RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy6995
(342 letters)
>d1y7na1 b.36.1.1 (A:12-90) Amyloid beta A4 precursor
protein-binding family A member 1 (APBA1, X11) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 79
Score = 52.1 bits (125), Expect = 1e-09
Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 255 KRNGLGQLGFHVQPDGLVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKT 312
+ + QLGF VQ +G++ + G+A + G++ G R+ I +V H+++V +L
Sbjct: 8 RPDLRYQLGFSVQ-NGIICSLMRGGIAERGGVRVGHRIIEINGQSVVATPHEKIVHILSN 66
Query: 313 S-SLVTVTVIPA 323
+ + + +PA
Sbjct: 67 AVGEIHMKTMPA 78
>d1srqa_ e.55.1.1 (A:) Rap1 GTPase-activating protein 1, Rap1GAP
{Human (Homo sapiens) [TaxId: 9606]}
Length = 336
Score = 54.5 bits (131), Expect = 5e-09
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 6/43 (13%)
Query: 17 EHQNWLGMDDNLGPVAISLKREKVEYTQESQQMYRYRLLIRTS 59
EH N+ +D LG + SLK + + RLL+RT
Sbjct: 21 EHFNYYSLDTALGHLVFSLKYDVIG------DQEHLRLLLRTK 57
>d1r6ja_ b.36.1.1 (A:) Syntenin 1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 82
Score = 46.9 bits (111), Expect = 1e-07
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 251 ELTLKRNGLGQLGFHVQPDGLVTEVEHMGLAYQEGLKQGCRLIC--KVAVSTLSHDQMVD 308
+T+ ++ G +GF + +T + A + GL + V L Q+ D
Sbjct: 7 TITMHKDSTGHVGFIFKNGK-ITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIAD 65
Query: 309 LLKTS-SLVTVTVIPA 323
+L TS ++VT+T++PA
Sbjct: 66 ILSTSGTVVTITIMPA 81
>d1kwaa_ b.36.1.1 (A:) Cask/Lin-2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 88
Score = 46.4 bits (110), Expect = 1e-07
Identities = 12/86 (13%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Query: 249 AQELTLKRNGLGQLGFHVQPDG----LVTEVEHMGLAYQEGLKQGCRLICKV---AVSTL 301
++ + ++N +G ++ + +V + H G+ +++G I ++ +V+
Sbjct: 2 SRLVQFQKNTDEPMGITLKMNELNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQ 61
Query: 302 SHDQMVDLLKTSS-LVTVTVIPALSD 326
+ +Q+ +L+ +T ++P+ +
Sbjct: 62 TVEQLQKMLREMRGSITFKIVPSYRE 87
>d1w9ea1 b.36.1.1 (A:110-194) Syntenin 1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 85
Score = 45.6 bits (108), Expect = 3e-07
Identities = 16/76 (21%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Query: 251 ELTLKRNGLGQLGFHVQPDG---LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQ 305
E+ L ++ G++G ++ V V+ A GL+ G ++ I + S D+
Sbjct: 5 EVILCKDQDGKIGLRLKSIDNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDK 64
Query: 306 MVDLLKTSSLVTVTVI 321
+LK + +T+
Sbjct: 65 AHKVLKQAFGEKITMT 80
>d2f5ya1 b.36.1.1 (A:19-95) Regulator of G-protein signaling 3, RGS3
{Human (Homo sapiens) [TaxId: 9606]}
Length = 77
Score = 44.4 bits (105), Expect = 6e-07
Identities = 16/73 (21%), Positives = 31/73 (42%), Gaps = 6/73 (8%)
Query: 253 TLKRNGLGQLGFHVQPDG--LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQMVD 308
T+ R G GF + D V V+ G A + GL+Q + + + V ++
Sbjct: 2 TIPRGKDG-FGFTICCDSPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAH 60
Query: 309 LLKTS-SLVTVTV 320
+++ S + + V
Sbjct: 61 EIRSCPSEIILLV 73
>d1g9oa_ b.36.1.1 (A:) Na+/H+ exchanger regulatory factor, NHERF
{Human (Homo sapiens) [TaxId: 9606]}
Length = 91
Score = 42.1 bits (99), Expect = 5e-06
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 253 TLKRNGLGQLGFHVQPDG-----LVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHDQ 305
L++ G GFH+ + + VE A + GL G RL + V +H Q
Sbjct: 8 CLEKGPNG-YGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQ 66
Query: 306 MVDLLKTS-SLVTVTVIPALSD 326
+V ++ + + V + V+ +D
Sbjct: 67 VVSRIRAALNAVRLLVVDPETD 88
>d1q3oa_ b.36.1.1 (A:) Shank1, PDZ domain {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 104
Score = 42.3 bits (99), Expect = 6e-06
Identities = 16/91 (17%), Positives = 36/91 (39%), Gaps = 21/91 (23%)
Query: 253 TLKRNGLGQLGFHVQ------------------PDGLVTEVEHMGLAYQEGLKQGCRL-- 292
L++ GF ++ + V+ G+A++ GL+ G L
Sbjct: 10 LLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIE 69
Query: 293 ICKVAVSTLSHDQMVDLLKTS-SLVTVTVIP 322
+ V + H Q+V++++ + + V V+
Sbjct: 70 VNGQNVVKVGHRQVVNMIRQGGNTLMVKVVM 100
>d1va8a1 b.36.1.1 (A:8-107) Maguk p55 subfamily member 5 {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 100
Score = 41.4 bits (97), Expect = 1e-05
Identities = 14/85 (16%), Positives = 36/85 (42%), Gaps = 7/85 (8%)
Query: 246 GSPAQELTLKRNGLGQLGFHVQPDG---LVTEVEHMGLAYQEGLKQGCRLICKV---AVS 299
G + + +++ LG V+ + +++ + G A + GL + ++ +
Sbjct: 16 GETVKIVRIEKARDIPLGATVRNEMDSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIR 75
Query: 300 TLSHDQMVDLLKTSS-LVTVTVIPA 323
+++ DLL +T +IP+
Sbjct: 76 GKDVNEVFDLLSDMHGTLTFVLIPS 100
>d1wi2a_ b.36.1.1 (A:) PDZ domain containing protein 11, Pdzk11
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 104
Score = 41.1 bits (96), Expect = 1e-05
Identities = 20/79 (25%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 250 QELTLKRNGLGQLGFHV------QPDGLVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTL 301
+ +TLK+ QLGF++ Q +++V A++ GL++G ++ + V +
Sbjct: 17 RIVTLKKPPGAQLGFNIRGGKASQLGIFISKVIPDSDAHRAGLQEGDQVLAVNDVDFQDI 76
Query: 302 SHDQMVDLLKTSSLVTVTV 320
H + V++LKT+ +++ V
Sbjct: 77 EHSKAVEILKTAREISMRV 95
>d1ueza_ b.36.1.1 (A:) KIAA1526 protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 101
Score = 40.3 bits (94), Expect = 3e-05
Identities = 20/89 (22%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
Query: 242 AATPGSPAQELTLKRNGLGQ-LGFHVQPDG------LVTEVEHMGLAYQEGLKQGCRL-- 292
++ + ++L+R + LGF ++ V+ VE LA +EGL+ G ++
Sbjct: 2 SSGSSGEVRLVSLRRAKAHEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKEGLRVGDQILR 61
Query: 293 ICKVAVSTLSHDQMVDLLKTSSLVTVTVI 321
+ +++ ++H + V LK S + ++V
Sbjct: 62 VNDKSLARVTHAEAVKALKGSKKLVLSVY 90
>d1x5na1 b.36.1.1 (A:8-108) Harmonin {Human (Homo sapiens) [TaxId:
9606]}
Length = 101
Score = 40.3 bits (94), Expect = 3e-05
Identities = 20/82 (24%), Positives = 44/82 (53%), Gaps = 8/82 (9%)
Query: 250 QELTLKRNGLGQLGFHV-----QPDGL-VTEVEHMGLAYQEGLKQGCRL--ICKVAVSTL 301
+++ + G LG + Q G+ ++ V+ L+ + GL+ G ++ + V S L
Sbjct: 10 KKVFISLVGSRGLGCSISSGPIQKPGIFISHVKPGSLSAEVGLEIGDQIVEVNGVDFSNL 69
Query: 302 SHDQMVDLLKTSSLVTVTVIPA 323
H + V++LK+S +T++++ A
Sbjct: 70 DHKEAVNVLKSSRSLTISIVAA 91
>d1p1da2 b.36.1.1 (A:115-213) Glutamate receptor interacting protein
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 99
Score = 39.5 bits (92), Expect = 5e-05
Identities = 16/91 (17%), Positives = 40/91 (43%), Gaps = 12/91 (13%)
Query: 242 AATPGSPAQELTLKRNGLGQLGFHVQPDG--------LVTEVEHMGLAYQEG-LKQGCRL 292
+ P S + L + +LG + ++++++ +A++ G L+ G +L
Sbjct: 4 SVIPSSGTFHVKLPKKHSVELGITISSPSSRKPGDPLVISDIKKGSVAHRTGTLELGDKL 63
Query: 293 --ICKVAVSTLSHDQMVDLLKTSS-LVTVTV 320
I + + + S + V +L+ LV + +
Sbjct: 64 LAIDNIRLDSCSMEDAVQILQQCEDLVKLKI 94
>d1vaea_ b.36.1.1 (A:) Rhophilin-2 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 111
Score = 39.6 bits (92), Expect = 5e-05
Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 7/87 (8%)
Query: 241 RAATPGSPAQELTLKRNGLGQLGFHVQPDG--LVTEVEHMGLAYQEGLKQGCRL--ICKV 296
A+ SP + + G LGF ++ + V ++ A G K+G + I V
Sbjct: 8 SASKRWSPPRGIHFTVEE-GDLGFTLRGNTPVQVHFLDPHCSASLAGAKEGDYIVSIQGV 66
Query: 297 AVSTLSHDQMVDLLKTS--SLVTVTVI 321
L+ +++ LLK+ V + V+
Sbjct: 67 DCKWLTVSEVMKLLKSFGGEEVEMKVV 93
>d1uita_ b.36.1.1 (A:) Discs large 5 protein KIAA0583 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 117
Score = 39.6 bits (92), Expect = 8e-05
Identities = 17/101 (16%), Positives = 38/101 (37%), Gaps = 17/101 (16%)
Query: 227 GGDRDELMEVVVRLRAATPGSPAQELTLKRNGLGQLGFHVQPDG----LVTEVEHMGLAY 282
GG+R + V R + +++ LG + V++V +A+
Sbjct: 7 GGERRKDRPYVEEPR---------HVKVQKGSEP-LGISIVSGEKGGIYVSKVTVGSIAH 56
Query: 283 QEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTS-SLVTVTV 320
Q GL+ G +L + + + + Q ++ +T+
Sbjct: 57 QAGLEYGDQLLEFNGINLRSATEQQARLIIGQQCDTITILA 97
>d1x5ra1 b.36.1.1 (A:8-106) Glutamate receptor interacting protein
2, GRIP2 (KIAA1719) {Human (Homo sapiens) [TaxId: 9606]}
Length = 99
Score = 38.7 bits (90), Expect = 1e-04
Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 16/87 (18%)
Query: 250 QELTLKRNGLGQLGFHVQPDG----------LVTEVEHMGLAYQEG-LKQGCRL--ICKV 296
E+ L + L G +Q LV +E A + G L+ G R+ I +
Sbjct: 10 TEVVLCGDPLSGFGLQLQGGIFATETLSSPPLVCFIEPDSPAERCGLLQVGDRVLSINGI 69
Query: 297 AVSTLSHDQMVDLLKTSSL---VTVTV 320
A + ++ LL+ ++L V + V
Sbjct: 70 ATEDGTMEEANQLLRDAALAHKVVLEV 96
>d2cs5a1 b.36.1.1 (A:8-113) Tyrosine-protein phosphatase
non-receptor type 4, PTPN4 {Human (Homo sapiens) [TaxId:
9606]}
Length = 106
Score = 38.4 bits (89), Expect = 2e-04
Identities = 20/96 (20%), Positives = 38/96 (39%), Gaps = 15/96 (15%)
Query: 242 AATPGSPAQELTLKRNGLGQLGFHVQ------PDGLVTEVEHMGLAYQ--EGLKQGCRL- 292
P + +K + G+ GF+V+ +V+ V A L +G ++
Sbjct: 2 GGIPHDNLVLIRMKPDENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVV 61
Query: 293 -ICKVAVSTLSHDQMVDLLKTS-----SLVTVTVIP 322
I ++ +HDQ+V +K S + + V P
Sbjct: 62 LINGRDIAEHTHDQVVLFIKASCERHSGELMLLVRP 97
>d1uf1a_ b.36.1.1 (A:) KIAA1526 protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 128
Score = 38.4 bits (89), Expect = 2e-04
Identities = 28/124 (22%), Positives = 49/124 (39%), Gaps = 15/124 (12%)
Query: 225 GGGGDRDELMEVVVRLRAATPGSPAQELTLKRNGLGQLGFHVQ-----PDGL-VTEVEHM 278
G GDR + ++ G +++ L LG ++ G+ +T V+
Sbjct: 4 GSSGDRRSTLHLL-------QGGDEKKVNLVLGDGRSLGLTIRGGAEYGLGIYITGVDPG 56
Query: 279 GLAYQEGLKQGCRL--ICKVAVSTLSHDQMVDLLKTSSLVTVTVIPALSDGTPRRYADLK 336
A GLK G ++ + + + HD+ V LLK+S + +TV R D
Sbjct: 57 SEAEGSGLKVGDQILEVNGRSFLNILHDEAVRLLKSSRHLILTVKDVGRLPHARTTVDET 116
Query: 337 MWRS 340
W +
Sbjct: 117 KWIA 120
>d1ihja_ b.36.1.1 (A:) Inad {Fruit fly (Drosophila melanogaster)
[TaxId: 7227]}
Length = 94
Score = 37.6 bits (87), Expect = 2e-04
Identities = 11/87 (12%), Positives = 27/87 (31%), Gaps = 16/87 (18%)
Query: 250 QELTLKRNGLGQLGFHVQ------------PDGLVTEVEHMGLAYQEGLKQGCRLICKV- 296
+TL + G G + + + A+ G + I +
Sbjct: 5 HMVTLDKTGKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLN 64
Query: 297 --AVSTLSHDQMVDLLKTS-SLVTVTV 320
V + ++DL+K + + + +
Sbjct: 65 GKDVRNSTEQAVIDLIKEADFKIELEI 91
>d2fnea1 b.36.1.1 (A:1955-2042) Multiple PDZ domain protein {Human
(Homo sapiens) [TaxId: 9606]}
Length = 88
Score = 37.1 bits (86), Expect = 3e-04
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 14/85 (16%)
Query: 250 QELTLKRNGLGQLGFHV-----QPDG----LVTEVEHMGLAYQEGLKQ-GCRL--ICKVA 297
+ +TL+R G LGF + P G V V G A ++G + G ++ + +
Sbjct: 4 KSITLERGPDG-LGFSIVGGYGSPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQS 62
Query: 298 VSTLSHDQMVDLLKTS-SLVTVTVI 321
+ ++H++ V +LK + VT+ V+
Sbjct: 63 LEGVTHEEAVAILKRTKGTVTLMVL 87
>d1x5qa1 b.36.1.1 (A:8-104) Scribble (KIAA0147) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 97
Score = 37.2 bits (86), Expect = 3e-04
Identities = 20/85 (23%), Positives = 38/85 (44%), Gaps = 16/85 (18%)
Query: 251 ELTLKRNGLGQLGFHVQ-----------PDGL-VTEVEHMGLAYQEGLKQGCRL--ICKV 296
LT+ R G LG + +G+ ++ V G A + G++ G +L + V
Sbjct: 11 TLTILRQTGG-LGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGV 69
Query: 297 AVSTLSHDQMVDLLKTS-SLVTVTV 320
A+ H + V+ L+ + + V + V
Sbjct: 70 ALQGAEHHEAVEALRGAGTAVQMRV 94
>d1uepa_ b.36.1.1 (A:) Membrane associated guanylate kinase
inverted-2 (MAGI-2, KIAA0705) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 103
Score = 37.2 bits (86), Expect = 4e-04
Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 13/91 (14%)
Query: 242 AATPGSPAQELTLKRNGLGQLGFHVQ------PDGLVTEVEHMGLAYQEG-LKQGCRL-- 292
+ + G ++ L+R G GF + L+ V MG A ++G L G L
Sbjct: 3 SGSSGYKELDVHLRRMESG-FGFRILGGDEPGQPILIGAVIAMGSADRDGRLHPGDELVY 61
Query: 293 ICKVAVSTLSHDQMVDLLKTS---SLVTVTV 320
+ + V+ +H ++DL+ + V +TV
Sbjct: 62 VDGIPVAGKTHRYVIDLMHHAARNGQVNLTV 92
>d1n7ea_ b.36.1.1 (A:) Glutamate receptor-interacting protein 1,
GRIP1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 95
Score = 36.8 bits (85), Expect = 4e-04
Identities = 19/87 (21%), Positives = 37/87 (42%), Gaps = 11/87 (12%)
Query: 246 GSPAQELTLKRNGLGQLGFHVQPDG------LVTEVEHMGLAYQEG-LKQGCRL--ICKV 296
G+ + LKR G G LG + +++ + GLA + G + G R+ I
Sbjct: 1 GAIIYTVELKRYG-GPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSS 59
Query: 297 AVSTLSHDQMVDLLKTS-SLVTVTVIP 322
++ + + LL+ + VT+ +
Sbjct: 60 SLKGKPLSEAIHLLQMAGETVTLKIKK 86
>d1qava_ b.36.1.1 (A:) Syntrophin {Mouse (Mus musculus) [TaxId:
10090]}
Length = 90
Score = 36.0 bits (83), Expect = 8e-04
Identities = 16/81 (19%), Positives = 33/81 (40%), Gaps = 10/81 (12%)
Query: 250 QELTLKRNGLGQLGFHV-----QPDGL-VTEVEHMGLAYQEGLKQGCRLICKV---AVST 300
+ +T+++ G LG + + ++++ A Q I V +S+
Sbjct: 6 RRVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSS 65
Query: 301 LSHDQMVDLLKTS-SLVTVTV 320
+HD+ V LK + V + V
Sbjct: 66 ATHDEAVQALKKTGKEVVLEV 86
>d1vb7a_ b.36.1.1 (A:) PDZ-LIM protein mystique {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 94
Score = 36.1 bits (83), Expect = 8e-04
Identities = 17/83 (20%), Positives = 32/83 (38%), Gaps = 9/83 (10%)
Query: 247 SPAQELTLKRNGLGQLGFHVQ------PDGLVTEVEHMGLAYQEGLKQGCRL--ICKVAV 298
S + LT+ G GF + +VT+V G A L+ G + I +
Sbjct: 3 SGSSGLTVDVAGPAPWGFRISGGRDFHTPIIVTKVTERGKAEAADLRPGDIIVAINGQSA 62
Query: 299 STLSHDQMVDLLKTS-SLVTVTV 320
+ H + ++ S S + + +
Sbjct: 63 ENMLHAEAQSKIRQSASPLRLQL 85
>d1rzxa_ b.36.1.1 (A:) GTPase-binding domain of the cell polarity
protein par6 (Par-6B) {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 98
Score = 36.1 bits (83), Expect = 0.001
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 19/89 (21%)
Query: 254 LKRNGLGQLGFHVQ--------PDGL-------VTEVEHMGLAYQEGLKQGCRLICKV-- 296
LK LGF+++ GL ++ + GLA GL + +V
Sbjct: 9 LKHGSDKPLGFYIRDGTSVRVTASGLEKQPGIFISRLVPGGLAESTGLLAVNDEVIEVNG 68
Query: 297 -AVSTLSHDQMVDLLKTS-SLVTVTVIPA 323
V+ + DQ+ D++ + S + +TV PA
Sbjct: 69 IEVAGKTLDQVTDMMVANSSNLIITVKPA 97
>d1x45a1 b.36.1.1 (A:8-92) Amyloid beta A4 precursor protein-binding
family A member 1 (APBA1, X11) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 85
Score = 35.6 bits (82), Expect = 0.001
Identities = 12/85 (14%), Positives = 30/85 (35%), Gaps = 14/85 (16%)
Query: 251 ELTLKRNGLGQLGFHVQPDG--------LVTEVEHMGLAYQEGLKQGCRLICKV---AVS 299
++ +++ LG + G ++ + H G A + G I + ++
Sbjct: 1 DVFIEKQKGEILGVVIVESGWGSILPTVIIANMMHGGPAEKSGKLNIGDQIMSINGTSLV 60
Query: 300 TLSHDQMVDLLK---TSSLVTVTVI 321
L ++K S V + ++
Sbjct: 61 GLPLSTCQSIIKGLKNQSRVKLNIV 85
>d2cssa1 b.36.1.1 (A:8-115) Regulating synaptic membrane exocytosis
protein 1, RIMS1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 108
Score = 35.7 bits (82), Expect = 0.001
Identities = 15/86 (17%), Positives = 34/86 (39%), Gaps = 15/86 (17%)
Query: 250 QELTLKRNGLGQLGFHV-----QPDG----LVTEVEHMGLAYQEG-LKQGCRL--ICKVA 297
+ T+ ++ LG V G +T+V+ LA G L+ G +
Sbjct: 20 KRTTMPKDSGALLGLKVVGGKMTDLGRLGAFITKVKKGSLADVVGHLRAGDEVLEWNGKP 79
Query: 298 VSTLSHDQMVDLLKTSS---LVTVTV 320
+ +++++ +++ S V + V
Sbjct: 80 LPGATNEEVYNIILESKSEPQVEIIV 105
>d1v5qa_ b.36.1.1 (A:) Glutamate receptor interacting protein {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 122
Score = 35.8 bits (82), Expect = 0.002
Identities = 15/85 (17%), Positives = 31/85 (36%), Gaps = 14/85 (16%)
Query: 250 QELTLKRNGLGQLGFHVQ----------PDGLVTEVEHMGLAYQEGLKQGCRLICKV--- 296
E+ L + + G +Q L++ +E A + G+ Q + +
Sbjct: 17 TEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGI 76
Query: 297 AVSTLSHDQMVDLLKTSS-LVTVTV 320
+ ++ LL+ SS VT+
Sbjct: 77 PTEDSTFEEANQLLRDSSITSKVTL 101
>d1x6da1 b.36.1.2 (A:8-114) Interleukin 16 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 107
Score = 34.9 bits (80), Expect = 0.002
Identities = 17/82 (20%), Positives = 28/82 (34%), Gaps = 10/82 (12%)
Query: 250 QELTLKRNGLGQLGFHVQ-----PDG--LVTEVEHMGLAYQEGLKQGCRLI---CKVAVS 299
L + LGF + + V V GLA QEG Q + ++
Sbjct: 10 HVTILHKEEGAGLGFSLAGGADLENKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLK 69
Query: 300 TLSHDQMVDLLKTSSLVTVTVI 321
+H + +L+ + VI
Sbjct: 70 GTTHHDALAILRQAREPRQAVI 91
>d1qaua_ b.36.1.1 (A:) Neuronal nitric oxide synthase, NNOS {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 112
Score = 35.1 bits (80), Expect = 0.002
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 8/79 (10%)
Query: 251 ELTLKRNGLGQLGFHVQPDG-----LVTEVEHMGLAYQEGLKQGCRLICKV---AVSTLS 302
+ L + +G LGF V+ +++++ G A Q GL Q +I V + LS
Sbjct: 4 SVRLFKRKVGGLGFLVKERVSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLS 63
Query: 303 HDQMVDLLKTSSLVTVTVI 321
+D +++L+ + T V+
Sbjct: 64 YDSALEVLRGIASETHVVL 82
>d1rgra_ b.36.1.1 (A:) Synaptic protein PSD-95 {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 93
Score = 34.5 bits (79), Expect = 0.003
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 16/86 (18%)
Query: 250 QELTLKRNGLGQLGFHV-----------QPDGLVTEVEHMGLAYQEGLKQGC---RLICK 295
+E+TL+R G LGF + P +T++ G A Q+G + + +
Sbjct: 3 EEITLERGNSG-LGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNE 61
Query: 296 VAVSTLSHDQMVDLLKTS-SLVTVTV 320
V V ++H V+ LK + S+V + V
Sbjct: 62 VDVREVTHSAAVEALKEAGSIVRLYV 87
>d1wfva_ b.36.1.1 (A:) Membrane associated guanylate kinase
inverted-2 (MAGI-2, KIAA0705) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 103
Score = 34.5 bits (79), Expect = 0.003
Identities = 17/93 (18%), Positives = 39/93 (41%), Gaps = 16/93 (17%)
Query: 243 ATPGSPAQEL-----TLKRNGLGQLGFHVQ-----PDGL-VTEVEHMGLAYQEGL-KQGC 290
+ GS Q+ +++ G GF ++ L V + G A + G + G
Sbjct: 1 GSSGSSGQDFDYFTVDMEKGAKG-FGFSIRGGREYKMDLYVLRLAEDGPAIRNGRMRVGD 59
Query: 291 RL--ICKVAVSTLSHDQMVDLLKTS-SLVTVTV 320
++ I + ++H + ++L+K+ V + +
Sbjct: 60 QIIEINGESTRDMTHARAIELIKSGGRRVRLLL 92
>d2csja1 b.36.1.1 (A:8-111) Tight junction protein ZO-2, Tjp2 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 104
Score = 34.5 bits (79), Expect = 0.004
Identities = 14/85 (16%), Positives = 31/85 (36%), Gaps = 16/85 (18%)
Query: 251 ELTLKRNGLGQLGFHVQ------------PDGLVTEVEHMGLAYQEGLKQGCRL--ICKV 296
+TL+++ G V ++++V G A L++ R+ +
Sbjct: 10 TVTLQKDSKRGFGIAVSGGRDNPHFENGETSIVISDVLPGGPADG-LLQENDRVVMVNGT 68
Query: 297 AVSTLSHDQMVDLLKTS-SLVTVTV 320
+ + H V L+ S + + V
Sbjct: 69 PMEDVLHSFAVQQLRKSGKIAAIVV 93
>d1wg6a_ b.36.1.1 (A:) Partitioning-defective 3-like protein, PAR3-L
(RIKEN cDNA 2810455b10) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 127
Score = 34.3 bits (78), Expect = 0.005
Identities = 14/83 (16%), Positives = 35/83 (42%), Gaps = 13/83 (15%)
Query: 251 ELTLKRNGLGQLGFHVQPDG----------LVTEVEHMGLAYQEG-LKQGCRL--ICKVA 297
E+ L +G LG ++ + + + H G A+++G L+ +L +
Sbjct: 28 EIPLNDSGSAGLGVSLKGNKSRETGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGET 87
Query: 298 VSTLSHDQMVDLLKTSSLVTVTV 320
+ S+ + ++ L+ S + +
Sbjct: 88 LLGKSNHEAMETLRRSMSMEGNI 110
>d1rgwa_ b.36.1.1 (A:) Zasp (Cypher, Oracle 1) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 85
Score = 33.3 bits (76), Expect = 0.006
Identities = 16/77 (20%), Positives = 34/77 (44%), Gaps = 9/77 (11%)
Query: 253 TLKRNGLGQLGFHVQ------PDGLVTEVEHMGLAYQEGLKQGCRL--ICKVAVSTLSHD 304
++ G G GF +Q ++ + A Q L QG + I V T++H
Sbjct: 4 SVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHL 63
Query: 305 QMVDLLKTS-SLVTVTV 320
+ + +K++ +++T+
Sbjct: 64 EAQNKIKSASYNLSLTL 80
>d1tp5a1 b.36.1.1 (A:302-403) Synaptic protein PSD-95 {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 102
Score = 33.3 bits (76), Expect = 0.008
Identities = 19/85 (22%), Positives = 32/85 (37%), Gaps = 11/85 (12%)
Query: 245 PGSPAQELTLKRNGLGQLGFHV-----QPDGLVTEVEHMGLAYQEGLKQGCRLICKV--- 296
P P + + + R G LGF++ ++ + G A G + I V
Sbjct: 7 PREP-RRIVIHRGSTG-LGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGV 64
Query: 297 AVSTLSHDQMVDLLKTS-SLVTVTV 320
+ SH+Q LK + VT+
Sbjct: 65 DLRNASHEQAAIALKNAGQTVTIIA 89
>d1ueqa_ b.36.1.1 (A:) Membrane associated guanylate kinase
inverted-2 (MAGI-2, KIAA0705) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 123
Score = 33.8 bits (77), Expect = 0.009
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 13/82 (15%)
Query: 251 ELTLKRNGLGQLGFHV----QPDG--LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTL 301
TLK++ +G GF + +PD V V G A Q+G ++ G + I +V V
Sbjct: 22 STTLKKSNMG-FGFTIIGGDEPDEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGH 80
Query: 302 SHDQMVDLLKTS---SLVTVTV 320
+H +V L ++ V + +
Sbjct: 81 THADVVKLFQSVPIGQSVNLVL 102
>d2f0aa1 b.36.1.1 (A:251-342) Segment polarity protein dishevelled
homolog Dvl-2 {African clawed frog (Xenopus laevis)
[TaxId: 8355]}
Length = 92
Score = 32.9 bits (75), Expect = 0.009
Identities = 16/83 (19%), Positives = 31/83 (37%), Gaps = 15/83 (18%)
Query: 253 TLKRNGLGQLGFHV------QPDG--LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTL 301
TL LG + + DG + + G +G ++ G L + + +
Sbjct: 6 TLNMEKYNFLGISIVGQSNERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDINFENM 65
Query: 302 SHDQMVDLLK----TSSLVTVTV 320
S+D V +L+ + +TV
Sbjct: 66 SNDDAVRVLRDIVHKPGPIVLTV 88
>d1ufxa_ b.36.1.1 (A:) KIAA1526 protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 103
Score = 33.0 bits (75), Expect = 0.009
Identities = 15/98 (15%), Positives = 35/98 (35%), Gaps = 15/98 (15%)
Query: 246 GSPAQELTLKRNGLGQLGFHV-------QPDGLVTEVEHMGLAYQEG-LKQGCRL--ICK 295
GS + +K++ LG + QP + ++ G A+ G LK G + +
Sbjct: 4 GSSGTLVRVKKSAAT-LGIAIEGGANTRQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNG 62
Query: 296 VAVSTLSHDQMVDLLKTS----SLVTVTVIPALSDGTP 329
+ + H + ++ + + + + P
Sbjct: 63 LTLRGKEHREAARIIAEAFKTKDRDYIDFLVTEFNSGP 100
>d1v62a_ b.36.1.1 (A:) Glutamate receptor interacting protein 2,
GRIP2 (KIAA1719) {Human (Homo sapiens) [TaxId: 9606]}
Length = 117
Score = 33.1 bits (75), Expect = 0.013
Identities = 13/101 (12%), Positives = 31/101 (30%), Gaps = 11/101 (10%)
Query: 242 AATPGSPAQELTLKRNGLGQLGFHVQPDG-------LVTEVEHMGLAYQEG-LKQGCRLI 293
S + + + LG + + ++ + + G L G ++
Sbjct: 9 TVANASGPLMVEIVKTPGSALGISLTTTSLRNKSVITIDRIKPASVVDRSGALHPGDHIL 68
Query: 294 C--KVAVSTLSHDQMVDLLKTS-SLVTVTVIPALSDGTPRR 331
++ S + LL + V + ++P P R
Sbjct: 69 SIDGTSMEHCSLLEATKLLASISEKVRLEILPVPQSQRPLR 109
>d1ujua_ b.36.1.1 (A:) Scribble (KIAA0147) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 111
Score = 32.7 bits (74), Expect = 0.016
Identities = 22/104 (21%), Positives = 43/104 (41%), Gaps = 19/104 (18%)
Query: 243 ATPGSPAQELTLKRNGLGQLGFHV---------------QPDGLVTEVEHMGLAYQEG-L 286
+ G +EL +++ +LG + +++V G A ++G L
Sbjct: 4 GSSGPGLRELCIQKAPGERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRL 63
Query: 287 KQGCRL--ICKVAVSTLSHDQMVDLLK-TSSLVTVTVIPALSDG 327
+ G RL + + ++ L+H + V LL+ +TV V G
Sbjct: 64 RVGLRLLEVNQQSLLGLTHGEAVQLLRSVGDTLTVLVCDGFESG 107
>d1ujva_ b.36.1.1 (A:) Membrane associated guanylate kinase
inverted-2 (MAGI-2, KIAA0705) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 96
Score = 32.2 bits (73), Expect = 0.019
Identities = 22/88 (25%), Positives = 37/88 (42%), Gaps = 11/88 (12%)
Query: 243 ATPGSPAQ----ELTLKRNGLGQLGFHVQPDGLVTEVEHMGLAYQE-GLKQGCRL--ICK 295
+ GS Q LT+ + G GF + V+ + GL +G + I +
Sbjct: 1 GSSGSSGQAELMTLTIVKGAQG-FGFTIADSPTGQRVKQILDIQGCPGLCEGDLIVEINQ 59
Query: 296 VAVSTLSHDQMVDLLKTS---SLVTVTV 320
V LSH ++VD+LK S ++ +
Sbjct: 60 QNVQNLSHTEVVDILKDCPIGSETSLII 87
>d1uewa_ b.36.1.1 (A:) Membrane associated guanylate kinase
inverted-2 (MAGI-2, KIAA0705) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 114
Score = 32.3 bits (73), Expect = 0.024
Identities = 13/89 (14%), Positives = 29/89 (32%), Gaps = 17/89 (19%)
Query: 251 ELTLKRNGLGQLGFHVQ-------------PDGLVTEVEHMGLAYQEGLKQGCRLI---C 294
++ + R GF + + + A + + I
Sbjct: 13 DVVIHRKENEGFGFVIISSLNRPESGSTITVPHKIGRIIDGSPADRCAKLKVGDRILAVN 72
Query: 295 KVAVSTLSHDQMVDLLKTS-SLVTVTVIP 322
++ + H +V L+K + VT+ +IP
Sbjct: 73 GQSIINMPHADIVKLIKDAGLSVTLRIIP 101
>d1wf8a1 b.36.1.1 (A:8-101) Neurabin-i {Human (Homo sapiens) [TaxId:
9606]}
Length = 94
Score = 31.4 bits (71), Expect = 0.030
Identities = 13/86 (15%), Positives = 34/86 (39%), Gaps = 17/86 (19%)
Query: 251 ELTLKRNGLGQLGFHVQPDG------------LVTEVEHMGLAYQEG-LKQGCRL--ICK 295
+ L+++ G LG + G V V G A ++G ++ ++ +
Sbjct: 5 PVELEKDEDG-LGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDG 63
Query: 296 VAVSTLSHDQMVDLLK-TSSLVTVTV 320
+++ ++ + +L+ T V +
Sbjct: 64 ISLVGVTQNFAATVLRNTKGNVRFVI 89
>d2fcfa1 b.36.1.1 (A:1148-1243) Multiple PDZ domain protein {Human
(Homo sapiens) [TaxId: 9606]}
Length = 96
Score = 31.4 bits (71), Expect = 0.034
Identities = 17/90 (18%), Positives = 32/90 (35%), Gaps = 19/90 (21%)
Query: 250 QELTLKRNGLGQLGFHV---------------QPDGLVTEVEHMGLAYQEG-LKQGCRL- 292
+ + L R LG + + V A + G LK G R+
Sbjct: 3 RRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIV 62
Query: 293 -ICKVAVSTLSHDQMVDLLKTS-SLVTVTV 320
+ + + SH+Q V+ ++ + + V V
Sbjct: 63 EVDGMDLRDASHEQAVEAIRKAGNPVVFMV 92
>d1wf7a_ b.36.1.1 (A:) Enigma homolog ENH {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 103
Score = 31.5 bits (71), Expect = 0.039
Identities = 14/84 (16%), Positives = 34/84 (40%), Gaps = 9/84 (10%)
Query: 246 GSPAQELTLKRNGLGQLGFHVQ------PDGLVTEVEHMGLAYQEGLKQGCRL--ICKVA 297
GS ++ G GF +Q ++ ++ G A Q ++ G + I ++
Sbjct: 1 GSSGSSGSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKASQAHVRIGDVVLSIDGIS 60
Query: 298 VSTLSHDQMVDLLKTS-SLVTVTV 320
++H + + +K + +T+
Sbjct: 61 AQGMTHLEAQNKIKACTGSLNMTL 84
>d1whaa_ b.36.1.1 (A:) Scribble (KIAA0147) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 105
Score = 31.5 bits (71), Expect = 0.043
Identities = 21/85 (24%), Positives = 33/85 (38%), Gaps = 17/85 (20%)
Query: 252 LTLKRNGLGQLGFHVQ------------PDGLVTEVEHMGLAYQEGLKQ-GCRL--ICKV 296
L R+ G LGF + V+ + G A++ G Q G R+ I V
Sbjct: 11 ACLARSERG-LGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGV 69
Query: 297 AVSTLSHDQMVDLLKTS-SLVTVTV 320
V+ HD V LL + + + +
Sbjct: 70 DVTEARHDHAVSLLTAASPTIALLL 94
>d2h3la1 b.36.1.1 (A:1310-1412) Erbin {Human (Homo sapiens) [TaxId:
9606]}
Length = 103
Score = 31.4 bits (71), Expect = 0.043
Identities = 20/88 (22%), Positives = 35/88 (39%), Gaps = 18/88 (20%)
Query: 250 QELTLKRNGLGQLGFHVQ--------------PDGLVTEVEHMGLAYQEGLKQGCRL--I 293
QE+ ++ +LGF + VT V+ G A + L+ G ++
Sbjct: 11 QEIRVRVEKDPELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-LLQPGDKIIQA 69
Query: 294 CKVAVSTLSHDQMVDLLKTS-SLVTVTV 320
+ + H Q V LLKT + V + +
Sbjct: 70 NGYSFINIEHGQAVSLLKTFQNTVELII 97
>d1ozia_ b.36.1.1 (A:) Phosphatase hPTP1e {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 99
Score = 31.1 bits (70), Expect = 0.051
Identities = 18/88 (20%), Positives = 35/88 (39%), Gaps = 19/88 (21%)
Query: 251 ELTLKRNGLGQLGFHVQPDG--------------LVTEVEHMGLAYQEG-LKQGCRL--I 293
E+ L + G LG V V + G A +G + +G R+ +
Sbjct: 7 EVELAKTD-GSLGISVTVLFDKGGVNTSVRHGGIYVKAIIPKGAAESDGRIHKGDRVLAV 65
Query: 294 CKVAVSTLSHDQMVDLLKTS-SLVTVTV 320
V++ +H Q V+ L+ + +V + +
Sbjct: 66 NGVSLEGATHKQAVETLRNTGQVVHLLL 93
>d2fe5a1 b.36.1.1 (A:223-314) Synapse-associated protein 102 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 92
Score = 30.7 bits (69), Expect = 0.057
Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 16/85 (18%)
Query: 251 ELTLKRNGLGQLGFHV-----------QPDGLVTEVEHMGLAYQEGL-KQGCRL--ICKV 296
E+ L + G LGF + +T++ G A ++G + G RL +
Sbjct: 4 EVNLLKGPKG-LGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNT 62
Query: 297 AVSTLSHDQMVDLLKTS-SLVTVTV 320
+ + H++ V LK + +V + V
Sbjct: 63 NLQDVRHEEAVASLKNTSDMVYLKV 87
>d1um1a_ b.36.1.1 (A:) Hypothetical protein KIAA1849 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 110
Score = 31.1 bits (70), Expect = 0.064
Identities = 16/83 (19%), Positives = 31/83 (37%), Gaps = 14/83 (16%)
Query: 251 ELTLKRNGLGQLGFHV---------QPDGLVTEVEHMGLAYQEG-LKQGCRL--ICKVAV 298
+ L+R G LG + P + + A +G L G R+ + ++
Sbjct: 11 TVELERGPSG-LGMGLIDGMHTHLGAPGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSL 69
Query: 299 STLSHDQMVDLLKTS-SLVTVTV 320
L + + VDL++ + V
Sbjct: 70 LGLGYLRAVDLIRHGGKKMRFLV 92
>d1ky9b2 b.36.1.4 (B:359-446) Protease Do (DegP, HtrA), C-terminal
domains {Escherichia coli [TaxId: 562]}
Length = 88
Score = 30.2 bits (68), Expect = 0.083
Identities = 14/68 (20%), Positives = 29/68 (42%), Gaps = 6/68 (8%)
Query: 260 GQLGFHVQPDG-----LVTEVEHMGLAYQEGLKQGCRLICKVAVSTLSHDQMVDLLKTS- 313
G G + G +V V+ A Q GLK+G +I + + ++ +L +
Sbjct: 12 GIEGAEMSNKGKDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNIAELRKVLDSKP 71
Query: 314 SLVTVTVI 321
S++ + +
Sbjct: 72 SVLALNIQ 79
>d1i16a_ b.36.1.2 (A:) Interleukin 16 {Human (Homo sapiens) [TaxId:
9606]}
Length = 130
Score = 30.8 bits (69), Expect = 0.090
Identities = 15/92 (16%), Positives = 37/92 (40%), Gaps = 13/92 (14%)
Query: 242 AATPGSPAQELTLKRNGLGQLGFHVQ-----PDG----LVTEVEHMGLAYQEG-LKQGCR 291
+T + +TL++ G LGF ++ G + + + Q ++ G
Sbjct: 23 ESTAEATVCTVTLEKMSAG-LGFSLEGGKGSLHGDKPLTINRIFKGAASEQSETVQPGDE 81
Query: 292 LI--CKVAVSTLSHDQMVDLLKTSSLVTVTVI 321
++ A+ L+ + +++K VT++
Sbjct: 82 ILQLGGTAMQGLTRFEAWNIIKALPDGPVTIV 113
>d1wh1a_ b.36.1.1 (A:) Hypothetical protein KIAA1095 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 124
Score = 30.3 bits (68), Expect = 0.11
Identities = 14/82 (17%), Positives = 36/82 (43%), Gaps = 10/82 (12%)
Query: 250 QELTL-KRNGLGQLGFHVQPDG--------LVTEVEHMGLAYQ-EGLKQGCRLICKVAVS 299
+E+ L + N +LG V ++E++ +A + +++G R+I +
Sbjct: 21 EEVDLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIE 80
Query: 300 TLSHDQMVDLLKTSSLVTVTVI 321
+ ++ V LL + +++
Sbjct: 81 VQNREEAVALLTSEENKNFSLL 102
>d1wi4a1 b.36.1.1 (A:8-103) Syntaxin binding protein 4 {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 96
Score = 29.9 bits (67), Expect = 0.12
Identities = 18/88 (20%), Positives = 37/88 (42%), Gaps = 18/88 (20%)
Query: 250 QELTLKRNGLGQLGFHVQ-----PDG---LVTEVEHMGLAYQEG-LKQGCRL--ICKVAV 298
+ +T+ + LG + +G + EV G Y++G LK G +L I K ++
Sbjct: 10 RVITVTKET--GLGLKILGGINRNEGPLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESM 67
Query: 299 STLSHDQMVDLLKTSSL-----VTVTVI 321
+S ++ ++ + L + I
Sbjct: 68 IGVSFEEAKSIITRAKLRSESPWEIAFI 95
>d1uhpa_ b.36.1.1 (A:) Hypothetical protein KIAA1095 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 107
Score = 29.9 bits (67), Expect = 0.14
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 21/98 (21%)
Query: 244 TPGSPAQELT--LKRNGLGQLGFHV--------QPDG------LVTEVEHMGLAYQEG-L 286
+ GS + LT L R+ LGF++ DG V+++ G A +EG L
Sbjct: 2 SSGSSGKSLTLVLHRDSGS-LGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGGL 60
Query: 287 KQGCRLIC--KVAVSTLSHDQMVDLLKTS-SLVTVTVI 321
+ R+I +S +HDQ V+ KT+ + V V+
Sbjct: 61 QIHDRIIEVNGRDLSRATHDQAVEAFKTAKEPIVVQVL 98
>d1ujda_ b.36.1.1 (A:) Hypothetical protein KIAA0559 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 117
Score = 29.9 bits (67), Expect = 0.15
Identities = 9/62 (14%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Query: 272 VTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLSHDQMVDLLKTS-SLVTVTVIPALSDG 327
+ ++ G A Q G L +G ++ + +++ +++++ ++ + V L+
Sbjct: 53 IAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEVQSIISQQSGEAEICVRLDLNMS 112
Query: 328 TP 329
P
Sbjct: 113 GP 114
>d1v6ba_ b.36.1.1 (A:) Harmonin {Mouse (Mus musculus) [TaxId:
10090]}
Length = 118
Score = 29.6 bits (66), Expect = 0.18
Identities = 13/83 (15%), Positives = 29/83 (34%), Gaps = 15/83 (18%)
Query: 253 TLKRNGLGQLGFHVQPDG-------LVTEVEHMGLAYQEG-LKQGCRL--ICKVAVSTLS 302
L+ G L ++ +V+ V G A + G + +G + I V+ +
Sbjct: 21 LLRIKKEGSLDLALEGGVDSPVGKVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYT 80
Query: 303 HDQMVDLLKTS-----SLVTVTV 320
+ L+ + + + V
Sbjct: 81 LAEAEAALQKAWNQGGDWIDLVV 103
>d1t2ma1 b.36.1.1 (A:2-93) Afadin {Human (Homo sapiens) [TaxId:
9606]}
Length = 92
Score = 29.1 bits (65), Expect = 0.21
Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 15/83 (18%)
Query: 251 ELTLKRNGLGQLGFHVQPDG---------LVTEVEHMGLAYQEG-LKQGCRL--ICKVAV 298
+TLK+ +G + V V G A +G L G +L + ++
Sbjct: 7 TVTLKKQN--GMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSL 64
Query: 299 STLSHDQMVDLLK-TSSLVTVTV 320
LS ++ +L+ TSS+VT+ V
Sbjct: 65 VGLSQERAAELMTRTSSVVTLEV 87
>d2bt6a1 d.15.4.1 (A:5-108) Adrenodoxin {Cow (Bos taurus) [TaxId:
9913]}
Length = 104
Score = 27.3 bits (60), Expect = 1.1
Identities = 23/100 (23%), Positives = 40/100 (40%), Gaps = 7/100 (7%)
Query: 212 HHQGEVTRIHMREGGGGDRDELMEVVVRLRAATPGSPAQELTLKRNGLGQLGFHVQPDGL 271
+ GE + G D L++VVV+ G A E TL + + + L
Sbjct: 9 NRDGETLTTKGKIG-----DSLLDVVVQNNLDIDGFGACEGTLACSTCHLIFEQHIFEKL 63
Query: 272 --VTEVEHMGLAYQEGLKQGCRLICKVAVSTLSHDQMVDL 309
+T+ E+ L GL RL C++ ++ + V +
Sbjct: 64 EAITDEENDMLDLAYGLTDRSRLGCQICLTKAMDNMTVRV 103
>d1fi4a1 d.14.1.5 (A:3-190) Mevalonate 5-diphosphate decarboxylase
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 188
Score = 27.3 bits (60), Expect = 2.3
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 84 LNQTYERSFSPPRSSNSSGYGTGSSSRSFMG 114
+ + Y+ S S + G+GS+ RS G
Sbjct: 130 IAKLYQLPQSTSEISRIARKGSGSACRSLFG 160
>d1ny8a_ d.52.6.1 (A:) Hypothetical protein YrbA {Escherichia coli
[TaxId: 562]}
Length = 97
Score = 26.3 bits (58), Expect = 2.3
Identities = 6/18 (33%), Positives = 11/18 (61%)
Query: 1 MDPDEIEKVLFENIPLEH 18
M+ +EI+ VL + L+
Sbjct: 6 MENNEIQSVLMNALSLQE 23
>d1qexa_ b.32.1.1 (A:) gp9 {Bacteriophage T4 [TaxId: 10665]}
Length = 288
Score = 26.8 bits (59), Expect = 4.5
Identities = 8/34 (23%), Positives = 12/34 (35%)
Query: 175 STDSVVLVEEQSRDLVFVAPAKSVLGWATSTNSL 208
S + VV L ++ S W S S+
Sbjct: 134 SGNLVVTSPYSKVTLRCISSDNSTSVWNYSIESM 167
>d1fona_ b.47.1.2 (A:) Procarboxypeptidase A-S6 subunit III (zymogen
E) {Cow (Bos taurus) [TaxId: 9913]}
Length = 232
Score = 25.5 bits (54), Expect = 8.5
Identities = 10/28 (35%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Query: 155 WQVSLEDSKTGSLMH-CVLAISTDSVVL 181
WQVSL+ K G+ H C ++ V+
Sbjct: 4 WQVSLQYEKDGAFHHTCGGSLIAPDWVV 31
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.316 0.131 0.382
Gapped
Lambda K H
0.267 0.0625 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,217,312
Number of extensions: 53142
Number of successful extensions: 189
Number of sequences better than 10.0: 1
Number of HSP's gapped: 183
Number of HSP's successfully gapped: 66
Length of query: 342
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 256
Effective length of database: 1,226,816
Effective search space: 314064896
Effective search space used: 314064896
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 53 (24.4 bits)