWNLTNCKLKI 187
+L++ A + + D ++ V FS + + ++ AG+D VW+
Sbjct: 250 CRLFDLRADQELMVYSHDNIICGITSVAFSKSGR---LLLAGYDDFNCNVWDALKADRAG 306
Query: 188 NHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWD 221
+GH ++ + V+ DG A+G D +W+
Sbjct: 307 VLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 158 (60.7 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 52/181 (28%), Positives = 82/181 (45%)
Query: 4 ETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSR--DNTLIIWKLTRDDTNYGVPQKRLK 61
ET Q T GH G V ++ P DT L S D + +W D G+ ++
Sbjct: 172 ETGQQTTTFAGHTGDVMSLSLAP---DTRLFVSGACDASAKLW-----DVREGMCRQTFT 223
Query: 62 GHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK---DVLSVAFSVDN 118
GH I+ I +GN +GS D T RL+DL A + + H + SVAFS
Sbjct: 224 GHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMVYS-HDNIICGITSVAFSKSG 282
Query: 119 RQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVW 178
R +++ D +W+ L + ++ GH + VSC+ + + + + WD +K+W
Sbjct: 283 RLLLAGYDDFNCNVWDALKADRAGVLA-GHDNRVSCLGVTDDGM--AVATGSWDSFLKIW 339
Query: 179 N 179
N
Sbjct: 340 N 340
Score = 67 (28.6 bits), Expect = 8.0e-18, Sum P(2) = 8.0e-18
Identities = 18/53 (33%), Positives = 23/53 (43%)
Query: 330 ELRPDVVSQSTKADPPMC--LSLAWSTDGQTLFAGYSDNTIRVWQVSVTSRGG 380
+LR D D +C S+A+S G+ L AGY D VW R G
Sbjct: 254 DLRADQELMVYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDALKADRAG 306
Score = 38 (18.4 bits), Expect = 4.6e-15, Sum P(2) = 4.6e-15
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 347 CLSLAWSTDGQTLFAGYSDNTIRVW 371
CL + + DG + G D+ +++W
Sbjct: 317 CLGV--TDDGMAVATGSWDSFLKIW 339
>UNIPROTKB|J9P544 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:J9P544 Ensembl:ENSCAFT00000045166 Uniprot:J9P544
Length = 510
Score = 240 (89.5 bits), Expect = 8.1e-18, P = 8.1e-18
Identities = 87/292 (29%), Positives = 134/292 (45%)
Query: 30 DTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLR 89
+ I+S RDN++ IW D T+ K L GH+ + + L D ++GS D T+R
Sbjct: 219 EKIISGLRDNSIKIW----DKTSLEC-LKVLTGHTGSV--LCLQYDERVIVTGSSDSTVR 271
Query: 90 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTI--VEDG 147
+WD+ G+ H + VL + FS N +V+ S+D++I +W+ + T+ V G
Sbjct: 272 VWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASATDITLRRVLVG 329
Query: 148 HSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSL 207
H V+ V F + IVSA DR +KVW+ + C+ +GH + + L
Sbjct: 330 HRAAVNVVDFDDKY----IVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RL 383
Query: 208 CASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQ-----KIKL-DISRTLQ 260
SG D LWD+ G L L H +++ + F R KIK+ D+ L
Sbjct: 384 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALD 443
Query: 261 KSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTL 312
P + + T R V + F D QI+SSS D TI +W+ L
Sbjct: 444 PRA----PASTLCLRTLVEHSGR-VFRLQF--DEFQIISSSHDDTILIWDFL 488
Score = 163 (62.4 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 58/191 (30%), Positives = 87/191 (45%)
Query: 2 STETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLK 61
S + LR L GH V + + K+ I+S S D T+ +W + + + L
Sbjct: 317 SATDITLRRVLVGHRAAVNVVDFDDKY---IVSASGDRTIKVWSTSTCEF-----VRTLN 368
Query: 62 GHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 121
GH I+ L +SGS D T+RLWD+ G R E H + V + F DN++I
Sbjct: 369 GHKRGIA--CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRI 424
Query: 122 VSSSRDKTIKLWNTLAH----------CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGW 171
VS + D IK+W+ A C T+VE HS V ++F Q I+S+
Sbjct: 425 VSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVE--HSGRVFRLQFD-EFQ---IISSSH 478
Query: 172 DRMVKVWNLTN 182
D + +W+ N
Sbjct: 479 DDTILIWDFLN 489
Score = 161 (61.7 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 64/247 (25%), Positives = 112/247 (45%)
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
L D +SG D ++++WD + + + HT VL + + D R IV+ S D T++
Sbjct: 214 LQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVR 271
Query: 132 LWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL---TNCKLKI 187
+W+ T++ H++ V +RFS N ++V+ DR + VW++ T+ L+
Sbjct: 272 VWDVNTGEVLNTLIH--HNEAVLHLRFS----NGLMVTCSKDRSIAVWDMASATDITLRR 325
Query: 188 NHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNR 246
GH +N V + ASG D +W + + + TL H I L +
Sbjct: 326 VLVGHRAAVNVVDFDDKYIVSASG--DRTIKVWSTSTCEFVRTLNGHKRGIACLQY---- 379
Query: 247 SFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTI 306
+ +L +S + + + L+ I G V + F DN++IVS + D I
Sbjct: 380 ---RDRLVVSGS-SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKI 433
Query: 307 KLWNTLA 313
K+W+ A
Sbjct: 434 KVWDLQA 440
Score = 37 (18.1 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 355 DGQTLFAGYSDNTIRVWQV 373
D + + +G D I+VW +
Sbjct: 420 DNKRIVSGAYDGKIKVWDL 438
>UNIPROTKB|B4DH70 [details] [associations]
symbol:FBXW11 "cDNA FLJ54601, highly similar to F-box/WD
repeat protein 11" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AC011410 HOGENOM:HOG000006638
HOVERGEN:HBG002521 OrthoDB:EOG4F1X2M UniGene:Hs.484138
HGNC:HGNC:13607 EMBL:AC011387 EMBL:AC113342 EMBL:AK294956
IPI:IPI01013614 SMR:B4DH70 STRING:B4DH70 Ensembl:ENST00000425623
UCSC:uc011dey.1 Uniprot:B4DH70
Length = 510
Score = 240 (89.5 bits), Expect = 8.1e-18, P = 8.1e-18
Identities = 87/292 (29%), Positives = 134/292 (45%)
Query: 30 DTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLR 89
+ I+S RDN++ IW D T+ K L GH+ + + L D ++GS D T+R
Sbjct: 219 EKIISGLRDNSIKIW----DKTSLEC-LKVLTGHTGSV--LCLQYDERVIVTGSSDSTVR 271
Query: 90 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTI--VEDG 147
+WD+ G+ H + VL + FS N +V+ S+D++I +W+ + T+ V G
Sbjct: 272 VWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASATDITLRRVLVG 329
Query: 148 HSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSL 207
H V+ V F + IVSA DR +KVW+ + C+ +GH + + L
Sbjct: 330 HRAAVNVVDFDDKY----IVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RL 383
Query: 208 CASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQ-----KIKL-DISRTLQ 260
SG D LWD+ G L L H +++ + F R KIK+ D+ L
Sbjct: 384 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALD 443
Query: 261 KSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTL 312
P + + T R V + F D QI+SSS D TI +W+ L
Sbjct: 444 PRA----PASTLCLRTLVEHSGR-VFRLQF--DEFQIISSSHDDTILIWDFL 488
Score = 163 (62.4 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 58/191 (30%), Positives = 87/191 (45%)
Query: 2 STETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLK 61
S + LR L GH V + + K+ I+S S D T+ +W + + + L
Sbjct: 317 SATDITLRRVLVGHRAAVNVVDFDDKY---IVSASGDRTIKVWSTSTCEF-----VRTLN 368
Query: 62 GHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 121
GH I+ L +SGS D T+RLWD+ G R E H + V + F DN++I
Sbjct: 369 GHKRGIA--CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRI 424
Query: 122 VSSSRDKTIKLWNTLAH----------CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGW 171
VS + D IK+W+ A C T+VE HS V ++F Q I+S+
Sbjct: 425 VSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVE--HSGRVFRLQFD-EFQ---IISSSH 478
Query: 172 DRMVKVWNLTN 182
D + +W+ N
Sbjct: 479 DDTILIWDFLN 489
Score = 161 (61.7 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 64/247 (25%), Positives = 112/247 (45%)
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
L D +SG D ++++WD + + + HT VL + + D R IV+ S D T++
Sbjct: 214 LQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVR 271
Query: 132 LWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL---TNCKLKI 187
+W+ T++ H++ V +RFS N ++V+ DR + VW++ T+ L+
Sbjct: 272 VWDVNTGEVLNTLIH--HNEAVLHLRFS----NGLMVTCSKDRSIAVWDMASATDITLRR 325
Query: 188 NHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNR 246
GH +N V + ASG D +W + + + TL H I L +
Sbjct: 326 VLVGHRAAVNVVDFDDKYIVSASG--DRTIKVWSTSTCEFVRTLNGHKRGIACLQY---- 379
Query: 247 SFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTI 306
+ +L +S + + + L+ I G V + F DN++IVS + D I
Sbjct: 380 ---RDRLVVSGS-SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKI 433
Query: 307 KLWNTLA 313
K+W+ A
Sbjct: 434 KVWDLQA 440
Score = 37 (18.1 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 355 DGQTLFAGYSDNTIRVWQV 373
D + + +G D I+VW +
Sbjct: 420 DNKRIVSGAYDGKIKVWDL 438
>UNIPROTKB|F1P5E8 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AADN02035964
EMBL:AADN02035965 EMBL:AADN02035966 IPI:IPI00735168
Ensembl:ENSGALT00000003489 ArrayExpress:F1P5E8 Uniprot:F1P5E8
Length = 515
Score = 240 (89.5 bits), Expect = 8.3e-18, P = 8.3e-18
Identities = 87/292 (29%), Positives = 134/292 (45%)
Query: 30 DTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLR 89
+ I+S RDN++ IW D T+ K L GH+ + + L D ++GS D T+R
Sbjct: 224 EKIISGLRDNSIKIW----DKTSLEC-LKVLTGHTGSV--LCLQYDERVIVTGSSDSTVR 276
Query: 90 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTI--VEDG 147
+WD+ G+ H + VL + FS N +V+ S+D++I +W+ + T+ V G
Sbjct: 277 VWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASPTDITLRRVLVG 334
Query: 148 HSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSL 207
H V+ V F + IVSA DR +KVW+ + C+ +GH + + L
Sbjct: 335 HRAAVNVVDFDDKY----IVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RL 388
Query: 208 CASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQ-----KIKL-DISRTLQ 260
SG D LWD+ G L L H +++ + F R KIK+ D+ L
Sbjct: 389 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALD 448
Query: 261 KSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTL 312
P + + T R V + F D QI+SSS D TI +W+ L
Sbjct: 449 PRA----PASTLCLRTLVEHSGR-VFRLQF--DEFQIISSSHDDTILIWDFL 493
Score = 163 (62.4 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 59/193 (30%), Positives = 90/193 (46%)
Query: 1 MSTET-LQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKR 59
M++ T + LR L GH V + + K+ I+S S D T+ +W + + +
Sbjct: 320 MASPTDITLRRVLVGHRAAVNVVDFDDKY---IVSASGDRTIKVWSTSTCEF-----VRT 371
Query: 60 LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 119
L GH I+ L +SGS D T+RLWD+ G R E H + V + F DN+
Sbjct: 372 LNGHKRGIA--CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNK 427
Query: 120 QIVSSSRDKTIKLWNTLAH----------CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSA 169
+IVS + D IK+W+ A C T+VE HS V ++F Q I+S+
Sbjct: 428 RIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVE--HSGRVFRLQFD-EFQ---IISS 481
Query: 170 GWDRMVKVWNLTN 182
D + +W+ N
Sbjct: 482 SHDDTILIWDFLN 494
Score = 161 (61.7 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 64/247 (25%), Positives = 112/247 (45%)
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
L D +SG D ++++WD + + + HT VL + + D R IV+ S D T++
Sbjct: 219 LQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVR 276
Query: 132 LWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL---TNCKLKI 187
+W+ T++ H++ V +RFS N ++V+ DR + VW++ T+ L+
Sbjct: 277 VWDVNTGEVLNTLIH--HNEAVLHLRFS----NGLMVTCSKDRSIAVWDMASPTDITLRR 330
Query: 188 NHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNR 246
GH +N V + ASG D +W + + + TL H I L +
Sbjct: 331 VLVGHRAAVNVVDFDDKYIVSASG--DRTIKVWSTSTCEFVRTLNGHKRGIACLQY---- 384
Query: 247 SFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTI 306
+ +L +S + + + L+ I G V + F DN++IVS + D I
Sbjct: 385 ---RDRLVVSGS-SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKI 438
Query: 307 KLWNTLA 313
K+W+ A
Sbjct: 439 KVWDLQA 445
Score = 37 (18.1 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 355 DGQTLFAGYSDNTIRVWQV 373
D + + +G D I+VW +
Sbjct: 425 DNKRIVSGAYDGKIKVWDL 443
>UNIPROTKB|F1M373 [details] [associations]
symbol:Fbxw11 "Protein Fbxw11" species:10116 "Rattus
norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1309121 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 GO:GO:0045892
GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842
GO:GO:0045862 GO:GO:0000209 GO:GO:0031648 GO:GO:0042347
GO:GO:0031146 GO:GO:0042753 IPI:IPI00870648
Ensembl:ENSRNOT00000006078 ArrayExpress:F1M373 Uniprot:F1M373
Length = 527
Score = 240 (89.5 bits), Expect = 8.9e-18, P = 8.9e-18
Identities = 87/292 (29%), Positives = 134/292 (45%)
Query: 30 DTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLR 89
D I+S RDN++ IW D ++ K L GH+ + + L D ++GS D T+R
Sbjct: 236 DKIISGLRDNSIKIW----DKSSLEC-LKVLTGHTGSV--LCLQYDERVIVTGSSDSTVR 288
Query: 90 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTI--VEDG 147
+WD+ G+ H + VL + FS N +V+ S+D++I +W+ + T+ V G
Sbjct: 289 VWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASATDITLRRVLVG 346
Query: 148 HSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSL 207
H V+ V F + IVSA DR +KVW+ + C+ +GH + + L
Sbjct: 347 HRAAVNVVDFDDKY----IVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RL 400
Query: 208 CASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQ-----KIKL-DISRTLQ 260
SG D LWD+ G L L H +++ + F R KIK+ D+ L
Sbjct: 401 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALD 460
Query: 261 KSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTL 312
P + + T R V + F D QI+SSS D TI +W+ L
Sbjct: 461 PRA----PASTLCLRTLVEHSGR-VFRLQF--DEFQIISSSHDDTILIWDFL 505
Score = 163 (62.4 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 58/191 (30%), Positives = 87/191 (45%)
Query: 2 STETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLK 61
S + LR L GH V + + K+ I+S S D T+ +W + + + L
Sbjct: 334 SATDITLRRVLVGHRAAVNVVDFDDKY---IVSASGDRTIKVWSTSTCEF-----VRTLN 385
Query: 62 GHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 121
GH I+ L +SGS D T+RLWD+ G R E H + V + F DN++I
Sbjct: 386 GHKRGIA--CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRI 441
Query: 122 VSSSRDKTIKLWNTLAH----------CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGW 171
VS + D IK+W+ A C T+VE HS V ++F Q I+S+
Sbjct: 442 VSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVE--HSGRVFRLQFD-EFQ---IISSSH 495
Query: 172 DRMVKVWNLTN 182
D + +W+ N
Sbjct: 496 DDTILIWDFLN 506
Score = 163 (62.4 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 64/247 (25%), Positives = 114/247 (46%)
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
L D + +SG D ++++WD ++ + + HT VL + + D R IV+ S D T++
Sbjct: 231 LQYDDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVR 288
Query: 132 LWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL---TNCKLKI 187
+W+ T++ H++ V +RFS N ++V+ DR + VW++ T+ L+
Sbjct: 289 VWDVNTGEVLNTLIH--HNEAVLHLRFS----NGLMVTCSKDRSIAVWDMASATDITLRR 342
Query: 188 NHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNR 246
GH +N V + ASG D +W + + + TL H I L +
Sbjct: 343 VLVGHRAAVNVVDFDDKYIVSASG--DRTIKVWSTSTCEFVRTLNGHKRGIACLQY---- 396
Query: 247 SFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTI 306
+ +L +S + + + L+ I G V + F DN++IVS + D I
Sbjct: 397 ---RDRLVVSGS-SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKI 450
Query: 307 KLWNTLA 313
K+W+ A
Sbjct: 451 KVWDLQA 457
Score = 37 (18.1 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 355 DGQTLFAGYSDNTIRVWQV 373
D + + +G D I+VW +
Sbjct: 437 DNKRIVSGAYDGKIKVWDL 455
>UNIPROTKB|E2RTE4 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:E2RTE4 Ensembl:ENSCAFT00000026749 Uniprot:E2RTE4
Length = 529
Score = 240 (89.5 bits), Expect = 9.0e-18, P = 9.0e-18
Identities = 87/292 (29%), Positives = 134/292 (45%)
Query: 30 DTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLR 89
+ I+S RDN++ IW D T+ K L GH+ + + L D ++GS D T+R
Sbjct: 238 EKIISGLRDNSIKIW----DKTSLEC-LKVLTGHTGSV--LCLQYDERVIVTGSSDSTVR 290
Query: 90 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTI--VEDG 147
+WD+ G+ H + VL + FS N +V+ S+D++I +W+ + T+ V G
Sbjct: 291 VWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASATDITLRRVLVG 348
Query: 148 HSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSL 207
H V+ V F + IVSA DR +KVW+ + C+ +GH + + L
Sbjct: 349 HRAAVNVVDFDDKY----IVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RL 402
Query: 208 CASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQ-----KIKL-DISRTLQ 260
SG D LWD+ G L L H +++ + F R KIK+ D+ L
Sbjct: 403 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALD 462
Query: 261 KSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTL 312
P + + T R V + F D QI+SSS D TI +W+ L
Sbjct: 463 PRA----PASTLCLRTLVEHSGR-VFRLQF--DEFQIISSSHDDTILIWDFL 507
Score = 163 (62.4 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 58/191 (30%), Positives = 87/191 (45%)
Query: 2 STETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLK 61
S + LR L GH V + + K+ I+S S D T+ +W + + + L
Sbjct: 336 SATDITLRRVLVGHRAAVNVVDFDDKY---IVSASGDRTIKVWSTSTCEF-----VRTLN 387
Query: 62 GHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 121
GH I+ L +SGS D T+RLWD+ G R E H + V + F DN++I
Sbjct: 388 GHKRGIA--CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRI 443
Query: 122 VSSSRDKTIKLWNTLAH----------CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGW 171
VS + D IK+W+ A C T+VE HS V ++F Q I+S+
Sbjct: 444 VSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVE--HSGRVFRLQFD-EFQ---IISSSH 497
Query: 172 DRMVKVWNLTN 182
D + +W+ N
Sbjct: 498 DDTILIWDFLN 508
Score = 161 (61.7 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 64/247 (25%), Positives = 112/247 (45%)
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
L D +SG D ++++WD + + + HT VL + + D R IV+ S D T++
Sbjct: 233 LQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVR 290
Query: 132 LWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL---TNCKLKI 187
+W+ T++ H++ V +RFS N ++V+ DR + VW++ T+ L+
Sbjct: 291 VWDVNTGEVLNTLIH--HNEAVLHLRFS----NGLMVTCSKDRSIAVWDMASATDITLRR 344
Query: 188 NHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNR 246
GH +N V + ASG D +W + + + TL H I L +
Sbjct: 345 VLVGHRAAVNVVDFDDKYIVSASG--DRTIKVWSTSTCEFVRTLNGHKRGIACLQY---- 398
Query: 247 SFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTI 306
+ +L +S + + + L+ I G V + F DN++IVS + D I
Sbjct: 399 ---RDRLVVSGS-SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKI 452
Query: 307 KLWNTLA 313
K+W+ A
Sbjct: 453 KVWDLQA 459
Score = 37 (18.1 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 355 DGQTLFAGYSDNTIRVWQV 373
D + + +G D I+VW +
Sbjct: 439 DNKRIVSGAYDGKIKVWDL 457
>UNIPROTKB|F1MLG0 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045862 "positive
regulation of proteolysis" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:DAAA02049882
EMBL:DAAA02049883 IPI:IPI00699126 Ensembl:ENSBTAT00000061118
Uniprot:F1MLG0
Length = 530
Score = 240 (89.5 bits), Expect = 9.0e-18, P = 9.0e-18
Identities = 87/292 (29%), Positives = 134/292 (45%)
Query: 30 DTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLR 89
+ I+S RDN++ IW D T+ K L GH+ + + L D ++GS D T+R
Sbjct: 239 EKIISGLRDNSIKIW----DKTSLEC-LKVLTGHTGSV--LCLQYDERVIVTGSSDSTVR 291
Query: 90 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTI--VEDG 147
+WD+ G+ H + VL + FS N +V+ S+D++I +W+ + T+ V G
Sbjct: 292 VWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASATDITLRRVLVG 349
Query: 148 HSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSL 207
H V+ V F + IVSA DR +KVW+ + C+ +GH + + L
Sbjct: 350 HRAAVNVVDFDDKY----IVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RL 403
Query: 208 CASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQ-----KIKL-DISRTLQ 260
SG D LWD+ G L L H +++ + F R KIK+ D+ L
Sbjct: 404 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALD 463
Query: 261 KSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTL 312
P + + T R V + F D QI+SSS D TI +W+ L
Sbjct: 464 PRA----PASTLCLRTLVEHSGR-VFRLQF--DEFQIISSSHDDTILIWDFL 508
Score = 163 (62.4 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 58/191 (30%), Positives = 87/191 (45%)
Query: 2 STETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLK 61
S + LR L GH V + + K+ I+S S D T+ +W + + + L
Sbjct: 337 SATDITLRRVLVGHRAAVNVVDFDDKY---IVSASGDRTIKVWSTSTCEF-----VRTLN 388
Query: 62 GHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 121
GH I+ L +SGS D T+RLWD+ G R E H + V + F DN++I
Sbjct: 389 GHKRGIA--CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRI 444
Query: 122 VSSSRDKTIKLWNTLAH----------CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGW 171
VS + D IK+W+ A C T+VE HS V ++F Q I+S+
Sbjct: 445 VSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVE--HSGRVFRLQFD-EFQ---IISSSH 498
Query: 172 DRMVKVWNLTN 182
D + +W+ N
Sbjct: 499 DDTILIWDFLN 509
Score = 161 (61.7 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 64/247 (25%), Positives = 112/247 (45%)
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
L D +SG D ++++WD + + + HT VL + + D R IV+ S D T++
Sbjct: 234 LQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVR 291
Query: 132 LWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL---TNCKLKI 187
+W+ T++ H++ V +RFS N ++V+ DR + VW++ T+ L+
Sbjct: 292 VWDVNTGEVLNTLIH--HNEAVLHLRFS----NGLMVTCSKDRSIAVWDMASATDITLRR 345
Query: 188 NHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNR 246
GH +N V + ASG D +W + + + TL H I L +
Sbjct: 346 VLVGHRAAVNVVDFDDKYIVSASG--DRTIKVWSTSTCEFVRTLNGHKRGIACLQY---- 399
Query: 247 SFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTI 306
+ +L +S + + + L+ I G V + F DN++IVS + D I
Sbjct: 400 ---RDRLVVSGS-SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKI 453
Query: 307 KLWNTLA 313
K+W+ A
Sbjct: 454 KVWDLQA 460
Score = 37 (18.1 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 355 DGQTLFAGYSDNTIRVWQV 373
D + + +G D I+VW +
Sbjct: 440 DNKRIVSGAYDGKIKVWDL 458
>MGI|MGI:2144023 [details] [associations]
symbol:Fbxw11 "F-box and WD-40 domain protein 11"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=ISO;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006470
"protein dephosphorylation" evidence=IDA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;IDA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;IMP] [GO:0031648 "protein
destabilization" evidence=ISO] [GO:0042347 "negative regulation of
NF-kappaB import into nucleus" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
MGI:MGI:2144023 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 EMBL:AL669951 GO:GO:0042753
EMBL:AL669844 HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362
OrthoDB:EOG4F1X2M GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AY038079 EMBL:AK041532 EMBL:AK149139 EMBL:AK152181
EMBL:AK160086 EMBL:AK166226 EMBL:AK168667 EMBL:BC034261
IPI:IPI00473301 IPI:IPI00474016 IPI:IPI00515142 IPI:IPI00969335
RefSeq:NP_001258276.1 RefSeq:NP_001258277.1 RefSeq:NP_001258278.1
RefSeq:NP_598776.1 UniGene:Mm.28017 UniGene:Mm.474118
ProteinModelPortal:Q5SRY7 SMR:Q5SRY7 DIP:DIP-59921N STRING:Q5SRY7
PhosphoSite:Q5SRY7 PRIDE:Q5SRY7 Ensembl:ENSMUST00000076383
Ensembl:ENSMUST00000093205 Ensembl:ENSMUST00000109366 GeneID:103583
KEGG:mmu:103583 UCSC:uc007ijx.1 UCSC:uc007ijy.1 UCSC:uc007ijz.1
UCSC:uc007ika.1 InParanoid:Q923H0 ChiTaRS:FBXW11 NextBio:356027
Bgee:Q5SRY7 Genevestigator:Q5SRY7 Uniprot:Q5SRY7
Length = 542
Score = 240 (89.5 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 87/292 (29%), Positives = 134/292 (45%)
Query: 30 DTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLR 89
D I+S RDN++ IW D ++ K L GH+ + + L D ++GS D T+R
Sbjct: 251 DKIISGLRDNSIKIW----DKSSLEC-LKVLTGHTGSV--LCLQYDERVIVTGSSDSTVR 303
Query: 90 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTI--VEDG 147
+WD+ G+ H + VL + FS N +V+ S+D++I +W+ + T+ V G
Sbjct: 304 VWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASATDITLRRVLVG 361
Query: 148 HSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSL 207
H V+ V F + IVSA DR +KVW+ + C+ +GH + + L
Sbjct: 362 HRAAVNVVDFDDKY----IVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RL 415
Query: 208 CASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQ-----KIKL-DISRTLQ 260
SG D LWD+ G L L H +++ + F R KIK+ D+ L
Sbjct: 416 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALD 475
Query: 261 KSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTL 312
P + + T R V + F D QI+SSS D TI +W+ L
Sbjct: 476 PRA----PASTLCLRTLVEHSGR-VFRLQF--DEFQIISSSHDDTILIWDFL 520
Score = 163 (62.4 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 58/191 (30%), Positives = 87/191 (45%)
Query: 2 STETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLK 61
S + LR L GH V + + K+ I+S S D T+ +W + + + L
Sbjct: 349 SATDITLRRVLVGHRAAVNVVDFDDKY---IVSASGDRTIKVWSTSTCEF-----VRTLN 400
Query: 62 GHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 121
GH I+ L +SGS D T+RLWD+ G R E H + V + F DN++I
Sbjct: 401 GHKRGIA--CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRI 456
Query: 122 VSSSRDKTIKLWNTLAH----------CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGW 171
VS + D IK+W+ A C T+VE HS V ++F Q I+S+
Sbjct: 457 VSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVE--HSGRVFRLQFD-EFQ---IISSSH 510
Query: 172 DRMVKVWNLTN 182
D + +W+ N
Sbjct: 511 DDTILIWDFLN 521
Score = 163 (62.4 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 64/247 (25%), Positives = 114/247 (46%)
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
L D + +SG D ++++WD ++ + + HT VL + + D R IV+ S D T++
Sbjct: 246 LQYDDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVR 303
Query: 132 LWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL---TNCKLKI 187
+W+ T++ H++ V +RFS N ++V+ DR + VW++ T+ L+
Sbjct: 304 VWDVNTGEVLNTLIH--HNEAVLHLRFS----NGLMVTCSKDRSIAVWDMASATDITLRR 357
Query: 188 NHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNR 246
GH +N V + ASG D +W + + + TL H I L +
Sbjct: 358 VLVGHRAAVNVVDFDDKYIVSASG--DRTIKVWSTSTCEFVRTLNGHKRGIACLQY---- 411
Query: 247 SFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTI 306
+ +L +S + + + L+ I G V + F DN++IVS + D I
Sbjct: 412 ---RDRLVVSGS-SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKI 465
Query: 307 KLWNTLA 313
K+W+ A
Sbjct: 466 KVWDLQA 472
Score = 37 (18.1 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 355 DGQTLFAGYSDNTIRVWQV 373
D + + +G D I+VW +
Sbjct: 452 DNKRIVSGAYDGKIKVWDL 470
>UNIPROTKB|F1PBF1 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 KO:K03362 GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AAEX03003014 RefSeq:XP_866627.1
ProteinModelPortal:F1PBF1 Ensembl:ENSCAFT00000026752 GeneID:479291
KEGG:cfa:479291 Uniprot:F1PBF1
Length = 542
Score = 240 (89.5 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 87/292 (29%), Positives = 134/292 (45%)
Query: 30 DTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLR 89
+ I+S RDN++ IW D T+ K L GH+ + + L D ++GS D T+R
Sbjct: 251 EKIISGLRDNSIKIW----DKTSLEC-LKVLTGHTGSV--LCLQYDERVIVTGSSDSTVR 303
Query: 90 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTI--VEDG 147
+WD+ G+ H + VL + FS N +V+ S+D++I +W+ + T+ V G
Sbjct: 304 VWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASATDITLRRVLVG 361
Query: 148 HSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSL 207
H V+ V F + IVSA DR +KVW+ + C+ +GH + + L
Sbjct: 362 HRAAVNVVDFDDKY----IVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RL 415
Query: 208 CASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQ-----KIKL-DISRTLQ 260
SG D LWD+ G L L H +++ + F R KIK+ D+ L
Sbjct: 416 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALD 475
Query: 261 KSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTL 312
P + + T R V + F D QI+SSS D TI +W+ L
Sbjct: 476 PRA----PASTLCLRTLVEHSGR-VFRLQF--DEFQIISSSHDDTILIWDFL 520
Score = 163 (62.4 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 58/191 (30%), Positives = 87/191 (45%)
Query: 2 STETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLK 61
S + LR L GH V + + K+ I+S S D T+ +W + + + L
Sbjct: 349 SATDITLRRVLVGHRAAVNVVDFDDKY---IVSASGDRTIKVWSTSTCEF-----VRTLN 400
Query: 62 GHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 121
GH I+ L +SGS D T+RLWD+ G R E H + V + F DN++I
Sbjct: 401 GHKRGIA--CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRI 456
Query: 122 VSSSRDKTIKLWNTLAH----------CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGW 171
VS + D IK+W+ A C T+VE HS V ++F Q I+S+
Sbjct: 457 VSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVE--HSGRVFRLQFD-EFQ---IISSSH 510
Query: 172 DRMVKVWNLTN 182
D + +W+ N
Sbjct: 511 DDTILIWDFLN 521
Score = 161 (61.7 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 64/247 (25%), Positives = 112/247 (45%)
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
L D +SG D ++++WD + + + HT VL + + D R IV+ S D T++
Sbjct: 246 LQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVR 303
Query: 132 LWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL---TNCKLKI 187
+W+ T++ H++ V +RFS N ++V+ DR + VW++ T+ L+
Sbjct: 304 VWDVNTGEVLNTLIH--HNEAVLHLRFS----NGLMVTCSKDRSIAVWDMASATDITLRR 357
Query: 188 NHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNR 246
GH +N V + ASG D +W + + + TL H I L +
Sbjct: 358 VLVGHRAAVNVVDFDDKYIVSASG--DRTIKVWSTSTCEFVRTLNGHKRGIACLQY---- 411
Query: 247 SFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTI 306
+ +L +S + + + L+ I G V + F DN++IVS + D I
Sbjct: 412 ---RDRLVVSGS-SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKI 465
Query: 307 KLWNTLA 313
K+W+ A
Sbjct: 466 KVWDLQA 472
Score = 37 (18.1 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 355 DGQTLFAGYSDNTIRVWQV 373
D + + +G D I+VW +
Sbjct: 452 DNKRIVSGAYDGKIKVWDL 470
>UNIPROTKB|Q9UKB1 [details] [associations]
symbol:FBXW11 "F-box/WD repeat-containing protein 11"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;NAS] [GO:0016567
"protein ubiquitination" evidence=IDA;NAS] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0006470 "protein
dephosphorylation" evidence=ISS] [GO:0042753 "positive regulation
of circadian rhythm" evidence=ISS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0031648 "protein destabilization"
evidence=IMP] [GO:0045862 "positive regulation of proteolysis"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0005829
"cytosol" evidence=ISS;TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 Reactome:REACT_6900
GO:GO:0045892 GO:GO:0045893
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway GO:GO:0000209
Pathway_Interaction_DB:hdac_classi_pathway
Pathway_Interaction_DB:nfkappabatypicalpathway
Pathway_Interaction_DB:nfkappabcanonicalpathway GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753 HOGENOM:HOG000006638
HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M EMBL:AF176022
EMBL:AB033279 EMBL:AB033280 EMBL:AB033281 EMBL:AB014596
EMBL:AK314999 EMBL:BC026213 IPI:IPI00301283 IPI:IPI00306671
IPI:IPI00328796 RefSeq:NP_036432.2 RefSeq:NP_387448.2
RefSeq:NP_387449.2 UniGene:Hs.484138 ProteinModelPortal:Q9UKB1
SMR:Q9UKB1 DIP:DIP-27593N IntAct:Q9UKB1 MINT:MINT-120522
STRING:Q9UKB1 PhosphoSite:Q9UKB1 DMDM:13124267 PRIDE:Q9UKB1
DNASU:23291 Ensembl:ENST00000265094 Ensembl:ENST00000296933
Ensembl:ENST00000393802 GeneID:23291 KEGG:hsa:23291 UCSC:uc003mbl.1
UCSC:uc003mbm.1 UCSC:uc003mbn.1 CTD:23291 GeneCards:GC05M171288
HGNC:HGNC:13607 MIM:605651 neXtProt:NX_Q9UKB1 PharmGKB:PA28050
InParanoid:Q9UKB1 OMA:FDQWSEA PhylomeDB:Q9UKB1
Pathway_Interaction_DB:nfkappabalternativepathway GenomeRNAi:23291
NextBio:45108 ArrayExpress:Q9UKB1 Bgee:Q9UKB1 CleanEx:HS_FBXW11
Genevestigator:Q9UKB1 GermOnline:ENSG00000072803 Uniprot:Q9UKB1
Length = 542
Score = 240 (89.5 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 87/292 (29%), Positives = 134/292 (45%)
Query: 30 DTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLR 89
+ I+S RDN++ IW D T+ K L GH+ + + L D ++GS D T+R
Sbjct: 251 EKIISGLRDNSIKIW----DKTSLEC-LKVLTGHTGSV--LCLQYDERVIVTGSSDSTVR 303
Query: 90 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTI--VEDG 147
+WD+ G+ H + VL + FS N +V+ S+D++I +W+ + T+ V G
Sbjct: 304 VWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASATDITLRRVLVG 361
Query: 148 HSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSL 207
H V+ V F + IVSA DR +KVW+ + C+ +GH + + L
Sbjct: 362 HRAAVNVVDFDDKY----IVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RL 415
Query: 208 CASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQ-----KIKL-DISRTLQ 260
SG D LWD+ G L L H +++ + F R KIK+ D+ L
Sbjct: 416 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALD 475
Query: 261 KSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTL 312
P + + T R V + F D QI+SSS D TI +W+ L
Sbjct: 476 PRA----PASTLCLRTLVEHSGR-VFRLQF--DEFQIISSSHDDTILIWDFL 520
Score = 163 (62.4 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 58/191 (30%), Positives = 87/191 (45%)
Query: 2 STETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLK 61
S + LR L GH V + + K+ I+S S D T+ +W + + + L
Sbjct: 349 SATDITLRRVLVGHRAAVNVVDFDDKY---IVSASGDRTIKVWSTSTCEF-----VRTLN 400
Query: 62 GHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 121
GH I+ L +SGS D T+RLWD+ G R E H + V + F DN++I
Sbjct: 401 GHKRGIA--CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRI 456
Query: 122 VSSSRDKTIKLWNTLAH----------CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGW 171
VS + D IK+W+ A C T+VE HS V ++F Q I+S+
Sbjct: 457 VSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVE--HSGRVFRLQFD-EFQ---IISSSH 510
Query: 172 DRMVKVWNLTN 182
D + +W+ N
Sbjct: 511 DDTILIWDFLN 521
Score = 161 (61.7 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 64/247 (25%), Positives = 112/247 (45%)
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
L D +SG D ++++WD + + + HT VL + + D R IV+ S D T++
Sbjct: 246 LQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVR 303
Query: 132 LWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL---TNCKLKI 187
+W+ T++ H++ V +RFS N ++V+ DR + VW++ T+ L+
Sbjct: 304 VWDVNTGEVLNTLIH--HNEAVLHLRFS----NGLMVTCSKDRSIAVWDMASATDITLRR 357
Query: 188 NHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNR 246
GH +N V + ASG D +W + + + TL H I L +
Sbjct: 358 VLVGHRAAVNVVDFDDKYIVSASG--DRTIKVWSTSTCEFVRTLNGHKRGIACLQY---- 411
Query: 247 SFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTI 306
+ +L +S + + + L+ I G V + F DN++IVS + D I
Sbjct: 412 ---RDRLVVSGS-SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKI 465
Query: 307 KLWNTLA 313
K+W+ A
Sbjct: 466 KVWDLQA 472
Score = 37 (18.1 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 355 DGQTLFAGYSDNTIRVWQV 373
D + + +G D I+VW +
Sbjct: 452 DNKRIVSGAYDGKIKVWDL 470
>UNIPROTKB|F1SLU8 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:NMCSIYS EMBL:FP325257
Ensembl:ENSSSCT00000000743 Uniprot:F1SLU8
Length = 340
Score = 205 (77.2 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 64/247 (25%), Positives = 111/247 (44%)
Query: 6 LQLRGTLNGHNGWVTQI--ATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGH 63
++ R TL GH + + AT+ K ++S S+D LI+W + + +P +
Sbjct: 45 MRTRRTLRGHLAKIYAMHWATDSKL---LVSASQDGKLIVWDTYTTNKVHAIPLR----- 96
Query: 64 SHFISDIVLSSDGNYALSGSWDKTLRLWDLAA--G--KTTRRFEDHTKDVLSVAFSVDNR 119
S ++ + GN+ G D ++ L + G K +R HT LS +D+
Sbjct: 97 SSWVMTCAYAPSGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHT-GYLSCCRFLDDN 155
Query: 120 QIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
IV+SS D T LW+ + T+ GH+ + SP+ + + +S D K+W+
Sbjct: 156 NIVTSSGDTTCALWDIETGQQKTVFV-GHTGDCMSLAVSPDFK--LFISGACDASAKLWD 212
Query: 180 LTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDII-- 237
+ + +GH +N + P+G +G D + L+DL + L T H II
Sbjct: 213 VREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTTYSHESIICG 272
Query: 238 -TALCFS 243
T++ FS
Sbjct: 273 ITSVAFS 279
Score = 205 (77.2 bits), Expect = 9.2e-15, Sum P(2) = 9.2e-15
Identities = 64/262 (24%), Positives = 115/262 (43%)
Query: 57 QKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 116
++ L+GH I + ++D +S S D L +WD + V++ A++
Sbjct: 48 RRTLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAP 107
Query: 117 DNRQIVSSSRDKTIKLWNTLA---HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDR 173
+ D +++ + + K + H+ ++SC RF + N I+ S+G D
Sbjct: 108 SGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDD--NNIVTSSG-DT 164
Query: 174 MVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV- 232
+W++ + K GHTG ++ VSPD L SG D +A LWD+ +G T
Sbjct: 165 TCALWDIETGQQKTVFVGHTGDCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQTFTG 224
Query: 233 HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFF--SLFRDVLSVAF 290
H I A+CF PN I ++ L+ + + T + S+ + SVAF
Sbjct: 225 HESDINAICFFPNGEA------ICTGSDDASCRLFDLRADQELTTYSHESIICGITSVAF 278
Query: 291 SVDNRQIVSSSRDKTIKLWNTL 312
S+ R + + D +W+++
Sbjct: 279 SLSGRLLFAGYDDFNCNVWDSM 300
Score = 187 (70.9 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 62/230 (26%), Positives = 103/230 (44%)
Query: 16 NGWVTQIATNPKFPDTILSCSR-DNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSS 74
+ WV A P ++C DN I+ L + N V + L H+ ++S
Sbjct: 97 SSWVMTCAYAPS--GNFVACGGLDNMCSIYSLKSREGNVKV-SRELSAHTGYLSCCRFLD 153
Query: 75 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 134
D N S S D T LWD+ G+ F HT D +S+A S D + +S + D + KLW+
Sbjct: 154 DNNIVTS-SGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDFKLFISGACDASAKLWD 212
Query: 135 TL-AHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL-TNCKLKI-NHSG 191
C+ T GH ++ + F PN + I + D ++++L + +L +H
Sbjct: 213 VREGTCRQTFT--GHESDINAICFFPNGE--AICTGSDDASCRLFDLRADQELTTYSHES 268
Query: 192 HTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITAL 240
+ +V S G L +G D N +WD + + TL H++ ++ L
Sbjct: 269 IICGITSVAFSLSGRLLFAGYDDFNCNVWDSMKCERVGTLSGHDNRVSCL 318
Score = 179 (68.1 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 57/233 (24%), Positives = 100/233 (42%)
Query: 97 KTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVR 156
+T R H + ++ ++ D++ +VS+S+D + +W+T K + S WV
Sbjct: 46 RTRRTLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPL-RSSWVMTCA 104
Query: 157 FSPNHQNPIIVSAGWDRMVKVWNLT----NCKLKINHSGHTGYLNTVTVSPDGSLCASGG 212
++P+ + G D M +++L N K+ S HTGYL+ D ++ S G
Sbjct: 105 YAPSGN--FVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSG 162
Query: 213 KDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINH 271
D LWD+ G+ V H +L SP+ KL IS S L+ +
Sbjct: 163 -DTTCALWDIETGQQKTVFVGHTGDCMSLAVSPD-----FKLFISGACDASAK-LWDVRE 215
Query: 272 GKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLET 324
G F D+ ++ F + I + S D + +L++ A + T E+
Sbjct: 216 GTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTTYSHES 268
Score = 170 (64.9 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 49/178 (27%), Positives = 81/178 (45%)
Query: 4 ETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGH 63
ET Q + GH G +A +P F +S + D + +W D G ++ GH
Sbjct: 172 ETGQQKTVFVGHTGDCMSLAVSPDFK-LFISGACDASAKLW-----DVREGTCRQTFTGH 225
Query: 64 SHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGK--TTRRFEDHTKDVLSVAFSVDNRQI 121
I+ I +G +GS D + RL+DL A + TT E + SVAFS+ R +
Sbjct: 226 ESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTTYSHESIICGITSVAFSLSGRLL 285
Query: 122 VSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
+ D +W+++ C+ GH + VSC+ + + + + WD +K+WN
Sbjct: 286 FAGYDDFNCNVWDSMK-CERVGTLSGHDNRVSCLGVTADGM--AVATGSWDSFLKIWN 340
Score = 167 (63.8 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 52/214 (24%), Positives = 97/214 (45%)
Query: 12 LNGHNGWVTQIATNPKFPD--TILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISD 69
L+ H G+++ +F D I++ S D T +W D G + GH+
Sbjct: 139 LSAHTGYLSCC----RFLDDNNIVTSSGDTTCALW-----DIETGQQKTVFVGHTGDCMS 189
Query: 70 IVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKT 129
+ +S D +SG+ D + +LWD+ G + F H D+ ++ F + I + S D +
Sbjct: 190 LAVSPDFKLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDAS 249
Query: 130 IKLWNTLAHCKFTIVE-DGHSDWVSCVRFSPNHQNPIIVSAGWDRM-VKVWNLTNCKLKI 187
+L++ A + T + ++ V FS + + ++ AG+D VW+ C+
Sbjct: 250 CRLFDLRADQELTTYSHESIICGITSVAFSLSGR---LLFAGYDDFNCNVWDSMKCERVG 306
Query: 188 NHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWD 221
SGH ++ + V+ DG A+G D +W+
Sbjct: 307 TLSGHDNRVSCLGVTADGMAVATGSWDSFLKIWN 340
Score = 67 (28.6 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 18/53 (33%), Positives = 25/53 (47%)
Query: 330 ELRPDVVSQSTKADPPMC--LSLAWSTDGQTLFAGYSDNTIRVWQVSVTSRGG 380
+LR D + + +C S+A+S G+ LFAGY D VW R G
Sbjct: 254 DLRADQELTTYSHESIICGITSVAFSLSGRLLFAGYDDFNCNVWDSMKCERVG 306
Score = 41 (19.5 bits), Expect = 5.7e-15, Sum P(2) = 5.7e-15
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 285 VLSVAFSVDNRQIVSSSRDKTIKLWN 310
V + + D + + S D +K+WN
Sbjct: 315 VSCLGVTADGMAVATGSWDSFLKIWN 340
Score = 39 (18.8 bits), Expect = 9.2e-15, Sum P(2) = 9.2e-15
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 347 CLSLAWSTDGQTLFAGYSDNTIRVW 371
CL + + DG + G D+ +++W
Sbjct: 317 CLGV--TADGMAVATGSWDSFLKIW 339
>UNIPROTKB|P16520 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0043005
"neuron projection" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0003924 "GTPase activity" evidence=TAS] [GO:0008217 "regulation
of blood pressure" evidence=TAS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=TAS] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0006112 "energy reserve metabolic
process" evidence=TAS] [GO:0007268 "synaptic transmission"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0071377 "cellular response to glucagon stimulus"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0006112 GO:GO:0004871 GO:GO:0008217 GO:GO:0071377
Pathway_Interaction_DB:cone_pathway EMBL:U47924 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 HPA:HPA040736 CTD:2784 KO:K07825 EMBL:M31328
EMBL:U47930 EMBL:Y12050 EMBL:Y12051 EMBL:Y12052 EMBL:Y12053
EMBL:Y12054 EMBL:Y12055 EMBL:Y12056 EMBL:Y12057 EMBL:Y12058
EMBL:AF501884 EMBL:BT009800 EMBL:AY631872 EMBL:BC000115
EMBL:BC002454 IPI:IPI00029143 PIR:A35096 RefSeq:NP_002066.1
UniGene:Hs.631657 ProteinModelPortal:P16520 SMR:P16520 DIP:DIP-601N
IntAct:P16520 STRING:P16520 PhosphoSite:P16520 DMDM:121011
OGP:P16520 PaxDb:P16520 PRIDE:P16520 DNASU:2784
Ensembl:ENST00000229264 GeneID:2784 KEGG:hsa:2784 UCSC:uc001qrc.3
GeneCards:GC12P007021 HGNC:HGNC:4400 HPA:HPA005645 MIM:139130
neXtProt:NX_P16520 PharmGKB:PA176 InParanoid:P16520 OMA:NMCSIYS
OrthoDB:EOG4J118C PhylomeDB:P16520 ChiTaRS:GNB3 GenomeRNAi:2784
NextBio:10967 ArrayExpress:P16520 Bgee:P16520 CleanEx:HS_GNB3
Genevestigator:P16520 GermOnline:ENSG00000111664 Uniprot:P16520
Length = 340
Score = 205 (77.2 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 65/262 (24%), Positives = 115/262 (43%)
Query: 57 QKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 116
++ L+GH I + ++D +S S D L +WD + V++ A++
Sbjct: 48 RRTLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAP 107
Query: 117 DNRQIVSSSRDKTIKLWNTLA---HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDR 173
+ D ++N + + K + H+ ++SC RF + N I+ S+G D
Sbjct: 108 SGNFVACGGLDNMCSIYNLKSREGNVKVSRELSAHTGYLSCCRFLDD--NNIVTSSG-DT 164
Query: 174 MVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV- 232
+W++ + K GHTG ++ VSPD +L SG D +A LWD+ +G T
Sbjct: 165 TCALWDIETGQQKTVFVGHTGDCMSLAVSPDFNLFISGACDASAKLWDVREGTCRQTFTG 224
Query: 233 HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFF--SLFRDVLSVAF 290
H I A+CF PN I ++ L+ + + F S+ + SVAF
Sbjct: 225 HESDINAICFFPNGEA------ICTGSDDASCRLFDLRADQELICFSHESIICGITSVAF 278
Query: 291 SVDNRQIVSSSRDKTIKLWNTL 312
S+ R + + D +W+++
Sbjct: 279 SLSGRLLFAGYDDFNCNVWDSM 300
Score = 193 (73.0 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 70/311 (22%), Positives = 127/311 (40%)
Query: 6 LQLRGTLNGHNGWVTQI--ATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGH 63
++ R TL GH + + AT+ K ++S S+D LI+W + + +P +
Sbjct: 45 MRTRRTLRGHLAKIYAMHWATDSKL---LVSASQDGKLIVWDSYTTNKVHAIPLR----- 96
Query: 64 SHFISDIVLSSDGNYALSGSWDKTLRLWDLAA--G--KTTRRFEDHTKDVLSVAFSVDNR 119
S ++ + GN+ G D +++L + G K +R HT LS +D+
Sbjct: 97 SSWVMTCAYAPSGNFVACGGLDNMCSIYNLKSREGNVKVSRELSAHT-GYLSCCRFLDDN 155
Query: 120 QIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
IV+SS D T LW+ + T+ GH+ + SP+ + +S D K+W+
Sbjct: 156 NIVTSSGDTTCALWDIETGQQKTVFV-GHTGDCMSLAVSPDFN--LFISGACDASAKLWD 212
Query: 180 LTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITA 239
+ + +GH +N + P+G +G D + L+DL + L H II
Sbjct: 213 VREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELICFSHESII-- 270
Query: 240 LCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVS 299
C + +F + N ++ + V + + D + +
Sbjct: 271 -CGITSVAFSLSGRLLFAGYDDFNCNVWDSMKSERVGILSGHDNRVSCLGVTADGMAVAT 329
Query: 300 SSRDKTIKLWN 310
S D +K+WN
Sbjct: 330 GSWDSFLKIWN 340
Score = 172 (65.6 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 54/222 (24%), Positives = 95/222 (42%)
Query: 97 KTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVR 156
+T R H + ++ ++ D++ +VS+S+D + +W++ K + S WV
Sbjct: 46 RTRRTLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDSYTTNKVHAIPL-RSSWVMTCA 104
Query: 157 FSPNHQNPIIVSAGWDRMVKVWNLT----NCKLKINHSGHTGYLNTVTVSPDGSLCASGG 212
++P+ + G D M ++NL N K+ S HTGYL+ D ++ S G
Sbjct: 105 YAPSGN--FVACGGLDNMCSIYNLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSG 162
Query: 213 KDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINH 271
D LWD+ G+ V H +L SP+ L IS S L+ +
Sbjct: 163 -DTTCALWDIETGQQKTVFVGHTGDCMSLAVSPD-----FNLFISGACDASAK-LWDVRE 215
Query: 272 GKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA 313
G F D+ ++ F + I + S D + +L++ A
Sbjct: 216 GTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRA 257
Score = 163 (62.4 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 48/178 (26%), Positives = 82/178 (46%)
Query: 4 ETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGH 63
ET Q + GH G +A +P F + +S + D + +W D G ++ GH
Sbjct: 172 ETGQQKTVFVGHTGDCMSLAVSPDF-NLFISGACDASAKLW-----DVREGTCRQTFTGH 225
Query: 64 SHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF--EDHTKDVLSVAFSVDNRQI 121
I+ I +G +GS D + RL+DL A + F E + SVAFS+ R +
Sbjct: 226 ESDINAICFFPNGEAICTGSDDASCRLFDLRADQELICFSHESIICGITSVAFSLSGRLL 285
Query: 122 VSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
+ D +W+++ + I+ GH + VSC+ + + + + WD +K+WN
Sbjct: 286 FAGYDDFNCNVWDSMKSERVGILS-GHDNRVSCLGVTADGM--AVATGSWDSFLKIWN 340
Score = 88 (36.0 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 36/162 (22%), Positives = 69/162 (42%)
Query: 165 IIVSAGWDRMVKVWNLTNCKLKINHSG-HTGYLNTVTVSPDGSLCASGGKDMNAMLWDLN 223
++VSA D + VW+ K++ + ++ T +P G+ A GG D +++L
Sbjct: 69 LLVSASQDGKLIVWDSYTTN-KVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCSIYNLK 127
Query: 224 DGKHLHTLVHNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFR 283
+ + V ++ + F +I + + L+ I G+ +T F
Sbjct: 128 S-REGNVKVSRELSAHTGYLSCCRFLDDN-NIVTSSGDTTCALWDIETGQQKTVFVGHTG 185
Query: 284 DVLSVAFSVDNRQIVSSSRDKTIKLWNTL-AHCKFTIVDLET 324
D +S+A S D +S + D + KLW+ C+ T E+
Sbjct: 186 DCMSLAVSPDFNLFISGACDASAKLWDVREGTCRQTFTGHES 227
Score = 67 (28.6 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 14/32 (43%), Positives = 18/32 (56%)
Query: 349 SLAWSTDGQTLFAGYSDNTIRVWQVSVTSRGG 380
S+A+S G+ LFAGY D VW + R G
Sbjct: 275 SVAFSLSGRLLFAGYDDFNCNVWDSMKSERVG 306
Score = 39 (18.8 bits), Expect = 9.2e-15, Sum P(2) = 9.2e-15
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 347 CLSLAWSTDGQTLFAGYSDNTIRVW 371
CL + + DG + G D+ +++W
Sbjct: 317 CLGV--TADGMAVATGSWDSFLKIW 339
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 242 (90.2 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 67/217 (30%), Positives = 107/217 (49%)
Query: 14 GHNGWVTQIATNPK----FPDTILSCSRDNTLIIW----KLTRDD-TNYGVPQKRLKGHS 64
GH VT +A P +P + S S+D TL + +L + D +N V +K H
Sbjct: 408 GHTASVTAVALGPLDVNGYPTFLASSSQDRTLKRFNLGSQLNKSDFSNRAV--WTIKAHD 465
Query: 65 HFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSS 124
++ I +S DG S S DKT++LWD + G+ H + V + +F+ +RQ+ S
Sbjct: 466 RDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASG 525
Query: 125 SRDKTIKLWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNC 183
S D+TI++WN C T+ +GH+ + ++ Q +VSA D +VKVW+L++
Sbjct: 526 SGDRTIRIWNVDTQQCVQTL--EGHTGAI--LKLIYISQGTQVVSAAADGLVKVWSLSSG 581
Query: 184 KLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLW 220
+ H + + DGSL SGG D +W
Sbjct: 582 ECVATLDNHEDRVWALASRFDGSLLVSGGADAVVSVW 618
Score = 216 (81.1 bits), Expect = 8.2e-15, Sum P(2) = 8.2e-15
Identities = 69/254 (27%), Positives = 118/254 (46%)
Query: 1 MSTETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRL 60
+ST+ Q+ G L GH V + ++ + + ++DNT+ +W L +D Y
Sbjct: 349 ISTDGTQVFGVLEGHTDIVLTLDSSEDGV-WLATGAKDNTVRLWNLNIEDNVYKCIHV-F 406
Query: 61 KGHSHFISDIVLSS-DGN----YALSGSWDKTLRLWDLAAGKTTRRFED--------HTK 107
GH+ ++ + L D N + S S D+TL+ ++L + F + H +
Sbjct: 407 TGHTASVTAVALGPLDVNGYPTFLASSSQDRTLKRFNLGSQLNKSDFSNRAVWTIKAHDR 466
Query: 108 DVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIV 167
DV ++ S D R I S+S+DKTIKLW++ ++ GH V F+P + +
Sbjct: 467 DVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLR-GHRRGVWACSFNPFSRQ--LA 523
Query: 168 SAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKH 227
S DR +++WN+ + GHTG + + G+ S D +W L+ G+
Sbjct: 524 SGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSGEC 583
Query: 228 LHTLV-HNDIITAL 240
+ TL H D + AL
Sbjct: 584 VATLDNHEDRVWAL 597
Score = 176 (67.0 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 43/207 (20%), Positives = 96/207 (46%)
Query: 61 KGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ 120
K +++ + ++SD ++ + L ++++ +G+ + + H V+++ N
Sbjct: 58 KDEDDYVTALAITSDSKKLIAAFRSRLLTIYEIPSGRRIKSMKAHETPVITMTIDPTNTL 117
Query: 121 IVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWD-RMVKVWN 179
+ + + +K+W+ +A T GH +S + F HQN ++++G D V++W+
Sbjct: 118 LATGGAEGLVKVWD-IAGAYVTHSFRGHGGVISALCFG-KHQNTWVLASGADDSRVRLWD 175
Query: 180 LTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITA 239
L + + GH+ + +T P GS SG +D +W++ + T+ + A
Sbjct: 176 LNSSRSMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIKKRSAVRTIPVFHSVEA 235
Query: 240 LCFSPNRSFQKIKLDISRTLQKSNLIL 266
+ + + +KI T + NLIL
Sbjct: 236 IGWVNGQPEEKILY----TAGEGNLIL 258
Score = 163 (62.4 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 84/346 (24%), Positives = 152/346 (43%)
Query: 30 DTILSCSRDNTLIIWKLTRDDTN-YGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTL 88
D + CS NT I ++ D T +GV L+GH+ + + S DG + +G+ D T+
Sbjct: 335 DHLAVCS--NTEFIDVISTDGTQVFGV----LEGHTDIVLTLDSSEDGVWLATGAKDNTV 388
Query: 89 RLWDLAAG----KTTRRFEDHTKDVLSVAFS-VD-NRQ---IVSSSRDKTIKLWNT---L 136
RLW+L K F HT V +VA +D N + SSS+D+T+K +N L
Sbjct: 389 RLWNLNIEDNVYKCIHVFTGHTASVTAVALGPLDVNGYPTFLASSSQDRTLKRFNLGSQL 448
Query: 137 AHCKFTI----VEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGH 192
F+ H V+ ++ S + + II SA D+ +K+W+ + ++ GH
Sbjct: 449 NKSDFSNRAVWTIKAHDRDVNAIQVSKDGR--IIASASQDKTIKLWDSSTGEVVGVLRGH 506
Query: 193 TGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKI 251
+ + +P ASG D +W+++ + + TL H I L + ++ Q +
Sbjct: 507 RRGVWACSFNPFSRQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYI-SQGTQVV 565
Query: 252 KLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWN- 310
++ ++ ++ G+ + V ++A D +VS D + +W
Sbjct: 566 SAAADGLVK-----VWSLSSGECVATLDNHEDRVWALASRFDGSLLVSGGADAVVSVWKD 620
Query: 311 -TLAHCKFTIVDLETKKMVEELRPDVVSQSTKADPPMCLSLAWSTD 355
T + +LE + E+L + + T+ D ++LA S D
Sbjct: 621 VTEEYIAKQAEELERRVEAEQLLSNF--EQTE-DWQQAIALALSLD 663
Score = 155 (59.6 bits), Expect = 8.3e-08, Sum P(2) = 8.3e-08
Identities = 62/249 (24%), Positives = 112/249 (44%)
Query: 31 TILSCSRDNTLIIWKL-TRDDTNYGVPQ-KRLKG-HSHFISDIVLSSDGNYAL--SGSWD 85
T L+ + D+ +I +R T Y +P +R+K +H I ++ D L +G +
Sbjct: 65 TALAITSDSKKLIAAFRSRLLTIYEIPSGRRIKSMKAHETPVITMTIDPTNTLLATGGAE 124
Query: 86 KTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV-DNRQIVSSSRDKT-IKLWNTLAHCKFTI 143
+++WD+A T F H + ++ F N +++S D + ++LW+ L +
Sbjct: 125 GLVKVWDIAGAYVTHSFRGHGGVISALCFGKHQNTWVLASGADDSRVRLWD-LNSSRSMA 183
Query: 144 VEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCK----LKINHSGHT-GYLNT 198
V +GHS + + F P ++S D+ V+VWN+ + + HS G++N
Sbjct: 184 VFEGHSSVIRGLTFEPT--GSFLLSGSRDKTVQVWNIKKRSAVRTIPVFHSVEAIGWVNG 241
Query: 199 VTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV---H---NDIITALCFSPNRSFQKIK 252
P+ + + G+ + WD G L V H N II + FS N + +
Sbjct: 242 ---QPEEKILYTAGEGNLILAWDWKSGSRLDPGVDTTHSETNAIIQVVPFSEN-TLLSVH 297
Query: 253 LDISRTLQK 261
D+S L+K
Sbjct: 298 SDLSLLLRK 306
Score = 154 (59.3 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 43/200 (21%), Positives = 96/200 (48%)
Query: 112 VAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGW 171
VAF + + +V++ D+ I + F+I +D D+V+ + + + + +++A
Sbjct: 25 VAFDSNEKILVTALTDRIIGTRSETGERLFSIKKD-EDDYVTALAITSDSKK--LIAAFR 81
Query: 172 DRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTL 231
R++ ++ + + + + H + T+T+ P +L A+GG + +WD+ H+
Sbjct: 82 SRLLTIYEIPSGRRIKSMKAHETPVITMTIDPTNTLLATGGAEGLVKVWDIAGAYVTHSF 141
Query: 232 V-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAF 290
H +I+ALCF +++ + + S + L+ +N + F + + F
Sbjct: 142 RGHGGVISALCFGKHQNTWVL----ASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTF 197
Query: 291 SVDNRQIVSSSRDKTIKLWN 310
++S SRDKT+++WN
Sbjct: 198 EPTGSFLLSGSRDKTVQVWN 217
Score = 150 (57.9 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 80/320 (25%), Positives = 135/320 (42%)
Query: 14 GHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISD---- 69
GH+ + + P +LS SRD T+ +W + + +P +++
Sbjct: 187 GHSSVIRGLTFEPT-GSFLLSGSRDKTVQVWNIKKRSAVRTIPVFHSVEAIGWVNGQPEE 245
Query: 70 --IVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRD 127
+ + +GN L+ W RL D G T E T ++ V +N ++S D
Sbjct: 246 KILYTAGEGNLILAWDWKSGSRL-D--PGVDTTHSE--TNAIIQVVPFSENT-LLSVHSD 299
Query: 128 KTIKLWNTLAHCKFTIVE--DGHSDWV-SCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCK 184
++ L + F ++ +G D V C +H + V + + + V + +
Sbjct: 300 LSLLLRKRVPGEGFITIKKLNGSFDEVIDCAWIGDDH---LAVCSNTE-FIDVISTDGTQ 355
Query: 185 LKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLN--DG--KHLHTLV-HNDIITA 239
+ GHT + T+ S DG A+G KD LW+LN D K +H H +TA
Sbjct: 356 VFGVLEGHTDIVLTLDSSEDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTA 415
Query: 240 LCFSPN--RSFQKIKLDIS--RTLQKSNLILYPINHGKMET-PFFSLF---RDVLSVAFS 291
+ P + S RTL++ NL +N +++ RDV ++ S
Sbjct: 416 VALGPLDVNGYPTFLASSSQDRTLKRFNLGSQ-LNKSDFSNRAVWTIKAHDRDVNAIQVS 474
Query: 292 VDNRQIVSSSRDKTIKLWNT 311
D R I S+S+DKTIKLW++
Sbjct: 475 KDGRIIASASQDKTIKLWDS 494
Score = 124 (48.7 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 86/380 (22%), Positives = 159/380 (41%)
Query: 17 GWVTQIATNPKFPDTILSCSRDNTLII---WKL-TRDDTNYGVPQKRLKGHSHFISDIVL 72
GWV N + + IL + + LI+ WK +R D GV ++ I +V
Sbjct: 237 GWV-----NGQPEEKILYTAGEGNLILAWDWKSGSRLDP--GVDTTH--SETNAIIQVVP 287
Query: 73 SSDGNYALSGSWDKTLRLWDLAAGK---TTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKT 129
S+ N LS D +L L G+ T ++ +V+ A+ D+ V S+ +
Sbjct: 288 FSE-NTLLSVHSDLSLLLRKRVPGEGFITIKKLNGSFDEVIDCAWIGDDHLAVCSNTE-F 345
Query: 130 IKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT--NCKLKI 187
I + +T F ++E GH+D V + + + + D V++WNL + K
Sbjct: 346 IDVISTDGTQVFGVLE-GHTDIV--LTLDSSEDGVWLATGAKDNTVRLWNLNIEDNVYKC 402
Query: 188 NH--SGHTGYLNTVTVSP---DG--SLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITAL 240
H +GHT + V + P +G + AS +D ++L + + + T
Sbjct: 403 IHVFTGHTASVTAVALGPLDVNGYPTFLASSSQDRTLKRFNLGSQLNKSDFSNRAVWTIK 462
Query: 241 CFSPNRSFQKIKLD---ISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQI 297
+ + ++ D I+ Q + L+ + G++ R V + +F+ +RQ+
Sbjct: 463 AHDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQL 522
Query: 298 VSSSRDKTIKLWNT-LAHCKFTIVDLETKKMVEELRPDVVSQSTKADPPMCLSLA--WST 354
S S D+TI++WN C T+ + T +++ + +SQ T+ L WS
Sbjct: 523 ASGSGDRTIRIWNVDTQQCVQTL-EGHTGAILKLI---YISQGTQVVSAAADGLVKVWSL 578
Query: 355 DGQTLFAGYSDNTIRVWQVS 374
A ++ RVW ++
Sbjct: 579 SSGECVATLDNHEDRVWALA 598
Score = 63 (27.2 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 348 LSLAWSTDGQTLFAGYSDNTIRVWQVSV 375
L+L S DG L G DNT+R+W +++
Sbjct: 368 LTLDSSEDGVWLATGAKDNTVRLWNLNI 395
Score = 44 (20.5 bits), Expect = 8.2e-15, Sum P(2) = 8.2e-15
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 349 SLAWSTDGQTLFAGYSDNTIRVWQ 372
+LA DG L +G +D + VW+
Sbjct: 596 ALASRFDGSLLVSGGADAVVSVWK 619
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 213 (80.0 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 50/151 (33%), Positives = 78/151 (51%)
Query: 30 DTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLR 89
+ ++S S D LI+W D P ++ GH ++ S DG + S+D ++R
Sbjct: 359 ERLVSASDDLQLILW----DPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDSSVR 414
Query: 90 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAH-CKFTIVEDGH 148
LWD GK H V A+S D+R +VSSS+D T+K+W+ + KF + GH
Sbjct: 415 LWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKKMKFDL--PGH 472
Query: 149 SDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
D V V +SP+ Q + S G D+ V++W+
Sbjct: 473 EDQVFAVDWSPDGQR--VASGGADKAVRIWS 501
Score = 211 (79.3 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 58/213 (27%), Positives = 107/213 (50%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
++NGH+G + +P +++ S D T +W DT P +KGH++++S +
Sbjct: 129 SMNGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDC---DTQ--TPIATMKGHTNWVSCV 183
Query: 71 VLSSDGNYALSGSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAF-----SVDNRQ--IV 122
+ D + +GS D T+R WD G HTK ++++ + + D+ +
Sbjct: 184 AWAPDASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLA 243
Query: 123 SSSRDKTIKLWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT 181
S S+D T+++WN L FT+ GH+ ++CVR+ QN I S+ +D+ +++W+
Sbjct: 244 SGSKDNTVRIWNVKLRTLLFTL--SGHTAPITCVRWGG--QN-WIYSSSYDKTIRIWDAK 298
Query: 182 NCKLKINHSGHTGYLNTVTVSPDGSLCASGGKD 214
+ K GH +N +++S + L SG D
Sbjct: 299 DGKCLHILKGHAARVNHLSLSTEHVL-RSGAYD 330
Score = 208 (78.3 bits), Expect = 3.0e-17, Sum P(2) = 3.0e-17
Identities = 90/337 (26%), Positives = 140/337 (41%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVP-QKRLKGHSHFISD 69
T+ GH WV+ +A P I + S DNT+ W D G P L+ H+ I
Sbjct: 172 TMKGHTNWVSCVAWAPD-ASIIATGSMDNTIRFW-----DPKKGSPIGDALRRHTKPIMA 225
Query: 70 IV-----LSSD-GNYAL-SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 122
+ L+ D G Y L SGS D T+R+W++ HT + V + N I
Sbjct: 226 LCWQPLHLAPDSGPYLLASGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRWGGQN-WIY 284
Query: 123 SSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRM-VKVWNLT 181
SSS DKTI++W+ K + GH+ V+ + S H ++ S +D K + +
Sbjct: 285 SSSYDKTIRIWDA-KDGKCLHILKGHAARVNHLSLSTEH---VLRSGAYDHTDFKPKSFS 340
Query: 182 NCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHND--IITA 239
+ + K Y + G S D+ +LWD T +H ++
Sbjct: 341 DERRKAKER----Y--EACLKQSGERLVSASDDLQLILWDPQKSTKPITKMHGHQKVVNH 394
Query: 240 LCFSPN-RSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIV 298
FSP+ R D S++ L+ GK V A+S D+R +V
Sbjct: 395 ASFSPDGRCIATASFD-------SSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLV 447
Query: 299 SSSRDKTIKLWNTLAH-CKFTIVDLETKKMVEELRPD 334
SSS+D T+K+W+ + KF + E + + PD
Sbjct: 448 SSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSPD 484
Score = 182 (69.1 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 49/150 (32%), Positives = 73/150 (48%)
Query: 72 LSSDGNYALSGSWDKTLRLWD-LAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 130
L G +S S D L LWD + K + H K V +FS D R I ++S D ++
Sbjct: 354 LKQSGERLVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDSSV 413
Query: 131 KLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS 190
+LW+ KF GH V +S + + ++VS+ D +KVW++ + K+K +
Sbjct: 414 RLWDGKTG-KFLATLRGHVAAVYQCAWSTDSR--LLVSSSQDTTLKVWDVRSKKMKFDLP 470
Query: 191 GHTGYLNTVTVSPDGSLCASGGKDMNAMLW 220
GH + V SPDG ASGG D +W
Sbjct: 471 GHEDQVFAVDWSPDGQRVASGGADKAVRIW 500
Score = 166 (63.5 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 50/178 (28%), Positives = 73/178 (41%)
Query: 60 LKGHSHFISDIVLS-SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN 118
+ GH I S S + ++GS D T RLWD + HT V VA++ D
Sbjct: 130 MNGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAWAPDA 189
Query: 119 RQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNP-----IIVSAGWDR 173
I + S D TI+ W+ H+ + + + P H P ++ S D
Sbjct: 190 SIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDN 249
Query: 174 MVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTL 231
V++WN+ L SGHT + V + +S D +WD DGK LH L
Sbjct: 250 TVRIWNVKLRTLLFTLSGHTAPITCVRWGGQNWIYSSS-YDKTIRIWDAKDGKCLHIL 306
Score = 70 (29.7 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 334 DVVSQSTKADPP----MCLSLAWSTDGQTLFAGYSDNTIRVW 371
DV S+ K D P ++ WS DGQ + +G +D +R+W
Sbjct: 459 DVRSKKMKFDLPGHEDQVFAVDWSPDGQRVASGGADKAVRIW 500
Score = 66 (28.3 bits), Expect = 3.3e-17, Sum P(2) = 3.3e-17
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 351 AWSTDGQTLFAGYSDNTIRVWQV 373
AWSTD + L + D T++VW V
Sbjct: 438 AWSTDSRLLVSSSQDTTLKVWDV 460
Score = 41 (19.5 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 6/21 (28%), Positives = 14/21 (66%)
Query: 351 AWSTDGQTLFAGYSDNTIRVW 371
++S DG+ + D+++R+W
Sbjct: 396 SFSPDGRCIATASFDSSVRLW 416
>ZFIN|ZDB-GENE-061110-55 [details] [associations]
symbol:zgc:153492 "zgc:153492" species:7955 "Danio
rerio" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-061110-55 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR021772 Pfam:PF11816
GeneTree:ENSGT00520000055738 EMBL:CABZ01090140 EMBL:CU633479
IPI:IPI00509466 Ensembl:ENSDART00000105610 Bgee:F1R8P7
Uniprot:F1R8P7
Length = 524
Score = 226 (84.6 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 63/245 (25%), Positives = 114/245 (46%)
Query: 16 NGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSD 75
NG V + +P + + + RD+ + IW + + Y + H+ +++DIVL +
Sbjct: 31 NG-VNALQLDPAL-NRLFTAGRDSIIRIWSVNQHKDPYIASMEH---HTDWVNDIVLCCN 85
Query: 76 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLW-- 133
G +S S D T+++W+ G H V ++A++ D + S+ D+ I LW
Sbjct: 86 GKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDV 145
Query: 134 NTLAHCKF---TIVED---GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKI 187
NTL T+ G+ D S + N +IVS +++++VW+ C +
Sbjct: 146 NTLTALTASNNTVTTSSLSGNKD--SIYSLAMNQMGTVIVSGSTEKVLRVWDPRTCAKLM 203
Query: 188 NHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTL-VHNDIITALCFSPNR 246
GHT + ++ ++ DG+ C SG D LW L + + T VH++ + AL N
Sbjct: 204 KLKGHTDNVKSLLLNRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWAL--QVNE 261
Query: 247 SFQKI 251
+F +
Sbjct: 262 AFTHV 266
Score = 155 (59.6 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 49/182 (26%), Positives = 78/182 (42%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWK---LTR-DDTNYGVPQKRLKGHSHF 66
TL H +V +A K + + S D + +W LT +N V L G+
Sbjct: 111 TLRTHKDYVKALAY-AKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDS 169
Query: 67 ISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSR 126
I + ++ G +SGS +K LR+WD + + HT +V S+ + D Q +S S
Sbjct: 170 IYSLAMNQMGTVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKSLLLNRDGTQCLSGSS 229
Query: 127 DKTIKLWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKL 185
D TI+LW+ C T W V + H + S G DR + +L N +
Sbjct: 230 DGTIRLWSLGQQRCIATYRVHDEGVWALQVNEAFTH----VYSGGRDRKIYCTDLRNPDI 285
Query: 186 KI 187
++
Sbjct: 286 RV 287
Score = 143 (55.4 bits), Expect = 7.1e-08, Sum P(2) = 7.1e-08
Identities = 51/225 (22%), Positives = 92/225 (40%)
Query: 11 TLNGHNGWVTQIAT--NPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFIS 68
++ H WV I N K T++S S D T+ +W + + G L+ H ++
Sbjct: 69 SMEHHTDWVNDIVLCCNGK---TLISASSDTTVKVW-----NAHKGFCMSTLRTHKDYVK 120
Query: 69 DIVLSSDGNYALSGSWDKTLRLWD------LAAGK---TTRRFEDHTKDVLSVAFSVDNR 119
+ + D S D+ + LWD L A TT + + S+A +
Sbjct: 121 ALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMGT 180
Query: 120 QIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
IVS S +K +++W+ K ++ GH+D V + N +S D +++W+
Sbjct: 181 VIVSGSTEKVLRVWDPRTCAKLMKLK-GHTDNVKSLLL--NRDGTQCLSGSSDGTIRLWS 237
Query: 180 LTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLND 224
L + + H + + V+ + SGG+D DL +
Sbjct: 238 LGQQRCIATYRVHDEGVWALQVNEAFTHVYSGGRDRKIYCTDLRN 282
Score = 53 (23.7 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 11/40 (27%), Positives = 20/40 (50%)
Query: 293 DNRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELR 332
D R I++ + + W+ L CK + DL + EE++
Sbjct: 370 DKRHILTKDTNNNVAYWDVLKACK--VEDLGKMEFDEEIK 407
>UNIPROTKB|F1S8U2 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:CU469143 EMBL:CT737224
EMBL:CT737143 Ensembl:ENSSSCT00000011555 Uniprot:F1S8U2
Length = 506
Score = 238 (88.8 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 87/290 (30%), Positives = 132/290 (45%)
Query: 32 ILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLW 91
I+S RDNT+ IW D + ++ L GH+ + + L D ++GS D T+R+W
Sbjct: 217 IVSGLRDNTIKIW----DKSTLEC-KRILTGHTGSV--LCLQYDERVIITGSSDSTVRVW 269
Query: 92 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTI--VEDGHS 149
D+ G+ H + VL + F+ N +V+ S+D++I +W+ + T+ V GH
Sbjct: 270 DVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHR 327
Query: 150 DWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCA 209
V+ V F + IVSA DR +KVWN + C+ +GH + + L
Sbjct: 328 AAVNVVDFDDKY----IVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD--RLVV 381
Query: 210 SGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQ-----KIKL-DISRTLQKS 262
SG D LWD+ G L L H +++ + F R KIK+ D+ L
Sbjct: 382 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLIAALDPR 441
Query: 263 NLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTL 312
P + T R V + F D QIVSSS D TI +W+ L
Sbjct: 442 A----PAGTLCLRTLVEHSGR-VFRLQF--DEFQIVSSSHDDTILIWDFL 484
Score = 194 (73.4 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 61/222 (27%), Positives = 109/222 (49%)
Query: 5 TLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHS 64
TL+ + L GH G V + + + I++ S D+T+ +W D N G L H
Sbjct: 233 TLECKRILTGHTGSVLCLQYDER---VIITGSSDSTVRVW-----DVNTGEMLNTLIHHC 284
Query: 65 HFISDIVLSSDGNYALSGSWDKTLRLWDLAAGK--TTRR-FEDHTKDVLSVAFSVDNRQI 121
+ + L + ++ S D+++ +WD+A+ T RR H V V F D++ I
Sbjct: 285 EAV--LHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYI 340
Query: 122 VSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT 181
VS+S D+TIK+WNT + C+F +GH ++C+++ ++ ++VS D +++W++
Sbjct: 341 VSASGDRTIKVWNT-STCEFVRTLNGHKRGIACLQY----RDRLVVSGSSDNTIRLWDIE 395
Query: 182 -NCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
L++ GH + + D SG D +WDL
Sbjct: 396 CGACLRVLE-GHEELVRCIRF--DNKRIVSGAYDGKIKVWDL 434
Score = 168 (64.2 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 60/193 (31%), Positives = 91/193 (47%)
Query: 1 MSTET-LQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKR 59
M++ T + LR L GH V + + K+ I+S S D T+ +W + + +
Sbjct: 311 MASPTDITLRRVLVGHRAAVNVVDFDDKY---IVSASGDRTIKVWNTSTCEF-----VRT 362
Query: 60 LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 119
L GH I+ L +SGS D T+RLWD+ G R E H + V + F DN+
Sbjct: 363 LNGHKRGIA--CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNK 418
Query: 120 QIVSSSRDKTIKLWNTLAH----------CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSA 169
+IVS + D IK+W+ +A C T+VE HS V ++F Q IVS+
Sbjct: 419 RIVSGAYDGKIKVWDLIAALDPRAPAGTLCLRTLVE--HSGRVFRLQFD-EFQ---IVSS 472
Query: 170 GWDRMVKVWNLTN 182
D + +W+ N
Sbjct: 473 SHDDTILIWDFLN 485
Score = 165 (63.1 bits), Expect = 9.0e-09, Sum P(2) = 9.0e-09
Identities = 64/247 (25%), Positives = 113/247 (45%)
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
L D +SG D T+++WD + + R HT VL + + D R I++ S D T++
Sbjct: 210 LQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVR 267
Query: 132 LWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL---TNCKLKI 187
+W+ T++ H + V +RF+ N ++V+ DR + VW++ T+ L+
Sbjct: 268 VWDVNTGEMLNTLIH--HCEAVLHLRFN----NGMMVTCSKDRSIAVWDMASPTDITLRR 321
Query: 188 NHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNR 246
GH +N V + ASG D +W+ + + + TL H I L +
Sbjct: 322 VLVGHRAAVNVVDFDDKYIVSASG--DRTIKVWNTSTCEFVRTLNGHKRGIACLQY---- 375
Query: 247 SFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTI 306
+ +L +S + + + L+ I G V + F DN++IVS + D I
Sbjct: 376 ---RDRLVVSGS-SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKI 429
Query: 307 KLWNTLA 313
K+W+ +A
Sbjct: 430 KVWDLIA 436
Score = 37 (18.1 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 355 DGQTLFAGYSDNTIRVWQV 373
D + + +G D I+VW +
Sbjct: 416 DNKRIVSGAYDGKIKVWDL 434
>UNIPROTKB|Q2KID6 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9913 "Bos
taurus" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013 EMBL:BC112677
IPI:IPI00704198 RefSeq:NP_001039827.1 UniGene:Bt.74313
ProteinModelPortal:Q2KID6 STRING:Q2KID6 PRIDE:Q2KID6
Ensembl:ENSBTAT00000029844 GeneID:533951 KEGG:bta:533951 CTD:5356
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595
HOVERGEN:HBG053621 InParanoid:Q2KID6 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB NextBio:20876207 Uniprot:Q2KID6
Length = 513
Score = 238 (88.8 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 76/307 (24%), Positives = 129/307 (42%)
Query: 7 QLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHF 66
+L ++GH GWV IA P ++ S D T+ IW L G + L GH
Sbjct: 194 KLYRVISGHLGWVRCIAVEPG-NQWFVTGSADRTIKIWDLAS-----GKLKLSLTGHIST 247
Query: 67 ISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSR 126
+ +++S+ Y S DK ++ WDL K R + H V + +V+ SR
Sbjct: 248 VRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSR 307
Query: 127 DKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLK 186
D T ++W+ + GH++ V+ VR P I++ D +++W+L K +
Sbjct: 308 DSTARIWDVRTKASVHTLS-GHTNAVATVRCQA--AEPQIITGSHDTTIRLWDLVAGKTR 364
Query: 187 INHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPN 245
+ + H + V + P ASG D N W DG + L HN II L + N
Sbjct: 365 VTLTNHKKSVRAVVLHPRHYTFASGSPD-NIKQWKFPDGSFIQNLSGHNAIINTL--TVN 421
Query: 246 RSFQKIKLDISRTLQKSNLIL-YPIN--HGKMETPFFSLFRDVLSVAFSVDNRQIVSSSR 302
+ + T+ + Y H ++ + + AF +++++
Sbjct: 422 SDGVLVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACAFDQSESRLLTAEA 481
Query: 303 DKTIKLW 309
DKTIK++
Sbjct: 482 DKTIKVY 488
Score = 158 (60.7 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 48/172 (27%), Positives = 74/172 (43%)
Query: 144 VEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSP 203
V GH WV C+ P +Q + SA DR +K+W+L + KLK++ +GH + V VS
Sbjct: 198 VISGHLGWVRCIAVEPGNQWFVTGSA--DRTIKIWDLASGKLKLSLTGHISTVRGVIVST 255
Query: 204 DGSLCASGGKDMNAMLWDLNDGKHL-HTLVHNDIITALCFSPNRSFQKIKLDISRTLQK- 261
S G+D WDL K + H H + L P +D+ T +
Sbjct: 256 RSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPT-------IDVLVTCSRD 308
Query: 262 SNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA 313
S ++ + V +V QI++ S D TI+LW+ +A
Sbjct: 309 STARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVA 360
>UNIPROTKB|O43660 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9606 "Homo
sapiens" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0003714 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871
EMBL:CH471056 GO:GO:0000398 GO:GO:0071013 CTD:5356
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF044333 EMBL:AK002108 EMBL:BC020786 EMBL:BC106004
IPI:IPI00002624 IPI:IPI00382756 RefSeq:NP_001188493.1
RefSeq:NP_002660.1 UniGene:Hs.249996 ProteinModelPortal:O43660
SMR:O43660 IntAct:O43660 MINT:MINT-2999551 STRING:O43660
PhosphoSite:O43660 PaxDb:O43660 PRIDE:O43660
Ensembl:ENST00000302078 Ensembl:ENST00000499023 GeneID:5356
KEGG:hsa:5356 UCSC:uc003iny.3 UCSC:uc003inz.3 GeneCards:GC04M155457
HGNC:HGNC:9089 HPA:HPA035932 MIM:605961 neXtProt:NX_O43660
PharmGKB:PA33416 PhylomeDB:O43660 GenomeRNAi:5356 NextBio:20762
ArrayExpress:O43660 Bgee:O43660 CleanEx:HS_PLRG1
Genevestigator:O43660 GermOnline:ENSG00000171566 Uniprot:O43660
Length = 514
Score = 238 (88.8 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 76/307 (24%), Positives = 129/307 (42%)
Query: 7 QLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHF 66
+L ++GH GWV IA P ++ S D T+ IW L G + L GH
Sbjct: 195 KLYRVISGHLGWVRCIAVEPG-NQWFVTGSADRTIKIWDLAS-----GKLKLSLTGHIST 248
Query: 67 ISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSR 126
+ +++S+ Y S DK ++ WDL K R + H V + +V+ SR
Sbjct: 249 VRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSR 308
Query: 127 DKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLK 186
D T ++W+ + GH++ V+ VR P I++ D +++W+L K +
Sbjct: 309 DSTARIWDVRTKASVHTLS-GHTNAVATVRCQA--AEPQIITGSHDTTIRLWDLVAGKTR 365
Query: 187 INHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPN 245
+ + H + V + P ASG D N W DG + L HN II L + N
Sbjct: 366 VTLTNHKKSVRAVVLHPRHYTFASGSPD-NIKQWKFPDGSFIQNLSGHNAIINTL--TVN 422
Query: 246 RSFQKIKLDISRTLQKSNLIL-YPIN--HGKMETPFFSLFRDVLSVAFSVDNRQIVSSSR 302
+ + T+ + Y H ++ + + AF +++++
Sbjct: 423 SDGVLVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACAFDQSESRLLTAEA 482
Query: 303 DKTIKLW 309
DKTIK++
Sbjct: 483 DKTIKVY 489
Score = 158 (60.7 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 48/172 (27%), Positives = 74/172 (43%)
Query: 144 VEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSP 203
V GH WV C+ P +Q + SA DR +K+W+L + KLK++ +GH + V VS
Sbjct: 199 VISGHLGWVRCIAVEPGNQWFVTGSA--DRTIKIWDLASGKLKLSLTGHISTVRGVIVST 256
Query: 204 DGSLCASGGKDMNAMLWDLNDGKHL-HTLVHNDIITALCFSPNRSFQKIKLDISRTLQK- 261
S G+D WDL K + H H + L P +D+ T +
Sbjct: 257 RSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPT-------IDVLVTCSRD 309
Query: 262 SNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA 313
S ++ + V +V QI++ S D TI+LW+ +A
Sbjct: 310 STARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVA 361
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 229 (85.7 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 82/311 (26%), Positives = 145/311 (46%)
Query: 8 LRGTLNGHNGWVTQIATNPKF---PDT---ILSCSRDNTLIIWKLTRDDTNYGVPQKRLK 61
L L GH+ W+T ++ P P + + S S+D T+ IW DT V Q +
Sbjct: 221 LGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIW-----DTVSRVCQYTMS 275
Query: 62 GHSHFISDIVLSSDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAFSVDNRQ 120
GH++ +S + G SGS D+T+R+WD+ + G+ + H V ++ S D
Sbjct: 276 GHTNSVSCVKWGGQG-LLYSGSHDRTVRVWDINSQGRCINILKSHAHWVNHLSLSTDYAL 334
Query: 121 IVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN- 179
+ + D T K +T + +E+ C + + N + ++V+A D + +WN
Sbjct: 335 RIGAF-DHTGKKPSTPEEAQKKALENYEK---ICKK-NGNSEE-MMVTASDDYTMFLWNP 388
Query: 180 LTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIIT 238
L + K +GH +N V SPDG S D + LWD DGK + T H +
Sbjct: 389 LKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVY 448
Query: 239 ALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIV 298
+ +S + +L +S + + + L ++ + K+ +V +V +SVD +++
Sbjct: 449 QVAWSSD-----CRLLVSCS-KDTTLKVWDVRTRKLSVDLPGHKDEVYTVDWSVDGKRVC 502
Query: 299 SSSRDKTIKLW 309
S +DK ++LW
Sbjct: 503 SGGKDKMVRLW 513
Score = 222 (83.2 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 61/204 (29%), Positives = 105/204 (51%)
Query: 14 GHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLS 73
GH + A P +++ + DNT IW DT P LKGH +++ + S
Sbjct: 141 GHGSTILCSAFAPHTSSRMVTGAGDNTARIWDC---DTQ--TPMHTLKGHYNWVLCVSWS 195
Query: 74 SDGNYALSGSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSV-------DNRQIVSSS 125
DG +GS D T+RLWD +G+ H+K + S+++ ++ SSS
Sbjct: 196 PDGEVIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSS 255
Query: 126 RDKTIKLWNTLAH-CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCK 184
+D TIK+W+T++ C++T+ GH++ VSCV++ ++ S DR V+VW++ +
Sbjct: 256 KDGTIKIWDTVSRVCQYTM--SGHTNSVSCVKWGGQG---LLYSGSHDRTVRVWDINSQG 310
Query: 185 LKINH-SGHTGYLNTVTVSPDGSL 207
IN H ++N +++S D +L
Sbjct: 311 RCINILKSHAHWVNHLSLSTDYAL 334
Score = 191 (72.3 bits), Expect = 7.9e-14, Sum P(2) = 7.9e-14
Identities = 65/266 (24%), Positives = 113/266 (42%)
Query: 60 LKGH-SHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN 118
+ GH S + + ++G+ D T R+WD + H VL V++S D
Sbjct: 139 IAGHGSTILCSAFAPHTSSRMVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDG 198
Query: 119 RQIVSSSRDKTIKLWNTLA-HCKFTIVEDGHSDWVSCVRFSPNH-----QNPIIVSAGWD 172
I + S D TI+LW+ + C + GHS W++ + + P H P + S+ D
Sbjct: 199 EVIATGSMDNTIRLWDPKSGQCLGDALR-GHSKWITSLSWEPIHLVKPGSKPRLASSSKD 257
Query: 173 RMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLND-GKHLHTL 231
+K+W+ + + SGHT ++ V G L SG D +WD+N G+ ++ L
Sbjct: 258 GTIKIWDTVSRVCQYTMSGHTNSVSCVKWGGQG-LLYSGSHDRTVRVWDINSQGRCINIL 316
Query: 232 V-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAF 290
H + L S + + + D T +K P + + + +
Sbjct: 317 KSHAHWVNHLSLSTDYALRIGAFD--HTGKK------PSTPEEAQKKALENYEKICKKNG 368
Query: 291 SVDNRQIVSSSRDKTIKLWNTLAHCK 316
+ + +V++S D T+ LWN L K
Sbjct: 369 NSEE-MMVTASDDYTMFLWNPLKSTK 393
Score = 187 (70.9 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 84/327 (25%), Positives = 139/327 (42%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISD- 69
TL GH WV ++ +P + I + S DNT+ +W D + L+GHS +I+
Sbjct: 181 TLKGHYNWVLCVSWSPD-GEVIATGSMDNTIRLW----DPKSGQCLGDALRGHSKWITSL 235
Query: 70 ----IVLSSDGNYA--LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 123
I L G+ S S D T+++WD + HT V V + + S
Sbjct: 236 SWEPIHLVKPGSKPRLASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWGGQGL-LYS 294
Query: 124 SSRDKTIKLW--NTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT 181
S D+T+++W N+ C I++ H+ WV+ + S ++ I +D K +
Sbjct: 295 GSHDRTVRVWDINSQGRC-INILKS-HAHWVNHLSLSTDYALRI---GAFDHTGKKPSTP 349
Query: 182 NCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWD-LNDGKHLHTLV-HNDIITA 239
K + S + + AS D LW+ L K + + H ++
Sbjct: 350 EEAQKKALENYEKICKKNGNSEEMMVTASD--DYTMFLWNPLKSTKPIARMTGHQKLVNH 407
Query: 240 LCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVS 299
+ FSP+ + +S + S + L+ GK + F V VA+S D R +VS
Sbjct: 408 VAFSPDGRYI-----VSASFDNS-IKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVS 461
Query: 300 SSRDKTIKLWNTLAHCKFTIVDLETKK 326
S+D T+K+W+ K + VDL K
Sbjct: 462 CSKDTTLKVWDVRTR-KLS-VDLPGHK 486
Score = 141 (54.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 61/270 (22%), Positives = 118/270 (43%)
Query: 120 QIVSSSRDKTIKLWNTLAH-CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVW 178
++ SSS+D TIK+W+T++ C++T+ GH++ VSCV++ ++ S DR V+VW
Sbjct: 250 RLASSSKDGTIKIWDTVSRVCQYTM--SGHTNSVSCVKWGGQG---LLYSGSHDRTVRVW 304
Query: 179 NLTNCKLKINH-SGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDII 237
++ + IN H ++N +++S D +L G D + L + + I
Sbjct: 305 DINSQGRCINILKSHAHWVNHLSLSTDYAL-RIGAFDHTGKKPSTPEEAQKKALENYEKI 363
Query: 238 TALCFSPNRSFQKIKLDIS----RTLQKSNLILYPINHGKM--ETPFFSLFRDVLSVAF- 290
+ D + L+ + I H K+ F R ++S +F
Sbjct: 364 CKKNGNSEEMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFD 423
Query: 291 -SV---DNR--QIVSSSRDKTIKLWNTL--AHCKFTI-VDLETKKMVEELRPDVVSQSTK 341
S+ D R + +S+ R ++ + C+ + +T V ++R +S
Sbjct: 424 NSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVRTRKLSVDLP 483
Query: 342 ADPPMCLSLAWSTDGQTLFAGYSDNTIRVW 371
++ WS DG+ + +G D +R+W
Sbjct: 484 GHKDEVYTVDWSVDGKRVCSGGKDKMVRLW 513
Score = 57 (25.1 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 350 LAWSTDGQTLFAGYSDNTIRVWQV 373
+AWS+D + L + D T++VW V
Sbjct: 450 VAWSSDCRLLVSCSKDTTLKVWDV 473
>UNIPROTKB|E2QYT6 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GeneTree:ENSGT00700000104496 OMA:ITAEADK EMBL:AAEX03010065
Ensembl:ENSCAFT00000013353 Uniprot:E2QYT6
Length = 515
Score = 238 (88.8 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 76/307 (24%), Positives = 129/307 (42%)
Query: 7 QLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHF 66
+L ++GH GWV IA P ++ S D T+ IW L G + L GH
Sbjct: 196 KLYRVISGHLGWVRCIAVEPG-NQWFVTGSADRTIKIWDLAS-----GKLKLSLTGHIST 249
Query: 67 ISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSR 126
+ +++S+ Y S DK ++ WDL K R + H V + +V+ SR
Sbjct: 250 VRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSR 309
Query: 127 DKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLK 186
D T ++W+ + GH++ V+ VR P I++ D +++W+L K +
Sbjct: 310 DSTARIWDVRTKASVHTLS-GHTNAVATVRCQA--AEPQIITGSHDTTIRLWDLVAGKTR 366
Query: 187 INHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPN 245
+ + H + V + P ASG D N W DG + L HN II L + N
Sbjct: 367 VTLTNHKKSVRAVVLHPRHYTFASGSPD-NIKQWKFPDGSFIQNLSGHNAIINTL--TVN 423
Query: 246 RSFQKIKLDISRTLQKSNLIL-YPIN--HGKMETPFFSLFRDVLSVAFSVDNRQIVSSSR 302
+ + T+ + Y H ++ + + AF +++++
Sbjct: 424 SDGVLVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACAFDQSESRLLTAEA 483
Query: 303 DKTIKLW 309
DKTIK++
Sbjct: 484 DKTIKVY 490
Score = 158 (60.7 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 48/172 (27%), Positives = 74/172 (43%)
Query: 144 VEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSP 203
V GH WV C+ P +Q + SA DR +K+W+L + KLK++ +GH + V VS
Sbjct: 200 VISGHLGWVRCIAVEPGNQWFVTGSA--DRTIKIWDLASGKLKLSLTGHISTVRGVIVST 257
Query: 204 DGSLCASGGKDMNAMLWDLNDGKHL-HTLVHNDIITALCFSPNRSFQKIKLDISRTLQK- 261
S G+D WDL K + H H + L P +D+ T +
Sbjct: 258 RSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPT-------IDVLVTCSRD 310
Query: 262 SNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA 313
S ++ + V +V QI++ S D TI+LW+ +A
Sbjct: 311 STARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVA 362
>UNIPROTKB|D6RF23 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0008200 "ion channel
inhibitor activity" evidence=IEA] [GO:0015935 "small ribosomal
subunit" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0090003
"regulation of establishment of protein localization to plasma
membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 GO:GO:0017148 GO:GO:0043025
GO:GO:0030425 GO:GO:0008200 ChiTaRS:GNB2L1 HGNC:HGNC:4399
GO:GO:0015935 EMBL:AC008443 IPI:IPI00965193
ProteinModelPortal:D6RF23 SMR:D6RF23 PRIDE:D6RF23
Ensembl:ENST00000514455 HOGENOM:HOG000184861 ArrayExpress:D6RF23
Bgee:D6RF23 Uniprot:D6RF23
Length = 101
Score = 218 (81.8 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 48/115 (41%), Positives = 73/115 (63%)
Query: 265 ILYPINHGKMETPFFSLFR-DVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLE 323
+L+ +N GK ++L D+++ NR + ++ +IK+W DLE
Sbjct: 1 MLWDLNEGKH---LYTLDGGDIINALCFSPNRYWLCAATGPSIKIW-----------DLE 46
Query: 324 TKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVSVTSR 378
K +V+EL+ +V+S S+KA+PP C SLAWS DGQTLFAGY+DN +RVWQV++ +R
Sbjct: 47 GKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGTR 101
Score = 135 (52.6 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 32/94 (34%), Positives = 50/94 (53%)
Query: 218 MLWDLNDGKHLHTLVHNDIITALCFSPNRSFQKIKLDISRTLQ--KSNLILYPINHGKME 275
MLWDLN+GKHL+TL DII ALCFSPNR + S + + +I+ + +
Sbjct: 1 MLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVIS 60
Query: 276 TPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLW 309
T + S+A+S D + + + D +++W
Sbjct: 61 TSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVW 94
>UNIPROTKB|F1MVN1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:DAAA02058986 EMBL:DAAA02058987
EMBL:DAAA02058988 EMBL:DAAA02058989 EMBL:DAAA02058990
EMBL:DAAA02058991 IPI:IPI00717164 UniGene:Bt.25271
Ensembl:ENSBTAT00000009830 Uniprot:F1MVN1
Length = 569
Score = 238 (88.8 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 87/290 (30%), Positives = 132/290 (45%)
Query: 32 ILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLW 91
I+S RDNT+ IW D + ++ L GH+ + + L D ++GS D T+R+W
Sbjct: 280 IVSGLRDNTIKIW----DKSTLEC-KRILTGHTGSV--LCLQYDERVIITGSSDSTVRVW 332
Query: 92 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTI--VEDGHS 149
D+ G+ H + VL + F+ N +V+ S+D++I +W+ + T+ V GH
Sbjct: 333 DVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHR 390
Query: 150 DWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCA 209
V+ V F + IVSA DR +KVWN + C+ +GH + + L
Sbjct: 391 AAVNVVDFDDKY----IVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD--RLVV 444
Query: 210 SGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQ-----KIKL-DISRTLQKS 262
SG D LWD+ G L L H +++ + F R KIK+ D+ L
Sbjct: 445 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPR 504
Query: 263 NLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTL 312
P + T R V + F D QIVSSS D TI +W+ L
Sbjct: 505 A----PAGTLCLRTLVEHSGR-VFRLQF--DEFQIVSSSHDDTILIWDFL 547
Score = 194 (73.4 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 61/222 (27%), Positives = 109/222 (49%)
Query: 5 TLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHS 64
TL+ + L GH G V + + + I++ S D+T+ +W D N G L H
Sbjct: 296 TLECKRILTGHTGSVLCLQYDER---VIITGSSDSTVRVW-----DVNTGEMLNTLIHHC 347
Query: 65 HFISDIVLSSDGNYALSGSWDKTLRLWDLAAGK--TTRR-FEDHTKDVLSVAFSVDNRQI 121
+ + L + ++ S D+++ +WD+A+ T RR H V V F D++ I
Sbjct: 348 EAV--LHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYI 403
Query: 122 VSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT 181
VS+S D+TIK+WNT + C+F +GH ++C+++ ++ ++VS D +++W++
Sbjct: 404 VSASGDRTIKVWNT-STCEFVRTLNGHKRGIACLQY----RDRLVVSGSSDNTIRLWDIE 458
Query: 182 -NCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
L++ GH + + D SG D +WDL
Sbjct: 459 CGACLRVLE-GHEELVRCIRF--DNKRIVSGAYDGKIKVWDL 497
Score = 167 (63.8 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 60/193 (31%), Positives = 91/193 (47%)
Query: 1 MSTET-LQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKR 59
M++ T + LR L GH V + + K+ I+S S D T+ +W + + +
Sbjct: 374 MASPTDITLRRVLVGHRAAVNVVDFDDKY---IVSASGDRTIKVWNTSTCEF-----VRT 425
Query: 60 LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 119
L GH I+ L +SGS D T+RLWD+ G R E H + V + F DN+
Sbjct: 426 LNGHKRGIA--CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNK 481
Query: 120 QIVSSSRDKTIKLWNTLAH----------CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSA 169
+IVS + D IK+W+ +A C T+VE HS V ++F Q IVS+
Sbjct: 482 RIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVE--HSGRVFRLQFD-EFQ---IVSS 535
Query: 170 GWDRMVKVWNLTN 182
D + +W+ N
Sbjct: 536 SHDDTILIWDFLN 548
Score = 164 (62.8 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 64/247 (25%), Positives = 113/247 (45%)
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
L D +SG D T+++WD + + R HT VL + + D R I++ S D T++
Sbjct: 273 LQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVR 330
Query: 132 LWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL---TNCKLKI 187
+W+ T++ H + V +RF+ N ++V+ DR + VW++ T+ L+
Sbjct: 331 VWDVNTGEMLNTLIH--HCEAVLHLRFN----NGMMVTCSKDRSIAVWDMASPTDITLRR 384
Query: 188 NHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNR 246
GH +N V + ASG D +W+ + + + TL H I L +
Sbjct: 385 VLVGHRAAVNVVDFDDKYIVSASG--DRTIKVWNTSTCEFVRTLNGHKRGIACLQY---- 438
Query: 247 SFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTI 306
+ +L +S + + + L+ I G V + F DN++IVS + D I
Sbjct: 439 ---RDRLVVSGS-SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKI 492
Query: 307 KLWNTLA 313
K+W+ +A
Sbjct: 493 KVWDLVA 499
Score = 37 (18.1 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 355 DGQTLFAGYSDNTIRVWQV 373
D + + +G D I+VW +
Sbjct: 479 DNKRIVSGAYDGKIKVWDL 497
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 239 (89.2 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 60/189 (31%), Positives = 92/189 (48%)
Query: 60 LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 119
L GH+ I + +S+ ++GS ++R+WDL A K R H ++ S+ F
Sbjct: 59 LTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGS 118
Query: 120 QIVSSSRDKTIKLWNTLAH-CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVW 178
+ S S D IKLW+ C F H+ V C+RFSP+ + + SA D VK+W
Sbjct: 119 FVASGSLDTDIKLWDVRRKGCIFKY--KSHTQAVRCLRFSPDGK--WLASAADDHTVKLW 174
Query: 179 NLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIIT 238
+LT K+ +GH+G +N V P L ASG D WDL + H+ + + +
Sbjct: 175 DLTAGKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDRTIRFWDL-EKFHVVSCIEEEATP 233
Query: 239 ALC--FSPN 245
C F+P+
Sbjct: 234 VRCILFNPD 242
Score = 172 (65.6 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 47/190 (24%), Positives = 78/190 (41%)
Query: 58 KRLKGHSHFISDIVLS-SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 116
+ + HS +S +VL S G +G D + +W + HT + S+ S
Sbjct: 14 QEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISA 73
Query: 117 DNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVK 176
IV+ S+ +I++W+ L K GH + + F P + S D +K
Sbjct: 74 KEELIVAGSQSGSIRVWD-LEAAKILRTLLGHKANICSLDFHP--YGSFVASGSLDTDIK 130
Query: 177 VWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HND 235
+W++ + HT + + SPDG AS D LWDL GK + H+
Sbjct: 131 LWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSG 190
Query: 236 IITALCFSPN 245
+ + F P+
Sbjct: 191 PVNVVEFHPS 200
Score = 163 (62.4 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 42/157 (26%), Positives = 73/157 (46%)
Query: 4 ETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGH 63
E ++ TL GH + + +P + + S S D + +W + R + + K H
Sbjct: 93 EAAKILRTLLGHKANICSLDFHP-YGSFVASGSLDTDIKLWDVRRKGCIF-----KYKSH 146
Query: 64 SHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 123
+ + + S DG + S + D T++LWDL AGK F H+ V V F + S
Sbjct: 147 TQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYLLAS 206
Query: 124 SSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPN 160
S D+TI+ W+ + +E+ + V C+ F+P+
Sbjct: 207 GSSDRTIRFWDLEKFHVVSCIEEEATP-VRCILFNPD 242
Score = 148 (57.2 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 48/209 (22%), Positives = 90/209 (43%)
Query: 105 HTKDVLSVAFSVDNRQIVSSSRDKT-IKLWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQ 162
H+ +V S+ +++++ D + +W+ +C ++ GH+ + ++ S +
Sbjct: 19 HSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLT--GHTTPIESLQISAKEE 76
Query: 163 NPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
+IV+ ++VW+L K+ GH + ++ P GS ASG D + LWD+
Sbjct: 77 --LIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDV 134
Query: 223 N-DGKHLHTLVHNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSL 281
G H + L FSP+ + D T++ L+ + GK+ F
Sbjct: 135 RRKGCIFKYKSHTQAVRCLRFSPDGKWLASAAD-DHTVK-----LWDLTAGKVMFEFTGH 188
Query: 282 FRDVLSVAFSVDNRQIVSSSRDKTIKLWN 310
V V F + S S D+TI+ W+
Sbjct: 189 SGPVNVVEFHPSEYLLASGSSDRTIRFWD 217
Score = 139 (54.0 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 47/169 (27%), Positives = 80/169 (47%)
Query: 148 HSDWVSCVRFSPNHQNPIIVSAGWDRMVKVW--NLTNCKLKINHSGHTGYLNTVTVSPDG 205
HS VS + + ++ + G D V VW N NC + + +GHT + ++ +S
Sbjct: 19 HSSNVSSLVLGKS-TGRLLATGGDDCRVNVWSVNKPNCVMSL--TGHTTPIESLQISAKE 75
Query: 206 SLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNL 264
L +G + + +WDL K L TL+ H I +L F P SF S +L +++
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVA-----SGSLD-TDI 129
Query: 265 ILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA 313
L+ + + S + V + FS D + + S++ D T+KLW+ A
Sbjct: 130 KLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 178
Score = 42 (19.8 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 359 LFAGYSDNTIRVWQV 373
L +G SD TIR W +
Sbjct: 204 LASGSSDRTIRFWDL 218
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 236 (88.1 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 51/150 (34%), Positives = 84/150 (56%)
Query: 29 PDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTL 88
P+ ++S S D T+ +W+ + P+KRL GH ++ + S DG + S S+DK++
Sbjct: 329 PERLVSGSDDFTMFLWEPSVSKQ----PKKRLTGHQQLVNHVYFSPDGKWIASASFDKSV 384
Query: 89 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGH 148
RLW+ G+ F H V V++S D+R ++S S+D T+K+W K GH
Sbjct: 385 RLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTK-KLKQDLPGH 443
Query: 149 SDWVSCVRFSPNHQNPIIVSAGWDRMVKVW 178
+D V V +SP+ + +VS G DR++K+W
Sbjct: 444 ADEVFAVDWSPDGEK--VVSGGKDRVLKLW 471
Score = 212 (79.7 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 88/342 (25%), Positives = 142/342 (41%)
Query: 60 LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 119
+ GH+ + + S DG SGS D T+RLWDL + H VL+VA+S D +
Sbjct: 105 IAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGK 164
Query: 120 QIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNH-QNPI--IVSAGWDRMVK 176
+VS S+ I WN GH W++ + + P H +P V++ D +
Sbjct: 165 HLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDAR 224
Query: 177 VWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HND 235
+W++T K I SGHT + V DG + +G +D +W+ GK + L H
Sbjct: 225 IWDITLKKSIICLSGHTLAVTCVKWGGDG-IIYTGSQDCTIKMWETTQGKLIRELKGHGH 283
Query: 236 IITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNR 295
I +L S + D T ++ YP N K + +L R + S +
Sbjct: 284 WINSLALSTEYVLRTGAFD--HTGRQ-----YPPNEEKQK----ALERYNKTKGDSPE-- 330
Query: 296 QIVSSSRDKTIKLWNT----------------LAHCKFT-----IVDLETKKMVEELRPD 334
++VS S D T+ LW + H F+ I K V L
Sbjct: 331 RLVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVR-LWNG 389
Query: 335 VVSQST---KADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQV 373
+ Q + ++WS D + L +G D+T+++W++
Sbjct: 390 ITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEI 431
Score = 204 (76.9 bits), Expect = 7.5e-16, Sum P(2) = 7.5e-16
Identities = 80/306 (26%), Positives = 129/306 (42%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
T GH WV +A +P ++S S+ + W + + G P L GH +I+ I
Sbjct: 146 TCKGHKNWVLTVAWSPDGKH-LVSGSKSGEICCWNPKKGELE-GSP---LTGHKKWITGI 200
Query: 71 V-----LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSS 125
LSS ++ S D R+WD+ K+ HT V V + D I + S
Sbjct: 201 SWEPVHLSSPCRRFVTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKWGGDGI-IYTGS 259
Query: 126 RDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKL 185
+D TIK+W T K GH W++ + S + ++ + +D + + K
Sbjct: 260 QDCTIKMWET-TQGKLIRELKGHGHWINSLALSTEY---VLRTGAFDHTGRQYPPNEEKQ 315
Query: 186 KINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV--HNDIITALCFS 243
K Y T SP+ + SG D LW+ + K + H ++ + FS
Sbjct: 316 KALER----YNKTKGDSPERLV--SGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFS 369
Query: 244 PNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRD 303
P+ K S + KS + I G+ T F V V++S D+R ++S S+D
Sbjct: 370 PDG-----KWIASASFDKSVRLWNGIT-GQFVTVFRGHVGPVYQVSWSADSRLLLSGSKD 423
Query: 304 KTIKLW 309
T+K+W
Sbjct: 424 STLKIW 429
Score = 187 (70.9 bits), Expect = 9.3e-12, P = 9.3e-12
Identities = 70/236 (29%), Positives = 113/236 (47%)
Query: 12 LNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV 71
L+GH VT + I + S+D T+ +W+ T+ G + LKGH H+I+ +
Sbjct: 237 LSGHTLAVTCVKWGGD--GIIYTGSQDCTIKMWETTQ-----GKLIRELKGHGHWINSLA 289
Query: 72 LSSDGNYAL-SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 130
LS++ Y L +G++D T R + K + E + K + S + ++VS S D T+
Sbjct: 290 LSTE--YVLRTGAFDHTGRQYPPNEEKQ-KALERYNK---TKGDSPE--RLVSGSDDFTM 341
Query: 131 KLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS 190
LW + GH V+ V FSP+ + I SA +D+ V++WN +
Sbjct: 342 FLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGK--WIASASFDKSVRLWNGITGQFVTVFR 399
Query: 191 GHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPN 245
GH G + V+ S D L SG KD +W++ K L H D + A+ +SP+
Sbjct: 400 GHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPD 455
Score = 122 (48.0 bits), Expect = 0.00017, P = 0.00017
Identities = 64/258 (24%), Positives = 105/258 (40%)
Query: 139 CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL-TNCKLKINHSGHTGYLN 197
C TI GH++ V CV FSP+ + + S D V++W+L T L GH ++
Sbjct: 101 CSQTIA--GHAEAVLCVSFSPDGKQ--LASGSGDTTVRLWDLYTETPL-FTCKGHKNWVL 155
Query: 198 TVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV--HNDIITALCFSPNRSFQKIKLDI 255
TV SPDG SG K W+ G+ + + H IT + + P + +
Sbjct: 156 TVAWSPDGKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFV 215
Query: 256 SRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNT---- 311
+ + + + ++ I K V V + D I + S+D TIK+W T
Sbjct: 216 TSS-KDGDARIWDITLKKSIICLSGHTLAVTCVKWGGDGI-IYTGSQDCTIKMWETTQGK 273
Query: 312 -LAHCKFTIVDLETKKMVEE--LRPDVVSQSTKADPP-----MCLSLAWSTDGQT---LF 360
+ K + + + E LR + + PP L T G + L
Sbjct: 274 LIRELKGHGHWINSLALSTEYVLRTGAFDHTGRQYPPNEEKQKALERYNKTKGDSPERLV 333
Query: 361 AGYSDNTIRVWQVSVTSR 378
+G D T+ +W+ SV+ +
Sbjct: 334 SGSDDFTMFLWEPSVSKQ 351
Score = 60 (26.2 bits), Expect = 7.5e-16, Sum P(2) = 7.5e-16
Identities = 10/43 (23%), Positives = 21/43 (48%)
Query: 330 ELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQ 372
E+R + Q ++ WS DG+ + +G D +++W+
Sbjct: 430 EIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLWK 472
>UNIPROTKB|E2RDC4 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA] [GO:0061136 "regulation of proteasomal
protein catabolic process" evidence=IEA] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945 KO:K03362
OMA:NAYLKPM GeneTree:ENSGT00690000101849 EMBL:AAEX03015480
EMBL:AAEX03015479 RefSeq:XP_543980.3 ProteinModelPortal:E2RDC4
Ensembl:ENSCAFT00000015696 GeneID:486851 KEGG:cfa:486851
NextBio:20860562 Uniprot:E2RDC4
Length = 605
Score = 238 (88.8 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 87/290 (30%), Positives = 132/290 (45%)
Query: 32 ILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLW 91
I+S RDNT+ IW D + ++ L GH+ + + L D ++GS D T+R+W
Sbjct: 316 IVSGLRDNTIKIW----DKSTLEC-KRILTGHTGSV--LCLQYDERVIITGSSDSTVRVW 368
Query: 92 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTI--VEDGHS 149
D+ G+ H + VL + F+ N +V+ S+D++I +W+ + T+ V GH
Sbjct: 369 DVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHR 426
Query: 150 DWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCA 209
V+ V F + IVSA DR +KVWN + C+ +GH + + L
Sbjct: 427 AAVNVVDFDDKY----IVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD--RLVV 480
Query: 210 SGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQ-----KIKL-DISRTLQKS 262
SG D LWD+ G L L H +++ + F R KIK+ D+ L
Sbjct: 481 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPR 540
Query: 263 NLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTL 312
P + T R V + F D QIVSSS D TI +W+ L
Sbjct: 541 A----PAGTLCLRTLVEHSGR-VFRLQF--DEFQIVSSSHDDTILIWDFL 583
Score = 194 (73.4 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
Identities = 61/222 (27%), Positives = 109/222 (49%)
Query: 5 TLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHS 64
TL+ + L GH G V + + + I++ S D+T+ +W D N G L H
Sbjct: 332 TLECKRILTGHTGSVLCLQYDER---VIITGSSDSTVRVW-----DVNTGEMLNTLIHHC 383
Query: 65 HFISDIVLSSDGNYALSGSWDKTLRLWDLAAGK--TTRR-FEDHTKDVLSVAFSVDNRQI 121
+ + L + ++ S D+++ +WD+A+ T RR H V V F D++ I
Sbjct: 384 EAV--LHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYI 439
Query: 122 VSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT 181
VS+S D+TIK+WNT + C+F +GH ++C+++ ++ ++VS D +++W++
Sbjct: 440 VSASGDRTIKVWNT-STCEFVRTLNGHKRGIACLQY----RDRLVVSGSSDNTIRLWDIE 494
Query: 182 -NCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
L++ GH + + D SG D +WDL
Sbjct: 495 CGACLRVLE-GHEELVRCIRF--DNKRIVSGAYDGKIKVWDL 533
Score = 167 (63.8 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 60/193 (31%), Positives = 91/193 (47%)
Query: 1 MSTET-LQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKR 59
M++ T + LR L GH V + + K+ I+S S D T+ +W + + +
Sbjct: 410 MASPTDITLRRVLVGHRAAVNVVDFDDKY---IVSASGDRTIKVWNTSTCEF-----VRT 461
Query: 60 LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 119
L GH I+ L +SGS D T+RLWD+ G R E H + V + F DN+
Sbjct: 462 LNGHKRGIA--CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNK 517
Query: 120 QIVSSSRDKTIKLWNTLAH----------CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSA 169
+IVS + D IK+W+ +A C T+VE HS V ++F Q IVS+
Sbjct: 518 RIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVE--HSGRVFRLQFD-EFQ---IVSS 571
Query: 170 GWDRMVKVWNLTN 182
D + +W+ N
Sbjct: 572 SHDDTILIWDFLN 584
Score = 164 (62.8 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 64/247 (25%), Positives = 113/247 (45%)
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
L D +SG D T+++WD + + R HT VL + + D R I++ S D T++
Sbjct: 309 LQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVR 366
Query: 132 LWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL---TNCKLKI 187
+W+ T++ H + V +RF+ N ++V+ DR + VW++ T+ L+
Sbjct: 367 VWDVNTGEMLNTLIH--HCEAVLHLRFN----NGMMVTCSKDRSIAVWDMASPTDITLRR 420
Query: 188 NHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNR 246
GH +N V + ASG D +W+ + + + TL H I L +
Sbjct: 421 VLVGHRAAVNVVDFDDKYIVSASG--DRTIKVWNTSTCEFVRTLNGHKRGIACLQY---- 474
Query: 247 SFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTI 306
+ +L +S + + + L+ I G V + F DN++IVS + D I
Sbjct: 475 ---RDRLVVSGS-SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKI 528
Query: 307 KLWNTLA 313
K+W+ +A
Sbjct: 529 KVWDLVA 535
Score = 37 (18.1 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 355 DGQTLFAGYSDNTIRVWQV 373
D + + +G D I+VW +
Sbjct: 515 DNKRIVSGAYDGKIKVWDL 533
>UNIPROTKB|B4MY77 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7260 "Drosophila willistoni"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 OMA:SWKCVCT OrthoDB:EOG45DV4X EMBL:CH963894
RefSeq:XP_002066080.1 ProteinModelPortal:B4MY77 STRING:B4MY77
EnsemblMetazoa:FBtr0252775 GeneID:6643305 KEGG:dwi:Dwil_GK22124
FlyBase:FBgn0224109 InParanoid:B4MY77 Uniprot:B4MY77
Length = 335
Score = 206 (77.6 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
Identities = 61/225 (27%), Positives = 101/225 (44%)
Query: 6 LQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSH 65
L L TL GH G + +A +PK +T SC D + IW L+ + ++ GH
Sbjct: 4 LILEHTLQGHKGRIWGVAWHPK-GNTFASCGEDKAIRIWSLSGN--SWSTKTILSDGHKR 60
Query: 66 FISDIVLSSDGNYALSGSWDKTLRLWDLAAGK--TTRRFEDHTKDVLSVAFSVDNRQIVS 123
I +I S G Y S S+D T +W ++G+ E H +V SV++S + +
Sbjct: 61 TIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSKSGGLLAT 120
Query: 124 SSRDKTIKLWNTLAHCKF--TIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT 181
SRDK++ +W +F V + H+ V V + P + I+ SA +D +K++ +
Sbjct: 121 CSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKE--ILASASYDNTIKMFAES 178
Query: 182 ------NCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLW 220
+C + S HT + ++ DG S D +W
Sbjct: 179 ALDSDWDCTATL--SSHTSTVWSIDFDADGERLVSCSDDTTLKIW 221
Score = 142 (55.0 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 43/179 (24%), Positives = 74/179 (41%)
Query: 2 STETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLK 61
S+ + TL GH V ++ + K + +CSRD ++ IW++ DD + L
Sbjct: 89 SSGEFECNATLEGHENEVKSVSWS-KSGGLLATCSRDKSVWIWEVAGDD-EFECAAV-LN 145
Query: 62 GHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKT----TRRFEDHTKDVLSVAFSVD 117
H+ + +V S S+D T++++ +A + T HT V S+ F D
Sbjct: 146 PHTQDVKRVVWHPTKEILASASYDNTIKMFAESALDSDWDCTATLSSHTSTVWSIDFDAD 205
Query: 118 NRQIVSSSRDKTIKLWNTL--AHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRM 174
++VS S D T+K+W + D + W S H I W ++
Sbjct: 206 GERLVSCSDDTTLKIWRAYHPGNDAGVATPDKQTVWKCVCTLSGQHSRAIY-DVSWCKL 263
Score = 62 (26.9 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
Identities = 24/89 (26%), Positives = 38/89 (42%)
Query: 285 VLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKA-- 342
V S+ F D ++VS S D T+K+W V K+ V + + Q ++A
Sbjct: 197 VWSIDFDADGERLVSCSDDTTLKIWRAYHPGNDAGVATPDKQTVWKCVCTLSGQHSRAIY 256
Query: 343 DPPMC-----LSLAWSTDGQTLFAGYSDN 366
D C ++ A DG +F SD+
Sbjct: 257 DVSWCKLTGLIATACGDDGIRIFKESSDS 285
Score = 54 (24.1 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 283 RDVLSVAFS-VDNRQIVSSSRDKTIKLWNTL 312
+DV SV ++ V Q++S S D TIK+W L
Sbjct: 304 QDVNSVEWNPVMAGQLISCSDDGTIKIWKML 334
>RGD|708344 [details] [associations]
symbol:Gnb3 "guanine nucleotide binding protein (G protein), beta
polypeptide 3" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0043005 "neuron projection" evidence=IDA] [GO:0044297 "cell
body" evidence=IDA] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 RGD:708344 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043005 GO:GO:0004871
GO:GO:0044297 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS OrthoDB:EOG4J118C
EMBL:L29090 EMBL:BC086422 IPI:IPI00204239 PIR:I53871
RefSeq:NP_068630.1 UniGene:Rn.27065 ProteinModelPortal:P52287
SMR:P52287 STRING:P52287 PhosphoSite:P52287 PRIDE:P52287
Ensembl:ENSRNOT00000021481 GeneID:60449 KEGG:rno:60449
UCSC:RGD:708344 InParanoid:P52287 NextBio:612200
ArrayExpress:P52287 Genevestigator:P52287
GermOnline:ENSRNOG00000015541 Uniprot:P52287
Length = 340
Score = 207 (77.9 bits), Expect = 4.9e-15, Sum P(2) = 4.9e-15
Identities = 65/262 (24%), Positives = 115/262 (43%)
Query: 57 QKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 116
++ L+GH I + ++D +S S D L +WD + V++ A++
Sbjct: 48 RRTLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAP 107
Query: 117 DNRQIVSSSRDKTIKLWNTLA---HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDR 173
+ D +++ + + K + H+ ++SC RF + N I+ S+G D
Sbjct: 108 SGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDD--NNIVTSSG-DT 164
Query: 174 MVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV- 232
+W++ + K GHTG ++ VSPD L SG D +A LWD+ +G T
Sbjct: 165 TCALWDIETGQQKTVFVGHTGDCMSLAVSPDYKLFISGACDASAKLWDVREGTCRQTFTG 224
Query: 233 HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFF--SLFRDVLSVAF 290
H I A+CF PN I ++ L+ + + T + S+ + SVAF
Sbjct: 225 HESDINAICFFPNGEA------ICTGSDDASCRLFDLRADQELTAYSHESIICGITSVAF 278
Query: 291 SVDNRQIVSSSRDKTIKLWNTL 312
S+ R + + D +W++L
Sbjct: 279 SLSGRLLFAGYDDFNCNVWDSL 300
Score = 203 (76.5 bits), Expect = 2.6e-17, Sum P(2) = 2.6e-17
Identities = 63/247 (25%), Positives = 111/247 (44%)
Query: 6 LQLRGTLNGHNGWVTQI--ATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGH 63
++ R TL GH + + AT+ K ++S S+D LI+W + + +P +
Sbjct: 45 MRTRRTLRGHLAKIYAMHWATDSKL---LVSASQDGKLIVWDTYTTNKVHAIPLR----- 96
Query: 64 SHFISDIVLSSDGNYALSGSWDKTLRLWDLAA--G--KTTRRFEDHTKDVLSVAFSVDNR 119
S ++ + GN+ G D ++ L + G K +R HT LS +D+
Sbjct: 97 SSWVMTCAYAPSGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHT-GYLSCCRFLDDN 155
Query: 120 QIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
IV+SS D T LW+ + T+ GH+ + SP+++ + +S D K+W+
Sbjct: 156 NIVTSSGDTTCALWDIETGQQKTVFV-GHTGDCMSLAVSPDYK--LFISGACDASAKLWD 212
Query: 180 LTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDII-- 237
+ + +GH +N + P+G +G D + L+DL + L H II
Sbjct: 213 VREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTAYSHESIICG 272
Query: 238 -TALCFS 243
T++ FS
Sbjct: 273 ITSVAFS 279
Score = 183 (69.5 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 58/210 (27%), Positives = 93/210 (44%)
Query: 16 NGWVTQIATNPKFPDTILSCSR-DNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSS 74
+ WV A P ++C DN I+ L + N V + L H+ ++S
Sbjct: 97 SSWVMTCAYAPS--GNFVACGGLDNMCSIYSLKSREGNVKV-SRELSAHTGYLSCCRFLD 153
Query: 75 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 134
D N S S D T LWD+ G+ F HT D +S+A S D + +S + D + KLW+
Sbjct: 154 DNNIVTS-SGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDYKLFISGACDASAKLWD 212
Query: 135 TL-AHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL-TNCKLKI-NHSG 191
C+ T GH ++ + F PN + I + D ++++L + +L +H
Sbjct: 213 VREGTCRQTFT--GHESDINAICFFPNGE--AICTGSDDASCRLFDLRADQELTAYSHES 268
Query: 192 HTGYLNTVTVSPDGSLCASGGKDMNAMLWD 221
+ +V S G L +G D N +WD
Sbjct: 269 IICGITSVAFSLSGRLLFAGYDDFNCNVWD 298
Score = 178 (67.7 bits), Expect = 4.1e-14, Sum P(2) = 4.1e-14
Identities = 57/233 (24%), Positives = 100/233 (42%)
Query: 97 KTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVR 156
+T R H + ++ ++ D++ +VS+S+D + +W+T K + S WV
Sbjct: 46 RTRRTLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPL-RSSWVMTCA 104
Query: 157 FSPNHQNPIIVSAGWDRMVKVWNLT----NCKLKINHSGHTGYLNTVTVSPDGSLCASGG 212
++P+ + G D M +++L N K+ S HTGYL+ D ++ S G
Sbjct: 105 YAPSGN--FVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSG 162
Query: 213 KDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINH 271
D LWD+ G+ V H +L SP+ KL IS S L+ +
Sbjct: 163 -DTTCALWDIETGQQKTVFVGHTGDCMSLAVSPD-----YKLFISGACDASAK-LWDVRE 215
Query: 272 GKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLET 324
G F D+ ++ F + I + S D + +L++ A + T E+
Sbjct: 216 GTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTAYSHES 268
Score = 168 (64.2 bits), Expect = 5.9e-10, P = 5.9e-10
Identities = 49/178 (27%), Positives = 81/178 (45%)
Query: 4 ETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGH 63
ET Q + GH G +A +P + +S + D + +W D G ++ GH
Sbjct: 172 ETGQQKTVFVGHTGDCMSLAVSPDYK-LFISGACDASAKLW-----DVREGTCRQTFTGH 225
Query: 64 SHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGK--TTRRFEDHTKDVLSVAFSVDNRQI 121
I+ I +G +GS D + RL+DL A + T E + SVAFS+ R +
Sbjct: 226 ESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTAYSHESIICGITSVAFSLSGRLL 285
Query: 122 VSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
+ D +W++L C+ V GH + VSC+ + + + + WD +K+WN
Sbjct: 286 FAGYDDFNCNVWDSLK-CERVGVLSGHDNRVSCLGVTADGM--AVATGSWDSFLKIWN 340
Score = 164 (62.8 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 52/214 (24%), Positives = 97/214 (45%)
Query: 12 LNGHNGWVTQIATNPKFPD--TILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISD 69
L+ H G+++ +F D I++ S D T +W D G + GH+
Sbjct: 139 LSAHTGYLSCC----RFLDDNNIVTSSGDTTCALW-----DIETGQQKTVFVGHTGDCMS 189
Query: 70 IVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKT 129
+ +S D +SG+ D + +LWD+ G + F H D+ ++ F + I + S D +
Sbjct: 190 LAVSPDYKLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDAS 249
Query: 130 IKLWNTLAHCKFTIVE-DGHSDWVSCVRFSPNHQNPIIVSAGWDRM-VKVWNLTNCKLKI 187
+L++ A + T + ++ V FS + + ++ AG+D VW+ C+
Sbjct: 250 CRLFDLRADQELTAYSHESIICGITSVAFSLSGR---LLFAGYDDFNCNVWDSLKCERVG 306
Query: 188 NHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWD 221
SGH ++ + V+ DG A+G D +W+
Sbjct: 307 VLSGHDNRVSCLGVTADGMAVATGSWDSFLKIWN 340
Score = 66 (28.3 bits), Expect = 2.6e-17, Sum P(2) = 2.6e-17
Identities = 18/53 (33%), Positives = 25/53 (47%)
Query: 330 ELRPDVVSQSTKADPPMC--LSLAWSTDGQTLFAGYSDNTIRVWQVSVTSRGG 380
+LR D + + +C S+A+S G+ LFAGY D VW R G
Sbjct: 254 DLRADQELTAYSHESIICGITSVAFSLSGRLLFAGYDDFNCNVWDSLKCERVG 306
Score = 41 (19.5 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 285 VLSVAFSVDNRQIVSSSRDKTIKLWN 310
V + + D + + S D +K+WN
Sbjct: 315 VSCLGVTADGMAVATGSWDSFLKIWN 340
Score = 39 (18.8 bits), Expect = 4.9e-15, Sum P(2) = 4.9e-15
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 347 CLSLAWSTDGQTLFAGYSDNTIRVW 371
CL + + DG + G D+ +++W
Sbjct: 317 CLGV--TADGMAVATGSWDSFLKIW 339
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 228 (85.3 bits), Expect = 3.8e-16, P = 3.8e-16
Identities = 64/218 (29%), Positives = 101/218 (46%)
Query: 12 LNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV 71
L GH+G V +P D +LS S D T+ +W T+ + N KGH++ + D
Sbjct: 414 LLGHSGPVYSATFSPP-GDFVLSSSADTTIRLWS-TKLNANLVC----YKGHNYPVWDAQ 467
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
S G+Y S S D+T R+W + + R H DV V + + I + S DKT++
Sbjct: 468 FSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVR 527
Query: 132 LWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS 190
LW+ C + GH V + SP+ + + S D + +W+L+ +
Sbjct: 528 LWDVQTGECVRIFI--GHRSMVLSLAMSPDGR--YMASGDEDGTIMMWDLSTARCITPLM 583
Query: 191 GHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHL 228
GH + +++ S +GSL ASG D LWD+ L
Sbjct: 584 GHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKL 621
Score = 220 (82.5 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 53/185 (28%), Positives = 88/185 (47%)
Query: 60 LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 119
L GHS + S G++ LS S D T+RLW ++ H V FS
Sbjct: 414 LLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGH 473
Query: 120 QIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
S S D+T ++W+ + + + GH V CV++ PN I + D+ V++W+
Sbjct: 474 YFASCSHDRTARIWS-MDRIQPLRIMAGHLSDVDCVQWHPNCN--YIATGSSDKTVRLWD 530
Query: 180 LTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIIT 238
+ + GH + ++ +SPDG ASG +D M+WDL+ + + L+ HN +
Sbjct: 531 VQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVW 590
Query: 239 ALCFS 243
+L +S
Sbjct: 591 SLSYS 595
Score = 218 (81.8 bits), Expect = 5.5e-15, P = 5.5e-15
Identities = 65/198 (32%), Positives = 97/198 (48%)
Query: 14 GHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLS 73
GHN V +P F SCS D T IW + R P + + GH + +
Sbjct: 458 GHNYPVWDAQFSP-FGHYFASCSHDRTARIWSMDRIQ-----PLRIMAGHLSDVDCVQWH 511
Query: 74 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLW 133
+ NY +GS DKT+RLWD+ G+ R F H VLS+A S D R + S D TI +W
Sbjct: 512 PNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMW 571
Query: 134 N-TLAHCKFTIVEDGHSDWVSCV-RFSPNHQNPIIVSAGWDRMVKVWNLTNC-KL-KINH 189
+ + A C ++ GH+ SCV S + + ++ S D VK+W++T+ KL K
Sbjct: 572 DLSTARCITPLM--GHN---SCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLTKAEE 626
Query: 190 -SGHTGYLNTVTVSPDGS 206
+G++ L ++ P S
Sbjct: 627 KNGNSNRLRSLRTFPTKS 644
Score = 206 (77.6 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 67/274 (24%), Positives = 124/274 (45%)
Query: 72 LSSDGNYALSGSWDKTLRLWDLA----AGKTTRRFEDHTKD------------------- 108
+S DG+ G D ++++WD+A AG + E+ + D
Sbjct: 360 ISHDGSLVAGGFSDSSIKVWDMAKIGQAGSGALQAENDSSDQSIGPNGRRSYTLLLGHSG 419
Query: 109 -VLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSP-NHQNPII 166
V S FS ++SSS D TI+LW+T + + GH+ V +FSP H
Sbjct: 420 PVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYK-GHNYPVWDAQFSPFGHY---F 475
Query: 167 VSAGWDRMVKVWNLTNCK-LKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDG 225
S DR ++W++ + L+I +GH ++ V P+ + A+G D LWD+ G
Sbjct: 476 ASCSHDRTARIWSMDRIQPLRIM-AGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTG 534
Query: 226 KHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRD 284
+ + + H ++ +L SP+ + ++ + ++++ ++ + TP
Sbjct: 535 ECVRIFIGHRSMVLSLAMSPDGRY------MASGDEDGTIMMWDLSTARCITPLMGHNSC 588
Query: 285 VLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFT 318
V S+++S + + S S D T+KLW+ + K T
Sbjct: 589 VWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLT 622
Score = 61 (26.5 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 11/33 (33%), Positives = 24/33 (72%)
Query: 347 CL-SLAWSTDGQTLFAGYSDNTIRVWQVSVTSR 378
C+ SL++S +G L +G +D T+++W V+ +++
Sbjct: 588 CVWSLSYSGEGSLLASGSADCTVKLWDVTSSTK 620
>UNIPROTKB|B3KVK2 [details] [associations]
symbol:GNB1 "cDNA FLJ16663 fis, clone THYMU2005759, highly
similar to Guanine nucleotide-binding proteinG(I)/G(S)/G(T) subunit
beta 1" species:9606 "Homo sapiens" [GO:0001917 "photoreceptor
inner segment" evidence=IEA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IEA] [GO:0007200 "phospholipase C-activating
G-protein coupled receptor signaling pathway" evidence=IEA]
[GO:0007204 "elevation of cytosolic calcium ion concentration"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0010659 "cardiac muscle cell apoptotic process" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0042622 "photoreceptor
outer segment membrane" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 GO:GO:0001750
EMBL:AL109917 EMBL:AL031282 GO:GO:0050909 GO:GO:0005834
HOVERGEN:HBG000188 UniGene:Hs.430425 HGNC:HGNC:4396 ChiTaRS:GNB1
EMBL:AK122949 IPI:IPI00642117 ProteinModelPortal:B3KVK2 SMR:B3KVK2
STRING:B3KVK2 PRIDE:B3KVK2 Ensembl:ENST00000455156
OrthoDB:EOG4GHZR3 ArrayExpress:B3KVK2 Bgee:B3KVK2 Uniprot:B3KVK2
Length = 240
Score = 195 (73.7 bits), Expect = 4.9e-17, Sum P(2) = 4.9e-17
Identities = 57/207 (27%), Positives = 95/207 (45%)
Query: 38 DNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGK 97
DN I+ L + N V + L GH+ ++S D N ++ S D T LWD+ G+
Sbjct: 18 DNICSIYNLKTREGNVRV-SRELAGHTGYLSCCRFLDD-NQIVTSSGDTTCALWDIETGQ 75
Query: 98 TTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTL-AHCKFTIVEDGHSDWVSCVR 156
T F HT DV+S++ + D R VS + D + KLW+ C+ T GH ++ +
Sbjct: 76 QTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFT--GHESDINAIC 133
Query: 157 FSPNHQNPIIVSAGWDRMVKVWNLTNCK--LKINHSGHTGYLNTVTVSPDGSLCASGGKD 214
F PN N + D ++++L + + +H + +V+ S G L +G D
Sbjct: 134 FFPNG-NAFATGSD-DATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDD 191
Query: 215 MNAMLWDLNDGKHLHTLV-HNDIITAL 240
N +WD L H++ ++ L
Sbjct: 192 FNCNVWDALKADRAGVLAGHDNRVSCL 218
Score = 180 (68.4 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 60/239 (25%), Positives = 101/239 (42%)
Query: 76 GNYALSGSWDKTLRLWDLAA--G--KTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
GNY G D +++L G + +R HT LS +D+ QIV+SS D T
Sbjct: 9 GNYVACGGLDNICSIYNLKTREGNVRVSRELAGHT-GYLSCCRFLDDNQIVTSSGDTTCA 67
Query: 132 LWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSG 191
LW+ + + T GH+ V + +P+ + + VS D K+W++ + +G
Sbjct: 68 LWD-IETGQQTTTFTGHTGDVMSLSLAPDTR--LFVSGACDASAKLWDVREGMCRQTFTG 124
Query: 192 HTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCFSPNRSFQKI 251
H +N + P+G+ A+G D L+DL + L T H++II C + SF K
Sbjct: 125 HESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNII---CGITSVSFSKS 181
Query: 252 KLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWN 310
+ N ++ V + + D + + S D +K+WN
Sbjct: 182 GRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 240
Score = 175 (66.7 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 47/167 (28%), Positives = 82/167 (49%)
Query: 147 GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGS 206
GH+ ++SC RF ++Q I+ S+G D +W++ + +GHTG + +++++PD
Sbjct: 41 GHTGYLSCCRFLDDNQ--IVTSSG-DTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTR 97
Query: 207 LCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLI 265
L SG D +A LWD+ +G T H I A+CF PN + D T + +L
Sbjct: 98 LFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSD-DATCRLFDL- 155
Query: 266 LYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTL 312
+ M ++ + SV+FS R +++ D +W+ L
Sbjct: 156 --RADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL 200
Score = 163 (62.4 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 52/214 (24%), Positives = 94/214 (43%)
Query: 12 LNGHNGWVTQIATNPKFPDT--ILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISD 69
L GH G+++ +F D I++ S D T +W D G GH+ +
Sbjct: 39 LAGHTGYLSCC----RFLDDNQIVTSSGDTTCALW-----DIETGQQTTTFTGHTGDVMS 89
Query: 70 IVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKT 129
+ L+ D +SG+ D + +LWD+ G + F H D+ ++ F + + S D T
Sbjct: 90 LSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDAT 149
Query: 130 IKLWNTLAHCKF-TIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRM-VKVWNLTNCKLKI 187
+L++ A + T D ++ V FS + + ++ AG+D VW+
Sbjct: 150 CRLFDLRADQELMTYSHDNIICGITSVSFSKSGR---LLLAGYDDFNCNVWDALKADRAG 206
Query: 188 NHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWD 221
+GH ++ + V+ DG A+G D +W+
Sbjct: 207 VLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 240
Score = 160 (61.4 bits), Expect = 9.2e-10, P = 9.2e-10
Identities = 51/180 (28%), Positives = 83/180 (46%)
Query: 4 ETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSR--DNTLIIWKLTRDDTNYGVPQKRLK 61
ET Q T GH G V ++ P DT L S D + +W D G+ ++
Sbjct: 72 ETGQQTTTFTGHTGDVMSLSLAP---DTRLFVSGACDASAKLW-----DVREGMCRQTFT 123
Query: 62 GHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKT--TRRFEDHTKDVLSVAFSVDNR 119
GH I+ I +GN +GS D T RL+DL A + T ++ + SV+FS R
Sbjct: 124 GHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGR 183
Query: 120 QIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
+++ D +W+ L + ++ GH + VSC+ + + + + WD +K+WN
Sbjct: 184 LLLAGYDDFNCNVWDALKADRAGVLA-GHDNRVSCLGVTDDGM--AVATGSWDSFLKIWN 240
Score = 38 (18.4 bits), Expect = 4.9e-17, Sum P(2) = 4.9e-17
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 347 CLSLAWSTDGQTLFAGYSDNTIRVW 371
CL + + DG + G D+ +++W
Sbjct: 217 CLGV--TDDGMAVATGSWDSFLKIW 239
>UNIPROTKB|I3LSG8 [details] [associations]
symbol:I3LSG8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043531 "ADP binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00931 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GeneTree:ENSGT00700000104017 ProteinModelPortal:I3LSG8
Ensembl:ENSSSCT00000028858 OMA:LRERVAC Uniprot:I3LSG8
Length = 994
Score = 219 (82.2 bits), Expect = 5.4e-17, Sum P(3) = 5.4e-17
Identities = 49/163 (30%), Positives = 81/163 (49%)
Query: 60 LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 119
++ H+ + S DG S DKTL+++ G+ + H +VL AFS D+R
Sbjct: 347 VRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSADDR 406
Query: 120 QIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
I + S DK +K+WN++ + D HS+ V+C F+ N + ++ + D +K+W+
Sbjct: 407 FIATCSVDKKVKIWNSVTG-ELVQSYDEHSEQVNCCHFTNNSNHLLLATGSSDYFLKLWD 465
Query: 180 LTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
L + + GHT ++ SPD L AS D LWD+
Sbjct: 466 LNQKECRNTMFGHTNSVSHCRFSPDDKLLASCSADGTLKLWDV 508
Score = 192 (72.6 bits), Expect = 8.7e-12, P = 8.7e-12
Identities = 59/224 (26%), Positives = 102/224 (45%)
Query: 21 QIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYAL 80
Q T+ K ++S S D+ + +W ++T L+ H + D L + L
Sbjct: 755 QFTTDGK---NVISSSDDSAIQVWNWQSEET------VSLQAHQETVKDFRLLKNSRL-L 804
Query: 81 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCK 140
S S+D T+++W++ G+ + F H VLS S D + S+S DKT K+W+
Sbjct: 805 SWSFDGTVKVWNIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIWSFDLLSP 864
Query: 141 FTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDR-MVKVWNLTN------CKLKINHSG-- 191
+ GH V C FS + +++ G D +++WN++N C + G
Sbjct: 865 LHELR-GHKGCVRCSAFSVDST---LLATGDDNGEIRIWNVSNGELLHSCAPVLVEGGAA 920
Query: 192 -HTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHN 234
H G++ + SPDG + S G + W+++ GK + T N
Sbjct: 921 THGGWVTDLRFSPDGKMLVSAGGYLK--WWNVDSGKSIQTFYTN 962
Score = 160 (61.4 bits), Expect = 5.2e-10, Sum P(3) = 5.2e-10
Identities = 58/241 (24%), Positives = 114/241 (47%)
Query: 32 ILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLW 91
I SC D TL ++K +T G +K H + S+D + + S DK +++W
Sbjct: 366 IASCGADKTLQVFKA---ET--GEKLLEIKAHEDEVLCCAFSADDRFIATCSVDKKVKIW 420
Query: 92 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV--SSSRDKTIKLWN-TLAHCKFTIVEDGH 148
+ G+ + +++H++ V F+ ++ ++ + S D +KLW+ C+ T+ GH
Sbjct: 421 NSVTGELVQSYDEHSEQVNCCHFTNNSNHLLLATGSSDYFLKLWDLNQKECRNTMF--GH 478
Query: 149 SDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNT--------VT 200
++ VS RFSP+ + ++ S D +K+W++ + + + + +LN+ V
Sbjct: 479 TNSVSHCRFSPDDK--LLASCSADGTLKLWDVKSANERKSINVKQFFLNSEESQEDMEVM 536
Query: 201 V-----SPDGSLCASGGKDMNAMLWDLNDG---KHLHTLVHNDIITALCFSPNRSFQKIK 252
V S DG+ K+ +L++++ G +HT H+ I FSP+ +
Sbjct: 537 VKCCSWSADGASLVVAAKN-KVLLFNIHTGGLLAEIHT-GHHSTIQYCDFSPSNHLAVVA 594
Query: 253 L 253
L
Sbjct: 595 L 595
Score = 158 (60.7 bits), Expect = 1.7e-10, Sum P(3) = 1.7e-10
Identities = 46/192 (23%), Positives = 85/192 (44%)
Query: 56 PQKRLKG---HSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSV 112
PQKR K F+ + + + L + +L++ +L + + H V +
Sbjct: 695 PQKRKKKMIPDQSFMVSCIQGTSECFVLGDVYGHSLKVLELLNNRLFQSRTRHKNTVRHI 754
Query: 113 AFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWD 172
F+ D + ++SSS D I++WN + + T+ H + V R N + ++S +D
Sbjct: 755 QFTTDGKNVISSSDDSAIQVWNWQS--EETVSLQAHQETVKDFRLLKNSR---LLSWSFD 809
Query: 173 RMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV 232
VKVWN+ +++ + H + + +SPD + +S D A +W + LH L
Sbjct: 810 GTVKVWNIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIWSFDLLSPLHELR 869
Query: 233 -HNDIITALCFS 243
H + FS
Sbjct: 870 GHKGCVRCSAFS 881
Score = 61 (26.5 bits), Expect = 1.7e-10, Sum P(3) = 1.7e-10
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 7 QLRGTLNGHNGWVTQIATNPKFPDTIL-SCSRDNTLIIW 44
+ R T+ GH V+ +P D +L SCS D TL +W
Sbjct: 470 ECRNTMFGHTNSVSHCRFSPD--DKLLASCSADGTLKLW 506
Score = 54 (24.1 bits), Expect = 5.4e-17, Sum P(3) = 5.4e-17
Identities = 18/64 (28%), Positives = 30/64 (46%)
Query: 294 NRQIVSSSRDKTIKLWNTLA-HCKFTIVDLETKKMVEELRPDVVS-QSTKADPPMCLSLA 351
N +++S S D T+K+WN + + V + + ++ PD ST AD +
Sbjct: 800 NSRLLSWSFDGTVKVWNIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKI--- 856
Query: 352 WSTD 355
WS D
Sbjct: 857 WSFD 860
Score = 49 (22.3 bits), Expect = 5.4e-17, Sum P(3) = 5.4e-17
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 351 AWSTDGQTLFAGYSDNTIRVWQVS 374
A+S D L G + IR+W VS
Sbjct: 879 AFSVDSTLLATGDDNGEIRIWNVS 902
Score = 49 (22.3 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 15/60 (25%), Positives = 29/60 (48%)
Query: 313 AHCKFTIVDLETKKM-VEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVW 371
+ C F + D+ + V EL + + QS + ++TDG+ + + D+ I+VW
Sbjct: 717 SEC-FVLGDVYGHSLKVLELLNNRLFQSRTRHKNTVRHIQFTTDGKNVISSSDDSAIQVW 775
Score = 39 (18.8 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 24/101 (23%), Positives = 44/101 (43%)
Query: 286 LSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQ-STKADP 344
L V ++NR S +R K NT+ H +FT + K ++ + + +++
Sbjct: 730 LKVLELLNNRLFQSRTRHK-----NTVRHIQFTT---DGKNVISSSDDSAIQVWNWQSEE 781
Query: 345 PMCLSLAWST--DGQTL----FAGYS-DNTIRVWQVSVTSR 378
+ L T D + L +S D T++VW + +T R
Sbjct: 782 TVSLQAHQETVKDFRLLKNSRLLSWSFDGTVKVWNI-ITGR 821
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 224 (83.9 bits), Expect = 5.6e-17, Sum P(2) = 5.6e-17
Identities = 63/233 (27%), Positives = 106/233 (45%)
Query: 15 HNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSS 74
H+G V ++ K +L+ D + +W + + + P L GH+ + + +S
Sbjct: 14 HSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTS----PMS-LCGHTSPVDSVAFNS 68
Query: 75 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 134
+ L+G+ ++LWDL K R F H + +V F + S S D +++W+
Sbjct: 69 EEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWD 128
Query: 135 TLAH-CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHT 193
T C T GH+ +S + FSP+ + +VS G D +VKVW+LT KL H
Sbjct: 129 TRKKGCIQTY--KGHTRGISTIEFSPDGR--WVVSGGLDNVVKVWDLTAGKLLHEFKCHE 184
Query: 194 GYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDI-ITALCFSPN 245
G + ++ P L A+G D WDL + + T + A+ F P+
Sbjct: 185 GPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPD 237
Score = 169 (64.5 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 52/183 (28%), Positives = 81/183 (44%)
Query: 4 ETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGH 63
E+ +R GH + + +P F + + S S D L +W D G Q KGH
Sbjct: 89 ESKMVRA-FTGHRSNCSAVEFHP-FGEFLASGSSDTNLRVW----DTRKKGCIQT-YKGH 141
Query: 64 SHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 123
+ IS I S DG + +SG D +++WDL AGK F+ H + S+ F + +
Sbjct: 142 TRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLAT 201
Query: 124 SSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKV--WNLT 181
S D+T+K W+ L + + V + F P+ Q + G D +KV W
Sbjct: 202 GSADRTVKFWD-LETFELIGTTRPEATGVRAIAFHPDGQT---LFCGLDDGLKVYSWEPV 257
Query: 182 NCK 184
C+
Sbjct: 258 ICR 260
Score = 161 (61.7 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 52/213 (24%), Positives = 86/213 (40%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
+L GH V +A N + +L+ + + +W L + GH S +
Sbjct: 53 SLCGHTSPVDSVAFNSE-EVLVLAGASSGVIKLWDLEESKM-----VRAFTGHRSNCSAV 106
Query: 71 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 130
G + SGS D LR+WD + ++ HT+ + ++ FS D R +VS D +
Sbjct: 107 EFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVV 166
Query: 131 KLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKL-KINH 189
K+W+ A K H + + F P ++ + DR VK W+L +L
Sbjct: 167 KVWDLTAG-KLLHEFKCHEGPIRSLDFHPLEF--LLATGSADRTVKFWDLETFELIGTTR 223
Query: 190 SGHTGYLNTVTVSPDGSLCASGGKD-MNAMLWD 221
TG + + PDG G D + W+
Sbjct: 224 PEATG-VRAIAFHPDGQTLFCGLDDGLKVYSWE 255
Score = 145 (56.1 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 57/243 (23%), Positives = 105/243 (43%)
Query: 96 GKTTRRFEDHTKDV--LSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVS 153
G + F H+ +V LS+ +R +++ D + LW+ + + GH+ V
Sbjct: 5 GYKLQEFVAHSGNVNCLSIGKKT-SRLLLTGGDDYKVNLWS-IGKTTSPMSLCGHTSPVD 62
Query: 154 CVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGK 213
V F N + ++++ ++K+W+L K+ +GH + V P G ASG
Sbjct: 63 SVAF--NSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSS 120
Query: 214 DMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLI-LYPINH 271
D N +WD + T H I+ + FSP+ + +S L N++ ++ +
Sbjct: 121 DTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWV-----VSGGLD--NVVKVWDLTA 173
Query: 272 GKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEEL 331
GK+ F + S+ F + + S D+T+K W DLET +++
Sbjct: 174 GKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFW-----------DLETFELIGTT 222
Query: 332 RPD 334
RP+
Sbjct: 223 RPE 225
Score = 59 (25.8 bits), Expect = 5.6e-17, Sum P(2) = 5.6e-17
Identities = 20/61 (32%), Positives = 29/61 (47%)
Query: 321 DLETKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNT-IRVWQVSVTSRG 379
DLET +++ RP+ +A +A+ DGQTLF G D + W+ V R
Sbjct: 212 DLETFELIGTTRPEATG--VRA-------IAFHPDGQTLFCGLDDGLKVYSWE-PVICRD 261
Query: 380 G 380
G
Sbjct: 262 G 262
>RGD|621047 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1" species:10116 "Rattus
norvegicus" [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:621047 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF128241 EMBL:BC087742 IPI:IPI00203832 RefSeq:NP_068525.1
UniGene:Rn.44181 ProteinModelPortal:Q9WUC8 STRING:Q9WUC8
PRIDE:Q9WUC8 Ensembl:ENSRNOT00000009113 GeneID:60376 KEGG:rno:60376
UCSC:RGD:621047 InParanoid:Q9WUC8 NextBio:612055
Genevestigator:Q9WUC8 GermOnline:ENSRNOG00000006655 Uniprot:Q9WUC8
Length = 514
Score = 233 (87.1 bits), Expect = 5.7e-17, P = 5.7e-17
Identities = 74/306 (24%), Positives = 129/306 (42%)
Query: 7 QLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHF 66
+L ++GH GWV IA P ++ S D T+ IW L G + L GH
Sbjct: 195 KLYRVISGHLGWVRCIAVEPG-NQWFVTGSADRTIKIWDLAS-----GKLKLSLTGHIST 248
Query: 67 ISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSR 126
+ +++S+ Y S DK ++ WDL K R + H V + +V+ SR
Sbjct: 249 VRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSR 308
Query: 127 DKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLK 186
D T ++W+ + GH++ V+ VR P I++ D +++W+L K +
Sbjct: 309 DSTARIWDVRTKASVHTLS-GHTNAVATVRCQA--AEPQIITGSHDTTIRLWDLVAGKTR 365
Query: 187 INHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPN 245
+ + H + V + P ASG D N W DG + L HN II L + +
Sbjct: 366 VTLTNHKKSVRAVVLHPLHYTFASGSPD-NIKQWKFPDGGFIQNLSGHNAIINTLAVNTD 424
Query: 246 RSFQKIKLDISRTLQ--KSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRD 303
+ + L ++ + H ++ + + AF +++++ D
Sbjct: 425 GVLVSGADNGTMHLWDWRTGYNFQRV-HAAVQPGSLDSESGIFACAFDRSESRLLTAEAD 483
Query: 304 KTIKLW 309
KTIK++
Sbjct: 484 KTIKVY 489
Score = 158 (60.7 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 48/172 (27%), Positives = 74/172 (43%)
Query: 144 VEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSP 203
V GH WV C+ P +Q + SA DR +K+W+L + KLK++ +GH + V VS
Sbjct: 199 VISGHLGWVRCIAVEPGNQWFVTGSA--DRTIKIWDLASGKLKLSLTGHISTVRGVIVST 256
Query: 204 DGSLCASGGKDMNAMLWDLNDGKHL-HTLVHNDIITALCFSPNRSFQKIKLDISRTLQK- 261
S G+D WDL K + H H + L P +D+ T +
Sbjct: 257 RSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPT-------IDVLVTCSRD 309
Query: 262 SNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA 313
S ++ + V +V QI++ S D TI+LW+ +A
Sbjct: 310 STARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVA 361
>UNIPROTKB|F1NLV4 [details] [associations]
symbol:GNB1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001750 "photoreceptor outer segment" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005834
"heterotrimeric G-protein complex" evidence=IEA] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0060041 "retina development in camera-type eye" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007200 GO:GO:0001750
PRINTS:PR00319 GO:GO:0005834 GeneTree:ENSGT00550000074331
OMA:CMLWDIE InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:AADN02040871
IPI:IPI00596111 Ensembl:ENSGALT00000002040
Ensembl:ENSGALT00000040376 Uniprot:F1NLV4
Length = 403
Score = 210 (79.0 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 63/260 (24%), Positives = 115/260 (44%)
Query: 57 QKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 116
++ L+GH I + +D +S S D L +WD + V++ A++
Sbjct: 48 RRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAP 107
Query: 117 DNRQIVSSSRDKTIKLWNTLA---HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDR 173
+ D ++N + + + GH+ ++SC RF ++Q I+ S+G D
Sbjct: 108 SGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ--IVTSSG-DT 164
Query: 174 MVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV- 232
+W++ + +GHTG + +++++PD SG D +A LWD+ +G T
Sbjct: 165 TCALWDIETGQQTTTFTGHTGDVMSLSLAPDARCFVSGACDASAKLWDVREGMCRQTFTG 224
Query: 233 HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSV 292
H I A+CF PN + D T + +L + M ++ + SVAFS
Sbjct: 225 HESDINAICFFPNGNAFATGSD-DATCRLFDL---RADQELMVYSHDNIICGITSVAFSK 280
Query: 293 DNRQIVSSSRDKTIKLWNTL 312
R +++ D +W+TL
Sbjct: 281 SGRLLLAGYDDFNCNVWDTL 300
Score = 204 (76.9 bits), Expect = 5.9e-17, Sum P(2) = 5.9e-17
Identities = 65/247 (26%), Positives = 113/247 (45%)
Query: 6 LQLRGTLNGHNGWVTQI--ATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGH 63
++ R TL GH + + T+ + ++S S+D LIIW + + +P +
Sbjct: 45 MRTRRTLRGHLAKIYAMHWGTDSRL---LVSASQDGKLIIWDSYTTNKVHAIPLR----- 96
Query: 64 SHFISDIVLSSDGNYALSGSWDKTLRLWDLAA--G--KTTRRFEDHTKDVLSVAFSVDNR 119
S ++ + GNY G D +++L G + +R HT LS +D+
Sbjct: 97 SSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHT-GYLSCCRFLDDN 155
Query: 120 QIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
QIV+SS D T LW+ + + T GH+ V + +P+ + VS D K+W+
Sbjct: 156 QIVTSSGDTTCALWD-IETGQQTTTFTGHTGDVMSLSLAPDAR--CFVSGACDASAKLWD 212
Query: 180 LTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDII-- 237
+ + +GH +N + P+G+ A+G D L+DL + L H++II
Sbjct: 213 VREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMVYSHDNIICG 272
Query: 238 -TALCFS 243
T++ FS
Sbjct: 273 ITSVAFS 279
Score = 201 (75.8 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 63/230 (27%), Positives = 104/230 (45%)
Query: 16 NGWVTQIATNPKFPDTILSCSR-DNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSS 74
+ WV A P ++C DN I+ L + N V + L GH+ ++S
Sbjct: 97 SSWVMTCAYAPS--GNYVACGGLDNICSIYNLKTREGNVRV-SRELAGHTGYLSCCRFLD 153
Query: 75 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 134
D N ++ S D T LWD+ G+ T F HT DV+S++ + D R VS + D + KLW+
Sbjct: 154 D-NQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDARCFVSGACDASAKLWD 212
Query: 135 TL-AHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL-TNCKLKI-NHSG 191
C+ T GH ++ + F PN N + D ++++L + +L + +H
Sbjct: 213 VREGMCRQTFT--GHESDINAICFFPNG-NAFATGSD-DATCRLFDLRADQELMVYSHDN 268
Query: 192 HTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITAL 240
+ +V S G L +G D N +WD L H++ ++ L
Sbjct: 269 IICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKADRAGVLAGHDNRVSCL 318
Score = 173 (66.0 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 52/223 (23%), Positives = 94/223 (42%)
Query: 97 KTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVR 156
+T R H + ++ + D+R +VS+S+D + +W++ K + S WV
Sbjct: 46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL-RSSWVMTCA 104
Query: 157 FSPNHQNPIIVSAGWDRMVKVWNLT----NCKLKINHSGHTGYLNTVTVSPDGSLCASGG 212
++P+ + G D + ++NL N ++ +GHTGYL+ D + S G
Sbjct: 105 YAPSGN--YVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG 162
Query: 213 KDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPN-RSFQKIKLDISRTLQKSNLILYPIN 270
D LWD+ G+ T H + +L +P+ R F D S L + +
Sbjct: 163 -DTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDARCFVSGACDASAKL-------WDVR 214
Query: 271 HGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA 313
G F D+ ++ F + + S D T +L++ A
Sbjct: 215 EGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRA 257
Score = 134 (52.2 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 45/155 (29%), Positives = 71/155 (45%)
Query: 4 ETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGH 63
ET Q T GH G V ++ P +S + D + +W D G+ ++ GH
Sbjct: 172 ETGQQTTTFTGHTGDVMSLSLAPD-ARCFVSGACDASAKLW-----DVREGMCRQTFTGH 225
Query: 64 SHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK---DVLSVAFSVDNRQ 120
I+ I +GN +GS D T RL+DL A + + H + SVAFS R
Sbjct: 226 ESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMVYS-HDNIICGITSVAFSKSGRL 284
Query: 121 IVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCV 155
+++ D +W+TL + ++ GH + VSC+
Sbjct: 285 LLAGYDDFNCNVWDTLKADRAGVLA-GHDNRVSCL 318
Score = 67 (28.6 bits), Expect = 5.9e-17, Sum P(2) = 5.9e-17
Identities = 18/53 (33%), Positives = 23/53 (43%)
Query: 330 ELRPDVVSQSTKADPPMC--LSLAWSTDGQTLFAGYSDNTIRVWQVSVTSRGG 380
+LR D D +C S+A+S G+ L AGY D VW R G
Sbjct: 254 DLRADQELMVYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKADRAG 306
>ZFIN|ZDB-GENE-030131-6305 [details] [associations]
symbol:fbxw11a "F-box and WD-40 domain protein
11a" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-030131-6305 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
HSSP:Q9Y297 GeneTree:ENSGT00690000101849 EMBL:CABZ01001943
EMBL:CABZ01001944 EMBL:CABZ01001945 EMBL:CABZ01001946 EMBL:BC045356
IPI:IPI00502564 RefSeq:NP_958467.1 UniGene:Dr.78612 SMR:Q7ZVZ1
STRING:Q7ZVZ1 Ensembl:ENSDART00000036901 GeneID:334373
KEGG:dre:334373 CTD:334373 OMA:MESQINT NextBio:20810369
Uniprot:Q7ZVZ1
Length = 527
Score = 233 (87.1 bits), Expect = 6.1e-17, P = 6.1e-17
Identities = 85/292 (29%), Positives = 134/292 (45%)
Query: 30 DTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLR 89
D I+S RDN++ IW D + K L GH+ + + L D ++GS D T+R
Sbjct: 236 DKIISGLRDNSIKIW----DKQSLEC-LKVLTGHTGSV--LCLQYDERVIVTGSSDSTVR 288
Query: 90 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTI--VEDG 147
+WD+++G+ H + VL + F N +V+ S+D++I +W+ + ++ V G
Sbjct: 289 VWDVSSGEVLNTLIHHNEAVLHLRFC--NGLMVTCSKDRSIAVWDMASATDISLRRVLVG 346
Query: 148 HSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSL 207
H V+ V F + IVSA DR +KVW+ + C+ +GH + + L
Sbjct: 347 HRAAVNVVDFDDKY----IVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RL 400
Query: 208 CASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQ-----KIKL-DISRTLQ 260
SG D LWD+ G L L H +++ + F R KIK+ D+ L
Sbjct: 401 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALD 460
Query: 261 KSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTL 312
P + + T R V + F D QI+SSS D TI +W+ L
Sbjct: 461 PRA----PASTLCLRTLVEHSGR-VFRLQF--DEFQIISSSHDDTILIWDFL 505
Score = 164 (62.8 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 58/191 (30%), Positives = 87/191 (45%)
Query: 2 STETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLK 61
S + LR L GH V + + K+ I+S S D T+ +W + + + L
Sbjct: 334 SATDISLRRVLVGHRAAVNVVDFDDKY---IVSASGDRTIKVWSTSTCEF-----VRTLN 385
Query: 62 GHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 121
GH I+ L +SGS D T+RLWD+ G R E H + V + F DN++I
Sbjct: 386 GHKRGIA--CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRI 441
Query: 122 VSSSRDKTIKLWNTLAH----------CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGW 171
VS + D IK+W+ A C T+VE HS V ++F Q I+S+
Sbjct: 442 VSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVE--HSGRVFRLQFD-EFQ---IISSSH 495
Query: 172 DRMVKVWNLTN 182
D + +W+ N
Sbjct: 496 DDTILIWDFLN 506
Score = 157 (60.3 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08
Identities = 63/247 (25%), Positives = 113/247 (45%)
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
L D + +SG D ++++WD + + + HT VL + + D R IV+ S D T++
Sbjct: 231 LQYDDDKIISGLRDNSIKIWDKQSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVR 288
Query: 132 LWNTLA-HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL---TNCKLKI 187
+W+ + T++ H++ V +RF N ++V+ DR + VW++ T+ L+
Sbjct: 289 VWDVSSGEVLNTLIH--HNEAVLHLRFC----NGLMVTCSKDRSIAVWDMASATDISLRR 342
Query: 188 NHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNR 246
GH +N V + ASG D +W + + + TL H I L +
Sbjct: 343 VLVGHRAAVNVVDFDDKYIVSASG--DRTIKVWSTSTCEFVRTLNGHKRGIACLQY---- 396
Query: 247 SFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTI 306
+ +L +S + + + L+ I G V + F DN++IVS + D I
Sbjct: 397 ---RDRLVVSGS-SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKI 450
Query: 307 KLWNTLA 313
K+W+ A
Sbjct: 451 KVWDLQA 457
Score = 138 (53.6 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 47/158 (29%), Positives = 73/158 (46%)
Query: 2 STETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLK 61
ST T + TLNGH + + + ++S S DNT+ +W D G + L+
Sbjct: 374 STSTCEFVRTLNGHKRGIACLQYRDRL---VVSGSSDNTIRLW-----DIECGACLRVLE 425
Query: 62 GHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAG------KTT---RRFEDHTKDVLSV 112
GH + I D +SG++D +++WDL A +T R +H+ V +
Sbjct: 426 GHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRL 483
Query: 113 AFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSD 150
F D QI+SSS D TI +W+ L + +G SD
Sbjct: 484 QF--DEFQIISSSHDDTILIWDFL-----NVSSNGQSD 514
Score = 37 (18.1 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 355 DGQTLFAGYSDNTIRVWQV 373
D + + +G D I+VW +
Sbjct: 437 DNKRIVSGAYDGKIKVWDL 455
>UNIPROTKB|E1BVN5 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
CTD:5356 GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK
EMBL:AADN02016546 IPI:IPI00576149 RefSeq:XP_420368.2
UniGene:Gga.9982 ProteinModelPortal:E1BVN5
Ensembl:ENSGALT00000015067 GeneID:422401 KEGG:gga:422401
NextBio:20825038 Uniprot:E1BVN5
Length = 516
Score = 232 (86.7 bits), Expect = 7.5e-17, P = 7.5e-17
Identities = 64/235 (27%), Positives = 102/235 (43%)
Query: 7 QLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHF 66
+L ++GH GWV IA P ++ S D T+ IW L G + L GH
Sbjct: 197 KLYRVISGHLGWVRCIAVEPG-NQWFVTGSADRTIKIWDLAS-----GKLKLSLTGHIST 250
Query: 67 ISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSR 126
+ +++S+ Y S DK ++ WDL K R + H V + +V+ SR
Sbjct: 251 VRGVIVSARSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSR 310
Query: 127 DKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLK 186
D T ++W+ + GH++ V+ V+ P +V+ D +++W+L K +
Sbjct: 311 DSTARIWDVRTKASVHTLS-GHTNAVATVKCQA--AEPQVVTGSHDTTIRLWDLVAGKTR 367
Query: 187 INHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITAL 240
+ + H + V + P ASG D N W DG + L HN II L
Sbjct: 368 VTLTNHKKSVRAVILHPRHYTFASGSPD-NIKQWKFPDGNFIQNLSGHNAIINTL 421
Score = 213 (80.0 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 62/227 (27%), Positives = 95/227 (41%)
Query: 7 QLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHF 66
+L+ +L GH V + + + P + SC D + W D Y + GH
Sbjct: 239 KLKLSLTGHISTVRGVIVSARSP-YLFSCGEDKQVKCW-----DLEYNKVIRHYHGHLSA 292
Query: 67 ISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSR 126
+ + L + ++ S D T R+WD+ + HT V +V Q+V+ S
Sbjct: 293 VYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVKCQAAEPQVVTGSH 352
Query: 127 DKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLK 186
D TI+LW+ +A K + H V V P H ++G +K W +
Sbjct: 353 DTTIRLWDLVAG-KTRVTLTNHKKSVRAVILHPRHYT---FASGSPDNIKQWKFPDGNFI 408
Query: 187 INHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVH 233
N SGH +NT+TV+ DG L SG + LWD G + VH
Sbjct: 409 QNLSGHNAIINTLTVNSDGVL-VSGADNGTMHLWDWRTGYNFQR-VH 453
Score = 186 (70.5 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 51/187 (27%), Positives = 82/187 (43%)
Query: 60 LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 119
+ GH ++ I + + ++GS D+T+++WDLA+GK H V V S +
Sbjct: 202 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSARSP 261
Query: 120 QIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
+ S DK +K W+ L + K GH V + P ++V+ D ++W+
Sbjct: 262 YLFSCGEDKQVKCWD-LEYNKVIRHYHGHLSAVYGLDLHPTID--VLVTCSRDSTARIWD 318
Query: 180 LTNCKLKINH-SGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDII 237
+ K ++ SGHT + TV +G D LWDL GK TL H +
Sbjct: 319 VRT-KASVHTLSGHTNAVATVKCQAAEPQVVTGSHDTTIRLWDLVAGKTRVTLTNHKKSV 377
Query: 238 TALCFSP 244
A+ P
Sbjct: 378 RAVILHP 384
Score = 158 (60.7 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 48/172 (27%), Positives = 74/172 (43%)
Query: 144 VEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSP 203
V GH WV C+ P +Q + SA DR +K+W+L + KLK++ +GH + V VS
Sbjct: 201 VISGHLGWVRCIAVEPGNQWFVTGSA--DRTIKIWDLASGKLKLSLTGHISTVRGVIVSA 258
Query: 204 DGSLCASGGKDMNAMLWDLNDGKHL-HTLVHNDIITALCFSPNRSFQKIKLDISRTLQK- 261
S G+D WDL K + H H + L P +D+ T +
Sbjct: 259 RSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPT-------IDVLVTCSRD 311
Query: 262 SNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA 313
S ++ + V +V Q+V+ S D TI+LW+ +A
Sbjct: 312 STARIWDVRTKASVHTLSGHTNAVATVKCQAAEPQVVTGSHDTTIRLWDLVA 363
Score = 156 (60.0 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 56/215 (26%), Positives = 91/215 (42%)
Query: 97 KTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVR 156
K R H V +A N+ V+ S D+TIK+W+ LA K + GH V V
Sbjct: 197 KLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWD-LASGKLKLSLTGHISTVRGVI 255
Query: 157 FSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMN 216
S ++P + S G D+ VK W+L K+ ++ GH + + + P + + +D
Sbjct: 256 VSA--RSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDST 313
Query: 217 AMLWDLNDGKHLHTLV-H-NDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKM 274
A +WD+ +HTL H N + T C Q + + + + L+ + GK
Sbjct: 314 ARIWDVRTKASVHTLSGHTNAVATVKC-------QAAEPQVVTGSHDTTIRLWDLVAGKT 366
Query: 275 ETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLW 309
+ + V +V + S S D IK W
Sbjct: 367 RVTLTNHKKSVRAVILHPRHYTFASGSPDN-IKQW 400
>UNIPROTKB|Q05B17 [details] [associations]
symbol:wdr48 "WD repeat-containing protein 48" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0016579 "protein deubiquitination" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005764 GO:GO:0016579 KO:K15361 InterPro:IPR021772
Pfam:PF11816 CTD:57599 HOGENOM:HOG000007343
GeneTree:ENSGT00520000055738 OMA:NRLYSAG EMBL:BC123017
RefSeq:NP_001072858.1 UniGene:Str.41632 ProteinModelPortal:Q05B17
STRING:Q05B17 Ensembl:ENSXETT00000009249 GeneID:780319
KEGG:xtr:780319 Xenbase:XB-GENE-976371 Bgee:Q05B17 Uniprot:Q05B17
Length = 678
Score = 225 (84.3 bits), Expect = 8.0e-17, Sum P(2) = 8.0e-17
Identities = 60/234 (25%), Positives = 112/234 (47%)
Query: 16 NGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSD 75
NG V + +P + + + RD+ + IW + + + + ++ H+ +++DIVL +
Sbjct: 31 NG-VNALQLDPAL-NRLFTAGRDSIIRIWNVNQHKQDPYIAS--MEHHTDWVNDIVLCCN 86
Query: 76 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLW-- 133
G +S S D T+++W+ G H V ++A++ D + S+ D+ I LW
Sbjct: 87 GKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDV 146
Query: 134 NTLAHCKF---TIVED---GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKI 187
NTL T+ G+ D S + N +IVS +++++VW+ C+ +
Sbjct: 147 NTLTALTASNNTVTTSSLSGNKD--SIYSLAMNQMGTVIVSGSTEKVLRVWDPRTCQKLM 204
Query: 188 NHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTL-VHNDIITAL 240
GHT + + ++ DG+ C SG D LW L + + T VH++ + AL
Sbjct: 205 KLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWAL 258
Score = 152 (58.6 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 48/182 (26%), Positives = 78/182 (42%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWK---LTR-DDTNYGVPQKRLKGHSHF 66
TL H +V +A K + + S D + +W LT +N V L G+
Sbjct: 112 TLRTHKDYVKALAY-AKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDS 170
Query: 67 ISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSR 126
I + ++ G +SGS +K LR+WD + + + HT +V ++ + D Q +S S
Sbjct: 171 IYSLAMNQMGTVIVSGSTEKVLRVWDPRTCQKLMKLKGHTDNVKALLLNRDGTQCLSGSS 230
Query: 127 DKTIKLWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKL 185
D TI+LW+ C T W V H + S G DR + +L N +
Sbjct: 231 DGTIRLWSLGQQRCIATYRVHDEGVWALQVNEGFTH----VYSGGRDRKIYCTDLRNPDI 286
Query: 186 KI 187
++
Sbjct: 287 RL 288
Score = 51 (23.0 bits), Expect = 8.0e-17, Sum P(2) = 8.0e-17
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 293 DNRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELR 332
D R I++ + + W+ L CK + DL EE++
Sbjct: 371 DKRHILTKDTNNNVAYWDVLKACK--VEDLGKVDFEEEIK 408
>UNIPROTKB|Q9BQ87 [details] [associations]
symbol:TBL1Y "F-box-like/WD repeat-containing protein
TBL1Y" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 InterPro:IPR013720
Pfam:PF08513 KO:K04508 HOGENOM:HOG000220902 HOVERGEN:HBG050240
OrthoDB:EOG412M5M EMBL:AF332220 EMBL:AF332221 EMBL:AF332222
EMBL:CH471163 EMBL:BC130471 EMBL:BC130473 IPI:IPI00020873
RefSeq:NP_150600.1 RefSeq:NP_599020.1 RefSeq:NP_599021.1
UniGene:Hs.664560 ProteinModelPortal:Q9BQ87 SMR:Q9BQ87
STRING:Q9BQ87 PhosphoSite:Q9BQ87 DMDM:23396873 PaxDb:Q9BQ87
PRIDE:Q9BQ87 Ensembl:ENST00000346432 Ensembl:ENST00000355162
Ensembl:ENST00000383032 GeneID:90665 KEGG:hsa:90665 UCSC:uc004frb.3
CTD:90665 GeneCards:GC0YP006778 HGNC:HGNC:18502 MIM:400033
neXtProt:NX_Q9BQ87 PharmGKB:PA38564 InParanoid:Q9BQ87 OMA:VHSYQGT
PhylomeDB:Q9BQ87 GenomeRNAi:90665 NextBio:76909 ArrayExpress:Q9BQ87
Bgee:Q9BQ87 CleanEx:HS_TBL1Y Genevestigator:Q9BQ87
GermOnline:ENSG00000092377 Uniprot:Q9BQ87
Length = 522
Score = 222 (83.2 bits), Expect = 8.3e-17, Sum P(2) = 8.3e-17
Identities = 83/316 (26%), Positives = 129/316 (40%)
Query: 12 LNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLK------GH-- 63
L GH V A NP D + S S D+T IW L +++N G Q L+ GH
Sbjct: 175 LRGHESEVFICAWNP-VSDLLASGSGDSTARIWNLN-ENSNGGSTQLVLRHCIREGGHDV 232
Query: 64 --SHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 121
+ ++ + +SDG GS+D R+W G H + ++ ++ +
Sbjct: 233 PSNKDVTSLDWNSDGTLLAMGSYDGFARIWT-ENGNLASTLGQHKGPIFALKWNKKGNYV 291
Query: 122 VSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPI-IVSAGWDRMVKVWNL 180
+S+ DKT +W+ AH T + S + QN + S D + V L
Sbjct: 292 LSAGVDKTTIIWD--AH---TGEAKQQFPFHSAPALDVDWQNNMTFASCSTDMCIHVCRL 346
Query: 181 TNCKLKIN-HSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTL-VHNDIIT 238
C + GHT +N + P G L AS DM +W + +H L H+ I
Sbjct: 347 -GCDHPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIY 405
Query: 239 ALCFSPN---RSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNR 295
+ +SP S + ++ S + L+ + G V SVAFS D +
Sbjct: 406 TIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVEQGVCTHTLMKHQEPVYSVAFSPDGK 465
Query: 296 QIVSSSRDKTIKLWNT 311
+ S S DK + +WNT
Sbjct: 466 YLASGSFDKYVHIWNT 481
Score = 198 (74.8 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 63/249 (25%), Positives = 108/249 (43%)
Query: 3 TETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKG 62
TE L TL H G + + N K + +LS D T IIW D + G +++
Sbjct: 263 TENGNLASTLGQHKGPIFALKWNKK-GNYVLSAGVDKTTIIW-----DAHTGEAKQQFPF 316
Query: 63 HSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 122
HS D+ ++ +A S S D + + L + F+ HT +V ++ + +
Sbjct: 317 HSAPALDVDWQNNMTFA-SCSTDMCIHVCRLGCDHPVKTFQGHTNEVNAIKWDPSGMLLA 375
Query: 123 SSSRDKTIKLWNTLAH-CKFTIVEDGHSDWVSCVRFSPNH---QNP----IIVSAGWDRM 174
S S D T+K+W+ C + HS + +++SP NP ++ SA +D
Sbjct: 376 SCSDDMTLKIWSMKQDACVHDL--QAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDST 433
Query: 175 VKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHN 234
V++W++ H + +V SPDG ASG D +W+ G +H+
Sbjct: 434 VRLWDVEQGVCTHTLMKHQEPVYSVAFSPDGKYLASGSFDKYVHIWNTQSGSLVHSYQGT 493
Query: 235 DIITALCFS 243
I +C++
Sbjct: 494 GGIFEVCWN 502
Score = 50 (22.7 bits), Expect = 8.3e-17, Sum P(2) = 8.3e-17
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 349 SLAWSTDGQTLFAGYSDNTIRVW 371
S+A+S DG+ L +G D + +W
Sbjct: 457 SVAFSPDGKYLASGSFDKYVHIW 479
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 233 (87.1 bits), Expect = 8.4e-17, P = 8.4e-17
Identities = 64/230 (27%), Positives = 103/230 (44%)
Query: 36 SRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAA 95
+ D + +W +T + GH I + + DG SGS D+T+RLWD+
Sbjct: 365 AEDKQIRVWDITTRTIRI-----QFAGHEQDIYSLDFARDGRTIASGSGDRTVRLWDIEN 419
Query: 96 GKTTRRF--EDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVE--DGHSDW 151
G F ED V +VA S D + + + S DK++++W+ C +E DGH D
Sbjct: 420 GTALTVFTIED---GVTTVAISPDTKYVAAGSLDKSVRVWDLTQGCPVERLEGPDGHKDS 476
Query: 152 VSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSG------------HTGYLNTV 199
V V FSPN ++ +V+ D+ +K+W L + + + G H ++ +V
Sbjct: 477 VYSVAFSPNGRD--LVTGSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFEGHRDFVLSV 534
Query: 200 TVSPDGSLCASGGKDMNAMLWDLNDGK-HLHTLVHNDIITALCFSPNRSF 248
++PD SG KD WD G L H + + ++ SP F
Sbjct: 535 ALTPDNQWVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSVISVAPSPTGGF 584
Score = 225 (84.3 bits), Expect = 7.2e-16, P = 7.2e-16
Identities = 60/165 (36%), Positives = 90/165 (54%)
Query: 66 FISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSS 124
+I + S DG Y +G+ DK +R+WD+ +T R +F H +D+ S+ F+ D R I S
Sbjct: 348 YIRSVCFSPDGKYLATGAEDKQIRVWDITT-RTIRIQFAGHEQDIYSLDFARDGRTIASG 406
Query: 125 SRDKTIKLW---NTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAG-WDRMVKVWNL 180
S D+T++LW N A FTI EDG V+ V SP+ + V+AG D+ V+VW+L
Sbjct: 407 SGDRTVRLWDIENGTALTVFTI-EDG----VTTVAISPDTK---YVAAGSLDKSVRVWDL 458
Query: 181 TN-CKLKI--NHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
T C ++ GH + +V SP+G +G D LW+L
Sbjct: 459 TQGCPVERLEGPDGHKDSVYSVAFSPNGRDLVTGSLDKTIKLWEL 503
Score = 225 (84.3 bits), Expect = 7.2e-16, P = 7.2e-16
Identities = 66/206 (32%), Positives = 99/206 (48%)
Query: 31 TILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRL 90
TI S S D T+ +W + + + ++ ++ + +S D Y +GS DK++R+
Sbjct: 402 TIASGSGDRTVRLWDI---ENGTALTVFTIEDG---VTTVAISPDTKYVAAGSLDKSVRV 455
Query: 91 WDLAAGKTTRRFE--DHTKD-VLSVAFSVDNRQIVSSSRDKTIKLWNTLA---------- 137
WDL G R E D KD V SVAFS + R +V+ S DKTIKLW
Sbjct: 456 WDLTQGCPVERLEGPDGHKDSVYSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGS 515
Query: 138 ---HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTG 194
C T +GH D+V V +P++Q ++S DR V+ W+ ++ GH
Sbjct: 516 KGGRCVKTF--EGHRDFVLSVALTPDNQ--WVMSGSKDRGVQFWDPRTGSTQLMLQGHKN 571
Query: 195 YLNTVTVSPDGSLCASGGKDMNAMLW 220
+ +V SP G A+G DM A +W
Sbjct: 572 SVISVAPSPTGGFFATGSGDMRARIW 597
Score = 213 (80.0 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 67/274 (24%), Positives = 132/274 (48%)
Query: 105 HTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSD-----WVSCVRFSP 159
H V V FS D + + + +++ ++++ K +++D ++D ++ V FSP
Sbjct: 298 HESVVCCVRFSADGKYVATGC-NRSAQIFDVNTGEKVCVLQDDNADTTGDLYIRSVCFSP 356
Query: 160 NHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAML 219
+ + + + D+ ++VW++T ++I +GH + ++ + DG ASG D L
Sbjct: 357 DGK--YLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIASGSGDRTVRL 414
Query: 220 WDLNDGKHLHTLVHNDIITALCFSPNRSFQKIKLDISRTLQKSNLIL-YPINHGKMETPF 278
WD+ +G L D +T + SP+ + + ++++ +L P+ ++E P
Sbjct: 415 WDIENGTALTVFTIEDGVTTVAISPDTKYVAAG-SLDKSVRVWDLTQGCPVE--RLEGP- 470
Query: 279 FSLFRD-VLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVS 337
+D V SVAFS + R +V+ S DKTIKLW LA + + + +K
Sbjct: 471 -DGHKDSVYSVAFSPNGRDLVTGSLDKTIKLWE-LATPRGNMQNQGSKG-------GRCV 521
Query: 338 QSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVW 371
++ + LS+A + D Q + +G D ++ W
Sbjct: 522 KTFEGHRDFVLSVALTPDNQWVMSGSKDRGVQFW 555
Score = 146 (56.5 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 38/135 (28%), Positives = 61/135 (45%)
Query: 7 QLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNY-------GVPQKR 59
+L G +GH V +A +P D + S D T+ +W+L N G K
Sbjct: 466 RLEGP-DGHKDSVYSVAFSPNGRDLVTG-SLDKTIKLWELATPRGNMQNQGSKGGRCVKT 523
Query: 60 LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 119
+GH F+ + L+ D + +SGS D+ ++ WD G T + H V+SVA S
Sbjct: 524 FEGHRDFVLSVALTPDNQWVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSVISVAPSPTGG 583
Query: 120 QIVSSSRDKTIKLWN 134
+ S D ++W+
Sbjct: 584 FFATGSGDMRARIWS 598
>ASPGD|ASPL0000005121 [details] [associations]
symbol:nudF species:162425 "Emericella nidulans"
[GO:0007097 "nuclear migration" evidence=IMP] [GO:0008017
"microtubule binding" evidence=IDA] [GO:0005816 "spindle pole body"
evidence=IDA] [GO:0048315 "conidium formation" evidence=IMP]
[GO:0043935 "sexual sporulation resulting in formation of a
cellular spore" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005881 "cytoplasmic microtubule" evidence=IEA] [GO:0051010
"microtubule plus-end binding" evidence=IEA] [GO:2000574
"regulation of microtubule motor activity" evidence=IMP]
[GO:0030473 "nuclear migration along microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005737
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301 GO:GO:0000922
GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 230 (86.0 bits), Expect = 8.4e-17, P = 8.4e-17
Identities = 67/249 (26%), Positives = 119/249 (47%)
Query: 7 QLRGTLNGHNGWVTQIATNPKFPDTIL-SCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSH 65
++ TL GH V+ + + +T+L SCS D T+ +W ++D N + L GH H
Sbjct: 147 EIERTLKGHIRGVSGLDYGGQKGNTLLASCSSDLTIKLWDPSKDYANI----RTLSGHDH 202
Query: 66 FISDI-VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKD-VLSVAFSVDNRQIVS 123
+S + L+S+ N+ +S S D TLR+WD++ G + + T+ + V+ S D + +VS
Sbjct: 203 SVSSVRFLTSNDNHLISASRDGTLRIWDVSTGFCVKVIKSATESWIRDVSPSFDGKWLVS 262
Query: 124 SSRDKTIKLWN-TLAHCKFTIVEDGHSDWVSCVRFSP----NH-------QNP------- 164
RD+ I +W + A K ++ GH +++ C F+P H + P
Sbjct: 263 GGRDQAITVWEVSSAEPKAALL--GHENFIECCVFAPPASYEHLATLAGLKKPPPATSSC 320
Query: 165 -IIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLN 223
+ + D+ +K+W +K H GH ++ + P G S D WDL+
Sbjct: 321 EFVATGARDKTIKLWEARGRLIKTLH-GHDNWVRGLVFHPGGKYLFSVSDDKTIRCWDLS 379
Query: 224 -DGKHLHTL 231
+G+ + T+
Sbjct: 380 QEGRLVKTI 388
Score = 212 (79.7 bits), Expect = 6.2e-16, Sum P(2) = 6.2e-16
Identities = 58/200 (29%), Positives = 93/200 (46%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
TL H VT +A +P F ++ S S D T+ IW D G ++ LKGH +S +
Sbjct: 109 TLTSHRDAVTCVAFHPVFT-SLASGSEDCTIKIW-----DWELGEIERTLKGHIRGVSGL 162
Query: 71 VLSSD-GNYALSG-SWDKTLRLWDLAAGKTT-RRFEDHTKDVLSVAFSVDN-RQIVSSSR 126
GN L+ S D T++LWD + R H V SV F N ++S+SR
Sbjct: 163 DYGGQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASR 222
Query: 127 DKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLK 186
D T+++W+ +++ W+ V SP+ +VS G D+ + VW +++ + K
Sbjct: 223 DGTLRIWDVSTGFCVKVIKSATESWIRDV--SPSFDGKWLVSGGRDQAITVWEVSSAEPK 280
Query: 187 INHSGHTGYLNTVTVSPDGS 206
GH ++ +P S
Sbjct: 281 AALLGHENFIECCVFAPPAS 300
Score = 202 (76.2 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 57/212 (26%), Positives = 99/212 (46%)
Query: 48 RDDTNYGVPQKR----LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFE 103
+D TN+ +P+ L H ++ + SGS D T+++WD G+ R +
Sbjct: 95 QDPTNW-LPKPSSTHTLTSHRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELGEIERTLK 153
Query: 104 DHTKDVLSVAFSVD--NRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNH 161
H + V + + N + S S D TIKLW+ GH VS VRF ++
Sbjct: 154 GHIRGVSGLDYGGQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSN 213
Query: 162 QNPIIVSAGWDRMVKVWNL-TNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLW 220
N +I SA D +++W++ T +K+ S ++ V+ S DG SGG+D +W
Sbjct: 214 DNHLI-SASRDGTLRIWDVSTGFCVKVIKSATESWIRDVSPSFDGKWLVSGGRDQAITVW 272
Query: 221 DLNDGKHLHTLV-HNDIITALCFSPNRSFQKI 251
+++ + L+ H + I F+P S++ +
Sbjct: 273 EVSSAEPKAALLGHENFIECCVFAPPASYEHL 304
Score = 151 (58.2 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 56/236 (23%), Positives = 95/236 (40%)
Query: 91 WDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSD 150
W+L + T + L N + S S D TIKLW+ GH
Sbjct: 143 WELGEIERTLKGHIRGVSGLDYGGQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDH 202
Query: 151 WVSCVRFSPNHQNPIIVSAGWDRMVKVWNL-TNCKLKINHSGHTGYLNTVTVSPDGSLCA 209
VS VRF ++ N +I SA D +++W++ T +K+ S ++ V+ S DG
Sbjct: 203 SVSSVRFLTSNDNHLI-SASRDGTLRIWDVSTGFCVKVIKSATESWIRDVSPSFDGKWLV 261
Query: 210 SGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKI--------------KLD 254
SGG+D +W+++ + L+ H + I F+P S++ + +
Sbjct: 262 SGGRDQAITVWEVSSAEPKAALLGHENFIECCVFAPPASYEHLATLAGLKKPPPATSSCE 321
Query: 255 ISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWN 310
T + I G++ V + F + + S S DKTI+ W+
Sbjct: 322 FVATGARDKTIKLWEARGRLIKTLHGHDNWVRGLVFHPGGKYLFSVSDDKTIRCWD 377
Score = 131 (51.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 29/95 (30%), Positives = 48/95 (50%)
Query: 73 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKL 132
+S + +G+ DKT++LW+ A G+ + H V + F + + S S DKTI+
Sbjct: 317 TSSCEFVATGARDKTIKLWE-ARGRLIKTLHGHDNWVRGLVFHPGGKYLFSVSDDKTIRC 375
Query: 133 WNTLAHCKFT-IVEDGHSDWVSCVRF--SPNHQNP 164
W+ + + H +VSC+R+ SPN NP
Sbjct: 376 WDLSQEGRLVKTISGAHEHFVSCIRWAPSPNTDNP 410
Score = 113 (44.8 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 54/215 (25%), Positives = 93/215 (43%)
Query: 100 RRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSP 159
RR D +V S+ ++ S++R K N L T H D V+CV F P
Sbjct: 67 RRINDLEAEVRSLQAELEASP--SAARAKNQDPTNWLPKPSSTHTLTSHRDAVTCVAFHP 124
Query: 160 NHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPD--GSLCASGGKDMNA 217
+ + S D +K+W+ +++ GH ++ + +L AS D+
Sbjct: 125 VFTS--LASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQKGNTLLASCSSDLTI 182
Query: 218 MLWDLN-DGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLIL-YPINHGKM 274
LWD + D ++ TL H+ ++++ F + I TL+ ++ + + K
Sbjct: 183 KLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWDVSTGFCVKVIKS 242
Query: 275 ETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLW 309
T S RDV S +F D + +VS RD+ I +W
Sbjct: 243 ATE--SWIRDV-SPSF--DGKWLVSGGRDQAITVW 272
Score = 53 (23.7 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 353 STDGQTLFAGYSDNTIRVWQVS 374
S DG+ L +G D I VW+VS
Sbjct: 254 SFDGKWLVSGGRDQAITVWEVS 275
Score = 50 (22.7 bits), Expect = 6.2e-16, Sum P(2) = 6.2e-16
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 350 LAWSTDGQTLFAGYSDNTIRVWQVSVTSR 378
L + G+ LF+ D TIR W +S R
Sbjct: 355 LVFHPGGKYLFSVSDDKTIRCWDLSQEGR 383
>UNIPROTKB|Q00664 [details] [associations]
symbol:nudF "Nuclear distribution protein nudF"
species:227321 "Aspergillus nidulans FGSC A4" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
GO:GO:0000922 GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 230 (86.0 bits), Expect = 8.4e-17, P = 8.4e-17
Identities = 67/249 (26%), Positives = 119/249 (47%)
Query: 7 QLRGTLNGHNGWVTQIATNPKFPDTIL-SCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSH 65
++ TL GH V+ + + +T+L SCS D T+ +W ++D N + L GH H
Sbjct: 147 EIERTLKGHIRGVSGLDYGGQKGNTLLASCSSDLTIKLWDPSKDYANI----RTLSGHDH 202
Query: 66 FISDI-VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKD-VLSVAFSVDNRQIVS 123
+S + L+S+ N+ +S S D TLR+WD++ G + + T+ + V+ S D + +VS
Sbjct: 203 SVSSVRFLTSNDNHLISASRDGTLRIWDVSTGFCVKVIKSATESWIRDVSPSFDGKWLVS 262
Query: 124 SSRDKTIKLWN-TLAHCKFTIVEDGHSDWVSCVRFSP----NH-------QNP------- 164
RD+ I +W + A K ++ GH +++ C F+P H + P
Sbjct: 263 GGRDQAITVWEVSSAEPKAALL--GHENFIECCVFAPPASYEHLATLAGLKKPPPATSSC 320
Query: 165 -IIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLN 223
+ + D+ +K+W +K H GH ++ + P G S D WDL+
Sbjct: 321 EFVATGARDKTIKLWEARGRLIKTLH-GHDNWVRGLVFHPGGKYLFSVSDDKTIRCWDLS 379
Query: 224 -DGKHLHTL 231
+G+ + T+
Sbjct: 380 QEGRLVKTI 388
Score = 212 (79.7 bits), Expect = 6.2e-16, Sum P(2) = 6.2e-16
Identities = 58/200 (29%), Positives = 93/200 (46%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
TL H VT +A +P F ++ S S D T+ IW D G ++ LKGH +S +
Sbjct: 109 TLTSHRDAVTCVAFHPVFT-SLASGSEDCTIKIW-----DWELGEIERTLKGHIRGVSGL 162
Query: 71 VLSSD-GNYALSG-SWDKTLRLWDLAAGKTT-RRFEDHTKDVLSVAFSVDN-RQIVSSSR 126
GN L+ S D T++LWD + R H V SV F N ++S+SR
Sbjct: 163 DYGGQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASR 222
Query: 127 DKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLK 186
D T+++W+ +++ W+ V SP+ +VS G D+ + VW +++ + K
Sbjct: 223 DGTLRIWDVSTGFCVKVIKSATESWIRDV--SPSFDGKWLVSGGRDQAITVWEVSSAEPK 280
Query: 187 INHSGHTGYLNTVTVSPDGS 206
GH ++ +P S
Sbjct: 281 AALLGHENFIECCVFAPPAS 300
Score = 202 (76.2 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 57/212 (26%), Positives = 99/212 (46%)
Query: 48 RDDTNYGVPQKR----LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFE 103
+D TN+ +P+ L H ++ + SGS D T+++WD G+ R +
Sbjct: 95 QDPTNW-LPKPSSTHTLTSHRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELGEIERTLK 153
Query: 104 DHTKDVLSVAFSVD--NRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNH 161
H + V + + N + S S D TIKLW+ GH VS VRF ++
Sbjct: 154 GHIRGVSGLDYGGQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSN 213
Query: 162 QNPIIVSAGWDRMVKVWNL-TNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLW 220
N +I SA D +++W++ T +K+ S ++ V+ S DG SGG+D +W
Sbjct: 214 DNHLI-SASRDGTLRIWDVSTGFCVKVIKSATESWIRDVSPSFDGKWLVSGGRDQAITVW 272
Query: 221 DLNDGKHLHTLV-HNDIITALCFSPNRSFQKI 251
+++ + L+ H + I F+P S++ +
Sbjct: 273 EVSSAEPKAALLGHENFIECCVFAPPASYEHL 304
Score = 151 (58.2 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 56/236 (23%), Positives = 95/236 (40%)
Query: 91 WDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSD 150
W+L + T + L N + S S D TIKLW+ GH
Sbjct: 143 WELGEIERTLKGHIRGVSGLDYGGQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDH 202
Query: 151 WVSCVRFSPNHQNPIIVSAGWDRMVKVWNL-TNCKLKINHSGHTGYLNTVTVSPDGSLCA 209
VS VRF ++ N +I SA D +++W++ T +K+ S ++ V+ S DG
Sbjct: 203 SVSSVRFLTSNDNHLI-SASRDGTLRIWDVSTGFCVKVIKSATESWIRDVSPSFDGKWLV 261
Query: 210 SGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKI--------------KLD 254
SGG+D +W+++ + L+ H + I F+P S++ + +
Sbjct: 262 SGGRDQAITVWEVSSAEPKAALLGHENFIECCVFAPPASYEHLATLAGLKKPPPATSSCE 321
Query: 255 ISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWN 310
T + I G++ V + F + + S S DKTI+ W+
Sbjct: 322 FVATGARDKTIKLWEARGRLIKTLHGHDNWVRGLVFHPGGKYLFSVSDDKTIRCWD 377
Score = 131 (51.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 29/95 (30%), Positives = 48/95 (50%)
Query: 73 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKL 132
+S + +G+ DKT++LW+ A G+ + H V + F + + S S DKTI+
Sbjct: 317 TSSCEFVATGARDKTIKLWE-ARGRLIKTLHGHDNWVRGLVFHPGGKYLFSVSDDKTIRC 375
Query: 133 WNTLAHCKFT-IVEDGHSDWVSCVRF--SPNHQNP 164
W+ + + H +VSC+R+ SPN NP
Sbjct: 376 WDLSQEGRLVKTISGAHEHFVSCIRWAPSPNTDNP 410
Score = 113 (44.8 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 54/215 (25%), Positives = 93/215 (43%)
Query: 100 RRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSP 159
RR D +V S+ ++ S++R K N L T H D V+CV F P
Sbjct: 67 RRINDLEAEVRSLQAELEASP--SAARAKNQDPTNWLPKPSSTHTLTSHRDAVTCVAFHP 124
Query: 160 NHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPD--GSLCASGGKDMNA 217
+ + S D +K+W+ +++ GH ++ + +L AS D+
Sbjct: 125 VFTS--LASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQKGNTLLASCSSDLTI 182
Query: 218 MLWDLN-DGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLIL-YPINHGKM 274
LWD + D ++ TL H+ ++++ F + I TL+ ++ + + K
Sbjct: 183 KLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWDVSTGFCVKVIKS 242
Query: 275 ETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLW 309
T S RDV S +F D + +VS RD+ I +W
Sbjct: 243 ATE--SWIRDV-SPSF--DGKWLVSGGRDQAITVW 272
Score = 53 (23.7 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 353 STDGQTLFAGYSDNTIRVWQVS 374
S DG+ L +G D I VW+VS
Sbjct: 254 SFDGKWLVSGGRDQAITVWEVS 275
Score = 50 (22.7 bits), Expect = 6.2e-16, Sum P(2) = 6.2e-16
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 350 LAWSTDGQTLFAGYSDNTIRVWQVSVTSR 378
L + G+ LF+ D TIR W +S R
Sbjct: 355 LVFHPGGKYLFSVSDDKTIRCWDLSQEGR 383
>MGI|MGI:1858197 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1, PRL1 homolog
(Arabidopsis)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1858197 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB EMBL:AF044334 EMBL:AK075993 EMBL:AK076007
EMBL:AK077197 EMBL:BC006750 EMBL:BC052895 IPI:IPI00331172
RefSeq:NP_058064.2 UniGene:Mm.286349 ProteinModelPortal:Q922V4
SMR:Q922V4 STRING:Q922V4 PhosphoSite:Q922V4 PaxDb:Q922V4
PRIDE:Q922V4 Ensembl:ENSMUST00000150268 GeneID:53317 KEGG:mmu:53317
UCSC:uc008ppi.1 InParanoid:Q922V4 NextBio:310109 Bgee:Q922V4
Genevestigator:Q922V4 GermOnline:ENSMUSG00000027998 Uniprot:Q922V4
Length = 513
Score = 231 (86.4 bits), Expect = 9.7e-17, P = 9.7e-17
Identities = 74/306 (24%), Positives = 129/306 (42%)
Query: 7 QLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHF 66
+L ++GH GWV IA P ++ S D T+ IW L G + L GH
Sbjct: 194 KLYRVISGHLGWVRCIAVEPG-NQWFVTGSADRTIKIWDLAS-----GKLKLSLTGHIST 247
Query: 67 ISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSR 126
+ +++S+ Y S DK ++ WDL K R + H V + +V+ SR
Sbjct: 248 VRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTLDVLVTCSR 307
Query: 127 DKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLK 186
D T ++W+ + GH++ V+ VR P I++ D +++W+L K +
Sbjct: 308 DSTARIWDVRTKASVHTLS-GHTNAVATVRCQA--AEPQIITGSHDTTIRLWDLVAGKTR 364
Query: 187 INHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPN 245
+ + H + V + P ASG D N W DG + L HN II L + +
Sbjct: 365 VTLTNHKKSVRAVVLHPLLYTFASGSPD-NIKQWKFPDGGFIQNLSGHNAIINTLAVNAD 423
Query: 246 RSFQKIKLDISRTLQ--KSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRD 303
+ + L ++ + H ++ + + AF +++++ D
Sbjct: 424 GVLVSGADNGTMHLWDWRTGYNFQRV-HAAVQPGSLDSESGIFACAFDRSESRLLTAEAD 482
Query: 304 KTIKLW 309
KTIK++
Sbjct: 483 KTIKVY 488
Score = 160 (61.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 49/172 (28%), Positives = 74/172 (43%)
Query: 144 VEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSP 203
V GH WV C+ P +Q + SA DR +K+W+L + KLK++ +GH + V VS
Sbjct: 198 VISGHLGWVRCIAVEPGNQWFVTGSA--DRTIKIWDLASGKLKLSLTGHISTVRGVIVST 255
Query: 204 DGSLCASGGKDMNAMLWDLNDGKHL-HTLVHNDIITALCFSPNRSFQKIKLDISRTLQK- 261
S G+D WDL K + H H + L P LD+ T +
Sbjct: 256 RSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPT-------LDVLVTCSRD 308
Query: 262 SNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA 313
S ++ + V +V QI++ S D TI+LW+ +A
Sbjct: 309 STARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVA 360
>WB|WBGene00001679 [details] [associations]
symbol:gpb-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0035046 "pronuclear migration"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0040013 "negative
regulation of locomotion" evidence=IMP] [GO:0046662 "regulation of
oviposition" evidence=IMP] [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0009792 GO:GO:0000132
GO:GO:0035046 GO:GO:0018991 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0040013 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0004871
GO:GO:0046662 PRINTS:PR00319 GO:GO:0005834
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 OMA:CMLWDIE
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:X17497 EMBL:AF291846
EMBL:Z49127 PIR:S09591 PIR:T20830 RefSeq:NP_001254312.1
UniGene:Cel.6600 ProteinModelPortal:P17343 SMR:P17343 STRING:P17343
PaxDb:P17343 PRIDE:P17343 EnsemblMetazoa:F13D12.7a.1
EnsemblMetazoa:F13D12.7a.2 EnsemblMetazoa:F13D12.7a.3 GeneID:174803
KEGG:cel:CELE_F13D12.7 UCSC:F13D12.7.1 CTD:174803
WormBase:F13D12.7a InParanoid:P17343 KO:K07972 NextBio:885576
ArrayExpress:P17343 Uniprot:P17343
Length = 340
Score = 197 (74.4 bits), Expect = 9.7e-17, Sum P(2) = 9.7e-17
Identities = 66/250 (26%), Positives = 113/250 (45%)
Query: 6 LQLRGTLNGHNGWVTQI--ATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGH 63
++ R TL GH + + A++ + ++S S+D LI+W + + +P +
Sbjct: 45 MRTRRTLRGHLAKIYAMHWASDSR---NLVSASQDGKLIVWDSYTTNKVHAIPLR----- 96
Query: 64 SHFISDIVLSSDGNYALSGSWDKTLRLWDLAA--G--KTTRRFEDHTKDVLSVAFSVDNR 119
S ++ + G++ G D ++ L G + +R HT LS +D+
Sbjct: 97 SSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHT-GYLSCCRFLDDN 155
Query: 120 QIVSSSRDKTIKLWN--TLAHCK-FTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVK 176
QIV+SS D T LW+ T C FT GH+ V + SP+ + +S D K
Sbjct: 156 QIVTSSGDMTCALWDIETGQQCTAFT----GHTGDVMSLSLSPDFRT--FISGACDASAK 209
Query: 177 VWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDI 236
+W++ + K GH +N V P G+ A+G D L+D+ + L H++I
Sbjct: 210 LWDIRDGMCKQTFPGHESDINAVAFFPSGNAFATGSDDATCRLFDIRADQELAMYSHDNI 269
Query: 237 I---TALCFS 243
I T++ FS
Sbjct: 270 ICGITSVAFS 279
Score = 193 (73.0 bits), Expect = 4.3e-13, Sum P(2) = 4.3e-13
Identities = 59/210 (28%), Positives = 97/210 (46%)
Query: 16 NGWVTQIATNPKFPDTILSCSR-DNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSS 74
+ WV A P + ++C DN I+ L + N V + L GH+ ++S
Sbjct: 97 SSWVMTCAYAPS--GSFVACGGLDNICSIYSLKTREGNVRV-SRELPGHTGYLSCCRFLD 153
Query: 75 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 134
D N ++ S D T LWD+ G+ F HT DV+S++ S D R +S + D + KLW+
Sbjct: 154 D-NQIVTSSGDMTCALWDIETGQQCTAFTGHTGDVMSLSLSPDFRTFISGACDASAKLWD 212
Query: 135 TL-AHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL-TNCKLKI-NHSG 191
CK T GH ++ V F P+ N + D +++++ + +L + +H
Sbjct: 213 IRDGMCKQTF--PGHESDINAVAFFPSG-NAFATGSD-DATCRLFDIRADQELAMYSHDN 268
Query: 192 HTGYLNTVTVSPDGSLCASGGKDMNAMLWD 221
+ +V S G L +G D N +WD
Sbjct: 269 IICGITSVAFSKSGRLLFAGYDDFNCNVWD 298
Score = 181 (68.8 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 63/263 (23%), Positives = 115/263 (43%)
Query: 57 QKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 116
++ L+GH I + +SD +S S D L +WD + V++ A++
Sbjct: 48 RRTLRGHLAKIYAMHWASDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAP 107
Query: 117 DNRQIVSSSRDKTIKLWNTLA---HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDR 173
+ D +++ + + + GH+ ++SC RF ++Q I+ S+G D
Sbjct: 108 SGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQ--IVTSSG-DM 164
Query: 174 MVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV- 232
+W++ + +GHTG + ++++SPD SG D +A LWD+ DG T
Sbjct: 165 TCALWDIETGQQCTAFTGHTGDVMSLSLSPDFRTFISGACDASAKLWDIRDGMCKQTFPG 224
Query: 233 HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFS---LFRDVLSVA 289
H I A+ F P+ + D T + L+ I E +S + + SVA
Sbjct: 225 HESDINAVAFFPSGNAFATGSD-DATCR-----LFDIR-ADQELAMYSHDNIICGITSVA 277
Query: 290 FSVDNRQIVSSSRDKTIKLWNTL 312
FS R + + D +W+++
Sbjct: 278 FSKSGRLLFAGYDDFNCNVWDSM 300
Score = 176 (67.0 bits), Expect = 4.5e-14, Sum P(2) = 4.5e-14
Identities = 55/223 (24%), Positives = 96/223 (43%)
Query: 97 KTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVR 156
+T R H + ++ ++ D+R +VS+S+D + +W++ K + S WV
Sbjct: 46 RTRRTLRGHLAKIYAMHWASDSRNLVSASQDGKLIVWDSYTTNKVHAIPL-RSSWVMTCA 104
Query: 157 FSPNHQNPIIVSAGWDRMVKVWNLT----NCKLKINHSGHTGYLNTVTVSPDGSLCASGG 212
++P+ + G D + +++L N ++ GHTGYL+ D + S G
Sbjct: 105 YAPS--GSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSG 162
Query: 213 KDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPN-RSFQKIKLDISRTLQKSNLILYPIN 270
DM LWD+ G+ H + +L SP+ R+F D S L + I
Sbjct: 163 -DMTCALWDIETGQQCTAFTGHTGDVMSLSLSPDFRTFISGACDASAKL-------WDIR 214
Query: 271 HGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA 313
G + F D+ +VAF + S D T +L++ A
Sbjct: 215 DGMCKQTFPGHESDINAVAFFPSGNAFATGSDDATCRLFDIRA 257
Score = 166 (63.5 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 48/179 (26%), Positives = 84/179 (46%)
Query: 4 ETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGH 63
ET Q GH G V ++ +P F T +S + D + +W + RD G+ ++ GH
Sbjct: 172 ETGQQCTAFTGHTGDVMSLSLSPDFR-TFISGACDASAKLWDI-RD----GMCKQTFPGH 225
Query: 64 SHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK---DVLSVAFSVDNRQ 120
I+ + GN +GS D T RL+D+ A + + H + SVAFS R
Sbjct: 226 ESDINAVAFFPSGNAFATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSKSGRL 284
Query: 121 IVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
+ + D +W+++ + ++ GH + VSC+ + + + + WD +K+WN
Sbjct: 285 LFAGYDDFNCNVWDSMRQERAGVLA-GHDNRVSCLGVTEDGM--AVCTGSWDSFLKIWN 340
Score = 157 (60.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 53/214 (24%), Positives = 94/214 (43%)
Query: 12 LNGHNGWVTQIATNPKFPDT--ILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISD 69
L GH G+++ +F D I++ S D T +W D G GH+ +
Sbjct: 139 LPGHTGYLSCC----RFLDDNQIVTSSGDMTCALW-----DIETGQQCTAFTGHTGDVMS 189
Query: 70 IVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKT 129
+ LS D +SG+ D + +LWD+ G + F H D+ +VAF + S D T
Sbjct: 190 LSLSPDFRTFISGACDASAKLWDIRDGMCKQTFPGHESDINAVAFFPSGNAFATGSDDAT 249
Query: 130 IKLWNTLAHCKFTIVE-DGHSDWVSCVRFSPNHQNPIIVSAGWDRM-VKVWNLTNCKLKI 187
+L++ A + + D ++ V FS + + ++ AG+D VW+ +
Sbjct: 250 CRLFDIRADQELAMYSHDNIICGITSVAFSKSGR---LLFAGYDDFNCNVWDSMRQERAG 306
Query: 188 NHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWD 221
+GH ++ + V+ DG +G D +W+
Sbjct: 307 VLAGHDNRVSCLGVTEDGMAVCTGSWDSFLKIWN 340
Score = 68 (29.0 bits), Expect = 9.7e-17, Sum P(2) = 9.7e-17
Identities = 18/53 (33%), Positives = 24/53 (45%)
Query: 330 ELRPDVVSQSTKADPPMC--LSLAWSTDGQTLFAGYSDNTIRVWQVSVTSRGG 380
++R D D +C S+A+S G+ LFAGY D VW R G
Sbjct: 254 DIRADQELAMYSHDNIICGITSVAFSKSGRLLFAGYDDFNCNVWDSMRQERAG 306
Score = 38 (18.4 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 347 CLSLAWSTDGQTLFAGYSDNTIRVW 371
CL + + DG + G D+ +++W
Sbjct: 317 CLGV--TEDGMAVCTGSWDSFLKIW 339
>UNIPROTKB|E1BWK2 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031648 "protein destabilization"
evidence=IEA] [GO:0042347 "negative regulation of NF-kappaB import
into nucleus" evidence=IEA] [GO:0042753 "positive regulation of
circadian rhythm" evidence=IEA] [GO:0045862 "positive regulation of
proteolysis" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 GeneTree:ENSGT00690000101849 OMA:FDQWSEA
EMBL:AADN02035964 EMBL:AADN02035965 EMBL:AADN02035966
IPI:IPI00818493 Ensembl:ENSGALT00000041199 ArrayExpress:E1BWK2
Uniprot:E1BWK2
Length = 523
Score = 231 (86.4 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 87/293 (29%), Positives = 134/293 (45%)
Query: 30 DTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTL- 88
+ I+S RDN++ IW D T+ K L GH+ + + L D ++GS D T+
Sbjct: 231 EKIISGLRDNSIKIW----DKTSLEC-LKVLTGHTGSV--LCLQYDERVIVTGSSDSTVS 283
Query: 89 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTI--VED 146
R+WD+ G+ H + VL + FS N +V+ S+D++I +W+ + T+ V
Sbjct: 284 RVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASPTDITLRRVLV 341
Query: 147 GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGS 206
GH V+ V F + IVSA DR +KVW+ + C+ +GH + +
Sbjct: 342 GHRAAVNVVDFDDKY----IVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--R 395
Query: 207 LCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQ-----KIKL-DISRTL 259
L SG D LWD+ G L L H +++ + F R KIK+ D+ L
Sbjct: 396 LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAAL 455
Query: 260 QKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTL 312
P + + T R V + F D QI+SSS D TI +W+ L
Sbjct: 456 DPRA----PASTLCLRTLVEHSGR-VFRLQF--DEFQIISSSHDDTILIWDFL 501
Score = 163 (62.4 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 59/193 (30%), Positives = 90/193 (46%)
Query: 1 MSTET-LQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKR 59
M++ T + LR L GH V + + K+ I+S S D T+ +W + + +
Sbjct: 328 MASPTDITLRRVLVGHRAAVNVVDFDDKY---IVSASGDRTIKVWSTSTCEF-----VRT 379
Query: 60 LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 119
L GH I+ L +SGS D T+RLWD+ G R E H + V + F DN+
Sbjct: 380 LNGHKRGIA--CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNK 435
Query: 120 QIVSSSRDKTIKLWNTLAH----------CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSA 169
+IVS + D IK+W+ A C T+VE HS V ++F Q I+S+
Sbjct: 436 RIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVE--HSGRVFRLQFD-EFQ---IISS 489
Query: 170 GWDRMVKVWNLTN 182
D + +W+ N
Sbjct: 490 SHDDTILIWDFLN 502
Score = 152 (58.6 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 64/248 (25%), Positives = 112/248 (45%)
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI- 130
L D +SG D ++++WD + + + HT VL + + D R IV+ S D T+
Sbjct: 226 LQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVS 283
Query: 131 KLWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL---TNCKLK 186
++W+ T++ H++ V +RFS N ++V+ DR + VW++ T+ L+
Sbjct: 284 RVWDVNTGEVLNTLIH--HNEAVLHLRFS----NGLMVTCSKDRSIAVWDMASPTDITLR 337
Query: 187 INHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPN 245
GH +N V + ASG D +W + + + TL H I L +
Sbjct: 338 RVLVGHRAAVNVVDFDDKYIVSASG--DRTIKVWSTSTCEFVRTLNGHKRGIACLQY--- 392
Query: 246 RSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKT 305
+ +L +S + + + L+ I G V + F DN++IVS + D
Sbjct: 393 ----RDRLVVSGS-SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGK 445
Query: 306 IKLWNTLA 313
IK+W+ A
Sbjct: 446 IKVWDLQA 453
Score = 37 (18.1 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 355 DGQTLFAGYSDNTIRVWQV 373
D + + +G D I+VW +
Sbjct: 433 DNKRIVSGAYDGKIKVWDL 451
>UNIPROTKB|Q5F3K4 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9031
"Gallus gallus" [GO:0005764 "lysosome" evidence=IEA] [GO:0016579
"protein deubiquitination" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005764 GO:GO:0016579
KO:K15361 InterPro:IPR021772 Pfam:PF11816 CTD:57599
HOGENOM:HOG000007343 OrthoDB:EOG4HHP1W EMBL:AJ851646
IPI:IPI00571490 RefSeq:NP_001026135.1 UniGene:Gga.3234
ProteinModelPortal:Q5F3K4 STRING:Q5F3K4 Ensembl:ENSGALT00000031283
GeneID:420427 KEGG:gga:420427 GeneTree:ENSGT00520000055738
HOVERGEN:HBG079413 InParanoid:Q5F3K4 OMA:NRLYSAG NextBio:20823337
Uniprot:Q5F3K4
Length = 678
Score = 224 (83.9 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 62/245 (25%), Positives = 115/245 (46%)
Query: 16 NGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSD 75
NG V + +P + + + RD+ + IW + + + + ++ H+ +++DIVL +
Sbjct: 31 NG-VNALQLDPAL-NRLFTAGRDSIIRIWSVNQHKQDPYIAS--MEHHTDWVNDIVLCCN 86
Query: 76 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLW-- 133
G +S S D T+++W+ G H V ++A++ D + S+ D+ I LW
Sbjct: 87 GKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDV 146
Query: 134 NTLAHCKF---TIVED---GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKI 187
NTL T+ G+ D S + N +IVS +++++VW+ C +
Sbjct: 147 NTLTALTASNNTVTTSSLSGNKD--SIYSLAMNQMGTVIVSGSTEKVLRVWDPRTCAKLM 204
Query: 188 NHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTL-VHNDIITALCFSPNR 246
GHT + + ++ DG+ C SG D LW L + + T VH++ + AL N
Sbjct: 205 KLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWAL--QVNE 262
Query: 247 SFQKI 251
+F +
Sbjct: 263 AFTHV 267
Score = 152 (58.6 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 48/182 (26%), Positives = 78/182 (42%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWK---LTR-DDTNYGVPQKRLKGHSHF 66
TL H +V +A K + + S D + +W LT +N V L G+
Sbjct: 112 TLRTHKDYVKALAY-AKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDS 170
Query: 67 ISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSR 126
I + ++ G +SGS +K LR+WD + + HT +V ++ + D Q +S S
Sbjct: 171 IYSLAMNQMGTVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSS 230
Query: 127 DKTIKLWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKL 185
D TI+LW+ C T W V + H + S G DR + +L N +
Sbjct: 231 DGTIRLWSLGQQRCIATYRVHDEGVWALQVNEAFTH----VYSGGRDRKIYCTDLRNPDI 286
Query: 186 KI 187
++
Sbjct: 287 RV 288
Score = 144 (55.7 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 51/225 (22%), Positives = 92/225 (40%)
Query: 11 TLNGHNGWVTQIAT--NPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFIS 68
++ H WV I N K T++S S D T+ +W + + G L+ H ++
Sbjct: 70 SMEHHTDWVNDIVLCCNGK---TLISASSDTTVKVW-----NAHKGFCMSTLRTHKDYVK 121
Query: 69 DIVLSSDGNYALSGSWDKTLRLWD------LAAGK---TTRRFEDHTKDVLSVAFSVDNR 119
+ + D S D+ + LWD L A TT + + S+A +
Sbjct: 122 ALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMGT 181
Query: 120 QIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
IVS S +K +++W+ K ++ GH+D V + N +S D +++W+
Sbjct: 182 VIVSGSTEKVLRVWDPRTCAKLMKLK-GHTDNVKALLL--NRDGTQCLSGSSDGTIRLWS 238
Query: 180 LTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLND 224
L + + H + + V+ + SGG+D DL +
Sbjct: 239 LGQQRCIATYRVHDEGVWALQVNEAFTHVYSGGRDRKIYCTDLRN 283
Score = 51 (23.0 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 293 DNRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELR 332
D R I++ + + W+ L CK + DL EE++
Sbjct: 371 DKRHILTKDTNNNVAYWDVLKACK--VEDLGKVDFEEEIK 408
>UNIPROTKB|G4MKJ2 [details] [associations]
symbol:MGG_04473 "WD repeat containing protein 5"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0043581 "mycelium development" evidence=IEP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
GO:GO:0043581 KO:K14963 RefSeq:XP_003710987.1
EnsemblFungi:MGG_04473T0 GeneID:2677800 KEGG:mgr:MGG_04473
Uniprot:G4MKJ2
Length = 594
Score = 183 (69.5 bits), Expect = 5.1e-11, Sum P(2) = 5.1e-11
Identities = 45/144 (31%), Positives = 76/144 (52%)
Query: 57 QKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 116
++ L GH +++ + S GN SGS+D+ + LWD+ AG+ R H+ V + F
Sbjct: 299 RRPLLGHHNYVYCLAFSPKGNILASGSYDEAVFLWDVRAGRLMRSLPAHSDPVSGIDFCR 358
Query: 117 DNRQIVSSSRDKTIKLWNTLA-HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMV 175
D +VS S D I++W+T C T+V + + V+ V FSPN + I++ D +
Sbjct: 359 DGTLVVSCSTDGLIRIWDTATGQCLRTLVHEDNPA-VTNVCFSPNGR--YILAFNLDSCI 415
Query: 176 KVWNLTN--CKLKINHSGH--TGY 195
++W+ K+K + GH TG+
Sbjct: 416 RLWDYIAHPSKVKKTYQGHVNTGF 439
Score = 164 (62.8 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 49/146 (33%), Positives = 72/146 (49%)
Query: 9 RGT---LNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSH 65
RGT L GH+ +V +A +PK + + S S D + +W D G + L HS
Sbjct: 296 RGTRRPLLGHHNYVYCLAFSPK-GNILASGSYDEAVFLW-----DVRAGRLMRSLPAHSD 349
Query: 66 FISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF--EDHTKDVLSVAFSVDNRQIVS 123
+S I DG +S S D +R+WD A G+ R ED+ V +V FS + R I++
Sbjct: 350 PVSGIDFCRDGTLVVSCSTDGLIRIWDTATGQCLRTLVHEDNPA-VTNVCFSPNGRYILA 408
Query: 124 SSRDKTIKLWNTLAH-CKFTIVEDGH 148
+ D I+LW+ +AH K GH
Sbjct: 409 FNLDSCIRLWDYIAHPSKVKKTYQGH 434
Score = 152 (58.6 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 37/111 (33%), Positives = 57/111 (51%)
Query: 147 GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGS 206
GH ++V C+ FSP + I+ S +D V +W++ +L + H+ ++ + DG+
Sbjct: 304 GHHNYVYCLAFSP--KGNILASGSYDEAVFLWDVRAGRLMRSLPAHSDPVSGIDFCRDGT 361
Query: 207 LCASGGKDMNAMLWDLNDGKHLHTLVHND--IITALCFSPN-RSFQKIKLD 254
L S D +WD G+ L TLVH D +T +CFSPN R LD
Sbjct: 362 LVVSCSTDGLIRIWDTATGQCLRTLVHEDNPAVTNVCFSPNGRYILAFNLD 412
Score = 130 (50.8 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 32/95 (33%), Positives = 48/95 (50%)
Query: 60 LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 119
L+GHS I+ + +S +G + S S D T R+WD G H V +A+S D+
Sbjct: 176 LRGHSQPIAQVRISPNGRWIASASADGTARIWDAETGAHIDTLVGHMAGVSCLAWSPDSG 235
Query: 120 QIVSSSRDKTIKLWNTL----AHCKFTIVEDGHSD 150
+ + S DK I+LW+ + AH T +DG D
Sbjct: 236 TLATGSDDKAIRLWDRITAEPAHAVGT--QDGDDD 268
Score = 117 (46.2 bits), Expect = 7.2e-13, Sum P(2) = 7.2e-13
Identities = 36/127 (28%), Positives = 63/127 (49%)
Query: 191 GHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTL-VHNDIITALCFSPNRSFQ 249
GH Y+ + SP G++ ASG D LWD+ G+ + +L H+D ++ + F + +
Sbjct: 304 GHHNYVYCLAFSPKGNILASGSYDEAVFLWDVRAGRLMRSLPAHSDPVSGIDFCRDGT-- 361
Query: 250 KIKLDISRTLQKSNLI-LYPINHGK-METPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIK 307
L +S LI ++ G+ + T V +V FS + R I++ + D I+
Sbjct: 362 ---LVVS--CSTDGLIRIWDTATGQCLRTLVHEDNPAVTNVCFSPNGRYILAFNLDSCIR 416
Query: 308 LWNTLAH 314
LW+ +AH
Sbjct: 417 LWDYIAH 423
Score = 101 (40.6 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 184 KLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCF 242
K ++ GH+ + V +SP+G AS D A +WD G H+ TLV H ++ L +
Sbjct: 171 KRRLELRGHSQPIAQVRISPNGRWIASASADGTARIWDAETGAHIDTLVGHMAGVSCLAW 230
Query: 243 SPN 245
SP+
Sbjct: 231 SPD 233
Score = 98 (39.6 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 28/81 (34%), Positives = 36/81 (44%)
Query: 12 LNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV 71
L GH+ + Q+ +P I S S D T IW D G L GH +S +
Sbjct: 176 LRGHSQPIAQVRISPN-GRWIASASADGTARIW-----DAETGAHIDTLVGHMAGVSCLA 229
Query: 72 LSSDGNYALSGSWDKTLRLWD 92
S D +GS DK +RLWD
Sbjct: 230 WSPDSGTLATGSDDKAIRLWD 250
Score = 64 (27.6 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 12/22 (54%), Positives = 13/22 (59%)
Query: 350 LAWSTDGQTLFAGYSDNTIRVW 371
LAWS D TL G D IR+W
Sbjct: 228 LAWSPDSGTLATGSDDKAIRLW 249
Score = 49 (22.3 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 14/59 (23%), Positives = 26/59 (44%)
Query: 162 QNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLW 220
Q + SA D + +W++ + ++ + H G V V G S GKD +++
Sbjct: 485 QQAFVASASEDGHIVLWDVKSKEVVQKIAAHDGVCFWVDVV--GDTMVSAGKDARILVY 541
Score = 46 (21.3 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 343 DPPMCLSLAWSTDGQTLFAGYSDNTIRVW 371
D P ++ +S +G+ + A D+ IR+W
Sbjct: 390 DNPAVTNVCFSPNGRYILAFNLDSCIRLW 418
Score = 43 (20.2 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 350 LAWSTDGQTLFAGYSDNTIRVWQV 373
LA+S G L +G D + +W V
Sbjct: 312 LAFSPKGNILASGSYDEAVFLWDV 335
Score = 41 (19.5 bits), Expect = 5.1e-11, Sum P(2) = 5.1e-11
Identities = 9/34 (26%), Positives = 18/34 (52%)
Query: 209 ASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCF 242
AS +D + +LWD+ + + + +D +CF
Sbjct: 490 ASASEDGHIVLWDVKSKEVVQKIAAHD---GVCF 520
Score = 37 (18.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 9/45 (20%), Positives = 20/45 (44%)
Query: 330 ELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVS 374
++R + +S A + + DG + + +D IR+W +
Sbjct: 334 DVRAGRLMRSLPAHSDPVSGIDFCRDGTLVVSCSTDGLIRIWDTA 378
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 233 (87.1 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 60/190 (31%), Positives = 89/190 (46%)
Query: 60 LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 119
L GH+ + I +S ++GS +LRLWDL A K R H + S+ F
Sbjct: 59 LTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGE 118
Query: 120 QIVSSSRDKTIKLWNTLAH-CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVW 178
+ S S D IKLW+ C F GH+ V C+ FSP+ + + SA D VK+W
Sbjct: 119 YLASGSVDSNIKLWDVRRKGCVFRY--KGHTQAVRCLAFSPDGK--WLASASDDSTVKLW 174
Query: 179 NLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDII 237
+L K+ + HT +N V P+ L ASG D LWDL + + ++
Sbjct: 175 DLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGVV 234
Query: 238 TALCFSPNRS 247
++ F+P+ S
Sbjct: 235 RSVLFNPDGS 244
Score = 200 (75.5 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 61/225 (27%), Positives = 107/225 (47%)
Query: 4 ETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGH 63
E ++ TL GH ++ + +P + + S S D+ + +W + R + R KGH
Sbjct: 93 EAAKILRTLMGHKASISSLDFHP-MGEYLASGSVDSNIKLWDVRRKGCVF-----RYKGH 146
Query: 64 SHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 123
+ + + S DG + S S D T++LWDL AGK F HT V V F + + S
Sbjct: 147 TQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLAS 206
Query: 124 SSRDKTIKLWNTLAHCKFTIV--EDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKV--WN 179
S D+T+KLW+ KF ++ +G + V V F+P+ + +G + ++V W
Sbjct: 207 GSADRTVKLWDLE---KFNMIGSSEGETGVVRSVLFNPDGS---CLYSGSENTLRVYGWE 260
Query: 180 LTNCKLKINHSGHTGYLNTVTVSPDGSLCAS-GGKDMNAMLWDLN 223
C + H G G ++ + +S + + S +++ + DLN
Sbjct: 261 PDRC-FDVVHVGW-GKVSDLAISNNQMIAVSYSHTNVSWYVVDLN 303
Score = 188 (71.2 bits), Expect = 5.9e-11, Sum P(2) = 5.9e-11
Identities = 52/209 (24%), Positives = 95/209 (45%)
Query: 105 HTKDVLSVAFSVDN-RQIVSSSRDKTIKLWN-TLAHCKFTIVEDGHSDWVSCVRFSPNHQ 162
H+ +V S+ + R + + D + +W + +C ++ GH+ V C++F+ + +
Sbjct: 19 HSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLT--GHTSAVGCIQFNSSEE 76
Query: 163 NPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
+V+ +++W+L K+ GH ++++ P G ASG D N LWD+
Sbjct: 77 R--VVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDV 134
Query: 223 N-DGKHLHTLVHNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSL 281
G H + L FSP+ + ++ S + L+ + GKM T F S
Sbjct: 135 RRKGCVFRYKGHTQAVRCLAFSPDGKW------LASASDDSTVKLWDLIAGKMITEFTSH 188
Query: 282 FRDVLSVAFSVDNRQIVSSSRDKTIKLWN 310
V V F + + S S D+T+KLW+
Sbjct: 189 TSAVNVVQFHPNEYLLASGSADRTVKLWD 217
Score = 137 (53.3 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 50/201 (24%), Positives = 88/201 (43%)
Query: 148 HSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT--NCKLKINHSGHTGYLNTVTVSPDG 205
HS VS + + ++ + G D V +W ++ NC + + +GHT + + +
Sbjct: 19 HSSNVSSLVLGKS-SGRLLATGGEDCRVNIWAVSKPNCIMSL--TGHTSAVGCIQFNSSE 75
Query: 206 SLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNL 264
+G + LWDL K L TL+ H I++L F P + ++ SN+
Sbjct: 76 ERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEY------LASGSVDSNI 129
Query: 265 ILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLET 324
L+ + + + V +AFS D + + S+S D T+KLW+ +A T T
Sbjct: 130 KLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHT 189
Query: 325 KKM-VEELRP-DVVSQSTKAD 343
+ V + P + + S AD
Sbjct: 190 SAVNVVQFHPNEYLLASGSAD 210
Score = 37 (18.1 bits), Expect = 5.9e-11, Sum P(2) = 5.9e-11
Identities = 5/15 (33%), Positives = 11/15 (73%)
Query: 359 LFAGYSDNTIRVWQV 373
L +G +D T+++W +
Sbjct: 204 LASGSADRTVKLWDL 218
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 231 (86.4 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 61/212 (28%), Positives = 101/212 (47%)
Query: 12 LNGHNGWVTQIATNP--KFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISD 69
+ GH+ V ++ +P +F T +C D++ +W L + + + +GHS + D
Sbjct: 304 IEGHSMRVARVTWHPSGRFLGT--TCY-DHSWRLWDL---EVQEEILHQ--EGHSKGVHD 355
Query: 70 IVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKT 129
+ DG+ A +G D R+WDL G+ E H K++ S+ FS + + + S D
Sbjct: 356 LHFHPDGSLAGTGGLDSFARVWDLRTGRCVMFLEGHIKEIYSINFSPNGFHVATGSGDNA 415
Query: 130 IKLWNTLAH-CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKIN 188
K+W+ C +TI H + VS V+F PN + ++ A +D K+W
Sbjct: 416 CKVWDLRQRRCIYTI--PAHQNLVSSVKFQPNDGHYLLTGA-YDNTAKIWTHPGWSPLKT 472
Query: 189 HSGHTGYLNTVTVSPDGSLCASGGKDMNAMLW 220
+GH G + V +SPDG L A+ D LW
Sbjct: 473 LAGHEGKVMGVDLSPDGQLIATCSYDRTFKLW 504
Score = 198 (74.8 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 62/244 (25%), Positives = 105/244 (43%)
Query: 11 TLNGHNGWVTQIATNPKFPDTI-------LSCSRDNTLIIWKLTRDDTNYGVPQKRLKGH 63
TL GHN V I+ +P+ T+ SC+ D ++ +W L D+ P ++GH
Sbjct: 253 TLRGHNTNVGAISFHPQATLTLEESDVNMASCAADGSVKLWSLDSDE-----PIADIEGH 307
Query: 64 SHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 123
S ++ + G + + +D + RLWDL + E H+K V + F D +
Sbjct: 308 SMRVARVTWHPSGRFLGTTCYDHSWRLWDLEVQEEILHQEGHSKGVHDLHFHPDGSLAGT 367
Query: 124 SSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNC 183
D ++W+ L + + +GH + + FSPN + + +G D KVW+L
Sbjct: 368 GGLDSFARVWD-LRTGRCVMFLEGHIKEIYSINFSPNGFH-VATGSG-DNACKVWDLRQR 424
Query: 184 KLKINHSGHTGYLNTVTVSP-DGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALC 241
+ H +++V P DG +G D A +W L TL H + +
Sbjct: 425 RCIYTIPAHQNLVSSVKFQPNDGHYLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGVD 484
Query: 242 FSPN 245
SP+
Sbjct: 485 LSPD 488
Score = 193 (73.0 bits), Expect = 5.1e-12, Sum P(2) = 5.1e-12
Identities = 59/237 (24%), Positives = 111/237 (46%)
Query: 74 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLW 133
SD N A S + D +++LW L + + E H+ V V + R + ++ D + +LW
Sbjct: 277 SDVNMA-SCAADGSVKLWSLDSDEPIADIEGHSMRVARVTWHPSGRFLGTTCYDHSWRLW 335
Query: 134 NTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHT 193
+ L + + ++GHS V + F P+ + + G D +VW+L + + GH
Sbjct: 336 D-LEVQEEILHQEGHSKGVHDLHFHPD--GSLAGTGGLDSFARVWDLRTGRCVMFLEGHI 392
Query: 194 GYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTL-VHNDIITALCFSPNRSFQKIK 252
+ ++ SP+G A+G D +WDL + ++T+ H ++++++ F PN +
Sbjct: 393 KEIYSINFSPNGFHVATGSGDNACKVWDLRQRRCIYTIPAHQNLVSSVKFQPNDGHYLLT 452
Query: 253 LDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLW 309
T + + +P ++T V+ V S D + I + S D+T KLW
Sbjct: 453 GAYDNT---AKIWTHP-GWSPLKT-LAGHEGKVMGVDLSPDGQLIATCSYDRTFKLW 504
Score = 159 (61.0 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 49/193 (25%), Positives = 91/193 (47%)
Query: 62 GHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF------S 115
G IS S + ++ SW +LW + R H +V +++F +
Sbjct: 214 GDDRPISYCQFSPNSKLLVTASWSGLCKLWKVPDCTLIRTLRGHNTNVGAISFHPQATLT 273
Query: 116 VDNRQI--VSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDR 173
++ + S + D ++KLW+ + +E GHS V+ V + P+ + + + +D
Sbjct: 274 LEESDVNMASCAADGSVKLWSLDSDEPIADIE-GHSMRVARVTWHPSGR--FLGTTCYDH 330
Query: 174 MVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV- 232
++W+L + ++ GH+ ++ + PDGSL +GG D A +WDL G+ + L
Sbjct: 331 SWRLWDLEVQEEILHQEGHSKGVHDLHFHPDGSLAGTGGLDSFARVWDLRTGRCVMFLEG 390
Query: 233 HNDIITALCFSPN 245
H I ++ FSPN
Sbjct: 391 HIKEIYSINFSPN 403
Score = 124 (48.7 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 51/215 (23%), Positives = 91/215 (42%)
Query: 114 FSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPN-----HQNPI-IV 167
FS +++ +V++S KLW + C GH+ V + F P ++ + +
Sbjct: 224 FSPNSKLLVTASWSGLCKLWK-VPDCTLIRTLRGHNTNVGAISFHPQATLTLEESDVNMA 282
Query: 168 SAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKH 227
S D VK+W+L + + + GH+ + VT P G + D + LWDL +
Sbjct: 283 SCAADGSVKLWSLDSDEPIADIEGHSMRVARVTWHPSGRFLGTTCYDHSWRLWDLEVQEE 342
Query: 228 -LHTLVHNDIITALCFSPNRSFQKIK-LDISRTLQKSNLILYPINHGKMETPFFSLFRDV 285
LH H+ + L F P+ S LD S ++ + G+ +++
Sbjct: 343 ILHQEGHSKGVHDLHFHPDGSLAGTGGLD-------SFARVWDLRTGRCVMFLEGHIKEI 395
Query: 286 LSVAFSVDNRQIVSSSRDKTIKLWNTLAH-CKFTI 319
S+ FS + + + S D K+W+ C +TI
Sbjct: 396 YSINFSPNGFHVATGSGDNACKVWDLRQRRCIYTI 430
Score = 48 (22.0 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 355 DGQTLFAGYSDNTIRVW 371
DG L G DNT ++W
Sbjct: 446 DGHYLLTGAYDNTAKIW 462
Score = 42 (19.8 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 349 SLAWSTDGQTLFAGYSDNTIRVWQV 373
S+ +S +G + G DN +VW +
Sbjct: 397 SINFSPNGFHVATGSGDNACKVWDL 421
Score = 37 (18.1 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 353 STDGQTLFAGYSDNTIRVW 371
S DGQ + D T ++W
Sbjct: 486 SPDGQLIATCSYDRTFKLW 504
>UNIPROTKB|E1C9D6 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS
EMBL:AADN02061119 IPI:IPI00578429 RefSeq:XP_425517.3
ProteinModelPortal:E1C9D6 PRIDE:E1C9D6 Ensembl:ENSGALT00000023410
GeneID:427945 KEGG:gga:427945 Uniprot:E1C9D6
Length = 340
Score = 204 (76.9 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 67/260 (25%), Positives = 111/260 (42%)
Query: 57 QKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 116
++ L+GH I + S+D +S S D L +WD + V++ A++
Sbjct: 48 RRTLRGHLAKIYAMHWSTDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAP 107
Query: 117 DNRQIVSSSRDKTIKLWNTLA---HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDR 173
+ D ++N + K + H+ ++SC RF + N I+ S+G D
Sbjct: 108 SGNFVACGGLDNMCSIYNLKTREGNVKVSRELSAHTGYLSCCRFLDD--NSIVTSSG-DT 164
Query: 174 MVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV- 232
+W++ + K GHTG ++ VSPD L SG D A LWD+ +G T
Sbjct: 165 TCALWDIETGQQKTVFLGHTGDCMSLAVSPDFKLFISGACDATAKLWDVREGTCRQTFSG 224
Query: 233 HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSV 292
H I A+CF PN D T + +L + + S+ + SVAFS
Sbjct: 225 HESDINAICFFPNGEAICTGSD-DATCRLFDL---RADQELIVYSHESIICGITSVAFSR 280
Query: 293 DNRQIVSSSRDKTIKLWNTL 312
R +++ D +W++L
Sbjct: 281 SGRLLLAGYDDFNCNIWDSL 300
Score = 197 (74.4 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 63/247 (25%), Positives = 109/247 (44%)
Query: 6 LQLRGTLNGHNGWVTQI--ATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGH 63
++ R TL GH + + +T+ K ++S S+D LI+W + + +P +
Sbjct: 45 MRTRRTLRGHLAKIYAMHWSTDSKL---LVSASQDGKLIVWDTYTTNKVHAIPLR----- 96
Query: 64 SHFISDIVLSSDGNYALSGSWDKTLRLWDLAA--G--KTTRRFEDHTKDVLSVAFSVDNR 119
S ++ + GN+ G D +++L G K +R HT LS +D+
Sbjct: 97 SSWVMTCAYAPSGNFVACGGLDNMCSIYNLKTREGNVKVSRELSAHT-GYLSCCRFLDDN 155
Query: 120 QIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
IV+SS D T LW+ + T+ GH+ + SP+ + + +S D K+W+
Sbjct: 156 SIVTSSGDTTCALWDIETGQQKTVFL-GHTGDCMSLAVSPDFK--LFISGACDATAKLWD 212
Query: 180 LTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDII-- 237
+ + SGH +N + P+G +G D L+DL + L H II
Sbjct: 213 VREGTCRQTFSGHESDINAICFFPNGEAICTGSDDATCRLFDLRADQELIVYSHESIICG 272
Query: 238 -TALCFS 243
T++ FS
Sbjct: 273 ITSVAFS 279
Score = 188 (71.2 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 61/230 (26%), Positives = 104/230 (45%)
Query: 16 NGWVTQIATNPKFPDTILSCSR-DNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSS 74
+ WV A P ++C DN I+ L + N V + L H+ ++S
Sbjct: 97 SSWVMTCAYAPS--GNFVACGGLDNMCSIYNLKTREGNVKV-SRELSAHTGYLSCCRFLD 153
Query: 75 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 134
D N ++ S D T LWD+ G+ F HT D +S+A S D + +S + D T KLW+
Sbjct: 154 D-NSIVTSSGDTTCALWDIETGQQKTVFLGHTGDCMSLAVSPDFKLFISGACDATAKLWD 212
Query: 135 TL-AHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL-TNCKLKI-NHSG 191
C+ T GH ++ + F PN + I + D ++++L + +L + +H
Sbjct: 213 VREGTCRQTF--SGHESDINAICFFPNGE--AICTGSDDATCRLFDLRADQELIVYSHES 268
Query: 192 HTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITAL 240
+ +V S G L +G D N +WD + + L H++ ++ L
Sbjct: 269 IICGITSVAFSRSGRLLLAGYDDFNCNIWDSLKAERVGILSGHDNRVSCL 318
Score = 187 (70.9 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 58/233 (24%), Positives = 100/233 (42%)
Query: 97 KTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVR 156
+T R H + ++ +S D++ +VS+S+D + +W+T K + S WV
Sbjct: 46 RTRRTLRGHLAKIYAMHWSTDSKLLVSASQDGKLIVWDTYTTNKVHAIPL-RSSWVMTCA 104
Query: 157 FSPNHQNPIIVSAGWDRMVKVWNLT----NCKLKINHSGHTGYLNTVTVSPDGSLCASGG 212
++P+ + G D M ++NL N K+ S HTGYL+ D S+ S G
Sbjct: 105 YAPSGN--FVACGGLDNMCSIYNLKTREGNVKVSRELSAHTGYLSCCRFLDDNSIVTSSG 162
Query: 213 KDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINH 271
D LWD+ G+ + H +L SP+ KL IS + L+ +
Sbjct: 163 -DTTCALWDIETGQQKTVFLGHTGDCMSLAVSPD-----FKLFISGACD-ATAKLWDVRE 215
Query: 272 GKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLET 324
G F D+ ++ F + I + S D T +L++ A + + E+
Sbjct: 216 GTCRQTFSGHESDINAICFFPNGEAICTGSDDATCRLFDLRADQELIVYSHES 268
Score = 167 (63.8 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 50/178 (28%), Positives = 81/178 (45%)
Query: 4 ETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGH 63
ET Q + GH G +A +P F +S + D T +W D G ++ GH
Sbjct: 172 ETGQQKTVFLGHTGDCMSLAVSPDFK-LFISGACDATAKLW-----DVREGTCRQTFSGH 225
Query: 64 SHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF--EDHTKDVLSVAFSVDNRQI 121
I+ I +G +GS D T RL+DL A + + E + SVAFS R +
Sbjct: 226 ESDINAICFFPNGEAICTGSDDATCRLFDLRADQELIVYSHESIICGITSVAFSRSGRLL 285
Query: 122 VSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
++ D +W++L + I+ GH + VSC+ + + + + WD +K+WN
Sbjct: 286 LAGYDDFNCNIWDSLKAERVGILS-GHDNRVSCLGVTADGM--AVATGSWDSFLKIWN 340
Score = 163 (62.4 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 51/214 (23%), Positives = 97/214 (45%)
Query: 12 LNGHNGWVTQIATNPKFPD--TILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISD 69
L+ H G+++ +F D +I++ S D T +W D G + GH+
Sbjct: 139 LSAHTGYLSCC----RFLDDNSIVTSSGDTTCALW-----DIETGQQKTVFLGHTGDCMS 189
Query: 70 IVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKT 129
+ +S D +SG+ D T +LWD+ G + F H D+ ++ F + I + S D T
Sbjct: 190 LAVSPDFKLFISGACDATAKLWDVREGTCRQTFSGHESDINAICFFPNGEAICTGSDDAT 249
Query: 130 IKLWNTLAHCKFTIVE-DGHSDWVSCVRFSPNHQNPIIVSAGWDRM-VKVWNLTNCKLKI 187
+L++ A + + + ++ V FS + + ++ AG+D +W+ +
Sbjct: 250 CRLFDLRADQELIVYSHESIICGITSVAFSRSGR---LLLAGYDDFNCNIWDSLKAERVG 306
Query: 188 NHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWD 221
SGH ++ + V+ DG A+G D +W+
Sbjct: 307 ILSGHDNRVSCLGVTADGMAVATGSWDSFLKIWN 340
Score = 58 (25.5 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 349 SLAWSTDGQTLFAGYSDNTIRVWQVSVTSRGG 380
S+A+S G+ L AGY D +W R G
Sbjct: 275 SVAFSRSGRLLLAGYDDFNCNIWDSLKAERVG 306
Score = 41 (19.5 bits), Expect = 6.2e-14, Sum P(2) = 6.2e-14
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 285 VLSVAFSVDNRQIVSSSRDKTIKLWN 310
V + + D + + S D +K+WN
Sbjct: 315 VSCLGVTADGMAVATGSWDSFLKIWN 340
Score = 39 (18.8 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 347 CLSLAWSTDGQTLFAGYSDNTIRVW 371
CL + + DG + G D+ +++W
Sbjct: 317 CLGV--TADGMAVATGSWDSFLKIW 339
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 218 (81.8 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 81/256 (31%), Positives = 122/256 (47%)
Query: 75 DGNYAL-SGSWDKTLRLWDLAAGKTTRRF--EDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
DG+ + +GS D +++W + K ++ E H V+SV S + SSS D I+
Sbjct: 30 DGSETIVTGSLDDLVKVWKWSDEKLELQWTLEGHQLGVVSVNISQNGAIAASSSLDAHIR 89
Query: 132 LWNTLAHCKFTIVEDGHSD-WVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKL-KINH 189
LW+ + ++ G D W V FSP+ + ++ G + KV N+ + K H
Sbjct: 90 LWDLETGKQIKSMDAGPVDAWT--VAFSPDSK---YIATG-SHLGKV-NIFGVESGKKEH 142
Query: 190 SGHT-G-YLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNR 246
S T G ++ ++ SPDG ASG D ++D+ GK LHTL H I +L FSP+
Sbjct: 143 SLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDS 202
Query: 247 SFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTI 306
D + +Y + H + VLSVAFS D+ VSSS DK+I
Sbjct: 203 QLLVTASD------DGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSI 256
Query: 307 KLWNTLAH-CKFTIVD 321
K+W+T + C T D
Sbjct: 257 KVWDTSSRSCVNTFFD 272
Score = 217 (81.4 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 53/169 (31%), Positives = 84/169 (49%)
Query: 54 GVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 113
G + L FI I S DG Y SG+ D + ++D+A GK E H + S+
Sbjct: 138 GKKEHSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLT 197
Query: 114 FSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDR 173
FS D++ +V++S D IK+++ + H GH WV V FSP+ + VS+ D+
Sbjct: 198 FSPDSQLLVTASDDGYIKIYD-VQHANLAGTLSGHGSWVLSVAFSPDDTH--FVSSSSDK 254
Query: 174 MVKVWNLTNCKLKIN-HSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWD 221
+KVW+ T+ + +N H + +V +P GS S G D ++D
Sbjct: 255 SIKVWD-TSSRSCVNTFFDHQDQVWSVKYNPTGSKIVSAGDDRAIHIYD 302
Score = 203 (76.5 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 62/247 (25%), Positives = 116/247 (46%)
Query: 2 STETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLK 61
S E L+L+ TL GH V + + S S D + +W L +T G K +
Sbjct: 50 SDEKLELQWTLEGHQLGVVSVNISQNGA-IAASSSLDAHIRLWDL---ET--GKQIKSMD 103
Query: 62 GHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 121
+ S D Y +GS + ++ + +GK + K +LS+A+S D + +
Sbjct: 104 AGPVDAWTVAFSPDSKYIATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDGKYL 163
Query: 122 VSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT 181
S + D I +++ +A K +GH+ + + FSP+ Q ++V+A D +K++++
Sbjct: 164 ASGAIDGIINIFD-IATGKLLHTLEGHAMPIRSLTFSPDSQ--LLVTASDDGYIKIYDVQ 220
Query: 182 NCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITAL 240
+ L SGH ++ +V SPD + S D + +WD + ++T H D + ++
Sbjct: 221 HANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDHQDQVWSV 280
Query: 241 CFSPNRS 247
++P S
Sbjct: 281 KYNPTGS 287
Score = 158 (60.7 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 45/171 (26%), Positives = 83/171 (48%)
Query: 145 EDGHSD--WVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS--GHTGYLNTVT 200
E H D W + S + IV+ D +VKVW ++ KL++ + GH + +V
Sbjct: 12 EHAHEDAIWTAAWGRSEKDGSETIVTGSLDDLVKVWKWSDEKLELQWTLEGHQLGVVSVN 71
Query: 201 VSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIIT-ALCFSPNRSFQKIKLDISRTL 259
+S +G++ AS D + LWDL GK + ++ + + FSP+ + + L
Sbjct: 72 ISQNGAIAASSSLDAHIRLWDLETGKQIKSMDAGPVDAWTVAFSPDSKY----IATGSHL 127
Query: 260 QKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWN 310
K N+ + + GK E + + +LS+A+S D + + S + D I +++
Sbjct: 128 GKVNI--FGVESGKKEHSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFD 176
Score = 137 (53.3 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 60/266 (22%), Positives = 115/266 (43%)
Query: 121 IVSSSRDKTIKLW---NTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKV 177
IV+ S D +K+W + ++T+ +GH V V S N I S+ D +++
Sbjct: 35 IVTGSLDDLVKVWKWSDEKLELQWTL--EGHQLGVVSVNISQN--GAIAASSSLDAHIRL 90
Query: 178 WNL-TNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTL-VHND 235
W+L T ++K +G TV SPD A+G ++ + GK H+L
Sbjct: 91 WDLETGKQIKSMDAGPVDAW-TVAFSPDSKYIATGSHLGKVNIFGVESGKKEHSLDTRGK 149
Query: 236 IITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNR 295
I ++ +SP+ + ++ + ++ I GK+ + S+ FS D++
Sbjct: 150 FILSIAYSPDGKY------LASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ 203
Query: 296 QIVSSSRDKTIKLWNTL-AHCKFTIVDLETKKMVEELRPDVVS-QSTKADPPMCLSLAWS 353
+V++S D IK+++ A+ T+ + + PD S+ +D + + W
Sbjct: 204 LLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKV---WD 260
Query: 354 TDGQTLFAGYSDNTIRVWQVSVTSRG 379
T ++ + D+ +VW V G
Sbjct: 261 TSSRSCVNTFFDHQDQVWSVKYNPTG 286
Score = 44 (20.5 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 349 SLAWSTDGQTLFAGYSDNTIRVWQVSVTSRGG 380
SL +S D Q L D I+++ V + G
Sbjct: 195 SLTFSPDSQLLVTASDDGYIKIYDVQHANLAG 226
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 233 (87.1 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 69/240 (28%), Positives = 108/240 (45%)
Query: 1 MSTETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRL 60
M +T L GH+G V + +P + +LS S D T+ +W L G
Sbjct: 526 MDEKTASELKILYGHSGPVYGASFSPD-RNYLLSSSEDGTVRLWSLQTFTCLVGY----- 579
Query: 61 KGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ 120
KGH++ + D S G Y +SG D+ RLW + R F H DV F ++
Sbjct: 580 KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNY 639
Query: 121 IVSSSRDKTIKLWNTL-AHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
+ + S D+T++LW+ L +C + GH + + FSPN + + + D V +W+
Sbjct: 640 VATGSADRTVRLWDVLNGNC--VRIFTGHKGPIHSLTFSPNGR--FLATGATDGRVLLWD 695
Query: 180 LTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITA 239
+ + + GHT + ++ S DG + ASG D LWD K L +D TA
Sbjct: 696 IGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAI--KAFEDLETDDFTTA 753
Score = 224 (83.9 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 68/238 (28%), Positives = 106/238 (44%)
Query: 89 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGH 148
R+ D + H+ V +FS D ++SSS D T++LW+ L + GH
Sbjct: 524 RIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWS-LQTFTCLVGYKGH 582
Query: 149 SDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCK-LKINHSGHTGYLNTVTVSPDGSL 207
+ V +FSP VS G DR+ ++W + + L+I +GH +N P+ +
Sbjct: 583 NYPVWDTQFSP--YGYYFVSGGHDRVARLWATDHYQPLRI-FAGHLADVNCTRFHPNSNY 639
Query: 208 CASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLIL 266
A+G D LWD+ +G + H I +L FSPN F ++ ++L
Sbjct: 640 VATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRF------LATGATDGRVLL 693
Query: 267 YPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLET 324
+ I HG M V S+ FS D + S S D T++LW+ + DLET
Sbjct: 694 WDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAIK----AFEDLET 747
Score = 174 (66.3 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 62/236 (26%), Positives = 102/236 (43%)
Query: 14 GHNG--WVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV 71
GHN W TQ + + +S D +W T++ P + GH ++
Sbjct: 581 GHNYPVWDTQFSPYGYY---FVSGGHDRVARLWA-----TDHYQPLRIFAGHLADVNCTR 632
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
+ NY +GS D+T+RLWD+ G R F H + S+ FS + R + + + D +
Sbjct: 633 FHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVL 692
Query: 132 LWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNC--KLKINH 189
LW+ + H GH+D V +RFS + + I+ S D V++W+ L+ +
Sbjct: 693 LWD-IGHGLMVGELKGHTDTVCSLRFSRDGE--ILASGSMDNTVRLWDAIKAFEDLETDD 749
Query: 190 -SGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCFSP 244
+ TG++N P+ S G M HLH N ++ A +SP
Sbjct: 750 FTTATGHINL----PENSQELLLGTYMTKS----TPVVHLHFTRRNLVLAAGAYSP 797
Score = 108 (43.1 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 43/183 (23%), Positives = 74/183 (40%)
Query: 67 ISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSR 126
++ + ++ D + G D T+R+W + K + SV + D I S
Sbjct: 471 LTAVDVTDDSSLIAGGFADSTVRVWSVTP-----------KKLRSVKQASDLSLIDKESD 519
Query: 127 DKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLK 186
D ++ + + I+ GHS V FSP+ ++S+ D V++W+L
Sbjct: 520 DVLERIMDEKTASELKILY-GHSGPVYGASFSPDRN--YLLSSSEDGTVRLWSLQTFTCL 576
Query: 187 INHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPN 245
+ + GH + SP G SGG D A LW + + L H + F PN
Sbjct: 577 VGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPN 636
Query: 246 RSF 248
++
Sbjct: 637 SNY 639
Score = 68 (29.0 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 346 MCLSLAWSTDGQTLFAGYSDNTIRVW 371
+C SL +S DG+ L +G DNT+R+W
Sbjct: 712 VC-SLRFSRDGEILASGSMDNTVRLW 736
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 233 (87.1 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 69/240 (28%), Positives = 108/240 (45%)
Query: 1 MSTETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRL 60
M +T L GH+G V + +P + +LS S D T+ +W L G
Sbjct: 528 MDEKTASELKILYGHSGPVYGASFSPD-RNYLLSSSEDGTVRLWSLQTFTCLVGY----- 581
Query: 61 KGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ 120
KGH++ + D S G Y +SG D+ RLW + R F H DV F ++
Sbjct: 582 KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNY 641
Query: 121 IVSSSRDKTIKLWNTL-AHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
+ + S D+T++LW+ L +C + GH + + FSPN + + + D V +W+
Sbjct: 642 VATGSADRTVRLWDVLNGNC--VRIFTGHKGPIHSLTFSPNGR--FLATGATDGRVLLWD 697
Query: 180 LTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITA 239
+ + + GHT + ++ S DG + ASG D LWD K L +D TA
Sbjct: 698 IGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAI--KAFEDLETDDFTTA 755
Score = 224 (83.9 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 68/238 (28%), Positives = 106/238 (44%)
Query: 89 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGH 148
R+ D + H+ V +FS D ++SSS D T++LW+ L + GH
Sbjct: 526 RIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWS-LQTFTCLVGYKGH 584
Query: 149 SDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCK-LKINHSGHTGYLNTVTVSPDGSL 207
+ V +FSP VS G DR+ ++W + + L+I +GH +N P+ +
Sbjct: 585 NYPVWDTQFSP--YGYYFVSGGHDRVARLWATDHYQPLRI-FAGHLADVNCTRFHPNSNY 641
Query: 208 CASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLIL 266
A+G D LWD+ +G + H I +L FSPN F ++ ++L
Sbjct: 642 VATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRF------LATGATDGRVLL 695
Query: 267 YPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLET 324
+ I HG M V S+ FS D + S S D T++LW+ + DLET
Sbjct: 696 WDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAIK----AFEDLET 749
Score = 174 (66.3 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 62/236 (26%), Positives = 102/236 (43%)
Query: 14 GHNG--WVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV 71
GHN W TQ + + +S D +W T++ P + GH ++
Sbjct: 583 GHNYPVWDTQFSPYGYY---FVSGGHDRVARLWA-----TDHYQPLRIFAGHLADVNCTR 634
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
+ NY +GS D+T+RLWD+ G R F H + S+ FS + R + + + D +
Sbjct: 635 FHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVL 694
Query: 132 LWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNC--KLKINH 189
LW+ + H GH+D V +RFS + + I+ S D V++W+ L+ +
Sbjct: 695 LWD-IGHGLMVGELKGHTDTVCSLRFSRDGE--ILASGSMDNTVRLWDAIKAFEDLETDD 751
Query: 190 -SGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCFSP 244
+ TG++N P+ S G M HLH N ++ A +SP
Sbjct: 752 FTTATGHINL----PENSQELLLGTYMTKS----TPVVHLHFTRRNLVLAAGAYSP 799
Score = 108 (43.1 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 43/183 (23%), Positives = 74/183 (40%)
Query: 67 ISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSR 126
++ + ++ D + G D T+R+W + K + SV + D I S
Sbjct: 473 LTAVDVTDDSSLIAGGFADSTVRVWSVTP-----------KKLRSVKQASDLSLIDKESD 521
Query: 127 DKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLK 186
D ++ + + I+ GHS V FSP+ ++S+ D V++W+L
Sbjct: 522 DVLERIMDEKTASELKILY-GHSGPVYGASFSPDRN--YLLSSSEDGTVRLWSLQTFTCL 578
Query: 187 INHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPN 245
+ + GH + SP G SGG D A LW + + L H + F PN
Sbjct: 579 VGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPN 638
Query: 246 RSF 248
++
Sbjct: 639 SNY 641
Score = 68 (29.0 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 346 MCLSLAWSTDGQTLFAGYSDNTIRVW 371
+C SL +S DG+ L +G DNT+R+W
Sbjct: 714 VC-SLRFSRDGEILASGSMDNTVRLW 738
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 233 (87.1 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 69/240 (28%), Positives = 108/240 (45%)
Query: 1 MSTETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRL 60
M +T L GH+G V + +P + +LS S D T+ +W L G
Sbjct: 529 MDEKTASELKILYGHSGPVYGASFSPD-RNYLLSSSEDGTVRLWSLQTFTCLVGY----- 582
Query: 61 KGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ 120
KGH++ + D S G Y +SG D+ RLW + R F H DV F ++
Sbjct: 583 KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNY 642
Query: 121 IVSSSRDKTIKLWNTL-AHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
+ + S D+T++LW+ L +C + GH + + FSPN + + + D V +W+
Sbjct: 643 VATGSADRTVRLWDVLNGNC--VRIFTGHKGPIHSLTFSPNGR--FLATGATDGRVLLWD 698
Query: 180 LTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITA 239
+ + + GHT + ++ S DG + ASG D LWD K L +D TA
Sbjct: 699 IGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAV--KAFEDLETDDFTTA 756
Score = 223 (83.6 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 68/238 (28%), Positives = 106/238 (44%)
Query: 89 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGH 148
R+ D + H+ V +FS D ++SSS D T++LW+ L + GH
Sbjct: 527 RIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWS-LQTFTCLVGYKGH 585
Query: 149 SDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCK-LKINHSGHTGYLNTVTVSPDGSL 207
+ V +FSP VS G DR+ ++W + + L+I +GH +N P+ +
Sbjct: 586 NYPVWDTQFSP--YGYYFVSGGHDRVARLWATDHYQPLRI-FAGHLADVNCTRFHPNSNY 642
Query: 208 CASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLIL 266
A+G D LWD+ +G + H I +L FSPN F ++ ++L
Sbjct: 643 VATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRF------LATGATDGRVLL 696
Query: 267 YPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLET 324
+ I HG M V S+ FS D + S S D T++LW+ + DLET
Sbjct: 697 WDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVK----AFEDLET 750
Score = 175 (66.7 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 62/236 (26%), Positives = 102/236 (43%)
Query: 14 GHNG--WVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV 71
GHN W TQ + + +S D +W T++ P + GH ++
Sbjct: 584 GHNYPVWDTQFSPYGYY---FVSGGHDRVARLWA-----TDHYQPLRIFAGHLADVNCTR 635
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
+ NY +GS D+T+RLWD+ G R F H + S+ FS + R + + + D +
Sbjct: 636 FHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVL 695
Query: 132 LWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNC--KLKINH 189
LW+ + H GH+D V +RFS + + I+ S D V++W+ L+ +
Sbjct: 696 LWD-IGHGLMVGELKGHTDTVCSLRFSRDGE--ILASGSMDNTVRLWDAVKAFEDLETDD 752
Query: 190 -SGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCFSP 244
+ TG++N P+ S G M HLH N ++ A +SP
Sbjct: 753 FTTATGHINL----PENSQELLLGTYMTKS----TPVVHLHFTRRNLVLAAGAYSP 800
Score = 110 (43.8 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 43/183 (23%), Positives = 74/183 (40%)
Query: 67 ISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSR 126
++ + ++ D + G D T+R+W + K + SV + D I S
Sbjct: 474 LTAVDVTDDSSLIAGGFADSTVRVWSVTP-----------KKLRSVKQAADLSLIDKESD 522
Query: 127 DKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLK 186
D ++ + + I+ GHS V FSP+ ++S+ D V++W+L
Sbjct: 523 DVLERIMDEKTASELKILY-GHSGPVYGASFSPDRN--YLLSSSEDGTVRLWSLQTFTCL 579
Query: 187 INHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPN 245
+ + GH + SP G SGG D A LW + + L H + F PN
Sbjct: 580 VGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPN 639
Query: 246 RSF 248
++
Sbjct: 640 SNY 642
Score = 68 (29.0 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 346 MCLSLAWSTDGQTLFAGYSDNTIRVW 371
+C SL +S DG+ L +G DNT+R+W
Sbjct: 715 VC-SLRFSRDGEILASGSMDNTVRLW 739
>DICTYBASE|DDB_G0286457 [details] [associations]
symbol:strap "putative serine-threonine kinase
receptor-associated protein" species:44689 "Dictyostelium
discoideum" [GO:0005575 "cellular_component" evidence=ND]
[GO:0030512 "negative regulation of transforming growth factor beta
receptor signaling pathway" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0286457
GenomeReviews:CM000153_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AAFI02000085 GO:GO:0030512
InterPro:IPR013979 Pfam:PF08662 KO:K13137 OMA:LWQTTVG
RefSeq:XP_637742.1 ProteinModelPortal:Q54LT8
EnsemblProtists:DDB0233062 GeneID:8625608 KEGG:ddi:DDB_G0286457
InParanoid:Q54LT8 ProtClustDB:CLSZ2430103 Uniprot:Q54LT8
Length = 293
Score = 202 (76.2 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 72/255 (28%), Positives = 118/255 (46%)
Query: 62 GHSHFISDIVLS---SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN 118
GHS +SD+ S SDG++ +S D + L + G FE H V S F+
Sbjct: 9 GHSRPVSDLSFSNENSDGSFIVSACLDGSPMLRNGENGDWIGTFEGHKGAVWSSRFNSTA 68
Query: 119 RQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVW 178
Q +++S D T+KLW+TL + +E H V FS N N +V+ G +++++++
Sbjct: 69 SQALTASADYTVKLWDTLNGSEILSIE--HQSIVKTADFSNN--NSRVVTGGSEKILRIF 124
Query: 179 NLT--NCKLKINHSGHTGYLNTVTVSP-DGSLCASGGKDMNAMLWDLNDGKHLHTLVHND 235
+L N L + SGHT + T T S + + SGG D +WDL G + +L
Sbjct: 125 DLERPNDPL-LQISGHTNTIKTATWSVHNDDIVLSGGLDEVIRIWDLRSGTQV-SLCAKS 182
Query: 236 IITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNR 295
IT++ FS +R F T + YP+ +SL DV + DN
Sbjct: 183 SITSMEFSKDRRFLVTTAGNEVTFWDAQSF-YPLK-------VYSLPFDVNCASLHPDNS 234
Query: 296 QIVSSSRDKTIKLWN 310
+ ++ D + +++
Sbjct: 235 KFIAGGSDFWVHVYD 249
Score = 158 (60.7 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 60/220 (27%), Positives = 101/220 (45%)
Query: 5 TLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTR--DDTNYGVPQKRLKG 62
T++L TLNG + + K D + SR T K+ R D P ++ G
Sbjct: 79 TVKLWDTLNGSEILSIEHQSIVKTADFSNNNSRVVTGGSEKILRIFDLERPNDPLLQISG 138
Query: 63 HSHFISDIVLS-SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 121
H++ I S + + LSG D+ +R+WDL +G T+ + S+ FS D R +
Sbjct: 139 HTNTIKTATWSVHNDDIVLSGGLDEVIRIWDLRSG--TQVSLCAKSSITSMEFSKDRRFL 196
Query: 122 VSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL- 180
V+++ ++ + W+ + + V+C P+ N ++ G D V V++
Sbjct: 197 VTTAGNE-VTFWDAQSFYPLKVYSLPFD--VNCASLHPD--NSKFIAGGSDFWVHVYDFS 251
Query: 181 TNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLW 220
T ++++N GH G +N SPDG+ ASG D LW
Sbjct: 252 TGNEIEVN-KGHHGPVNCCRFSPDGASFASGSLDGTIRLW 290
Score = 134 (52.2 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 56/254 (22%), Positives = 113/254 (44%)
Query: 61 KGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ 120
+GH + +S + AL+ S D T++LWD G E H V + FS +N +
Sbjct: 53 EGHKGAVWSSRFNSTASQALTASADYTVKLWDTLNGSEILSIE-HQSIVKTADFSNNNSR 111
Query: 121 IVSSSRDKTIKLWNTLAHCKFTIVE-DGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
+V+ +K +++++ L +++ GH++ + +S H + I++S G D ++++W+
Sbjct: 112 VVTGGSEKILRIFD-LERPNDPLLQISGHTNTIKTATWSV-HNDDIVLSGGLDEVIRIWD 169
Query: 180 LTNCKLKINHSGHTGYLNTVTVSPDGS-LCASGGKDMNAMLWDLNDGKHLHTLVHNDIIT 238
L + +++ + + ++ S D L + G ++ WD + + L +
Sbjct: 170 LRS-GTQVSLCAKSS-ITSMEFSKDRRFLVTTAGNEVT--FWD---AQSFYPLK----VY 218
Query: 239 ALCFSPNRSFQKIKLDISRTLQKSN---LILYPINHGKMETPFFSLFRDVLSVAFSVDNR 295
+L F N + + D S+ + + + +Y + G V FS D
Sbjct: 219 SLPFDVNCA--SLHPDNSKFIAGGSDFWVHVYDFSTGNEIEVNKGHHGPVNCCRFSPDGA 276
Query: 296 QIVSSSRDKTIKLW 309
S S D TI+LW
Sbjct: 277 SFASGSLDGTIRLW 290
Score = 50 (22.7 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 352 WSTDGQTLFAGYSDNTIRVWQ 372
+S DG + +G D TIR+W+
Sbjct: 271 FSPDGASFASGSLDGTIRLWK 291
>ASPGD|ASPL0000054735 [details] [associations]
symbol:AN0292 species:162425 "Emericella nidulans"
[GO:0000124 "SAGA complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 HOGENOM:HOG000212424 ProteinModelPortal:C8VUA4
EnsemblFungi:CADANIAT00002423 OMA:GGIWSLS Uniprot:C8VUA4
Length = 606
Score = 203 (76.5 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 49/158 (31%), Positives = 75/158 (47%)
Query: 71 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 130
V ++ + LS S D+T+RLW L + ++ H + V + + VS DKT
Sbjct: 326 VAPTNARWLLSSSADRTIRLWSLDLWQCMVVYKGHDQPVWDLQWGPFGHYFVSGGHDKTA 385
Query: 131 KLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS 190
+LW T H + + GH V CV F PN + + + DR V++W +T +
Sbjct: 386 RLWVT-DHIRQQRIFVGHEQDVDCVCFHPN--SAYVFTGSSDRTVRMWAVTTGNAVRMFT 442
Query: 191 GHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHL 228
GHTG + + S DG AS + +LWDL G+ L
Sbjct: 443 GHTGNITALACSRDGKTLASADDHGSILLWDLGPGRLL 480
Score = 172 (65.6 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 53/197 (26%), Positives = 91/197 (46%)
Query: 32 ILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLW 91
+LS S D T+ +W L D V K GH + D+ G+Y +SG DKT RLW
Sbjct: 334 LLSSSADRTIRLWSL--DLWQCMVVYK---GHDQPVWDLQWGPFGHYFVSGGHDKTARLW 388
Query: 92 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDW 151
+ R F H +DV V F ++ + + S D+T+++W + GH+
Sbjct: 389 VTDHIRQQRIFVGHEQDVDCVCFHPNSAYVFTGSSDRTVRMWAVTTGNAVRMFT-GHTGN 447
Query: 152 VSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGH-TGYLNTVTVSPDGSLCAS 210
++ + S + + + SA + +W+L +L GH G + +++ S + ++ S
Sbjct: 448 ITALACSRDGKT--LASADDHGSILLWDLGPGRLLKRMRGHGKGGIWSLSWSVESNVLVS 505
Query: 211 GGKDMNAMLWDLNDGKH 227
GG D +WD+ H
Sbjct: 506 GGADGTVRVWDVMGPAH 522
Score = 149 (57.5 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 48/202 (23%), Positives = 94/202 (46%)
Query: 119 RQIVSSSRDKTIKLWNT-LAHCKFTIVEDGHSDWVSCVRFSP-NHQNPIIVSAGWDRMVK 176
R ++SSS D+TI+LW+ L C +V GH V +++ P H VS G D+ +
Sbjct: 332 RWLLSSSADRTIRLWSLDLWQCM--VVYKGHDQPVWDLQWGPFGHY---FVSGGHDKTAR 386
Query: 177 VWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HND 235
+W + + + GH ++ V P+ + +G D +W + G + H
Sbjct: 387 LWVTDHIRQQRIFVGHEQDVDCVCFHPNSAYVFTGSSDRTVRMWAVTTGNAVRMFTGHTG 446
Query: 236 IITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRD-VLSVAFSVDN 294
ITAL S + ++ +++L+ + G++ + + S+++SV++
Sbjct: 447 NITALACSRDGK------TLASADDHGSILLWDLGPGRLLKRMRGHGKGGIWSLSWSVES 500
Query: 295 RQIVSSSRDKTIKLWNTL--AH 314
+VS D T+++W+ + AH
Sbjct: 501 NVLVSGGADGTVRVWDVMGPAH 522
Score = 72 (30.4 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 349 SLAWSTDGQTLFAGYSDNTIRVWQV 373
SL+WS + L +G +D T+RVW V
Sbjct: 493 SLSWSVESNVLVSGGADGTVRVWDV 517
Score = 38 (18.4 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 6/21 (28%), Positives = 13/21 (61%)
Query: 114 FSVDNRQIVSSSRDKTIKLWN 134
FS DN + + ++ I++W+
Sbjct: 261 FSDDNLLVAAGMQESYIRVWS 281
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 229 (85.7 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 60/222 (27%), Positives = 109/222 (49%)
Query: 42 IIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR 101
++ KL + +N +I + S DG +G+ DK +R+WDL+ + +
Sbjct: 233 LVAKLIDESSNENKDDNTTASGDLYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKI 292
Query: 102 FEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNT-LAHCKFTI-VEDGHSDWVSCVRFSP 159
H +D+ S+ F D ++VS S D+++++W+ + C T+ +EDG V+ V SP
Sbjct: 293 LRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIEDG----VTTVAVSP 348
Query: 160 NHQNPIIVSAGWDRMVKVWNLTNCKL--KI-----NHSGHTGYLNTVTVSPDGSLCASGG 212
+ + +I + DR V+VW+ T L ++ N +GH + +V S +G ASG
Sbjct: 349 DGK--LIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGS 406
Query: 213 KDMNAMLWDL---NDGK---HLHTLVHNDIITALCFSPNRSF 248
D LW L +D K + + H D + ++C +P+ +
Sbjct: 407 LDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEY 448
Score = 226 (84.6 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 71/233 (30%), Positives = 112/233 (48%)
Query: 29 PD-TILSCSRDNTLI-IWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDK 86
PD +L+ ++ LI IW L+ T + K L+GH I + DG+ +SGS D+
Sbjct: 265 PDGKLLATGAEDKLIRIWDLS---TKRII--KILRGHEQDIYSLDFFPDGDRLVSGSGDR 319
Query: 87 TLRLWDLAAGKT--TRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIV 144
++R+WDL + T ED V +VA S D + I + S D+T+++W++ +
Sbjct: 320 SVRIWDLRTSQCSLTLSIED---GVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERL 376
Query: 145 E------DGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLK-----INHSGHT 193
+ +GH D V V FS N + I S DR VK+W+L K + + GH
Sbjct: 377 DSGNENGNGHEDSVYSVAFSNNGEQ--IASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHK 434
Query: 194 GYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPN 245
++ +V +PD SG KD + WD G L L H + + ++ S N
Sbjct: 435 DFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNPLLMLQGHRNSVISVAVSLN 487
Score = 201 (75.8 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 59/210 (28%), Positives = 97/210 (46%)
Query: 109 VLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVS 168
+ SV FS D + + + + DK I++W+ L+ + + GH + + F P+ +VS
Sbjct: 258 IRSVCFSPDGKLLATGAEDKLIRIWD-LSTKRIIKILRGHEQDIYSLDFFPDGDR--LVS 314
Query: 169 AGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHL 228
DR V++W+L + + S G + TV VSPDG L A+G D +WD G +
Sbjct: 315 GSGDRSVRIWDLRTSQCSLTLSIEDG-VTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLV 373
Query: 229 HTLV--------HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFS 280
L H D + ++ FS N Q + RT++ +L E +
Sbjct: 374 ERLDSGNENGNGHEDSVYSVAFS-NNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIG 432
Query: 281 LFRDVLSVAFSVDNRQIVSSSRDKTIKLWN 310
VLSV + DN I+S S+D+ + W+
Sbjct: 433 HKDFVLSVCCTPDNEYILSGSKDRGVIFWD 462
Score = 165 (63.1 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 55/225 (24%), Positives = 107/225 (47%)
Query: 104 DHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN-TLAHCKFTIVEDGHSD------------ 150
DH+ V V FS D + +++ +KT +++N T ++++ ++
Sbjct: 198 DHSSVVCCVRFSRDGK-FIATGCNKTTQVFNVTTGELVAKLIDESSNENKDDNTTASGDL 256
Query: 151 WVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKL-KINHSGHTGYLNTVTVSPDGSLCA 209
++ V FSP+ + ++ + D+++++W+L+ ++ KI GH + ++ PDG
Sbjct: 257 YIRSVCFSPDGK--LLATGAEDKLIRIWDLSTKRIIKILR-GHEQDIYSLDFFPDGDRLV 313
Query: 210 SGGKDMNAMLWDLNDGKHLHTLVHNDIITALCFSPNRSFQKIKLDISRTLQ----KSNLI 265
SG D + +WDL + TL D +T + SP+ + RT++ + +
Sbjct: 314 SGSGDRSVRIWDLRTSQCSLTLSIEDGVTTVAVSPDGKLIAAG-SLDRTVRVWDSTTGFL 372
Query: 266 LYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWN 310
+ ++ G V SVAFS + QI S S D+T+KLW+
Sbjct: 373 VERLDSGNENGNGHE--DSVYSVAFSNNGEQIASGSLDRTVKLWH 415
Score = 159 (61.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 64/241 (26%), Positives = 117/241 (48%)
Query: 148 HSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKL--KI-------NHSGHT---G- 194
HS V CVRFS + + ++ G ++ +V+N+T +L K+ N +T G
Sbjct: 199 HSSVVCCVRFSRDGK---FIATGCNKTTQVFNVTTGELVAKLIDESSNENKDDNTTASGD 255
Query: 195 -YLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIK 252
Y+ +V SPDG L A+G +D +WDL+ + + L H I +L F P+ +
Sbjct: 256 LYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGD----R 311
Query: 253 LDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTL 312
L +S + +S + ++ + + S+ V +VA S D + I + S D+T+++W
Sbjct: 312 L-VSGSGDRS-VRIWDLRTSQCSLTL-SIEDGVTTVAVSPDGKLIAAGSLDRTVRVW--- 365
Query: 313 AHCKFTIVDLETKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQ 372
D T +VE L D +++ S+A+S +G+ + +G D T+++W
Sbjct: 366 --------DSTTGFLVERL--DSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWH 415
Query: 373 V 373
+
Sbjct: 416 L 416
Score = 137 (53.3 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 35/125 (28%), Positives = 56/125 (44%)
Query: 13 NGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVL 72
NGH V +A + + I S S D T+ +W L + GH F+ +
Sbjct: 384 NGHEDSVYSVAFSNN-GEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCC 442
Query: 73 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ----IVSSSRDK 128
+ D Y LSGS D+ + WD A+G + H V+SVA S++++ + S D
Sbjct: 443 TPDNEYILSGSKDRGVIFWDQASGNPLLMLQGHRNSVISVAVSLNSKGTEGIFATGSGDC 502
Query: 129 TIKLW 133
++W
Sbjct: 503 KARIW 507
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 229 (85.7 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 60/222 (27%), Positives = 109/222 (49%)
Query: 42 IIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR 101
++ KL + +N +I + S DG +G+ DK +R+WDL+ + +
Sbjct: 233 LVAKLIDESSNENKDDNTTASGDLYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKI 292
Query: 102 FEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNT-LAHCKFTI-VEDGHSDWVSCVRFSP 159
H +D+ S+ F D ++VS S D+++++W+ + C T+ +EDG V+ V SP
Sbjct: 293 LRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIEDG----VTTVAVSP 348
Query: 160 NHQNPIIVSAGWDRMVKVWNLTNCKL--KI-----NHSGHTGYLNTVTVSPDGSLCASGG 212
+ + +I + DR V+VW+ T L ++ N +GH + +V S +G ASG
Sbjct: 349 DGK--LIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGS 406
Query: 213 KDMNAMLWDL---NDGK---HLHTLVHNDIITALCFSPNRSF 248
D LW L +D K + + H D + ++C +P+ +
Sbjct: 407 LDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEY 448
Score = 226 (84.6 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 71/233 (30%), Positives = 112/233 (48%)
Query: 29 PD-TILSCSRDNTLI-IWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDK 86
PD +L+ ++ LI IW L+ T + K L+GH I + DG+ +SGS D+
Sbjct: 265 PDGKLLATGAEDKLIRIWDLS---TKRII--KILRGHEQDIYSLDFFPDGDRLVSGSGDR 319
Query: 87 TLRLWDLAAGKT--TRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIV 144
++R+WDL + T ED V +VA S D + I + S D+T+++W++ +
Sbjct: 320 SVRIWDLRTSQCSLTLSIED---GVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERL 376
Query: 145 E------DGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLK-----INHSGHT 193
+ +GH D V V FS N + I S DR VK+W+L K + + GH
Sbjct: 377 DSGNENGNGHEDSVYSVAFSNNGEQ--IASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHK 434
Query: 194 GYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPN 245
++ +V +PD SG KD + WD G L L H + + ++ S N
Sbjct: 435 DFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNPLLMLQGHRNSVISVAVSLN 487
Score = 201 (75.8 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 59/210 (28%), Positives = 97/210 (46%)
Query: 109 VLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVS 168
+ SV FS D + + + + DK I++W+ L+ + + GH + + F P+ +VS
Sbjct: 258 IRSVCFSPDGKLLATGAEDKLIRIWD-LSTKRIIKILRGHEQDIYSLDFFPDGDR--LVS 314
Query: 169 AGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHL 228
DR V++W+L + + S G + TV VSPDG L A+G D +WD G +
Sbjct: 315 GSGDRSVRIWDLRTSQCSLTLSIEDG-VTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLV 373
Query: 229 HTLV--------HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFS 280
L H D + ++ FS N Q + RT++ +L E +
Sbjct: 374 ERLDSGNENGNGHEDSVYSVAFS-NNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIG 432
Query: 281 LFRDVLSVAFSVDNRQIVSSSRDKTIKLWN 310
VLSV + DN I+S S+D+ + W+
Sbjct: 433 HKDFVLSVCCTPDNEYILSGSKDRGVIFWD 462
Score = 165 (63.1 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 55/225 (24%), Positives = 107/225 (47%)
Query: 104 DHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN-TLAHCKFTIVEDGHSD------------ 150
DH+ V V FS D + +++ +KT +++N T ++++ ++
Sbjct: 198 DHSSVVCCVRFSRDGK-FIATGCNKTTQVFNVTTGELVAKLIDESSNENKDDNTTASGDL 256
Query: 151 WVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKL-KINHSGHTGYLNTVTVSPDGSLCA 209
++ V FSP+ + ++ + D+++++W+L+ ++ KI GH + ++ PDG
Sbjct: 257 YIRSVCFSPDGK--LLATGAEDKLIRIWDLSTKRIIKILR-GHEQDIYSLDFFPDGDRLV 313
Query: 210 SGGKDMNAMLWDLNDGKHLHTLVHNDIITALCFSPNRSFQKIKLDISRTLQ----KSNLI 265
SG D + +WDL + TL D +T + SP+ + RT++ + +
Sbjct: 314 SGSGDRSVRIWDLRTSQCSLTLSIEDGVTTVAVSPDGKLIAAG-SLDRTVRVWDSTTGFL 372
Query: 266 LYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWN 310
+ ++ G V SVAFS + QI S S D+T+KLW+
Sbjct: 373 VERLDSGNENGNGHE--DSVYSVAFSNNGEQIASGSLDRTVKLWH 415
Score = 159 (61.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 64/241 (26%), Positives = 117/241 (48%)
Query: 148 HSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKL--KI-------NHSGHT---G- 194
HS V CVRFS + + ++ G ++ +V+N+T +L K+ N +T G
Sbjct: 199 HSSVVCCVRFSRDGK---FIATGCNKTTQVFNVTTGELVAKLIDESSNENKDDNTTASGD 255
Query: 195 -YLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIK 252
Y+ +V SPDG L A+G +D +WDL+ + + L H I +L F P+ +
Sbjct: 256 LYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGD----R 311
Query: 253 LDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTL 312
L +S + +S + ++ + + S+ V +VA S D + I + S D+T+++W
Sbjct: 312 L-VSGSGDRS-VRIWDLRTSQCSLTL-SIEDGVTTVAVSPDGKLIAAGSLDRTVRVW--- 365
Query: 313 AHCKFTIVDLETKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQ 372
D T +VE L D +++ S+A+S +G+ + +G D T+++W
Sbjct: 366 --------DSTTGFLVERL--DSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWH 415
Query: 373 V 373
+
Sbjct: 416 L 416
Score = 137 (53.3 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 35/125 (28%), Positives = 56/125 (44%)
Query: 13 NGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVL 72
NGH V +A + + I S S D T+ +W L + GH F+ +
Sbjct: 384 NGHEDSVYSVAFSNN-GEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCC 442
Query: 73 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ----IVSSSRDK 128
+ D Y LSGS D+ + WD A+G + H V+SVA S++++ + S D
Sbjct: 443 TPDNEYILSGSKDRGVIFWDQASGNPLLMLQGHRNSVISVAVSLNSKGTEGIFATGSGDC 502
Query: 129 TIKLW 133
++W
Sbjct: 503 KARIW 507
>DICTYBASE|DDB_G0279507 [details] [associations]
symbol:plrg1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0279507 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005681 EMBL:AAFI02000031 GO:GO:0000398
KO:K12862 OMA:ITAEADK RefSeq:XP_641668.1 ProteinModelPortal:Q54WP9
STRING:Q54WP9 EnsemblProtists:DDB0233530 GeneID:8622076
KEGG:ddi:DDB_G0279507 InParanoid:Q54WP9 Uniprot:Q54WP9
Length = 516
Score = 229 (85.7 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 79/313 (25%), Positives = 128/313 (40%)
Query: 7 QLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHF 66
+L ++GH GWV IA + K + + S DNT+ +W L G + L GH
Sbjct: 198 KLMRVISGHTGWVRAIAVD-KSNEWFATGSTDNTIKVWDLAS-----GELKVTLTGHVSA 251
Query: 67 ISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSR 126
I + +SS Y S D + WDL + K R + H + V SVA + S R
Sbjct: 252 IRGLEVSSRHPYLFSVGEDNKVLCWDLESNKQVRNYYGHRQGVYSVALHPTLDVLFSGGR 311
Query: 127 DKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLK 186
D +++W+ ++ GH + ++ S N +P ++S D VK+W+L
Sbjct: 312 DNCVRVWDMRTRANIFEMK-GHKGTILSLK-SQN-ADPQVISGSMDTTVKLWDLATGTSA 368
Query: 187 INHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSP- 244
+ H + ++ + A+G D N W DG + L HN II A+ +
Sbjct: 369 ATLTNHKKGVRSMVIHEKEYSFATGAAD-NIKQWKCPDGSFIKNLSGHNSIINAMALNAD 427
Query: 245 --------NRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQ 296
N S QK+ I+ P G +E + +AF +
Sbjct: 428 NVLVSGGDNGSISFWDWKTGYCFQKTQSIVQP---GSLEGE-----AGIFDMAFDKTGSR 479
Query: 297 IVSSSRDKTIKLW 309
+++ DKTIK +
Sbjct: 480 LITCEADKTIKFY 492
Score = 135 (52.6 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 44/199 (22%), Positives = 82/199 (41%)
Query: 116 VDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMV 175
++NR +++ T K V GH+ WV + + + N + D +
Sbjct: 174 INNRTLINQYEPLTYTKPEWHPPWKLMRVISGHTGWVRAI--AVDKSNEWFATGSTDNTI 231
Query: 176 KVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HN 234
KVW+L + +LK+ +GH + + VS S G+D + WDL K + H
Sbjct: 232 KVWDLASGELKVTLTGHVSAIRGLEVSSRHPYLFSVGEDNKVLCWDLESNKQVRNYYGHR 291
Query: 235 DIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRD---VLSVAFS 291
+ ++ P LD+ + + N + + + F + +LS+
Sbjct: 292 QGVYSVALHPT-------LDVLFSGGRDNCVR--VWDMRTRANIFEMKGHKGTILSLKSQ 342
Query: 292 VDNRQIVSSSRDKTIKLWN 310
+ Q++S S D T+KLW+
Sbjct: 343 NADPQVISGSMDTTVKLWD 361
>MGI|MGI:95785 [details] [associations]
symbol:Gnb3 "guanine nucleotide binding protein (G protein),
beta 3" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0043005 "neuron projection" evidence=ISO] [GO:0044297 "cell
body" evidence=ISO] [GO:0051020 "GTPase binding" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95785 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
EMBL:AC002397 PRINTS:PR00319 GO:GO:0005834
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784
KO:K07825 OMA:NMCSIYS OrthoDB:EOG4J118C EMBL:AK014789 EMBL:BC018239
EMBL:U38494 IPI:IPI00116938 RefSeq:NP_038558.1 UniGene:Mm.68889
ProteinModelPortal:Q61011 SMR:Q61011 STRING:Q61011
PhosphoSite:Q61011 PaxDb:Q61011 PRIDE:Q61011
Ensembl:ENSMUST00000024206 GeneID:14695 KEGG:mmu:14695
InParanoid:Q61011 NextBio:286643 Bgee:Q61011 Genevestigator:Q61011
GermOnline:ENSMUSG00000023439 Uniprot:Q61011
Length = 340
Score = 212 (79.7 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 66/262 (25%), Positives = 115/262 (43%)
Query: 57 QKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 116
++ L+GH I + ++D +S S D L +WD + V++ A++
Sbjct: 48 RRTLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAP 107
Query: 117 DNRQIVSSSRDKTIKLWNTLA---HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDR 173
+ D ++N + + K + H+ ++SC RF + N I+ S+G D
Sbjct: 108 SGNFVACGGLDNMCSIYNLKSREGNVKVSRELSAHTGYLSCCRFLDD--NNIVTSSG-DT 164
Query: 174 MVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV- 232
+W++ + K GHTG ++ VSPD L SG D +A LWD+ +G T
Sbjct: 165 TCALWDIETGQQKTVFVGHTGDCMSLAVSPDYKLFISGACDASAKLWDVREGTCRQTFTG 224
Query: 233 HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFF--SLFRDVLSVAF 290
H I A+CF PN I ++ L+ + + T + S+ + SVAF
Sbjct: 225 HESDINAICFFPNGEA------ICTGSDDASCRLFDLRADQELTAYSQESIICGITSVAF 278
Query: 291 SVDNRQIVSSSRDKTIKLWNTL 312
S+ R + + D +W++L
Sbjct: 279 SLSGRLLFAGYDDFNCNVWDSL 300
Score = 196 (74.1 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 62/247 (25%), Positives = 111/247 (44%)
Query: 6 LQLRGTLNGHNGWVTQI--ATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGH 63
++ R TL GH + + AT+ K ++S S+D LI+W + + +P +
Sbjct: 45 MRTRRTLRGHLAKIYAMHWATDSKL---LVSASQDGKLIVWDTYTTNKVHAIPLR----- 96
Query: 64 SHFISDIVLSSDGNYALSGSWDKTLRLWDLAA--G--KTTRRFEDHTKDVLSVAFSVDNR 119
S ++ + GN+ G D +++L + G K +R HT LS +D+
Sbjct: 97 SSWVMTCAYAPSGNFVACGGLDNMCSIYNLKSREGNVKVSRELSAHT-GYLSCCRFLDDN 155
Query: 120 QIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
IV+SS D T LW+ + T+ GH+ + SP+++ + +S D K+W+
Sbjct: 156 NIVTSSGDTTCALWDIETGQQKTVFV-GHTGDCMSLAVSPDYK--LFISGACDASAKLWD 212
Query: 180 LTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDII-- 237
+ + +GH +N + P+G +G D + L+DL + L II
Sbjct: 213 VREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTAYSQESIICG 272
Query: 238 -TALCFS 243
T++ FS
Sbjct: 273 ITSVAFS 279
Score = 184 (69.8 bits), Expect = 5.8e-15, Sum P(2) = 5.8e-15
Identities = 58/233 (24%), Positives = 100/233 (42%)
Query: 97 KTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVR 156
+T R H + ++ ++ D++ +VS+S+D + +W+T K + S WV
Sbjct: 46 RTRRTLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPL-RSSWVMTCA 104
Query: 157 FSPNHQNPIIVSAGWDRMVKVWNLT----NCKLKINHSGHTGYLNTVTVSPDGSLCASGG 212
++P+ + G D M ++NL N K+ S HTGYL+ D ++ S G
Sbjct: 105 YAPSGN--FVACGGLDNMCSIYNLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSG 162
Query: 213 KDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINH 271
D LWD+ G+ V H +L SP+ KL IS S L+ +
Sbjct: 163 -DTTCALWDIETGQQKTVFVGHTGDCMSLAVSPD-----YKLFISGACDASAK-LWDVRE 215
Query: 272 GKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLET 324
G F D+ ++ F + I + S D + +L++ A + T E+
Sbjct: 216 GTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTAYSQES 268
Score = 177 (67.4 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 57/210 (27%), Positives = 92/210 (43%)
Query: 16 NGWVTQIATNPKFPDTILSCSR-DNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSS 74
+ WV A P ++C DN I+ L + N V + L H+ ++S
Sbjct: 97 SSWVMTCAYAPS--GNFVACGGLDNMCSIYNLKSREGNVKV-SRELSAHTGYLSCCRFLD 153
Query: 75 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 134
D N S S D T LWD+ G+ F HT D +S+A S D + +S + D + KLW+
Sbjct: 154 DNNIVTS-SGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDYKLFISGACDASAKLWD 212
Query: 135 TL-AHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHT 193
C+ T GH ++ + F PN + I + D ++++L + +S +
Sbjct: 213 VREGTCRQTFT--GHESDINAICFFPNGE--AICTGSDDASCRLFDLRADQELTAYSQES 268
Query: 194 GY--LNTVTVSPDGSLCASGGKDMNAMLWD 221
+ +V S G L +G D N +WD
Sbjct: 269 IICGITSVAFSLSGRLLFAGYDDFNCNVWD 298
Score = 166 (63.5 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 52/214 (24%), Positives = 98/214 (45%)
Query: 12 LNGHNGWVTQIATNPKFPD--TILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISD 69
L+ H G+++ +F D I++ S D T +W D G + GH+
Sbjct: 139 LSAHTGYLSCC----RFLDDNNIVTSSGDTTCALW-----DIETGQQKTVFVGHTGDCMS 189
Query: 70 IVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKT 129
+ +S D +SG+ D + +LWD+ G + F H D+ ++ F + I + S D +
Sbjct: 190 LAVSPDYKLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDAS 249
Query: 130 IKLWNTLAHCKFTIV-EDGHSDWVSCVRFSPNHQNPIIVSAGWDRM-VKVWNLTNCKLKI 187
+L++ A + T ++ ++ V FS + + ++ AG+D VW+ C+
Sbjct: 250 CRLFDLRADQELTAYSQESIICGITSVAFSLSGR---LLFAGYDDFNCNVWDSLKCERVG 306
Query: 188 NHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWD 221
SGH ++ + V+ DG A+G D +W+
Sbjct: 307 ILSGHDNRVSCLGVTADGMAVATGSWDSFLKIWN 340
Score = 165 (63.1 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 46/178 (25%), Positives = 81/178 (45%)
Query: 4 ETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGH 63
ET Q + GH G +A +P + +S + D + +W D G ++ GH
Sbjct: 172 ETGQQKTVFVGHTGDCMSLAVSPDYK-LFISGACDASAKLW-----DVREGTCRQTFTGH 225
Query: 64 SHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK--DVLSVAFSVDNRQI 121
I+ I +G +GS D + RL+DL A + + + + SVAFS+ R +
Sbjct: 226 ESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTAYSQESIICGITSVAFSLSGRLL 285
Query: 122 VSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
+ D +W++L C+ + GH + VSC+ + + + + WD +K+WN
Sbjct: 286 FAGYDDFNCNVWDSLK-CERVGILSGHDNRVSCLGVTADGM--AVATGSWDSFLKIWN 340
Score = 67 (28.6 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 18/53 (33%), Positives = 25/53 (47%)
Query: 330 ELRPDVVSQSTKADPPMC--LSLAWSTDGQTLFAGYSDNTIRVWQVSVTSRGG 380
+LR D + + +C S+A+S G+ LFAGY D VW R G
Sbjct: 254 DLRADQELTAYSQESIICGITSVAFSLSGRLLFAGYDDFNCNVWDSLKCERVG 306
Score = 41 (19.5 bits), Expect = 8.6e-14, Sum P(2) = 8.6e-14
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 285 VLSVAFSVDNRQIVSSSRDKTIKLWN 310
V + + D + + S D +K+WN
Sbjct: 315 VSCLGVTADGMAVATGSWDSFLKIWN 340
Score = 39 (18.8 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 347 CLSLAWSTDGQTLFAGYSDNTIRVW 371
CL + + DG + G D+ +++W
Sbjct: 317 CLGV--TADGMAVATGSWDSFLKIW 339
>SGD|S000006072 [details] [associations]
symbol:PRP46 "Member of the NineTeen Complex (NTC)"
species:4932 "Saccharomyces cerevisiae" [GO:0005681 "spliceosomal
complex" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IMP] [GO:0000974 "Prp19 complex"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000006072 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681 GO:GO:0007049
EMBL:BK006949 EMBL:X96770 GO:GO:0000398 GO:GO:0000974
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595 KO:K12862
OMA:ITAEADK OrthoDB:EOG4QZBVP EMBL:Z73507 PIR:S65162
RefSeq:NP_015174.1 ProteinModelPortal:Q12417 SMR:Q12417
DIP:DIP-3994N IntAct:Q12417 MINT:MINT-389419 STRING:Q12417
COMPLUYEAST-2DPAGE:Q12417 PaxDb:Q12417 PeptideAtlas:Q12417
EnsemblFungi:YPL151C GeneID:855952 KEGG:sce:YPL151C CYGD:YPL151c
NextBio:980735 Genevestigator:Q12417 GermOnline:YPL151C
Uniprot:Q12417
Length = 451
Score = 216 (81.1 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 55/178 (30%), Positives = 83/178 (46%)
Query: 60 LKGHSHFISDIVLSS-DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN 118
+ GH ++ + + D + ++GS D T+++WDLA GK H V VA S +
Sbjct: 135 INGHLGWVRCVAIDPVDNEWFITGSNDTTMKVWDLATGKLKTTLAGHVMTVRDVAVSDRH 194
Query: 119 RQIVSSSRDKTIKLWNTLAHCKFTIVED--GHSDWVSCVRFSPNHQNPIIVSAGWDRMVK 176
+ S S DKT+K W+ K I+ D GH V V P +I +AG D ++K
Sbjct: 195 PYLFSVSEDKTVKCWDLE---KNQIIRDYYGHLSGVRTVSIHPTLD--LIATAGRDSVIK 249
Query: 177 VWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHN 234
+W++ I GH G +N V +P S D LWD+ GK + L H+
Sbjct: 250 LWDMRTRIPVITLVGHKGPINQVQCTPVDPQVVSSSTDATVRLWDVVAGKTMKVLTHH 307
Score = 215 (80.7 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 64/225 (28%), Positives = 104/225 (46%)
Query: 7 QLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHF 66
+L +NGH GWV +A +P + ++ S D T+ +W L G + L GH
Sbjct: 130 KLSRVINGHLGWVRCVAIDPVDNEWFITGSNDTTMKVWDLAT-----GKLKTTLAGHVMT 184
Query: 67 ISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSR 126
+ D+ +S Y S S DKT++ WDL + R + H V +V+ I ++ R
Sbjct: 185 VRDVAVSDRHPYLFSVSEDKTVKCWDLEKNQIIRDYYGHLSGVRTVSIHPTLDLIATAGR 244
Query: 127 DKTIKLWNTLAHCK-FTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCK- 184
D IKLW+ T+V GH ++ V+ +P +P +VS+ D V++W++ K
Sbjct: 245 DSVIKLWDMRTRIPVITLV--GHKGPINQVQCTP--VDPQVVSSSTDATVRLWDVVAGKT 300
Query: 185 LKI-NHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHL 228
+K+ H H + + P AS D + W L +G L
Sbjct: 301 MKVLTH--HKRSVRATALHPKEFSVASACTD-DIRSWGLAEGSLL 342
Score = 167 (63.8 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 57/237 (24%), Positives = 101/237 (42%)
Query: 5 TLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHS 64
T +L+ TL GH V +A + + P + S S D T+ W L ++ + GH
Sbjct: 171 TGKLKTTLAGHVMTVRDVAVSDRHP-YLFSVSEDKTVKCWDLEKNQII-----RDYYGHL 224
Query: 65 HFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSS 124
+ + + + + D ++LWD+ H + V + + Q+VSS
Sbjct: 225 SGVRTVSIHPTLDLIATAGRDSVIKLWDMRTRIPVITLVGHKGPINQVQCTPVDPQVVSS 284
Query: 125 SRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCK 184
S D T++LW+ +A ++ H V P + + SA D ++ W L
Sbjct: 285 STDATVRLWDVVAGKTMKVLTH-HKRSVRATALHPKEFS--VASACTDD-IRSWGLAEGS 340
Query: 185 LKIN-HSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITAL 240
L N S TG +NT++++ D L A GG + +D G +L +++ +L
Sbjct: 341 LLTNFESEKTGIINTLSINQDDVLFA-GGDNGVLSFYDYKSGHKYQSLATREMVGSL 396
Score = 142 (55.0 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 50/186 (26%), Positives = 80/186 (43%)
Query: 133 WNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGH 192
W+ A K + V +GH WV CV P N ++ D +KVW+L KLK +GH
Sbjct: 125 WH--APWKLSRVINGHLGWVRCVAIDPV-DNEWFITGSNDTTMKVWDLATGKLKTTLAGH 181
Query: 193 TGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKI 251
+ V VS S +D WDL + + H + + P
Sbjct: 182 VMTVRDVAVSDRHPYLFSVSEDKTVKCWDLEKNQIIRDYYGHLSGVRTVSIHPT------ 235
Query: 252 KLDISRTLQKSNLI-LYPINHGKMETPFFSLFRD---VLSVAFSVDNRQIVSSSRDKTIK 307
LD+ T + ++I L+ + + P +L + V + + Q+VSSS D T++
Sbjct: 236 -LDLIATAGRDSVIKLWDM---RTRIPVITLVGHKGPINQVQCTPVDPQVVSSSTDATVR 291
Query: 308 LWNTLA 313
LW+ +A
Sbjct: 292 LWDVVA 297
Score = 51 (23.0 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 283 RDVLSVAFSVDNRQIVSSSRDKTIKLW 309
R VL F ++++ DK+IK+W
Sbjct: 400 RSVLCSTFDKTGLRLITGEADKSIKIW 426
Score = 42 (19.8 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 356 GQTLFAGYSDNTIRVWQVSVTS 377
G L G +D +I++W+ T+
Sbjct: 411 GLRLITGEADKSIKIWKQDETA 432
>UNIPROTKB|F1NNQ9 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0071001 "U4/U6 snRNP" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AADN02026938
EMBL:AADN02026937 IPI:IPI00576508 Ensembl:ENSGALT00000014388
Uniprot:F1NNQ9
Length = 521
Score = 229 (85.7 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 61/212 (28%), Positives = 100/212 (47%)
Query: 12 LNGHNGWVTQIATNP--KFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISD 69
+ GH+ V ++ +P +F T +C D++ +W L + +GHS + D
Sbjct: 318 IEGHSMRVARVMWHPSGRFLGT--TCY-DHSWRLWDLEAQEEIL-----HQEGHSKGVYD 369
Query: 70 IVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKT 129
I +DG+ A +G D R+WDL G+ E H K++ + FS + + + S D T
Sbjct: 370 IAFHTDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGLNFSPNGYHVATGSGDNT 429
Query: 130 IKLWNTLAH-CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKIN 188
K+W+ C +TI H + V+ V+F PNH N ++ A +D K+W
Sbjct: 430 CKVWDLRQRKCIYTI--PAHQNLVTGVKFEPNHGNFLLTGA-YDNTAKIWTHPGWSPLKT 486
Query: 189 HSGHTGYLNTVTVSPDGSLCASGGKDMNAMLW 220
+GH G + + +S DG L A+ D LW
Sbjct: 487 LAGHEGKVMGLDISLDGQLIATCSYDRTFKLW 518
Score = 197 (74.4 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 64/242 (26%), Positives = 104/242 (42%)
Query: 11 TLNGHNGWVTQIATNPKFP---D----TILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGH 63
TL GH+ V I +PK D + SC+ D ++ +W L D+ P ++GH
Sbjct: 267 TLRGHSTNVGAIVFHPKATVSLDKKDVNLASCAADGSVKLWSLESDE-----PVADIEGH 321
Query: 64 SHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 123
S ++ ++ G + + +D + RLWDL A + E H+K V +AF D +
Sbjct: 322 SMRVARVMWHPSGRFLGTTCYDHSWRLWDLEAQEEILHQEGHSKGVYDIAFHTDGSLAGT 381
Query: 124 SSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNC 183
D ++W+ L + + +GH + + FSPN + + +G D KVW+L
Sbjct: 382 GGLDAFGRVWD-LRTGRCIMFLEGHLKEIYGLNFSPNGYH-VATGSG-DNTCKVWDLRQR 438
Query: 184 KLKINHSGHTGYLNTVTVSPD-GSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALC 241
K H + V P+ G+ +G D A +W L TL H + L
Sbjct: 439 KCIYTIPAHQNLVTGVKFEPNHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLD 498
Query: 242 FS 243
S
Sbjct: 499 IS 500
Score = 185 (70.2 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 62/259 (23%), Positives = 115/259 (44%)
Query: 60 LKGHSHFISDIVLSSDGNYAL--------SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 111
L+GHS + IV +L S + D +++LW L + + E H+ V
Sbjct: 268 LRGHSTNVGAIVFHPKATVSLDKKDVNLASCAADGSVKLWSLESDEPVADIEGHSMRVAR 327
Query: 112 VAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGW 171
V + R + ++ D + +LW+ A + + ++GHS V + F + + + G
Sbjct: 328 VMWHPSGRFLGTTCYDHSWRLWDLEAQEEI-LHQEGHSKGVYDIAFHTD--GSLAGTGGL 384
Query: 172 DRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTL 231
D +VW+L + + GH + + SP+G A+G D +WDL K ++T+
Sbjct: 385 DAFGRVWDLRTGRCIMFLEGHLKEIYGLNFSPNGYHVATGSGDNTCKVWDLRQRKCIYTI 444
Query: 232 -VHNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAF 290
H +++T + F PN + T + + +P ++T V+ +
Sbjct: 445 PAHQNLVTGVKFEPNHGNFLLTGAYDNT---AKIWTHP-GWSPLKT-LAGHEGKVMGLDI 499
Query: 291 SVDNRQIVSSSRDKTIKLW 309
S+D + I + S D+T KLW
Sbjct: 500 SLDGQLIATCSYDRTFKLW 518
Score = 149 (57.5 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 45/182 (24%), Positives = 82/182 (45%)
Query: 73 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF------SVDNRQI--VSS 124
S + + W +LW + H+ +V ++ F S+D + + S
Sbjct: 239 SPNSKLLATACWSGLCKLWSVPDCNLVHTLRGHSTNVGAIVFHPKATVSLDKKDVNLASC 298
Query: 125 SRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCK 184
+ D ++KLW+ + +E GHS V+ V + P+ + + + +D ++W+L +
Sbjct: 299 AADGSVKLWSLESDEPVADIE-GHSMRVARVMWHPSGR--FLGTTCYDHSWRLWDLEAQE 355
Query: 185 LKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFS 243
++ GH+ + + DGSL +GG D +WDL G+ + L H I L FS
Sbjct: 356 EILHQEGHSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGLNFS 415
Query: 244 PN 245
PN
Sbjct: 416 PN 417
Score = 47 (21.6 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 350 LAWSTDGQTLFAGYSDNTIRVWQV 373
L +S +G + G DNT +VW +
Sbjct: 412 LNFSPNGYHVATGSGDNTCKVWDL 435
Score = 42 (19.8 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 356 GQTLFAGYSDNTIRVW 371
G L G DNT ++W
Sbjct: 461 GNFLLTGAYDNTAKIW 476
Score = 38 (18.4 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 348 LSLAWSTDGQTLFAGYSDNTIRVW 371
+ L S DGQ + D T ++W
Sbjct: 495 MGLDISLDGQLIATCSYDRTFKLW 518
>UNIPROTKB|Q9HAV0 [details] [associations]
symbol:GNB4 "Guanine nucleotide-binding protein subunit
beta-4" species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0006112 "energy reserve metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006112 GO:GO:0004871
GO:GO:0071377 PRINTS:PR00319 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 HPA:HPA040736 EMBL:AF300648 EMBL:AK001890
EMBL:BC000873 IPI:IPI00012451 RefSeq:NP_067642.1 UniGene:Hs.173030
ProteinModelPortal:Q9HAV0 SMR:Q9HAV0 IntAct:Q9HAV0
MINT:MINT-1135986 STRING:Q9HAV0 PhosphoSite:Q9HAV0 DMDM:22256759
OGP:Q9HAV0 PeptideAtlas:Q9HAV0 PRIDE:Q9HAV0 DNASU:59345
Ensembl:ENST00000232564 Ensembl:ENST00000468623 GeneID:59345
KEGG:hsa:59345 UCSC:uc003fjv.4 CTD:59345 GeneCards:GC03M179113
HGNC:HGNC:20731 HPA:CAB018383 HPA:CAB018737 MIM:610863
neXtProt:NX_Q9HAV0 PharmGKB:PA134864200 InParanoid:Q9HAV0 KO:K04538
OMA:GACDATS PhylomeDB:Q9HAV0 GenomeRNAi:59345 NextBio:65246
ArrayExpress:Q9HAV0 Bgee:Q9HAV0 CleanEx:HS_GNB4
Genevestigator:Q9HAV0 GermOnline:ENSG00000114450 Uniprot:Q9HAV0
Length = 340
Score = 216 (81.1 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 77/310 (24%), Positives = 132/310 (42%)
Query: 6 LQLRGTLNGHNGWVTQIATNPKFPDTIL-SCSRDNTLIIWKLTRDDTNYGVPQKRLKGHS 64
++ R TL GH + A + + +L S S+D LIIW + + +P + S
Sbjct: 45 MRTRRTLRGHLAKI--YAMHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLR-----S 97
Query: 65 HFISDIVLSSDGNYALSGSWDKTLRLWDLAA--G--KTTRRFEDHTKDVLSVAFSVDNRQ 120
++ + GNY G D +++L G + +R HT LS +D+ Q
Sbjct: 98 SWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELPGHT-GYLSCCRFLDDSQ 156
Query: 121 IVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL 180
IV+SS D T LW+ + + T GHS V + SP+ + VS D K+W++
Sbjct: 157 IVTSSGDTTCALWD-IETAQQTTTFTGHSGDVMSLSLSPDMRT--FVSGACDASSKLWDI 213
Query: 181 TNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITAL 240
+ + + +GH +N V+ P+G A+G D L+DL + L H++II
Sbjct: 214 RDGMCRQSFTGHVSDINAVSFFPNGYAFATGSDDATCRLFDLRADQELLLYSHDNII--- 270
Query: 241 CFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSS 300
C + +F K + N ++ G V + + D + +
Sbjct: 271 CGITSVAFSKSGRLLLAGYDDFNCNVWDTLKGDRAGVLAGHDNRVSCLGVTDDGMAVATG 330
Query: 301 SRDKTIKLWN 310
S D +++WN
Sbjct: 331 SWDSFLRIWN 340
Score = 193 (73.0 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 73/296 (24%), Positives = 129/296 (43%)
Query: 30 DTILSCSRDNTLIIWKLTRDDTNYGVPQKR----LKGHSHFISDIVLSSDGNYALSGSWD 85
D +C+ D TL+ ++T + + G Q R L+GH I + D +S S D
Sbjct: 20 DARKACN-DATLV--QITSNMDSVGRIQMRTRRTLRGHLAKIYAMHWGYDSRLLVSASQD 76
Query: 86 KTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA---HCKFT 142
L +WD + V++ A++ + D ++N + + +
Sbjct: 77 GKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVS 136
Query: 143 IVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVS 202
GH+ ++SC RF + Q I+ S+G D +W++ + +GH+G + ++++S
Sbjct: 137 RELPGHTGYLSCCRFLDDSQ--IVTSSG-DTTCALWDIETAQQTTTFTGHSGDVMSLSLS 193
Query: 203 PDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNR-SFQKIKLDISRTL- 259
PD SG D ++ LWD+ DG + H I A+ F PN +F D + L
Sbjct: 194 PDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYAFATGSDDATCRLF 253
Query: 260 ---QKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTL 312
L+LY +H ++ + SVAFS R +++ D +W+TL
Sbjct: 254 DLRADQELLLY--SHD-------NIICGITSVAFSKSGRLLLAGYDDFNCNVWDTL 300
Score = 173 (66.0 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 54/223 (24%), Positives = 95/223 (42%)
Query: 97 KTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVR 156
+T R H + ++ + D+R +VS+S+D + +W++ K + S WV
Sbjct: 46 RTRRTLRGHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPL-RSSWVMTCA 104
Query: 157 FSPNHQNPIIVSAGWDRMVKVWNLT----NCKLKINHSGHTGYLNTVTVSPDGSLCASGG 212
++P+ + G D + ++NL N ++ GHTGYL+ D + S G
Sbjct: 105 YAPSGN--YVACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSG 162
Query: 213 KDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPN-RSFQKIKLDISRTLQKSNLILYPIN 270
D LWD+ + T H+ + +L SP+ R+F D S L + I
Sbjct: 163 -DTTCALWDIETAQQTTTFTGHSGDVMSLSLSPDMRTFVSGACDASSKL-------WDIR 214
Query: 271 HGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA 313
G F D+ +V+F + + S D T +L++ A
Sbjct: 215 DGMCRQSFTGHVSDINAVSFFPNGYAFATGSDDATCRLFDLRA 257
Score = 163 (62.4 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 49/179 (27%), Positives = 86/179 (48%)
Query: 4 ETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGH 63
ET Q T GH+G V ++ +P T +S + D + +W + RD G+ ++ GH
Sbjct: 172 ETAQQTTTFTGHSGDVMSLSLSPDMR-TFVSGACDASSKLWDI-RD----GMCRQSFTGH 225
Query: 64 SHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK---DVLSVAFSVDNRQ 120
I+ + +G +GS D T RL+DL A + + H + SVAFS R
Sbjct: 226 VSDINAVSFFPNGYAFATGSDDATCRLFDLRADQELLLYS-HDNIICGITSVAFSKSGRL 284
Query: 121 IVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
+++ D +W+TL + ++ GH + VSC+ + + + + WD +++WN
Sbjct: 285 LLAGYDDFNCNVWDTLKGDRAGVLA-GHDNRVSCLGVTDDGM--AVATGSWDSFLRIWN 340
Score = 63 (27.2 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 18/53 (33%), Positives = 23/53 (43%)
Query: 330 ELRPDVVSQSTKADPPMC--LSLAWSTDGQTLFAGYSDNTIRVWQVSVTSRGG 380
+LR D D +C S+A+S G+ L AGY D VW R G
Sbjct: 254 DLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKGDRAG 306
Score = 41 (19.5 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 347 CLSLAWSTDGQTLFAGYSDNTIRVW 371
CL + + DG + G D+ +R+W
Sbjct: 317 CLGV--TDDGMAVATGSWDSFLRIW 339
>DICTYBASE|DDB_G0278285 [details] [associations]
symbol:copB2 "coatomer protein complex beta 2 subunit
(beta prime)" species:44689 "Dictyostelium discoideum" [GO:0030117
"membrane coat" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0278285 GO:GO:0006886 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GenomeReviews:CM000152_GR GO:GO:0005198 EMBL:AAFI02000023
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030126
HSSP:P63005 InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG
RefSeq:XP_642264.1 ProteinModelPortal:Q54YD8 STRING:Q54YD8
EnsemblProtists:DDB0233798 GeneID:8621473 KEGG:ddi:DDB_G0278285
ProtClustDB:CLSZ2729111 Uniprot:Q54YD8
Length = 1005
Score = 230 (86.0 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 57/188 (30%), Positives = 96/188 (51%)
Query: 44 WKLT-RDDT-----NYGVPQK--RLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAA 95
W +T DDT NY +K + H+ +I I++ Y LS S D ++LWD
Sbjct: 72 WIVTGSDDTYIRVYNYNTMEKIKSFEAHADYIRCIIVHPTLPYILSSSDDMFIKLWDYEK 131
Query: 96 G-KTTRRFEDHTKDVLSVAFSV-DNRQIVSSSRDKTIKLWNTLA-HCKFTIVEDGHSDWV 152
G T+ FE H+ V+S+A++ D Q ++S DKT+K+W+ + H FT+ +GH +
Sbjct: 132 GWSNTQVFEGHSHYVMSIAWNPKDTNQFATASLDKTVKVWSINSPHPHFTL--EGHEKGI 189
Query: 153 SCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGG 212
+ V + + P ++S D++VK+W+ + GH+ ++ V P+ L SG
Sbjct: 190 NSVEYFSGGEKPYLISGADDKLVKIWDYQSKTCVQTLEGHSNNVSVVCYHPELPLILSGS 249
Query: 213 KDMNAMLW 220
+D LW
Sbjct: 250 EDGTVKLW 257
Score = 196 (74.1 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 68/246 (27%), Positives = 120/246 (48%)
Query: 5 TLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHS 64
T++ + H ++ I +P P ILS S D + +W + +N V +GHS
Sbjct: 89 TMEKIKSFEAHADYIRCIIVHPTLP-YILSSSDDMFIKLWDYEKGWSNTQV----FEGHS 143
Query: 65 HFISDIVLS-SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA-FSVDNRQ-I 121
H++ I + D N + S DKT+++W + + E H K + SV FS + +
Sbjct: 144 HYVMSIAWNPKDTNQFATASLDKTVKVWSINSPHPHFTLEGHEKGINSVEYFSGGEKPYL 203
Query: 122 VSSSRDKTIKLWNTLAH-CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL 180
+S + DK +K+W+ + C T+ +GHS+ VS V + P + P+I+S D VK+W+
Sbjct: 204 ISGADDKLVKIWDYQSKTCVQTL--EGHSNNVSVVCYHP--ELPLILSGSEDGTVKLWHS 259
Query: 181 TNCKLK--INHS-GHTGYLNTVTVS-------PDGSLCASGGKDMNAMLWDLNDGKHLHT 230
+ +L+ +N+ G +N + S DG++ GK+ + D GK ++
Sbjct: 260 STYRLERTLNYGMGFVWSMNFLRGSNFIGLGYDDGTVVLKIGKNKPPVSMD-QGGKVIYA 318
Query: 231 LVHNDI 236
HN+I
Sbjct: 319 K-HNEI 323
Score = 131 (51.2 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 39/176 (22%), Positives = 77/176 (43%)
Query: 57 QKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 116
+K+L S + + + + L+ +D + +W+ + FE + + A +
Sbjct: 8 KKKLSTRSDRVKSVDIHPTEPWILASLYDGNVYIWNYETQNMVKSFEVSPNNPVRTARFI 67
Query: 117 DNRQ-IVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMV 175
+Q IV+ S D I+++N K E H+D++ C+ P P I+S+ D +
Sbjct: 68 AKKQWIVTGSDDTYIRVYNYNTMEKIKSFE-AHADYIRCIIVHPTL--PYILSSSDDMFI 124
Query: 176 KVWNLTNCKLKIN-HSGHTGYLNTVTVSP-DGSLCASGGKDMNAMLWDLNDGKHLH 229
K+W+ GH+ Y+ ++ +P D + A+ D +W +N H H
Sbjct: 125 KLWDYEKGWSNTQVFEGHSHYVMSIAWNPKDTNQFATASLDKTVKVWSINS-PHPH 179
Score = 47 (21.6 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 297 IVSSSRDKTIKLWNT 311
I+S S D T+KLW++
Sbjct: 245 ILSGSEDGTVKLWHS 259
Score = 37 (18.1 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 5/16 (31%), Positives = 10/16 (62%)
Query: 359 LFAGYSDNTIRVWQVS 374
+ +G D T+++W S
Sbjct: 245 ILSGSEDGTVKLWHSS 260
>UNIPROTKB|J9NS21 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
CTD:317 KO:K02084 InterPro:IPR017251 PIRSF:PIRSF037646
GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
RefSeq:XP_003432082.1 ProteinModelPortal:J9NS21
Ensembl:ENSCAFT00000049144 GeneID:482620 KEGG:cfa:482620
Uniprot:J9NS21
Length = 1250
Score = 234 (87.4 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 68/261 (26%), Positives = 114/261 (43%)
Query: 60 LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 119
++ H+ + S DG S DKTL+++ G+ + H +VL AFS D+R
Sbjct: 612 VRPHTDAVYHACFSEDGQRIASCGVDKTLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDR 671
Query: 120 QIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
I + S DK +K+WN++ V D HS+ V+C F+ N ++ +A D +K+W+
Sbjct: 672 FIATCSVDKKVKIWNSMTG-GLVHVYDEHSEQVNCCHFTNNSHYLLLATASSDCFLKLWD 730
Query: 180 LTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTL-VHNDIIT 238
L + + GHT +N SPD L AS D LWD+ ++ V +
Sbjct: 731 LNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDVKSANERKSINVKQFFLN 790
Query: 239 ALCFSPNRSFQKI------KLDISRTL--QKSNLILYPINHGKMETPFFSLFRDVLSVA- 289
+ P + I D +R + K+ + L+ I+ G + + +
Sbjct: 791 SE--EPQEDMEVIVKCCSWSADGTRIMVAAKNKIFLFDIHTGGLLAEIHTGHHSTIQYCD 848
Query: 290 FSVDNRQIVSSSRDKTIKLWN 310
FS N V + ++LWN
Sbjct: 849 FSPQNHLAVVALSQCCVELWN 869
Score = 181 (68.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 75/310 (24%), Positives = 139/310 (44%)
Query: 32 ILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLW 91
I SC D TL ++K +T G +K H + S+D + + S DK +++W
Sbjct: 631 IASCGVDKTLQVFKA---ET--GEKLLEIKAHEDEVLCCAFSTDDRFIATCSVDKKVKIW 685
Query: 92 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV--SSSRDKTIKLWN-TLAHCKFTIVEDGH 148
+ G +++H++ V F+ ++ ++ ++S D +KLW+ C+ T+ GH
Sbjct: 686 NSMTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASSDCFLKLWDLNQKECRNTMF--GH 743
Query: 149 SDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSL- 207
++ V+ RFSP+ + ++ S D +K+W++ + + + + +LN+ D +
Sbjct: 744 TNSVNHCRFSPDDK--LLASCSADGTLKLWDVKSANERKSINVKQFFLNSEEPQEDMEVI 801
Query: 208 --CASGGKD----MNA-----MLWDLNDG---KHLHTLVHNDIITALCFSPNRSFQKIKL 253
C S D M A L+D++ G +HT H+ I FSP +
Sbjct: 802 VKCCSWSADGTRIMVAAKNKIFLFDIHTGGLLAEIHT-GHHSTIQYCDFSPQNHLAVV-- 858
Query: 254 DISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA 313
L + + L+ ++ V V FS D ++SS D+TI+LW T
Sbjct: 859 ----ALSQCCVELWNMDSCLKVADCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRLWETKK 914
Query: 314 HCKFTIVDLE 323
CK + + L+
Sbjct: 915 VCKNSAIVLK 924
Score = 173 (66.0 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 60/234 (25%), Positives = 103/234 (44%)
Query: 14 GHNGWVTQIATNPKFPD---TILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
GH V I +F D T++S S D+++ +W ++ + L+ H + D
Sbjct: 1002 GHKKTVRHI----QFTDDGKTLISSSDDSSIQVWNWQSEEYVF------LQAHQETVKDF 1051
Query: 71 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 130
L + LS S+D T+++W + G+ + F H VLS S D + S+S DKT
Sbjct: 1052 KLLKNSKL-LSWSFDGTVKIWSIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTA 1110
Query: 131 KLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDR-MVKVWNLTN------C 183
K+W+ + GH V C FS + +++ G D +++WN++N C
Sbjct: 1111 KIWSFELLSPLHELR-GHKGCVRCSVFSVDST---LLATGDDNGEIRIWNVSNGELLHLC 1166
Query: 184 KLKINHSG---HTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHN 234
+ G H G++ + SPD + S G + W++ G+ T N
Sbjct: 1167 APILVEEGAATHGGWVTDLCFSPDSKMLVSAGGYLK--WWNVVTGESSQTFYTN 1218
Score = 156 (60.0 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 54/206 (26%), Positives = 93/206 (45%)
Query: 52 NYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 111
N + Q R+ GH + I + DG +S S D ++++W+ + + + H + V
Sbjct: 993 NNRIFQSRI-GHKKTVRHIQFTDDGKTLISSSDDSSIQVWNWQSEEYVF-LQAHQETVKD 1050
Query: 112 VAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDG--HSDWVSCVRFSPNHQNPIIVSA 169
+ N +++S S D T+K+W+ + I +D H D V SP+ SA
Sbjct: 1051 FKL-LKNSKLLSWSFDGTVKIWSIITG---RIEKDFVCHQDTVLSCDISPDATKFSSTSA 1106
Query: 170 GWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLH 229
D+ K+W+ GH G + S D +L A+G + +W++++G+ LH
Sbjct: 1107 --DKTAKIWSFELLSPLHELRGHKGCVRCSVFSVDSTLLATGDDNGEIRIWNVSNGELLH 1164
Query: 230 T----LV------HNDIITALCFSPN 245
LV H +T LCFSP+
Sbjct: 1165 LCAPILVEEGAATHGGWVTDLCFSPD 1190
>UNIPROTKB|F1Q410 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OMA:KVCKNSA GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
Ensembl:ENSCAFT00000010576 Uniprot:F1Q410
Length = 1258
Score = 234 (87.4 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 68/261 (26%), Positives = 114/261 (43%)
Query: 60 LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 119
++ H+ + S DG S DKTL+++ G+ + H +VL AFS D+R
Sbjct: 619 VRPHTDAVYHACFSEDGQRIASCGVDKTLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDR 678
Query: 120 QIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
I + S DK +K+WN++ V D HS+ V+C F+ N ++ +A D +K+W+
Sbjct: 679 FIATCSVDKKVKIWNSMTG-GLVHVYDEHSEQVNCCHFTNNSHYLLLATASSDCFLKLWD 737
Query: 180 LTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTL-VHNDIIT 238
L + + GHT +N SPD L AS D LWD+ ++ V +
Sbjct: 738 LNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDVKSANERKSINVKQFFLN 797
Query: 239 ALCFSPNRSFQKI------KLDISRTL--QKSNLILYPINHGKMETPFFSLFRDVLSVA- 289
+ P + I D +R + K+ + L+ I+ G + + +
Sbjct: 798 SE--EPQEDMEVIVKCCSWSADGTRIMVAAKNKIFLFDIHTGGLLAEIHTGHHSTIQYCD 855
Query: 290 FSVDNRQIVSSSRDKTIKLWN 310
FS N V + ++LWN
Sbjct: 856 FSPQNHLAVVALSQCCVELWN 876
Score = 181 (68.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 75/310 (24%), Positives = 139/310 (44%)
Query: 32 ILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLW 91
I SC D TL ++K +T G +K H + S+D + + S DK +++W
Sbjct: 638 IASCGVDKTLQVFKA---ET--GEKLLEIKAHEDEVLCCAFSTDDRFIATCSVDKKVKIW 692
Query: 92 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV--SSSRDKTIKLWN-TLAHCKFTIVEDGH 148
+ G +++H++ V F+ ++ ++ ++S D +KLW+ C+ T+ GH
Sbjct: 693 NSMTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASSDCFLKLWDLNQKECRNTMF--GH 750
Query: 149 SDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSL- 207
++ V+ RFSP+ + ++ S D +K+W++ + + + + +LN+ D +
Sbjct: 751 TNSVNHCRFSPDDK--LLASCSADGTLKLWDVKSANERKSINVKQFFLNSEEPQEDMEVI 808
Query: 208 --CASGGKD----MNA-----MLWDLNDG---KHLHTLVHNDIITALCFSPNRSFQKIKL 253
C S D M A L+D++ G +HT H+ I FSP +
Sbjct: 809 VKCCSWSADGTRIMVAAKNKIFLFDIHTGGLLAEIHT-GHHSTIQYCDFSPQNHLAVV-- 865
Query: 254 DISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA 313
L + + L+ ++ V V FS D ++SS D+TI+LW T
Sbjct: 866 ----ALSQCCVELWNMDSCLKVADCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRLWETKK 921
Query: 314 HCKFTIVDLE 323
CK + + L+
Sbjct: 922 VCKNSAIVLK 931
Score = 164 (62.8 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 60/235 (25%), Positives = 103/235 (43%)
Query: 14 GHNGWVTQIATNPKFPD---TILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
GH V I +F D T++S S D+++ +W ++ + L+ H + D
Sbjct: 1009 GHKKTVRHI----QFTDDGKTLISSSDDSSIQVWNWQSEEYVF------LQAHQETVKDF 1058
Query: 71 VLSSDGNYALSGSWDKTLR-LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKT 129
L + LS S+D T++ +W + G+ + F H VLS S D + S+S DKT
Sbjct: 1059 KLLKNSKL-LSWSFDGTVKKIWSIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKT 1117
Query: 130 IKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDR-MVKVWNLTN------ 182
K+W+ + GH V C FS + +++ G D +++WN++N
Sbjct: 1118 AKIWSFELLSPLHELR-GHKGCVRCSVFSVDST---LLATGDDNGEIRIWNVSNGELLHL 1173
Query: 183 CKLKINHSG---HTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHN 234
C + G H G++ + SPD + S G + W++ G+ T N
Sbjct: 1174 CAPILVEEGAATHGGWVTDLCFSPDSKMLVSAGGYLK--WWNVVTGESSQTFYTN 1226
Score = 147 (56.8 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 54/207 (26%), Positives = 93/207 (44%)
Query: 52 NYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 111
N + Q R+ GH + I + DG +S S D ++++W+ + + + H + V
Sbjct: 1000 NNRIFQSRI-GHKKTVRHIQFTDDGKTLISSSDDSSIQVWNWQSEEYVF-LQAHQETVKD 1057
Query: 112 VAFSVDNRQIVSSSRDKTIK-LWNTLAHCKFTIVEDG--HSDWVSCVRFSPNHQNPIIVS 168
+ N +++S S D T+K +W+ + I +D H D V SP+ S
Sbjct: 1058 FKL-LKNSKLLSWSFDGTVKKIWSIITG---RIEKDFVCHQDTVLSCDISPDATKFSSTS 1113
Query: 169 AGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHL 228
A D+ K+W+ GH G + S D +L A+G + +W++++G+ L
Sbjct: 1114 A--DKTAKIWSFELLSPLHELRGHKGCVRCSVFSVDSTLLATGDDNGEIRIWNVSNGELL 1171
Query: 229 HT----LV------HNDIITALCFSPN 245
H LV H +T LCFSP+
Sbjct: 1172 HLCAPILVEEGAATHGGWVTDLCFSPD 1198
>UNIPROTKB|B4P7Q3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7245 "Drosophila yakuba"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CM000158 OrthoDB:EOG45DV4X RefSeq:XP_002091367.1
ProteinModelPortal:B4P7Q3 STRING:B4P7Q3 EnsemblMetazoa:FBtr0258798
GeneID:6530451 KEGG:dya:Dyak_GE12280 FlyBase:FBgn0230036
Uniprot:B4P7Q3
Length = 335
Score = 207 (77.9 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 61/225 (27%), Positives = 98/225 (43%)
Query: 6 LQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSH 65
L L TL GH G + +A +PK + SC D + IW LT + + GH
Sbjct: 4 LILEHTLQGHKGRIWGVAWHPK-GNVFASCGEDKAIRIWSLTGN--TWSTKTILSDGHKR 60
Query: 66 FISDIVLSSDGNYALSGSWDKTLRLWDLAAGK--TTRRFEDHTKDVLSVAFSVDNRQIVS 123
I +I S G Y S S+D T +W ++G+ E H +V SV++S + +
Sbjct: 61 TIREIQWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLAT 120
Query: 124 SSRDKTIKLWNTLAHCKF--TIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVW--- 178
SRDK++ +W +F V + H+ V V + P + I+ SA +D +K++
Sbjct: 121 CSRDKSVWIWEVAGDDEFECAAVLNSHTQDVKRVVWHPTKE--ILASASYDNTIKMYAEE 178
Query: 179 ---NLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLW 220
N +C + + HT + + DG S D +W
Sbjct: 179 PIDNDWDCTATL--TSHTSTIWGIDFDADGERLVSCSDDTTVKIW 221
Score = 149 (57.5 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 51/220 (23%), Positives = 95/220 (43%)
Query: 103 EDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHC--KFTIVEDGHSDWVSCVRFSPN 160
+ H + VA+ S DK I++W+ + TI+ DGH + +++SP
Sbjct: 11 QGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREIQWSPC 70
Query: 161 HQNPIIVSAGWDRMVKVWNLTNCKLKINHS--GHTGYLNTVTVSPDGSLCASGGKDMNAM 218
Q + SA +D +W+ ++ + + N + GH + +V+ S G L A+ +D +
Sbjct: 71 GQ--YLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVW 128
Query: 219 LWDL-NDGKHLHTLV---HNDIITALCFSPNRSFQKIKLDISRTLQKSNLI-LY---PI- 269
+W++ D + V H + + + P + +I + N I +Y PI
Sbjct: 129 IWEVAGDDEFECAAVLNSHTQDVKRVVWHPTK-------EILASASYDNTIKMYAEEPID 181
Query: 270 NHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLW 309
N S + + F D ++VS S D T+K+W
Sbjct: 182 NDWDCTATLTSHTSTIWGIDFDADGERLVSCSDDTTVKIW 221
Score = 51 (23.0 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 283 RDVLSVAFS-VDNRQIVSSSRDKTIKLW 309
+DV SV ++ V Q++S S D TIK+W
Sbjct: 304 QDVNSVQWNPVVAGQLISCSDDGTIKIW 331
Score = 44 (20.5 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 6/21 (28%), Positives = 13/21 (61%)
Query: 352 WSTDGQTLFAGYSDNTIRVWQ 372
+ DG+ L + D T+++W+
Sbjct: 202 FDADGERLVSCSDDTTVKIWR 222
>UNIPROTKB|F1NYZ8 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0008013 "beta-catenin
binding" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 EMBL:AADN02020878
EMBL:AADN02020879 EMBL:AADN02020880 EMBL:AADN02020881
EMBL:AADN02020882 EMBL:AADN02020883 EMBL:AADN02020884
EMBL:AADN02020885 EMBL:AADN02020886 EMBL:AADN02020887
EMBL:AADN02020888 EMBL:AADN02020889 EMBL:AADN02020890
EMBL:AADN02020891 EMBL:AADN02020892 EMBL:AADN02020893
EMBL:AADN02020894 EMBL:AADN02020895 EMBL:AADN02020896
EMBL:AADN02020897 EMBL:AADN02020898 IPI:IPI00594570
Ensembl:ENSGALT00000001912 ArrayExpress:F1NYZ8 Uniprot:F1NYZ8
Length = 517
Score = 213 (80.0 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 86/320 (26%), Positives = 132/320 (41%)
Query: 12 LNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLK------GH-- 63
L GH V A NP D + S S D+T IW L+ + T+ G Q L+ G
Sbjct: 165 LRGHESEVFICAWNP-VSDLLASGSGDSTARIWNLSENSTS-GSTQLVLRHCIREGGQDV 222
Query: 64 --SHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 121
+ ++ + +S+G +GS+D R+W G H + ++ ++ I
Sbjct: 223 PSNKDVTSLDWNSEGTLLATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGNFI 281
Query: 122 VSSSRDKTIKLWNTLAHCKFTIVE-DGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL 180
+S+ DKT +W+ AH + HS V + N+ S D + V L
Sbjct: 282 LSAGVDKTTIIWD--AHTGEAKQQFPFHSAPALDVDWQSNNT---FASCSTDMCIHVCKL 336
Query: 181 TNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTL-VHNDIITA 239
+ GHT +N + P G+L AS DM +W + +H L HN I
Sbjct: 337 GQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDSCVHDLQAHNKEIYT 396
Query: 240 LCFSP--------NRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFS 291
+ +SP N + LD S + S + L+ ++ G V SVAFS
Sbjct: 397 IKWSPTGPGTNNPNANLMLASLD-SASFD-STVRLWDVDRGICIHTLTKHQEPVYSVAFS 454
Query: 292 VDNRQIVSSSRDKTIKLWNT 311
D R + S S DK + +WNT
Sbjct: 455 PDGRYLASGSFDKCVHIWNT 474
Score = 184 (69.8 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 63/252 (25%), Positives = 111/252 (44%)
Query: 3 TETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKG 62
T+ L TL H G + + N K + ILS D T IIW D + G +++
Sbjct: 253 TKDGNLASTLGQHKGPIFALKWNKK-GNFILSAGVDKTTIIW-----DAHTGEAKQQFPF 306
Query: 63 HSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 122
HS D+ S+ +A S S D + + L + + F+ HT +V ++ + +
Sbjct: 307 HSAPALDVDWQSNNTFA-SCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLA 365
Query: 123 SSSRDKTIKLWNTLAH-CKFTIVEDGHSDWVSCVRFSP-----NHQNPIIV-----SAGW 171
S S D T+K+W+ C + H+ + +++SP N+ N ++ SA +
Sbjct: 366 SCSDDMTLKIWSMKQDSCVHDL--QAHNKEIYTIKWSPTGPGTNNPNANLMLASLDSASF 423
Query: 172 DRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTL 231
D V++W++ + H + +V SPDG ASG D +W+ G +H+
Sbjct: 424 DSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSY 483
Query: 232 VHNDIITALCFS 243
I +C++
Sbjct: 484 RGTGGIFEVCWN 495
Score = 158 (60.7 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 53/206 (25%), Positives = 93/206 (45%)
Query: 30 DTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLR 89
+T SCS D + + KL +D P K +GH++ ++ I GN S S D TL+
Sbjct: 320 NTFASCSTDMCIHVCKLGQDR-----PIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLK 374
Query: 90 LWDLAAGKTTRRFEDHTKDVLSVAFSVD-------NRQIV-----SSSRDKTIKLWNT-L 136
+W + + H K++ ++ +S N ++ S+S D T++LW+
Sbjct: 375 IWSMKQDSCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASLDSASFDSTVRLWDVDR 434
Query: 137 AHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYL 196
C T+ + H + V V FSP+ + + S +D+ V +WN L ++ G TG +
Sbjct: 435 GICIHTLTK--HQEPVYSVAFSPDGR--YLASGSFDKCVHIWNTQTGALVHSYRG-TGGI 489
Query: 197 NTVTVSPDGSLCASGGKDMNAMLWDL 222
V + G + D + + DL
Sbjct: 490 FEVCWNAAGDKVGASASDGSVCVLDL 515
Score = 56 (24.8 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 340 TKADPPMCLSLAWSTDGQTLFAGYSDNTIRVW 371
TK P+ S+A+S DG+ L +G D + +W
Sbjct: 442 TKHQEPV-YSVAFSPDGRYLASGSFDKCVHIW 472
>TAIR|locus:2012971 [details] [associations]
symbol:AT1G71840 "AT1G71840" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0005829 "cytosol" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 GO:GO:0005829
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 HOGENOM:HOG000261676 OMA:VWSFEVG HSSP:P16649
EMBL:AY080732 EMBL:BT001964 IPI:IPI00538190 RefSeq:NP_177329.2
UniGene:At.44000 ProteinModelPortal:Q8RXQ4 SMR:Q8RXQ4 IntAct:Q8RXQ4
PRIDE:Q8RXQ4 EnsemblPlants:AT1G71840.1 GeneID:843514
KEGG:ath:AT1G71840 TAIR:At1g71840 InParanoid:Q8RXQ4
PhylomeDB:Q8RXQ4 ProtClustDB:CLSN2680639 ArrayExpress:Q8RXQ4
Genevestigator:Q8RXQ4 Uniprot:Q8RXQ4
Length = 407
Score = 225 (84.3 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 74/315 (23%), Positives = 143/315 (45%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
T GH G + +A +P + + D+ +WK+ D +P GH +S +
Sbjct: 65 TFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELP-----GHKDSVSCL 119
Query: 71 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 130
S DG SG D ++++D ++G + + V + +++ S D ++
Sbjct: 120 AFSYDGQLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIVLAGSEDCSL 179
Query: 131 KLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCK-LKI-- 187
+WN + GH+ V+C F+P+ + +I + D + VWN C+ + I
Sbjct: 180 WMWNADKEAYLNMFS-GHNLNVTCGDFTPDGK--LICTGSDDASLIVWNPKTCESIHIVK 236
Query: 188 NHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTL-VHNDIITALCFSPNR 246
H HT L + ++ + SL SG KD + + ++ GK + +L H D + + FSP+
Sbjct: 237 GHPYHTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSS 296
Query: 247 SFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRD--VLSVAFSVDNRQIVSSSRDK 304
+ I L + + K LI++ + H TP F + V S+ + ++ + + +
Sbjct: 297 A--TIPLAATGGMDKK-LIIWDLQHS---TPRFICEHEEGVTSLTWIGTSKYLATGCANG 350
Query: 305 TIKLWNTL-AHCKFT 318
T+ +W++L +C T
Sbjct: 351 TVSIWDSLLGNCVHT 365
Score = 124 (48.7 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 50/219 (22%), Positives = 98/219 (44%)
Query: 13 NGHNGWVTQIATNPKFPDTILSC--SRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
+GHN + PD L C S D +LI+W ++ + V K H+ ++ +
Sbjct: 194 SGHN---LNVTCGDFTPDGKLICTGSDDASLIVWNPKTCESIHIV--KGHPYHTEGLTCL 248
Query: 71 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI---VSSSRD 127
++S+ + A+SGS D ++ + ++ GK HT V V FS + I + D
Sbjct: 249 DINSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGMD 308
Query: 128 KTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN--LTNCKL 185
K + +W+ L H + + H + V+ + + + + + + V +W+ L NC +
Sbjct: 309 KKLIIWD-LQHSTPRFICE-HEEGVTSLTWIGTSK--YLATGCANGTVSIWDSLLGNC-V 363
Query: 186 KINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLND 224
H GH + ++VS + S D A +++ ++
Sbjct: 364 HTYH-GHQDAVQAISVSTNTDFIVSVSVDNTARVFESSE 401
>ASPGD|ASPL0000008575 [details] [associations]
symbol:AN6217 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:BN001301 EMBL:AACD01000105 KO:K03361
RefSeq:XP_663821.1 ProteinModelPortal:Q5AZR3 STRING:Q5AZR3
EnsemblFungi:CADANIAT00006785 GeneID:2870808 KEGG:ani:AN6217.2
HOGENOM:HOG000164406 OMA:SISEGRC OrthoDB:EOG4XWK5Z Uniprot:Q5AZR3
Length = 618
Score = 226 (84.6 bits), Expect = 5.7e-16, P = 5.7e-16
Identities = 69/239 (28%), Positives = 114/239 (47%)
Query: 12 LNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV 71
L GH V + + K +T +S SRD TL IW D G + L GH +
Sbjct: 328 LRGHTSTVRCLKMSDK--NTAISGSRDTTLRIW-----DLRTGTCRSVLVGHQASVR--C 378
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
L+ G+ +SGS+D T R+W ++ G+ R H + ++AF D R+I + S D +++
Sbjct: 379 LAVHGDIVVSGSYDTTARVWSISEGRFLRALSGHFSQIYAIAF--DGRRIATGSLDTSVR 436
Query: 132 LWN-TLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS 190
+W+ C I++ GH+ V ++ S + +V+ G D V+VW+LT +
Sbjct: 437 IWDPNTGQCH-AILQ-GHTSLVGQLQMSGD----TLVTGGSDGSVRVWSLTRMAPIHRLA 490
Query: 191 GHTGYLNTVT-VSPDGSLCASGGKDMNAMLWDLNDGKHLHTL-VHNDIITALCFSPNRS 247
H N+VT + D + SGG D +W L G+ L L +D + + F ++
Sbjct: 491 AHD---NSVTSLQFDNNRIVSGGSDGRVKVWCLRTGQLLRELSTPSDTVWRVTFEEEKA 546
Score = 218 (81.8 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 68/230 (29%), Positives = 110/230 (47%)
Query: 17 GWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDG 76
G VT + PK+ + S DN K+ DTN G QK L+GH + +V D
Sbjct: 254 GVVTSLHLTPKY----IVASLDNA----KIHVYDTN-GENQKTLEGHVMGVWAMV-PWD- 302
Query: 77 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNT- 135
N +SG D+ +R+W++A G++ HT V + S D +S SRD T+++W+
Sbjct: 303 NILVSGGCDREVRVWNMATGESIYLLRGHTSTVRCLKMS-DKNTAISGSRDTTLRIWDLR 361
Query: 136 LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGY 195
C+ +V GH V C+ H + I+VS +D +VW+++ + SGH
Sbjct: 362 TGTCRSVLV--GHQASVRCLAV---HGD-IVVSGSYDTTARVWSISEGRFLRALSGHFSQ 415
Query: 196 LNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV--HNDIITALCFS 243
+ + DG A+G D + +WD N G+ H ++ H ++ L S
Sbjct: 416 IYAIAF--DGRRIATGSLDTSVRIWDPNTGQ-CHAILQGHTSLVGQLQMS 462
Score = 133 (51.9 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 48/195 (24%), Positives = 83/195 (42%)
Query: 117 DNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVK 176
D +S SRD T+++W+ +++ GH V C+ H + I+VS +D +
Sbjct: 342 DKNTAISGSRDTTLRIWDLRTGTCRSVLV-GHQASVRCLAV---HGD-IVVSGSYDTTAR 396
Query: 177 VWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV--HN 234
VW+++ + SGH + + DG A+G D + +WD N G+ H ++ H
Sbjct: 397 VWSISEGRFLRALSGHFSQIYAIAF--DGRRIATGSLDTSVRIWDPNTGQ-CHAILQGHT 453
Query: 235 DIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDN 294
++ L S + R + + PI+ V S+ F DN
Sbjct: 454 SLVGQLQMSGDTLVTGGSDGSVRVWSLTRMA--PIHRLAAHD------NSVTSLQF--DN 503
Query: 295 RQIVSSSRDKTIKLW 309
+IVS D +K+W
Sbjct: 504 NRIVSGGSDGRVKVW 518
Score = 132 (51.5 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 48/192 (25%), Positives = 89/192 (46%)
Query: 119 RQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVW 178
+ IV+S + I +++T + T+ +GH V V N I+VS G DR V+VW
Sbjct: 264 KYIVASLDNAKIHVYDTNGENQKTL--EGH---VMGVWAMVPWDN-ILVSGGCDREVRVW 317
Query: 179 NLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIIT 238
N+ + GHT + + +S D + SG +D +WDL G LV + +
Sbjct: 318 NMATGESIYLLRGHTSTVRCLKMS-DKNTAISGSRDTTLRIWDLRTGTCRSVLVGHQA-S 375
Query: 239 ALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIV 298
C + + + +S + + + + I+ G+ F + ++AF D R+I
Sbjct: 376 VRCLAVHGD-----IVVSGSYDTTARV-WSISEGRFLRALSGHFSQIYAIAF--DGRRIA 427
Query: 299 SSSRDKTIKLWN 310
+ S D ++++W+
Sbjct: 428 TGSLDTSVRIWD 439
Score = 124 (48.7 bits), Expect = 0.00015, P = 0.00015
Identities = 36/131 (27%), Positives = 60/131 (45%)
Query: 5 TLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHS 64
T Q L GH V Q+ + DT+++ D ++ +W LTR P RL H
Sbjct: 442 TGQCHAILQGHTSLVGQLQMSG---DTLVTGGSDGSVRVWSLTRM-----APIHRLAAHD 493
Query: 65 HFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSS 124
+ ++ L D N +SG D +++W L G+ R + V V F + I+SS
Sbjct: 494 NSVTS--LQFDNNRIVSGGSDGRVKVWCLRTGQLLRELSTPSDTVWRVTFEEEKAVIMSS 551
Query: 125 SRDKTI-KLWN 134
+T+ ++W+
Sbjct: 552 RSGRTVMEVWS 562
Score = 53 (23.7 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 356 GQTLFAGYSDNTIRVWQVS 374
G TL G SD ++RVW ++
Sbjct: 463 GDTLVTGGSDGSVRVWSLT 481
Score = 39 (18.8 bits), Expect = 7.1e-15, Sum P(2) = 7.1e-15
Identities = 6/17 (35%), Positives = 10/17 (58%)
Query: 355 DGQTLFAGYSDNTIRVW 371
D + +G SD ++VW
Sbjct: 502 DNNRIVSGGSDGRVKVW 518
>UNIPROTKB|O14727 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9606 "Homo sapiens" [GO:0006952 "defense response"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0001843 "neural tube closure" evidence=IEA] [GO:0006309
"apoptotic DNA fragmentation" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000166 "nucleotide binding" evidence=TAS]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=NAS] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=IDA;TAS] [GO:0042981
"regulation of apoptotic process" evidence=TAS] [GO:0043293
"apoptosome" evidence=IDA;TAS] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IDA] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006915
"apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] Reactome:REACT_578 InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 Pathway_Interaction_DB:p75ntrpathway GO:GO:0007399
GO:GO:0006952 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000166 DrugBank:DB00171 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
Pathway_Interaction_DB:caspase_pathway EMBL:CH471054 GO:GO:0043531
GO:GO:0001843 GO:GO:0097193 GO:GO:0006309 GO:GO:0008656
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 EMBL:AF013263 EMBL:AJ243003
EMBL:AJ243004 EMBL:AJ243005 EMBL:AJ243006 EMBL:AJ243007
EMBL:AJ243008 EMBL:AJ243009 EMBL:AJ243010 EMBL:AJ243011
EMBL:AJ243048 EMBL:AJ243107 EMBL:AF134397 EMBL:AF149794
EMBL:AB007873 EMBL:AB103079 EMBL:BC136531 EMBL:BC136532
EMBL:AJ133643 EMBL:AJ133644 EMBL:AJ133645 EMBL:AF248734
IPI:IPI00023630 IPI:IPI00217460 IPI:IPI00217461 IPI:IPI00217462
IPI:IPI00217463 IPI:IPI00375875 PIR:T03818 RefSeq:NP_001151.1
RefSeq:NP_037361.1 RefSeq:NP_863651.1 RefSeq:NP_863658.1
RefSeq:NP_863659.1 UniGene:Hs.552567 PDB:1C15 PDB:1CWW PDB:1CY5
PDB:1Z6T PDB:2P1H PDB:2YGS PDB:3IZA PDB:3YGS PDBsum:1C15
PDBsum:1CWW PDBsum:1CY5 PDBsum:1Z6T PDBsum:2P1H PDBsum:2YGS
PDBsum:3IZA PDBsum:3YGS ProteinModelPortal:O14727 SMR:O14727
DIP:DIP-27624N IntAct:O14727 MINT:MINT-96751 STRING:O14727
PhosphoSite:O14727 PaxDb:O14727 PRIDE:O14727
Ensembl:ENST00000333991 Ensembl:ENST00000357310
Ensembl:ENST00000359972 Ensembl:ENST00000547045
Ensembl:ENST00000550527 Ensembl:ENST00000551964
Ensembl:ENST00000552268 GeneID:317 KEGG:hsa:317 UCSC:uc001tfy.3
UCSC:uc001tfz.3 UCSC:uc001tga.3 UCSC:uc001tgb.3 UCSC:uc001tgc.3
CTD:317 GeneCards:GC12P099039 HGNC:HGNC:576 HPA:HPA031373
MIM:602233 neXtProt:NX_O14727 PharmGKB:PA24868 HOVERGEN:HBG018730
InParanoid:O14727 KO:K02084 OMA:KVCKNSA PhylomeDB:O14727
Pathway_Interaction_DB:hivnefpathway BindingDB:O14727
ChEMBL:CHEMBL1795093 EvolutionaryTrace:O14727 GenomeRNAi:317
NextBio:1287 PMAP-CutDB:O14727 ArrayExpress:O14727 Bgee:O14727
Genevestigator:O14727 GermOnline:ENSG00000120868 InterPro:IPR017251
PIRSF:PIRSF037646 Uniprot:O14727
Length = 1248
Score = 229 (85.7 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 71/290 (24%), Positives = 124/290 (42%)
Query: 38 DNTLII--WKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAA 95
DN ++ W ++ TN + + ++ H+ + S DG S DKTL+++
Sbjct: 589 DNGMLYLEWINKKNITN--LSRLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAET 646
Query: 96 GKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCV 155
G+ + H +VL AFS D+R I + S DK +K+WN++ + D HS+ V+C
Sbjct: 647 GEKLLEIKAHEDEVLCCAFSTDDRFIATCSVDKKVKIWNSMTG-ELVHTYDEHSEQVNCC 705
Query: 156 RFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDM 215
F+ + + ++ + D +K+W+L + + GHT +N SPD L AS D
Sbjct: 706 HFTNSSHHLLLATGSSDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADG 765
Query: 216 NAMLWDLNDGKHLHTLVHNDIITALCFSPNRSFQKI------KLDISRTL--QKSNLILY 267
LWD ++ L P + I D +R + K+ + L+
Sbjct: 766 TLKLWDATSANERKSINVKQFFLNL-EDPQEDMEVIVKCCSWSADGARIMVAAKNKIFLF 824
Query: 268 PINHGKMETPFFSLFRDVLSVA-FSVDNRQIVSSSRDKTIKLWNTLAHCK 316
I+ + + + FS N V + ++LWNT + K
Sbjct: 825 DIHTSGLLGEIHTGHHSTIQYCDFSPQNHLAVVALSQYCVELWNTDSRSK 874
Score = 186 (70.5 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 76/310 (24%), Positives = 136/310 (43%)
Query: 32 ILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLW 91
I SC D TL ++K +T G +K H + S+D + + S DK +++W
Sbjct: 630 IASCGADKTLQVFKA---ET--GEKLLEIKAHEDEVLCCAFSTDDRFIATCSVDKKVKIW 684
Query: 92 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV--SSSRDKTIKLWN-TLAHCKFTIVEDGH 148
+ G+ +++H++ V F+ + ++ + S D +KLW+ C+ T+ GH
Sbjct: 685 NSMTGELVHTYDEHSEQVNCCHFTNSSHHLLLATGSSDCFLKLWDLNQKECRNTMF--GH 742
Query: 149 SDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSL- 207
++ V+ RFSP+ + ++ S D +K+W+ T+ + + + +LN D +
Sbjct: 743 TNSVNHCRFSPDDK--LLASCSADGTLKLWDATSANERKSINVKQFFLNLEDPQEDMEVI 800
Query: 208 ---C---ASGGKDMNA-----MLWDLNDGK---HLHTLVHNDIITALCFSPNRSFQKIKL 253
C A G + M A L+D++ +HT H+ I FSP +
Sbjct: 801 VKCCSWSADGARIMVAAKNKIFLFDIHTSGLLGEIHT-GHHSTIQYCDFSPQNHLAVV-- 857
Query: 254 DISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA 313
L + + L+ + V V FS D ++SS D+TI+LW T
Sbjct: 858 ----ALSQYCVELWNTDSRSKVADCRGHLSWVHGVMFSPDGSSFLTSSDDQTIRLWETKK 913
Query: 314 HCKFTIVDLE 323
CK + V L+
Sbjct: 914 VCKNSAVMLK 923
Score = 185 (70.2 bits), Expect = 7.1e-11, P = 7.1e-11
Identities = 60/226 (26%), Positives = 102/226 (45%)
Query: 18 WVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGN 77
W Q + K T++S S D + +W D + L+GH + D L +
Sbjct: 1007 WHIQFTADEK---TLISSSDDAEIQVWNWQLDKCIF------LRGHQETVKDFRLLKNSR 1057
Query: 78 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA 137
LS S+D T+++W++ G + F H VLS S D + S+S DKT K+W+
Sbjct: 1058 L-LSWSFDGTVKVWNIITGNKEKDFVCHQGTVLSCDISHDATKFSSTSADKTAKIWSFDL 1116
Query: 138 HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDR-MVKVWNLTNCKL-----KINHSG 191
+ GH+ V C FS + +++ G D +++WN++N +L ++ G
Sbjct: 1117 LLPLHELR-GHNGCVRCSAFSVDST---LLATGDDNGEIRIWNVSNGELLHLCAPLSEEG 1172
Query: 192 ---HTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHN 234
H G++ + SPDG + S G + W++ G+ T N
Sbjct: 1173 AATHGGWVTDLCFSPDGKMLISAGGYIK--WWNVVTGESSQTFYTN 1216
Score = 160 (61.4 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 65/251 (25%), Positives = 106/251 (42%)
Query: 67 ISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSSS 125
+S LS Y G + + + +L + + RF+ H K V + F+ D + ++SSS
Sbjct: 964 VSCCCLSPHLQYIAFGDENGAIEILELVNNRIFQSRFQ-HKKTVWHIQFTADEKTLISSS 1022
Query: 126 RDKTIKLWN-TLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCK 184
D I++WN L C F GH + V R N + ++S +D VKVWN+
Sbjct: 1023 DDAEIQVWNWQLDKCIFL---RGHQETVKDFRLLKNSR---LLSWSFDGTVKVWNIITGN 1076
Query: 185 LKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFS 243
+ + H G + + +S D + +S D A +W + LH L HN + FS
Sbjct: 1077 KEKDFVCHQGTVLSCDISHDATKFSSTSADKTAKIWSFDLLLPLHELRGHNGCVRCSAFS 1136
Query: 244 PNRSFQKIKLDIS--RTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSS 301
+ + D R SN L + E + V + FS D + ++S+
Sbjct: 1137 VDSTLLATGDDNGEIRIWNVSNGELLHLCAPLSEEGAATHGGWVTDLCFSPDGKMLISAG 1196
Query: 302 RDKTIKLWNTL 312
IK WN +
Sbjct: 1197 G--YIKWWNVV 1205
Score = 144 (55.7 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 55/212 (25%), Positives = 95/212 (44%)
Query: 24 TNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGS 83
TN + + S D L +W L + + + + GH++ ++ S D S S
Sbjct: 708 TNSSHHLLLATGSSDCFLKLWDLNQKEC-----RNTMFGHTNSVNHCRFSPDDKLLASCS 762
Query: 84 WDKTLRLWDLAAGK-----TTRRF----EDHTKD----VLSVAFSVDNRQIVSSSRDKTI 130
D TL+LWD + ++F ED +D V ++S D +I+ ++++K I
Sbjct: 763 ADGTLKLWDATSANERKSINVKQFFLNLEDPQEDMEVIVKCCSWSADGARIMVAAKNK-I 821
Query: 131 KLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKI-NH 189
L++ + GH + FSP QN + V A V++WN T+ + K+ +
Sbjct: 822 FLFDIHTSGLLGEIHTGHHSTIQYCDFSP--QNHLAVVALSQYCVELWN-TDSRSKVADC 878
Query: 190 SGHTGYLNTVTVSPDGSLCASGGKDMNAMLWD 221
GH +++ V SPDGS + D LW+
Sbjct: 879 RGHLSWVHGVMFSPDGSSFLTSSDDQTIRLWE 910
Score = 141 (54.7 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 49/204 (24%), Positives = 87/204 (42%)
Query: 52 NYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 111
N + Q R + H + I ++D +S S D +++W+ K H + V
Sbjct: 992 NNRIFQSRFQ-HKKTVWHIQFTADEKTLISSSDDAEIQVWNWQLDKCIF-LRGHQETVKD 1049
Query: 112 VAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGW 171
+ N +++S S D T+K+WN + K +SC +H S
Sbjct: 1050 FRL-LKNSRLLSWSFDGTVKVWNIITGNKEKDFVCHQGTVLSC---DISHDATKFSSTSA 1105
Query: 172 DRMVKVWNLTNCKLKINH-SGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLH- 229
D+ K+W+ + L ++ GH G + S D +L A+G + +W++++G+ LH
Sbjct: 1106 DKTAKIWSF-DLLLPLHELRGHNGCVRCSAFSVDSTLLATGDDNGEIRIWNVSNGELLHL 1164
Query: 230 --------TLVHNDIITALCFSPN 245
H +T LCFSP+
Sbjct: 1165 CAPLSEEGAATHGGWVTDLCFSPD 1188
Score = 52 (23.4 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 14 GHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKR 59
GH WV + +P + L+ S D T+ +W+ + N V K+
Sbjct: 880 GHLSWVHGVMFSPD-GSSFLTSSDDQTIRLWETKKVCKNSAVMLKQ 924
Score = 49 (22.3 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 352 WSTDGQTLFAGYSDNTIRVWQ 372
+S DG + D TIR+W+
Sbjct: 890 FSPDGSSFLTSSDDQTIRLWE 910
Score = 49 (22.3 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 351 AWSTDGQTLFAGYSDNTIRVWQVS 374
A+S D L G + IR+W VS
Sbjct: 1134 AFSVDSTLLATGDDNGEIRIWNVS 1157
>ZFIN|ZDB-GENE-040426-2903 [details] [associations]
symbol:fbxw11b "F-box and WD-40 domain protein
11b" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-040426-2903 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:BX465186
EMBL:BC056809 IPI:IPI00494842 RefSeq:NP_998669.2 UniGene:Dr.75211
SMR:Q6PGW4 STRING:Q6PGW4 Ensembl:ENSDART00000019252 GeneID:406825
KEGG:dre:406825 CTD:406825 InParanoid:Q6PGW4 NextBio:20818332
Uniprot:Q6PGW4
Length = 527
Score = 227 (85.0 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 85/293 (29%), Positives = 134/293 (45%)
Query: 30 DTILSCSRDNTLIIW-KLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTL 88
+ I+S RDN++ IW K T + K L GH+ + + L D ++GS D T+
Sbjct: 236 EKIISGLRDNSIKIWDKQTLECL------KILTGHTGSV--LCLQYDERVIVTGSSDSTV 287
Query: 89 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTI--VED 146
R+WD+ +G+ H + VL + F N +V+ S+D++I +W+ + ++ V
Sbjct: 288 RVWDVNSGEVLNTLIHHNEAVLHLRFC--NGLMVTCSKDRSIAVWDMASPTDISLRRVLV 345
Query: 147 GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGS 206
GH V+ V F + IVSA DR +KVW+ + C+ +GH + +
Sbjct: 346 GHRAAVNVVDFDDKY----IVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--R 399
Query: 207 LCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQ-----KIKL-DISRTL 259
L SG D LWD+ G L L H +++ + F R KIK+ D+ L
Sbjct: 400 LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAAL 459
Query: 260 QKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTL 312
P + + T R V + F D QI+SSS D TI +W+ L
Sbjct: 460 DPRA----PASTLCLRTLVEHSGR-VFRLQF--DEFQIISSSHDDTILIWDFL 505
Score = 164 (62.8 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 59/193 (30%), Positives = 90/193 (46%)
Query: 1 MSTET-LQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKR 59
M++ T + LR L GH V + + K+ I+S S D T+ +W + + +
Sbjct: 332 MASPTDISLRRVLVGHRAAVNVVDFDDKY---IVSASGDRTIKVWSTSTCEF-----VRT 383
Query: 60 LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 119
L GH I+ L +SGS D T+RLWD+ G R E H + V + F DN+
Sbjct: 384 LNGHKRGIA--CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNK 439
Query: 120 QIVSSSRDKTIKLWNTLAH----------CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSA 169
+IVS + D IK+W+ A C T+VE HS V ++F Q I+S+
Sbjct: 440 RIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVE--HSGRVFRLQFD-EFQ---IISS 493
Query: 170 GWDRMVKVWNLTN 182
D + +W+ N
Sbjct: 494 SHDDTILIWDFLN 506
Score = 154 (59.3 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 63/247 (25%), Positives = 111/247 (44%)
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
L D +SG D ++++WD + + HT VL + + D R IV+ S D T++
Sbjct: 231 LQYDDEKIISGLRDNSIKIWDKQTLECLKILTGHTGSVLCLQY--DERVIVTGSSDSTVR 288
Query: 132 LWNTLA-HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL---TNCKLKI 187
+W+ + T++ H++ V +RF N ++V+ DR + VW++ T+ L+
Sbjct: 289 VWDVNSGEVLNTLIH--HNEAVLHLRFC----NGLMVTCSKDRSIAVWDMASPTDISLRR 342
Query: 188 NHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNR 246
GH +N V + ASG D +W + + + TL H I L +
Sbjct: 343 VLVGHRAAVNVVDFDDKYIVSASG--DRTIKVWSTSTCEFVRTLNGHKRGIACLQY---- 396
Query: 247 SFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTI 306
+ +L +S + + + L+ I G V + F DN++IVS + D I
Sbjct: 397 ---RDRLVVSGS-SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKI 450
Query: 307 KLWNTLA 313
K+W+ A
Sbjct: 451 KVWDLQA 457
Score = 37 (18.1 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 355 DGQTLFAGYSDNTIRVWQV 373
D + + +G D I+VW +
Sbjct: 437 DNKRIVSGAYDGKIKVWDL 455
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 230 (86.0 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 68/240 (28%), Positives = 108/240 (45%)
Query: 1 MSTETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRL 60
M +T L GH+G V + +P + +LS S D T+ +W L G
Sbjct: 529 MDEKTASELKILYGHSGPVYGASFSPD-RNYLLSSSEDGTVRLWSLQTFTCLVGY----- 582
Query: 61 KGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ 120
KGH++ + D S G Y +SG D+ RLW + R F H DV + ++
Sbjct: 583 KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNY 642
Query: 121 IVSSSRDKTIKLWNTL-AHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
+ + S D+T++LW+ L +C + GH + + FSPN + + + D V +W+
Sbjct: 643 VATGSADRTVRLWDVLNGNC--VRIFTGHKGPIHSLTFSPNGR--FLATGATDGRVLLWD 698
Query: 180 LTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITA 239
+ + + GHT + ++ S DG + ASG D LWD K L +D TA
Sbjct: 699 IGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAV--KAFEDLETDDFTTA 756
Score = 223 (83.6 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 68/238 (28%), Positives = 106/238 (44%)
Query: 89 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGH 148
R+ D + H+ V +FS D ++SSS D T++LW+ L + GH
Sbjct: 527 RIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWS-LQTFTCLVGYKGH 585
Query: 149 SDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCK-LKINHSGHTGYLNTVTVSPDGSL 207
+ V +FSP VS G DR+ ++W + + L+I +GH +N P+ +
Sbjct: 586 NYPVWDTQFSP--YGYYFVSGGHDRVARLWATDHYQPLRI-FAGHLADVNCTRYHPNSNY 642
Query: 208 CASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLIL 266
A+G D LWD+ +G + H I +L FSPN F ++ ++L
Sbjct: 643 VATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRF------LATGATDGRVLL 696
Query: 267 YPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLET 324
+ I HG M V S+ FS D + S S D T++LW+ + DLET
Sbjct: 697 WDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVK----AFEDLET 750
Score = 174 (66.3 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 62/236 (26%), Positives = 102/236 (43%)
Query: 14 GHNG--WVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV 71
GHN W TQ + + +S D +W T++ P + GH ++
Sbjct: 584 GHNYPVWDTQFSPYGYY---FVSGGHDRVARLWA-----TDHYQPLRIFAGHLADVNCTR 635
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
+ NY +GS D+T+RLWD+ G R F H + S+ FS + R + + + D +
Sbjct: 636 YHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVL 695
Query: 132 LWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNC--KLKINH 189
LW+ + H GH+D V +RFS + + I+ S D V++W+ L+ +
Sbjct: 696 LWD-IGHGLMVGELKGHTDTVCSLRFSRDGE--ILASGSMDNTVRLWDAVKAFEDLETDD 752
Query: 190 -SGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCFSP 244
+ TG++N P+ S G M HLH N ++ A +SP
Sbjct: 753 FTTATGHINL----PENSQELLLGTYMTKS----TPVVHLHFTRRNLVLAAGAYSP 800
Score = 105 (42.0 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 42/183 (22%), Positives = 74/183 (40%)
Query: 67 ISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSR 126
++ + ++ D + G D T+R+W + K + SV + D I S
Sbjct: 474 LTAVDVTDDSSLIAGGFADSTVRVWSVTP-----------KKLRSVKQASDLSLIDKESD 522
Query: 127 DKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLK 186
D ++ + + I+ GHS V FSP+ ++S+ D V++W+L
Sbjct: 523 DVLERIMDEKTASELKILY-GHSGPVYGASFSPDRN--YLLSSSEDGTVRLWSLQTFTCL 579
Query: 187 INHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPN 245
+ + GH + SP G SGG D A LW + + L H + + PN
Sbjct: 580 VGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPN 639
Query: 246 RSF 248
++
Sbjct: 640 SNY 642
Score = 68 (29.0 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 346 MCLSLAWSTDGQTLFAGYSDNTIRVW 371
+C SL +S DG+ L +G DNT+R+W
Sbjct: 715 VC-SLRFSRDGEILASGSMDNTVRLW 739
>DICTYBASE|DDB_G0275323 [details] [associations]
symbol:tipD "autophagy protein 16" species:44689
"Dictyostelium discoideum" [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0031154 "culmination involved in sorocarp
development" evidence=IMP] [GO:0034274 "Atg12-Atg5-Atg16 complex"
evidence=ISS] [GO:0019776 "Atg8 ligase activity" evidence=ISS]
[GO:0016236 "macroautophagy" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275323
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013923 Pfam:PF08614 OMA:LETECQE
GenomeReviews:CM000151_GR EMBL:AAFI02000013 GO:GO:0031154
GO:GO:0016236 GO:GO:0034274 GO:GO:0019776 EMBL:AF019236 PIR:T08602
RefSeq:XP_643673.1 ProteinModelPortal:O15736 STRING:O15736
EnsemblProtists:DDB0215341 GeneID:8619939 KEGG:ddi:DDB_G0275323
ProtClustDB:CLSZ2729185 Uniprot:O15736
Length = 612
Score = 228 (85.3 bits), Expect = 3.2e-16, P = 3.2e-16
Identities = 69/259 (26%), Positives = 123/259 (47%)
Query: 57 QKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 116
+KR GH+ I + +S GN +G DK +++WD+ +G+ ++ ++SV+FS
Sbjct: 317 KKRWTGHNSEIYCMAFNSIGNLLATGGGDKCVKVWDVISGQQKSTLLGASQSIVSVSFSP 376
Query: 117 DNRQIVSSSRDKTIKLWNT-LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMV 175
++ I+ +S D + +LWNT L + T+ GH V +F +++ +V+ DR +
Sbjct: 377 NDESILGTSNDNSARLWNTELGRSRHTLT--GHIGKVYTGKFINSNR---VVTGSHDRTI 431
Query: 176 KVWNLTN--CKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTL-- 231
K+W+L C I L V + G+ ASG D + WD N G+ L
Sbjct: 432 KLWDLQKGYCTRTIFCFSSCNDL--VILGGSGTHLASGHVDHSVRFWDSNAGEPTQVLSS 489
Query: 232 VHNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFS 291
+H IT++ SP + Q + TL+ ++ + + P + + ++S
Sbjct: 490 IHEGQITSITNSPTNTNQILTNSRDHTLKIIDIRTFDTIR-TFKDPEYRNGLNWTKASWS 548
Query: 292 VDNRQIVSSSRDKTIKLWN 310
D R I S S D +I +W+
Sbjct: 549 PDGRYIASGSIDGSICIWD 567
Score = 187 (70.9 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 62/245 (25%), Positives = 110/245 (44%)
Query: 7 QLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHF 66
Q + TL G + + ++ +P ++IL S DN+ +W +T G + L GH
Sbjct: 357 QQKSTLLGASQSIVSVSFSPN-DESILGTSNDNSARLW-----NTELGRSRHTLTGH--- 407
Query: 67 ISDIVLSS--DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSS 124
I + + N ++GS D+T++LWDL G TR + V + S
Sbjct: 408 IGKVYTGKFINSNRVVTGSHDRTIKLWDLQKGYCTRTIFCFSSCNDLVILGGSGTHLASG 467
Query: 125 SRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL-TNC 183
D +++ W++ A ++ H ++ + SP + N I+ ++ D +K+ ++ T
Sbjct: 468 HVDHSVRFWDSNAGEPTQVLSSIHEGQITSITNSPTNTNQILTNSR-DHTLKIIDIRTFD 526
Query: 184 KLK-INHSGHTGYLNTVTVS--PDGSLCASGGKDMNAMLWDLNDGKHLHTL--VHNDIIT 238
++ + LN S PDG ASG D + +WD +GK + L VHN+ +
Sbjct: 527 TIRTFKDPEYRNGLNWTKASWSPDGRYIASGSIDGSICIWDATNGKTVKVLTKVHNNGSS 586
Query: 239 ALCFS 243
C S
Sbjct: 587 VCCCS 591
Score = 161 (61.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 62/234 (26%), Positives = 112/234 (47%)
Query: 2 STETLQLRGTLNGHNGWVTQIATNPKFPDT--ILSCSRDNTLIIWKLTRDDTNYGVPQKR 59
+TE + R TL GH G ++ T KF ++ +++ S D T+ +W L + G +
Sbjct: 394 NTELGRSRHTLTGHIG---KVYTG-KFINSNRVVTGSHDRTIKLWDLQK-----GYCTRT 444
Query: 60 LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFED-HTKDVLSVAFSVDN 118
+ S ++L G + SG D ++R WD AG+ T+ H + S+ S N
Sbjct: 445 IFCFSSCNDLVILGGSGTHLASGHVDHSVRFWDSNAGEPTQVLSSIHEGQITSITNSPTN 504
Query: 119 -RQIVSSSRDKTIKL-----WNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWD 172
QI+++SRD T+K+ ++T+ K +G +W +SP+ + I S D
Sbjct: 505 TNQILTNSRDHTLKIIDIRTFDTIRTFKDPEYRNG-LNWTKA-SWSPDGR--YIASGSID 560
Query: 173 RMVKVWNLTNCKL-----KINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWD 221
+ +W+ TN K K++++G + + + SP ++ S KD N + W+
Sbjct: 561 GSICIWDATNGKTVKVLTKVHNNGSS--VCCCSWSPLANIFISADKDKNIIQWE 612
Score = 141 (54.7 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 54/220 (24%), Positives = 96/220 (43%)
Query: 97 KTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA-HCKFTIVEDGHSDWVSCV 155
K +R+ H ++ +AF+ + + DK +K+W+ ++ K T++ G S + V
Sbjct: 315 KAKKRWTGHNSEIYCMAFNSIGNLLATGGGDKCVKVWDVISGQQKSTLL--GASQSIVSV 372
Query: 156 RFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDM 215
FSPN ++ I+ D ++WN + + +GH G + T + + +G D
Sbjct: 373 SFSPNDES--ILGTSNDNSARLWNTELGRSRHTLTGHIGKVYTGKFI-NSNRVVTGSHDR 429
Query: 216 NAMLWDLNDGKHLHTLVHNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPI-----N 270
LWDL G T+ CFS + L S T S + + + N
Sbjct: 430 TIKLWDLQKGYCTRTI--------FCFSSCNDL--VILGGSGTHLASGHVDHSVRFWDSN 479
Query: 271 HGKMETPFFSLFR-DVLSVAFSVDN-RQIVSSSRDKTIKL 308
G+ S+ + S+ S N QI+++SRD T+K+
Sbjct: 480 AGEPTQVLSSIHEGQITSITNSPTNTNQILTNSRDHTLKI 519
Score = 132 (51.5 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 50/193 (25%), Positives = 82/193 (42%)
Query: 14 GHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLS 73
GHN + +A N + + + D + +W D G + L G S I + S
Sbjct: 322 GHNSEIYCMAFN-SIGNLLATGGGDKCVKVW-----DVISGQQKSTLLGASQSIVSVSFS 375
Query: 74 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLW 133
+ L S D + RLW+ G++ H V + F NR +V+ S D+TIKLW
Sbjct: 376 PNDESILGTSNDNSARLWNTELGRSRHTLTGHIGKVYTGKFINSNR-VVTGSHDRTIKLW 434
Query: 134 NTL-AHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNC--KLKINHS 190
+ +C TI + + + S H + S D V+ W+ +N ++ S
Sbjct: 435 DLQKGYCTRTIFCFSSCNDLVILGGSGTH----LASGHVDHSVRFWD-SNAGEPTQVLSS 489
Query: 191 GHTGYLNTVTVSP 203
H G + ++T SP
Sbjct: 490 IHEGQITSITNSP 502
Score = 58 (25.5 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 25/94 (26%), Positives = 44/94 (46%)
Query: 285 VLSVAFSVDN-RQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELR-PDVVS--QST 340
+ S+ S N QI+++SRD T+K I+D+ T + + P+ + T
Sbjct: 495 ITSITNSPTNTNQILTNSRDHTLK-----------IIDIRTFDTIRTFKDPEYRNGLNWT 543
Query: 341 KADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVS 374
KA +WS DG+ + +G D +I +W +
Sbjct: 544 KA--------SWSPDGRYIASGSIDGSICIWDAT 569
>UNIPROTKB|P11017 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9913 "Bos taurus"
[GO:0006184 "GTP catabolic process" evidence=IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=IDA] [GO:0003924
"GTPase activity" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC140489 EMBL:M16480 EMBL:M36431 EMBL:M16539
IPI:IPI00712819 PIR:A26617 RefSeq:NP_001091030.1 UniGene:Bt.2055
ProteinModelPortal:P11017 SMR:P11017 STRING:P11017 PRIDE:P11017
Ensembl:ENSBTAT00000008508 GeneID:281202 KEGG:bta:281202 CTD:2783
InParanoid:P11017 KO:K04537 OMA:WDIETSQ NextBio:20805258
Uniprot:P11017
Length = 340
Score = 216 (81.1 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 64/230 (27%), Positives = 105/230 (45%)
Query: 16 NGWVTQIATNPKFPDTILSCSR-DNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSS 74
+ WV A P ++C DN I+ L + N V + L GH+ ++S
Sbjct: 97 SSWVMTCAYAPS--GNFVACGGLDNICSIYSLKTREGNVRV-SRELPGHTGYLSCCRFLD 153
Query: 75 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 134
D N ++ S D T LWD+ G+ T F H+ DV+S++ + D R VS + D +IKLW+
Sbjct: 154 D-NQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWD 212
Query: 135 TL-AHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCK--LKINHSG 191
+ C+ T + GH ++ V F PN + D ++++L + L +H
Sbjct: 213 VRDSMCRQTFI--GHESDINAVAFFPNGY--AFTTGSDDATCRLFDLRADQELLMYSHDN 268
Query: 192 HTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITAL 240
+ +V S G L +G D N +WD G L H++ ++ L
Sbjct: 269 IICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCL 318
Score = 189 (71.6 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 61/265 (23%), Positives = 117/265 (44%)
Query: 57 QKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 116
++ L+GH I + +D +S S D L +WD + V++ A++
Sbjct: 48 RRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAP 107
Query: 117 DNRQIVSSSRDKTIKLWNTLA---HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDR 173
+ D +++ + + + GH+ ++SC RF ++Q II S+G D
Sbjct: 108 SGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQ--IITSSG-DT 164
Query: 174 MVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV- 232
+W++ + + +GH+G + +++++PDG SG D + LWD+ D T +
Sbjct: 165 TCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIG 224
Query: 233 HNDIITALCFSPNR-SFQKIKLDISRTL----QKSNLILYPINHGKMETPFFSLFRDVLS 287
H I A+ F PN +F D + L L++Y +H ++ + S
Sbjct: 225 HESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMY--SHD-------NIICGITS 275
Query: 288 VAFSVDNRQIVSSSRDKTIKLWNTL 312
VAFS R +++ D +W+ +
Sbjct: 276 VAFSRSGRLLLAGYDDFNCNIWDAM 300
Score = 162 (62.1 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 52/214 (24%), Positives = 96/214 (44%)
Query: 12 LNGHNGWVTQIATNPKFPDT--ILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISD 69
L GH G+++ +F D I++ S D T +W + G GHS +
Sbjct: 139 LPGHTGYLSCC----RFLDDNQIITSSGDTTCALWDIETGQQTVG-----FAGHSGDVMS 189
Query: 70 IVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKT 129
+ L+ DG +SG+ D +++LWD+ + F H D+ +VAF + + S D T
Sbjct: 190 LSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDAT 249
Query: 130 IKLWNTLAHCKFTIVE-DGHSDWVSCVRFSPNHQNPIIVSAGWDRM-VKVWNLTNCKLKI 187
+L++ A + + D ++ V FS + + ++ AG+D +W+
Sbjct: 250 CRLFDLRADQELLMYSHDNIICGITSVAFSRSGR---LLLAGYDDFNCNIWDAMKGDRAG 306
Query: 188 NHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWD 221
+GH ++ + V+ DG A+G D +W+
Sbjct: 307 VLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 161 (61.7 bits), Expect = 7.8e-12, Sum P(2) = 7.8e-12
Identities = 51/223 (22%), Positives = 95/223 (42%)
Query: 97 KTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVR 156
+T R H + ++ + D+R +VS+S+D + +W++ K + S WV
Sbjct: 46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL-RSSWVMTCA 104
Query: 157 FSPNHQNPIIVSAGWDRMVKVWNLT----NCKLKINHSGHTGYLNTVTVSPDGSLCASGG 212
++P+ + G D + +++L N ++ GHTGYL+ D + S G
Sbjct: 105 YAPSGN--FVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSG 162
Query: 213 KDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPN-RSFQKIKLDISRTLQKSNLILYPIN 270
D LWD+ G+ H+ + +L +P+ R+F D S + L+ +
Sbjct: 163 -DTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDAS-------IKLWDVR 214
Query: 271 HGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA 313
F D+ +VAF + + S D T +L++ A
Sbjct: 215 DSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRA 257
Score = 64 (27.6 bits), Expect = 7.8e-12, Sum P(2) = 7.8e-12
Identities = 17/53 (32%), Positives = 23/53 (43%)
Query: 330 ELRPDVVSQSTKADPPMC--LSLAWSTDGQTLFAGYSDNTIRVWQVSVTSRGG 380
+LR D D +C S+A+S G+ L AGY D +W R G
Sbjct: 254 DLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAG 306
Score = 38 (18.4 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 347 CLSLAWSTDGQTLFAGYSDNTIRVW 371
CL + + DG + G D+ +++W
Sbjct: 317 CLGV--TDDGMAVATGSWDSFLKIW 339
>UNIPROTKB|E2RD95 [details] [associations]
symbol:GNB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537
EMBL:AAEX03004274 RefSeq:XP_536861.2 ProteinModelPortal:E2RD95
SMR:E2RD95 PRIDE:E2RD95 Ensembl:ENSCAFT00000038242 GeneID:479733
KEGG:cfa:479733 NextBio:20854866 Uniprot:E2RD95
Length = 340
Score = 216 (81.1 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 64/230 (27%), Positives = 105/230 (45%)
Query: 16 NGWVTQIATNPKFPDTILSCSR-DNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSS 74
+ WV A P ++C DN I+ L + N V + L GH+ ++S
Sbjct: 97 SSWVMTCAYAPS--GNFVACGGLDNICSIYSLKTREGNVRV-SRELPGHTGYLSCCRFLD 153
Query: 75 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 134
D N ++ S D T LWD+ G+ T F H+ DV+S++ + D R VS + D +IKLW+
Sbjct: 154 D-NQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWD 212
Query: 135 TL-AHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCK--LKINHSG 191
+ C+ T + GH ++ V F PN + D ++++L + L +H
Sbjct: 213 VRDSMCRQTFI--GHESDINAVAFFPNGY--AFTTGSDDATCRLFDLRADQELLMYSHDN 268
Query: 192 HTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITAL 240
+ +V S G L +G D N +WD G L H++ ++ L
Sbjct: 269 IICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCL 318
Score = 189 (71.6 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 61/265 (23%), Positives = 117/265 (44%)
Query: 57 QKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 116
++ L+GH I + +D +S S D L +WD + V++ A++
Sbjct: 48 RRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAP 107
Query: 117 DNRQIVSSSRDKTIKLWNTLA---HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDR 173
+ D +++ + + + GH+ ++SC RF ++Q II S+G D
Sbjct: 108 SGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQ--IITSSG-DT 164
Query: 174 MVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV- 232
+W++ + + +GH+G + +++++PDG SG D + LWD+ D T +
Sbjct: 165 TCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIG 224
Query: 233 HNDIITALCFSPNR-SFQKIKLDISRTL----QKSNLILYPINHGKMETPFFSLFRDVLS 287
H I A+ F PN +F D + L L++Y +H ++ + S
Sbjct: 225 HESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMY--SHD-------NIICGITS 275
Query: 288 VAFSVDNRQIVSSSRDKTIKLWNTL 312
VAFS R +++ D +W+ +
Sbjct: 276 VAFSRSGRLLLAGYDDFNCNIWDAM 300
Score = 162 (62.1 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 52/214 (24%), Positives = 96/214 (44%)
Query: 12 LNGHNGWVTQIATNPKFPDT--ILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISD 69
L GH G+++ +F D I++ S D T +W + G GHS +
Sbjct: 139 LPGHTGYLSCC----RFLDDNQIITSSGDTTCALWDIETGQQTVG-----FAGHSGDVMS 189
Query: 70 IVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKT 129
+ L+ DG +SG+ D +++LWD+ + F H D+ +VAF + + S D T
Sbjct: 190 LSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDAT 249
Query: 130 IKLWNTLAHCKFTIVE-DGHSDWVSCVRFSPNHQNPIIVSAGWDRM-VKVWNLTNCKLKI 187
+L++ A + + D ++ V FS + + ++ AG+D +W+
Sbjct: 250 CRLFDLRADQELLMYSHDNIICGITSVAFSRSGR---LLLAGYDDFNCNIWDAMKGDRAG 306
Query: 188 NHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWD 221
+GH ++ + V+ DG A+G D +W+
Sbjct: 307 VLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 161 (61.7 bits), Expect = 7.8e-12, Sum P(2) = 7.8e-12
Identities = 51/223 (22%), Positives = 95/223 (42%)
Query: 97 KTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVR 156
+T R H + ++ + D+R +VS+S+D + +W++ K + S WV
Sbjct: 46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL-RSSWVMTCA 104
Query: 157 FSPNHQNPIIVSAGWDRMVKVWNLT----NCKLKINHSGHTGYLNTVTVSPDGSLCASGG 212
++P+ + G D + +++L N ++ GHTGYL+ D + S G
Sbjct: 105 YAPSGN--FVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSG 162
Query: 213 KDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPN-RSFQKIKLDISRTLQKSNLILYPIN 270
D LWD+ G+ H+ + +L +P+ R+F D S + L+ +
Sbjct: 163 -DTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDAS-------IKLWDVR 214
Query: 271 HGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA 313
F D+ +VAF + + S D T +L++ A
Sbjct: 215 DSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRA 257
Score = 64 (27.6 bits), Expect = 7.8e-12, Sum P(2) = 7.8e-12
Identities = 17/53 (32%), Positives = 23/53 (43%)
Query: 330 ELRPDVVSQSTKADPPMC--LSLAWSTDGQTLFAGYSDNTIRVWQVSVTSRGG 380
+LR D D +C S+A+S G+ L AGY D +W R G
Sbjct: 254 DLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAG 306
Score = 38 (18.4 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 347 CLSLAWSTDGQTLFAGYSDNTIRVW 371
CL + + DG + G D+ +++W
Sbjct: 317 CLGV--TDDGMAVATGSWDSFLKIW 339
>UNIPROTKB|P62879 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005246
"calcium channel regulator activity" evidence=IEA] [GO:0043234
"protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0051020 "GTPase binding" evidence=IPI] [GO:0003924 "GTPase
activity" evidence=TAS] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0006112 "energy reserve metabolic process"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0048471
Reactome:REACT_111102 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0006112 GO:GO:0004871 GO:GO:0007204
EMBL:AF053356 GO:GO:0071377 GO:GO:0005246 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 HPA:HPA040736 CTD:2783
KO:K04537 OMA:WDIETSQ EMBL:M16514 EMBL:M36429 EMBL:M16538
EMBL:AF501883 EMBL:BC010073 EMBL:BC012348 EMBL:BC068003
IPI:IPI00003348 PIR:B26617 RefSeq:NP_005264.2 UniGene:Hs.185172
ProteinModelPortal:P62879 SMR:P62879 IntAct:P62879
MINT:MINT-1139073 STRING:P62879 PhosphoSite:P62879 DMDM:51317304
OGP:P62879 REPRODUCTION-2DPAGE:P62879 PaxDb:P62879 PRIDE:P62879
DNASU:2783 Ensembl:ENST00000303210 Ensembl:ENST00000393924
Ensembl:ENST00000393926 GeneID:2783 KEGG:hsa:2783 UCSC:uc003uwb.3
GeneCards:GC07P100271 HGNC:HGNC:4398 HPA:CAB010032 MIM:139390
neXtProt:NX_P62879 PharmGKB:PA28778 InParanoid:P62879
PhylomeDB:P62879 GenomeRNAi:2783 NextBio:10963 ArrayExpress:P62879
Bgee:P62879 CleanEx:HS_GNB2 Genevestigator:P62879
GermOnline:ENSG00000172354 Uniprot:P62879
Length = 340
Score = 216 (81.1 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 64/230 (27%), Positives = 105/230 (45%)
Query: 16 NGWVTQIATNPKFPDTILSCSR-DNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSS 74
+ WV A P ++C DN I+ L + N V + L GH+ ++S
Sbjct: 97 SSWVMTCAYAPS--GNFVACGGLDNICSIYSLKTREGNVRV-SRELPGHTGYLSCCRFLD 153
Query: 75 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 134
D N ++ S D T LWD+ G+ T F H+ DV+S++ + D R VS + D +IKLW+
Sbjct: 154 D-NQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWD 212
Query: 135 TL-AHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCK--LKINHSG 191
+ C+ T + GH ++ V F PN + D ++++L + L +H
Sbjct: 213 VRDSMCRQTFI--GHESDINAVAFFPNGY--AFTTGSDDATCRLFDLRADQELLMYSHDN 268
Query: 192 HTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITAL 240
+ +V S G L +G D N +WD G L H++ ++ L
Sbjct: 269 IICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCL 318
Score = 189 (71.6 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 61/265 (23%), Positives = 117/265 (44%)
Query: 57 QKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 116
++ L+GH I + +D +S S D L +WD + V++ A++
Sbjct: 48 RRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAP 107
Query: 117 DNRQIVSSSRDKTIKLWNTLA---HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDR 173
+ D +++ + + + GH+ ++SC RF ++Q II S+G D
Sbjct: 108 SGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQ--IITSSG-DT 164
Query: 174 MVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV- 232
+W++ + + +GH+G + +++++PDG SG D + LWD+ D T +
Sbjct: 165 TCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIG 224
Query: 233 HNDIITALCFSPNR-SFQKIKLDISRTL----QKSNLILYPINHGKMETPFFSLFRDVLS 287
H I A+ F PN +F D + L L++Y +H ++ + S
Sbjct: 225 HESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMY--SHD-------NIICGITS 275
Query: 288 VAFSVDNRQIVSSSRDKTIKLWNTL 312
VAFS R +++ D +W+ +
Sbjct: 276 VAFSRSGRLLLAGYDDFNCNIWDAM 300
Score = 162 (62.1 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 52/214 (24%), Positives = 96/214 (44%)
Query: 12 LNGHNGWVTQIATNPKFPDT--ILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISD 69
L GH G+++ +F D I++ S D T +W + G GHS +
Sbjct: 139 LPGHTGYLSCC----RFLDDNQIITSSGDTTCALWDIETGQQTVG-----FAGHSGDVMS 189
Query: 70 IVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKT 129
+ L+ DG +SG+ D +++LWD+ + F H D+ +VAF + + S D T
Sbjct: 190 LSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDAT 249
Query: 130 IKLWNTLAHCKFTIVE-DGHSDWVSCVRFSPNHQNPIIVSAGWDRM-VKVWNLTNCKLKI 187
+L++ A + + D ++ V FS + + ++ AG+D +W+
Sbjct: 250 CRLFDLRADQELLMYSHDNIICGITSVAFSRSGR---LLLAGYDDFNCNIWDAMKGDRAG 306
Query: 188 NHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWD 221
+GH ++ + V+ DG A+G D +W+
Sbjct: 307 VLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 161 (61.7 bits), Expect = 7.8e-12, Sum P(2) = 7.8e-12
Identities = 51/223 (22%), Positives = 95/223 (42%)
Query: 97 KTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVR 156
+T R H + ++ + D+R +VS+S+D + +W++ K + S WV
Sbjct: 46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL-RSSWVMTCA 104
Query: 157 FSPNHQNPIIVSAGWDRMVKVWNLT----NCKLKINHSGHTGYLNTVTVSPDGSLCASGG 212
++P+ + G D + +++L N ++ GHTGYL+ D + S G
Sbjct: 105 YAPSGN--FVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSG 162
Query: 213 KDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPN-RSFQKIKLDISRTLQKSNLILYPIN 270
D LWD+ G+ H+ + +L +P+ R+F D S + L+ +
Sbjct: 163 -DTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDAS-------IKLWDVR 214
Query: 271 HGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA 313
F D+ +VAF + + S D T +L++ A
Sbjct: 215 DSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRA 257
Score = 64 (27.6 bits), Expect = 7.8e-12, Sum P(2) = 7.8e-12
Identities = 17/53 (32%), Positives = 23/53 (43%)
Query: 330 ELRPDVVSQSTKADPPMC--LSLAWSTDGQTLFAGYSDNTIRVWQVSVTSRGG 380
+LR D D +C S+A+S G+ L AGY D +W R G
Sbjct: 254 DLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAG 306
Score = 38 (18.4 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 347 CLSLAWSTDGQTLFAGYSDNTIRVW 371
CL + + DG + G D+ +++W
Sbjct: 317 CLGV--TDDGMAVATGSWDSFLKIW 339
WARNING: HSPs involving 1376 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.132 0.415 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 380 380 0.00090 117 3 11 22 0.39 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1626
No. of states in DFA: 623 (66 KB)
Total size of DFA: 282 KB (2143 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 32.69u 0.09s 32.78t Elapsed: 00:00:04
Total cpu time: 32.91u 0.09s 33.00t Elapsed: 00:00:05
Start: Thu Aug 15 14:50:26 2013 End: Thu Aug 15 14:50:31 2013
WARNINGS ISSUED: 2