RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy6984
(380 letters)
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 124 bits (311), Expect = 4e-33
Identities = 60/317 (18%), Positives = 111/317 (35%), Gaps = 25/317 (7%)
Query: 56 PQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 115
++ L+GH I + +D +S S D L +WD + V++ A++
Sbjct: 47 TRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYA 106
Query: 116 VDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMV 175
+ D ++N V + + + IV++ D
Sbjct: 107 PSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTC 166
Query: 176 KVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HN 234
+W++ + +GHTG + +++++PD L SG D +A LWD+ +G T H
Sbjct: 167 ALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHE 226
Query: 235 DIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDN 294
I A+CF PN + L + M ++ + SV+FS
Sbjct: 227 SDINAICFFPNGNA----FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSG 282
Query: 295 RQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADPPMCLSLAWST 354
R +++ D +W D L L +
Sbjct: 283 RLLLAGYDDFNCNVW-----------DALKADRAGVL---------AGHDNRVSCLGVTD 322
Query: 355 DGQTLFAGYSDNTIRVW 371
DG + G D+ +++W
Sbjct: 323 DGMAVATGSWDSFLKIW 339
Score = 104 bits (260), Expect = 5e-26
Identities = 35/160 (21%), Positives = 68/160 (42%), Gaps = 3/160 (1%)
Query: 63 HSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 122
H+ + + L+ D +SG+ D + +LWD+ G + F H D+ ++ F +
Sbjct: 183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA 242
Query: 123 SSSRDKTIKL-WNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLT 181
+ S D T +L T D ++ V FS + + ++++ D VW+
Sbjct: 243 TGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGR--LLLAGYDDFNCNVWDAL 300
Query: 182 NCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWD 221
+GH ++ + V+ DG A+G D +W+
Sbjct: 301 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 103 bits (256), Expect = 2e-25
Identities = 53/308 (17%), Positives = 96/308 (31%), Gaps = 15/308 (4%)
Query: 6 LQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSH 65
++ R TL GH + + ++S S+D LIIW + S
Sbjct: 45 MRTRRTLRGHLAKIYAMHWGTDS-RLLVSASQDGKLIIWDSYT-----TNKVHAIPLRSS 98
Query: 66 FISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSS 125
++ + GNY G D +++L + R
Sbjct: 99 WVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIV 158
Query: 126 RDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKL 185
+ S + VS D K+W++
Sbjct: 159 TSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMC 218
Query: 186 KINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDI---ITALCF 242
+ +GH +N + P+G+ A+G D L+DL + L T H++I IT++ F
Sbjct: 219 RQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSF 278
Query: 243 SPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSR 302
S + + N ++ V + + D + + S
Sbjct: 279 SKSGRL------LLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSW 332
Query: 303 DKTIKLWN 310
D +K+WN
Sbjct: 333 DSFLKIWN 340
Score = 89.4 bits (220), Expect = 1e-20
Identities = 27/133 (20%), Positives = 42/133 (31%), Gaps = 4/133 (3%)
Query: 2 STETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLK 61
R T GH + I P + + S D T ++ L D
Sbjct: 212 DVREGMCRQTFTGHESDINAICFFPN-GNAFATGSDDATCRLFDLRADQELMTYSHDN-- 268
Query: 62 GHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 121
I+ + S G L+G D +WD H V + + D +
Sbjct: 269 -IICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAV 327
Query: 122 VSSSRDKTIKLWN 134
+ S D +K+WN
Sbjct: 328 ATGSWDSFLKIWN 340
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 122 bits (306), Expect = 1e-32
Identities = 70/328 (21%), Positives = 126/328 (38%), Gaps = 38/328 (11%)
Query: 60 LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 119
L GH ++ ++ + +S S D T+++WD G R + HT V ++F +
Sbjct: 13 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 72
Query: 120 QIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
+ S S D TIKLW+ + H + S IVSA D+ +K+W
Sbjct: 73 LLASCSADMTIKLWDFQGFECIRTM---HGHDHNVSSVSIMPNGDHIVSASRDKTIKMWE 129
Query: 180 LTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIIT 238
+ +GH ++ V + DG+L AS D +W + + L H ++
Sbjct: 130 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVE 189
Query: 239 ALCFSPNRSFQKIKLDISRTLQKS--------------NLILYPINHGKMETPFFSLFRD 284
+ ++P S+ I +KS + ++ ++ G
Sbjct: 190 CISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW 249
Query: 285 VLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADP 344
V V F + I+S + DKT+++W D + K+ ++ L A
Sbjct: 250 VRGVLFHSGGKFILSCADDKTLRVW-----------DYKNKRCMKTL---------NAHE 289
Query: 345 PMCLSLAWSTDGQTLFAGYSDNTIRVWQ 372
SL + + G D T++VW+
Sbjct: 290 HFVTSLDFHKTAPYVVTGSVDQTVKVWE 317
Score = 115 bits (288), Expect = 4e-30
Identities = 83/324 (25%), Positives = 135/324 (41%), Gaps = 36/324 (11%)
Query: 7 QLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHF 66
+ L+GH VT++ +P F ++S S D T+ +W D G ++ LKGH+
Sbjct: 8 PEKYALSGHRSPVTRVIFHPVFS-VMVSASEDATIKVW-----DYETGDFERTLKGHTDS 61
Query: 67 ISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSR 126
+ DI G S S D T++LWD + R H +V SV+ + IVS+SR
Sbjct: 62 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASR 121
Query: 127 DKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLK 186
DKTIK+W + GH +WV VR + + +I S D+ V+VW + + K
Sbjct: 122 DKTIKMWE-VQTGYCVKTFTGHREWVRMVRPNQD--GTLIASCSNDQTVRVWVVATKECK 178
Query: 187 INHSGHTGYLNTVT--------------------VSPDGSLCASGGKDMNAMLWDLNDGK 226
H + ++ G SG +D +WD++ G
Sbjct: 179 AELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM 238
Query: 227 HLHTLV-HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDV 285
L TLV H++ + + F F I L ++ + + + V
Sbjct: 239 CLMTLVGHDNWVRGVLFHSGGKF------ILSCADDKTLRVWDYKNKRCMKTLNAHEHFV 292
Query: 286 LSVAFSVDNRQIVSSSRDKTIKLW 309
S+ F +V+ S D+T+K+W
Sbjct: 293 TSLDFHKTAPYVVTGSVDQTVKVW 316
Score = 77.5 bits (189), Expect = 1e-16
Identities = 53/244 (21%), Positives = 90/244 (36%), Gaps = 9/244 (3%)
Query: 131 KLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS 190
K W K+ + GH V+ V F P ++VSA D +KVW+ +
Sbjct: 1 KEWIPRPPEKYAL--SGHRSPVTRVIFHPV--FSVMVSASEDATIKVWDYETGDFERTLK 56
Query: 191 GHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCFSPNRSFQK 250
GHT + ++ G L AS DM LWD + + T+ +D +
Sbjct: 57 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHI 116
Query: 251 IKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWN 310
+ +T++ ++ + G F V V + D I S S D+T+++W
Sbjct: 117 VSASRDKTIK-----MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 171
Query: 311 TLAHCKFTIVDLETKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRV 370
+ + S S+ ++ + G L +G D TI++
Sbjct: 172 VATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKM 231
Query: 371 WQVS 374
W VS
Sbjct: 232 WDVS 235
Score = 65.1 bits (157), Expect = 2e-12
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Query: 4 ETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGH 63
T TL GH+ WV + + ILSC+ D TL +W D K L H
Sbjct: 235 STGMCLMTLVGHDNWVRGVLFHSG-GKFILSCADDKTLRVW-----DYKNKRCMKTLNAH 288
Query: 64 SHFISDIVLSSDGNYALSGSWDKTLRLWD 92
HF++ + Y ++GS D+T+++W+
Sbjct: 289 EHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 103 bits (256), Expect = 3e-25
Identities = 67/385 (17%), Positives = 132/385 (34%), Gaps = 53/385 (13%)
Query: 22 IATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALS 81
+ + + L ++ I++ V + H+ + + S+DG Y +
Sbjct: 21 LDLDSQSVPDALKKQTNDYYILYNPALPR-EIDVELHKSLDHTSVVCCVKFSNDGEYLAT 79
Query: 82 GSWDKTLRLWDLAAGKTTRRFED------------------HTKDVLSVAFSVDNRQIVS 123
G +KT +++ ++ G R D + SV FS D + + +
Sbjct: 80 GC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 138
Query: 124 SSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNC 183
+ D+ I++W+ IV +VS DR V++W+L
Sbjct: 139 GAEDRLIRIWD---IENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTG 195
Query: 184 KLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV--------HND 235
+ + S G DG A+G D +WD G + L H D
Sbjct: 196 QCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKD 255
Query: 236 IITALCFSPNRSF-------QKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSV 288
+ ++ F+ + + +KL + + P + E + VLSV
Sbjct: 256 SVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSG-TCEVTYIGHKDFVLSV 314
Query: 289 AFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADPPMCL 348
A + ++ I+S S+D+ + W D ++ + L+ S + A +
Sbjct: 315 ATTQNDEYILSGSKDRGVLFW-----------DKKSGNPLLMLQGHRNSVISVA---VAN 360
Query: 349 SLAWSTDGQTLFAGYSDNTIRVWQV 373
+ + G D R+W+
Sbjct: 361 GSSLGPEYNVFATGSGDCKARIWKY 385
Score = 92.6 bits (228), Expect = 2e-21
Identities = 72/348 (20%), Positives = 125/348 (35%), Gaps = 37/348 (10%)
Query: 53 YGVPQKRLKGHSHFISDIVLSSDGNY---ALSGSWDKTLRLWDLAAGKTTR----RFEDH 105
Y VP + HS I +L D AL + L++ A + + DH
Sbjct: 2 YLVPYNQRANHSKPIPPFLLDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLDH 61
Query: 106 TKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAH-----------------CKFTIVEDGH 148
T V V FS D + + +KT +++ T
Sbjct: 62 TSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSS 120
Query: 149 SDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLC 208
++ V FSP+ + + + DR++++W++ N K+ + GH + ++ P G
Sbjct: 121 DLYIRSVCFSPDGK--FLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKL 178
Query: 209 ASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCFSPNRSFQKIK--LDISRTLQKSNLIL 266
SG D +WDL G+ TL D +T + SP LD + + S
Sbjct: 179 VSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGF 238
Query: 267 YPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKK 326
V SV F+ D + +VS S D+++KLWN + + K
Sbjct: 239 LVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWN--------LQNANNKS 290
Query: 327 MVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVS 374
+ + LS+A + + + + +G D + W
Sbjct: 291 DSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKK 338
Score = 75.2 bits (183), Expect = 1e-15
Identities = 30/137 (21%), Positives = 52/137 (37%), Gaps = 14/137 (10%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTR-------DDTNYGVPQKRLKGH 63
+ GH V + +++S S D ++ +W L N G + GH
Sbjct: 249 SGTGHKDSVYSVVFTRD-GQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGH 307
Query: 64 SHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA------FSVD 117
F+ + + + Y LSGS D+ + WD +G + H V+SVA +
Sbjct: 308 KDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPE 367
Query: 118 NRQIVSSSRDKTIKLWN 134
+ S D ++W
Sbjct: 368 YNVFATGSGDCKARIWK 384
Score = 34.8 bits (78), Expect = 0.016
Identities = 10/52 (19%), Positives = 16/52 (30%), Gaps = 5/52 (9%)
Query: 2 STETLQLRGTLNGHNGWVTQIATNPKFP-----DTILSCSRDNTLIIWKLTR 48
++ L GH V +A + + S D IWK +
Sbjct: 336 DKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 387
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 94.9 bits (234), Expect = 2e-22
Identities = 53/317 (16%), Positives = 107/317 (33%), Gaps = 35/317 (11%)
Query: 62 GHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGK-----TTRRFEDHTKDVLSVAFSV 116
H + + +S+ + +G +++WD++ + + + S
Sbjct: 49 NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLP 107
Query: 117 DNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVK 176
D ++ T+ +W+ A I + S +C + + + + S D +
Sbjct: 108 DGCTLIVGGEASTLSIWDL-AAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIA 166
Query: 177 VWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDI 236
VW+L N L GHT + + +S DG+ +GG D WDL +G+ L
Sbjct: 167 VWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQ 226
Query: 237 ITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQ 296
I +L + P + + ++ S E+ S + F+ +
Sbjct: 227 IFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLS-------LKFAYCGKW 279
Query: 297 IVSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADPPMCLSLAWSTDG 356
VS+ +D + W + + + LS S D
Sbjct: 280 FVSTGKDNLLNAW-----------RTPYGASIFQSKES----------SSVLSCDISVDD 318
Query: 357 QTLFAGYSDNTIRVWQV 373
+ + G D V++V
Sbjct: 319 KYIVTGSGDKKATVYEV 335
Score = 75.6 bits (184), Expect = 7e-16
Identities = 49/299 (16%), Positives = 92/299 (30%), Gaps = 11/299 (3%)
Query: 14 GHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLS 73
H V + + P + + +W ++ V Q ++I L
Sbjct: 49 NHGEVVCAVTISN--PTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLL 106
Query: 74 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLW 133
DG + G TL A T R + T + + +
Sbjct: 107 PDGCTLIVGGEASTLS-IWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNI 165
Query: 134 NTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHT 193
T+V ++ + + G D V+ W+L + H T
Sbjct: 166 AVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQH-DFT 224
Query: 194 GYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCFSPNRSFQKIKL 253
+ ++ P G A G + N + +N +H + +L F+ +
Sbjct: 225 SQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKW----- 279
Query: 254 DISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTL 312
T + + L + +G VLS SVD++ IV+ S DK ++ +
Sbjct: 280 -FVSTGKDNLLNAWRTPYGASIF-QSKESSSVLSCDISVDDKYIVTGSGDKKATVYEVI 336
Score = 67.1 bits (162), Expect = 6e-13
Identities = 41/295 (13%), Positives = 85/295 (28%), Gaps = 32/295 (10%)
Query: 105 HTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNP 164
+K S + D + + H + I H + V V S +
Sbjct: 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQ-INTLNHGEVVCAVTISNPTR-- 64
Query: 165 IIVSAGWDRMVKVWNLTNCKLK-----INHSGHTGYLNTVTVSPDGSLCASGGKDMNAML 219
V G VKVW++++ K ++ Y+ + + PDG GG+ +
Sbjct: 65 -HVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSI 123
Query: 220 WDLNDGKHLHTLVHNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFF 279
WDL + N+ ++ +++ + F
Sbjct: 124 WDLAAPTPRIKAELTSSA---PACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ 180
Query: 280 SLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHC--------------------KFTI 319
+ S D ++ + D T++ W+ ++
Sbjct: 181 GHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLA 240
Query: 320 VDLETKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVS 374
V +E+ + LSL ++ G+ + DN + W+
Sbjct: 241 VGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTP 295
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 89.1 bits (219), Expect = 2e-20
Identities = 68/360 (18%), Positives = 103/360 (28%), Gaps = 63/360 (17%)
Query: 50 DTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 109
K LKGH + L GN +SGS D TL++W GK R HT V
Sbjct: 2 RRGELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV 60
Query: 110 LSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNH-------- 161
S + S+ R + T +
Sbjct: 61 WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLR 120
Query: 162 -------------------------QNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYL 196
+VS +D MVKVW+ GHT
Sbjct: 121 VWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNR- 179
Query: 197 NTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDI 255
++ DG SG D + +WD+ G +HTL H + + + N +
Sbjct: 180 -VYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNIL-------V 231
Query: 256 SRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHC 315
S + I ++T + +++SS D T+KLW
Sbjct: 232 SGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLW------ 285
Query: 316 KFTIVDLETKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNT----IRVW 371
DL+T + + L S + S G + T + V
Sbjct: 286 -----DLKTGEFIRNLVTLESGGSGGV----VWRIRASNTKLVCAVGSRNGTEETKLLVL 336
Score = 82.9 bits (203), Expect = 3e-18
Identities = 38/218 (17%), Positives = 80/218 (36%), Gaps = 20/218 (9%)
Query: 15 HNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSS 74
G V + ++S + D + +W D L+GH++ + +
Sbjct: 133 LMGHVAAVRCVQYDGRRVVSGAYDFMVKVW-----DPETETCLHTLQGHTNRVYSL--QF 185
Query: 75 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 134
DG + +SGS D ++R+WD+ G H + + +VS + D T+K+W+
Sbjct: 186 DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWD 243
Query: 135 TLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKL-----KINH 189
+ + ++++ D VK+W+L + +
Sbjct: 244 I--KTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLES 301
Query: 190 SGHTGYLNTVTVSPDGSLCASGGKD----MNAMLWDLN 223
G G + + S +CA G ++ ++ D +
Sbjct: 302 GGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFD 339
Score = 75.6 bits (184), Expect = 9e-16
Identities = 43/283 (15%), Positives = 79/283 (27%), Gaps = 39/283 (13%)
Query: 91 WDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSD 150
W K+ + + H V++ +IVS S D T+K+W+ K GH+
Sbjct: 1 WRRGELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWS-AVTGKCLRTLVGHTG 58
Query: 151 WVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCAS 210
V + N L + S S
Sbjct: 59 GVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCM------HLHEKRVVS 112
Query: 211 GGKDMNAMLWDLNDGKHLHTLVHNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPIN 270
G +D +WD+ G+ LH L+ + R D + +
Sbjct: 113 GSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFM---------VKVWD 163
Query: 271 HGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEE 330
+ D +VS S D +I++W+
Sbjct: 164 PETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWD-------------------- 203
Query: 331 LRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQV 373
+ + L+ L +G +D+T+++W +
Sbjct: 204 --VETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDI 244
Score = 55.6 bits (132), Expect = 3e-09
Identities = 28/137 (20%), Positives = 50/137 (36%), Gaps = 16/137 (11%)
Query: 7 QLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHF 66
TL GH + + + ++S + D+T+ IW D Q + H
Sbjct: 208 NCIHTLTGHQSLTSGMELKD---NILVSGNADSTVKIW----DIKTGQCLQTLQGPNKHQ 260
Query: 67 ISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF-----EDHTKDVLSVAFSVDNRQI 121
+ L + N+ ++ S D T++LWDL G+ R V + S
Sbjct: 261 SAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVC 320
Query: 122 VSSSRDKT----IKLWN 134
SR+ T + + +
Sbjct: 321 AVGSRNGTEETKLLVLD 337
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 83.4 bits (204), Expect = 2e-18
Identities = 32/340 (9%), Positives = 89/340 (26%), Gaps = 43/340 (12%)
Query: 60 LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTT---RRFEDHTKDVLSVAFSV 116
+ +ISDI + + L SWD +L ++ + + +L F
Sbjct: 7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFID 66
Query: 117 DNRQIV---SSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDR 173
+ + + + + + + ++ + +
Sbjct: 67 NTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEV 126
Query: 174 MVKVWNLTNCKLKINHSGH--TGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTL 231
+ N + + T+ + S G + + L + +
Sbjct: 127 IDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGT 186
Query: 232 VHNDII--------------TALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETP 277
+ + S ++ + ++ + ++
Sbjct: 187 IEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLK 246
Query: 278 FFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVS 337
+L V S+ FS ++ + ++ D I W +L+T+K ++
Sbjct: 247 DTNLAYPVNSIEFSPRHKFLYTAGSDGIISCW-----------NLQTRKKIKNFA----- 290
Query: 338 QSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVSVTS 377
+ + L SD+T + +
Sbjct: 291 -----KFNEDSVVKIACSDNILCLATSDDTFKTNAAIDQT 325
Score = 57.9 bits (138), Expect = 5e-10
Identities = 20/162 (12%), Positives = 50/162 (30%), Gaps = 16/162 (9%)
Query: 1 MSTETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQK-- 58
E +G + +A PK + S D + + +Y ++
Sbjct: 178 PLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFA 237
Query: 59 --------RLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVL 110
+ ++ ++ I S + + D + W+L K + F +D
Sbjct: 238 FRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDS- 296
Query: 111 SVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWV 152
V + + + ++ D T K + + ++ +
Sbjct: 297 VVKIACSDNILCLATSDDTFKTNAAIDQTI-----ELNASSI 333
Score = 55.6 bits (132), Expect = 3e-09
Identities = 12/89 (13%), Positives = 27/89 (30%), Gaps = 5/89 (5%)
Query: 144 VEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLK---INHSGHTGYLNTVT 200
+E D++S ++ P+ +++ WD + V+ + + L
Sbjct: 6 IEQAPKDYISDIKIIPSKS--LLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCN 63
Query: 201 VSPDGSLCASGGKDMNAMLWDLNDGKHLH 229
+ L G +L G
Sbjct: 64 FIDNTDLQIYVGTVQGEILKVDLIGSPSF 92
Score = 52.9 bits (125), Expect = 3e-08
Identities = 21/265 (7%), Positives = 66/265 (24%), Gaps = 19/265 (7%)
Query: 2 STETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLK 61
+ + L +L + + I + ++ L + +
Sbjct: 43 QAKNVDLLQSL-RYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEAN 101
Query: 62 GHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD--NR 119
I + G + + + V + F++D +
Sbjct: 102 LGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSS 161
Query: 120 QIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNP-IIVSAGWDRMVKVW 178
+++ + ++ + + + + + D V V
Sbjct: 162 RLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVE 221
Query: 179 NLTN---------------CKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLN 223
+ +L + + +N++ SP + G D W+L
Sbjct: 222 FFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQ 281
Query: 224 DGKHLHTLVHNDIITALCFSPNRSF 248
K + + + + + + +
Sbjct: 282 TRKKIKNFAKFNEDSVVKIACSDNI 306
Score = 34.4 bits (77), Expect = 0.018
Identities = 3/32 (9%), Positives = 11/32 (34%)
Query: 349 SLAWSTDGQTLFAGYSDNTIRVWQVSVTSRGG 380
+ L D ++ V++ + ++
Sbjct: 16 DIKIIPSKSLLLITSWDGSLTVYKFDIQAKNV 47
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 81.9 bits (200), Expect = 6e-18
Identities = 40/321 (12%), Positives = 87/321 (27%), Gaps = 12/321 (3%)
Query: 55 VPQKR-LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 113
VPQ+ L+GH + L + NY ++G+ DK +R++D K + H V ++
Sbjct: 2 VPQRTTLRGHMTSVIT-CLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALK 60
Query: 114 FSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDR 173
++ + S+ C + C+ IV+ D
Sbjct: 61 YAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVR--CLDIVEYKNIKYIVTGSRDN 118
Query: 174 MVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVH 233
+ VW L +H Y + + A + ++ ++
Sbjct: 119 TLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGS 178
Query: 234 NDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVD 293
D + L +Y + S D ++
Sbjct: 179 YDNTLIVWDVAQMKCL-------YILSGHTDRIYSTIYDHERKRCISASMDT-TIRIWDL 230
Query: 294 NRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADPPMCLSLAWS 353
+ + L L +V + + S+ ++
Sbjct: 231 ENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTF 290
Query: 354 TDGQTLFAGYSDNTIRVWQVS 374
+ S+N ++ +
Sbjct: 291 YVSDNILVSGSENQFNIYNLR 311
Score = 69.9 bits (169), Expect = 6e-14
Identities = 40/374 (10%), Positives = 100/374 (26%), Gaps = 39/374 (10%)
Query: 9 RGTLNGHNGWV-TQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFI 67
R TL GH V T + + +++ + D + ++ D+ +L GH +
Sbjct: 5 RTTLRGHMTSVITCLQFEDNY---VITGADDKMIRVY-----DSINKKFLLQLSGHDGGV 56
Query: 68 SDIVLSSDGN-YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSR 126
+ + G + S + + T L + + + IV+ SR
Sbjct: 57 WALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSR 116
Query: 127 DKTIKLWN--------TLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVW 178
D T+ +W + + + + + V
Sbjct: 117 DNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVS 176
Query: 179 NLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIIT 238
+ L + L ++ D + + D + N +
Sbjct: 177 GSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELM 236
Query: 239 ALCFSPNRSFQKIKLDISRTLQ-KSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQI 297
++L + ++ + + F ++ ++ + I
Sbjct: 237 YTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNI 296
Query: 298 VSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQ 357
+ S + ++ +L + K +V + D S+ +
Sbjct: 297 LVSGSENQFNIY-----------NLRSGK--------LVHANILKDADQIWSVNFKGKTL 337
Query: 358 TLFAGYSDNTIRVW 371
+ A D +
Sbjct: 338 -VAAVEKDGQSFLE 350
Score = 50.7 bits (119), Expect = 1e-07
Identities = 9/76 (11%), Positives = 25/76 (32%), Gaps = 3/76 (3%)
Query: 105 HTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNP 164
H ++ ++ + I+ S + ++N + +D + V F
Sbjct: 280 HHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKT--- 336
Query: 165 IIVSAGWDRMVKVWNL 180
++ + D + L
Sbjct: 337 LVAAVEKDGQSFLEIL 352
Score = 44.9 bits (104), Expect = 1e-05
Identities = 34/181 (18%), Positives = 62/181 (34%), Gaps = 9/181 (4%)
Query: 44 WKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFE 103
L D L GH+ I + + +S S D T+R+WDL G+ +
Sbjct: 181 NTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQ 240
Query: 104 DHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQN 163
HT V + S ++ + H++ + F +
Sbjct: 241 GHTALVGLLRLSDKFLVSAAADGSIRGWDA----NDYSRKFSYHHTNLSAITTFYVSDN- 295
Query: 164 PIIVSAGWDRMVKVWNLTNCK-LKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
I+ +G + ++NL + K + N + +V L A+ KD + L L
Sbjct: 296 --ILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKT-LVAAVEKDGQSFLEIL 352
Query: 223 N 223
+
Sbjct: 353 D 353
Score = 35.3 bits (79), Expect = 0.009
Identities = 14/79 (17%), Positives = 24/79 (30%), Gaps = 6/79 (7%)
Query: 15 HNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSS 74
H+ ++ I T D IL +N I+ L + + + I +
Sbjct: 280 HHTNLSAITTFY-VSDNILVSGSENQFNIYNLRSGK----LVHANILKDADQIWSVNFKG 334
Query: 75 DGNYALSGSWDKTLRLWDL 93
A + D L L
Sbjct: 335 KTLVA-AVEKDGQSFLEIL 352
Score = 30.6 bits (67), Expect = 0.34
Identities = 3/40 (7%), Positives = 11/40 (27%), Gaps = 2/40 (5%)
Query: 7 QLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKL 46
+ + + + K + + +D + L
Sbjct: 315 LVHANILKDADQIWSVNFKGKT--LVAAVEKDGQSFLEIL 352
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 79.8 bits (195), Expect = 3e-17
Identities = 35/331 (10%), Positives = 84/331 (25%), Gaps = 41/331 (12%)
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFE-DHTKDVLSVAFSVDNRQI-VSSSRDKT 129
L + Y + ++ L + D+A+ + + + DNR V ++
Sbjct: 4 LKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGD 63
Query: 130 IKLWNTLAHCKFTIVEDG-----HSDWVSCVRFSPNHQNPIIVSAG----------WDRM 174
I + + SP+ +
Sbjct: 64 IYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPR 123
Query: 175 VKVWNLTNCKLK--INHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV 232
++V++ + + + + + DGSL +G D+ GK+ L
Sbjct: 124 LEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDI---YKMDVKTGKYTVALP 180
Query: 233 HNDIITALCFSPN---------RSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFR 283
+ +P+ + L + +
Sbjct: 181 LRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTG 240
Query: 284 DVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKAD 343
+ F+ + R + DL+ +K+++
Sbjct: 241 KTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAKYDLKQRKLIKAANL---------- 290
Query: 344 PPMCLSLAWSTDGQTLFAGYSDNTIRVWQVS 374
+A+ G L+ G + N + V+
Sbjct: 291 DHTYYCVAFDKKGDKLYLGGTFNDLAVFNPD 321
Score = 60.1 bits (144), Expect = 1e-10
Identities = 25/279 (8%), Positives = 54/279 (19%), Gaps = 37/279 (13%)
Query: 3 TETLQLRGTLN-GHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQ-KRL 60
+ + + P + + + L +
Sbjct: 25 VASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVP 84
Query: 61 KGHSHFISDIVLSSDGNYALSGSWDKT------------LRLWDLAAGKTTRRFEDHT-- 106
+ +S DG + L ++ A G +
Sbjct: 85 GEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMP 144
Query: 107 KDVLSVAFSVDNRQIVSSSRDKTIKLWN-------------------TLAHCKFTIVEDG 147
+ V + + D V+ + + +
Sbjct: 145 RQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPR 204
Query: 148 HSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL-TNCKLKINHSGHTGYLNTVTVSPDGS 206
H + +A +L T + T T SP
Sbjct: 205 HEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDP 264
Query: 207 LCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCFSPN 245
G + A +DL K + + + F
Sbjct: 265 NQIYGVLNRLA-KYDLKQRKLIKAANLDHTYYCVAFDKK 302
Score = 57.1 bits (136), Expect = 1e-09
Identities = 16/151 (10%), Positives = 38/151 (25%), Gaps = 4/151 (2%)
Query: 81 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCK 140
+ + L + + F D + ++ +
Sbjct: 183 NWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKT 242
Query: 141 FTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVT 200
T ++ SP N G + ++L KL I + V
Sbjct: 243 HTQEFADLTELYFTGLRSPKDPN---QIYGVLNRLAKYDLKQRKL-IKAANLDHTYYCVA 298
Query: 201 VSPDGSLCASGGKDMNAMLWDLNDGKHLHTL 231
G GG + +++ + + + +
Sbjct: 299 FDKKGDKLYLGGTFNDLAVFNPDTLEKVKNI 329
Score = 51.7 bits (122), Expect = 6e-08
Identities = 13/135 (9%), Positives = 29/135 (21%), Gaps = 6/135 (4%)
Query: 1 MSTETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRL 60
+ + IA + + D +
Sbjct: 192 PDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSV----DLKTGKTHTQEF 247
Query: 61 KGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ 120
+ + S + G + L +DL K + VAF +
Sbjct: 248 ADLTELYFTGLRSPKDPNQIYGVLN-RLAKYDLKQRKLIKAAN-LDHTYYCVAFDKKGDK 305
Query: 121 IVSSSRDKTIKLWNT 135
+ + ++N
Sbjct: 306 LYLGGTFNDLAVFNP 320
Score = 44.0 bits (102), Expect = 2e-05
Identities = 13/105 (12%), Positives = 25/105 (23%), Gaps = 8/105 (7%)
Query: 15 HNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSS 74
+P D N L + D K H +
Sbjct: 250 LTELYFTGLRSP--KDPNQIYGVLNRLAKY-----DLKQRKLIKAAN-LDHTYYCVAFDK 301
Query: 75 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 119
G+ G L +++ + + + D+ + V R
Sbjct: 302 KGDKLYLGGTFNDLAVFNPDTLEKVKNIKLPGGDMSTTTPQVFIR 346
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 78.7 bits (192), Expect = 6e-17
Identities = 39/324 (12%), Positives = 84/324 (25%), Gaps = 59/324 (18%)
Query: 30 DTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFIS--DIVLSSDGNYAL-SGSWDK 86
D IL+ +R + L++ DT K + + +++ G A + + +
Sbjct: 2 DYILAPARPDKLVVI-----DTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSE 56
Query: 87 TLRLWDLAAGKTTRRFEDHT-----KDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKF 141
+L DL G+T R + T K + A S D + + ++L +
Sbjct: 57 SLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTR 116
Query: 142 TIVEDG----------HSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKI---- 187
+ D ++ + ++ + + G D V
Sbjct: 117 VALYDAETLSRRKAFEAPRQITMLAWARDGS--KLYGLGRDLHVMDPEAGTLVEDKPIQS 174
Query: 188 -----------------NHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHT 230
+ S T D + DL G+
Sbjct: 175 WEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMR 234
Query: 231 LVHNDIITALCFSPNRSFQKI---KLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLS 287
V + + N + + + + N + + S
Sbjct: 235 EVRIMDVFYFSTAVNPAKTRAFGAYNVLESFDLEKNASIKRVPLPHS----------YYS 284
Query: 288 VAFSVDNRQIVSSSRDKTIKLWNT 311
V S D + + ++
Sbjct: 285 VNVSTDGSTVWLGGALGDLAAYDA 308
Score = 74.5 bits (181), Expect = 2e-15
Identities = 29/313 (9%), Positives = 75/313 (23%), Gaps = 22/313 (7%)
Query: 77 NYALSGSWDKTLRLWDLAAGKTTRRFE--DHTKDVLSVAFSVDNRQI-VSSSRDKTIKLW 133
+Y L+ + L + D + D + + R + ++ +++
Sbjct: 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKI 61
Query: 134 NT----LAHCKFTIVEDGHSDWVSCVRFSPNHQ---------NPIIVSAGWDRMVKVWNL 180
+ + + SP+ + +
Sbjct: 62 DLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYD 121
Query: 181 TNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITAL 240
+ + + + DGS G+D++ M G +
Sbjct: 122 AETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDP--EAGTLVEDKPIQSWEAET 179
Query: 241 CFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSS 300
P+ + + S + T + +L++ +
Sbjct: 180 YAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPT---AYRTGLLTMDLETGEMAMREV 236
Query: 301 SRDKTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLF 360
+ K +L + + P S+ STDG T++
Sbjct: 237 RIMDVFYFSTAVNPAKTRAFGAYNVLESFDLEKNASIKRVPL-PHSYYSVNVSTDGSTVW 295
Query: 361 AGYSDNTIRVWQV 373
G + + +
Sbjct: 296 LGGALGDLAAYDA 308
Score = 57.5 bits (137), Expect = 6e-10
Identities = 14/127 (11%), Positives = 31/127 (24%), Gaps = 5/127 (3%)
Query: 105 HTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNP 164
D ++ + + + +P
Sbjct: 196 GVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKT-- 253
Query: 165 IIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLND 224
+ G +++ ++L I +V VS DGS GG + +D
Sbjct: 254 --RAFGAYNVLESFDLEKNAS-IKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAET 310
Query: 225 GKHLHTL 231
+ +
Sbjct: 311 LEKKGQV 317
Score = 43.3 bits (100), Expect = 2e-05
Identities = 14/109 (12%), Positives = 30/109 (27%), Gaps = 5/109 (4%)
Query: 12 LNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWK----LTRDDTNYGVPQKRLKGHSHFI 67
++ G + + + L D KR+ H
Sbjct: 224 MDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAYNVLESFDLEKNASIKRV-PLPHSY 282
Query: 68 SDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 116
+ +S+DG+ G L +D + + + +S+A
Sbjct: 283 YSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPGNASMSLASVR 331
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 77.6 bits (189), Expect = 9e-17
Identities = 61/294 (20%), Positives = 96/294 (32%), Gaps = 47/294 (15%)
Query: 58 KRLKGHSHFISDIV-LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 116
+R+ S + L D +SG D T+++WD + R HT VL + +
Sbjct: 6 QRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDE 65
Query: 117 D--------------------------------------NRQIVSSSRDKTIKLWNTLAH 138
N +V+ S+D++I +W+
Sbjct: 66 RVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDM--A 123
Query: 139 CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNT 198
I + + IVSA DR +KVWN + C+ +GH +
Sbjct: 124 SPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIA- 182
Query: 199 VTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCFSPNRSFQKIKLDISRT 258
+ L SG D LWD+ G L L ++ + N+ D
Sbjct: 183 -CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIK 241
Query: 259 LQ--KSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWN 310
+ + L V + F D QIVSSS D TI +W+
Sbjct: 242 VWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 293
Score = 59.5 bits (142), Expect = 1e-10
Identities = 48/262 (18%), Positives = 84/262 (32%), Gaps = 51/262 (19%)
Query: 2 STETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTR------------- 48
TL+ + L GH G V + + + T S S +
Sbjct: 41 DKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLH 100
Query: 49 --------------------DDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTL 88
D + R H + V+ D Y +S S D+T+
Sbjct: 101 LRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTI 160
Query: 89 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGH 148
++W+ + + R H + + + + +R +VS S D TI+LW+
Sbjct: 161 KVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLR-----V 213
Query: 149 SDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHS---------GHTGYLNTV 199
+ + N IVS +D +KVW+L + H+G +
Sbjct: 214 LEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVF-- 271
Query: 200 TVSPDGSLCASGGKDMNAMLWD 221
+ D S D ++WD
Sbjct: 272 RLQFDEFQIVSSSHDDTILIWD 293
Score = 48.7 bits (114), Expect = 4e-07
Identities = 37/228 (16%), Positives = 73/228 (32%), Gaps = 34/228 (14%)
Query: 147 GHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGS 206
S V C+++ IVS D +K+W+ + K +GHTG + +
Sbjct: 13 ETSKGVYCLQYDDQK----IVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVI 68
Query: 207 LCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCFSPNRSFQKIKLDISRTLQKSNLIL 266
+ S + + + + ++ + I+ +
Sbjct: 69 ITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIA--------VW 120
Query: 267 YPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKK 326
+ + + D++ IVS+S D+TIK+W + T +
Sbjct: 121 DMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVW-----------NTSTCE 169
Query: 327 MVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVS 374
V L + + + +G SDNTIR+W +
Sbjct: 170 FVRTL-----------NGHKRGIACLQYRDRLVVSGSSDNTIRLWDIE 206
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 77.6 bits (189), Expect = 1e-16
Identities = 43/306 (14%), Positives = 82/306 (26%), Gaps = 24/306 (7%)
Query: 70 IVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKT 129
+ + G+ + ++ + + T + +H+ S S
Sbjct: 23 LGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGN 81
Query: 130 IKLW-NTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKIN 188
+++W T S V + + + V G +R V+ N
Sbjct: 82 VRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGN 141
Query: 189 HSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCFSPNRSF 248
+G +N+V P G D N + + N
Sbjct: 142 LTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDG 201
Query: 249 QKIKLDISRTLQKSNLILYPINHGKMETPFFSLFR---DVLSVAFSVDNRQIVSSSRDKT 305
+ G E V + +S D +I S+S DKT
Sbjct: 202 SLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKT 261
Query: 306 IKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSD 365
IK+W ++ T K+ + + L + W Q L + ++
Sbjct: 262 IKIW-----------NVATLKVEKTI------PVGTRIEDQQLGIIW--TKQALVSISAN 302
Query: 366 NTIRVW 371
I
Sbjct: 303 GFINFV 308
Score = 50.3 bits (118), Expect = 1e-07
Identities = 33/256 (12%), Positives = 64/256 (25%), Gaps = 15/256 (5%)
Query: 2 STETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLK 61
+L H+ T T+P S + IW + + +
Sbjct: 44 PVGSLTDTEIYTEHSHQTTVAKTSPSGY-YCASGDVHGNVRIW---DTTQTTHILKTTIP 99
Query: 62 GHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 121
S + DI S+ + + T + + +
Sbjct: 100 VFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRP 159
Query: 122 VSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL- 180
F N + S G D + ++N
Sbjct: 160 FRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGV 219
Query: 181 ------TNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-- 232
+ + H+G + +T SPDG+ AS D +W++ K T+
Sbjct: 220 DGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVG 279
Query: 233 --HNDIITALCFSPNR 246
D + ++
Sbjct: 280 TRIEDQQLGIIWTKQA 295
Score = 49.5 bits (116), Expect = 2e-07
Identities = 30/268 (11%), Positives = 67/268 (25%), Gaps = 21/268 (7%)
Query: 109 VLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVS 168
+ + + +I + ++ + T + HS + + SP+ S
Sbjct: 20 AVVLGNTPAGDKIQYCN-GTSVYTVP-VGSLTDTEIYTEHSHQTTVAKTSPSGY--YCAS 75
Query: 169 AGWDRMVKVW--NLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGK 226
V++W T LK +G + ++ + A+ G+
Sbjct: 76 GDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDT 135
Query: 227 HLHTLVHNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVL 286
A+ + + + + F
Sbjct: 136 GTSNGNLTGQARAMNSVDFKPSRPF-------------RIISGSDDNTVAIFEGPPFKFK 182
Query: 287 SVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADPPM 346
S +T + + D + +
Sbjct: 183 STFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVF 242
Query: 347 CLSLAWSTDGQTLFAGYSDNTIRVWQVS 374
L WS DG + + +D TI++W V+
Sbjct: 243 GL--TWSPDGTKIASASADKTIKIWNVA 268
Score = 44.1 bits (102), Expect = 1e-05
Identities = 12/91 (13%), Positives = 25/91 (27%), Gaps = 1/91 (1%)
Query: 133 WNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGH 192
T + S + + I SA D+ +K+WN+ K++
Sbjct: 220 DGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVG 279
Query: 193 TGYLNTVT-VSPDGSLCASGGKDMNAMLWDL 222
T + + S + +
Sbjct: 280 TRIEDQQLGIIWTKQALVSISANGFINFVNP 310
Score = 43.7 bits (101), Expect = 2e-05
Identities = 10/65 (15%), Positives = 21/65 (32%), Gaps = 6/65 (9%)
Query: 30 DTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV-LSSDGNYALSGSWDKTL 88
I S S D T+ IW + +K + + + + +S S + +
Sbjct: 251 TKIASASADKTIKIW-----NVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFI 305
Query: 89 RLWDL 93
+
Sbjct: 306 NFVNP 310
Score = 29.5 bits (64), Expect = 0.58
Identities = 6/43 (13%), Positives = 14/43 (32%)
Query: 2 STETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIW 44
+ TL++ T+ Q ++S S + +
Sbjct: 266 NVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFV 308
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 78.0 bits (190), Expect = 1e-16
Identities = 41/362 (11%), Positives = 88/362 (24%), Gaps = 52/362 (14%)
Query: 30 DTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWD--KT 87
D I SR I I + D A
Sbjct: 16 DLIAFVSRGQAFIQDVSGT--------YVLKVPEPLRIRYVRRGGDTKVAFIHGTREGDF 67
Query: 88 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTI---- 143
L ++D GK +FE++ +V ++ + + V ++ I + I
Sbjct: 68 LGIYDYRTGKA-EKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSR 126
Query: 144 ---VEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVT 200
+ D S + + V+++ + + +
Sbjct: 127 EAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDM-EGRKIFAATTENSHDYAPA 185
Query: 201 VSPDGSLCASGGKDMNAMLWDLNDGKHLHTL--------VHNDIITALCFSPNRSF-QKI 251
D D + + P +
Sbjct: 186 FDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAG 245
Query: 252 KLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNT 311
+ D++ ++S+ I +M P S + + +
Sbjct: 246 EYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKY-- 303
Query: 312 LAHCKFTIVDLETKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVW 371
D++T+K V E++ ++ L S D +T+ D I +
Sbjct: 304 ---------DVKTRK-VTEVKNNL------------TDLRLSADRKTVMVRKDDGKIYTF 341
Query: 372 QV 373
+
Sbjct: 342 PL 343
Score = 69.5 bits (168), Expect = 9e-14
Identities = 16/236 (6%), Positives = 45/236 (19%), Gaps = 22/236 (9%)
Query: 12 LNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLK---GHSHFIS 68
+T + + + + Y + +++ +
Sbjct: 123 ERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDY 182
Query: 69 DIVLSSDGNYALSGSWDKTLRLWDLAAGKTT-------RRFEDHTKDVLSVAFSVDNRQI 121
+D S+ D + +
Sbjct: 183 APAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTS 242
Query: 122 VSSSRDKTIKLWNTLAHC------KFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMV 175
+ D + + I + S A ++
Sbjct: 243 EAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAA--YYQGAPEKGVL 300
Query: 176 KVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTL 231
+++ K+ L + +S D D + L + T+
Sbjct: 301 LKYDVKTRKVT----EVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDERTV 352
Score = 66.4 bits (160), Expect = 1e-12
Identities = 28/333 (8%), Positives = 84/333 (25%), Gaps = 30/333 (9%)
Query: 14 GHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLS 73
+ + + ++ + + + + +
Sbjct: 40 PEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYR----TGKAEKFEENLGNVFAMGVD 94
Query: 74 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLW 133
+G +A+ + + DL GK T + S ++R I K +
Sbjct: 95 RNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETD 154
Query: 134 NTLA------HCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKI 187
+ + + ++ + + + + + + +
Sbjct: 155 GYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSF 214
Query: 188 NHS-------GHTGYLNTVTVSPDGSLCASG-----GKDMNAMLWDLNDGKHLHTLVHND 235
G N + P +G + +++ G + +
Sbjct: 215 EVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLES 274
Query: 236 IITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNR 295
I + F +K L+ Y + K+ + ++ + S D +
Sbjct: 275 SILIYSVPVHGEFAAYYQGAP---EKGVLLKYDVKTRKVTE----VKNNLTDLRLSADRK 327
Query: 296 QIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMV 328
++ D I + V+ + + +V
Sbjct: 328 TVMVRKDDGKIYTFPLEKPEDERTVETDKRPLV 360
Score = 64.9 bits (156), Expect = 3e-12
Identities = 15/126 (11%), Positives = 31/126 (24%), Gaps = 5/126 (3%)
Query: 11 TLNGHNGWVTQIATNPKF-PDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISD 69
+ G P+ ++ D L+ S
Sbjct: 222 VIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSV 281
Query: 70 IVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKT 129
V Y L +D+ TR+ + ++ + S D + ++ D
Sbjct: 282 PVHGEFAAYYQGAPEKGVLLKYDVK----TRKVTEVKNNLTDLRLSADRKTVMVRKDDGK 337
Query: 130 IKLWNT 135
I +
Sbjct: 338 IYTFPL 343
Score = 50.6 bits (119), Expect = 1e-07
Identities = 10/100 (10%), Positives = 29/100 (29%), Gaps = 10/100 (10%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
L + L+ + + +++ + ++D+
Sbjct: 271 PLESSILIYSVPVHGEFA-AYYQGAPEKGVLLKYDVKT---------RKVTEVKNNLTDL 320
Query: 71 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVL 110
LS+D + D + + L + R E + ++
Sbjct: 321 RLSADRKTVMVRKDDGKIYTFPLEKPEDERTVETDKRPLV 360
Score = 49.1 bits (115), Expect = 4e-07
Identities = 27/310 (8%), Positives = 63/310 (20%), Gaps = 25/310 (8%)
Query: 74 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLW 133
DG+ S + + D++ + + V D + + L
Sbjct: 13 LDGDLIAFVSRGQ-AFIQDVSGTYVLKV--PEPLRIRYVRRGGDTKVAFIHGTREGDFLG 69
Query: 134 NTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINH---- 189
+ + V + N + ++ + ++ M +
Sbjct: 70 IYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAM 129
Query: 190 ----SGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCFSPN 245
+ P G ++D+ K N A F +
Sbjct: 130 ITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDAD 189
Query: 246 RSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRD-VLSVAFSVDNRQIVSSSRDK 304
S ++L + L + + D
Sbjct: 190 SKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDL 249
Query: 305 TIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYS 364
+ VD +M+ L ++ S
Sbjct: 250 NDMYKRSSPIN----VDPGDYRMIIPLESSILIYS---------VPVHGEFAAYYQGAPE 296
Query: 365 DNTIRVWQVS 374
+ + V
Sbjct: 297 KGVLLKYDVK 306
Score = 26.4 bits (56), Expect = 7.1
Identities = 11/91 (12%), Positives = 26/91 (28%), Gaps = 26/91 (28%)
Query: 287 SVAFS-VDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADPP 345
+ FS +D I SR + I D+ +++ P +
Sbjct: 7 AEDFSPLDGDLIAFVSRGQAF------------IQDVSGTYVLKVPEPLRIR-------- 46
Query: 346 MCLSLAWSTDGQTLFAGYSD--NTIRVWQVS 374
+ D + F + + + ++
Sbjct: 47 ---YVRRGGDTKVAFIHGTREGDFLGIYDYR 74
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 74.6 bits (181), Expect = 1e-15
Identities = 37/319 (11%), Positives = 98/319 (30%), Gaps = 26/319 (8%)
Query: 57 QKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFED-HTKDVLSVAFS 115
+ GH+ I+ + S+DG S + + WD++ G + R F D H + +
Sbjct: 5 DQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKT- 63
Query: 116 VDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMV 175
+ + S D +K+ + + + + + I V+A + +
Sbjct: 64 TSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIA 123
Query: 176 KVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHND 235
+ ++ I+++ L+ + + G + +
Sbjct: 124 IYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQ------DSKVHVYKLSGASVSEVKTIV 177
Query: 236 IITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNR 295
+ + + ++ + + + V V++S DN
Sbjct: 178 HPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNV 237
Query: 296 QIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADPPMCLSLAWSTD 355
++ + S D ++ +W ++ + A ++ +
Sbjct: 238 RLATGSLDNSVIVW-----------NMNKPSDHPIII-------KGAHAMSSVNSVIWLN 279
Query: 356 GQTLFAGYSDNTIRVWQVS 374
T+ + D+ I+ W V
Sbjct: 280 ETTIVSAGQDSNIKFWNVP 298
Score = 58.8 bits (140), Expect = 2e-10
Identities = 41/307 (13%), Positives = 92/307 (29%), Gaps = 16/307 (5%)
Query: 7 QLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRL-KGHSH 65
+ GHN +T ++++ T+ S + + W D + G+ + H+
Sbjct: 3 SIDQVRYGHNKAITALSSSAD-GKTLFSADAEGHINSW-----DISTGISNRVFPDVHAT 56
Query: 66 FISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSS 125
I+ I +S G+ D + +G + + + + +V ++ +
Sbjct: 57 MITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVA 116
Query: 126 RDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKL 185
+ + + E S SCV S + Q + V + +
Sbjct: 117 ACY----KHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSE 172
Query: 186 KINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCFSPN 245
+ + L A+ N+ + HT +
Sbjct: 173 VKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSW 232
Query: 246 RSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLF--RDVLSVAFSVDNRQIVSSSRD 303
S +++I++ +N ++ ++ IVS+ +D
Sbjct: 233 SPDNVRLATGSL---DNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQD 289
Query: 304 KTIKLWN 310
IK WN
Sbjct: 290 SNIKFWN 296
Score = 47.3 bits (110), Expect = 1e-06
Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 3/79 (3%)
Query: 15 HNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSS 74
+ + + + S DN++I+W + + P H+ + V+
Sbjct: 222 FHTAKVACVSWSPDNVRLATGSLDNSVIVWNM---NKPSDHPIIIKGAHAMSSVNSVIWL 278
Query: 75 DGNYALSGSWDKTLRLWDL 93
+ +S D ++ W++
Sbjct: 279 NETTIVSAGQDSNIKFWNV 297
Score = 36.5 bits (82), Expect = 0.003
Identities = 6/40 (15%), Positives = 19/40 (47%)
Query: 272 GKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNT 311
G ++ + + + +++ S D + + S+ + I W+
Sbjct: 2 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDI 41
Score = 28.0 bits (60), Expect = 1.9
Identities = 7/47 (14%), Positives = 14/47 (29%), Gaps = 1/47 (2%)
Query: 1 MSTETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLT 47
M+ + H TI+S +D+ + W +
Sbjct: 253 MNKPSDHPIIIKGAHAMSSVNSVIWLN-ETTIVSAGQDSNIKFWNVP 298
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 75.3 bits (183), Expect = 1e-15
Identities = 55/437 (12%), Positives = 122/437 (27%), Gaps = 126/437 (28%)
Query: 11 TLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKL-TRDDTNYGVPQKRLKGHSHFISD 69
H+ + ++ F +SCS D L +W D+ N H +
Sbjct: 9 AGKAHDADIFSVSACNSF---TVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHH 65
Query: 70 IVL-------SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVL----------SV 112
+ + + + + S+ L + + T++ D+L ++
Sbjct: 66 VDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWAL 125
Query: 113 AFSVD-----NRQIVSSSRDKTIKLWN-----------------TLAHCKFTIVEDGHSD 150
+ + ++V++ T +W TL S
Sbjct: 126 KWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQ 185
Query: 151 WVSCVRFSPNHQNPIIVSAGWDRMVKVWN------LTNCKLKINHSGHTGYLNTVTVSPD 204
+ + V S +I + + V++ L N + + + ++ + +V SP
Sbjct: 186 FATSVDISERG---LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQ 242
Query: 205 GSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCFSPNRSFQKIKLDISRTLQKSNL 264
GSL A + L + + + +
Sbjct: 243 GSLLAIAHDSNSFGCITLYETEFGERIGSLSV---------------------------- 274
Query: 265 ILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLET 324
P + + F+ V+S++F+ + S+ D ++ W D++T
Sbjct: 275 ---PTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFW-----------DVKT 320
Query: 325 KKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGY--------------------- 363
K+ + L LA G +L
Sbjct: 321 KERITTLN-----MHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNE 375
Query: 364 ------SDNTIRVWQVS 374
D +IR ++ +
Sbjct: 376 SLCCVCLDRSIRWFREA 392
Score = 65.6 bits (158), Expect = 2e-12
Identities = 32/321 (9%), Positives = 80/321 (24%), Gaps = 51/321 (15%)
Query: 98 TTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNT-----LAHCKFTIVEDGHSDWV 152
T + H D+ SV+ N VS S D +K+W+ + H +
Sbjct: 6 TANAGKAHDADIFSVSAC--NSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGL 63
Query: 153 SCVRFSP-----NHQNPIIVSAGWDRMVKVWNLTNCKLK----------INHSGHTGYLN 197
V + ++ + + + + +T ++
Sbjct: 64 HHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFW 123
Query: 198 TVTVSPDG-----SLCASGGKDMNAMLWDLNDGKHLHTLV-------------------H 233
+ + +W + +
Sbjct: 124 ALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTP 183
Query: 234 NDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVD 293
+ T++ S + + + + + + N + + + SV FS
Sbjct: 184 SQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINN-SNSIRSVKFSPQ 242
Query: 294 NRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADPPMCLSLAWS 353
+ + + + + + +SL+++
Sbjct: 243 GSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSW----VMSLSFN 298
Query: 354 TDGQTLFAGYSDNTIRVWQVS 374
G+TL + D +R W V
Sbjct: 299 DSGETLCSAGWDGKLRFWDVK 319
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 74.1 bits (180), Expect = 3e-15
Identities = 35/351 (9%), Positives = 83/351 (23%), Gaps = 44/351 (12%)
Query: 67 ISDIVLSSDGNYALSGSWDKTLRLWDLAAGK--TTRRFEDHTKDVLSVAFSVDNRQIVSS 124
IS + D + + +++ + K ++H V V ++ D+ +IV+
Sbjct: 10 ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTC 69
Query: 125 SRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCK 184
D+ +W + + R++ +
Sbjct: 70 GTDRNAYVWTL-KGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQEN 128
Query: 185 LKINHSGHTGY----LNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITAL 240
+ ++ P+ L A+G D ++ + + +
Sbjct: 129 DWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKM 188
Query: 241 CFSPNRSFQKIKLDISRTL-------------QKSNLILYPINHGKMETPFFSLFRDVLS 287
F + S + L + S +L+
Sbjct: 189 PFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLA 248
Query: 288 VAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELRPDV-----------V 336
V F ++ + + + A K + R
Sbjct: 249 VTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKA 308
Query: 337 SQSTKADPPMCL---------SLAWSTDGQT----LFAGYSDNTIRVWQVS 374
S A L ++ + G+ D + +W V
Sbjct: 309 SSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVR 359
Score = 70.3 bits (170), Expect = 6e-14
Identities = 42/336 (12%), Positives = 86/336 (25%), Gaps = 40/336 (11%)
Query: 1 MSTETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRL 60
S L HNG VT + P + I++C D +W L + R+
Sbjct: 36 KSGNKWVQVHELKEHNGQVTGVDWAPD-SNRIVTCGTDRNAYVWTLKGRTWKPTLVILRI 94
Query: 61 KGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLA-AGKTTRRFEDHTKDVLSVAFSVDNR 119
+ + + VLS+ + ++
Sbjct: 95 NRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSV 154
Query: 120 QIVSSSRDKTIKLWNT-----------------LAHCKFTIVEDGHSDWVSCVRFSPNHQ 162
+ + S D ++++ + + WV V +
Sbjct: 155 LLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGV--CFSAN 212
Query: 163 NPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDL 222
+ D V + + + T L VT + SL A+G D +L+
Sbjct: 213 GSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGH-DCFPVLFTY 271
Query: 223 NDGKHLHTLV----HNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPF 278
+ + + + FQ + S + H
Sbjct: 272 DSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKN----- 326
Query: 279 FSLFRDVLSVAFSVD----NRQIVSSSRDKTIKLWN 310
V ++ Q ++ D + +W+
Sbjct: 327 -----SVSQISVLSGGKAKCSQFCTTGMDGGMSIWD 357
Score = 64.1 bits (154), Expect = 6e-12
Identities = 22/186 (11%), Positives = 56/186 (30%), Gaps = 11/186 (5%)
Query: 1 MSTETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRL 60
+L + GWV + + S D+T+ + D + + L
Sbjct: 186 SKMPFGELMFESSSSCGWVHGVC-FSANGSRVAWVSHDSTVCLA-----DADKKMAVATL 239
Query: 61 KGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ 120
+ + + ++ + +G D L+ + F + +
Sbjct: 240 ASETLPLLAVTFITESSLVAAGH-DCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTAR 298
Query: 121 IVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPI--IVSAGWDRMVKVW 178
+ DK + A ++ H + VS + + + G D + +W
Sbjct: 299 ERFQNLDKKASSEGSAAA--GAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIW 356
Query: 179 NLTNCK 184
++ + +
Sbjct: 357 DVRSLE 362
Score = 48.3 bits (113), Expect = 7e-07
Identities = 25/171 (14%), Positives = 50/171 (29%), Gaps = 9/171 (5%)
Query: 60 LKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 119
++ + S++G+ S D T+ L D T +L+V F ++
Sbjct: 197 SSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESS 256
Query: 120 QIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWN 179
+ + + A K + G D + S D+
Sbjct: 257 LVAAGHDCFPVLFTYDSAAGKLSFG--GRLDVPK--QSSQRGLTARERFQNLDKKASSEG 312
Query: 180 LTNCKLKINHSGHTGYLNTVTVSPDGSLC----ASGGKDMNAMLWDLNDGK 226
S H ++ ++V G + G D +WD+ +
Sbjct: 313 SAA-AGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLE 362
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 72.3 bits (175), Expect = 9e-15
Identities = 35/324 (10%), Positives = 93/324 (28%), Gaps = 33/324 (10%)
Query: 66 FISDIVLSSDGNYALSGSWDKT-LRLWDLAAGKTTRRFE---DHTKDVLSVAFS--VDNR 119
F + + N +R D K + + V +V FS ++
Sbjct: 19 FTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQ 78
Query: 120 QIVSSSRDKTIKLWNTLAHCKFTI-------VEDGHSDWVSCVRFSPNHQNPIIVSAGWD 172
+ S + +W + + +S + + + +V G D
Sbjct: 79 YLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRD 138
Query: 173 RMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV 232
+ + SGH+ +N + + + D ++++
Sbjct: 139 NFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASD 198
Query: 233 HNDI---ITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVA 289
+ + + + + S K + +
Sbjct: 199 RTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFAL 258
Query: 290 FSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADPPMCLS 349
+D+++ + D TI++W D+ T K V++ D + +
Sbjct: 259 SWLDSQKFATVGADATIRVW-----------DVTTSKCVQKWTLD-----KQQLGNQQVG 302
Query: 350 LAWSTDGQTLFAGYSDNTIRVWQV 373
+ + +G+ + + D T+ +++
Sbjct: 303 VVATGNGR-IISLSLDGTLNFYEL 325
Score = 53.8 bits (127), Expect = 1e-08
Identities = 17/125 (13%), Positives = 45/125 (36%), Gaps = 5/125 (4%)
Query: 13 NGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVL 72
+ +V + +P + +++ D + + + + + +
Sbjct: 202 HKQGSFVRDVEFSPDSGEFVITVGSDRKISCFD--GKSGEFLKYIEDDQEPVQGGIFALS 259
Query: 73 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV---DNRQIVSSSRDKT 129
D + D T+R+WD+ K +++ + + + V N +I+S S D T
Sbjct: 260 WLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGT 319
Query: 130 IKLWN 134
+ +
Sbjct: 320 LNFYE 324
Score = 53.4 bits (126), Expect = 2e-08
Identities = 33/313 (10%), Positives = 84/313 (26%), Gaps = 21/313 (6%)
Query: 15 HNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV--- 71
+ T ++ +P + I + + + D + P + GH + V
Sbjct: 16 QRNFTTHLSYDPT-TNAIAYPCGKSAFV--RCLDDGDSKVPPVVQFTGHGSSVVTTVKFS 72
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRF--------EDHTKDVLSVAFSVDNRQIVS 123
Y SG + +W K + + + +++ + R++
Sbjct: 73 PIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCV 132
Query: 124 SSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNC 183
+ ++ E + ++ G D V +
Sbjct: 133 VGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPF 192
Query: 184 KLKINHS---GHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITAL 240
K + ++ V SPD + + +D
Sbjct: 193 KFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQ 252
Query: 241 CFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSV---DNRQI 297
S+ + + + + ++ + K + + + + V N +I
Sbjct: 253 GGIFALSWLDSQKFATVGADAT-IRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRI 311
Query: 298 VSSSRDKTIKLWN 310
+S S D T+ +
Sbjct: 312 ISLSLDGTLNFYE 324
Score = 51.8 bits (122), Expect = 5e-08
Identities = 36/259 (13%), Positives = 67/259 (25%), Gaps = 15/259 (5%)
Query: 2 STETLQLRGTLNGHNG-WVTQIATNPKFPDTIL-SCSRDNTLIIWKLTRDD---TNYGVP 56
+ GH VT + +P L S +I+W T D +
Sbjct: 48 GDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNV 107
Query: 57 QKRLKGHSHFISDIVLSSDGNYALSGSW--DKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 114
+ + + ISDI +G D +G + H++ + +
Sbjct: 108 KSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHL 167
Query: 115 SVDNRQIVSSSRDKTIKLWNTLAHCKFTIVED---GHSDWVSCVRFSPNHQN--PIIVSA 169
+ D ++ KF+ + +V V FSP+ + S
Sbjct: 168 KQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSD 227
Query: 170 GWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLH 229
+ K + D A+ G D +WD+ K +
Sbjct: 228 RKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQ 287
Query: 230 TLV---HNDIITALCFSPN 245
+
Sbjct: 288 KWTLDKQQLGNQQVGVVAT 306
Score = 50.3 bits (118), Expect = 2e-07
Identities = 23/218 (10%), Positives = 55/218 (25%), Gaps = 4/218 (1%)
Query: 9 RGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFIS 68
+ G ++ I+ + + + + ++ + G + +
Sbjct: 108 KSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHL 167
Query: 69 DIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDK 128
+ + R V V FS D+ + V +
Sbjct: 168 KQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSD 227
Query: 129 TIK-LWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKI 187
++ + +ED + + + G D ++VW++T K
Sbjct: 228 RKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQ 287
Query: 188 NHSGHTGYLNTVTVS---PDGSLCASGGKDMNAMLWDL 222
+ L V S D ++L
Sbjct: 288 KWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL 325
Score = 30.3 bits (66), Expect = 0.34
Identities = 11/46 (23%), Positives = 19/46 (41%)
Query: 1 MSTETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKL 46
++T + TL+ Q+ I+S S D TL ++L
Sbjct: 280 VTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL 325
>gi|206564140|ref|YP_002234903.1|(51-382:385) putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|198040180|emb|CAR56163.1| putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|194561004|ref|YP_002096029.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|124876520|gb|EAY66510.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|170737581|ref|YP_001778841.1| amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|169819769|gb|ACA94351.1| Amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|78061451|ref|YP_371359.1| amine dehydrogenase
[Burkholderia sp. 383] gi|77969336|gb|ABB10715.1|
Amine dehydrogenase [Burkholderia sp. 383]
gi|107025662|ref|YP_623173.1| amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116693156|ref|YP_838689.1| amine dehydrogenase
[Burkholderia cenocepacia HI2424]
gi|105895036|gb|ABF78200.1| Amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116651156|gb|ABK11796.1| Amine dehydrogenase
[Burkholderia cenocepacia HI2424] E=8e-14 s/c=0.25
id=29% cov=82%
Length = 321
Score = 71.2 bits (173), Expect = 2e-14
Identities = 30/330 (9%), Positives = 74/330 (22%), Gaps = 53/330 (16%)
Query: 3 TETLQLRGTLNGHNGWV-------TQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGV 55
+ +L G ++G G + +R + + I D
Sbjct: 5 ADAKKLLGQIDGGFGPGFAIAPDRKASVVATTYFSRGSHGTRTDVVEII-----DNTTLD 59
Query: 56 PQKRLKGHSHFISDIVLSS------DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 109
+ + + DG + + + A E T
Sbjct: 60 HAGEIVIPAKHAQHVPSPYNTAFSADGKRLYVANITPAASVTVIDAVSKKMLSEIDT--A 117
Query: 110 LSVAFSVD-NRQIVSSSRD-KTIKLWNTLAHCKFTIVED--GHSDWVSCVRFSPNHQNPI 165
V + + + K + + + + +
Sbjct: 118 ACVLAYPAGDDRFTALCESGKALTVTLDANGKEAKRTMSDAFIDVDKDPAFVNASRYKGD 177
Query: 166 IVSAGWDRMVKVWNLTNCKLKI--NHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLN 223
+ + V+ + + K S T P G + N ++
Sbjct: 178 YLFTTYGGNVRSADFSGDKPAFGKPWSLLTDAERAEGWRPGGMQQTAVQAKQNRYYVLMH 237
Query: 224 DGKHLHTLVHNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFR 283
G H D T + +S Q++
Sbjct: 238 KGTDGS---HKDPGTQVWVYDLKSKQRVARWDLA---------------------QQKVE 273
Query: 284 DVLSVAFSVDNRQ--IVSSSRDKTIKLWNT 311
++S+ S D++ ++ + + +
Sbjct: 274 PLVSIQVSEDDKPLFYGLTATSDLV-VMDA 302
Score = 68.9 bits (167), Expect = 1e-13
Identities = 29/274 (10%), Positives = 63/274 (22%), Gaps = 62/274 (22%)
Query: 3 TETLQLRGTLNGHNGWVTQIATNPKFPD-----TILSCSRDNTLIIWKLTRDDTNYGVPQ 57
TL G + + + + + + +
Sbjct: 55 NTTLDHAGEIVIPAKHAQHVPSPYNTAFSADGKRLYVANITPAASVTVID---------A 105
Query: 58 KRLKGHSHF--ISDIVLSSDGNYAL-SGSWD-KTLRLWDLAAGKTTRR-FEDHTKDVLSV 112
K S + ++ G+ + K L + A GK +R D DV
Sbjct: 106 VSKKMLSEIDTAACVLAYPAGDDRFTALCESGKALTVTLDANGKEAKRTMSDAFIDVDKD 165
Query: 113 AFSVDN----RQIVSSSRDKTIKLWNTLAH-CKFTIVEDGHSDWVSCVRFSP-------- 159
V+ + ++ ++ + F +D + P
Sbjct: 166 PAFVNASRYKGDYLFTTYGGNVRSADFSGDKPAFGKPWSLLTDAERAEGWRPGGMQQTAV 225
Query: 160 -----------------NHQNP---IIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTV 199
+H++P + V + + L ++
Sbjct: 226 QAKQNRYYVLMHKGTDGSHKDPGTQVWVYDLKSKQRVARWDLAQQK-------VEPLVSI 278
Query: 200 TVSPDGS--LCASGGKDMNAMLWDLNDGKHLHTL 231
VS D + ++ D G H
Sbjct: 279 QVSEDDKPLFYGLTATS-DLVVMDARTGALQHVE 311
Score = 26.9 bits (58), Expect = 4.2
Identities = 6/66 (9%), Positives = 18/66 (27%), Gaps = 21/66 (31%)
Query: 319 IVDLETKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFA----------GYSDNTI 368
+ D + KK++ ++ A + D + G + +
Sbjct: 2 VYDADAKKLLGQIDGGFGP-----------GFAIAPDRKASVVATTYFSRGSHGTRTDVV 50
Query: 369 RVWQVS 374
+ +
Sbjct: 51 EIIDNT 56
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Paracoccus
denitrificans [TaxId: 266]}
Length = 432
Score = 67.9 bits (165), Expect = 4e-13
Identities = 35/363 (9%), Positives = 88/363 (24%), Gaps = 55/363 (15%)
Query: 34 SCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDL 93
+ + + D + + L + + LS+ G Y D + + DL
Sbjct: 37 TLRDAGQIALI-----DGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDL 90
Query: 94 AAGKTTRRFE-----DHTKDVLSVAFSVDNRQ-IVSSSRDKTIKLWNTLAHCKFTI---- 143
+ T E + S +++ I + + + I
Sbjct: 91 WMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTR 150
Query: 144 ------VEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCK-LKINHSGHTGYL 196
E V+ + S IV+ + + + T+ LK +L
Sbjct: 151 GMTYDEQEYHPEPRVAAILASHYRPE-FIVNVKETGKILLVDYTDLNNLKTTEISAERFL 209
Query: 197 NTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLV-HNDIITALCFSPNRSFQKIKLDI 255
+ + + N ++ L + N
Sbjct: 210 HDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVW 269
Query: 256 SRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHC 315
+ + + + G +L ++ + + + L+
Sbjct: 270 ATSHMGDDSV---ALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLY------ 320
Query: 316 KFTIVDLETKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVSV 375
V + + + S+A D + + SD + ++
Sbjct: 321 --------------------VDATLNPEAEISGSVA-VFDIKAMTGDGSDPEFKTLPIAE 359
Query: 376 TSR 378
+
Sbjct: 360 WAG 362
Score = 59.0 bits (142), Expect = 3e-10
Identities = 31/321 (9%), Positives = 71/321 (22%), Gaps = 26/321 (8%)
Query: 3 TETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKG 62
T +++ L+ V + + RD + + L + K
Sbjct: 49 GSTYEIKTVLDTGYA-VHISRLSAS-GRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSE 106
Query: 63 HSHFISDIVLSSDGNYAL-SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ- 120
+ + + YA+ W + D + + + + R
Sbjct: 107 ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVA 166
Query: 121 -----------IVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSA 169
IV+ I L + E ++ +H+ I +A
Sbjct: 167 AILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRY-FITAA 225
Query: 170 GWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLH 229
+ V + KL G + G + D
Sbjct: 226 NARNKLVVIDTKEGKLVAIE-DTGGQTPHPGRGANFVHPTFGPVWAT---SHMGDDSVAL 281
Query: 230 TLVHNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVA 289
+ + + +L +P + + ++
Sbjct: 282 IGTDPEGHPDNAW---KILDSFPALGGGSLFIKT---HPNSQYLYVDATLNPEAEISGSV 335
Query: 290 FSVDNRQIVSSSRDKTIKLWN 310
D + + D K
Sbjct: 336 AVFDIKAMTGDGSDPEFKTLP 356
Score = 39.8 bits (92), Expect = 4e-04
Identities = 23/139 (16%), Positives = 41/139 (29%), Gaps = 22/139 (15%)
Query: 16 NGWVTQIATNP-KFPDTILSCSRD----NTLIIWKLTRDDTNYGVPQKRLKGHSHFISDI 70
+ V I T+P PD ++ T ++ Y L + IS
Sbjct: 276 DDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAE-ISGS 334
Query: 71 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSS----- 125
V D D + +A + V+ F+ D ++ S
Sbjct: 335 VAVFDIKAMTGDGSDPEFKTLPIA---EWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKD 391
Query: 126 --------RDKTIKLWNTL 136
DKT++L + +
Sbjct: 392 QESALVVVDDKTLELKHVI 410
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 66.0 bits (159), Expect = 1e-12
Identities = 37/322 (11%), Positives = 79/322 (24%), Gaps = 26/322 (8%)
Query: 73 SSDGNYAL-----SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI------ 121
+ D + + D AG+ + + + + D I
Sbjct: 10 APDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGG--FLPNPVVADDGSFIAHASTV 67
Query: 122 ----VSSSRDKTIKLWNTLAHCKFTIVEDGHS------DWVSCVRFSPNHQNPIIVSAGW 171
R +++++ + +E + + +P+ + +
Sbjct: 68 FSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSP 127
Query: 172 DRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTL 231
V V +L K Y T + G + HT
Sbjct: 128 APAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTE 187
Query: 232 VHNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFS 291
V + L P S + +L K + I K +L + +
Sbjct: 188 VFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWR 247
Query: 292 VDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADPPMCLSLA 351
Q V+ R ++ +V + + + S+
Sbjct: 248 PGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHE-IDSIN 306
Query: 352 WSTDGQTLF--AGYSDNTIRVW 371
S D + L D T+ +
Sbjct: 307 VSQDEKPLLYALSTGDKTLYIH 328
Score = 60.2 bits (144), Expect = 1e-10
Identities = 22/217 (10%), Positives = 54/217 (24%), Gaps = 21/217 (9%)
Query: 10 GTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGV-PQKRLKGHSHFIS 68
P PDT RD +L + T + I+
Sbjct: 139 KAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLIN 198
Query: 69 DIVLSSDGNYALSGSWDKTLRLWDLAAGKTT--RRFEDHTKDVLSVAFSVDNRQIVSSSR 126
S + ++ + DL++G E T+ + + Q V+ R
Sbjct: 199 HPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHR 258
Query: 127 DKTIKLWNTLAHCKFTIVEDG------------------HSDWVSCVRFSPNHQNPIIVS 168
++ + + S + + +
Sbjct: 259 ALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYAL 318
Query: 169 AGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDG 205
+ D+ + + + + + + + +T + G
Sbjct: 319 STGDKTLYIHDAESGEELRSVNQLGHGPQVITTADMG 355
Score = 57.9 bits (138), Expect = 5e-10
Identities = 30/263 (11%), Positives = 66/263 (25%), Gaps = 42/263 (15%)
Query: 3 TETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKG 62
TL + + + T P TL+ ++ + V +
Sbjct: 85 PVTLLPTADIELPDAPRFLVGTYP---WMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAF 141
Query: 63 HSHF-------------ISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 109
+ + DG+ A + T + +
Sbjct: 142 KRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEIT----HTEVFHPEDEFLI 197
Query: 110 LSVAFSVDNRQIVSSSRDKTIKLWNTLAH-CKFTIVEDGHSDWVSCVRFSPNHQNPI--- 165
A+S ++V + I + + KF + ++ + P +
Sbjct: 198 NHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYH 257
Query: 166 ---------------IVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGS--LC 208
R V V + + + ++++ VS D L
Sbjct: 258 RALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGER-LAKFEMGHEIDSINVSQDEKPLLY 316
Query: 209 ASGGKDMNAMLWDLNDGKHLHTL 231
A D + D G+ L ++
Sbjct: 317 ALSTGDKTLYIHDAESGEELRSV 339
Score = 57.5 bits (137), Expect = 8e-10
Identities = 31/321 (9%), Positives = 76/321 (23%), Gaps = 56/321 (17%)
Query: 34 SCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYAL----------SGS 83
+ + D G + G F+ + V++ DG++ G
Sbjct: 23 HFAAVTQQFVI-----DGEAGRVIGMIDGG--FLPNPVVADDGSFIAHASTVFSRIARGE 75
Query: 84 WDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTI 143
+ ++D T E V + + ++
Sbjct: 76 RTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVD 135
Query: 144 VEDG---------------HSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKIN 188
+E + + + V+ G + ++ + ++
Sbjct: 136 LEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSL-AKVAFGTEGTPEITHT-----EVF 189
Query: 189 HSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHL-------------HTLVHND 235
H +N S DL+ G
Sbjct: 190 HPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPG 249
Query: 236 IITALCFSPNRSFQKIKLDISRTLQ---KSNLILYPINHGKMETPFFSLFRDVLSVAFSV 292
+ + + +D + S ++ F + ++ S+ S
Sbjct: 250 GWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQ 309
Query: 293 DNRQ--IVSSSRDKTIKLWNT 311
D + S+ DKT+ + +
Sbjct: 310 DEKPLLYALSTGDKTLYIHDA 330
Score = 34.0 bits (76), Expect = 0.024
Identities = 23/219 (10%), Positives = 48/219 (21%), Gaps = 17/219 (7%)
Query: 166 IVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSL----------CASGGKDM 215
V + ++ G+L V+ DGS A G +
Sbjct: 21 PAHFAAVTQQFVIDGE--AGRVIGMIDGGFLPNPVVADDGSFIAHASTVFSRIARGERTD 78
Query: 216 NAMLWDLNDGKHLHTL-VHNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKM 274
++D + + + + P + Q S + +
Sbjct: 79 YVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEG 138
Query: 275 ETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELRPD 334
+ L F RD ++ I E +E +
Sbjct: 139 KAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLIN 198
Query: 335 VVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQV 373
+ S + + G+ S +
Sbjct: 199 HPAYS----QKAGRLVWPTYTGKIHQIDLSSGDAKFLPA 233
Score = 25.9 bits (55), Expect = 9.8
Identities = 9/105 (8%), Positives = 26/105 (24%), Gaps = 37/105 (35%)
Query: 285 VLSVAFSVDNRQI-----VSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQS 339
+ A + D R++ + + D E +++ + +
Sbjct: 4 RILEAPAPDARRVYVNDPAHFAAVTQQFVI-----------DGEAGRVIGMIDGGFLP-- 50
Query: 340 TKADPPMCLSLAWSTDGQTLFA----------GYSDNTIRVWQVS 374
+ + DG + G + + V+
Sbjct: 51 ---------NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPV 86
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 65.7 bits (159), Expect = 2e-12
Identities = 41/368 (11%), Positives = 93/368 (25%), Gaps = 41/368 (11%)
Query: 34 SCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDL 93
+ + + D + K + + +S+ G Y L D + + DL
Sbjct: 37 TLRDAGQIALV-----DGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDL 90
Query: 94 AAGK-----TTRRFEDHTKDVLSVAFSVDNRQ-IVSSSRDKTIKLWNTLAHCKFTIVEDG 147
A + + + S ++R I + + + IV
Sbjct: 91 WAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTR 150
Query: 148 HSDWVSCVRFSPNHQNPIIVSAGWDRMVK----------VWNLTNCKLKINHSGHTGYLN 197
+ II S + V L + G +L
Sbjct: 151 GMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLA 210
Query: 198 TVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCFSPNRSFQKIKLDISR 257
+ + N + + + L LV N K S
Sbjct: 211 DGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWST 270
Query: 258 TLQKSNLI--------LYPINHGKMETPFFSLFRDVLSVAFSVDNRQI-VSSSRDKTIKL 308
+ I +P K L + + + V ++ + ++
Sbjct: 271 SHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARI 330
Query: 309 WNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADPPMCLSLAWSTDG-QTLFAGYS--- 364
++A + DL+ ++ P + ++ G + F+ ++
Sbjct: 331 SQSVA-----VFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKN 385
Query: 365 -DNTIRVW 371
+ + V
Sbjct: 386 DSSALVVV 393
Score = 60.4 bits (145), Expect = 1e-10
Identities = 35/332 (10%), Positives = 85/332 (25%), Gaps = 18/332 (5%)
Query: 55 VPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 114
V + D+ ++++ + L D + K + + V
Sbjct: 15 VKPEDRPKKQLNDLDL----PNLFSVTLRDAGQIALVDGDSKKIVKVIDTG-YAVHISRM 69
Query: 115 SVDNRQIVSSSRDKTIKLWNTLAHCKFTIVE----DGHSDWVSCVRFSPNHQNPIIVSAG 170
S R ++ RD I + + A + E S I A
Sbjct: 70 SASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYED-RYTIAGAY 128
Query: 171 WDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLC-ASGGKDMNAMLWDLNDGKHLH 229
W + + + K S ++T T P+ + + + ++ + +
Sbjct: 129 WPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVL 188
Query: 230 TLVHNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVA 289
+ + DI S + + + N + ++ V
Sbjct: 189 LVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVG 248
Query: 290 FSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADPPMCLS 349
+ + + K +W+T +I + T + L
Sbjct: 249 KTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLF 308
Query: 350 LAWSTDGQTLFA-------GYSDNTIRVWQVS 374
+ L+ ++ V+ +
Sbjct: 309 IKTHPKSSHLYVDTTFNPDARISQSVAVFDLK 340
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 63.8 bits (153), Expect = 4e-12
Identities = 34/323 (10%), Positives = 90/323 (27%), Gaps = 46/323 (14%)
Query: 56 PQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 115
K + GH+ I+ + ++ +SGS+D + W ++ +DH+ ++S+ S
Sbjct: 5 VLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSM-----HQDHSNLIVSLDNS 55
Query: 116 VDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMV 175
+ + ++ S + + + + D +
Sbjct: 56 KAQE------------YSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDL 103
Query: 176 KVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHND 235
+ + + ++ ++ G + +
Sbjct: 104 LILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRA 163
Query: 236 IITALCFSPN-----RSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAF 290
+ + SP+ K+ + + + +
Sbjct: 164 KPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEE 223
Query: 291 SVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADPPMCLSL 350
++ + + S D I +++ RP + ++ A +L
Sbjct: 224 EIEEDLVATGSLDTNIFIYSV-------------------KRPMKIIKALNAHKDGVNNL 264
Query: 351 AWSTDGQTLFAGYSDNTIRVWQV 373
W T TL + +D I+ W V
Sbjct: 265 LWETPS-TLVSSGADACIKRWNV 286
Score = 58.0 bits (138), Expect = 4e-10
Identities = 42/313 (13%), Positives = 94/313 (30%), Gaps = 36/313 (11%)
Query: 7 QLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHF 66
++ T++GHN +T + NP ++S S D ++ W + HS+
Sbjct: 4 EVLKTISGHNKGITALTVNP-----LISGSYDGRIMEWSS----------SSMHQDHSNL 48
Query: 67 ISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSR 126
I + S Y+ D + + + D V ++
Sbjct: 49 IVSLDNSKAQEYSSISWDDTLKVNG--------ITKHEFGSQPKVASANNDGFTAVLTND 100
Query: 127 DKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLK 186
D + L + + S + + + +
Sbjct: 101 DDLLILQSFTGDIIKS-----VRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSF 155
Query: 187 INHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCFSPNR 246
+ + +++SP + A+G +L+DL + + S
Sbjct: 156 DLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKP 215
Query: 247 SFQKIKLDISRTLQK------SNLILYPINHGKMETPFFSLFRD-VLSVAFSVDNRQIVS 299
+ + + +N+ +Y + + +D V ++ + + +VS
Sbjct: 216 AEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVS 274
Query: 300 SSRDKTIKLWNTL 312
S D IK WN +
Sbjct: 275 SGADACIKRWNVV 287
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 368
Score = 63.5 bits (153), Expect = 8e-12
Identities = 29/343 (8%), Positives = 71/343 (20%), Gaps = 44/343 (12%)
Query: 62 GHSHFISDIVLSSDGN---YALSGSWDKTLRLW--DLAAGKTTRRFEDHTKDVLSVAFSV 116
D + L + T W G T +
Sbjct: 17 ASDGSSCDHGPGAISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLSL--AVAGH 74
Query: 117 DNR----------QIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSC------VRFSPN 160
+ R +++++ + +E + S + +
Sbjct: 75 SGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCAS 134
Query: 161 HQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNT-------VTVSPDGSLCASGGK 213
++ ++ + + S SL AS
Sbjct: 135 SAC-LLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLA 193
Query: 214 DMNAMLWDLNDGKHLHTLVHNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGK 273
A + T N A + + P
Sbjct: 194 AAPAAAGIVGAQ---CTGAQNCSSQAAQANYPGML------VWAVASSILQGDIPAAGAT 244
Query: 274 METPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELRP 333
M+ + F Q+V+ ++ + T+ H + + E V
Sbjct: 245 MKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVG 304
Query: 334 DVVSQSTKADPPMCLSLAWSTDGQTLF--AGYSDNTIRVWQVS 374
+ ++ + DG + + ++ +
Sbjct: 305 QTSGPISNGHDSD--AIIAAQDGASDNYANSAGTEVLDIYDAA 345
Score = 63.1 bits (152), Expect = 1e-11
Identities = 21/328 (6%), Positives = 58/328 (17%), Gaps = 38/328 (11%)
Query: 17 GWVTQIATNPKFPDTILSCSRDNTLIIWKLTRD-DTNYGVPQKRLKGHSHFISD----IV 71
+ L T W G + +
Sbjct: 22 SCDHGPGAISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLSLAVAGHSGSDFAL 81
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVL-------SVAFSVDNRQI-VS 123
S+ + G + ++D E + + +
Sbjct: 82 ASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFF 141
Query: 124 SSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTN- 182
+ +D + SC P + + +
Sbjct: 142 LFGSSAAAGLSV-----PGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAP 196
Query: 183 ----CKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDI-- 236
+ G L + + + N+
Sbjct: 197 AAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGR 256
Query: 237 -----------ITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDV 285
+ A + + L + + S D
Sbjct: 257 KADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDS 316
Query: 286 LSVAFSVDNRQ--IVSSSRDKTIKLWNT 311
++ + D +S+ + + +++
Sbjct: 317 DAIIAAQDGASDNYANSAGTEVLDIYDA 344
Score = 51.9 bits (123), Expect = 6e-08
Identities = 14/198 (7%), Positives = 46/198 (23%), Gaps = 22/198 (11%)
Query: 3 TETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYG-VPQKRLK 61
+ + +P T S +L L G V +
Sbjct: 153 VPGASDDQLTKSASCF----HIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTG 208
Query: 62 GHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 121
+ + G + + A + + + F Q+
Sbjct: 209 AQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQM 268
Query: 122 VSSSRDKTIKLWNTLAHCKFT-----------------IVEDGHSDWVSCVRFSPNHQNP 164
V+ ++ + T+ H + + + + + +
Sbjct: 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASD 328
Query: 165 IIVSAGWDRMVKVWNLTN 182
++ ++ +++ +
Sbjct: 329 NYANSAGTEVLDIYDAAS 346
Score = 40.7 bits (94), Expect = 2e-04
Identities = 10/118 (8%), Positives = 34/118 (28%), Gaps = 16/118 (13%)
Query: 1 MSTETLQLRGTLNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRL 60
+ ++ ++G+ +++ ++ I+ + +
Sbjct: 238 IPAAGATMKAAIDGNESGRKADNFRSAGF-QMVAKLKNTDGIMILTVEHSRSCLAAAENT 296
Query: 61 K-------------GHSHFISDIVLSSDGNYAL--SGSWDKTLRLWDLAAGKTTRRFE 103
+ H I+ + DG + + + L ++D A+ + E
Sbjct: 297 SSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVE 354
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 54.5 bits (129), Expect = 6e-09
Identities = 32/296 (10%), Positives = 81/296 (27%), Gaps = 30/296 (10%)
Query: 81 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI-VSSSRDKTIKLWNTLAHC 139
+ S + + D+ + K T + + S D ++ V+++ + + +T +
Sbjct: 7 ANSESDNISVIDVTSNKVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNN 65
Query: 140 KFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTV 199
V G S V + + V + T+ + L
Sbjct: 66 VIATVPAGSSPQGVAVSPDGKQVYVTNM---ASSTLSVIDTTSNTVAGTVKTGKSPLGLA 122
Query: 200 TVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCFSPNRSFQKIKLDISRTL 259
L + D + + ++T+ + +P+ +
Sbjct: 123 LSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKV---------- 172
Query: 260 QKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTI 319
+ + + + + V+ K ++
Sbjct: 173 ----YVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSM 228
Query: 320 VDLETKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLF-AGYSDNTIRVWQVS 374
+D T K+ + P +A + DG+ ++ A NT+ V +
Sbjct: 229 IDTGTNKITARIPVG----------PDPAGIAVTPDGKKVYVALSFCNTVSVIDTA 274
Score = 53.0 bits (125), Expect = 2e-08
Identities = 33/280 (11%), Positives = 74/280 (26%), Gaps = 15/280 (5%)
Query: 34 SCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYAL-SGSWDKTLRLWD 92
+ S + + + D + S+ V+S DG + + + + D
Sbjct: 7 ANSESDNISVI-----DVTSNKVTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSIID 60
Query: 93 LAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWV 152
A T S + ++ V
Sbjct: 61 TA----TNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGK 116
Query: 153 SCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGG 212
S + + + + T K IN + V+PDG+
Sbjct: 117 SPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVAN 176
Query: 213 KDMNAMLWDLNDGKHLHTLVHNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHG 272
D ++ + + A + + K ++ + N +
Sbjct: 177 FDSMSISVIDTVTNSVI---DTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGT 233
Query: 273 KMETPFFSLFRDVLSVAFSVDNRQI-VSSSRDKTIKLWNT 311
T + D +A + D +++ V+ S T+ + +T
Sbjct: 234 NKITARIPVGPDPAGIAVTPDGKKVYVALSFCNTVSVIDT 273
Score = 37.5 bits (85), Expect = 0.002
Identities = 12/90 (13%), Positives = 26/90 (28%), Gaps = 2/90 (2%)
Query: 15 HNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSS 74
+ P+ + + ++ DT R+ + I ++
Sbjct: 195 TVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPD-PAGIAVTP 253
Query: 75 DGNYAL-SGSWDKTLRLWDLAAGKTTRRFE 103
DG + S+ T+ + D A T
Sbjct: 254 DGKKVYVALSFCNTVSVIDTATNTITATMA 283
Score = 37.2 bits (84), Expect = 0.003
Identities = 16/189 (8%), Positives = 38/189 (20%), Gaps = 2/189 (1%)
Query: 44 WKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFE 103
+ LS DG + K
Sbjct: 95 SSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTV 154
Query: 104 DHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQN 163
+ +A + D ++ ++ D + +
Sbjct: 155 SVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKA 214
Query: 164 PIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGS-LCASGGKDMNAMLWDL 222
+ + V + + K+ + V+PDG + + + D
Sbjct: 215 YVTNVDKYFNTVSMIDTGTNKITARIPVG-PDPAGIAVTPDGKKVYVALSFCNTVSVIDT 273
Query: 223 NDGKHLHTL 231
T+
Sbjct: 274 ATNTITATM 282
Score = 32.9 bits (73), Expect = 0.050
Identities = 9/78 (11%), Positives = 23/78 (29%), Gaps = 22/78 (28%)
Query: 298 VSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQ 357
+++S I + D+ + K+ + + S DG
Sbjct: 6 IANSESDNISVI-----------DVTSNKVTATI----------PVGSNPMGAVISPDGT 44
Query: 358 TLF-AGYSDNTIRVWQVS 374
++ A N + + +
Sbjct: 45 KVYVANAHSNDVSIIDTA 62
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 53.3 bits (126), Expect = 2e-08
Identities = 35/309 (11%), Positives = 81/309 (26%), Gaps = 20/309 (6%)
Query: 81 SGSWDKTLRLWDLAAGK--TTRRFEDHTKDVLSVAFSVDNRQI-VSSSRDKTIKLWN-TL 136
+ + + +W+L T + D V + S D R + V + + +
Sbjct: 9 ASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAP 68
Query: 137 AHCKFTIVEDGHSDWVSC-VRFSPN--HQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHT 193
T + + +AG + ++ + + G
Sbjct: 69 DDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLD 128
Query: 194 GYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCFSPNR----SFQ 249
G + + +L K L+ ++D HL ++ T P +
Sbjct: 129 GCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNE 188
Query: 250 KIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLW 309
+ ++ ++ HG +E ++
Sbjct: 189 QYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACD 248
Query: 310 NTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLF-AGYSDNTI 368
T + V + + +E +Q G+ L AG + I
Sbjct: 249 RTASLITVFSVSEDGSVLSKEGFQPTETQPR--------GFNVDHSGKYLIAAGQKSHHI 300
Query: 369 RVWQVSVTS 377
V+++
Sbjct: 301 SVYEIVGEQ 309
Score = 47.1 bits (110), Expect = 2e-06
Identities = 34/262 (12%), Positives = 73/262 (27%), Gaps = 10/262 (3%)
Query: 122 VSSSRDKTIKLWNTLAHCKFTIVE-DGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNL 180
++S + I +WN T+ + V + SP+ + + V + V + +
Sbjct: 8 IASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRY-LYVGVRPEFRVLAYRI 66
Query: 181 ---TNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDII 237
S G L ++ G G + + + +V
Sbjct: 67 APDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG 126
Query: 238 TALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQI 297
C S N S L + Q + + G + ++ R +
Sbjct: 127 LDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVA----QDPAEVTTVEGAGPRHM 182
Query: 298 VSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADPPMCLSLAWSTD-G 356
V ++ N L + +E ++ + +D + + D
Sbjct: 183 VFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGR 242
Query: 357 QTLFAGYSDNTIRVWQVSVTSR 378
+ + I V+ VS
Sbjct: 243 HLYACDRTASLITVFSVSEDGS 264
Score = 38.7 bits (88), Expect = 8e-04
Identities = 14/92 (15%), Positives = 28/92 (30%), Gaps = 7/92 (7%)
Query: 165 IIVSAGWDRMVKVWNL-TNCKLK-INHSGHTGYLNTVTVSPDGS-LCASGGKDMNAMLWD 221
+ +++ + + VWNL L G + + VSPD L + + +
Sbjct: 6 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYR 65
Query: 222 LNDGKHLHTLVHNDII----TALCFSPNRSFQ 249
+ T + T + F
Sbjct: 66 IAPDDGALTFAAESALPGSLTHISTDHQGQFV 97
>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal
domain {Pseudomonas nautica [TaxId: 2743]}
Length = 441
Score = 43.7 bits (103), Expect = 2e-05
Identities = 35/356 (9%), Positives = 88/356 (24%), Gaps = 71/356 (19%)
Query: 75 DGNYAL-SGSWDKTLRLWDLAAGKTTRR-------------FEDHTKDVL---------- 110
D Y SG +R+ + + + R + +K++L
Sbjct: 9 DEYYGFWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGD 68
Query: 111 -------SVAFSVDNRQI-VSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQ 162
D + + ++ + + I + + +R +
Sbjct: 69 CHHPHISMTDGRYDGKYLFINDKANTRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPK 128
Query: 163 NPIIVSAGWDRMVKVWNLTNCKLKINHSGHT----------------GYLNTVTVSPDGS 206
+ + + + T+ L +++ T G L+ G
Sbjct: 129 TNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDVAWQVIVDGNLDNTDADYTGK 188
Query: 207 LCASGGKDMN-AMLWDLNDGKHLHTLVHNDIITALCFSPNRSFQKIKLD--ISRTLQKSN 263
S + A+ +V ++ +F+ I + +
Sbjct: 189 YATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIGDSKVPVVDGRGES 248
Query: 264 LILYPINHGKMETPFFSLFRDVLSVAFSVDNRQ-IVSSSRDKTIKLWNTLAHCKFTIVDL 322
I K + + S D + I + T+ + + DL
Sbjct: 249 EFTRYIPVPK----------NPHGLNTSPDGKYFIANGKLSPTVSVIAID-----KLDDL 293
Query: 323 ETKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAGYSDNTIRVWQVSVTSR 378
K + + L + G + D+ + W ++ +
Sbjct: 294 FEDK----IELRDTIVAEPELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNIADAIK 345
Score = 43.7 bits (103), Expect = 2e-05
Identities = 22/171 (12%), Positives = 38/171 (22%), Gaps = 30/171 (17%)
Query: 69 DIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDK 128
GN+ G K + + TR I +
Sbjct: 222 IAAAVKAGNFKTIGD-SKVPVVDGRGESEFTRYIPVPKNPHGLNTSPDGKYFIANGKLSP 280
Query: 129 TIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNP-----------IIVSAGWDRMVKV 177
T+ + K + + + + P + D V
Sbjct: 281 TVSVIAI---DKLDDLFEDKIELRDTIVAEPELGLGPLHTTFDGRGNAYTTLFIDSQVCK 337
Query: 178 WNLTNC--------------KLKINHS-GHTGYLNTVTVSPDGSLCASGGK 213
WN+ + KL + + GH T + DG K
Sbjct: 338 WNIADAIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESRDADGKWLVVLSK 388
Score = 31.8 bits (72), Expect = 0.15
Identities = 42/335 (12%), Positives = 79/335 (23%), Gaps = 54/335 (16%)
Query: 63 HSHFISDIVLSSDGNYALSGSW-DKTLRLWDLAAGKTTRRFE-DHTKDVLSVAFSVDNRQ 120
H H IS DG Y + + L KT + + + + + +
Sbjct: 71 HPH-ISMTDGRYDGKYLFINDKANTRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKT 129
Query: 121 -IVSSSRDKTIKLWNTLA-------------------HCKFTIVEDGHSDWVSCVRFSPN 160
V + + I N + ++ DG+ D
Sbjct: 130 NYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDVAWQVIVDGNLDNTD---ADYT 186
Query: 161 HQNPIIVSAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLW 220
+ +R V + + + G+ G + ++
Sbjct: 187 GKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERI--AAAVKAGNFKTIGDSKVP-VVD 243
Query: 221 DLNDGKHLHTL-VHND------------IITALCFSPNRSFQKIKLDISRTLQKSNLILY 267
+ + + V + I SP S + I + L
Sbjct: 244 GRGESEFTRYIPVPKNPHGLNTSPDGKYFIANGKLSPTVSV----IAIDKLDD---LFED 296
Query: 268 PINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVDLETKKM 327
I L L F + D + WN +A +
Sbjct: 297 KIELRDTIVAEPELGLGPLHTTFDGRGNAYTTLFIDSQVCKWN-IADAIKHYNGDRVNYI 355
Query: 328 VEELRPDVVSQSTKADPPMCLSLAWSTDGQTLFAG 362
+ + DV Q + S DG+ L
Sbjct: 356 RQ--KLDVQYQPGHNHASLTESR--DADGKWLVVL 386
>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue
{Nostoc punctiforme [TaxId: 272131]}
Length = 302
Score = 42.7 bits (99), Expect = 4e-05
Identities = 17/163 (10%), Positives = 46/163 (28%), Gaps = 5/163 (3%)
Query: 65 HFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSS 124
F+ ++ + DG ++ + + V +AF+ + + +
Sbjct: 28 TFLENLASAPDGTIFVTNHEVGEIVSIT--PDGNQQIHATVEGKVSGLAFTSNGDLVATG 85
Query: 125 SRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCK 184
+I + + + D + +P + + + + + ++
Sbjct: 86 WNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPS 145
Query: 185 LKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKH 227
I + S A+G K L+ N K
Sbjct: 146 GSIWLEHPML---ARSNSESVFPAANGLKRFGNFLYVSNTEKM 185
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 279
Score = 35.8 bits (81), Expect = 0.006
Identities = 32/276 (11%), Positives = 83/276 (30%), Gaps = 32/276 (11%)
Query: 112 VAFSVDNRQIVSSSRDKTIKLWNT----LAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIV 167
VA + N IV+ + + I++++ D + + V N + I+
Sbjct: 28 VAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVT 87
Query: 168 SAGWDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKH 227
++++N ++ + + VTV G + K M +++D N
Sbjct: 88 ERSPTHQIQIYNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVL 147
Query: 228 LHTLVHNDIITALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDV-- 285
PN K +I + +++ + G+
Sbjct: 148 HKFGCSKH-----LEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGITNYP 202
Query: 286 LSVAFSVDNRQIVSSSR-DKTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADP 344
+ V + + +++ + + + ++ + +K
Sbjct: 203 IGVGINSNGEILIADNHNNFNLTIFTQDGQLISAL-------------------ESKVKH 243
Query: 345 PMCLSLAWSTDGQTLFAGYSDNTIRVWQVSVTSRGG 380
C +A DG + D + +++ + G
Sbjct: 244 AQCFDVALMDDGS-VVLASKDYRLYIYRYVQLAPVG 278
Score = 32.7 bits (73), Expect = 0.058
Identities = 31/257 (12%), Positives = 77/257 (29%), Gaps = 14/257 (5%)
Query: 61 KGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF-----EDHTKDVLSVAFS 115
+G S + +++ + ++ + + ++++D G+ +F D +
Sbjct: 19 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDK-EGRFKFQFGECGKRDSQLLYPNRVAV 77
Query: 116 VDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMV 175
V N + + + + G + + +++ IIV V
Sbjct: 78 VRNSGDIIVTERSPTHQIQIYNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRV 137
Query: 176 KVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHND 235
+++ L V D + + +G++L +
Sbjct: 138 IIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEG 197
Query: 236 IITALCFSPNRSFQKIKLDISRTLQKSNLILYPIN-HGKMETPFFSL--FRDVLSVAFSV 292
I P +I +N L G++ + S VA
Sbjct: 198 I----TNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALESKVKHAQCFDVALMD 253
Query: 293 DNRQIVSSSRDKTIKLW 309
D +V +S+D + ++
Sbjct: 254 DG-SVVLASKDYRLYIY 269
>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26,
N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 470
Score = 34.3 bits (77), Expect = 0.022
Identities = 28/237 (11%), Positives = 67/237 (28%), Gaps = 24/237 (10%)
Query: 12 LNGHNGWVTQIATNPKFPDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIV 71
+ + + P ++L + W T + + L+ ++ +
Sbjct: 235 TDSLSSVTNATSIQITAPASMLIGDHYLCDVTW-----ATQERISLQWLRRIQNYSVMDI 289
Query: 72 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 131
D + SG W+ + + TT ++ + S+ +
Sbjct: 290 CDYDES---SGRWNCLVARQHIE-MSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRH 345
Query: 132 LWNTLAH-CKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRM--------VKVWNLTN 182
+ T + G + + + ++ +S + M +++ + T
Sbjct: 346 ICYFQIDKKDCTFITKGTWEVIGIEALTSDYL--YYISNEYKGMPGGRNLYKIQLSDYTK 403
Query: 183 CK-LKINHSGHTGYLNTVTVSPDGS---LCASGGKDMNAMLWDLNDGKHLHTLVHND 235
L + +V+ S + L SG L + K L L N
Sbjct: 404 VTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVLEDNS 460
Score = 29.7 bits (65), Expect = 0.65
Identities = 25/276 (9%), Positives = 73/276 (26%), Gaps = 28/276 (10%)
Query: 29 PDTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSG------ 82
D ++N ++++ +++ + H I+D +S DG + L
Sbjct: 26 SDHEYLYKQENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQ 85
Query: 83 ---SWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAHC 139
S+ + ++DL + V ++ + D +K+ L
Sbjct: 86 WRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSY 145
Query: 140 KFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGW-------DRMVKVWNLTNCKLKINHSGH 192
+ T + + + SA W + + ++ +
Sbjct: 146 RITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSD 205
Query: 193 TGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVH------------NDIITAL 240
TV + + + + + + + + +
Sbjct: 206 ESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDV 265
Query: 241 CFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMET 276
++ L + ++ Y + G+
Sbjct: 266 TWATQERISLQWLRRIQNYSVMDICDYDESSGRWNC 301
Score = 26.6 bits (57), Expect = 6.7
Identities = 10/51 (19%), Positives = 14/51 (27%), Gaps = 3/51 (5%)
Query: 60 LKGHSHFISDIVLSSDGNYAL---SGSWDKTLRLWDLAAGKTTRRFEDHTK 107
L + S + Y SG L K R ED++
Sbjct: 411 LNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVLEDNSA 461
>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain
{Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Length = 281
Score = 30.5 bits (67), Expect = 0.33
Identities = 18/236 (7%), Positives = 58/236 (24%), Gaps = 21/236 (8%)
Query: 94 AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKT--------IKLWNTLAHCKFTIVE 145
+TR+ + + + F D R+I + + T
Sbjct: 28 LKSGSTRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRITYFS 87
Query: 146 DGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKIN----HSGHTGYLNTVTV 201
+ + + ++ + +++ + + G +
Sbjct: 88 GKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILF 147
Query: 202 SPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCFSPNRS------FQKIKLDI 255
+ + ++ + + N + I
Sbjct: 148 ADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGHRIYFI 207
Query: 256 SRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQIVSSSRDKTIKLWNT 311
+ + ++ + + F D + D R+I+ S+ +I ++N
Sbjct: 208 TDIDGFGQIYSTDLDGKDLRK--HTSFTDYYPRHLNTDGRRIL-FSKGGSIYIFNP 260
Score = 26.7 bits (57), Expect = 4.3
Identities = 23/238 (9%), Positives = 53/238 (22%), Gaps = 29/238 (12%)
Query: 30 DTILSCSRDNTLIIWKLTRDDTNYGVPQKRLKGHSHFISDIVLSSDGNYALSGSW----- 84
D I+ D+ +W+ + +++ + I++ DG
Sbjct: 13 DRIIFVCCDD---LWEHDLKSGS----TRKIVSNLGVINNARFFPDGRKIAIRVMRGSSL 65
Query: 85 -DKTLRLWDLAAGKTTR------RFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN--- 134
L ++ G+ R + F D I+S+ +
Sbjct: 66 NTADLYFYNGENGEIKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLY 125
Query: 135 -------TLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAGWDRMVKVWNLTNCKLKI 187
V + P K+W N
Sbjct: 126 RVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFK 185
Query: 188 NHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCFSPN 245
+ ++++ + + + DGK L + +
Sbjct: 186 KIVDMSTHVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTD 243
>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus
[TaxId: 1280]}
Length = 319
Score = 29.7 bits (65), Expect = 0.62
Identities = 10/78 (12%), Positives = 21/78 (26%)
Query: 56 PQKRLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 115
P + + + G L ++ + + + R F H + ++
Sbjct: 31 PWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIH 90
Query: 116 VDNRQIVSSSRDKTIKLW 133
D R V D
Sbjct: 91 KDGRLFVCYLGDFKSTGG 108
>d1v6ba_ b.36.1.1 (A:) Harmonin {Mouse (Mus musculus) [TaxId:
10090]}
Length = 118
Score = 27.3 bits (60), Expect = 1.3
Identities = 12/57 (21%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
Query: 201 VSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDIITALCFSPNRSFQKIKLDISR 257
V G+ GG + +N GK + + AL + N+ I L ++
Sbjct: 50 VYEGGAAERHGGVVKGDEIMAIN-GKIVTDYTLAEAEAALQKAWNQGGDWIDLVVAV 105
>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing
enzyme {Neurospora crassa [TaxId: 5141]}
Length = 365
Score = 27.9 bits (61), Expect = 2.3
Identities = 29/320 (9%), Positives = 64/320 (20%), Gaps = 27/320 (8%)
Query: 67 ISDIVLSSDGNYALSGSWDKTLRL-WDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI---V 122
IS + + + K + + R I
Sbjct: 42 ISWMTFDHERKNIYGAAMKKWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLA 101
Query: 123 SSSRDKTIKLWNTLAHCKFTIVEDGHSDWV--SCVRFSPNHQNPIIVSAGWD---RMVKV 177
+ + + V V+ +N I +D +
Sbjct: 102 AKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYS 161
Query: 178 WNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHTLVHNDII 237
+LT KL + +G + V G + + + I
Sbjct: 162 ADLTANKLWTHRKLASGEVELV----GSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRI 217
Query: 238 TALCFSPNRSFQKIKLDISRTLQKSNLILYPINHGKMETPFFSLFRDVLSVAFSVDNRQI 297
P + P + A + + +
Sbjct: 218 CEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADV--------CALTFSGKYM 269
Query: 298 VSSSRDKTIKLWNTLAHCKFTIVDLETKKMVEELRPDVVSQSTKADPPMCLSLAWSTDGQ 357
+SSR L +E+ + T +S +D
Sbjct: 270 FASSRAN-----KFELQGYIAGFKLRDCGSIEKQLF-LSPTPTSGGHSNAVSPCPWSDEW 323
Query: 358 TLFAGYSDNTIRVWQVSVTS 377
+ + +++
Sbjct: 324 MAITDDQEGWLEIYRWKDEF 343
>d1ka1a_ e.7.1.1 (A:) 3';5'-adenosine bisphosphatase, PAP
phosphatase {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 354
Score = 27.0 bits (58), Expect = 3.7
Identities = 8/38 (21%), Positives = 14/38 (36%)
Query: 59 RLKGHSHFISDIVLSSDGNYALSGSWDKTLRLWDLAAG 96
L + + + +D L ++WD AAG
Sbjct: 260 HLDSQAKYCLLALGLADVYLRLPIKLSYQEKIWDHAAG 297
>d2g84a1 c.97.1.2 (A:1-189) Putative deaminase NE0047 {Nitrosomonas
europaea [TaxId: 915]}
Length = 189
Score = 25.8 bits (56), Expect = 6.9
Identities = 12/140 (8%), Positives = 41/140 (29%), Gaps = 10/140 (7%)
Query: 111 SVAFSVDNRQIVSSSRDKTIKLWNTLAHCKFTIVEDGHSDWVSCVRFSPNHQNPIIVSAG 170
+ F D+ ++++ ++ + + AH + + + + + +
Sbjct: 50 AAVFERDSGLLIAAGTNRVVPGRCSAAHAEILALSLAQAKLDTHDLSADGLPACEL---- 105
Query: 171 WDRMVKVWNLTNCKLKINHSGHTGYLNTVTVSPDGSLCASGGKDMNAMLWDLNDGKHLHT 230
V + C + +G + V + + A G + + +
Sbjct: 106 ------VTSAEPCVMCFGAVIWSGVRSLVCAARSDDVEAIGFDEGPRPENWMGGLEARGI 159
Query: 231 LVHNDIITALCFSPNRSFQK 250
V ++ + R +
Sbjct: 160 TVTTGLLRDAACALLREYNA 179
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.132 0.415
Gapped
Lambda K H
0.267 0.0415 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,417,679
Number of extensions: 63715
Number of successful extensions: 738
Number of sequences better than 10.0: 1
Number of HSP's gapped: 293
Number of HSP's successfully gapped: 165
Length of query: 380
Length of database: 2,407,596
Length adjustment: 87
Effective length of query: 293
Effective length of database: 1,213,086
Effective search space: 355434198
Effective search space used: 355434198
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)