Query psy70
Match_columns 88
No_of_seqs 104 out of 351
Neff 4.4
Searched_HMMs 29240
Date Sat Aug 17 00:13:12 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy70.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/70hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pow_A Calreticulin; legume le 100.0 4.1E-39 1.4E-43 246.6 5.3 72 13-88 66-138 (265)
2 3rg0_A Calreticulin; beta-sand 100.0 3.9E-38 1.3E-42 247.2 5.0 72 13-88 61-133 (332)
3 1jhn_A Calnexin; jelly-roll, b 100.0 5.5E-38 1.9E-42 252.4 5.6 75 13-88 86-160 (424)
4 3p91_A Proliferating cell nucl 60.5 7 0.00024 28.1 3.2 21 27-55 235-255 (265)
5 2quo_A Heat-labIle enterotoxin 50.8 16 0.00054 24.5 3.4 24 46-75 101-124 (126)
6 1dj7_B Ferredoxin thioredoxin 46.9 4.1 0.00014 25.8 0.0 22 8-38 40-61 (75)
7 3ifv_A PCNA; processivity fact 39.5 19 0.00066 25.3 2.6 24 26-55 219-242 (247)
8 3fds_C DNA polymerase sliding 35.8 27 0.00092 25.0 2.9 22 26-54 225-246 (249)
9 3f0w_A NUMB-R, NUMB-like prote 35.7 5.8 0.0002 27.0 -0.6 17 3-19 23-39 (168)
10 3k4x_A PCNA, proliferating cel 35.2 27 0.00092 29.3 3.2 22 26-55 237-258 (798)
11 3gne_A Val-1; alginate lyase, 30.4 27 0.00092 26.2 2.2 25 22-46 65-91 (252)
12 3k4x_A PCNA, proliferating cel 28.9 40 0.0014 28.3 3.2 21 27-55 772-792 (798)
13 3lx2_A DNA polymerase sliding 27.0 44 0.0015 23.6 2.8 23 26-55 224-246 (259)
14 3am2_A Heat-labIle enterotoxin 25.2 64 0.0022 24.4 3.5 24 46-75 294-317 (328)
15 3h0d_A CTSR; protein DNA compl 23.9 27 0.00092 24.5 1.1 17 34-53 55-71 (155)
16 1wfn_A Sidekick 2; FN3, cell a 23.6 80 0.0027 18.4 3.1 57 14-72 33-89 (119)
17 3l0w_B Monoubiquitinated proli 22.0 62 0.0021 21.8 2.7 21 27-55 146-166 (169)
18 2cxk_A Camta1, calmodulin bind 21.2 1.1E+02 0.0039 19.0 3.6 37 34-78 10-46 (95)
19 3pge_A SUMO-modified prolifera 20.2 69 0.0023 22.9 2.7 21 27-55 174-194 (200)
No 1
>3pow_A Calreticulin; legume lectin fold, CNX/CRT family, multi-functional, carboh binding, peptide binding, multi-compartmental, chaperone; 1.55A {Homo sapiens} PDB: 3pos_A 3o0w_A* 3o0v_A* 3o0x_A*
Probab=100.00 E-value=4.1e-39 Score=246.63 Aligned_cols=72 Identities=33% Similarity=0.623 Sum_probs=68.5
Q ss_pred cccceecCceeeecCCceEEEEEEEeecccccCcceEEeecCCCcccccccCCCCCCceEEeecCCcCC-CCeEEEC
Q psy70 13 DEASVRAGTCYFHVKVPFVIQYEVMFQDKHDCGGAYLKLLTEGPALQDLTAFNDKTPYTIMFGPDKCGT-DDKVCTV 88 (88)
Q Consensus 13 ~~~s~~l~kpf~~~~k~LVvQYEVk~q~~idCGGaYIKLl~~~~~~~~~~~f~~~tpY~IMFGPD~Cg~-~~kvHfI 88 (88)
+-||++| +||+|++|+||||||||+|++|+|||||||||++ ++|+++|+++|||+||||||+||+ ++|||||
T Consensus 66 yaISakl-~pf~~~~k~LVvQYeVk~q~~idCGGaYiKLl~~---~~~~~~f~~~tpY~IMFGPD~CG~~~~kvHfI 138 (265)
T 3pow_A 66 YALSASF-EPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPN---SLDQTDMHGDSEYNIMFGPDICGPGTKKVHVI 138 (265)
T ss_dssp EEEEEEE-EEECCTTSCEEEEEEEECTTCCSEEECCEEEECT---TCCGGGCCTTSCCSEEEEEEEESTTCEEEEEE
T ss_pred hhhhccc-CCccCCCCCEEEEEEEEeccccccCceEEEeecC---CCCHhhcCCCCCceEEecCcccCCCCCEEEEE
Confidence 5689999 9999999999999999999999999999999996 479999999999999999999998 7899998
No 2
>3rg0_A Calreticulin; beta-sandwich, chaperone, monoglucosylated proteins binding, carbohydrate binding, calcium binding, endoplasmic reticulu; 2.57A {Mus musculus}
Probab=100.00 E-value=3.9e-38 Score=247.23 Aligned_cols=72 Identities=32% Similarity=0.611 Sum_probs=68.3
Q ss_pred cccceecCceeeecCCceEEEEEEEeecccccCcceEEeecCCCcccccccCCCCCCceEEeecCCcCC-CCeEEEC
Q psy70 13 DEASVRAGTCYFHVKVPFVIQYEVMFQDKHDCGGAYLKLLTEGPALQDLTAFNDKTPYTIMFGPDKCGT-DDKVCTV 88 (88)
Q Consensus 13 ~~~s~~l~kpf~~~~k~LVvQYEVk~q~~idCGGaYIKLl~~~~~~~~~~~f~~~tpY~IMFGPD~Cg~-~~kvHfI 88 (88)
+-|||+| +||+|++|+||||||||+|++|+|||||||||++ ++|+++|+++|||+||||||+||+ ++|||||
T Consensus 61 yAISakf-~pf~n~~k~LVvQYeVK~e~~idCGGaYiKLl~~---~~d~~~f~~~TpY~IMFGPD~CG~~~~kvH~I 133 (332)
T 3rg0_A 61 YALSAKF-EPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPS---GLDQKDMHGDSEYNIMFGPDICGPGTKKVHVI 133 (332)
T ss_dssp EEEEEEE-EEECCTTSCEEEEEEEEETTCCSEEECCEEEECS---SCCGGGCCTTSCCSEEEEEEEETTTEEEEEEE
T ss_pred hhhhccc-CCccCCCCCEEEEEEEEcccccccCceEEEeecC---cCCHhhcCCCCcceEEecCcccCCCCCEEEEE
Confidence 4689999 9999999999999999999999999999999996 479999999999999999999998 6799998
No 3
>1jhn_A Calnexin; jelly-roll, beta sandwich, chaperone; 2.90A {Canis lupus familiaris} SCOP: b.29.1.12 b.104.1.1
Probab=100.00 E-value=5.5e-38 Score=252.42 Aligned_cols=75 Identities=48% Similarity=0.901 Sum_probs=71.9
Q ss_pred cccceecCceeeecCCceEEEEEEEeecccccCcceEEeecCCCcccccccCCCCCCceEEeecCCcCCCCeEEEC
Q psy70 13 DEASVRAGTCYFHVKVPFVIQYEVMFQDKHDCGGAYLKLLTEGPALQDLTAFNDKTPYTIMFGPDKCGTDDKVCTV 88 (88)
Q Consensus 13 ~~~s~~l~kpf~~~~k~LVvQYEVk~q~~idCGGaYIKLl~~~~~~~~~~~f~~~tpY~IMFGPD~Cg~~~kvHfI 88 (88)
+-||++|++||+|++|+||||||||+|++|+|||||||||+... ++++++|+++|||+||||||+||.++|||||
T Consensus 86 yaISa~~~kpf~~~~k~LVvQYeVk~q~~idCGGaYiKLl~~~~-~~d~~~f~~~TpY~IMFGPD~CG~~~kvH~I 160 (424)
T 1jhn_A 86 HAISAKLNKPFLFDTKPLIVQYEVNFQNGIECGGAYVKLLSKTP-ELNLDQFHDKTPYTIMFGPDKCGEDYKLHFI 160 (424)
T ss_dssp CEEEEEEEEEECSSSSCEEEEEEECCTTCCSEEECCEEEEBCCS-SCCGGGCCSSCCEEEEEEEEEESSCCEEEEE
T ss_pred HHHHHhhcCccccCCCCEEEEEEEEecccccccceEEEeecCcc-cCCHhHcCCCCCceEeccCCccCCCCeEEEE
Confidence 56999999999999999999999999999999999999999865 6899999999999999999999999999998
No 4
>3p91_A Proliferating cell nuclear antigen; DNA binding protein, DNA replication, processivity, sliding; 2.40A {Entamoeba histolytica}
Probab=60.53 E-value=7 Score=28.10 Aligned_cols=21 Identities=14% Similarity=0.428 Sum_probs=17.8
Q ss_pred CCceEEEEEEEeecccccCcceEEeecCC
Q psy70 27 KVPFVIQYEVMFQDKHDCGGAYLKLLTEG 55 (88)
Q Consensus 27 ~k~LVvQYEVk~q~~idCGGaYIKLl~~~ 55 (88)
+.||+|||++ |||||+.+-+.
T Consensus 235 ~~Pl~l~~~i--------~~g~~~f~lAP 255 (265)
T 3p91_A 235 QAPLIMEFKG--------EACVLKFYLAP 255 (265)
T ss_dssp SSCEEEEEEE--------TTEEEEEEECC
T ss_pred CccEEEEEEE--------CCEEEEEEEcC
Confidence 6899999998 57899998664
No 5
>2quo_A Heat-labIle enterotoxin B chain; beta sandwich, claudin-4 binding domain, therapeutic agent; 1.75A {Clostridium perfringens}
Probab=50.85 E-value=16 Score=24.54 Aligned_cols=24 Identities=25% Similarity=0.782 Sum_probs=17.8
Q ss_pred cceEEeecCCCcccccccCCCCCCceEEee
Q psy70 46 GAYLKLLTEGPALQDLTAFNDKTPYTIMFG 75 (88)
Q Consensus 46 GaYIKLl~~~~~~~~~~~f~~~tpY~IMFG 75 (88)
|.|+-.+.+. ..+++.-||+|+|-
T Consensus 101 gqyvlvmkan------ssysgnypysilfq 124 (126)
T 2quo_A 101 GQYVLVMKAN------SSYSGNYPYSILFQ 124 (126)
T ss_dssp EEEEEEEEES------SCCSSCBCCEEEEE
T ss_pred CcEEEEEecc------CcccCCCCceEeee
Confidence 5677666553 36889999999994
No 6
>1dj7_B Ferredoxin thioredoxin reductase: variable chain; 4Fe-4S cluster binding fold with CXCX16CXCX8CXC binding MOTI electron transport; 1.60A {Synechocystis SP} SCOP: b.34.4.3 PDB: 2pu9_B 2pvo_B 2puo_B 2puk_B 2pvd_B 2pvg_B
Probab=46.88 E-value=4.1 Score=25.80 Aligned_cols=22 Identities=27% Similarity=0.684 Sum_probs=15.9
Q ss_pred ccccccccceecCceeeecCCceEEEEEEEe
Q psy70 8 HQWQSDEASVRAGTCYFHVKVPFVIQYEVMF 38 (88)
Q Consensus 8 ~~~~~~~~s~~l~kpf~~~~k~LVvQYEVk~ 38 (88)
..|+-..|||+| |+.|||.+||
T Consensus 40 ~~wkGr~ISanl---------P~~V~F~~kF 61 (75)
T 1dj7_B 40 TEWQGRPISANL---------PVLVKFEQRF 61 (75)
T ss_dssp SEETTEECCCSS---------CEEEEETTTE
T ss_pred eeccCcEecCCC---------CEEEEEehHh
Confidence 468888888876 5788886544
No 7
>3ifv_A PCNA; processivity factor, sliding clamp, halophilic, replication; 2.00A {Haloferax volcanii} PDB: 3hi8_A
Probab=39.48 E-value=19 Score=25.34 Aligned_cols=24 Identities=13% Similarity=0.306 Sum_probs=18.3
Q ss_pred cCCceEEEEEEEeecccccCcceEEeecCC
Q psy70 26 VKVPFVIQYEVMFQDKHDCGGAYLKLLTEG 55 (88)
Q Consensus 26 ~~k~LVvQYEVk~q~~idCGGaYIKLl~~~ 55 (88)
.+.||+|||++.- |+|||+.+-+.
T Consensus 219 ~~~Pl~l~~~i~~------~~g~~~~~lAP 242 (247)
T 3ifv_A 219 EEFPVKLHYQIAE------GMGTITYMLAP 242 (247)
T ss_dssp BSSCEEEEEEEGG------GTEEEEEEECC
T ss_pred CCccEEEEEEEcC------CcEEEEEEEee
Confidence 3589999999842 56899988664
No 8
>3fds_C DNA polymerase sliding clamp B; protein-protein complex, DNA damage, DNA repair, DNA replica DNA-binding, DNA-directed DNA polymerase; HET: DNA 1PE PGE; 2.05A {Sulfolobus solfataricus} PDB: 2io4_A* 2nti_D* 2hii_A 2hik_A 2ix2_A* 2izo_C*
Probab=35.82 E-value=27 Score=24.97 Aligned_cols=22 Identities=18% Similarity=0.365 Sum_probs=17.5
Q ss_pred cCCceEEEEEEEeecccccCcceEEeecC
Q psy70 26 VKVPFVIQYEVMFQDKHDCGGAYLKLLTE 54 (88)
Q Consensus 26 ~~k~LVvQYEVk~q~~idCGGaYIKLl~~ 54 (88)
.+.||.|||++. +||||+.+-+
T Consensus 225 ~~~Pl~l~y~i~-------~~G~l~f~lA 246 (249)
T 3fds_C 225 ENLPMKIDVEAV-------SGGHMIFWIA 246 (249)
T ss_dssp TTCCEEEEEECT-------TSCEEEEEEC
T ss_pred CCcCEEEEEEeC-------CCcEEEEEEe
Confidence 478999999983 3689998755
No 9
>3f0w_A NUMB-R, NUMB-like protein; PH domain-like, PID domain, phosphoprotein, signaling protei structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens} PDB: 1wj1_A 2nmb_A* 1ddm_A
Probab=35.71 E-value=5.8 Score=26.98 Aligned_cols=17 Identities=59% Similarity=1.079 Sum_probs=12.6
Q ss_pred CCCCCccccccccceec
Q psy70 3 ESSKPHQWQSDEASVRA 19 (88)
Q Consensus 3 ~~~~~~~~~~~~~s~~l 19 (88)
|+++|++|+.++.+.+-
T Consensus 23 ~~~~p~~w~~~~e~l~~ 39 (168)
T 3f0w_A 23 MASRPHQWQADEDAVRK 39 (168)
T ss_dssp HHCCCTTTHHHHHHHHT
T ss_pred cCCCCcCCcCCHHHHhC
Confidence 57899999976665543
No 10
>3k4x_A PCNA, proliferating cell nuclear antigen; DNA replication, DNA-binding; HET: DNA; 2.98A {Saccharomyces cerevisiae}
Probab=35.16 E-value=27 Score=29.32 Aligned_cols=22 Identities=14% Similarity=0.489 Sum_probs=18.5
Q ss_pred cCCceEEEEEEEeecccccCcceEEeecCC
Q psy70 26 VKVPFVIQYEVMFQDKHDCGGAYLKLLTEG 55 (88)
Q Consensus 26 ~~k~LVvQYEVk~q~~idCGGaYIKLl~~~ 55 (88)
.+.||.|||++ |||||+.+=+.
T Consensus 237 ~~~PL~l~y~i--------~~G~l~f~lAP 258 (798)
T 3k4x_A 237 SEAPALFQFDL--------KSGFLQFFLAP 258 (798)
T ss_dssp SSSCEEEEEEE--------TTEEEEEEECC
T ss_pred CCCcEEEEEEE--------CCeEEEEEEcc
Confidence 37899999999 57899999664
No 11
>3gne_A Val-1; alginate lyase, polysaccharide lyase family 14, chlorella VI lyase; HET: FLC; 1.20A {Chlorella virus} PDB: 3a0n_A* 3im0_A*
Probab=30.44 E-value=27 Score=26.24 Aligned_cols=25 Identities=20% Similarity=0.208 Sum_probs=19.8
Q ss_pred eeeecCCceEEEEEEEeecc--cccCc
Q psy70 22 CYFHVKVPFVIQYEVMFQDK--HDCGG 46 (88)
Q Consensus 22 pf~~~~k~LVvQYEVk~q~~--idCGG 46 (88)
|+....+.+.++|+|+|..+ +.+||
T Consensus 65 p~~~~~~e~~lsY~V~Fp~~Fdf~kGG 91 (252)
T 3gne_A 65 PDGLNKNAITFAWEVFYPKGFDFARGG 91 (252)
T ss_dssp CTTCCTTEEEEEEEEEBCTTCCCTTCE
T ss_pred CCCCCcceEEEEEEEECCCCCccccCC
Confidence 55555689999999999987 56766
No 12
>3k4x_A PCNA, proliferating cell nuclear antigen; DNA replication, DNA-binding; HET: DNA; 2.98A {Saccharomyces cerevisiae}
Probab=28.87 E-value=40 Score=28.31 Aligned_cols=21 Identities=14% Similarity=0.528 Sum_probs=17.8
Q ss_pred CCceEEEEEEEeecccccCcceEEeecCC
Q psy70 27 KVPFVIQYEVMFQDKHDCGGAYLKLLTEG 55 (88)
Q Consensus 27 ~k~LVvQYEVk~q~~idCGGaYIKLl~~~ 55 (88)
+-||.|||.+ |+|||+.+-+.
T Consensus 772 ~~Pl~~~y~i--------~~G~i~fylAP 792 (798)
T 3k4x_A 772 EAPALFQFDL--------KSGFLQFFLAP 792 (798)
T ss_dssp SSCEEEEEEE--------TTEEEEEEECC
T ss_pred CccEEEEEEE--------cceEEEEEECc
Confidence 6789999999 57899999764
No 13
>3lx2_A DNA polymerase sliding clamp 2; PCNA, DNA processivity factor, trimer, toroidal, DNA replica DNA-binding, DNA binding protein; HET: DNA; 2.40A {Thermococcus kodakarensis}
Probab=27.01 E-value=44 Score=23.63 Aligned_cols=23 Identities=17% Similarity=0.450 Sum_probs=17.6
Q ss_pred cCCceEEEEEEEeecccccCcceEEeecCC
Q psy70 26 VKVPFVIQYEVMFQDKHDCGGAYLKLLTEG 55 (88)
Q Consensus 26 ~~k~LVvQYEVk~q~~idCGGaYIKLl~~~ 55 (88)
.+.||+|||++. +|||++.+-+.
T Consensus 224 ~~~Pl~l~~~i~-------~~g~~~y~laP 246 (259)
T 3lx2_A 224 FDIPLLLKYMVR-------DAGEVSFLIAP 246 (259)
T ss_dssp TTSCEEEEEEET-------TTEEEEEEECC
T ss_pred CCCCEEEEEEeC-------CCeEEEEEEcc
Confidence 358999999984 26799888654
No 14
>3am2_A Heat-labIle enterotoxin B chain; pore forming toxins; 2.51A {Clostridium perfringens} PDB: 2xh6_A* 2yhj_A
Probab=25.20 E-value=64 Score=24.41 Aligned_cols=24 Identities=25% Similarity=0.782 Sum_probs=18.0
Q ss_pred cceEEeecCCCcccccccCCCCCCceEEee
Q psy70 46 GAYLKLLTEGPALQDLTAFNDKTPYTIMFG 75 (88)
Q Consensus 46 GaYIKLl~~~~~~~~~~~f~~~tpY~IMFG 75 (88)
|.|+-.+.+. ..+++.-||+|+|-
T Consensus 294 gqyvlvmkan------ssysgnypysilfq 317 (328)
T 3am2_A 294 GQYVLVMKAN------SSYSGNYPYSILFQ 317 (328)
T ss_dssp EEEEEEEEEC------SCCSSCBCCEEEEE
T ss_pred CcEEEEEecc------CcccCCCchHHHHH
Confidence 5677666653 36889999999995
No 15
>3h0d_A CTSR; protein DNA complex, winged HTH domain, 4-helix bundle, DNA tandem repeat, transcription/DNA complex; HET: DNA; 2.40A {Bacillus stearothermophilus}
Probab=23.90 E-value=27 Score=24.53 Aligned_cols=17 Identities=29% Similarity=0.716 Sum_probs=11.9
Q ss_pred EEEEeecccccCcceEEeec
Q psy70 34 YEVMFQDKHDCGGAYLKLLT 53 (88)
Q Consensus 34 YEVk~q~~idCGGaYIKLl~ 53 (88)
|-|...+| |||||+...
T Consensus 55 Y~VESkRG---GGGyIRI~k 71 (155)
T 3h0d_A 55 YIVESKRG---GGGYIRIMK 71 (155)
T ss_dssp EEEEEECS---TTCEEEEEE
T ss_pred eEEEeecC---CCceEEEEE
Confidence 44555554 899999874
No 16
>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=23.63 E-value=80 Score=18.41 Aligned_cols=57 Identities=16% Similarity=0.107 Sum_probs=27.0
Q ss_pred ccceecCceeeecCCceEEEEEEEeecccccCcceEEeecCCCcccccccCCCCCCceE
Q psy70 14 EASVRAGTCYFHVKVPFVIQYEVMFQDKHDCGGAYLKLLTEGPALQDLTAFNDKTPYTI 72 (88)
Q Consensus 14 ~~s~~l~kpf~~~~k~LVvQYEVk~q~~idCGGaYIKLl~~~~~~~~~~~f~~~tpY~I 72 (88)
++..+-..|.. ..-.|..|+|.....-.-...+...+........+..+...+.|.+
T Consensus 33 sv~l~W~~p~~--~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~ 89 (119)
T 1wfn_A 33 SLKVSWQEPGE--KNGILTGYRISWEEYNRTNTRVTHYLPNVTLEYRVTGLTALTTYTI 89 (119)
T ss_dssp EEEEECCCCTT--CCSCCCEEEEEEEESSCGGGCCCEEECSSCCEEEEESCCTTCEEEE
T ss_pred EEEEEEcCCCC--CCCcEEEEEEEEEECCCCCceEEEEeCCCceEEEEcCCCCCCEEEE
Confidence 34444445542 2234788998876432212222223322211334555666677765
No 17
>3l0w_B Monoubiquitinated proliferating cell nuclear antigen, proliferating cell nuclear antigen; replication, DNA damage, DNA repair; 2.80A {Saccharomyces cerevisiae} PDB: 3l10_B
Probab=22.04 E-value=62 Score=21.83 Aligned_cols=21 Identities=14% Similarity=0.523 Sum_probs=16.7
Q ss_pred CCceEEEEEEEeecccccCcceEEeecCC
Q psy70 27 KVPFVIQYEVMFQDKHDCGGAYLKLLTEG 55 (88)
Q Consensus 27 ~k~LVvQYEVk~q~~idCGGaYIKLl~~~ 55 (88)
+.||.|+|++. +|||+.+-+.
T Consensus 146 ~~Pl~~~~~~~--------~g~~~~~lAP 166 (169)
T 3l0w_B 146 EAPALFQFDLK--------SGFLQFFLAP 166 (169)
T ss_dssp SSCEEEEEEET--------TEEEEEEECC
T ss_pred CCCEEEEEEEC--------CEEEEEEEcc
Confidence 78999999981 6899987553
No 18
>2cxk_A Camta1, calmodulin binding transcription activator 1; structural genomics, TIG/IPT domain, NPPSFA; 1.85A {Homo sapiens} SCOP: b.1.18.1
Probab=21.25 E-value=1.1e+02 Score=18.98 Aligned_cols=37 Identities=11% Similarity=0.038 Sum_probs=26.0
Q ss_pred EEEEeecccccCcceEEeecCCCcccccccCCCCCCceEEeecCC
Q psy70 34 YEVMFQDKHDCGGAYLKLLTEGPALQDLTAFNDKTPYTIMFGPDK 78 (88)
Q Consensus 34 YEVk~q~~idCGGaYIKLl~~~~~~~~~~~f~~~tpY~IMFGPD~ 78 (88)
.++.-+.+-..||.-|-+-+.. ++..+.|.+|||---
T Consensus 10 td~sP~~gp~sGGTkv~I~G~~--------L~~gs~~~~~fG~~~ 46 (95)
T 2cxk_A 10 TDYSPEWSYPEGGVKVLITGPW--------QEASNNYSCLFDQIS 46 (95)
T ss_dssp CEEECSEECTTCCCEEEEESSC--------CCCSSCEEEEETTEE
T ss_pred EEECCCcccCCCCEEEEEEeEC--------CCCCccEEEEECCEE
Confidence 4566777888899888777642 223357999999744
No 19
>3pge_A SUMO-modified proliferating cell nuclear antigen; DNA replication, DNA binding protein; 2.80A {Saccharomyces cerevisiae}
Probab=20.21 E-value=69 Score=22.91 Aligned_cols=21 Identities=14% Similarity=0.523 Sum_probs=17.2
Q ss_pred CCceEEEEEEEeecccccCcceEEeecCC
Q psy70 27 KVPFVIQYEVMFQDKHDCGGAYLKLLTEG 55 (88)
Q Consensus 27 ~k~LVvQYEVk~q~~idCGGaYIKLl~~~ 55 (88)
+.||.|.|++. +|||+.+-+.
T Consensus 174 ~~Pl~l~y~i~--------~G~l~f~LAP 194 (200)
T 3pge_A 174 EAPALFQFDLK--------SGFLQFFLAP 194 (200)
T ss_dssp SSCEEEEEEET--------TEEEEEEECC
T ss_pred CCCEEEEEEEC--------CEEEEEEECC
Confidence 78999999982 6899988664
Done!