BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy70
(88 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A8XA40|CALX_CAEBR Calnexin OS=Caenorhabditis briggsae GN=cnx-1 PE=3 SV=3
Length = 623
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 45/59 (76%), Gaps = 1/59 (1%)
Query: 30 FVIQYEVMFQDKHDCGGAYLKLLTEGPALQDLTAFNDKTPYTIMFGPDKCGTDDKVCTV 88
F+ QY+V F++ +CGG YLKLL+EG A +DL +F DKTPYTIMFGPDKCG +V +
Sbjct: 137 FIAQYDVKFEEGQECGGGYLKLLSEG-AEKDLASFQDKTPYTIMFGPDKCGASGQVHLI 194
>sp|P27824|CALX_HUMAN Calnexin OS=Homo sapiens GN=CANX PE=1 SV=2
Length = 592
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Query: 16 SVRAGTCYFHVKVPFVIQYEVMFQDKHDCGGAYLKLLTEGPALQDLTAFNDKTPYTIMFG 75
S + + P ++QYEV FQ+ +CGGAY+KLL++ P L +L F+DKTPYTIMFG
Sbjct: 132 SAKLNKPFLFDTKPLIVQYEVNFQNGIECGGAYVKLLSKTPEL-NLDQFHDKTPYTIMFG 190
Query: 76 PDKCGTDDKV 85
PDKCG D K+
Sbjct: 191 PDKCGEDYKL 200
>sp|Q5R440|CALX_PONAB Calnexin OS=Pongo abelii GN=CANX PE=2 SV=2
Length = 592
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Query: 16 SVRAGTCYFHVKVPFVIQYEVMFQDKHDCGGAYLKLLTEGPALQDLTAFNDKTPYTIMFG 75
S + + P ++QYEV FQ+ +CGGAY+KLL++ P L +L F+DKTPYTIMFG
Sbjct: 132 SAKLNKPFLFDTKPLIVQYEVNFQNGIECGGAYVKLLSKTPEL-NLDQFHDKTPYTIMFG 190
Query: 76 PDKCGTDDKV 85
PDKCG D K+
Sbjct: 191 PDKCGEDYKL 200
>sp|P24643|CALX_CANFA Calnexin OS=Canis familiaris GN=CANX PE=1 SV=3
Length = 593
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Query: 16 SVRAGTCYFHVKVPFVIQYEVMFQDKHDCGGAYLKLLTEGPALQDLTAFNDKTPYTIMFG 75
S + + P ++QYEV FQ+ +CGGAY+KLL++ P L +L F+DKTPYTIMFG
Sbjct: 133 SAKLNKPFLFDTKPLIVQYEVNFQNGIECGGAYVKLLSKTPEL-NLDQFHDKTPYTIMFG 191
Query: 76 PDKCGTDDKV 85
PDKCG D K+
Sbjct: 192 PDKCGEDYKL 201
>sp|P34652|CALX_CAEEL Calnexin OS=Caenorhabditis elegans GN=cnx-1 PE=1 SV=1
Length = 619
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Query: 30 FVIQYEVMFQDKHDCGGAYLKLLTEGPALQDLTAFNDKTPYTIMFGPDKCGTDDKV 85
FV+QY++ F++ +CGG YLKLL+EG A +DL F DKT YTIMFGPDKCG KV
Sbjct: 138 FVVQYDIKFEEGQECGGGYLKLLSEG-AEKDLANFQDKTAYTIMFGPDKCGATGKV 192
>sp|P35565|CALX_RAT Calnexin OS=Rattus norvegicus GN=Canx PE=1 SV=1
Length = 591
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 16 SVRAGTCYFHVKVPFVIQYEVMFQDKHDCGGAYLKLLTEGPALQDLTAFNDKTPYTIMFG 75
S + + P ++QYEV FQ+ +CGGAY+KLL++ L +L F+DKTPYTIMFG
Sbjct: 133 SAKLNKPFLFDTKPLIVQYEVNFQNGIECGGAYVKLLSKTSEL-NLDQFHDKTPYTIMFG 191
Query: 76 PDKCGTDDKV 85
PDKCG D K+
Sbjct: 192 PDKCGEDYKL 201
>sp|Q3SYT6|CLGN_BOVIN Calmegin OS=Bos taurus GN=CLGN PE=2 SV=1
Length = 606
Score = 75.1 bits (183), Expect = 1e-13, Method: Composition-based stats.
Identities = 37/57 (64%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 29 PFVIQYEVMFQDKHDCGGAYLKLLTEGPALQDLTAFNDKTPYTIMFGPDKCGTDDKV 85
P V+QYEV FQD DCGGAY+KLL + L +L F DKT YTIMFGPDKCG D K+
Sbjct: 132 PLVVQYEVNFQDGIDCGGAYIKLLADTDGL-NLENFYDKTSYTIMFGPDKCGEDYKL 187
>sp|P35564|CALX_MOUSE Calnexin OS=Mus musculus GN=Canx PE=1 SV=1
Length = 591
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 16 SVRAGTCYFHVKVPFVIQYEVMFQDKHDCGGAYLKLLTEGPALQDLTAFNDKTPYTIMFG 75
S + + P ++QYEV FQ+ +CGGAY+KLL++ L L F+DKTPYTIMFG
Sbjct: 133 SAKLNKPFLFDTKPLIVQYEVNFQNGIECGGAYVKLLSKTAELS-LDQFHDKTPYTIMFG 191
Query: 76 PDKCGTDDKV 85
PDKCG D K+
Sbjct: 192 PDKCGEDYKL 201
>sp|P52194|CLGN_MOUSE Calmegin OS=Mus musculus GN=Clgn PE=2 SV=2
Length = 611
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 29 PFVIQYEVMFQDKHDCGGAYLKLLTEGPALQDLTAFNDKTPYTIMFGPDKCGTDDKVCTV 88
P ++QYEV FQD DCGGAY+KLL + L L F DKT YTIMFGPDKCG D K+ +
Sbjct: 136 PLIVQYEVNFQDGIDCGGAYIKLLADTGDLI-LENFYDKTSYTIMFGPDKCGEDYKLHLI 194
>sp|O14967|CLGN_HUMAN Calmegin OS=Homo sapiens GN=CLGN PE=1 SV=1
Length = 610
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 29 PFVIQYEVMFQDKHDCGGAYLKLLTEGPALQDLTAFNDKTPYTIMFGPDKCGTDDKV 85
P ++QYEV FQD DCGGAY+KLL + L L F DKT Y IMFGPDKCG D K+
Sbjct: 136 PLIVQYEVNFQDGIDCGGAYIKLLADTDDLI-LENFYDKTSYIIMFGPDKCGEDYKL 191
>sp|Q6Q487|CALX_ASPFU Calnexin homolog OS=Neosartorya fumigata (strain ATCC MYA-4609 /
Af293 / CBS 101355 / FGSC A1100) GN=AFUA_4G12850 PE=2
SV=2
Length = 563
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 30 FVIQYEVMFQDKHDCGGAYLKLLTEGPALQDLTAFNDKTPYTIMFGPDKCGTDDKV 85
V+QYEV Q+ CGGAY+KLL E L F++ TPY IMFGPDKCG +KV
Sbjct: 127 LVVQYEVKPQNSLVCGGAYMKLLQENKKLH-AEEFSNATPYVIMFGPDKCGATNKV 181
>sp|P29402|CALX1_ARATH Calnexin homolog 1 OS=Arabidopsis thaliana GN=CNX1 PE=1 SV=1
Length = 530
Score = 63.5 bits (153), Expect = 4e-10, Method: Composition-based stats.
Identities = 30/55 (54%), Positives = 38/55 (69%)
Query: 31 VIQYEVMFQDKHDCGGAYLKLLTEGPALQDLTAFNDKTPYTIMFGPDKCGTDDKV 85
V+QYEV FQ+ +CGGAYLK L A F+ ++PY+IMFGPDKCG +KV
Sbjct: 95 VLQYEVRFQEGLECGGAYLKYLRPQEAGWTPQGFDSESPYSIMFGPDKCGGTNKV 149
>sp|Q39994|CALX_HELTU Calnexin homolog OS=Helianthus tuberosus PE=2 SV=1
Length = 540
Score = 62.8 bits (151), Expect = 6e-10, Method: Composition-based stats.
Identities = 29/55 (52%), Positives = 38/55 (69%)
Query: 31 VIQYEVMFQDKHDCGGAYLKLLTEGPALQDLTAFNDKTPYTIMFGPDKCGTDDKV 85
V+QYEV Q+ +CGGAYLK L A F++++PY+IMFGPDKCG +KV
Sbjct: 99 VLQYEVRLQNGLECGGAYLKYLRPQDAGWTAKGFDNESPYSIMFGPDKCGATNKV 153
>sp|Q38798|CALX2_ARATH Calnexin homolog 2 OS=Arabidopsis thaliana GN=At5g07340 PE=2 SV=2
Length = 532
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/55 (52%), Positives = 37/55 (67%)
Query: 31 VIQYEVMFQDKHDCGGAYLKLLTEGPALQDLTAFNDKTPYTIMFGPDKCGTDDKV 85
V+QYE FQ+ +CGGAYLK L A F++ +PY+IMFGPDKCG +KV
Sbjct: 97 VLQYEARFQEGLECGGAYLKYLRPQEAGWVPQGFDNDSPYSIMFGPDKCGATNKV 151
>sp|Q23858|CALR_DICDI Calreticulin OS=Dictyostelium discoideum GN=crtA PE=1 SV=3
Length = 424
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 3/59 (5%)
Query: 30 FVIQYEVMFQDKHDCGGAYLKLLTEGPALQDLTAFNDKTPYTIMFGPDKCGTDDKVCTV 88
V+QY V + K DCGG+Y+KLL P+ D +AF+ ++ Y+IMFGPD CG +V +
Sbjct: 91 LVLQYTVKNEQKVDCGGSYIKLL---PSKLDQSAFDGESEYSIMFGPDVCGASKRVHVI 146
>sp|Q39817|CALX_SOYBN Calnexin homolog OS=Glycine max PE=2 SV=1
Length = 546
Score = 57.4 bits (137), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 37/55 (67%)
Query: 31 VIQYEVMFQDKHDCGGAYLKLLTEGPALQDLTAFNDKTPYTIMFGPDKCGTDDKV 85
V+Q+E Q+ +CGGAY+K L + F++++PY+IMFGPDKCG +KV
Sbjct: 104 VLQFETRLQNGLECGGAYIKYLRPQESGWKPKEFDNESPYSIMFGPDKCGATNKV 158
>sp|Q2TBR8|CALR3_BOVIN Calreticulin-3 OS=Bos taurus GN=CALR3 PE=2 SV=1
Length = 384
Score = 56.2 bits (134), Expect = 6e-08, Method: Composition-based stats.
Identities = 29/59 (49%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 30 FVIQYEVMFQDKHDCGGAYLKLLTEGPALQDLTAFNDKTPYTIMFGPDKCGTDDKVCTV 88
+IQY V + K DCGG Y+KL PA D N K+ Y IMFGPD CG D K V
Sbjct: 91 LIIQYTVKHEQKMDCGGGYIKLF---PADVDQKNLNGKSQYYIMFGPDICGFDIKTVHV 146
>sp|Q96L12|CALR3_HUMAN Calreticulin-3 OS=Homo sapiens GN=CALR3 PE=1 SV=2
Length = 384
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 30 FVIQYEVMFQDKHDCGGAYLKLLTEGPALQDLTAFNDKTPYTIMFGPDKCGTDDK 84
VIQY V + K DCGG Y+K+ PA D N K+ Y IMFGPD CG D K
Sbjct: 91 LVIQYTVKHEQKMDCGGGYIKVF---PADIDQKNLNGKSQYYIMFGPDICGFDIK 142
>sp|P36581|CALX_SCHPO Calnexin homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=cal1 PE=1 SV=1
Length = 560
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 4/56 (7%)
Query: 30 FVIQYEVMFQDKHDCGGAYLKLLTEGPALQDLTAFNDKTPYTIMFGPDKCGTDDKV 85
V+QYEV ++ +CGGAYLKLL E P +++ + Y IMFGPDKCG +D+V
Sbjct: 118 LVVQYEVNPEEGLNCGGAYLKLLAE-PTHGEMS---NSIDYRIMFGPDKCGVNDRV 169
>sp|O04151|CALR1_ARATH Calreticulin-1 OS=Arabidopsis thaliana GN=CRT1 PE=1 SV=1
Length = 425
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 30 FVIQYEVMFQDKHDCGGAYLKLLTEGPALQDLTAFNDKTPYTIMFGPDKCG 80
V Q+ V + K DCGG Y+KLL++ D T F TPY+IMFGPD CG
Sbjct: 94 LVFQFSVKHEQKLDCGGGYMKLLSDD---VDQTKFGGDTPYSIMFGPDICG 141
>sp|Q9D9Q6|CALR3_MOUSE Calreticulin-3 OS=Mus musculus GN=Calr3 PE=1 SV=2
Length = 380
Score = 53.9 bits (128), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 30 FVIQYEVMFQDKHDCGGAYLKLLTEGPALQDLTAFNDKTPYTIMFGPDKCGTDDK 84
VIQY V + K DCGG Y+K+ P+ D N K+ Y IMFGPD CG D K
Sbjct: 91 LVIQYTVKHEQKMDCGGGYIKVF---PSDLDQKKMNGKSQYYIMFGPDICGFDIK 142
>sp|O82709|CALX_PEA Calnexin homolog OS=Pisum sativum PE=2 SV=1
Length = 551
Score = 53.1 bits (126), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 36/55 (65%)
Query: 31 VIQYEVMFQDKHDCGGAYLKLLTEGPALQDLTAFNDKTPYTIMFGPDKCGTDDKV 85
V+Q+E Q+ +CGGAY+K L + F++++ Y+IMFGPD+CG +KV
Sbjct: 105 VLQFETRLQNGLECGGAYIKYLQTQESGWKPKGFDNESGYSIMFGPDRCGATNKV 159
>sp|O04153|CALR3_ARATH Calreticulin-3 OS=Arabidopsis thaliana GN=CRT3 PE=2 SV=2
Length = 424
Score = 52.8 bits (125), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 30 FVIQYEVMFQDKHDCGGAYLKLLTEGPALQDLTAFNDKTPYTIMFGPDKCGTDDK 84
V+QY V + +CGGAY+KLL+ + F TPY++MFGPD CGT K
Sbjct: 100 LVVQYSVKIEQDIECGGAYIKLLS---GYVNQKQFGGDTPYSLMFGPDICGTQTK 151
>sp|P93508|CALR_RICCO Calreticulin OS=Ricinus communis PE=2 SV=1
Length = 415
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 30 FVIQYEVMFQDKHDCGGAYLKLLTEGPALQDLTAFNDKTPYTIMFGPDKCG 80
V Q+ V + K DCGG Y+KLL+ + D F TPY+IMFGPD CG
Sbjct: 92 LVFQFSVKHEQKLDCGGGYMKLLS---SSTDQKKFGGDTPYSIMFGPDICG 139
>sp|P27798|CALR_CAEEL Calreticulin OS=Caenorhabditis elegans GN=crt-1 PE=1 SV=1
Length = 395
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 30 FVIQYEVMFQDKHDCGGAYLKLLTEGPALQDLTAFNDKTPYTIMFGPDKCGTDDKVCTV 88
VIQY V + DCGG Y+K++ A DL F+ +TPY +MFGPD CG +V +
Sbjct: 87 LVIQYTVKHEQGIDCGGGYVKVMR---ADADLGDFHGETPYNVMFGPDICGPTRRVHVI 142
>sp|Q61KR9|CALR_CAEBR Calreticulin OS=Caenorhabditis briggsae GN=crt-1 PE=3 SV=1
Length = 396
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 30 FVIQYEVMFQDKHDCGGAYLKLLTEGPALQDLTAFNDKTPYTIMFGPDKCGTDDKVCTV 88
VIQY V + DCGG Y+K++ G A DL F+ +TPY +MFGPD CG +V +
Sbjct: 87 LVIQYTVKHEQGIDCGGGYVKVMR-GDA--DLADFHGETPYNVMFGPDICGPTRRVHVI 142
>sp|Q9ZNY3|CALR_EUGGR Calreticulin OS=Euglena gracilis PE=2 SV=1
Length = 401
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 30 FVIQYEVMFQDKHDCGGAYLKLLTEGPALQDLTAFNDKTPYTIMFGPDKCGTDDKV 85
V+Q+ V + DCGG YLKLL P++ D F TPY IMFGPD CG K+
Sbjct: 89 LVLQFSVKHEQDIDCGGGYLKLL---PSV-DAAKFTGDTPYHIMFGPDICGATKKI 140
>sp|Q9ZPP1|CALR_BERST Calreticulin OS=Berberis stolonifera PE=2 SV=1
Length = 416
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 30 FVIQYEVMFQDKHDCGGAYLKLLTEGPALQDLTAFNDKTPYTIMFGPDKCG 80
V Q+ V + K DCGG Y+KLL+ D F TPY+IMFGPD CG
Sbjct: 94 LVFQFSVKHEQKLDCGGGYMKLLS---GDVDQKKFGGDTPYSIMFGPDICG 141
>sp|O81919|CALR_BETVU Calreticulin OS=Beta vulgaris PE=2 SV=1
Length = 416
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 30 FVIQYEVMFQDKHDCGGAYLKLLTEGPALQDLTAFNDKTPYTIMFGPDKCG 80
V Q+ V + K DCGG Y+KLL+ D F TPY+IMFGPD CG
Sbjct: 97 LVFQFSVKHEQKLDCGGGYMKLLS---GEVDQKKFGGDTPYSIMFGPDICG 144
>sp|Q38858|CALR2_ARATH Calreticulin-2 OS=Arabidopsis thaliana GN=CRT2 PE=1 SV=3
Length = 424
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 30 FVIQYEVMFQDKHDCGGAYLKLLTEGPALQDLTAFNDKTPYTIMFGPDKCG 80
V Q+ V + K DCGG Y+KLL+ D F TPY+IMFGPD CG
Sbjct: 94 LVFQFSVKHEQKLDCGGGYMKLLS---GDVDQKKFGGDTPYSIMFGPDICG 141
>sp|Q40401|CALR_NICPL Calreticulin OS=Nicotiana plumbaginifolia GN=CAL1 PE=2 SV=1
Length = 416
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 30 FVIQYEVMFQDKHDCGGAYLKLLTEGPALQDLTAFNDKTPYTIMFGPDKCG 80
V Q+ V + K DCGG Y+KLL+ D F TPY+IMFGPD CG
Sbjct: 99 LVFQFSVKHEQKLDCGGGYMKLLS---GDVDQKKFGGDTPYSIMFGPDICG 146
>sp|Q9XF98|CALR_PRUAR Calreticulin OS=Prunus armeniaca PE=2 SV=1
Length = 421
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 30 FVIQYEVMFQDKHDCGGAYLKLLTEGPALQDLTAFNDKTPYTIMFGPDKCG 80
V Q+ V + K DCGG Y+KLL+ D F TPY+IMFGPD CG
Sbjct: 96 LVFQFSVKHEQKLDCGGGYIKLLS---GDVDQKKFGGDTPYSIMFGPDICG 143
>sp|Q9SLY8|CALR_ORYSJ Calreticulin OS=Oryza sativa subsp. japonica GN=Os07g0246200 PE=1
SV=2
Length = 424
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 30 FVIQYEVMFQDKHDCGGAYLKLLTEGPALQDLTAFNDKTPYTIMFGPDKCG-TDDKVCTV 88
V+Q+ V + K DCGG Y+KLL D F TPY+IMFGPD CG + KV T+
Sbjct: 101 LVLQFSVKHEQKLDCGGGYVKLLG---GDVDQKKFGGDTPYSIMFGPDICGYSTKKVHTI 157
>sp|P29413|CALR_DROME Calreticulin OS=Drosophila melanogaster GN=Crc PE=1 SV=2
Length = 406
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 15 ASVRAGTCYFHVKVPFVIQYEVMFQDKHDCGGAYLKLLTEGPALQDLTAFNDKTPYTIMF 74
A+ R + + P V+Q+ V + DCGG Y+KL D T + ++PY IMF
Sbjct: 76 AASRKFDGFSNEDKPLVVQFSVKHEQNIDCGGGYVKLFD---CSLDQTDMHGESPYEIMF 132
Query: 75 GPDKCG 80
GPD CG
Sbjct: 133 GPDICG 138
>sp|P11012|CALR_ONCVO Calreticulin OS=Onchocerca volvulus GN=crt-1 PE=2 SV=2
Length = 388
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 30 FVIQYEVMFQDKHDCGGAYLKLLTEGPALQDLTAFNDKTPYTIMFGPDKCG 80
VIQ+ V + DCGG Y+KL+ L+D +TPY IMFGPD CG
Sbjct: 89 LVIQFSVKHEQDIDCGGGYVKLMASDVNLEDSHG---ETPYHIMFGPDICG 136
>sp|P16554|NUMB_DROME Protein numb OS=Drosophila melanogaster GN=numb PE=1 SV=2
Length = 556
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/27 (70%), Positives = 23/27 (85%)
Query: 1 MPESSKPHQWQSDEASVRAGTCYFHVK 27
+PESSKPHQWQ+DE +VR+ TC F VK
Sbjct: 60 VPESSKPHQWQADEEAVRSATCSFSVK 86
>sp|Q06814|CALR_SCHMA Calreticulin OS=Schistosoma mansoni PE=2 SV=2
Length = 393
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 30 FVIQYEVMFQDKHDCGGAYLKLLTEGPALQDLTAFNDKTPYTIMFGPDKCG 80
V+Q+ V F CGGAY+KLL G + D F+ ++PY IMFGPD CG
Sbjct: 89 MVLQFTVKFDKTVSCGGAYIKLL--GSDI-DPKKFHGESPYKIMFGPDICG 136
>sp|Q9STD3|CALR_CHLRE Calreticulin OS=Chlamydomonas reinhardtii PE=2 SV=1
Length = 420
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 31 VIQYEVMFQDKHDCGGAYLKLLTEGPALQDLTAFNDKTPYTIMFGPDKCG 80
V+Q+ V + DCGG Y+K++ Q + F TPY+IMFGPD CG
Sbjct: 93 VVQFSVKHEQDLDCGGGYIKVVPATSEKQ-MGEFGGDTPYSIMFGPDICG 141
>sp|P15253|CALR_RABIT Calreticulin OS=Oryctolagus cuniculus GN=CALR PE=1 SV=1
Length = 418
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 29 PFVIQYEVMFQDKHDCGGAYLKLLTEGPALQDLTAFNDKTPYTIMFGPDKCG 80
P V+Q+ V + DCGG Y+KL PA D + + Y IMFGPD CG
Sbjct: 90 PLVVQFTVKHEQNIDCGGGYVKLF---PAGLDQKDMHGDSEYNIMFGPDICG 138
>sp|Q7Z1E6|CALR_BOMMO Calreticulin OS=Bombyx mori GN=crt PE=1 SV=1
Length = 398
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 29 PFVIQYEVMFQDKHDCGGAYLKLLTEGPALQDLTAFNDKTPYTIMFGPDKCG 80
P V+Q+ V + DCGG YLK+ +D+ +TPY IMFGPD CG
Sbjct: 90 PLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHG---ETPYEIMFGPDICG 138
>sp|A1L1I3|NUMBL_RAT Numb-like protein OS=Rattus norvegicus GN=Numbl PE=1 SV=1
Length = 614
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 1 MPESSKPHQWQSDEASVRAGTCYFHVKVPFVIQYEV-MFQDKHDCGGAYLKLLTEG 55
+PE+S+PHQWQ+DE +VR GTC F V+ ++ EV + H C A KL G
Sbjct: 57 VPEASRPHQWQADEDAVRKGTCSFPVR--YLGHVEVEESRGMHVCEDAVKKLKAMG 110
>sp|P52193|CALR_BOVIN Calreticulin OS=Bos taurus GN=CALR PE=1 SV=2
Length = 417
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 30 FVIQYEVMFQDKHDCGGAYLKLLTEGPALQDLTAFNDKTPYTIMFGPDKCG 80
V+Q+ V + DCGG Y+KL PA D T + + Y IMFGPD CG
Sbjct: 91 LVVQFTVKHEQNIDCGGGYVKLF---PAGLDQTDMHGDSEYNIMFGPDICG 138
>sp|Q9Y6R0|NUMBL_HUMAN Numb-like protein OS=Homo sapiens GN=NUMBL PE=1 SV=1
Length = 609
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/27 (62%), Positives = 23/27 (85%)
Query: 1 MPESSKPHQWQSDEASVRAGTCYFHVK 27
+PE+S+PHQWQ+DE +VR GTC F V+
Sbjct: 57 VPEASRPHQWQADEDAVRKGTCSFPVR 83
>sp|P28491|CALR_PIG Calreticulin OS=Sus scrofa GN=CALR PE=1 SV=3
Length = 417
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 30 FVIQYEVMFQDKHDCGGAYLKLLTEGPALQDLTAFNDKTPYTIMFGPDKCG 80
V+Q+ V + DCGG Y+KL +G D T + + Y IMFGPD CG
Sbjct: 91 LVVQFTVKHEQNIDCGGGYVKLFPDG---LDQTDMHGDSEYNIMFGPDICG 138
>sp|O08919|NUMBL_MOUSE Numb-like protein OS=Mus musculus GN=Numbl PE=1 SV=3
Length = 604
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/27 (62%), Positives = 23/27 (85%)
Query: 1 MPESSKPHQWQSDEASVRAGTCYFHVK 27
+PE+S+PHQWQ+DE +VR GTC F V+
Sbjct: 57 VPEASRPHQWQADEDAVRKGTCSFPVR 83
>sp|P27797|CALR_HUMAN Calreticulin OS=Homo sapiens GN=CALR PE=1 SV=1
Length = 417
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 30 FVIQYEVMFQDKHDCGGAYLKLLTEGPALQDLTAFNDKTPYTIMFGPDKCG 80
V+Q+ V + DCGG Y+KL P D T + + Y IMFGPD CG
Sbjct: 91 LVVQFTVKHEQNIDCGGGYVKLF---PNSLDQTDMHGDSEYNIMFGPDICG 138
>sp|P49757|NUMB_HUMAN Protein numb homolog OS=Homo sapiens GN=NUMB PE=1 SV=2
Length = 651
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 1 MPESSKPHQWQSDEASVRAGTCYFHVKVPFVIQYEV-MFQDKHDCGGAYLKLLTE 54
+PE+S+PHQWQ+DE VR G C F VK ++ EV + H C A +L E
Sbjct: 16 VPEASRPHQWQTDEEGVRTGKCSFPVK--YLGHVEVDESRGMHICEDAVKRLKAE 68
>sp|Q2HWU3|CALR_MACFU Calreticulin OS=Macaca fuscata fuscata GN=CALR PE=2 SV=1
Length = 417
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 30 FVIQYEVMFQDKHDCGGAYLKLLTEGPALQDLTAFNDKTPYTIMFGPDKCG 80
V+Q+ V + DCGG Y+KL P D T + + Y IMFGPD CG
Sbjct: 91 LVVQFTVKHEQNIDCGGGYVKLF---PNSLDQTDMHGDSEYNIMFGPDICG 138
>sp|Q4R6K8|CALR_MACFA Calreticulin OS=Macaca fascicularis GN=CALR PE=2 SV=1
Length = 417
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 30 FVIQYEVMFQDKHDCGGAYLKLLTEGPALQDLTAFNDKTPYTIMFGPDKCG 80
V+Q+ V + DCGG Y+KL P D T + + Y IMFGPD CG
Sbjct: 91 LVVQFTVKHEQNIDCGGGYVKLF---PNSLDQTDMHGDSEYNIMFGPDICG 138
>sp|Q4VIT5|CALR_CHLAE Calreticulin OS=Chlorocebus aethiops GN=CALR PE=2 SV=1
Length = 417
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 30 FVIQYEVMFQDKHDCGGAYLKLLTEGPALQDLTAFNDKTPYTIMFGPDKCG 80
V+Q+ V + DCGG Y+KL P D T + + Y IMFGPD CG
Sbjct: 91 LVVQFTVKHEQNIDCGGGYVKLF---PNSLDQTDMHGDSEYNIMFGPDICG 138
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.441
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,926,159
Number of Sequences: 539616
Number of extensions: 1268984
Number of successful extensions: 1678
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1566
Number of HSP's gapped (non-prelim): 76
length of query: 88
length of database: 191,569,459
effective HSP length: 58
effective length of query: 30
effective length of database: 160,271,731
effective search space: 4808151930
effective search space used: 4808151930
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)