Query psy6995
Match_columns 342
No_of_seqs 124 out of 142
Neff 3.4
Searched_HMMs 29240
Date Sat Aug 17 00:06:26 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6995.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6995hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1r6j_A Syntenin 1; PDZ, membra 99.7 2.1E-16 7.2E-21 123.9 9.5 76 247-323 3-81 (82)
2 3l4f_D SH3 and multiple ankyri 99.4 2.1E-12 7.3E-17 106.9 9.8 81 248-328 27-128 (132)
3 2he4_A Na(+)/H(+) exchange reg 99.4 3.8E-12 1.3E-16 97.0 10.1 78 248-326 4-89 (90)
4 3o46_A Maguk P55 subfamily mem 99.4 3.1E-12 1E-16 98.3 9.5 81 247-328 3-92 (93)
5 2ego_A General receptor for ph 99.4 3E-12 1E-16 99.0 9.5 76 248-323 4-95 (96)
6 2qg1_A Multiple PDZ domain pro 99.3 1.1E-11 3.6E-16 94.6 10.3 78 247-324 3-89 (92)
7 1q3o_A Shank1; PDZ, GKAP, pept 99.3 4.7E-12 1.6E-16 100.0 8.5 78 248-325 7-105 (109)
8 1y7n_A Amyloid beta A4 precurs 99.3 8.9E-12 3E-16 97.3 9.8 74 249-323 12-89 (90)
9 2dc2_A GOPC, golgi associated 99.3 5.6E-12 1.9E-16 99.3 8.6 80 248-327 9-98 (103)
10 3qe1_A Sorting nexin-27, G pro 99.3 1.3E-11 4.3E-16 96.8 10.4 81 245-326 3-104 (107)
11 1g9o_A NHE-RF; PDZ domain, com 99.3 1.5E-11 5E-16 93.7 10.4 79 247-326 2-88 (91)
12 2d92_A INAD-like protein; PDZ 99.3 1.4E-11 4.7E-16 97.6 10.2 80 247-327 14-108 (108)
13 1uez_A KIAA1526 protein; PDZ d 99.3 7.4E-12 2.5E-16 97.5 8.4 84 248-331 8-100 (101)
14 2dls_A PDZ-rhogef, RHO guanine 99.3 2.2E-11 7.5E-16 93.9 10.8 80 246-326 6-89 (93)
15 1kwa_A Hcask/LIN-2 protein; PD 99.3 1.7E-11 5.9E-16 94.3 10.1 77 249-325 2-86 (88)
16 1wi2_A Riken cDNA 2700099C19; 99.3 2.4E-11 8.1E-16 95.5 10.7 76 247-322 14-97 (104)
17 1wha_A KIAA0147 protein, scrib 99.3 1.7E-11 5.7E-16 96.3 9.6 85 246-332 5-105 (105)
18 3b76_A E3 ubiquitin-protein li 99.3 7.1E-12 2.4E-16 102.4 7.6 80 246-325 22-114 (118)
19 1uew_A Membrane associated gua 99.3 2.9E-11 9.9E-16 96.4 10.4 81 247-327 9-106 (114)
20 3r68_A Na(+)/H(+) exchange reg 99.3 1.2E-11 4E-16 94.6 7.8 80 247-327 4-91 (95)
21 3e17_A Tight junction protein 99.2 2.4E-11 8.2E-16 93.5 9.1 78 251-328 3-85 (88)
22 4e34_A Golgi-associated PDZ an 99.2 2.1E-11 7.3E-16 92.1 8.6 74 248-321 2-85 (87)
23 2v90_A PDZ domain-containing p 99.2 3E-11 1E-15 93.0 9.4 78 248-326 3-91 (96)
24 2dkr_A LIN-7 homolog B; LIN-7B 99.2 4.2E-11 1.4E-15 91.2 10.0 76 247-323 4-89 (93)
25 2f5y_A Regulator of G-protein 99.2 3.1E-11 1E-15 92.6 9.2 79 248-327 3-86 (91)
26 1uhp_A Hypothetical protein KI 99.2 3.8E-11 1.3E-15 94.5 9.7 77 246-323 6-100 (107)
27 1v62_A KIAA1719 protein; struc 99.2 4.4E-11 1.5E-15 96.4 10.3 86 241-326 8-104 (117)
28 2eeh_A PDZ domain-containing p 99.2 4.5E-11 1.5E-15 93.1 9.9 76 248-323 10-93 (100)
29 1n7e_A AMPA receptor interacti 99.2 8.6E-11 2.9E-15 90.8 11.0 80 245-325 2-91 (97)
30 2vsv_A Rhophilin-2; scaffold p 99.2 3.1E-11 1.1E-15 98.1 8.9 78 248-326 23-106 (109)
31 3cbz_A Dishevelled-2; PDZ doma 99.2 2.9E-11 1E-15 96.2 8.5 78 248-325 5-97 (108)
32 2ehr_A INAD-like protein; PDZ 99.2 5.5E-11 1.9E-15 95.0 10.1 78 248-325 15-111 (117)
33 2iwo_A Multiple PDZ domain pro 99.2 3.4E-11 1.2E-15 98.0 8.9 81 244-324 20-113 (120)
34 2e7k_A Maguk P55 subfamily mem 99.2 3.3E-11 1.1E-15 93.2 8.3 79 248-327 6-91 (91)
35 1qav_A Alpha-1 syntrophin (res 99.2 5.1E-11 1.7E-15 90.7 9.3 75 247-321 3-87 (90)
36 2pa1_A PDZ and LIM domain prot 99.2 4.8E-11 1.6E-15 90.3 9.1 73 251-323 3-84 (87)
37 2kv8_A RGS12, regulator of G-p 99.2 2.2E-11 7.6E-16 91.5 6.9 75 248-323 2-81 (83)
38 2db5_A INAD-like protein; PDZ 99.2 7.4E-11 2.5E-15 95.8 10.4 93 229-324 9-115 (128)
39 1ihj_A INAD; intermolecular di 99.2 5E-11 1.7E-15 91.8 8.9 77 246-322 3-95 (98)
40 2ejy_A 55 kDa erythrocyte memb 99.2 6.4E-11 2.2E-15 94.4 9.4 80 245-324 9-96 (97)
41 2fe5_A Presynaptic protein SAP 99.2 9.9E-11 3.4E-15 89.3 10.1 76 247-323 2-92 (94)
42 3khf_A Microtubule-associated 99.2 5.8E-11 2E-15 91.9 8.8 72 252-324 6-93 (99)
43 2jik_A Synaptojanin-2 binding 99.2 6.4E-11 2.2E-15 91.9 8.9 75 247-322 6-95 (101)
44 2z17_A Pleckstrin homology SEC 99.2 3.9E-11 1.3E-15 94.0 7.7 73 248-320 15-103 (104)
45 2eei_A PDZ domain-containing p 99.2 5.7E-11 2E-15 92.9 8.6 82 246-328 6-95 (106)
46 2cs5_A Tyrosine-protein phosph 99.2 7.8E-11 2.7E-15 94.3 9.6 79 246-324 13-106 (119)
47 2awx_A Synapse associated prot 99.2 8.8E-11 3E-15 92.1 9.6 77 248-325 3-94 (105)
48 2la8_A Inactivation-NO-after-p 99.2 1E-10 3.6E-15 93.5 10.0 79 247-325 1-86 (106)
49 2q9v_A Membrane-associated gua 99.2 4.7E-11 1.6E-15 90.7 7.5 75 248-323 2-88 (90)
50 2o2t_A Multiple PDZ domain pro 99.2 5.1E-11 1.7E-15 94.9 7.9 90 231-323 6-109 (117)
51 1uep_A Membrane associated gua 99.2 5.7E-11 2E-15 93.1 8.1 78 247-325 8-97 (103)
52 2yt7_A Amyloid beta A4 precurs 99.2 1.6E-10 5.6E-15 90.5 10.6 77 247-323 8-98 (101)
53 1wi4_A Synip, syntaxin binding 99.2 1.2E-10 4.1E-15 93.1 10.0 77 248-326 15-107 (109)
54 2byg_A Channel associated prot 99.2 6.9E-11 2.4E-15 95.6 8.6 75 248-323 24-113 (117)
55 2yuy_A RHO GTPase activating p 99.2 1.9E-11 6.6E-16 99.4 5.3 77 248-325 8-121 (126)
56 2fne_A Multiple PDZ domain pro 99.2 6.8E-11 2.3E-15 95.9 8.5 76 248-324 25-113 (117)
57 1ufx_A KIAA1526 protein; PDZ d 99.2 1.1E-10 3.8E-15 92.7 9.4 78 246-324 4-97 (103)
58 2jil_A GRIP1 protein, glutamat 99.2 8E-11 2.7E-15 90.5 8.3 75 248-323 3-91 (97)
59 2vwr_A Ligand of NUMB protein 99.2 1E-10 3.4E-15 89.9 8.9 76 248-323 3-88 (95)
60 3hpk_A Protein interacting wit 99.2 8.7E-11 3E-15 95.0 8.9 76 248-323 19-104 (125)
61 2vsp_A PDZ domain-containing p 99.2 5E-11 1.7E-15 91.2 7.0 77 248-325 3-87 (91)
62 2d90_A PDZ domain containing p 99.2 1.1E-10 3.8E-15 90.9 9.1 80 246-326 4-91 (102)
63 2i1n_A Discs, large homolog 3; 99.2 1.1E-10 3.8E-15 90.7 9.0 75 248-323 4-93 (102)
64 3nfk_A Tyrosine-protein phosph 99.2 1.1E-10 3.8E-15 91.4 9.1 75 248-322 17-106 (107)
65 2uzc_A Human pdlim5, PDZ and L 99.2 1.5E-10 5.1E-15 87.6 9.4 74 248-323 3-85 (88)
66 1d5g_A Human phosphatase HPTP1 99.2 2.5E-10 8.5E-15 87.6 10.8 75 247-322 4-91 (96)
67 2djt_A Unnamed protein product 99.2 1.8E-10 6.2E-15 89.8 10.1 77 247-324 10-98 (104)
68 3ngh_A PDZ domain-containing p 99.2 1.1E-10 3.9E-15 91.2 8.8 76 249-324 2-85 (106)
69 3kzd_A TIAM-1, T-lymphoma inva 99.2 9.9E-11 3.4E-15 94.1 8.5 78 246-323 4-93 (94)
70 1q7x_A PDZ2B domain of PTP-BAS 99.2 1.4E-10 4.9E-15 91.2 9.3 76 247-323 8-101 (108)
71 1va8_A Maguk P55 subfamily mem 99.2 2E-10 6.9E-15 91.8 10.3 75 248-322 25-106 (113)
72 1uju_A Scribble; PDZ domain, c 99.1 8.8E-11 3E-15 93.0 7.9 76 249-324 10-104 (111)
73 2d8i_A T-cell lymphoma invasio 99.1 1.3E-10 4.4E-15 94.9 9.0 86 248-335 15-111 (114)
74 2fcf_A Multiple PDZ domain pro 99.1 2.7E-10 9.3E-15 88.4 10.4 77 248-324 4-99 (103)
75 1ujd_A KIAA0559 protein; PDZ d 99.1 2.3E-10 7.9E-15 92.0 10.3 77 247-323 11-108 (117)
76 1nf3_C PAR-6B; semi-CRIB motif 99.1 2.2E-10 7.4E-15 93.6 10.2 78 247-324 28-125 (128)
77 2edv_A FERM and PDZ domain-con 99.1 8.2E-11 2.8E-15 91.6 7.2 81 249-331 9-95 (96)
78 2q3g_A PDZ and LIM domain prot 99.1 1.6E-10 5.4E-15 87.8 8.5 73 249-323 4-85 (89)
79 2i04_A Membrane-associated gua 99.1 2.4E-10 8.2E-15 85.9 9.3 71 250-321 2-84 (85)
80 1m5z_A GRIP, AMPA receptor int 99.1 2.6E-10 8.8E-15 86.7 9.6 75 247-321 5-88 (91)
81 1wf8_A Neurabin-I; PDZ domain, 99.1 1.3E-10 4.5E-15 91.4 8.2 77 246-323 7-99 (107)
82 2qkv_A Inactivation-NO-after-p 99.1 2.3E-10 8E-15 88.8 9.4 80 247-326 7-93 (96)
83 1rgw_A ZAsp protein; PDZ, cyph 99.1 3.2E-10 1.1E-14 85.0 9.8 72 250-323 3-83 (85)
84 2r4h_A Membrane-associated gua 99.1 2.3E-10 7.9E-15 91.3 9.4 76 247-323 23-108 (112)
85 1v5q_A GRIP1 homolog, glutamat 99.1 1.4E-10 4.8E-15 93.8 8.0 77 247-323 14-106 (122)
86 1wg6_A Hypothetical protein (r 99.1 8.4E-11 2.9E-15 96.4 6.7 76 249-324 26-122 (127)
87 2koj_A Partitioning defective 99.1 3.4E-10 1.2E-14 89.2 9.9 80 248-328 11-105 (111)
88 2dmz_A INAD-like protein; PDZ 99.1 1.8E-10 6.1E-15 93.4 8.4 78 247-324 14-106 (129)
89 2w4f_A Protein LAP4; structura 99.1 4.1E-10 1.4E-14 86.4 9.7 75 248-323 3-92 (97)
90 1vae_A Rhophilin 2, rhophilin, 99.1 6.6E-11 2.3E-15 95.7 5.6 87 249-336 16-109 (111)
91 2jre_A C60-1 PDZ domain peptid 99.1 2.8E-10 9.5E-15 89.3 8.9 77 247-323 11-103 (108)
92 3k1r_A Harmonin; protein-prote 99.1 2.1E-10 7.3E-15 99.3 9.1 77 247-323 83-167 (192)
93 1um1_A KIAA1849 protein, RSGI 99.1 5.1E-10 1.7E-14 88.2 10.5 75 248-323 8-95 (110)
94 2eno_A Synaptojanin-2-binding 99.1 2.9E-10 1E-14 91.3 8.9 75 248-323 17-106 (120)
95 3axa_A Afadin, nectin-3, prote 99.1 4.1E-10 1.4E-14 88.3 9.5 76 247-324 10-98 (106)
96 2iwq_A Multiple PDZ domain pro 99.1 5.2E-10 1.8E-14 91.6 10.4 81 244-324 20-119 (123)
97 2daz_A INAD-like protein; PDZ 99.1 3.9E-10 1.4E-14 91.2 9.5 88 233-323 12-110 (124)
98 1vb7_A PDZ and LIM domain 2; P 99.1 2.3E-10 7.9E-15 88.1 7.7 77 245-323 3-88 (94)
99 3i4w_A Disks large homolog 4; 99.1 3.8E-10 1.3E-14 87.5 8.9 75 247-322 10-93 (104)
100 2eeg_A PDZ and LIM domain prot 99.1 3E-10 1E-14 87.5 8.2 75 248-324 8-91 (94)
101 2dlu_A INAD-like protein; PDZ 99.1 4.5E-10 1.5E-14 88.7 9.5 78 246-324 13-98 (111)
102 2g5m_B Neurabin-2; spinophilin 99.1 2E-10 6.9E-15 90.9 7.3 76 248-324 4-95 (113)
103 2jxo_A Ezrin-radixin-moesin-bi 99.1 6.8E-10 2.3E-14 85.7 10.0 66 248-314 9-81 (98)
104 1ueq_A Membrane associated gua 99.1 6E-10 2E-14 90.3 9.7 76 247-323 18-105 (123)
105 1i16_A Interleukin 16, LCF; cy 99.1 2.3E-10 7.8E-15 93.9 7.3 75 248-323 29-117 (130)
106 3gge_A PDZ domain-containing p 99.1 3.9E-10 1.3E-14 91.5 8.6 76 248-324 5-90 (95)
107 1x5q_A LAP4 protein; PDZ domai 99.1 7.9E-10 2.7E-14 87.2 10.1 75 248-323 15-104 (110)
108 1uf1_A KIAA1526 protein; PDZ d 99.1 2E-09 6.8E-14 87.3 12.3 82 241-323 14-103 (128)
109 2opg_A Multiple PDZ domain pro 99.1 6.6E-10 2.2E-14 85.5 8.9 75 249-324 5-90 (98)
110 3egg_C Spinophilin; PP1, serin 99.1 4.5E-10 1.5E-14 97.5 8.9 77 244-321 76-168 (170)
111 3gsl_A Disks large homolog 4; 99.0 5.9E-10 2E-14 93.4 8.9 77 246-323 3-94 (196)
112 1wfg_A Regulating synaptic mem 99.0 6.1E-10 2.1E-14 91.9 8.8 71 253-323 41-126 (131)
113 2h2b_A Tight junction protein 99.0 8.6E-10 2.9E-14 86.3 9.2 78 247-325 6-98 (107)
114 1x5n_A Harmonin; PDZ domain, u 99.0 7.6E-10 2.6E-14 87.8 8.9 76 248-323 15-98 (114)
115 2pkt_A PDZ and LIM domain prot 99.0 6.4E-10 2.2E-14 84.7 8.2 72 250-323 5-85 (91)
116 3sfj_A TAX1-binding protein 3; 99.0 4.7E-10 1.6E-14 87.2 7.6 62 260-321 19-102 (104)
117 1tp5_A Presynaptic density pro 99.0 9.4E-10 3.2E-14 87.8 9.4 75 247-322 13-96 (119)
118 2edz_A PDZ domain-containing p 99.0 1.1E-09 3.6E-14 87.3 9.5 79 245-323 10-96 (114)
119 2gzv_A PRKCA-binding protein; 99.0 1.4E-09 4.6E-14 87.9 10.0 76 248-323 24-109 (114)
120 2iwn_A Multiple PDZ domain pro 99.0 9E-10 3.1E-14 83.7 8.4 75 248-323 4-92 (97)
121 1mfg_A ERB-B2 interacting prot 99.0 7.5E-10 2.6E-14 85.0 7.8 72 248-322 3-91 (95)
122 2kpk_A Membrane-associated gua 99.0 1.3E-09 4.3E-14 89.2 9.6 74 248-322 18-103 (129)
123 1whd_A RGS3, regulator of G-pr 99.0 5.6E-10 1.9E-14 87.3 7.1 74 249-323 16-94 (100)
124 2csj_A TJP2 protein; PDZ domai 99.0 7.1E-10 2.4E-14 88.7 7.9 75 248-323 14-103 (117)
125 1wfv_A Membrane associated gua 99.0 2.7E-10 9.4E-15 88.2 5.3 76 248-324 11-96 (103)
126 1z87_A Alpha-1-syntrophin; pro 99.0 1E-09 3.4E-14 102.1 9.3 80 247-326 76-165 (263)
127 1x6d_A Interleukin-16; PDZ dom 99.0 1.3E-09 4.5E-14 87.2 8.7 75 249-323 16-102 (119)
128 1n7t_A 99-MER peptide of densi 99.0 1.1E-09 3.8E-14 85.4 7.8 75 246-323 9-100 (103)
129 4amh_A Disks large homolog 1; 99.0 1.8E-09 6.2E-14 85.5 9.0 72 254-325 7-93 (106)
130 1wf7_A Enigma homologue protei 99.0 1.2E-09 4.2E-14 85.3 7.7 74 248-323 5-87 (103)
131 1qau_A Neuronal nitric oxide s 99.0 2.8E-09 9.6E-14 84.0 9.3 75 249-323 2-86 (112)
132 1v6b_A Harmonin isoform A1; st 99.0 2.6E-09 8.8E-14 86.3 9.2 73 249-323 19-106 (118)
133 3r0h_A INAD, inactivation-NO-a 99.0 2.4E-09 8.2E-14 91.5 9.4 80 249-328 114-200 (206)
134 3bpu_A Membrane-associated gua 98.9 2.3E-09 7.7E-14 81.3 8.0 72 248-322 3-84 (88)
135 2dm8_A INAD-like protein; PDZ 98.9 1.6E-09 5.4E-14 86.0 7.4 75 248-323 17-102 (116)
136 1v5l_A PDZ and LIM domain 3; a 98.9 6.3E-10 2.2E-14 87.2 4.9 74 250-325 7-89 (103)
137 2lob_A Golgi-associated PDZ an 98.5 9.3E-11 3.2E-15 94.8 0.0 73 249-321 28-110 (112)
138 1um7_A Synapse-associated prot 98.9 2E-09 6.8E-14 84.6 7.4 75 247-322 14-97 (113)
139 2edp_A Fragment, shroom family 98.9 2E-09 7E-14 84.1 7.0 75 248-323 9-93 (100)
140 3qik_A Phosphatidylinositol 3, 98.9 3.8E-09 1.3E-13 86.7 8.3 73 248-321 17-98 (101)
141 3r0h_A INAD, inactivation-NO-a 98.9 6.8E-09 2.3E-13 88.7 10.1 76 248-324 18-108 (206)
142 3suz_A Amyloid beta A4 precurs 98.9 2.2E-08 7.4E-13 96.3 14.6 81 243-323 199-293 (388)
143 3cyy_A Tight junction protein 98.9 8E-09 2.8E-13 78.2 9.3 74 249-323 3-82 (92)
144 1ujv_A Membrane associated gua 98.9 8.1E-09 2.8E-13 80.7 9.3 74 247-323 9-90 (96)
145 2kjd_A Sodium/hydrogen exchang 98.9 8E-09 2.7E-13 83.2 9.5 73 248-321 9-90 (128)
146 2kom_A Partitioning defective 98.9 8.2E-09 2.8E-13 83.7 9.5 74 249-323 31-119 (121)
147 3soe_A Membrane-associated gua 98.9 5.7E-09 2E-13 86.4 8.3 76 247-325 11-94 (113)
148 1uit_A Human discs large 5 pro 98.9 1.1E-08 3.8E-13 81.6 9.6 75 248-323 19-100 (117)
149 3gsl_A Disks large homolog 4; 98.8 8.1E-09 2.8E-13 86.5 8.8 75 249-324 101-190 (196)
150 2vz5_A TAX1-binding protein 3; 98.8 6.5E-09 2.2E-13 86.8 7.9 77 249-325 24-125 (139)
151 1p1d_A PDZ45, glutamate recept 98.8 7E-09 2.4E-13 89.1 8.3 77 247-323 5-97 (196)
152 2eaq_A LIM domain only protein 98.8 1.3E-08 4.3E-13 77.2 8.7 71 252-322 7-87 (90)
153 2qt5_A Glutamate receptor-inte 98.8 1.3E-08 4.4E-13 87.3 9.7 74 249-322 8-91 (200)
154 2rcz_A Tight junction protein 98.8 1.7E-08 6E-13 74.1 8.7 68 254-322 7-79 (81)
155 1b8q_A Protein (neuronal nitri 98.8 7.2E-09 2.5E-13 83.7 7.1 76 248-323 8-93 (127)
156 1w9e_A Syntenin 1; cell adhesi 98.8 1.4E-08 4.9E-13 85.2 9.2 74 248-321 4-84 (166)
157 2qbw_A PDZ-fibronectin fusion 98.8 9.6E-09 3.3E-13 87.3 7.3 68 260-328 2-86 (195)
158 1wif_A RSGI RUH-020, riken cDN 98.8 8.3E-09 2.8E-13 86.2 6.7 75 248-323 27-110 (126)
159 3tsv_A Tight junction protein 98.8 2.6E-08 8.9E-13 81.6 8.7 63 260-322 39-110 (124)
160 1srq_A RAP1GAP, GTPase-activat 98.7 7.7E-09 2.6E-13 99.8 4.5 40 14-59 21-60 (341)
161 1p1d_A PDZ45, glutamate recept 98.7 1.2E-07 4E-12 81.5 10.6 75 249-323 108-194 (196)
162 3suz_A Amyloid beta A4 precurs 98.7 2.4E-09 8.2E-14 102.9 -0.3 73 251-324 298-374 (388)
163 2krg_A Na(+)/H(+) exchange reg 98.7 4.4E-08 1.5E-12 88.2 7.9 72 248-320 9-89 (216)
164 1w9e_A Syntenin 1; cell adhesi 98.7 1.1E-07 3.7E-12 79.9 9.7 74 248-322 88-164 (166)
165 1wh1_A KIAA1095 protein; PDZ d 98.7 3.9E-08 1.3E-12 79.6 6.7 75 248-324 19-107 (124)
166 3tsz_A Tight junction protein 98.6 8.2E-08 2.8E-12 92.9 8.9 73 248-322 9-90 (391)
167 2xkx_A Disks large homolog 4; 98.6 7.5E-08 2.6E-12 99.0 8.6 76 247-323 58-148 (721)
168 2yub_A LIMK-2, LIM domain kina 98.5 2.3E-07 7.8E-12 75.8 8.4 67 257-323 24-104 (118)
169 2qt5_A Glutamate receptor-inte 98.5 3.8E-07 1.3E-11 78.1 8.9 73 249-322 107-193 (200)
170 3shw_A Tight junction protein 98.5 3E-07 1E-11 91.8 8.3 72 249-322 2-82 (468)
171 2xkx_A Disks large homolog 4; 98.4 3E-07 1E-11 94.6 8.2 75 249-324 155-244 (721)
172 2pzd_A Serine protease HTRA2; 98.0 1.2E-05 4E-10 63.5 6.4 52 269-322 35-89 (113)
173 1fc6_A Photosystem II D1 prote 97.9 1.6E-05 5.5E-10 75.7 7.8 64 260-323 85-158 (388)
174 2p3w_A Probable serine proteas 97.9 2.7E-05 9.1E-10 61.5 6.8 52 269-322 35-89 (112)
175 3id1_A Regulator of sigma E pr 97.8 4.6E-05 1.6E-09 59.4 7.2 52 271-324 5-61 (95)
176 2zpm_A Regulator of sigma E pr 97.8 1.8E-05 6.3E-10 59.8 4.8 48 271-320 7-58 (91)
177 3pv2_A DEGQ; trypsin fold, PDZ 97.8 6.4E-05 2.2E-09 73.6 9.0 50 271-322 389-441 (451)
178 3i18_A LMO2051 protein; alpha- 97.6 7.1E-05 2.4E-09 58.5 5.7 53 266-321 4-62 (100)
179 4fgm_A Aminopeptidase N family 97.6 5.1E-05 1.7E-09 77.3 5.9 59 260-321 485-551 (597)
180 3rle_A Golgi reassembly-stacki 97.6 0.00014 4.7E-09 63.7 7.6 77 259-338 94-198 (209)
181 1te0_A Protease DEGS; two doma 97.6 0.00019 6.6E-09 66.3 8.6 90 230-322 202-301 (318)
182 4a8c_A Periplasmic PH-dependen 97.5 0.0004 1.4E-08 67.5 10.3 50 271-322 366-418 (436)
183 2i6v_A General secretion pathw 97.5 6.9E-05 2.4E-09 57.0 3.8 50 271-322 22-76 (87)
184 2l97_A HTRA, putative serine p 97.5 0.00013 4.5E-09 60.1 5.3 51 269-322 57-113 (134)
185 2i4s_A General secretion pathw 97.4 0.00022 7.6E-09 56.1 6.1 49 272-322 41-94 (105)
186 2kjp_A Uncharacterized protein 97.4 8E-05 2.7E-09 58.0 3.3 48 271-321 4-56 (91)
187 3stj_A Protease DEGQ; serine p 97.4 0.00016 5.6E-09 68.4 5.6 89 231-322 222-320 (345)
188 3rle_A Golgi reassembly-stacki 97.4 0.00024 8.1E-09 62.2 6.1 51 271-322 19-74 (209)
189 1y8t_A Hypothetical protein RV 97.3 0.00028 9.5E-09 65.1 6.6 81 230-323 210-300 (324)
190 1lcy_A HTRA2 serine protease; 97.3 0.00026 9E-09 65.8 6.4 52 269-322 256-310 (325)
191 1ky9_A Protease DO, DEGP, HTRA 97.3 6.9E-05 2.4E-09 73.4 2.5 59 262-322 372-438 (448)
192 3k50_A Putative S41 protease; 97.3 0.00012 4.1E-09 71.4 3.9 52 271-325 93-147 (403)
193 3pv2_A DEGQ; trypsin fold, PDZ 97.3 0.00022 7.4E-09 69.9 5.6 91 230-322 239-339 (451)
194 2kl1_A YLBL protein; structure 97.3 0.00012 4.2E-09 56.8 2.9 48 271-321 8-60 (94)
195 3num_A Serine protease HTRA1; 97.2 5.3E-05 1.8E-09 70.5 0.0 52 269-322 254-308 (332)
196 4a8c_A Periplasmic PH-dependen 97.1 0.00051 1.8E-08 66.7 5.9 51 269-321 263-319 (436)
197 3qo6_A Protease DO-like 1, chl 97.1 0.0012 4E-08 62.0 7.6 86 230-322 214-319 (348)
198 1k32_A Tricorn protease; prote 97.0 0.0011 3.9E-08 68.4 7.2 63 259-324 736-815 (1045)
199 2hga_A Conserved protein MTH13 96.7 0.0021 7.3E-08 52.9 5.6 47 271-320 28-79 (125)
200 1ky9_A Protease DO, DEGP, HTRA 96.3 0.0017 6E-08 63.5 3.2 52 269-322 286-343 (448)
201 4f7g_A Talin-1; alpha-helix bu 95.8 0.042 1.4E-06 48.3 9.3 86 150-238 125-210 (222)
202 1mix_A Talin; focal adhesion, 95.6 0.067 2.3E-06 45.7 9.4 86 150-238 114-199 (206)
203 3ivf_A Talin-1; FERM domain, c 94.1 0.21 7.2E-06 46.9 9.3 84 150-238 279-364 (371)
204 4fln_A Protease DO-like 2, chl 93.3 0.073 2.5E-06 54.1 4.9 52 269-321 277-342 (539)
205 4dxa_B KREV interaction trappe 90.8 1.6 5.6E-05 40.3 10.5 86 149-240 220-311 (322)
206 4fln_A Protease DO-like 2, chl 83.1 0.43 1.5E-05 48.6 1.9 42 271-314 418-461 (539)
207 3au4_A Myosin-X; protein-prote 82.6 4 0.00014 40.4 8.6 81 150-238 450-531 (555)
208 3pvl_A Myosin VIIA isoform 1; 80.5 6.9 0.00023 40.5 9.7 66 168-239 493-564 (655)
209 3so6_A LDL receptor adaptor pr 73.2 5.3 0.00018 32.1 5.2 45 167-211 43-87 (137)
210 1ef1_A Moesin; membrane, FERM 65.7 26 0.00088 31.3 8.6 57 168-224 211-270 (294)
211 2ej8_A DCC-interacting protein 61.6 14 0.00048 31.2 5.7 44 168-211 57-100 (160)
212 2ela_A Adapter protein contain 58.4 18 0.00061 31.3 5.9 44 168-211 70-113 (175)
213 3f0w_A NUMB-R, NUMB-like prote 55.6 17 0.00058 30.9 5.3 69 167-238 77-153 (168)
214 2v76_A Docking protein 1; alte 54.6 50 0.0017 27.0 7.7 79 154-239 5-98 (107)
215 2i1j_A Moesin; FERM, coiled-co 51.2 48 0.0017 33.6 8.6 57 168-224 214-273 (575)
216 1ntv_A Disabled homolog 1; bet 46.7 26 0.00088 29.4 4.9 35 168-202 61-95 (152)
217 3b77_A Uncharacterized protein 42.6 79 0.0027 28.7 7.7 73 171-247 40-125 (193)
218 1aqc_A X11; PTB domain; 2.30A 42.6 29 0.00098 29.8 4.7 35 168-202 64-98 (172)
219 4dbb_A Amyloid beta A4 precurs 40.6 33 0.0011 29.1 4.7 35 168-202 53-87 (162)
220 1h4r_A Merlin; FERM, neurofibr 38.6 1.1E+02 0.0036 27.7 8.1 47 168-214 231-278 (314)
221 1p5t_A DOK1, docking protein 1 38.2 1.2E+02 0.0042 25.5 7.8 80 153-239 6-100 (127)
222 1ip9_A BEM1 protein; ubiquitin 38.1 30 0.001 27.8 3.7 34 206-242 13-47 (85)
223 1pfj_A TFIIH basal transcripti 36.0 80 0.0027 26.1 6.2 71 171-241 23-100 (108)
224 1p3r_A Disabled homolog 2; PTB 34.4 51 0.0018 27.8 4.9 32 168-199 60-91 (160)
225 2dlw_A Docking protein 2, isof 32.8 12 0.00042 31.0 0.8 79 154-239 10-100 (113)
226 3hsa_A Pleckstrin homology dom 31.6 1.2E+02 0.004 25.7 6.6 62 172-238 45-118 (126)
227 3qij_A Protein 4.1; cytoskelet 30.3 57 0.0019 29.7 4.8 43 168-212 217-259 (296)
228 1n3h_A SHC transforming protei 28.2 29 0.00099 30.9 2.4 32 168-199 120-151 (207)
229 3d8d_A Amyloid beta A4 precurs 26.9 66 0.0023 27.9 4.4 38 169-206 56-93 (148)
230 3dxe_A Amyloid beta A4 protein 25.9 87 0.003 26.5 4.9 66 168-238 46-118 (140)
231 1s3a_A NADH-ubiquinone oxidore 23.8 91 0.0031 24.5 4.4 35 204-241 64-98 (102)
232 1q5y_A NIKR, nickel responsive 23.7 83 0.0028 24.1 4.0 44 207-254 37-80 (85)
233 2vv6_A FIXL, sensor protein FI 20.2 31 0.0011 24.7 0.9 30 175-204 2-31 (119)
No 1
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=99.67 E-value=2.1e-16 Score=123.89 Aligned_cols=76 Identities=29% Similarity=0.493 Sum_probs=70.8
Q ss_pred CCceEEEeecCCCCCCCeEEcCCceEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhccC-cEEEEEeCC
Q psy6995 247 SPAQELTLKRNGLGQLGFHVQPDGLVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTSS-LVTVTVIPA 323 (342)
Q Consensus 247 cet~El~LrR~~~gqLGFhV~~EG~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts~-~V~v~VipP 323 (342)
.+.+.++|+|+..++|||++. +|.|+.|.++|+|++|||++||+| |||++|..++|+|++++||.+. .|+|+|+|.
T Consensus 3 ~~~r~v~l~k~~~g~~Gf~i~-~g~I~~v~~gspA~~aGl~~GD~Il~VNG~~v~~~~~~evv~llr~~g~~V~L~v~p~ 81 (82)
T 1r6j_A 3 MDPRTITMHKDSTGHVGFIFK-NGKITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMPA 81 (82)
T ss_dssp TCCEEEEEECCTTSCCCEEEE-TTEEEEECTTSHHHHHTCCSSEEEEEETTEECTTCCHHHHHHHHHHSCSEEEEEEEEC
T ss_pred CceEEEEEEECCCCCeEEEEE-CCEEEEecCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCEEEEEEEeC
Confidence 457899999998899999997 789999999999999999999999 9999999999999999999665 799999986
No 2
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=99.37 E-value=2.1e-12 Score=106.90 Aligned_cols=81 Identities=20% Similarity=0.362 Sum_probs=69.4
Q ss_pred CceEEEeecCCCCCCCeEEcCC-----------------c-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHH
Q psy6995 248 PAQELTLKRNGLGQLGFHVQPD-----------------G-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMV 307 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~E-----------------G-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~v 307 (342)
+.+.++|.|.+.++|||.+... | +|..|.++|+|++||||+||+| |||++|..++|++++
T Consensus 27 ~~r~v~l~r~~~~g~Gf~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~~~ 106 (132)
T 3l4f_D 27 KEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVV 106 (132)
T ss_dssp CCCEEEEECCTTSCCCEEEEEECCSSCCSCCCCCTTSCCSEEEEEECTTSGGGGGTCCTTCEEEEESSSBCTTSCHHHHH
T ss_pred CCEEEEEEECCCCcEeEEEeccCCCCccccccccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHH
Confidence 5678889998888999999543 1 8999999999999999999999 999999999999999
Q ss_pred HHHhccC-cEEEEEeCCCCCCC
Q psy6995 308 DLLKTSS-LVTVTVIPALSDGT 328 (342)
Q Consensus 308 dlLrts~-~V~v~VipP~~dg~ 328 (342)
.+|+... .|.|+|++..+...
T Consensus 107 ~~l~~~g~~v~l~v~~~~~~~~ 128 (132)
T 3l4f_D 107 NMIRQGGNTLMVKVVMVTRHPD 128 (132)
T ss_dssp HHHHHTTTEEEEEEECCCC---
T ss_pred HHHHcCCCEEEEEEEECCCCCC
Confidence 9999544 78999988765443
No 3
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=99.36 E-value=3.8e-12 Score=96.99 Aligned_cols=78 Identities=22% Similarity=0.333 Sum_probs=68.8
Q ss_pred CceEEEeecCCCCCCCeEEcCC----c-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhcc-CcEEEE
Q psy6995 248 PAQELTLKRNGLGQLGFHVQPD----G-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTS-SLVTVT 319 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~E----G-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts-~~V~v~ 319 (342)
.++.++|.|.. .+|||.+... | +|++|.++++|++|||++||+| |||++|.+.+|+++.++|+.. ..|+|+
T Consensus 4 ~~r~v~l~k~~-~g~G~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~ 82 (90)
T 2he4_A 4 RPRLCHLRKGP-QGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLL 82 (90)
T ss_dssp CCEEEEEECBT-TBCCEEEEECSSSSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTSCHHHHHHHHTTSSSEEEEE
T ss_pred CcEEEEEEECC-CCccEEEEccCCCCCEEEEEECCCChHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEE
Confidence 36788898876 5899999644 4 7999999999999999999999 999999999999999999975 479999
Q ss_pred EeCCCCC
Q psy6995 320 VIPALSD 326 (342)
Q Consensus 320 VipP~~d 326 (342)
|..+..+
T Consensus 83 v~r~~~~ 89 (90)
T 2he4_A 83 VVGPSTR 89 (90)
T ss_dssp EECCCCC
T ss_pred EEccCCC
Confidence 9988764
No 4
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=99.36 E-value=3.1e-12 Score=98.28 Aligned_cols=81 Identities=22% Similarity=0.415 Sum_probs=67.0
Q ss_pred CCceEEEeecCCCCCCCeEEcCC----c-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhccC-cEE
Q psy6995 247 SPAQELTLKRNGLGQLGFHVQPD----G-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTSS-LVT 317 (342)
Q Consensus 247 cet~El~LrR~~~gqLGFhV~~E----G-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts~-~V~ 317 (342)
.+.+++.|.|++ ..|||.+..+ + +|..|.++|+|++|| |++||+| |||++|...+|++++++|+.+. .|+
T Consensus 3 ~~~r~v~l~k~~-~~lG~~i~~~~~~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~ 81 (93)
T 3o46_A 3 DSVKIIRLVKNR-EPLGATIKKDEQTGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQSQGAIT 81 (93)
T ss_dssp -CCEEEEEEESS-SCCCEEEEECTTTCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHHHCCEEEE
T ss_pred ccEEEEEEEeCC-CCccEEEEecCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEE
Confidence 356888899986 5999999754 3 899999999999999 9999999 9999999999999999998655 789
Q ss_pred EEEeCCCCCCC
Q psy6995 318 VTVIPALSDGT 328 (342)
Q Consensus 318 v~VipP~~dg~ 328 (342)
|+|+|...+..
T Consensus 82 l~v~~~~~~~~ 92 (93)
T 3o46_A 82 FKIIPGSKEET 92 (93)
T ss_dssp EEEECC-----
T ss_pred EEEEeCCCCCC
Confidence 99998765443
No 5
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=99.36 E-value=3e-12 Score=99.04 Aligned_cols=76 Identities=24% Similarity=0.398 Sum_probs=67.3
Q ss_pred CceEEEeecCCCCCCCeEEcCC------------c-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhc
Q psy6995 248 PAQELTLKRNGLGQLGFHVQPD------------G-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKT 312 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~E------------G-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrt 312 (342)
..++++|.|...+.|||.+... | +|..|.++++|++|||++||+| |||++|.+++|+++.++|+.
T Consensus 4 ~~r~v~l~k~~~~~~Gf~l~~~g~~~~~~~~~~~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~ 83 (96)
T 2ego_A 4 QRKVLTLEKGDNQTFGFEIQTYGLHHREEQRVEMVTFVARVHESSPAQLAGLTPGDTIASVNGLNVEGIRHREIVDIIKA 83 (96)
T ss_dssp CEEEEEEECCTTCCCSEEEEEEEC-------CCEEEEEEEECTTCHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHH
T ss_pred ccEEEEEEeCCCCCccEEEEeccccccCCCCCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 4678899998878999999851 1 8999999999999999999999 99999999999999999985
Q ss_pred cC-cEEEEEeCC
Q psy6995 313 SS-LVTVTVIPA 323 (342)
Q Consensus 313 s~-~V~v~VipP 323 (342)
.. .|+|+|++.
T Consensus 84 ~~~~v~l~v~~~ 95 (96)
T 2ego_A 84 SGNVLRLETLYG 95 (96)
T ss_dssp TTTEEEEEEECC
T ss_pred CCCeEEEEEEEC
Confidence 44 788888864
No 6
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=99.32 E-value=1.1e-11 Score=94.62 Aligned_cols=78 Identities=26% Similarity=0.357 Sum_probs=68.2
Q ss_pred CCceEEEeecCCCCCCCeEEcCC----c-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhcc-CcEE
Q psy6995 247 SPAQELTLKRNGLGQLGFHVQPD----G-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTS-SLVT 317 (342)
Q Consensus 247 cet~El~LrR~~~gqLGFhV~~E----G-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts-~~V~ 317 (342)
|++.+++|.|.....|||.+... | +|.+|.++|+|++|| |++||+| |||+++..++|+++..+++.. ..|.
T Consensus 3 ~~~~~v~l~k~~~~~lG~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~ 82 (92)
T 2qg1_A 3 SDTLTIGLQKKPGKGLGLSIVGKRNDTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKCSLGTVT 82 (92)
T ss_dssp -CEEEEEEECCTTSCCSEEEECCSSSCSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEE
T ss_pred ceEEEEEEEeCCCCcccEEEEeccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 57889999998778999999542 4 799999999999999 9999999 999999999999999999854 4789
Q ss_pred EEEeCCC
Q psy6995 318 VTVIPAL 324 (342)
Q Consensus 318 v~VipP~ 324 (342)
|+|..+.
T Consensus 83 l~v~R~~ 89 (92)
T 2qg1_A 83 LEVGRIS 89 (92)
T ss_dssp EEEECCC
T ss_pred EEEEccc
Confidence 9988764
No 7
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=99.31 E-value=4.7e-12 Score=100.05 Aligned_cols=78 Identities=21% Similarity=0.381 Sum_probs=67.3
Q ss_pred CceEEEeecCCCCCCCeEEcCC-----------------c-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHH
Q psy6995 248 PAQELTLKRNGLGQLGFHVQPD-----------------G-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMV 307 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~E-----------------G-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~v 307 (342)
+.+.++|.|...++|||.+... | +|+.|.++++|++|||++||+| |||++|.+++|++++
T Consensus 7 ~~~~v~l~~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~ 86 (109)
T 1q3o_A 7 KEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVV 86 (109)
T ss_dssp EEEEEEEECCTTSCCSEEEEESSCCCTTSCCCCCSSCCSSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHH
T ss_pred CcEEEEEEECCCCCCcEEEEeccCCCCcccccccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHH
Confidence 4577889888889999999643 2 7999999999999999999999 999999999999999
Q ss_pred HHHhccC-cEEEEEeCCCC
Q psy6995 308 DLLKTSS-LVTVTVIPALS 325 (342)
Q Consensus 308 dlLrts~-~V~v~VipP~~ 325 (342)
.+|+... .|.|+|+++.+
T Consensus 87 ~~l~~~~~~v~l~v~~~~~ 105 (109)
T 1q3o_A 87 NMIRQGGNTLMVKVVMVTR 105 (109)
T ss_dssp HHHHHTTTEEEEEEEEEEC
T ss_pred HHHHhCCCEEEEEEEECCC
Confidence 9998544 68888877643
No 8
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.31 E-value=8.9e-12 Score=97.28 Aligned_cols=74 Identities=27% Similarity=0.496 Sum_probs=63.8
Q ss_pred ceEEEeecC-CCCCCCeEEcCCceEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhccC-cEEEEEeCC
Q psy6995 249 AQELTLKRN-GLGQLGFHVQPDGLVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTSS-LVTVTVIPA 323 (342)
Q Consensus 249 t~El~LrR~-~~gqLGFhV~~EG~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts~-~V~v~VipP 323 (342)
...++++|+ ...+|||.+. .|+|++|.++|+|++||||+||+| |||++|...+|++++++|+... .|.|+++|-
T Consensus 12 ~~~~~i~~~~~~~~lG~~~~-~G~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g~~v~l~v~p~ 89 (90)
T 1y7n_A 12 VTTVLIRRPDLRYQLGFSVQ-NGIICSLMRGGIAERGGVRVGHRIIEINGQSVVATPHEKIVHILSNAVGEIHMKTMPA 89 (90)
T ss_dssp CEEEEEEESSTTSCCCEEEE-TTEEEEECTTSHHHHHTCCSSCEEEEETTEECTTSCHHHHHHHHHHCCEEEEEEEECC
T ss_pred cceEEEEeCCCccccCeEec-CCEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEEC
Confidence 355566665 4489999996 579999999999999999999999 9999999999999999998544 788888864
No 9
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=99.31 E-value=5.6e-12 Score=99.35 Aligned_cols=80 Identities=19% Similarity=0.286 Sum_probs=69.0
Q ss_pred CceEEEeecCCCCCCCeEEcCC-----c-eEEEEcccchhhhh-CCCCCCEE--eecccccCCCHHHHHHHHhcc-CcEE
Q psy6995 248 PAQELTLKRNGLGQLGFHVQPD-----G-LVTEVEHMGLAYQE-GLKQGCRL--ICKVAVSTLSHDQMVDLLKTS-SLVT 317 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~E-----G-~Vt~VE~~g~Ae~A-GLR~G~RL--Icg~sV~~lsHeq~vdlLrts-~~V~ 317 (342)
+.++++|.|...++|||.+... | +|..|.++|+|+++ ||++||+| |||++|..++|++++++|+.. ..|+
T Consensus 9 ~~~~v~l~~~~~~~lG~~l~~g~~~~~~~~V~~V~~~s~A~~a~gL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~v~ 88 (103)
T 2dc2_A 9 PIRKVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGEIE 88 (103)
T ss_dssp CEEEEEEECCSSSCCCEEEEEEGGGTEEEEEEEECTTSHHHHHTCCCSSEEEEEETTEESTTSCHHHHHHHHHHCCSEEE
T ss_pred CcEEEEEEeCCCCccCEEEEeccCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEE
Confidence 4678889998889999999642 4 89999999999995 99999999 999999999999999999865 4899
Q ss_pred EEEeCCCCCC
Q psy6995 318 VTVIPALSDG 327 (342)
Q Consensus 318 v~VipP~~dg 327 (342)
|++.++.++.
T Consensus 89 l~v~~~~~~~ 98 (103)
T 2dc2_A 89 FEVVYVALEH 98 (103)
T ss_dssp EEEEECC---
T ss_pred EEEEecCCcc
Confidence 9999987765
No 10
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=99.31 E-value=1.3e-11 Score=96.82 Aligned_cols=81 Identities=27% Similarity=0.455 Sum_probs=68.2
Q ss_pred CCCCceEEEeecCCCCCCCeEEcCC----c--------------eEEEEcccchhhhhCCCCCCEE--eecccccCCCHH
Q psy6995 245 PGSPAQELTLKRNGLGQLGFHVQPD----G--------------LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHD 304 (342)
Q Consensus 245 ~Gcet~El~LrR~~~gqLGFhV~~E----G--------------~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHe 304 (342)
++-+++.+.|.|... +|||.+... | +|..|.++++|++|||++||+| |||++|..++|+
T Consensus 3 ~~~~~r~v~l~k~~~-g~G~~l~~~~~~~~~~~~~~~~~~~p~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~ 81 (107)
T 3qe1_A 3 HGGSPRVVRIVKSES-GYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGVRKGDRILEVNGVNVEGATHK 81 (107)
T ss_dssp ---CCEEEEEECBTT-BTCEEEECCSSSCCCCEESSSSEESCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHH
T ss_pred CCCCcEEEEEEECCC-CCCEEEEcccccCCcceeccccccCCceEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHH
Confidence 455788999999865 799999654 1 5999999999999999999999 999999999999
Q ss_pred HHHHHHhcc-CcEEEEEeCCCCC
Q psy6995 305 QMVDLLKTS-SLVTVTVIPALSD 326 (342)
Q Consensus 305 q~vdlLrts-~~V~v~VipP~~d 326 (342)
+++++|+.. ..|.|++.++...
T Consensus 82 ~~~~~l~~~g~~v~l~v~r~~~~ 104 (107)
T 3qe1_A 82 QVVDLIRAGEKELILTVLSVESE 104 (107)
T ss_dssp HHHHHHHHCSSEEEEEEECSSCC
T ss_pred HHHHHHHcCCCEEEEEEEcCCCC
Confidence 999999864 4799999887543
No 11
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=99.30 E-value=1.5e-11 Score=93.65 Aligned_cols=79 Identities=25% Similarity=0.361 Sum_probs=68.1
Q ss_pred CCceEEEeecCCCCCCCeEEcCC----c-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhcc-CcEEE
Q psy6995 247 SPAQELTLKRNGLGQLGFHVQPD----G-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTS-SLVTV 318 (342)
Q Consensus 247 cet~El~LrR~~~gqLGFhV~~E----G-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts-~~V~v 318 (342)
++++.++|.|.. .+|||.+... | +|+.|.++++|++|||++||+| |||++|.+++|++++.+|+.. ..+.+
T Consensus 2 ~~~r~v~l~r~~-~g~G~~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~ 80 (91)
T 1g9o_A 2 MLPRLCCLEKGP-NGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRL 80 (91)
T ss_dssp CCCEEEEEECBT-TBCCEEEEECTTCSSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEE
T ss_pred CccEEEEEEeCC-CcccEEEEecCCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEE
Confidence 467889999987 4799999543 3 7999999999999999999999 999999999999999999965 47788
Q ss_pred EEeCCCCC
Q psy6995 319 TVIPALSD 326 (342)
Q Consensus 319 ~VipP~~d 326 (342)
+++..+.+
T Consensus 81 ~~~~r~~~ 88 (91)
T 1g9o_A 81 LVVDPETD 88 (91)
T ss_dssp EEECCCCS
T ss_pred EEEcCCcc
Confidence 88876543
No 12
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.29 E-value=1.4e-11 Score=97.65 Aligned_cols=80 Identities=24% Similarity=0.370 Sum_probs=69.8
Q ss_pred CCceEEEeecCCCCCCCeEEcC---------Cc-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhcc
Q psy6995 247 SPAQELTLKRNGLGQLGFHVQP---------DG-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTS 313 (342)
Q Consensus 247 cet~El~LrR~~~gqLGFhV~~---------EG-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts 313 (342)
.+.+++.|.|.. .+|||.+.. .| +|..|.++|+|++|| |++||+| |||++|..++|++++++|+..
T Consensus 14 ~~~~~v~l~k~~-~glG~~i~~~~~~~~~~~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 92 (108)
T 2d92_A 14 PEVKIVELVKDC-KGLGFSILDYQDPLDPTRSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILKAV 92 (108)
T ss_dssp SSCEEEEEEECS-SCCSEEEEEEECSSCTTCEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHHHHS
T ss_pred CceEEEEEEECC-CccCEEEecccccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 467889998886 689999954 23 799999999999999 9999999 999999999999999999974
Q ss_pred --CcEEEEEeCCCCCC
Q psy6995 314 --SLVTVTVIPALSDG 327 (342)
Q Consensus 314 --~~V~v~VipP~~dg 327 (342)
..|+|+|..|...|
T Consensus 93 ~~~~v~l~v~R~~~~~ 108 (108)
T 2d92_A 93 PPGLVHLGICSGPSSG 108 (108)
T ss_dssp CSEEEEEEEECCCCCC
T ss_pred CCCeEEEEEEcCCCCC
Confidence 37999999887654
No 13
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.29 E-value=7.4e-12 Score=97.45 Aligned_cols=84 Identities=27% Similarity=0.397 Sum_probs=70.9
Q ss_pred CceEEEeecCC-CCCCCeEEcCC-----c-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhccCcEEE
Q psy6995 248 PAQELTLKRNG-LGQLGFHVQPD-----G-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTSSLVTV 318 (342)
Q Consensus 248 et~El~LrR~~-~gqLGFhV~~E-----G-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts~~V~v 318 (342)
+.+++.|.|++ ...|||.+... | +|+.|.++++|++|||++||+| |||++|.+++|.+++.+++....|.|
T Consensus 8 ~~~~v~l~~~~~~~~lG~~~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~v~l 87 (101)
T 1uez_A 8 EVRLVSLRRAKAHEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKEGLRVGDQILRVNDKSLARVTHAEAVKALKGSKKLVL 87 (101)
T ss_dssp CCEEECCCCCCTTTCSSEEEEECTTTTCCEEEEEECTTSHHHHHTCCSSCCEEEETTEECSSCCHHHHHHHSSSSSSCCE
T ss_pred ccEEEEEEECCCCCcccEEEeCCCCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHhhcCCCeEEE
Confidence 67889999975 47999999643 4 7999999999999999999999 99999999999999999987778889
Q ss_pred EEeCCCCCCCCCc
Q psy6995 319 TVIPALSDGTPRR 331 (342)
Q Consensus 319 ~VipP~~dg~PRR 331 (342)
+|....+--.|.+
T Consensus 88 ~v~R~g~~p~~s~ 100 (101)
T 1uez_A 88 SVYSAGRISGPSS 100 (101)
T ss_dssp EECCCCCCSSSSC
T ss_pred EEEECCccCCCCC
Confidence 8876544434443
No 14
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=99.29 E-value=2.2e-11 Score=93.92 Aligned_cols=80 Identities=28% Similarity=0.425 Sum_probs=70.3
Q ss_pred CCCceEEEeecCCCCCCCeEEcCC-c-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhccCcEEEEEe
Q psy6995 246 GSPAQELTLKRNGLGQLGFHVQPD-G-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTSSLVTVTVI 321 (342)
Q Consensus 246 Gcet~El~LrR~~~gqLGFhV~~E-G-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts~~V~v~Vi 321 (342)
....+.+.|.|+. ..|||.+..+ | +|..|.++++|++|||++||+| |||++|.+++|.+++.+++....|+|+|.
T Consensus 6 ~~~~r~v~l~~~~-~~~G~~l~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~g~~v~l~v~ 84 (93)
T 2dls_A 6 SGVQRCVIIQKDQ-HGFGFTVSGDRIVLVQSVRPGGAAMKAGVKEGDRIIKVNGTMVTNSSHLEVVKLIKSGAYVALTLL 84 (93)
T ss_dssp CCCEEEEEEECSS-SSCCEEEECSSSCEEEEECSSSTTTTTTCCSSCEEEEETTEECSSSCHHHHHHHHTSSSEEEEEEE
T ss_pred CCCCEEEEEEeCC-CceeEEEeCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHhhcCCCEEEEEEE
Confidence 3467888888876 6799999765 4 7999999999999999999999 99999999999999999998778999999
Q ss_pred CCCCC
Q psy6995 322 PALSD 326 (342)
Q Consensus 322 pP~~d 326 (342)
.+.++
T Consensus 85 R~~~~ 89 (93)
T 2dls_A 85 GSSSG 89 (93)
T ss_dssp CCCCC
T ss_pred ECCCC
Confidence 86544
No 15
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=99.29 E-value=1.7e-11 Score=94.28 Aligned_cols=77 Identities=17% Similarity=0.379 Sum_probs=67.2
Q ss_pred ceEEEeecCCCCCCCeEEcCC--c--eEEEEcccchhhh-hCCCCCCEE--eecccccCCCHHHHHHHHhccC-cEEEEE
Q psy6995 249 AQELTLKRNGLGQLGFHVQPD--G--LVTEVEHMGLAYQ-EGLKQGCRL--ICKVAVSTLSHDQMVDLLKTSS-LVTVTV 320 (342)
Q Consensus 249 t~El~LrR~~~gqLGFhV~~E--G--~Vt~VE~~g~Ae~-AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts~-~V~v~V 320 (342)
.+.+.|.++....|||.+..+ | +|.+|.++|+|++ |||++||+| |||++|..++|++++++|+... .|.|++
T Consensus 2 ~r~V~l~K~~~~~lG~~i~~~~~~~~~I~~V~~gspA~~~agL~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~~v~l~v 81 (88)
T 1kwa_A 2 SRLVQFQKNTDEPMGITLKMNELNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKI 81 (88)
T ss_dssp CEEEEEEECSSSCCCEEEECSCGGGEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHHHHHHHHHCCEEEEEEE
T ss_pred eEEEEEEeCCCCceeEEEEeCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCcEEEEE
Confidence 467788888668899999863 3 8999999999999 899999999 9999999999999999998544 788888
Q ss_pred eCCCC
Q psy6995 321 IPALS 325 (342)
Q Consensus 321 ipP~~ 325 (342)
.++..
T Consensus 82 ~r~~~ 86 (88)
T 1kwa_A 82 VPSYR 86 (88)
T ss_dssp ECCCC
T ss_pred ECCcC
Confidence 88753
No 16
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.28 E-value=2.4e-11 Score=95.49 Aligned_cols=76 Identities=26% Similarity=0.402 Sum_probs=68.3
Q ss_pred CCceEEEeecCCCCCCCeEEcCC-----c-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhccCcEEE
Q psy6995 247 SPAQELTLKRNGLGQLGFHVQPD-----G-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTSSLVTV 318 (342)
Q Consensus 247 cet~El~LrR~~~gqLGFhV~~E-----G-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts~~V~v 318 (342)
.++++++|.|+..+.|||.+... | +|..|.++++|++|||++||+| |||+.|.+++|++++++|+....|+|
T Consensus 14 ~~~~~v~l~k~~~~~lG~~~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~v~l 93 (104)
T 1wi2_A 14 FLPRIVTLKKPPGAQLGFNIRGGKASQLGIFISKVIPDSDAHRAGLQEGDQVLAVNDVDFQDIEHSKAVEILKTAREISM 93 (104)
T ss_dssp SCCEEEEECCCTTCCCSEEEECCSSSCCCCEEEEECTTSHHHHHTCCTTCEEEEETTEECSSCCHHHHHHHHHHSSSEEE
T ss_pred CCCEEEEEEeCCCCCccEEEEcccCCCCCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCEEEE
Confidence 35789999998878999999752 3 7999999999999999999999 99999999999999999998778888
Q ss_pred EEeC
Q psy6995 319 TVIP 322 (342)
Q Consensus 319 ~Vip 322 (342)
+|..
T Consensus 94 ~v~r 97 (104)
T 1wi2_A 94 RVRF 97 (104)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 8864
No 17
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.28 E-value=1.7e-11 Score=96.28 Aligned_cols=85 Identities=27% Similarity=0.396 Sum_probs=70.6
Q ss_pred CCCceEEEeecCCCCCCCeEEcC-----------Cc-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHH
Q psy6995 246 GSPAQELTLKRNGLGQLGFHVQP-----------DG-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLL 310 (342)
Q Consensus 246 Gcet~El~LrR~~~gqLGFhV~~-----------EG-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlL 310 (342)
-++..+++|.|... .|||.+.. .| +|++|.++++|++|| |++||+| |||++|..++|++++.+|
T Consensus 5 ~~~~~~v~l~~~~~-glG~~l~~g~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l 83 (105)
T 1wha_A 5 SSGRHVACLARSER-GLGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSLL 83 (105)
T ss_dssp CCEEEEEEECCCTT-CCSCEEECCTTSCCSSTTCCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHHHHH
T ss_pred CCeeEEEEEEeCCC-ccCEEEEeccCCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 45677888988764 59999974 24 899999999999999 9999999 999999999999999999
Q ss_pred hcc-CcEEEEEeCCCCCCCCCcC
Q psy6995 311 KTS-SLVTVTVIPALSDGTPRRY 332 (342)
Q Consensus 311 rts-~~V~v~VipP~~dg~PRRg 332 (342)
+.. ..|+|+|... .++.|..|
T Consensus 84 ~~~g~~v~l~v~R~-~~~~~~~g 105 (105)
T 1wha_A 84 TAASPTIALLLERE-AGSGPSSG 105 (105)
T ss_dssp TSCCSCEEEEEEEC-CCCCCSCC
T ss_pred HcCCCeEEEEEEEC-CCCCCCCC
Confidence 864 4788887765 46666543
No 18
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=99.27 E-value=7.1e-12 Score=102.37 Aligned_cols=80 Identities=23% Similarity=0.335 Sum_probs=69.2
Q ss_pred CCCceEEEeecCCCCCCCeEEcCC--------c-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhcc
Q psy6995 246 GSPAQELTLKRNGLGQLGFHVQPD--------G-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTS 313 (342)
Q Consensus 246 Gcet~El~LrR~~~gqLGFhV~~E--------G-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts 313 (342)
.+..+.+.|.+...+.|||.+... | +|.+|.++|+|++|| |++||+| |||++|..++|++++.+|+.+
T Consensus 22 ~~~~~~v~l~k~~~~~lGf~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~ 101 (118)
T 3b76_A 22 SMHEKVVNIQKDPGESLGMTVAGGASHREWDLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLKRT 101 (118)
T ss_dssp EEEEEEEEEECCTTCCCCEEEEECSCSTTCCCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHHHHHHHHSC
T ss_pred CCCcEEEEEEeCCCCccCEEEecCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 345677888887678999999643 2 899999999999999 9999999 999999999999999999965
Q ss_pred C-cEEEEEeCCCC
Q psy6995 314 S-LVTVTVIPALS 325 (342)
Q Consensus 314 ~-~V~v~VipP~~ 325 (342)
. .|+|+|+++.+
T Consensus 102 ~~~v~L~v~R~~~ 114 (118)
T 3b76_A 102 SSSIVLKALEVKE 114 (118)
T ss_dssp CSEEEEEEEEEEE
T ss_pred CCeEEEEEEECCC
Confidence 4 78999887654
No 19
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.26 E-value=2.9e-11 Score=96.39 Aligned_cols=81 Identities=21% Similarity=0.336 Sum_probs=70.3
Q ss_pred CCceEEEeecCCCCCCCeEEcC------Cc-------eEEEEcccchhhh-hCCCCCCEE--eecccccCCCHHHHHHHH
Q psy6995 247 SPAQELTLKRNGLGQLGFHVQP------DG-------LVTEVEHMGLAYQ-EGLKQGCRL--ICKVAVSTLSHDQMVDLL 310 (342)
Q Consensus 247 cet~El~LrR~~~gqLGFhV~~------EG-------~Vt~VE~~g~Ae~-AGLR~G~RL--Icg~sV~~lsHeq~vdlL 310 (342)
.++++++|.|++...|||.+.. .| +|..|.++++|++ |||++||+| |||++|.+++|++++++|
T Consensus 9 ~~~~~v~l~~~~~~~lGf~l~~~~~~~~~g~~~~~~~~V~~V~~~spA~~~agL~~GD~I~~ing~~v~~~~~~~~~~~l 88 (114)
T 1uew_A 9 LQTSDVVIHRKENEGFGFVIISSLNRPESGSTITVPHKIGRIIDGSPADRCAKLKVGDRILAVNGQSIINMPHADIVKLI 88 (114)
T ss_dssp CCCEEEEEECCTTSCCCEEEECCCCSCCSSCCSCCSCEEEEECTTCTTGGGSSCCTTCBEEEETTBCTTTSCHHHHHHHH
T ss_pred ccceEEEEEECCCCCCCEEEEeecccCCCCcccccCeEEEEECCCChHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4678999999888899999953 12 8999999999999 999999999 999999999999999999
Q ss_pred hcc-CcEEEEEeCCCCCC
Q psy6995 311 KTS-SLVTVTVIPALSDG 327 (342)
Q Consensus 311 rts-~~V~v~VipP~~dg 327 (342)
+.. ..|.|+|.+.....
T Consensus 89 ~~~g~~v~l~v~r~~~~~ 106 (114)
T 1uew_A 89 KDAGLSVTLRIIPQEELN 106 (114)
T ss_dssp HHTTTEEEEEECCCSCCC
T ss_pred HcCCCeEEEEEEeCCcCC
Confidence 864 47889988765443
No 20
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=99.26 E-value=1.2e-11 Score=94.64 Aligned_cols=80 Identities=20% Similarity=0.376 Sum_probs=67.2
Q ss_pred CCceEEEeecCCCCCCCeEEcCC----c-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhcc-CcEEE
Q psy6995 247 SPAQELTLKRNGLGQLGFHVQPD----G-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTS-SLVTV 318 (342)
Q Consensus 247 cet~El~LrR~~~gqLGFhV~~E----G-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts-~~V~v 318 (342)
.+++.+.|.|.. .+|||.+... | +|..|.++++|++|||++||+| |||++|.+.+|++++++|+.. ..+.+
T Consensus 4 ~~~r~v~l~~~~-~~~G~~l~~~~~~~~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~ 82 (95)
T 3r68_A 4 HQPRVVVIKKGS-NGYGFYLRAGPEQKGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQTTL 82 (95)
T ss_dssp CCCEEEEEECBT-TBCSCEEEEC--CCSEEEECCCTTSHHHHHTCCTTEEEEEETTEECTTCCHHHHHHHHHTTTTEEEE
T ss_pred CCcEEEEEecCC-CcccEEEEecCCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEE
Confidence 357888898865 6899999644 3 6999999999999999999999 999999999999999999964 47888
Q ss_pred EEeCCCCCC
Q psy6995 319 TVIPALSDG 327 (342)
Q Consensus 319 ~VipP~~dg 327 (342)
+++.++.+.
T Consensus 83 ~~~r~~~~~ 91 (95)
T 3r68_A 83 LVLDKELER 91 (95)
T ss_dssp EEEECC---
T ss_pred EEECCcccc
Confidence 888776543
No 21
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=99.25 E-value=2.4e-11 Score=93.48 Aligned_cols=78 Identities=21% Similarity=0.330 Sum_probs=63.0
Q ss_pred EEEeecC-CCCCCCeEEcCCceEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhccC-cEEEEEeCCCC
Q psy6995 251 ELTLKRN-GLGQLGFHVQPDGLVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTSS-LVTVTVIPALS 325 (342)
Q Consensus 251 El~LrR~-~~gqLGFhV~~EG~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts~-~V~v~VipP~~ 325 (342)
.++|.+. ...+|||.+..-=+|.+|.++|+|++|| |++||+| |||+++..++|++++++|+.+. .|+|++.|+.+
T Consensus 3 ~v~l~~~~~~~~~G~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~v~L~v~~~~~ 82 (88)
T 3e17_A 3 GVLLMKSRANEEYGLRLGSQIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKSRGKLQLVVLRDLE 82 (88)
T ss_dssp EEEEECBTTBCCCCEEEEEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHTTTEEEEEECCC--
T ss_pred EEEEEeCCCCCCCCEEEeCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEeCCCc
Confidence 3555553 4479999997534899999999999999 9999999 9999999999999999999544 89999998876
Q ss_pred CCC
Q psy6995 326 DGT 328 (342)
Q Consensus 326 dg~ 328 (342)
+-.
T Consensus 83 ~~~ 85 (88)
T 3e17_A 83 HHH 85 (88)
T ss_dssp ---
T ss_pred ccc
Confidence 543
No 22
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=99.25 E-value=2.1e-11 Score=92.07 Aligned_cols=74 Identities=20% Similarity=0.339 Sum_probs=64.0
Q ss_pred CceEEEeecCCCCCCCeEEcCC-----c-eEEEEcccchhhh-hCCCCCCEE--eecccccCCCHHHHHHHHhccC-cEE
Q psy6995 248 PAQELTLKRNGLGQLGFHVQPD-----G-LVTEVEHMGLAYQ-EGLKQGCRL--ICKVAVSTLSHDQMVDLLKTSS-LVT 317 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~E-----G-~Vt~VE~~g~Ae~-AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts~-~V~ 317 (342)
++++++|.|+...+|||.+... | +|..|.++|+|++ |||++||+| |||++|..++|++++.+|+... .++
T Consensus 2 ~~~~v~l~~~~~~~lG~~i~~~~~~~~~~~V~~V~~gspA~~~agl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~ 81 (87)
T 4e34_A 2 PIRKVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGEIE 81 (87)
T ss_dssp CCEEEEEECCTTBCCCEEEEEEGGGTEEEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHHCCSEEE
T ss_pred CEEEEEEEECCCCcccEEEEccCCCCCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 4688999998878999999632 2 8999999999999 799999999 9999999999999999998654 566
Q ss_pred EEEe
Q psy6995 318 VTVI 321 (342)
Q Consensus 318 v~Vi 321 (342)
|+|.
T Consensus 82 l~v~ 85 (87)
T 4e34_A 82 FEVV 85 (87)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6653
No 23
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=99.25 E-value=3e-11 Score=92.99 Aligned_cols=78 Identities=27% Similarity=0.421 Sum_probs=68.3
Q ss_pred CceEEEeecCCCCCCCeEEcCC-------c-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhcc-CcE
Q psy6995 248 PAQELTLKRNGLGQLGFHVQPD-------G-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTS-SLV 316 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~E-------G-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts-~~V 316 (342)
.++.++|.|.. .+|||.+..+ | +|+.|.++++|++|||++||+| |||++|.+++|++++++|+.. ..|
T Consensus 3 ~~r~v~l~k~~-~~~G~~l~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v 81 (96)
T 2v90_A 3 KPRCLHLEKGP-QGFGFLLREEKGLDGRPGQFLWEVDPGLPAKKAGMQAGDRLVAVAGESVEGLGHEETVSRIQGQGSCV 81 (96)
T ss_dssp CCEEEEEECBT-TBSCEEEEEEECTTSCEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHTTTTEE
T ss_pred CCEEEEEEeCC-CcccEEEEeccCCCCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEE
Confidence 57889999976 4899999763 3 8999999999999999999999 999999999999999999864 479
Q ss_pred EEEEeCCCCC
Q psy6995 317 TVTVIPALSD 326 (342)
Q Consensus 317 ~v~VipP~~d 326 (342)
.|+|..+.+.
T Consensus 82 ~l~v~r~~~~ 91 (96)
T 2v90_A 82 SLTVVDPEAD 91 (96)
T ss_dssp EEEEECCCTT
T ss_pred EEEEECCCCc
Confidence 9999876544
No 24
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.24 E-value=4.2e-11 Score=91.24 Aligned_cols=76 Identities=28% Similarity=0.429 Sum_probs=65.7
Q ss_pred CCceEEEeecCCCCCCCeEEcC-----Cc-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhcc-CcE
Q psy6995 247 SPAQELTLKRNGLGQLGFHVQP-----DG-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTS-SLV 316 (342)
Q Consensus 247 cet~El~LrR~~~gqLGFhV~~-----EG-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts-~~V 316 (342)
..++.++|.|.. .+|||.+.. .| +|+.|.++++|++|| |++||+| |||++|..++|++++.+|+.. ..|
T Consensus 4 ~~~r~v~l~k~~-~glG~~l~~~~~~~~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v 82 (93)
T 2dkr_A 4 GSSGVVELPKTD-EGLGFNIMGGKEQNSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAAQGSV 82 (93)
T ss_dssp SCSCEEEEECCT-TCCCEEEECSSSSSCCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHHHCCSEE
T ss_pred CCCEEEEEEeCC-CCccEEEecccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcE
Confidence 467889999876 899999963 23 899999999999996 9999999 999999999999999999854 468
Q ss_pred EEEEeCC
Q psy6995 317 TVTVIPA 323 (342)
Q Consensus 317 ~v~VipP 323 (342)
+|+|...
T Consensus 83 ~l~v~r~ 89 (93)
T 2dkr_A 83 KLVVRSG 89 (93)
T ss_dssp EEEECCC
T ss_pred EEEEEeC
Confidence 8888754
No 25
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=99.24 E-value=3.1e-11 Score=92.57 Aligned_cols=79 Identities=19% Similarity=0.243 Sum_probs=65.8
Q ss_pred CceEEEeecCCCCCCCeEEcCCc--eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhcc-CcEEEEEeC
Q psy6995 248 PAQELTLKRNGLGQLGFHVQPDG--LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTS-SLVTVTVIP 322 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~EG--~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts-~~V~v~Vip 322 (342)
..+.++|.|.. .+|||.+..+. +|.+|.++++|++|||++||+| |||++|.+++|++++.+|+.. ..|.|+|..
T Consensus 3 ~~r~v~l~~~~-~g~G~~l~~~~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R 81 (91)
T 2f5y_A 3 RYRQITIPRGK-DGFGFTICCDSPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEIRSCPSEIILLVWR 81 (91)
T ss_dssp EEEEEEEECBT-TBTSEEEECSSSCEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEEEE
T ss_pred ceEEEEEEeCC-CCccEEEecCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEe
Confidence 35678888865 57999997553 8999999999999999999999 999999999999999999863 478888887
Q ss_pred CCCCC
Q psy6995 323 ALSDG 327 (342)
Q Consensus 323 P~~dg 327 (342)
+.+.-
T Consensus 82 ~~~~~ 86 (91)
T 2f5y_A 82 MVPQV 86 (91)
T ss_dssp CC---
T ss_pred CCCCC
Confidence 65443
No 26
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.24 E-value=3.8e-11 Score=94.54 Aligned_cols=77 Identities=31% Similarity=0.503 Sum_probs=66.7
Q ss_pred CCCceEEEeecCCCCCCCeEEcC-------------Cc-eEEEEcccchhhhh-CCCCCCEE--eecccccCCCHHHHHH
Q psy6995 246 GSPAQELTLKRNGLGQLGFHVQP-------------DG-LVTEVEHMGLAYQE-GLKQGCRL--ICKVAVSTLSHDQMVD 308 (342)
Q Consensus 246 Gcet~El~LrR~~~gqLGFhV~~-------------EG-~Vt~VE~~g~Ae~A-GLR~G~RL--Icg~sV~~lsHeq~vd 308 (342)
.+++++++|.|. .+.|||.+.. .| +|+.|.++++|++| ||++||+| |||++|..++|++++.
T Consensus 6 ~~~~~~v~l~k~-~~~lG~~i~g~~~~~~~~~~~~~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~~~~~~~~ 84 (107)
T 1uhp_A 6 SGKSLTLVLHRD-SGSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQAVE 84 (107)
T ss_dssp SSEEEEEEECCS-SSCCSEEEECCCSCCCCTTSSCSCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCCHHHHHH
T ss_pred CcEEEEEEEEeC-CCccCEEEEcCCCCcccccccCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 356788889997 5899999953 24 89999999999999 99999999 9999999999999999
Q ss_pred HHhcc-CcEEEEEeCC
Q psy6995 309 LLKTS-SLVTVTVIPA 323 (342)
Q Consensus 309 lLrts-~~V~v~VipP 323 (342)
+|+.. ..|.|+|+..
T Consensus 85 ~~~~~~~~v~l~v~R~ 100 (107)
T 1uhp_A 85 AFKTAKEPIVVQVLRR 100 (107)
T ss_dssp HHHHCCSSEEEEEEEC
T ss_pred HHHcCCCcEEEEEEeC
Confidence 99854 4788888754
No 27
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.23 E-value=4.4e-11 Score=96.41 Aligned_cols=86 Identities=14% Similarity=0.220 Sum_probs=73.4
Q ss_pred hccCCCCCceEEEeecCCCCCCCeEEcCC-----c--eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHH
Q psy6995 241 RAATPGSPAQELTLKRNGLGQLGFHVQPD-----G--LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLL 310 (342)
Q Consensus 241 ~~VT~Gcet~El~LrR~~~gqLGFhV~~E-----G--~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlL 310 (342)
+.+...-.++++.|.++....|||.+... + +|++|.++++|++|| |++||+| |||++|..++|++++++|
T Consensus 8 ~~~~~~~~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l 87 (117)
T 1v62_A 8 DTVANASGPLMVEIVKTPGSALGISLTTTSLRNKSVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLL 87 (117)
T ss_dssp CSSCCSSSSEEEEEECCTTCCCCCEEEEECCSSSCEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHH
T ss_pred ccccCCCCcEEEEEEcCCCCcccEEEEccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 34555667899999998778999999653 4 899999999999999 9999999 999999999999999999
Q ss_pred hcc-CcEEEEEeCCCCC
Q psy6995 311 KTS-SLVTVTVIPALSD 326 (342)
Q Consensus 311 rts-~~V~v~VipP~~d 326 (342)
+.. ..|+|+|.+....
T Consensus 88 ~~~g~~v~l~v~r~~~~ 104 (117)
T 1v62_A 88 ASISEKVRLEILPVPQS 104 (117)
T ss_dssp HSCSSEEEEEECCBTTB
T ss_pred HhCCCeEEEEEEECCCC
Confidence 853 4789998876543
No 28
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.23 E-value=4.5e-11 Score=93.07 Aligned_cols=76 Identities=24% Similarity=0.379 Sum_probs=68.3
Q ss_pred CceEEEeecCCCCCCCeEEcCC-----c-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhccCcEEEE
Q psy6995 248 PAQELTLKRNGLGQLGFHVQPD-----G-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTSSLVTVT 319 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~E-----G-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts~~V~v~ 319 (342)
..++++|.|...+.|||.+... | +|.+|.++++|++|||++||+| |||++|.+++|++++.+|+....|.|+
T Consensus 10 ~~~~v~l~~~~~~~lG~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~v~l~ 89 (100)
T 2eeh_A 10 IIHSVRVEKSPAGRLGFSVRGGSEHGLGIFVSKVEEGSSAERAGLCVGDKITEVNGLSLESTTMGSAVKVLTSSSRLHMM 89 (100)
T ss_dssp EECCEEECCCSSSSCSEEEECCTTTTCCEEEEEECTTSHHHHHTCCSSCEEEEETTEECSSCCHHHHHHHHHSCSSEEEE
T ss_pred eEEEEEEEECCCCCccEEEEccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHhhcCCCEEEEE
Confidence 4677889998888999999754 4 7999999999999999999999 999999999999999999987789999
Q ss_pred EeCC
Q psy6995 320 VIPA 323 (342)
Q Consensus 320 VipP 323 (342)
|...
T Consensus 90 v~R~ 93 (100)
T 2eeh_A 90 VRRM 93 (100)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 8763
No 29
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=99.22 E-value=8.6e-11 Score=90.80 Aligned_cols=80 Identities=23% Similarity=0.361 Sum_probs=66.9
Q ss_pred CCCCceEEEeecCCCCCCCeEEcCC-----c-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhcc-C
Q psy6995 245 PGSPAQELTLKRNGLGQLGFHVQPD-----G-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTS-S 314 (342)
Q Consensus 245 ~Gcet~El~LrR~~~gqLGFhV~~E-----G-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts-~ 314 (342)
.|.+...+.|.|. .+.|||.+... | +|..|.++++|++|| |++||+| |||++|...+|++++++|+.. .
T Consensus 2 ~~~~~~~v~l~~~-~~~lG~~i~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~ 80 (97)
T 1n7e_A 2 SGAIIYTVELKRY-GGPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGE 80 (97)
T ss_dssp -CCCEEEEEEECT-TSCCCEEEECCSSTTSCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCS
T ss_pred CCceEEEEEEEeC-CCCcCEEEEcccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 4666788888776 36799999653 3 799999999999999 9999999 999999999999999999843 4
Q ss_pred cEEEEEeCCCC
Q psy6995 315 LVTVTVIPALS 325 (342)
Q Consensus 315 ~V~v~VipP~~ 325 (342)
.|.|+|....+
T Consensus 81 ~v~l~v~R~~~ 91 (97)
T 1n7e_A 81 TVTLKIKKQTD 91 (97)
T ss_dssp EEEEEEECCCC
T ss_pred eEEEEEEeCCC
Confidence 78888876543
No 30
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=99.22 E-value=3.1e-11 Score=98.07 Aligned_cols=78 Identities=21% Similarity=0.312 Sum_probs=67.4
Q ss_pred CceEEEeecCCCCCCCeEEcCC-c-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhccC--cEEEEEe
Q psy6995 248 PAQELTLKRNGLGQLGFHVQPD-G-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTSS--LVTVTVI 321 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~E-G-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts~--~V~v~Vi 321 (342)
.++.+.|.|. .+++||.+... + +|..|.++++|++|||++||+| |||++|...+|++++++|+... .|.|+|+
T Consensus 23 ~~r~v~l~k~-~~~~G~~l~~~~~v~V~~V~~gspA~~AGL~~GD~Il~VnG~~v~~~~~~dv~~~i~~~~~~~v~l~V~ 101 (109)
T 2vsv_A 23 MPRSIRFTAE-EGDLGFTLRGNAPVQVHFLDPYCSASVAGAREGDYIVSIQLVDCKWLTLSEVMKLLKSFGEDEIEMKVV 101 (109)
T ss_dssp SCEEEEECCG-GGCCCEEEESSSSCEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTSCEEEEEE
T ss_pred CCEEEEEEeC-CCceeEEEeCCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEE
Confidence 5788999994 58999999754 3 5999999999999999999999 9999999999999999998544 3999999
Q ss_pred CCCCC
Q psy6995 322 PALSD 326 (342)
Q Consensus 322 pP~~d 326 (342)
+|.+.
T Consensus 102 ~~~~~ 106 (109)
T 2vsv_A 102 SLLDE 106 (109)
T ss_dssp SCC--
T ss_pred ECCCc
Confidence 88653
No 31
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=99.22 E-value=2.9e-11 Score=96.19 Aligned_cols=78 Identities=19% Similarity=0.305 Sum_probs=68.0
Q ss_pred CceEEEeecCCCCCCCeEEcC-------Cc-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhcc---
Q psy6995 248 PAQELTLKRNGLGQLGFHVQP-------DG-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTS--- 313 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~-------EG-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts--- 313 (342)
+++++.|.|.....|||.+.. .| +|.+|.++|+|++|| |++||+| |||++|..++|++++++|+..
T Consensus 5 ~~~~v~l~k~~~~~lG~~i~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~ 84 (108)
T 3cbz_A 5 NIITVTLNMEKYNFLGISIVGQSNERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDIVHK 84 (108)
T ss_dssp CEEEEEECHHHHCCCCEEEEEECSSTTCCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHHHHTS
T ss_pred eEEEEEEEeCCCCccCEEEEcCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcccC
Confidence 577888988766889999964 23 899999999999999 9999999 999999999999999999865
Q ss_pred -CcEEEEEeCCCC
Q psy6995 314 -SLVTVTVIPALS 325 (342)
Q Consensus 314 -~~V~v~VipP~~ 325 (342)
..|+|+|..+.+
T Consensus 85 ~~~v~l~v~R~~~ 97 (108)
T 3cbz_A 85 PGPIVLTVAKSGG 97 (108)
T ss_dssp SSCEEEEEECCCC
T ss_pred CCeEEEEEEeCCC
Confidence 369999988643
No 32
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.22 E-value=5.5e-11 Score=94.97 Aligned_cols=78 Identities=23% Similarity=0.320 Sum_probs=68.0
Q ss_pred CceEEEeecCCCCCCCeEEcC--------------Cc-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHH
Q psy6995 248 PAQELTLKRNGLGQLGFHVQP--------------DG-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDL 309 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~--------------EG-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdl 309 (342)
+++.+.|.|.....|||.+.. .| +|..|.++++|++|| |++||+| |||++|.+++|++++.+
T Consensus 15 ~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~ 94 (117)
T 2ehr_A 15 PPRIVEIFREPNVSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHSEAVEA 94 (117)
T ss_dssp CCEEEEECCCSSSCCCEEECCCCSCCCSSCCCSCCCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHHHHHHH
T ss_pred CCEEEEEEeCCCCccCEEEeCCcccccccccCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 578899999877899999942 24 799999999999999 9999999 99999999999999999
Q ss_pred Hhcc-CcEEEEEeCCCC
Q psy6995 310 LKTS-SLVTVTVIPALS 325 (342)
Q Consensus 310 Lrts-~~V~v~VipP~~ 325 (342)
|+.. ..|+|+|.....
T Consensus 95 ~~~~g~~v~l~v~r~~~ 111 (117)
T 2ehr_A 95 IKNAGNPVVFIVQSLSS 111 (117)
T ss_dssp HHTSCSSEEEEECCBSC
T ss_pred HHcCCCeEEEEEEECCC
Confidence 9965 478888876544
No 33
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=99.22 E-value=3.4e-11 Score=98.02 Aligned_cols=81 Identities=23% Similarity=0.403 Sum_probs=64.6
Q ss_pred CCCCCceEEEeecCCCCCCCeEEcCC--------c-eEEEEcccchhhhh-CCCCCCEE--eecccccCCCHHHHHHHHh
Q psy6995 244 TPGSPAQELTLKRNGLGQLGFHVQPD--------G-LVTEVEHMGLAYQE-GLKQGCRL--ICKVAVSTLSHDQMVDLLK 311 (342)
Q Consensus 244 T~Gcet~El~LrR~~~gqLGFhV~~E--------G-~Vt~VE~~g~Ae~A-GLR~G~RL--Icg~sV~~lsHeq~vdlLr 311 (342)
+.-.+.+++.|.|...+.|||.+... | +|..|.++|+|++| |||+||+| |||++|..++|++++.+|+
T Consensus 20 s~~~~~~~v~l~k~~~~~lGf~i~gg~~~~~~~~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~~~~~l~ 99 (120)
T 2iwo_A 20 FQSMGLRTVEMKKGPTDSLGISIAGGVGSPLGDVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQAVNLLK 99 (120)
T ss_dssp -----CEEEEEEC----CCCEEEEEEEEETTEEEEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHHHHHHHH
T ss_pred CCCCCcEEEEEEcCCCCCCCEEEecccCCCCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 34456889999998778999999642 3 79999999999999 99999999 9999999999999999999
Q ss_pred ccC-cEEEEEeCCC
Q psy6995 312 TSS-LVTVTVIPAL 324 (342)
Q Consensus 312 ts~-~V~v~VipP~ 324 (342)
.+. .|+|+|++..
T Consensus 100 ~~~~~v~l~v~r~g 113 (120)
T 2iwo_A 100 NASGSIEMQVVAGG 113 (120)
T ss_dssp HCCSEEEEEEECCT
T ss_pred cCCCeEEEEEEECC
Confidence 655 7999998754
No 34
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.22 E-value=3.3e-11 Score=93.22 Aligned_cols=79 Identities=18% Similarity=0.354 Sum_probs=67.5
Q ss_pred CceEEEeecCCCCCCCeEEcCC--c-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhcc-CcEEEEE
Q psy6995 248 PAQELTLKRNGLGQLGFHVQPD--G-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTS-SLVTVTV 320 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~E--G-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts-~~V~v~V 320 (342)
..+.+.|.|...+.|||.++.+ | +|++|.++++|++|| |++||+| |||++| ..+|++++++|+.. ..|.|+|
T Consensus 6 ~~r~v~l~k~~~~~lG~~i~~~~~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v-~~~~~~~~~~l~~~~~~v~l~v 84 (91)
T 2e7k_A 6 SGRMVGIRKTAGEHLGVTFRVEGGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPV-GSDPRALQELLRNASGSVILKI 84 (91)
T ss_dssp CSCBCCBCCCTTCCCCEEEEESSSSEEEEEECSSSHHHHHCCCCTTCEEEEETTEEC-TTCHHHHHHHHHTCCSSBCEEE
T ss_pred CcEEEEEEECCCCcEeEEEEecCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC-CCCHHHHHHHHHcCCCeEEEEE
Confidence 3566778887778999999765 3 799999999999987 9999999 999999 99999999999853 4789999
Q ss_pred eCCCCCC
Q psy6995 321 IPALSDG 327 (342)
Q Consensus 321 ipP~~dg 327 (342)
++....|
T Consensus 85 ~~~~~~~ 91 (91)
T 2e7k_A 85 LSGPSSG 91 (91)
T ss_dssp ECCSCCC
T ss_pred EECCcCC
Confidence 9876544
No 35
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=99.22 E-value=5.1e-11 Score=90.72 Aligned_cols=75 Identities=23% Similarity=0.298 Sum_probs=66.2
Q ss_pred CCceEEEeecCCCCCCCeEEcCC-----c-eEEEEcccchhhhh-CCCCCCEE--eecccccCCCHHHHHHHHhcc-CcE
Q psy6995 247 SPAQELTLKRNGLGQLGFHVQPD-----G-LVTEVEHMGLAYQE-GLKQGCRL--ICKVAVSTLSHDQMVDLLKTS-SLV 316 (342)
Q Consensus 247 cet~El~LrR~~~gqLGFhV~~E-----G-~Vt~VE~~g~Ae~A-GLR~G~RL--Icg~sV~~lsHeq~vdlLrts-~~V 316 (342)
++++.++|.|...+.|||.+... | +|.+|.++|+|++| ||++||+| |||++|.+++|++++.+++.. ..|
T Consensus 3 ~~~~~v~l~k~~~~~lG~~i~~~~~~~~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~~v 82 (90)
T 1qav_A 3 LQRRRVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEV 82 (90)
T ss_dssp SSCEEEEEECCTTTCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCCHHHHHHHHHTCCSEE
T ss_pred CccEEEEEEeCCCCCcCEEEEcccCCCCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeE
Confidence 46889999998889999999642 4 89999999999999 99999999 999999999999999999864 467
Q ss_pred EEEEe
Q psy6995 317 TVTVI 321 (342)
Q Consensus 317 ~v~Vi 321 (342)
+|+|.
T Consensus 83 ~l~v~ 87 (90)
T 1qav_A 83 VLEVK 87 (90)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77764
No 36
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=99.22 E-value=4.8e-11 Score=90.33 Aligned_cols=73 Identities=22% Similarity=0.293 Sum_probs=62.7
Q ss_pred EEEeecCCCCCCCeEEcCC-----c-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhcc-CcEEEEEe
Q psy6995 251 ELTLKRNGLGQLGFHVQPD-----G-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTS-SLVTVTVI 321 (342)
Q Consensus 251 El~LrR~~~gqLGFhV~~E-----G-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts-~~V~v~Vi 321 (342)
.+++.+.+.+.|||.+... | +|.+|.++++|++|||++||+| |||+++.+++|+++.++|+.. ..|.|+|.
T Consensus 3 ~~~v~~~~~~~lG~~l~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~ 82 (87)
T 2pa1_A 3 ALTVDVAGPAPWGFRITGGRDFHTPIMVTKVAERGKAKDADLRPGDIIVAINGESAEGMLHAEAQSKIRQSPSPLRLQLD 82 (87)
T ss_dssp EEEEEECSSSCCSEEEEEEGGGTEEEEEEEECSSSHHHHTTCCTTCEEEEETTEESTTCCHHHHHHHHHTCCSSEEEEEE
T ss_pred EEEEEECCCCccCEEEecccCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEE
Confidence 3556667778999999632 3 8999999999999999999999 999999999999999999865 47888886
Q ss_pred CC
Q psy6995 322 PA 323 (342)
Q Consensus 322 pP 323 (342)
..
T Consensus 83 R~ 84 (87)
T 2pa1_A 83 RI 84 (87)
T ss_dssp EC
T ss_pred ec
Confidence 53
No 37
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=99.21 E-value=2.2e-11 Score=91.46 Aligned_cols=75 Identities=17% Similarity=0.329 Sum_probs=65.3
Q ss_pred CceEEEeecCCCCCCCeEEcCC-c-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhcc-CcEEEEEeC
Q psy6995 248 PAQELTLKRNGLGQLGFHVQPD-G-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTS-SLVTVTVIP 322 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~E-G-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts-~~V~v~Vip 322 (342)
.++++.|.|.. .+|||.+..+ | +|.+|.++++|++|||++||+| |||++|.+.+|++++++|+.. ..|.|+|..
T Consensus 2 ~~r~v~l~~~~-~g~G~~~~~~~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R 80 (83)
T 2kv8_A 2 RVRSVEVARGR-AGYGFTLSGQAPCVLSCVMRGSPADFVGLRAGDQILAVNEINVKKASHEDVVKLIGKCSGVLHMVIAE 80 (83)
T ss_dssp CEEEEEECCCS-SCCSCBCCCSSSCBCCBCCTTSTTTTTTCCTTCEEEEETTEECSSCCHHHHHHHHTTCSSCEEEEEEC
T ss_pred CcEEEEEEeCC-CcccEEEEcCCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEc
Confidence 36788999977 6799999655 3 8999999999999999999999 999999999999999999854 468888875
Q ss_pred C
Q psy6995 323 A 323 (342)
Q Consensus 323 P 323 (342)
.
T Consensus 81 ~ 81 (83)
T 2kv8_A 81 G 81 (83)
T ss_dssp C
T ss_pred C
Confidence 4
No 38
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=99.21 E-value=7.4e-11 Score=95.77 Aligned_cols=93 Identities=22% Similarity=0.410 Sum_probs=76.7
Q ss_pred ChhhHHHHHHhhhccCCCCCceEEEeecCCCCCCCeEEcC---C-----c-eEEEEcccchhhhhC-CCCCCEE--eecc
Q psy6995 229 DRDELMEVVVRLRAATPGSPAQELTLKRNGLGQLGFHVQP---D-----G-LVTEVEHMGLAYQEG-LKQGCRL--ICKV 296 (342)
Q Consensus 229 ~~edl~EIV~RL~~VT~Gcet~El~LrR~~~gqLGFhV~~---E-----G-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~ 296 (342)
+.+|+.+++..+ .++.+.+++.|.|...+.|||.+.. . | +|.+|.++|+|++|| |++||+| |||+
T Consensus 9 ~~~~~~~~~~~~---~~~~~~~~v~l~k~~~~~lG~~i~g~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~ 85 (128)
T 2db5_A 9 GNEDFNSVIQQM---AQGRQIEYIDIERPSTGGLGFSVVALRSQNLGKVDIFVKDVQPGSVADRDQRLKENDQILAINHT 85 (128)
T ss_dssp CSSCHHHHHHHH---HTTCEEEEEEEECCSSSCCCCEEEEEECSSSSCEEEEEECCCTTSHHHHTCCCCSSCBEEEESSC
T ss_pred CcHhHHHHHHhh---cccCceEEEEEEECCCCccCEEEecccCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCE
Confidence 346666655444 4578899999999877899999942 1 4 799999999999999 9999999 9999
Q ss_pred ccc-CCCHHHHHHHHhcc-CcEEEEEeCCC
Q psy6995 297 AVS-TLSHDQMVDLLKTS-SLVTVTVIPAL 324 (342)
Q Consensus 297 sV~-~lsHeq~vdlLrts-~~V~v~VipP~ 324 (342)
+|. .++|++++.+|+.. ..|.|+|....
T Consensus 86 ~v~~~~~~~~~~~~l~~~~~~v~l~v~r~~ 115 (128)
T 2db5_A 86 PLDQNISHQQAIALLQQTTGSLRLIVAREP 115 (128)
T ss_dssp BCSTTSCHHHHHHHHHHCCSEEEEEEEECC
T ss_pred ECCCCCCHHHHHHHHHcCCCeEEEEEEcCC
Confidence 998 99999999999864 47888887653
No 39
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=99.21 E-value=5e-11 Score=91.81 Aligned_cols=77 Identities=21% Similarity=0.345 Sum_probs=66.5
Q ss_pred CCCceEEEeecCCCCCCCeEEcC-----------Cc-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHH
Q psy6995 246 GSPAQELTLKRNGLGQLGFHVQP-----------DG-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLL 310 (342)
Q Consensus 246 Gcet~El~LrR~~~gqLGFhV~~-----------EG-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlL 310 (342)
|-..++++|.|.+..+|||.+.. .| +|.+|.++++|++|| |++||+| |||++|.+.+|++++.+|
T Consensus 3 ge~~~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l 82 (98)
T 1ihj_A 3 GELIHMVTLDKTGKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLI 82 (98)
T ss_dssp CCEEEEEEEECTTSSSCCEEEEEEEECCSSSCCEEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CceEEEEEEEeCCCCCcCEEEeccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 44467899999877899999942 24 699999999999999 9999999 999999999999999999
Q ss_pred hccC-cEEEEEeC
Q psy6995 311 KTSS-LVTVTVIP 322 (342)
Q Consensus 311 rts~-~V~v~Vip 322 (342)
+... .|+|+|..
T Consensus 83 ~~~g~~v~l~v~R 95 (98)
T 1ihj_A 83 KEADFKIELEIQT 95 (98)
T ss_dssp HHSCSEEEEEEEE
T ss_pred hcCCCeEEEEEEe
Confidence 8644 68888765
No 40
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=99.20 E-value=6.4e-11 Score=94.40 Aligned_cols=80 Identities=21% Similarity=0.378 Sum_probs=67.0
Q ss_pred CCCCceEEEeecCCCCCCCeEEcC---Cc-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhccC-cE
Q psy6995 245 PGSPAQELTLKRNGLGQLGFHVQP---DG-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTSS-LV 316 (342)
Q Consensus 245 ~Gcet~El~LrR~~~gqLGFhV~~---EG-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts~-~V 316 (342)
.|.-.+.+.|.+.....|||.+.. .| +|+.|.++|+|++|| |++||+| |||++|..+++++++++|+... .|
T Consensus 9 ~~~~~~~v~l~K~~~~~lG~~l~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~~~~~~v 88 (97)
T 2ejy_A 9 SGHMVRLIQFEKVTEEPMGICLKLNEKQSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMKETKGMI 88 (97)
T ss_dssp ----CEEEEEEECSSSCCSEEEEECTTCCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHHHCCEEE
T ss_pred CCCccEEEEEEeCCCCCeeEEEEeCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 355678889988766899999974 24 789999999999999 9999999 9999999999999999998544 78
Q ss_pred EEEEeCCC
Q psy6995 317 TVTVIPAL 324 (342)
Q Consensus 317 ~v~VipP~ 324 (342)
.|+|+|..
T Consensus 89 ~L~V~~~~ 96 (97)
T 2ejy_A 89 SLKVIPNQ 96 (97)
T ss_dssp EEEEECCC
T ss_pred EEEEEECC
Confidence 89988763
No 41
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=99.20 E-value=9.9e-11 Score=89.31 Aligned_cols=76 Identities=26% Similarity=0.431 Sum_probs=65.2
Q ss_pred CCceEEEeecCCCCCCCeEEcC----------Cc-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhc
Q psy6995 247 SPAQELTLKRNGLGQLGFHVQP----------DG-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKT 312 (342)
Q Consensus 247 cet~El~LrR~~~gqLGFhV~~----------EG-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrt 312 (342)
++.++++|.|.. .+|||.+.. .| +|.+|.++++|++|| |++||+| |||++|..++|++++.+|+.
T Consensus 2 ~~~~~v~l~k~~-~g~G~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~ 80 (94)
T 2fe5_A 2 MTIMEVNLLKGP-KGLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKN 80 (94)
T ss_dssp CCEEEEEEECCT-TCSCEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHT
T ss_pred cEEEEEEEEECC-CCCCEEEEcccCCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 356889998875 679999962 13 899999999999999 9999999 99999999999999999985
Q ss_pred cC-cEEEEEeCC
Q psy6995 313 SS-LVTVTVIPA 323 (342)
Q Consensus 313 s~-~V~v~VipP 323 (342)
.. .|.|+|..+
T Consensus 81 ~~~~v~l~v~R~ 92 (94)
T 2fe5_A 81 TSDMVYLKVAKP 92 (94)
T ss_dssp CCSEEEEEEECC
T ss_pred CCCeEEEEEEcC
Confidence 44 788888654
No 42
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=99.20 E-value=5.8e-11 Score=91.86 Aligned_cols=72 Identities=24% Similarity=0.291 Sum_probs=61.4
Q ss_pred EEeecCCCCCCCeEEcCCc-------------eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhcc-Cc
Q psy6995 252 LTLKRNGLGQLGFHVQPDG-------------LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTS-SL 315 (342)
Q Consensus 252 l~LrR~~~gqLGFhV~~EG-------------~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts-~~ 315 (342)
++|.|. ...|||.++... +|+.|.++++|++|||++||+| |||++|..++|++++.+|+.. ..
T Consensus 6 v~l~~~-~~~~Gf~l~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~ 84 (99)
T 3khf_A 6 IVIHSS-GKKYGFSLRAIRVYMGDSDVYTVHHVVWSVEDGSPAQEAGLRAGDLITHINGESVLGLVHMDVVELLLKSGNK 84 (99)
T ss_dssp EEEEC--CCCCCEEEEEEEEESSSSSCEEEEEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHHSCSE
T ss_pred EEEEeC-CCCCcEEEEecccccCccccccCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCE
Confidence 556664 479999997542 6999999999999999999999 999999999999999999854 47
Q ss_pred EEEEEeCCC
Q psy6995 316 VTVTVIPAL 324 (342)
Q Consensus 316 V~v~VipP~ 324 (342)
|.|++.+..
T Consensus 85 v~l~v~r~~ 93 (99)
T 3khf_A 85 ISLRTTALE 93 (99)
T ss_dssp EEEEEECSC
T ss_pred EEEEEEECC
Confidence 888888754
No 43
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=99.19 E-value=6.4e-11 Score=91.90 Aligned_cols=75 Identities=27% Similarity=0.499 Sum_probs=65.3
Q ss_pred CCceEEEeecCCCCCCCeEEcC----------Cc-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhc
Q psy6995 247 SPAQELTLKRNGLGQLGFHVQP----------DG-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKT 312 (342)
Q Consensus 247 cet~El~LrR~~~gqLGFhV~~----------EG-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrt 312 (342)
-+.++++|.|.. +.|||.+.. .| +|.+|.++++|++|| |++||+| |||++|.+++|++++.+|+.
T Consensus 6 ~~~~~v~l~~~~-~~lG~~l~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~ 84 (101)
T 2jik_A 6 VTEEEINLTRGP-SGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRN 84 (101)
T ss_dssp EEEEEEEEECCT-TCCCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHT
T ss_pred CccEEEEEEeCC-CCCCEEEeccccCCCccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 356888999976 899999964 24 799999999999999 9999999 99999999999999999985
Q ss_pred cC-cEEEEEeC
Q psy6995 313 SS-LVTVTVIP 322 (342)
Q Consensus 313 s~-~V~v~Vip 322 (342)
.. .|.|+|..
T Consensus 85 ~g~~v~l~v~R 95 (101)
T 2jik_A 85 AGYAVSLRVQH 95 (101)
T ss_dssp CCSEEEEEEEE
T ss_pred CCCeEEEEEEe
Confidence 44 68888854
No 44
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=99.19 E-value=3.9e-11 Score=94.01 Aligned_cols=73 Identities=26% Similarity=0.393 Sum_probs=63.6
Q ss_pred CceEEEeecCCCCCCCeEEcC------------Cc-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhc
Q psy6995 248 PAQELTLKRNGLGQLGFHVQP------------DG-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKT 312 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~------------EG-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrt 312 (342)
.++++.|.|...+.|||.++. .| +|..|.++++|++|||++||+| |||++|..++|++++++|+.
T Consensus 15 ~~~~v~l~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~ 94 (104)
T 2z17_A 15 QRKLVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAGLQAGDVLANINGVSTEGFTYKQVVDLIRS 94 (104)
T ss_dssp CCCEEEEECCTTSCCSEEEEECCCCCCSSSCCSCCEEEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCHHHHHHHHHH
T ss_pred cceEEEEEeCCCCCccEEEEeeecccCCcccCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHHHh
Confidence 467788999877899999985 13 8999999999999999999999 99999999999999999986
Q ss_pred cC-cEEEEE
Q psy6995 313 SS-LVTVTV 320 (342)
Q Consensus 313 s~-~V~v~V 320 (342)
.. .|+|+|
T Consensus 95 ~~~~v~l~v 103 (104)
T 2z17_A 95 SGNLLTIET 103 (104)
T ss_dssp TTTEEEEEC
T ss_pred CCCcEEEEE
Confidence 55 566655
No 45
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.19 E-value=5.7e-11 Score=92.92 Aligned_cols=82 Identities=23% Similarity=0.364 Sum_probs=70.1
Q ss_pred CCCceEEEeecCCCCCCCeEEcC---C-c-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhcc-CcEE
Q psy6995 246 GSPAQELTLKRNGLGQLGFHVQP---D-G-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTS-SLVT 317 (342)
Q Consensus 246 Gcet~El~LrR~~~gqLGFhV~~---E-G-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts-~~V~ 317 (342)
...++.+.|.|. .+.|||.+.. + | +|.+|.++++|++|||++||+| |||++|..++|++++.+++.. ..+.
T Consensus 6 ~~~~r~v~l~k~-~~~~G~~l~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~ 84 (106)
T 2eei_A 6 SGQPRLCYLVKE-GGSYGFSLKTVQGKKGVYMTDITPQGVAMRAGVLADDHLIEVNGENVEDASHEEVVEKVKKSGSRVM 84 (106)
T ss_dssp CSSSEEEEEECC-SSSCSCCEECCSSCCSCEECCCCTTSHHHHHTCCSSEEEEEETTEECTTCCHHHHHHHHHHHCSEEE
T ss_pred CCCCEEEEEEEC-CCCCCEEEEeccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEE
Confidence 346788999995 5799999942 2 3 8999999999999999999999 999999999999999999854 5789
Q ss_pred EEEeCCCCCCC
Q psy6995 318 VTVIPALSDGT 328 (342)
Q Consensus 318 v~VipP~~dg~ 328 (342)
++++.+..+..
T Consensus 85 l~v~r~~~~~~ 95 (106)
T 2eei_A 85 FLLVDKETDKR 95 (106)
T ss_dssp EEECCTTTSCC
T ss_pred EEEEcCchhhH
Confidence 99998876653
No 46
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.19 E-value=7.8e-11 Score=94.33 Aligned_cols=79 Identities=24% Similarity=0.298 Sum_probs=69.4
Q ss_pred CCCceEEEeecCCCCCCCeEEcCC-----c-eEEEEcccchhhhh--CCCCCCEE--eecccccCCCHHHHHHHHhcc--
Q psy6995 246 GSPAQELTLKRNGLGQLGFHVQPD-----G-LVTEVEHMGLAYQE--GLKQGCRL--ICKVAVSTLSHDQMVDLLKTS-- 313 (342)
Q Consensus 246 Gcet~El~LrR~~~gqLGFhV~~E-----G-~Vt~VE~~g~Ae~A--GLR~G~RL--Icg~sV~~lsHeq~vdlLrts-- 313 (342)
.-+.+.++|.|...+.|||.+... | +|++|.++|+|++| ||++||+| |||++|..++|++++++|+..
T Consensus 13 ~~~~~~v~l~k~~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~a~gGL~~GD~Il~ing~~v~~~~~~~~~~~~~~~~~ 92 (119)
T 2cs5_A 13 HDNLVLIRMKPDENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCE 92 (119)
T ss_dssp SSCCEEEEECCCSSSCCSEEEEEEGGGTEEEEEEEECSSSTTTSSSSCCCTTCEEEEETTBCTTSSCHHHHHHHHHHHHH
T ss_pred CCCeEEEEEEeCCCCCcCEEEecccCCCCCeEEEEECCCCHHHHhhcCCCCCCEEEEECCEECCCCCHHHHHHHHHhccc
Confidence 346788999998888999999643 3 89999999999999 99999999 999999999999999999865
Q ss_pred ---CcEEEEEeCCC
Q psy6995 314 ---SLVTVTVIPAL 324 (342)
Q Consensus 314 ---~~V~v~VipP~ 324 (342)
..|.|+|.+..
T Consensus 93 ~~~~~v~l~v~R~~ 106 (119)
T 2cs5_A 93 RHSGELMLLVRPNA 106 (119)
T ss_dssp CCSSCEEEEEECCC
T ss_pred cCCCEEEEEEEccc
Confidence 47899887654
No 47
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=99.19 E-value=8.8e-11 Score=92.14 Aligned_cols=77 Identities=29% Similarity=0.452 Sum_probs=66.3
Q ss_pred CceEEEeecCCCCCCCeEEcC----------Cc-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhcc
Q psy6995 248 PAQELTLKRNGLGQLGFHVQP----------DG-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTS 313 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~----------EG-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts 313 (342)
.+++++|.|.. ++|||.+.+ .| +|.+|.++|+|++|| |++||+| |||++|..++|++++.+++..
T Consensus 3 ~~~~v~l~k~~-~glG~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 81 (105)
T 2awx_A 3 KIMEIKLIKGP-KGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTALKNT 81 (105)
T ss_dssp CEEEEEEECBT-TBSSEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHSC
T ss_pred eEEEEEEEECC-CCCCEEEeCccCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 35788888876 689999963 24 899999999999999 9999999 999999999999999999865
Q ss_pred C-cEEEEEeCCCC
Q psy6995 314 S-LVTVTVIPALS 325 (342)
Q Consensus 314 ~-~V~v~VipP~~ 325 (342)
. .|.|+|..+..
T Consensus 82 ~~~v~l~v~R~~~ 94 (105)
T 2awx_A 82 SDFVYLKVAKPTS 94 (105)
T ss_dssp CSEEEEEEECCCC
T ss_pred CCeEEEEEEcCCC
Confidence 4 78999987643
No 48
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=99.18 E-value=1e-10 Score=93.47 Aligned_cols=79 Identities=16% Similarity=0.211 Sum_probs=67.7
Q ss_pred CCceEEEeecCCCCCCCeEEcC--Cc-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhcc-CcEEEE
Q psy6995 247 SPAQELTLKRNGLGQLGFHVQP--DG-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTS-SLVTVT 319 (342)
Q Consensus 247 cet~El~LrR~~~gqLGFhV~~--EG-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts-~~V~v~ 319 (342)
+++.++.|.+....+|||.+.. .| +|.+|.++|+|++|| ||+||+| |||++|.+++|++++.+++.. ..|.|+
T Consensus 1 ~~~~~v~L~k~~~~glG~~i~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~~~v~l~ 80 (106)
T 2la8_A 1 LEKFNVDLMKKAGKELGLSLSPNEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGANGKVSME 80 (106)
T ss_dssp CEEEEEEECCBSSSTTCCEEEECSSSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHHSCBSCEEEE
T ss_pred CeEEEEEEEeCCCCccCEEEEeCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEE
Confidence 3577888987777789999853 35 799999999999999 9999999 999999999999999999854 478998
Q ss_pred EeCCCC
Q psy6995 320 VIPALS 325 (342)
Q Consensus 320 VipP~~ 325 (342)
|..+.+
T Consensus 81 v~R~~~ 86 (106)
T 2la8_A 81 VTRPKP 86 (106)
T ss_dssp EEECCS
T ss_pred EEeCCC
Confidence 887643
No 49
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=99.18 E-value=4.7e-11 Score=90.70 Aligned_cols=75 Identities=25% Similarity=0.389 Sum_probs=64.6
Q ss_pred CceEEEeecCCCCCCCeEEcC-----Cc-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhccC---c
Q psy6995 248 PAQELTLKRNGLGQLGFHVQP-----DG-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTSS---L 315 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~-----EG-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts~---~ 315 (342)
+.++++|.|.. .+|||.+.. ++ +|.+|.++|+|++|| |++||+| |||++|..++|++++++|+... .
T Consensus 2 ~~~~v~l~~~~-~g~G~~~~~g~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~ 80 (90)
T 2q9v_A 2 MEQDIFLWRKE-TGFGFRILGGNEPGEPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQAAKQGH 80 (90)
T ss_dssp EEEEEEEECBT-TBCCEEEEECSSTTSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTE
T ss_pred CcEEEEEEECC-CccCEEEEccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCe
Confidence 46788899987 679999963 23 899999999999999 9999999 9999999999999999998543 6
Q ss_pred EEEEEeCC
Q psy6995 316 VTVTVIPA 323 (342)
Q Consensus 316 V~v~VipP 323 (342)
|.|+|...
T Consensus 81 v~l~v~R~ 88 (90)
T 2q9v_A 81 VNLTVRQT 88 (90)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEec
Confidence 88888643
No 50
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=99.18 E-value=5.1e-11 Score=94.93 Aligned_cols=90 Identities=26% Similarity=0.436 Sum_probs=75.2
Q ss_pred hhHHHHHHhhhccCCCCCceEEEeecCCCCCCCeEEcC--------Cc-eEEEEcccchhhhhC-CCCCCEE--eecccc
Q psy6995 231 DELMEVVVRLRAATPGSPAQELTLKRNGLGQLGFHVQP--------DG-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAV 298 (342)
Q Consensus 231 edl~EIV~RL~~VT~Gcet~El~LrR~~~gqLGFhV~~--------EG-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV 298 (342)
+++...+.. ...+.+.+.+.|.|...++|||.+.+ .| +|++|.++|+|++|| |++||+| |||++|
T Consensus 6 ~~~~~~~~~---~~~~~~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v 82 (117)
T 2o2t_A 6 DEFDQLIKN---MAQGRHVEVFELLKPPSGGLGFSVVGLRSENRGELGIFVQEIQEGSVAHRDGRLKETDQILAINGQAL 82 (117)
T ss_dssp HHHHHHHHH---HHTTSCEEEEEEECCSSSCSSCCEEEEECCC--CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEEC
T ss_pred HHHHHHHHh---hccCCeEEEEEEEECCCCCCCEEEeecccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEEC
Confidence 555555543 45678899999999877899999963 24 799999999999999 9999999 999999
Q ss_pred c-CCCHHHHHHHHhcc-CcEEEEEeCC
Q psy6995 299 S-TLSHDQMVDLLKTS-SLVTVTVIPA 323 (342)
Q Consensus 299 ~-~lsHeq~vdlLrts-~~V~v~VipP 323 (342)
. .++|++++.+|+.. ..|.|+|...
T Consensus 83 ~~~~~~~~~~~~l~~~~~~v~l~v~R~ 109 (117)
T 2o2t_A 83 DQTITHQQAISILQKAKDTVQLVIARG 109 (117)
T ss_dssp CTTSCHHHHHHHHHHCCSEEEEEEESS
T ss_pred CCCCCHHHHHHHHHcCCCEEEEEEEeC
Confidence 8 99999999999854 4788888764
No 51
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.18 E-value=5.7e-11 Score=93.14 Aligned_cols=78 Identities=26% Similarity=0.393 Sum_probs=66.4
Q ss_pred CCceEEEeecCCCCCCCeEEcC-----Cc-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhcc---C
Q psy6995 247 SPAQELTLKRNGLGQLGFHVQP-----DG-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTS---S 314 (342)
Q Consensus 247 cet~El~LrR~~~gqLGFhV~~-----EG-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts---~ 314 (342)
.+.++++|.|. ...|||.+.. .| +|..|.++++|++|| |++||+| |||++|..++|++++++|+.. .
T Consensus 8 ~~~~~v~l~~~-~~g~G~~i~~g~~~~~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~ 86 (103)
T 1uep_A 8 YKELDVHLRRM-ESGFGFRILGGDEPGQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHAARNG 86 (103)
T ss_dssp EEEECCEEESS-SSSCCEEECCCCSTTSCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHT
T ss_pred ceEEEEEEEeC-CCccCEEEeeecCCCCCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCC
Confidence 35667778884 4679999975 23 899999999999999 9999999 999999999999999999864 5
Q ss_pred cEEEEEeCCCC
Q psy6995 315 LVTVTVIPALS 325 (342)
Q Consensus 315 ~V~v~VipP~~ 325 (342)
.|+|+|.....
T Consensus 87 ~v~l~v~R~~~ 97 (103)
T 1uep_A 87 QVNLTVRRKVL 97 (103)
T ss_dssp EEEEEEEEECC
T ss_pred cEEEEEEeCCC
Confidence 79998876544
No 52
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=99.18 E-value=1.6e-10 Score=90.46 Aligned_cols=77 Identities=22% Similarity=0.316 Sum_probs=65.5
Q ss_pred CCceEEEeecCCCCCCCeEEcCCc--------eEEEEcccchhhh-hCCCCCCEE--eecccccCCCHHHHHHHHhc--c
Q psy6995 247 SPAQELTLKRNGLGQLGFHVQPDG--------LVTEVEHMGLAYQ-EGLKQGCRL--ICKVAVSTLSHDQMVDLLKT--S 313 (342)
Q Consensus 247 cet~El~LrR~~~gqLGFhV~~EG--------~Vt~VE~~g~Ae~-AGLR~G~RL--Icg~sV~~lsHeq~vdlLrt--s 313 (342)
.+.+++.+.+.....|||.+.+++ +|++|.++++|++ |||++||+| |||++|...+|++++++|+. .
T Consensus 8 ~~~~~v~l~k~~g~~lG~~i~~~~~~~~~~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~ 87 (101)
T 2yt7_A 8 DNCREVHLEKRRGEGLGVALVESGWGSLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRETKS 87 (101)
T ss_dssp CCCEEEEEECCTTCCCCEEEEECCCSSSSCCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHHHHTTT
T ss_pred CceEEEEEEeCCCCccCEEEEeCCCCCCccCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 357888888865579999996432 8999999999999 679999999 99999999999999999985 2
Q ss_pred -CcEEEEEeCC
Q psy6995 314 -SLVTVTVIPA 323 (342)
Q Consensus 314 -~~V~v~VipP 323 (342)
..|+|+|.++
T Consensus 88 g~~v~l~v~R~ 98 (101)
T 2yt7_A 88 QTSVTLSIVHC 98 (101)
T ss_dssp SSEEEEEECCC
T ss_pred CCeEEEEEEeC
Confidence 3688888654
No 53
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.17 E-value=1.2e-10 Score=93.15 Aligned_cols=77 Identities=21% Similarity=0.320 Sum_probs=65.4
Q ss_pred CceEEEeecCCCCCCCeEEcC-----C--c-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhccC--
Q psy6995 248 PAQELTLKRNGLGQLGFHVQP-----D--G-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTSS-- 314 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~-----E--G-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts~-- 314 (342)
+.+.+++.+. .+|||.+.. . + +|.+|.++|+|++|| |++||+| |||+++..++|++++++|+.+.
T Consensus 15 ~~~~v~l~k~--~glG~~i~gg~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~~~r 92 (109)
T 1wi4_A 15 AFRVITVTKE--TGLGLKILGGINRNEGPLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRAKLR 92 (109)
T ss_dssp TEEEEEECCS--SCCCEEEEECSSSSSCSSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHHHSCCS
T ss_pred cEEEEEEeCC--CccCEEEEeccCCCCCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHccccC
Confidence 4577888885 689999962 2 3 899999999999999 9999999 9999999999999999998543
Q ss_pred ---cEEEEEeCCCCC
Q psy6995 315 ---LVTVTVIPALSD 326 (342)
Q Consensus 315 ---~V~v~VipP~~d 326 (342)
.+.|.+++...+
T Consensus 93 ~~~~~~l~v~R~~~~ 107 (109)
T 1wi4_A 93 SESPWEIAFIRSGPS 107 (109)
T ss_dssp SSSCEEEEEECCCCC
T ss_pred CCceEEEEEEeCCCC
Confidence 688888876543
No 54
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=99.17 E-value=6.9e-11 Score=95.62 Aligned_cols=75 Identities=28% Similarity=0.455 Sum_probs=64.8
Q ss_pred CceEEEeecCCCCCCCeEEcC----------Cc-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhcc
Q psy6995 248 PAQELTLKRNGLGQLGFHVQP----------DG-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTS 313 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~----------EG-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts 313 (342)
+.+++.|.|.. .+|||.+.. .| +|++|.++|+|++|| |++||+| |||++|..++|++++.+|+..
T Consensus 24 ~~~~v~l~k~~-~glG~~i~gg~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 102 (117)
T 2byg_A 24 TVVEIKLFKGP-KGLGFSIAGGVGNQHIPGDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKNT 102 (117)
T ss_dssp EEEEEEEECBT-TBSSEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTC
T ss_pred ceEEEEEEeCC-CCcCEEEEcccCCCCccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 46778888776 899999973 13 899999999999999 9999999 999999999999999999954
Q ss_pred C-cEEEEEeCC
Q psy6995 314 S-LVTVTVIPA 323 (342)
Q Consensus 314 ~-~V~v~VipP 323 (342)
. .|+|+|..+
T Consensus 103 g~~v~l~v~R~ 113 (117)
T 2byg_A 103 SEVVYLKVGKP 113 (117)
T ss_dssp CSEEEEEEEEE
T ss_pred CCeEEEEEEeC
Confidence 4 788888754
No 55
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.17 E-value=1.9e-11 Score=99.41 Aligned_cols=77 Identities=29% Similarity=0.470 Sum_probs=65.9
Q ss_pred CceEEEeecCCCCCCCeEEcC---------------------------------Cc-eEEEEcccchhhhhCCCCCCEE-
Q psy6995 248 PAQELTLKRNGLGQLGFHVQP---------------------------------DG-LVTEVEHMGLAYQEGLKQGCRL- 292 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~---------------------------------EG-~Vt~VE~~g~Ae~AGLR~G~RL- 292 (342)
.++.++|.|.. .+|||+++. +| +|..|.++++|++|||++||+|
T Consensus 8 ~~r~v~l~r~~-~g~Gf~l~~~t~y~~~~~~~~~~~~~~~G~~~G~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~ 86 (126)
T 2yuy_A 8 GPKTVTLKRTS-QGFGFTLRHFIVYPPESAIQFSYKDEENGNRGGKQRNRLEPMDTIFVKQVKEGGPAFEAGLCTGDRII 86 (126)
T ss_dssp SCCCEEEECCS-SSCSCCBCCCCCCCCSSCCCSCSSSCCCCSCCCTTSCCCCCCCCCCBCCCCSSSHHHHHTCCSSCCCC
T ss_pred CCEEEEEEECC-CCcceeecCccccCCHHHHHHHHHhhcCcceeceeeecccCCCCEEEEEECCCChHHHcCCCCCCEEE
Confidence 46788899876 569999974 23 6899999999999999999999
Q ss_pred -eecccccCCCHHHHHHHHhccC-cEEEEEeCCCC
Q psy6995 293 -ICKVAVSTLSHDQMVDLLKTSS-LVTVTVIPALS 325 (342)
Q Consensus 293 -Icg~sV~~lsHeq~vdlLrts~-~V~v~VipP~~ 325 (342)
|||++|..++|++++++|+... .|.|+|.+..+
T Consensus 87 ~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~ 121 (126)
T 2yuy_A 87 KVNGESVIGKTYSQVIALIQNSDTTLELSVMPKDS 121 (126)
T ss_dssp EETTEECSSCCHHHHHHHHHTCTTEEEEECCCCCC
T ss_pred EECCEECCCCCHHHHHHHHHcCCCEEEEEEEECCC
Confidence 9999999999999999998644 78888876543
No 56
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=99.17 E-value=6.8e-11 Score=95.87 Aligned_cols=76 Identities=28% Similarity=0.453 Sum_probs=66.1
Q ss_pred CceEEEeecCCCCCCCeEEcCC--------c-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhcc-C
Q psy6995 248 PAQELTLKRNGLGQLGFHVQPD--------G-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTS-S 314 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~E--------G-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts-~ 314 (342)
+.++++|.|.. .+|||.+... | +|++|.++|+|++|| |++||+| |||++|..++|++++.+|+.. .
T Consensus 25 ~~~~v~L~k~~-~glGf~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~ 103 (117)
T 2fne_A 25 QCKSITLERGP-DGLGFSIVGGYGSPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKG 103 (117)
T ss_dssp EEEEEEECCBT-TBTSEEEEEEEEETTEEEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCS
T ss_pred ccEEEEEEeCC-CcccEEEecccCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 46789999987 6799999631 3 899999999999999 9999999 999999999999999999854 4
Q ss_pred cEEEEEeCCC
Q psy6995 315 LVTVTVIPAL 324 (342)
Q Consensus 315 ~V~v~VipP~ 324 (342)
.|+|+|.+..
T Consensus 104 ~v~l~v~R~g 113 (117)
T 2fne_A 104 TVTLMVLSSD 113 (117)
T ss_dssp SEEEEEEECS
T ss_pred eEEEEEEeCC
Confidence 7888887653
No 57
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.17 E-value=1.1e-10 Score=92.72 Aligned_cols=78 Identities=17% Similarity=0.278 Sum_probs=65.4
Q ss_pred CCCceEEEeecCCCCCCCeEEcCC------c-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhcc--
Q psy6995 246 GSPAQELTLKRNGLGQLGFHVQPD------G-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTS-- 313 (342)
Q Consensus 246 Gcet~El~LrR~~~gqLGFhV~~E------G-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts-- 313 (342)
|-..+.+.|+|.. .+|||.+... + +|..|.++++|++|| |++||+| |||+++..++|++++++|+.+
T Consensus 4 g~~~~~v~l~k~~-~glG~~i~gg~~~~~~~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~ 82 (103)
T 1ufx_A 4 GSSGTLVRVKKSA-ATLGIAIEGGANTRQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFK 82 (103)
T ss_dssp CSSSEEEEEECCS-SSCCEEEECBTTSSCSSCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHHHHH
T ss_pred CCceEEEEEEcCC-CcCCeEEECCCCCCCCcEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhcc
Confidence 4456778887755 7899999642 2 899999999999999 9999999 999999999999999999863
Q ss_pred ----CcEEEEEeCCC
Q psy6995 314 ----SLVTVTVIPAL 324 (342)
Q Consensus 314 ----~~V~v~VipP~ 324 (342)
..+.++|+.-.
T Consensus 83 ~~~~~~i~l~v~r~~ 97 (103)
T 1ufx_A 83 TKDRDYIDFLVTEFN 97 (103)
T ss_dssp CSSCSEEEEEECCCC
T ss_pred cCCCCeEEEEEEEcc
Confidence 25778877654
No 58
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=99.17 E-value=8e-11 Score=90.53 Aligned_cols=75 Identities=25% Similarity=0.407 Sum_probs=64.2
Q ss_pred CceEEEeecCCCCCCCeEEcCC---------c-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhcc-
Q psy6995 248 PAQELTLKRNGLGQLGFHVQPD---------G-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTS- 313 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~E---------G-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts- 313 (342)
++.+++|.|+. ..|||.+... | +|..|.++++|++|| |++||+| |||+++.+++|+++.++|+..
T Consensus 3 ~~~~v~l~k~~-~~lG~~i~~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g 81 (97)
T 2jil_A 3 RTVEVTLHKEG-NTFGFVIRGGAHDDRNKSRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQCG 81 (97)
T ss_dssp EEEEEEEECBT-TBCSEEEEEECCSCC--CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHSC
T ss_pred eEEEEEEEeCC-CccCEEEeCcccCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 46778888854 7899999532 3 699999999999999 9999999 999999999999999999963
Q ss_pred CcEEEEEeCC
Q psy6995 314 SLVTVTVIPA 323 (342)
Q Consensus 314 ~~V~v~VipP 323 (342)
..+.|+|...
T Consensus 82 ~~v~l~v~R~ 91 (97)
T 2jil_A 82 QEAALLIEYD 91 (97)
T ss_dssp SEEEEEEEEE
T ss_pred CeEEEEEEeC
Confidence 3688888754
No 59
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=99.17 E-value=1e-10 Score=89.88 Aligned_cols=76 Identities=21% Similarity=0.323 Sum_probs=65.5
Q ss_pred CceEEEeecCCC-CCCCeEEcC----Cc-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhcc-CcEE
Q psy6995 248 PAQELTLKRNGL-GQLGFHVQP----DG-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTS-SLVT 317 (342)
Q Consensus 248 et~El~LrR~~~-gqLGFhV~~----EG-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts-~~V~ 317 (342)
++.+++|.|... ..|||.+.. .| +|.+|.++|+|++|| |++||+| |||++|.+++|++++.+++.. ..|.
T Consensus 3 ~~~~v~l~k~~~~~~lG~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~ 82 (95)
T 2vwr_A 3 EILQVALHKRDSGEQLGIKLVRRTDEPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQASGERVN 82 (95)
T ss_dssp EEEEEEEECSSTTCCCCEEEEECSSSCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEE
T ss_pred EEEEEEEEECCCCCcccEEEEeccCCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEE
Confidence 567889999744 799999943 24 899999999999999 9999999 999999999999999999854 4788
Q ss_pred EEEeCC
Q psy6995 318 VTVIPA 323 (342)
Q Consensus 318 v~VipP 323 (342)
+++...
T Consensus 83 l~v~R~ 88 (95)
T 2vwr_A 83 LTIARP 88 (95)
T ss_dssp EEEEEE
T ss_pred EEEEcC
Confidence 888764
No 60
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=99.17 E-value=8.7e-11 Score=95.01 Aligned_cols=76 Identities=12% Similarity=0.189 Sum_probs=66.4
Q ss_pred CceEEEeecCCCCCCCeEEcC-----Cc-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhccC-cEE
Q psy6995 248 PAQELTLKRNGLGQLGFHVQP-----DG-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTSS-LVT 317 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~-----EG-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts~-~V~ 317 (342)
.+++++|.|+..+.|||.+.. .| +|..|.++|+|++|| |++||+| |||++|..++|++++.+|+... .|+
T Consensus 19 ~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~~v~ 98 (125)
T 3hpk_A 19 VPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVT 98 (125)
T ss_dssp EEEEEEEECCTTSCCCEEEEECSSCCSSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHSCSEEE
T ss_pred CCeEEEEEeCCCCCcCEEEeccCCCCCCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 467888999888999999853 23 799999999999999 9999999 9999999999999999999544 688
Q ss_pred EEEeCC
Q psy6995 318 VTVIPA 323 (342)
Q Consensus 318 v~VipP 323 (342)
|+|...
T Consensus 99 l~v~r~ 104 (125)
T 3hpk_A 99 IHYNKL 104 (125)
T ss_dssp EEEEEE
T ss_pred EEEEEC
Confidence 887654
No 61
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=99.17 E-value=5e-11 Score=91.17 Aligned_cols=77 Identities=23% Similarity=0.293 Sum_probs=64.3
Q ss_pred CceEEEeecCCCCCCCeEEcCC----c-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhc-cCcEEEE
Q psy6995 248 PAQELTLKRNGLGQLGFHVQPD----G-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKT-SSLVTVT 319 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~E----G-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrt-s~~V~v~ 319 (342)
+++.++|.|... .|||.+... | +|.+|.++++|++|||++||+| |||++|..++|+++.++|+. ...|.|+
T Consensus 3 ~pr~v~l~k~~~-~~G~~l~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~ 81 (91)
T 2vsp_A 3 KPKLCRLAKGEN-GYGFHLNAIRGLPGSFIKEVQKGGPADLAGLEDEDVIIEVNGVNVLDEPYEKVVDRIQSSGKNVTLL 81 (91)
T ss_dssp CEEEEEEECBTT-BTSCCCBCCTTCSCCBC-CCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHHTTSCSEEEEE
T ss_pred CcEEEEEEeCCC-cccEEEEeccCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEE
Confidence 468889999764 799999542 3 8999999999999999999999 99999999999999999986 4479999
Q ss_pred EeCCCC
Q psy6995 320 VIPALS 325 (342)
Q Consensus 320 VipP~~ 325 (342)
|..+..
T Consensus 82 v~r~~~ 87 (91)
T 2vsp_A 82 VCGKKA 87 (91)
T ss_dssp EEC---
T ss_pred EEeCCc
Confidence 987654
No 62
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.16 E-value=1.1e-10 Score=90.95 Aligned_cols=80 Identities=23% Similarity=0.434 Sum_probs=69.2
Q ss_pred CCCceEEEeecCCCCCCCeEEcCC----c-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhc-cCcEE
Q psy6995 246 GSPAQELTLKRNGLGQLGFHVQPD----G-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKT-SSLVT 317 (342)
Q Consensus 246 Gcet~El~LrR~~~gqLGFhV~~E----G-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrt-s~~V~ 317 (342)
+-.++.++|.|.. .+|||.+..+ | +|+.|.++++|++|||++||+| |||++|.+++|++++++|+. ...|.
T Consensus 4 ~~~~r~v~l~k~~-~g~G~~l~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~ 82 (102)
T 2d90_A 4 GSSGRVVVIKKGS-NGYGFYLRAGPEQKGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQTT 82 (102)
T ss_dssp CSSSEEEEEECCS-SSSSCEEEECSSSSSEEEECCCTTSTTTTTTCCTTCEEEEESSCBCTTSCHHHHHHHHHHSTTEEE
T ss_pred CCCCEEEEEeeCC-CCccEEEEeecCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEE
Confidence 4568899999966 5899999742 4 8999999999999999999999 99999999999999999986 45799
Q ss_pred EEEeCCCCC
Q psy6995 318 VTVIPALSD 326 (342)
Q Consensus 318 v~VipP~~d 326 (342)
|++..+...
T Consensus 83 l~v~r~~~~ 91 (102)
T 2d90_A 83 LLVLDKEAE 91 (102)
T ss_dssp EEECSTTCC
T ss_pred EEEEECCCc
Confidence 999876543
No 63
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=99.16 E-value=1.1e-10 Score=90.70 Aligned_cols=75 Identities=28% Similarity=0.426 Sum_probs=65.4
Q ss_pred CceEEEeecCCCCCCCeEEcC----------Cc-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhcc
Q psy6995 248 PAQELTLKRNGLGQLGFHVQP----------DG-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTS 313 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~----------EG-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts 313 (342)
+++++.|.|.. .+|||.+.. .| +|.+|.++|+|++|| |++||+| |||++|.+++|++++.+++..
T Consensus 4 ~~~~v~l~k~~-~glG~~i~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 82 (102)
T 2i1n_A 4 KYEEIVLERGN-SGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKEA 82 (102)
T ss_dssp EEEEEEEECBT-TBTSEEEEECTTSCSSTTCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHS
T ss_pred eEEEEEEEECC-CcCCEEEEcccCCCCcCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 57788899874 689999963 24 799999999999999 9999999 999999999999999999865
Q ss_pred -CcEEEEEeCC
Q psy6995 314 -SLVTVTVIPA 323 (342)
Q Consensus 314 -~~V~v~VipP 323 (342)
..|+|+|...
T Consensus 83 g~~v~l~v~R~ 93 (102)
T 2i1n_A 83 GPVVRLVVRRR 93 (102)
T ss_dssp CSEEEEEEEEE
T ss_pred CCeEEEEEEeC
Confidence 4788888754
No 64
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=99.16 E-value=1.1e-10 Score=91.41 Aligned_cols=75 Identities=25% Similarity=0.299 Sum_probs=65.2
Q ss_pred CceEEEeecCCCCCCCeEEcC-----Cc-eEEEEcccchhhhhC--CCCCCEE--eecccccCCCHHHHHHHHhccC---
Q psy6995 248 PAQELTLKRNGLGQLGFHVQP-----DG-LVTEVEHMGLAYQEG--LKQGCRL--ICKVAVSTLSHDQMVDLLKTSS--- 314 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~-----EG-~Vt~VE~~g~Ae~AG--LR~G~RL--Icg~sV~~lsHeq~vdlLrts~--- 314 (342)
..+.+.|.|...++|||.+.. .| +|..|.++++|++|| |++||+| |||++|..++|++++.+|+...
T Consensus 17 ~~~~v~l~~~~~~~~G~~~~gg~~~~~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~~ 96 (107)
T 3nfk_A 17 NLVLIRMKPDENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCERH 96 (107)
T ss_dssp CCEEEEECCCTTSCCCEEEEEEGGGTEEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHHHHCGGGSB
T ss_pred CEEEEEEEcCCCCCCCEEEEccCCCCCCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHHHHHHHhccccC
Confidence 367778888877999999964 13 899999999999999 9999999 9999999999999999998654
Q ss_pred --cEEEEEeC
Q psy6995 315 --LVTVTVIP 322 (342)
Q Consensus 315 --~V~v~Vip 322 (342)
.|.|+|.+
T Consensus 97 ~~~v~l~v~r 106 (107)
T 3nfk_A 97 SGELMLLVRP 106 (107)
T ss_dssp TTBEEEEEEC
T ss_pred CcEEEEEEEc
Confidence 78888754
No 65
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=99.16 E-value=1.5e-10 Score=87.57 Aligned_cols=74 Identities=18% Similarity=0.245 Sum_probs=62.0
Q ss_pred CceEEEeecCCCCCCCeEEcC-----Cc-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhcc-CcEEE
Q psy6995 248 PAQELTLKRNGLGQLGFHVQP-----DG-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTS-SLVTV 318 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~-----EG-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts-~~V~v 318 (342)
.+..++|+ +.+.|||.+.. .| +|.+|.++++|++|||++||+| |||++|.+.+|++++++++.. ..|.|
T Consensus 3 ~~~~v~l~--~~~~~G~~l~~g~~~~~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l 80 (88)
T 2uzc_A 3 SNYSVSLV--GPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQGMTHLEAQNKIKGCTGSLNM 80 (88)
T ss_dssp CEEEEEEE--SSSCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEE
T ss_pred cEEEEEEc--CCCcccEEEECcCCCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEE
Confidence 45667773 33689999963 23 8999999999999999999999 999999999999999999854 46888
Q ss_pred EEeCC
Q psy6995 319 TVIPA 323 (342)
Q Consensus 319 ~VipP 323 (342)
+|...
T Consensus 81 ~v~R~ 85 (88)
T 2uzc_A 81 TLQRE 85 (88)
T ss_dssp EEECC
T ss_pred EEEeC
Confidence 88653
No 66
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=99.16 E-value=2.5e-10 Score=87.61 Aligned_cols=75 Identities=27% Similarity=0.427 Sum_probs=65.2
Q ss_pred CCceEEEeecCCCCCCCeEEcC--------Cc-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhcc-
Q psy6995 247 SPAQELTLKRNGLGQLGFHVQP--------DG-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTS- 313 (342)
Q Consensus 247 cet~El~LrR~~~gqLGFhV~~--------EG-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts- 313 (342)
.+..++.|.|.. ..|||.+.. .| +|.+|.++++|++|| |++||+| |||++|..++|++++.+|+..
T Consensus 4 g~~~~v~l~k~~-~~lG~~i~~g~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g 82 (96)
T 1d5g_A 4 GDIFEVELAKND-NSLGISVTGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTG 82 (96)
T ss_dssp TCEEEEEEECSS-SSCCEEEECCSSSCSSSSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHSCC
T ss_pred CCEEEEEEEeCC-CCCCEEEECCCCCCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 457888898875 799999973 24 799999999999999 9999999 999999999999999999864
Q ss_pred CcEEEEEeC
Q psy6995 314 SLVTVTVIP 322 (342)
Q Consensus 314 ~~V~v~Vip 322 (342)
..|.|+|..
T Consensus 83 ~~v~l~v~R 91 (96)
T 1d5g_A 83 QVVHLLLEK 91 (96)
T ss_dssp SEEEEEEEC
T ss_pred CeEEEEEEc
Confidence 468888864
No 67
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.16 E-value=1.8e-10 Score=89.79 Aligned_cols=77 Identities=22% Similarity=0.254 Sum_probs=66.7
Q ss_pred CCceEEEeecCCCCCCCeEEcC------C-c-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhcc-C
Q psy6995 247 SPAQELTLKRNGLGQLGFHVQP------D-G-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTS-S 314 (342)
Q Consensus 247 cet~El~LrR~~~gqLGFhV~~------E-G-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts-~ 314 (342)
++..+++|.|.. .+|||.+.. + | +|.+|.++++|++|| |++||+| |||++|.+++|++++.+|+.. .
T Consensus 10 ~~~~~v~l~~~~-~g~G~~l~~~~~~~~~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~ 88 (104)
T 2djt_A 10 SGHFSVELVRGY-AGFGLTLGGGRDVAGDTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIRAGGP 88 (104)
T ss_dssp CCCEEEEEECCS-SSCCEEEECCEETTEECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHHHHTCS
T ss_pred CceEEEEEEeCC-CCccEEEEeccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 467888898876 689999975 2 2 899999999999999 9999999 999999999999999999863 4
Q ss_pred cEEEEEeCCC
Q psy6995 315 LVTVTVIPAL 324 (342)
Q Consensus 315 ~V~v~VipP~ 324 (342)
.|.|+|....
T Consensus 89 ~v~l~v~R~g 98 (104)
T 2djt_A 89 QLHLVIRRPL 98 (104)
T ss_dssp EEEEEECCCC
T ss_pred eEEEEEEECC
Confidence 7889887653
No 68
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=99.16 E-value=1.1e-10 Score=91.21 Aligned_cols=76 Identities=30% Similarity=0.413 Sum_probs=65.8
Q ss_pred ceEEEeecCCCCCCCeEEcCC----c-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhcc-CcEEEEE
Q psy6995 249 AQELTLKRNGLGQLGFHVQPD----G-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTS-SLVTVTV 320 (342)
Q Consensus 249 t~El~LrR~~~gqLGFhV~~E----G-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts-~~V~v~V 320 (342)
++.+.|.|.....|||.+... | +|..|.++++|++|||++||+| |||++|.+.+|++++++|+.. ..|+|+|
T Consensus 2 ~r~v~l~~~~~~~~G~~l~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v 81 (106)
T 3ngh_A 2 PRESKLSKQEGQNYGFFLRIEKDTDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELVRKSGNSVTLLV 81 (106)
T ss_dssp CEEEEEECCTTCCCCCEEECCTTCCSCEEECCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHHHHTTTEEEEEE
T ss_pred CEEEEEEeCCCCeeCEEEEEEeCCCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEEEE
Confidence 567888888778899998643 4 7999999999999999999999 999999999999999999744 4788888
Q ss_pred eCCC
Q psy6995 321 IPAL 324 (342)
Q Consensus 321 ipP~ 324 (342)
..+.
T Consensus 82 ~r~~ 85 (106)
T 3ngh_A 82 LDGD 85 (106)
T ss_dssp ECHH
T ss_pred EECC
Confidence 7543
No 69
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=99.15 E-value=9.9e-11 Score=94.12 Aligned_cols=78 Identities=27% Similarity=0.460 Sum_probs=63.3
Q ss_pred CCCceEEEeecCCC--CCCCeEEcC---C---c-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhccC
Q psy6995 246 GSPAQELTLKRNGL--GQLGFHVQP---D---G-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTSS 314 (342)
Q Consensus 246 Gcet~El~LrR~~~--gqLGFhV~~---E---G-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts~ 314 (342)
|..++.+.|.|... ..|||.+.. + | +|.+|.++++|++||||+||+| |||++|.+++|+++.++|+...
T Consensus 4 ~~~~~~v~i~k~~~~~~~~Gf~v~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~~l~~~l~~~~ 83 (94)
T 3kzd_A 4 GKVTHSIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMLKDFLSQPS 83 (94)
T ss_dssp CCEEEEEEEEC------CCSEEEEEECSSSSCEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHHHHHHHHSSE
T ss_pred ccceeEEEEEeCCCCcCCcCEEEEecCCCCcCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhCCe
Confidence 45678889999754 689999953 2 3 7999999999999999999999 9999999999999999998433
Q ss_pred -cEEEEEeCC
Q psy6995 315 -LVTVTVIPA 323 (342)
Q Consensus 315 -~V~v~VipP 323 (342)
.++|.++|+
T Consensus 84 l~ltV~~~p~ 93 (94)
T 3kzd_A 84 LGLLVRTYPE 93 (94)
T ss_dssp EEEEEEECCC
T ss_pred EEEEEEecCC
Confidence 566666765
No 70
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.15 E-value=1.4e-10 Score=91.15 Aligned_cols=76 Identities=26% Similarity=0.426 Sum_probs=66.3
Q ss_pred CCceEEEeecCCCCCCCeEEc-------------CCc-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHH
Q psy6995 247 SPAQELTLKRNGLGQLGFHVQ-------------PDG-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDL 309 (342)
Q Consensus 247 cet~El~LrR~~~gqLGFhV~-------------~EG-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdl 309 (342)
.+.+++.|.|.+ ..|||.+. ..| +|.+|.++|+|++|| |++||+| |||++|..++|++++.+
T Consensus 8 ~~~~~v~l~k~~-~~lG~~i~~~~~~gg~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~ 86 (108)
T 1q7x_A 8 GDIFEVELAKND-NSLGISVTVLFDKGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVET 86 (108)
T ss_dssp SSEEEEEEESSS-CSCCEEESSSSSSBCBCTTSSSCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSHHHHH
T ss_pred CcEEEEEEEECC-CCccEEEEEeccCCCccccCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 357888999876 78999998 135 799999999999999 9999999 99999999999999999
Q ss_pred Hhcc-CcEEEEEeCC
Q psy6995 310 LKTS-SLVTVTVIPA 323 (342)
Q Consensus 310 Lrts-~~V~v~VipP 323 (342)
++.. ..|+|++...
T Consensus 87 ~~~~g~~v~l~v~R~ 101 (108)
T 1q7x_A 87 LRNTGQVVHLLLEKG 101 (108)
T ss_dssp HHHTTSEEEEEEECC
T ss_pred HHcCCCeEEEEEEeC
Confidence 9865 4788888764
No 71
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.15 E-value=2e-10 Score=91.79 Aligned_cols=75 Identities=20% Similarity=0.357 Sum_probs=65.9
Q ss_pred CceEEEeecCCCCCCCeEEcCC--c-eEEEEcccchhhhhCC-CCCCEE--eecccccCCCHHHHHHHHhcc-CcEEEEE
Q psy6995 248 PAQELTLKRNGLGQLGFHVQPD--G-LVTEVEHMGLAYQEGL-KQGCRL--ICKVAVSTLSHDQMVDLLKTS-SLVTVTV 320 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~E--G-~Vt~VE~~g~Ae~AGL-R~G~RL--Icg~sV~~lsHeq~vdlLrts-~~V~v~V 320 (342)
..+.+.|.|.....|||.+... | +|++|.++++|++||| ++||+| |||+.|..++|++++.+|+.. ..|.|+|
T Consensus 25 ~~~~v~l~k~~~~~lG~~i~~~~~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v 104 (113)
T 1va8_A 25 TVKIVRIEKARDIPLGATVRNEMDSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDMHGTLTFVL 104 (113)
T ss_dssp ECEEEEEEECTTCCCCEEEEECSSSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCEEEEEEE
T ss_pred ceEEEEEEeCCCCceeEEEEeCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEE
Confidence 5677889998777999998643 3 8999999999999999 999999 999999999999999999854 4788888
Q ss_pred eC
Q psy6995 321 IP 322 (342)
Q Consensus 321 ip 322 (342)
.+
T Consensus 105 ~r 106 (113)
T 1va8_A 105 IP 106 (113)
T ss_dssp EC
T ss_pred EE
Confidence 85
No 72
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.15 E-value=8.8e-11 Score=92.99 Aligned_cols=76 Identities=28% Similarity=0.492 Sum_probs=65.5
Q ss_pred ceEEEeecCCCCCCCeEEcCC--------------c-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHH
Q psy6995 249 AQELTLKRNGLGQLGFHVQPD--------------G-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLL 310 (342)
Q Consensus 249 t~El~LrR~~~gqLGFhV~~E--------------G-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlL 310 (342)
.+++.|.|...+.|||.+... | +|++|.++++|++|| |++||+| |||++|..++|++++.+|
T Consensus 10 ~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l 89 (111)
T 1uju_A 10 LRELCIQKAPGERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQLL 89 (111)
T ss_dssp SSCEEEECCTTCCCCEEEECCSSSSCSCSSCTTCCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHHHHHH
T ss_pred cEEEEEEECCCCccCEEEECCccccccccccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 567888888778999999742 2 799999999999999 9999999 999999999999999999
Q ss_pred hccC-cEEEEEeCCC
Q psy6995 311 KTSS-LVTVTVIPAL 324 (342)
Q Consensus 311 rts~-~V~v~VipP~ 324 (342)
+... .|.|+|....
T Consensus 90 ~~~g~~v~l~v~r~~ 104 (111)
T 1uju_A 90 RSVGDTLTVLVCDGF 104 (111)
T ss_dssp SSCSSEEEECCCCCC
T ss_pred HcCCCeEEEEEEECC
Confidence 8654 6788776543
No 73
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.14 E-value=1.3e-10 Score=94.91 Aligned_cols=86 Identities=21% Similarity=0.287 Sum_probs=70.6
Q ss_pred CceEEEeecCCCC--CCCeEEcC------Cc-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhccCcE
Q psy6995 248 PAQELTLKRNGLG--QLGFHVQP------DG-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTSSLV 316 (342)
Q Consensus 248 et~El~LrR~~~g--qLGFhV~~------EG-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts~~V 316 (342)
+++++.|.|.+.. .|||.|.. .| +|+.|.++++|++||||+||+| |||++|.+++|+++.++|+.. .+
T Consensus 15 ~~~~v~l~k~~~~~~~~G~~v~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~-~v 93 (114)
T 2d8i_A 15 VTQSIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMLKDFLSQP-SL 93 (114)
T ss_dssp EEEEEEEECSCTTTCCCCCEEEEEEETTEEEEEEEECCTTSSHHHHTCCTTCCEEEESSCBGGGCCHHHHHHHHTSS-EE
T ss_pred ceEEEEEEeCCCCccccCEEEEecCcCCcCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHhCC-cE
Confidence 4678889998763 79999863 23 7999999999999999999999 999999999999999999864 78
Q ss_pred EEEEeCCCCCCCCCcCCCc
Q psy6995 317 TVTVIPALSDGTPRRYADL 335 (342)
Q Consensus 317 ~v~VipP~~dg~PRRgc~~ 335 (342)
.|+|..+.++ .+|..|.+
T Consensus 94 ~l~v~R~p~~-~~~~~~~~ 111 (114)
T 2d8i_A 94 GLLVRTYPEL-EEGVESGP 111 (114)
T ss_dssp EEEEEECCCS-CCSCCCSS
T ss_pred EEEEEECCCC-CcccccCC
Confidence 8888765443 55555654
No 74
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=99.14 E-value=2.7e-10 Score=88.42 Aligned_cols=77 Identities=23% Similarity=0.347 Sum_probs=65.2
Q ss_pred CceEEEeecCCCCCCCeEEcC--------------Cc-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHH
Q psy6995 248 PAQELTLKRNGLGQLGFHVQP--------------DG-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDL 309 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~--------------EG-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdl 309 (342)
.+..+.+.|...+.|||.++. .| +|++|.++|+|++|| |++||+| |||++|.+++|++++++
T Consensus 4 dp~~v~l~~~~~~~lG~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~ 83 (103)
T 2fcf_A 4 QPRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEA 83 (103)
T ss_dssp SCEEEEECCCC-CCCCEEEECCCC-------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred CCEEEEEEeCCCCceeEEEEccCCCCcccccCCCCCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 467788888877899999953 24 899999999999999 9999999 99999999999999999
Q ss_pred HhccC-cEEEEEeCCC
Q psy6995 310 LKTSS-LVTVTVIPAL 324 (342)
Q Consensus 310 Lrts~-~V~v~VipP~ 324 (342)
|+... .|.|+|....
T Consensus 84 l~~~~~~v~l~v~r~~ 99 (103)
T 2fcf_A 84 IRKAGNPVVFMVQSII 99 (103)
T ss_dssp HHTCCSSEEEEEECCC
T ss_pred HHhCCCcEEEEEEECC
Confidence 98544 7888887654
No 75
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.14 E-value=2.3e-10 Score=91.96 Aligned_cols=77 Identities=17% Similarity=0.307 Sum_probs=65.8
Q ss_pred CCceEEEeecCC------CCCCCeEEcCC----------c-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHH
Q psy6995 247 SPAQELTLKRNG------LGQLGFHVQPD----------G-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQM 306 (342)
Q Consensus 247 cet~El~LrR~~------~gqLGFhV~~E----------G-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~ 306 (342)
++.++++|.|.. ...|||.+... | +|.+|.++++|++|| |++||+| |||++|..++|+++
T Consensus 11 ~~~~~v~l~r~~~~~~~~~~glG~~i~g~~~~~~~~~~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~~ 90 (117)
T 1ujd_A 11 FPHARIKITRDSKDHTVSGNGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEV 90 (117)
T ss_dssp SCEEEEEECCCSSSSCSSCCSCSEEEEEEEECSSSSSCEEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHHH
T ss_pred CceEEEEEEecCcccCCCCCcccEEEeCCCCCCcccCCcCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHH
Confidence 456788899976 37899999421 3 799999999999999 9999999 99999999999999
Q ss_pred HHHHhccC-cEEEEEeCC
Q psy6995 307 VDLLKTSS-LVTVTVIPA 323 (342)
Q Consensus 307 vdlLrts~-~V~v~VipP 323 (342)
+.+|+... .|.|+|...
T Consensus 91 ~~~l~~~~~~v~l~v~R~ 108 (117)
T 1ujd_A 91 QSIISQQSGEAEICVRLD 108 (117)
T ss_dssp HHHHSCCSSCEEEEEESS
T ss_pred HHHHhcCCCEEEEEEEEC
Confidence 99998644 788888653
No 76
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=99.14 E-value=2.2e-10 Score=93.63 Aligned_cols=78 Identities=27% Similarity=0.398 Sum_probs=67.2
Q ss_pred CCceEEEeecCCC-CCCCeEEcC--------------Cc-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHH
Q psy6995 247 SPAQELTLKRNGL-GQLGFHVQP--------------DG-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMV 307 (342)
Q Consensus 247 cet~El~LrR~~~-gqLGFhV~~--------------EG-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~v 307 (342)
.+.+.+.|.|.+. +.|||.+.. .| +|+.|.++|+|++|| |++||+| |||++|...+|++++
T Consensus 28 ~~~r~v~l~k~~~~~~lG~~i~~~~~~~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~ 107 (128)
T 1nf3_C 28 ETHRRVRLCKYGTEKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVT 107 (128)
T ss_dssp TTCEEEEECCSSTTSCCCEEEEEEEEEEEETTEEEEEEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCHHHHH
T ss_pred CccEEEEEEECCCCCCccEEEEccccccccccccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 4578899999864 899999952 24 799999999999999 9999999 999999999999999
Q ss_pred HHHhcc-CcEEEEEeCCC
Q psy6995 308 DLLKTS-SLVTVTVIPAL 324 (342)
Q Consensus 308 dlLrts-~~V~v~VipP~ 324 (342)
.+|+.. ..|+|+|.+..
T Consensus 108 ~~l~~~~~~v~l~v~r~~ 125 (128)
T 1nf3_C 108 DMMIANSRNLIITVRPAN 125 (128)
T ss_dssp HHHHHTTTSEEEEEECCC
T ss_pred HHHHcCCCeEEEEEEECC
Confidence 999843 47999888753
No 77
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.14 E-value=8.2e-11 Score=91.62 Aligned_cols=81 Identities=22% Similarity=0.383 Sum_probs=68.5
Q ss_pred ceEEEeecCCC-CCCCeEEcCC-c-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhc-cCcEEEEEeC
Q psy6995 249 AQELTLKRNGL-GQLGFHVQPD-G-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKT-SSLVTVTVIP 322 (342)
Q Consensus 249 t~El~LrR~~~-gqLGFhV~~E-G-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrt-s~~V~v~Vip 322 (342)
+++++|.|+.. +.|||.+..+ | +|++|.++++|+ |||++||+| |||++|.+++|++++.+++. ...|.|+|..
T Consensus 9 ~~~v~l~~~~~~~~~G~~l~~~~~~~V~~V~~~spA~-agL~~GD~Il~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R 87 (96)
T 2edv_A 9 RHTVKIDKDTLLQDYGFHISESLPLTVVAVTAGGSAH-GKLFPGDQILQMNNEPAEDLSWERAVDILREAEDSLSITVVR 87 (96)
T ss_dssp EEEEEECCCSSSCSCSBCCCSSSSCBCCCBCSSSSST-TTSCTTCBEEEESSCBSTTCCHHHHHHHHHHCSSCEEEEEEE
T ss_pred cEEEEEEECCCCCcccEEEecCCCeEEEEECCCCchh-hCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEE
Confidence 57788999865 6899999765 3 899999999996 999999999 99999999999999999995 4579999987
Q ss_pred CCCCCCCCc
Q psy6995 323 ALSDGTPRR 331 (342)
Q Consensus 323 P~~dg~PRR 331 (342)
+. .+.|..
T Consensus 88 ~~-~~~p~s 95 (96)
T 2edv_A 88 CT-SSGPSS 95 (96)
T ss_dssp CC-CCSSCC
T ss_pred CC-CCCCCC
Confidence 65 445543
No 78
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=99.13 E-value=1.6e-10 Score=87.83 Aligned_cols=73 Identities=19% Similarity=0.263 Sum_probs=60.3
Q ss_pred ceEEEeecCCCCCCCeEEcC-----Cc-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhcc-CcEEEE
Q psy6995 249 AQELTLKRNGLGQLGFHVQP-----DG-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTS-SLVTVT 319 (342)
Q Consensus 249 t~El~LrR~~~gqLGFhV~~-----EG-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts-~~V~v~ 319 (342)
+.++++. +.+.|||.+.. .| +|.+|.++++|++|||++||+| |||++|.+++|++++.+++.. ..|.++
T Consensus 4 ~~~v~~~--~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~ 81 (89)
T 2q3g_A 4 SFKVVLE--GPAPWGFRLQGGKDFNVPLSISRLTPGGKAAQAGVAVGDWVLSIDGENAGSLTHIEAQNKIRACGERLSLG 81 (89)
T ss_dssp EEEEEEE--SSSCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHHHHHHHHTCTTEEEEE
T ss_pred EEEEEEc--CCCcccEEEECcCCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEEE
Confidence 3445554 45789999964 23 7999999999999999999999 999999999999999999854 468888
Q ss_pred EeCC
Q psy6995 320 VIPA 323 (342)
Q Consensus 320 VipP 323 (342)
|...
T Consensus 82 v~R~ 85 (89)
T 2q3g_A 82 LSRA 85 (89)
T ss_dssp EEEE
T ss_pred EEeC
Confidence 8653
No 79
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=99.13 E-value=2.4e-10 Score=85.92 Aligned_cols=71 Identities=18% Similarity=0.298 Sum_probs=60.7
Q ss_pred eEEEeecCCCCCCCeEEcC--C---c-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhcc---CcEE
Q psy6995 250 QELTLKRNGLGQLGFHVQP--D---G-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTS---SLVT 317 (342)
Q Consensus 250 ~El~LrR~~~gqLGFhV~~--E---G-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts---~~V~ 317 (342)
.+++|.|.. .+|||.+.. + | +|.+|.++++|++|| |++||+| |||++|..++|+++.++|+.. ..|.
T Consensus 2 ~~v~l~k~~-~g~G~~i~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~ 80 (85)
T 2i04_A 2 IHTKLRKSS-RGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVD 80 (85)
T ss_dssp EEEEEECBT-TBSSEEEEECCSTTBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCTTCEEE
T ss_pred EEEEEEECC-CCCCEEEEcccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEE
Confidence 467788865 579999964 2 2 899999999999999 9999999 999999999999999999864 4677
Q ss_pred EEEe
Q psy6995 318 VTVI 321 (342)
Q Consensus 318 v~Vi 321 (342)
++|.
T Consensus 81 l~v~ 84 (85)
T 2i04_A 81 LELC 84 (85)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7764
No 80
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.13 E-value=2.6e-10 Score=86.74 Aligned_cols=75 Identities=23% Similarity=0.311 Sum_probs=64.3
Q ss_pred CCceEEEeecCCC-CCCCeEEcC----Cc-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhccC-cEE
Q psy6995 247 SPAQELTLKRNGL-GQLGFHVQP----DG-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTSS-LVT 317 (342)
Q Consensus 247 cet~El~LrR~~~-gqLGFhV~~----EG-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts~-~V~ 317 (342)
.++.+++|.|... ..|||.+.. .| +|.+|.++++|++|||++||+| |||++|.+.+|++++.+++... .|.
T Consensus 5 ~~~~~v~l~k~~~~~~~G~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~ 84 (91)
T 1m5z_A 5 VELHKVTLYKDSGMEDFGFSVADGLLEKGVYVKNIRPAGPGDLGGLKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLD 84 (91)
T ss_dssp CEEEEEEEECCTTCSSSSEEEEECTTSSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTSTTEEE
T ss_pred cceEEEEEEECCCCCCccEEEEeccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEE
Confidence 4678889998754 689999953 25 6999999999999999999999 9999999999999999998544 677
Q ss_pred EEEe
Q psy6995 318 VTVI 321 (342)
Q Consensus 318 v~Vi 321 (342)
|+|.
T Consensus 85 l~v~ 88 (91)
T 1m5z_A 85 LVIS 88 (91)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7775
No 81
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.13 E-value=1.3e-10 Score=91.45 Aligned_cols=77 Identities=16% Similarity=0.283 Sum_probs=66.5
Q ss_pred CCCceEEEeecCCCCCCCeEEcC-----------Cc-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHH
Q psy6995 246 GSPAQELTLKRNGLGQLGFHVQP-----------DG-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLL 310 (342)
Q Consensus 246 Gcet~El~LrR~~~gqLGFhV~~-----------EG-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlL 310 (342)
.++..++.|.|.. ..|||.+.. .| +|.+|.++++|++|| |++||+| |||++|..++|++++.+|
T Consensus 7 ~~~~~~v~l~k~~-~glG~~i~~~~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~ 85 (107)
T 1wf8_A 7 GLELFPVELEKDE-DGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVL 85 (107)
T ss_dssp CEEEEEEEEECBT-TBSCEEEEEEEESCCTTCCEEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHHHHHHH
T ss_pred CceEEEEEEEECC-CcccEEEEecCCCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4567788888875 589999976 13 899999999999999 9999999 999999999999999999
Q ss_pred hccC-cEEEEEeCC
Q psy6995 311 KTSS-LVTVTVIPA 323 (342)
Q Consensus 311 rts~-~V~v~VipP 323 (342)
+... .|.|+|...
T Consensus 86 ~~~~~~v~l~v~R~ 99 (107)
T 1wf8_A 86 RNTKGNVRFVIGRE 99 (107)
T ss_dssp HHCCSEEEEEEEEE
T ss_pred hcCCCeEEEEEEeC
Confidence 8544 788888764
No 82
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=99.13 E-value=2.3e-10 Score=88.82 Aligned_cols=80 Identities=16% Similarity=0.205 Sum_probs=67.1
Q ss_pred CCceEEEeecCCCCCCCeEEcC--Cc-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhcc-CcEEEE
Q psy6995 247 SPAQELTLKRNGLGQLGFHVQP--DG-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTS-SLVTVT 319 (342)
Q Consensus 247 cet~El~LrR~~~gqLGFhV~~--EG-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts-~~V~v~ 319 (342)
.++.++.|.+....+|||.+.. .| +|.+|.++|+|++|| |++||+| |||++|..++|++++.+++.. ..|.|+
T Consensus 7 ~~~~~v~l~~~~~~glG~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~~~~~~v~l~ 86 (96)
T 2qkv_A 7 LEKFNVDLMKKAGKELGLSLSPNEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVSYALFKGANGKVSME 86 (96)
T ss_dssp CCCEEEEEECBTTBCCCEEEEECSSSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEE
T ss_pred CceEEEEEEeCCCCCccEEEEeCCCcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCcEEEE
Confidence 3567777877655789998853 34 899999999999999 9999999 999999999999999999864 479999
Q ss_pred EeCCCCC
Q psy6995 320 VIPALSD 326 (342)
Q Consensus 320 VipP~~d 326 (342)
|..|.++
T Consensus 87 v~R~~p~ 93 (96)
T 2qkv_A 87 VTRPKPA 93 (96)
T ss_dssp EECCCC-
T ss_pred EEeCCcc
Confidence 9887554
No 83
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=99.13 E-value=3.2e-10 Score=85.04 Aligned_cols=72 Identities=25% Similarity=0.317 Sum_probs=60.6
Q ss_pred eEEEeecCCCCCCCeEEcCC-----c-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhcc-CcEEEEE
Q psy6995 250 QELTLKRNGLGQLGFHVQPD-----G-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTS-SLVTVTV 320 (342)
Q Consensus 250 ~El~LrR~~~gqLGFhV~~E-----G-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts-~~V~v~V 320 (342)
..++|+ +.+.|||.+... | +|.+|.++++|++|||++||+| |||++|.+.+|++++.+++.. ..|.|+|
T Consensus 3 ~~v~l~--~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v 80 (85)
T 1rgw_A 3 YSVTLT--GPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLSLTL 80 (85)
T ss_dssp EEEEEC--CSSCCCEEECCCGGGTSCCBEEEECTTSHHHHSSCCCCSBEEEETTEECTTCCHHHHHHHHTTCSSCEEEEE
T ss_pred EEEEEe--CCCccCEEEEeccCCCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHHcCCCeEEEEE
Confidence 456664 346899999642 4 8999999999999999999999 999999999999999999854 4688888
Q ss_pred eCC
Q psy6995 321 IPA 323 (342)
Q Consensus 321 ipP 323 (342)
...
T Consensus 81 ~R~ 83 (85)
T 1rgw_A 81 QKS 83 (85)
T ss_dssp ESC
T ss_pred EeC
Confidence 653
No 84
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=99.12 E-value=2.3e-10 Score=91.33 Aligned_cols=76 Identities=18% Similarity=0.320 Sum_probs=65.3
Q ss_pred CCceEEEeecCCCCCCCeEEcCC-----c-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhcc-CcE
Q psy6995 247 SPAQELTLKRNGLGQLGFHVQPD-----G-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTS-SLV 316 (342)
Q Consensus 247 cet~El~LrR~~~gqLGFhV~~E-----G-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts-~~V 316 (342)
.+.+++.|.|.. .+|||.+... | +|.+|.++++|++|| |++||+| |||++|...+|++++.+++.. ..|
T Consensus 23 ~~~~~v~l~~~~-~glG~~l~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g~~v 101 (112)
T 2r4h_A 23 MDFYTVELERGA-KGFGFSLRGGREYNMDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHSRAIELIKNGGRRV 101 (112)
T ss_dssp CCEEEEEEECBT-TBTSEEEEECGGGTCCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEE
T ss_pred CceEEEEEEcCC-CccCEEEeccccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 457888898876 5699999643 4 899999999999999 9999999 999999999999999999854 468
Q ss_pred EEEEeCC
Q psy6995 317 TVTVIPA 323 (342)
Q Consensus 317 ~v~VipP 323 (342)
+|+|...
T Consensus 102 ~l~v~R~ 108 (112)
T 2r4h_A 102 RLFLKRG 108 (112)
T ss_dssp EEEEECC
T ss_pred EEEEEeC
Confidence 8888653
No 85
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.12 E-value=1.4e-10 Score=93.84 Aligned_cols=77 Identities=23% Similarity=0.321 Sum_probs=67.8
Q ss_pred CCceEEEeecCCCCCCCeEEcCC--------c--eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhcc
Q psy6995 247 SPAQELTLKRNGLGQLGFHVQPD--------G--LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTS 313 (342)
Q Consensus 247 cet~El~LrR~~~gqLGFhV~~E--------G--~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts 313 (342)
+++++++|.|.....|||.+... . +|.+|.++++|++|| |++||+| |||++|.+++|++++++|+..
T Consensus 14 ~~~~~v~l~k~~~~glG~~l~~~~~~~~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 93 (122)
T 1v5q_A 14 TETTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDS 93 (122)
T ss_dssp EEEEEEEECCCSSSSSCEEEECCSCCSSSCSSCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHHHHHH
T ss_pred ceeEEEEEEeCCCCccCEEEecccccCCcCCCCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 47888899998779999999742 1 899999999999999 9999999 999999999999999999864
Q ss_pred ---CcEEEEEeCC
Q psy6995 314 ---SLVTVTVIPA 323 (342)
Q Consensus 314 ---~~V~v~VipP 323 (342)
..|+|+|...
T Consensus 94 ~~g~~v~l~v~R~ 106 (122)
T 1v5q_A 94 SITSKVTLEIEFD 106 (122)
T ss_dssp TTTTCEEEEEEEE
T ss_pred CCCCeEEEEEEEC
Confidence 3788888754
No 86
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=99.12 E-value=8.4e-11 Score=96.37 Aligned_cols=76 Identities=20% Similarity=0.434 Sum_probs=64.4
Q ss_pred ceEEEeecCCCCCCCeEEcCC---------c-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhcc--
Q psy6995 249 AQELTLKRNGLGQLGFHVQPD---------G-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTS-- 313 (342)
Q Consensus 249 t~El~LrR~~~gqLGFhV~~E---------G-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts-- 313 (342)
+.++.|.+.+...|||.+... | +|..|.++|+|++|| |++||+| |||++|..++|++++++|+.+
T Consensus 26 ~~~v~l~k~~~~glG~~i~~~~~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~ 105 (127)
T 1wg6_A 26 TLEIPLNDSGSAGLGVSLKGNKSRETGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLRRSMS 105 (127)
T ss_dssp EEEEECSSSTTTCCCCEEEEEEETTTTEEEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHHHHHHH
T ss_pred EEEEEEeeCCCCccCeEEecccCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhc
Confidence 344556656678999999642 3 899999999999999 9999999 999999999999999999964
Q ss_pred ------CcEEEEEeCCC
Q psy6995 314 ------SLVTVTVIPAL 324 (342)
Q Consensus 314 ------~~V~v~VipP~ 324 (342)
..|+|+|....
T Consensus 106 ~~g~~~~~v~l~v~R~~ 122 (127)
T 1wg6_A 106 MEGNIRGMIQLVILRRS 122 (127)
T ss_dssp HHHHHTCEEEEEEEECS
T ss_pred cccCCCCEEEEEEEeCC
Confidence 57999988643
No 87
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=99.11 E-value=3.4e-10 Score=89.15 Aligned_cols=80 Identities=28% Similarity=0.405 Sum_probs=65.2
Q ss_pred CceEEEeecCCCCCCCeEEcCC--------c-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhcc--
Q psy6995 248 PAQELTLKRNGLGQLGFHVQPD--------G-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTS-- 313 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~E--------G-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts-- 313 (342)
+...+.+.+.. ..|||.+... | +|.+|.++++|++|| |++||+| |||++|...+|++++++|+..
T Consensus 11 ~~~~~~l~~~~-~glG~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 89 (111)
T 2koj_A 11 KRLNIQLKKGT-EGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLRSTKM 89 (111)
T ss_dssp EEEEEEEECBT-TBTCEEEEECSCSSSSSSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHHHHCCC
T ss_pred cEEEEEEEECC-CccCEEEEeccCCCCCCcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 34555666654 6899999643 2 899999999999999 9999999 999999999999999999863
Q ss_pred -CcEEEEEeCCCCCCC
Q psy6995 314 -SLVTVTVIPALSDGT 328 (342)
Q Consensus 314 -~~V~v~VipP~~dg~ 328 (342)
..|.|+|......-.
T Consensus 90 g~~v~l~v~R~~~~~~ 105 (111)
T 2koj_A 90 EGTVSLLVFRQEEAFH 105 (111)
T ss_dssp SSEEEEEEEECCCCCC
T ss_pred CCeEEEEEEeCCCCcc
Confidence 478999877544333
No 88
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.11 E-value=1.8e-10 Score=93.40 Aligned_cols=78 Identities=19% Similarity=0.348 Sum_probs=67.6
Q ss_pred CCceEEEeecCCCCCCCeEEcC----------Cc-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhc
Q psy6995 247 SPAQELTLKRNGLGQLGFHVQP----------DG-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKT 312 (342)
Q Consensus 247 cet~El~LrR~~~gqLGFhV~~----------EG-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrt 312 (342)
.+..++.|.|.+...|||.+.. .| +|..|.++++|++|| |++||+| |||++|..++|++++++|+.
T Consensus 14 ~~~~~v~l~~~~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~ 93 (129)
T 2dmz_A 14 FETYNVELVRKDGQSLGIRIVGYVGTSHTGEASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEVLRN 93 (129)
T ss_dssp EEEEEEEECCCTTCCCCEEEEEECCCSSSCCCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHHHHHHHHH
T ss_pred CcEEEEEEEeCCCCCcCEEEEeecCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 3567888878777899999964 34 799999999999999 9999999 99999999999999999986
Q ss_pred -cCcEEEEEeCCC
Q psy6995 313 -SSLVTVTVIPAL 324 (342)
Q Consensus 313 -s~~V~v~VipP~ 324 (342)
...|.|+|....
T Consensus 94 ~~~~v~l~v~R~~ 106 (129)
T 2dmz_A 94 AGQVVHLTLVRRK 106 (129)
T ss_dssp CCSSEEEEEEEES
T ss_pred CCCeEEEEEEeCC
Confidence 447899887654
No 89
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=99.11 E-value=4.1e-10 Score=86.35 Aligned_cols=75 Identities=27% Similarity=0.452 Sum_probs=63.4
Q ss_pred CceEEEeecCCCCCCCeEEcC-----------Cc-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhc-
Q psy6995 248 PAQELTLKRNGLGQLGFHVQP-----------DG-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKT- 312 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~-----------EG-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrt- 312 (342)
+...+.+.+. .+.|||.+.. .| +|+.|.++++|++|||++||+| |||++|.+.+|.+++..++.
T Consensus 3 ~~~~v~~~~~-~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~ 81 (97)
T 2w4f_A 3 EELTLTILRQ-TGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAVEALRGA 81 (97)
T ss_dssp CEEEEEEECB-TTBSSEEEEECTTSCCSBTTBCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTS
T ss_pred eEEEEEEEeC-CCceeEEEECCccCCcccCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHhCC
Confidence 3456677777 5899999962 34 7999999999999999999999 99999999999999988874
Q ss_pred cCcEEEEEeCC
Q psy6995 313 SSLVTVTVIPA 323 (342)
Q Consensus 313 s~~V~v~VipP 323 (342)
...|.|+|...
T Consensus 82 g~~v~l~v~R~ 92 (97)
T 2w4f_A 82 GTAVQMRVWRE 92 (97)
T ss_dssp CSEEEEEEECC
T ss_pred CCeEEEEEEeC
Confidence 44788888764
No 90
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.11 E-value=6.6e-11 Score=95.71 Aligned_cols=87 Identities=21% Similarity=0.257 Sum_probs=71.2
Q ss_pred ceEEEeecCCCCCCCeEEcCC-c-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhccC--cEEEEEeC
Q psy6995 249 AQELTLKRNGLGQLGFHVQPD-G-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTSS--LVTVTVIP 322 (342)
Q Consensus 249 t~El~LrR~~~gqLGFhV~~E-G-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts~--~V~v~Vip 322 (342)
.+.+.|.|. .++|||.+..+ + +|..|.++++|++|||++||+| |||++|..++|++++++|+... .|.|+|++
T Consensus 16 ~r~v~l~~~-~~~~G~~l~~~~~v~V~~V~~~spA~~aGL~~GD~Il~InG~~v~~~~~~d~~~~i~~~~~~~v~l~V~~ 94 (111)
T 1vae_A 16 PRGIHFTVE-EGDLGFTLRGNTPVQVHFLDPHCSASLAGAKEGDYIVSIQGVDCKWLTVSEVMKLLKSFGGEEVEMKVVS 94 (111)
T ss_dssp CCCCCEECC-SSCCSCCEESSSSCEECCCCTTSSHHHHHCCTTCEEEEETTEECSSCCHHHHHHHHHHTTTSEECEEEEC
T ss_pred CeEEEEEcC-CCcccEEEeCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCceEEEEEEe
Confidence 455667774 48999999755 3 5899999999999999999999 9999999999999999998544 49999998
Q ss_pred CCCCCC-CCcCCCcc
Q psy6995 323 ALSDGT-PRRYADLK 336 (342)
Q Consensus 323 P~~dg~-PRRgc~~~ 336 (342)
+.+... |++-+.+|
T Consensus 95 ~~~~~~~~~~~~~~~ 109 (111)
T 1vae_A 95 LLDSTSSMHNKSGPS 109 (111)
T ss_dssp EECCCCCCCCCCCCC
T ss_pred cCCCccccCCCCCCC
Confidence 887774 44445544
No 91
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=99.10 E-value=2.8e-10 Score=89.28 Aligned_cols=77 Identities=18% Similarity=0.304 Sum_probs=65.3
Q ss_pred CCceEEEeec-CCCCCCCeEEcC----------Cc-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHh
Q psy6995 247 SPAQELTLKR-NGLGQLGFHVQP----------DG-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLK 311 (342)
Q Consensus 247 cet~El~LrR-~~~gqLGFhV~~----------EG-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLr 311 (342)
.++.++.|.| .....|||.+.. .| +|.+|.++++|++|| |++||+| |||++|.+++|++++.+|+
T Consensus 11 ~~~~~v~l~r~~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~ 90 (108)
T 2jre_A 11 FSLYSVELFREKDTSSLGISISGMRDQSTTGEATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSDVVEVLR 90 (108)
T ss_dssp CEEEEEEEECCSTTSCCSEEEECCCCCSCSSCCCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHHHHHHHH
T ss_pred cEEEEEEEEecCCCCCcCEEEEcccCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 3567788876 455899999953 25 799999999999999 9999999 9999999999999999998
Q ss_pred c-cCcEEEEEeCC
Q psy6995 312 T-SSLVTVTVIPA 323 (342)
Q Consensus 312 t-s~~V~v~VipP 323 (342)
. ...|.|+|...
T Consensus 91 ~~g~~v~l~v~R~ 103 (108)
T 2jre_A 91 NAGNPVRLLLIRR 103 (108)
T ss_dssp HHCSEEEEEEEEC
T ss_pred cCCCeEEEEEEeC
Confidence 5 44788888754
No 92
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=99.10 E-value=2.1e-10 Score=99.31 Aligned_cols=77 Identities=25% Similarity=0.410 Sum_probs=68.6
Q ss_pred CCceEEEeecCCCCCCCeEEcCC-----c-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhccCcEEE
Q psy6995 247 SPAQELTLKRNGLGQLGFHVQPD-----G-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTSSLVTV 318 (342)
Q Consensus 247 cet~El~LrR~~~gqLGFhV~~E-----G-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts~~V~v 318 (342)
.+.+++.|.|.+.++|||.+... | +|..|.++|+|++|||++||+| |||++|.+++|++++.+|+....|.|
T Consensus 83 ~~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~V~~V~~gspA~~aGL~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~v~l 162 (192)
T 3k1r_A 83 RKLKEVRLDRLHPEGLGLSVRGGLEFGCGLFISHLIKGGQADSVGLQVGDEIVRINGYSISSCTHEEVINLIRTEKTVSI 162 (192)
T ss_dssp SSCEEEEEETTSTTCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHTSSSEEEE
T ss_pred CceEEEEEEeCCCCceeEEEEcccccCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHcCCCeEEE
Confidence 45788999999778999999532 4 8999999999999999999999 99999999999999999998668888
Q ss_pred EEeCC
Q psy6995 319 TVIPA 323 (342)
Q Consensus 319 ~VipP 323 (342)
+|...
T Consensus 163 ~v~r~ 167 (192)
T 3k1r_A 163 KVRHI 167 (192)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 88763
No 93
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.10 E-value=5.1e-10 Score=88.25 Aligned_cols=75 Identities=20% Similarity=0.248 Sum_probs=64.8
Q ss_pred CceEEEeecCCCCCCCeEEcC--------Cc-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhccC-
Q psy6995 248 PAQELTLKRNGLGQLGFHVQP--------DG-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTSS- 314 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~--------EG-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts~- 314 (342)
+..+++|.|.. ..|||.+.. .| +|..|.++++|++|| |++||+| |||++|..++|++++.+++...
T Consensus 8 ~~~~v~l~~~~-~glG~~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~ 86 (110)
T 1um1_A 8 YVFTVELERGP-SGLGMGLIDGMHTHLGAPGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIRHGGK 86 (110)
T ss_dssp CEEEEEEECCT-TCCCEEEEETTTSTTCCSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHHTCCS
T ss_pred cEEEEEEEECC-CccCEEEeCCcCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 56778888865 689999943 35 699999999999999 9999999 9999999999999999998654
Q ss_pred cEEEEEeCC
Q psy6995 315 LVTVTVIPA 323 (342)
Q Consensus 315 ~V~v~VipP 323 (342)
.|.|+|...
T Consensus 87 ~v~l~v~R~ 95 (110)
T 1um1_A 87 KMRFLVAKS 95 (110)
T ss_dssp EEEEEEECC
T ss_pred eEEEEEEeC
Confidence 788888764
No 94
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.10 E-value=2.9e-10 Score=91.32 Aligned_cols=75 Identities=28% Similarity=0.509 Sum_probs=65.0
Q ss_pred CceEEEeecCCCCCCCeEEcC---------C-c-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhcc
Q psy6995 248 PAQELTLKRNGLGQLGFHVQP---------D-G-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTS 313 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~---------E-G-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts 313 (342)
+.++++|.|.. ..|||.+.. + | +|++|.++++|++|| |++||+| |||++|.+++|++++.+|+..
T Consensus 17 ~~~~v~l~r~~-~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~ 95 (120)
T 2eno_A 17 TEEEINLTRGP-SGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNA 95 (120)
T ss_dssp EEEEEEEECCS-SSCSEEEECCTTTCSSSSCCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHHHHHHHHHH
T ss_pred ceEEEEEEECC-CCCCEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 46778899977 899999975 2 3 899999999999999 9999999 999999999999999999854
Q ss_pred -CcEEEEEeCC
Q psy6995 314 -SLVTVTVIPA 323 (342)
Q Consensus 314 -~~V~v~VipP 323 (342)
..|.|+|...
T Consensus 96 g~~v~l~v~R~ 106 (120)
T 2eno_A 96 GYAVSLRVQHR 106 (120)
T ss_dssp CSEEEEEEEEE
T ss_pred CCeEEEEEEeC
Confidence 4688877543
No 95
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=99.09 E-value=4.1e-10 Score=88.26 Aligned_cols=76 Identities=25% Similarity=0.336 Sum_probs=63.6
Q ss_pred CCceEEEeecCCCCCCCeEEcC--------Cc-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhccC
Q psy6995 247 SPAQELTLKRNGLGQLGFHVQP--------DG-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTSS 314 (342)
Q Consensus 247 cet~El~LrR~~~gqLGFhV~~--------EG-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts~ 314 (342)
.++.+++| + +...|||.+.. .| +|++|.++|+|++|| |++||+| |||++|..++|++++.+++...
T Consensus 10 ~~~~~v~l-~-~~~glG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~~~g 87 (106)
T 3axa_A 10 PEIITVTL-K-KQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTS 87 (106)
T ss_dssp CCEEEEEE-E-CSSSCSEEEEEEECSSCSSEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCC
T ss_pred ceEEEEEE-C-CCCccCEEEEeecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 35666777 4 34789999942 24 799999999999999 9999999 9999999999999999998644
Q ss_pred -cEEEEEeCCC
Q psy6995 315 -LVTVTVIPAL 324 (342)
Q Consensus 315 -~V~v~VipP~ 324 (342)
.|.|+|....
T Consensus 88 ~~v~l~v~R~~ 98 (106)
T 3axa_A 88 SVVTLEVAKQG 98 (106)
T ss_dssp SEEEEEEECCC
T ss_pred CeEEEEEEeCC
Confidence 7899988653
No 96
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=99.09 E-value=5.2e-10 Score=91.56 Aligned_cols=81 Identities=22% Similarity=0.316 Sum_probs=67.4
Q ss_pred CCCCCceEEEeecCCCCCCCeEEcC--------------Cc-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHH
Q psy6995 244 TPGSPAQELTLKRNGLGQLGFHVQP--------------DG-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQ 305 (342)
Q Consensus 244 T~Gcet~El~LrR~~~gqLGFhV~~--------------EG-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq 305 (342)
|.-..++++++.|...+.|||.+.+ .| +|+.|.++|+|++|| |++||+| |||++|.++++++
T Consensus 20 s~~~~p~~v~l~k~~~~~lGi~v~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~ 99 (123)
T 2iwq_A 20 FQSMQPRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQ 99 (123)
T ss_dssp ---CCCEEEEECCCTTSCCSEEEEECC---------CCCCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHH
T ss_pred cccCCCEEEEEEecCCCCccEEEEeccCccccccccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHH
Confidence 4445678999999877899999842 24 899999999999999 9999999 9999999999999
Q ss_pred HHHHHhccC-cEEEEEeCCC
Q psy6995 306 MVDLLKTSS-LVTVTVIPAL 324 (342)
Q Consensus 306 ~vdlLrts~-~V~v~VipP~ 324 (342)
++++|+... .|.|+|....
T Consensus 100 ~~~~l~~~~~~v~l~v~r~~ 119 (123)
T 2iwq_A 100 AVEAIRKAGNPVVFMVQSII 119 (123)
T ss_dssp HHHHHHHCCSSEEEEEECCC
T ss_pred HHHHHHcCCCeEEEEEEECC
Confidence 999998544 7888887643
No 97
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.09 E-value=3.9e-10 Score=91.23 Aligned_cols=88 Identities=19% Similarity=0.291 Sum_probs=72.4
Q ss_pred HHHHHHhhhccCCCCCceEEEeecCCCCCCCeEEcCC------c-eEEEEcccchhhhhC-CCCCCEE--eecccccCCC
Q psy6995 233 LMEVVVRLRAATPGSPAQELTLKRNGLGQLGFHVQPD------G-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLS 302 (342)
Q Consensus 233 l~EIV~RL~~VT~Gcet~El~LrR~~~gqLGFhV~~E------G-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~ls 302 (342)
-..+-+|+.... .+.+++.|.|.. ..|||.+... | +|++|.++|+|++|| |++||+| |||++|..++
T Consensus 12 ~~~~~~~~~~~~--~~~~~v~l~k~~-~glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~ 88 (124)
T 2daz_A 12 DQKIRQRYADLP--GELHIIELEKDK-NGLGLSLAGNKDRSRMSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRS 88 (124)
T ss_dssp HHHHHHHSTTSS--SEEEEEEEECCS-SCCCEEEECBSSTTSCCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSC
T ss_pred hhhHHHhhccCC--CceEEEEEEeCC-CccCEEEeccCCCCcCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCC
Confidence 345566665553 467888898874 6899999642 4 799999999999999 9999999 9999999999
Q ss_pred HHHHHHHHhccC-cEEEEEeCC
Q psy6995 303 HDQMVDLLKTSS-LVTVTVIPA 323 (342)
Q Consensus 303 Heq~vdlLrts~-~V~v~VipP 323 (342)
|++++.+|+... .|.|+|...
T Consensus 89 ~~~~~~~~~~~~~~v~l~v~R~ 110 (124)
T 2daz_A 89 HQNASAIIKTAPSKVKLVFIRN 110 (124)
T ss_dssp HHHHHHHHHHSCSEEEEEEEEC
T ss_pred HHHHHHHHHcCCCeEEEEEEeC
Confidence 999999998654 788888764
No 98
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.09 E-value=2.3e-10 Score=88.14 Aligned_cols=77 Identities=21% Similarity=0.310 Sum_probs=63.9
Q ss_pred CCCCceEEEeecCCCCCCCeEEcC-----Cc-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhcc-Cc
Q psy6995 245 PGSPAQELTLKRNGLGQLGFHVQP-----DG-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTS-SL 315 (342)
Q Consensus 245 ~Gcet~El~LrR~~~gqLGFhV~~-----EG-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts-~~ 315 (342)
.|..+..+.+ .+...|||.+.. .| +|++|.++++|++|||++||+| |||++|.+++|++++++|+.. ..
T Consensus 3 sg~~~~~~~~--~~~~~lG~~l~~g~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 80 (94)
T 1vb7_A 3 SGSSGLTVDV--AGPAPWGFRISGGRDFHTPIIVTKVTERGKAEAADLRPGDIIVAINGQSAENMLHAEAQSKIRQSASP 80 (94)
T ss_dssp CCCCCEEEEE--CSSSCCSBCCEEETTTTEEEECCCBCTTSSHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSS
T ss_pred CccEEEEEEe--cCCCCccEEEecccCCCCCeEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCc
Confidence 4555555555 455789999964 24 8899999999999999999999 999999999999999999865 57
Q ss_pred EEEEEeCC
Q psy6995 316 VTVTVIPA 323 (342)
Q Consensus 316 V~v~VipP 323 (342)
|+|+|...
T Consensus 81 v~l~v~R~ 88 (94)
T 1vb7_A 81 LRLQLDRS 88 (94)
T ss_dssp EEEEEECC
T ss_pred EEEEEEEC
Confidence 88888764
No 99
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=99.09 E-value=3.8e-10 Score=87.48 Aligned_cols=75 Identities=24% Similarity=0.374 Sum_probs=64.6
Q ss_pred CCceEEEeecCCCCCCCeEEcCC----c-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhccC-cEE
Q psy6995 247 SPAQELTLKRNGLGQLGFHVQPD----G-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTSS-LVT 317 (342)
Q Consensus 247 cet~El~LrR~~~gqLGFhV~~E----G-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts~-~V~ 317 (342)
.+.++++|.|.+ .+|||.+... | +|..|.++++|++|| |++||+| |||++|...+|++++.+++... .|.
T Consensus 10 ~~~~~v~l~k~~-~glG~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~ 88 (104)
T 3i4w_A 10 REPRRIVIHRGS-TGLGFNIVGGEXGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT 88 (104)
T ss_dssp SSCEEEEEECBT-TBTSEEEEECC-CCCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHHHTSCSEEE
T ss_pred CccEEEEEEeCC-CccCEEEECCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 467889999985 5799999642 4 799999999999999 9999999 9999999999999999998644 677
Q ss_pred EEEeC
Q psy6995 318 VTVIP 322 (342)
Q Consensus 318 v~Vip 322 (342)
++|..
T Consensus 89 l~v~r 93 (104)
T 3i4w_A 89 IIAQY 93 (104)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77754
No 100
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.09 E-value=3e-10 Score=87.50 Aligned_cols=75 Identities=17% Similarity=0.181 Sum_probs=62.7
Q ss_pred CceEEEeecCCCCCCCeEEcC-----Cc-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhccC-cEEE
Q psy6995 248 PAQELTLKRNGLGQLGFHVQP-----DG-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTSS-LVTV 318 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~-----EG-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts~-~V~v 318 (342)
.++.++|+++ ..|||.+.. .+ +|..|.++++|++|||++||+| |||++|.+++|++++.+++... .|.|
T Consensus 8 ~~~~v~l~~~--~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l 85 (94)
T 2eeg_A 8 MPHSVTLRGP--SPWGFRLVGGRDFSAPLTISRVHAGSKAALAALCPGDLIQAINGESTELMTHLEAQNRIKGCHDHLTL 85 (94)
T ss_dssp CCEEEEECCS--SCCSCCEECCTTTTSCCEECCCCSSSHHHHTTCCTTCEEEEETTEETTTCCHHHHHHHHHTCCSCEEE
T ss_pred ceEEEEEeCC--CccCEEEECccCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 4566777444 589999964 23 8999999999999999999999 9999999999999999998644 6888
Q ss_pred EEeCCC
Q psy6995 319 TVIPAL 324 (342)
Q Consensus 319 ~VipP~ 324 (342)
+|....
T Consensus 86 ~v~R~g 91 (94)
T 2eeg_A 86 SVSSGP 91 (94)
T ss_dssp EEECCS
T ss_pred EEEeCC
Confidence 887654
No 101
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.09 E-value=4.5e-10 Score=88.69 Aligned_cols=78 Identities=26% Similarity=0.412 Sum_probs=66.4
Q ss_pred CCCceEEEeecCCCCCCCeEEcCC---c-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhcc-CcEE
Q psy6995 246 GSPAQELTLKRNGLGQLGFHVQPD---G-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTS-SLVT 317 (342)
Q Consensus 246 Gcet~El~LrR~~~gqLGFhV~~E---G-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts-~~V~ 317 (342)
..+.+++.|.|.+ ..|||.+... | +|..|.++++|++|| |++||+| |||++|..++|++++.+|+.. ..|.
T Consensus 13 ~~~~~~v~l~~~~-~~lG~~l~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v~ 91 (111)
T 2dlu_A 13 WGHVEEVELINDG-SGLGFGIVGGKTSGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNCGNSVR 91 (111)
T ss_dssp CSEEEEEEEECCS-SCCCEEEECCSSSSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHHHHHCSEEE
T ss_pred cCceEEEEEEeCC-CccCEEEeccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEE
Confidence 3456888898876 5799999643 3 899999999999999 9999999 999999999999999999854 4788
Q ss_pred EEEeCCC
Q psy6995 318 VTVIPAL 324 (342)
Q Consensus 318 v~VipP~ 324 (342)
|+|....
T Consensus 92 l~v~R~~ 98 (111)
T 2dlu_A 92 MLVARDP 98 (111)
T ss_dssp EEEEESC
T ss_pred EEEEeCC
Confidence 8887543
No 102
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=99.08 E-value=2e-10 Score=90.93 Aligned_cols=76 Identities=16% Similarity=0.229 Sum_probs=65.5
Q ss_pred CceEEEeecCCCCCCCeEEcC-----------Cc-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhc
Q psy6995 248 PAQELTLKRNGLGQLGFHVQP-----------DG-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKT 312 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~-----------EG-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrt 312 (342)
+..++.|.|.. ..|||.+.. .| +|.+|.++|+|++|| |++||+| |||++|..++|++++.+++.
T Consensus 4 ~~~~v~l~k~~-~glG~~l~~~~~~~~~~~~~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~ 82 (113)
T 2g5m_B 4 ELFPVELEKDS-EGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRN 82 (113)
T ss_dssp EEEEEECCCCS-SCCCCEEEEEECCCCSSSCCEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHHHHHHHHH
T ss_pred EEEEEEEEeCC-CCCCEEEEecCCCCcCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc
Confidence 56778888865 789999976 13 899999999999999 9999999 99999999999999999985
Q ss_pred c-CcEEEEEeCCC
Q psy6995 313 S-SLVTVTVIPAL 324 (342)
Q Consensus 313 s-~~V~v~VipP~ 324 (342)
. ..|+|+|....
T Consensus 83 ~g~~v~l~v~R~~ 95 (113)
T 2g5m_B 83 TKGRVRFMIGRER 95 (113)
T ss_dssp SCSSCEEEEEECC
T ss_pred CCCeEEEEEEeCC
Confidence 4 47889887654
No 103
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=99.08 E-value=6.8e-10 Score=85.66 Aligned_cols=66 Identities=21% Similarity=0.395 Sum_probs=58.1
Q ss_pred CceEEEeecCCCCCCCeEEcCC----c-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhccC
Q psy6995 248 PAQELTLKRNGLGQLGFHVQPD----G-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTSS 314 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~E----G-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts~ 314 (342)
.++.+.+.|.. .+|||.+..+ | +|+.|.++++|++|||++||+| |||++|.+++|+++.++|+...
T Consensus 9 ~~~~~~l~~~~-~g~G~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 81 (98)
T 2jxo_A 9 RPRLCTMKKGP-SGYGFNLHSDKSKPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGG 81 (98)
T ss_dssp CCEEEEEECTT-TCCCEEEECCCSSSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTTT
T ss_pred CcEEEEEEeCC-CcccEEEEecCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 46777888875 5799999654 3 8999999999999999999999 9999999999999999998654
No 104
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.07 E-value=6e-10 Score=90.26 Aligned_cols=76 Identities=25% Similarity=0.316 Sum_probs=65.2
Q ss_pred CCceEEEeecCCCCCCCeEEcC-----Cc-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhcc---C
Q psy6995 247 SPAQELTLKRNGLGQLGFHVQP-----DG-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTS---S 314 (342)
Q Consensus 247 cet~El~LrR~~~gqLGFhV~~-----EG-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts---~ 314 (342)
.+..++.|.|.. .+|||.+.. .| +|..|.++++|++|| |++||+| |||+.|..++|++++++|+.. .
T Consensus 18 ~~~~~v~l~~~~-~glG~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~ 96 (123)
T 1ueq_A 18 GTFLSTTLKKSN-MGFGFTIIGGDEPDEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQSVPIGQ 96 (123)
T ss_dssp SEEEEEEEECCT-TSCSEEEECCSSSSCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTC
T ss_pred CcEEEEEEEeCC-CceeEEEecccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCC
Confidence 467788898874 579999973 13 899999999999999 9999999 999999999999999999873 3
Q ss_pred cEEEEEeCC
Q psy6995 315 LVTVTVIPA 323 (342)
Q Consensus 315 ~V~v~VipP 323 (342)
.|+|+|...
T Consensus 97 ~v~l~v~R~ 105 (123)
T 1ueq_A 97 SVNLVLCRG 105 (123)
T ss_dssp EEEEEEEES
T ss_pred eEEEEEEeC
Confidence 688888643
No 105
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.07 E-value=2.3e-10 Score=93.93 Aligned_cols=75 Identities=17% Similarity=0.255 Sum_probs=64.6
Q ss_pred CceEEEeecCCCCCCCeEEcC-------C-c-eEEEEcccchhhhh-CCCCCCEE--eecccccCCCHHHHHHHHhccC-
Q psy6995 248 PAQELTLKRNGLGQLGFHVQP-------D-G-LVTEVEHMGLAYQE-GLKQGCRL--ICKVAVSTLSHDQMVDLLKTSS- 314 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~-------E-G-~Vt~VE~~g~Ae~A-GLR~G~RL--Icg~sV~~lsHeq~vdlLrts~- 314 (342)
+.+++.|.|.. ++|||.+.. + + +|..|.++++|++| ||++||+| |||++|..++|++++++|+.+.
T Consensus 29 ~~~~v~l~k~~-~glG~~i~gg~~~~~~~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~ 107 (130)
T 1i16_A 29 TVCTVTLEKMS-AGLGFSLEGGKGSLHGDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKALPD 107 (130)
T ss_dssp EEEEEEEETTS-SSTTEEEECCCCCSSSCCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHHHTSCS
T ss_pred cEEEEEEEcCC-CccCEEEecCcCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 56778888864 689999964 1 2 79999999999999 99999999 9999999999999999999764
Q ss_pred -cEEEEEeCC
Q psy6995 315 -LVTVTVIPA 323 (342)
Q Consensus 315 -~V~v~VipP 323 (342)
.|.|+|..+
T Consensus 108 ~~v~l~v~r~ 117 (130)
T 1i16_A 108 GPVTIVIRRK 117 (130)
T ss_dssp SEEEEEEEEE
T ss_pred ceEEEEEEeC
Confidence 488888765
No 106
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=99.07 E-value=3.9e-10 Score=91.52 Aligned_cols=76 Identities=17% Similarity=0.288 Sum_probs=67.1
Q ss_pred CceEEEeecCCCCCCCeEEcCC--c--eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhccC---cEE
Q psy6995 248 PAQELTLKRNGLGQLGFHVQPD--G--LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTSS---LVT 317 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~E--G--~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts~---~V~ 317 (342)
+++++.|.... ..|||.+.++ | ||..+.++|+|++.| |++||+| |||++|..++|+|++++|+... .++
T Consensus 5 ~~k~V~l~K~~-~~LG~tI~~~g~g~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~~g~~~~ 83 (95)
T 3gge_A 5 IEKEVNVYKSE-DSLGLTITDNGVGYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKELKKEELFT 83 (95)
T ss_dssp EEEEEEEECCS-SCCCEEEECSSSSCCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHHHSCTTCEEE
T ss_pred eEEEEEEEECC-CCceEEEEcCCCCcEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhCCCCCEEE
Confidence 46788888866 8999999854 3 899999999999987 8999999 9999999999999999999644 589
Q ss_pred EEEeCCC
Q psy6995 318 VTVIPAL 324 (342)
Q Consensus 318 v~VipP~ 324 (342)
|.++.|.
T Consensus 84 L~lv~p~ 90 (95)
T 3gge_A 84 MKLIEPK 90 (95)
T ss_dssp EEEEEEC
T ss_pred EEEECcc
Confidence 9999884
No 107
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.07 E-value=7.9e-10 Score=87.16 Aligned_cols=75 Identities=27% Similarity=0.456 Sum_probs=63.5
Q ss_pred CceEEEeecCCCCCCCeEEc-----------CCc-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhc-
Q psy6995 248 PAQELTLKRNGLGQLGFHVQ-----------PDG-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKT- 312 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~-----------~EG-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrt- 312 (342)
+...+.+.+. .+.|||.+. ..| +|+.|.++++|++|||++||+| |||+.|.+++|.+++.+++.
T Consensus 15 ~~~~~~l~~~-~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~~ 93 (110)
T 1x5q_A 15 EELTLTILRQ-TGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAVEALRGA 93 (110)
T ss_dssp EEEEEEEECS-SSSCSEEEEECTTSCCSSTTCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHSC
T ss_pred ceEEEEEecC-CCeeeEEEEccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHhhCC
Confidence 3455667776 589999996 235 7999999999999999999999 99999999999999999985
Q ss_pred cCcEEEEEeCC
Q psy6995 313 SSLVTVTVIPA 323 (342)
Q Consensus 313 s~~V~v~VipP 323 (342)
...|+|+|...
T Consensus 94 g~~v~l~v~R~ 104 (110)
T 1x5q_A 94 GTAVQMRVWRE 104 (110)
T ss_dssp CSEEEEEEEEC
T ss_pred CCeEEEEEEEC
Confidence 44789988764
No 108
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.06 E-value=2e-09 Score=87.33 Aligned_cols=82 Identities=26% Similarity=0.310 Sum_probs=67.2
Q ss_pred hccCCCCCceEEEeecCCCCCCCeEEcC-----Cc-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhc
Q psy6995 241 RAATPGSPAQELTLKRNGLGQLGFHVQP-----DG-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKT 312 (342)
Q Consensus 241 ~~VT~Gcet~El~LrR~~~gqLGFhV~~-----EG-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrt 312 (342)
++.-.| +.+.+.+.......|||.+.. .| +|..|.++++|++|||++||+| |||++|.+++|++++..++.
T Consensus 14 ~v~R~g-~~~~v~v~~~~~~~lG~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~~~~ 92 (128)
T 1uf1_A 14 HLLQGG-DEKKVNLVLGDGRSLGLTIRGGAEYGLGIYITGVDPGSEAEGSGLKVGDQILEVNGRSFLNILHDEAVRLLKS 92 (128)
T ss_dssp CCCCCS-SEEEEEEECCSSCCCCEEEECCTTTTCCCEEEEECTTCHHHHHTCCTTCEEEEETTEECSSCCHHHHHHHHTT
T ss_pred EEEeCC-cEEEEEEEECCCCccCEEEECcccCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHhc
Confidence 333344 456666665544789999965 14 8999999999999999999999 99999999999999999998
Q ss_pred cCcEEEEEeCC
Q psy6995 313 SSLVTVTVIPA 323 (342)
Q Consensus 313 s~~V~v~VipP 323 (342)
...|.|+|..-
T Consensus 93 ~~~v~l~v~R~ 103 (128)
T 1uf1_A 93 SRHLILTVKDV 103 (128)
T ss_dssp CSEEEEEEECC
T ss_pred CCeEEEEEEEC
Confidence 88899988753
No 109
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=99.05 E-value=6.6e-10 Score=85.55 Aligned_cols=75 Identities=19% Similarity=0.390 Sum_probs=63.8
Q ss_pred ceEEEeecCCCCCCCeEEcC------Cc-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhcc-CcEE
Q psy6995 249 AQELTLKRNGLGQLGFHVQP------DG-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTS-SLVT 317 (342)
Q Consensus 249 t~El~LrR~~~gqLGFhV~~------EG-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts-~~V~ 317 (342)
.+.++|.|.. ..|||.+.. .| +|.+|.++++|++|| |++||+| |||++|.+.+|++++.+++.. ..|.
T Consensus 5 ~~~v~l~~~~-~~lG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~ 83 (98)
T 2opg_A 5 ETTIEISKGR-TGLGLSIVGGSDTLLGAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQTPQRVR 83 (98)
T ss_dssp EEEEEEECBT-TBTCEEEEECTTSTTCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEE
T ss_pred EEEEEEEECC-CcccEEEecCCCCCCCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEE
Confidence 4677888874 679999963 24 799999999999999 9999999 999999999999999999854 4788
Q ss_pred EEEeCCC
Q psy6995 318 VTVIPAL 324 (342)
Q Consensus 318 v~VipP~ 324 (342)
++|....
T Consensus 84 l~v~R~~ 90 (98)
T 2opg_A 84 LTLYRDE 90 (98)
T ss_dssp EEEEECS
T ss_pred EEEEcCC
Confidence 8887643
No 110
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=99.05 E-value=4.5e-10 Score=97.52 Aligned_cols=77 Identities=16% Similarity=0.223 Sum_probs=66.8
Q ss_pred CCCCCceEEEeecCCCCCCCeEEcC-----------Cc-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHH
Q psy6995 244 TPGSPAQELTLKRNGLGQLGFHVQP-----------DG-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVD 308 (342)
Q Consensus 244 T~Gcet~El~LrR~~~gqLGFhV~~-----------EG-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vd 308 (342)
....+..+++|.|.. .+|||.+.. .| +|..|.++|+|++|| ||+||+| |||++|..++|++++.
T Consensus 76 ~~~~~~~~v~l~k~~-~glG~~i~g~~~g~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~ 154 (170)
T 3egg_C 76 VERLELFPVELEKDS-EGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAAS 154 (170)
T ss_dssp HTTSEEEEEEEECBT-TBSSEEEEEECSSSSCCSSSBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHHHHH
T ss_pred cCCceEEEEEEEeCC-CeEeEEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 345677888899987 579999976 23 899999999999999 9999999 9999999999999999
Q ss_pred HHhccC-cEEEEEe
Q psy6995 309 LLKTSS-LVTVTVI 321 (342)
Q Consensus 309 lLrts~-~V~v~Vi 321 (342)
+|+.+. .|+|+|.
T Consensus 155 ~l~~~g~~v~L~V~ 168 (170)
T 3egg_C 155 VLRNTKGRVRFMIG 168 (170)
T ss_dssp HHHHCCSEEEEEEE
T ss_pred HHHcCCCEEEEEEE
Confidence 999644 6888775
No 111
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.04 E-value=5.9e-10 Score=93.41 Aligned_cols=77 Identities=29% Similarity=0.462 Sum_probs=66.5
Q ss_pred CCCceEEEeecCCCCCCCeEEcCC----------c-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHh
Q psy6995 246 GSPAQELTLKRNGLGQLGFHVQPD----------G-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLK 311 (342)
Q Consensus 246 Gcet~El~LrR~~~gqLGFhV~~E----------G-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLr 311 (342)
-.+.++++|.|++ .+|||.+... | +|++|.++++|++|| |++||+| |||++|...+|.+++.+++
T Consensus 3 ~~~~~~v~l~~~~-~~lG~~i~~g~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~ 81 (196)
T 3gsl_A 3 SMEYEEITLERGN-SGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALK 81 (196)
T ss_dssp CEEEEEEEEECBT-TBSSEEEECCTTSCTTSSCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CcEEEEEEEEECC-CCCCEEEEcccCCcccCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 3578899999986 5599999642 4 899999999999999 9999999 9999999999999999998
Q ss_pred cc-CcEEEEEeCC
Q psy6995 312 TS-SLVTVTVIPA 323 (342)
Q Consensus 312 ts-~~V~v~VipP 323 (342)
.. ..|+++|...
T Consensus 82 ~~g~~v~l~v~r~ 94 (196)
T 3gsl_A 82 EAGSIVRLYVMRR 94 (196)
T ss_dssp TSCSEEEEEEEEE
T ss_pred hCCCcEEEEEEec
Confidence 64 4688888754
No 112
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=99.04 E-value=6.1e-10 Score=91.87 Aligned_cols=71 Identities=20% Similarity=0.280 Sum_probs=60.8
Q ss_pred EeecCCCCCCCeEEcC-------C-c-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhcc---CcEE
Q psy6995 253 TLKRNGLGQLGFHVQP-------D-G-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTS---SLVT 317 (342)
Q Consensus 253 ~LrR~~~gqLGFhV~~-------E-G-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts---~~V~ 317 (342)
++.|+....|||.+.. + | ||.+|.++|+|++|| |++||+| |||++|..++|++++++|+.+ ..|.
T Consensus 41 ~i~k~~~~~lG~~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~ 120 (131)
T 1wfg_A 41 SVPRDSGAMLGLKVVGGKMTESGRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILESKPEPQVE 120 (131)
T ss_dssp CCCSCSCTTTTEEEEEEEECSSSCEEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHHHHHHHHHHTSSSSEEE
T ss_pred EEecCCCCCCCEEEecCccCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEE
Confidence 4445566899999943 1 3 799999999999999 9999999 999999999999999999865 4688
Q ss_pred EEEeCC
Q psy6995 318 VTVIPA 323 (342)
Q Consensus 318 v~VipP 323 (342)
|+|..+
T Consensus 121 l~v~R~ 126 (131)
T 1wfg_A 121 LVVSRS 126 (131)
T ss_dssp EEEEEE
T ss_pred EEEEcC
Confidence 888754
No 113
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=99.04 E-value=8.6e-10 Score=86.34 Aligned_cols=78 Identities=18% Similarity=0.221 Sum_probs=66.7
Q ss_pred CCceEEEeecCCCCCCCeEEcC-----------Cc-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhc
Q psy6995 247 SPAQELTLKRNGLGQLGFHVQP-----------DG-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKT 312 (342)
Q Consensus 247 cet~El~LrR~~~gqLGFhV~~-----------EG-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrt 312 (342)
+++++++|.|....+|||.+.. .| +|.+|.++++|+ |||++||+| |||++|.+.+|.+.+.+++.
T Consensus 6 ~~~~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~gv~V~~V~~~spA~-agl~~GD~I~~vng~~v~~~~~~~~~~~~~~ 84 (107)
T 2h2b_A 6 WEQHTVTLHRAPGFGFGIAISGGRDNPHFQSGETSIVISDVLKGGPAE-GQLQENDRVAMVNGVSMDNVEHAFAVQQLRK 84 (107)
T ss_dssp EEEEEEEEECBTTTBTCEEEEECTTSCCTTTCCCCEEEEEECTTSTTB-TTBCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred ceeEEEEEEeCCCCccCEEEecCcCCCcccCCCCCEEEEEECCCCchh-hCCCCCCEEEEECCEECCCccHHHHHHHhhC
Confidence 4678899999877899999962 24 799999999999 999999999 99999999999999988874
Q ss_pred -cCcEEEEEeCCCC
Q psy6995 313 -SSLVTVTVIPALS 325 (342)
Q Consensus 313 -s~~V~v~VipP~~ 325 (342)
...|.|+|.....
T Consensus 85 ~g~~v~l~v~R~~~ 98 (107)
T 2h2b_A 85 SGKNAKITIRRKKG 98 (107)
T ss_dssp CCSEEEEEEEEESC
T ss_pred CCCEEEEEEEECCC
Confidence 4578888876543
No 114
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=99.04 E-value=7.6e-10 Score=87.76 Aligned_cols=76 Identities=25% Similarity=0.446 Sum_probs=67.3
Q ss_pred CceEEEeecCCCCCCCeEEcC-----Cc-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhccCcEEEE
Q psy6995 248 PAQELTLKRNGLGQLGFHVQP-----DG-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTSSLVTVT 319 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~-----EG-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts~~V~v~ 319 (342)
..+++.+.+.+...|||.+.. .| +|+.|.++++|++|||++||+| |||++|.+.+|++++.+|+....+.|+
T Consensus 15 ~~~~v~~~~~~~~~lG~~l~~~~~~~~gv~V~~V~~~s~A~~aGL~~GD~Il~vng~~v~~~~~~~~~~~~~~~~~v~l~ 94 (114)
T 1x5n_A 15 KEKKVFISLVGSRGLGCSISSGPIQKPGIFISHVKPGSLSAEVGLEIGDQIVEVNGVDFSNLDHKEAVNVLKSSRSLTIS 94 (114)
T ss_dssp SSEEEEECCCSSCCCCEEEEECCSSSCSEEEEEECTTSTTTTTTCCTTCEEEEETTEETTSCCTTHHHHHHHHCSSEEEE
T ss_pred CcEEEEEEEcCCCceeEEEeecCCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCeEEEE
Confidence 467888888888899999963 24 8999999999999999999999 999999999999999999977788998
Q ss_pred EeCC
Q psy6995 320 VIPA 323 (342)
Q Consensus 320 VipP 323 (342)
|...
T Consensus 95 v~r~ 98 (114)
T 1x5n_A 95 IVAA 98 (114)
T ss_dssp ECSS
T ss_pred EEcC
Confidence 8764
No 115
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=99.04 E-value=6.4e-10 Score=84.75 Aligned_cols=72 Identities=24% Similarity=0.267 Sum_probs=60.3
Q ss_pred eEEEeecCCCCCCCeEEcCC-----c-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhcc-CcEEEEE
Q psy6995 250 QELTLKRNGLGQLGFHVQPD-----G-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTS-SLVTVTV 320 (342)
Q Consensus 250 ~El~LrR~~~gqLGFhV~~E-----G-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts-~~V~v~V 320 (342)
..++++ +.+.|||.+... | +|.+|.++++|++|||++||+| |||++|.+.+|.++..+|+.. ..|.|++
T Consensus 5 ~~v~~~--~~~~~G~~l~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v 82 (91)
T 2pkt_A 5 QQIDLQ--GPGPWGFRLVGGKDFEQPLAISRVTPGSKAALANLCIGDVITAIDGENTSNMTHLEAQNRIKGCTDNLTLTV 82 (91)
T ss_dssp EEEEEE--SSSCCSEEEEEEGGGTEEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEE
T ss_pred EEEEEC--CCCCCCEEEEccCCCCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEE
Confidence 344454 347899999643 3 8999999999999999999999 999999999999999999863 3688888
Q ss_pred eCC
Q psy6995 321 IPA 323 (342)
Q Consensus 321 ipP 323 (342)
...
T Consensus 83 ~R~ 85 (91)
T 2pkt_A 83 ARS 85 (91)
T ss_dssp EEE
T ss_pred EEC
Confidence 754
No 116
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=99.04 E-value=4.7e-10 Score=87.19 Aligned_cols=62 Identities=29% Similarity=0.389 Sum_probs=54.2
Q ss_pred CCCCeEEc-----------------CCc-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhcc--CcEE
Q psy6995 260 GQLGFHVQ-----------------PDG-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTS--SLVT 317 (342)
Q Consensus 260 gqLGFhV~-----------------~EG-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts--~~V~ 317 (342)
..|||.++ ..| +|..|.++++|++|||++||+| |||++|.+.+|++++.+|+.. ..|.
T Consensus 19 ~~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~ 98 (104)
T 3sfj_A 19 LILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQARKRLTKRSEEVVR 98 (104)
T ss_dssp EECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHTCTTCSEEE
T ss_pred CcccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCEEE
Confidence 58999998 224 7999999999999999999999 999999999999999999853 3677
Q ss_pred EEEe
Q psy6995 318 VTVI 321 (342)
Q Consensus 318 v~Vi 321 (342)
|+|.
T Consensus 99 l~v~ 102 (104)
T 3sfj_A 99 LLVT 102 (104)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7764
No 117
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=99.03 E-value=9.4e-10 Score=87.83 Aligned_cols=75 Identities=24% Similarity=0.374 Sum_probs=65.0
Q ss_pred CCceEEEeecCCCCCCCeEEcCC----c-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhccC-cEE
Q psy6995 247 SPAQELTLKRNGLGQLGFHVQPD----G-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTSS-LVT 317 (342)
Q Consensus 247 cet~El~LrR~~~gqLGFhV~~E----G-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts~-~V~ 317 (342)
.+.++++|.|.. .+|||.+... | +|..|.++++|++|| |++||+| |||++|.+.+|.+++.+++... .|.
T Consensus 13 ~~~~~v~l~k~~-~glG~~l~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~ 91 (119)
T 1tp5_A 13 REPRRIVIHRGS-TGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT 91 (119)
T ss_dssp CSCEEEEEECTT-SCCCEEEEECGGGCCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHTSCSEEE
T ss_pred CccEEEEEEECC-CCccEEEecCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 478899999977 4599999643 4 799999999999999 9999999 9999999999999999998544 688
Q ss_pred EEEeC
Q psy6995 318 VTVIP 322 (342)
Q Consensus 318 v~Vip 322 (342)
|+|..
T Consensus 92 l~v~r 96 (119)
T 1tp5_A 92 IIAQY 96 (119)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88864
No 118
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=99.03 E-value=1.1e-09 Score=87.33 Aligned_cols=79 Identities=30% Similarity=0.406 Sum_probs=67.4
Q ss_pred CCCCceEEEeecCCCCCCCeEEcC----Cc-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhcc-CcE
Q psy6995 245 PGSPAQELTLKRNGLGQLGFHVQP----DG-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTS-SLV 316 (342)
Q Consensus 245 ~Gcet~El~LrR~~~gqLGFhV~~----EG-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts-~~V 316 (342)
..-.+..+.+.+.....|||.+.. +| +|..|.++++|++|||++||+| |||++|.+.+|++++++|+.. ..|
T Consensus 10 ~~ldp~~~~l~~~~~~~~G~~l~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v 89 (114)
T 2edz_A 10 STFNPRECKLSKQEGQNYGFFLRIEKDTDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELVRKSGNSV 89 (114)
T ss_dssp CCCCCEEEEEECCTTCCCSCEEECCTTCCSCEEECCCTTCTTGGGTCCTTCEEEEESSSBCSSSCHHHHHHHHHHTCSEE
T ss_pred hcCCCEEEEEeCCCCCcccEEEEEecCCCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEE
Confidence 344577788888877899998853 34 8999999999999999999999 999999999999999999864 478
Q ss_pred EEEEeCC
Q psy6995 317 TVTVIPA 323 (342)
Q Consensus 317 ~v~VipP 323 (342)
.|+|...
T Consensus 90 ~l~v~R~ 96 (114)
T 2edz_A 90 TLLVLDG 96 (114)
T ss_dssp EEEEECH
T ss_pred EEEEEEC
Confidence 8888754
No 119
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=99.02 E-value=1.4e-09 Score=87.85 Aligned_cols=76 Identities=12% Similarity=0.183 Sum_probs=65.9
Q ss_pred CceEEEeecCCCCCCCeEEcCC------ceEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhcc-CcEE
Q psy6995 248 PAQELTLKRNGLGQLGFHVQPD------GLVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTS-SLVT 317 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~E------G~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts-~~V~ 317 (342)
+.++++|.|...+.|||.+... =+|.+|.++++|++|| |++||+| |||++|...++++++++|+.. ..|.
T Consensus 24 ~~~~V~l~~~~~~~lG~~l~~~~~~~~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~~v~ 103 (114)
T 2gzv_A 24 VPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVT 103 (114)
T ss_dssp CCEEEEEECCTTSCCSEEEEECCC--CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEE
T ss_pred CCEEEEEEECCCCcEeEEEEeCCCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 5788999999888899999632 2699999999999999 9999999 999999999999999999844 4677
Q ss_pred EEEeCC
Q psy6995 318 VTVIPA 323 (342)
Q Consensus 318 v~VipP 323 (342)
|+|...
T Consensus 104 l~v~~~ 109 (114)
T 2gzv_A 104 IHYNKL 109 (114)
T ss_dssp EEEECC
T ss_pred EEEEec
Confidence 777553
No 120
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=99.02 E-value=9e-10 Score=83.74 Aligned_cols=75 Identities=17% Similarity=0.355 Sum_probs=62.4
Q ss_pred CceEEEeecCCCCCCCeEEcCC---------c-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhcc-
Q psy6995 248 PAQELTLKRNGLGQLGFHVQPD---------G-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTS- 313 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~E---------G-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts- 313 (342)
+..++.+.+.. ..|||.+... | +|.+|.++++|++|| |++||+| |||++|..++|++++.+|+..
T Consensus 4 ~~~~v~l~~~~-~~lG~~i~~~~~~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 82 (97)
T 2iwn_A 4 ETFDVELTKNV-QGLGITIAGYIGDKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTG 82 (97)
T ss_dssp EEEEEEEECBT-TBSCEEEECCCCC----CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHTCC
T ss_pred EEEEEEEecCC-CCCcEEEEccCCCCCCCCCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 34566676654 5699999754 4 799999999999999 9999999 999999999999999999854
Q ss_pred CcEEEEEeCC
Q psy6995 314 SLVTVTVIPA 323 (342)
Q Consensus 314 ~~V~v~VipP 323 (342)
..|.|+|..+
T Consensus 83 ~~v~l~v~r~ 92 (97)
T 2iwn_A 83 QTVLLTLMRR 92 (97)
T ss_dssp SEEEEEEEEE
T ss_pred CeEEEEEEeC
Confidence 3688888653
No 121
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=99.02 E-value=7.5e-10 Score=84.99 Aligned_cols=72 Identities=28% Similarity=0.431 Sum_probs=60.3
Q ss_pred CceEEEeecCCCCCCCeEEcC-------------Cc-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHh
Q psy6995 248 PAQELTLKRNGLGQLGFHVQP-------------DG-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLK 311 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~-------------EG-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLr 311 (342)
...++++.++. .|||.+.. .| +|++|.++++|++ ||++||+| |||++|.+++|++++.+++
T Consensus 3 ~~~~v~l~~~~--~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-gL~~GD~I~~vng~~v~~~~~~~~~~~~~ 79 (95)
T 1mfg_A 3 MEIRVRVEKDP--ELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLK 79 (95)
T ss_dssp EEEEEEEECSS--SCSEEEEECBTSCCCSSSTTCCCEEEEEECTTSTTTT-TCCTTCEEEEETTEECTTCBHHHHHHHHH
T ss_pred eEEEEEECCCC--CCCEEEeCCcCccCCccccCCCCEEEEEECCCCchhh-CCCCCCEEEEECCEEcCCCCHHHHHHHhh
Confidence 34566677655 79999963 24 6999999999999 99999999 9999999999999999998
Q ss_pred cc-CcEEEEEeC
Q psy6995 312 TS-SLVTVTVIP 322 (342)
Q Consensus 312 ts-~~V~v~Vip 322 (342)
.. ..|.|+|..
T Consensus 80 ~~~~~v~l~v~R 91 (95)
T 1mfg_A 80 TFQNTVELIIVR 91 (95)
T ss_dssp HCCSEEEEEEEE
T ss_pred cCCCeEEEEEEe
Confidence 54 468888864
No 122
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=99.01 E-value=1.3e-09 Score=89.19 Aligned_cols=74 Identities=18% Similarity=0.261 Sum_probs=63.3
Q ss_pred CceEEEeecCCCCCCCeEEcCC------ceEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhcc---Cc
Q psy6995 248 PAQELTLKRNGLGQLGFHVQPD------GLVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTS---SL 315 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~E------G~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts---~~ 315 (342)
+..+++|.|.. .+|||.+... =+|..|.++|+|++|| |++||+| |||++|..++|++++++|+.. ..
T Consensus 18 ~~~~v~l~~~~-~g~G~~i~g~~~~~~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~g~~ 96 (129)
T 2kpk_A 18 KFIHTKLRKSS-RGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGAS 96 (129)
T ss_dssp EEEEEEEEECS-SCCSEEEEEEEETTEEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTEE
T ss_pred cEEEEEEEECC-CcccEEEeCccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCe
Confidence 45677888854 6899999751 2899999999999999 9999999 999999999999999999865 35
Q ss_pred EEEEEeC
Q psy6995 316 VTVTVIP 322 (342)
Q Consensus 316 V~v~Vip 322 (342)
|.|+|..
T Consensus 97 v~l~v~R 103 (129)
T 2kpk_A 97 VDLELCR 103 (129)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 8888864
No 123
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.01 E-value=5.6e-10 Score=87.27 Aligned_cols=74 Identities=20% Similarity=0.276 Sum_probs=61.5
Q ss_pred ceEEEeecCCCCCCCeEEcCCc--eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhcc-CcEEEEEeCC
Q psy6995 249 AQELTLKRNGLGQLGFHVQPDG--LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTS-SLVTVTVIPA 323 (342)
Q Consensus 249 t~El~LrR~~~gqLGFhV~~EG--~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts-~~V~v~VipP 323 (342)
...+.+.+.. .+|||.+..+. +|..|.++++|++|||++||+| |||++|..++|++++++|+.. ..|.|+|...
T Consensus 16 ~~~v~l~~~~-~g~G~~~~~~~~~~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~ 94 (100)
T 1whd_A 16 KLQITIRRGK-DGFGFTICCDSPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEIRSCPSEIILLVWRV 94 (100)
T ss_dssp EEEEEEECCS-SSSSCBCCCSSSCBCCBCCTTSHHHHHTCCSSCEEEEETTEECTTCCHHHHHHHHHHCSSEEEEEEEEC
T ss_pred eEEEEEECCC-CeeeEEEeCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEEC
Confidence 3445566643 68999986553 8999999999999999999999 999999999999999999854 4688888654
No 124
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.01 E-value=7.1e-10 Score=88.70 Aligned_cols=75 Identities=19% Similarity=0.264 Sum_probs=64.7
Q ss_pred CceEEEeecCCCCCCCeEEcCC-----------c-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhcc
Q psy6995 248 PAQELTLKRNGLGQLGFHVQPD-----------G-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTS 313 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~E-----------G-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts 313 (342)
+.+++.|.|.....|||.+... | +|++|.++++|+ |||++||+| |||++|..++|++++.+|+..
T Consensus 14 ~~~~v~l~k~~~~glG~~i~gg~~~~~~~~~~~gv~V~~V~~~spA~-~gL~~GD~I~~Vng~~v~~~~~~~~~~~l~~~ 92 (117)
T 2csj_A 14 EQYTVTLQKDSKRGFGIAVSGGRDNPHFENGETSIVISDVLPGGPAD-GLLQENDRVVMVNGTPMEDVLHSFAVQQLRKS 92 (117)
T ss_dssp EEEEEEEECCSSSTTCEEEECCSSCCCCSSCCCBCEEEEECTTSSHH-HHBCTTCEEEEESSCBCBTCCHHHHHHHHHHS
T ss_pred eEEEEEEEECCCCccCEEEeCCcCCccccCCCCCEEEEEECCCCccc-ccCCCCCEEEEECCEECCCcCHHHHHHHHhcC
Confidence 5677888888768999999641 3 899999999997 999999999 999999999999999999854
Q ss_pred C-cEEEEEeCC
Q psy6995 314 S-LVTVTVIPA 323 (342)
Q Consensus 314 ~-~V~v~VipP 323 (342)
. .|.|+|..+
T Consensus 93 ~~~v~l~v~R~ 103 (117)
T 2csj_A 93 GKIAAIVVKRP 103 (117)
T ss_dssp CSEEEEEEEEE
T ss_pred CCeEEEEEEEC
Confidence 4 788888764
No 125
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.01 E-value=2.7e-10 Score=88.17 Aligned_cols=76 Identities=16% Similarity=0.349 Sum_probs=63.3
Q ss_pred CceEEEeecCCCCCCCeEEcC--C---c-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhc-cCcEE
Q psy6995 248 PAQELTLKRNGLGQLGFHVQP--D---G-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKT-SSLVT 317 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~--E---G-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrt-s~~V~ 317 (342)
+...+++.|.. .+|||.+.. + | +|.+|.++++|++|| |++||+| |||++|..++|++++.+|+. ...|+
T Consensus 11 ~~~~v~l~~~~-~g~G~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~ 89 (103)
T 1wfv_A 11 DYFTVDMEKGA-KGFGFSIRGGREYKMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKSGGRRVR 89 (103)
T ss_dssp CCEECCEECCT-TSSSBCCEEETTTTEEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHHHHHCSEEC
T ss_pred eEEEEEEecCC-CcCCEEEeccccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 45666777765 569999963 2 4 789999999999999 9999999 99999999999999999984 34788
Q ss_pred EEEeCCC
Q psy6995 318 VTVIPAL 324 (342)
Q Consensus 318 v~VipP~ 324 (342)
|+|....
T Consensus 90 l~v~R~~ 96 (103)
T 1wfv_A 90 LLLKRGT 96 (103)
T ss_dssp EEEECTT
T ss_pred EEEEECC
Confidence 8887643
No 126
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=98.99 E-value=1e-09 Score=102.13 Aligned_cols=80 Identities=23% Similarity=0.260 Sum_probs=69.5
Q ss_pred CCceEEEeecCCCCCCCeEEcCC-----c-eEEEEcccchhhh-hCCCCCCEE--eecccccCCCHHHHHHHHhccC-cE
Q psy6995 247 SPAQELTLKRNGLGQLGFHVQPD-----G-LVTEVEHMGLAYQ-EGLKQGCRL--ICKVAVSTLSHDQMVDLLKTSS-LV 316 (342)
Q Consensus 247 cet~El~LrR~~~gqLGFhV~~E-----G-~Vt~VE~~g~Ae~-AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts~-~V 316 (342)
++.+.++|.|...++|||.|... | +|.+|.++|+|++ |||++||+| |||++|..++|++++.+|+... .|
T Consensus 76 ~~~r~V~L~k~~~~glGf~I~gg~d~~~gi~V~~V~~gspA~~~aGL~~GD~Il~VNG~~v~~~t~~e~v~~l~~~g~~V 155 (263)
T 1z87_A 76 LQRRRVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEV 155 (263)
T ss_dssp CSSEEECCCTTTTCCCCCEEEEETTTTEEEEEEECCTTSHHHHCTTCCSSCEEEEESSCBCTTSCHHHHHHHHHHCCSCC
T ss_pred CccEEEEEEeCCCCCEeEEEeeccCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCcCHHHHHHHHhcCCCeE
Confidence 36889999998778999999642 3 8999999999999 899999999 9999999999999999999654 78
Q ss_pred EEEEeCCCCC
Q psy6995 317 TVTVIPALSD 326 (342)
Q Consensus 317 ~v~VipP~~d 326 (342)
+|+|....+.
T Consensus 156 ~L~V~R~~~~ 165 (263)
T 1z87_A 156 VLEVKYMKEV 165 (263)
T ss_dssp CEEEECCSSS
T ss_pred EEEEEeCccc
Confidence 8888775443
No 127
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.99 E-value=1.3e-09 Score=87.17 Aligned_cols=75 Identities=24% Similarity=0.313 Sum_probs=61.5
Q ss_pred ceEEEeecCCCCCCCeEEcC------Cc-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhccC-c-E
Q psy6995 249 AQELTLKRNGLGQLGFHVQP------DG-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTSS-L-V 316 (342)
Q Consensus 249 t~El~LrR~~~gqLGFhV~~------EG-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts~-~-V 316 (342)
...+.|.|.....|||.+.. .| +|..|.++++|++|| |++||+| |||++|..++|++++.+|+... . +
T Consensus 16 ~~~v~l~~~~~~~lG~~i~g~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~~~~ 95 (119)
T 1x6d_A 16 IHVTILHKEEGAGLGFSLAGGADLENKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQAREPRQ 95 (119)
T ss_dssp EEEEEEECCTTSCCSEEEECCSSSSCSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHHHTTSSSE
T ss_pred eEEEEEEeCCCCccCEEEeCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeE
Confidence 45556777777899999953 24 799999999999999 9999999 9999999999999999998654 3 4
Q ss_pred EEEEeCC
Q psy6995 317 TVTVIPA 323 (342)
Q Consensus 317 ~v~VipP 323 (342)
.+++...
T Consensus 96 ~l~v~R~ 102 (119)
T 1x6d_A 96 AVIVTRK 102 (119)
T ss_dssp EEEEEEC
T ss_pred EEEEEcC
Confidence 4555543
No 128
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=98.99 E-value=1.1e-09 Score=85.39 Aligned_cols=75 Identities=27% Similarity=0.426 Sum_probs=63.7
Q ss_pred CCCceEEEeecCCCCCCCeEEcC-------------Cc-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHH
Q psy6995 246 GSPAQELTLKRNGLGQLGFHVQP-------------DG-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDL 309 (342)
Q Consensus 246 Gcet~El~LrR~~~gqLGFhV~~-------------EG-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdl 309 (342)
-++..++++.++. .|||.+.. .| +|++|.++++|++ ||++||+| |||++|.+++|++++.+
T Consensus 9 ~~~~~~v~l~~~~--~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-gL~~GD~I~~vng~~v~~~~~~~~~~~ 85 (103)
T 1n7t_A 9 AKQEIRVRVEKDP--ELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSL 85 (103)
T ss_dssp SCCCEEEEEECSS--CCCBEEEECTTSSBCSSCSSCCSEECCCBSSSSTTSS-SCCTTCEEEEETTEECSSCCHHHHHHH
T ss_pred ccEEEEEEEccCC--CccEEEEcccCCCCCccccCCCCEEEEEECCCCchHH-CCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 3567778888865 79999964 24 6999999999999 99999999 99999999999999999
Q ss_pred Hhcc-CcEEEEEeCC
Q psy6995 310 LKTS-SLVTVTVIPA 323 (342)
Q Consensus 310 Lrts-~~V~v~VipP 323 (342)
++.. ..|.|+|...
T Consensus 86 ~~~~g~~v~l~v~R~ 100 (103)
T 1n7t_A 86 LKTFQNTVELIIVRE 100 (103)
T ss_dssp HHHCCSEEEEEEECC
T ss_pred hhcCCCeEEEEEEec
Confidence 9864 4688888754
No 129
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=98.98 E-value=1.8e-09 Score=85.54 Aligned_cols=72 Identities=32% Similarity=0.472 Sum_probs=59.1
Q ss_pred eecCCCCCCCeEEcC----------Cc-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhccC-cEEE
Q psy6995 254 LKRNGLGQLGFHVQP----------DG-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTSS-LVTV 318 (342)
Q Consensus 254 LrR~~~gqLGFhV~~----------EG-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts~-~V~v 318 (342)
+..++.+.|||.+.+ .| +|.+|.++|+|++|| |++||+| |||++|..++|++++.+|+... .|+|
T Consensus 7 ~~~~~~~~~Gf~i~gG~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l 86 (106)
T 4amh_A 7 LVPRGSKGLGFSIAGGVGNQHWPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKNTSDFVYL 86 (106)
T ss_dssp -----CCCSCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHSCCSEEEE
T ss_pred cCCCCCCccCEEEEeccCCccccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEE
Confidence 344566899999951 13 799999999999999 9999999 9999999999999999998654 7899
Q ss_pred EEeCCCC
Q psy6995 319 TVIPALS 325 (342)
Q Consensus 319 ~VipP~~ 325 (342)
+|..+..
T Consensus 87 ~v~R~~~ 93 (106)
T 4amh_A 87 KVAKPGS 93 (106)
T ss_dssp EEECCSS
T ss_pred EEEeCCC
Confidence 9988654
No 130
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.97 E-value=1.2e-09 Score=85.34 Aligned_cols=74 Identities=19% Similarity=0.272 Sum_probs=61.8
Q ss_pred CceEEEeecCCCCCCCeEEcC-----Cc-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhcc-CcEEE
Q psy6995 248 PAQELTLKRNGLGQLGFHVQP-----DG-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTS-SLVTV 318 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~-----EG-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts-~~V~v 318 (342)
++.+++|. +...|||.+.. .+ +|.+|.++++|++|||++||+| |||++|.+.+|.+++.+++.. ..|.|
T Consensus 5 ~~~~v~l~--~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l 82 (103)
T 1wf7_A 5 SSGSVSLV--GPAPWGFRLQGGKDFNMPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNM 82 (103)
T ss_dssp CCEEEEEE--SSSCCSCCEEEETTTTEEEEECCCCTTCHHHHTTCCTTCBEEEETTEECSSCCHHHHHHHHHHCSSEEEE
T ss_pred CEEEEEEe--CCCccCEEEeccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 35666676 44789999963 13 7999999999999999999999 999999999999999999854 46888
Q ss_pred EEeCC
Q psy6995 319 TVIPA 323 (342)
Q Consensus 319 ~VipP 323 (342)
+|...
T Consensus 83 ~v~R~ 87 (103)
T 1wf7_A 83 TLQRA 87 (103)
T ss_dssp EECCC
T ss_pred EEEeC
Confidence 88654
No 131
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=98.96 E-value=2.8e-09 Score=84.02 Aligned_cols=75 Identities=23% Similarity=0.365 Sum_probs=64.2
Q ss_pred ceEEEeecCCCCCCCeEEcCC----c-eEEEEcccchhhhhCC-CCCCEE--eecccccCCCHHHHHHHHhcc--CcEEE
Q psy6995 249 AQELTLKRNGLGQLGFHVQPD----G-LVTEVEHMGLAYQEGL-KQGCRL--ICKVAVSTLSHDQMVDLLKTS--SLVTV 318 (342)
Q Consensus 249 t~El~LrR~~~gqLGFhV~~E----G-~Vt~VE~~g~Ae~AGL-R~G~RL--Icg~sV~~lsHeq~vdlLrts--~~V~v 318 (342)
+.++.|.+...++|||.+..+ | +|.+|.++++|++||| ++||+| |||+++.+++|+++.++|+.. ..+.+
T Consensus 2 ~~~v~l~~~~~~glG~~~~~~~~~~~~~V~~v~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~l 81 (112)
T 1qau_A 2 VISVRLFKRKVGGLGFLVKERVSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVV 81 (112)
T ss_dssp EEEEEEECBTTTBTSEEEEECSSSSCEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTSCHHHHHHHHHHSCSSSEEE
T ss_pred EEEEEEEcCCCCceeEEEEecCCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCcEEE
Confidence 457788777678999999654 2 8999999999999998 999999 999999999999999999863 36888
Q ss_pred EEeCC
Q psy6995 319 TVIPA 323 (342)
Q Consensus 319 ~VipP 323 (342)
++...
T Consensus 82 ~v~R~ 86 (112)
T 1qau_A 82 LILRG 86 (112)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 77654
No 132
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.96 E-value=2.6e-09 Score=86.33 Aligned_cols=73 Identities=19% Similarity=0.272 Sum_probs=60.0
Q ss_pred ceEEEeecCCCCCCCeEEcC-----C--ceEEEEcccchhhhh-CCCCCCEE--eecccccCCCHHHHHHHHhcc-----
Q psy6995 249 AQELTLKRNGLGQLGFHVQP-----D--GLVTEVEHMGLAYQE-GLKQGCRL--ICKVAVSTLSHDQMVDLLKTS----- 313 (342)
Q Consensus 249 t~El~LrR~~~gqLGFhV~~-----E--G~Vt~VE~~g~Ae~A-GLR~G~RL--Icg~sV~~lsHeq~vdlLrts----- 313 (342)
.+.+.+..+ ++|||.+.. . =+|..|.++|+|++| ||++||+| |||++|..++|++++++|+..
T Consensus 19 ~~~~~~~~~--~glG~~i~gg~~~~~~~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~~g 96 (118)
T 1v6b_A 19 VRLLRIKKE--GSLDLALEGGVDSPVGKVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKAWNQGG 96 (118)
T ss_dssp EEEEEEESC--SCCCCEEEEBTTSSSCSEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHHHHHHHHHHHHHHTC
T ss_pred EEEEEECCC--CccCEEEEcccCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhhcCC
Confidence 344444444 589999942 1 389999999999999 99999999 999999999999999999853
Q ss_pred CcEEEEEeCC
Q psy6995 314 SLVTVTVIPA 323 (342)
Q Consensus 314 ~~V~v~VipP 323 (342)
..|+|+|+..
T Consensus 97 ~~v~l~v~r~ 106 (118)
T 1v6b_A 97 DWIDLVVAVC 106 (118)
T ss_dssp SEEEEEEECC
T ss_pred CeEEEEEEeC
Confidence 4788988864
No 133
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=98.95 E-value=2.4e-09 Score=91.53 Aligned_cols=80 Identities=16% Similarity=0.202 Sum_probs=65.7
Q ss_pred ceEEEeecCCCCCCCeEEcC--Cc-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhccC-cEEEEEe
Q psy6995 249 AQELTLKRNGLGQLGFHVQP--DG-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTSS-LVTVTVI 321 (342)
Q Consensus 249 t~El~LrR~~~gqLGFhV~~--EG-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts~-~V~v~Vi 321 (342)
+.++.+.+.....|||.+.. .| +|.+|.++|+|++|| ||+||+| |||++|...+|++++.+|+... .|.|+|.
T Consensus 114 ~~~v~l~~~~~~~lG~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~L~V~ 193 (206)
T 3r0h_A 114 KFNVDLMKKAGKELGLSLSPNEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGANGKVSMEVT 193 (206)
T ss_dssp EEEEEEECCTTCCCCEEEEECSSCEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEE
T ss_pred EEEEEEecCCCCccCeEEEcCCceEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEE
Confidence 34445555555689999963 34 899999999999999 9999999 9999999999999999998644 7889998
Q ss_pred CCCCCCC
Q psy6995 322 PALSDGT 328 (342)
Q Consensus 322 pP~~dg~ 328 (342)
.|.+...
T Consensus 194 R~~~~~~ 200 (206)
T 3r0h_A 194 RPKPTLR 200 (206)
T ss_dssp EECCCCC
T ss_pred eCCCCCC
Confidence 8766553
No 134
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=98.95 E-value=2.3e-09 Score=81.25 Aligned_cols=72 Identities=28% Similarity=0.379 Sum_probs=57.5
Q ss_pred CceEEEeecCCCCCCCeEEcCC----c-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhc---cCcEE
Q psy6995 248 PAQELTLKRNGLGQLGFHVQPD----G-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKT---SSLVT 317 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~E----G-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrt---s~~V~ 317 (342)
+.++++|.|.. .+|||.+... | +|..| ++++|+ |||++||+| |||++|.+.+|++++++|+. ...|.
T Consensus 3 ~~~~v~l~k~~-~g~G~~~~~~~~~~~~~v~~v-~~spA~-aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~ 79 (88)
T 3bpu_A 3 ELITVHIVKGP-MGFGFTIADSPGGGGQRVKQI-VDSPRS-RGLKEGDLIVEVNKKNVQALTHNQVVDMLVESPKGSEVT 79 (88)
T ss_dssp EEEEEEEECBT-TBSSCEEEECTTSSSEEEEEC-CC--CC-TTCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCEEE
T ss_pred cEEEEEEEcCC-CceeEEEEecCCCCcEEEEEe-cCChhH-hCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCCCEEE
Confidence 46788888865 7899999533 5 55555 899999 999999999 99999999999999999984 33688
Q ss_pred EEEeC
Q psy6995 318 VTVIP 322 (342)
Q Consensus 318 v~Vip 322 (342)
|+|..
T Consensus 80 l~v~R 84 (88)
T 3bpu_A 80 LLVQR 84 (88)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 88764
No 135
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.95 E-value=1.6e-09 Score=85.97 Aligned_cols=75 Identities=20% Similarity=0.356 Sum_probs=63.5
Q ss_pred CceEEEeecCCCCCCCeEEcC------Cc-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhcc-CcE
Q psy6995 248 PAQELTLKRNGLGQLGFHVQP------DG-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTS-SLV 316 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~------EG-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts-~~V 316 (342)
+.+++.|.+.. ..|||.+.. .| +|.+|.++++|++|| |++||+| |||++|.+++|++++.+|+.. ..|
T Consensus 17 ~~~~v~l~~~~-~glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v 95 (116)
T 2dm8_A 17 QEMIIEISKGR-SGLGLSIVGGKDTPLNAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAITALRQTPQKV 95 (116)
T ss_dssp SCEEEEEECCS-SCCCCCCBCCTTSSCSSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHHHHHHHHTCCSEE
T ss_pred CEEEEEEEECC-CcccEEEeCCCCCCcCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeE
Confidence 45777787764 689999963 24 789999999999999 9999999 999999999999999999854 478
Q ss_pred EEEEeCC
Q psy6995 317 TVTVIPA 323 (342)
Q Consensus 317 ~v~VipP 323 (342)
+|+|...
T Consensus 96 ~l~v~R~ 102 (116)
T 2dm8_A 96 RLVVYRD 102 (116)
T ss_dssp EEEEECC
T ss_pred EEEEEeC
Confidence 8888753
No 136
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.94 E-value=6.3e-10 Score=87.19 Aligned_cols=74 Identities=18% Similarity=0.237 Sum_probs=60.6
Q ss_pred eEEEeecCCCCCCCeEEcCC-----c-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhcc-CcEEEEE
Q psy6995 250 QELTLKRNGLGQLGFHVQPD-----G-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTS-SLVTVTV 320 (342)
Q Consensus 250 ~El~LrR~~~gqLGFhV~~E-----G-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts-~~V~v~V 320 (342)
+++.++ +...|||.+... + +|.+|.++++|++|||++||+| |||++|.+++|++++++|+.. ..|.|+|
T Consensus 7 ~~v~~~--~~~~lG~~l~~g~~~~~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v 84 (103)
T 1v5l_A 7 GNVVLP--GPAPWGFRLSGGIDFNQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKI 84 (103)
T ss_dssp BCCEEE--SSSCCSBCCEEETTTTEEEECSCBCTTSTTGGGTCCTTCBEEEETTEECSSCCHHHHHHHHTTCCSEEECEE
T ss_pred EEEEEc--CCCCcCEEEeccccCCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEE
Confidence 344443 446899999532 2 8899999999999999999999 999999999999999999864 4788888
Q ss_pred eCCCC
Q psy6995 321 IPALS 325 (342)
Q Consensus 321 ipP~~ 325 (342)
....+
T Consensus 85 ~R~g~ 89 (103)
T 1v5l_A 85 DRAET 89 (103)
T ss_dssp CCCTT
T ss_pred EECCe
Confidence 76543
No 137
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=98.47 E-value=9.3e-11 Score=94.77 Aligned_cols=73 Identities=19% Similarity=0.309 Sum_probs=62.6
Q ss_pred ceEEEeecCCCCCCCeEEcCC-----c-eEEEEcccchhhh-hCCCCCCEE--eecccccCCCHHHHHHHHhccC-cEEE
Q psy6995 249 AQELTLKRNGLGQLGFHVQPD-----G-LVTEVEHMGLAYQ-EGLKQGCRL--ICKVAVSTLSHDQMVDLLKTSS-LVTV 318 (342)
Q Consensus 249 t~El~LrR~~~gqLGFhV~~E-----G-~Vt~VE~~g~Ae~-AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts~-~V~v 318 (342)
.+++.|.|+...+|||.+... | +|+.|.++|+|++ |||++||+| |||++|..+++++++.+|+... .|+|
T Consensus 28 ~~~v~l~k~~~~glG~~l~~g~~~~~gv~V~~V~~~spA~~~aGL~~GD~Il~ING~~v~~~~~~~~~~~l~~~~~~v~l 107 (112)
T 2lob_A 28 IRKVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGEIEF 107 (112)
Confidence 456778888778999999753 4 8999999999999 999999999 9999999999999999998543 5666
Q ss_pred EEe
Q psy6995 319 TVI 321 (342)
Q Consensus 319 ~Vi 321 (342)
+|+
T Consensus 108 ~V~ 110 (112)
T 2lob_A 108 EVV 110 (112)
Confidence 553
No 138
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.93 E-value=2e-09 Score=84.59 Aligned_cols=75 Identities=25% Similarity=0.395 Sum_probs=64.7
Q ss_pred CCceEEEeecCCCCCCCeEEcCC----c-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhcc-CcEE
Q psy6995 247 SPAQELTLKRNGLGQLGFHVQPD----G-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTS-SLVT 317 (342)
Q Consensus 247 cet~El~LrR~~~gqLGFhV~~E----G-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts-~~V~ 317 (342)
.+++.++|.|+. ..|||.+... | +|..|.++++|++|| |++||+| |||++|..++|++++.+++.. ..|.
T Consensus 14 ~~~~~v~l~k~~-~glG~~l~~~~~~~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~~~~~~~~v~ 92 (113)
T 1um7_A 14 REPRKIILHKGS-TGLGFNIVGGEDGEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRAGQSVT 92 (113)
T ss_dssp CSEEEEEEECCS-SCSSBCCBCCSTTCCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHHHHHSCCSEEE
T ss_pred CceEEEEEEECC-CcccEEEEeccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEE
Confidence 367889999976 6799999543 3 689999999999999 9999999 999999999999999999854 4688
Q ss_pred EEEeC
Q psy6995 318 VTVIP 322 (342)
Q Consensus 318 v~Vip 322 (342)
|+|..
T Consensus 93 l~v~r 97 (113)
T 1um7_A 93 IVAQY 97 (113)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 88864
No 139
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.92 E-value=2e-09 Score=84.06 Aligned_cols=75 Identities=20% Similarity=0.262 Sum_probs=63.8
Q ss_pred CceEEEeecCCCCCCCeEEcC-----Cc-eEEEEcccchhhhh-CCCCCCEE--eecccccCCCHHHHHHHHhcc-CcEE
Q psy6995 248 PAQELTLKRNGLGQLGFHVQP-----DG-LVTEVEHMGLAYQE-GLKQGCRL--ICKVAVSTLSHDQMVDLLKTS-SLVT 317 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~-----EG-~Vt~VE~~g~Ae~A-GLR~G~RL--Icg~sV~~lsHeq~vdlLrts-~~V~ 317 (342)
+.+++++.+.+...|||.+.. .+ +|.+|.++++|++| ||++||+| |||++|.+. |++++.+++.. ..|.
T Consensus 9 ~~~~~~v~~~~~~~~G~~~~gg~~~~~~v~V~~V~~~spA~~agGL~~GD~I~~ing~~v~~~-~~~~~~~~~~~~~~v~ 87 (100)
T 2edp_A 9 SFQYVPVQLQGGAPWGFTLKGGLEHCEPLTVSKIEDGGKAALSQKMRTGDELVNINGTPLYGS-RQEALILIKGSFRILK 87 (100)
T ss_dssp CCEEEEEECCSCSCCCCCEEEEGGGTEEEEECCCCTTSHHHHHTSCCTTCEEEEETTEECCSC-SHHHHHHHHTCCSSCE
T ss_pred CcEEEEEEECCCCCcCEEEeccCCCCCCeEEEEECCCCHHHHcCCCCCCCEEEEECCEEccch-HHHHHHHHHhCCCeEE
Confidence 567777777766789999963 23 78999999999999 99999999 999999997 99999999864 4788
Q ss_pred EEEeCC
Q psy6995 318 VTVIPA 323 (342)
Q Consensus 318 v~VipP 323 (342)
|+|...
T Consensus 88 l~v~R~ 93 (100)
T 2edp_A 88 LIVRRR 93 (100)
T ss_dssp EEEEEC
T ss_pred EEEEeC
Confidence 888765
No 140
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.90 E-value=3.8e-09 Score=86.73 Aligned_cols=73 Identities=21% Similarity=0.281 Sum_probs=61.5
Q ss_pred CceEEEeecCCCCCCCeEEcCC--c-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhc----cCcEEE
Q psy6995 248 PAQELTLKRNGLGQLGFHVQPD--G-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKT----SSLVTV 318 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~E--G-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrt----s~~V~v 318 (342)
.+..+.|..+ ...+||+++.+ + +|.+|+++++|++|||++||+| |||++|...+++++..+++. ...|.|
T Consensus 17 ~~~~l~l~~~-~~g~G~~l~~~~~~~~I~~V~~gSpA~~AGL~~GD~I~~Ing~~v~~~s~~dv~~~i~~~~~~g~~v~L 95 (101)
T 3qik_A 17 LAKRLLILPQ-EEDYGFDIEEKNKAVVVKSVQRGSLAEVAGLQVGRKIYSINEDLVFLRPFSEVESILNQSFCSRRPLRL 95 (101)
T ss_dssp TEEEEEECCC-SSSSSEEEEEETTEEEEEEECTTSHHHHHTCCTTCBEEEETTEESTTSCHHHHHHHHHHHHHTTCCEEE
T ss_pred ecCeEEEEeC-CCcccEEEEccCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEEcCcCCHHHHHHHHHHhhccCCeEEE
Confidence 3556666665 47799999754 2 8999999999999999999999 99999999999999999986 346888
Q ss_pred EEe
Q psy6995 319 TVI 321 (342)
Q Consensus 319 ~Vi 321 (342)
+|.
T Consensus 96 LV~ 98 (101)
T 3qik_A 96 LVA 98 (101)
T ss_dssp EEE
T ss_pred EEe
Confidence 775
No 141
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=98.90 E-value=6.8e-09 Score=88.74 Aligned_cols=76 Identities=24% Similarity=0.217 Sum_probs=65.0
Q ss_pred CceEEEeecCCCCCCCeEEcC-------Cc-eEEEEcccchhhhhC-CCCCCEE--eecccccC--CCHHHHHHHHhccC
Q psy6995 248 PAQELTLKRNGLGQLGFHVQP-------DG-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVST--LSHDQMVDLLKTSS 314 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~-------EG-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~--lsHeq~vdlLrts~ 314 (342)
+..++.|.|.+ .+|||.+.. +| +|.+|.++|+|++|| ||+||+| |||++|.+ .+|++++.+|+...
T Consensus 18 ~~~~v~~~~~~-~~lG~~i~~g~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~~~~ 96 (206)
T 3r0h_A 18 KKILIELKVEK-KPMGVIVCGGKNNHVTTGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLKVHQLFHTTY 96 (206)
T ss_dssp SCEEEEEECTT-SCCCEEEECCSSSSCCSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGGSCHHHHHHHHHSCC
T ss_pred CEEEEEEEeCC-CCcCEEEecccCCCCCCCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCccCHHHHHHHHHhcC
Confidence 56778888865 899999953 24 799999999999998 9999999 99999999 99999999998643
Q ss_pred -c-EEEEEeCCC
Q psy6995 315 -L-VTVTVIPAL 324 (342)
Q Consensus 315 -~-V~v~VipP~ 324 (342)
. |+|+|....
T Consensus 97 ~~~v~l~v~R~~ 108 (206)
T 3r0h_A 97 EKAVTLTVFRAD 108 (206)
T ss_dssp SSEEEEEEECCS
T ss_pred CCceEEEEEecc
Confidence 5 888887653
No 142
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=98.89 E-value=2.2e-08 Score=96.26 Aligned_cols=81 Identities=20% Similarity=0.298 Sum_probs=68.4
Q ss_pred cCCCCCceEEEeecCCCCCCCeEEcCC--c------eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHh
Q psy6995 243 ATPGSPAQELTLKRNGLGQLGFHVQPD--G------LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLK 311 (342)
Q Consensus 243 VT~Gcet~El~LrR~~~gqLGFhV~~E--G------~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLr 311 (342)
.+..-..+++.+.|.....|||.+..+ | +|.+|.++|+|++|| |++||+| |||++|...+|++++.+|+
T Consensus 199 ~~~~~~~~~V~i~k~~ge~lG~~i~~~~~g~~~~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~~~~~l~ 278 (388)
T 3suz_A 199 FSNSENCKELQLEKHKGEILGVVVVESGWGSILPTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIK 278 (388)
T ss_dssp TCCSSCCEEEEECCCSSCCCCCCCBCC---CCSCCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTTHHHHTT
T ss_pred hcccccceEEEEECCCCCceeEEEEecCCCCcCCCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHHHHHHHH
Confidence 445556789999997657899999764 3 899999999999999 9999999 9999999999999999998
Q ss_pred cc---CcEEEEEeCC
Q psy6995 312 TS---SLVTVTVIPA 323 (342)
Q Consensus 312 ts---~~V~v~VipP 323 (342)
.. ..|+|+|.+.
T Consensus 279 ~~~~~~~v~l~v~r~ 293 (388)
T 3suz_A 279 GLKNQTQVKLNIVSC 293 (388)
T ss_dssp TCTTCSCEEEEEEEC
T ss_pred hccCCCccccccccc
Confidence 64 2488887653
No 143
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=98.89 E-value=8e-09 Score=78.18 Aligned_cols=74 Identities=19% Similarity=0.324 Sum_probs=62.1
Q ss_pred ceEEEeecCCC-CCCCeEEcCCc-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhcc-CcEEEEEeC
Q psy6995 249 AQELTLKRNGL-GQLGFHVQPDG-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTS-SLVTVTVIP 322 (342)
Q Consensus 249 t~El~LrR~~~-gqLGFhV~~EG-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts-~~V~v~Vip 322 (342)
+.++.+.++.. .+|||.+. .| +|.+|.++++|++|| |++||+| |||++|..++++++.++|+.. ..+.+++..
T Consensus 3 ~~~v~~~~~~~~~~~g~~~~-~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~r 81 (92)
T 3cyy_A 3 PTKVTLVKSAKNEEYGLRLA-SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMVVQR 81 (92)
T ss_dssp CEEEEEECSSTTSCCCEEEE-EEEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEEEC
T ss_pred cEEEEEEeCCCCCCCCEEEe-CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEEEEe
Confidence 45667666544 79999987 55 799999999999999 9999999 999999999999999999854 467888865
Q ss_pred C
Q psy6995 323 A 323 (342)
Q Consensus 323 P 323 (342)
.
T Consensus 82 ~ 82 (92)
T 3cyy_A 82 D 82 (92)
T ss_dssp -
T ss_pred C
Confidence 3
No 144
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.88 E-value=8.1e-09 Score=80.66 Aligned_cols=74 Identities=26% Similarity=0.393 Sum_probs=61.7
Q ss_pred CCceEEEeecCCCCCCCeEEcCC--c-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhcc---CcEEE
Q psy6995 247 SPAQELTLKRNGLGQLGFHVQPD--G-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTS---SLVTV 318 (342)
Q Consensus 247 cet~El~LrR~~~gqLGFhV~~E--G-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts---~~V~v 318 (342)
.+...+.|.+.. .+|||.+.+. | +|++|.+. |++|||++||+| |||++|.+++|++++++|+.. ..|.|
T Consensus 9 ~~~~~v~l~~~~-~g~G~~i~~~~~Gv~V~~v~~~--a~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l 85 (96)
T 1ujv_A 9 AELMTLTIVKGA-QGFGFTIADSPTGQRVKQILDI--QGCPGLCEGDLIVEINQQNVQNLSHTEVVDILKDCPIGSETSL 85 (96)
T ss_dssp CCCEEEEEECCS-SSSSEEEEEETTEEEEEEESCG--GGSTTCCSSCEEEEETTEECSSCCHHHHHHHHHHSCTTSEEEE
T ss_pred ceEEEEEEEeCC-CceeEEEEcCCCCEEEEEEecc--cccCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEEE
Confidence 356777787754 7899999643 4 69999983 899999999999 999999999999999999963 46888
Q ss_pred EEeCC
Q psy6995 319 TVIPA 323 (342)
Q Consensus 319 ~VipP 323 (342)
+|...
T Consensus 86 ~v~R~ 90 (96)
T 1ujv_A 86 IIHRG 90 (96)
T ss_dssp EEECC
T ss_pred EEEEC
Confidence 88764
No 145
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=98.88 E-value=8e-09 Score=83.18 Aligned_cols=73 Identities=21% Similarity=0.344 Sum_probs=61.1
Q ss_pred CceEEEeecCCCCCCCeEEcCC----c-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhccC--cEEE
Q psy6995 248 PAQELTLKRNGLGQLGFHVQPD----G-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTSS--LVTV 318 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~E----G-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts~--~V~v 318 (342)
.++.+.|.|.. .+|||.+..+ | +|..|.++++|++|||++||+| |||++|.+++++++.++|+... .+.+
T Consensus 9 ~~r~v~l~~~~-~g~G~~l~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~l 87 (128)
T 2kjd_A 9 RPRLCTMKKGP-SGYGFNLHSDKSKPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLL 87 (128)
T ss_dssp CCEEEEEECCS-SSCCEEEEECSSSCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTTCSEEEEE
T ss_pred CcEEEEEecCC-CcccEEEEecCCCCCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCEEEE
Confidence 46777888876 5699999654 3 8999999999999999999999 9999999999999999998654 3445
Q ss_pred EEe
Q psy6995 319 TVI 321 (342)
Q Consensus 319 ~Vi 321 (342)
++.
T Consensus 88 ~v~ 90 (128)
T 2kjd_A 88 VVD 90 (128)
T ss_dssp EEC
T ss_pred EEE
Confidence 553
No 146
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=98.88 E-value=8.2e-09 Score=83.68 Aligned_cols=74 Identities=30% Similarity=0.467 Sum_probs=60.8
Q ss_pred ceEEEeecCCCCCCCeEEcCC--------c-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhcc---
Q psy6995 249 AQELTLKRNGLGQLGFHVQPD--------G-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTS--- 313 (342)
Q Consensus 249 t~El~LrR~~~gqLGFhV~~E--------G-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts--- 313 (342)
...+.+.+. ...|||.+... | +|.+|.++++|++|| |++||+| |||++|..+++++++++|+..
T Consensus 31 ~~~v~l~~~-~~~lG~~l~~~~~~~~g~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~g 109 (121)
T 2kom_A 31 RLNIQLKKG-TEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQEEVVSLLRSTKME 109 (121)
T ss_dssp EEEEEEECC-TTCCCEEEECCCCSSSSSCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCHHHHHHHHHHCCSS
T ss_pred EEEEEEEcC-CCcEeEEEEeccCCcCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCC
Confidence 344445554 36799999643 2 899999999999999 9999999 999999999999999999863
Q ss_pred CcEEEEEeCC
Q psy6995 314 SLVTVTVIPA 323 (342)
Q Consensus 314 ~~V~v~VipP 323 (342)
..|.|+|...
T Consensus 110 ~~v~l~v~R~ 119 (121)
T 2kom_A 110 GTVSLLVFRQ 119 (121)
T ss_dssp CEEEEEEEEC
T ss_pred CEEEEEEEeC
Confidence 4688888654
No 147
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=98.86 E-value=5.7e-09 Score=86.45 Aligned_cols=76 Identities=22% Similarity=0.326 Sum_probs=63.6
Q ss_pred CCceEEEeecCCCCCCCeEEcCC--c-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhccC---cEEE
Q psy6995 247 SPAQELTLKRNGLGQLGFHVQPD--G-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTSS---LVTV 318 (342)
Q Consensus 247 cet~El~LrR~~~gqLGFhV~~E--G-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts~---~V~v 318 (342)
-+.+++.|.|. ..+|||++.+. | +|..|.+ +|+.||||+||+| |||++|..++|+|++++|+... .|+|
T Consensus 11 ~~~~~V~L~Kg-~~G~GFsI~~~~~g~~V~~I~~--~~~~aGL~~GD~Il~VNG~~v~~~~h~evv~~lk~~~~G~~v~L 87 (113)
T 3soe_A 11 GLLVTIPLIKG-PKGFGFAIADSPTGQKVKMILD--SQWCQGLQKGDIIKEIYHQNVQNLTHLQVVEVLKQFPVGADVPL 87 (113)
T ss_dssp CEEEEEEEECB-TTBSSEEEEEETTEEEEEEESC--GGGSTTCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTCEEEE
T ss_pred CCEEEEEEEEC-CCcccEEEeCCCCCcEEEEecC--hHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEEE
Confidence 45688899996 46899999642 3 7888877 5999999999999 9999999999999999999642 6899
Q ss_pred EEeCCCC
Q psy6995 319 TVIPALS 325 (342)
Q Consensus 319 ~VipP~~ 325 (342)
+|.....
T Consensus 88 ~V~R~g~ 94 (113)
T 3soe_A 88 LILRGGP 94 (113)
T ss_dssp EEEESSC
T ss_pred EEEECCc
Confidence 9887554
No 148
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.86 E-value=1.1e-08 Score=81.56 Aligned_cols=75 Identities=17% Similarity=0.295 Sum_probs=63.5
Q ss_pred CceEEEeecCCCCCCCeEEcCC---c-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhc-cCcEEEEE
Q psy6995 248 PAQELTLKRNGLGQLGFHVQPD---G-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKT-SSLVTVTV 320 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~E---G-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrt-s~~V~v~V 320 (342)
+++.+.+.+.. ..|||.+... | +|.+|.++++|++|||++||+| |||++|.+.+|.+.+.+++. ...|+|+|
T Consensus 19 ~~~~v~l~~~~-~~lG~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~~~~~~~~~~g~~v~l~v 97 (117)
T 1uit_A 19 EPRHVKVQKGS-EPLGISIVSGEKGGIYVSKVTVGSIAHQAGLEYGDQLLEFNGINLRSATEQQARLIIGQQCDTITILA 97 (117)
T ss_dssp CCEEEEEECSS-CCCCEEEEECTTSCEEEEEECTTSHHHHHTCCTTCEECEETTEETTTCCHHHHHHHTTSCCSEEEEEE
T ss_pred CCEEEEEEeCC-CCccEEEEccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEE
Confidence 56788888865 7899999533 4 7999999999999999999999 99999999999999977764 44788888
Q ss_pred eCC
Q psy6995 321 IPA 323 (342)
Q Consensus 321 ipP 323 (342)
...
T Consensus 98 ~r~ 100 (117)
T 1uit_A 98 QYN 100 (117)
T ss_dssp CCC
T ss_pred EEC
Confidence 754
No 149
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=98.85 E-value=8.1e-09 Score=86.46 Aligned_cols=75 Identities=25% Similarity=0.413 Sum_probs=61.7
Q ss_pred ceEEEeecCCCCCCCeEEcC----------Cc-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhccC
Q psy6995 249 AQELTLKRNGLGQLGFHVQP----------DG-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTSS 314 (342)
Q Consensus 249 t~El~LrR~~~gqLGFhV~~----------EG-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts~ 314 (342)
+.++.+.+.. ..|||.+.. .| +|++|.++|+|++|| ||+||+| |||++|.+++|++++++|+...
T Consensus 101 ~~~v~l~~~~-~~lG~~~~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~ 179 (196)
T 3gsl_A 101 VMEIKLIKGP-KGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNTY 179 (196)
T ss_dssp EEEEEEEEBT-TBSCEEEEESBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCBHHHHHHHHHSCC
T ss_pred cEEEEEecCC-CCceEEEEccCCCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCCcCCCCCHHHHHHHHHcCC
Confidence 3445555544 489999952 23 899999999999999 9999999 9999999999999999999655
Q ss_pred -cEEEEEeCCC
Q psy6995 315 -LVTVTVIPAL 324 (342)
Q Consensus 315 -~V~v~VipP~ 324 (342)
.|.|+|..+.
T Consensus 180 ~~v~l~v~R~~ 190 (196)
T 3gsl_A 180 DVVYLKVAKPS 190 (196)
T ss_dssp EEEEEEEEEES
T ss_pred CeEEEEEeCCC
Confidence 6888887654
No 150
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=98.84 E-value=6.5e-09 Score=86.80 Aligned_cols=77 Identities=25% Similarity=0.305 Sum_probs=62.6
Q ss_pred ceEEEeecCC---CCCCCeEEcC-----------------Cc-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHH
Q psy6995 249 AQELTLKRNG---LGQLGFHVQP-----------------DG-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQ 305 (342)
Q Consensus 249 t~El~LrR~~---~gqLGFhV~~-----------------EG-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq 305 (342)
.+.+.|.+.+ .+.|||.+.+ .| +|++|.++++|++|||++||+| |||++|..++|++
T Consensus 24 ~~~v~l~~~~~~~~~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~ 103 (139)
T 2vz5_A 24 VQRVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQ 103 (139)
T ss_dssp EEEEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHH
T ss_pred eEEEEEEEcCCCCcccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEEcCCCCHHH
Confidence 4556666643 3589999832 34 8999999999999999999999 9999999999999
Q ss_pred HHHHHhcc--CcEEEEEeCCCC
Q psy6995 306 MVDLLKTS--SLVTVTVIPALS 325 (342)
Q Consensus 306 ~vdlLrts--~~V~v~VipP~~ 325 (342)
++++|+.. ..|.|+|.....
T Consensus 104 ~~~~l~~~~g~~v~l~v~R~g~ 125 (139)
T 2vz5_A 104 ARKRLTKRSEEVVRLLVTRQSL 125 (139)
T ss_dssp HHHHHCCTTCSEEEEEEEECC-
T ss_pred HHHHHHhCCCCEEEEEEEECCE
Confidence 99999863 368898887543
No 151
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.84 E-value=7e-09 Score=89.07 Aligned_cols=77 Identities=23% Similarity=0.313 Sum_probs=67.3
Q ss_pred CCceEEEeecCCCCCCCeEEcCC---------c-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhcc
Q psy6995 247 SPAQELTLKRNGLGQLGFHVQPD---------G-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTS 313 (342)
Q Consensus 247 cet~El~LrR~~~gqLGFhV~~E---------G-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts 313 (342)
.++++++|.|....+|||.+... | +|.+|.++++|++|| |++||+| |||+.|..++|+++..+|+..
T Consensus 5 ~~~~~v~l~~~~~~glG~~i~~~~~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 84 (196)
T 1p1d_A 5 TETTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDS 84 (196)
T ss_dssp CEEEEEEEECBTTTBCCCEEEECSSCSSSCSCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHHHHHHTC
T ss_pred cEEEEEEEEeCCCCccCEEEeCCcCCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 47889999998779999999753 2 699999999999999 9999999 999999999999999999864
Q ss_pred ---CcEEEEEeCC
Q psy6995 314 ---SLVTVTVIPA 323 (342)
Q Consensus 314 ---~~V~v~VipP 323 (342)
..|+|++...
T Consensus 85 ~~g~~v~l~v~R~ 97 (196)
T 1p1d_A 85 SITSKVTLEIEFD 97 (196)
T ss_dssp CSSSEEEEEEEEC
T ss_pred CCCCeEEEEEEec
Confidence 3688887643
No 152
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=98.83 E-value=1.3e-08 Score=77.21 Aligned_cols=71 Identities=17% Similarity=0.219 Sum_probs=57.3
Q ss_pred EEeecC-C-CCCCCeEEcC--Cc-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhc---cCcEEEEEe
Q psy6995 252 LTLKRN-G-LGQLGFHVQP--DG-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKT---SSLVTVTVI 321 (342)
Q Consensus 252 l~LrR~-~-~gqLGFhV~~--EG-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrt---s~~V~v~Vi 321 (342)
+.+.+. + ...|||.+.. .| +|.+|.++++|++|||++||+| |||++|...+++++.++|+. ...|.|+|.
T Consensus 7 ~~~~~~~~~~~~lG~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~ 86 (90)
T 2eaq_A 7 ISINQTPGKSLDFGFTIKWDIPGIFVASVEAGSPAEFSQLQVDDEIIAINNTKFSYNDSKEWEEAMAKAQETGHLVMDVR 86 (90)
T ss_dssp EEEECCTTCSSCCSEEEEEETTEEEEEEECTTSHHHHTTCCTTCEEEEETTEECCTTCHHHHHHHHHHHHHHTEEEEEEE
T ss_pred EEEEecCCCCCcccEEEEecCCCEEEEEECCCChHHHcCCCCCCEEEEECCEEccCCCHHHHHHHHHhcCCCCEEEEEEE
Confidence 344443 2 2589998853 34 7899999999999999999999 99999988899999999974 346888775
Q ss_pred C
Q psy6995 322 P 322 (342)
Q Consensus 322 p 322 (342)
.
T Consensus 87 R 87 (90)
T 2eaq_A 87 R 87 (90)
T ss_dssp E
T ss_pred e
Confidence 3
No 153
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.83 E-value=1.3e-08 Score=87.26 Aligned_cols=74 Identities=22% Similarity=0.331 Sum_probs=64.1
Q ss_pred ceEEEeecCCCCCCCeEEcCC-----c-eEEEEcccchhhhh-CCCCCCEE--eecccccCCCHHHHHHHHhccC-cEEE
Q psy6995 249 AQELTLKRNGLGQLGFHVQPD-----G-LVTEVEHMGLAYQE-GLKQGCRL--ICKVAVSTLSHDQMVDLLKTSS-LVTV 318 (342)
Q Consensus 249 t~El~LrR~~~gqLGFhV~~E-----G-~Vt~VE~~g~Ae~A-GLR~G~RL--Icg~sV~~lsHeq~vdlLrts~-~V~v 318 (342)
.+.+.|.|...++|||.+... | +|+.|.++++|++| ||++||+| |||++|.+.+|++++.+|+... .|+|
T Consensus 8 ~~~v~l~~~~~~~lG~~i~~~~~~~~~~~V~~v~~~spA~~aggl~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l 87 (200)
T 2qt5_A 8 STVVELMKKEGTTLGLTVSGGIDKDGKPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFRHDEIISLLKNVGERVVL 87 (200)
T ss_dssp EEEEEEECCTTCCCCEEEECCTTSSSCSEEEEECTTSHHHHTTSCCTTCEEEEETTEECTTSCHHHHHHHHHTCCSEEEE
T ss_pred CEEEEEEeCCCCCCCEEEecccCCCCCeEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEE
Confidence 467788888789999999532 3 79999999999999 99999999 9999999999999999998544 6888
Q ss_pred EEeC
Q psy6995 319 TVIP 322 (342)
Q Consensus 319 ~Vip 322 (342)
+|..
T Consensus 88 ~v~R 91 (200)
T 2qt5_A 88 EVEY 91 (200)
T ss_dssp EEEE
T ss_pred EEec
Confidence 8864
No 154
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=98.82 E-value=1.7e-08 Score=74.05 Aligned_cols=68 Identities=19% Similarity=0.308 Sum_probs=57.7
Q ss_pred eecCCCCCCCeEEcCCc-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhccC-cEEEEEeC
Q psy6995 254 LKRNGLGQLGFHVQPDG-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTSS-LVTVTVIP 322 (342)
Q Consensus 254 LrR~~~gqLGFhV~~EG-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts~-~V~v~Vip 322 (342)
+......+|||.+. .| +|.+|.++++|++|| |++||+| |||++|..++++++.++|+... .+.+++..
T Consensus 7 ~~~~~~~~~g~~~~-~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R 79 (81)
T 2rcz_A 7 VKSRKNEEYGLRLA-SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMVVQR 79 (81)
T ss_dssp ECCSTTCCCCEEEE-EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHHTSTTEEEEEEEC
T ss_pred EECCCCCCCCEEEe-CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCCCeEEEEEEe
Confidence 44445579999987 55 799999999999999 9999999 9999999999999999998543 67777753
No 155
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.81 E-value=7.2e-09 Score=83.72 Aligned_cols=76 Identities=22% Similarity=0.357 Sum_probs=65.0
Q ss_pred CceEEEeecCCCCCCCeEEcCC----c-eEEEEcccchhhhhCC-CCCCEE--eecccccCCCHHHHHHHHhcc--CcEE
Q psy6995 248 PAQELTLKRNGLGQLGFHVQPD----G-LVTEVEHMGLAYQEGL-KQGCRL--ICKVAVSTLSHDQMVDLLKTS--SLVT 317 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~E----G-~Vt~VE~~g~Ae~AGL-R~G~RL--Icg~sV~~lsHeq~vdlLrts--~~V~ 317 (342)
+.+++.|.+....+|||.+... | +|..|.++++|++||| ++||+| |||++|.+++++++.++|+.. ..+.
T Consensus 8 ~~~~v~l~~~~~~glG~~~~~~~~~~~~~V~~V~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~ 87 (127)
T 1b8q_A 8 NVISVRLFKRKVGGLGFLVKERVSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHV 87 (127)
T ss_dssp CSEEEEEECTTTSCCSCCEEECTTSSCEEECCCSSSSSHHHHSSCCTTTCCCEETTEECSSSCHHHHHHHHHSCCSSCEE
T ss_pred ceEEEEEEeCCCCcEeEEEEecCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEE
Confidence 4678888887668999999643 3 7899999999999999 999999 999999999999999999863 3688
Q ss_pred EEEeCC
Q psy6995 318 VTVIPA 323 (342)
Q Consensus 318 v~VipP 323 (342)
|++...
T Consensus 88 l~v~R~ 93 (127)
T 1b8q_A 88 VLILRG 93 (127)
T ss_dssp EEEECC
T ss_pred EEEEeC
Confidence 877653
No 156
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=98.81 E-value=1.4e-08 Score=85.21 Aligned_cols=74 Identities=24% Similarity=0.333 Sum_probs=64.1
Q ss_pred CceEEEeecCCCCCCCeEEcCC--c-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhcc--CcEEEEE
Q psy6995 248 PAQELTLKRNGLGQLGFHVQPD--G-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTS--SLVTVTV 320 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~E--G-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts--~~V~v~V 320 (342)
+.+++.|.|...+.|||.++.. | +|.+|.++++|++|||++||+| |||++|.+.+|+....+++.. ..|+|++
T Consensus 4 ~~r~v~l~k~~~~~lG~~~~~~~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~~~v~l~v 83 (166)
T 1w9e_A 4 DPREVILCKDQDGKIGLRLKSIDNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQAFGEKITMTI 83 (166)
T ss_dssp CCEEEEEECCTTSCCSEEEEEETTEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSSEEEEEE
T ss_pred CCEEEEEEeCCCCcEeEEEEeCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEE
Confidence 5788999998878999999753 4 8999999999999999999999 999999999998888888743 3677777
Q ss_pred e
Q psy6995 321 I 321 (342)
Q Consensus 321 i 321 (342)
.
T Consensus 84 r 84 (166)
T 1w9e_A 84 R 84 (166)
T ss_dssp E
T ss_pred E
Confidence 3
No 157
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=98.78 E-value=9.6e-09 Score=87.30 Aligned_cols=68 Identities=31% Similarity=0.486 Sum_probs=57.9
Q ss_pred CCCCeEEcC-------------Cc-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhcc-CcEEEEEeC
Q psy6995 260 GQLGFHVQP-------------DG-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTS-SLVTVTVIP 322 (342)
Q Consensus 260 gqLGFhV~~-------------EG-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts-~~V~v~Vip 322 (342)
++|||.+.+ .| +|++|.++++|++ |||+||+| |||++|..++|++++.+|+.. ..|.|+|..
T Consensus 2 ~g~Gf~i~gg~~~~~~~~~~~~~g~~V~~v~~~spA~~-gl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r 80 (195)
T 2qbw_A 2 PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIVR 80 (195)
T ss_dssp CCSSEEEEECTTSCCCSSCTTCCSEEEEEECTTSTTTT-TCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEEEE
T ss_pred CcccEEEECCcCCCCCccccCCCCEEEEEECCCChHHh-CCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEE
Confidence 468999974 24 7999999999999 99999999 999999999999999999864 478888887
Q ss_pred CCCCCC
Q psy6995 323 ALSDGT 328 (342)
Q Consensus 323 P~~dg~ 328 (342)
...+|.
T Consensus 81 ~~~~G~ 86 (195)
T 2qbw_A 81 EVGNGA 86 (195)
T ss_dssp ECSSSC
T ss_pred cCCCCC
Confidence 544443
No 158
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.78 E-value=8.3e-09 Score=86.20 Aligned_cols=75 Identities=17% Similarity=0.237 Sum_probs=62.6
Q ss_pred CceEEEeecCCCCCCCeEEcC--Cc-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhcc---CcEEE
Q psy6995 248 PAQELTLKRNGLGQLGFHVQP--DG-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTS---SLVTV 318 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~--EG-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts---~~V~v 318 (342)
.+.++.|.+.. .+|||.+.. .+ +|..|.++|+|++|| |++||+| |||++|...+|++++++|+.. ..|.|
T Consensus 27 ~~~~~~l~k~~-~glG~~i~~~~~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~~~~~G~~v~l 105 (126)
T 1wif_A 27 KVIQTKLTVGN-LGLGLVVIQNGPYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQNITIGTVLQI 105 (126)
T ss_dssp CEEEEEEECCT-TCCCCCEEEETTEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTSCCSSCEEEE
T ss_pred ceEEEEEecCC-ceEeEEEEcCCCcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCEEEE
Confidence 56667777654 689998853 33 689999999999999 9999999 999999999999999999862 36888
Q ss_pred EEeCC
Q psy6995 319 TVIPA 323 (342)
Q Consensus 319 ~VipP 323 (342)
+|...
T Consensus 106 ~V~R~ 110 (126)
T 1wif_A 106 KAYRG 110 (126)
T ss_dssp EEESS
T ss_pred EEEEC
Confidence 88754
No 159
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=98.76 E-value=2.6e-08 Score=81.55 Aligned_cols=63 Identities=22% Similarity=0.328 Sum_probs=54.6
Q ss_pred CCCCeEEcC---Cc-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhc---cCcEEEEEeC
Q psy6995 260 GQLGFHVQP---DG-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKT---SSLVTVTVIP 322 (342)
Q Consensus 260 gqLGFhV~~---EG-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrt---s~~V~v~Vip 322 (342)
..|||.+.. .| +|..|.++++|++|||++||+| |||++|.+.+|++++.+|+. ...|.|+|..
T Consensus 39 ~~lG~~l~~~~~~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R 110 (124)
T 3tsv_A 39 DSVGLRLAGGNDVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQK 110 (124)
T ss_dssp SCCCEEEEECTTSCEEEEEECTTCHHHHTTCCTTEEEEEETTEECSSCCHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred CceeEEEecCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEE
Confidence 689999954 24 8999999999999999999999 99999999999999998873 2367887754
No 160
>1srq_A RAP1GAP, GTPase-activating protein 1; mixed alpha-beta, signaling protein; 2.90A {Homo sapiens} SCOP: e.55.1.1 PDB: 3brw_A*
Probab=98.70 E-value=7.7e-09 Score=99.84 Aligned_cols=40 Identities=35% Similarity=0.516 Sum_probs=35.6
Q ss_pred CCccccccccccCCCCceEEEEEEeeecccccccceeeEEEEEEec
Q psy6995 14 IPLEHQNWLGMDDNLGPVAISLKREKVEYTQESQQMYRYRLLIRTS 59 (342)
Q Consensus 14 ~~keHqN~fG~DE~LGPvavSi~rE~~e~~~~~~~~y~YRiiiRts 59 (342)
.+||||||+|+|++|||++|||++|+.+. ++.||+|+||.
T Consensus 21 ~gk~H~n~~g~d~~lGpvilSi~~e~~~~------~~~~r~ilRt~ 60 (341)
T 1srq_A 21 LGKEHFNYYSLDTALGHLVFSLKYDVIGD------QEHLRLLLRTK 60 (341)
T ss_dssp TTSSCEEEEEEETTTEEEEEEEEEEEETT------EEEEEEEEECS
T ss_pred CCCceeeEEEEcCCCCcEEEEEEEeccCC------ceeEEEEEEcC
Confidence 57899999999999999999999998872 36799999975
No 161
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.67 E-value=1.2e-07 Score=81.47 Aligned_cols=75 Identities=20% Similarity=0.390 Sum_probs=62.5
Q ss_pred ceEEEeecCCCCCCCeEEcC-------Cc-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhc-cCcE
Q psy6995 249 AQELTLKRNGLGQLGFHVQP-------DG-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKT-SSLV 316 (342)
Q Consensus 249 t~El~LrR~~~gqLGFhV~~-------EG-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrt-s~~V 316 (342)
...+.+.+.....|||.+.. .| +|++|.++++|++|| |++||+| |||++|.+++|+++.++|+. ...|
T Consensus 108 ~~~v~l~~~~~~~lG~~~~~~~~~~~~~gv~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v 187 (196)
T 1p1d_A 108 TFHVKLPKKHSVELGITISSPSSRKPGDPLVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDSCSMEDAVQILQQCEDLV 187 (196)
T ss_dssp CEEEEECCCSSCCCCCEEECSCSSSTTCCCEEEECCSSSHHHHTSCCCTTCEEEEETTEEGGGCCHHHHHHHHHHCTTCE
T ss_pred cEEEEecCCCCCCcCEEEECCCCCCCCCCEEEEEECCCCcHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEE
Confidence 34556666555789999953 34 899999999999999 9999999 99999999999999999986 4468
Q ss_pred EEEEeCC
Q psy6995 317 TVTVIPA 323 (342)
Q Consensus 317 ~v~VipP 323 (342)
.|+|...
T Consensus 188 ~l~v~R~ 194 (196)
T 1p1d_A 188 KLKIRKD 194 (196)
T ss_dssp EEEEECC
T ss_pred EEEEEeC
Confidence 8888654
No 162
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=98.66 E-value=2.4e-09 Score=102.88 Aligned_cols=73 Identities=30% Similarity=0.492 Sum_probs=0.0
Q ss_pred EEEeecC-CCCCCCeEEcCCceEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhccC-cEEEEEeCCC
Q psy6995 251 ELTLKRN-GLGQLGFHVQPDGLVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTSS-LVTVTVIPAL 324 (342)
Q Consensus 251 El~LrR~-~~gqLGFhV~~EG~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts~-~V~v~VipP~ 324 (342)
++++.++ ..++|||.+. .|+|..|.++|+|++||||+||+| |||++|...+|++++++|+.+. .|+|+|+|..
T Consensus 298 ~v~l~~~~~~~~lG~~i~-~g~I~~V~~gs~A~~aGL~~GD~Il~VNg~~v~~~s~~~~~~~l~~~~~~v~L~V~p~~ 374 (388)
T 3suz_A 298 TVLIKRPDLKYQLGFSVQ-NGIICSLMRGGIAERGGVRVGHRIIEINGQSVVATAHEKIVQALSNSVGEIHMKTMPAA 374 (388)
T ss_dssp ------------------------------------------------------------------------------
T ss_pred eeeEeecCCCCccceEEe-cCEEEEeecCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEecc
Confidence 3444443 4478999996 689999999999999999999999 9999999999999999999655 6888888754
No 163
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.66 E-value=4.4e-08 Score=88.16 Aligned_cols=72 Identities=21% Similarity=0.367 Sum_probs=61.2
Q ss_pred CceEEEeecCCCCCCCeEEcCC----c-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhccC-cE-EE
Q psy6995 248 PAQELTLKRNGLGQLGFHVQPD----G-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTSS-LV-TV 318 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~E----G-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts~-~V-~v 318 (342)
.++.++|.+.. ++|||.+..+ | +|..|.++++|++|||++||+| |||+.|..++|++++++|+... .| .|
T Consensus 9 ~~r~v~l~k~~-~glG~~l~~~~~~~gv~V~~V~~gSpA~~aGL~~GD~Il~VNG~~V~~~s~~dl~~~l~~~g~~v~~l 87 (216)
T 2krg_A 9 RPRLCTMKKGP-SGYGFNLHSDKSKPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLL 87 (216)
T ss_dssp CCEEEEEECCS-SSSCEEECCCSSSCSCBEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCTHHHHHHHHHHCSEEEEE
T ss_pred ceEEEEEEeCC-CCceEEEEecCCCCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCeEEEE
Confidence 46778888866 5799999755 3 8999999999999999999999 9999999999999999998533 56 44
Q ss_pred EE
Q psy6995 319 TV 320 (342)
Q Consensus 319 ~V 320 (342)
+|
T Consensus 88 ~V 89 (216)
T 2krg_A 88 VV 89 (216)
T ss_dssp EC
T ss_pred EE
Confidence 44
No 164
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=98.66 E-value=1.1e-07 Score=79.88 Aligned_cols=74 Identities=26% Similarity=0.479 Sum_probs=62.2
Q ss_pred CceEEEeecCCCCCCCeEEcCCceEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHh-ccCcEEEEEeC
Q psy6995 248 PAQELTLKRNGLGQLGFHVQPDGLVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLK-TSSLVTVTVIP 322 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~EG~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLr-ts~~V~v~Vip 322 (342)
+.+++++.++....|||.+. +|+|..|.++++|++|||++||+| |||+++.+.+|+++.-.++ ....+.+.+.|
T Consensus 88 ~~~~v~l~~~~~~~lG~~~~-~g~v~~v~~~s~a~~aGl~~GD~I~~ing~~v~~~~~~~v~~~v~r~g~~~~l~v~~ 164 (166)
T 1w9e_A 88 FERTITMHKDSTGHVGFIFK-NGKITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP 164 (166)
T ss_dssp TCEEEEEECCTTSCCSEEEE-TTEEEEECTTSHHHHTTCCSSEEEEEETTEECTTCCHHHHHHHHHHSCSEEEEEEEE
T ss_pred CcEEEEEecCCCCcEeEEEe-CCEEEEEccCCHHHHcCCCCCCEEEEECCEECCCCChHHHHHHHhhCCCEEEEEEEE
Confidence 45667776655688999997 789999999999999999999999 9999999999999887765 55566776655
No 165
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.65 E-value=3.9e-08 Score=79.64 Aligned_cols=75 Identities=23% Similarity=0.400 Sum_probs=61.4
Q ss_pred CceEEEeecCCC-CCCCeEEcC-------Cc-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhcc--
Q psy6995 248 PAQELTLKRNGL-GQLGFHVQP-------DG-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTS-- 313 (342)
Q Consensus 248 et~El~LrR~~~-gqLGFhV~~-------EG-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts-- 313 (342)
+..++.+.+.+. ..|||.+.. .| +|+.|.++++|++|| |++||+| |||+.|. +++++..+|+..
T Consensus 19 ~~~~~~~~~~~~~~~lG~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~--~~~~~~~~l~~~~g 96 (124)
T 1wh1_A 19 ELEEVDLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQ--NREEAVALLTSEEN 96 (124)
T ss_dssp EECCBCCCCSSTTCCCCEEEECCCCCSSCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCC--SHHHHHHHHTCSSC
T ss_pred eEEEEEEEecCCCCcccEEEEecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECC--CHHHHHHHHHhCCC
Confidence 455666777655 689999964 34 799999999999999 9999999 9999998 599999999864
Q ss_pred CcEEEEEeCCC
Q psy6995 314 SLVTVTVIPAL 324 (342)
Q Consensus 314 ~~V~v~VipP~ 324 (342)
..|.|+|....
T Consensus 97 ~~v~l~v~R~g 107 (124)
T 1wh1_A 97 KNFSLLIARPE 107 (124)
T ss_dssp CSCCEEEEECS
T ss_pred CEEEEEEEECC
Confidence 36888887653
No 166
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=98.61 E-value=8.2e-08 Score=92.87 Aligned_cols=73 Identities=19% Similarity=0.320 Sum_probs=61.4
Q ss_pred CceEEEeecCCCCCCCeEEcC---Cc-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhc--cC-cEEE
Q psy6995 248 PAQELTLKRNGLGQLGFHVQP---DG-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKT--SS-LVTV 318 (342)
Q Consensus 248 et~El~LrR~~~gqLGFhV~~---EG-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrt--s~-~V~v 318 (342)
+.+.+.+.+.+ +|||.+.. .| +|..|.++|+|++|||++||+| |||++|..++|++++.+|+. .. .|+|
T Consensus 9 ~~~~v~~~k~~--~lG~~i~gg~~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~e~~~~l~~~~~g~~v~l 86 (391)
T 3tsz_A 9 SMKLVKFRKGD--SVGLRLAGGNDVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTI 86 (391)
T ss_dssp CEEEEEEECCS--SCCEEEEEETTTEEEEEEECTTCHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEE
T ss_pred CcEEEEeecCC--ceeEEEEecCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhhcCCCeEEE
Confidence 45556666664 69999964 35 7999999999999999999999 99999999999999999984 33 6888
Q ss_pred EEeC
Q psy6995 319 TVIP 322 (342)
Q Consensus 319 ~Vip 322 (342)
+|..
T Consensus 87 ~v~r 90 (391)
T 3tsz_A 87 LAQK 90 (391)
T ss_dssp EEEE
T ss_pred EEee
Confidence 8864
No 167
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=98.60 E-value=7.5e-08 Score=98.96 Aligned_cols=76 Identities=28% Similarity=0.455 Sum_probs=65.8
Q ss_pred CCceEEEeecCCCCCCCeEEcC----------Cc-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhc
Q psy6995 247 SPAQELTLKRNGLGQLGFHVQP----------DG-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKT 312 (342)
Q Consensus 247 cet~El~LrR~~~gqLGFhV~~----------EG-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrt 312 (342)
++.+++.|.|.. ++|||.+.+ .| +|..|.++|+|++|| |+.||+| |||++|..++|++++.+|+.
T Consensus 58 ~~~~~v~l~k~~-~glGf~i~gg~~~~~~~~~~g~~V~~v~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 136 (721)
T 2xkx_A 58 MEYEEITLERGN-SGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKE 136 (721)
T ss_pred ceEEEEEEEeCC-CCCCEEEeCCcCCcccCCCCCeEEEEeCCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHhhc
Confidence 457888899987 699999964 23 899999999999999 9999999 99999999999999999985
Q ss_pred cC-cEEEEEeCC
Q psy6995 313 SS-LVTVTVIPA 323 (342)
Q Consensus 313 s~-~V~v~VipP 323 (342)
+. .|+|+|...
T Consensus 137 ~g~~v~l~v~R~ 148 (721)
T 2xkx_A 137 AGSIVRLYVMRR 148 (721)
T ss_pred cccccceEEEec
Confidence 44 678887644
No 168
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.54 E-value=2.3e-07 Score=75.78 Aligned_cols=67 Identities=21% Similarity=0.303 Sum_probs=56.0
Q ss_pred CCCCCCCeEEc--C------Cc-eEEEEcc--cchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhcc-CcEEEEEeC
Q psy6995 257 NGLGQLGFHVQ--P------DG-LVTEVEH--MGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTS-SLVTVTVIP 322 (342)
Q Consensus 257 ~~~gqLGFhV~--~------EG-~Vt~VE~--~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts-~~V~v~Vip 322 (342)
...+.+||.|. . .| +|..|.+ +++|++|||++||+| |||+.|.+.+|+++.++|+.. ..|.|+|..
T Consensus 24 ~~~g~~G~~v~l~~~~~~~~~gv~V~~V~~~~~spA~~aGL~~GD~Il~Vng~~v~~~~~~dl~~~l~~~g~~v~l~v~R 103 (118)
T 2yub_A 24 TTECRRGFSVTVESASSNYATTVQVKEVNRMHISPNNRNAIHPGDRILEINGTPVRTLRVEEVEDAIKQTSQTLQLLIEH 103 (118)
T ss_dssp CSSSSCSSEEEEECTTSSSCCEEEEEECCTTTSCTTHHHHCCTTCCEEEESSSBTTTSCHHHHHHHHHCCSSCEEEEEEE
T ss_pred ccCCCceEEEEeccccccCCCcEEEEEecCCCCChHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHHhCCCEEEEEEEE
Confidence 34467788763 2 24 7899999 999999999999999 999999999999999999864 478888875
Q ss_pred C
Q psy6995 323 A 323 (342)
Q Consensus 323 P 323 (342)
.
T Consensus 104 ~ 104 (118)
T 2yub_A 104 D 104 (118)
T ss_dssp C
T ss_pred C
Confidence 4
No 169
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.49 E-value=3.8e-07 Score=78.09 Aligned_cols=73 Identities=26% Similarity=0.367 Sum_probs=59.7
Q ss_pred ceEEEeecCCCCCCCeEEcC---------Cc-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhccC-
Q psy6995 249 AQELTLKRNGLGQLGFHVQP---------DG-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTSS- 314 (342)
Q Consensus 249 t~El~LrR~~~gqLGFhV~~---------EG-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts~- 314 (342)
+.++++.+. ...|||.+.. .| +|+.|.++++|++|| |++||+| |||++|..++|++++++|+...
T Consensus 107 ~~~v~l~~~-~~~lG~~l~~g~~~~~~~~~g~~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 185 (200)
T 2qt5_A 107 TVEVTLHKE-GNTFGFVIRGGAHDDRNKSRPVVITCVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQCGQ 185 (200)
T ss_dssp EEEEEEECB-TTBCSEEEEEECCSSTTTCEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTCS
T ss_pred EEEEEEecC-CCCeEEEEECCCCCCccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 455556543 3679999752 13 899999999999999 9999999 9999999999999999999743
Q ss_pred cEEEEEeC
Q psy6995 315 LVTVTVIP 322 (342)
Q Consensus 315 ~V~v~Vip 322 (342)
.|.|+|..
T Consensus 186 ~v~l~v~R 193 (200)
T 2qt5_A 186 EATLLIEY 193 (200)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEEE
Confidence 67777754
No 170
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=98.45 E-value=3e-07 Score=91.75 Aligned_cols=72 Identities=19% Similarity=0.322 Sum_probs=61.6
Q ss_pred ceEEEeecCCCCCCCeEEcC---Cc-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhc--c-CcEEEE
Q psy6995 249 AQELTLKRNGLGQLGFHVQP---DG-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKT--S-SLVTVT 319 (342)
Q Consensus 249 t~El~LrR~~~gqLGFhV~~---EG-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrt--s-~~V~v~ 319 (342)
++.+.|.+. .+|||.+.. .| ||..|.++|+|++|||++||+| |||++|..++|++++.+|+. . ..|+|+
T Consensus 2 ~r~V~l~k~--~~lG~~i~gg~~~Gi~V~~V~~gspA~~aGL~~GD~Il~VNG~~v~~~t~~e~~~~L~~~~~g~~v~L~ 79 (468)
T 3shw_A 2 MKLVKFRKG--DSVGLRLAGGNDVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTIL 79 (468)
T ss_dssp EEEEEEECC--SSCCEEEEEETTTEEEEEEECSSSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEEE
T ss_pred ceEEEEecC--CccceEEEccCcCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEE
Confidence 455667774 789999932 45 7999999999999999999999 99999999999999999986 2 368888
Q ss_pred EeC
Q psy6995 320 VIP 322 (342)
Q Consensus 320 Vip 322 (342)
|.+
T Consensus 80 V~r 82 (468)
T 3shw_A 80 AQK 82 (468)
T ss_dssp EEE
T ss_pred EEE
Confidence 876
No 171
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=98.44 E-value=3e-07 Score=94.59 Aligned_cols=75 Identities=25% Similarity=0.421 Sum_probs=62.1
Q ss_pred ceEEEeecCCCCCCCeEEcC----------Cc-eEEEEcccchhhhhC-CCCCCEE--eecccccCCCHHHHHHHHhcc-
Q psy6995 249 AQELTLKRNGLGQLGFHVQP----------DG-LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTS- 313 (342)
Q Consensus 249 t~El~LrR~~~gqLGFhV~~----------EG-~Vt~VE~~g~Ae~AG-LR~G~RL--Icg~sV~~lsHeq~vdlLrts- 313 (342)
+.+++|.+. ..+|||.+.. .| +|++|.++|+|++|| |++||+| |||++|.+.+|++++.+|+..
T Consensus 155 ~~~v~l~k~-~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~ 233 (721)
T 2xkx_A 155 VMEIKLIKG-PKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNTY 233 (721)
T ss_pred ceeeeeeee-cCCCceeeccCCCccccCCCCceEEEEeCCCCchhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHHcCC
Confidence 356667664 3569999853 24 899999999999999 9999999 999999999999999999854
Q ss_pred CcEEEEEeCCC
Q psy6995 314 SLVTVTVIPAL 324 (342)
Q Consensus 314 ~~V~v~VipP~ 324 (342)
..|.|+|..+.
T Consensus 234 ~~v~l~V~R~g 244 (721)
T 2xkx_A 234 DVVYLKVAKPS 244 (721)
T ss_pred CeEEEEEEeCC
Confidence 46888887643
No 172
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=97.98 E-value=1.2e-05 Score=63.46 Aligned_cols=52 Identities=23% Similarity=0.329 Sum_probs=44.5
Q ss_pred Cc-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhccCcEEEEEeC
Q psy6995 269 DG-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTSSLVTVTVIP 322 (342)
Q Consensus 269 EG-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts~~V~v~Vip 322 (342)
.| +|++|.++++|++|||++||.| |||+.+. +.+++..+|+....+.|++..
T Consensus 35 ~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~--~~~~~~~~l~~~~~v~l~v~R 89 (113)
T 2pzd_A 35 HGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQ--NAEDVYEAVRTQSQLAVQIRR 89 (113)
T ss_dssp SCEEEEEEBTTSHHHHHTCCTTCEEEEETTEECC--SHHHHHHHHHHCSSEEEEEEE
T ss_pred CCeEEEEeCCCChHHHcCCCCCCEEEEECCEECC--CHHHHHHHHhCCCeEEEEEEE
Confidence 44 6899999999999999999999 9999997 478999999876677777654
No 173
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=97.94 E-value=1.6e-05 Score=75.71 Aligned_cols=64 Identities=25% Similarity=0.286 Sum_probs=55.1
Q ss_pred CCCCeEEcCC-----c-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhcc--CcEEEEEeCC
Q psy6995 260 GQLGFHVQPD-----G-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTS--SLVTVTVIPA 323 (342)
Q Consensus 260 gqLGFhV~~E-----G-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts--~~V~v~VipP 323 (342)
+++|+.+..+ | +|..|.++++|++|||++||+| |||++|..++.+++..+|+.. ..|+|+|..+
T Consensus 85 ~giG~~~~~~~~~~~~~~V~~v~~~spA~~aGl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~r~ 158 (388)
T 1fc6_A 85 TGVGLEITYDGGSGKDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGMSLYDVSDLLQGEADSQVEVVLHAP 158 (388)
T ss_dssp BBCSEEEEECTTCSSCEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHCBSTTCEEEEEEEET
T ss_pred EEEEEEEEEeecCCCcEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEEEeC
Confidence 5789998632 3 8999999999999999999999 999999999999999999842 3688888764
No 174
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=97.88 E-value=2.7e-05 Score=61.45 Aligned_cols=52 Identities=17% Similarity=0.237 Sum_probs=43.4
Q ss_pred Cc-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhccCcEEEEEeC
Q psy6995 269 DG-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTSSLVTVTVIP 322 (342)
Q Consensus 269 EG-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts~~V~v~Vip 322 (342)
.| +|..|.++++|++|||++||+| |||+.+.+ .+++...|+....+.|++..
T Consensus 35 ~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~--~~~~~~~l~~g~~v~l~v~R 89 (112)
T 2p3w_A 35 SGIYVQEVAPNSPSQRGGIQDGDIIVKVNGRPLVD--SSELQEAVLTESPLLLEVRR 89 (112)
T ss_dssp SSEEEEEECTTSHHHHHTCCTTCEEEEETTEECCS--HHHHHHHHHHCSSEEEEEEE
T ss_pred CCeEEEEECCCChHHHCCCCCCCEEEEECCEECCC--HHHHHHHHhCCCeEEEEEEE
Confidence 45 6889999999999999999999 99999975 68888888765667777643
No 175
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=97.83 E-value=4.6e-05 Score=59.44 Aligned_cols=52 Identities=21% Similarity=0.237 Sum_probs=43.8
Q ss_pred eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhcc---CcEEEEEeCCC
Q psy6995 271 LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTS---SLVTVTVIPAL 324 (342)
Q Consensus 271 ~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts---~~V~v~VipP~ 324 (342)
+|.+|.++++|++|||++||+| |||+.|.+ .+++...|... ..|.++|....
T Consensus 5 ~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~--~~d~~~~l~~~~~~~~v~l~v~R~g 61 (95)
T 3id1_A 5 VVGEIAANSIAAEAQIAPGTELKAVDGIETPD--WDAVRLQLVDKIGDESTTITVAPFG 61 (95)
T ss_dssp BEEEECTTSHHHHTTCCTTCEEEEETTEECSS--HHHHHHHHHHTTTCSEEEEEEECTT
T ss_pred EEEeeCCCCHHHHcCCCCCCEEEEECCEECCC--HHHHHHHHHHhcCCCcEEEEEEECC
Confidence 7899999999999999999999 99999975 57888888643 36888887643
No 176
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=97.82 E-value=1.8e-05 Score=59.79 Aligned_cols=48 Identities=17% Similarity=0.300 Sum_probs=40.0
Q ss_pred eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhcc--CcEEEEE
Q psy6995 271 LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTS--SLVTVTV 320 (342)
Q Consensus 271 ~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts--~~V~v~V 320 (342)
+|.+|.++++|++|||++||+| |||+.+.+ .+++..+|+.. ..+.+++
T Consensus 7 ~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v 58 (91)
T 2zpm_A 7 VLENVQPNSAASXAGLQAGDRIVXVDGQPLTQ--WVTFVMLVRDNPGXSLALEI 58 (91)
T ss_dssp BCSEECTTSHHHHTTCCTTCEEEEETTEECCC--HHHHHHHHHHCTTCCEEEEE
T ss_pred EEEEECCCChHHhcCCCCCCEEEEECCeEcCC--HHHHHHHHhcCCCCeEEEEE
Confidence 6889999999999999999999 99999974 67888888753 2556555
No 177
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=97.77 E-value=6.4e-05 Score=73.65 Aligned_cols=50 Identities=14% Similarity=0.230 Sum_probs=43.5
Q ss_pred eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhccC-cEEEEEeC
Q psy6995 271 LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTSS-LVTVTVIP 322 (342)
Q Consensus 271 ~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts~-~V~v~Vip 322 (342)
+|++|.++++|++||||+||+| |||++|.+ .+++.++|+... .+.|+|..
T Consensus 389 ~V~~V~~gspA~~aGL~~GD~I~~Vng~~v~~--~~~~~~~l~~~~~~v~l~v~R 441 (451)
T 3pv2_A 389 QVVGASENSAGWRAGIRPGDIIISANKKPVTD--VKSLQTIAQEKKKELLVQVLR 441 (451)
T ss_dssp EEEEECTTSHHHHHTCCTTCEEEEETTEECCS--HHHHHHHTTSSCSCEEEEEEE
T ss_pred EEEEECCCCHHHHcCCCCCCEEEEECCEECCC--HHHHHHHHhcCCCeEEEEEEE
Confidence 8999999999999999999999 99999975 589999998643 67777754
No 178
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=97.63 E-value=7.1e-05 Score=58.46 Aligned_cols=53 Identities=23% Similarity=0.245 Sum_probs=41.3
Q ss_pred EcCCc-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhcc---CcEEEEEe
Q psy6995 266 VQPDG-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTS---SLVTVTVI 321 (342)
Q Consensus 266 V~~EG-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts---~~V~v~Vi 321 (342)
++.+| +|.+|.++++|++ ||++||+| |||+.|.+ .+++.++|... ..|.|++.
T Consensus 4 ~~~~Gv~V~~V~~~spA~~-GL~~GD~I~~Ing~~v~~--~~dl~~~l~~~~~g~~v~l~v~ 62 (100)
T 3i18_A 4 VTYDGVYVMSVKDDVPAAD-VLHAGDLITEIDGNAFKS--SQEFIDYIHSKKVGDTVKINYK 62 (100)
T ss_dssp CCCCCEEEEEECTTSGGGG-TCCTTCEEEEETTBCCSS--HHHHHHHHHTSCTTCEEEEEEE
T ss_pred EeCCCEEEEEeCCCCchHH-CCCCCCEEEEECCEECCC--HHHHHHHHHhCCCCCEEEEEEE
Confidence 44567 7889999999995 99999999 99999975 47788888642 34665553
No 179
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=97.62 E-value=5.1e-05 Score=77.29 Aligned_cols=59 Identities=22% Similarity=0.326 Sum_probs=46.6
Q ss_pred CCCCeEEcCCc---eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhc---cCcEEEEEe
Q psy6995 260 GQLGFHVQPDG---LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKT---SSLVTVTVI 321 (342)
Q Consensus 260 gqLGFhV~~EG---~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrt---s~~V~v~Vi 321 (342)
..||+.+..++ +|++|.++|+|++|||++||.| |||+.|. .+++.++|+. ...|+|+|.
T Consensus 485 ~~lG~~~~~~~~gv~V~~V~~~spA~~AGL~~GD~I~aInG~~v~---~~~l~~~l~~~~~g~~v~l~v~ 551 (597)
T 4fgm_A 485 VNFGAKYKASPQGLDVLNVYHDESAYHAGLSAGDKIIAIDHLQAT---EQSVKRILERYIPGDTVTIHAF 551 (597)
T ss_dssp CCCSEEEEEETTEEEEEEECTTSHHHHHTCCTTCEEEEETTEECC---TTTHHHHHTTCCTTCEEEEEEE
T ss_pred cccceEEeccCCeEEEEEeCCCChHHHCCCCCCCEEEEECCEECC---HHHHHHHHHhcCCCCEEEEEEE
Confidence 58999987665 8999999999999999999999 9999994 3556666643 335666553
No 180
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=97.59 E-value=0.00014 Score=63.74 Aligned_cols=77 Identities=21% Similarity=0.192 Sum_probs=53.5
Q ss_pred CCCCCeEEcC--------Cc-eEEEEcccchhhhhCCCC-CCEE--eecccccCCCHHHHHHHHhcc--CcEEEEEe---
Q psy6995 259 LGQLGFHVQP--------DG-LVTEVEHMGLAYQEGLKQ-GCRL--ICKVAVSTLSHDQMVDLLKTS--SLVTVTVI--- 321 (342)
Q Consensus 259 ~gqLGFhV~~--------EG-~Vt~VE~~g~Ae~AGLR~-G~RL--Icg~sV~~lsHeq~vdlLrts--~~V~v~Vi--- 321 (342)
.+.||+.++. .| +|++|.++++|++|||++ ||+| |||+ | .+.+++.+.|+.. ..|.|+|.
T Consensus 94 ~~~lGi~~~~~~~~~~~~~Gv~V~~V~~~spA~~aGl~~~GD~I~~ing~-v--~~~~~l~~~l~~~~g~~v~l~v~r~~ 170 (209)
T 3rle_A 94 QGLLGVSIRFCSFDGANENVWHVLEVESNSPAALAGLRPHSDYIIGADTV-M--NESEDLFSLIETHEAKPLKLYVYNTD 170 (209)
T ss_dssp SSSSCEEEEEEECTTGGGSCEEEEEECTTSHHHHHTCCTTTEEEEEESSC-C--CSSSCHHHHHHHTTTSCEEEEEEETT
T ss_pred cCccceEEeecChhHccccceEEEEeCCCChHHHCCCCCCCCEEEECCCE-e--CCHHHHHHHHHhCCCCeEEEEEEECC
Confidence 4678998862 34 799999999999999999 9999 9997 4 4556777777642 23444432
Q ss_pred ---------CCCC--CCCCCcCCCcccc
Q psy6995 322 ---------PALS--DGTPRRYADLKMW 338 (342)
Q Consensus 322 ---------pP~~--dg~PRRgc~~~~~ 338 (342)
.|.. .|..+-||...++
T Consensus 171 ~~~~~~v~l~p~~~~~g~g~lG~~~~~g 198 (209)
T 3rle_A 171 TDNCREVIITPNSAWGGEGSLGCGIGYG 198 (209)
T ss_dssp TTEEEEEEECCCTTSSSSSSSCEEEECS
T ss_pred ceEEEEEEEEecCCCCCceeeeEEecCc
Confidence 2332 2456667766554
No 181
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=97.57 E-value=0.00019 Score=66.31 Aligned_cols=90 Identities=16% Similarity=0.129 Sum_probs=61.5
Q ss_pred hhhHHHHHHhhhc---cCCCCCceEEE-eecCCCCCCCeEEcCCc-eEEEEcccchhhhhCCCCCCEE--eecccccCCC
Q psy6995 230 RDELMEVVVRLRA---ATPGSPAQELT-LKRNGLGQLGFHVQPDG-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLS 302 (342)
Q Consensus 230 ~edl~EIV~RL~~---VT~Gcet~El~-LrR~~~gqLGFhV~~EG-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~ls 302 (342)
.+.+++++..|.. +.++.--..+. +.-.-...||.... +| +|.+|.++++|++||||+||+| |||+.|.+
T Consensus 202 ~~~i~~~l~~l~~~g~~~~~~lGi~~~~~~~~~~~~~g~~~~-~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~-- 278 (318)
T 1te0_A 202 FQLATKIMDKLIRDGRVIRGYIGIGGREIAPLHAQGGGIDQL-QGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAIS-- 278 (318)
T ss_dssp HHHHHHHHHHHHHHSSCCCEECCEEEEECSCCCSSSSCSSSC-CCEEEEEECTTSTTTTTCCCTTCCEEEETTEECCC--
T ss_pred HHHHHHHHHHHHHcCCcccccceeEeeecchhHHHhccCCCC-CcEEEEEeCCCChHHHCCCCCCCEEEEECCEEcCC--
Confidence 3678888888753 33332222222 11112244554433 45 7899999999999999999999 99999975
Q ss_pred HHHHHHHHhc---cCcEEEEEeC
Q psy6995 303 HDQMVDLLKT---SSLVTVTVIP 322 (342)
Q Consensus 303 Heq~vdlLrt---s~~V~v~Vip 322 (342)
.+++.++|+. ...|+|++..
T Consensus 279 ~~~l~~~l~~~~~g~~v~l~v~R 301 (318)
T 1te0_A 279 ALETMDQVAEIRPGSVIPVVVMR 301 (318)
T ss_dssp HHHHHHHHHTSCTTCEEEEEEES
T ss_pred HHHHHHHHHhcCCCCEEEEEEEE
Confidence 5788888875 2368888875
No 182
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=97.51 E-value=0.0004 Score=67.48 Aligned_cols=50 Identities=20% Similarity=0.299 Sum_probs=43.5
Q ss_pred eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhccC-cEEEEEeC
Q psy6995 271 LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTSS-LVTVTVIP 322 (342)
Q Consensus 271 ~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts~-~V~v~Vip 322 (342)
+|.+|.++++|++||||+||+| |||++|. +.+++.++|+... .+.|+|..
T Consensus 366 ~V~~V~~~spA~~aGL~~GD~I~~vng~~v~--~~~~~~~~l~~~~~~v~l~v~R 418 (436)
T 4a8c_A 366 KIDEVVKGSPAAQAGLQKDDVIIGVNRDRVN--SIAEMRKVLAAKPAIIALQIVR 418 (436)
T ss_pred EEEEeCCCCHHHHcCCCCCCEEEEECCEECC--CHHHHHHHHHhCCCeEEEEEEE
Confidence 7999999999999999999999 9999997 5699999998644 57777754
No 183
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=97.50 E-value=6.9e-05 Score=57.01 Aligned_cols=50 Identities=18% Similarity=0.167 Sum_probs=39.7
Q ss_pred eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhc---cCcEEEEEeC
Q psy6995 271 LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKT---SSLVTVTVIP 322 (342)
Q Consensus 271 ~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrt---s~~V~v~Vip 322 (342)
.|..+.+.++|++|||++||.| |||+.|.+ .+++.+++.. ...+.+++..
T Consensus 22 ~V~~~~~~s~A~~aGl~~GD~I~~ing~~v~~--~~d~~~~~~~~~~g~~v~l~v~R 76 (87)
T 2i6v_A 22 RVSPGKDPVLFESIGLQDGDMAVALNGLDLTD--PNVMNTLFQSMNEMTEMSLTVER 76 (87)
T ss_dssp EEEECSCHHHHHHTTCCTTCEEEEETTEETTC--HHHHHHHHHTGGGCSEEEEEEEE
T ss_pred EEEeCCCCCHHHHCCCCCCCEEEEECCEECCC--HHHHHHHHHhcCCCCEEEEEEEE
Confidence 3778888889999999999999 99999975 4666666653 3468888754
No 184
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=97.46 E-value=0.00013 Score=60.09 Aligned_cols=51 Identities=14% Similarity=0.149 Sum_probs=42.3
Q ss_pred Cc-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhcc---CcEEEEEeC
Q psy6995 269 DG-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTS---SLVTVTVIP 322 (342)
Q Consensus 269 EG-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts---~~V~v~Vip 322 (342)
.| +|.+|.++++|+ |||++||+| |||+.|.+ .+++..+|+.. ..|+|++..
T Consensus 57 ~g~~V~~V~~~spA~-aGL~~GD~I~~inG~~v~~--~~~l~~~l~~~~~g~~v~l~v~R 113 (134)
T 2l97_A 57 SGVIVRSVQSNMPAN-GHLEKYDVITKVDDKEIAS--STDLQSALYNHSIGDTIKITYYR 113 (134)
T ss_dssp SCEEEEECSTTSGGG-TTSCSSCEEEEETTEECCC--HHHHHHHHHHSSTTCEEEEEEEE
T ss_pred CCEEEEEECCCCchH-HCCCCCCEEEEECCEEcCC--HHHHHHHHHhCCCCCEEEEEEEE
Confidence 45 689999999999 999999999 99999976 46788888743 368888764
No 185
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=97.43 E-value=0.00022 Score=56.07 Aligned_cols=49 Identities=18% Similarity=0.157 Sum_probs=37.7
Q ss_pred EEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHh---ccCcEEEEEeC
Q psy6995 272 VTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLK---TSSLVTVTVIP 322 (342)
Q Consensus 272 Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLr---ts~~V~v~Vip 322 (342)
|..+.+.++|++|||++||+| |||+.|.+.. ++.+++. ....+.|++..
T Consensus 41 V~~~~pas~A~~aGl~~GDvI~~ing~~v~~~~--d~~~~~~~~~~g~~v~l~v~R 94 (105)
T 2i4s_A 41 VSPGKDPVLFESIGLQDGDMAVALNGLDLTDPN--VMNTLFQSMNEMTEMSLTVER 94 (105)
T ss_dssp EEECSCTHHHHHHTCCTTCEEEEETTEETTSTT--HHHHHHHHHTTCSEEEEEEEE
T ss_pred EecCCCCCHHHHcCCCCCCEEEEECCEECCCHH--HHHHHHHhcCCCCeEEEEEEE
Confidence 667777778899999999999 9999998764 4445554 34478888754
No 186
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=97.42 E-value=8e-05 Score=58.01 Aligned_cols=48 Identities=13% Similarity=0.168 Sum_probs=39.9
Q ss_pred eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhcc---CcEEEEEe
Q psy6995 271 LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTS---SLVTVTVI 321 (342)
Q Consensus 271 ~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts---~~V~v~Vi 321 (342)
+|..|.++++|++ ||++||+| |||++|.+ .+++..+|+.. ..|.|++.
T Consensus 4 ~V~~V~~~spA~~-GL~~GD~I~~InG~~v~~--~~~l~~~l~~~~~g~~v~l~v~ 56 (91)
T 2kjp_A 4 YASSVVENMPAKG-KIEVGDKIISADGKNYQS--AEKLIDYISSKKAGDKVTLKIE 56 (91)
T ss_dssp SCCCCCCSSCCSS-CCCSSCEEEEETTBCCSS--HHHHHHHHSSCCSSCEECEEEE
T ss_pred EEEEECCCChHHH-cCCCCCEEEEECCEECCC--HHHHHHHHHcCCCCCEEEEEEE
Confidence 5788999999999 99999999 99999975 57999999754 25666654
No 187
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=97.38 E-value=0.00016 Score=68.38 Aligned_cols=89 Identities=16% Similarity=0.175 Sum_probs=59.4
Q ss_pred hhHHHHHHhhhc---cCCCCCceEEE-eecCCCCCCCeEEcCCc-eEEEEcccchhhhhCCCCCCEE--eecccccCCCH
Q psy6995 231 DELMEVVVRLRA---ATPGSPAQELT-LKRNGLGQLGFHVQPDG-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSH 303 (342)
Q Consensus 231 edl~EIV~RL~~---VT~Gcet~El~-LrR~~~gqLGFhV~~EG-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsH 303 (342)
+.+++++..|.- +.+|.--..+. +.-.-...||... ..| +|.+|.++++|++||||+||.| |||+.|. +.
T Consensus 222 ~~~~~~~~~l~~~g~v~~~~lGv~~~~~~~~~a~~~gl~~-~~G~~V~~V~~~spA~~aGL~~GDvI~~ing~~v~--~~ 298 (345)
T 3stj_A 222 NMARTLAQQLIDFGEIKRGLLGIKGTEMSADIAKAFNLDV-QRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLN--SF 298 (345)
T ss_dssp HHHHHHHHHHHHHSSCCCEECCEEEEECCHHHHHHTTCSC-CSSEEEEEECTTSHHHHHTCCTTCEECEETTEECS--CH
T ss_pred HHHHHHHHHHHhcccccccccceeeEeecHHHHHhcCCCC-CceEEEEEeccCChHHHcCCCCCCEEEEECCEECC--CH
Confidence 667888888763 33333222221 1111112333332 245 8999999999999999999999 9999997 57
Q ss_pred HHHHHHHhcc---CcEEEEEeC
Q psy6995 304 DQMVDLLKTS---SLVTVTVIP 322 (342)
Q Consensus 304 eq~vdlLrts---~~V~v~Vip 322 (342)
+++..+|+.. .+|+|+|..
T Consensus 299 ~~l~~~l~~~~~g~~v~l~v~R 320 (345)
T 3stj_A 299 AELRSRIATTEPGTKVKLGLLR 320 (345)
T ss_dssp HHHHHHHHTSCTTCEEEEEEEE
T ss_pred HHHHHHHHhcCCCCEEEEEEEE
Confidence 7888888742 368887765
No 188
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=97.37 E-value=0.00024 Score=62.23 Aligned_cols=51 Identities=20% Similarity=0.148 Sum_probs=39.8
Q ss_pred eEEEEcccchhhhhCCCCC-CEE--eecccccCCCHHHHHHHHhc--cCcEEEEEeC
Q psy6995 271 LVTEVEHMGLAYQEGLKQG-CRL--ICKVAVSTLSHDQMVDLLKT--SSLVTVTVIP 322 (342)
Q Consensus 271 ~Vt~VE~~g~Ae~AGLR~G-~RL--Icg~sV~~lsHeq~vdlLrt--s~~V~v~Vip 322 (342)
+|.+|.++++|++|||++| |+| |||+.|.+.++-.. .+++. ...|+|+|..
T Consensus 19 ~V~~V~~~SpA~~AGL~~G~D~I~~ing~~v~~~~~~~~-~~~~~~~g~~v~l~v~R 74 (209)
T 3rle_A 19 HVLRVQENSPGHRAGLEPFFDFIVSINGSRLNKDNDTLK-DLLKANVEKPVKMLIYS 74 (209)
T ss_dssp EEEEECTTSHHHHTTCCTTTEEEEEETTEECCSSSSHHH-HHHHHTTTSCEEEEEEE
T ss_pred EEEEECCCCHHHHCCCCcCCeEEEEECCEECcCHHHHHH-HHHhcCCCCEEEEEEEe
Confidence 8999999999999999999 999 99999998876443 33332 3356666654
No 189
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=97.35 E-value=0.00028 Score=65.12 Aligned_cols=81 Identities=21% Similarity=0.321 Sum_probs=59.9
Q ss_pred hhhHHHHHHhhhccCCCCCceEEEeecCCCCCCCeEEcC----Cc-eEEEEcccchhhhhCCCCCCEE--eecccccCCC
Q psy6995 230 RDELMEVVVRLRAATPGSPAQELTLKRNGLGQLGFHVQP----DG-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLS 302 (342)
Q Consensus 230 ~edl~EIV~RL~~VT~Gcet~El~LrR~~~gqLGFhV~~----EG-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~ls 302 (342)
.+.+++++..|.. .|.. ....||+.++. +| +|.+|.++++|++||||+||+| |||+.|.+
T Consensus 210 ~~~v~~~l~~l~~--~g~~---------~~~~lGi~~~~~~~~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~-- 276 (324)
T 1y8t_A 210 VDQAKRIADELIS--TGKA---------SHASLGVQVTNDKDTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINS-- 276 (324)
T ss_dssp HHHHHHHHHHHHH--HSCC---------CCEECCEEEESCSSSSSEEEEEECTTSTTTTTTCCTTCEEEEETTEECCS--
T ss_pred HHHHHHHHHHHHH--cCCc---------cccccceEeeeccCCCceEEEEECCCChHHHcCCCCCCEEEEECCEECCC--
Confidence 3667777777653 2221 12467777753 35 7899999999999999999999 99999975
Q ss_pred HHHHHHHHhc---cCcEEEEEeCC
Q psy6995 303 HDQMVDLLKT---SSLVTVTVIPA 323 (342)
Q Consensus 303 Heq~vdlLrt---s~~V~v~VipP 323 (342)
.+++..+|+. ...|+|+|..+
T Consensus 277 ~~~l~~~l~~~~~g~~v~l~v~R~ 300 (324)
T 1y8t_A 277 ADALVAAVRSKAPGATVALTFQDP 300 (324)
T ss_dssp HHHHHHHHHTSCTTCEEEEEEECS
T ss_pred HHHHHHHHHhcCCCCEEEEEEEEC
Confidence 4678888864 24688888764
No 190
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=97.34 E-value=0.00026 Score=65.84 Aligned_cols=52 Identities=23% Similarity=0.326 Sum_probs=45.8
Q ss_pred Cc-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhccCcEEEEEeC
Q psy6995 269 DG-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTSSLVTVTVIP 322 (342)
Q Consensus 269 EG-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts~~V~v~Vip 322 (342)
.| +|.+|+++++|++||||+||.| |||+.|.+ .+++.+.|+....|.|++..
T Consensus 256 ~gv~V~~V~~~spA~~aGl~~GDvI~~ing~~v~~--~~~l~~~l~~~~~v~l~v~R 310 (325)
T 1lcy_A 256 HGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQN--AEDVYEAVRTQSQLAVQIRR 310 (325)
T ss_dssp SCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCS--HHHHHHHHTTCSSEEEEEEE
T ss_pred CCeEEEEeCcCChHHHCCCCCCCEEEEECCEEcCC--HHHHHHHHhCCCeEEEEEEE
Confidence 46 7899999999999999999999 99999974 68999999876788888765
No 191
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=97.33 E-value=6.9e-05 Score=73.39 Aligned_cols=59 Identities=22% Similarity=0.307 Sum_probs=0.0
Q ss_pred CCeEEc----CCc-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhccC-cEEEEEeC
Q psy6995 262 LGFHVQ----PDG-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTSS-LVTVTVIP 322 (342)
Q Consensus 262 LGFhV~----~EG-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts~-~V~v~Vip 322 (342)
+||.++ ..| +|++|.++++|++||||+||+| |||+.|. +++++.++|+... .|.|+|..
T Consensus 372 ~G~~l~~~~~~~gv~V~~V~~gspA~~aGL~~GDiI~~vng~~v~--~~~~l~~~l~~~~~~v~l~v~R 438 (448)
T 1ky9_A 372 EGAEMSNKGKDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVK--NIAELRKVLDSKPSVLALNIQR 438 (448)
T ss_dssp ---------------------------------------------------------------------
T ss_pred cceEeeccCCCCeEEEEEecCCCHHHHcCCCCCCEEEEECCEECC--CHHHHHHHHHcCCCeEEEEEEE
Confidence 477774 234 7899999999999999999999 9999998 5789999998543 56666654
No 192
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=97.31 E-value=0.00012 Score=71.45 Aligned_cols=52 Identities=19% Similarity=0.218 Sum_probs=43.4
Q ss_pred eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhcc-CcEEEEEeCCCC
Q psy6995 271 LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTS-SLVTVTVIPALS 325 (342)
Q Consensus 271 ~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts-~~V~v~VipP~~ 325 (342)
+|..|.++++|++|||++||+| |||++|...+ +.++|+.. ..|+|++....+
T Consensus 93 ~V~~V~~gsPA~~AGL~~GD~I~~InG~~v~~~~---~~~~l~~~g~~v~l~v~R~g~ 147 (403)
T 3k50_A 93 LISYVVPGSPAEEAGLQRGHWIMMMNGDYITKKV---ESELLQGSTRQLQIGVYKEVV 147 (403)
T ss_dssp EEEEECTTSHHHHTTCCTTCEEEEETTBCBCTTT---GGGGTSCSCEEEEEEEEEEEC
T ss_pred EEEEeCCCChHHHcCCCCCCEEEEECCEEccchh---HHHHhhCCCCEEEEEEEeCCc
Confidence 6999999999999999999999 9999999885 56677652 268888876644
No 193
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=97.30 E-value=0.00022 Score=69.93 Aligned_cols=91 Identities=20% Similarity=0.204 Sum_probs=59.9
Q ss_pred hhhHHHHHHhhhc---cCCCCCceEEE-eecCCCCCCCeEEcCCc-eEEEEcccchhhhhCCCCCCEE--eecccccCCC
Q psy6995 230 RDELMEVVVRLRA---ATPGSPAQELT-LKRNGLGQLGFHVQPDG-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLS 302 (342)
Q Consensus 230 ~edl~EIV~RL~~---VT~Gcet~El~-LrR~~~gqLGFhV~~EG-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~ls 302 (342)
.+.+++++..|.- |.+|.--.++. +...-...+|.....+| +|.+|.++++|++||||+||+| |||+.|.+.
T Consensus 239 ~~~~~~~~~~l~~~g~v~r~~lGv~~~~~~~~~a~~~gl~~~~~G~~V~~V~~~spA~~aGL~~GDvI~~vnG~~v~~~- 317 (451)
T 3pv2_A 239 INMVKDVAQQIIKFGSIHRGLMGIFVQHLTPELAQAMGYPEDFQGALVSQVNPNSPAELAGLKAGDIITQINDTKITQA- 317 (451)
T ss_dssp HHHHHHHHHHHHHHSSCCCCBCCEEEEECCHHHHHHTTSCTTCCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSH-
T ss_pred hHHHHHHHHHHHhcCCcccccccceEEeccHHHHHhcCCCcCCceEEEEecCCCChHHHcCCCCCCEEEEECCEEcCCH-
Confidence 3678888888863 44444333332 11111123333322145 8999999999999999999999 999999764
Q ss_pred HHHHHHHHhc---cCcEEEEEeC
Q psy6995 303 HDQMVDLLKT---SSLVTVTVIP 322 (342)
Q Consensus 303 Heq~vdlLrt---s~~V~v~Vip 322 (342)
+++...|.. ..+|+|+|..
T Consensus 318 -~~l~~~l~~~~~g~~v~l~V~R 339 (451)
T 3pv2_A 318 -TQVKTTISLLRVGSTVKIIVER 339 (451)
T ss_dssp -HHHHHHHHTSCTTCEEEEEEEE
T ss_pred -HHHHHHHHhcCCCCEEEEEEEE
Confidence 667777763 2367777764
No 194
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=97.28 E-value=0.00012 Score=56.75 Aligned_cols=48 Identities=29% Similarity=0.288 Sum_probs=39.0
Q ss_pred eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhcc---CcEEEEEe
Q psy6995 271 LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTS---SLVTVTVI 321 (342)
Q Consensus 271 ~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts---~~V~v~Vi 321 (342)
+|.+|.++++|++ ||++||+| |||+++.+ .+++.++|+.. ..|.|++.
T Consensus 8 ~V~~V~~~spA~~-GL~~GD~Il~InG~~v~~--~~~l~~~l~~~~~g~~v~l~v~ 60 (94)
T 2kl1_A 8 YVMSVLPNMPAAG-RLEAGDRIAAIDGQPINT--SEQIVSYVREKQAGDRVRVTFI 60 (94)
T ss_dssp ECCCCCTTSTTBT-TBCTTCEEEEETTBCCCC--HHHHHHHHHHSCTTCCEEEEEE
T ss_pred EEEEECCCChHHh-CCCCCCEEEEECCEECCC--HHHHHHHHHhCCCCCEEEEEEE
Confidence 6788999999999 99999999 99999975 57888888743 24555553
No 195
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=97.20 E-value=5.3e-05 Score=70.47 Aligned_cols=52 Identities=27% Similarity=0.285 Sum_probs=0.0
Q ss_pred Cc-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhccCcEEEEEeC
Q psy6995 269 DG-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTSSLVTVTVIP 322 (342)
Q Consensus 269 EG-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts~~V~v~Vip 322 (342)
.| +|.+|.++++|++|||++||+| |||+.|. +.+++.++|+....|+|+|..
T Consensus 254 ~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~--~~~~~~~~l~~~~~v~l~v~R 308 (332)
T 3num_A 254 SGAYIIEVIPDTPAEAGGLKENDVIISINGQSVV--SANDVSDVIKRESTLNMVVRR 308 (332)
T ss_dssp ---------------------------------------------------------
T ss_pred CceEEEEeccCCChHHcCCCCCCEEEEECCEECC--CHHHHHHHHhCCCeEEEEEEE
Confidence 45 7899999999999999999999 9999995 567788888765567777665
No 196
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=97.10 E-value=0.00051 Score=66.69 Aligned_cols=51 Identities=18% Similarity=0.283 Sum_probs=40.4
Q ss_pred Cc-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhc---cCcEEEEEe
Q psy6995 269 DG-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKT---SSLVTVTVI 321 (342)
Q Consensus 269 EG-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrt---s~~V~v~Vi 321 (342)
.| +|.+|.++++|++||||+||+| |||+.|.+. +++...|.. ...|+|+|.
T Consensus 263 ~G~~V~~V~~~spA~~aGL~~GD~I~~vnG~~v~~~--~~l~~~l~~~~~g~~v~l~v~ 319 (436)
T 4a8c_A 263 RGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSF--AELRSRIATTEPGTKVKLGLL 319 (436)
T ss_pred cceEEEEECCCChHHHCCCCCCCEEEEECCEECCCH--HHHHHHHHhcCCCCEEEEEEE
Confidence 45 8999999999999999999999 999999865 556666652 235666654
No 197
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=97.05 E-value=0.0012 Score=62.03 Aligned_cols=86 Identities=26% Similarity=0.294 Sum_probs=58.2
Q ss_pred hhhHHHHHHhhhc---cCCCCCceEEEeecCCCCCCCeEEcCCc-eEEEEcccchhhhhCCCC-----------CCEE--
Q psy6995 230 RDELMEVVVRLRA---ATPGSPAQELTLKRNGLGQLGFHVQPDG-LVTEVEHMGLAYQEGLKQ-----------GCRL-- 292 (342)
Q Consensus 230 ~edl~EIV~RL~~---VT~Gcet~El~LrR~~~gqLGFhV~~EG-~Vt~VE~~g~Ae~AGLR~-----------G~RL-- 292 (342)
.+.+++++..|.- ++++.--..+.- -....++|. +| +|.+|.++++|++||||+ ||.|
T Consensus 214 ~~~~~~~~~~l~~~g~~~~~~lGi~~~~-~~~~~~~~~----~Gv~V~~V~~~spA~~AGl~~~~~~~~~~l~~GDvI~~ 288 (348)
T 3qo6_A 214 VDTVGGIVDQLVRFGKVTRPILGIKFAP-DQSVEQLGV----SGVLVLDAPPSGPAGKAGLQSTKRDGYGRLVLGDIITS 288 (348)
T ss_dssp HHHHHHHHHHHHHHSSCCCEECCCEECC-TTTTTTTTC----SSEEEEECCSSSHHHHHTCCCCEECSSSCEECCCEECE
T ss_pred ecchHHHHHHHHhCCceeeeecCcEEcc-chhhhhcCC----ceEEEEEecCCChHHHcCCccccccccCCCCCCCEEEE
Confidence 3678888888753 333221111110 011123442 46 788999999999999999 9999
Q ss_pred eecccccCCCHHHHHHHHhc---cCcEEEEEeC
Q psy6995 293 ICKVAVSTLSHDQMVDLLKT---SSLVTVTVIP 322 (342)
Q Consensus 293 Icg~sV~~lsHeq~vdlLrt---s~~V~v~Vip 322 (342)
|||+.|.+. +++.+.|.. ...|+|+|..
T Consensus 289 ing~~v~~~--~dl~~~l~~~~~g~~v~l~v~R 319 (348)
T 3qo6_A 289 VNGTKVSNG--SDLYRILDQCKVGDEVTVEVLR 319 (348)
T ss_dssp ETTBCCSSS--HHHHHHHTTCCTTCEEEEEEEC
T ss_pred ECCEEeCCH--HHHHHHHHhCCCcCEEEEEEEE
Confidence 999999865 788888853 2368888875
No 198
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=96.96 E-value=0.0011 Score=68.44 Aligned_cols=63 Identities=14% Similarity=0.151 Sum_probs=51.8
Q ss_pred CCCCCeEEcCC--c-eEEEEccc--------chhhhhC--CCCCCEE--eecccccCCCHHHHHHHHhcc--CcEEEEEe
Q psy6995 259 LGQLGFHVQPD--G-LVTEVEHM--------GLAYQEG--LKQGCRL--ICKVAVSTLSHDQMVDLLKTS--SLVTVTVI 321 (342)
Q Consensus 259 ~gqLGFhV~~E--G-~Vt~VE~~--------g~Ae~AG--LR~G~RL--Icg~sV~~lsHeq~vdlLrts--~~V~v~Vi 321 (342)
.+++|+.+..+ | +|..|.++ ++|++|| |+ ||+| |||+++..+. ++..+|+.. ..|+|+|.
T Consensus 736 ~~g~G~~~~~~~~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~~~--~~~~~~~~~~g~~v~l~v~ 812 (1045)
T 1k32_A 736 SGRIACDFKLDGDHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETVGAGS--NIYRVLSEKAGTSARIRLS 812 (1045)
T ss_dssp CCBCSEEEEEETTEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEECBTTB--CHHHHHHTTTTSEEEEEEE
T ss_pred cceecEEEEEeCCEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEccchh--hHHHhhcCCCCCEEEEEEE
Confidence 36899888644 2 88899987 9999999 99 9999 9999999886 788899843 36888887
Q ss_pred CCC
Q psy6995 322 PAL 324 (342)
Q Consensus 322 pP~ 324 (342)
++.
T Consensus 813 r~~ 815 (1045)
T 1k32_A 813 GKG 815 (1045)
T ss_dssp CSS
T ss_pred CCC
Confidence 753
No 199
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=96.70 E-value=0.0021 Score=52.89 Aligned_cols=47 Identities=21% Similarity=0.208 Sum_probs=38.5
Q ss_pred eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhc---cCcEEEEE
Q psy6995 271 LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKT---SSLVTVTV 320 (342)
Q Consensus 271 ~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrt---s~~V~v~V 320 (342)
+|..|.++++|++| |++||+| |||+.|.+ -+++...|+. ...|.|+|
T Consensus 28 ~V~~V~~~spA~~a-L~~GD~Il~InG~~v~~--~~dl~~~l~~~~~g~~v~l~V 79 (125)
T 2hga_A 28 QIDSVVPGSPASKV-LTPGLVIESINGMPTSN--LTTYSAALKTISVGEVINITT 79 (125)
T ss_dssp EEEEECSSSGGGGT-SCTTCEEEEETTEECSS--HHHHHHHHTTCCTTCEEEEEE
T ss_pred EEEEECCCChHHHh-cCCCCEEEEECCEEcCC--HHHHHHHHHhcCCCCEEEEEE
Confidence 78899999999999 9999999 99999975 4778888863 23566655
No 200
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=96.32 E-value=0.0017 Score=63.49 Aligned_cols=52 Identities=21% Similarity=0.302 Sum_probs=42.7
Q ss_pred Cc-eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhc---cCcEEEEEeC
Q psy6995 269 DG-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKT---SSLVTVTVIP 322 (342)
Q Consensus 269 EG-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrt---s~~V~v~Vip 322 (342)
.| +|.+|.++++|++||||+||+| |||+.|.+. +++..+|.. ..+|+|+|..
T Consensus 286 ~G~~V~~V~~gspA~~AGL~~GDvI~~inG~~v~~~--~~l~~~l~~~~~g~~v~l~v~R 343 (448)
T 1ky9_A 286 RGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSF--AALRAQVGTMPVGSKLTLGLLR 343 (448)
T ss_dssp CSEECCCCTTCSSSTTTTCCTTCEECBSSSSBCCSS--HHHHHHTTSSBTTCCCEEEEES
T ss_pred CceEEEEeccCCHHHHcCCCCCCEEEEECCEEcCCH--HHHHHHHHhcCCCCEEEEEEEE
Confidence 35 7889999999999999999999 999999876 677777764 2367777754
No 201
>4f7g_A Talin-1; alpha-helix bundle, integrin activation, cell adhesion; 2.05A {Mus musculus}
Probab=95.82 E-value=0.042 Score=48.26 Aligned_cols=86 Identities=15% Similarity=0.273 Sum_probs=62.8
Q ss_pred ceeeEEEEEeccCCCCeeeeeeeeeccceEEEEEccCCcEEEeeeccceeeecccCCcEEEEeecCceEEEEecCCCCCC
Q psy6995 150 KGAICWQVSLEDSKTGSLMHCVLAISTDSVVLVEEQSRDLVFVAPAKSVLGWATSTNSLRLYHHQGEVTRIHMREGGGGD 229 (342)
Q Consensus 150 ~GAl~W~V~v~D~s~~~~i~ClLGIS~e~lVLIe~~s~~VVFncpc~dVIGWt~s~~~LkIyY~rGE~i~l~~~e~~~~~ 229 (342)
=|.-...|.-...+.....+++|||+.+-|.++++.++++++..|-.+|.-|.+..+.+.|-++......+.+... +
T Consensus 125 yG~~~f~v~~~~~g~~~~~~~~LgI~~~GI~v~~~~tk~~l~~~~~~~I~~~~~~~~~f~I~~~~~~~~~~~~~T~---q 201 (222)
T 4f7g_A 125 YGVSFFLVKEKMKGKNKLVPRLLGITKECVMRVDEKTKEVIQEWSLTNIKRWAASPKSFTLDFGDYQDGYYSVQTT---E 201 (222)
T ss_dssp TTCEEEEEEEECTTSSCEEEEEEEECSSEEEEECTTTCCEEEEEEGGGCCEEEECSSEEEEECCTTSSSCEEEECS---C
T ss_pred cCcEEEEEEEecCCCCCCCCEEEEEcCCcEEEEcCCCCceeEeccHHHeeeeccCCCEEEEEECCccceEEEEECC---c
Confidence 3445555544322333346899999999999999999999999999999999999999999886442222444443 5
Q ss_pred hhhHHHHHH
Q psy6995 230 RDELMEVVV 238 (342)
Q Consensus 230 ~edl~EIV~ 238 (342)
+++|.+++.
T Consensus 202 ~~~I~~Li~ 210 (222)
T 4f7g_A 202 GEQIAQLIA 210 (222)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 688877765
No 202
>1mix_A Talin; focal adhesion, integrin binding, FERM domain, cytoskeleton, structural protein; 1.75A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 PDB: 1miz_B 1mk7_B 1mk9_B 1y19_B 3g9w_A 2hrj_A 2g35_A* 2k00_A 2h7d_A* 2h7e_A* 2kgx_B
Probab=95.58 E-value=0.067 Score=45.66 Aligned_cols=86 Identities=15% Similarity=0.273 Sum_probs=62.3
Q ss_pred ceeeEEEEEeccCCCCeeeeeeeeeccceEEEEEccCCcEEEeeeccceeeecccCCcEEEEeecCceEEEEecCCCCCC
Q psy6995 150 KGAICWQVSLEDSKTGSLMHCVLAISTDSVVLVEEQSRDLVFVAPAKSVLGWATSTNSLRLYHHQGEVTRIHMREGGGGD 229 (342)
Q Consensus 150 ~GAl~W~V~v~D~s~~~~i~ClLGIS~e~lVLIe~~s~~VVFncpc~dVIGWt~s~~~LkIyY~rGE~i~l~~~e~~~~~ 229 (342)
=|+-...|.-.+.+.....+++|||++.-|.++++.++.+++..+-.+|..|.+..+.+.|-++.-....+.+... +
T Consensus 114 yG~~~f~v~~~~~g~~~~~~~~Lgi~~~Gi~~~~~~~~~~l~~~~~~~I~~~~~~~~~f~i~~~~~~~~~~~~~t~---~ 190 (206)
T 1mix_A 114 YGVSFFLVKEKMKGKNKLVPRLLGITKECVMRVDEKTKEVIQEWSLTNIKRWAASPKSFTLDFGDYQDGYYSVQTT---E 190 (206)
T ss_dssp TTCEEEEEEECCSSCSSCEEEEEEECSSEEEEEETTTCCEEEEEEGGGCCEEEECSSEEEEECGGGSSSCEEEECS---C
T ss_pred cCceEEEEEEccCCCCCcCcEEEEEcccceEEeCCCCCceeeeeehhHeeecccCCCEEEEEeCcccceEEEEECC---c
Confidence 3555556655433333346899999999999999999999999999999999999888888877543223333332 4
Q ss_pred hhhHHHHHH
Q psy6995 230 RDELMEVVV 238 (342)
Q Consensus 230 ~edl~EIV~ 238 (342)
.+++..++.
T Consensus 191 ~~~i~~Li~ 199 (206)
T 1mix_A 191 GEQIAQLIA 199 (206)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 577766664
No 203
>3ivf_A Talin-1; FERM domain, cell membrane, cell projection, cytoskeleton, M phosphoprotein, cell adhesion, structural protein; 1.94A {Mus musculus} PDB: 2kma_A 2kc1_A
Probab=94.07 E-value=0.21 Score=46.95 Aligned_cols=84 Identities=15% Similarity=0.290 Sum_probs=63.7
Q ss_pred ceeeEEEEEeccCCCCeeeeeeeeeccceEEEEEccCCcEEEeeeccceeeecccCCcEEEEeecC--ceEEEEecCCCC
Q psy6995 150 KGAICWQVSLEDSKTGSLMHCVLAISTDSVVLVEEQSRDLVFVAPAKSVLGWATSTNSLRLYHHQG--EVTRIHMREGGG 227 (342)
Q Consensus 150 ~GAl~W~V~v~D~s~~~~i~ClLGIS~e~lVLIe~~s~~VVFncpc~dVIGWt~s~~~LkIyY~rG--E~i~l~~~e~~~ 227 (342)
=|.-...|.-...+.+...+++|||+.+-|.++++.++.+++..|-.+|.-|.+..+.+.|-++.- ..+++.+.
T Consensus 279 yG~~~f~vk~~~~g~~~~~~~~LgI~~~GI~v~~~~~k~~l~~~~~~~I~~~~~~~~~f~I~~~~~~~~~~~~~T~---- 354 (371)
T 3ivf_A 279 YGVSFFLVKEKMKGKNKLVPRLLGITKECVMRVDEKTKEVIQEWSLTNIKRWAASPKSFTLDFGDYQDGYYSVQTT---- 354 (371)
T ss_dssp TTCEEEEEEEECTTSSCEEEEEEEECSSEEEEEETTTCCEEEEEEGGGCCEEEEETTEEEEECGGGSSSCEEEECS----
T ss_pred cCcEEEEEEEeccCCCCCccEEEEEcCCcEEEEcCCCCceEEeeehhheeeeecCCCEEEEEECCccCcEEEEECC----
Confidence 355566664333333444689999999999999999999999999999999999999999988743 24444443
Q ss_pred CChhhHHHHHH
Q psy6995 228 GDRDELMEVVV 238 (342)
Q Consensus 228 ~~~edl~EIV~ 238 (342)
+++++.+++.
T Consensus 355 -~~~~I~~Li~ 364 (371)
T 3ivf_A 355 -EGEQIAQLIA 364 (371)
T ss_dssp -CHHHHHHHHH
T ss_pred -hHHHHHHHHH
Confidence 4588887765
No 204
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=93.28 E-value=0.073 Score=54.15 Aligned_cols=52 Identities=21% Similarity=0.275 Sum_probs=37.6
Q ss_pred Cc-eEEEEcccchhhhhCCCCCCEE--eecccccCCC-----------HHHHHHHHhccCcEEEEEe
Q psy6995 269 DG-LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLS-----------HDQMVDLLKTSSLVTVTVI 321 (342)
Q Consensus 269 EG-~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~ls-----------Heq~vdlLrts~~V~v~Vi 321 (342)
.| +|++|+++++|++| ||+||.| |||+.|.+.. ...++...+-..+|+|+|+
T Consensus 277 ~Gv~V~~V~~~spA~~a-l~~GDvI~~idg~~V~~~g~~~~~~~~~~~l~~~v~~~~~Gd~v~l~v~ 342 (539)
T 4fln_A 277 EGVLVRRVEPTSDASKV-LKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQKFAGDIAEIGII 342 (539)
T ss_dssp BCEEEEEECTTSGGGGT-CCTTCEEEEETTEECBSSSEEECSTTCEEETHHHHHTSCTTCEEEEEEE
T ss_pred CceeeecccCCChHHhC-ccCCCEEEEECCEEeCcCCeeccccchhHHHHHHHHcCCCCCEEEEEEE
Confidence 35 89999999999987 9999999 9999997643 2334444333445666554
No 205
>4dxa_B KREV interaction trapped protein 1; GTPase, FERM, protein-protein interaction, GTP binding, CYTO protein binding; HET: GSP; 1.95A {Homo sapiens} PDB: 3u7d_A
Probab=90.82 E-value=1.6 Score=40.28 Aligned_cols=86 Identities=8% Similarity=0.232 Sum_probs=58.5
Q ss_pred cceeeEEEEEec-cCC--CCeeeeeeeeeccceEEEEEccCCcEEEeeeccceeeeccc--CCcEEEEeec-CceEEEEe
Q psy6995 149 QKGAICWQVSLE-DSK--TGSLMHCVLAISTDSVVLVEEQSRDLVFVAPAKSVLGWATS--TNSLRLYHHQ-GEVTRIHM 222 (342)
Q Consensus 149 s~GAl~W~V~v~-D~s--~~~~i~ClLGIS~e~lVLIe~~s~~VVFncpc~dVIGWt~s--~~~LkIyY~r-GE~i~l~~ 222 (342)
.=|.-...|... +.+ .....+++|||+..-|.++++.++.++...|-.++- |..+ ...++|-.+. +..+.+.
T Consensus 220 ~yG~~~f~v~~~~~~~g~~~~~~~~~LgV~~~Gv~v~~~~tk~~l~~~~~~~is-w~~s~~~~~f~i~~~~~~~~~~~~- 297 (322)
T 4dxa_B 220 TYGAAFFTGQIFTKASPSNHKVIPVYVGVNIKGLHLLNMETKALLISLKYGCFM-WQLGDTDTCFQIHSMENKMSFIVH- 297 (322)
T ss_dssp TTTCEEEEEEEECC-------EEEEEEEECSSEEEEEETTTCCEEEEEETTSEE-EEECSSTTEEEEEESSSCCEEEEE-
T ss_pred CcCeEEEEEEEeccCCCCccCCCeEEEEEccCceEEEcCCCceeeeccccceeE-EeecCCCCEEEEEECCCCccEEEE-
Confidence 346666666542 222 233578999999999999999999999999999975 9944 4457776643 3344333
Q ss_pred cCCCCCChhhHHHHHHhh
Q psy6995 223 REGGGGDRDELMEVVVRL 240 (342)
Q Consensus 223 ~e~~~~~~edl~EIV~RL 240 (342)
.. ++++|..+|.-|
T Consensus 298 -t~---q~~~i~~li~~~ 311 (322)
T 4dxa_B 298 -TK---QAGLVVKLLMKL 311 (322)
T ss_dssp -CT---THHHHHHHHHHH
T ss_pred -eC---cHHHHHHHHHHH
Confidence 32 568888877654
No 206
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=83.10 E-value=0.43 Score=48.56 Aligned_cols=42 Identities=5% Similarity=0.132 Sum_probs=37.5
Q ss_pred eEEEEcccchhhhhCCCCCCEE--eecccccCCCHHHHHHHHhccC
Q psy6995 271 LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTSS 314 (342)
Q Consensus 271 ~Vt~VE~~g~Ae~AGLR~G~RL--Icg~sV~~lsHeq~vdlLrts~ 314 (342)
+|+.|.+.++|..+|+++||.| |||+.|.++. ++.++|+.+.
T Consensus 418 vvs~V~~~s~a~~~g~~~gdiI~~vNg~~V~s~~--~l~~~l~~~k 461 (539)
T 4fln_A 418 ILSQVLANEVNIGYEDMNNQQVLKFNGIPIRNIH--HLAHLIDMCK 461 (539)
T ss_dssp EEEEECCCGGGTTCSSCCSEEEEEETTEECCSHH--HHHHHHHTCC
T ss_pred EEEEecCCchhhhcCCCCCCEEEeECCEEcCCHH--HHHHHHHHcC
Confidence 7899999999999999999999 9999998764 6888888654
No 207
>3au4_A Myosin-X; protein-protein complex, motor protein cargo transportation, protein-apoptosis complex; 1.90A {Homo sapiens} PDB: 3au5_A 3pzd_A
Probab=82.65 E-value=4 Score=40.43 Aligned_cols=81 Identities=11% Similarity=0.151 Sum_probs=58.7
Q ss_pred ceeeEEEEEeccCCCCeeeeeeeeeccceEEEEEccCCcEEEeeeccceeeecc-cCCcEEEEeecCceEEEEecCCCCC
Q psy6995 150 KGAICWQVSLEDSKTGSLMHCVLAISTDSVVLVEEQSRDLVFVAPAKSVLGWAT-STNSLRLYHHQGEVTRIHMREGGGG 228 (342)
Q Consensus 150 ~GAl~W~V~v~D~s~~~~i~ClLGIS~e~lVLIe~~s~~VVFncpc~dVIGWt~-s~~~LkIyY~rGE~i~l~~~e~~~~ 228 (342)
-|+-...|...+.+ ...+++|||+..-|.++++.++.++..++-.+|..|.. ..+.+.|-.+ |..+.+.+ .
T Consensus 450 yG~~~F~v~~~~~~--~~~~l~LgV~~~GI~v~~~~~k~~l~~~~~~~I~~~~~~~~~~f~i~~~-~~~l~f~T--~--- 521 (555)
T 3au4_A 450 YGSTLFDVECKEGG--FPQELWLGVSADAVSVYKRGEGRPLEVFQYEHILSFGAPLANTYKIVVD-ERELLFET--S--- 521 (555)
T ss_dssp TTCEEEEEEEEESS--SCSEEEEEECSSEEEEEETTCSSCSEEEEGGGEEEEEEEETTEEEEEET-TEEEEEEC--T---
T ss_pred cCceEEEEEecCCC--CCceEEEEEcccceEEECCCCCeeEEEEEhhheeeecCCCCCEEEEEEC-CcEEEEEC--C---
Confidence 35555556533222 23489999999999999999999999999999999984 5677888776 55444443 3
Q ss_pred ChhhHHHHHH
Q psy6995 229 DRDELMEVVV 238 (342)
Q Consensus 229 ~~edl~EIV~ 238 (342)
+++++..+|+
T Consensus 522 qa~~i~~LI~ 531 (555)
T 3au4_A 522 EVVDVAKLMK 531 (555)
T ss_dssp THHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 4678777765
No 208
>3pvl_A Myosin VIIA isoform 1; protein complex, novel folding, protein cargo binding, cargo proteins, motor protein-protein transport complex; 2.80A {Mus musculus}
Probab=80.47 E-value=6.9 Score=40.45 Aligned_cols=66 Identities=18% Similarity=0.293 Sum_probs=51.8
Q ss_pred eeeeeeeccceEEEEEccCCcEEEeeeccceeeecccC------CcEEEEeecCceEEEEecCCCCCChhhHHHHHHh
Q psy6995 168 MHCVLAISTDSVVLVEEQSRDLVFVAPAKSVLGWATST------NSLRLYHHQGEVTRIHMREGGGGDRDELMEVVVR 239 (342)
Q Consensus 168 i~ClLGIS~e~lVLIe~~s~~VVFncpc~dVIGWt~s~------~~LkIyY~rGE~i~l~~~e~~~~~~edl~EIV~R 239 (342)
.+++|||+..-|.+++..++.++ ..|-..|..|.+.. ..+.|-..+|+...+.+.+ +++|.++|+-
T Consensus 493 ~~l~LgVn~~GV~v~d~~~k~ll-~f~~~eI~~is~~~~~~~~~~~ftl~~~~~~~~~F~T~~-----a~~I~~LI~~ 564 (655)
T 3pvl_A 493 SDVIVAVNWTGVYFVDEQEQVLL-ELSFPEIMAVSSSRGTKMMAPSFTLATIKGDEYTFTSSN-----AEDIRDLVVT 564 (655)
T ss_dssp SEEEEEEETTEEEEECTTCCEEE-EEEGGGEEEEEEECCCSSSCCEEEEEETTSCEEEEECTT-----HHHHHHHHHH
T ss_pred ccEEEEEcCCceEEEcCCCceEE-EechhHceEEeccCcccccccEEEEEeccCceEEEEcCC-----HHHHHHHHHH
Confidence 47999999999999999998544 79999999999886 3455555577777776555 5888877653
No 209
>3so6_A LDL receptor adaptor protein; PTB, endocytic adaptor, autosomal reces hypercholesterolemia, ARH, cholesterol; 1.37A {Rattus norvegicus}
Probab=73.22 E-value=5.3 Score=32.12 Aligned_cols=45 Identities=11% Similarity=0.193 Sum_probs=36.9
Q ss_pred eeeeeeeeccceEEEEEccCCcEEEeeeccceeeecccCCcEEEE
Q psy6995 167 LMHCVLAISTDSVVLVEEQSRDLVFVAPAKSVLGWATSTNSLRLY 211 (342)
Q Consensus 167 ~i~ClLGIS~e~lVLIe~~s~~VVFncpc~dVIGWt~s~~~LkIy 211 (342)
...+.|-||.+.|-|+++.++.+++++|-+.|.=|+......++|
T Consensus 43 ~~~v~L~Vs~~gi~l~d~~~~~~~~~~~i~~Isf~~~d~~~~~~F 87 (137)
T 3so6_A 43 LQKVTLKVSPRGIILTDSLTSQLIENVSIYRISYCTADKMHDKVF 87 (137)
T ss_dssp CEEEEEEEETTEEEEEETTTCCEEEEEEGGGEEEEEECSSSTTEE
T ss_pred CCEEEEEEeCCeEEEEECCCCcEEEeeccCEEEEEEecCCCCCEE
Confidence 357999999999999999999999999999887777654444443
No 210
>1ef1_A Moesin; membrane, FERM domain, tail domain, membrane protein; 1.90A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1sgh_A 1j19_A 2emt_A 2ems_A 2d10_A 2d11_A 2yvc_A 2d2q_A 2zpy_A 1gc7_A 1gc6_A 1ni2_A
Probab=65.69 E-value=26 Score=31.34 Aligned_cols=57 Identities=7% Similarity=-0.014 Sum_probs=44.6
Q ss_pred eeeeeeeccceEEEEEccCC-cEEEeeeccceeeecccCCcEEEEeec--CceEEEEecC
Q psy6995 168 MHCVLAISTDSVVLVEEQSR-DLVFVAPAKSVLGWATSTNSLRLYHHQ--GEVTRIHMRE 224 (342)
Q Consensus 168 i~ClLGIS~e~lVLIe~~s~-~VVFncpc~dVIGWt~s~~~LkIyY~r--GE~i~l~~~e 224 (342)
.+++|||++.-|.+++..++ ..+...+-..|..|++..+.+.|-... ++.+.+.+..
T Consensus 211 ~~~~Lgv~~~Gi~v~~~~~k~~~~~~f~w~~I~~~~~~~~~f~i~~~~~~~~~~~f~~~~ 270 (294)
T 1ef1_A 211 SELWLGVDALGLNIYEQNDRLTPKIGFPWSEIRNISFNDKKFVIKPIDKKAPDFVFYAPR 270 (294)
T ss_dssp CEEEEEEETTEEEEEETTCSSSCSEEEEGGGEEEEEEETTEEEEEESSSSSCCEEEECSS
T ss_pred CEEEEEEecCcEEEEeCCCccccceEEEcccceEeeecCCEEEEEEccCccceEEEEeCC
Confidence 58999999999999999998 555667789999999988877776652 3455665544
No 211
>2ej8_A DCC-interacting protein 13 alpha; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.84A {Homo sapiens}
Probab=61.59 E-value=14 Score=31.24 Aligned_cols=44 Identities=23% Similarity=0.359 Sum_probs=37.6
Q ss_pred eeeeeeeccceEEEEEccCCcEEEeeeccceeeecccCCcEEEE
Q psy6995 168 MHCVLAISTDSVVLVEEQSRDLVFVAPAKSVLGWATSTNSLRLY 211 (342)
Q Consensus 168 i~ClLGIS~e~lVLIe~~s~~VVFncpc~dVIGWt~s~~~LkIy 211 (342)
..|.|-||.+.|-|+|+.++.++.+.|=+.|.=|+......++|
T Consensus 57 ~~v~L~VS~~gi~l~d~~tk~~~~~~~i~~ISfca~d~~~~r~F 100 (160)
T 2ej8_A 57 TESHLLVTCDCLKLIDPQTQVTRLTFPLPCVVLYATHQENKRLF 100 (160)
T ss_dssp CEEEEEEESSEEEEECTTTCCEEEEEEGGGEEEEEEETTEEEEE
T ss_pred CEEEEEEECCeEEEEeCCCCeEEEEeeCCeEEEEEecCCCCeEE
Confidence 47899999999999999999999999988888887766655554
No 212
>2ela_A Adapter protein containing PH domain, PTB domain and leucine zipper motif 1; APPL, cell cycle; 2.00A {Homo sapiens}
Probab=58.44 E-value=18 Score=31.35 Aligned_cols=44 Identities=23% Similarity=0.359 Sum_probs=37.7
Q ss_pred eeeeeeeccceEEEEEccCCcEEEeeeccceeeecccCCcEEEE
Q psy6995 168 MHCVLAISTDSVVLVEEQSRDLVFVAPAKSVLGWATSTNSLRLY 211 (342)
Q Consensus 168 i~ClLGIS~e~lVLIe~~s~~VVFncpc~dVIGWt~s~~~LkIy 211 (342)
..+.|-||.+.|-|+|+.++.++.+.|=+.|.=|+......++|
T Consensus 70 ~~V~L~VS~~gI~l~d~~tk~~i~~~~i~~ISfca~d~~d~r~F 113 (175)
T 2ela_A 70 TESHLLVTCDCLKLIDPQTQVTRLTFPLPCVVLYATHQENKRLF 113 (175)
T ss_dssp EEEEEEECSSEEEEECTTTCCEEEEEEGGGEEEEEEETTEEEEE
T ss_pred CEEEEEEECCeEEEEeCCCCcEEEEeecCEEEEEEeCCCCCcEE
Confidence 47899999999999999999999999988888777766655554
No 213
>3f0w_A NUMB-R, NUMB-like protein; PH domain-like, PID domain, phosphoprotein, signaling protei structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens} PDB: 1wj1_A 2nmb_A* 1ddm_A
Probab=55.60 E-value=17 Score=30.89 Aligned_cols=69 Identities=17% Similarity=0.187 Sum_probs=48.4
Q ss_pred eeeeeeeeccceEEEEEccCCcEEEeeeccceeeecccCCcEEEE----eecC----ceEEEEecCCCCCChhhHHHHHH
Q psy6995 167 LMHCVLAISTDSVVLVEEQSRDLVFVAPAKSVLGWATSTNSLRLY----HHQG----EVTRIHMREGGGGDRDELMEVVV 238 (342)
Q Consensus 167 ~i~ClLGIS~e~lVLIe~~s~~VVFncpc~dVIGWt~s~~~LkIy----Y~rG----E~i~l~~~e~~~~~~edl~EIV~ 238 (342)
...+.|-||.+.|-|+++.+++++.++|-+.|.=|+......++| -+.+ .|=.+.|... .+++|.+-|.
T Consensus 77 ~~~V~L~VS~~GI~l~d~~t~~~l~~~~i~~ISf~~~d~~~~~~FafIar~~~~~~~~CHvF~c~~~---~A~~I~~aIg 153 (168)
T 3f0w_A 77 SVKSVLWVSADGLRVVDDKTKDLLVDQTIEKVSFCAPDRNLDKAFSYICRDGTTRRWICHCFLALKD---SGERLSHAVG 153 (168)
T ss_dssp CEEEEEEECSSEEEEEETTTCCEEEEEEGGGEEEEEECSSCTTEEEEEEEETTTTEEEEEEEEESSS---CHHHHHHHHH
T ss_pred CcEEEEEEECCEEEEEeCCCCeEEEeeecCcEEEEecCCCCCcEEEEEEecCCCCcEEEEEEEeccc---hHHHHHHHHH
Confidence 357999999999999999999999999988887777654443443 2222 2555666543 3666655544
No 214
>2v76_A Docking protein 1; alternative splicing, protein-binding, PTB domain, phosphorylation, adaptor protein; HET: PGE; 1.60A {Homo sapiens}
Probab=54.59 E-value=50 Score=26.99 Aligned_cols=79 Identities=10% Similarity=0.196 Sum_probs=52.6
Q ss_pred EEEEEeccCCCCeee----eeeeeeccceEEEEEc----cCCcEEEeeeccceeeecccCCcEEEEeecCc-------eE
Q psy6995 154 CWQVSLEDSKTGSLM----HCVLAISTDSVVLVEE----QSRDLVFVAPAKSVLGWATSTNSLRLYHHQGE-------VT 218 (342)
Q Consensus 154 ~W~V~v~D~s~~~~i----~ClLGIS~e~lVLIe~----~s~~VVFncpc~dVIGWt~s~~~LkIyY~rGE-------~i 218 (342)
.|.|.+.....+.+. +|+|-|.++.|.|.+. .++..++..|-+.+=.+-...+ ..+|+-|. ..
T Consensus 5 ~f~V~v~~t~as~r~~L~G~y~L~v~~~~l~L~~~~~~~~~~~~~~~Wp~~~LRryG~d~~--~FsFEaGRrc~tG~G~f 82 (107)
T 2v76_A 5 QFWVTVQRTEAAERCGLHGSYVLRVEAERLTLLTVGAQSQILEPLLSWPYTLLRRYGRDKV--MFSFEAGRRCPSGPGTF 82 (107)
T ss_dssp EEEEEECCCHHHHHTTCCSEEEEEECSSEEEEEEEC----CEEEEEEEEGGGEEEEEECSS--EEEEEECTTSTTCSEEE
T ss_pred EEEEEEEECHHHHhcCCCccEEEEEcCCEEEEEecCccCCCCceeEEEEhHHhhhcCccCC--EEEEEecCCCCCCCcEE
Confidence 578888655432222 7999999999999985 4677889999888877766443 46666553 23
Q ss_pred EEEecCCCCCChhhHHHHHHh
Q psy6995 219 RIHMREGGGGDRDELMEVVVR 239 (342)
Q Consensus 219 ~l~~~e~~~~~~edl~EIV~R 239 (342)
.+++.+ .+||-++|++
T Consensus 83 ~F~~~~-----~~~If~~l~~ 98 (107)
T 2v76_A 83 TFQTAQ-----GNDIFQAVET 98 (107)
T ss_dssp EEECSC-----HHHHHHHHHH
T ss_pred EEEeCC-----HHHHHHHHHH
Confidence 445444 3666666554
No 215
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=51.19 E-value=48 Score=33.65 Aligned_cols=57 Identities=5% Similarity=-0.016 Sum_probs=44.9
Q ss_pred eeeeeeeccceEEEEEccCC-cEEEeeeccceeeecccCCcEEEEeec--CceEEEEecC
Q psy6995 168 MHCVLAISTDSVVLVEEQSR-DLVFVAPAKSVLGWATSTNSLRLYHHQ--GEVTRIHMRE 224 (342)
Q Consensus 168 i~ClLGIS~e~lVLIe~~s~-~VVFncpc~dVIGWt~s~~~LkIyY~r--GE~i~l~~~e 224 (342)
.+++|||++.-|.+++..++ ..+...|-..|..|++..+.+.|-.+. ++.+.+.+..
T Consensus 214 ~~l~LGV~~~GI~v~~~~~k~~~l~~f~w~~I~~isf~~k~F~I~~~~~~~~~l~F~t~~ 273 (575)
T 2i1j_A 214 TELWLGVDALGLNIYEKDDKLTPKIGFPWSEIRNISFNDRKFIIKPIDKKAPDFVFFAPR 273 (575)
T ss_dssp CEEEEEECSSEEEEEETTCSSSCSEEEEGGGEEEEEEETTEEEEEESCTTSCCEEEECSC
T ss_pred CEEEEEEcCCeeEEEeCCCCcccceEecHHHhhcccCCCCeEEEEEccCCcceeEEEeCC
Confidence 58999999999999999988 455667889999999998887777653 3455555444
No 216
>1ntv_A Disabled homolog 1; beta-sandwich, signaling protein; 1.50A {Mus musculus} SCOP: b.55.1.2 PDB: 1nu2_A* 1oqn_A*
Probab=46.70 E-value=26 Score=29.35 Aligned_cols=35 Identities=17% Similarity=0.177 Sum_probs=29.0
Q ss_pred eeeeeeeccceEEEEEccCCcEEEeeeccceeeec
Q psy6995 168 MHCVLAISTDSVVLVEEQSRDLVFVAPAKSVLGWA 202 (342)
Q Consensus 168 i~ClLGIS~e~lVLIe~~s~~VVFncpc~dVIGWt 202 (342)
..|.|-||.+-|-|+++.++.++++.|=+.|.=.+
T Consensus 61 ~~v~L~IS~~GI~v~d~~tk~~~~~~~l~~ISf~a 95 (152)
T 1ntv_A 61 QKIFLTISFGGIKIFDEKTGALQHHHAVHEISYIA 95 (152)
T ss_dssp EEEEEEEETTEEEEEETTTCCEEEEECGGGEEEEE
T ss_pred CEEEEEEECCeEEEEECCCCceEeeeecCcEEEEe
Confidence 48999999999999999999999887766544333
No 217
>3b77_A Uncharacterized protein; pleckstrin-homology domain, structural genomics, joint cente structural genomics, JCSG; 2.42A {Exiguobacterium sibiricum} SCOP: b.55.1.13
Probab=42.62 E-value=79 Score=28.68 Aligned_cols=73 Identities=11% Similarity=0.162 Sum_probs=54.1
Q ss_pred eeeeccceEEEEEcc----CCcEEEeeecc--ceeeecccCC-------cEEEEeecCceEEEEecCCCCCChhhHHHHH
Q psy6995 171 VLAISTDSVVLVEEQ----SRDLVFVAPAK--SVLGWATSTN-------SLRLYHHQGEVTRIHMREGGGGDRDELMEVV 237 (342)
Q Consensus 171 lLGIS~e~lVLIe~~----s~~VVFncpc~--dVIGWt~s~~-------~LkIyY~rGE~i~l~~~e~~~~~~edl~EIV 237 (342)
...+-+--|+++|-. .|+-+.++|.+ .|-.|+..+. .|+||++ |....|..... +.+|++++-
T Consensus 40 ~~iFTNkRLI~vD~Qg~TGKK~~~~siPY~~~~I~~~siETAGtfDlDaElki~i~-~~~~~Ief~K~---~~~di~~ly 115 (193)
T 3b77_A 40 EYCFTNLALVHLDGESAVSSKRVLYRYPYAHYPIRHVMFETAGTVDLDVEIKFEIG-GKHYSIDVDKK---QLEHVKDLY 115 (193)
T ss_dssp EEEEESSEEEEEECCCC--CCCEEEEEETTTSCEEEEEEECCCSSCCEEEEEEEET-TEEEEEEEEGG---GHHHHHHHH
T ss_pred EEEEecchhheeccccccceeEEEEEeccCCCceeEEEEEecceeccCccEEEEEc-CceEEEEeCCc---chhhHHHHH
Confidence 345666677788844 77899999999 9999976543 4999995 66777777774 568999998
Q ss_pred HhhhccCCCC
Q psy6995 238 VRLRAATPGS 247 (342)
Q Consensus 238 ~RL~~VT~Gc 247 (342)
+-|..++.-|
T Consensus 116 k~L~~is~~~ 125 (193)
T 3b77_A 116 KALLAIAEKQ 125 (193)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8777665433
No 218
>1aqc_A X11; PTB domain; 2.30A {Homo sapiens} SCOP: b.55.1.2 PDB: 1x11_A*
Probab=42.57 E-value=29 Score=29.82 Aligned_cols=35 Identities=14% Similarity=0.217 Sum_probs=31.9
Q ss_pred eeeeeeeccceEEEEEccCCcEEEeeeccceeeec
Q psy6995 168 MHCVLAISTDSVVLVEEQSRDLVFVAPAKSVLGWA 202 (342)
Q Consensus 168 i~ClLGIS~e~lVLIe~~s~~VVFncpc~dVIGWt 202 (342)
.++.|-||.+.|-|+++.+++++++.|=+.|-=|+
T Consensus 64 ~~V~L~IS~~gikv~d~~t~~il~~~~l~~ISf~a 98 (172)
T 1aqc_A 64 TEVDLFILTQRIKVLNADTQETMMDHPLRTISYIA 98 (172)
T ss_dssp CEEEEEECSSEEEEEETTTCCEEEEEEGGGEEEEE
T ss_pred cEEEEEEECCeEEEEeCCCCceEeccccceEEEEe
Confidence 57999999999999999999999999988877774
No 219
>4dbb_A Amyloid beta A4 precursor protein-binding family 1; X11S/mints, PTB domain, chimera protein, protein transport; HET: IPA GOL; 1.90A {Rattus norvegicus}
Probab=40.57 E-value=33 Score=29.14 Aligned_cols=35 Identities=17% Similarity=0.248 Sum_probs=30.3
Q ss_pred eeeeeeeccceEEEEEccCCcEEEeeeccceeeec
Q psy6995 168 MHCVLAISTDSVVLVEEQSRDLVFVAPAKSVLGWA 202 (342)
Q Consensus 168 i~ClLGIS~e~lVLIe~~s~~VVFncpc~dVIGWt 202 (342)
..+.|-||.+.|-|+++.+++++.+.+-+.|.=++
T Consensus 53 ~~V~L~IS~~gIkv~d~~t~~~i~~~~l~~ISf~a 87 (162)
T 4dbb_A 53 TEVDLFISTQRIKVLNADTQEPMMDHPLRTISYIA 87 (162)
T ss_dssp EEEEEEEESSEEEEEETTTCCEEEEEEGGGEEEEE
T ss_pred cEEEEEEECCEEEEEECCCCcEEeeeecceeEEEE
Confidence 57999999999999999999999998877765444
No 220
>1h4r_A Merlin; FERM, neurofibromatosis, NF2, structural protein, cytoskeleton, anti-oncogene; 1.8A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1isn_A 3u8z_A
Probab=38.59 E-value=1.1e+02 Score=27.70 Aligned_cols=47 Identities=9% Similarity=0.096 Sum_probs=38.7
Q ss_pred eeeeeeeccceEEEEEccCCc-EEEeeeccceeeecccCCcEEEEeec
Q psy6995 168 MHCVLAISTDSVVLVEEQSRD-LVFVAPAKSVLGWATSTNSLRLYHHQ 214 (342)
Q Consensus 168 i~ClLGIS~e~lVLIe~~s~~-VVFncpc~dVIGWt~s~~~LkIyY~r 214 (342)
.+++|||++.-|.++++.++. .+...+-.+|..|++..+.+.|-.+.
T Consensus 231 ~~~~LgI~~~Gi~v~~~~~k~~~~~~f~w~~I~~~~~~~~~f~i~~~~ 278 (314)
T 1h4r_A 231 TELLLGVDALGLHIYDPENRLTPKISFPWNEIRNISYSDKEFTIKPLD 278 (314)
T ss_dssp CEEEEEECSSEEEEECTTCSSSCSEEEEGGGEEEEEEETTEEEEEESS
T ss_pred CEEEEEEeCCceEEEeCCCCcccceEEecccceEEEeeCCEEEEEEcC
Confidence 589999999999999999986 55667788999999888777765543
No 221
>1p5t_A DOK1, docking protein 1; signaling protein; 2.35A {Mus musculus} SCOP: b.55.1.2 PDB: 1uef_A*
Probab=38.18 E-value=1.2e+02 Score=25.51 Aligned_cols=80 Identities=8% Similarity=0.158 Sum_probs=52.6
Q ss_pred eEEEEEeccCCCCeee----eeeeeeccceEEEEEcc----CCcEEEeeeccceeeecccCCcEEEEeecCc-------e
Q psy6995 153 ICWQVSLEDSKTGSLM----HCVLAISTDSVVLVEEQ----SRDLVFVAPAKSVLGWATSTNSLRLYHHQGE-------V 217 (342)
Q Consensus 153 l~W~V~v~D~s~~~~i----~ClLGIS~e~lVLIe~~----s~~VVFncpc~dVIGWt~s~~~LkIyY~rGE-------~ 217 (342)
-.|.|.+.....+.+. +|+|-|.++.|.|.+.. +++.++..|-..+=.+-..++ ..+|+-|. .
T Consensus 6 ~~F~V~V~~teas~rc~L~G~y~L~vt~~~l~L~~~~~~~~~~~~l~~Wp~~~LRryG~d~~--~FsFEaGRrC~tGeG~ 83 (127)
T 1p5t_A 6 SQFWVTSQKTEASERCGLQGSYILRVEAEKLTLLTLGAQSQILEPLLFWPYTLLRRYGRDKV--MFSFEAGRRCPSGPGT 83 (127)
T ss_dssp EEEEEEEECCHHHHHTTCCSEEEEEECSSEEEEEEECTTTCSEEEEEEEEGGGEEEEEECSS--EEEEEECTTSTTCSEE
T ss_pred cEEEEEEEEChhHhhcCCCccEEEEEcCCEEEEEecCcccCCCcceEEEehHHhhhcCccCC--EEEEEecCCCCCCCcE
Confidence 4688888655432222 79999999999999854 577888999888777765443 44454433 2
Q ss_pred EEEEecCCCCCChhhHHHHHHh
Q psy6995 218 TRIHMREGGGGDRDELMEVVVR 239 (342)
Q Consensus 218 i~l~~~e~~~~~~edl~EIV~R 239 (342)
..++|.+ .+||-++|++
T Consensus 84 f~F~t~~-----~~~If~~l~~ 100 (127)
T 1p5t_A 84 FTFQTSQ-----GNDIFQAVEA 100 (127)
T ss_dssp EEEECSC-----HHHHHHHHHH
T ss_pred EEEEeCC-----HHHHHHHHHH
Confidence 3445444 4777666654
No 222
>1ip9_A BEM1 protein; ubiquitin alpha/beta roll, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.15.2.2 PDB: 1ipg_A 2kfk_A
Probab=38.10 E-value=30 Score=27.78 Aligned_cols=34 Identities=12% Similarity=0.360 Sum_probs=27.6
Q ss_pred CcEEEEeecCceEEEEecCCCCCChhhHHH-HHHhhhc
Q psy6995 206 NSLRLYHHQGEVTRIHMREGGGGDRDELME-VVVRLRA 242 (342)
Q Consensus 206 ~~LkIyY~rGE~i~l~~~e~~~~~~edl~E-IV~RL~~ 242 (342)
.-+|+||. +|.+-|+++.. -+=+++.+ |..||++
T Consensus 13 ~KVK~yy~-DDIiAIrvP~d--i~~~~L~dKi~~RLk~ 47 (85)
T 1ip9_A 13 TKIKFYYK-DDIFALMLKGD--TTYKELRSKIAPRIDT 47 (85)
T ss_dssp EEEEECBT-TCCEEEEECSC--CCHHHHHHHHHHHHTS
T ss_pred eEEEEEec-CcEEEEECCCC--CCHHHHHHHHHHHhcc
Confidence 35899997 79999999996 45667764 7889998
No 223
>1pfj_A TFIIH basal transcription factor complex P62 subunit; PH/PTB domain, structural proteomics in europe, spine, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.9 PDB: 2rnr_B
Probab=36.04 E-value=80 Score=26.11 Aligned_cols=71 Identities=15% Similarity=0.240 Sum_probs=48.2
Q ss_pred eeeeccceEEEEEccCCcEEEeeeccceeeecc-----cCCcEEEEeecCceEEEEecCCC--CCChhhHHHHHHhhh
Q psy6995 171 VLAISTDSVVLVEEQSRDLVFVAPAKSVLGWAT-----STNSLRLYHHQGEVTRIHMREGG--GGDRDELMEVVVRLR 241 (342)
Q Consensus 171 lLGIS~e~lVLIe~~s~~VVFncpc~dVIGWt~-----s~~~LkIyY~rGE~i~l~~~e~~--~~~~edl~EIV~RL~ 241 (342)
.|-++.|.|.-....++....+++-.+|-+=-- ..-.|+|+-+-|+...++..+.. ..+++.++|+++.+-
T Consensus 23 tL~l~~d~i~W~p~~~~~~~vs~~~~~I~~qq~SP~~k~KVqLqi~l~~~~~~~F~Ftn~~~a~~erd~VKd~L~~~l 100 (108)
T 1pfj_A 23 ALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEGKAKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLL 100 (108)
T ss_dssp EEEEETTEEEEECSSSSSCSEEEETTTCCCEEECCSSSSSCEEEEECSSSCEEEEECCCSSCTTHHHHHHHHHHHHHH
T ss_pred eEEEEcceEEEccCCCCCceEEEehhhhhcceeCCCCCccEEEEEEEeCCCceEEEEcCcHHHHHHHHHHHHHHHHHH
Confidence 456677766666655666555556677666332 34579999999999999888851 234667888777653
No 224
>1p3r_A Disabled homolog 2; PTB, signaling protein; 2.10A {Mus musculus} SCOP: b.55.1.2 PDB: 1m7e_A
Probab=34.40 E-value=51 Score=27.77 Aligned_cols=32 Identities=13% Similarity=0.248 Sum_probs=27.1
Q ss_pred eeeeeeeccceEEEEEccCCcEEEeeecccee
Q psy6995 168 MHCVLAISTDSVVLVEEQSRDLVFVAPAKSVL 199 (342)
Q Consensus 168 i~ClLGIS~e~lVLIe~~s~~VVFncpc~dVI 199 (342)
..|.|-||.+-|-|+++.++.++.+.|=+.|.
T Consensus 60 ~~V~L~IS~~GI~v~d~~tk~~~~~~~l~~IS 91 (160)
T 1p3r_A 60 QRIWVNISLSGIKIIDEKTGVIEHEHPVNKIS 91 (160)
T ss_dssp EEEEEEEETTEEEEEETTTCCEEEEECGGGEE
T ss_pred CEEEEEEECCeEEEEECCCCeEEEecccCeEE
Confidence 47999999999999999999998886655543
No 225
>2dlw_A Docking protein 2, isoform A; IRS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.81 E-value=12 Score=30.98 Aligned_cols=79 Identities=9% Similarity=0.138 Sum_probs=52.4
Q ss_pred EEEEEeccCCCCe----eeeeeeeeccceEEE-EEccCCcEEEeeeccceeeecccCCcEEEEeecCc-------eEEEE
Q psy6995 154 CWQVSLEDSKTGS----LMHCVLAISTDSVVL-VEEQSRDLVFVAPAKSVLGWATSTNSLRLYHHQGE-------VTRIH 221 (342)
Q Consensus 154 ~W~V~v~D~s~~~----~i~ClLGIS~e~lVL-Ie~~s~~VVFncpc~dVIGWt~s~~~LkIyY~rGE-------~i~l~ 221 (342)
.|.|.+....... .=+|+|-|..+.|.| .++.++..+...|-+-+=.+-...+ ..+|+-|. ...++
T Consensus 10 ~F~V~v~~t~as~r~~L~G~y~L~l~~~~l~L~~~~~~~~~l~~Wpl~~LRryG~d~~--~FsfEaGRrC~tGeG~f~F~ 87 (113)
T 2dlw_A 10 EFAVTMRPTEASERCHLRGSYTLRAGESALELWGGPEPGTQLYDWPYRFLRRFGRDKV--TFSFEAGRRCVSGEGNFEFE 87 (113)
T ss_dssp CEEEEBCCCHHHHHHTCCSEEEEEECSSBEECCCSSSSCCCSSCCBGGGCCCEEEETT--EEEEEECSSCSSCSEEEEEC
T ss_pred EEEEEEEEChhHHhcCCCccEEEEEcCCEEEEEecCCCCCceEEEEhHHhhhcCccCC--EEEEEecCCCCCCCCEEEEE
Confidence 4777775544321 128999999999999 7888999888888777666655443 45554443 22344
Q ss_pred ecCCCCCChhhHHHHHHh
Q psy6995 222 MREGGGGDRDELMEVVVR 239 (342)
Q Consensus 222 ~~e~~~~~~edl~EIV~R 239 (342)
+.. .++|-++|++
T Consensus 88 t~~-----~~~if~~l~~ 100 (113)
T 2dlw_A 88 TRQ-----GNEIFLALEE 100 (113)
T ss_dssp CST-----HHHHHHHHHH
T ss_pred cCC-----HHHHHHHHHH
Confidence 433 4777777766
No 226
>3hsa_A Pleckstrin homology domain; YP_926556.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE MLY; 1.99A {Shewanella amazonensis SB2B} SCOP: b.55.1.13 PDB: 3dcx_A*
Probab=31.57 E-value=1.2e+02 Score=25.68 Aligned_cols=62 Identities=11% Similarity=0.273 Sum_probs=44.4
Q ss_pred eeeccceEEEEEcc----CCcEEEeeeccceeeecccCC-------cEEEEeecCc-eEEEEecCCCCCChhhHHHHHH
Q psy6995 172 LAISTDSVVLVEEQ----SRDLVFVAPAKSVLGWATSTN-------SLRLYHHQGE-VTRIHMREGGGGDRDELMEVVV 238 (342)
Q Consensus 172 LGIS~e~lVLIe~~----s~~VVFncpc~dVIGWt~s~~-------~LkIyY~rGE-~i~l~~~e~~~~~~edl~EIV~ 238 (342)
..+-+--|+++|-. .|.-++++|.++|-.|+..+. -|+||..-+. .+.+..... .|+.+|=+
T Consensus 45 ~iFTnkRLI~vD~QG~TGkK~~~~siPY~sI~~~siETAG~fDlDaElki~isg~~~pi~~~f~k~-----~di~~i~k 118 (126)
T 3hsa_A 45 FVFTSXRLILIDXQGVTGXXVSYHSIPYXAIVHFQVETAGTFDMDAELXLWISGQHEPLVXELXRG-----TDVVGIQX 118 (126)
T ss_dssp EEEESSEEEEEEEESTTSCEEEEEEEEGGGEEEEEEEEESTTSCEEEEEEEETTCSSCEEEEECTT-----SCHHHHHH
T ss_pred EEEccchheEEecCcCcccceEEEEeccceeeEEEEeccccccCCceEEEEEcCCceEEEEeccCc-----ccHHHHHH
Confidence 34556667777766 577899999999999986633 4999985444 388887775 55666544
No 227
>3qij_A Protein 4.1; cytoskeleton, structural genomics, structural genomics conso SGC; 1.80A {Homo sapiens} PDB: 1gg3_A 3bin_A 2he7_A 2rq1_A
Probab=30.27 E-value=57 Score=29.74 Aligned_cols=43 Identities=14% Similarity=0.231 Sum_probs=35.8
Q ss_pred eeeeeeeccceEEEEEccCCcEEEeeeccceeeecccCCcEEEEe
Q psy6995 168 MHCVLAISTDSVVLVEEQSRDLVFVAPAKSVLGWATSTNSLRLYH 212 (342)
Q Consensus 168 i~ClLGIS~e~lVLIe~~s~~VVFncpc~dVIGWt~s~~~LkIyY 212 (342)
.+++|||+..-|.+.++.++ +...|-.+|..|++..+.+-|=.
T Consensus 217 ~~~~LgV~~~Gi~v~~~~~k--l~~f~w~~I~~~s~~~k~F~i~~ 259 (296)
T 3qij_A 217 VDIILGVCSSGLLVYKDKLR--INRFPWPKVLKISYKRSSFFIKI 259 (296)
T ss_dssp CEEEEEECSSEEEEEETTEE--EEEEEGGGEEEEEEETTEEEEEE
T ss_pred CEEEEEECCCeEEEEeCCCe--EEEEEhhhcCEEEecCCEEEEEE
Confidence 47999999999999999876 67788899999998877655543
No 228
>1n3h_A SHC transforming protein; free protein, beta sandwich, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.2 PDB: 1oy2_A 2l1c_A* 1shc_A*
Probab=28.23 E-value=29 Score=30.89 Aligned_cols=32 Identities=22% Similarity=0.319 Sum_probs=27.9
Q ss_pred eeeeeeeccceEEEEEccCCcEEEeeecccee
Q psy6995 168 MHCVLAISTDSVVLVEEQSRDLVFVAPAKSVL 199 (342)
Q Consensus 168 i~ClLGIS~e~lVLIe~~s~~VVFncpc~dVI 199 (342)
..+.|-||.+.|-|+++.++++++++|=+.|.
T Consensus 120 ~~V~L~IS~~gIkv~d~~t~~~i~~~~i~~IS 151 (207)
T 1n3h_A 120 MPITLTVSTSSLNLMAADCKQIIANHHMQSIS 151 (207)
T ss_dssp EEEEEEEETTEEEEEETTTTSCBCCCSCCCCS
T ss_pred ceEEEEEECCeEEEEeCCCCceeeeeccceEE
Confidence 58999999999999999999998887766554
No 229
>3d8d_A Amyloid beta A4 precursor protein-binding family 1; alpha-beta structure, phosphotyrosine binding domain; 2.20A {Homo sapiens} PDB: 3d8e_A 3d8f_A
Probab=26.94 E-value=66 Score=27.92 Aligned_cols=38 Identities=26% Similarity=0.489 Sum_probs=34.3
Q ss_pred eeeeeeccceEEEEEccCCcEEEeeeccceeeecccCC
Q psy6995 169 HCVLAISTDSVVLVEEQSRDLVFVAPAKSVLGWATSTN 206 (342)
Q Consensus 169 ~ClLGIS~e~lVLIe~~s~~VVFncpc~dVIGWt~s~~ 206 (342)
+-+|-++.++|-|||+.|+..+.++|=..|.=|.....
T Consensus 56 ~~~L~v~~~tlrLvD~~tk~~L~~~pI~~I~f~~~gr~ 93 (148)
T 3d8d_A 56 DLLLQLEDETLKLVEPQSQALLHAQPIISIRVWGVGRD 93 (148)
T ss_dssp EEEEEEETTEEEEECTTTCCEEEEEEGGGCCEEEECCC
T ss_pred eEEEEEcCCeEEEecCCCCceEEEeeEEEEEEEeCCCC
Confidence 56899999999999999999999999999998888644
No 230
>3dxe_A Amyloid beta A4 protein-binding family B member 1; alzheimer'S disease, APP, AICD, Fe65, PTB domain, alternative splicing, polymorphism, alzheimer disease, apoptosis; 2.00A {Homo sapiens} SCOP: b.55.1.0 PDB: 3dxd_A 3dxc_A
Probab=25.90 E-value=87 Score=26.49 Aligned_cols=66 Identities=6% Similarity=0.100 Sum_probs=42.3
Q ss_pred eeeeeeeccceEEEEEccCCcEEEeeeccceeeecccCCcEEEEe-------ecCceEEEEecCCCCCChhhHHHHHH
Q psy6995 168 MHCVLAISTDSVVLVEEQSRDLVFVAPAKSVLGWATSTNSLRLYH-------HQGEVTRIHMREGGGGDRDELMEVVV 238 (342)
Q Consensus 168 i~ClLGIS~e~lVLIe~~s~~VVFncpc~dVIGWt~s~~~LkIyY-------~rGE~i~l~~~e~~~~~~edl~EIV~ 238 (342)
..+.|-||.+.|.++|..+++++.+|+=+.| -|...+..-++|= ++=+|=.+-|... +.+|.+-|+
T Consensus 46 ~~v~l~Vs~~gi~v~~~~t~e~l~~~~i~~I-SFcg~~kd~k~FafI~~~~~~~f~CHvF~c~~~----A~~vs~aV~ 118 (140)
T 3dxe_A 46 TPSHVSVAPATLTILHQQTEAVLGECRVRFL-SFLAVGRDVHTFAFIMAAGPASFCCHMFWCEPN----AASLSEAVQ 118 (140)
T ss_dssp EEEEEEECSSEEEEEETTTCCEEEEEEGGGE-EEEEECSSTTEEEEEEEEETTEEEEEEEEEESC----SHHHHHHHH
T ss_pred ceEEEEEcCCEEEEEecCCcceeeeccEEEE-eeeccCCCCcEEEEEecCCCccEEEEEEecCcc----hHHHHHHHH
Confidence 4699999999999999999999999986653 2222233333331 1223445555443 456666665
No 231
>1s3a_A NADH-ubiquinone oxidoreductase B8 subunit; CI-B8, ndufa2, complex I; NMR {Homo sapiens} SCOP: c.47.1.22
Probab=23.85 E-value=91 Score=24.51 Aligned_cols=35 Identities=11% Similarity=0.096 Sum_probs=28.5
Q ss_pred cCCcEEEEeecCceEEEEecCCCCCChhhHHHHHHhhh
Q psy6995 204 STNSLRLYHHQGEVTRIHMREGGGGDRDELMEVVVRLR 241 (342)
Q Consensus 204 s~~~LkIyY~rGE~i~l~~~e~~~~~~edl~EIV~RL~ 241 (342)
...-|..+|+-|+...+.+.+- +.+||.+.+..|.
T Consensus 64 ~~P~i~a~Y~~G~ek~i~l~n~---s~~eI~~~l~~l~ 98 (102)
T 1s3a_A 64 VQPKLWARYAFGQETNVPLNNF---SADQVTRALENVL 98 (102)
T ss_dssp SSCEEEEEESSCCEEEEECTTC---CHHHHHHHHHHHH
T ss_pred CCCEEEEEECCCCEEEEECCCC---CHHHHHHHHHHHH
Confidence 3567999999999999998886 6788877777763
No 232
>1q5y_A NIKR, nickel responsive regulator; nickel binding, regulatory domain, beta sandwich, metal binding protein; 1.40A {Escherichia coli} SCOP: d.58.18.4 PDB: 3bkt_A 3bkf_A 3bku_A
Probab=23.75 E-value=83 Score=24.07 Aligned_cols=44 Identities=16% Similarity=0.219 Sum_probs=36.4
Q ss_pred cEEEEeecCceEEEEecCCCCCChhhHHHHHHhhhccCCCCCceEEEe
Q psy6995 207 SLRLYHHQGEVTRIHMREGGGGDRDELMEVVVRLRAATPGSPAQELTL 254 (342)
Q Consensus 207 ~LkIyY~rGE~i~l~~~e~~~~~~edl~EIV~RL~~VT~Gcet~El~L 254 (342)
++-+.+++..|+.+-...+ +.++|+++..+|... +|.....+++
T Consensus 37 ~~Hvhld~~~clEvivv~G---~~~~I~~l~~~l~~~-kGV~~~~L~~ 80 (85)
T 1q5y_A 37 TLHVHINHDDCLEIAVLKG---DMGDVQHFADDVIAQ-RGVRHGHLQC 80 (85)
T ss_dssp EEEEECSSSEEEEEEEEEE---EHHHHHHHHHHHHTS-TTCEEEEEEE
T ss_pred EEeeeeCCCcEEEEEEEEc---CHHHHHHHHHHHhcc-CCeEEEeEEE
Confidence 4667888888998888886 889999999999999 8887666653
No 233
>2vv6_A FIXL, sensor protein FIXL; signaling protein, transferase, phosphoprotein, nitrogen FIX PER-ARNT-SIM, metal-binding, PAS, iron, heme; HET: HEM; 1.5A {Bradyrhizobium japonicum} PDB: 1xj6_A* 1xj4_A* 2vv7_A* 2vv8_A* 1lsw_A* 1dp8_A* 1dp9_A* 1drm_A* 1lsv_A* 1dp6_A* 1lsx_A* 1lt0_A* 1y28_A* 2cmn_A* 1xj3_A* 1xj2_A* 2owh_A* 2owj_A*
Probab=20.20 E-value=31 Score=24.71 Aligned_cols=30 Identities=17% Similarity=0.501 Sum_probs=24.2
Q ss_pred ccceEEEEEccCCcEEEeeeccceeeeccc
Q psy6995 175 STDSVVLVEEQSRDLVFVAPAKSVLGWATS 204 (342)
Q Consensus 175 S~e~lVLIe~~s~~VVFncpc~dVIGWt~s 204 (342)
++|.|++++....-+-+|=.+..++||+..
T Consensus 2 ~~d~i~~~d~~g~i~~~N~a~~~l~G~~~~ 31 (119)
T 2vv6_A 2 IPDAMIVIDGHGIIQLFSTAAERLFGWSEL 31 (119)
T ss_dssp CCCEEEEEETTSBEEEECHHHHHHHCCCHH
T ss_pred CcceEEEECCCCeEEEEhHHHHHHhCCCHH
Confidence 467889999777667778888999999865
Done!