Query psy7003
Match_columns 1520
No_of_seqs 575 out of 4044
Neff 5.5
Searched_HMMs 46136
Date Sat Aug 17 00:20:29 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7003.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/7003hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0430|consensus 100.0 9E-233 2E-237 2116.6 89.2 1064 20-1519 1-1172(1257)
2 TIGR02969 mam_aldehyde_ox alde 100.0 5E-214 1E-218 2095.1 109.0 1079 21-1519 2-1227(1330)
3 PLN00192 aldehyde oxidase 100.0 4E-212 1E-216 2077.8 108.2 1065 20-1519 4-1242(1344)
4 PLN02906 xanthine dehydrogenas 100.0 4E-211 8E-216 2069.3 107.0 1076 40-1519 1-1229(1319)
5 PRK09800 putative hypoxanthine 100.0 8E-158 2E-162 1516.1 87.6 630 741-1519 171-883 (956)
6 TIGR03313 Se_sel_red_Mo probab 100.0 9E-155 2E-159 1489.2 86.7 630 741-1519 167-879 (951)
7 TIGR03311 Se_dep_Molyb_1 selen 100.0 2E-149 4E-154 1432.0 81.2 594 742-1515 162-778 (848)
8 COG4631 XdhB Xanthine dehydrog 100.0 4E-132 8E-137 1141.4 45.9 628 739-1517 16-691 (781)
9 TIGR02965 xanthine_xdhB xanthi 100.0 1E-127 3E-132 1222.8 68.8 628 742-1519 1-676 (758)
10 PRK09970 xanthine dehydrogenas 100.0 4E-123 8E-128 1183.8 69.3 635 741-1519 2-684 (759)
11 TIGR02416 CO_dehy_Mo_lg carbon 100.0 1E-122 3E-127 1179.0 68.9 626 750-1519 1-699 (770)
12 TIGR03194 4hydrxCoA_A 4-hydrox 100.0 3E-122 6E-127 1171.6 67.4 621 746-1519 1-677 (746)
13 TIGR03196 pucD xanthine dehydr 100.0 8E-122 2E-126 1169.4 67.6 632 741-1519 2-702 (768)
14 COG1529 CoxL Aerobic-type carb 100.0 6.6E-93 1.4E-97 900.6 59.6 616 739-1516 3-657 (731)
15 PF02738 Ald_Xan_dh_C2: Molybd 100.0 1.1E-93 2.4E-98 887.4 48.5 479 943-1519 23-537 (547)
16 TIGR02963 xanthine_xdhA xanthi 100.0 1E-76 2.2E-81 718.4 34.9 338 22-673 1-360 (467)
17 COG4630 XdhA Xanthine dehydrog 100.0 2.7E-72 5.8E-77 629.1 30.4 379 19-710 6-482 (493)
18 PRK09908 xanthine dehydrogenas 100.0 4.2E-50 9E-55 417.6 18.6 153 16-228 3-156 (159)
19 TIGR03193 4hydroxCoAred 4-hydr 100.0 3.9E-50 8.5E-55 413.9 17.4 147 22-228 2-148 (148)
20 COG2080 CoxS Aerobic-type carb 100.0 8.6E-50 1.9E-54 410.7 16.8 151 20-229 2-152 (156)
21 TIGR03198 pucE xanthine dehydr 100.0 6.7E-49 1.5E-53 407.8 17.4 148 21-229 3-150 (151)
22 PRK11433 aldehyde oxidoreducta 100.0 9.2E-48 2E-52 417.2 18.3 167 19-230 49-215 (217)
23 PRK09971 xanthine dehydrogenas 99.9 2.1E-27 4.6E-32 274.1 15.5 146 517-672 6-174 (291)
24 PF01315 Ald_Xan_dh_C: Aldehyd 99.9 1.5E-27 3.2E-32 238.5 9.9 111 756-903 1-111 (111)
25 PF01799 Fer2_2: [2Fe-2S] bind 99.9 9.8E-28 2.1E-32 222.7 7.6 75 104-226 1-75 (75)
26 TIGR03195 4hydrxCoA_B 4-hydrox 99.9 4.5E-26 9.8E-31 264.7 15.2 148 515-672 4-213 (321)
27 COG4630 XdhA Xanthine dehydrog 99.9 7.1E-27 1.5E-31 264.2 5.6 98 295-394 6-168 (493)
28 PF00941 FAD_binding_5: FAD bi 99.9 3.6E-26 7.8E-31 245.0 10.3 148 515-672 2-171 (171)
29 TIGR03199 pucC xanthine dehydr 99.9 3.8E-25 8.3E-30 252.2 15.5 139 521-672 1-160 (264)
30 PRK09799 putative oxidoreducta 99.9 5.5E-25 1.2E-29 250.0 14.6 167 517-700 4-237 (258)
31 COG1319 CoxM Aerobic-type carb 99.9 5.4E-25 1.2E-29 250.5 14.2 147 516-672 4-173 (284)
32 TIGR03312 Se_sel_red_FAD proba 99.9 8.5E-25 1.8E-29 248.2 14.7 168 517-701 3-237 (257)
33 KOG0430|consensus 99.8 1.5E-20 3.2E-25 236.2 6.4 97 297-395 2-164 (1257)
34 TIGR03193 4hydroxCoAred 4-hydr 99.8 2.4E-20 5.2E-25 193.5 5.8 90 298-390 2-146 (148)
35 PRK09908 xanthine dehydrogenas 99.8 3.9E-20 8.4E-25 193.8 5.9 93 294-390 5-154 (159)
36 TIGR03198 pucE xanthine dehydr 99.8 2.8E-19 6.2E-24 186.9 5.4 93 297-392 3-149 (151)
37 TIGR02963 xanthine_xdhA xanthi 99.7 6.1E-19 1.3E-23 215.4 5.3 90 298-389 1-155 (467)
38 PLN00192 aldehyde oxidase 99.7 1.1E-18 2.4E-23 234.7 5.7 98 295-394 3-178 (1344)
39 TIGR02969 mam_aldehyde_ox alde 99.7 1.6E-18 3.5E-23 232.9 5.4 96 297-394 2-163 (1330)
40 PRK11433 aldehyde oxidoreducta 99.7 4.2E-18 9.2E-23 186.3 5.5 95 295-392 49-213 (217)
41 COG2080 CoxS Aerobic-type carb 99.7 2.3E-17 5E-22 171.4 4.9 91 297-390 3-149 (156)
42 PRK09800 putative hypoxanthine 99.6 1.8E-15 3.9E-20 197.8 5.1 90 298-391 3-148 (956)
43 PLN02906 xanthine dehydrogenas 99.5 1.6E-15 3.6E-20 204.3 2.4 77 316-394 1-144 (1319)
44 TIGR03311 Se_dep_Molyb_1 selen 99.5 3.6E-15 7.9E-20 193.9 4.3 89 298-391 1-143 (848)
45 TIGR03313 Se_sel_red_Mo probab 99.5 1.6E-14 3.4E-19 189.3 4.2 88 300-391 1-144 (951)
46 COG1529 CoxL Aerobic-type carb 99.3 2.8E-13 6E-18 174.3 2.7 348 954-1401 323-713 (731)
47 PRK12386 fumarate reductase ir 99.0 5.2E-10 1.1E-14 127.1 7.1 77 29-123 20-101 (251)
48 PRK05950 sdhB succinate dehydr 98.5 1.8E-07 3.9E-12 105.8 6.3 69 29-110 18-91 (232)
49 PF01799 Fer2_2: [2Fe-2S] bind 98.3 9.5E-08 2.1E-12 89.8 0.0 39 350-389 10-74 (75)
50 TIGR00384 dhsB succinate dehyd 98.3 7.7E-07 1.7E-11 99.9 5.8 69 29-110 15-87 (220)
51 PRK12576 succinate dehydrogena 98.3 8.6E-07 1.9E-11 102.9 6.2 70 29-110 25-100 (279)
52 PF13085 Fer2_3: 2Fe-2S iron-s 98.0 8.4E-06 1.8E-10 82.2 6.6 70 29-110 19-94 (110)
53 PF13510 Fer2_4: 2Fe-2S iron-s 98.0 1.1E-05 2.4E-10 77.3 6.9 71 20-105 2-80 (82)
54 PRK12385 fumarate reductase ir 97.9 1.3E-05 2.9E-10 91.5 6.0 68 29-110 25-96 (244)
55 cd00207 fer2 2Fe-2S iron-sulfu 97.8 2E-05 4.3E-10 74.6 4.3 69 22-94 1-77 (84)
56 PRK08493 NADH dehydrogenase su 97.6 7.9E-05 1.7E-09 97.5 7.4 96 22-136 2-102 (819)
57 PRK12814 putative NADPH-depend 97.5 0.00016 3.5E-09 93.5 7.9 93 20-134 2-101 (652)
58 COG0479 FrdB Succinate dehydro 97.5 0.00013 2.8E-09 82.4 5.9 69 29-110 20-92 (234)
59 PF00111 Fer2: 2Fe-2S iron-sul 97.5 0.00012 2.6E-09 68.7 4.6 48 24-74 1-49 (78)
60 PRK12577 succinate dehydrogena 97.5 0.00067 1.5E-08 80.9 11.6 70 29-110 19-101 (329)
61 PRK13552 frdB fumarate reducta 97.4 0.00022 4.7E-09 81.5 6.0 69 29-110 24-96 (239)
62 PRK07569 bidirectional hydroge 97.4 0.00048 1E-08 78.4 8.6 95 20-136 2-106 (234)
63 PRK08640 sdhB succinate dehydr 97.3 0.00027 5.8E-09 81.2 6.1 68 29-110 23-101 (249)
64 PRK07570 succinate dehydrogena 97.3 0.00024 5.2E-09 81.5 5.7 80 29-123 20-114 (250)
65 PRK12575 succinate dehydrogena 97.1 0.0006 1.3E-08 77.7 6.1 68 29-110 23-94 (235)
66 PLN00129 succinate dehydrogena 97.1 0.00064 1.4E-08 78.9 5.8 68 30-110 63-135 (276)
67 PRK06259 succinate dehydrogena 97.0 0.0011 2.5E-08 82.9 7.9 64 29-106 21-88 (486)
68 PRK10713 2Fe-2S ferredoxin Yfa 96.3 0.0076 1.6E-07 58.2 5.9 48 21-73 3-50 (84)
69 PRK07860 NADH dehydrogenase su 96.2 0.0069 1.5E-07 80.3 6.6 99 21-136 4-109 (797)
70 CHL00134 petF ferredoxin; Vali 96.1 0.01 2.3E-07 59.0 5.9 44 27-74 13-56 (99)
71 PTZ00490 Ferredoxin superfamil 96.1 0.0093 2E-07 63.2 5.6 86 19-107 33-138 (143)
72 PTZ00305 NADH:ubiquinone oxido 95.8 0.023 5E-07 66.2 7.9 98 18-135 65-171 (297)
73 TIGR02008 fdx_plant ferredoxin 95.8 0.016 3.5E-07 57.4 5.7 48 22-73 5-53 (97)
74 PRK09129 NADH dehydrogenase su 95.2 0.026 5.7E-07 74.8 6.7 100 22-139 2-107 (776)
75 PLN03136 Ferredoxin; Provision 95.1 0.034 7.4E-07 59.3 5.7 48 22-73 57-104 (148)
76 TIGR01973 NuoG NADH-quinone ox 94.9 0.033 7.2E-07 71.8 6.0 92 24-136 1-102 (603)
77 PRK11872 antC anthranilate dio 94.9 0.034 7.4E-07 66.7 5.6 48 22-73 3-53 (340)
78 PRK09130 NADH dehydrogenase su 94.4 0.068 1.5E-06 70.0 7.0 96 22-136 2-105 (687)
79 PRK08166 NADH dehydrogenase su 93.9 0.084 1.8E-06 70.8 6.7 102 22-136 2-109 (847)
80 PTZ00038 ferredoxin; Provision 93.9 0.086 1.9E-06 58.4 5.6 48 21-73 97-145 (191)
81 TIGR02160 PA_CoA_Oxy5 phenylac 93.8 0.097 2.1E-06 62.9 6.4 52 20-74 263-314 (352)
82 cd00207 fer2 2Fe-2S iron-sulfu 93.7 0.076 1.6E-06 50.2 4.2 50 298-351 1-50 (84)
83 PLN02593 adrenodoxin-like ferr 93.2 0.11 2.5E-06 53.3 4.9 81 21-105 2-101 (117)
84 PRK10684 HCP oxidoreductase, N 92.9 0.12 2.5E-06 61.9 5.1 50 21-74 248-297 (332)
85 TIGR01941 nqrF NADH:ubiquinone 92.9 0.072 1.6E-06 65.5 3.3 62 9-74 19-82 (405)
86 PRK07609 CDP-6-deoxy-delta-3,4 92.8 0.11 2.4E-06 62.2 4.6 47 21-73 4-50 (339)
87 PF00111 Fer2: 2Fe-2S iron-sul 92.3 0.14 3.1E-06 48.0 3.9 48 301-351 2-50 (78)
88 PRK05464 Na(+)-translocating N 91.9 0.14 3E-06 63.2 4.0 51 19-73 33-85 (409)
89 COG0633 Fdx Ferredoxin [Energy 91.3 0.29 6.3E-06 49.1 4.9 48 24-74 7-54 (102)
90 TIGR02007 fdx_isc ferredoxin, 90.7 0.32 7E-06 49.4 4.6 37 36-74 19-56 (110)
91 PF13510 Fer2_4: 2Fe-2S iron-s 90.6 0.36 7.8E-06 46.6 4.6 51 296-350 2-60 (82)
92 PRK12386 fumarate reductase ir 90.5 0.27 5.8E-06 57.0 4.3 39 312-351 25-68 (251)
93 PRK05713 hypothetical protein; 89.6 0.47 1E-05 56.4 5.5 45 23-73 3-47 (312)
94 PF01565 FAD_binding_4: FAD bi 89.2 0.89 1.9E-05 47.2 6.6 80 517-597 3-83 (139)
95 COG3383 Uncharacterized anaero 88.4 0.84 1.8E-05 58.8 6.7 97 21-136 5-106 (978)
96 COG1034 NuoG NADH dehydrogenas 88.0 0.77 1.7E-05 59.9 6.2 98 22-136 2-104 (693)
97 KOG2282|consensus 86.5 1.3 2.9E-05 54.7 6.6 101 19-137 30-136 (708)
98 PRK14653 UDP-N-acetylenolpyruv 81.7 4 8.8E-05 48.6 7.9 79 516-598 35-113 (297)
99 TIGR01676 GLDHase galactonolac 81.4 1.6 3.4E-05 55.8 4.6 80 516-597 63-143 (541)
100 PRK09970 xanthine dehydrogenas 81.2 35 0.00075 46.0 17.1 59 970-1028 458-529 (759)
101 TIGR01372 soxA sarcosine oxida 80.9 4 8.6E-05 56.1 8.5 82 19-111 10-100 (985)
102 TIGR03194 4hydrxCoA_A 4-hydrox 80.4 29 0.00063 46.6 15.9 56 972-1027 444-511 (746)
103 PRK13905 murB UDP-N-acetylenol 80.1 4.7 0.0001 48.0 7.7 80 516-598 32-112 (298)
104 PRK05950 sdhB succinate dehydr 80.0 1.3 2.9E-05 50.7 3.0 39 312-350 23-66 (232)
105 PRK13906 murB UDP-N-acetylenol 79.7 5 0.00011 48.0 7.8 78 516-597 38-116 (307)
106 PRK12436 UDP-N-acetylenolpyruv 77.5 5.9 0.00013 47.4 7.5 79 516-598 38-117 (305)
107 PRK14650 UDP-N-acetylenolpyruv 76.2 6.5 0.00014 47.0 7.3 79 516-597 34-113 (302)
108 PRK14652 UDP-N-acetylenolpyruv 75.9 7 0.00015 46.7 7.5 80 516-598 37-117 (302)
109 TIGR00384 dhsB succinate dehyd 74.2 3.3 7.1E-05 47.1 4.0 39 312-350 20-62 (220)
110 TIGR01679 bact_FAD_ox FAD-link 73.2 7.4 0.00016 48.5 7.2 78 516-597 13-90 (419)
111 TIGR01678 FAD_lactone_ox sugar 70.1 7.2 0.00016 48.9 6.1 80 516-597 16-96 (438)
112 PTZ00490 Ferredoxin superfamil 70.0 7.3 0.00016 41.7 5.2 65 283-350 21-89 (143)
113 KOG3049|consensus 67.0 2.2 4.8E-05 47.7 0.6 45 39-93 75-123 (288)
114 TIGR00387 glcD glycolate oxida 66.7 8.3 0.00018 47.9 5.6 79 519-597 2-81 (413)
115 TIGR02008 fdx_plant ferredoxin 66.6 7.3 0.00016 38.7 4.2 50 297-350 4-54 (97)
116 TIGR02416 CO_dehy_Mo_lg carbon 66.4 50 0.0011 44.6 13.0 123 1317-1479 192-316 (770)
117 TIGR00179 murB UDP-N-acetyleno 65.7 18 0.00038 42.9 7.8 79 516-597 14-93 (284)
118 PRK11230 glycolate oxidase sub 65.5 15 0.00031 47.0 7.5 81 517-597 58-139 (499)
119 PRK00046 murB UDP-N-acetylenol 65.4 13 0.00028 45.2 6.6 101 516-627 22-128 (334)
120 PLN02805 D-lactate dehydrogena 64.5 15 0.00033 47.5 7.4 82 517-598 136-218 (555)
121 PLN02465 L-galactono-1,4-lacto 64.3 11 0.00024 48.8 6.2 81 516-598 98-179 (573)
122 PRK12576 succinate dehydrogena 62.4 8.4 0.00018 45.6 4.3 40 312-351 30-73 (279)
123 COG0277 GlcD FAD/FMN-containin 62.2 11 0.00023 46.9 5.4 80 517-597 34-114 (459)
124 CHL00134 petF ferredoxin; Vali 62.1 13 0.00028 37.2 4.9 44 303-350 13-56 (99)
125 PRK14648 UDP-N-acetylenolpyruv 61.4 18 0.00039 44.2 6.9 81 516-597 31-114 (354)
126 TIGR01677 pln_FAD_oxido plant- 60.6 18 0.00039 46.9 7.1 81 517-597 34-118 (557)
127 PRK13903 murB UDP-N-acetylenol 60.4 26 0.00057 43.0 8.1 77 516-597 34-113 (363)
128 PF13085 Fer2_3: 2Fe-2S iron-s 59.8 11 0.00023 38.8 4.0 40 312-351 24-67 (110)
129 PRK07569 bidirectional hydroge 58.6 16 0.00034 42.1 5.5 49 297-349 3-55 (234)
130 PRK12385 fumarate reductase ir 58.1 9.8 0.00021 44.2 3.8 39 312-350 30-72 (244)
131 PF02738 Ald_Xan_dh_C2: Molybd 54.8 56 0.0012 42.2 10.2 124 1316-1481 50-176 (547)
132 PRK10713 2Fe-2S ferredoxin Yfa 54.8 12 0.00025 36.4 3.1 47 298-349 4-50 (84)
133 TIGR02965 xanthine_xdhB xanthi 52.6 19 0.0004 48.4 5.6 58 971-1028 446-515 (758)
134 PRK14649 UDP-N-acetylenolpyruv 52.5 44 0.00095 40.0 8.1 79 516-597 22-103 (295)
135 COG2871 NqrF Na+-transporting 50.9 12 0.00025 44.1 2.8 53 19-74 34-87 (410)
136 TIGR03196 pucD xanthine dehydr 48.3 32 0.00069 46.4 6.7 55 974-1028 467-535 (768)
137 PRK12814 putative NADPH-depend 46.9 27 0.00058 46.1 5.6 50 296-350 2-56 (652)
138 PRK06259 succinate dehydrogena 45.1 22 0.00047 45.1 4.3 38 312-349 26-67 (486)
139 PF02594 DUF167: Uncharacteris 41.9 66 0.0014 31.1 5.9 52 1318-1370 17-68 (77)
140 PRK11183 D-lactate dehydrogena 41.8 36 0.00079 43.8 5.4 79 517-598 41-127 (564)
141 PLN03136 Ferredoxin; Provision 40.4 36 0.00079 36.8 4.4 36 312-349 69-104 (148)
142 PRK10684 HCP oxidoreductase, N 40.3 41 0.00088 40.5 5.4 49 297-349 248-296 (332)
143 PRK00054 dihydroorotate dehydr 39.6 12 0.00026 43.0 0.7 19 57-75 214-232 (250)
144 PTZ00038 ferredoxin; Provision 39.2 40 0.00087 37.9 4.7 50 296-349 96-145 (191)
145 PRK05713 hypothetical protein; 38.4 38 0.00082 40.4 4.7 46 297-348 1-46 (312)
146 PRK08053 sulfur carrier protei 38.2 64 0.0014 29.8 5.1 38 23-75 2-39 (66)
147 cd06192 DHOD_e_trans_like FAD/ 36.4 21 0.00045 40.8 2.0 19 56-74 212-230 (243)
148 TIGR01941 nqrF NADH:ubiquinone 34.9 41 0.0009 41.7 4.4 53 294-350 28-82 (405)
149 TIGR02160 PA_CoA_Oxy5 phenylac 34.4 62 0.0013 39.2 5.7 54 294-350 261-314 (352)
150 PRK05464 Na(+)-translocating N 34.1 43 0.00094 41.6 4.4 52 294-349 32-85 (409)
151 COG2104 ThiS Sulfur transfer p 34.0 97 0.0021 29.3 5.6 41 20-75 1-41 (68)
152 PLN02593 adrenodoxin-like ferr 33.9 49 0.0011 34.3 4.0 47 298-348 3-51 (117)
153 PRK11872 antC anthranilate dio 32.9 52 0.0011 39.8 4.7 43 303-349 11-53 (340)
154 PLN02441 cytokinin dehydrogena 32.2 96 0.0021 40.1 7.0 79 517-596 67-154 (525)
155 PRK07440 hypothetical protein; 31.4 62 0.0013 30.5 3.9 40 21-75 4-43 (70)
156 PF03450 CO_deh_flav_C: CO deh 31.3 29 0.00062 34.6 1.8 18 684-702 74-91 (103)
157 PRK14651 UDP-N-acetylenolpyruv 30.7 1.4E+02 0.0029 35.7 7.4 72 515-597 20-91 (273)
158 PRK06083 sulfur carrier protei 30.5 73 0.0016 31.3 4.3 48 13-75 10-57 (84)
159 PRK13552 frdB fumarate reducta 30.0 63 0.0014 37.5 4.5 40 312-351 29-72 (239)
160 PRK08364 sulfur carrier protei 29.0 1.3E+02 0.0028 28.2 5.6 41 22-75 5-47 (70)
161 COG0812 MurB UDP-N-acetylmuram 28.2 1.4E+02 0.003 35.9 6.9 103 516-627 22-127 (291)
162 PRK11282 glcE glycolate oxidas 28.0 1.2E+02 0.0025 37.4 6.5 69 525-597 8-76 (352)
163 TIGR02007 fdx_isc ferredoxin, 27.4 44 0.00096 34.1 2.4 36 312-349 19-55 (110)
164 cd06219 DHOD_e_trans_like1 FAD 27.1 35 0.00076 39.3 1.8 19 56-74 212-230 (248)
165 TIGR02911 sulfite_red_B sulfit 27.1 25 0.00053 41.0 0.6 17 55-71 224-240 (261)
166 PRK07860 NADH dehydrogenase su 26.9 86 0.0019 42.5 5.6 51 295-349 2-56 (797)
167 TIGR01683 thiS thiamine biosyn 25.6 1.2E+02 0.0026 27.8 4.6 37 24-75 1-37 (64)
168 PRK12577 succinate dehydrogena 25.6 74 0.0016 38.6 4.3 39 312-350 24-66 (329)
169 PRK05863 sulfur carrier protei 24.8 76 0.0016 29.3 3.2 38 23-75 2-39 (65)
170 PRK07609 CDP-6-deoxy-delta-3,4 24.1 94 0.002 37.4 4.8 47 298-350 5-51 (339)
171 cd06220 DHOD_e_trans_like2 FAD 23.7 38 0.00082 38.5 1.2 17 58-74 201-217 (233)
172 PRK05659 sulfur carrier protei 22.6 88 0.0019 28.6 3.2 37 23-74 2-38 (66)
173 PRK05802 hypothetical protein; 22.6 48 0.001 40.0 1.9 19 56-74 288-306 (320)
174 PRK08640 sdhB succinate dehydr 22.4 90 0.002 36.5 4.0 40 312-351 28-78 (249)
175 PRK00647 hypothetical protein; 22.3 1.8E+02 0.0039 29.5 5.4 44 1327-1370 26-69 (96)
176 PF10418 DHODB_Fe-S_bind: Iron 21.7 55 0.0012 27.8 1.5 19 57-75 3-21 (40)
177 PRK12575 succinate dehydrogena 21.6 1.1E+02 0.0024 35.6 4.4 37 315-351 32-71 (235)
178 PRK08493 NADH dehydrogenase su 21.2 1.2E+02 0.0027 41.2 5.3 48 297-349 1-53 (819)
179 PRK05090 hypothetical protein; 21.0 2E+02 0.0043 29.1 5.4 44 1327-1370 31-74 (95)
180 PRK08221 anaerobic sulfite red 20.9 35 0.00076 39.8 0.3 16 56-71 227-242 (263)
181 PRK01530 hypothetical protein; 20.2 1.9E+02 0.0042 29.7 5.3 44 1327-1370 38-81 (105)
182 cd00565 ThiS ThiaminS ubiquiti 20.1 2.1E+02 0.0045 26.3 5.1 37 24-75 2-38 (65)
No 1
>KOG0430|consensus
Probab=100.00 E-value=9e-233 Score=2116.61 Aligned_cols=1064 Identities=36% Similarity=0.585 Sum_probs=965.6
Q ss_pred eEEEEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEECCccCCCCcccccccccchhhHHhcCC
Q psy7003 20 STVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTSSHPVTGVDSTYSVNACLVLVHMCGG 99 (1520)
Q Consensus 20 ~~~~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~~~~~~~~~~~~~~~v~scl~~~~~~~g 99 (1520)
|.+.|.|||+++++. ++||++||+.|||++++|||||+||+|||||||||+|+++||.+ +++|++|||||+|+++++|
T Consensus 1 ~~l~F~VNG~~~~~~-~vdP~~TL~~fLR~k~~ltgtKlgC~EGGCGaCtv~ls~~dp~~-~~~~~avNsCLt~l~s~~g 78 (1257)
T KOG0430|consen 1 MELVFAINGKRVEVE-LLPPDLTLNTFLREKLGLTGTKLGCGEGGCGACTVVLSKYDPEL-KVRHWAVNSCLTLLNSVHG 78 (1257)
T ss_pred CceEEEECCEEeeEe-cCCcchhHHHHHHHhcCCcceeeccCCCCccceEEEEeccCCCc-eeEEeehhhhhhhcccccc
Confidence 458999999999986 89999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred cEEEEecCCCCCCCCCCHHHHHHHHhCCCCCCCCchhHHHHHhhhhccccccccCCcchhhHHhhhhhccCCCcchhHHH
Q psy7003 100 WAITTVEGLGSKKKGYHNVQTRLATMNGSQCGYCSPGMVMAMYSRHRLTASTMCGHNFTKTLLLQMYCIFLPPFSLEVLF 179 (1520)
Q Consensus 100 ~~i~T~eg~~~~~~~~h~vq~~~~~~~~~qcg~ctpg~vm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (1520)
++|||+||||+++++|||||+|||++||+|||||||||||+||+
T Consensus 79 ~~VtT~EGlGn~~~g~HPiq~RlA~~hgsQCGFCtPG~vmsmYa------------------------------------ 122 (1257)
T KOG0430|consen 79 LEVTTSEGLGNRRDGYHPIQERLAKMHGSQCGFCTPGFVMSMYA------------------------------------ 122 (1257)
T ss_pred eEEEeeecccccccCcCcHHHHHhhccCCcccCCCccHHHHHHH------------------------------------
Confidence 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCHHHHHHHhcCCccCCCCcHHHHHHHHHhhhhcCccccccccccccccccccccccccccc
Q psy7003 180 VILLIFVIVSFLEGKKYKVTKSEVEGALGGNICRCTGFRPILDAFQSFSCDASDSVQRKCADIEVRGKRDFISHESLGTQ 259 (1520)
Q Consensus 180 ~~~~~~~~~~~l~~~~~~~~~~~i~~~~~gn~crctgy~~i~~a~~~~~~~~~~~~~~~~~d~e~~~~~~~~~~~~~~~~ 259 (1520)
+|++.+..+|++|||.+|+||||||||||||+||+|+||.|.+ +++
T Consensus 123 ----------lL~n~~~~~T~~eie~a~~GNLCRCTGYRPIldA~kSFa~d~~---------~~~--------------- 168 (1257)
T KOG0430|consen 123 ----------LLRNSKNSPTMEEIENAFGGNLCRCTGYRPILDAMKSFAVDSD---------ICG--------------- 168 (1257)
T ss_pred ----------HHHhCCCCCCHHHHHHhhccceeeecCCchHHHHHhhhccCCC---------ccc---------------
Confidence 7777766789999999999999999999999999999996642 111
Q ss_pred ccccccccchhhhhhhhhcccccccccccccccCCCcceEEEECCEEEEecccCCCCcchhHHHHhhhcccCccccccCC
Q psy7003 260 LLDWAFDTLVFSVLEFRLATLIIVPILLPRLFSDTSSTVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREG 339 (1520)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~f~~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~~g 339 (1520)
.|
T Consensus 169 ------------------------------------------------------------------------------~g 170 (1257)
T KOG0430|consen 169 ------------------------------------------------------------------------------PG 170 (1257)
T ss_pred ------------------------------------------------------------------------------cC
Confidence 11
Q ss_pred CccceeeeeccCCCcccccccccccccccccccCccccccCCccchhhhhcccCCCCcccccccccccccccccccccCC
Q psy7003 340 GCGVCTVTVTSSHPVTGVDSTYSVNACGDRCFTRNICRCTGFRPILDAFQSFSCDASDSVQRKCADIEVRGKRDFISHEG 419 (1520)
Q Consensus 340 ~cGactV~v~~~hpvq~~~~~~~~~~Cg~~C~~gNLCRCTgyrpIlda~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (1520)
|. +.|++ .-+.+
T Consensus 171 --------------------------~~------~~~~~-~~~~~----------------------------------- 182 (1257)
T KOG0430|consen 171 --------------------------CD------GFSIA-EEKDI----------------------------------- 182 (1257)
T ss_pred --------------------------cc------ccccc-ccccc-----------------------------------
Confidence 11 22232 00100
Q ss_pred CCCCCCChhhhcccccccccCCCCCCccccccccCCCCccceeecCCCCCCcccccccccccccccccccccccCCCCch
Q psy7003 420 LPEPEYDPTYRKNLAVSLFYKSHINPSIHNRTVMGRGDVRSLFFGSSTLGEVPTRYKLDLMGSCKLKTKLDQSEDSNDLD 499 (1520)
Q Consensus 420 ~~~~~~~~~~~~~l~~~~~y~~s~epi~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 499 (1520)
+..+ .+|||++++||||+++.. ... ..++
T Consensus 183 ------------~~~~-~~~dp~~~~i~~pe~~~~--~~~-~~~~----------------------------------- 211 (1257)
T KOG0430|consen 183 ------------EDLS-PPYDPKKELIFPPELLKR--KKT-TLLG----------------------------------- 211 (1257)
T ss_pred ------------cccc-CCCCCccCcccChHHhcc--ccc-cccC-----------------------------------
Confidence 0112 479999999999998753 111 1111
Q ss_pred hhhhhhccccccccCccEEEEcCCHHHHHHHHhcCCCCCCcEEEEecchhhhccCCCCCCeeeeCCCcccccceEEeCCe
Q psy7003 500 TCLIELALTPVNVNVEGIWYIVTEVREIFEIFDGLEANQTYMLVGGNTGYGVYRPRVPVDVYIQIRDIKELRQIFTRNGY 579 (1520)
Q Consensus 500 ~~~~~~a~~~~~i~~~~~~~rPtSLeEal~ll~~~p~~~~a~lVAGGTdLgv~~k~~~~~~lIdIs~I~EL~~I~~~~~~ 579 (1520)
+++.+||.|.||+|+++++++++ .+++|+|||..+++++.+..+.+||+++|+||+.+..++++
T Consensus 212 -------------~~~~~W~~P~sl~eL~~~~~~~~---~~~Lv~GNT~~gv~~r~~~~~~~Id~~~v~el~~~~~~~~g 275 (1257)
T KOG0430|consen 212 -------------NDGIRWYWPVSLEELFELKANKP---DAKLVAGNTAHGVYRRSPDYQKFIDVSGVPELKALNVDDNG 275 (1257)
T ss_pred -------------CCCcEEeCcccHHHHHHHHhcCc---ceEEEeccccceEEeccCCCcceechhcCchhhhcccCCCc
Confidence 14688999999999999999888 89999999999999998889999999999999988888999
Q ss_pred EEEccccCHHHHHHhhhhccCCchhhhhHHHHHHHHHhhcchhHhccc---ccCCCCCC----CCCcc-----CCcEEEE
Q psy7003 580 VLMGSATTLTEAMDYFDRTSKTDANFEYMRIMKDHLEQVAHYAVRNFA---LGLSTTEV----SPSLW-----SGARMIQ 647 (1520)
Q Consensus 580 L~IGA~vTlsel~e~L~~~~~~~~~~~~~~~La~al~~IAs~qIRN~A---GNL~~asp----~SDL~-----lgA~V~I 647 (1520)
|++||++|++++++++++..+ ...+++|+.+.+|+++||++||||.| |||+.+.+ +||++ ++|+|++
T Consensus 276 i~lGa~~sls~~~~~l~~~~~-~~~~~~~~~~~~hl~~~A~~~IRN~atigGnI~~~~~~~~f~SDl~~~l~a~~a~v~~ 354 (1257)
T KOG0430|consen 276 LELGAALSLSETMELLRKLVK-RPGFEYFKALWEHLKWFANVQIRNVGTIGGNICTKAQSPEFPSDLFILLEALDAKVTI 354 (1257)
T ss_pred eEEcccccHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHhcccceeccccccceeEeccCCCCCchhHHHHHHhhccEEEE
Confidence 999999999999999998876 44458999999999999999999999 99998866 99999 9999999
Q ss_pred EecCceee---ccccc-----cCce-eeeeeCCCCcc----------------------------cccccccc-------
Q psy7003 648 IERAMSQG---SEDFE-----TKQN-LWPLTKPLPKI----------------------------DAITQCAG------- 683 (1520)
Q Consensus 648 ~s~~g~R~---l~dFf-----~~EI-tsI~IP~~~~~----------------------------~~arIa~G------- 683 (1520)
.+..+... +++|+ +++| .+|.||.+.+- +++||+||
T Consensus 355 ~~~~~~~~~~~l~~y~~~~l~~~~illsv~ip~~~~~f~~~k~a~R~e~a~a~vNa~fl~e~~~V~~~~i~fGg~~p~~i 434 (1257)
T KOG0430|consen 355 LNNSGDLEKVFLEEYLGSSLGAKEILLSVVLPASRKYFESYKQAPRRENAIAYVNAAFLAEVGKVSSARICFGGIAPDFI 434 (1257)
T ss_pred eecCCccceeeHhhhhccccCcceEEEEEEccCcHHHHHHHHhcccccchhhhhhHHhhhccceeeeeeEeecCcCcchh
Confidence 98766422 77777 6888 99999986432 57899999
Q ss_pred ----------------------------cccccCCCCCCcHHHHH--------HHHHhhcCCCc-cccccchhhhhcccC
Q psy7003 684 ----------------------------EAEYVNDLPQLSEEYFA--------SVVLAERGPAK-IQSIDSTLALVSCAM 726 (1520)
Q Consensus 684 ----------------------------El~p~~d~P~gS~EYRr--------KF~L~v~~~~~-i~~~~s~~~~~~~~~ 726 (1520)
++.|++ |++|++||+ ||||.+.++.+ .++-.++.....+|+
T Consensus 435 ~a~~~~~~~~gk~~~~~ll~~a~~lL~~~l~~~~--p~~~~~yR~~La~sfffKF~l~~~~~~~~~~~~~~g~~~~~~~~ 512 (1257)
T KOG0430|consen 435 HAKKTEELLLGKPWEEELLEDAFGLLQSDLVPDE--PGGMPEYRKKLALGFFFKFLLKVAHKVKNGNKFITGGSLLARPL 512 (1257)
T ss_pred hhhhHHHHhhcccccHHHHHHHHHhhhhhccCCC--CCCcHHHHHHHHHHHHHHHHHHHhhhccccCCccCCCccccccc
Confidence 455555 899999999 99999998874 333366677788999
Q ss_pred CCCccccccccCCCCCCCCCCccchhhhcccccccccCCCCCCCcEEEEEEecCCCCeEeecCCchhhhcCCCEEEEEec
Q psy7003 727 SQGSEDFETKQNLWPLTKPLPKIDAITQCAGEAEYVNDLPQLSEEYFASVVLADRGPAKIQSIDSTLALAYPGVHTFVHA 806 (1520)
Q Consensus 727 s~g~q~~~~~~~~~~iGk~~~r~da~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~ahA~I~sID~s~A~a~PGV~avvt~ 806 (1520)
+++.|.|.+.+..+|||+|++++.+..|+||||.|+||||.+++.||++||.|+++||+|+|||+++|+++|||++++++
T Consensus 513 ls~~Q~~~~~q~~~pVG~pi~~~~a~~qaSGEAvY~dDip~~~n~lh~aFV~St~p~A~I~sID~seAl~~~GVv~~~~a 592 (1257)
T KOG0430|consen 513 LSGGQQFETTQEHYPVGRPVEKLEALIQASGEATYVDDIPTPPNTLHAAFVLSTKPHAKILSIDASEALKLPGVVAFFSA 592 (1257)
T ss_pred cccceeecCCCCCCcCcchhhhhhhhhhcccceEEecCCCCCCCeeEEEEEEcccCCcEEeeecchhhcCCCceEEEEec
Confidence 99999999988899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCcccccccCCCCcccccccccCCCCCCCCCCCCCCCCcccccccccCeeeecCCEEEEEEECCHH
Q psy7003 807 KDIPGKNLAIPAAWPGQIFEDEKAYPGVHTFVHAKDIPGKNLAIPAAWPGQIFEDEKLFAENEVEFAGQIIGAIIADNFK 886 (1520)
Q Consensus 807 ~Dipg~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~~~~a~~~V~y~GqpVaaVvAet~~ 886 (1520)
+|||+.|.. ... +. ..+.|+++||+++|+++||||++|||+|.+
T Consensus 593 kDiPg~n~~-~i~---~~--------------------------------~~~~de~lFA~~~v~~~GQ~ig~ivAdt~~ 636 (1257)
T KOG0430|consen 593 KDIPGNNMK-NIG---NM--------------------------------FFPEDEELFATDVVTCVGQPIGVIVADTHE 636 (1257)
T ss_pred ccCCCCCcc-ccc---cc--------------------------------cCCCccceeecceeEEcCcEEEEEEeCCHH
Confidence 999998841 110 00 115789999999999999999999999999
Q ss_pred HHHHHcccceEEEeeCCCCCCCHHHHhhcCCccchhhhhccCCCccccCCCCCchhhHHHHhhcccceEEEEEEEECccc
Q psy7003 887 SAYEAAKMVKVVYSDVKTPKLDIKQIVQDGDKARIVEMFKLEPTATKSKFSPDSNARWEILEAGKKLFKIKGAAEFGPQY 966 (1520)
Q Consensus 887 ~A~~Aa~lV~VeYe~l~~~v~di~~Al~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~vveg~~~~~~q~ 966 (1520)
+|++||++|+|+|++++++++++++|+++.+....+. +...+++...+ -++++| .+++|+++++.|+
T Consensus 637 ~A~rAA~lVkv~Y~~l~p~I~t~e~Ai~~~s~~~~~~--~~~~~~~~~~~---------~~~~~d--~i~~Ge~~mG~Qe 703 (1257)
T KOG0430|consen 637 LAKRAAKLVKVEYEELPPPILPSEDAVKDKSLSETEP--RLRKGDVGKSF---------QLEECD--KILEGELDMGGQE 703 (1257)
T ss_pred HHHHhhhceEEEeccCCCceecHHHHHhhhcccCCCc--cccccCccccc---------cccccc--eeEEEEEEeccee
Confidence 9999999999999999878999999999987543322 22333332211 135678 9999999999999
Q ss_pred cCCCCCCeeEEEEeCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCCCCCCCchHHHHHHHHHHhcCCc
Q psy7003 967 HYTMEGQTALCVPSEDGVDIYAASQWVTLVQESVAGVLGLPNNRVNVKTRRIGGGYGAKLSRSCYPAVIAAVCSNVINKP 1046 (1520)
Q Consensus 967 H~~mEp~~a~A~~~ed~l~V~~sTQ~p~~vq~~vA~~LGlp~~kVrV~~~~vGGgFG~K~~~~~~~~~~AAlaA~~~gRP 1046 (1520)
|||||||+++|+|+||.|+||+|||||..+|..||++||||.|||+|+++|+|||||||.+++..++++||++|+|+|||
T Consensus 704 HFYmEtQttl~vP~e~el~v~~STQ~~~~tQ~~VA~~Lgipa~~V~v~trRvGGGFGGK~trs~~VA~a~ALaA~Kl~RP 783 (1257)
T KOG0430|consen 704 HFYMEPQTTLVVPFEGELQVYSSTQWPDFTQSVVAHVLGLPANKVQVKTRRLGGGFGGKETRSNPVAAAAALAAYKLNRP 783 (1257)
T ss_pred EEEeccceeEEeecCCeEEEEEcCcCcHHHHHHHHHHhCCCccceEEEEEeeccccccccccccHHHHHHHHHHHHhCCC
Confidence 99999999999999889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcChHHHHhccCCCCcEEEEEeeeccCCCccccccCCCccchhhhhhhhccceeeeccccccccccCcchhhhhccc
Q psy7003 1047 VRIVMSIESMMGALGGRYPVYATYEIGTIGGNLSIKHEHPEFSSDVFLLLEVVGATITIRDTFGLEQTVSPEEYLSIDMN 1126 (1520)
Q Consensus 1047 Vrl~~sRee~m~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1126 (1520)
||++++|++||.++|+|||+..+|
T Consensus 784 vr~~l~r~~dM~itG~Rhp~~~~Y-------------------------------------------------------- 807 (1257)
T KOG0430|consen 784 VRFVLSRESDMIITGKRHPFHGKY-------------------------------------------------------- 807 (1257)
T ss_pred EEEEecchhhhhhcCCccceEEeE--------------------------------------------------------
Confidence 999999999999999999999999
Q ss_pred cceeeeeecccccccccccccceeeeCCCCcEEEEEEEEEEecCCCcccchhhhHhhcccCCCCCCCCceEEEEEEEecC
Q psy7003 1127 KKVITYITFCPLIKNSYYLRTYKCGVDKNGVIQNLSTVFNVDKGMTLNENGFLHVRFGLGQASIYDPSTFRVVANAVRTD 1206 (1520)
Q Consensus 1127 ~~~~~~~~~~~~~~~~~~~~~~k~g~d~dG~i~al~~~~~~d~Ga~~~~~~~~~~~~~~~~~~~Y~ipn~r~~~~~v~TN 1206 (1520)
|+|+++||||+|+++++|.|+|++.++|..++ +++++.+++|+++|+|+++++|+||
T Consensus 808 ----------------------kvgf~~~GkI~aL~~~~~~naG~s~d~S~~~~-~~~~~~~n~Y~~~~~r~~G~~ckTN 864 (1257)
T KOG0430|consen 808 ----------------------KVGFKSDGKILALDLEFYENAGWSKDESPSVL-RAMFHSDNVYEIGDVRFDGYVCKTN 864 (1257)
T ss_pred ----------------------EEEEccCCeEEEEehhhhhccCCCcCcchHHH-hhhhhhhheecccceeeeeeEEecC
Confidence 99999999999999999999999999998877 8888899999999999999999999
Q ss_pred CCCCcccCCCCchhHHHHHHHHHHHHHHHhCCCHHHHHHHhcCC-------------chHHHHHHHHHhccChHHHHHHH
Q psy7003 1207 KPTYGFTRSPGACEVTAFIEHVMDHIATVVNRDPTDVRIANLRN-------------EDVKKFYQQFRGSVKYKERRDAI 1273 (1520)
Q Consensus 1207 ~p~~ga~Rg~G~~q~~fa~E~~mD~iA~~lg~DP~e~R~~Nl~~-------------~~~~~~~~~~~~~~~~~~r~~~~ 1273 (1520)
.|++|||||||.||++++.|++|.++|.++|+||.|+|++|++. ..+.+||+++..+++|++|+.++
T Consensus 865 ~pSnTa~Rg~G~pQG~~i~E~iie~VA~~~g~d~eeVR~~N~y~eg~~~~~~~~~~~~~l~~~w~~~~~sS~y~~Rk~ev 944 (1257)
T KOG0430|consen 865 LPSNTAFRGPGSPQGILITENIIERIAFELGKDPEEVRKINFYVEGSLTYYHGELQHCTLPQLWPECLVSSKFEKRKSEI 944 (1257)
T ss_pred CCCcchhcCCCChhhHHHHHHHHHHHHHHhCCCHHHHhhhhhhhcccccccCCCcccCcHHHHHHHHHHhchHHHHHHHH
Confidence 99999999999999999999999999999999999999999861 35899999999999999999999
Q ss_pred HHHhhhhhhhhhhhhhhhhccCCccccccceEEEEeccCCCCcceEEEEEEcCCCeEEEEecCcccCcchHHHHHHHHHH
Q psy7003 1274 ETFNAVRVLISQYSLRHCFQNNRWRKRGISAVVTLFPLGFYDVSYAILSVFRRDATVAITTSGIEIGQGLHTKVAQACAY 1353 (1520)
Q Consensus 1274 ~~~n~~~~~~~~~~~~~~~~~~~~~krGig~~~~~~~~g~~~~~~a~v~v~~~DGsV~i~~g~~e~GQG~~T~~aQiaA~ 1353 (1520)
++||+ +|+||||||+++++.|++++..++.|.|+||+ ||||.|+|||+|||||+||||+|+||+
T Consensus 945 ~~FN~---------------~N~WrKRGi~~vp~~f~i~~~~~~~a~V~Iy~-DGSV~v~hgGiEmGQGL~TK~~Qvaa~ 1008 (1257)
T KOG0430|consen 945 EEFNK---------------ENRWKKRGLAMVPMKFGISFTGQAPALVHIYT-DGTVVVTHGGIEMGQGLNTKVAQVAAY 1008 (1257)
T ss_pred HHhhh---------------cChhhhcCceEeeeecceeccCCCceEEEEEc-CCeEEEEECcEEcccchhHHHHHHHHH
Confidence 99999 99999999999999999999988999999998 999999999999999999999999999
Q ss_pred HhCCCCCcEEEecCCCCCCCCCCCCcccccccchHHHHHHHHHHHHHHhhhhhhcC--CCHHHHHHHHhhcCceeEEEEE
Q psy7003 1354 ELGIPIEKIVLKPAQNNIFPNAANTGGSTASDNAARCILLCCQELKTRLMPYMDKG--KSWEKTISDAFERGVDLQVTKS 1431 (1520)
Q Consensus 1354 ~Lgip~e~I~v~~~dT~~~p~~~~t~gS~~t~~~g~Av~~Ac~~l~~rl~~~~~~~--~~w~~~~~~a~~~gv~l~~~~~ 1431 (1520)
.||||++.|++..++|+..||+++|+||.+|++.|.||++||+.|.+||+|++++. .+|++++++||.+.|+|+++..
T Consensus 1009 ~l~ip~~~v~v~~tsT~~v~na~~Ta~S~~Sd~~g~AV~~~C~~l~~RL~Pv~~k~~~~tw~~~i~~AY~q~V~LsAs~~ 1088 (1257)
T KOG0430|consen 1009 ALGIPLSSVFVSETSTDKVPNASPTAASVSSDMYGAAVLDACETINARLEPVKSKHNFNTWEELIQAAYGQSINLSASDW 1088 (1257)
T ss_pred HhCCcccceEEeecccccccCCCccccccccccccHHHHHHHHHHHHhhhhhhhhcCCccHHHHHHHHhhCccceeeecc
Confidence 99999999999999999999999999999999999999999999999999999884 8999999999999999999988
Q ss_pred eeccCCCCCCCccccceEEEEEEEEECCCCcEEEEEEEEEEecCcccChHHHhHHhHhHHHHHHHHHHccceeeeCCCce
Q psy7003 1432 VSSQQTPDLLPMYTIPTAAATEVEVDLLTGQHQILRVDILEDTGQSINPAIDIGQIQGAFIMGIGLWTFEHQIHDKRTGA 1511 (1520)
Q Consensus 1432 ~~~~~~~~~~~~~~~~ga~~aEVEVD~~TG~v~V~r~~~~~D~G~~INP~~~~GQIeGg~vqGiG~aL~Ee~~~d~~~G~ 1511 (1520)
|+ ..++++.|++||++++|||||++||+++|+|+||++|||.++||++|+|||||||+||+|++++||++||++ |.
T Consensus 1089 ~~---~~g~~~~Y~~yG~a~sEVEID~LTG~~~ilRtDIv~D~G~SLNPaIDIGQIEGAFvQGlG~~t~Eel~~~~~-G~ 1164 (1257)
T KOG0430|consen 1089 YK---PEGDMFPYLTYGAAASEVEIDTLTGDTEVLRVDILYDCGESLNPAIDIGQIEGAFVQGLGLVTLEELIYDPE-GS 1164 (1257)
T ss_pred cc---CCCCcccceeccceeEEEEEEEecCcceEEEEEEeeecccccCcccccchhhhHHHhchhhhhhhhheeCCC-ce
Confidence 84 347889999999999999999999999999999999999999999999999999999999999999999975 99
Q ss_pred eecCCCCC
Q psy7003 1512 LLTNRTWV 1519 (1520)
Q Consensus 1512 llt~~~w~ 1519 (1520)
++|++||+
T Consensus 1165 l~t~gt~~ 1172 (1257)
T KOG0430|consen 1165 LLTNGTWT 1172 (1257)
T ss_pred EeecCCCc
Confidence 99999997
No 2
>TIGR02969 mam_aldehyde_ox aldehyde oxidase. Members of this family are mammalian aldehyde oxidase (EC 1.2.3.1) isozymes, closely related to xanthine dehydrogenase/oxidase.
Probab=100.00 E-value=4.8e-214 Score=2095.08 Aligned_cols=1079 Identities=29% Similarity=0.440 Sum_probs=936.2
Q ss_pred EEEEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEECCccCCCCcccccccccchhhHHhcCCc
Q psy7003 21 TVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTSSHPVTGVDSTYSVNACLVLVHMCGGW 100 (1520)
Q Consensus 21 ~~~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~~~~~~~~~~~~~~~v~scl~~~~~~~g~ 100 (1520)
.|+|+|||+.+.+. +++|++|||||||+++||+|||.||++|+||||||+|+++|+.+|++.+++|||||+|+++++|+
T Consensus 2 ~~~~~~Ng~~~~~~-~~~~~~~ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~ 80 (1330)
T TIGR02969 2 ELLFYVNGRKVVEK-NVDPETMLLPYLRKKLRLTGTKYGCGGGGCGACTVMISRYNPSTKSIRHHPVNACLTPICSLYGA 80 (1330)
T ss_pred cEEEEECCEEEEec-cCCCCCcHHHHHHhhcCCCCCCCCcCCCCCCCcEEEECCccccccccCCcEEehhHHHHHHhCCC
Confidence 38899999998653 89999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCCCCCCCCHHHHHHHHhCCCCCCCCchhHHHHHhhhhccccccccCCcchhhHHhhhhhccCCCcchhHHHH
Q psy7003 101 AITTVEGLGSKKKGYHNVQTRLATMNGSQCGYCSPGMVMAMYSRHRLTASTMCGHNFTKTLLLQMYCIFLPPFSLEVLFV 180 (1520)
Q Consensus 101 ~i~T~eg~~~~~~~~h~vq~~~~~~~~~qcg~ctpg~vm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (1520)
+|+|||||++.++.+||||++|+++|++|||||||||||+||+
T Consensus 81 ~v~TvEgl~~~~~~l~pvq~a~~~~~~~QCGfCtpG~vm~~~~------------------------------------- 123 (1330)
T TIGR02969 81 AVTTVEGIGSTRTRLHPVQERIAKCHGTQCGFCTPGMVMSMYA------------------------------------- 123 (1330)
T ss_pred EEEecCCcCCCCCCCCHHHHHHHHcCCCcCCCCchHHHHHHHH-------------------------------------
Confidence 9999999997556799999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCCHHHHHHHhcCCccCCCCcHHHHHHHHHhhhhcCcccccccccccccccccccccccccccc
Q psy7003 181 ILLIFVIVSFLEGKKYKVTKSEVEGALGGNICRCTGFRPILDAFQSFSCDASDSVQRKCADIEVRGKRDFISHESLGTQL 260 (1520)
Q Consensus 181 ~~~~~~~~~~l~~~~~~~~~~~i~~~~~gn~crctgy~~i~~a~~~~~~~~~~~~~~~~~d~e~~~~~~~~~~~~~~~~~ 260 (1520)
||++++ .||++||+++|+|||||||||+||++|+++++.+.. | ++++ ++
T Consensus 124 ---------ll~~~~-~p~~~~i~~~l~gnlCRCtgY~~i~~a~~~~~~~~~------~-~~~~-----------~~--- 172 (1330)
T TIGR02969 124 ---------LLRNHP-EPTLDQLTDALGGNLCRCTGYRPIIDACKTFCKTSG------C-CQSK-----------EN--- 172 (1330)
T ss_pred ---------HHHcCC-CCCHHHHHHHhcCCcccCCCCHHHHHHHHHHhhccC------C-chhc-----------cc---
Confidence 888887 799999999999999999999999999999986621 3 3443 10
Q ss_pred cccccccchhhhhhhhhcccccccccccccccCCCcceEEEECCEEEEecccCCCCcchhHHHHhhhcccCcccccc-CC
Q psy7003 261 LDWAFDTLVFSVLEFRLATLIIVPILLPRLFSDTSSTVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCR-EG 339 (1520)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~f~~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~-~g 339 (1520)
+.+|. +.
T Consensus 173 ------------------------------------------------------------------------~~~c~~~~ 180 (1330)
T TIGR02969 173 ------------------------------------------------------------------------GVCCLDQG 180 (1330)
T ss_pred ------------------------------------------------------------------------cCcccccc
Confidence 01232 00
Q ss_pred CccceeeeeccCCCcccccccccccccccccccCccccccCCccchhhhhcccCCCCcccccccccccccccccccccCC
Q psy7003 340 GCGVCTVTVTSSHPVTGVDSTYSVNACGDRCFTRNICRCTGFRPILDAFQSFSCDASDSVQRKCADIEVRGKRDFISHEG 419 (1520)
Q Consensus 340 ~cGactV~v~~~hpvq~~~~~~~~~~Cg~~C~~gNLCRCTgyrpIlda~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (1520)
. . +.|.|.+-.+..
T Consensus 181 ~-------------------------------~-~~~~~~~~~~~~---------------------------------- 194 (1330)
T TIGR02969 181 I-------------------------------N-GLPEFEEGDETS---------------------------------- 194 (1330)
T ss_pred c-------------------------------c-cccccccccccc----------------------------------
Confidence 0 0 001110000000
Q ss_pred CCCCCCChhhhcccccccccCCCCCCccccccccCCC-Cccc-eeecCCCCCCcccccccccccccccccccccccCCCC
Q psy7003 420 LPEPEYDPTYRKNLAVSLFYKSHINPSIHNRTVMGRG-DVRS-LFFGSSTLGEVPTRYKLDLMGSCKLKTKLDQSEDSND 497 (1520)
Q Consensus 420 ~~~~~~~~~~~~~l~~~~~y~~s~epi~~~~l~~~~~-~~~~-l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 497 (1520)
...+. ...+.+|++.+++|||++|+..+. .... +.+.
T Consensus 195 --~~~~~------~~~~~~~~~~~~~~fp~~l~~~~~~~~~~~~~~~--------------------------------- 233 (1330)
T TIGR02969 195 --PELFS------EEEFLPLDPTQELIFPPELMRMAEKQPQRTRVFY--------------------------------- 233 (1330)
T ss_pred --ccccc------hhcccCCCccccccCChhHhhcccccccceeeec---------------------------------
Confidence 00000 022445899999999999875310 0111 2222
Q ss_pred chhhhhhhccccccccCccEEEEcCCHHHHHHHHhcCCCCCCcEEEEecchhhhccCCCC--CCeeeeCCCcccccceEE
Q psy7003 498 LDTCLIELALTPVNVNVEGIWYIVTEVREIFEIFDGLEANQTYMLVGGNTGYGVYRPRVP--VDVYIQIRDIKELRQIFT 575 (1520)
Q Consensus 498 ~~~~~~~~a~~~~~i~~~~~~~rPtSLeEal~ll~~~p~~~~a~lVAGGTdLgv~~k~~~--~~~lIdIs~I~EL~~I~~ 575 (1520)
+++.+||+|+||+|++++|++++ ++++|||||||+++++.+. .+.+|||++|+||+.|+.
T Consensus 234 ---------------~~~~~~~~P~tl~ea~~ll~~~~---~a~lvAGGTdl~~~~k~~~~~~~~lIdi~~I~EL~~i~~ 295 (1330)
T TIGR02969 234 ---------------SERMMWISPVTLKELLEAKFKYP---QAPVVMGNTSVGPEVKFKGVFHPVIISPDRIEELSVVNH 295 (1330)
T ss_pred ---------------CCCceEECCCCHHHHHHHHHhCC---CCEEEecCcchHHHhhhccCCCCeEEECCCChhhhcEEE
Confidence 12468999999999999999998 8999999999999876543 378999999999999999
Q ss_pred eCCeEEEccccCHHHHHHhhhhccC--CchhhhhHHHHHHHHHhhcchhHhccc---ccCCCCCCCCCcc-----CCcEE
Q psy7003 576 RNGYVLMGSATTLTEAMDYFDRTSK--TDANFEYMRIMKDHLEQVAHYAVRNFA---LGLSTTEVSPSLW-----SGARM 645 (1520)
Q Consensus 576 ~~~~L~IGA~vTlsel~e~L~~~~~--~~~~~~~~~~La~al~~IAs~qIRN~A---GNL~~asp~SDL~-----lgA~V 645 (1520)
++++|+|||++|++++++.|...+. .+...++++.|.+++++||++||||+| |||++++|++|++ +||+|
T Consensus 296 ~~~~l~IGA~vT~~el~~~l~~~i~~~p~~~~~~~p~L~~a~~~ias~qIRN~gTlGGNi~~asP~sD~~p~LlAl~A~v 375 (1330)
T TIGR02969 296 TGDGLTLGAGLSLAQVKDILADVVQKLPEETTQTYRALLKHLGTLAGSQIRNMASLGGHIISRHLDSDLNPLLAVGNCTL 375 (1330)
T ss_pred cCCEEEEeccccHHHHHHHHHHhhhcCchhhhHHHHHHHHHHHHhCChhhcccccchhhcccCCCchhHHHHHHHcCcEE
Confidence 9999999999999999997765532 123457899999999999999999999 9999999999999 99999
Q ss_pred EEEecCceee--ccccc----------cCce-eeeeeCCCCcc----------------------------------ccc
Q psy7003 646 IQIERAMSQG--SEDFE----------TKQN-LWPLTKPLPKI----------------------------------DAI 678 (1520)
Q Consensus 646 ~I~s~~g~R~--l~dFf----------~~EI-tsI~IP~~~~~----------------------------------~~a 678 (1520)
+|.+.+|.|. +++|| ++|| ++|.||..... +++
T Consensus 376 ~l~s~~g~R~vpl~dff~~~~~~t~L~~~Eil~~I~iP~~~~~~~~~~~K~~~R~~~dia~V~~A~~v~l~~~~~~i~~a 455 (1330)
T TIGR02969 376 NLLSKEGKRQIPLSEQFLSKCPDADLKPQEILVSVNIPYSRKWEFVSAFRQAQRQQNALAIVNSGMRVFFGEGDGIIREL 455 (1330)
T ss_pred EEecCCceEEEehHHhhhcccccccCCCCceEEEEEecCCCCccceeEEEEcCCccccHHHhhheEEEEEEcCCCEEeEE
Confidence 9999999888 77777 5799 99999975331 247
Q ss_pred ccccc-----------------------------------cccccCCCCCCcHHHHH--------HHHHhhcCCCc----
Q psy7003 679 TQCAG-----------------------------------EAEYVNDLPQLSEEYFA--------SVVLAERGPAK---- 711 (1520)
Q Consensus 679 rIa~G-----------------------------------El~p~~d~P~gS~EYRr--------KF~L~v~~~~~---- 711 (1520)
||+|| ++.|+.+.+++|++||| |||++++.++.
T Consensus 456 ria~Ggvap~p~ra~~~E~~L~Gk~~~~~~~~~A~~~l~~~~~p~~~d~r~sa~YRr~la~~ll~kf~~~~~~~~~~~~~ 535 (1330)
T TIGR02969 456 SISYGGVGPTTICAKNSCQKLIGRPWNEEMLDTACRLILDEVSLAGSAPGGKVEFKRTLIISFLFKFYLEVSQILKRMDP 535 (1330)
T ss_pred EEEEEcCcCceecHHHHHHHhcCCCCCHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhhccccc
Confidence 89999 56677777899999999 89999886541
Q ss_pred -----cccc-cchhhhhcccCCCCcccccccc----CCCCCCCCCCccchhhhcccccccccCCCCCCCcEEEEEEecCC
Q psy7003 712 -----IQSI-DSTLALVSCAMSQGSEDFETKQ----NLWPLTKPLPKIDAITQCAGEAEYVNDLPQLSEEYFASVVLADR 781 (1520)
Q Consensus 712 -----i~~~-~s~~~~~~~~~s~g~q~~~~~~----~~~~iGk~~~r~da~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~ 781 (1520)
+++. .|+...++||+|+|.|.|+... ..|+|||+++|+|+..||||+++|++|++.+|||||++|||||+
T Consensus 536 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vGk~v~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~ 615 (1330)
T TIGR02969 536 GHYPSLADKYESALEDLHSKHHWSTLKHQNVDSMQLPQDPIGHPIMHLSGVKHATGEAIYCDDMPAVDQELFLTFVTSSR 615 (1330)
T ss_pred cccccCChhhccccccccCCCCccccceecccccccccCcCCCCCcChhhHhhccccccccCCCCCCCCCEEEEEEecCC
Confidence 2333 7888899999999999998522 23999999999999999999999999994379999999999999
Q ss_pred CCeEeecCCchhhhcCCCEEEEEeccCCCCCCCCCCCCCCCcccccccCCCCcccccccccCCCCCCCCCCCCCCCCccc
Q psy7003 782 GPAKIQSIDSTLALAYPGVHTFVHAKDIPGKNLAIPAAWPGQIFEDEKAYPGVHTFVHAKDIPGKNLAIPAAWPGQIFED 861 (1520)
Q Consensus 782 ahA~I~sID~s~A~a~PGV~avvt~~Dipg~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~d 861 (1520)
+||+|++||+++|++||||++|+|++|+|+.|.+ .+
T Consensus 616 ahArI~sID~s~A~~~pGV~~V~t~~Dvp~~~~~--------------------------------------------~~ 651 (1330)
T TIGR02969 616 AHAKIVSIDLSEALSLPGVVDIITAEHLQDANTF--------------------------------------------GT 651 (1330)
T ss_pred CceEEEeeeHHHHhcCCCeEEEEeHHHCCCCCCC--------------------------------------------CC
Confidence 9999999999999999999999999999854321 25
Q ss_pred ccccccCeeeecCCEEEEEEECCHHHHHHHcccceEEEeeCCCCCCCHHHHhhcCCccchhhhhccCCCccccCCCCCch
Q psy7003 862 EKLFAENEVEFAGQIIGAIIADNFKSAYEAAKMVKVVYSDVKTPKLDIKQIVQDGDKARIVEMFKLEPTATKSKFSPDSN 941 (1520)
Q Consensus 862 ~~~~a~~~V~y~GqpVaaVvAet~~~A~~Aa~lV~VeYe~l~~~v~di~~Al~~~~~~~i~~~~~~~~g~~~~~~~~~~~ 941 (1520)
+++|++++|+|+|||||+|||+|+++|++|+++|+|+||++|++++|+++|+++++. .........||+
T Consensus 652 ~~~la~~~Vr~~Gqpva~VvAet~~~A~~Aa~~V~VeYe~l~~~v~d~~~Al~~~a~--~~~~~~~~~Gdv--------- 720 (1330)
T TIGR02969 652 EKLLATDKVHCVGQLVCAVIADSEVQAKQAAKHVKIVYRDLEPLILTIEEAIQHKSF--FEPERKLEYGNV--------- 720 (1330)
T ss_pred eeecCCCeEEEcCCeEEEEEECCHHHHHHHhcCCEEEEecCCCCcCCHHHHhcCCCE--ecccccccCCch---------
Confidence 789999999999999999999999999999999999999997678999999988752 111122234444
Q ss_pred hhHHHHhhcccceEEEEEEEECccccCCCCCCeeEEEEeC--CeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccC
Q psy7003 942 ARWEILEAGKKLFKIKGAAEFGPQYHYTMEGQTALCVPSE--DGVDIYAASQWVTLVQESVAGVLGLPNNRVNVKTRRIG 1019 (1520)
Q Consensus 942 ~~~~~~~~a~~~~vveg~~~~~~q~H~~mEp~~a~A~~~e--d~l~V~~sTQ~p~~vq~~vA~~LGlp~~kVrV~~~~vG 1019 (1520)
+++|++++ ++||++|++++|+|+||||++|+|+|++ ++|+||+|||+|+.+|..+|++||||.+||||+++++|
T Consensus 721 --~~af~~a~--~vve~~y~~~~~~H~~mEp~~~~A~~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vG 796 (1330)
T TIGR02969 721 --DEAFKVVD--QILEGEIHMGGQEHFYMETQSMLVVPKGEDQEMDVYVSTQFPKYIQDIVAATLKLPVNKVMCHVRRVG 796 (1330)
T ss_pred --hhhhccCC--EEEEEEEEECCEeecccCCCEEEEEEeCCCCeEEEEECCcCHHHHHHHHHHHhCCCHHHeEEEeCCcc
Confidence 34689999 9999999999999999999999999983 57999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCchHHHHHHHHHHhcCCcEEEEcChHHHHhccCCCCcEEEEEeeeccCCCccccccCCCccchhhhhhhhc
Q psy7003 1020 GGYGAKLSRSCYPAVIAAVCSNVINKPVRIVMSIESMMGALGGRYPVYATYEIGTIGGNLSIKHEHPEFSSDVFLLLEVV 1099 (1520)
Q Consensus 1020 GgFG~K~~~~~~~~~~AAlaA~~~gRPVrl~~sRee~m~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 1099 (1520)
||||+|.......++.||++|+++||||||+|||+|+|..+++||++.++|
T Consensus 797 GgFG~K~~~~~~~~~~aA~aA~~~gRPVk~~~sR~e~~~~~~~R~~~~~~~----------------------------- 847 (1330)
T TIGR02969 797 GAFGGKVGKTSIMAAITAFAANKHGRAVRCTLERGEDMLITGGRHPYLGKY----------------------------- 847 (1330)
T ss_pred cCcccccccccHHHHHHHHHHHHhCCCEEEEecHHHHhhhcCCcCceEEEE-----------------------------
Confidence 999999987655568899999999999999999999999999999999988
Q ss_pred cceeeeccccccccccCcchhhhhccccceeeeeecccccccccccccceeeeCCCCcEEEEEEEEEEecCCCcccchhh
Q psy7003 1100 GATITIRDTFGLEQTVSPEEYLSIDMNKKVITYITFCPLIKNSYYLRTYKCGVDKNGVIQNLSTVFNVDKGMTLNENGFL 1179 (1520)
Q Consensus 1100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~g~d~dG~i~al~~~~~~d~Ga~~~~~~~~ 1179 (1520)
|+|+|+||+|++++++++.|+|+|.+.+..+
T Consensus 848 -------------------------------------------------k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~v 878 (1330)
T TIGR02969 848 -------------------------------------------------KAGFMNDGRIVALDVEHYSNGGSSLDESLWV 878 (1330)
T ss_pred -------------------------------------------------EEEECCCCCEEEEEEEEEEecccccCcchHH
Confidence 9999999999999999999999999877656
Q ss_pred hHhhcccCCCCCCCCceEEEEEEEecCCCCCcccCCCCchhHHHHHHHHHHHHHHHhCCCHHHHHHHhcCC---------
Q psy7003 1180 HVRFGLGQASIYDPSTFRVVANAVRTDKPTYGFTRSPGACEVTAFIEHVMDHIATVVNRDPTDVRIANLRN--------- 1250 (1520)
Q Consensus 1180 ~~~~~~~~~~~Y~ipn~r~~~~~v~TN~p~~ga~Rg~G~~q~~fa~E~~mD~iA~~lg~DP~e~R~~Nl~~--------- 1250 (1520)
+.+...+..++|+|||++++++.|+||+|++|||||||.+|++|++|++||++|++|||||+|||++|++.
T Consensus 879 ~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~~a~RG~G~~q~~fa~E~~mD~lA~~lg~DP~e~R~~N~~~~gd~~p~~~ 958 (1330)
T TIGR02969 879 IEMGLLKMDNAYKFPNLRCRGWACRTNLPSNTAFRGFGFPQAGLITEACITEVAAKCGLSPEKVRTINMYKEIDQTPYKQ 958 (1330)
T ss_pred HHHHHHhcCCCccCCcEEEEEEEEECCCCCCCccCCCchHHHHHHHHHHHHHHHHHHCcCHHHHHHHhCCCCcccCCCCc
Confidence 55555568899999999999999999999999999999999999999999999999999999999999983
Q ss_pred ----chHHHHHHHHHhccChHHHHHHHHHHhhhhhhhhhhhhhhhhccCCccccccceEEEEeccCCC----CcceEEEE
Q psy7003 1251 ----EDVKKFYQQFRGSVKYKERRDAIETFNAVRVLISQYSLRHCFQNNRWRKRGISAVVTLFPLGFY----DVSYAILS 1322 (1520)
Q Consensus 1251 ----~~~~~~~~~~~~~~~~~~r~~~~~~~n~~~~~~~~~~~~~~~~~~~~~krGig~~~~~~~~g~~----~~~~a~v~ 1322 (1520)
.++.++|+++++.++|++|++.++.||+ +|+|+|||+|++++.|+.+++ +++.|.|+
T Consensus 959 ~~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~---------------~~~~~~rGiG~a~~~~~~~~~~~~~~~~~a~v~ 1023 (1330)
T TIGR02969 959 EINAKNLFQCWRECMAKSSYSERKVAVEKFNA---------------ENYWKKRGLAVIPLKFPVGLGSVAMGQAAALVH 1023 (1330)
T ss_pred ccCCCcHHHHHHHHHHhcCHHHHHHHHHHHhc---------------cCCCeEEEEEEEEEEeccccccCCCCCccEEEE
Confidence 2589999999999999999988888887 789999999999999987653 46889999
Q ss_pred EEcCCCeEEEEecCcccCcchHHHHHHHHHHHhCCCCCcEEEecCCCCCCCCCCCCcccccccchHHHHHHHHHHHHHHh
Q psy7003 1323 VFRRDATVAITTSGIEIGQGLHTKVAQACAYELGIPIEKIVLKPAQNNIFPNAANTGGSTASDNAARCILLCCQELKTRL 1402 (1520)
Q Consensus 1323 v~~~DGsV~i~~g~~e~GQG~~T~~aQiaA~~Lgip~e~I~v~~~dT~~~p~~~~t~gS~~t~~~g~Av~~Ac~~l~~rl 1402 (1520)
|+ .||+|+|.+|++|||||++|+++||||++||||+|+|+|..+||+.+||+++|+|||+|+++|.||++||++||+||
T Consensus 1024 i~-~DGsV~V~~G~~e~GQG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~gt~gSr~t~~~G~Av~~A~~~l~~rl 1102 (1330)
T TIGR02969 1024 IY-LDGSVLVTHGGIEMGQGVHTKMIQVVSRELKMPMSNVHLRGTSTETVPNTNASGGSVVADLNGLAVKDACQTLLKRL 1102 (1330)
T ss_pred Ec-CCceEEEEECCcCcCCChHHHHHHHHHHHhCCCHHHEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 75 69999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhc--CCCHHHHHHHHhhcCceeEEEEEeeccC-------CCCCCCccccceEEEEEEEEECCCCcEEEEEEEEEEe
Q psy7003 1403 MPYMDK--GKSWEKTISDAFERGVDLQVTKSVSSQQ-------TPDLLPMYTIPTAAATEVEVDLLTGQHQILRVDILED 1473 (1520)
Q Consensus 1403 ~~~~~~--~~~w~~~~~~a~~~gv~l~~~~~~~~~~-------~~~~~~~~~~~ga~~aEVEVD~~TG~v~V~r~~~~~D 1473 (1520)
.+++++ ..+|.+++..++..+++|.+.++|.... ..+.++.|++||++++|||||++||+++|+|+++++|
T Consensus 1103 ~~~aa~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ga~~aeVEVD~~TG~v~vlr~~~v~D 1182 (1330)
T TIGR02969 1103 EPIISKNPQGTWKDWAQTAFDQSISLSAVGYFRGYESNINWEKGEGHPFEYFVYGAACSEVEIDCLTGDHKNIRTDIVMD 1182 (1330)
T ss_pred HHHHhhCCCCCHHHHHHhhccCCCceEEEEEecCCcccccccCcCCCCccccceeeEEEEEEEecCCCCEEEEEEEEEEe
Confidence 999765 5789999876776678888888773210 0012345789999999999999999999999999999
Q ss_pred cCcccChHHHhHHhHhHHHHHHHHHHccceeeeCCCceeecCCCCC
Q psy7003 1474 TGQSINPAIDIGQIQGAFIMGIGLWTFEHQIHDKRTGALLTNRTWV 1519 (1520)
Q Consensus 1474 ~G~~INP~~~~GQIeGg~vqGiG~aL~Ee~~~d~~~G~llt~~~w~ 1519 (1520)
||++|||.+++|||||||+||||++|+||++||+ +|+++|++.|+
T Consensus 1183 ~G~~INP~~~~GQieGg~vqGiG~al~Ee~~yd~-~G~~lt~~~~d 1227 (1330)
T TIGR02969 1183 VGHSINPALDIGQVEGAFIQGMGLYTIEELSYSP-QGILYSRGPNQ 1227 (1330)
T ss_pred CCcccCHHHHhHhHHHHHHHHHHHHHcceeEECC-CCCCCCCCccc
Confidence 9999999999999999999999999999999995 69999999985
No 3
>PLN00192 aldehyde oxidase
Probab=100.00 E-value=4.5e-212 Score=2077.83 Aligned_cols=1065 Identities=30% Similarity=0.490 Sum_probs=918.9
Q ss_pred eEEEEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEECCccCCCCcccccccccchhhHHhcCC
Q psy7003 20 STVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTSSHPVTGVDSTYSVNACLVLVHMCGG 99 (1520)
Q Consensus 20 ~~~~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~~~~~~~~~~~~~~~v~scl~~~~~~~g 99 (1520)
+.|+|+|||++++++ +++|++|||+|||++++|||||.||+||+||||||+|+.+||.+|++.+++|||||+|+++++|
T Consensus 4 ~~i~~~vNg~~~~~~-~~~p~~~Ll~~LR~~~~ltgtK~gC~~G~CGaCtV~v~~~~~~~~~~~~~~v~sCl~~~~~~~g 82 (1344)
T PLN00192 4 MSLVFAVNGERFELS-SVDPSTTLLEFLRTQTPFKSVKLGCGEGGCGACVVLLSKYDPVLDQVEDFTVSSCLTLLCSVNG 82 (1344)
T ss_pred ceEEEEECCEEEEec-cCCCCCcHHHHHHHhhCCCCcCCCCCCCcCCCcEEEEeeccccccCcCCcEEehHHHHHHHhCC
Confidence 469999999999984 7999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEecCCCCCCCCCCHHHHHHHHhCCCCCCCCchhHHHHHhhhhccccccccCCcchhhHHhhhhhccCCCcchhHHH
Q psy7003 100 WAITTVEGLGSKKKGYHNVQTRLATMNGSQCGYCSPGMVMAMYSRHRLTASTMCGHNFTKTLLLQMYCIFLPPFSLEVLF 179 (1520)
Q Consensus 100 ~~i~T~eg~~~~~~~~h~vq~~~~~~~~~qcg~ctpg~vm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (1520)
++|+|||||+++++++||||++|+++||+|||||||||||+||+
T Consensus 83 ~~i~TvEgl~~~~~~lhpvq~a~~~~~~~QCGfCtpG~vms~~~------------------------------------ 126 (1344)
T PLN00192 83 CSITTSEGLGNSKDGFHPIHKRFAGFHASQCGFCTPGMCISLFS------------------------------------ 126 (1344)
T ss_pred CEEEeecCcCCCCCCCCHHHHHHHHcCCCccCCCChHHHHHHHH------------------------------------
Confidence 99999999997667899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcC-----CC------CCCHHHHHHHhcCCccCCCCcHHHHHHHHHhhhhcCcccccccccccccccc
Q psy7003 180 VILLIFVIVSFLEGK-----KY------KVTKSEVEGALGGNICRCTGFRPILDAFQSFSCDASDSVQRKCADIEVRGKR 248 (1520)
Q Consensus 180 ~~~~~~~~~~~l~~~-----~~------~~~~~~i~~~~~gn~crctgy~~i~~a~~~~~~~~~~~~~~~~~d~e~~~~~ 248 (1520)
||+++ +. .+|++||+++|+||||||||||||++|+++|+.+. ++|+
T Consensus 127 ----------ll~~~~~~~~~~p~~~~~~~~~~~i~~~l~gnlCRCtgY~~i~~a~~~~~~~~---------~~~~---- 183 (1344)
T PLN00192 127 ----------ALVNADKTDRPEPPSGFSKLTVVEAEKAVSGNLCRCTGYRPIVDACKSFAADV---------DIED---- 183 (1344)
T ss_pred ----------HHHhcccccCCCcccccCCCCHHHHHHHhcCCceeCCCCHHHHHHHHHHHhhc---------cchh----
Confidence 66432 11 24999999999999999999999999999998653 2332
Q ss_pred cccccccccccccccccccchhhhhhhhhcccccccccccccccCCCcceEEEECCEEEEecccCCCCcchhHHHHhhhc
Q psy7003 249 DFISHESLGTQLLDWAFDTLVFSVLEFRLATLIIVPILLPRLFSDTSSTVRFTINGVVYIIGAEVPPGTRLVDFIRDYAR 328 (1520)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~f~~ng~~~~~~~~~~~~~tll~~Lr~~~~ 328 (1520)
++.
T Consensus 184 -------~~~---------------------------------------------------------------------- 186 (1344)
T PLN00192 184 -------LGL---------------------------------------------------------------------- 186 (1344)
T ss_pred -------ccc----------------------------------------------------------------------
Confidence 100
Q ss_pred ccCccccccCCCccceeeeeccCCCcccccccccccccccccccCccccccCCccchhhhhcccCCCCcccccccccccc
Q psy7003 329 LKGTKYMCREGGCGVCTVTVTSSHPVTGVDSTYSVNACGDRCFTRNICRCTGFRPILDAFQSFSCDASDSVQRKCADIEV 408 (1520)
Q Consensus 329 l~gtk~~C~~g~cGactV~v~~~hpvq~~~~~~~~~~Cg~~C~~gNLCRCTgyrpIlda~~~~~~~~~~~~~~~~~~~~~ 408 (1520)
.+|.+.+ + | ...
T Consensus 187 -----~~~~~~~-------------------------~---~----------~~~------------------------- 198 (1344)
T PLN00192 187 -----NSFWKKG-------------------------E---S----------EEA------------------------- 198 (1344)
T ss_pred -----ccccccC-------------------------C---c----------chh-------------------------
Confidence 0121100 0 0 000
Q ss_pred cccccccccCCCCCCCCChhhhcccccccccCCCCCC-ccccccccCCCCccceeecCCCCCCccccccccccccccccc
Q psy7003 409 RGKRDFISHEGLPEPEYDPTYRKNLAVSLFYKSHINP-SIHNRTVMGRGDVRSLFFGSSTLGEVPTRYKLDLMGSCKLKT 487 (1520)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~y~~s~ep-i~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 487 (1520)
....+.+|+++++| || |+|+..+.....+.+
T Consensus 199 -----------------------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~------------------------ 230 (1344)
T PLN00192 199 -----------------------KLSKLPPYNHSDHICTF-PEFLKKEIKSSLLLD------------------------ 230 (1344)
T ss_pred -----------------------hhhhcccCCCccccccC-hhhhhcccCccceec------------------------
Confidence 00124578899998 67 887642111111111
Q ss_pred ccccccCCCCchhhhhhhccccccccCccEEEEcCCHHHHHHHHhcCC-CCCCcEEEEecchhhhccCCCCCCeeeeCCC
Q psy7003 488 KLDQSEDSNDLDTCLIELALTPVNVNVEGIWYIVTEVREIFEIFDGLE-ANQTYMLVGGNTGYGVYRPRVPVDVYIQIRD 566 (1520)
Q Consensus 488 ~l~~~~~~~~~~~~~~~~a~~~~~i~~~~~~~rPtSLeEal~ll~~~p-~~~~a~lVAGGTdLgv~~k~~~~~~lIdIs~ 566 (1520)
.++.+||+|+||+|++++|++++ ...++++||||||+++++....++++|||++
T Consensus 231 -------------------------~~~~~~~~P~sl~ea~~ll~~~~~~~~~a~lvAGgTdl~~~k~~~~p~~lIdi~~ 285 (1344)
T PLN00192 231 -------------------------SSRYRWYTPVSVEELQSLLESNNFDGVSVKLVVGNTGTGYYKDEELYDKYIDIRH 285 (1344)
T ss_pred -------------------------CCCceEECcCCHHHHHHHHHhCCCCCCCeEEEEeCCcceeeeccCCCCeEEEcCC
Confidence 13568999999999999999883 1126999999999998755445589999999
Q ss_pred cccccceEEeCCeEEEccccCHHHHHHhhhhccCCchhhhhHHHHHHHHHhhcchhHhccc---ccCCCCC---CCCCcc
Q psy7003 567 IKELRQIFTRNGYVLMGSATTLTEAMDYFDRTSKTDANFEYMRIMKDHLEQVAHYAVRNFA---LGLSTTE---VSPSLW 640 (1520)
Q Consensus 567 I~EL~~I~~~~~~L~IGA~vTlsel~e~L~~~~~~~~~~~~~~~La~al~~IAs~qIRN~A---GNL~~as---p~SDL~ 640 (1520)
|+||+.|+.++++|+|||++||+++++.++.... +. .+++.|.+++++||++||||+| |||++++ |+||++
T Consensus 286 I~EL~~I~~~~~~l~IGA~vTl~el~~~l~~~~~-~~--~~~p~L~~~~~~vAs~qIRN~aTlGGNI~~Asp~~p~sD~~ 362 (1344)
T PLN00192 286 IPELSMIRRDEKGIEIGAVVTISKAIEALREESK-SE--YVFKKIADHMEKIASRFVRNTGSIGGNLVMAQRKQFPSDIA 362 (1344)
T ss_pred ChhhhcEEecCCEEEEeecCcHHHHHHHHHhhcc-cc--chHHHHHHHHHHhcChhhccceechhhhcccCCCCCchhHH
Confidence 9999999999999999999999999987654311 11 1689999999999999999999 9999996 579998
Q ss_pred -----CCcEEEEEecCceee--ccccc------cCce-eeeeeCCCC-----c-c-------------------------
Q psy7003 641 -----SGARMIQIERAMSQG--SEDFE------TKQN-LWPLTKPLP-----K-I------------------------- 675 (1520)
Q Consensus 641 -----lgA~V~I~s~~g~R~--l~dFf------~~EI-tsI~IP~~~-----~-~------------------------- 675 (1520)
+||+|+|.+.+|.|. +++|| ++|| ++|.||.+. . .
T Consensus 363 p~LlAl~A~v~l~s~~g~R~vpl~dFf~~~~l~~~Eil~~I~iP~~~~~~~~~~~~~f~~yk~~~Rr~~~diA~V~aA~~ 442 (1344)
T PLN00192 363 TILLAAGSTVNIQNASKREKLTLEEFLERPPLDSKSLLLSVEIPSWTSSSGSDTKLLFETYRAAPRPLGNALPYLNAAFL 442 (1344)
T ss_pred HHHHHhCcEEEEEeCCceEEEeHHHHhccCccCCcceEEEEEccCCccccccCcccceeeeeecccccccchhhheeeEE
Confidence 999999999999888 89999 6889 999999543 1 0
Q ss_pred ---c-----------ccccccc------------------------------------cccccCCCCCCcHHHHH-----
Q psy7003 676 ---D-----------AITQCAG------------------------------------EAEYVNDLPQLSEEYFA----- 700 (1520)
Q Consensus 676 ---~-----------~arIa~G------------------------------------El~p~~d~P~gS~EYRr----- 700 (1520)
+ ++||+|| ++.|.+ +++|++|||
T Consensus 443 v~~~~~~~~~~~~i~~aria~Ggvap~~P~ra~~~E~~L~Gk~~~~~~l~~A~~~l~~~~~p~~--~~~s~eYRr~la~~ 520 (1344)
T PLN00192 443 AEVSQDASSGGIVVNDCRLAFGAYGTKHAIRARKVEEFLTGKVLSDSVLYEAVRLLKGIVVPED--GTSHPEYRSSLAVG 520 (1344)
T ss_pred EEEEecccCCCCeEeEEEEEEecCCCCceecHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCCCC--CCCCHHHHHHHHHH
Confidence 2 3578888 344544 467999999
Q ss_pred ---HHHHhhcCCC--ccc------------cccchhhhhcccCCCCccccccccCCCCCCCCCCccchhhhccccccccc
Q psy7003 701 ---SVVLAERGPA--KIQ------------SIDSTLALVSCAMSQGSEDFETKQNLWPLTKPLPKIDAITQCAGEAEYVN 763 (1520)
Q Consensus 701 ---KF~L~v~~~~--~i~------------~~~s~~~~~~~~~s~g~q~~~~~~~~~~iGk~~~r~da~~kvtG~a~Y~~ 763 (1520)
||++.++.++ .++ +..|+...++||+|+|.|.|++.+..|+|||+++|+|+..|+||+|+|++
T Consensus 521 l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~vG~~~~r~d~~~kvtG~a~Y~~ 600 (1344)
T PLN00192 521 FLFDFLSPLIESNAKSSNGWLDGGSNTKQNPDQHDDVKKPTLLLSSKQQVEENNEYHPVGEPIKKVGAALQASGEAVYVD 600 (1344)
T ss_pred HHHHHHHHHHhhccccccccccccccccccccccccccccCCCCCcceeeecccccCcCCCCCcChhhHhhcccceeccc
Confidence 8898887443 111 22678889999999999999988888999999999999999999999999
Q ss_pred CCCCCCCcEEEEEEecCCCCeEeecCCchhhhcCCCEEEEEeccCCC-CCCCCCCCCCCCcccccccCCCCccccccccc
Q psy7003 764 DLPQLSEEYFASVVLADRGPAKIQSIDSTLALAYPGVHTFVHAKDIP-GKNLAIPAAWPGQIFEDEKAYPGVHTFVHAKD 842 (1520)
Q Consensus 764 Di~~~pgmL~a~~vrSp~ahA~I~sID~s~A~a~PGV~avvt~~Dip-g~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 842 (1520)
|++.+|||||++|||||++||+|++||+++|+++|||++|+|++|+| +.|.+..
T Consensus 601 Di~~~pgmL~a~~vrSp~ahArI~sID~s~A~~~pGV~aV~t~~Dip~~~~~~g~------------------------- 655 (1344)
T PLN00192 601 DIPSPKNCLYGAFIYSTKPLARVKGIKFKSNLVPQGVLAVITFKDIPKGGQNIGS------------------------- 655 (1344)
T ss_pred ccCCCCCCEEEEEEecCCCceEEEEEEhHHhhcCCCcEEEEchHHcCcccccCCC-------------------------
Confidence 99547999999999999999999999999999999999999999998 2222210
Q ss_pred CCCCCCCCCCCCCCCCcccccccccCeeeecCCEEEEEEECCHHHHHHHcccceEEEee--C-CCCCCCHHHHhhcCCcc
Q psy7003 843 IPGKNLAIPAAWPGQIFEDEKLFAENEVEFAGQIIGAIIADNFKSAYEAAKMVKVVYSD--V-KTPKLDIKQIVQDGDKA 919 (1520)
Q Consensus 843 ~~~~~~~~~~~~~g~~~~d~~~~a~~~V~y~GqpVaaVvAet~~~A~~Aa~lV~VeYe~--l-~~~v~di~~Al~~~~~~ 919 (1520)
.....|+|+||+++|+|+|||||+|||+|+++|++|+++|+|+||+ + | +++|+++|++++++.
T Consensus 656 -------------~~~~~~~~~la~~~Vr~~Gq~Va~VvA~t~~~A~~Aa~~V~VeYe~~~l~p-~v~~i~~Al~~~s~~ 721 (1344)
T PLN00192 656 -------------KTIFGPEPLFADEVTRCAGQRIALVVADTQKHADMAANLAVVEYDTENLEP-PILTVEDAVKRSSLF 721 (1344)
T ss_pred -------------CCCCCCceeccCCEEEEcCCeEEEEEECCHHHHHHHhccCEEEEecCCCCC-cccCHHHHhcCCCCc
Confidence 0013478999999999999999999999999999999999999997 4 5 799999999988642
Q ss_pred chhh-hhccCCCccccCCCCCchhhHHHHhhcccceEE-EEEEEECccccCCCCCCeeEEEEeCCe-EEEEeCCCChHHH
Q psy7003 920 RIVE-MFKLEPTATKSKFSPDSNARWEILEAGKKLFKI-KGAAEFGPQYHYTMEGQTALCVPSEDG-VDIYAASQWVTLV 996 (1520)
Q Consensus 920 ~i~~-~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~vv-eg~~~~~~q~H~~mEp~~a~A~~~ed~-l~V~~sTQ~p~~v 996 (1520)
.... ....+.||+ +++|++++ ++| |++|++++|+|+||||++|+|+|++|+ |+||+|||+|+.+
T Consensus 722 ~~~~~~~~~~~GD~-----------~~af~~a~--~vv~e~~~~~~~q~H~~mEp~~~vA~~~~dg~l~V~~sTQ~p~~~ 788 (1344)
T PLN00192 722 EVPPFLYPKPVGDI-----------SKGMAEAD--HKILSAEIKLGSQYYFYMETQTALALPDEDNCIVVYSSTQCPEYV 788 (1344)
T ss_pred ccChhhcccccCCH-----------HHHhccCC--eEEEEEEEEECCEeeeeccCceEEEEEcCCCCEEEEECCCCHHHH
Confidence 1111 111223443 35689999 866 999999999999999999999998665 9999999999999
Q ss_pred HHHHHHHhCCCCCcEEEEecccCCCCCCCCCCCchHHHHHHHHHHhcCCcEEEEcChHHHHhccCCCCcEEEEEeeeccC
Q psy7003 997 QESVAGVLGLPNNRVNVKTRRIGGGYGAKLSRSCYPAVIAAVCSNVINKPVRIVMSIESMMGALGGRYPVYATYEIGTIG 1076 (1520)
Q Consensus 997 q~~vA~~LGlp~~kVrV~~~~vGGgFG~K~~~~~~~~~~AAlaA~~~gRPVrl~~sRee~m~~~~~R~~~~~~~~~~~~~ 1076 (1520)
|..||++||||.+||||+++++|||||+|..+....+++||++|+++||||||+|+|+|+|.++++|||+.++|
T Consensus 789 r~~vA~~Lgip~~~VrV~~~~vGGgFGgK~~~~~~~~~~aAlaA~~~gRPVr~~~sR~Edm~~~~~R~~~~~~~------ 862 (1344)
T PLN00192 789 HSVIARCLGIPEHNVRVITRRVGGGFGGKAVKSMPVATACALAAFKLQRPVRMYLNRKTDMIMAGGRHPMKITY------ 862 (1344)
T ss_pred HHHHHHHhCCChHHEEEEecccccCCCccccccchHHHHHHHHHHHhCCCEEEEecHHHHhhhcCCcCceEEEE------
Confidence 99999999999999999999999999999887666678999999999999999999999999999999999888
Q ss_pred CCccccccCCCccchhhhhhhhccceeeeccccccccccCcchhhhhccccceeeeeecccccccccccccceeeeCCCC
Q psy7003 1077 GNLSIKHEHPEFSSDVFLLLEVVGATITIRDTFGLEQTVSPEEYLSIDMNKKVITYITFCPLIKNSYYLRTYKCGVDKNG 1156 (1520)
Q Consensus 1077 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~g~d~dG 1156 (1520)
|+|+|+||
T Consensus 863 ------------------------------------------------------------------------k~g~~~dG 870 (1344)
T PLN00192 863 ------------------------------------------------------------------------SVGFKSDG 870 (1344)
T ss_pred ------------------------------------------------------------------------EEEECCCC
Confidence 99999999
Q ss_pred cEEEEEEEEEEecCCCcccchhhhHhhcccCCCCCCCCceEEEEEEEecCCCCCcccCCCCchhHHHHHHHHHHHHHHHh
Q psy7003 1157 VIQNLSTVFNVDKGMTLNENGFLHVRFGLGQASIYDPSTFRVVANAVRTDKPTYGFTRSPGACEVTAFIEHVMDHIATVV 1236 (1520)
Q Consensus 1157 ~i~al~~~~~~d~Ga~~~~~~~~~~~~~~~~~~~Y~ipn~r~~~~~v~TN~p~~ga~Rg~G~~q~~fa~E~~mD~iA~~l 1236 (1520)
+|++++++++.|+|+|.+.+..+ .....+..++|+|||++++++.|+||++|+|||||||.+|++|++|++||++|++|
T Consensus 871 ~I~a~~~~~~~d~Ga~~~~~~~~-~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~pq~~fa~E~~mD~lA~~l 949 (1344)
T PLN00192 871 KITALHLDILINAGISPDISPIM-PRNIIGALKKYDWGALSFDIKVCKTNLSSRSAMRAPGEVQGSYIAEAIIEHVASTL 949 (1344)
T ss_pred CEEEEEEEEEEecccCCCcchHH-HHHHhhcCCCcCCCceEEEEEEEECCCCCCCcccCCCHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999998765333 33333567999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHhcCC-----------------chHHHHHHHHHhccChHHHHHHHHHHhhhhhhhhhhhhhhhhccCCccc
Q psy7003 1237 NRDPTDVRIANLRN-----------------EDVKKFYQQFRGSVKYKERRDAIETFNAVRVLISQYSLRHCFQNNRWRK 1299 (1520)
Q Consensus 1237 g~DP~e~R~~Nl~~-----------------~~~~~~~~~~~~~~~~~~r~~~~~~~n~~~~~~~~~~~~~~~~~~~~~k 1299 (1520)
||||+|||++|++. .++.++|+++++.++|++|++++++||+ .|+|+|
T Consensus 950 g~DP~e~R~~Nl~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~r~~~~~~~n~---------------~~~~~k 1014 (1344)
T PLN00192 950 SMDVDSVRKINLHTYESLKLFYGDSAGEPSEYTLPSIWDKLASSSEFKQRTEMVKEFNR---------------SNKWKK 1014 (1344)
T ss_pred CcCHHHHHHhcCCCccccccCCCCcccccCCCcHHHHHHHHHHhcChHHHHHHHHHHhh---------------cCCceE
Confidence 99999999999981 1588999999999999999999999998 799999
Q ss_pred cccceEEEEeccCCCCcceEEEEEEcCCCeEEEEecCcccCcchHHHHHHHHHHHhCC--------CCCcEEEecCCCCC
Q psy7003 1300 RGISAVVTLFPLGFYDVSYAILSVFRRDATVAITTSGIEIGQGLHTKVAQACAYELGI--------PIEKIVLKPAQNNI 1371 (1520)
Q Consensus 1300 rGig~~~~~~~~g~~~~~~a~v~v~~~DGsV~i~~g~~e~GQG~~T~~aQiaA~~Lgi--------p~e~I~v~~~dT~~ 1371 (1520)
||||++++.|+++++ ++.|.|+|+ .||+|.|.||++|||||++|+++||||++||| |+|+|+|..+||+.
T Consensus 1015 rGig~~~~~~~~~~~-~~~a~v~i~-~DGsv~v~~G~~e~GQG~~T~~aQiaA~~LGi~~~~~~~ip~e~I~v~~~dT~~ 1092 (1344)
T PLN00192 1015 RGISRVPIVHEVMLR-PTPGKVSIL-SDGSIAVEVGGIEIGQGLWTKVKQMAAFGLGMIKCDGGEDLLDKIRVIQSDTLS 1092 (1344)
T ss_pred EEEEEEEEEEecccc-CCceEEEEe-CCceEEEEECCCCCCCCHHHHHHHHHHHHhCCccccccCCChhhEEEEecCCCC
Confidence 999999999998654 578999985 59999999999999999999999999999995 99999999999999
Q ss_pred CCCCCCCcccccccchHHHHHHHHHHHHHHhhhhhhc------CCCHHHHHHHHhhcCceeEEEEEeeccCCCCCCCccc
Q psy7003 1372 FPNAANTGGSTASDNAARCILLCCQELKTRLMPYMDK------GKSWEKTISDAFERGVDLQVTKSVSSQQTPDLLPMYT 1445 (1520)
Q Consensus 1372 ~p~~~~t~gS~~t~~~g~Av~~Ac~~l~~rl~~~~~~------~~~w~~~~~~a~~~gv~l~~~~~~~~~~~~~~~~~~~ 1445 (1520)
+||+++|+|||+|+++|.||++||++||+||.+++++ ..+|++++..++..+++|+++++|.. +...+.|+
T Consensus 1093 ~p~~~~t~gSr~t~~~G~Av~~Ac~~l~~rl~~~a~~~~~~~~~~~~~~~~~~a~~~~~~L~a~~~~~~---~~~~~~y~ 1169 (1344)
T PLN00192 1093 MIQGGFTAGSTTSESSCEAVRLCCVILVERLKPIKERLQEQMGSVTWDMLISQAYMQSVNLSASSYYTP---DPSSMEYL 1169 (1344)
T ss_pred CCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHhcCCCCCeEEEEEECC---CCCCcccc
Confidence 9999999999999999999999999999999998764 48999999888777788999999842 11123578
Q ss_pred cceEEEEEEEEECCCCcEEEEEEEEEEecCcccChHHHhHHhHhHHHHHHHHHHccceeeeCCCceeecCCCCC
Q psy7003 1446 IPTAAATEVEVDLLTGQHQILRVDILEDTGQSINPAIDIGQIQGAFIMGIGLWTFEHQIHDKRTGALLTNRTWV 1519 (1520)
Q Consensus 1446 ~~ga~~aEVEVD~~TG~v~V~r~~~~~D~G~~INP~~~~GQIeGg~vqGiG~aL~Ee~~~d~~~G~llt~~~w~ 1519 (1520)
+||++++|||||++||+|+|+|+++++|||++|||.+++|||||||+||||++|+||++||+ +|+++|++.|+
T Consensus 1170 ~~ga~~~eVEVD~~TG~v~vlr~~~~~D~G~~INP~i~~GQIeGg~vqGiG~al~Ee~~yd~-~G~llt~~~~d 1242 (1344)
T PLN00192 1170 NYGAAVSEVEVDLLTGETTILRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYTTNS-DGLVVTDGTWT 1242 (1344)
T ss_pred ceeEEEEEEEEecCCCcEEEEEEEEEEecCcccCHHHHHHHHHHHHHHHHhHHhceeEEECC-CCCCCCCChhh
Confidence 89999999999999999999999999999999999999999999999999999999999995 69999999996
No 4
>PLN02906 xanthine dehydrogenase
Probab=100.00 E-value=3.8e-211 Score=2069.28 Aligned_cols=1076 Identities=31% Similarity=0.476 Sum_probs=927.2
Q ss_pred CCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEECCccCCCCcccccccccchhhHHhcCCcEEEEecCCCCCCCCCCHHH
Q psy7003 40 GTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTSSHPVTGVDSTYSVNACLVLVHMCGGWAITTVEGLGSKKKGYHNVQ 119 (1520)
Q Consensus 40 ~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~~~~~~~~~~~~~~~v~scl~~~~~~~g~~i~T~eg~~~~~~~~h~vq 119 (1520)
++||++|||+ +||+|||.||++|+||||||+|+++|+.+|++++++|||||+|+++++|++|+|||||+++.+.+||||
T Consensus 1 ~~~ll~~LR~-~~l~g~k~gC~~g~CGaCtv~~~~~~~~~~~~~~~~v~sC~~~~~~~~g~~i~Tvegl~~~~~~~~~vq 79 (1319)
T PLN02906 1 HQTLLEYLRD-LGLTGTKLGCGEGGCGACTVMVSHYDRKTGKCVHYAVNACLAPLYSVEGMHVITVEGIGNRRDGLHPVQ 79 (1319)
T ss_pred CCcHHHHHHh-CCCCCCCCCcCCCCCCCeEEEECCccccCCccCCeEehhhHHHHHHhCCCEEEecCCCCCCCCCCCHHH
Confidence 4799999998 999999999999999999999999999999999999999999999999999999999997666899999
Q ss_pred HHHHHhCCCCCCCCchhHHHHHhhhhccccccccCCcchhhHHhhhhhccCCCcchhHHHHHHHHHHHHHHHhcCCCCCC
Q psy7003 120 TRLATMNGSQCGYCSPGMVMAMYSRHRLTASTMCGHNFTKTLLLQMYCIFLPPFSLEVLFVILLIFVIVSFLEGKKYKVT 199 (1520)
Q Consensus 120 ~~~~~~~~~qcg~ctpg~vm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 199 (1520)
++|+++||+|||||||||||+||+ ||++++..||
T Consensus 80 ~a~~~~~~~QCG~CtpG~vm~~~~----------------------------------------------ll~~~~~~~~ 113 (1319)
T PLN02906 80 EALASMHGSQCGFCTPGFIMSMYA----------------------------------------------LLRSSKTPPT 113 (1319)
T ss_pred HHHHHcCCCcCCCCchHHHHHHHH----------------------------------------------HHHhCCCCCC
Confidence 999999999999999999999999 7887744789
Q ss_pred HHHHHHHhcCCccCCCCcHHHHHHHHHhhhhcCcccccccc-cccccccccccccccccccccccccccchhhhhhhhhc
Q psy7003 200 KSEVEGALGGNICRCTGFRPILDAFQSFSCDASDSVQRKCA-DIEVRGKRDFISHESLGTQLLDWAFDTLVFSVLEFRLA 278 (1520)
Q Consensus 200 ~~~i~~~~~gn~crctgy~~i~~a~~~~~~~~~~~~~~~~~-d~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (1520)
++||+++|+|||||||||+||++|+++++.+......+.|. ++++ +.
T Consensus 114 ~~~i~~~l~gnlCRCtgy~~i~~a~~~~~~~~~~~~~~~~~~~~~~-----------~~--------------------- 161 (1319)
T PLN02906 114 EEQIEECLAGNLCRCTGYRPILDAFRVFAKTDDALYTGVSSLSLQD-----------GE--------------------- 161 (1319)
T ss_pred HHHHHHHhcCCcccCCCCHHHHHHHHHHHhcccccCCcccchhhhh-----------cc---------------------
Confidence 99999999999999999999999999999764211111121 2222 00
Q ss_pred ccccccccccccccCCCcceEEEECCEEEEecccCCCCcchhHHHHhhhcccCccccccCCCccceeeeeccCCCccccc
Q psy7003 279 TLIIVPILLPRLFSDTSSTVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTSSHPVTGVD 358 (1520)
Q Consensus 279 ~~~~~p~~~~~l~~~~~~~~~f~~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~~g~cGactV~v~~~hpvq~~~ 358 (1520)
.+|.+.+
T Consensus 162 -------------------------------------------------------~~~~~~~------------------ 168 (1319)
T PLN02906 162 -------------------------------------------------------PICPSTG------------------ 168 (1319)
T ss_pred -------------------------------------------------------ccccccC------------------
Confidence 1221110
Q ss_pred ccccccccccccccCccccccCCccchhhhhcccCCCCcccccccccccccccccccccCCCCCCCCCh-hhhccccccc
Q psy7003 359 STYSVNACGDRCFTRNICRCTGFRPILDAFQSFSCDASDSVQRKCADIEVRGKRDFISHEGLPEPEYDP-TYRKNLAVSL 437 (1520)
Q Consensus 359 ~~~~~~~Cg~~C~~gNLCRCTgyrpIlda~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~ 437 (1520)
..| .|- .. .. +....+. +..+.+ .+ ...+.
T Consensus 169 -----~~~----------~~~--~~----------~~--~~~~~~~-----------------~~~~~~~~~---~~~~~ 199 (1319)
T PLN02906 169 -----KPC----------SCG--SK----------TT--SAAGTCK-----------------SDRFQPISY---SEIDG 199 (1319)
T ss_pred -----ccc----------ccc--cc----------cc--ccccccc-----------------ccccccccc---ccccc
Confidence 000 000 00 00 0000000 000000 00 12356
Q ss_pred ccCCCCCCccccccccCCCCccceeecCCCCCCcccccccccccccccccccccccCCCCchhhhhhhccccccccCccE
Q psy7003 438 FYKSHINPSIHNRTVMGRGDVRSLFFGSSTLGEVPTRYKLDLMGSCKLKTKLDQSEDSNDLDTCLIELALTPVNVNVEGI 517 (1520)
Q Consensus 438 ~y~~s~epi~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~a~~~~~i~~~~~ 517 (1520)
+|+++||||||++|+... ...+.|.+ .++..
T Consensus 200 ~~~~~~~~~f~~~l~~~~--~~~~~~~~-----------------------------------------------~~~~~ 230 (1319)
T PLN02906 200 SWYTEKELIFPPELLLRK--LTPLKLLG-----------------------------------------------NGGLT 230 (1319)
T ss_pred ccCccccccCCHHHhhCC--CcceeecC-----------------------------------------------CCCce
Confidence 899999999999986421 12222221 02467
Q ss_pred EEEcCCHHHHHHHHhcCCCCCCcEEEEecchhhhccCCC--CCCeeeeCCCcccccceEEeCCeEEEccccCHHHHHHhh
Q psy7003 518 WYIVTEVREIFEIFDGLEANQTYMLVGGNTGYGVYRPRV--PVDVYIQIRDIKELRQIFTRNGYVLMGSATTLTEAMDYF 595 (1520)
Q Consensus 518 ~~rPtSLeEal~ll~~~p~~~~a~lVAGGTdLgv~~k~~--~~~~lIdIs~I~EL~~I~~~~~~L~IGA~vTlsel~e~L 595 (1520)
||+|+||+||+++|++++ ++++|||||||+++++.+ .++++|||++|+||+.|+.++++|+|||++||+++++.|
T Consensus 231 ~~~P~tl~ea~~ll~~~~---~a~ivAGGTdl~~~~~~~~~~~~~lIdi~~I~eL~~I~~~~~~l~IGA~vT~~el~~~l 307 (1319)
T PLN02906 231 WYRPTSLQHLLELKAEYP---DAKLVVGNTEVGIEMRFKNAQYPVLISPTHVPELNAIKVKDDGLEIGAAVRLSELQNLF 307 (1319)
T ss_pred EECcCCHHHHHHHHHhCC---CCEEEEcCchhHHHhhhccCCCCeEEECCCChhhhcEEecCCEEEEecCCcHHHHHHHH
Confidence 999999999999999998 899999999999987644 448999999999999999999999999999999999876
Q ss_pred hhccCC--chhhhhHHHHHHHHHhhcchhHhccc---ccCCCCCCCCCcc-----CCcEEEEEecCc-eee--ccccc--
Q psy7003 596 DRTSKT--DANFEYMRIMKDHLEQVAHYAVRNFA---LGLSTTEVSPSLW-----SGARMIQIERAM-SQG--SEDFE-- 660 (1520)
Q Consensus 596 ~~~~~~--~~~~~~~~~La~al~~IAs~qIRN~A---GNL~~asp~SDL~-----lgA~V~I~s~~g-~R~--l~dFf-- 660 (1520)
...+.+ +...+.++.|.+++++||++||||+| |||++++|+||++ +||+|+|.+.+| .|. ++|||
T Consensus 308 ~~~i~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~asP~sD~~p~LlAl~A~v~l~s~~g~~R~vpl~dFf~g 387 (1319)
T PLN02906 308 RKVVKERPAHETSACKAFIEQLKWFAGTQIRNVASIGGNICTASPISDLNPLWMAAGATFVIISCDGDIRSVPASDFFLG 387 (1319)
T ss_pred HHHhhhcchhhhHHHHHHHHHHHHhCCHhhcCceechhhhccCCCchhHHHHHHHcCcEEEEEcCCCCeEEEEHHHhcCc
Confidence 654321 23456789999999999999999999 9999999999999 999999999886 576 89999
Q ss_pred -------cCce-eeeeeCCCCcc---------------------------c---------ccccccc-------------
Q psy7003 661 -------TKQN-LWPLTKPLPKI---------------------------D---------AITQCAG------------- 683 (1520)
Q Consensus 661 -------~~EI-tsI~IP~~~~~---------------------------~---------~arIa~G------------- 683 (1520)
++|| ++|+||...+. + ++||+||
T Consensus 388 ~~kt~L~~~Eil~~I~iP~~~~~~~~~~~K~~~R~~~dia~V~~A~~v~l~~~~~~~~i~~aria~Ggva~~p~ra~~~E 467 (1319)
T PLN02906 388 YRKVDLKPDEILLSVFLPWTRPFEYVKEFKQAHRRDDDIAIVNAGMRVKLEEKDGEWIVSDASIAYGGVAPLSVSARKTE 467 (1319)
T ss_pred cccccCCCCceEEEEEccCCCCCccEEEEEEcCccccchhheeeEEEEEEecCCCCceEeEEEEEEeccCCceecHHHHH
Confidence 5799 99999965321 1 3688898
Q ss_pred ----------------------cccccCCCCCCcHHHHH--------HHHHhhcCCC--------ccccc-cchhhhhcc
Q psy7003 684 ----------------------EAEYVNDLPQLSEEYFA--------SVVLAERGPA--------KIQSI-DSTLALVSC 724 (1520)
Q Consensus 684 ----------------------El~p~~d~P~gS~EYRr--------KF~L~v~~~~--------~i~~~-~s~~~~~~~ 724 (1520)
++.|..|.+++|++||| |||++++.++ .+++. .|+...++|
T Consensus 468 ~~L~G~~~~~~~i~~A~~~l~~~~~p~~d~~~~sa~YR~~la~~ll~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (1319)
T PLN02906 468 EFLIGKPWNKETLQDALKVLQKDILIKEDAPGGMVEFRKSLALSFFFKFFLWVSHQLEADGSTIETFPESHLSAAQPFPR 547 (1319)
T ss_pred HHhcCCCCCHHHHHHHHHHHHhccCCCcCCCCCCHHHHHHHHHHHHHHHHHHHhhhccccccccccCChhhccccccccC
Confidence 56788888899999999 8999998554 24445 888999999
Q ss_pred cCCCCccccccccCCCCCCCCCCccchhhhcccccccccCCCCCCCcEEEEEEecCCCCeEeecCCchhhhcCCCEEEEE
Q psy7003 725 AMSQGSEDFETKQNLWPLTKPLPKIDAITQCAGEAEYVNDLPQLSEEYFASVVLADRGPAKIQSIDSTLALAYPGVHTFV 804 (1520)
Q Consensus 725 ~~s~g~q~~~~~~~~~~iGk~~~r~da~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~ahA~I~sID~s~A~a~PGV~avv 804 (1520)
|+|+|+|.|+..+..|+|||+++|+|+..||||+++|++|++.+||||||++||||++||+|++||+++|++||||++|+
T Consensus 548 ~~~~~~q~~~~~~~~~~vGk~~~r~d~~~kvtG~a~Y~~Di~~~~g~L~a~~vrSp~aharI~sID~s~A~~~pGV~~v~ 627 (1319)
T PLN02906 548 PSSVGMQDYETVKQGTAVGQPEVHLSAELQVTGEAEYADDIPMPPNTLHAALVLSTKPHARILSIDDSEAKSSPGFAGIF 627 (1319)
T ss_pred CCCccceecccccccccCCCCccCcchhhhcceeEEeccCCcCCCCCEEEEEEecCcCceEEeecchHHHhCCCCeEEEE
Confidence 99999999997666799999999999999999999999999435899999999999999999999999999999999999
Q ss_pred eccCCCCCCCCCCCCCCCcccccccCCCCcccccccccCCCCCCCCCCCCCCCCcccccccccCeeeecCCEEEEEEECC
Q psy7003 805 HAKDIPGKNLAIPAAWPGQIFEDEKAYPGVHTFVHAKDIPGKNLAIPAAWPGQIFEDEKLFAENEVEFAGQIIGAIIADN 884 (1520)
Q Consensus 805 t~~Dipg~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~~~~a~~~V~y~GqpVaaVvAet 884 (1520)
|++|+|+.|.++ ....|+|+||+++|+|+|||||+|||+|
T Consensus 628 t~~Dip~~~~~g----------------------------------------~~~~~~~~la~~~V~y~GqpVa~VvA~t 667 (1319)
T PLN02906 628 LAKDVPGDNMIG----------------------------------------PVVHDEELFATDVVTCVGQVIGVVVADT 667 (1319)
T ss_pred chhhCCCCCCCC----------------------------------------CCCCCeeEecCcEEEEcCCeEEEEEECC
Confidence 999999655331 1235789999999999999999999999
Q ss_pred HHHHHHHcccceEEEeeCCCCCCCHHHHhhcCCccchhhh--hccCCCccccCCCCCchhhHHHHhh--cccceEEEEEE
Q psy7003 885 FKSAYEAAKMVKVVYSDVKTPKLDIKQIVQDGDKARIVEM--FKLEPTATKSKFSPDSNARWEILEA--GKKLFKIKGAA 960 (1520)
Q Consensus 885 ~~~A~~Aa~lV~VeYe~l~~~v~di~~Al~~~~~~~i~~~--~~~~~g~~~~~~~~~~~~~~~~~~~--a~~~~vveg~~ 960 (1520)
+++|++|+++|+|+||++| +++|+++|+++++ +|+. .....||+ +++|++ ++ ++||++|
T Consensus 668 ~~~A~~Aa~~V~Veye~lp-~v~~~~~Al~~~a---~~~~~~~~~~~Gdv-----------~~af~~a~a~--~vve~~~ 730 (1319)
T PLN02906 668 QENAKAAARKVKVEYEELP-AILSIEEAIEAGS---FHPNTERRLEKGDV-----------ELCFASGQCD--RIIEGEV 730 (1319)
T ss_pred HHHHHHHhCCCEEEEecCC-ccCCHHHHhcCCC---cccCCCceeecCCH-----------HHHhhccCCc--eEEEEEE
Confidence 9999999999999999998 6999999998875 3321 11233443 346888 68 9999999
Q ss_pred EECccccCCCCCCeeEEEEeCC--eEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCCCCCCCchHHHHHHH
Q psy7003 961 EFGPQYHYTMEGQTALCVPSED--GVDIYAASQWVTLVQESVAGVLGLPNNRVNVKTRRIGGGYGAKLSRSCYPAVIAAV 1038 (1520)
Q Consensus 961 ~~~~q~H~~mEp~~a~A~~~ed--~l~V~~sTQ~p~~vq~~vA~~LGlp~~kVrV~~~~vGGgFG~K~~~~~~~~~~AAl 1038 (1520)
++++|+|+||||++|+|+|+++ +|+||+|||+|+.+|..||++||||.+||||+++++|||||+|.++..+.+++||+
T Consensus 731 ~~~~~~H~~mEp~~~~A~~~~~~g~l~v~~sTQ~p~~~r~~vA~~Lgip~~kVrV~~~~vGGgFGgK~~~~~~~~~~aAl 810 (1319)
T PLN02906 731 QMGGQEHFYLEPNSSLVWTSDSGNEVHMISSTQAPQKHQKYVAHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIAAAAAV 810 (1319)
T ss_pred EECCccccccCCCeEEEEEeCCCCEEEEEECCcCHHHHHHHHHHHhCCChHHeEEEeCCcccCccccccccchHHHHHHH
Confidence 9999999999999999999865 69999999999999999999999999999999999999999999876556788899
Q ss_pred HHHhcCCcEEEEcChHHHHhccCCCCcEEEEEeeeccCCCccccccCCCccchhhhhhhhccceeeeccccccccccCcc
Q psy7003 1039 CSNVINKPVRIVMSIESMMGALGGRYPVYATYEIGTIGGNLSIKHEHPEFSSDVFLLLEVVGATITIRDTFGLEQTVSPE 1118 (1520)
Q Consensus 1039 aA~~~gRPVrl~~sRee~m~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1118 (1520)
+|+++||||||+|+|+|+|..+++||++.++|
T Consensus 811 aA~~~gRPVkl~~sReE~~~~~~~R~~~~~~~------------------------------------------------ 842 (1319)
T PLN02906 811 PAYLLNRPVKLTLDRDVDMMITGQRHAFLGKY------------------------------------------------ 842 (1319)
T ss_pred HHHHhCCCEEEEecHHHHhhhcCCccceEEEE------------------------------------------------
Confidence 99999999999999999999999999999988
Q ss_pred hhhhhccccceeeeeecccccccccccccceeeeCCCCcEEEEEEEEEEecCCCcccchhhhHhhcccCCCCCCCCceEE
Q psy7003 1119 EYLSIDMNKKVITYITFCPLIKNSYYLRTYKCGVDKNGVIQNLSTVFNVDKGMTLNENGFLHVRFGLGQASIYDPSTFRV 1198 (1520)
Q Consensus 1119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~g~d~dG~i~al~~~~~~d~Ga~~~~~~~~~~~~~~~~~~~Y~ipn~r~ 1198 (1520)
|+|+|+||+|++++++++.|+|+|.+.+..++.+...+..++|+|||+++
T Consensus 843 ------------------------------k~g~~~dG~I~a~~~~~~~d~Ga~~~~~~~v~~~~~~~~~~~Y~ipn~~~ 892 (1319)
T PLN02906 843 ------------------------------KVGFTNEGKILALDLEIYNNGGNSLDLSGAVLERAMFHSDNVYEIPNVRI 892 (1319)
T ss_pred ------------------------------EEEECCCCCEEEEEEEEEecCcccCCcchHHHHHHHHhcCCCccCcceEE
Confidence 99999999999999999999999998776666666667899999999999
Q ss_pred EEEEEecCCCCCcccCCCCchhHHHHHHHHHHHHHHHhCCCHHHHHHHhcCC-------------chHHHHHHHHHhccC
Q psy7003 1199 VANAVRTDKPTYGFTRSPGACEVTAFIEHVMDHIATVVNRDPTDVRIANLRN-------------EDVKKFYQQFRGSVK 1265 (1520)
Q Consensus 1199 ~~~~v~TN~p~~ga~Rg~G~~q~~fa~E~~mD~iA~~lg~DP~e~R~~Nl~~-------------~~~~~~~~~~~~~~~ 1265 (1520)
+++.|+||+||+|||||||.+|++|++|++||++|++|||||+|||++|++. .+++++|+++++.++
T Consensus 893 ~~~~v~TN~~~~ga~RG~G~pq~~fa~E~~mD~lA~~lG~DP~e~R~~Nl~~~g~~~~~g~~~~~~~~~~~l~~~~~~~~ 972 (1319)
T PLN02906 893 VGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRIAVELNKSPEEIREMNFQGEGSVTHYGQVLQHCTLPQLWDELKVSCD 972 (1319)
T ss_pred EEEEEECCCCCCCcccCCCHHHHHHHHHHHHHHHHHHhCcCHHHHHHHhCCCCCCCCcCCccccCCCHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999999999999999999999982 258999999999999
Q ss_pred hHHHHHHHHHHhhhhhhhhhhhhhhhhccCCccccccceEEEEeccCCC----CcceEEEEEEcCCCeEEEEecCcccCc
Q psy7003 1266 YKERRDAIETFNAVRVLISQYSLRHCFQNNRWRKRGISAVVTLFPLGFY----DVSYAILSVFRRDATVAITTSGIEIGQ 1341 (1520)
Q Consensus 1266 ~~~r~~~~~~~n~~~~~~~~~~~~~~~~~~~~~krGig~~~~~~~~g~~----~~~~a~v~v~~~DGsV~i~~g~~e~GQ 1341 (1520)
|++|++.++.||+ .|+|+|||||+++..++.++. +++.+.|+| ++||+|+|.+|++||||
T Consensus 973 ~~~r~~~~~~~~~---------------~~~~~krGiG~a~~~~g~~~~~~~~~~~~a~V~i-~~DGsV~V~~G~~e~GQ 1036 (1319)
T PLN02906 973 FLKRREEVDEFNA---------------KNRWKKRGVAMVPTKFGISFTTKFMNQAGALVHV-YTDGTVLVTHGGVEMGQ 1036 (1319)
T ss_pred HHHHHHHHHHHhh---------------cCCCceEEEEEEecccccccccccCCccceEEEE-cCCceEEEEECCccCCC
Confidence 9999988999988 799999999999999887653 578899997 57999999999999999
Q ss_pred chHHHHHHHHHHHhCCCCCcEEEecCCCCCCCCCCCCcccccccchHHHHHHHHHHHHHHhhhhhhc--CCCHHHHHHHH
Q psy7003 1342 GLHTKVAQACAYELGIPIEKIVLKPAQNNIFPNAANTGGSTASDNAARCILLCCQELKTRLMPYMDK--GKSWEKTISDA 1419 (1520)
Q Consensus 1342 G~~T~~aQiaA~~Lgip~e~I~v~~~dT~~~p~~~~t~gS~~t~~~g~Av~~Ac~~l~~rl~~~~~~--~~~w~~~~~~a 1419 (1520)
|++|+++||||++||||+|+|+|..+||+.+||+++|+|||+|+++|+||++||++||+||++++++ ..+|++++..+
T Consensus 1037 G~~T~~aQiaAe~LGip~d~V~v~~~DT~~~p~~~gT~aSr~t~~~G~Av~~Aa~~l~~rl~~~a~~~~~~~~~~l~~~~ 1116 (1319)
T PLN02906 1037 GLHTKVAQVAASAFNIPLSSVFISETSTDKVPNASPTAASASSDMYGAAVLDACEQIKARMEPVASKLNFSSFAELVTAC 1116 (1319)
T ss_pred ChHHHHHHHHHHHHCCCHHHEEEEccCCCCCCCCCCCccchhhHhHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999999999765 58999999998
Q ss_pred hhcCceeEEEEEeeccC-------CCCCCCccccceEEEEEEEEECCCCcEEEEEEEEEEecCcccChHHHhHHhHhHHH
Q psy7003 1420 FERGVDLQVTKSVSSQQ-------TPDLLPMYTIPTAAATEVEVDLLTGQHQILRVDILEDTGQSINPAIDIGQIQGAFI 1492 (1520)
Q Consensus 1420 ~~~gv~l~~~~~~~~~~-------~~~~~~~~~~~ga~~aEVEVD~~TG~v~V~r~~~~~D~G~~INP~~~~GQIeGg~v 1492 (1520)
+..+++|+++++|.... ..+.++.|++||++++|||||++||+++|+|+++++|||++|||.+++|||||||+
T Consensus 1117 ~~~~~~l~a~~~~~~~~~~~~~~~~~~~~~~~~~~ga~~~eVeVD~~TG~v~vlr~~~v~D~G~~iNP~~~~GQieGg~v 1196 (1319)
T PLN02906 1117 YFQRIDLSAHGFYITPDIGFDWKTGKGNPFNYFTYGAAFAEVEIDTLTGDFHTRRVDIVMDLGYSINPAIDIGQIEGAFV 1196 (1319)
T ss_pred hccCCCeEEEEEecCCCcccccccccCCCccceeeeEEEEEEEEecCCCcEEEEEEEEEEecCccCCHHHHhHhhHHHHH
Confidence 87788899998885311 01123457899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHccceeeeCCC------ceeecCCCCC
Q psy7003 1493 MGIGLWTFEHQIHDKRT------GALLTNRTWV 1519 (1520)
Q Consensus 1493 qGiG~aL~Ee~~~d~~~------G~llt~~~w~ 1519 (1520)
||||++|+||+.||+++ |+++|++.|+
T Consensus 1197 qGiG~aL~Ee~~~d~~~~~~~~~G~llt~~~~~ 1229 (1319)
T PLN02906 1197 QGLGWVALEELKWGDAAHKWIRPGSLFTCGPGT 1229 (1319)
T ss_pred HHHHHHhcCceEEcccccccCCCCccccCCCcc
Confidence 99999999999999653 9999999996
No 5
>PRK09800 putative hypoxanthine oxidase; Provisional
Probab=100.00 E-value=7.7e-158 Score=1516.14 Aligned_cols=630 Identities=20% Similarity=0.228 Sum_probs=537.8
Q ss_pred CCCCCCCccchhhhcccccccccCCCCCCCcEEEEEEecCCCCeEeecCCchhhhcCCCEEEEEeccCCCCCCCCCCCCC
Q psy7003 741 PLTKPLPKIDAITQCAGEAEYVNDLPQLSEEYFASVVLADRGPAKIQSIDSTLALAYPGVHTFVHAKDIPGKNLAIPAAW 820 (1520)
Q Consensus 741 ~iGk~~~r~da~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~ahA~I~sID~s~A~a~PGV~avvt~~Dipg~n~~~~~~~ 820 (1520)
.|||+++|+|+..||||+++|++|+ .+|||||++++|||++||+|+|||+++|++||||++|+|++|+|. +.+.+.
T Consensus 171 ~VGk~~~R~d~~~kvtG~a~Y~~D~-~~pgmL~a~vvrSp~ahArI~sID~s~A~a~pGV~~Vvt~~Dvp~-~~~~~~-- 246 (956)
T PRK09800 171 VIGKHYPKTDAAKMVQAKPCYVEDR-VTADACVIKMLRSPHAHALITHLDVSKAEALPGVVHVITHLNCPD-IYYTPG-- 246 (956)
T ss_pred cCCCCCCCcChHhhCcccccccccC-CCCCCEEEEEeecCCCcEEEeeeEHHHHHhCCCeEEEEcHHHCCc-cccccc--
Confidence 3799999999999999999999999 799999999999999999999999999999999999999999983 111000
Q ss_pred CCcccccccCCCCcccccccccCCCCCCCCCCCCCCCCcccccccccCeeeecCCEEEEEEECCHHHHHHHcccceEEEe
Q psy7003 821 PGQIFEDEKAYPGVHTFVHAKDIPGKNLAIPAAWPGQIFEDEKLFAENEVEFAGQIIGAIIADNFKSAYEAAKMVKVVYS 900 (1520)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~~~~a~~~V~y~GqpVaaVvAet~~~A~~Aa~lV~VeYe 900 (1520)
++.+ +.....|++ |++++|+|+||||++|||+|+++|++|+++|+|+||
T Consensus 247 -~~~~-----------------------------~~~~~~~~~-l~~~~Vry~G~~vaaVvAet~~~A~~A~~~V~Veye 295 (956)
T PRK09800 247 -GQSA-----------------------------PEPSPLDRR-MFGKKMRHVGDRVAAVVAESEEIALEALKLIDVEYE 295 (956)
T ss_pred -CcCC-----------------------------CCCCCCCcc-ccCCeEEEcCCeEEEEEECCHHHHHHHhcCCceEEE
Confidence 0000 000012445 458999999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHhhcCCccchhhhhc---------c-----------------------CCCccccCCCCCchhhHHHHh
Q psy7003 901 DVKTPKLDIKQIVQDGDKARIVEMFK---------L-----------------------EPTATKSKFSPDSNARWEILE 948 (1520)
Q Consensus 901 ~l~~~v~di~~Al~~~~~~~i~~~~~---------~-----------------------~~g~~~~~~~~~~~~~~~~~~ 948 (1520)
+|| |++|+++|++++++ .+|+... . +.+++-.......++.+++|+
T Consensus 296 ~Lp-~v~d~~~Al~~~a~-~vh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Nv~~~~~~~~Gd~~~af~ 373 (956)
T PRK09800 296 VLK-PVMSIDEAMAEDAP-VVHDEPVVYVAGAPDTLEDDNSHAAQRGEHMIINFPIGSRPRKNIAASIHGHIGDMDKGFA 373 (956)
T ss_pred eCC-ccCCHHHHhcCCCc-eecccccccccccccccccccccccccccccccccccccCCCCceeeeccccCCCHHHHHh
Confidence 997 79999999999873 3443100 0 011110000012234557899
Q ss_pred hcccceEEEEEEEECccccCCCCCCeeEEEEeCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCCCCCC
Q psy7003 949 AGKKLFKIKGAAEFGPQYHYTMEGQTALCVPSEDGVDIYAASQWVTLVQESVAGVLGLPNNRVNVKTRRIGGGYGAKLSR 1028 (1520)
Q Consensus 949 ~a~~~~vveg~~~~~~q~H~~mEp~~a~A~~~ed~l~V~~sTQ~p~~vq~~vA~~LGlp~~kVrV~~~~vGGgFG~K~~~ 1028 (1520)
+++ ++||++|++++|+|+||||++|+|+|++|+|+||+|||+|+.+|..||++||||.+||||+.+++|||||+|.+.
T Consensus 374 ~a~--~vve~~y~~~~~~H~~mEp~~aiA~~d~~~l~v~~stQ~p~~~r~~vA~~LGlp~~kVrV~~~~vGGgFG~K~~~ 451 (956)
T PRK09800 374 DAD--VIIERTYNSTQAQQCPTETHICFTRMDGDRLVIHASTQVPWHLRRQVARLVGMKQHKVHVIKERVGGGFGSKQDI 451 (956)
T ss_pred hCC--EEEEEEEEeCCcccccCCCceEEEEEeCCeeEEEECCCcHHHHHHHHHHHHCCCHHHeEEEcCCCCccCcCcccc
Confidence 999 999999999999999999999999998779999999999999999999999999999999999999999999864
Q ss_pred CchHHHHHHHHHHhcCCcEEEEcChHHHHhccCCCCcEEEEEeeeccCCCccccccCCCccchhhhhhhhccceeeeccc
Q psy7003 1029 SCYPAVIAAVCSNVINKPVRIVMSIESMMGALGGRYPVYATYEIGTIGGNLSIKHEHPEFSSDVFLLLEVVGATITIRDT 1108 (1520)
Q Consensus 1029 ~~~~~~~AAlaA~~~gRPVrl~~sRee~m~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1108 (1520)
. ....||++|+++||||||+|||+|+|...++||++.+++
T Consensus 452 ~--~e~~aA~aA~~~grPVkl~~tReE~~~~~~~R~~~~~~~-------------------------------------- 491 (956)
T PRK09800 452 L--LEEVCAWATCVTGRPVLFRYTREEEFIANTSRHVAKVTV-------------------------------------- 491 (956)
T ss_pred c--HHHHHHHHHHHhCCCEEEEeeHHHHhhCcCCCCceEEEE--------------------------------------
Confidence 3 445689999999999999999999999999999999988
Q ss_pred cccccccCcchhhhhccccceeeeeecccccccccccccceeeeCCCCcEEEEEEEEEEecCCCcccchhhhHhhcccCC
Q psy7003 1109 FGLEQTVSPEEYLSIDMNKKVITYITFCPLIKNSYYLRTYKCGVDKNGVIQNLSTVFNVDKGMTLNENGFLHVRFGLGQA 1188 (1520)
Q Consensus 1109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~g~d~dG~i~al~~~~~~d~Ga~~~~~~~~~~~~~~~~~ 1188 (1520)
|+|+|+||+|++++++++.|+|+|.+.+..+......+..
T Consensus 492 ----------------------------------------k~g~d~dG~I~a~~~~~~~d~Gay~~~~~~v~~~~~~~~~ 531 (956)
T PRK09800 492 ----------------------------------------KLGAKKDGRLTAVKMDFRANTGPYGNHSLTVPCNGPALSL 531 (956)
T ss_pred ----------------------------------------EEEECCCCCEEEEEEEEEEcCCcCCCcchHHHHHHHhhcC
Confidence 9999999999999999999999998766555444444466
Q ss_pred CCCCCCceEEEEEEEecCCCCCcccCCCCchhHHHHHHHHHHHHHHHhCCCHHHHHHHhcCCc-----------------
Q psy7003 1189 SIYDPSTFRVVANAVRTDKPTYGFTRSPGACEVTAFIEHVMDHIATVVNRDPTDVRIANLRNE----------------- 1251 (1520)
Q Consensus 1189 ~~Y~ipn~r~~~~~v~TN~p~~ga~Rg~G~~q~~fa~E~~mD~iA~~lg~DP~e~R~~Nl~~~----------------- 1251 (1520)
++|+|||++++++.|+||++++|+|||||.+|+.|++|++||++|++|||||+|||+||++..
T Consensus 532 ~~Y~ipn~~~~~~~v~TN~~p~ga~RG~G~pq~~fa~Es~mDelA~~lg~DPve~R~rN~~~~gd~~~~~~~~~~g~~~~ 611 (956)
T PRK09800 532 PLYPCDNVDFQVTTYYSNICPNGAYQGYGAPKGNFAITMALAELAEQLQIDQLEIIERNRVHEGQELKILGAIGEGKAPT 611 (956)
T ss_pred cCcccceEEEEEEEEECCCCCCCCcCCCCcchHHHHHHHHHHHHHHHhCcCHHHHHHHhCCCCCcccccccccccccccc
Confidence 899999999999999999999999999999999999999999999999999999999999720
Q ss_pred --------hHHHHHHHHHhccChHHHHHHHHHHhhhhhhhhhhhhhhhhccCCccccccceEEEEeccCC--CCcceEEE
Q psy7003 1252 --------DVKKFYQQFRGSVKYKERRDAIETFNAVRVLISQYSLRHCFQNNRWRKRGISAVVTLFPLGF--YDVSYAIL 1321 (1520)
Q Consensus 1252 --------~~~~~~~~~~~~~~~~~r~~~~~~~n~~~~~~~~~~~~~~~~~~~~~krGig~~~~~~~~g~--~~~~~a~v 1321 (1520)
.+.++|+++++.++|++|+. + +++|+ ||+|++...++.+. .+.+.+.|
T Consensus 612 ~~~~~~s~~~~~~L~~~~e~~~w~~~~~------~---------------~g~~~-~G~Gia~~~~~~g~~~~~~~~a~v 669 (956)
T PRK09800 612 SVPSAASCALEEILRQGREMIQWSSPKP------Q---------------NGDWH-IGRGVAIIMQKSGIPDIDQANCMI 669 (956)
T ss_pred cCccccCCCHHHHHHHHHHhcCcchhhh------h---------------cCCCe-eEEEEEEEEEcccCCCCCCceEEE
Confidence 16889999999899976522 1 46775 37777666554443 34678899
Q ss_pred EEEcCCCeEEEEecCcccCcchHHHHHHHHHHHhCCCCCcEEEecCCCCCCCCCCCCcccccccchHHHHHHHHHHHHHH
Q psy7003 1322 SVFRRDATVAITTSGIEIGQGLHTKVAQACAYELGIPIEKIVLKPAQNNIFPNAANTGGSTASDNAARCILLCCQELKTR 1401 (1520)
Q Consensus 1322 ~v~~~DGsV~i~~g~~e~GQG~~T~~aQiaA~~Lgip~e~I~v~~~dT~~~p~~~~t~gS~~t~~~g~Av~~Ac~~l~~r 1401 (1520)
+| ++||+|.|.+|+.|||||++|+++||+|++||||+|+|+|..+||+.+|++++|+|||+|.++|+||++||++||+|
T Consensus 670 ~l-~~dGsv~v~~g~~e~GqG~~T~~~QiaAe~LGip~d~V~v~~~DT~~~p~~~gt~aSr~t~~~G~Av~~Aa~~l~~k 748 (956)
T PRK09800 670 KL-ESDGTFIVHSGGADIGTGLDTVVTKLAAEVLHCPPQDVHVISGDTDHALFDKGAYASSGTCFSGNAARLAAENLREK 748 (956)
T ss_pred EE-CCCceEEEEECCCCCCccHHHHHHHHHHHHHCCCceeEEEEeCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHHHHH
Confidence 96 67999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhc----------------------CCCHHHHHHHHhhc--CceeEEEEEeeccCCCCCCCccccceEEEEEEEEE
Q psy7003 1402 LMPYMDK----------------------GKSWEKTISDAFER--GVDLQVTKSVSSQQTPDLLPMYTIPTAAATEVEVD 1457 (1520)
Q Consensus 1402 l~~~~~~----------------------~~~w~~~~~~a~~~--gv~l~~~~~~~~~~~~~~~~~~~~~ga~~aEVEVD 1457 (1520)
|..++++ ..+|.++...++.. +..+.+.++|. +. ..+++|+|+++|||||
T Consensus 749 l~~~aa~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~--~~~~~~~a~~aeVeVD 822 (956)
T PRK09800 749 ILFHGAQMLGEPVADVQLATPGVVRGKKGEVSFGDIAHKGETGTGFGSLVGTGSYI----TP--DFAFPYGANFAEVAVN 822 (956)
T ss_pred HHHHHHHHhCCCHHHEEEecCCEEeCCCCcccHHHHHHHHhcCCCCCCeEEEEEec----CC--CCCcceEEEEEEEEEE
Confidence 9766432 24688887766542 23577777773 11 1256899999999999
Q ss_pred CCCCcEEEEEEEEEEecCcccChHHHhHHhHhHHHHHHHHHHccceeeeCCCceeecCCCCC
Q psy7003 1458 LLTGQHQILRVDILEDTGQSINPAIDIGQIQGAFIMGIGLWTFEHQIHDKRTGALLTNRTWV 1519 (1520)
Q Consensus 1458 ~~TG~v~V~r~~~~~D~G~~INP~~~~GQIeGg~vqGiG~aL~Ee~~~d~~~G~llt~~~w~ 1519 (1520)
++||+++|+|+++++|||++|||.+++||||||++||||++|+|++.||+ +|+++|++-|+
T Consensus 823 ~~TG~vkvl~~~~~~D~G~vINP~~v~gQieGgi~qGiG~AL~Ee~~~d~-~G~~~~~~l~~ 883 (956)
T PRK09800 823 TRTGEIRLDKFYALLDCGTPVNPELALGQIYGATLRAIGHSMSEEIIYDA-EGHPLTRDLRS 883 (956)
T ss_pred CCCCcEEEEEEEEEEECCccCCHHHHHHHHHHHHHHHHHHHHhCCcEECC-CCcCCCCCccc
Confidence 99999999999999999999999999999999999999999999999995 69999998764
No 6
>TIGR03313 Se_sel_red_Mo probable selenate reductase, molybdenum-binding subunit. Our comparative genomics suggests this protein family to be a subunit of a selenium-dependent molybdenum hydroxylase, although the substrate is not specified. This protein is suggested by Bebien, et al., to be the molybdenum-binding subunit of a molydbopterin-containing selenate reductase. Xi, et al, however, show that mutation of this gene in E. coli conferred sensitivity to adenine, suggesting a defect in purine interconversion. This finding, plus homology of nearby genes in a 23-gene purine catabolism region in E. coli to xanthine dehydrogase subunits suggests xanthine dehydrogenase activity.
Probab=100.00 E-value=8.9e-155 Score=1489.24 Aligned_cols=630 Identities=19% Similarity=0.218 Sum_probs=537.1
Q ss_pred CCCCCCCccchhhhcccccccccCCCCCCCcEEEEEEecCCCCeEeecCCchhhhcCCCEEEEEeccCCCCCCCCCCCCC
Q psy7003 741 PLTKPLPKIDAITQCAGEAEYVNDLPQLSEEYFASVVLADRGPAKIQSIDSTLALAYPGVHTFVHAKDIPGKNLAIPAAW 820 (1520)
Q Consensus 741 ~iGk~~~r~da~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~ahA~I~sID~s~A~a~PGV~avvt~~Dipg~n~~~~~~~ 820 (1520)
.|||+++|+|+..||||+++|++|+ .+|||||++++|||++||+|+|||+++|++||||++|+|++|+|..+ +.+ .
T Consensus 167 ~iGk~~~R~d~~~kvtG~a~Y~~D~-~~pgmL~a~v~rSP~ahArI~sID~s~A~a~pGV~~Vvt~~D~p~~~-~~~-~- 242 (951)
T TIGR03313 167 IIGKNCPKIDAAKMVQAKPCYVEDR-VPADACVIKMLRSPHPHAWITHLDVSKAEALPGVVHVITHLNCPDIY-YTP-G- 242 (951)
T ss_pred cCCCCCcCcChHhhCccCccccccC-CCCCCEEEEEEecCCCcEEEEeeEHHHHHhCCCeEEEEeHHHCCccc-cCC-C-
Confidence 3799999999999999999999999 79999999999999999999999999999999999999999998321 100 0
Q ss_pred CCcccccccCCCCcccccccccCCCCCCCCCCCCCCCCcccccccccCeeeecCCEEEEEEECCHHHHHHHcccceEEEe
Q psy7003 821 PGQIFEDEKAYPGVHTFVHAKDIPGKNLAIPAAWPGQIFEDEKLFAENEVEFAGQIIGAIIADNFKSAYEAAKMVKVVYS 900 (1520)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~~~~a~~~V~y~GqpVaaVvAet~~~A~~Aa~lV~VeYe 900 (1520)
+. .++.. ..++++|++++|+|+||||++|||+|+|+|++|+++|+|+||
T Consensus 243 -~~-----------------------------~~~~~-~~~~~~l~~~~Vry~G~~vaaVvAet~~~A~~A~~~I~Veye 291 (951)
T TIGR03313 243 -GQ-----------------------------SAPEP-SPLDRRMFGQKMRHVGDRVAAVVAESEEIALHALKLIEVEYD 291 (951)
T ss_pred -Cc-----------------------------cCCCC-CCCcccccCCeEEEcCCEEEEEEECCHHHHHHHhcCCeeEEE
Confidence 00 00000 112334688999999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHhhcCCccchhhhhc--------------------------------cCCCccccCCCCCchhhHHHHh
Q psy7003 901 DVKTPKLDIKQIVQDGDKARIVEMFK--------------------------------LEPTATKSKFSPDSNARWEILE 948 (1520)
Q Consensus 901 ~l~~~v~di~~Al~~~~~~~i~~~~~--------------------------------~~~g~~~~~~~~~~~~~~~~~~ 948 (1520)
+|| +++|+++|+++++ +.+|+... ...+++-.......++.+++|+
T Consensus 292 ~Lp-~v~d~~~Al~~~a-p~ih~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Nv~~~~~~~~Gd~~~af~ 369 (951)
T TIGR03313 292 VLT-PVMSIDEAMAAEA-PIVHDEPIVYGAGAPDDLEEQNANADPRGEHMIINFPIGSRPRKNIAASVHGHIGDLNKGFA 369 (951)
T ss_pred eCC-ccCCHHHHhcCCC-CeeccccccccccccccccccccccccccccccccccccccCCCceeeeccccCCCHHHHHh
Confidence 997 7999999999987 34553210 0001110000112344567899
Q ss_pred hcccceEEEEEEEECccccCCCCCCeeEEEEeCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCCCCCC
Q psy7003 949 AGKKLFKIKGAAEFGPQYHYTMEGQTALCVPSEDGVDIYAASQWVTLVQESVAGVLGLPNNRVNVKTRRIGGGYGAKLSR 1028 (1520)
Q Consensus 949 ~a~~~~vveg~~~~~~q~H~~mEp~~a~A~~~ed~l~V~~sTQ~p~~vq~~vA~~LGlp~~kVrV~~~~vGGgFG~K~~~ 1028 (1520)
+++ ++||++|++++|+|+||||++|+|.|++|+++||+|||+|+.+|..||++||||.+||||+++++|||||+|.+.
T Consensus 370 ~A~--~vve~~y~~~~~~H~~mEp~~aiA~~d~~~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFG~K~~~ 447 (951)
T TIGR03313 370 EAD--VIIERTYESTQAQQCPTETHICFTYMDGERLVIHASTQVPWHVRRQVARIVGMKQHKVHVIKERVGGGFGSKQDI 447 (951)
T ss_pred cCC--EEEEEEEEECCEeeecCCCceEEEEEcCCeEEEEECCcCHHHHHHHHHHHHCCCHHHeEEEcCCCCcCcCCcccc
Confidence 999 999999999999999999999999998778999999999999999999999999999999999999999999864
Q ss_pred CchHHHHHHHHHHhcCCcEEEEcChHHHHhccCCCCcEEEEEeeeccCCCccccccCCCccchhhhhhhhccceeeeccc
Q psy7003 1029 SCYPAVIAAVCSNVINKPVRIVMSIESMMGALGGRYPVYATYEIGTIGGNLSIKHEHPEFSSDVFLLLEVVGATITIRDT 1108 (1520)
Q Consensus 1029 ~~~~~~~AAlaA~~~gRPVrl~~sRee~m~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1108 (1520)
. +...||++|+++||||||+|||+|+|.+.++||++.+++
T Consensus 448 ~--~e~~aA~aA~~~GrPVkl~~tReE~~~~~~~R~~~~~~~-------------------------------------- 487 (951)
T TIGR03313 448 L--LEEVCAWATWVTGRPVYFRYTREEEFICNTSRHVAKVTV-------------------------------------- 487 (951)
T ss_pred c--HHHHHHHHHHHhCCCEEEEeeHHHHhhccCCCCCeEEEE--------------------------------------
Confidence 3 445689999999999999999999999999999999888
Q ss_pred cccccccCcchhhhhccccceeeeeecccccccccccccceeeeCCCCcEEEEEEEEEEecCCCcccchhhhHhhcccCC
Q psy7003 1109 FGLEQTVSPEEYLSIDMNKKVITYITFCPLIKNSYYLRTYKCGVDKNGVIQNLSTVFNVDKGMTLNENGFLHVRFGLGQA 1188 (1520)
Q Consensus 1109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~g~d~dG~i~al~~~~~~d~Ga~~~~~~~~~~~~~~~~~ 1188 (1520)
|+|+|+||+|+|++++++.|+|+|.+.+..+.........
T Consensus 488 ----------------------------------------k~g~d~dG~I~A~~~~~~~d~Gay~~~~~~v~~~~~~~~~ 527 (951)
T TIGR03313 488 ----------------------------------------KLGAKKDGKLTAIDMDFRANTGPYGNHSLTVPSNGPALSL 527 (951)
T ss_pred ----------------------------------------EEEECCCCcEEEEEEEEEEcCccCcccchHHhhhhhhhcC
Confidence 9999999999999999999999998755444333322356
Q ss_pred CCCCCCceEEEEEEEecCCCCCcccCCCCchhHHHHHHHHHHHHHHHhCCCHHHHHHHhcCCc-----------------
Q psy7003 1189 SIYDPSTFRVVANAVRTDKPTYGFTRSPGACEVTAFIEHVMDHIATVVNRDPTDVRIANLRNE----------------- 1251 (1520)
Q Consensus 1189 ~~Y~ipn~r~~~~~v~TN~p~~ga~Rg~G~~q~~fa~E~~mD~iA~~lg~DP~e~R~~Nl~~~----------------- 1251 (1520)
++|+|||++++++.|+||++|.|||||||.+|+.|++|++||++|++|||||+|||+||++..
T Consensus 528 ~~Y~ipn~~~~~~~v~TN~~p~ga~Rg~G~~q~~fa~Es~mDelA~~lG~DP~e~R~rN~~~~gd~~~~~~~~~~g~~~~ 607 (951)
T TIGR03313 528 PLYPCDNVDFRVTTYYSNICPTGAYQGYGAPKGNFALTMAMAELAEELGIDQLEMIETNRVHEGQELKILGAIGEGKMPT 607 (951)
T ss_pred cCccCCeEEEEEEEEECCCCCCCCcCCCCcccHHHHHHHHHHHHHHHhCcCHHHHHHHhCCCCCcccccccccccccccc
Confidence 889999999999999999999999999999999999999999999999999999999999811
Q ss_pred --------hHHHHHHHHHhccChHHHHHHHHHHhhhhhhhhhhhhhhhhccCCccccccceEEEEeccCCC--CcceEEE
Q psy7003 1252 --------DVKKFYQQFRGSVKYKERRDAIETFNAVRVLISQYSLRHCFQNNRWRKRGISAVVTLFPLGFY--DVSYAIL 1321 (1520)
Q Consensus 1252 --------~~~~~~~~~~~~~~~~~r~~~~~~~n~~~~~~~~~~~~~~~~~~~~~krGig~~~~~~~~g~~--~~~~a~v 1321 (1520)
++.++|+++++.++|++|++ + +++|+ ||+|++...+..+.. +.+.+.|
T Consensus 608 ~~~~~~s~~~~~~l~~~~~~~~w~~~~~------~---------------~g~~~-~G~Gia~~~~~~g~~~~~~~~a~v 665 (951)
T TIGR03313 608 SVPKAASCALEEILRQGRELIEWDSPKQ------A---------------KGDWK-IGRGVAIIMQKSGIPDIDQANCMI 665 (951)
T ss_pred cccccCCCcHHHHHHHHHHhcCccchhh------h---------------ccCce-eeeEEEEEEecccCCCCCCccEEE
Confidence 36789999999999986532 1 46775 477777766555433 4678899
Q ss_pred EEEcCCCeEEEEecCcccCcchHHHHHHHHHHHhCCCCCcEEEecCCCCCCCCCCCCcccccccchHHHHHHHHHHHHHH
Q psy7003 1322 SVFRRDATVAITTSGIEIGQGLHTKVAQACAYELGIPIEKIVLKPAQNNIFPNAANTGGSTASDNAARCILLCCQELKTR 1401 (1520)
Q Consensus 1322 ~v~~~DGsV~i~~g~~e~GQG~~T~~aQiaA~~Lgip~e~I~v~~~dT~~~p~~~~t~gS~~t~~~g~Av~~Ac~~l~~r 1401 (1520)
++ ++||+|.|.+|+.|||||+.|+++||+|++||+|+|+|+|..+||+.+|++.+|+|||+|.++|.||++||++||+|
T Consensus 666 ~l-~~dG~v~v~~g~~e~GqG~~T~~~QiaAe~LGvp~d~V~v~~~DT~~~p~~~gt~aSr~t~~~G~Av~~Aa~~l~~k 744 (951)
T TIGR03313 666 KL-ESDGTFIVHSGGADIGTGLDTVVSKLTAEVLHCPMDDVHVISGDTDHALFDKGAYASSGTCFSGNAAKRAAENLREK 744 (951)
T ss_pred EE-cCCceEEEEECCCCCCccHHHHHHHHHHHHHCCCHHhEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 96 67999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhc----------------------CCCHHHHHHHHhhc--CceeEEEEEeeccCCCCCCCccccceEEEEEEEEE
Q psy7003 1402 LMPYMDK----------------------GKSWEKTISDAFER--GVDLQVTKSVSSQQTPDLLPMYTIPTAAATEVEVD 1457 (1520)
Q Consensus 1402 l~~~~~~----------------------~~~w~~~~~~a~~~--gv~l~~~~~~~~~~~~~~~~~~~~~ga~~aEVEVD 1457 (1520)
|..++++ .++|.+++..++.. +..+...+.|. +. ..+++|+|+++|||||
T Consensus 745 l~~~aa~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~a~~aeVeVD 818 (951)
T TIGR03313 745 ILFHGAEMLGEPVADVDLAAPGLVRGKTGEVSYFDIAHKAETGTGFGQLVGTGSYI----TS--EFAFPYGANFAEVAVN 818 (951)
T ss_pred HHHHHHHHhCCCHHHEEEecCCEEeCCCCcccHHHHHHHHhccCCCCCeEEEEEec----CC--CCCccceeEEEEEEEE
Confidence 9766432 24688887665531 23466666663 11 1256899999999999
Q ss_pred CCCCcEEEEEEEEEEecCcccChHHHhHHhHhHHHHHHHHHHccceeeeCCCceeecCCCCC
Q psy7003 1458 LLTGQHQILRVDILEDTGQSINPAIDIGQIQGAFIMGIGLWTFEHQIHDKRTGALLTNRTWV 1519 (1520)
Q Consensus 1458 ~~TG~v~V~r~~~~~D~G~~INP~~~~GQIeGg~vqGiG~aL~Ee~~~d~~~G~llt~~~w~ 1519 (1520)
++||+++|+|+++++|||++|||.+++||||||++||||++|+|++.||+ +|+++|++-|+
T Consensus 819 ~~TG~vkv~r~~~~~D~G~~INP~~v~gQieGg~~qGiG~AL~Ee~~~d~-~G~~~~~~l~~ 879 (951)
T TIGR03313 819 TRTGEIRLDKFYALLDCGTPVNPELALGQIYGATMRAIGHSMTEEIVYDD-NGIPLTRDLKS 879 (951)
T ss_pred CCCCcEEEEEEEEEEECCcccCHHHHHHHHHHHHHHHHHHHHhCCcEECC-CCcCCCCChhh
Confidence 99999999999999999999999999999999999999999999999995 79999998764
No 7
>TIGR03311 Se_dep_Molyb_1 selenium-dependent molybdenum hydroxylase 1. Members of this protein family show full length homology to the molybdenum-containing aldehyde oxido-reductase of Desulfovibrio gigas. Members, however, are found only within species that have, and near those genes that encode, a set of predicted accessory proteins for selenium-dependent molybdenum hydroxylases. The best known examples of such enzymes are forms of xanthine dehydrogenase and purine hydroxylase; this family appears to be another such enzyme.
Probab=100.00 E-value=1.8e-149 Score=1431.97 Aligned_cols=594 Identities=26% Similarity=0.325 Sum_probs=494.6
Q ss_pred CCCCCCccchhhhcccccccccCCCCCCCcEEEEEEecCCCCeEeecCCchhhhcCCCEEEEEeccCCCCCCCCCCCCCC
Q psy7003 742 LTKPLPKIDAITQCAGEAEYVNDLPQLSEEYFASVVLADRGPAKIQSIDSTLALAYPGVHTFVHAKDIPGKNLAIPAAWP 821 (1520)
Q Consensus 742 iGk~~~r~da~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~ahA~I~sID~s~A~a~PGV~avvt~~Dipg~n~~~~~~~~ 821 (1520)
|||+++|+|+..||||+++|++|+ .+|||||++++|||++||+|++||+++|++||||++|+|++|+|+.+.+.
T Consensus 162 iG~~~~R~d~~~kvtG~~~Y~~Di-~~pgmL~a~~vrSp~ahA~I~~ID~s~A~a~PGV~aVvt~~Dip~~~~~g----- 235 (848)
T TIGR03311 162 LGENFPRVDAVPKVLGEGVYVDDM-QIEGMLYGSALRSKYPRALVKSIDITVALKHPGVVAVLTAKDIPGNRKIG----- 235 (848)
T ss_pred CCCccCCcChhhhCcccccccccC-CCCCCEEEEEEeCCCCCEEEEeeEHHHHHhCCCcEEEEeHHHCCCccCCC-----
Confidence 678899999999999999999999 79999999999999999999999999999999999999999999643221
Q ss_pred CcccccccCCCCcccccccccCCCCCCCCCCCCCCCCccccc-cc-ccCeeeecCCEEEEEEECCHHHHHHHcccceEEE
Q psy7003 822 GQIFEDEKAYPGVHTFVHAKDIPGKNLAIPAAWPGQIFEDEK-LF-AENEVEFAGQIIGAIIADNFKSAYEAAKMVKVVY 899 (1520)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~~-~~-a~~~V~y~GqpVaaVvAet~~~A~~Aa~lV~VeY 899 (1520)
....|++ +| .+++|+|+|||||+|+|+|+++|++|+++|+|+|
T Consensus 236 -----------------------------------~~~~~~~~~~a~~~~Vry~Ge~VA~VvA~t~~~A~~A~~~V~Vey 280 (848)
T TIGR03311 236 -----------------------------------HIFKDWPALIAVGEITRYVGDAVALVAAKSKEALREALNLIKVDY 280 (848)
T ss_pred -----------------------------------CCCCCccccccCCCEEEEcCCeEEEEEECCHHHHHHHhCCCcEEE
Confidence 1112333 34 3589999999999999999999999999999999
Q ss_pred eeCCCCCCCHHHHhhcCCccchhhhhccCCCccccCCCCCchhhHHHHhhcccceEEEEEEEECccccCCCCCCeeEEEE
Q psy7003 900 SDVKTPKLDIKQIVQDGDKARIVEMFKLEPTATKSKFSPDSNARWEILEAGKKLFKIKGAAEFGPQYHYTMEGQTALCVP 979 (1520)
Q Consensus 900 e~l~~~v~di~~Al~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~vveg~~~~~~q~H~~mEp~~a~A~~ 979 (1520)
|++| +++|+++|++++++ .+|+. +++.....-..++.+++|++++ ++||++|++++|+|+||||++|+|+|
T Consensus 281 e~lp-~v~d~~~A~~~~a~-~i~~~-----~Nv~~~~~~~~Gdv~~af~~A~--~vve~~y~~~~~~h~~mEp~~~vA~~ 351 (848)
T TIGR03311 281 EELP-PLTSPEEALAEGAP-AIHPK-----GNILSEEHVVRGDAEEALENSA--YVVTNHYSTPFTEHAFLEPESALAVP 351 (848)
T ss_pred ecCC-CcCCHHHHhcCCCC-eECCC-----CCCcceeeecCCCHHHHhhcCC--eEEEEEEEECCEeeeecCCceEEEEE
Confidence 9997 79999999998863 34421 1110000001223446799999 99999999999999999999999999
Q ss_pred eCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCCCCCCCchHHHHHHHHHHhcCCcEEEEcChHHHHhc
Q psy7003 980 SEDGVDIYAASQWVTLVQESVAGVLGLPNNRVNVKTRRIGGGYGAKLSRSCYPAVIAAVCSNVINKPVRIVMSIESMMGA 1059 (1520)
Q Consensus 980 ~ed~l~V~~sTQ~p~~vq~~vA~~LGlp~~kVrV~~~~vGGgFG~K~~~~~~~~~~AAlaA~~~gRPVrl~~sRee~m~~ 1059 (1520)
++|+|+||+|||+|+.+|..+|++||||.+||||+.+++|||||+|.... ....||++|+++||||||+|||+|+|..
T Consensus 352 ~~~~l~v~~stQ~p~~~r~~vA~~Lglp~~~VrV~~~~vGGgFG~K~~~~--~~~~aA~~A~~~gRPVkl~~sR~E~~~~ 429 (848)
T TIGR03311 352 EGDGVIIYTSTQGVYDEQRELASLLGLPKEKIRVINKFVGGGFGGKEDMS--VQHHAALLAWATKRPVKVTLTRKESILV 429 (848)
T ss_pred eCCeEEEEECCcCHHHHHHHHHHHhCCChHHEEEEeCCCCCcCCcccccc--HHHHHHHHHHHhCCCEEEEechHHhhhc
Confidence 98889999999999999999999999999999999999999999999854 4567899999999999999999999999
Q ss_pred cCCCCcEEEEEeeeccCCCccccccCCCccchhhhhhhhccceeeeccccccccccCcchhhhhccccceeeeeeccccc
Q psy7003 1060 LGGRYPVYATYEIGTIGGNLSIKHEHPEFSSDVFLLLEVVGATITIRDTFGLEQTVSPEEYLSIDMNKKVITYITFCPLI 1139 (1520)
Q Consensus 1060 ~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1139 (1520)
.++||++.++|
T Consensus 430 ~~~R~~~~~~~--------------------------------------------------------------------- 440 (848)
T TIGR03311 430 HPKRHAMEMTF--------------------------------------------------------------------- 440 (848)
T ss_pred cCCCCceEEEE---------------------------------------------------------------------
Confidence 99999999988
Q ss_pred ccccccccceeeeCCCCcEEEEEEEEEEecCCCcccchhhhHhhcccCCCCCCCCceEEEEEEEecCCCCCcccCCCCch
Q psy7003 1140 KNSYYLRTYKCGVDKNGVIQNLSTVFNVDKGMTLNENGFLHVRFGLGQASIYDPSTFRVVANAVRTDKPTYGFTRSPGAC 1219 (1520)
Q Consensus 1140 ~~~~~~~~~k~g~d~dG~i~al~~~~~~d~Ga~~~~~~~~~~~~~~~~~~~Y~ipn~r~~~~~v~TN~p~~ga~Rg~G~~ 1219 (1520)
|+|+|+||+|++++++++.|+|+|.+.+..+..+...+..++|+|||++++++.|+||++|.|+|||||.+
T Consensus 441 ---------k~g~d~dG~i~a~~~~~~~d~Gay~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~p~ga~RG~G~p 511 (848)
T TIGR03311 441 ---------TTGCDEAGNLTAMKADIIADTGAYASLGGPVLQRACTHAAGPYKYPNVDIRGTAVYTNNPPAGAFRGFGVT 511 (848)
T ss_pred ---------EEEECCCCcEEEEEEEEEEccccCCCccHHHHHHHHHhcCCCccCceEEEEEEEEECCCCCCCCccCCChh
Confidence 99999999999999999999999988765555555556889999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhCCCHHHHHHHhcCCc--------------hHHHHHHHHHhccChHHHHHHHHHHhhhhhhhhh
Q psy7003 1220 EVTAFIEHVMDHIATVVNRDPTDVRIANLRNE--------------DVKKFYQQFRGSVKYKERRDAIETFNAVRVLISQ 1285 (1520)
Q Consensus 1220 q~~fa~E~~mD~iA~~lg~DP~e~R~~Nl~~~--------------~~~~~~~~~~~~~~~~~r~~~~~~~n~~~~~~~~ 1285 (1520)
|++|++|++||++|++|||||+|||++|++.. .+.++|+++++. | .
T Consensus 512 q~~fa~E~~mD~lA~~lg~DP~E~R~rN~~~~gd~~~~g~~~~~~~~~~~~l~~~~~~--~----------~-------- 571 (848)
T TIGR03311 512 QSNFAMECNLNLLAEKVGLSPWEIRFKNAVEPGDTLPNGQVVSEGTAIKETLLAVKEV--Y----------E-------- 571 (848)
T ss_pred HHHHHHHHHHHHHHHHhCcCHHHHHHHhCCCCCCcCCCCceeCCCchHHHHHHHHHHH--h----------h--------
Confidence 99999999999999999999999999999821 144444444331 1 1
Q ss_pred hhhhhhhccCCccccccceEEEEeccCCC--CcceEEEEEEcCCCeEEEEecCcccCcchHHHHHHHHHHHhCCCCCcEE
Q psy7003 1286 YSLRHCFQNNRWRKRGISAVVTLFPLGFY--DVSYAILSVFRRDATVAITTSGIEIGQGLHTKVAQACAYELGIPIEKIV 1363 (1520)
Q Consensus 1286 ~~~~~~~~~~~~~krGig~~~~~~~~g~~--~~~~a~v~v~~~DGsV~i~~g~~e~GQG~~T~~aQiaA~~Lgip~e~I~ 1363 (1520)
+++++|+++.....+.+.+ +.+.+.+.+ + ||+|.|.+|++|||||++|+++||+|++||||+|+|+
T Consensus 572 ----------~~~~~G~~~~~~~~g~~~~~~~~~~~~~~~-~-DGsv~v~~g~~e~GQG~~T~~aQiaAe~LGip~e~V~ 639 (848)
T TIGR03311 572 ----------KSPCAGIACAFKNSGVGVGIPDTGRCNLAV-E-DGKVHIRTSAACIGQGLGTVLTQIVCETTGLPPEVIV 639 (848)
T ss_pred ----------hccCCeEEEEEEEeccccCCCCcceEEEEE-c-CCEEEEEECCCCcCcCHHHHHHHHHHHHHCCCHHHEE
Confidence 1233455544443443332 335666664 5 9999999999999999999999999999999999999
Q ss_pred EecCCCCCCCCCCCCcccccccchHHHHHHHHHHHHHHhhhhhhcCCCHHHHHHHHhhc---C--ceeEEEEEeeccCCC
Q psy7003 1364 LKPAQNNIFPNAANTGGSTASDNAARCILLCCQELKTRLMPYMDKGKSWEKTISDAFER---G--VDLQVTKSVSSQQTP 1438 (1520)
Q Consensus 1364 v~~~dT~~~p~~~~t~gS~~t~~~g~Av~~Ac~~l~~rl~~~~~~~~~w~~~~~~a~~~---g--v~l~~~~~~~~~~~~ 1438 (1520)
|..+||+.+|++++|+|||+|.++|+||++||++||+||+.. .|+++....+.. . -.+...+.|
T Consensus 640 v~~~DT~~~p~~~gt~aSR~t~~~G~Av~~Aa~~l~~~l~~~-----~~~~l~~~~~~~~~~~~~~~~~~~~~~------ 708 (848)
T TIGR03311 640 CELPDTALTPDSGTTTASRQSLFTGEATRRAAAKLKEALRGR-----TLAELEGEEFYGEYHSITDPLNSDKEN------ 708 (848)
T ss_pred EEcCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhc-----CHHHcCCCEEeeccccccCcceeeccC------
Confidence 999999999999999999999999999999999999999743 354441110000 0 012222211
Q ss_pred CCCCccccceEEEEEEEEECCCCcEEEEEEEEEEecCcccChHHHhHHhHhHHHHHHHHHHccceeeeCCCceeecC
Q psy7003 1439 DLLPMYTIPTAAATEVEVDLLTGQHQILRVDILEDTGQSINPAIDIGQIQGAFIMGIGLWTFEHQIHDKRTGALLTN 1515 (1520)
Q Consensus 1439 ~~~~~~~~~ga~~aEVEVD~~TG~v~V~r~~~~~D~G~~INP~~~~GQIeGg~vqGiG~aL~Ee~~~d~~~G~llt~ 1515 (1520)
...+++|++++..|||| +|| +|+|+++++|||++|||.+++||||||++||||++|+|++.|| +|+++++
T Consensus 709 --~~~~~~~~~~~~~~eVd-~tG--~v~r~~~v~D~G~vINP~~veGQieGG~~qGlG~AL~Ee~~~d--~G~~~~~ 778 (848)
T TIGR03311 709 --PVSHVGYGYATQVVILD-DAG--KVEKVVAAYDVGRAINPLNLEGQIEGGIVMGLGYALTEDFPLR--EGIPTAK 778 (848)
T ss_pred --CCCccccceEEEEEEEC-CCC--eEEEEEEEEeCCccCCHHHHHHHHHHHHHHHHHHHhcCcEEec--CCeecCC
Confidence 11234566666666667 899 6789999999999999999999999999999999999999998 4998753
No 8
>COG4631 XdhB Xanthine dehydrogenase, molybdopterin-binding subunit B [Nucleotide transport and metabolism]
Probab=100.00 E-value=3.5e-132 Score=1141.43 Aligned_cols=628 Identities=30% Similarity=0.478 Sum_probs=592.7
Q ss_pred CCCCCCCCCccchhhhcccccccccCCCCCCCcEEEEEEecCCCCeEeecCCchhhhcCCCEEEEEeccCCCCCCCCCCC
Q psy7003 739 LWPLTKPLPKIDAITQCAGEAEYVNDLPQLSEEYFASVVLADRGPAKIQSIDSTLALAYPGVHTFVHAKDIPGKNLAIPA 818 (1520)
Q Consensus 739 ~~~iGk~~~r~da~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~ahA~I~sID~s~A~a~PGV~avvt~~Dipg~n~~~~~ 818 (1520)
..++|.+.++-++..+|+|.|.|+||+|.++|.||+++-.|+++||+|+++|.+++++.|||+.|+|++|+||.|...|
T Consensus 16 ~~~v~~~~~HeSAhkHV~GtA~YiDD~pepag~LH~~~gls~~aHAri~~mDl~~v~a~PGVv~vlta~DvPGenDisp- 94 (781)
T COG4631 16 RGGVGTSLRHESAHKHVTGTAVYIDDIPEPAGTLHGALGLSERAHARITRMDLSAVRAAPGVVDVLTAADVPGENDISP- 94 (781)
T ss_pred CCcccccccccchhhcccceeEEecCCCCcccchhhhccccccchheeeecchHHhhcCCCeEEEEEecCCCCCCCCCc-
Confidence 4578999999999999999999999999999999999999999999999999999999999999999999999986532
Q ss_pred CCCCcccccccCCCCcccccccccCCCCCCCCCCCCCCCCcccccccccCeeeecCCEEEEEEECCHHHHHHHcccceEE
Q psy7003 819 AWPGQIFEDEKAYPGVHTFVHAKDIPGKNLAIPAAWPGQIFEDEKLFAENEVEFAGQIIGAIIADNFKSAYEAAKMVKVV 898 (1520)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~~~~a~~~V~y~GqpVaaVvAet~~~A~~Aa~lV~Ve 898 (1520)
...|+|+|+++||.|+||||.+|+|+|.++|++|+.+.+|+
T Consensus 95 ---------------------------------------~~hddpl~a~gkVef~GQ~vfaV~A~s~e~ARraA~~a~ie 135 (781)
T COG4631 95 ---------------------------------------VKHDDPLLADGKVEFHGQPVFAVIAESREAARRAARLAKIE 135 (781)
T ss_pred ---------------------------------------ccCCCccccCceEEEccceEEEEeehhHHHHHHHHHhhhcc
Confidence 24789999999999999999999999999999999999999
Q ss_pred EeeCCCCCCCHHHHhhcCCccchhhhhccCCCccccCCCCCchhhHHHHhhcccceEEEEEEEECccccCCCCCCeeEEE
Q psy7003 899 YSDVKTPKLDIKQIVQDGDKARIVEMFKLEPTATKSKFSPDSNARWEILEAGKKLFKIKGAAEFGPQYHYTMEGQTALCV 978 (1520)
Q Consensus 899 Ye~l~~~v~di~~Al~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~vveg~~~~~~q~H~~mEp~~a~A~ 978 (1520)
||++| +++|+.+|++.+.. +.+....++||.+. +|+.+. +.++|++++++|+|||+|+|.++|+
T Consensus 136 Ye~lp-~~~di~~a~a~~~~--v~~p~~l~rGD~~a-----------~~~~Ap--~r~~G~~~iGGQehFYLEgqia~a~ 199 (781)
T COG4631 136 YEDLP-PVTDIDEAIAAGRL--VTPPLTLKRGDAAA-----------ALAAAP--HRLQGEMRIGGQEHFYLEGQIALAV 199 (781)
T ss_pred cccCC-ccCCHHHHhhcccc--cCCchhhcccchhh-----------hhhhCc--hhheeeEEEcCeeeEEEeeeeeEec
Confidence 99998 69999999988742 33344567887643 488999 9999999999999999999999999
Q ss_pred EeCC-eEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCCCCCCCchHHHHHHHHHHhcCCcEEEEcChHHHH
Q psy7003 979 PSED-GVDIYAASQWVTLVQESVAGVLGLPNNRVNVKTRRIGGGYGAKLSRSCYPAVIAAVCSNVINKPVRIVMSIESMM 1057 (1520)
Q Consensus 979 ~~ed-~l~V~~sTQ~p~~vq~~vA~~LGlp~~kVrV~~~~vGGgFG~K~~~~~~~~~~AAlaA~~~gRPVrl~~sRee~m 1057 (1520)
|.|| +++||+|||.|..+|..+|++||+|.|.|.|.++|+|||||||.+....+++.||++|+|++||||+..+|+|||
T Consensus 200 p~Ed~~v~v~~STQhPtE~Q~~vahvLGvpsn~VtV~~rRMGGGFGGKEtQ~~~fAa~aA~aA~k~~r~vk~RpdRdeDm 279 (781)
T COG4631 200 PGEDGDVTVWSSTQHPTEVQHLVAHVLGVPSNAVTVEVRRMGGGFGGKETQANQFAALAALAAKKTGRPVKIRPDRDEDM 279 (781)
T ss_pred cCCCCCEEEEecCCCcHHHHHHHHHHhCCCcceEEEEEEeecCCcCcccccchHHHHHHHHHHHHhCCceeecCCcchhh
Confidence 9977 599999999999999999999999999999999999999999999888889999999999999999999999999
Q ss_pred hccCCCCcEEEEEeeeccCCCccccccCCCccchhhhhhhhccceeeeccccccccccCcchhhhhccccceeeeeeccc
Q psy7003 1058 GALGGRYPVYATYEIGTIGGNLSIKHEHPEFSSDVFLLLEVVGATITIRDTFGLEQTVSPEEYLSIDMNKKVITYITFCP 1137 (1520)
Q Consensus 1058 ~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1137 (1520)
.++||||+|...|
T Consensus 280 ~~TGKRHdF~v~y------------------------------------------------------------------- 292 (781)
T COG4631 280 TATGKRHDFHVDY------------------------------------------------------------------- 292 (781)
T ss_pred hhccCcCceEEEe-------------------------------------------------------------------
Confidence 9999999999988
Q ss_pred ccccccccccceeeeCCCCcEEEEEEEEEEecCCCcccchhhhHhhcccCCCCCCCCceEEEEEEEecCCCCCcccCCCC
Q psy7003 1138 LIKNSYYLRTYKCGVDKNGVIQNLSTVFNVDKGMTLNENGFLHVRFGLGQASIYDPSTFRVVANAVRTDKPTYGFTRSPG 1217 (1520)
Q Consensus 1138 ~~~~~~~~~~~k~g~d~dG~i~al~~~~~~d~Ga~~~~~~~~~~~~~~~~~~~Y~ipn~r~~~~~v~TN~p~~ga~Rg~G 1217 (1520)
++|||+||+|.+++..+.+++|.+.+.|+++..++++|.+|+|.+|++.+.+..++||+.++++|||||
T Consensus 293 -----------~vGfDdeGri~~v~~~~aarcGfS~DLSgpV~dRAlfH~DNaYf~p~v~~~s~~~kTntvSnTAfRGFG 361 (781)
T COG4631 293 -----------EVGFDDEGRILGVDATLAARCGFSADLSGPVTDRALFHADNAYFYPHVHILSRPLKTNTVSNTAFRGFG 361 (781)
T ss_pred -----------eeccCCCCcEEEeeeehhhccCcccccCccchhhheeccccceeccceeeecceeeccccccccccccC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHhCCCHHHHHHHhcCC---------------chHHHHHHHHHhccChHHHHHHHHHHhhhhhh
Q psy7003 1218 ACEVTAFIEHVMDHIATVVNRDPTDVRIANLRN---------------EDVKKFYQQFRGSVKYKERRDAIETFNAVRVL 1282 (1520)
Q Consensus 1218 ~~q~~fa~E~~mD~iA~~lg~DP~e~R~~Nl~~---------------~~~~~~~~~~~~~~~~~~r~~~~~~~n~~~~~ 1282 (1520)
.||+++++|.+||++|..||+||+|+|++|++. +-+.++++++..+++|..|++++..||+
T Consensus 362 GPQGm~~~Eriid~vA~alGkdpleiRk~NfYg~~~~n~TpYhQ~Vednii~ri~~ELeaSsdyaaRr~~i~aFNa---- 437 (781)
T COG4631 362 GPQGMLGIERIIDEVAYALGKDPLEIRKLNFYGKDGRNVTPYHQTVEDNIIARIVDELEASSDYAARREAIRAFNA---- 437 (781)
T ss_pred CcchhhHHHHHHHHHHHHhCCCHHHHHhhhccCCCCCccCccccchHHhHHHHHHHHHHhcchHHHHHHHHHHhhc----
Confidence 999999999999999999999999999999993 1367899999999999999999999998
Q ss_pred hhhhhhhhhhccCCccccccceEEEEeccCC----CCcceEEEEEEcCCCeEEEEecCcccCcchHHHHHHHHHHHhCCC
Q psy7003 1283 ISQYSLRHCFQNNRWRKRGISAVVTLFPLGF----YDVSYAILSVFRRDATVAITTSGIEIGQGLHTKVAQACAYELGIP 1358 (1520)
Q Consensus 1283 ~~~~~~~~~~~~~~~~krGig~~~~~~~~g~----~~~~~a~v~v~~~DGsV~i~~g~~e~GQG~~T~~aQiaA~~Lgip 1358 (1520)
..+..||||++.|.+|+++| ++|++|+|+||+ ||||.+.|||+|||||++||++||+|++|+|+
T Consensus 438 -----------~spv~krGlAlTPVKFGISFt~t~~NQAGALVHvY~-DGSi~lNHGGTEMGQGL~tKvaQVvA~~fqvd 505 (781)
T COG4631 438 -----------ASPVIKRGLALTPVKFGISFTATHYNQAGALVHVYT-DGSIHLNHGGTEMGQGLYTKVAQVVAEEFQVD 505 (781)
T ss_pred -----------cChhhhccccccceeeeEEEeeeeeccCceEEEEec-cCeEEEcCCCcccccchhHHHHHHHHHHhCcc
Confidence 77888999999999999987 589999999996 99999999999999999999999999999999
Q ss_pred CCcEEEecCCCCCCCCCCCCcccccccchHHHHHHHHHHHHHHhhhhhhc---------------------CCCHHHHHH
Q psy7003 1359 IEKIVLKPAQNNIFPNAANTGGSTASDNAARCILLCCQELKTRLMPYMDK---------------------GKSWEKTIS 1417 (1520)
Q Consensus 1359 ~e~I~v~~~dT~~~p~~~~t~gS~~t~~~g~Av~~Ac~~l~~rl~~~~~~---------------------~~~w~~~~~ 1417 (1520)
+++|+|..++|+.+||.+.|++|+|++++|+|+++||+++|+||-.+++. ...++++++
T Consensus 506 ~~rVkitaT~T~KVpNTSaTAASSGsDLNGmAa~dAa~qIk~RLv~fAA~~~~V~~~~v~F~~n~vrig~~~~~F~~lv~ 585 (781)
T COG4631 506 IDRVKITATTTDKVPNTSATAASSGSDLNGMAAQDAARQIKERLVAFAAEHWGVPEEDVAFLPNRVRIGGQELAFADLVK 585 (781)
T ss_pred cceEEEeccccCCCCCCccccccccCCcccHHHHHHHHHHHHHHHHHHHHhcCCCHHHeEecCCeeEEcceecCHHHHHH
Confidence 99999999999999999999999999999999999999999999998764 468999999
Q ss_pred HHhhcCceeEEEEEeeccC-------CCCCCCccccceEEEEEEEEECCCCcEEEEEEEEEEecCcccChHHHhHHhHhH
Q psy7003 1418 DAFERGVDLQVTKSVSSQQ-------TPDLLPMYTIPTAAATEVEVDLLTGQHQILRVDILEDTGQSINPAIDIGQIQGA 1490 (1520)
Q Consensus 1418 ~a~~~gv~l~~~~~~~~~~-------~~~~~~~~~~~ga~~aEVEVD~~TG~v~V~r~~~~~D~G~~INP~~~~GQIeGg 1490 (1520)
+||..++.|++.++|.+++ ..+.+|.||+|||+|+||+||++||+.+++|.|++||+|++|||+++.||||||
T Consensus 586 ~AY~arvqLsaaGFY~TPkihwdra~~~G~PFyYFaYGAacSEV~vDtlTGey~~~R~DiLHDvG~SLNpaiDlGQiEGg 665 (781)
T COG4631 586 QAYFARVQLSAAGFYKTPKIHWDRAAGRGRPFYYFAYGAACSEVSVDTLTGEYKVERTDILHDVGRSLNPAIDLGQIEGG 665 (781)
T ss_pred HHhheeeeeeccccccCCccccchhhcCCCceEEEeecceeeeEEEecccceEEEEeehhhhhhhhhcccccccccccch
Confidence 9999999999999997632 345689999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHccceeeeCCCceeecCCC
Q psy7003 1491 FIMGIGLWTFEHQIHDKRTGALLTNRT 1517 (1520)
Q Consensus 1491 ~vqGiG~aL~Ee~~~d~~~G~llt~~~ 1517 (1520)
|+||+||.++||+.||+ .|+|.|..+
T Consensus 666 FvQGmGWLTtEeL~wd~-kGRlrThap 691 (781)
T COG4631 666 FVQGMGWLTTEELWWDE-KGRLRTHAP 691 (781)
T ss_pred hcccccccchhhheecc-CCCeeecCC
Confidence 99999999999999994 799998764
No 9
>TIGR02965 xanthine_xdhB xanthine dehydrogenase, molybdopterin binding subunit. Members of the protein family are the molybdopterin-containing large subunit (or, in, eukaryotes, the molybdopterin-binding domain) of xanthine dehydrogenase, and enzyme that reduces the purine pool by catabolizing xanthine to urate. This model is based primarily on bacterial sequences; it does not manage to include all eukaryotic xanthine dehydrogenases and thereby discriminate them from the closely related enzyme aldehyde dehydrogenase.
Probab=100.00 E-value=1.5e-127 Score=1222.85 Aligned_cols=628 Identities=31% Similarity=0.477 Sum_probs=564.5
Q ss_pred CCCCCCccchhhhcccccccccCCCCCCCcEEEEEEecCCCCeEeecCCchhhhcCCCEEEEEeccCCCCCCCCCCCCCC
Q psy7003 742 LTKPLPKIDAITQCAGEAEYVNDLPQLSEEYFASVVLADRGPAKIQSIDSTLALAYPGVHTFVHAKDIPGKNLAIPAAWP 821 (1520)
Q Consensus 742 iGk~~~r~da~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~ahA~I~sID~s~A~a~PGV~avvt~~Dipg~n~~~~~~~~ 821 (1520)
+||+++|+|+..|+||+++|++|+..+|||||+++||||++||+|++||+++|++||||++|+|++|+|+.|.+
T Consensus 1 ~G~~~~R~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~aha~I~~iD~s~A~~~pGV~~V~t~~D~p~~~~~------ 74 (758)
T TIGR02965 1 VGTSLKHESAHKHVAGTAVYIDDIPEPAGTLHAALGLSTRAHARITSMDLSAVRAAPGVVDVLTAADIPGENDI------ 74 (758)
T ss_pred CCCCccCcchHhhCceeeEcccCCCCCCCCEEEEEEecCCCceEEeecchHHHhcCCCcEEEEEHHHCCCCCCC------
Confidence 69999999999999999999999943799999999999999999999999999999999999999999865432
Q ss_pred CcccccccCCCCcccccccccCCCCCCCCCCCCCCCCcccccccccCeeeecCCEEEEEEECCHHHHHHHcccceEEEee
Q psy7003 822 GQIFEDEKAYPGVHTFVHAKDIPGKNLAIPAAWPGQIFEDEKLFAENEVEFAGQIIGAIIADNFKSAYEAAKMVKVVYSD 901 (1520)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~~~~a~~~V~y~GqpVaaVvAet~~~A~~Aa~lV~VeYe~ 901 (1520)
|....++|+||.++|+|+|||||+|||+|+++|++|+++|+|+||+
T Consensus 75 ----------------------------------g~~~~~~~~la~~~Vry~Ge~va~VvA~~~~~A~~A~~~i~V~ye~ 120 (758)
T TIGR02965 75 ----------------------------------SPIIHDDPLLADGKVEFVGQPIFAVIATSRDAARRAARLAKIEYEE 120 (758)
T ss_pred ----------------------------------CCCCCCceeccCCEEEEcCCeEEEEEECCHHHHHHHhhccEEEEEc
Confidence 1113478999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHhhcCCccchhhhhccCCCccccCCCCCchhhHHHHhhcccceEEEEEEEECccccCCCCCCeeEEEEeC
Q psy7003 902 VKTPKLDIKQIVQDGDKARIVEMFKLEPTATKSKFSPDSNARWEILEAGKKLFKIKGAAEFGPQYHYTMEGQTALCVPSE 981 (1520)
Q Consensus 902 l~~~v~di~~Al~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~vveg~~~~~~q~H~~mEp~~a~A~~~e 981 (1520)
+| +++|+++|++++++ .+++......||+ +++|++++ ++||++|++++|+|+||||++|+|.|++
T Consensus 121 lp-~v~d~~~Al~~~a~-~~~~~~~~~~Gd~-----------~~af~~a~--~vve~~y~~~~~~h~~mEp~~~vA~~~~ 185 (758)
T TIGR02965 121 LP-AVLDIEEALAAGSR-FVTPPLTLERGDA-----------EAALAAAP--HRLSGEMRIGGQEHFYLEGQIALAVPGE 185 (758)
T ss_pred CC-ccCCHHHHhcCCCC-cccCcccccCCCH-----------HHHHhhCC--EEEEEEEEECCEeEEecCCceEEEEEcC
Confidence 98 69999999988763 3343222344554 34689999 9999999999999999999999999984
Q ss_pred -CeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCCCCCCCchHHHHHHHHHHhcCCcEEEEcChHHHHhcc
Q psy7003 982 -DGVDIYAASQWVTLVQESVAGVLGLPNNRVNVKTRRIGGGYGAKLSRSCYPAVIAAVCSNVINKPVRIVMSIESMMGAL 1060 (1520)
Q Consensus 982 -d~l~V~~sTQ~p~~vq~~vA~~LGlp~~kVrV~~~~vGGgFG~K~~~~~~~~~~AAlaA~~~gRPVrl~~sRee~m~~~ 1060 (1520)
++|+||+|||+|+.+|..+|++||||.+||||+++++|||||+|...+.+.++.||++|+++||||||+|||+|+|...
T Consensus 186 ~g~l~v~~stQ~p~~~r~~lA~~Lglp~~~VrV~~~~vGGgFG~K~~~~~~~~~~aa~~A~~~grPVk~~~sR~E~~~~~ 265 (758)
T TIGR02965 186 DGGMHVWSSTQHPSEVQHLVAHVLGVPSHAVTVEVRRMGGGFGGKETQANLFACLAAVAARKTGRPVKLRPDRDDDMMIT 265 (758)
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCChHHEEEEeCCCccCccccccccchHHHHHHHHHHHHCCCEEEEechHHhhhhc
Confidence 5799999999999999999999999999999999999999999998654446789999999999999999999999999
Q ss_pred CCCCcEEEEEeeeccCCCccccccCCCccchhhhhhhhccceeeeccccccccccCcchhhhhccccceeeeeecccccc
Q psy7003 1061 GGRYPVYATYEIGTIGGNLSIKHEHPEFSSDVFLLLEVVGATITIRDTFGLEQTVSPEEYLSIDMNKKVITYITFCPLIK 1140 (1520)
Q Consensus 1061 ~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1140 (1520)
++||++.+++
T Consensus 266 ~~r~~~~~~~---------------------------------------------------------------------- 275 (758)
T TIGR02965 266 GKRHDFLVDY---------------------------------------------------------------------- 275 (758)
T ss_pred cCccceEEEE----------------------------------------------------------------------
Confidence 9999999888
Q ss_pred cccccccceeeeCCCCcEEEEEEEEEEecCCCcccchhhhHhhcccCCCCCCCCceEEEEEEEecCCCCCcccCCCCchh
Q psy7003 1141 NSYYLRTYKCGVDKNGVIQNLSTVFNVDKGMTLNENGFLHVRFGLGQASIYDPSTFRVVANAVRTDKPTYGFTRSPGACE 1220 (1520)
Q Consensus 1141 ~~~~~~~~k~g~d~dG~i~al~~~~~~d~Ga~~~~~~~~~~~~~~~~~~~Y~ipn~r~~~~~v~TN~p~~ga~Rg~G~~q 1220 (1520)
|+|+|+||+|++++++++.|+|+|.+.+..+..+......++|+|||++++++.|+||++++|+|||||.+|
T Consensus 276 --------~~g~~~dG~i~a~~~~~~~d~Gay~~~~~~~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q 347 (758)
T TIGR02965 276 --------DVGFDDEGRILGVDIDMAARCGFSADLSGPVTDRALFHADNAYFLPDVTITSHPLKTNTQSNTAFRGFGGPQ 347 (758)
T ss_pred --------EEEECCCCCEEEEEEEEeecCcccCCcchHHHHHHHHhcCCcccCCceEEEEEEEEcCCCCCccccCCChHH
Confidence 999999999999999999999999765544445555457899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHhcCC---------------chHHHHHHHHHhccChHHHHHHHHHHhhhhhhhhh
Q psy7003 1221 VTAFIEHVMDHIATVVNRDPTDVRIANLRN---------------EDVKKFYQQFRGSVKYKERRDAIETFNAVRVLISQ 1285 (1520)
Q Consensus 1221 ~~fa~E~~mD~iA~~lg~DP~e~R~~Nl~~---------------~~~~~~~~~~~~~~~~~~r~~~~~~~n~~~~~~~~ 1285 (1520)
+.|++|++||++|++|||||+|||++|++. .++++||+++++.++|++|+++.+.||+
T Consensus 348 ~~fa~E~~mD~~A~~lg~DP~e~R~~Nl~~~g~~~~~~~g~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~------- 420 (758)
T TIGR02965 348 GMVAIERIMDEVARALGKDPLEVRKRNFYGKDERNVTPYHQTVEDNIIHEIIEELEESSDYAARRAAIRAFNA------- 420 (758)
T ss_pred HHHHHHHHHHHHHHHhCcCHHHHHHHcCCCCCCCCcCCCceeccCCcHHHHHHHHHHhCCHHHHHHHHHHHHh-------
Confidence 999999999999999999999999999972 2488999999999999999888877876
Q ss_pred hhhhhhhccCCccccccceEEEEeccCCC----CcceEEEEEEcCCCeEEEEecCcccCcchHHHHHHHHHHHhCCCCCc
Q psy7003 1286 YSLRHCFQNNRWRKRGISAVVTLFPLGFY----DVSYAILSVFRRDATVAITTSGIEIGQGLHTKVAQACAYELGIPIEK 1361 (1520)
Q Consensus 1286 ~~~~~~~~~~~~~krGig~~~~~~~~g~~----~~~~a~v~v~~~DGsV~i~~g~~e~GQG~~T~~aQiaA~~Lgip~e~ 1361 (1520)
.++|++||+|+++..++.+++ +++.+.|+| ++||+|+|.+|..|||||++|+++||+|++||||+|+
T Consensus 421 --------~~~~~~rGiG~a~~~~g~~~~~~~~~~~~a~v~i-~~dG~v~v~~g~~e~GQG~~T~laQIaAe~LGi~~d~ 491 (758)
T TIGR02965 421 --------ASPVLKKGIALTPVKFGISFTVTHLNQAGALVHV-YTDGSIHLNHGGTEMGQGLNTKVAQVVAEEFQVDIDR 491 (758)
T ss_pred --------cCCCceeEEEEeeeeccccccccccCccceEEEE-eCCCcEEEEECCCCCCCCHHHHHHHHHHHHhCCCHHH
Confidence 688999999999998887653 367889996 6799999999999999999999999999999999999
Q ss_pred EEEecCCCCCCCCCCCCcccccccchHHHHHHHHHHHHHHhhhhhhc---------------------CCCHHHHHHHHh
Q psy7003 1362 IVLKPAQNNIFPNAANTGGSTASDNAARCILLCCQELKTRLMPYMDK---------------------GKSWEKTISDAF 1420 (1520)
Q Consensus 1362 I~v~~~dT~~~p~~~~t~gS~~t~~~g~Av~~Ac~~l~~rl~~~~~~---------------------~~~w~~~~~~a~ 1420 (1520)
|+|..+||+.+|++++|+|||++.+.|.|+++||++||+||++++++ ..+|.+++..++
T Consensus 492 V~v~~~DT~~~p~~~gT~gSr~t~~~g~Av~~Aa~~lr~~l~~~Aa~~l~~~~~~l~~~~g~v~~~~~~~~~~~l~~~a~ 571 (758)
T TIGR02965 492 VKITATDTDKVPNTSATAASSGSDLNGMAAQDAARQIKERLVAFAAEKWQVPAEDVRFAPNHVRVGEQRVPFAELVQQAY 571 (758)
T ss_pred EEEEecCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHEEEECCEEEeCCCccCHHHHHHHHh
Confidence 99999999999999999999999999999999999999999887543 367999988887
Q ss_pred hcCceeEEEEEeeccCCC-------CCCCccccceEEEEEEEEECCCCcEEEEEEEEEEecCcccChHHHhHHhHhHHHH
Q psy7003 1421 ERGVDLQVTKSVSSQQTP-------DLLPMYTIPTAAATEVEVDLLTGQHQILRVDILEDTGQSINPAIDIGQIQGAFIM 1493 (1520)
Q Consensus 1421 ~~gv~l~~~~~~~~~~~~-------~~~~~~~~~ga~~aEVEVD~~TG~v~V~r~~~~~D~G~~INP~~~~GQIeGg~vq 1493 (1520)
..+..|.+++.|...... +.++.+++||++++|||||++||+++|+|+++++|||++|||.+++||||||++|
T Consensus 572 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ga~~~eVeVD~~TG~v~v~~~~~~~D~G~~iNP~~~~GQi~Gg~~q 651 (758)
T TIGR02965 572 FARVQLSSTGFYKTPKIHWDRAKGRGRPFYYFAYGAACSEVSVDTLTGEYKVLRADILHDVGRSLNPAIDIGQVEGGFVQ 651 (758)
T ss_pred hcCCCcEEEEEEcCCCccccccccCCCCcceeeeeEEEEEEEEecCCCcEEEEEEEEEEecCCcCCHHHhhhhhhhhhhh
Confidence 666678888887421100 0122267899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHccceeeeCCCceeecCCCCC
Q psy7003 1494 GIGLWTFEHQIHDKRTGALLTNRTWV 1519 (1520)
Q Consensus 1494 GiG~aL~Ee~~~d~~~G~llt~~~w~ 1519 (1520)
|||++|+|++.||+ +|+++|++.|.
T Consensus 652 GiG~aL~E~~~~d~-~G~~l~~~~~d 676 (758)
T TIGR02965 652 GMGWLTTEELVWDE-KGRLRTHAPST 676 (758)
T ss_pred hhhHhhccceEECC-CcCCcCCCCcC
Confidence 99999999999995 69999999885
No 10
>PRK09970 xanthine dehydrogenase subunit XdhA; Provisional
Probab=100.00 E-value=3.5e-123 Score=1183.81 Aligned_cols=635 Identities=23% Similarity=0.329 Sum_probs=549.9
Q ss_pred CCCCCCCccchhhhcccccccccCCCCCCCcEEEEEEecCCCCeEeecCCchhhhcCCCEEEEEeccCCCCCCCCCCCCC
Q psy7003 741 PLTKPLPKIDAITQCAGEAEYVNDLPQLSEEYFASVVLADRGPAKIQSIDSTLALAYPGVHTFVHAKDIPGKNLAIPAAW 820 (1520)
Q Consensus 741 ~iGk~~~r~da~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~ahA~I~sID~s~A~a~PGV~avvt~~Dipg~n~~~~~~~ 820 (1520)
.|||+++|+|+..||||+++|++|+ .+|||||++++|||++||+|+|||+++|++||||++|+|++|+|+.|. ....
T Consensus 2 ~vG~~~~r~d~~~kvtG~~~Y~~D~-~~~gmL~a~~~rSp~aharI~siD~~~A~~~pGV~~Vvt~~D~p~~~~-~~~~- 78 (759)
T PRK09970 2 AIGKSIMRVDAIAKVTGRAKYTDDY-VMAGMLYAKYVRSPIAHGKVKSIDTEEARSLPGVEAVFTWEDVPDIPF-PTAG- 78 (759)
T ss_pred CCCCCCcCcchHHhCcCCccccccC-CCCCCEEEEEEcCCCceEEEeeeeHHHHHhCCCcEEEEeHHHcCCccc-cccc-
Confidence 4899999999999999999999999 799999999999999999999999999999999999999999996442 1100
Q ss_pred CCcccccccCCCCcccccccccCCCCCCCCCCCCCCCCcccccccccCeeeecCCEEEEEEECCHHHHHHHcccceEEEe
Q psy7003 821 PGQIFEDEKAYPGVHTFVHAKDIPGKNLAIPAAWPGQIFEDEKLFAENEVEFAGQIIGAIIADNFKSAYEAAKMVKVVYS 900 (1520)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~~~~a~~~V~y~GqpVaaVvAet~~~A~~Aa~lV~VeYe 900 (1520)
..+ + +...+ ...|+++|++++|+|+|||||+|+|+|+++|++|+++|+|+||
T Consensus 79 --~~~--------------------~----~~~~~--~~~~~~~la~~~Vr~~G~~VAaVvA~~~~~A~~A~~~i~Veye 130 (759)
T PRK09970 79 --HPW--------------------S----LDPNH--RDIADRALLTRHVRHHGDAVAAVVARDELTAEKALKLIKVEYE 130 (759)
T ss_pred --ccc--------------------C----CCCCC--CCCCCccCcCCEEEEcCCeEEEEEeCCHHHHHHHhCCCcEeEE
Confidence 000 0 00000 0247899999999999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHhhcCCccchhhhhccCCCccccCCCCCchhhHHHHhhcccceEEEEEEEECccccCCCCCCeeEEEEe
Q psy7003 901 DVKTPKLDIKQIVQDGDKARIVEMFKLEPTATKSKFSPDSNARWEILEAGKKLFKIKGAAEFGPQYHYTMEGQTALCVPS 980 (1520)
Q Consensus 901 ~l~~~v~di~~Al~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~vveg~~~~~~q~H~~mEp~~a~A~~~ 980 (1520)
++| +++|+++|++++++ .+|+.. +++.....-..++.+++|++++ ++||++|++++|+|+||||++|+|+|+
T Consensus 131 ~lp-~v~~~~~Al~~~a~-~ih~~~----~ni~~~~~~~~Gd~~~a~~~a~--~vve~~y~~~~~~h~~mEp~~~iA~~~ 202 (759)
T PRK09970 131 ELP-VITDPEAALAEGAP-PIHNGR----GNLLKQSTMSTGNVQQTIKAAD--YQVQGHYETPIVQHCHMENVTSYAYME 202 (759)
T ss_pred eCC-ccCCHHHHhCCCCC-ccCCCC----CceeeeeeeccCChhHhhccCC--EEEEEEEEECCEeEeccCCceEEEEEC
Confidence 998 79999999988763 344321 1110000000122345789999 999999999999999999999999998
Q ss_pred C-CeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCCCCCCCchHHHHHHHHHHhc-CCcEEEEcChHHHHh
Q psy7003 981 E-DGVDIYAASQWVTLVQESVAGVLGLPNNRVNVKTRRIGGGYGAKLSRSCYPAVIAAVCSNVI-NKPVRIVMSIESMMG 1058 (1520)
Q Consensus 981 e-d~l~V~~sTQ~p~~vq~~vA~~LGlp~~kVrV~~~~vGGgFG~K~~~~~~~~~~AAlaA~~~-gRPVrl~~sRee~m~ 1058 (1520)
+ |+++||+|||+|+.+|..+|++||||.+||||+++++|||||+|.+... ...||++|+++ ||||||+|||+|+|.
T Consensus 203 ~~g~l~v~~stQ~p~~~~~~ia~~Lglp~~~VrV~~~~vGGgFG~K~~~~~--~~~aa~la~~~~grPVk~~~~R~E~~~ 280 (759)
T PRK09970 203 DDGRITIVSSTQIPHIVRRVVGQALGIPWGKVRVIKPYVGGGFGNKQDVLE--EPLAAFLTSKVGGRPVKVSLSREECFL 280 (759)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCCHHHEEEEeCCCCCCcCcccccCH--HHHHHHHHHHhcCCCeEEeechhHhhh
Confidence 5 5799999999999999999999999999999999999999999987543 45677888888 999999999999999
Q ss_pred ccCCCCcEEEEEeeeccCCCccccccCCCccchhhhhhhhccceeeeccccccccccCcchhhhhccccceeeeeecccc
Q psy7003 1059 ALGGRYPVYATYEIGTIGGNLSIKHEHPEFSSDVFLLLEVVGATITIRDTFGLEQTVSPEEYLSIDMNKKVITYITFCPL 1138 (1520)
Q Consensus 1059 ~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1138 (1520)
.+++||++.++|
T Consensus 281 ~~~~r~~~~~~~-------------------------------------------------------------------- 292 (759)
T PRK09970 281 ATRTRHAFTIDI-------------------------------------------------------------------- 292 (759)
T ss_pred cCCCCCceEEEE--------------------------------------------------------------------
Confidence 999999999888
Q ss_pred cccccccccceeeeCCCCcEEEEEEEEEEecCCCcccchhhhHhhcccCCCCCCCCceEEEEEEEecCCCCCcccCCCCc
Q psy7003 1139 IKNSYYLRTYKCGVDKNGVIQNLSTVFNVDKGMTLNENGFLHVRFGLGQASIYDPSTFRVVANAVRTDKPTYGFTRSPGA 1218 (1520)
Q Consensus 1139 ~~~~~~~~~~k~g~d~dG~i~al~~~~~~d~Ga~~~~~~~~~~~~~~~~~~~Y~ipn~r~~~~~v~TN~p~~ga~Rg~G~ 1218 (1520)
|+|+|+||+|++++++++.|+|+|.+.+..+.........++|+|||++++++.|+||++++|+|||||.
T Consensus 293 ----------~~g~~~dG~i~a~~~~~~~d~Gay~~~~~~~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~ 362 (759)
T PRK09970 293 ----------KMGVNRDGTLKGYSLDVLSNTGAYASHGHSIASAGGNKVAYLYPRCAYKYSSKTVYTNLPSAGAMRGYGA 362 (759)
T ss_pred ----------EEEECCCCcEEEEEEEEeeccccCCCcchHHHHHHHhhcCCCccCceEEEEEEEEECCCCCCCCCCCCCh
Confidence 9999999999999999999999998876555555555688999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHhCCCHHHHHHHhcCC--------------chHHHHHHHHHhccChHHHHHHHHHHhhhhhhhh
Q psy7003 1219 CEVTAFIEHVMDHIATVVNRDPTDVRIANLRN--------------EDVKKFYQQFRGSVKYKERRDAIETFNAVRVLIS 1284 (1520)
Q Consensus 1219 ~q~~fa~E~~mD~iA~~lg~DP~e~R~~Nl~~--------------~~~~~~~~~~~~~~~~~~r~~~~~~~n~~~~~~~ 1284 (1520)
+|++|++|++||++|++|||||+|||++|+.. .+++++|+++++.++|++|++..+ +
T Consensus 363 ~q~~fa~E~~mD~~A~~lg~DP~e~R~~N~~~~g~~~~~~g~~~~s~~~~~~l~~~~~~~~~~~~~~~~~---~------ 433 (759)
T PRK09970 363 PQVVFAVESMLDDAATALGIDPVEFRLRNAAREGDANPLSGKRIYSAGLPECLEKGRKIFEWDKRRAECK---N------ 433 (759)
T ss_pred hHHHHHHHHHHHHHHHHhCcCHHHHHHHhCCCCCCcCCCCCeeecCCCHHHHHHHHHHhcCchhhhHhHh---h------
Confidence 99999999999999999999999999999972 358999999999999998765432 1
Q ss_pred hhhhhhhhccCCccccccceEEEEeccCCC----CcceEEEEEEcCCCeEEEEecCcccCcchHHHHHHHHHHHhCCCCC
Q psy7003 1285 QYSLRHCFQNNRWRKRGISAVVTLFPLGFY----DVSYAILSVFRRDATVAITTSGIEIGQGLHTKVAQACAYELGIPIE 1360 (1520)
Q Consensus 1285 ~~~~~~~~~~~~~~krGig~~~~~~~~g~~----~~~~a~v~v~~~DGsV~i~~g~~e~GQG~~T~~aQiaA~~Lgip~e 1360 (1520)
.+.|++||+|+++..++.++. +++++.|+| ++||+|+|.+|++|||||+.|+++||+|++||||++
T Consensus 434 ---------~~~~~~rGiG~a~~~~~~~~~~~~~~~~~a~v~i-~~dGsv~v~~g~~e~GQG~~T~~aQiaAe~LGi~~~ 503 (759)
T PRK09970 434 ---------QQGNLRRGVGVACFSYTSGTWPVGLEIAGARLLM-NQDGTVQVQSGATEIGQGSDTVFSQMVAETVGIPVS 503 (759)
T ss_pred ---------hcCCceEEEEEEEEEEeecCCCCCCCcceEEEEE-ccCceEEEEECCCCcCCCHHHHHHHHHHHHhCCCHH
Confidence 234678999999988877643 368899997 689999999999999999999999999999999999
Q ss_pred cEEEecC-CCCCCCCCCCCcccccccchHHHHHHHHHHHHHHhhhhhhc------------------------CCCHHHH
Q psy7003 1361 KIVLKPA-QNNIFPNAANTGGSTASDNAARCILLCCQELKTRLMPYMDK------------------------GKSWEKT 1415 (1520)
Q Consensus 1361 ~I~v~~~-dT~~~p~~~~t~gS~~t~~~g~Av~~Ac~~l~~rl~~~~~~------------------------~~~w~~~ 1415 (1520)
+|+|..+ ||+.+|++++|+|||++.++|.|+++||++||+||++++++ ..+|.++
T Consensus 504 ~V~v~~~~dT~~~p~~~gt~aSr~t~~~g~Av~~Aa~~lr~~l~~~aa~~l~~~~~~l~~~~G~v~~~~~~~~~~~~~~l 583 (759)
T PRK09970 504 DVRVISTQDTDVTPFDPGAYASRQSYVAGPAIRKAALELKEKILAHAAVMLHQSAMNLDIIDGHIVVKRPGEPLMSLEEL 583 (759)
T ss_pred hEEEEccCCCCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHEEEECCEEEECCCCCccccHHHH
Confidence 9999988 99999999999999999999999999999999999886432 2678888
Q ss_pred HHHHhhc---CceeEEEEEeeccCCCCCCCccccceEEEEEEEEECCCCcEEEEEEEEEEecCcccChHHHhHHhHhHHH
Q psy7003 1416 ISDAFER---GVDLQVTKSVSSQQTPDLLPMYTIPTAAATEVEVDLLTGQHQILRVDILEDTGQSINPAIDIGQIQGAFI 1492 (1520)
Q Consensus 1416 ~~~a~~~---gv~l~~~~~~~~~~~~~~~~~~~~~ga~~aEVEVD~~TG~v~V~r~~~~~D~G~~INP~~~~GQIeGg~v 1492 (1520)
+..++.. +..+.+...|. +. ..+++|+|+++|||||++||+++|+|+++++|||++|||.+++||||||++
T Consensus 584 a~~a~~~~~~~~~~~~~~~~~----~~--~~~~~~~a~~aeVeVD~~TG~v~v~~~~~~~D~G~~iNP~~v~gQi~Gg~~ 657 (759)
T PRK09970 584 AMDAYYHPERGGQITAESSIK----TT--TNPPAFGCTFVDVEVDIALCKVTINRILNVHDSGHILNPLLAEGQVHGGMG 657 (759)
T ss_pred HHHhhccccCCCceeEEEEec----CC--CCCCceEEEEEEEEEeCCCCeEEEEEEEEEEEcCcccCHHHHHHHHHhHHH
Confidence 8777653 34566676663 11 125689999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHccceeeeCCCceeecCCCCC
Q psy7003 1493 MGIGLWTFEHQIHDKRTGALLTNRTWV 1519 (1520)
Q Consensus 1493 qGiG~aL~Ee~~~d~~~G~llt~~~w~ 1519 (1520)
||||++|+|++.||+++|+++|+|.|.
T Consensus 658 qGiG~aL~E~~~~d~~~G~~~~~~~~d 684 (759)
T PRK09970 658 MGIGWALFEEMIIDEKTGVVRNPNLLD 684 (759)
T ss_pred HHHHHHhcceeEEcCCCCeECCCChhh
Confidence 999999999999996569999999774
No 11
>TIGR02416 CO_dehy_Mo_lg carbon-monoxide dehydrogenase, large subunit. This model represents the large subunits of group of carbon-monoxide dehydrogenases that include molybdenum as part of the enzymatic cofactor. There are various forms of carbon-monoxide dehydrogenase; Salicibacter pomeroyi DSS-3, for example, has two forms. Note that, at least in some species, the active site Cys is modified with a selenium attached to (rather than replacing) the sulfur atom. This is termed selanylcysteine, and created post-translationally, in contrast to selenocysteine incorporation during translation as for many other selenoproteins.
Probab=100.00 E-value=1.4e-122 Score=1178.96 Aligned_cols=626 Identities=22% Similarity=0.233 Sum_probs=538.6
Q ss_pred chhhhcccccccccCCCCCCCcEEEEEEecCCCCeEeecCCchhhhcCCCEEEEEeccCCCCCCCCCCCCCCCccccccc
Q psy7003 750 DAITQCAGEAEYVNDLPQLSEEYFASVVLADRGPAKIQSIDSTLALAYPGVHTFVHAKDIPGKNLAIPAAWPGQIFEDEK 829 (1520)
Q Consensus 750 da~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~ahA~I~sID~s~A~a~PGV~avvt~~Dipg~n~~~~~~~~~~~~~~~~ 829 (1520)
|+.++|||+++|++|+ .+|||||+++||||++||+|++||+++|++||||++|+|++|+|+.|....
T Consensus 1 e~~r~vtG~a~Y~~Di-~~pgmL~a~~vrSp~aha~I~~ID~s~A~~~pGV~~V~t~~D~p~~~~~~~------------ 67 (770)
T TIGR02416 1 EDIRFIQGKGNYVDDV-KLPGMLHGDIVRSPHAHARIKSIDTSAAKALPGVFAVLTAADLKPLNLHWM------------ 67 (770)
T ss_pred CCcccccccccccccC-CCCCCEEEEEEcCCCccEEEecccHHHHhhCCCcEEEEEHHHcCCccCCcC------------
Confidence 4678999999999999 799999999999999999999999999999999999999999986442100
Q ss_pred CCCCcccccccccCCCCCCCCCCCCCCCCcccccccccCeeeecCCEEEEEEECCHHHHHHHcccceEEEeeCCCCCCCH
Q psy7003 830 AYPGVHTFVHAKDIPGKNLAIPAAWPGQIFEDEKLFAENEVEFAGQIIGAIIADNFKSAYEAAKMVKVVYSDVKTPKLDI 909 (1520)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~~~~a~~~V~y~GqpVaaVvAet~~~A~~Aa~lV~VeYe~l~~~v~di 909 (1520)
+.....++|+||+++|+|+|||||+|||+|+++|++|+++|+|+||++| |++|+
T Consensus 68 -------------------------~~~~~~~~~~la~~~Vry~Ge~Va~VvA~t~~~A~~A~~~v~V~ye~lp-~v~d~ 121 (770)
T TIGR02416 68 -------------------------PTLAGDVQAVLADEKVLFQNQEVAFVVAKDRYVAADAIELVEVDYEPLP-VVIDP 121 (770)
T ss_pred -------------------------CCCCCCCcccCcCCEEEEcCCcEEEEEECCHHHHHHHhccceeeeecCC-ccCCH
Confidence 0000123789999999999999999999999999999999999999997 79999
Q ss_pred HHHhhcCCccchhhhhccC----CC-----cccc-CCCCCchhhHHHHhhcccceEEEEEEEECccccCCCCCCeeEEEE
Q psy7003 910 KQIVQDGDKARIVEMFKLE----PT-----ATKS-KFSPDSNARWEILEAGKKLFKIKGAAEFGPQYHYTMEGQTALCVP 979 (1520)
Q Consensus 910 ~~Al~~~~~~~i~~~~~~~----~g-----~~~~-~~~~~~~~~~~~~~~a~~~~vveg~~~~~~q~H~~mEp~~a~A~~ 979 (1520)
++|+++++ +.+|+..... .+ +... ...||.++.+++|++++ ++||++|++++|+|+||||++|+|.|
T Consensus 122 ~~A~~~~a-~~ih~~~~~~~~~~~~~~n~~~~~~~~~~gd~gd~~~af~~a~--~vve~~~~~~~~~h~~mEp~~~iA~~ 198 (770)
T TIGR02416 122 FKALEPDA-PVLREDLKGKTTGAHGARKHHNHIFRWEIGDKAATDAVFAKAE--VVVKQMMTYPRVHPSPLETCGCVASM 198 (770)
T ss_pred HHHhcCCC-ceecCCCCCccccccccccccceeeEEecCCccchhHHhccCC--EEEEEEEEeCceeeEcCCCCeEEEEE
Confidence 99998876 3455432110 00 0000 01234444567899999 99999999999999999999999999
Q ss_pred eC--CeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCCCCCCCchHHHHHHHHHHhcCCcEEEEcChHHHH
Q psy7003 980 SE--DGVDIYAASQWVTLVQESVAGVLGLPNNRVNVKTRRIGGGYGAKLSRSCYPAVIAAVCSNVINKPVRIVMSIESMM 1057 (1520)
Q Consensus 980 ~e--d~l~V~~sTQ~p~~vq~~vA~~LGlp~~kVrV~~~~vGGgFG~K~~~~~~~~~~AAlaA~~~gRPVrl~~sRee~m 1057 (1520)
++ ++|+||+|||+|+.+|..||++||||.+||||+++++|||||+|.....+. +.||++|+++||||||+|||+|+|
T Consensus 199 ~~~~g~l~v~~stQ~p~~~r~~vA~~Lglp~~~VrV~~~~vGGgFG~K~~~~~~~-~~aa~~A~~~gRPVk~~~sR~E~~ 277 (770)
T TIGR02416 199 DPIKGELTLWGTFQAPHVIRTVVSLISGLPEHKIRVISPDIGGGFGNKVGIYPGY-VCAIVASIVLGVPVKWVEDRMENL 277 (770)
T ss_pred eCCCCeEEEEECCCcHHHHHHHHHHHhCCCHHHEEEEcCCCCCCcccccccccHH-HHHHHHHHHhCCCEEEecchHHhh
Confidence 84 579999999999999999999999999999999999999999999865443 458899999999999999999999
Q ss_pred hccCCCCcEEEEEeeeccCCCccccccCCCccchhhhhhhhccceeeeccccccccccCcchhhhhccccceeeeeeccc
Q psy7003 1058 GALGGRYPVYATYEIGTIGGNLSIKHEHPEFSSDVFLLLEVVGATITIRDTFGLEQTVSPEEYLSIDMNKKVITYITFCP 1137 (1520)
Q Consensus 1058 ~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1137 (1520)
..+++||++.+++
T Consensus 278 ~~~~~r~~~~~~~------------------------------------------------------------------- 290 (770)
T TIGR02416 278 STTSFARDYHMTG------------------------------------------------------------------- 290 (770)
T ss_pred hcCCCCCceEEEE-------------------------------------------------------------------
Confidence 9999999999888
Q ss_pred ccccccccccceeeeCCCCcEEEEEEEEEEecCCCcccchhhhHhhcc--cCCCCCCCCceEEEEEEEecCCCCCc-ccC
Q psy7003 1138 LIKNSYYLRTYKCGVDKNGVIQNLSTVFNVDKGMTLNENGFLHVRFGL--GQASIYDPSTFRVVANAVRTDKPTYG-FTR 1214 (1520)
Q Consensus 1138 ~~~~~~~~~~~k~g~d~dG~i~al~~~~~~d~Ga~~~~~~~~~~~~~~--~~~~~Y~ipn~r~~~~~v~TN~p~~g-a~R 1214 (1520)
|+|+|+||+|++++++++.|+|+|.+.+..+...... ...++|+|||++++++.|+||++|.+ +||
T Consensus 291 -----------k~g~d~dG~i~a~~~~~~~d~Gay~~~~~~~~~~~~~~~~~~g~Y~ipn~~~~~~~v~TN~~p~gta~R 359 (770)
T TIGR02416 291 -----------ELAATKDGKILAMRCNVLADHGAFDACADPSKWPAGFFNICTGSYDIPVAHCAVDGVYTNKAPGGVAYR 359 (770)
T ss_pred -----------EEEECCCCcEEEEEEEEEeeccccCCCccchhhhhhhhhhcCCccccceEEEEEEEEECCCCCCCCccc
Confidence 9999999999999999999999997665443222211 36799999999999999999999997 999
Q ss_pred -CCCchhHHHHHHHHHHHHHHHhCCCHHHHHHHhcCC----------------chHHHHHHHHHhccChHHHHHHHHHHh
Q psy7003 1215 -SPGACEVTAFIEHVMDHIATVVNRDPTDVRIANLRN----------------EDVKKFYQQFRGSVKYKERRDAIETFN 1277 (1520)
Q Consensus 1215 -g~G~~q~~fa~E~~mD~iA~~lg~DP~e~R~~Nl~~----------------~~~~~~~~~~~~~~~~~~r~~~~~~~n 1277 (1520)
|||.+|+.|++|++||++|++|||||+|||++|++. .++++||+++++.++|++|++..+.++
T Consensus 360 gg~G~pq~~fa~E~~mD~~A~~lg~DP~e~R~~N~~~~~~~p~~~~~g~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~ 439 (770)
T TIGR02416 360 CSFRVTEAVYAIERAVDTLAQRLEMDSADLRIKNFIQPEQFPYTAPLGWEYDSGDYPLAMKKAMDTVDYHQLRAEQAAKR 439 (770)
T ss_pred cCCccHHHHHHHHHHHHHHHHHhCcCHHHHHHHhCCCCccCccccCCCceecCCCHHHHHHHHHHhcCchhhHHHHHHHH
Confidence 899999999999999999999999999999999982 258999999999999999876554433
Q ss_pred hhhhhhhhhhhhhhhccCCc-cccccceEEEEeccCCCC-----------cceEEEEEEcCCCeEEEEecCcccCcchHH
Q psy7003 1278 AVRVLISQYSLRHCFQNNRW-RKRGISAVVTLFPLGFYD-----------VSYAILSVFRRDATVAITTSGIEIGQGLHT 1345 (1520)
Q Consensus 1278 ~~~~~~~~~~~~~~~~~~~~-~krGig~~~~~~~~g~~~-----------~~~a~v~v~~~DGsV~i~~g~~e~GQG~~T 1345 (1520)
+ .++| .+||+|++...++.+.+. .+.+.|+| ++||+|.|.+|++|||||++|
T Consensus 440 ~---------------~g~~~~~~G~G~a~~~~~~~~~~~~~~~~~~~~~~~~a~v~l-~~dG~v~v~~g~~e~GQG~~T 503 (770)
T TIGR02416 440 K---------------RGETRELMGIGISFFTEIVGAGPSKNCDILGVGMFDSCEIRI-HPTGSAIARMGTKSQGQGHET 503 (770)
T ss_pred h---------------cCCCCceEEEEEEEEEEeccCCCcccccccccCccceEEEEE-CCCceEEEEECCCCCCCCchH
Confidence 3 3444 357889887766554332 45688996 679999999999999999999
Q ss_pred HHHHHHHHHhCCCCCcEEEecCCCCCCCCCCCCcccccccchHHHHHHHHHHHHHHhhhhhhc-----------------
Q psy7003 1346 KVAQACAYELGIPIEKIVLKPAQNNIFPNAANTGGSTASDNAARCILLCCQELKTRLMPYMDK----------------- 1408 (1520)
Q Consensus 1346 ~~aQiaA~~Lgip~e~I~v~~~dT~~~p~~~~t~gS~~t~~~g~Av~~Ac~~l~~rl~~~~~~----------------- 1408 (1520)
+++||+|++||||+|+|+|..+||+.+|++++|+|||+|.++|.|+++||++||+||++++++
T Consensus 504 ~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~gt~~Sr~t~~~G~Av~~Aa~~l~~~l~~~aa~~l~~~~~~l~~~~g~v~ 583 (770)
T TIGR02416 504 TYAQIIATELGIPAEDIMVEEGDTDTAPYGLGTYGSRSTPVAGAATALAARKIKAKAQMIAAHMLEVHEGDLEWDVDRFR 583 (770)
T ss_pred HHHHHHHHHHCCCHHHEEEEecCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHEEEECCEEE
Confidence 999999999999999999999999999999999999999999999999999999999887532
Q ss_pred -------CCCHHHHHHHHhhc-----CceeEEEEEeeccCCCCCCCccccceEEEEEEEEECCCCcEEEEEEEEEEecCc
Q psy7003 1409 -------GKSWEKTISDAFER-----GVDLQVTKSVSSQQTPDLLPMYTIPTAAATEVEVDLLTGQHQILRVDILEDTGQ 1476 (1520)
Q Consensus 1409 -------~~~w~~~~~~a~~~-----gv~l~~~~~~~~~~~~~~~~~~~~~ga~~aEVEVD~~TG~v~V~r~~~~~D~G~ 1476 (1520)
..+|.+++..++.. +..|.+++.|. +. ..+++||++++|||||++||+++|+|+++++|||+
T Consensus 584 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~----~~--~~~~~~ga~~~eVeVD~~TG~v~v~~~~~~~D~G~ 657 (770)
T TIGR02416 584 VKGDPSKFKTMADIAWAAYNSPPPGLEPGLEAVNYYD----PP--NMTYPFGAYFCVVDIDVDTGVAKVRRFYALDDCGT 657 (770)
T ss_pred ECCCCCCcccHHHHHHHHhccCccCcCCceEEEEEeC----CC--CCCCCceeEEEEEEEECCCCeEEEEEEEEEEECCC
Confidence 25899998877642 13477777773 11 22578999999999999999999999999999999
Q ss_pred ccChHHHhHHhHhHHHHHHHHHHccceeeeCCCceeecCCCCC
Q psy7003 1477 SINPAIDIGQIQGAFIMGIGLWTFEHQIHDKRTGALLTNRTWV 1519 (1520)
Q Consensus 1477 ~INP~~~~GQIeGg~vqGiG~aL~Ee~~~d~~~G~llt~~~w~ 1519 (1520)
+|||.+++|||+||++||||++|+|++.||+ +|+++|++.|+
T Consensus 658 ~iNP~~~~GQi~Gg~~qGiG~aL~E~~~~d~-~G~~l~~~~~d 699 (770)
T TIGR02416 658 RINPMIIEGQIHGGLTEGFAVAMGQEIRFDE-QGNVLGASLMD 699 (770)
T ss_pred ccCHHHHHHHHHhhHHHHHHHHHhCcceECC-CCCCCCCChhh
Confidence 9999999999999999999999999999995 69999999874
No 12
>TIGR03194 4hydrxCoA_A 4-hydroxybenzoyl-CoA reductase, alpha subunit. This model represents the largest chain, alpha, of the enzyme 4-hydroxybenzoyl-CoA reductase. In species capable of degrading various aromatic compounds by way of benzoyl-CoA, this enzyme can convert 4-hydroxybenzoyl-CoA to benzoyl-CoA.
Probab=100.00 E-value=2.9e-122 Score=1171.56 Aligned_cols=621 Identities=22% Similarity=0.276 Sum_probs=542.4
Q ss_pred CCccchhhhcccccccccCCCCCCCcEEEEEEecCCCCeEeecCCchhhhcCCCEEEEEeccCCCCCCCCCCCCCCCccc
Q psy7003 746 LPKIDAITQCAGEAEYVNDLPQLSEEYFASVVLADRGPAKIQSIDSTLALAYPGVHTFVHAKDIPGKNLAIPAAWPGQIF 825 (1520)
Q Consensus 746 ~~r~da~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~ahA~I~sID~s~A~a~PGV~avvt~~Dipg~n~~~~~~~~~~~~ 825 (1520)
++|+|+..|+||+++|++|+ .+|||||+++||||++||+|++||+++|++||||++|+|++|+|. + +..
T Consensus 1 ~~R~d~~~kvtG~a~Y~~D~-~~pgmL~a~vvrSp~ahA~I~siD~s~A~a~pGV~~V~t~~D~p~-~-~g~-------- 69 (746)
T TIGR03194 1 VPLVDGVEKVTGKAKYTADL-AAPGALVGRILRSPHAHARILAIDTSEAEALPGVIAVVTGADCPV-P-YGV-------- 69 (746)
T ss_pred CcCcchHhhCccccccccCC-CCCCCEEEEEEecCCccEEEeeccHHHHHhCCCcEEEEeHHHCCc-c-cCC--------
Confidence 48999999999999999999 789999999999999999999999999999999999999999984 2 110
Q ss_pred ccccCCCCcccccccccCCCCCCCCCCCCCCCCcccccccccCeeeecCCEEEEEEECCHHHHHHHcccceEEEeeCCCC
Q psy7003 826 EDEKAYPGVHTFVHAKDIPGKNLAIPAAWPGQIFEDEKLFAENEVEFAGQIIGAIIADNFKSAYEAAKMVKVVYSDVKTP 905 (1520)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~~~~a~~~V~y~GqpVaaVvAet~~~A~~Aa~lV~VeYe~l~~~ 905 (1520)
.....|+|+|++++|+|+|||||+|||+|+++|++|+++|+|+||++| +
T Consensus 70 ------------------------------~~~~~d~~~la~~~Vr~~G~~VA~VvA~t~~~A~~A~~~v~Veye~lp-~ 118 (746)
T TIGR03194 70 ------------------------------LPIAENEYPLARDKVRYRGDPVAAVAAVDEVTAEKALALIKVEYEELP-A 118 (746)
T ss_pred ------------------------------CCCCCCCccCCCCeEEEcCCeEEEEEECCHHHHHHHhcCCcEEEecCC-C
Confidence 001247899999999999999999999999999999999999999998 7
Q ss_pred CCCHHHHhhcCCccchhhhhccCCCccccCCCCCchhhHHHHhhcccceEEEEEEEECccccCCCCCCeeEEEEeC--Ce
Q psy7003 906 KLDIKQIVQDGDKARIVEMFKLEPTATKSKFSPDSNARWEILEAGKKLFKIKGAAEFGPQYHYTMEGQTALCVPSE--DG 983 (1520)
Q Consensus 906 v~di~~Al~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~vveg~~~~~~q~H~~mEp~~a~A~~~e--d~ 983 (1520)
++|+++|++++++ .+|+....+.-. ...+ ..++.+++|++++ ++||++|++++|+|+||||++|+|+|++ ++
T Consensus 119 v~d~~~Al~~~a~-~ih~~~~~Nv~~-~~~~--~~Gd~~~a~~~a~--~vve~~~~~~~~~h~~mEp~~~~A~~~~~~~~ 192 (746)
T TIGR03194 119 YMDPKAAMKAGAI-LLHDNKPGNIER-EVHN--EFGDVAAAFAEAD--LIREKTFTCAEVNHAHMEPNATLAEYDPVRGM 192 (746)
T ss_pred cCCHHHHhcCCCC-ccCCCCCCcEEE-EEee--ccCCHhHHhccCC--EEEEEEEEECCEeEEccCCCeEEEEEeCCCCe
Confidence 9999999998863 344321111000 0000 0122345799999 9999999999999999999999999984 46
Q ss_pred EEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCCCCCCCchHHHHHHHHHHhcCCcEEEEcChHHHHhccCCC
Q psy7003 984 VDIYAASQWVTLVQESVAGVLGLPNNRVNVKTRRIGGGYGAKLSRSCYPAVIAAVCSNVINKPVRIVMSIESMMGALGGR 1063 (1520)
Q Consensus 984 l~V~~sTQ~p~~vq~~vA~~LGlp~~kVrV~~~~vGGgFG~K~~~~~~~~~~AAlaA~~~gRPVrl~~sRee~m~~~~~R 1063 (1520)
|+||+|||+|+.+|..+|++||||.+||||+++++|||||+|.... ...+.||++|+++||||||+|||+|+|..+++|
T Consensus 193 l~v~~stQ~p~~~r~~va~~Lglp~~kVrV~~~~vGGgFG~K~~~~-~~~~~aal~a~~~grPVk~~~~ReE~~~~~~~R 271 (746)
T TIGR03194 193 LTLNSVTQVPYYVHLKLARCLQMDSARIRVIKPFLGGGFGARVEPL-NFEIIAGLLARKAKGTVRLLQTREETFITHRGR 271 (746)
T ss_pred EEEEECCCchHHHHHHHHHHhCCCHHHeEEEcCCCcCccccccccc-hHHHHHHHHHHHhCCCEEEecchhhhhhcCCCC
Confidence 9999999999999999999999999999999999999999998753 246889999999999999999999999999999
Q ss_pred CcEEEEEeeeccCCCccccccCCCccchhhhhhhhccceeeeccccccccccCcchhhhhccccceeeeeeccccccccc
Q psy7003 1064 YPVYATYEIGTIGGNLSIKHEHPEFSSDVFLLLEVVGATITIRDTFGLEQTVSPEEYLSIDMNKKVITYITFCPLIKNSY 1143 (1520)
Q Consensus 1064 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1143 (1520)
|++.++|
T Consensus 272 ~~~~~~~------------------------------------------------------------------------- 278 (746)
T TIGR03194 272 PQTYVKM------------------------------------------------------------------------- 278 (746)
T ss_pred CceEEEE-------------------------------------------------------------------------
Confidence 9999888
Q ss_pred ccccceeeeCCCCcEEEEEEEEEEecCCCcccchhhhHhhcccCCCCCCCCceEEEEEEEecCCCCCcccCCCCchhHHH
Q psy7003 1144 YLRTYKCGVDKNGVIQNLSTVFNVDKGMTLNENGFLHVRFGLGQASIYDPSTFRVVANAVRTDKPTYGFTRSPGACEVTA 1223 (1520)
Q Consensus 1144 ~~~~~k~g~d~dG~i~al~~~~~~d~Ga~~~~~~~~~~~~~~~~~~~Y~ipn~r~~~~~v~TN~p~~ga~Rg~G~~q~~f 1223 (1520)
|+|+|+||+|++++++++.|+|+|.+.+..+..+......++|+|||++++++.|+||++++|+|||||.+|+.|
T Consensus 279 -----~~g~~~dG~i~a~~~~~~~d~Gay~~~~~~~~~~~~~~~~g~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~f 353 (746)
T TIGR03194 279 -----KIGLKKDGKITACAAEVVQRGGAYAGYGIVTILYAGALLHGLYDIPAVKYDGYRVYTNTPPCGAMRGHGTVDTRA 353 (746)
T ss_pred -----EEEECCCCeEEEEEEEEeecccccCCcchHHHHHHHHhcCCCcccceEEEEEEEEEcCCCCCCCCCCCChhHHHH
Confidence 999999999999999999999999887766555555567899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHhcCC-------------chHHHHHHHHHhccChHHHHHHHHHHhhhhhhhhhhhhhh
Q psy7003 1224 FIEHVMDHIATVVNRDPTDVRIANLRN-------------EDVKKFYQQFRGSVKYKERRDAIETFNAVRVLISQYSLRH 1290 (1520)
Q Consensus 1224 a~E~~mD~iA~~lg~DP~e~R~~Nl~~-------------~~~~~~~~~~~~~~~~~~r~~~~~~~n~~~~~~~~~~~~~ 1290 (1520)
++|++||++|++|||||+|||++|+.. .+++++|+++++.++|++|++.
T Consensus 354 a~E~~mD~lA~~lg~DPve~R~~N~~~~~~~~~~g~~~~s~~~~~~l~~~~e~~~w~~~~~~------------------ 415 (746)
T TIGR03194 354 AFESLLDEMAAELGIDPFAIRRRNLLQAPTVTMNDLRVMSYGLPECLEKVEQASGWEERKGR------------------ 415 (746)
T ss_pred HHHHHHHHHHHHhCcCHHHHHHHhCcCCCCCCCCCceecCCCHHHHHHHHHHhcCchhhhhh------------------
Confidence 999999999999999999999999973 2588999999999999876431
Q ss_pred hhccCCccccccceEEEEeccCC--------CCcceEEEEEEcCCCeEEEEecCcccCcchHHHHHHHHHHHhCCCCCcE
Q psy7003 1291 CFQNNRWRKRGISAVVTLFPLGF--------YDVSYAILSVFRRDATVAITTSGIEIGQGLHTKVAQACAYELGIPIEKI 1362 (1520)
Q Consensus 1291 ~~~~~~~~krGig~~~~~~~~g~--------~~~~~a~v~v~~~DGsV~i~~g~~e~GQG~~T~~aQiaA~~Lgip~e~I 1362 (1520)
.|++||+|+++..++.+. .+.+.+.|++ ++||+|.|.+|++|||||++|+++||+|++||||+|+|
T Consensus 416 -----~~~~rGiG~a~~~~~~~~~~~~~~~~~~~~~a~v~l-~~dG~v~v~~g~~e~GqG~~T~~~qiaAe~LGip~d~V 489 (746)
T TIGR03194 416 -----LPKGRGLGIACSHFVSGSAKPIHFTGEPHATVALKL-DFDGGITLLTGAADIGQGSSTIASQVAAEVLGVRLSRI 489 (746)
T ss_pred -----ccccEEEEEEEEEEeccCCcccccCCCCCceEEEEE-cCCccEEEEEcCCCCCCCHHHHHHHHHHHHhCCCHHhE
Confidence 124789999998875532 2367899996 78999999999999999999999999999999999999
Q ss_pred EEecCCCCCCCCCCCCcccccccchHHHHHHHHHHHHHHhhhhhhc------------------------CCCHHHHHHH
Q psy7003 1363 VLKPAQNNIFPNAANTGGSTASDNAARCILLCCQELKTRLMPYMDK------------------------GKSWEKTISD 1418 (1520)
Q Consensus 1363 ~v~~~dT~~~p~~~~t~gS~~t~~~g~Av~~Ac~~l~~rl~~~~~~------------------------~~~w~~~~~~ 1418 (1520)
+|..+||+.+|++++|+|||+|.++|.||++||++||+||++++++ ..+|.+++..
T Consensus 490 ~v~~~DT~~~p~~~gt~~Sr~t~~~G~Av~~Aa~~l~~~l~~~aa~~l~~~~~~l~~~~g~v~~~~~~~~~~~~~~~~~~ 569 (746)
T TIGR03194 490 RVISADSALTPKDNGSYSSRVTFMVGNAAIDAAEELKGVLVAAAAKKLDAREEDIECAGEMFFVSGSADPGLSFQEVVKA 569 (746)
T ss_pred EEEccCCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHEEEECCEEEECCCCCCceeHHHHHHH
Confidence 9999999999999999999999999999999999999999887543 2579998865
Q ss_pred HhhcCceeEEEEEeeccCCC--CC-------CCccccceEEEEEEEEECCCCcEEEEEEEEEEecCcccChHHHhHHhHh
Q psy7003 1419 AFERGVDLQVTKSVSSQQTP--DL-------LPMYTIPTAAATEVEVDLLTGQHQILRVDILEDTGQSINPAIDIGQIQG 1489 (1520)
Q Consensus 1419 a~~~gv~l~~~~~~~~~~~~--~~-------~~~~~~~ga~~aEVEVD~~TG~v~V~r~~~~~D~G~~INP~~~~GQIeG 1489 (1520)
++.....+.+++.|...... +. ...+++|+|+++|||||++||+++|+|+++++|||++|||++++|||||
T Consensus 570 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aeVeVD~~TG~v~v~~~~~~~D~G~viNP~~v~gQi~G 649 (746)
T TIGR03194 570 ALVDSGTITVKGTYTCPPEFQGGKKRGGAVGSTMGFSYAAQVVEVSVDEETGKVTVHKVWVAVDCGKAINPLAVEGQVQG 649 (746)
T ss_pred hcccCCCceEEEEecCCCccccccccccccCcccccceeEEEEEEEEECCCCCEEEEEEEEEEeCCCcCCHHHHHHHHHH
Confidence 65444567778777411100 00 1125689999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHccceeeeCCCceeecCCCCC
Q psy7003 1490 AFIMGIGLWTFEHQIHDKRTGALLTNRTWV 1519 (1520)
Q Consensus 1490 g~vqGiG~aL~Ee~~~d~~~G~llt~~~w~ 1519 (1520)
|++||||++|+|++.|| + |+++|+|.|.
T Consensus 650 g~~~GiG~aL~E~~~~d-~-G~~~~~~l~~ 677 (746)
T TIGR03194 650 AVWMGMGQALSEETVYD-N-GRMKHASLLD 677 (746)
T ss_pred HHHHHHHHHhcCceEec-C-CeECCCChhh
Confidence 99999999999999999 4 9999998774
No 13
>TIGR03196 pucD xanthine dehydrogenase D subunit. This gene has been characterized in B. subtilis as the molybdopterin binding-subunit of xanthine dehydrogenase (pucD), acting in conjunction with pucC, the FAD-binding subunit and pucE, the FeS-binding subunit. The more common XDH complex (GenProp0640) includes the xdhB gene which is related to pucD. It appears that most of the relatives of pucD outside of this narrow clade are involved in other processes as they are found in unrelated genomic contexts, contain the more common XDH complex and/or do not appear to process purines to allantoin.
Probab=100.00 E-value=8.3e-122 Score=1169.37 Aligned_cols=632 Identities=23% Similarity=0.283 Sum_probs=534.8
Q ss_pred CCCCCCC-ccchhhhcccccccccCCCCCCCcEEEEEEecCCCCeEeecCCchhhhcCCCEEEEEeccCCCCCCCCCCCC
Q psy7003 741 PLTKPLP-KIDAITQCAGEAEYVNDLPQLSEEYFASVVLADRGPAKIQSIDSTLALAYPGVHTFVHAKDIPGKNLAIPAA 819 (1520)
Q Consensus 741 ~iGk~~~-r~da~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~ahA~I~sID~s~A~a~PGV~avvt~~Dipg~n~~~~~~ 819 (1520)
.|||+++ |+|+..||||+++|++|+ ++|||||++++|||++||+|++||+++|+++|||++|+|++|+|+.|.+
T Consensus 2 ~iG~~~~~R~d~~~kvtG~a~Y~~Di-~~pgmL~a~~vrSp~aha~I~siD~s~A~a~pGV~~V~t~~D~p~~~~~---- 76 (768)
T TIGR03196 2 GIGKPSRVRPDGPDKVTGEFKYMGDL-RFPGMLHAKTLRSAHAHAEIRRVCTDAAEKLEGVQAMVTAADVPGLARF---- 76 (768)
T ss_pred cCCCcCCcCcchHhhCcccccccccC-CCCCcEEEEEEecCCCcEEEeeccHHHHHhCCCcEEEEehHHCCCCCCC----
Confidence 3899999 999999999999999999 7999999999999999999999999999999999999999999854322
Q ss_pred CCCcccccccCCCCcccccccccCCCCCCCCCCCCCCCCcccccccccCeeeecCCEEEEEEECCHHHHHHHcccceEEE
Q psy7003 820 WPGQIFEDEKAYPGVHTFVHAKDIPGKNLAIPAAWPGQIFEDEKLFAENEVEFAGQIIGAIIADNFKSAYEAAKMVKVVY 899 (1520)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~~~~a~~~V~y~GqpVaaVvAet~~~A~~Aa~lV~VeY 899 (1520)
|....|+|+|++++|+|+|||||+|||+|+++|++|+++|+|+|
T Consensus 77 ------------------------------------g~~~~~~~~la~~~Vr~~G~~VA~VvA~t~~~A~~A~~~v~Vey 120 (768)
T TIGR03196 77 ------------------------------------GIIIADQPVFAADEIRYAGDAIAAVAAEDEEIAEAALAAIEVDY 120 (768)
T ss_pred ------------------------------------CccCCCcccccCCEEEEcCCeEEEEEECCHHHHHHHhccCceEE
Confidence 11124789999999999999999999999999999999999999
Q ss_pred eeCCCCCCCHHHHhhcCCccchhhhhccCCCccccCCCCCchhhHHHHhhcccceEEEEEEEECccccCCCCCCeeEEEE
Q psy7003 900 SDVKTPKLDIKQIVQDGDKARIVEMFKLEPTATKSKFSPDSNARWEILEAGKKLFKIKGAAEFGPQYHYTMEGQTALCVP 979 (1520)
Q Consensus 900 e~l~~~v~di~~Al~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~vveg~~~~~~q~H~~mEp~~a~A~~ 979 (1520)
|++| +++|+++|++++++ .+|+. .+.... ..+ ..++.+++|++++ ++||++|++++|+|+||||++|+|.|
T Consensus 121 e~lp-~v~d~~~a~~~~a~-~i~~~--~ni~~~-~~~--~~Gd~~~af~~a~--~vve~~y~~~~~~h~~mEp~~~~A~~ 191 (768)
T TIGR03196 121 EELA-PMDDPDKALQPDAE-PLHEA--GNILHE-AEF--RHGDPDEGFAAGD--TVFEDQYELGMQDHAFLAPEAALAMP 191 (768)
T ss_pred EeCC-CcCCHHHHhcCCCC-eECCC--CcCcce-eee--ccCCHhHHhccCC--EEEEEEEEeCCeeeeecCCceEEEEE
Confidence 9997 69999999987752 34421 110000 000 1122345789999 99999999999999999999999999
Q ss_pred e-CCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCCCCCCCchHHHHHHHHHHhcCCcEEEEcChHHHHh
Q psy7003 980 S-EDGVDIYAASQWVTLVQESVAGVLGLPNNRVNVKTRRIGGGYGAKLSRSCYPAVIAAVCSNVINKPVRIVMSIESMMG 1058 (1520)
Q Consensus 980 ~-ed~l~V~~sTQ~p~~vq~~vA~~LGlp~~kVrV~~~~vGGgFG~K~~~~~~~~~~AAlaA~~~gRPVrl~~sRee~m~ 1058 (1520)
+ +|+|+||+|||+|+.+|..+|++||||.+||||+++++|||||+|.... ..+.||++|+++||||||+|||+|+|.
T Consensus 192 ~~~g~l~v~~stQ~p~~~r~~lA~~Lglp~~~VrV~~~~vGGgFG~K~~~~--~~~~aa~~A~~~gRPVk~~~sReE~~~ 269 (768)
T TIGR03196 192 AADGGFDLRAATQHGHKDREQIAACFDIPEEKIRITLAGMGGAFGGKDDLN--IQIHAALLALASGLPVKIAQDRKESFL 269 (768)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHhCCCHHHEEEEeCCCCCccCCccccc--HHHHHHHHHHHhCCCEEEEechHHhhh
Confidence 8 4579999999999999999999999999999999999999999999854 456789999999999999999999999
Q ss_pred ccCCCCcEEEEEeeeccCCCccccccCCCccchhhhhhhhccceeeeccccccccccCcchhhhhccccceeeeeecccc
Q psy7003 1059 ALGGRYPVYATYEIGTIGGNLSIKHEHPEFSSDVFLLLEVVGATITIRDTFGLEQTVSPEEYLSIDMNKKVITYITFCPL 1138 (1520)
Q Consensus 1059 ~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1138 (1520)
.+++||++.+++
T Consensus 270 ~~~~r~~~~~~~-------------------------------------------------------------------- 281 (768)
T TIGR03196 270 GGIHRHPAKITF-------------------------------------------------------------------- 281 (768)
T ss_pred cCCCCCCeEEEE--------------------------------------------------------------------
Confidence 999999999888
Q ss_pred cccccccccceeeeCCCCcEEEEEEEEEEecCCCcccchhhhHhhcccCCCCCCCCceEEEEEEEecCCCCCcccCCCCc
Q psy7003 1139 IKNSYYLRTYKCGVDKNGVIQNLSTVFNVDKGMTLNENGFLHVRFGLGQASIYDPSTFRVVANAVRTDKPTYGFTRSPGA 1218 (1520)
Q Consensus 1139 ~~~~~~~~~~k~g~d~dG~i~al~~~~~~d~Ga~~~~~~~~~~~~~~~~~~~Y~ipn~r~~~~~v~TN~p~~ga~Rg~G~ 1218 (1520)
|+|+|+||+|++++++++.|+|+|.+.+..+......+..++|++||++++++.|+||+++.|||||||.
T Consensus 282 ----------k~g~~~dG~i~a~~~~~~~d~Gay~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~ 351 (768)
T TIGR03196 282 ----------KHGADADGNLLAHDAKIVADGGAYASLGPAVLAFAVEHAAGPYRIPNAHLEGISVFTNNGPAGAFRGFGG 351 (768)
T ss_pred ----------EEEECCCCcEEEEEEEEEecccccCCccHHHHHHHHHhcCCCcccceEEEEEEEEEcCCCCCCccCCCCh
Confidence 9999999999999999999999998766555444444578999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHhCCCHHHHHHHhcCC--------------chHHHHHHHHHhccChH-----HHHHHHHHHhhh
Q psy7003 1219 CEVTAFIEHVMDHIATVVNRDPTDVRIANLRN--------------EDVKKFYQQFRGSVKYK-----ERRDAIETFNAV 1279 (1520)
Q Consensus 1219 ~q~~fa~E~~mD~iA~~lg~DP~e~R~~Nl~~--------------~~~~~~~~~~~~~~~~~-----~r~~~~~~~n~~ 1279 (1520)
+|+.|++|++||++|++|||||+|||++|+.. .++++||+++++.++|+ ++......|++
T Consensus 352 ~q~~fa~E~~mDelA~~lg~DP~e~R~~Nl~~~g~~~~~g~~~~~~~~~~~~l~~~~~~~~w~~~~~~~~~~~~~~~~~- 430 (768)
T TIGR03196 352 NQITFAHEAHLDRLADALGIDPLDLRRKNARKPGDLGPLEHRIAAPDGAAEVIEAIASRPLPKAPILKKANRAVTALPG- 430 (768)
T ss_pred hHHHHHHHHHHHHHHHHhCcCHHHHHHHhCCCCCCcCCCCcccCCcCCHHHHHHHHHhhccccchhhhhhhhhhhhhhh-
Confidence 99999999999999999999999999999982 13689999999999998 33222223332
Q ss_pred hhhhhhhhhhhhhccCCccccccceEEEEeccCCC----Cc--ceEEEEEEcCCCe--EEEEecCcccCcchHHHHHHHH
Q psy7003 1280 RVLISQYSLRHCFQNNRWRKRGISAVVTLFPLGFY----DV--SYAILSVFRRDAT--VAITTSGIEIGQGLHTKVAQAC 1351 (1520)
Q Consensus 1280 ~~~~~~~~~~~~~~~~~~~krGig~~~~~~~~g~~----~~--~~a~v~v~~~DGs--V~i~~g~~e~GQG~~T~~aQia 1351 (1520)
.+...+++.|++||+|+++..++.+++ +. +.+.|+| ++||+ |.|.+|++|||||++|+++|||
T Consensus 431 --------~~~~~~~~g~~~rGiG~a~~~~~~~~~~~~~~~~~~~a~v~l-~~dGsv~v~v~~g~~d~GQG~~T~~aQia 501 (768)
T TIGR03196 431 --------GRPAAAECGRLQRGTGAAIAMHGGGFGEGMDDAAVAGARLEL-AEDGTVKIRAHFACAECGQGFLAAAEQIA 501 (768)
T ss_pred --------hhhhhhhcCCeeEEEEEEEEEecccCCCCccccCCccEEEEE-eCCCCeEEEEEECCCCcCCCHHHHHHHHH
Confidence 011112334467899999998876643 23 3789996 57996 8889999999999999999999
Q ss_pred HHHhCCCCCcEEEecCCCCCCCCCCCCcccccccchHHHHHHHHHHHHHHhhhhhhc--C--------------------
Q psy7003 1352 AYELGIPIEKIVLKPAQNNIFPNAANTGGSTASDNAARCILLCCQELKTRLMPYMDK--G-------------------- 1409 (1520)
Q Consensus 1352 A~~Lgip~e~I~v~~~dT~~~p~~~~t~gS~~t~~~g~Av~~Ac~~l~~rl~~~~~~--~-------------------- 1409 (1520)
|++||||+|+|+|..+||+.+|++++|+|||+|.++|.||++||++||+||++++++ +
T Consensus 502 Ae~LGip~e~V~v~~~DT~~~p~~~gt~~Sr~t~~~G~Av~~Aa~~l~~kl~~~aa~~l~~~~~~~~~~~g~~~~~~~~v 581 (768)
T TIGR03196 502 MEELGCAAEDISIAIADTAKGPKAGSSSASRGTSMSGGAIQGACAAFAAQLKARAAETAGLPAEVVEAPAENLIPGAAEI 581 (768)
T ss_pred HHHhCCCHHHEEEecCCCCCCCCCCCCchhhhhHhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhEEEeCCeeeecccce
Confidence 999999999999999999999999999999999999999999999999999887543 0
Q ss_pred ----------CCHHHHHHHHhhcCceeEEEEEe-eccCC-------CCCCCccccceEEEEEEEEECCCCcEEEEEEEEE
Q psy7003 1410 ----------KSWEKTISDAFERGVDLQVTKSV-SSQQT-------PDLLPMYTIPTAAATEVEVDLLTGQHQILRVDIL 1471 (1520)
Q Consensus 1410 ----------~~w~~~~~~a~~~gv~l~~~~~~-~~~~~-------~~~~~~~~~~ga~~aEVEVD~~TG~v~V~r~~~~ 1471 (1520)
.+|.+++. +..+.+.+.| ..... .+.++.+++||++++|||||++||+++|+|++++
T Consensus 582 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ga~~~eveVd~~tG~v~v~~~~~~ 656 (768)
T TIGR03196 582 VGDKNEAALRVPLAEAAA-----DGPIAAETAFHDFPTSALDADVGQGDGHFAFAAAAAAAEVDVDLDLGDVKLIDCAHA 656 (768)
T ss_pred eeecCCCcceEEHHHHhc-----cccceeeeccccCCCcccccccccCCCcccccceEEEEEEEEECCCCcEEEEEEEEE
Confidence 12333321 1112233322 10000 0111346779999999999999999999999999
Q ss_pred EecCcccChHHHhHHhHhHHHHHHHHHHccceeeeCCCceeecCCCCC
Q psy7003 1472 EDTGQSINPAIDIGQIQGAFIMGIGLWTFEHQIHDKRTGALLTNRTWV 1519 (1520)
Q Consensus 1472 ~D~G~~INP~~~~GQIeGg~vqGiG~aL~Ee~~~d~~~G~llt~~~w~ 1519 (1520)
+|||++|||.+++||||||++||||++|+|++.|| +|+++|+|-|.
T Consensus 657 ~D~G~~iNp~~~~gQi~Gg~~~Gig~al~E~~~~~--~G~~~~~~~~~ 702 (768)
T TIGR03196 657 IAAGPVLNPLALRGQIEGGAAMALGLALMEEAKMT--DGRVAAENFDD 702 (768)
T ss_pred EECCCccCHHHHHHHHHHHHHHHHHHHHhCCeEec--CCeECCCCccc
Confidence 99999999999999999999999999999999997 69999998764
No 14
>COG1529 CoxL Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion]
Probab=100.00 E-value=6.6e-93 Score=900.58 Aligned_cols=616 Identities=24% Similarity=0.346 Sum_probs=524.9
Q ss_pred CCCCCCCCCccchhhhcccccccccCCCCCCCcEEEEEEecCCCCeEeecCCchhhhcCCCEEEEEeccCCCC-CCCCCC
Q psy7003 739 LWPLTKPLPKIDAITQCAGEAEYVNDLPQLSEEYFASVVLADRGPAKIQSIDSTLALAYPGVHTFVHAKDIPG-KNLAIP 817 (1520)
Q Consensus 739 ~~~iGk~~~r~da~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~ahA~I~sID~s~A~a~PGV~avvt~~Dipg-~n~~~~ 817 (1520)
.+.+|+++.|.|+..+|||+++|++|+ .+|||+|++|||||++|++|++||.++|+++|||++|+|++|+|. .+...
T Consensus 3 ~~~~gr~~~R~~~~~~vtG~~~y~~d~-~~~~~~~~~~vrs~~a~a~i~~id~~ea~~~~gv~av~ta~~l~~~~~~~~- 80 (731)
T COG1529 3 AEIIGRSVLRADGLGKVTGKGRYADDI-VAPGMLYAAFVRSPYAHARIVSIDVSEAQGLPGVLAVITAEELPAWSPVRV- 80 (731)
T ss_pred cccCCCCcccccchhheeeeeheehhh-cCCCCceEEEEeccCCceEEEEechHHHhhCCCeEEEechhhCcccccccc-
Confidence 356899999999999999999999999 899999999999999999999999999999999999999999985 11000
Q ss_pred CCCCCcccccccCCCCcccccccccCCCCCCCCCCCCCCCCcccccccccCeeeecCCEEEEEEECCHHHHHHHcccceE
Q psy7003 818 AAWPGQIFEDEKAYPGVHTFVHAKDIPGKNLAIPAAWPGQIFEDEKLFAENEVEFAGQIIGAIIADNFKSAYEAAKMVKV 897 (1520)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~~~~a~~~V~y~GqpVaaVvAet~~~A~~Aa~lV~V 897 (1520)
... ..+. +|+.++|+|.||+|++|+|+|+++|++|+++|+|
T Consensus 81 ----------------------------------~~~----p~~~-~l~~~~v~~~G~~vA~vva~d~~~A~~aa~~v~V 121 (731)
T COG1529 81 ----------------------------------ELA----PADE-VLARGKVRYTGEPVAAVVAEDEYQARAAAELVLV 121 (731)
T ss_pred ----------------------------------ccC----Ccch-hhccCceEEeCCeEEEEEeCCHHHHHHHHhhcee
Confidence 000 1112 7888999999999999999999999999999999
Q ss_pred EEeeCCCCCCCHHHHhhcCCccchhhhhccCCCccccCCCCCchhhHHHHhhcccceEEEEEEEECccccCCCCCCeeEE
Q psy7003 898 VYSDVKTPKLDIKQIVQDGDKARIVEMFKLEPTATKSKFSPDSNARWEILEAGKKLFKIKGAAEFGPQYHYTMEGQTALC 977 (1520)
Q Consensus 898 eYe~l~~~v~di~~Al~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~vveg~~~~~~q~H~~mEp~~a~A 977 (1520)
+|++++ +++|+++|+.+++ ..+|+.. +.+. ...| ++.+ +|++++ ++++.+|.++++.|.+|||+++++
T Consensus 122 ~ye~l~-~~v~~~~a~~~~~-~~ih~~~--n~~~-~~~~----g~~~-a~a~A~--~~v~~~~~~~~~~~~~~E~~g~~a 189 (731)
T COG1529 122 EYEALP-PVVDPEEALAEDA-PVIHDEL--NIAR-DATF----GDDD-AFAAAA--VVVEAPYKTPRKDPNPMEPHGVVA 189 (731)
T ss_pred eeccCC-CcCCHHHHhcCCC-ccccccc--cccc-cccc----ccch-hhhcCc--EEeeeeeeccCcCccCccccccee
Confidence 999998 6999999999876 3344321 1110 0111 1222 689999 999999999999999999999999
Q ss_pred EEe-CCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCCCCCCCchHHHHHHHHHHhcCCcEEEEcChHHH
Q psy7003 978 VPS-EDGVDIYAASQWVTLVQESVAGVLGLPNNRVNVKTRRIGGGYGAKLSRSCYPAVIAAVCSNVINKPVRIVMSIESM 1056 (1520)
Q Consensus 978 ~~~-ed~l~V~~sTQ~p~~vq~~vA~~LGlp~~kVrV~~~~vGGgFG~K~~~~~~~~~~AAlaA~~~gRPVrl~~sRee~ 1056 (1520)
.|+ +++|++|++||+|+.++..++++|++|+++|+|+.+++|||||+|.....+ ...++++|+++||||||+++|+|.
T Consensus 190 ~~~d~~~lt~~~~tQ~~~~~~~~l~~~l~~p~~~vrvi~~dvGggfG~K~~~~~~-~~~~~~aa~~~grpVk~~~tR~e~ 268 (731)
T COG1529 190 VPDDGDKLTVWASTQIPHRLRGMLAAVLGIPPSKVRVISPDVGGGFGSKGVVYVE-EILAALAAVVAGRPVKWIETREEL 268 (731)
T ss_pred eEcCCCeEEEEEccCCchHHHHHHHHHhCCCHHHeEEecCCCCcccCCcccceeH-HHHHHHHHHhcCCCeEEecchHHh
Confidence 999 457999999999999999999999999999999999999999999987654 456678999999999999999999
Q ss_pred HhccCCCCcEEEEEeeeccCCCccccccCCCccchhhhhhhhccceeeeccccccccccCcchhhhhccccceeeeeecc
Q psy7003 1057 MGALGGRYPVYATYEIGTIGGNLSIKHEHPEFSSDVFLLLEVVGATITIRDTFGLEQTVSPEEYLSIDMNKKVITYITFC 1136 (1520)
Q Consensus 1057 m~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1136 (1520)
|....+|++...++
T Consensus 269 ~~~~~~~~~~~~~~------------------------------------------------------------------ 282 (731)
T COG1529 269 FVATGHRRATLIDV------------------------------------------------------------------ 282 (731)
T ss_pred hhccCCCCCceEEe------------------------------------------------------------------
Confidence 99999999988776
Q ss_pred cccccccccccceeeeCCCCcEEEEEEEEEEecCCCcccchhhhHhhcccCCCCCCCCceEEEEEEEecCCCCCcccCCC
Q psy7003 1137 PLIKNSYYLRTYKCGVDKNGVIQNLSTVFNVDKGMTLNENGFLHVRFGLGQASIYDPSTFRVVANAVRTDKPTYGFTRSP 1216 (1520)
Q Consensus 1137 ~~~~~~~~~~~~k~g~d~dG~i~al~~~~~~d~Ga~~~~~~~~~~~~~~~~~~~Y~ipn~r~~~~~v~TN~p~~ga~Rg~ 1216 (1520)
++|+++||+|+++..++..|.|+|. +............++|.|+|.++..+.++||++|+++|||+
T Consensus 283 ------------~~~a~~dg~l~~~~~~~~~~~Gay~--~~~~~~~~~~~~~g~Y~i~~~~~~~~~v~tn~~p~~~~Rg~ 348 (731)
T COG1529 283 ------------KLGADKDGRLLAIKGTVAADTGAYN--GPTVPAAAAGLARGPYKIEAVYIEPYLVHTNMPPNGAYRGA 348 (731)
T ss_pred ------------eeecCcCCcEEeeeeeEEecCCCcc--ccchhHHHHHhcCCceecccceeeeEEEEcCCCCCcccccC
Confidence 9999999999999999999999997 22232333334789999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHHhCCCHHHHHHHhcCC------------chHHHHHHHHHhccChHHHHHHHHHHhhhhhhhh
Q psy7003 1217 GACEVTAFIEHVMDHIATVVNRDPTDVRIANLRN------------EDVKKFYQQFRGSVKYKERRDAIETFNAVRVLIS 1284 (1520)
Q Consensus 1217 G~~q~~fa~E~~mD~iA~~lg~DP~e~R~~Nl~~------------~~~~~~~~~~~~~~~~~~r~~~~~~~n~~~~~~~ 1284 (1520)
|.++++|++|++||++|++|||||+|+|++|++. .++..++.+..+...|.+|......-+
T Consensus 349 g~~~~~~a~E~~~d~lA~~Lgidp~eiR~~n~~~~g~~~~~~~~~~~~~~~~~~~~ak~~~~~~~~~k~~~~r------- 421 (731)
T COG1529 349 GRPEGTFALERAVDELAEELGIDPVEIRLRNLIRGGPFGLGRRYDSGDYLEELDEAAKRFGWSERPVKPIWTR------- 421 (731)
T ss_pred CCchhHHHHHHHHHHHHHHhCCCHHHHhhhhccccCCCCCcccccCccHHHHHHHHHHhcCcccccCChhhhh-------
Confidence 9999999999999999999999999999999983 247788888888888876543322111
Q ss_pred hhhhhhhhccCCccccccceEEEEeccCCCCcceEEEEEEcCCCeEEEEecCcccCcchHHHHHHHHHHHhCCCCCcEEE
Q psy7003 1285 QYSLRHCFQNNRWRKRGISAVVTLFPLGFYDVSYAILSVFRRDATVAITTSGIEIGQGLHTKVAQACAYELGIPIEKIVL 1364 (1520)
Q Consensus 1285 ~~~~~~~~~~~~~~krGig~~~~~~~~g~~~~~~a~v~v~~~DGsV~i~~g~~e~GQG~~T~~aQiaA~~Lgip~e~I~v 1364 (1520)
+.. .++|+|++...++.+++..+.+.|++ +.||++.+.+|..++|||+.|.++|++|++||||.++|++
T Consensus 422 ---------e~~-~~~G~g~a~~~~~~~~~~~~~a~v~~-~~~g~v~v~~g~~~~G~G~~t~~~q~~ae~lgip~~~V~v 490 (731)
T COG1529 422 ---------EGD-LRRGVGRAMYTEPSGAGPGEGARVRL-EADGTVTVRTGATDIGQGTDTVLAQIAAEELGIPPDDVEV 490 (731)
T ss_pred ---------cCC-eeeeeEEEEEEEeccCCCCCcEEEEE-cCCCcEEEEECCccCCCcHHHHHHHHHHHHhCCCHHHEEE
Confidence 223 35799999998888776657789985 7899999999999999999999999999999999999999
Q ss_pred ecCCCCCCCCCCCCcccccccchHHHHHHHHHHHHHHhhhhhhc----------------C---------CCHHHHHHHH
Q psy7003 1365 KPAQNNIFPNAANTGGSTASDNAARCILLCCQELKTRLMPYMDK----------------G---------KSWEKTISDA 1419 (1520)
Q Consensus 1365 ~~~dT~~~p~~~~t~gS~~t~~~g~Av~~Ac~~l~~rl~~~~~~----------------~---------~~w~~~~~~a 1419 (1520)
..+||+..+.+.+|+|||++.+.+.|+++||++|++|+...+.. . .+|.+.+.++
T Consensus 491 ~~gDt~~~~~~~~s~GS~~~~~~~~A~~~a~~~l~~k~~~~aa~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~ 570 (731)
T COG1529 491 VHGDTDVPVGGWGSVGSRGTAVAGSAVIDAAAKLAEKDPVAAARMLGADAEDVVLEDGAFKVGGGDRRSAVSLKEVAGKG 570 (731)
T ss_pred EecCCCCCCCCCCCcCcccccchHHHHHHHHHHHHHHHHHHHHhhhCCChhHeeeccCeeeeccCCccceeeHHHhhhcc
Confidence 99999999999999999999999999999999999987765422 0 2344444433
Q ss_pred hhcCceeEEEEEeeccCCCCCCCccccceEEEEEEEEECCCCcEEEEEEEEEEecCcccChHHHhHHhHhHHHHHHHHHH
Q psy7003 1420 FERGVDLQVTKSVSSQQTPDLLPMYTIPTAAATEVEVDLLTGQHQILRVDILEDTGQSINPAIDIGQIQGAFIMGIGLWT 1499 (1520)
Q Consensus 1420 ~~~gv~l~~~~~~~~~~~~~~~~~~~~~ga~~aEVEVD~~TG~v~V~r~~~~~D~G~~INP~~~~GQIeGg~vqGiG~aL 1499 (1520)
...++.+. ..|. .. ..++|+|+++|||||++||++||+|+++++|||++|||.+++|||+||++||||++|
T Consensus 571 ~~~~~~~~--~~~~----~~---~~~~~~A~~~EV~Vd~~tG~vrV~r~~~~~D~G~vvNP~~~~~Qv~GGi~~Gig~aL 641 (731)
T COG1529 571 LAPGLAVA--ASFG----SD---NTYPYGAHIAEVEVDPETGEVRVLRVVAVDDCGRVVNPKLAEGQVEGGILMGIGMAL 641 (731)
T ss_pred ccCccccc--cccc----cc---ccccceeEEEEEEEECCCCcEEEEEEEEEEecCCccCHHHHHHHHHhHHHHHHHHHh
Confidence 22333322 2221 11 156899999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeeCCCceeecCC
Q psy7003 1500 FEHQIHDKRTGALLTNR 1516 (1520)
Q Consensus 1500 ~Ee~~~d~~~G~llt~~ 1516 (1520)
+|+.+|| ++|+++|.|
T Consensus 642 ~E~~i~d-~~g~~~~~n 657 (731)
T COG1529 642 YEEAIYD-EDGQLLNSN 657 (731)
T ss_pred hccceEC-CCCCcCCCC
Confidence 9999999 589888876
No 15
>PF02738 Ald_Xan_dh_C2: Molybdopterin-binding domain of aldehyde dehydrogenase; InterPro: IPR008274 Aldehyde oxidase (1.2.3.1 from EC) catalyses the conversion of an aldehyde in the presence of oxygen and water to an acid and hydrogen peroxide. The enzyme is a homodimer, and requires FAD, molybdenum and two 2FE-2S clusters as cofactors. Xanthine dehydrogenase (1.1.1.204 from EC) catalyses the hydrogenation of xanthine to urate, and also requires FAD, molybdenum and two 2FE-2S clusters as cofactors. This activity is often found in a bifunctional enzyme with xanthine oxidase (1.1.3.22 from EC) activity too. The enzyme can be converted from the dehydrogenase form to the oxidase form irreversibly by proteolysis or reversibly through oxidation of sulphydryl groups.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3NVZ_C 3NVY_C 1FO4_B 3NRZ_L 3AM9_A 3B9J_C 3AX7_B 3NVW_L 3BDJ_A 3ETR_N ....
Probab=100.00 E-value=1.1e-93 Score=887.41 Aligned_cols=479 Identities=28% Similarity=0.390 Sum_probs=393.5
Q ss_pred hHHHHhhcccceEEEEEEEECccccCCCCCCeeEEEEe-CCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCC
Q psy7003 943 RWEILEAGKKLFKIKGAAEFGPQYHYTMEGQTALCVPS-EDGVDIYAASQWVTLVQESVAGVLGLPNNRVNVKTRRIGGG 1021 (1520)
Q Consensus 943 ~~~~~~~a~~~~vveg~~~~~~q~H~~mEp~~a~A~~~-ed~l~V~~sTQ~p~~vq~~vA~~LGlp~~kVrV~~~~vGGg 1021 (1520)
.+++|++|+ ++||++|++++|+|++|||++|+|.|+ +++|+||++||+|+.+|..||++||||++||||+.+++|||
T Consensus 23 ve~af~~a~--~vve~~y~~~~~~h~~mEp~~~~A~~~~~g~l~v~~~tQ~p~~~r~~va~~lglp~~~V~V~~~~~GGg 100 (547)
T PF02738_consen 23 VEAAFAEAD--HVVEAEYRTPRQAHAPMEPHGAVAWWDEDGRLTVWSSTQWPFHVRRAVAEALGLPPEKVRVISPYVGGG 100 (547)
T ss_dssp HHHHHHHTS--EEEEEEEEE-BB----SS-SEEEEEEETTTEEEEEES-SSHHHHHHHHHHHHTS-GGGEEEEESB-S--
T ss_pred HHHHHhhCC--EEEEEEEEECCccccCCCCCeEEEEEccCCCEEEEECCcCHhHHHHHHhhhhcCChhHEEEeeeecCCC
Confidence 346799999 999999999999999999999999999 77899999999999999999999999999999999999999
Q ss_pred CCCCCCCCchHHHHHHHHHHhcCCcEEEEcChHHHHhccCCCCcEEEEEeeeccCCCccccccCCCccchhhhhhhhccc
Q psy7003 1022 YGAKLSRSCYPAVIAAVCSNVINKPVRIVMSIESMMGALGGRYPVYATYEIGTIGGNLSIKHEHPEFSSDVFLLLEVVGA 1101 (1520)
Q Consensus 1022 FG~K~~~~~~~~~~AAlaA~~~gRPVrl~~sRee~m~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 1101 (1520)
||.|. ......+.||++|+++||||||+|||+|+|....+||++.+++
T Consensus 101 FG~~~-~~~~~~~~aa~~a~~~grPVk~~~tR~e~~~~~~~r~~~~~~~------------------------------- 148 (547)
T PF02738_consen 101 FGKKK-QDSPIAVLAALAAKKTGRPVKLVWTREEDFRAGPKRPPTRIRV------------------------------- 148 (547)
T ss_dssp TTTTS-STHHHHHHHHHHHHHHSSEEEEE--HHHHHHHS-BB-EEEEEE-------------------------------
T ss_pred CCCcc-ccchHHHHHHHHHhccCceEEEEechHHhcCCCCCccHHHhhh-------------------------------
Confidence 99333 2345678899999999999999999999999999999999888
Q ss_pred eeeeccccccccccCcchhhhhccccceeeeeecccccccccccccceeeeCCCCcEEEEEEEEEEecCCCcccchhhhH
Q psy7003 1102 TITIRDTFGLEQTVSPEEYLSIDMNKKVITYITFCPLIKNSYYLRTYKCGVDKNGVIQNLSTVFNVDKGMTLNENGFLHV 1181 (1520)
Q Consensus 1102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~g~d~dG~i~al~~~~~~d~Ga~~~~~~~~~~ 1181 (1520)
|+|+|+||+|+|++++++.|.|+|...+..+..
T Consensus 149 -----------------------------------------------~~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~~~~ 181 (547)
T PF02738_consen 149 -----------------------------------------------RAGADKDGKITALDHDIYADGGAYASFSPAVAP 181 (547)
T ss_dssp -----------------------------------------------EEEE-TTS-EEEEEEEEEEEEESS-TTHHHHHH
T ss_pred -----------------------------------------------hheECCCCCEEEeeeeeeccCCccccccccchh
Confidence 999999999999999999999999988766666
Q ss_pred hhcccCCCCCCCCceEEEEEEEecCCCCCcccCCCCchhHHHHHHHHHHHHHHHhCCCHHHHHHHhcCC-----------
Q psy7003 1182 RFGLGQASIYDPSTFRVVANAVRTDKPTYGFTRSPGACEVTAFIEHVMDHIATVVNRDPTDVRIANLRN----------- 1250 (1520)
Q Consensus 1182 ~~~~~~~~~Y~ipn~r~~~~~v~TN~p~~ga~Rg~G~~q~~fa~E~~mD~iA~~lg~DP~e~R~~Nl~~----------- 1250 (1520)
....+..++|+|||++++++.|+||++|.+||||||.+|+.|++|++||++|++|||||+|||++|+.+
T Consensus 182 ~~~~~~~~~Y~ipn~~~~~~~v~Tn~~~~g~~Rg~G~~q~~fa~E~~~DelA~~lg~DP~e~R~~N~~~~~~~~~~g~~~ 261 (547)
T PF02738_consen 182 RAGAGADGPYRIPNVRIDARAVYTNTPPAGAFRGFGAPQAAFALESFMDELAEKLGMDPLEFRLKNLIDPGDRTPTGQPY 261 (547)
T ss_dssp HHHHTTTTTB--SEEEEEEEEEE-SSSSBE-STTTTHHHHHHHHHHHHHHHHHHHTS-HHHHHHHHB-GTTEB-TTS-BE
T ss_pred hhhcccCCCcccccEEEEEEeccCCCCCCCcCCCCCHHHHHHHHHHHHHHHHHHhCcChHHHHHhcccccccccccCccc
Confidence 666667899999999999999999999999999999999999999999999999999999999999983
Q ss_pred --chHHH-HHHHHHhccChHHHHHHHHHHhhhhhhhhhhhhhhhhccCCccccccceEEEEeccCCCC----cceEEEEE
Q psy7003 1251 --EDVKK-FYQQFRGSVKYKERRDAIETFNAVRVLISQYSLRHCFQNNRWRKRGISAVVTLFPLGFYD----VSYAILSV 1323 (1520)
Q Consensus 1251 --~~~~~-~~~~~~~~~~~~~r~~~~~~~n~~~~~~~~~~~~~~~~~~~~~krGig~~~~~~~~g~~~----~~~a~v~v 1323 (1520)
..+.+ +++++++..+|++|+++.+.+|. .++|++||+|+++..++.++.. .+.+.|+|
T Consensus 262 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~Gig~~~~~~~~~~~~~~~~~~~a~v~l 326 (547)
T PF02738_consen 262 DSGDYPEDCLEKAAEHSGWRRRQKEVREFGS---------------GNGWRGRGIGLGCAMYGSGTGGGSGDQSSARVRL 326 (547)
T ss_dssp TS--HHHHHHHHHHHHHCHHHHHHHHHHCCH---------------EESSEEEEEEEEEEEEEESTTSGGGSEEEEEEEE
T ss_pred ccCcHHHHHHHHHHhhhchhhhhhHHhhccc---------------cccccccccCCCccccccccccccccCCcEEEEE
Confidence 24666 99999999999999988887776 6789999999999988876543 47899996
Q ss_pred EcCCCeEEEEecCcccCcchHHHHHHHHHHHhCCCCCcEEEecCCCCCCCCCCCCcccccccchHHHHHHHHHHHHHHhh
Q psy7003 1324 FRRDATVAITTSGIEIGQGLHTKVAQACAYELGIPIEKIVLKPAQNNIFPNAANTGGSTASDNAARCILLCCQELKTRLM 1403 (1520)
Q Consensus 1324 ~~~DGsV~i~~g~~e~GQG~~T~~aQiaA~~Lgip~e~I~v~~~dT~~~p~~~~t~gS~~t~~~g~Av~~Ac~~l~~rl~ 1403 (1520)
++||+|+|.+|..|||||++|+++||+||+||||+|+|+|..+||+.+|++.+|+|||++.+.|.|+++||++||+||+
T Consensus 327 -~~DG~v~v~~~~~e~GqG~~T~~~qiaAe~Lgi~~~~V~v~~~dT~~~p~~~~t~gSr~t~~~g~Av~~Aa~~lr~~l~ 405 (547)
T PF02738_consen 327 -NPDGSVTVYTGGVEMGQGSRTALAQIAAEELGIPPEDVRVVSGDTDTTPYDGGTGGSRSTYMSGNAVRKAAEDLREKLL 405 (547)
T ss_dssp --TTS-EEEEES--BSSSSHHHHHHHHHHHHHTS-GGGEEEEECBTTTS-SB--S-TTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred -EeCCCEEEEEecccCCcchhhhHHHHHHHHhCCChhhEEEEeCCCcCCCCCCCCccchhhHhhHHHHHHHHHHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhc-------CCCHHHH--HHHHhhcCceeEEEEEeeccCC--------CCCCCccccceEEEEEEEEECCCCcEEEE
Q psy7003 1404 PYMDK-------GKSWEKT--ISDAFERGVDLQVTKSVSSQQT--------PDLLPMYTIPTAAATEVEVDLLTGQHQIL 1466 (1520)
Q Consensus 1404 ~~~~~-------~~~w~~~--~~~a~~~gv~l~~~~~~~~~~~--------~~~~~~~~~~ga~~aEVEVD~~TG~v~V~ 1466 (1520)
+.+++ ...|++. ...+....+.+.+...+..... .+..+.+++|+++++|||||++||+++|+
T Consensus 406 ~~Aa~~~~~~~~~l~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~eVeVD~~TG~v~v~ 485 (547)
T PF02738_consen 406 EIAAEILGVDPEDLELEDGRVISPAKGVSISEAAIAAYANPPTGFDPGTGGYGPPASYYSFGAHFAEVEVDTETGEVRVL 485 (547)
T ss_dssp HHHHHHTTSSGGGEECHCHETHHHHHHEEHHHEEEHHHCTTSTTCETTTTEESBSSSEEEEEEEEEEEEEETTTSEEEEE
T ss_pred HHHHHhcccccchhhhhhhccccccccccccccccccccccccccccccccccCCccceeeeeeecccccccccccccce
Confidence 98765 3455555 4444444444443332221110 12345678999999999999999999999
Q ss_pred EEEEEEecCcccChHHHhHHhHhHHHHHHHHHHccceeeeCCCceeecCCCCC
Q psy7003 1467 RVDILEDTGQSINPAIDIGQIQGAFIMGIGLWTFEHQIHDKRTGALLTNRTWV 1519 (1520)
Q Consensus 1467 r~~~~~D~G~~INP~~~~GQIeGg~vqGiG~aL~Ee~~~d~~~G~llt~~~w~ 1519 (1520)
|+++++|||++|||.+++||||||++||||++|+|++.|| ++|+++|+|.|.
T Consensus 486 ~~~~~~D~G~~iNP~~v~gQi~Gg~~~Glg~al~E~~~~d-~~G~~~~~~~~d 537 (547)
T PF02738_consen 486 RVVAAHDCGRVINPDIVEGQIEGGIVQGLGYALYEELVYD-ENGRPLNPNFAD 537 (547)
T ss_dssp EEEEEEEEBS-SBHHHHHHHHHHHHHHHHHHHHT--BEBT-TTSEBSTSSTTT
T ss_pred eeeeeccCCcccCHHHHhhhccccHHHHHHHHhcCCeEEC-CCCcCCCCChhh
Confidence 9999999999999999999999999999999999999999 799999999875
No 16
>TIGR02963 xanthine_xdhA xanthine dehydrogenase, small subunit. Members of this protein family are the small subunit (or, in eukaryotes, the N-terminal domain) of xanthine dehydrogenase, an enzyme of purine catabolism via urate. The small subunit contains both an FAD and a 2Fe-2S cofactor. Aldehyde oxidase (retinal oxidase) appears to have arisen as a neofunctionalization among xanthine dehydrogenases in eukaryotes and
Probab=100.00 E-value=1e-76 Score=718.37 Aligned_cols=338 Identities=28% Similarity=0.434 Sum_probs=286.5
Q ss_pred EEEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEECCccCCCCcccccccccchhhHHhcCCcE
Q psy7003 22 VRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTSSHPVTGVDSTYSVNACLVLVHMCGGWA 101 (1520)
Q Consensus 22 ~~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~~~~~~~~~~~~~~~v~scl~~~~~~~g~~ 101 (1520)
|+|+|||+.++++ +++|+++|+||||+++||+|||.||++|+||||||+|.++|+.+ +++|++|||||+|+++++|++
T Consensus 1 i~~~~Ng~~~~~~-~~~~~~~ll~~lR~~~~l~g~k~gC~~G~CGaCtv~~~~~~~~~-~~~~~~v~sCl~~~~~~~g~~ 78 (467)
T TIGR02963 1 IRFFLNGETVTLS-DVDPTRTLLDYLREDAGLTGTKEGCAEGDCGACTVVVGELVDGG-KLRYRSVNACIQFLPSLDGKA 78 (467)
T ss_pred CEEEECCEEEEee-cCCCCCCHHHHHHHhcCCCCCCcccCCCCCCceEEEEEecCCCC-cccceEEehhhhhHHhcCCCE
Confidence 5799999999984 69999999999999999999999999999999999997777656 899999999999999999999
Q ss_pred EEEecCCCCCCCCCCHHHHHHHHhCCCCCCCCchhHHHHHhhhhccccccccCCcchhhHHhhhhhccCCCcchhHHHHH
Q psy7003 102 ITTVEGLGSKKKGYHNVQTRLATMNGSQCGYCSPGMVMAMYSRHRLTASTMCGHNFTKTLLLQMYCIFLPPFSLEVLFVI 181 (1520)
Q Consensus 102 i~T~eg~~~~~~~~h~vq~~~~~~~~~qcg~ctpg~vm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (1520)
|+|||||+++++.+||||++|+++|++|||||||||||++|+
T Consensus 79 i~TvEgl~~~~~~l~~~q~a~~~~~~~QCG~CtpG~vm~~~~-------------------------------------- 120 (467)
T TIGR02963 79 VVTVEDLRQPDGRLHPVQQAMVECHGSQCGFCTPGFVMSLYA-------------------------------------- 120 (467)
T ss_pred EEecCCCCCCCCCCCHHHHHHHHcCCCcCCCCchHHHHHHHH--------------------------------------
Confidence 999999997556799999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHhcCCccCCCCcHHHHHHHHHhhhhcCccccccccccccccccccccccccccccc
Q psy7003 182 LLIFVIVSFLEGKKYKVTKSEVEGALGGNICRCTGFRPILDAFQSFSCDASDSVQRKCADIEVRGKRDFISHESLGTQLL 261 (1520)
Q Consensus 182 ~~~~~~~~~l~~~~~~~~~~~i~~~~~gn~crctgy~~i~~a~~~~~~~~~~~~~~~~~d~e~~~~~~~~~~~~~~~~~~ 261 (1520)
||++++ .||++||+++|+||+||||||++|++|+ +++.+.. |.+.
T Consensus 121 --------ll~~~~-~~~~~~i~~~l~gnlCRCtgy~~i~~a~-~~~~~~~------~~~~------------------- 165 (467)
T TIGR02963 121 --------LYKNSP-APSRADIEDALQGNLCRCTGYRPILDAA-EAAFDYP------CSDP------------------- 165 (467)
T ss_pred --------HHhcCC-CCCHHHHHHHhcCCcccCCCCHHHHHHH-HHHHhCC------CCCc-------------------
Confidence 888887 7999999999999999999999999999 4553421 2110
Q ss_pred ccccccchhhhhhhhhcccccccccccccccCCCcceEEEECCEEEEecccCCCCcchhHHHHhhhcccCccccccCCCc
Q psy7003 262 DWAFDTLVFSVLEFRLATLIIVPILLPRLFSDTSSTVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGC 341 (1520)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~f~~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~~g~c 341 (1520)
T Consensus 166 -------------------------------------------------------------------------------- 165 (467)
T TIGR02963 166 -------------------------------------------------------------------------------- 165 (467)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cceeeeeccCCCcccccccccccccccccccCccccccCCccchhhhhcccCCCCcccccccccccccccccccccCCCC
Q psy7003 342 GVCTVTVTSSHPVTGVDSTYSVNACGDRCFTRNICRCTGFRPILDAFQSFSCDASDSVQRKCADIEVRGKRDFISHEGLP 421 (1520)
Q Consensus 342 GactV~v~~~hpvq~~~~~~~~~~Cg~~C~~gNLCRCTgyrpIlda~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (1520)
T Consensus 166 -------------------------------------------------------------------------------- 165 (467)
T TIGR02963 166 -------------------------------------------------------------------------------- 165 (467)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCChhhhcccccccccCCCCCCccccccccCCCCccceeecCCCCCCcccccccccccccccccccccccCCCCchhh
Q psy7003 422 EPEYDPTYRKNLAVSLFYKSHINPSIHNRTVMGRGDVRSLFFGSSTLGEVPTRYKLDLMGSCKLKTKLDQSEDSNDLDTC 501 (1520)
Q Consensus 422 ~~~~~~~~~~~l~~~~~y~~s~epi~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 501 (1520)
|++.++++| |+|.... +...+.+.
T Consensus 166 -----------------~~~~~~~~~-~~l~~~~-~~~~~~~~------------------------------------- 189 (467)
T TIGR02963 166 -----------------LDADRAPII-ERLRALR-AGETVELN------------------------------------- 189 (467)
T ss_pred -----------------CCcchhhhh-hHHHhcC-CCcceeec-------------------------------------
Confidence 001111112 1111000 00001111
Q ss_pred hhhhccccccccCccEEEEcCCHHHHHHHHhcCCCCCCcEEEEecchhhhccCCC--CCCeeeeCCCcccccceEEeCCe
Q psy7003 502 LIELALTPVNVNVEGIWYIVTEVREIFEIFDGLEANQTYMLVGGNTGYGVYRPRV--PVDVYIQIRDIKELRQIFTRNGY 579 (1520)
Q Consensus 502 ~~~~a~~~~~i~~~~~~~rPtSLeEal~ll~~~p~~~~a~lVAGGTdLgv~~k~~--~~~~lIdIs~I~EL~~I~~~~~~ 579 (1520)
.++.+||+|+|++|+++++++++ +++++|||||++++++.+ .++++||+++|+||+.|+.++++
T Consensus 190 -----------~~~~~~~~P~sl~Ea~~ll~~~~---~a~lvAGGTdl~~~~~~~~~~~~~lIdl~~I~EL~~I~~~~~~ 255 (467)
T TIGR02963 190 -----------FGGERFIAPTTLDDLAALKAAHP---DARIVAGSTDVGLWVTKQMRDLPDVIYVGQVAELKRIEETDDG 255 (467)
T ss_pred -----------CCCceEECCCCHHHHHHHHhhCC---CCEEEecCcchHHHHhcCCCCCCeEEECCCChhhccEEEcCCE
Confidence 13468999999999999999998 899999999999987544 44899999999999999999999
Q ss_pred EEEccccCHHHHHHhhhhccCCchhhhhHHHHHHHHHhhcchhHhccc---ccCCCCCCCCCcc-----CCcEEEEEecC
Q psy7003 580 VLMGSATTLTEAMDYFDRTSKTDANFEYMRIMKDHLEQVAHYAVRNFA---LGLSTTEVSPSLW-----SGARMIQIERA 651 (1520)
Q Consensus 580 L~IGA~vTlsel~e~L~~~~~~~~~~~~~~~La~al~~IAs~qIRN~A---GNL~~asp~SDL~-----lgA~V~I~s~~ 651 (1520)
|+|||++|++++.+.+ .+.+|.|.+++++||++||||+| |||++++|.||++ +||+|+|.+.+
T Consensus 256 l~IGA~vT~~el~~~l---------~~~~p~L~~a~~~ias~qIRN~aTiGGNI~~asP~sD~~p~LlALdA~v~l~~~~ 326 (467)
T TIGR02963 256 IEIGAAVTLTDAYAAL---------AKRYPELGELLRRFASLQIRNAGTLGGNIANGSPIGDSPPALIALGARLTLRKGE 326 (467)
T ss_pred EEEecCCcHHHHHHHH---------HHHhHHHHHHHHHhCCHHHcCceecccccccCCCchHHHHHHHHcCCEEEEEcCC
Confidence 9999999999998644 34678899999999999999999 9999999999999 99999999999
Q ss_pred ceee--ccccc---------cCce-eeeeeCCCC
Q psy7003 652 MSQG--SEDFE---------TKQN-LWPLTKPLP 673 (1520)
Q Consensus 652 g~R~--l~dFf---------~~EI-tsI~IP~~~ 673 (1520)
|.|. ++||| ++|| ++|.||...
T Consensus 327 G~R~vpl~dF~~g~~kt~L~~~EiI~~I~iP~~~ 360 (467)
T TIGR02963 327 GRRTLPLEDFFIDYGKTDRQPGEFVEALHVPRPT 360 (467)
T ss_pred CcEEEeHHHhhcccccccCCCCceEEEEEecCCC
Confidence 9888 89999 5799 999999653
No 17
>COG4630 XdhA Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A [Nucleotide transport and metabolism]
Probab=100.00 E-value=2.7e-72 Score=629.08 Aligned_cols=379 Identities=26% Similarity=0.413 Sum_probs=317.7
Q ss_pred ceEEEEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEECCccCCCCc-ccccccccchhhHHhc
Q psy7003 19 SSTVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTSSHPVTGV-DSTYSVNACLVLVHMC 97 (1520)
Q Consensus 19 ~~~~~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~~~~~~~~~~-~~~~~v~scl~~~~~~ 97 (1520)
..+|+|.+||+.+.+. +|+|.+|||||||.+.+|+|||.||.||.||||||+|... ..|+ +++.|||+|+..+.++
T Consensus 6 ~~~irf~lN~~~~~l~-~v~P~~TlLd~LR~d~~ltGtKEGCAEGDCGACTVlVgrl--~~g~~l~yeSVNACirfl~sL 82 (493)
T COG4630 6 RNTIRFLLNGETRVLS-DVPPTTTLLDYLRLDRRLTGTKEGCAEGDCGACTVLVGRL--VDGGSLRYESVNACIRFLGSL 82 (493)
T ss_pred cceeEEEecCceEEee-cCCcchHHHHHHHHhcccccccccccCCCcCceEEEEEee--cCCCceeeeehhHHHHHHhhc
Confidence 4679999999999985 9999999999999888999999999999999999999875 4455 8999999999999999
Q ss_pred CCcEEEEecCCCCCCCCCCHHHHHHHHhCCCCCCCCchhHHHHHhhhhccccccccCCcchhhHHhhhhhccCCCcchhH
Q psy7003 98 GGWAITTVEGLGSKKKGYHNVQTRLATMNGSQCGYCSPGMVMAMYSRHRLTASTMCGHNFTKTLLLQMYCIFLPPFSLEV 177 (1520)
Q Consensus 98 ~g~~i~T~eg~~~~~~~~h~vq~~~~~~~~~qcg~ctpg~vm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (1520)
+|++|.|||+|+...+.+|||||+|+++|||||||||||||||+|+
T Consensus 83 ~G~hvvTvE~L~~~~g~LHpVQqamvd~hGSQCGfCTPGFVmSLya---------------------------------- 128 (493)
T COG4630 83 DGTHVVTVEHLRGQDGTLHPVQQAMVDFHGSQCGFCTPGFVMSLYA---------------------------------- 128 (493)
T ss_pred CCceEEEehhhcCCCCCcCHHHHHHHhccCCccCCcCchHHHHHHH----------------------------------
Confidence 9999999999998766699999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCHHHHHHHhcCCccCCCCcHHHHHHHHHhhhhcCccccccccccccccccccccccccc
Q psy7003 178 LFVILLIFVIVSFLEGKKYKVTKSEVEGALGGNICRCTGFRPILDAFQSFSCDASDSVQRKCADIEVRGKRDFISHESLG 257 (1520)
Q Consensus 178 ~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~gn~crctgy~~i~~a~~~~~~~~~~~~~~~~~d~e~~~~~~~~~~~~~~ 257 (1520)
|..+.+ .|+.+.|+++|+||+||||||+||++|.+..++-... +.+|
T Consensus 129 ------------l~~~~~-~P~~a~i~kALqGNLCRCTGY~pI~~AA~~~~a~~~~-------a~fD------------- 175 (493)
T COG4630 129 ------------LWMNSP-TPSRAAIEKALQGNLCRCTGYRPIIRAAEAIAALGPA-------AGFD------------- 175 (493)
T ss_pred ------------HHhcCC-CCchhHHHHHhhCCcccccCchHHHHHHHHHhccCCc-------ccCC-------------
Confidence 555565 7999999999999999999999999999887744211 1111
Q ss_pred ccccccccccchhhhhhhhhcccccccccccccccCCCcceEEEECCEEEEecccCCCCcchhHHHHhhhcccCcccccc
Q psy7003 258 TQLLDWAFDTLVFSVLEFRLATLIIVPILLPRLFSDTSSTVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCR 337 (1520)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~f~~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~ 337 (1520)
++...+.+ +..-|
T Consensus 176 ---------Pl~~~R~~--------------------------------------------~~~~L-------------- 188 (493)
T COG4630 176 ---------PLAARRTA--------------------------------------------ITARL-------------- 188 (493)
T ss_pred ---------hhhhhHHH--------------------------------------------HHHHH--------------
Confidence 00000000 00000
Q ss_pred CCCccceeeeeccCCCcccccccccccccccccccCccccccCCccchhhhhcccCCCCccccccccccccccccccccc
Q psy7003 338 EGGCGVCTVTVTSSHPVTGVDSTYSVNACGDRCFTRNICRCTGFRPILDAFQSFSCDASDSVQRKCADIEVRGKRDFISH 417 (1520)
Q Consensus 338 ~g~cGactV~v~~~hpvq~~~~~~~~~~Cg~~C~~gNLCRCTgyrpIlda~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (1520)
+-+.
T Consensus 189 --------------------------------------------~A~~-------------------------------- 192 (493)
T COG4630 189 --------------------------------------------RALR-------------------------------- 192 (493)
T ss_pred --------------------------------------------hhcc--------------------------------
Confidence 0000
Q ss_pred CCCCCCCCChhhhcccccccccCCCCCCccccccccCCCCccceeecCCCCCCcccccccccccccccccccccccCCCC
Q psy7003 418 EGLPEPEYDPTYRKNLAVSLFYKSHINPSIHNRTVMGRGDVRSLFFGSSTLGEVPTRYKLDLMGSCKLKTKLDQSEDSND 497 (1520)
Q Consensus 418 ~~~~~~~~~~~~~~~l~~~~~y~~s~epi~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 497 (1520)
. ...+..+
T Consensus 193 -------------------------------------~--~e~v~~~--------------------------------- 200 (493)
T COG4630 193 -------------------------------------D--TETVEVG--------------------------------- 200 (493)
T ss_pred -------------------------------------C--CcEEEec---------------------------------
Confidence 0 0000000
Q ss_pred chhhhhhhccccccccCccEEEEcCCHHHHHHHHhcCCCCCCcEEEEecchhhhc--cCCCCCCeeeeCCCcccccceEE
Q psy7003 498 LDTCLIELALTPVNVNVEGIWYIVTEVREIFEIFDGLEANQTYMLVGGNTGYGVY--RPRVPVDVYIQIRDIKELRQIFT 575 (1520)
Q Consensus 498 ~~~~~~~~a~~~~~i~~~~~~~rPtSLeEal~ll~~~p~~~~a~lVAGGTdLgv~--~k~~~~~~lIdIs~I~EL~~I~~ 575 (1520)
.+...+|.|.+++++.++++++| ++++|||+||+++| ++.+.+..+|.+++++||+.|++
T Consensus 201 ---------------~~~~r~~~P~~l~D~a~l~aa~P---~AtivAGsTDvgLwVtk~mr~l~~vi~v~~l~eL~~i~~ 262 (493)
T COG4630 201 ---------------SGDDRFIVPATLADFADLLAAHP---GATIVAGSTDVGLWVTKQMRDLNPVIFVGHLAELRRIEV 262 (493)
T ss_pred ---------------CCCceeEeeccHHHHHHHHhhCC---CCEEEecCcchhhHHHHHHhhcCCeEEecchhhhheeee
Confidence 12457999999999999999999 99999999999998 44667789999999999999999
Q ss_pred eCCeEEEccccCHHHHHHhhhhccCCchhhhhHHHHHHHHHhhcchhHhccc---ccCCCCCCCCCcc-----CCcEEEE
Q psy7003 576 RNGYVLMGSATTLTEAMDYFDRTSKTDANFEYMRIMKDHLEQVAHYAVRNFA---LGLSTTEVSPSLW-----SGARMIQ 647 (1520)
Q Consensus 576 ~~~~L~IGA~vTlsel~e~L~~~~~~~~~~~~~~~La~al~~IAs~qIRN~A---GNL~~asp~SDL~-----lgA~V~I 647 (1520)
..+.|+|||++||++....|. ..+|.|.+...+||+.||||+| |||.|+||+.|.+ |||+|++
T Consensus 263 ~~~~l~iGAgvt~t~a~~~la---------~~~P~l~~L~~r~gg~qvRN~gTlGGNIangSPIGDtPPaLIALgA~ltL 333 (493)
T COG4630 263 STGGLEIGAGVTYTQAYRALA---------GRYPALGELWDRFGGEQVRNMGTLGGNIANGSPIGDTPPALIALGATLTL 333 (493)
T ss_pred cCCcEEEccCccHHHHHHHHH---------hhCchHHHHHHHhcchhhhccccccccccCCCcCCCCCchhhhcCcEEEE
Confidence 999999999999999988554 4678999999999999999999 9999999999988 9999999
Q ss_pred EecCceee--ccccc---------cCce-eeeeeCCCCcc--------------------------------cccccccc
Q psy7003 648 IERAMSQG--SEDFE---------TKQN-LWPLTKPLPKI--------------------------------DAITQCAG 683 (1520)
Q Consensus 648 ~s~~g~R~--l~dFf---------~~EI-tsI~IP~~~~~--------------------------------~~arIa~G 683 (1520)
++.++.|+ +++|| ++|+ .+++||.+.+. .++||+||
T Consensus 334 r~g~~~RtlPLe~~Fi~Y~kqdr~pGEfVe~v~vP~~~~~~rfa~yKisKRrdeDISAv~~Af~l~Ldg~~V~~arIa~G 413 (493)
T COG4630 334 RSGDGRRTLPLEDYFIAYGKQDRQPGEFVEAVRVPLPAPSERFAAYKISKRRDEDISAVCGAFALDLDGGRVADARIAFG 413 (493)
T ss_pred EecCCcccccHHHHHHHhhhhccCcchhhhheecCCCCcchhhhhhhhhhhccchHHHHHhHheeeecCCeeeeeeeecC
Confidence 99999998 99999 7899 99999987643 68899999
Q ss_pred -----------------------------------cccccCCCCCCcHHHHH--------HHHHhhcCCC
Q psy7003 684 -----------------------------------EAEYVNDLPQLSEEYFA--------SVVLAERGPA 710 (1520)
Q Consensus 684 -----------------------------------El~p~~d~P~gS~EYRr--------KF~L~v~~~~ 710 (1520)
++.|..|. |+|+|||. +|||+..+..
T Consensus 414 GmAaTPkRA~~~EaAL~Gk~wteatve~A~aAl~~D~tPltD~-RAsaeYR~l~a~nlL~RfflEt~~~~ 482 (493)
T COG4630 414 GMAATPKRASEVEAALLGKPWTEATVEAAAAALAGDFTPLTDM-RASAEYRALTAKNLLRRFFLETQGEA 482 (493)
T ss_pred ccccCccchHHHHHHHcCCCccHHHHHHHHHHHhcCCCcccch-hhhHHHHHHHHHHHHHHHhhhccCCc
Confidence 67888888 99999999 7888877653
No 18
>PRK09908 xanthine dehydrogenase subunit XdhC; Provisional
Probab=100.00 E-value=4.2e-50 Score=417.62 Aligned_cols=153 Identities=33% Similarity=0.663 Sum_probs=142.3
Q ss_pred CCCceEEEEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEECCccCCCCcccccccccchhhHH
Q psy7003 16 SDTSSTVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTSSHPVTGVDSTYSVNACLVLVH 95 (1520)
Q Consensus 16 ~~~~~~~~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~~~~~~~~~~~~~~~v~scl~~~~ 95 (1520)
++..+.|+|+|||+.+++ +++|+++|+||||+. ||+|+|.||++|.||||||+|||. +||||++|+.
T Consensus 3 ~~~~~~i~~~vNG~~~~~--~~~~~~~Ll~~LR~~-gltgtK~GC~~G~CGACtVlvdg~----------~v~SCl~~a~ 69 (159)
T PRK09908 3 HSETITIECTINGMPFQL--HAAPGTPLSELLREQ-GLLSVKQGCCVGECGACTVLVDGT----------AIDSCLYLAA 69 (159)
T ss_pred CCCceeEEEEECCEEEEE--ecCCCCcHHHHHHHc-CCCCCCCCcCCCCCCCcEEEECCc----------EeehhHhhHH
Confidence 445567999999999999 799999999999986 999999999999999999999996 9999999999
Q ss_pred hcCCcEEEEecCCCCCCCCCCHHHHHHHHhCCCCCCCCchhHHHHHhhhhccccccccCCcchhhHHhhhhhccCCCcch
Q psy7003 96 MCGGWAITTVEGLGSKKKGYHNVQTRLATMNGSQCGYCSPGMVMAMYSRHRLTASTMCGHNFTKTLLLQMYCIFLPPFSL 175 (1520)
Q Consensus 96 ~~~g~~i~T~eg~~~~~~~~h~vq~~~~~~~~~qcg~ctpg~vm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (1520)
+++|++|+|||||+. .+.+||||++|+++|++|||||||||||++|+
T Consensus 70 ~~~G~~V~TiEGl~~-~~~l~pvQ~Af~~~~a~QCGyCtPG~ims~~a-------------------------------- 116 (159)
T PRK09908 70 WAEGKEIRTLEGEAK-GGKLSHVQQAYAKSGAVQCGFCTPGLIMATTA-------------------------------- 116 (159)
T ss_pred HhCCCEEEeecCCCC-CCCCCHHHHHHHHcCCCcCCCCCccHHHHHHH--------------------------------
Confidence 999999999999996 45799999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhcCC-CCCCHHHHHHHhcCCccCCCCcHHHHHHHHHhh
Q psy7003 176 EVLFVILLIFVIVSFLEGKK-YKVTKSEVEGALGGNICRCTGFRPILDAFQSFS 228 (1520)
Q Consensus 176 ~~~~~~~~~~~~~~~l~~~~-~~~~~~~i~~~~~gn~crctgy~~i~~a~~~~~ 228 (1520)
||++++ ..+|++||+++|+|||||||||++|++|++.+.
T Consensus 117 --------------Ll~~~~~~~~s~~eI~~al~GNlCRCTGY~~I~~Av~~~~ 156 (159)
T PRK09908 117 --------------MLAKPREKPLTITEIRRGLAGNLCRCTGYQMIVNTVLDCE 156 (159)
T ss_pred --------------HHHcCCCCCCCHHHHHHHHcCCccCCCCCHHHHHHHHHHh
Confidence 788764 246999999999999999999999999998764
No 19
>TIGR03193 4hydroxCoAred 4-hydroxybenzoyl-CoA reductase, gamma subunit. 4-hydroxybenzoyl-CoA reductase converts 4-hydroxybenzoyl-CoA to benzoyl-CoA, a common intermediate in the degradation of aromatic compounds. This protein family represents the gamma chain of this three-subunit enzyme.
Probab=100.00 E-value=3.9e-50 Score=413.92 Aligned_cols=147 Identities=37% Similarity=0.703 Sum_probs=140.7
Q ss_pred EEEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEECCccCCCCcccccccccchhhHHhcCCcE
Q psy7003 22 VRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTSSHPVTGVDSTYSVNACLVLVHMCGGWA 101 (1520)
Q Consensus 22 ~~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~~~~~~~~~~~~~~~v~scl~~~~~~~g~~ 101 (1520)
|+|+|||+++++ +++|+++|+|+||++++|+|+|.||++|.||||||+|||. +||||++|+.+++|++
T Consensus 2 i~~~vNG~~~~~--~~~~~~~Ll~~LR~~lgltg~K~gC~~G~CGACtVlvdg~----------~v~SCl~~~~~~~G~~ 69 (148)
T TIGR03193 2 LRLTVNGRWRED--AVADNMLLVDYLRDTVGLTGTKQGCDGGECGACTVLVDGR----------PRLACSTLAHRVAGRK 69 (148)
T ss_pred EEEEECCEEEEe--ecCCCCcHHHHHHHhcCCCCCCCCCCCCCCCCCEEEECCe----------EeeccHhhHhhcCCCc
Confidence 789999999998 7999999999999999999999999999999999999996 9999999999999999
Q ss_pred EEEecCCCCCCCCCCHHHHHHHHhCCCCCCCCchhHHHHHhhhhccccccccCCcchhhHHhhhhhccCCCcchhHHHHH
Q psy7003 102 ITTVEGLGSKKKGYHNVQTRLATMNGSQCGYCSPGMVMAMYSRHRLTASTMCGHNFTKTLLLQMYCIFLPPFSLEVLFVI 181 (1520)
Q Consensus 102 i~T~eg~~~~~~~~h~vq~~~~~~~~~qcg~ctpg~vm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (1520)
|+|||||+. .+.+||+|++|+++|++|||||||||||++++
T Consensus 70 V~TiEgl~~-~~~l~pvq~af~~~~a~QCGfCtPG~vms~~~-------------------------------------- 110 (148)
T TIGR03193 70 VETVEGLAT-NGRLSRLQQAFHERLGTQCGFCTPGMIMAAEA-------------------------------------- 110 (148)
T ss_pred EEEeCCCCC-CCCCCHHHHHHHHcCCCcCCCCCccHHHHHHH--------------------------------------
Confidence 999999985 45799999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHhcCCccCCCCcHHHHHHHHHhh
Q psy7003 182 LLIFVIVSFLEGKKYKVTKSEVEGALGGNICRCTGFRPILDAFQSFS 228 (1520)
Q Consensus 182 ~~~~~~~~~l~~~~~~~~~~~i~~~~~gn~crctgy~~i~~a~~~~~ 228 (1520)
||+++| .||++||+++|+|||||||||++|++|++.++
T Consensus 111 --------ll~~~p-~ps~~ei~~al~GnLCRCTGY~~I~~Av~~aa 148 (148)
T TIGR03193 111 --------LLRRNP-SPSRDEIRAALAGNLCRCTGYVKIIESVEAAA 148 (148)
T ss_pred --------HHHcCC-CCCHHHHHHHHcCCccCCCCCHHHHHHHHHhC
Confidence 888888 79999999999999999999999999998764
No 20
>COG2080 CoxS Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion]
Probab=100.00 E-value=8.6e-50 Score=410.68 Aligned_cols=151 Identities=40% Similarity=0.728 Sum_probs=145.4
Q ss_pred eEEEEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEECCccCCCCcccccccccchhhHHhcCC
Q psy7003 20 STVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTSSHPVTGVDSTYSVNACLVLVHMCGG 99 (1520)
Q Consensus 20 ~~~~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~~~~~~~~~~~~~~~v~scl~~~~~~~g 99 (1520)
+.|+|+|||+++++ +++|+++|+|+|||+++|+|||+||+.|.||||||+|||. +|+||++|+++++|
T Consensus 2 ~~i~ltvNG~~~~~--~~~p~~~Ll~~LRd~l~ltgtk~GC~~g~CGACtVlvDG~----------~v~SCl~~a~~~~G 69 (156)
T COG2080 2 MPITLTVNGEPVEL--DVDPRTPLLDVLRDELGLTGTKKGCGHGQCGACTVLVDGE----------AVNSCLTLAVQAEG 69 (156)
T ss_pred CcEEEEECCeEEEE--EeCCCChHHHHHHHhcCCCCcCCCCCCccCCceEEEECCe----------EehHHHHHHHHhCC
Confidence 67999999999999 7999999999999999999999999999999999999996 99999999999999
Q ss_pred cEEEEecCCCCCCCCCCHHHHHHHHhCCCCCCCCchhHHHHHhhhhccccccccCCcchhhHHhhhhhccCCCcchhHHH
Q psy7003 100 WAITTVEGLGSKKKGYHNVQTRLATMNGSQCGYCSPGMVMAMYSRHRLTASTMCGHNFTKTLLLQMYCIFLPPFSLEVLF 179 (1520)
Q Consensus 100 ~~i~T~eg~~~~~~~~h~vq~~~~~~~~~qcg~ctpg~vm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (1520)
++|||||||+.++..+||+|++|.+++++|||||||||||++++
T Consensus 70 ~~ItTiEGl~~~~~~l~~vQ~Af~e~~~~QCGyCtpG~Imsa~~------------------------------------ 113 (156)
T COG2080 70 AEITTIEGLAKKDGGLHPVQQAFLEHDAFQCGYCTPGQIMSATA------------------------------------ 113 (156)
T ss_pred CeEEEeecccCCCCCcCHHHHHHHHcCCCcCCCCcHHHHHHHHH------------------------------------
Confidence 99999999996666789999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCHHHHHHHhcCCccCCCCcHHHHHHHHHhhh
Q psy7003 180 VILLIFVIVSFLEGKKYKVTKSEVEGALGGNICRCTGFRPILDAFQSFSC 229 (1520)
Q Consensus 180 ~~~~~~~~~~~l~~~~~~~~~~~i~~~~~gn~crctgy~~i~~a~~~~~~ 229 (1520)
||++++ .||++||+++|+|||||||||.+|++|++.++.
T Consensus 114 ----------lL~~~~-~ps~~eI~~~lsGnlCRCt~Y~~I~~Ai~~aa~ 152 (156)
T COG2080 114 ----------LLDRNP-APTDEEIREALSGNLCRCTGYQNIVAAILDAAE 152 (156)
T ss_pred ----------HHHhCC-CCCHHHHHHHHhcCccccCCHHHHHHHHHHHHH
Confidence 899988 899999999999999999999999999998874
No 21
>TIGR03198 pucE xanthine dehydrogenase E subunit. This gene has been characterized in B. subtilis as the Iron-sulfur cluster binding-subunit of xanthine dehydrogenase (pucE), acting in conjunction with pucC, the FAD-binding subunit and pucD, the molybdopterin binding subunit. The more common XDH complex (GenProp0640) includes the xdhA gene as the Fe-S cluster binding component.
Probab=100.00 E-value=6.7e-49 Score=407.79 Aligned_cols=148 Identities=36% Similarity=0.723 Sum_probs=141.6
Q ss_pred EEEEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEECCccCCCCcccccccccchhhHHhcCCc
Q psy7003 21 TVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTSSHPVTGVDSTYSVNACLVLVHMCGGW 100 (1520)
Q Consensus 21 ~~~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~~~~~~~~~~~~~~~v~scl~~~~~~~g~ 100 (1520)
.|+|+|||+++++ +++|+++|+++||++++|+|+|.||++|.||||||+|||. +|+||++|+.+++|+
T Consensus 3 ~i~f~vNG~~~~~--~~~~~~~Ll~~LR~~~~ltgtK~gC~~G~CGACtVlvdG~----------~v~SCl~~~~~~~G~ 70 (151)
T TIGR03198 3 QFRFTVNGQAWEV--AAVPTTRLSDLLRKELQLTGTKVSCGIGRCGACSVLIDGK----------LANACLTMAYQADGH 70 (151)
T ss_pred cEEEEECCEEEEe--ecCCCcHHHHHHHhccCCCCCCCCCCCCcCCccEEEECCc----------EEechHHHHHHhcCC
Confidence 4899999999998 7899999999999999999999999999999999999996 999999999999999
Q ss_pred EEEEecCCCCCCCCCCHHHHHHHHhCCCCCCCCchhHHHHHhhhhccccccccCCcchhhHHhhhhhccCCCcchhHHHH
Q psy7003 101 AITTVEGLGSKKKGYHNVQTRLATMNGSQCGYCSPGMVMAMYSRHRLTASTMCGHNFTKTLLLQMYCIFLPPFSLEVLFV 180 (1520)
Q Consensus 101 ~i~T~eg~~~~~~~~h~vq~~~~~~~~~qcg~ctpg~vm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (1520)
+|+|||||+. +.+||+|++|+++|++|||||||||||++++
T Consensus 71 ~v~TiEgl~~--~~l~pvQ~af~~~~a~QCGfCtpG~im~~~~------------------------------------- 111 (151)
T TIGR03198 71 EITTIEGIAE--NELDPCQTAFLEEGGFQCGYCTPGMVVALKA------------------------------------- 111 (151)
T ss_pred EEEecCCcCC--CCCCHHHHHHHHcCCCcCCCCCccHHHHHHH-------------------------------------
Confidence 9999999973 4699999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCCHHHHHHHhcCCccCCCCcHHHHHHHHHhhh
Q psy7003 181 ILLIFVIVSFLEGKKYKVTKSEVEGALGGNICRCTGFRPILDAFQSFSC 229 (1520)
Q Consensus 181 ~~~~~~~~~~l~~~~~~~~~~~i~~~~~gn~crctgy~~i~~a~~~~~~ 229 (1520)
||+++| .||++||+++|+|||||||||++|++|+++++.
T Consensus 112 ---------ll~~~p-~p~~~ei~~al~gnlCRCtgY~~I~~Av~~~~~ 150 (151)
T TIGR03198 112 ---------LFRETP-QPSDEDMEEGLSGNLCRCTGYGGIIRSACRIRR 150 (151)
T ss_pred ---------HHHcCC-CCCHHHHHHHHcCCCcCCCCCHHHHHHHHHHhc
Confidence 888888 799999999999999999999999999999874
No 22
>PRK11433 aldehyde oxidoreductase 2Fe-2S subunit; Provisional
Probab=100.00 E-value=9.2e-48 Score=417.25 Aligned_cols=167 Identities=37% Similarity=0.638 Sum_probs=144.7
Q ss_pred ceEEEEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEECCccCCCCcccccccccchhhHHhcC
Q psy7003 19 SSTVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTSSHPVTGVDSTYSVNACLVLVHMCG 98 (1520)
Q Consensus 19 ~~~~~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~~~~~~~~~~~~~~~v~scl~~~~~~~ 98 (1520)
.+.|+|+|||+++.+ +++|+++|+|+||++++|+|+|+||++|.||+|||+|||. ++||||+++++++
T Consensus 49 ~~~i~~~VNG~~~~~--~v~~~~tLLd~LR~~l~ltGtK~GC~~G~CGACTVlVdG~----------~v~SCl~la~~~~ 116 (217)
T PRK11433 49 ISPVTLKVNGKTEQL--EVDTRTTLLDALREHLHLTGTKKGCDHGQCGACTVLVNGR----------RLNACLTLAVMHQ 116 (217)
T ss_pred CceEEEEECCEEEEE--ecCCCCcHHHHHHHhcCCCCCCCCCCCCCcCceEEEECCE----------EeeeeeeehhhcC
Confidence 356999999999999 7999999999999999999999999999999999999996 8999999999999
Q ss_pred CcEEEEecCCCCCCCCCCHHHHHHHHhCCCCCCCCchhHHHHHhhhhccccccccCCcchhhHHhhhhhccCCCcchhHH
Q psy7003 99 GWAITTVEGLGSKKKGYHNVQTRLATMNGSQCGYCSPGMVMAMYSRHRLTASTMCGHNFTKTLLLQMYCIFLPPFSLEVL 178 (1520)
Q Consensus 99 g~~i~T~eg~~~~~~~~h~vq~~~~~~~~~qcg~ctpg~vm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (1520)
|++|+|||||+. .+.+||+|++|++++++|||||||||||++++ |+.+...+.++..+.
T Consensus 117 G~~ItTiEGL~~-~~~lhpvQ~Af~~~~a~QCGyCTPG~imsa~a---lL~~~~~~~~~~~~~----------------- 175 (217)
T PRK11433 117 GAEITTIEGLGS-PDNLHPMQAAFVKHDGFQCGYCTPGQICSSVA---VLKEIKDGIPSHVTV----------------- 175 (217)
T ss_pred CCEEEEeCCcCC-CCCCCHHHHHHHHcCCCcCCCCCccHHHHHHH---HHHhccccCcccccc-----------------
Confidence 999999999995 45799999999999999999999999999999 222222222221111
Q ss_pred HHHHHHHHHHHHHhcCCCCCCHHHHHHHhcCCccCCCCcHHHHHHHHHhhhh
Q psy7003 179 FVILLIFVIVSFLEGKKYKVTKSEVEGALGGNICRCTGFRPILDAFQSFSCD 230 (1520)
Q Consensus 179 ~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~gn~crctgy~~i~~a~~~~~~~ 230 (1520)
-+..++ .||++||+++|+|||||||||++|++|+++++..
T Consensus 176 -----------~~~~~p-~pt~~eIrealsGNlCRCtgY~~Iv~Av~~~a~~ 215 (217)
T PRK11433 176 -----------DLTAAP-ELTADEIRERMSGNICRCGAYSNILEAIEDVAGE 215 (217)
T ss_pred -----------ccccCC-CCCHHHHHHHHcCCccCCCCcHHHHHHHHHHHhc
Confidence 122255 7999999999999999999999999999998743
No 23
>PRK09971 xanthine dehydrogenase subunit XdhB; Provisional
Probab=99.95 E-value=2.1e-27 Score=274.13 Aligned_cols=146 Identities=16% Similarity=0.152 Sum_probs=133.5
Q ss_pred EEEEcCCHHHHHHHHhcCCCCCCcEEEEecchhhhccCCC--CCCeeeeCCCcccccceEEe-CCeEEEccccCHHHHHH
Q psy7003 517 IWYIVTEVREIFEIFDGLEANQTYMLVGGNTGYGVYRPRV--PVDVYIQIRDIKELRQIFTR-NGYVLMGSATTLTEAMD 593 (1520)
Q Consensus 517 ~~~rPtSLeEal~ll~~~p~~~~a~lVAGGTdLgv~~k~~--~~~~lIdIs~I~EL~~I~~~-~~~L~IGA~vTlsel~e 593 (1520)
+||+|+|++|+++++++++ +++++|||||++++++.+ .++++||+++|+||+.|+.. +++|+|||++|++++++
T Consensus 6 ~~~~P~sl~Ea~~ll~~~~---~a~ivaGGTdl~~~~~~~~~~p~~lIdl~~i~eL~~I~~~~~~~l~IGA~vt~~~l~~ 82 (291)
T PRK09971 6 EYHEAATLEEAIELLADNP---QAKLIAGGTDVLIQLHHHNDRYRHLVSIHNIAELRGITLAEDGSIRIGAATTFTQIIE 82 (291)
T ss_pred ceeCCCCHHHHHHHHHhCC---CCEEEeccchHHHHHhCCCCCCCeEEEcCCChhhhCeEecCCCEEEEEeCCcHHHHhc
Confidence 7999999999999999887 899999999999987654 34899999999999999964 57899999999999987
Q ss_pred hhhhccCCchhhhhHHHHHHHHHhhcchhHhccc---ccCCCCCCCCCcc-----CCcEEEEEecCceee--ccccc---
Q psy7003 594 YFDRTSKTDANFEYMRIMKDHLEQVAHYAVRNFA---LGLSTTEVSPSLW-----SGARMIQIERAMSQG--SEDFE--- 660 (1520)
Q Consensus 594 ~L~~~~~~~~~~~~~~~La~al~~IAs~qIRN~A---GNL~~asp~SDL~-----lgA~V~I~s~~g~R~--l~dFf--- 660 (1520)
++.+.+.+|.|.++++.||++||||+| ||||+++|.||++ +||+|+|.+.+|.|. ++|||
T Consensus 83 -------~~~i~~~~p~L~~a~~~ia~~qIRN~aTiGGNi~~a~p~sD~~~~Llal~A~v~i~~~~g~R~vp~~df~~g~ 155 (291)
T PRK09971 83 -------DPIIQKHLPALAEAAVSIGGPQIRNVATIGGNICNGATSADSAPPLFALDAKLEIHSPNGVRFVPINGFYTGP 155 (291)
T ss_pred -------ChHHHHHhHHHHHHHHHhCCHHHhcceecccccccCCcchhHHHHHHHcCCEEEEEcCCCcEEEEHHHhcCCc
Confidence 556667899999999999999999999 9999999999999 999999999999887 89999
Q ss_pred ------cCce-eeeeeCCC
Q psy7003 661 ------TKQN-LWPLTKPL 672 (1520)
Q Consensus 661 ------~~EI-tsI~IP~~ 672 (1520)
++|| ++|.||.+
T Consensus 156 ~~t~l~~~Eil~~I~iP~~ 174 (291)
T PRK09971 156 GKVSLEHDEILVAFIIPPE 174 (291)
T ss_pred cccccCCCceEEEEEeCCC
Confidence 5899 99999953
No 24
>PF01315 Ald_Xan_dh_C: Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; InterPro: IPR000674 Aldehyde oxidase (1.2.3.1 from EC) catalyses the conversion of an aldehyde in the presence of oxygen and water to an acid and hydrogen peroxide. The enzyme is a homodimer, and requires FAD, molybdenum and two 2FE-2S clusters as cofactors. Xanthine dehydrogenase (1.1.1.204 from EC) catalyses the hydrogenation of xanthine to urate, and also requires FAD, molybdenum and two 2FE-2S clusters as cofactors. This activity is often found in a bifunctional enzyme with xanthine oxidase (1.1.3.22 from EC) activity too. The enzyme can be converted from the dehydrogenase form to the oxidase form irreversibly by proteolysis or reversibly through oxidation of sulphydryl groups.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1N63_E 1N60_B 1ZXI_E 1N5W_E 1N62_B 1N61_E 3AN1_B 2E3T_A 1WYG_A 2W3R_D ....
Probab=99.94 E-value=1.5e-27 Score=238.54 Aligned_cols=111 Identities=35% Similarity=0.536 Sum_probs=91.1
Q ss_pred ccccccccCCCCCCCcEEEEEEecCCCCeEeecCCchhhhcCCCEEEEEeccCCCCCCCCCCCCCCCcccccccCCCCcc
Q psy7003 756 AGEAEYVNDLPQLSEEYFASVVLADRGPAKIQSIDSTLALAYPGVHTFVHAKDIPGKNLAIPAAWPGQIFEDEKAYPGVH 835 (1520)
Q Consensus 756 tG~a~Y~~Di~~~pgmL~a~~vrSp~ahA~I~sID~s~A~a~PGV~avvt~~Dipg~n~~~~~~~~~~~~~~~~~~~~~~ 835 (1520)
||+++|++|+ .+|||||+++||||++||+|+|||+++|+++|||++|+|++|+|+.|.....
T Consensus 1 TG~a~Y~~Di-~~~~~l~~~~vrS~~a~a~I~sid~~~A~~~pGV~~v~t~~Dip~~~~~~~~----------------- 62 (111)
T PF01315_consen 1 TGEARYVDDI-PPPGMLYAAFVRSPIAHARIKSIDTSEALAMPGVVAVITAEDIPGINPNGGL----------------- 62 (111)
T ss_dssp TT-S-BGGGS-CSTTTEEEEEEE-SSSSEEEEEEEGHHHHHSTTEEEEEEGGGHSSGSEESCS-----------------
T ss_pred CcCeEccccc-CCCCCeEEEEEecCcCcEEEEEEecHHHccCCCEEEEEEecccCccccCccc-----------------
Confidence 8999999999 6999999999999999999999999999999999999999999987643210
Q ss_pred cccccccCCCCCCCCCCCCCCCCcccccccccCeeeecCCEEEEEEECCHHHHHHHcccceEEEeeCC
Q psy7003 836 TFVHAKDIPGKNLAIPAAWPGQIFEDEKLFAENEVEFAGQIIGAIIADNFKSAYEAAKMVKVVYSDVK 903 (1520)
Q Consensus 836 ~~~~~~~~~~~~~~~~~~~~g~~~~d~~~~a~~~V~y~GqpVaaVvAet~~~A~~Aa~lV~VeYe~l~ 903 (1520)
+......+++|++++|+|+|||||+|||+|+++|++|+++|+|+||+||
T Consensus 63 -------------------~~~~~~~~~~la~~~V~y~GqpVa~VvAet~~~A~~Aa~~V~V~Ye~lp 111 (111)
T PF01315_consen 63 -------------------PIPHDEPQPVLADDKVRYVGQPVALVVAETREAARDAAELVKVEYEELP 111 (111)
T ss_dssp -------------------CSTTSSEEESS-SSEESSTT-EEEEEEESSHHHHHHHHHT-EEEEEE--
T ss_pred -------------------cccCCCceEeccCCeEeECCCeEEEEEECCHHHHHHHhcCcEEEeEeCC
Confidence 0111123589999999999999999999999999999999999999985
No 25
>PF01799 Fer2_2: [2Fe-2S] binding domain; InterPro: IPR002888 The [2Fe-2S] binding domain is found in a range of enzymes including dehydrogenases, oxidases and oxidoreductases. The aldehyde oxido-reductase (Mop) from the sulphate reducing anaerobic Gram-negative bacterium Desulfovibrio gigas is a homodimer of 907 amino acid residues subunits and is a member of the xanthine oxidase family. The protein contains a molybdopterin cofactor (Mo-co) and two different [2Fe-2S] centres. It is folded into four domains of which the first two bind the iron sulphur centres and the last two are involved in Mo-co binding. Mo-co is a molybdenum molybdopterin cytosine dinucleotide. Molybdopterin forms a tricyclic system with the pterin bicycle annealed to a pyran ring. The molybdopterin dinucleotide is deeply buried in the protein. The cis-dithiolene group of the pyran ring binds the molybdenum, which is coordinated by three more (oxygen) ligands [].; GO: 0016491 oxidoreductase activity, 0046872 metal ion binding, 0055114 oxidation-reduction process; PDB: 2E3T_A 1WYG_A 3AN1_B 2E1Q_C 2CKJ_A 3B9J_I 3NVY_J 1FO4_B 3NRZ_J 3AM9_A ....
Probab=99.94 E-value=9.8e-28 Score=222.67 Aligned_cols=75 Identities=45% Similarity=0.929 Sum_probs=63.0
Q ss_pred EecCCCCCCCCCCHHHHHHHHhCCCCCCCCchhHHHHHhhhhccccccccCCcchhhHHhhhhhccCCCcchhHHHHHHH
Q psy7003 104 TVEGLGSKKKGYHNVQTRLATMNGSQCGYCSPGMVMAMYSRHRLTASTMCGHNFTKTLLLQMYCIFLPPFSLEVLFVILL 183 (1520)
Q Consensus 104 T~eg~~~~~~~~h~vq~~~~~~~~~qcg~ctpg~vm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (1520)
|||||++ .+.|||||++|++++++|||||||||||++++
T Consensus 1 TvEGl~~-~~~~~~iq~af~~~~a~QCGfCtpG~im~~~~---------------------------------------- 39 (75)
T PF01799_consen 1 TVEGLAS-DGELHPIQQAFVEHGAVQCGFCTPGMIMAAYA---------------------------------------- 39 (75)
T ss_dssp -GGGSSB-TTB--HHHHHHHHTT--SSSSSHHHHHHHHHH----------------------------------------
T ss_pred CcCcCCC-CCCcCHHHHHHHHhCCCcCCcchHHHHHHHHH----------------------------------------
Confidence 8999975 56899999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCHHHHHHHhcCCccCCCCcHHHHHHHHH
Q psy7003 184 IFVIVSFLEGKKYKVTKSEVEGALGGNICRCTGFRPILDAFQS 226 (1520)
Q Consensus 184 ~~~~~~~l~~~~~~~~~~~i~~~~~gn~crctgy~~i~~a~~~ 226 (1520)
||++++ .||++||+++|+||+||||||++|++|+++
T Consensus 40 ------ll~~~~-~p~~~ei~~al~gnlCRCTgY~~I~~Av~~ 75 (75)
T PF01799_consen 40 ------LLRRNP-DPTEEEIREALSGNLCRCTGYRPIVEAVRQ 75 (75)
T ss_dssp ------HHHHSS-S-CHHHHHHHTTTS--SSSTSHHHHHHHH-
T ss_pred ------Hhhccc-chhhHHHHHHHHcCccCCCCcHHHHHHHhC
Confidence 888888 899999999999999999999999999974
No 26
>TIGR03195 4hydrxCoA_B 4-hydroxybenzoyl-CoA reductase, beta subunit. This model represents the second largest chain, beta, of the enzyme 4-hydroxybenzoyl-CoA reductase. In species capable of degrading various aromatic compounds by way of benzoyl-CoA, this enzyme can convert 4-hydroxybenzoyl-CoA to benzoyl-CoA.
Probab=99.93 E-value=4.5e-26 Score=264.72 Aligned_cols=148 Identities=13% Similarity=0.014 Sum_probs=134.2
Q ss_pred ccEEEEcCCHHHHHHHHhcCCCCCCcEEEEecchhhhccCCC--CCCeeeeCCCcccccceEEeCCeEEEccccCHHHHH
Q psy7003 515 EGIWYIVTEVREIFEIFDGLEANQTYMLVGGNTGYGVYRPRV--PVDVYIQIRDIKELRQIFTRNGYVLMGSATTLTEAM 592 (1520)
Q Consensus 515 ~~~~~rPtSLeEal~ll~~~p~~~~a~lVAGGTdLgv~~k~~--~~~~lIdIs~I~EL~~I~~~~~~L~IGA~vTlsel~ 592 (1520)
.-.||+|+|++||++++++++ +++++||||||+++++.+ .++++|||++|+||+.|+.++++|+|||+||+++++
T Consensus 4 ~f~~~~P~sl~eA~~ll~~~~---~a~ivaGGTdl~~~~~~~~~~p~~lIdi~~I~eL~~I~~~~~~l~IGA~vT~~~l~ 80 (321)
T TIGR03195 4 DFRTLRPASLADAVAALAAHP---AARPLAGGTDLLPNLRRGLGQPETLVDLTGIDEIAQLSTLADGLRIGAGVTLAALA 80 (321)
T ss_pred CceEECCCCHHHHHHHHhhCC---CCEEEEccchHHHHHhcccCCCCeEEECCCChhhccEEecCCEEEEeccCcHHHHh
Confidence 346999999999999999987 799999999999987654 348999999999999999999999999999999998
Q ss_pred HhhhhccCCchhhhhHHHHHHHHHhhcchhHhccc---ccCC--------------------------------------
Q psy7003 593 DYFDRTSKTDANFEYMRIMKDHLEQVAHYAVRNFA---LGLS-------------------------------------- 631 (1520)
Q Consensus 593 e~L~~~~~~~~~~~~~~~La~al~~IAs~qIRN~A---GNL~-------------------------------------- 631 (1520)
+ ++.+...+|.|.++++.||++||||+| ||||
T Consensus 81 ~-------~~~i~~~~p~L~~a~~~ias~qIRN~aTiGGNi~~~~~c~~~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~c 153 (321)
T TIGR03195 81 E-------DALVRTRWPALAQAARAVAGPTHRAAATLGGNLCLDTRCIYYNQSEWWRSGNGYCLKYRGDKCHVAPKSDRC 153 (321)
T ss_pred h-------ChhhHhHhHHHHHHHHHhCCHHHhCceecHHhhhccCCCcccccccccccccccccccCCccccccCCCccc
Confidence 8 666677899999999999999999999 9999
Q ss_pred CCCCCCCcc-----CCcEEEEEecCceee--ccccc-----------cCce-eeeeeCCC
Q psy7003 632 TTEVSPSLW-----SGARMIQIERAMSQG--SEDFE-----------TKQN-LWPLTKPL 672 (1520)
Q Consensus 632 ~asp~SDL~-----lgA~V~I~s~~g~R~--l~dFf-----------~~EI-tsI~IP~~ 672 (1520)
+++|+||++ +||+|+|.+..|.|+ ++||| ++|| ++|.||..
T Consensus 154 ~a~p~sD~~~~LlAldA~v~i~~~~g~R~vpl~dF~~~~g~~~t~L~~~Eiit~I~iP~~ 213 (321)
T TIGR03195 154 YAAFSGDVAPALLVLDAEAEIVGPAGVRRVPLAELYVEDGAAHLTLEPGEVLAAVRVPPT 213 (321)
T ss_pred cCCCchHHHHHHHHcCCEEEEEeCCccEEEEHHHHhcccCCccccCCCCCeEEEEEecCC
Confidence 567899998 999999999999888 89998 4789 99999954
No 27
>COG4630 XdhA Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A [Nucleotide transport and metabolism]
Probab=99.93 E-value=7.1e-27 Score=264.17 Aligned_cols=98 Identities=43% Similarity=0.858 Sum_probs=91.9
Q ss_pred CcceEEEECCEEEEecccCCCCcchhHHHHhhhcccCccccccCCCccceeeeeccC-----------------------
Q psy7003 295 SSTVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTSS----------------------- 351 (1520)
Q Consensus 295 ~~~~~f~~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~~g~cGactV~v~~~----------------------- 351 (1520)
.++|||++||+.+.+ ..++|++|||||||.+++++||||||++||||||||+|++.
T Consensus 6 ~~~irf~lN~~~~~l-~~v~P~~TlLd~LR~d~~ltGtKEGCAEGDCGACTVlVgrl~~g~~l~yeSVNACirfl~sL~G 84 (493)
T COG4630 6 RNTIRFLLNGETRVL-SDVPPTTTLLDYLRLDRRLTGTKEGCAEGDCGACTVLVGRLVDGGSLRYESVNACIRFLGSLDG 84 (493)
T ss_pred cceeEEEecCceEEe-ecCCcchHHHHHHHHhcccccccccccCCCcCceEEEEEeecCCCceeeeehhHHHHHHhhcCC
Confidence 589999999999988 78999999999999999999999999999999999999753
Q ss_pred ----------------CCccccccccccccccccc--------------------------ccCccccccCCccchhhhh
Q psy7003 352 ----------------HPVTGVDSTYSVNACGDRC--------------------------FTRNICRCTGFRPILDAFQ 389 (1520)
Q Consensus 352 ----------------hpvq~~~~~~~~~~Cg~~C--------------------------~~gNLCRCTgyrpIlda~~ 389 (1520)
|||||+|+++||+||| || +.|||||||||+||+||++
T Consensus 85 ~hvvTvE~L~~~~g~LHpVQqamvd~hGSQCG-fCTPGFVmSLyal~~~~~~P~~a~i~kALqGNLCRCTGY~pI~~AA~ 163 (493)
T COG4630 85 THVVTVEHLRGQDGTLHPVQQAMVDFHGSQCG-FCTPGFVMSLYALWMNSPTPSRAAIEKALQGNLCRCTGYRPIIRAAE 163 (493)
T ss_pred ceEEEehhhcCCCCCcCHHHHHHHhccCCccC-CcCchHHHHHHHHHhcCCCCchhHHHHHhhCCcccccCchHHHHHHH
Confidence 9999999999999999 88 4999999999999999999
Q ss_pred cccCC
Q psy7003 390 SFSCD 394 (1520)
Q Consensus 390 ~~~~~ 394 (1520)
+.++.
T Consensus 164 ~~~a~ 168 (493)
T COG4630 164 AIAAL 168 (493)
T ss_pred HHhcc
Confidence 87654
No 28
>PF00941 FAD_binding_5: FAD binding domain in molybdopterin dehydrogenase; InterPro: IPR002346 Oxidoreductases, that also bind molybdopterin, have essentially no similarity outside this common domain. They include aldehyde oxidase (1.2.3.1 from EC), that converts an aldehyde and water to an acid and hydrogen peroxide, and xanthine dehydrogenase (1.1.1.204 from EC), that converts xanthine to urate. These enzymes require molybdopterin and FAD as cofactors and have and two 2FE-2S clusters. Another enzyme that contains this domain is the Pseudomonas thermocarboxydovorans carbon monoxide oxygenase.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2E1Q_C 2CKJ_A 3EUB_K 3NS1_K 3NVV_B 1FO4_B 3AM9_A 3AX7_B 3BDJ_A 3ETR_B ....
Probab=99.93 E-value=3.6e-26 Score=244.98 Aligned_cols=148 Identities=22% Similarity=0.200 Sum_probs=128.3
Q ss_pred ccEEEEcCCHHHHHHHHhcCCCCCCcEEEEecchhhhccCCC--CCCeeeeCCCcccccceEEeCCeEEEccccCHHHHH
Q psy7003 515 EGIWYIVTEVREIFEIFDGLEANQTYMLVGGNTGYGVYRPRV--PVDVYIQIRDIKELRQIFTRNGYVLMGSATTLTEAM 592 (1520)
Q Consensus 515 ~~~~~rPtSLeEal~ll~~~p~~~~a~lVAGGTdLgv~~k~~--~~~~lIdIs~I~EL~~I~~~~~~L~IGA~vTlsel~ 592 (1520)
..+||+|+|++||+++++.++ +++++||||+++++++.+ .++.+||+++|+||+.|+.++++|+|||++|+++++
T Consensus 2 ~~~~~~P~sl~ea~~ll~~~~---~a~~vaGgT~l~~~~~~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vtl~~l~ 78 (171)
T PF00941_consen 2 PFEYFRPKSLEEALELLAKGP---DARIVAGGTDLGVQMREGILSPDVLIDLSRIPELNGISEDDGGLRIGAAVTLSELE 78 (171)
T ss_dssp S-EEEE-SSHHHHHHHHHHGT---TEEEESS-TTHHHHHHTTS---SEEEEGTTSGGGG-EEEETSEEEEETTSBHHHHH
T ss_pred CeEEEccCCHHHHHHHHhcCC---CCEEEeCCCccchhcccCccccceEEEeEEecccccEEEeccEEEECCCccHHHHh
Confidence 357999999999999999777 899999999999998766 358999999999999999999999999999999999
Q ss_pred HhhhhccCCchhhhhHHHHHHHHHhhcchhHhccc---ccCCCCCCCCCcc-----CCcEEEEEecCceee--ccccc--
Q psy7003 593 DYFDRTSKTDANFEYMRIMKDHLEQVAHYAVRNFA---LGLSTTEVSPSLW-----SGARMIQIERAMSQG--SEDFE-- 660 (1520)
Q Consensus 593 e~L~~~~~~~~~~~~~~~La~al~~IAs~qIRN~A---GNL~~asp~SDL~-----lgA~V~I~s~~g~R~--l~dFf-- 660 (1520)
+ ++...++++.|+++++.+|++||||+| ||||+++|+||++ +||+|++.+.+|.|. ++|||
T Consensus 79 ~-------~~~~~~~~p~L~~~~~~ias~~IRn~aTiGGNl~~~~~~sD~~~~Llal~A~v~i~~~~g~r~~~~~~f~~g 151 (171)
T PF00941_consen 79 E-------SPLIQQYFPALAQAARRIASPQIRNRATIGGNLCNASPASDLAPALLALDARVEIASPDGTRTVPLEDFFTG 151 (171)
T ss_dssp H-------HHHHHHHHHHHHHHHCTSS-HHHHTT-BHHHHHHHTBTT-SHHHHHHHTT-EEEEEETTEEEEEEGGGGEEC
T ss_pred h-------cchhhhhHHHHHHHHHHhCCHhHeeeeeeccccccCcccccHHHHHHHhCcEEEEEcCCeeEEEEHHHhcCc
Confidence 8 345678999999999999999999999 9999999999999 999999999999888 89999
Q ss_pred -------cCce-eeeeeCCC
Q psy7003 661 -------TKQN-LWPLTKPL 672 (1520)
Q Consensus 661 -------~~EI-tsI~IP~~ 672 (1520)
++|| ++|+||.|
T Consensus 152 ~~~~~l~~~eli~~I~iP~~ 171 (171)
T PF00941_consen 152 PRKTDLEPGELITSIRIPKP 171 (171)
T ss_dssp TTEESS-TTEEEEEEEEES-
T ss_pred cccccCCCCcEEEEEECCCC
Confidence 6899 99999975
No 29
>TIGR03199 pucC xanthine dehydrogenase C subunit. This gene has been characterized in B. subtilis as the FAD binding-subunit of xanthine dehydrogenase (pucC), acting in conjunction with pucD, the molybdopterin-binding subunit and pucE, the FeS-binding subunit.
Probab=99.92 E-value=3.8e-25 Score=252.25 Aligned_cols=139 Identities=17% Similarity=0.141 Sum_probs=126.4
Q ss_pred cCCHHHHHHHHhcCCCCCCcEEEEecchhhhccCCC---CCCeeeeCCCcccccceEEeCCeEEEccccCHHHHHHhhhh
Q psy7003 521 VTEVREIFEIFDGLEANQTYMLVGGNTGYGVYRPRV---PVDVYIQIRDIKELRQIFTRNGYVLMGSATTLTEAMDYFDR 597 (1520)
Q Consensus 521 PtSLeEal~ll~~~p~~~~a~lVAGGTdLgv~~k~~---~~~~lIdIs~I~EL~~I~~~~~~L~IGA~vTlsel~e~L~~ 597 (1520)
|+||+|++++|++++ +++++|||||+++.++.+ .++.+||+++|+||+.|+.++++|+|||++|++++++
T Consensus 1 P~sl~ea~~ll~~~~---~a~ivaGgT~l~~~~~~~~~~~~~~lIdi~~i~eL~~I~~~~~~l~IGA~vt~~~l~~---- 73 (264)
T TIGR03199 1 PAALDEAWSLLEKAP---DSTFVSGSTLLQLQWEKGTLPMKQHLVSLEGIDELKGISTSDTHVSIGALTTLNECRK---- 73 (264)
T ss_pred CCCHHHHHHHHHhCC---CCEEEEccChHHHHHhcCcCCCCCeEEEcCCChhhCcEEecCCEEEEecCCcHHHHhh----
Confidence 789999999999987 899999999999986554 2589999999999999999999999999999999986
Q ss_pred ccCCchhhhhHHHHHHHHHhhcchhHhccc---ccCCCCCCCCCcc-----CCcEEEEEecCceee--ccccc------c
Q psy7003 598 TSKTDANFEYMRIMKDHLEQVAHYAVRNFA---LGLSTTEVSPSLW-----SGARMIQIERAMSQG--SEDFE------T 661 (1520)
Q Consensus 598 ~~~~~~~~~~~~~La~al~~IAs~qIRN~A---GNL~~asp~SDL~-----lgA~V~I~s~~g~R~--l~dFf------~ 661 (1520)
++...+++|.|.++++.||++||||+| ||||++ .||++ +||+|++.+ .|.|. +++|| +
T Consensus 74 ---~~~i~~~~p~L~~a~~~ia~~qIRN~aTlGGNl~~~--~sD~~p~Llal~A~v~i~~-~g~r~vp~~~f~~~~~l~~ 147 (264)
T TIGR03199 74 ---NPLIKRALPCFVDAASAIAAPGVRNRATIGGNIASG--IGDFIPALLVLGAELIVYQ-KELIRLPLGAWLSEEDFKP 147 (264)
T ss_pred ---ChHhHhHhHHHHHHHHHhcCHHHhcceecHHhccCc--ccchHHHHHHcCCEEEEEe-CCEEEEEHHHhhhccCCCC
Confidence 555667899999999999999999999 999998 78998 999999999 88777 89998 5
Q ss_pred Cce-eeeee-CCC
Q psy7003 662 KQN-LWPLT-KPL 672 (1520)
Q Consensus 662 ~EI-tsI~I-P~~ 672 (1520)
+|| ++|.| |..
T Consensus 148 ~Eii~~I~i~p~~ 160 (264)
T TIGR03199 148 TAIVTRVIIGPRA 160 (264)
T ss_pred CcEEEEEEEECCC
Confidence 899 99999 654
No 30
>PRK09799 putative oxidoreductase; Provisional
Probab=99.92 E-value=5.5e-25 Score=249.96 Aligned_cols=167 Identities=16% Similarity=0.145 Sum_probs=143.9
Q ss_pred EEEEcCCHHHHHHHHhcCCCCCCcEEEEecchhhhccCCCCCCeeeeCCCcccccceEEeCCeEEEccccCHHHHHHhhh
Q psy7003 517 IWYIVTEVREIFEIFDGLEANQTYMLVGGNTGYGVYRPRVPVDVYIQIRDIKELRQIFTRNGYVLMGSATTLTEAMDYFD 596 (1520)
Q Consensus 517 ~~~rPtSLeEal~ll~~~p~~~~a~lVAGGTdLgv~~k~~~~~~lIdIs~I~EL~~I~~~~~~L~IGA~vTlsel~e~L~ 596 (1520)
+||+|+|++|+++++++++ ++++++||||||++..+...++.+|||++| ||+.|+.++++|+|||++|++++.+.
T Consensus 4 ~y~~P~sl~Ea~~ll~~~~--~~a~ilAGGT~L~~~~~~~~~~~lIdi~~i-eL~~I~~~~~~l~IGA~vT~~~l~~~-- 78 (258)
T PRK09799 4 QFFRPDSVEQALELKRRYQ--DEAVWFAGGSKLNATPTRTDKKIAISLQDL-ELDWIEWDNGALRIGAMSRLQPLRDA-- 78 (258)
T ss_pred cEeCCCCHHHHHHHHHhCC--CCCEEEecCCChHhhhCCCCCCEEEEcCCC-CCCeEEecCCEEEEccCCcHHHHHhC--
Confidence 6999999999999999885 369999999999887655556889999999 99999999999999999999999872
Q ss_pred hccCCchhhhhHHHHHHHHHhhcchhHhccc---ccCCCCCCCCCcc-----CCcEEEEEecCceee--ccccc---cCc
Q psy7003 597 RTSKTDANFEYMRIMKDHLEQVAHYAVRNFA---LGLSTTEVSPSLW-----SGARMIQIERAMSQG--SEDFE---TKQ 663 (1520)
Q Consensus 597 ~~~~~~~~~~~~~~La~al~~IAs~qIRN~A---GNL~~asp~SDL~-----lgA~V~I~s~~g~R~--l~dFf---~~E 663 (1520)
... .+.|.++++.||++||||+| ||||+++|.||++ +||+|++.+. |. ++||| ++|
T Consensus 79 -----~~~---~~~L~~a~~~vas~qIRN~aTiGGNl~~a~p~sD~~p~LlAldA~v~l~~~---r~vpl~~f~~g~~~E 147 (258)
T PRK09799 79 -----RFI---PAALREALGFVYSRHLRNQSTIGGEIAARQEESVLLPVLLALDAELVFGNG---ETLSIEDYLACPCDR 147 (258)
T ss_pred -----ccc---HHHHHHHHHHhCCHHHhccchhHHHhhcCCccHHHHHHHHHcCCEEEEecC---cEEeHHHhcCCCCCc
Confidence 111 13899999999999999999 9999999999998 9999999884 45 89999 789
Q ss_pred e-eeeeeCCCCcc-------------------------cccccccc----------------------------cccccC
Q psy7003 664 N-LWPLTKPLPKI-------------------------DAITQCAG----------------------------EAEYVN 689 (1520)
Q Consensus 664 I-tsI~IP~~~~~-------------------------~~arIa~G----------------------------El~p~~ 689 (1520)
| ++|.||.+... ..+||+|| ++.|..
T Consensus 148 il~~I~iP~~~~~~~~~K~~r~~~~~a~v~~A~~~~~~~~~ria~Ggv~~~p~r~~~~E~~~~~~~~~~~a~~~~~~p~~ 227 (258)
T PRK09799 148 LLTEIIIPDPYRTCATRKISRSQAGLTVVTAAVALTDHDGMRIALDGVASKPLRLHDVEKQNLEGNALEQAVANAIFPQE 227 (258)
T ss_pred EEEEEEcCCCCCcceEEEecccccChhhheeEEEEEEcCCeEEEEECCCCcccchHHHhcCCCCHHHHHHHHHhcCCCCc
Confidence 9 99999964221 55789999 256666
Q ss_pred CCCCCcHHHHH
Q psy7003 690 DLPQLSEEYFA 700 (1520)
Q Consensus 690 d~P~gS~EYRr 700 (1520)
|. ++|++||+
T Consensus 228 d~-~~s~~YR~ 237 (258)
T PRK09799 228 DL-RGSVAYKR 237 (258)
T ss_pred cC-CcCHHHHH
Confidence 66 99999999
No 31
>COG1319 CoxM Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs [Energy production and conversion]
Probab=99.92 E-value=5.4e-25 Score=250.50 Aligned_cols=147 Identities=20% Similarity=0.146 Sum_probs=134.5
Q ss_pred cEEEEcCCHHHHHHHHhcCCCCCCcEEEEecchhhhccCCC--CCCeeeeCCCcccccceEEeCCe-EEEccccCHHHHH
Q psy7003 516 GIWYIVTEVREIFEIFDGLEANQTYMLVGGNTGYGVYRPRV--PVDVYIQIRDIKELRQIFTRNGY-VLMGSATTLTEAM 592 (1520)
Q Consensus 516 ~~~~rPtSLeEal~ll~~~p~~~~a~lVAGGTdLgv~~k~~--~~~~lIdIs~I~EL~~I~~~~~~-L~IGA~vTlsel~ 592 (1520)
.+||+|+|++||+.++++.+ +++++||||+|...++.+ .+..+|||++++++..+...+++ ++|||+||++++.
T Consensus 4 f~y~rp~Sv~eA~~ll~~~~---~a~~laGGt~L~~~~k~~~~~p~~lVdI~~l~~~~~~~~~~g~~l~IGA~vt~~ei~ 80 (284)
T COG1319 4 FEYYRPASVEEALNLLARAP---DAKYLAGGTDLLPLMKLGIERPDHLVDINGLDELLGIVTTEGGSLRIGALVTLTEIA 80 (284)
T ss_pred eEEECCCCHHHHHHHHHhCC---CcEEeeCcchHHHHhhcccCCcceEEEecCChhhhceEeecCCEEEEeecccHHHHH
Confidence 47999999999999999887 899999999999988765 34899999999988888776555 9999999999999
Q ss_pred HhhhhccCCchhhhhHHHHHHHHHhhcchhHhccc---ccCCCCCCCCCcc-----CCcEEEEEecCceee--ccccc--
Q psy7003 593 DYFDRTSKTDANFEYMRIMKDHLEQVAHYAVRNFA---LGLSTTEVSPSLW-----SGARMIQIERAMSQG--SEDFE-- 660 (1520)
Q Consensus 593 e~L~~~~~~~~~~~~~~~La~al~~IAs~qIRN~A---GNL~~asp~SDL~-----lgA~V~I~s~~g~R~--l~dFf-- 660 (1520)
. ++.+...+|.|.+++..+|++||||+| ||+|+++|++|+. |||+|++.+..|+|+ +++||
T Consensus 81 ~-------~~~~~~~~p~L~ea~~~ia~~qvRN~aTiGGn~c~a~p~aD~~~aLlaLdA~v~~~~~~g~r~i~~~~f~~~ 153 (284)
T COG1319 81 R-------HPAVRRIPPALSEAASAIASPQVRNRATIGGNLCNADPAADLAPALLALDAEVEIRSPGGERTIPIEDFFRG 153 (284)
T ss_pred h-------ChhhhhhchHHHHHHHHhcChhhcceeeecchhccCCCchhhHHHHHHcCCEEEEecCCccEEEEHHHhhcC
Confidence 8 666778999999999999999999999 9999999999999 999999999999888 89999
Q ss_pred -------cCce-eeeeeCCC
Q psy7003 661 -------TKQN-LWPLTKPL 672 (1520)
Q Consensus 661 -------~~EI-tsI~IP~~ 672 (1520)
++|| |+|.+|++
T Consensus 154 p~~t~l~~gelit~v~lP~~ 173 (284)
T COG1319 154 PGETALEPGELITAVILPPP 173 (284)
T ss_pred ccccccCCCcEEEEEEcCCC
Confidence 6889 99999996
No 32
>TIGR03312 Se_sel_red_FAD probable selenate reductase, FAD-binding subunit. This protein is suggested by Bebien, et al., to be the FAD-binding subunit of a molydbopterin-containing selenate reductase. Our comparative genomics suggests it to be a subunit of a selenium-dependent molybdenum hydroxylase for an unknown substrate.
Probab=99.92 E-value=8.5e-25 Score=248.22 Aligned_cols=168 Identities=15% Similarity=0.148 Sum_probs=143.2
Q ss_pred EEEEcCCHHHHHHHHhcCCCCCCcEEEEecchhhhccCCCCCCeeeeCCCcccccceEEeCCeEEEccccCHHHHHHhhh
Q psy7003 517 IWYIVTEVREIFEIFDGLEANQTYMLVGGNTGYGVYRPRVPVDVYIQIRDIKELRQIFTRNGYVLMGSATTLTEAMDYFD 596 (1520)
Q Consensus 517 ~~~rPtSLeEal~ll~~~p~~~~a~lVAGGTdLgv~~k~~~~~~lIdIs~I~EL~~I~~~~~~L~IGA~vTlsel~e~L~ 596 (1520)
+||+|+|++|++++|++++ ++++++||||||++.++...++.+||+++| ||+.|+.++++|+|||++|++++.+
T Consensus 3 ~y~~P~sl~Ea~~ll~~~~--~~a~~lAGGTdL~~~~~~~~~~~lIdl~~i-eL~~I~~~~~~l~IGA~~t~~~l~~--- 76 (257)
T TIGR03312 3 QFFRPESTIQALELKKRHT--GVAVWFAGGSKLNATPTRTDKKVAISLDKL-ALDKIELQGGALHIGAMCHLQSLID--- 76 (257)
T ss_pred ceECCCCHHHHHHHHHhCC--CCCEEEecCcchhhhhcccCCCEEEEcCCC-CCCcEEecCCEEEEEeCCcHHHHHh---
Confidence 5999999999999999885 369999999999877654445789999999 9999999999999999999999987
Q ss_pred hccCCchhhhhHHHHHHHHHhhcchhHhccc---ccCCCCCCCCCcc-----CCcEEEEEecCceee--ccccc---cCc
Q psy7003 597 RTSKTDANFEYMRIMKDHLEQVAHYAVRNFA---LGLSTTEVSPSLW-----SGARMIQIERAMSQG--SEDFE---TKQ 663 (1520)
Q Consensus 597 ~~~~~~~~~~~~~~La~al~~IAs~qIRN~A---GNL~~asp~SDL~-----lgA~V~I~s~~g~R~--l~dFf---~~E 663 (1520)
++... +.|.++++.+|++||||+| ||||+++|.+|+. +||+|++.+. |. ++||| ++|
T Consensus 77 ----~~~~~---~~L~~aa~~va~~qIRN~gTlGGNl~~a~p~~D~~~~LlaldA~v~l~~~---r~vp~~dF~~g~~~E 146 (257)
T TIGR03312 77 ----NELTP---AALKEALGFVYSRHIRNQATIGGEIAAFQSESLLLPVLLALKATVVLANA---SQMDIEDYLASEQRE 146 (257)
T ss_pred ----CcchH---HHHHHHHHHhCCHHHhccccHHHHhhcCCCchHHHHHHHHcCCEEEEecC---cEEeHHHhcCCCCCc
Confidence 33221 2799999999999999999 9999999999998 9999999886 44 89999 789
Q ss_pred e-eeeeeCCCCcc-------------------------cccccccc----------------------------cccccC
Q psy7003 664 N-LWPLTKPLPKI-------------------------DAITQCAG----------------------------EAEYVN 689 (1520)
Q Consensus 664 I-tsI~IP~~~~~-------------------------~~arIa~G----------------------------El~p~~ 689 (1520)
| ++|+||.+... ..+||++| ++.|.+
T Consensus 147 ll~~V~iP~~~~~~~~~k~~R~~~~~a~v~~A~~~~~~~~~ria~ggv~~~p~r~~~~E~~~~~~~~~~~~~~~~~~p~~ 226 (257)
T TIGR03312 147 LIVEVIIPNPNLMCATRNISRSAAGLAVVTAAVAVDQKGNMRIALDGVSPVPVRLRDVEAQDLKGEALEQAVADAIHPVA 226 (257)
T ss_pred EEEEEEcCCCCCCceEEEecCcccchhhheeEEEEEecCCEEEEEEccCCceeehHHHhhCcCCHHHHHHHHHhcCCCCC
Confidence 9 99999964221 35789997 245666
Q ss_pred CCCCCcHHHHHH
Q psy7003 690 DLPQLSEEYFAS 701 (1520)
Q Consensus 690 d~P~gS~EYRrK 701 (1520)
|. ++|++|||.
T Consensus 227 D~-r~sa~YRr~ 237 (257)
T TIGR03312 227 DL-CGSVAYKRY 237 (257)
T ss_pred CC-cCCHHHHHH
Confidence 65 999999993
No 33
>KOG0430|consensus
Probab=99.81 E-value=1.5e-20 Score=236.24 Aligned_cols=97 Identities=44% Similarity=0.879 Sum_probs=88.3
Q ss_pred ceEEEECCEEEEecccCCCCcchhHHHHhhhcccCccccccCCCccceeeeeccC-------------------------
Q psy7003 297 TVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTSS------------------------- 351 (1520)
Q Consensus 297 ~~~f~~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~~g~cGactV~v~~~------------------------- 351 (1520)
.+.|.+||+.+++. .+||++||+.|||++++|+|||.+|++|+||||||+++..
T Consensus 2 ~l~F~VNG~~~~~~-~vdP~~TL~~fLR~k~~ltgtKlgC~EGGCGaCtv~ls~~dp~~~~~~~avNsCLt~l~s~~g~~ 80 (1257)
T KOG0430|consen 2 ELVFAINGKRVEVE-LLPPDLTLNTFLREKLGLTGTKLGCGEGGCGACTVVLSKYDPELKVRHWAVNSCLTLLNSVHGLE 80 (1257)
T ss_pred ceEEEECCEEeeEe-cCCcchhHHHHHHHhcCCcceeeccCCCCccceEEEEeccCCCceeEEeehhhhhhhcccccceE
Confidence 47899999999995 5999999999999999999999999999999999999863
Q ss_pred --------------CCccccccccccccccccc---------------------------ccCccccccCCccchhhhhc
Q psy7003 352 --------------HPVTGVDSTYSVNACGDRC---------------------------FTRNICRCTGFRPILDAFQS 390 (1520)
Q Consensus 352 --------------hpvq~~~~~~~~~~Cg~~C---------------------------~~gNLCRCTgyrpIlda~~~ 390 (1520)
||+|.-+.-.|++||| +| +.||||||||||||+||+++
T Consensus 81 VtT~EGlGn~~~g~HPiq~RlA~~hgsQCG-FCtPG~vmsmYalL~n~~~~~T~~eie~a~~GNLCRCTGYRPIldA~kS 159 (1257)
T KOG0430|consen 81 VTTSEGLGNRRDGYHPIQERLAKMHGSQCG-FCTPGFVMSMYALLRNSKNSPTMEEIENAFGGNLCRCTGYRPILDAMKS 159 (1257)
T ss_pred EEeeecccccccCcCcHHHHHhhccCCccc-CCCccHHHHHHHHHHhCCCCCCHHHHHHhhccceeeecCCchHHHHHhh
Confidence 7777777778999999 77 48999999999999999999
Q ss_pred ccCCC
Q psy7003 391 FSCDA 395 (1520)
Q Consensus 391 ~~~~~ 395 (1520)
|+.+.
T Consensus 160 Fa~d~ 164 (1257)
T KOG0430|consen 160 FAVDS 164 (1257)
T ss_pred hccCC
Confidence 98664
No 34
>TIGR03193 4hydroxCoAred 4-hydroxybenzoyl-CoA reductase, gamma subunit. 4-hydroxybenzoyl-CoA reductase converts 4-hydroxybenzoyl-CoA to benzoyl-CoA, a common intermediate in the degradation of aromatic compounds. This protein family represents the gamma chain of this three-subunit enzyme.
Probab=99.80 E-value=2.4e-20 Score=193.54 Aligned_cols=90 Identities=36% Similarity=0.658 Sum_probs=82.5
Q ss_pred eEEEECCEEEEecccCCCCcchhHHHHhhhcccCccccccCCCccceeeeecc---------------------------
Q psy7003 298 VRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTS--------------------------- 350 (1520)
Q Consensus 298 ~~f~~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~~g~cGactV~v~~--------------------------- 350 (1520)
++|++||+.+++ +++|+++|+++||++++++|+|.+|..|+||||||+|..
T Consensus 2 i~~~vNG~~~~~--~~~~~~~Ll~~LR~~lgltg~K~gC~~G~CGACtVlvdg~~v~SCl~~~~~~~G~~V~TiEgl~~~ 79 (148)
T TIGR03193 2 LRLTVNGRWRED--AVADNMLLVDYLRDTVGLTGTKQGCDGGECGACTVLVDGRPRLACSTLAHRVAGRKVETVEGLATN 79 (148)
T ss_pred EEEEECCEEEEe--ecCCCCcHHHHHHHhcCCCCCCCCCCCCCCCCCEEEECCeEeeccHhhHhhcCCCcEEEeCCCCCC
Confidence 689999999876 688999999999999999999999999999999999842
Q ss_pred --CCCccccccccccccccccc--------------------------ccCccccccCCccchhhhhc
Q psy7003 351 --SHPVTGVDSTYSVNACGDRC--------------------------FTRNICRCTGFRPILDAFQS 390 (1520)
Q Consensus 351 --~hpvq~~~~~~~~~~Cg~~C--------------------------~~gNLCRCTgyrpIlda~~~ 390 (1520)
.||+|+++++.++.||| +| +.|||||||||++|++|.+.
T Consensus 80 ~~l~pvq~af~~~~a~QCG-fCtPG~vms~~~ll~~~p~ps~~ei~~al~GnLCRCTGY~~I~~Av~~ 146 (148)
T TIGR03193 80 GRLSRLQQAFHERLGTQCG-FCTPGMIMAAEALLRRNPSPSRDEIRAALAGNLCRCTGYVKIIESVEA 146 (148)
T ss_pred CCCCHHHHHHHHcCCCcCC-CCCccHHHHHHHHHHcCCCCCHHHHHHHHcCCccCCCCCHHHHHHHHH
Confidence 29999999999999999 88 48999999999999998865
No 35
>PRK09908 xanthine dehydrogenase subunit XdhC; Provisional
Probab=99.80 E-value=3.9e-20 Score=193.83 Aligned_cols=93 Identities=33% Similarity=0.673 Sum_probs=83.7
Q ss_pred CCcceEEEECCEEEEecccCCCCcchhHHHHhhhcccCccccccCCCccceeeeecc-----------------------
Q psy7003 294 TSSTVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTS----------------------- 350 (1520)
Q Consensus 294 ~~~~~~f~~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~~g~cGactV~v~~----------------------- 350 (1520)
+...|+|++||+.+++ +++|+++|++|||+. +++|+|.+|++|+||||||+|..
T Consensus 5 ~~~~i~~~vNG~~~~~--~~~~~~~Ll~~LR~~-gltgtK~GC~~G~CGACtVlvdg~~v~SCl~~a~~~~G~~V~TiEG 81 (159)
T PRK09908 5 ETITIECTINGMPFQL--HAAPGTPLSELLREQ-GLLSVKQGCCVGECGACTVLVDGTAIDSCLYLAAWAEGKEIRTLEG 81 (159)
T ss_pred CceeEEEEECCEEEEE--ecCCCCcHHHHHHHc-CCCCCCCCcCCCCCCCcEEEECCcEeehhHhhHHHhCCCEEEeecC
Confidence 3456999999999988 689999999999986 99999999999999999999842
Q ss_pred ------CCCccccccccccccccccc----------------------------ccCccccccCCccchhhhhc
Q psy7003 351 ------SHPVTGVDSTYSVNACGDRC----------------------------FTRNICRCTGFRPILDAFQS 390 (1520)
Q Consensus 351 ------~hpvq~~~~~~~~~~Cg~~C----------------------------~~gNLCRCTgyrpIlda~~~ 390 (1520)
.||+|++.++.++.||| +| +.|||||||||++|+||.+.
T Consensus 82 l~~~~~l~pvQ~Af~~~~a~QCG-yCtPG~ims~~aLl~~~~~~~~s~~eI~~al~GNlCRCTGY~~I~~Av~~ 154 (159)
T PRK09908 82 EAKGGKLSHVQQAYAKSGAVQCG-FCTPGLIMATTAMLAKPREKPLTITEIRRGLAGNLCRCTGYQMIVNTVLD 154 (159)
T ss_pred CCCCCCCCHHHHHHHHcCCCcCC-CCCccHHHHHHHHHHcCCCCCCCHHHHHHHHcCCccCCCCCHHHHHHHHH
Confidence 29999999999999999 77 47999999999999998865
No 36
>TIGR03198 pucE xanthine dehydrogenase E subunit. This gene has been characterized in B. subtilis as the Iron-sulfur cluster binding-subunit of xanthine dehydrogenase (pucE), acting in conjunction with pucC, the FAD-binding subunit and pucD, the molybdopterin binding subunit. The more common XDH complex (GenProp0640) includes the xdhA gene as the Fe-S cluster binding component.
Probab=99.76 E-value=2.8e-19 Score=186.86 Aligned_cols=93 Identities=34% Similarity=0.686 Sum_probs=84.6
Q ss_pred ceEEEECCEEEEecccCCCCcchhHHHHhhhcccCccccccCCCccceeeeecc--------------------------
Q psy7003 297 TVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTS-------------------------- 350 (1520)
Q Consensus 297 ~~~f~~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~~g~cGactV~v~~-------------------------- 350 (1520)
.++|++||+.+++ ..+|+++|+++||++++++|+|.+|..|.||||||+|..
T Consensus 3 ~i~f~vNG~~~~~--~~~~~~~Ll~~LR~~~~ltgtK~gC~~G~CGACtVlvdG~~v~SCl~~~~~~~G~~v~TiEgl~~ 80 (151)
T TIGR03198 3 QFRFTVNGQAWEV--AAVPTTRLSDLLRKELQLTGTKVSCGIGRCGACSVLIDGKLANACLTMAYQADGHEITTIEGIAE 80 (151)
T ss_pred cEEEEECCEEEEe--ecCCCcHHHHHHHhccCCCCCCCCCCCCcCCccEEEECCcEEechHHHHHHhcCCEEEecCCcCC
Confidence 4899999999988 468999999999999999999999999999999999842
Q ss_pred --CCCccccccccccccccccc--------------------------ccCccccccCCccchhhhhccc
Q psy7003 351 --SHPVTGVDSTYSVNACGDRC--------------------------FTRNICRCTGFRPILDAFQSFS 392 (1520)
Q Consensus 351 --~hpvq~~~~~~~~~~Cg~~C--------------------------~~gNLCRCTgyrpIlda~~~~~ 392 (1520)
.||+|++.++.++.||| +| +.|||||||||++|+||.+.++
T Consensus 81 ~~l~pvQ~af~~~~a~QCG-fCtpG~im~~~~ll~~~p~p~~~ei~~al~gnlCRCtgY~~I~~Av~~~~ 149 (151)
T TIGR03198 81 NELDPCQTAFLEEGGFQCG-YCTPGMVVALKALFRETPQPSDEDMEEGLSGNLCRCTGYGGIIRSACRIR 149 (151)
T ss_pred CCCCHHHHHHHHcCCCcCC-CCCccHHHHHHHHHHcCCCCCHHHHHHHHcCCCcCCCCCHHHHHHHHHHh
Confidence 29999999999999999 88 4899999999999999988753
No 37
>TIGR02963 xanthine_xdhA xanthine dehydrogenase, small subunit. Members of this protein family are the small subunit (or, in eukaryotes, the N-terminal domain) of xanthine dehydrogenase, an enzyme of purine catabolism via urate. The small subunit contains both an FAD and a 2Fe-2S cofactor. Aldehyde oxidase (retinal oxidase) appears to have arisen as a neofunctionalization among xanthine dehydrogenases in eukaryotes and
Probab=99.75 E-value=6.1e-19 Score=215.40 Aligned_cols=90 Identities=47% Similarity=0.906 Sum_probs=82.1
Q ss_pred eEEEECCEEEEecccCCCCcchhHHHHhhhcccCccccccCCCccceeeee-----c-----cC----------------
Q psy7003 298 VRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTV-----T-----SS---------------- 351 (1520)
Q Consensus 298 ~~f~~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~~g~cGactV~v-----~-----~~---------------- 351 (1520)
|+|++||+.+++ .+++|++||++|||++++++|||++|++|+||||||+| + ..
T Consensus 1 i~~~~Ng~~~~~-~~~~~~~~ll~~lR~~~~l~g~k~gC~~G~CGaCtv~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i 79 (467)
T TIGR02963 1 IRFFLNGETVTL-SDVDPTRTLLDYLREDAGLTGTKEGCAEGDCGACTVVVGELVDGGKLRYRSVNACIQFLPSLDGKAV 79 (467)
T ss_pred CEEEECCEEEEe-ecCCCCCCHHHHHHHhcCCCCCCcccCCCCCCceEEEEEecCCCCcccceEEehhhhhHHhcCCCEE
Confidence 589999999987 36899999999999999999999999999999999999 3 11
Q ss_pred -------------CCccccccccccccccccc--------------------------ccCccccccCCccchhhhh
Q psy7003 352 -------------HPVTGVDSTYSVNACGDRC--------------------------FTRNICRCTGFRPILDAFQ 389 (1520)
Q Consensus 352 -------------hpvq~~~~~~~~~~Cg~~C--------------------------~~gNLCRCTgyrpIlda~~ 389 (1520)
||+|+++++.++.||| +| +.|||||||||++|+||++
T Consensus 80 ~TvEgl~~~~~~l~~~q~a~~~~~~~QCG-~CtpG~vm~~~~ll~~~~~~~~~~i~~~l~gnlCRCtgy~~i~~a~~ 155 (467)
T TIGR02963 80 VTVEDLRQPDGRLHPVQQAMVECHGSQCG-FCTPGFVMSLYALYKNSPAPSRADIEDALQGNLCRCTGYRPILDAAE 155 (467)
T ss_pred EecCCCCCCCCCCCHHHHHHHHcCCCcCC-CCchHHHHHHHHHHhcCCCCCHHHHHHHhcCCcccCCCCHHHHHHHH
Confidence 8999999999999999 88 4899999999999999873
No 38
>PLN00192 aldehyde oxidase
Probab=99.73 E-value=1.1e-18 Score=234.67 Aligned_cols=98 Identities=39% Similarity=0.868 Sum_probs=87.6
Q ss_pred CcceEEEECCEEEEecccCCCCcchhHHHHhhhcccCccccccCCCccceeeeec-------------------------
Q psy7003 295 SSTVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVT------------------------- 349 (1520)
Q Consensus 295 ~~~~~f~~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~~g~cGactV~v~------------------------- 349 (1520)
.++|+|++||+.+++ .+++|++||++|||++++|+|||++|++|+||||||+|+
T Consensus 3 ~~~i~~~vNg~~~~~-~~~~p~~~Ll~~LR~~~~ltgtK~gC~~G~CGaCtV~v~~~~~~~~~~~~~~v~sCl~~~~~~~ 81 (1344)
T PLN00192 3 NMSLVFAVNGERFEL-SSVDPSTTLLEFLRTQTPFKSVKLGCGEGGCGACVVLLSKYDPVLDQVEDFTVSSCLTLLCSVN 81 (1344)
T ss_pred cceEEEEECCEEEEe-ccCCCCCcHHHHHHHhhCCCCcCCCCCCCcCCCcEEEEeeccccccCcCCcEEehHHHHHHHhC
Confidence 457999999999987 468999999999999999999999999999999999993
Q ss_pred ---------------cCCCccccccccccccccccc--------------------------------------ccCccc
Q psy7003 350 ---------------SSHPVTGVDSTYSVNACGDRC--------------------------------------FTRNIC 376 (1520)
Q Consensus 350 ---------------~~hpvq~~~~~~~~~~Cg~~C--------------------------------------~~gNLC 376 (1520)
..||+|+++++.++.||| +| +.||||
T Consensus 82 g~~i~TvEgl~~~~~~lhpvq~a~~~~~~~QCG-fCtpG~vms~~~ll~~~~~~~~~~p~~~~~~~~~~~i~~~l~gnlC 160 (1344)
T PLN00192 82 GCSITTSEGLGNSKDGFHPIHKRFAGFHASQCG-FCTPGMCISLFSALVNADKTDRPEPPSGFSKLTVVEAEKAVSGNLC 160 (1344)
T ss_pred CCEEEeecCcCCCCCCCCHHHHHHHHcCCCccC-CCChHHHHHHHHHHHhcccccCCCcccccCCCCHHHHHHHhcCCce
Confidence 129999999999999998 55 248999
Q ss_pred cccCCccchhhhhcccCC
Q psy7003 377 RCTGFRPILDAFQSFSCD 394 (1520)
Q Consensus 377 RCTgyrpIlda~~~~~~~ 394 (1520)
|||||+||+||+++++.+
T Consensus 161 RCtgY~~i~~a~~~~~~~ 178 (1344)
T PLN00192 161 RCTGYRPIVDACKSFAAD 178 (1344)
T ss_pred eCCCCHHHHHHHHHHHhh
Confidence 999999999999998644
No 39
>TIGR02969 mam_aldehyde_ox aldehyde oxidase. Members of this family are mammalian aldehyde oxidase (EC 1.2.3.1) isozymes, closely related to xanthine dehydrogenase/oxidase.
Probab=99.73 E-value=1.6e-18 Score=232.89 Aligned_cols=96 Identities=42% Similarity=0.843 Sum_probs=87.7
Q ss_pred ceEEEECCEEEEecccCCCCcchhHHHHhhhcccCccccccCCCccceeeeecc-----------C--------------
Q psy7003 297 TVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTS-----------S-------------- 351 (1520)
Q Consensus 297 ~~~f~~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~~g~cGactV~v~~-----------~-------------- 351 (1520)
.|+|++||+.+.. .+++|++||++|||++++|+|||++|++|+||||||+|.. .
T Consensus 2 ~~~~~~Ng~~~~~-~~~~~~~~ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~ 80 (1330)
T TIGR02969 2 ELLFYVNGRKVVE-KNVDPETMLLPYLRKKLRLTGTKYGCGGGGCGACTVMISRYNPSTKSIRHHPVNACLTPICSLYGA 80 (1330)
T ss_pred cEEEEECCEEEEe-ccCCCCCcHHHHHHhhcCCCCCCCCcCCCCCCCcEEEECCccccccccCCcEEehhHHHHHHhCCC
Confidence 5899999999865 4789999999999999999999999999999999999952 1
Q ss_pred ---------------CCccccccccccccccccc--------------------------ccCccccccCCccchhhhhc
Q psy7003 352 ---------------HPVTGVDSTYSVNACGDRC--------------------------FTRNICRCTGFRPILDAFQS 390 (1520)
Q Consensus 352 ---------------hpvq~~~~~~~~~~Cg~~C--------------------------~~gNLCRCTgyrpIlda~~~ 390 (1520)
||+|++++..++.||| +| +.|||||||||++|+||+++
T Consensus 81 ~v~TvEgl~~~~~~l~pvq~a~~~~~~~QCG-fCtpG~vm~~~~ll~~~~~p~~~~i~~~l~gnlCRCtgY~~i~~a~~~ 159 (1330)
T TIGR02969 81 AVTTVEGIGSTRTRLHPVQERIAKCHGTQCG-FCTPGMVMSMYALLRNHPEPTLDQLTDALGGNLCRCTGYRPIIDACKT 159 (1330)
T ss_pred EEEecCCcCCCCCCCCHHHHHHHHcCCCcCC-CCchHHHHHHHHHHHcCCCCCHHHHHHHhcCCcccCCCCHHHHHHHHH
Confidence 8999999999999999 88 48999999999999999999
Q ss_pred ccCC
Q psy7003 391 FSCD 394 (1520)
Q Consensus 391 ~~~~ 394 (1520)
++.+
T Consensus 160 ~~~~ 163 (1330)
T TIGR02969 160 FCKT 163 (1330)
T ss_pred Hhhc
Confidence 8755
No 40
>PRK11433 aldehyde oxidoreductase 2Fe-2S subunit; Provisional
Probab=99.71 E-value=4.2e-18 Score=186.34 Aligned_cols=95 Identities=37% Similarity=0.661 Sum_probs=84.9
Q ss_pred CcceEEEECCEEEEecccCCCCcchhHHHHhhhcccCccccccCCCccceeeeecc------------------------
Q psy7003 295 SSTVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTS------------------------ 350 (1520)
Q Consensus 295 ~~~~~f~~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~~g~cGactV~v~~------------------------ 350 (1520)
...++|++||+.+.+ ++++++||+++||++.+++|+|.+|..|.||||||+|..
T Consensus 49 ~~~i~~~VNG~~~~~--~v~~~~tLLd~LR~~l~ltGtK~GC~~G~CGACTVlVdG~~v~SCl~la~~~~G~~ItTiEGL 126 (217)
T PRK11433 49 ISPVTLKVNGKTEQL--EVDTRTTLLDALREHLHLTGTKKGCDHGQCGACTVLVNGRRLNACLTLAVMHQGAEITTIEGL 126 (217)
T ss_pred CceEEEEECCEEEEE--ecCCCCcHHHHHHHhcCCCCCCCCCCCCCcCceEEEECCEEeeeeeeehhhcCCCEEEEeCCc
Confidence 356999999999887 578999999999999999999999999999999998732
Q ss_pred -----CCCcccccccccccccccccc-----------------------------------------cCccccccCCccc
Q psy7003 351 -----SHPVTGVDSTYSVNACGDRCF-----------------------------------------TRNICRCTGFRPI 384 (1520)
Q Consensus 351 -----~hpvq~~~~~~~~~~Cg~~C~-----------------------------------------~gNLCRCTgyrpI 384 (1520)
.||+|++.++.++.||| +|+ .|||||||||++|
T Consensus 127 ~~~~~lhpvQ~Af~~~~a~QCG-yCTPG~imsa~alL~~~~~~~~~~~~~~~~~~p~pt~~eIrealsGNlCRCtgY~~I 205 (217)
T PRK11433 127 GSPDNLHPMQAAFVKHDGFQCG-YCTPGQICSSVAVLKEIKDGIPSHVTVDLTAAPELTADEIRERMSGNICRCGAYSNI 205 (217)
T ss_pred CCCCCCCHHHHHHHHcCCCcCC-CCCccHHHHHHHHHHhccccCccccccccccCCCCCHHHHHHHHcCCccCCCCcHHH
Confidence 29999999999999999 662 4999999999999
Q ss_pred hhhhhccc
Q psy7003 385 LDAFQSFS 392 (1520)
Q Consensus 385 lda~~~~~ 392 (1520)
++|.+.++
T Consensus 206 v~Av~~~a 213 (217)
T PRK11433 206 LEAIEDVA 213 (217)
T ss_pred HHHHHHHH
Confidence 99988764
No 41
>COG2080 CoxS Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion]
Probab=99.67 E-value=2.3e-17 Score=171.38 Aligned_cols=91 Identities=40% Similarity=0.743 Sum_probs=82.6
Q ss_pred ceEEEECCEEEEecccCCCCcchhHHHHhhhcccCccccccCCCccceeeeecc--------------------------
Q psy7003 297 TVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTS-------------------------- 350 (1520)
Q Consensus 297 ~~~f~~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~~g~cGactV~v~~-------------------------- 350 (1520)
+++|++||+.+++ +++|+++|+++||+..+|+|||.+|..|.||||||+|..
T Consensus 3 ~i~ltvNG~~~~~--~~~p~~~Ll~~LRd~l~ltgtk~GC~~g~CGACtVlvDG~~v~SCl~~a~~~~G~~ItTiEGl~~ 80 (156)
T COG2080 3 PITLTVNGEPVEL--DVDPRTPLLDVLRDELGLTGTKKGCGHGQCGACTVLVDGEAVNSCLTLAVQAEGAEITTIEGLAK 80 (156)
T ss_pred cEEEEECCeEEEE--EeCCCChHHHHHHHhcCCCCcCCCCCCccCCceEEEECCeEehHHHHHHHHhCCCeEEEeecccC
Confidence 6899999999997 688999999999999999999999999999999998731
Q ss_pred ----CCCccccccccccccccccc--------------------------ccCccccccCCccchhhhhc
Q psy7003 351 ----SHPVTGVDSTYSVNACGDRC--------------------------FTRNICRCTGFRPILDAFQS 390 (1520)
Q Consensus 351 ----~hpvq~~~~~~~~~~Cg~~C--------------------------~~gNLCRCTgyrpIlda~~~ 390 (1520)
.||+|++..+.++.||| +| .+|||||||||..|+.|.+.
T Consensus 81 ~~~~l~~vQ~Af~e~~~~QCG-yCtpG~Imsa~~lL~~~~~ps~~eI~~~lsGnlCRCt~Y~~I~~Ai~~ 149 (156)
T COG2080 81 KDGGLHPVQQAFLEHDAFQCG-YCTPGQIMSATALLDRNPAPTDEEIREALSGNLCRCTGYQNIVAAILD 149 (156)
T ss_pred CCCCcCHHHHHHHHcCCCcCC-CCcHHHHHHHHHHHHhCCCCCHHHHHHHHhcCccccCCHHHHHHHHHH
Confidence 19999999999999999 77 48999999999999976654
No 42
>PRK09800 putative hypoxanthine oxidase; Provisional
Probab=99.55 E-value=1.8e-15 Score=197.85 Aligned_cols=90 Identities=16% Similarity=0.213 Sum_probs=81.8
Q ss_pred eEEEECCEEEEecccCCCCcchhHHHHhhhcccCcccc-ccCCCccceeeeecc--------------------------
Q psy7003 298 VRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYM-CREGGCGVCTVTVTS-------------------------- 350 (1520)
Q Consensus 298 ~~f~~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~-C~~g~cGactV~v~~-------------------------- 350 (1520)
|+|++||+.+.+ +++|+++|+++||+ ++++|+|.+ |..|.||||||+|..
T Consensus 3 i~~~vNg~~~~~--~~~~~~~l~~~LR~-~~~~~~k~g~c~~g~CGaCtv~~dg~~v~sC~~~~~~~~g~~i~Tvegl~~ 79 (956)
T PRK09800 3 IHFTLNGAPQEL--TVNPGENVQKLLFN-MGMHSVRNSDDGFGFAGSDAIIFNGNIVNASLLIAAQLEKADIRTAESLGK 79 (956)
T ss_pred EEEEECCEEEEE--ecCCCCCHHHHHHH-CCCCccccCCCCcccCCCCEEEECCeEEeHHHHHHHHcCCCEEEecCCcCC
Confidence 799999999887 47899999999999 999999997 788999999999832
Q ss_pred ---CCCccccccccccccccccc--------------------------ccCccccccCCccchhhhhcc
Q psy7003 351 ---SHPVTGVDSTYSVNACGDRC--------------------------FTRNICRCTGFRPILDAFQSF 391 (1520)
Q Consensus 351 ---~hpvq~~~~~~~~~~Cg~~C--------------------------~~gNLCRCTgyrpIlda~~~~ 391 (1520)
.||+|++.++.++.||| +| +.|||||||||++|++|.+..
T Consensus 80 ~~~~~~~q~af~~~~~~QCG-~CtpG~~m~~~~ll~~~~~p~~~~i~~~l~gnlCRCtgy~~i~~av~~~ 148 (956)
T PRK09800 80 WNELSLVQQAMVDVGVVQSG-YNDPAAALIITDLLDRIAAPTREEIDDALSGLFSRDAGWQQYYQVIELA 148 (956)
T ss_pred CCCCCHHHHHHHHcCCCcCC-CChHHHHHHHHHHHhcCCCCCHHHHHHHHhhchhccCCcHHHHHHHHHH
Confidence 29999999999999999 88 489999999999999998765
No 43
>PLN02906 xanthine dehydrogenase
Probab=99.53 E-value=1.6e-15 Score=204.32 Aligned_cols=77 Identities=48% Similarity=0.988 Sum_probs=70.6
Q ss_pred CcchhHHHHhhhcccCccccccCCCccceeeeecc----------------------------------------CCCcc
Q psy7003 316 GTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTS----------------------------------------SHPVT 355 (1520)
Q Consensus 316 ~~tll~~Lr~~~~l~gtk~~C~~g~cGactV~v~~----------------------------------------~hpvq 355 (1520)
++||++|||+ ++|+|||++|++|+||||||+|.. .||+|
T Consensus 1 ~~~ll~~LR~-~~l~g~k~gC~~g~CGaCtv~~~~~~~~~~~~~~~~v~sC~~~~~~~~g~~i~Tvegl~~~~~~~~~vq 79 (1319)
T PLN02906 1 HQTLLEYLRD-LGLTGTKLGCGEGGCGACTVMVSHYDRKTGKCVHYAVNACLAPLYSVEGMHVITVEGIGNRRDGLHPVQ 79 (1319)
T ss_pred CCcHHHHHHh-CCCCCCCCCcCCCCCCCeEEEECCccccCCccCCeEehhhHHHHHHhCCCEEEecCCCCCCCCCCCHHH
Confidence 4789999998 999999999999999999999961 19999
Q ss_pred ccccccccccccccc---------------------------ccCccccccCCccchhhhhcccCC
Q psy7003 356 GVDSTYSVNACGDRC---------------------------FTRNICRCTGFRPILDAFQSFSCD 394 (1520)
Q Consensus 356 ~~~~~~~~~~Cg~~C---------------------------~~gNLCRCTgyrpIlda~~~~~~~ 394 (1520)
+++++.++.||| +| +.|||||||||++|+||+++++.+
T Consensus 80 ~a~~~~~~~QCG-~CtpG~vm~~~~ll~~~~~~~~~~~i~~~l~gnlCRCtgy~~i~~a~~~~~~~ 144 (1319)
T PLN02906 80 EALASMHGSQCG-FCTPGFIMSMYALLRSSKTPPTEEQIEECLAGNLCRCTGYRPILDAFRVFAKT 144 (1319)
T ss_pred HHHHHcCCCcCC-CCchHHHHHHHHHHHhCCCCCCHHHHHHHhcCCcccCCCCHHHHHHHHHHHhc
Confidence 999999999999 88 489999999999999999998755
No 44
>TIGR03311 Se_dep_Molyb_1 selenium-dependent molybdenum hydroxylase 1. Members of this protein family show full length homology to the molybdenum-containing aldehyde oxido-reductase of Desulfovibrio gigas. Members, however, are found only within species that have, and near those genes that encode, a set of predicted accessory proteins for selenium-dependent molybdenum hydroxylases. The best known examples of such enzymes are forms of xanthine dehydrogenase and purine hydroxylase; this family appears to be another such enzyme.
Probab=99.52 E-value=3.6e-15 Score=193.85 Aligned_cols=89 Identities=36% Similarity=0.694 Sum_probs=79.4
Q ss_pred eEEEECCEEEEecccCCCCcchhHHHHhhhcccCccccccCCCccceeeeecc---------------------------
Q psy7003 298 VRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTS--------------------------- 350 (1520)
Q Consensus 298 ~~f~~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~~g~cGactV~v~~--------------------------- 350 (1520)
.+|++||+.. +++|+++|+++||++++|+|+|.+|..|.||||||+|..
T Consensus 1 ~~~~~ng~~~----~~~~~~~l~~~lr~~~~~~~~k~gc~~g~cgactv~~dg~~~~sc~~~~~~~~g~~i~T~egl~~~ 76 (848)
T TIGR03311 1 YEFIVNGREV----DVNEEKKLLEFLREDLRLTGVKNGCGEGACGACTVIVNGKAVRACRFTTAKLAGKEITTVEGLTER 76 (848)
T ss_pred CEEEECCEEe----eCCCCCcHHHHHHHhcCCCcCCCCCCCCCCCCcEEEECCeEEehhhhhHHhcCCCEEEecCCCCCC
Confidence 3799999743 457999999999999999999999999999999999832
Q ss_pred -CCCccccccccccccccccc--------------------------ccCccccccCCccchhhhhcc
Q psy7003 351 -SHPVTGVDSTYSVNACGDRC--------------------------FTRNICRCTGFRPILDAFQSF 391 (1520)
Q Consensus 351 -~hpvq~~~~~~~~~~Cg~~C--------------------------~~gNLCRCTgyrpIlda~~~~ 391 (1520)
.||+|++.++.++.||| +| +.|||||||||++|++|.+..
T Consensus 77 ~~~~~q~a~~~~~~~qcG-~ctpg~~~~~~~ll~~~~~p~~~~i~~~l~gnlcrctgy~~i~~a~~~~ 143 (848)
T TIGR03311 77 EKDVYAWAFAKAGAVQCG-FCIPGMVISAKALLDKNPNPTEAEIKKALKGNICRCTGYVKIIKAVRLA 143 (848)
T ss_pred CCCHHHHHHHHcCCCcCC-CCchhHHHHHHHHHhcCCCCCHHHHHHHHhcCccccCChHHHHHHHHHH
Confidence 18999999999999999 88 489999999999999988764
No 45
>TIGR03313 Se_sel_red_Mo probable selenate reductase, molybdenum-binding subunit. Our comparative genomics suggests this protein family to be a subunit of a selenium-dependent molybdenum hydroxylase, although the substrate is not specified. This protein is suggested by Bebien, et al., to be the molybdenum-binding subunit of a molydbopterin-containing selenate reductase. Xi, et al, however, show that mutation of this gene in E. coli conferred sensitivity to adenine, suggesting a defect in purine interconversion. This finding, plus homology of nearby genes in a 23-gene purine catabolism region in E. coli to xanthine dehydrogase subunits suggests xanthine dehydrogenase activity.
Probab=99.47 E-value=1.6e-14 Score=189.25 Aligned_cols=88 Identities=15% Similarity=0.180 Sum_probs=79.5
Q ss_pred EEECCEEEEecccCCCCcchhHHHHhhhcccCccc-cccCCCccceeeeecc----------------------------
Q psy7003 300 FTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKY-MCREGGCGVCTVTVTS---------------------------- 350 (1520)
Q Consensus 300 f~~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~-~C~~g~cGactV~v~~---------------------------- 350 (1520)
|++||+.+.+ +++|+++|+++||+. +++|+|. +|..|.||||||+|..
T Consensus 1 ~~~Ng~~~~~--~~~~~~~l~~~LR~~-~l~~~k~~~c~~g~CGaCtv~~dg~~v~sC~~~~~~~~g~~i~Tiegl~~~~ 77 (951)
T TIGR03313 1 FTLNGAPQTL--ECKLGENVQTLLFNM-GMHSVRNSDDGFGFAGSDAILFNGVLKNASLLIAAQLEGAEVRTAESLGQWN 77 (951)
T ss_pred CEECCEEEEE--ecCCCCCHHHHHHHC-CCCCCcCCCCCcccCCCCEEEECCeEeeHHHHHHHHcCCCEEEecCcCCCCC
Confidence 6899999987 578999999999996 9999999 7999999999999842
Q ss_pred -CCCccccccccccccccccc--------------------------ccCccccccCCccchhhhhcc
Q psy7003 351 -SHPVTGVDSTYSVNACGDRC--------------------------FTRNICRCTGFRPILDAFQSF 391 (1520)
Q Consensus 351 -~hpvq~~~~~~~~~~Cg~~C--------------------------~~gNLCRCTgyrpIlda~~~~ 391 (1520)
.||+|++.+..++.||| +| +.|||||||||++|++|.+..
T Consensus 78 ~~~~~q~af~~~~a~QCG-~CtpG~~~~~~~ll~~~~~p~~~~i~~~l~gnlcrctgy~~i~~av~~~ 144 (951)
T TIGR03313 78 QLSLVQQAMVDVGVVQSG-YNDPAAALILTDLLDRNTQPNRAEIDDALSGLFSRDAGYQQFYQVIELA 144 (951)
T ss_pred CCCHHHHHHHHcCCCcCC-CChHHHHHHHHHHHhcCCCCCHHHHHHHHhcceeccCCcHHHHHHHHHH
Confidence 29999999999999999 88 489999999999999988764
No 46
>COG1529 CoxL Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion]
Probab=99.34 E-value=2.8e-13 Score=174.35 Aligned_cols=348 Identities=16% Similarity=0.101 Sum_probs=224.7
Q ss_pred eEEEEEEEECccccCCCCCCeeEEEEeCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCC-CCCCCCchH
Q psy7003 954 FKIKGAAEFGPQYHYTMEGQTALCVPSEDGVDIYAASQWVTLVQESVAGVLGLPNNRVNVKTRRIGGGYG-AKLSRSCYP 1032 (1520)
Q Consensus 954 ~vveg~~~~~~q~H~~mEp~~a~A~~~ed~l~V~~sTQ~p~~vq~~vA~~LGlp~~kVrV~~~~vGGgFG-~K~~~~~~~ 1032 (1520)
+.++..|..++..|..||| ++.....++. ..||.+...++.+|+.|||++.+||++...-+|+|| ++...+.+.
T Consensus 323 Y~i~~~~~~~~~v~tn~~p-~~~~Rg~g~~----~~~~a~E~~~d~lA~~Lgidp~eiR~~n~~~~g~~~~~~~~~~~~~ 397 (731)
T COG1529 323 YKIEAVYIEPYLVHTNMPP-NGAYRGAGRP----EGTFALERAVDELAEELGIDPVEIRLRNLIRGGPFGLGRRYDSGDY 397 (731)
T ss_pred eecccceeeeEEEEcCCCC-CcccccCCCc----hhHHHHHHHHHHHHHHhCCCHHHHhhhhccccCCCCCcccccCccH
Confidence 7899999999999999999 6555544444 899999999999999999999999999999999999 554444445
Q ss_pred HHHHHHHHHhcC---CcEEEEcChHHHHhccCCCCcEEEEEeeeccCCCccccccCCCccchhhhhhhhccceeeecccc
Q psy7003 1033 AVIAAVCSNVIN---KPVRIVMSIESMMGALGGRYPVYATYEIGTIGGNLSIKHEHPEFSSDVFLLLEVVGATITIRDTF 1109 (1520)
Q Consensus 1033 ~~~AAlaA~~~g---RPVrl~~sRee~m~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1109 (1520)
...+..++++.+ ||+|..|+|++++....++.-+..... +
T Consensus 398 ~~~~~~~ak~~~~~~~~~k~~~~re~~~~~G~g~a~~~~~~~-------------------------------------~ 440 (731)
T COG1529 398 LEELDEAAKRFGWSERPVKPIWTREGDLRRGVGRAMYTEPSG-------------------------------------A 440 (731)
T ss_pred HHHHHHHHHhcCcccccCChhhhhcCCeeeeeEEEEEEEecc-------------------------------------C
Confidence 556667778776 999999999999887766654433220 0
Q ss_pred ccccccCcchhhhhccccceeeeeecccccccccccccceeeeCCCCcEEEEEEEEEEecCCCcccchhhhHhhcccCCC
Q psy7003 1110 GLEQTVSPEEYLSIDMNKKVITYITFCPLIKNSYYLRTYKCGVDKNGVIQNLSTVFNVDKGMTLNENGFLHVRFGLGQAS 1189 (1520)
Q Consensus 1110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~g~d~dG~i~al~~~~~~d~Ga~~~~~~~~~~~~~~~~~~ 1189 (1520)
+. . ...++-++.||++....... +.|.-. ...... ...-
T Consensus 441 ~~------~---------------------------~~a~v~~~~~g~v~v~~g~~--~~G~G~-----~t~~~q-~~ae 479 (731)
T COG1529 441 GP------G---------------------------EGARVRLEADGTVTVRTGAT--DIGQGT-----DTVLAQ-IAAE 479 (731)
T ss_pred CC------C---------------------------CcEEEEEcCCCcEEEEECCc--cCCCcH-----HHHHHH-HHHH
Confidence 00 0 11266778888876554221 223211 111111 1467
Q ss_pred CCCCCceEEEEEEEecCCCCCcccCCCCchhHHHHHHHHHHHHHHHhCCCHHHHHHHhcCCchHHHHHHHHHhccChHHH
Q psy7003 1190 IYDPSTFRVVANAVRTDKPTYGFTRSPGACEVTAFIEHVMDHIATVVNRDPTDVRIANLRNEDVKKFYQQFRGSVKYKER 1269 (1520)
Q Consensus 1190 ~Y~ipn~r~~~~~v~TN~p~~ga~Rg~G~~q~~fa~E~~mD~iA~~lg~DP~e~R~~Nl~~~~~~~~~~~~~~~~~~~~r 1269 (1520)
.|.||+-+++.....|..+ ..+||++|+....|+.|.++++++...++||..+|+..-.+.. ...++.......|..+
T Consensus 480 ~lgip~~~V~v~~gDt~~~-~~~~~s~GS~~~~~~~~A~~~a~~~l~~k~~~~aa~~l~~~~~-~~~~~~g~~~~~~~~~ 557 (731)
T COG1529 480 ELGIPPDDVEVVHGDTDVP-VGGWGSVGSRGTAVAGSAVIDAAAKLAEKDPVAAARMLGADAE-DVVLEDGAFKVGGGDR 557 (731)
T ss_pred HhCCCHHHEEEEecCCCCC-CCCCCCcCcccccchHHHHHHHHHHHHHHHHHHHHhhhCCChh-HeeeccCeeeeccCCc
Confidence 7999999998888899887 4789999999999999999999999999999999998722211 1133333333444322
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhhccCCccccccceEEEEeccC-C-CCcceEEEEEEcCCCeEEEE--ecCcccCcchHH
Q psy7003 1270 RDAIETFNAVRVLISQYSLRHCFQNNRWRKRGISAVVTLFPLG-F-YDVSYAILSVFRRDATVAIT--TSGIEIGQGLHT 1345 (1520)
Q Consensus 1270 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~~krGig~~~~~~~~g-~-~~~~~a~v~v~~~DGsV~i~--~g~~e~GQG~~T 1345 (1520)
...+ ++.+. .++-+.+|+.+........ + +...-+.|+|-..+|+|.|. ....|.|.=++-
T Consensus 558 ~~~~-------------~~~~~--a~~~~~~~~~~~~~~~~~~~~~~~A~~~EV~Vd~~tG~vrV~r~~~~~D~G~vvNP 622 (731)
T COG1529 558 RSAV-------------SLKEV--AGKGLAPGLAVAASFGSDNTYPYGAHIAEVEVDPETGEVRVLRVVAVDDCGRVVNP 622 (731)
T ss_pred ccee-------------eHHHh--hhccccCcccccccccccccccceeEEEEEEEECCCCcEEEEEEEEEEecCCccCH
Confidence 1100 00000 0100234444433211111 1 23345778874469988887 688898886665
Q ss_pred HH--HHH-------HHHHhC--------------------------CCCCcEEEecCCCCCCCCCCCCcccccccchHHH
Q psy7003 1346 KV--AQA-------CAYELG--------------------------IPIEKIVLKPAQNNIFPNAANTGGSTASDNAARC 1390 (1520)
Q Consensus 1346 ~~--aQi-------aA~~Lg--------------------------ip~e~I~v~~~dT~~~p~~~~t~gS~~t~~~g~A 1390 (1520)
++ .|+ +...|- +|.=.|++.+......|....-.|=.++.-.+.|
T Consensus 623 ~~~~~Qv~GGi~~Gig~aL~E~~i~d~~g~~~~~n~~dY~ip~~~d~P~iev~~v~~p~~~~p~g~kGvGE~g~~~~~pA 702 (731)
T COG1529 623 KLAEGQVEGGILMGIGMALYEEAIYDEDGQLLNSNLADYGIPRAADAPEVEVEFVESPSPFGPLGAKGVGEGGIIGIAPA 702 (731)
T ss_pred HHHHHHHHhHHHHHHHHHhhccceECCCCCcCCCCcccccCCCcccCCceEEEEecCCCCCCCCCCCCcCcCccCchhHH
Confidence 54 232 222221 2333333333222334666666666777778888
Q ss_pred HHHHHHHHHHH
Q psy7003 1391 ILLCCQELKTR 1401 (1520)
Q Consensus 1391 v~~Ac~~l~~r 1401 (1520)
+.+|-..+-.|
T Consensus 703 vaNAV~~AtGk 713 (731)
T COG1529 703 IANAVFDATGK 713 (731)
T ss_pred HHHHHHHHhCC
Confidence 88887766443
No 47
>PRK12386 fumarate reductase iron-sulfur subunit; Provisional
Probab=98.99 E-value=5.2e-10 Score=127.15 Aligned_cols=77 Identities=21% Similarity=0.418 Sum_probs=67.6
Q ss_pred EEEEEcccCCCCCchHHHHHhhcCC-----CCCcCCCCCCCCCeeEEEECCccCCCCcccccccccchhhHHhcCCcEEE
Q psy7003 29 VVYIIGAEVPPGTRLVDFIRDYARL-----KGTKYMCREGGCGVCTVTVTSSHPVTGVDSTYSVNACLVLVHMCGGWAIT 103 (1520)
Q Consensus 29 ~~~~~~~~~~~~~~l~~~lr~~~~l-----~g~k~~c~~g~cGactv~~~~~~~~~~~~~~~~v~scl~~~~~~~g~~i~ 103 (1520)
+.|++ ++++++||||+||+ ++. .++|.||++|.||+|+|+|||. +++||.+++..+.|.+++
T Consensus 20 q~y~v--~~~~~~tvLd~L~~-i~~~~d~~l~~r~~C~~g~CGsCa~~InG~----------p~laC~t~~~~~~~~~~i 86 (251)
T PRK12386 20 QDYTV--EVNEGEVVLDVIHR-LQATQAPDLAVRWNCKAGKCGSCSAEINGR----------PRLMCMTRMSTFDEDETV 86 (251)
T ss_pred EEEEE--eCCCCCCHHHHHHH-hccccCCCCcccCCCCCCcCCCCEEEECcc----------EeccHHhHHHHhCCCCeE
Confidence 56777 68999999999998 788 4999999999999999999996 899999999999998999
Q ss_pred EecCCCCCCCCCCHHHHHHH
Q psy7003 104 TVEGLGSKKKGYHNVQTRLA 123 (1520)
Q Consensus 104 T~eg~~~~~~~~h~vq~~~~ 123 (1520)
|||+|.+ .||.+-|+
T Consensus 87 tiepl~~-----fpVikDLv 101 (251)
T PRK12386 87 TVTPMRT-----FPVIRDLV 101 (251)
T ss_pred EEccCCC-----CCccccce
Confidence 9999974 34555443
No 48
>PRK05950 sdhB succinate dehydrogenase iron-sulfur subunit; Reviewed
Probab=98.47 E-value=1.8e-07 Score=105.83 Aligned_cols=69 Identities=19% Similarity=0.295 Sum_probs=60.0
Q ss_pred EEEEEcccCC-CCCchHHHHHhhc----CCCCCcCCCCCCCCCeeEEEECCccCCCCcccccccccchhhHHhcCCcEEE
Q psy7003 29 VVYIIGAEVP-PGTRLVDFIRDYA----RLKGTKYMCREGGCGVCTVTVTSSHPVTGVDSTYSVNACLVLVHMCGGWAIT 103 (1520)
Q Consensus 29 ~~~~~~~~~~-~~~~l~~~lr~~~----~l~g~k~~c~~g~cGactv~~~~~~~~~~~~~~~~v~scl~~~~~~~g~~i~ 103 (1520)
+.+.+ +++ +++||+++|+..- +..+.+.+|++|.||+|+|.|||. ++.||.+++..+ |.++.
T Consensus 18 ~~~~v--~~~~~~~tvl~~L~~~~~~~~~~l~~~~~c~~g~Cg~C~v~vnG~----------~~laC~t~~~~~-~~~~~ 84 (232)
T PRK05950 18 QTYEV--DVDECGPMVLDALIKIKNEIDPTLTFRRSCREGVCGSDAMNINGK----------NGLACITPISDL-KKGKI 84 (232)
T ss_pred EEEEe--CCCCCCCHHHHHHHHhCCccCCcceeeCCCCCCCCCCCEEEECCc----------CccchhChHhHc-CCCeE
Confidence 45566 688 9999999999752 478899999999999999999996 788999999999 56788
Q ss_pred EecCCCC
Q psy7003 104 TVEGLGS 110 (1520)
Q Consensus 104 T~eg~~~ 110 (1520)
|||+|.+
T Consensus 85 tiepl~~ 91 (232)
T PRK05950 85 VIRPLPG 91 (232)
T ss_pred EEEECCC
Confidence 9999975
No 49
>PF01799 Fer2_2: [2Fe-2S] binding domain; InterPro: IPR002888 The [2Fe-2S] binding domain is found in a range of enzymes including dehydrogenases, oxidases and oxidoreductases. The aldehyde oxido-reductase (Mop) from the sulphate reducing anaerobic Gram-negative bacterium Desulfovibrio gigas is a homodimer of 907 amino acid residues subunits and is a member of the xanthine oxidase family. The protein contains a molybdopterin cofactor (Mo-co) and two different [2Fe-2S] centres. It is folded into four domains of which the first two bind the iron sulphur centres and the last two are involved in Mo-co binding. Mo-co is a molybdenum molybdopterin cytosine dinucleotide. Molybdopterin forms a tricyclic system with the pterin bicycle annealed to a pyran ring. The molybdopterin dinucleotide is deeply buried in the protein. The cis-dithiolene group of the pyran ring binds the molybdenum, which is coordinated by three more (oxygen) ligands [].; GO: 0016491 oxidoreductase activity, 0046872 metal ion binding, 0055114 oxidation-reduction process; PDB: 2E3T_A 1WYG_A 3AN1_B 2E1Q_C 2CKJ_A 3B9J_I 3NVY_J 1FO4_B 3NRZ_J 3AM9_A ....
Probab=98.34 E-value=9.5e-08 Score=89.79 Aligned_cols=39 Identities=38% Similarity=0.909 Sum_probs=29.4
Q ss_pred cCCCccccccccccccccccc--------------------------ccCccccccCCccchhhhh
Q psy7003 350 SSHPVTGVDSTYSVNACGDRC--------------------------FTRNICRCTGFRPILDAFQ 389 (1520)
Q Consensus 350 ~~hpvq~~~~~~~~~~Cg~~C--------------------------~~gNLCRCTgyrpIlda~~ 389 (1520)
..||+|++.+..++.||| +| +.|||||||||++|++|.+
T Consensus 10 ~~~~iq~af~~~~a~QCG-fCtpG~im~~~~ll~~~~~p~~~ei~~al~gnlCRCTgY~~I~~Av~ 74 (75)
T PF01799_consen 10 ELHPIQQAFVEHGAVQCG-FCTPGMIMAAYALLRRNPDPTEEEIREALSGNLCRCTGYRPIVEAVR 74 (75)
T ss_dssp B--HHHHHHHHTT--SSS-SSHHHHHHHHHHHHHHSSS-CHHHHHHHTTTS--SSSTSHHHHHHHH
T ss_pred CcCHHHHHHHHhCCCcCC-cchHHHHHHHHHHhhcccchhhHHHHHHHHcCccCCCCcHHHHHHHh
Confidence 468999999999999998 87 4899999999999998765
No 50
>TIGR00384 dhsB succinate dehydrogenase and fumarate reductase iron-sulfur protein. Succinate dehydrogenase and fumarate reductase are reverse directions of the same enzymatic interconversion, succinate + FAD+ = fumarate + FADH2 (EC 1.3.11.1). In E. coli, the forward and reverse reactions are catalyzed by distinct complexes: fumarate reductase operates under anaerobic conditions and succinate dehydrogenase operates under aerobic conditions. This model also describes a region of the B subunit of a cytosolic archaeal fumarate reductase.
Probab=98.28 E-value=7.7e-07 Score=99.95 Aligned_cols=69 Identities=25% Similarity=0.425 Sum_probs=60.2
Q ss_pred EEEEEcccCCCCCchHHHHHhh----cCCCCCcCCCCCCCCCeeEEEECCccCCCCcccccccccchhhHHhcCCcEEEE
Q psy7003 29 VVYIIGAEVPPGTRLVDFIRDY----ARLKGTKYMCREGGCGVCTVTVTSSHPVTGVDSTYSVNACLVLVHMCGGWAITT 104 (1520)
Q Consensus 29 ~~~~~~~~~~~~~~l~~~lr~~----~~l~g~k~~c~~g~cGactv~~~~~~~~~~~~~~~~v~scl~~~~~~~g~~i~T 104 (1520)
+.|++ ++++++||+++|+.. .+..+.+.+|++|.||+|+|.|||. ++.||.+++..+ |..+.|
T Consensus 15 ~~~~v--~~~~~~tvl~~l~~i~~~~~~~l~~~~~C~~g~Cg~C~v~vnG~----------~~laC~t~v~~~-g~~~~~ 81 (220)
T TIGR00384 15 QSYEV--PADEGMTVLDALNYIKDEQDPSLAFRRSCRNGICGSCAMNVNGK----------PVLACKTKVEDL-GQPVMK 81 (220)
T ss_pred EEEEE--eCCCCCcHHHHHHHHHHhcCCCceeecccCCCCCCCCeeEECCE----------EhhhhhChHHHc-CCCcEE
Confidence 56677 688999999999862 2567889999999999999999995 788999999988 888999
Q ss_pred ecCCCC
Q psy7003 105 VEGLGS 110 (1520)
Q Consensus 105 ~eg~~~ 110 (1520)
||+|.+
T Consensus 82 iepl~~ 87 (220)
T TIGR00384 82 IEPLPN 87 (220)
T ss_pred EeeCCC
Confidence 999974
No 51
>PRK12576 succinate dehydrogenase iron-sulfur subunit; Provisional
Probab=98.28 E-value=8.6e-07 Score=102.90 Aligned_cols=70 Identities=20% Similarity=0.294 Sum_probs=58.8
Q ss_pred EEEEEcccCCCCCchHHHHHh---hcC-CCCCcCCCCCCCCCeeEEEECCccCCCCcccccccccchhhHHhc--CCcEE
Q psy7003 29 VVYIIGAEVPPGTRLVDFIRD---YAR-LKGTKYMCREGGCGVCTVTVTSSHPVTGVDSTYSVNACLVLVHMC--GGWAI 102 (1520)
Q Consensus 29 ~~~~~~~~~~~~~~l~~~lr~---~~~-l~g~k~~c~~g~cGactv~~~~~~~~~~~~~~~~v~scl~~~~~~--~g~~i 102 (1520)
+.+.+ ++++++||||+|+. +.. --+.+.+|++|.||+|+|.|||. ++.||.+++..+ ++..+
T Consensus 25 ~~~~v--~~~~~~tvLd~L~~i~~~~d~tl~~~~~C~~G~CgsC~v~ING~----------~~laC~t~v~~~~~~~~~~ 92 (279)
T PRK12576 25 QEYKV--KVDRFTQVTEALRRIKEEQDPTLSYRASCHMAVCGSCGMKINGE----------PRLACKTLVLDVAKKYNSV 92 (279)
T ss_pred EEEEE--ecCCCCHHHHHHHHhCCccCCCceecCCCCCCCCCCCEEEECCc----------EeccccCcHHHhhcCCCCc
Confidence 45666 68999999999987 232 23679999999999999999996 789999999998 35678
Q ss_pred EEecCCCC
Q psy7003 103 TTVEGLGS 110 (1520)
Q Consensus 103 ~T~eg~~~ 110 (1520)
+|||+|.+
T Consensus 93 ~tiePl~~ 100 (279)
T PRK12576 93 ITIEPMDY 100 (279)
T ss_pred EEEEECCC
Confidence 89999985
No 52
>PF13085 Fer2_3: 2Fe-2S iron-sulfur cluster binding domain; PDB: 3P4Q_N 1KFY_N 3CIR_N 3P4R_B 2B76_N 1KF6_B 3P4P_N 3P4S_B 1L0V_B 1ZOY_B ....
Probab=98.03 E-value=8.4e-06 Score=82.17 Aligned_cols=70 Identities=26% Similarity=0.438 Sum_probs=54.4
Q ss_pred EEEEEcccCCCCCchHHHHH---hh-cCCCCCcCCCCCCCCCeeEEEECCccCCCCcccccccccchhhHHhcCCcE--E
Q psy7003 29 VVYIIGAEVPPGTRLVDFIR---DY-ARLKGTKYMCREGGCGVCTVTVTSSHPVTGVDSTYSVNACLVLVHMCGGWA--I 102 (1520)
Q Consensus 29 ~~~~~~~~~~~~~~l~~~lr---~~-~~l~g~k~~c~~g~cGactv~~~~~~~~~~~~~~~~v~scl~~~~~~~g~~--i 102 (1520)
+.|++ ++++++|+||.|. ++ -+--..+++|++|.||+|.|.|||. ++.+|.+.+-...+.. .
T Consensus 19 ~~y~v--~~~~~~tVLd~L~~Ik~~~D~sLafr~sCr~giCGsCam~ING~----------~~LAC~t~v~~~~~~~~~~ 86 (110)
T PF13085_consen 19 QEYEV--PVEPGMTVLDALNYIKEEQDPSLAFRYSCRSGICGSCAMRINGR----------PRLACKTQVDDLIEKFGNV 86 (110)
T ss_dssp EEEEE--EGGSTSBHHHHHHHHHHHT-TT--B--SSSSSSSSTTEEEETTE----------EEEGGGSBGGGCTTSETBE
T ss_pred EEEEe--cCCCCCcHHHHHHHHHhccCCCeEEEecCCCCCCCCCEEEECCc----------eecceeeEchhccCCCcce
Confidence 45677 6789999999884 33 2445678999999999999999996 8999999999998663 6
Q ss_pred EEecCCCC
Q psy7003 103 TTVEGLGS 110 (1520)
Q Consensus 103 ~T~eg~~~ 110 (1520)
.|||-|.+
T Consensus 87 i~IePL~~ 94 (110)
T PF13085_consen 87 ITIEPLPN 94 (110)
T ss_dssp EEEEESTT
T ss_pred EEEEECCC
Confidence 78999975
No 53
>PF13510 Fer2_4: 2Fe-2S iron-sulfur cluster binding domain; PDB: 1Y56_A 3ADA_A 1VRQ_A 1X31_A 3AD9_A 3AD8_A 3AD7_A 2GAG_A 2GAH_A.
Probab=98.02 E-value=1.1e-05 Score=77.25 Aligned_cols=71 Identities=28% Similarity=0.481 Sum_probs=49.2
Q ss_pred eEEEEEECCEEEEEcccCCCCCchHHHHHhh-cC---CCCC----cCCCCCCCCCeeEEEECCccCCCCcccccccccch
Q psy7003 20 STVRFTINGVVYIIGAEVPPGTRLVDFIRDY-AR---LKGT----KYMCREGGCGVCTVTVTSSHPVTGVDSTYSVNACL 91 (1520)
Q Consensus 20 ~~~~~~ing~~~~~~~~~~~~~~l~~~lr~~-~~---l~g~----k~~c~~g~cGactv~~~~~~~~~~~~~~~~v~scl 91 (1520)
..|+|+|||+++++ .++.||+++|+.. .. +... ..-|..|.|+.|.|.|+|. ..+.||.
T Consensus 2 ~~v~i~idG~~v~~----~~G~til~al~~~gi~ip~~c~~~~~r~~~~~~g~C~~C~Vev~g~---------~~v~AC~ 68 (82)
T PF13510_consen 2 KMVTITIDGKPVEV----PPGETILEALLAAGIDIPRLCYHGRPRGGLCPIGSCRLCLVEVDGE---------PNVRACS 68 (82)
T ss_dssp EEEEEEETTEEEEE----EET-BHHHHHHHTT--B-EETTTS-EEBSSSSSTT-SS-EEEESSE---------EEEETTT
T ss_pred CEEEEEECCEEEEE----cCCCHHHHHHHHCCCeEEEeeeccCcccccCCccccceEEEEECCC---------cceEccc
Confidence 46999999999875 4899999999863 22 2233 4447889999999999986 2389999
Q ss_pred hhHHhcCCcEEEEe
Q psy7003 92 VLVHMCGGWAITTV 105 (1520)
Q Consensus 92 ~~~~~~~g~~i~T~ 105 (1520)
+++. +|..|.|-
T Consensus 69 t~v~--~GM~V~T~ 80 (82)
T PF13510_consen 69 TPVE--DGMVVETQ 80 (82)
T ss_dssp -B----TTEEEE--
T ss_pred CCCc--CCcEEEEe
Confidence 9986 79999874
No 54
>PRK12385 fumarate reductase iron-sulfur subunit; Provisional
Probab=97.90 E-value=1.3e-05 Score=91.47 Aligned_cols=68 Identities=25% Similarity=0.429 Sum_probs=55.6
Q ss_pred EEEEEcccCCCCCchHHHH---HhhcCCC-CCcCCCCCCCCCeeEEEECCccCCCCcccccccccchhhHHhcCCcEEEE
Q psy7003 29 VVYIIGAEVPPGTRLVDFI---RDYARLK-GTKYMCREGGCGVCTVTVTSSHPVTGVDSTYSVNACLVLVHMCGGWAITT 104 (1520)
Q Consensus 29 ~~~~~~~~~~~~~~l~~~l---r~~~~l~-g~k~~c~~g~cGactv~~~~~~~~~~~~~~~~v~scl~~~~~~~g~~i~T 104 (1520)
+.|.+ ++++++|||+.| +++...+ +.+.+|++|.||+|+|.|||. ++.+|.+++..+.+. .|
T Consensus 25 ~~~~v--~~~~~~tvl~~L~~ik~~~d~~l~fr~~C~~giCGsC~v~InG~----------~~laC~t~~~~~~~~--~~ 90 (244)
T PRK12385 25 QTYEV--PYDETTSLLDALGYIKDNLAPDLSYRWSCRMAICGSCGMMVNNV----------PKLACKTFLRDYTGG--MK 90 (244)
T ss_pred EEEEe--eCCCCCcHHHHHHHHHHhcCCCceeccCCCCCcCCCCcceECcc----------ChhhHhhHHHHcCCC--eE
Confidence 45666 678999999999 5555555 778999999999999999996 789999999987532 57
Q ss_pred ecCCCC
Q psy7003 105 VEGLGS 110 (1520)
Q Consensus 105 ~eg~~~ 110 (1520)
||-|.+
T Consensus 91 iePl~~ 96 (244)
T PRK12385 91 VEALAN 96 (244)
T ss_pred EeeCCC
Confidence 888863
No 55
>cd00207 fer2 2Fe-2S iron-sulfur cluster binding domain. Iron-sulfur proteins play an important role in electron transfer processes and in various enzymatic reactions. The family includes plant and algal ferredoxins, which act as electron carriers in photosynthesis and ferredoxins, which participate in redox chains (from bacteria to mammals). Fold is ismilar to thioredoxin.
Probab=97.79 E-value=2e-05 Score=74.58 Aligned_cols=69 Identities=33% Similarity=0.556 Sum_probs=52.6
Q ss_pred EEEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEECCccCCCC--------cccccccccchhh
Q psy7003 22 VRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTSSHPVTG--------VDSTYSVNACLVL 93 (1520)
Q Consensus 22 ~~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~~~~~~~~~--------~~~~~~v~scl~~ 93 (1520)
|+|..||....+ +++++++|+++|++ .|+. ..++|+.|.||+|.|.|..-+.... ......+.+|.+.
T Consensus 1 v~~~~~~~~~~~--~~~~g~~ll~al~~-~g~~-~~~~C~~g~Cg~C~v~v~~G~~~~~~~~~~~~~~~~~~~~LaC~~~ 76 (84)
T cd00207 1 VTINVPGSGVEV--EVPEGETLLDAARE-AGID-IPYSCRAGACGTCKVEVVEGEVDQSDPSLLDEEEAEGGYVLACQTR 76 (84)
T ss_pred CEEecCCCCEEE--EECCCCcHHHHHHH-cCCC-cccCCCCcCCcCCEEEEeeCccccCcccCCCHHHHhCCeEEEEeCe
Confidence 468888777777 68899999999998 5887 9999999999999999975322211 1123467888876
Q ss_pred H
Q psy7003 94 V 94 (1520)
Q Consensus 94 ~ 94 (1520)
+
T Consensus 77 ~ 77 (84)
T cd00207 77 V 77 (84)
T ss_pred e
Confidence 6
No 56
>PRK08493 NADH dehydrogenase subunit G; Validated
Probab=97.62 E-value=7.9e-05 Score=97.48 Aligned_cols=96 Identities=19% Similarity=0.291 Sum_probs=76.5
Q ss_pred EEEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCc----CCCC-CCCCCeeEEEECCccCCCCcccccccccchhhHHh
Q psy7003 22 VRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTK----YMCR-EGGCGVCTVTVTSSHPVTGVDSTYSVNACLVLVHM 96 (1520)
Q Consensus 22 ~~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k----~~c~-~g~cGactv~~~~~~~~~~~~~~~~v~scl~~~~~ 96 (1520)
|+|+|||+++++ ++++|+++.+|. .|+.-+. .+|. .|.|+.|.|.|+|. .+.||.+++.
T Consensus 2 v~i~IdG~~v~~----~~G~til~aa~~-~gi~iP~lC~~~~~~~~G~Cr~C~VeV~G~----------~~~AC~t~v~- 65 (819)
T PRK08493 2 ITITINGKECEA----QEGEYILNVARR-NGIFIPAICYLSGCSPTLACRLCMVEADGK----------RVYSCNTKAK- 65 (819)
T ss_pred eEEEECCEEEEe----CCCCHHHHHHHH-cCCccccccccCCCCCCccccceEEEECCE----------EeccccCCCC-
Confidence 789999998764 699999999997 4766543 3666 49999999999995 5889999994
Q ss_pred cCCcEEEEecCCCCCCCCCCHHHHHHHHhCCCCCCCCchh
Q psy7003 97 CGGWAITTVEGLGSKKKGYHNVQTRLATMNGSQCGYCSPG 136 (1520)
Q Consensus 97 ~~g~~i~T~eg~~~~~~~~h~vq~~~~~~~~~qcg~ctpg 136 (1520)
+|..|.|-..-- .+.-+.+++.+...|--+|+.|..+
T Consensus 66 -dGM~V~T~s~~v--~~~Rk~vle~ll~~HpldC~~Cd~~ 102 (819)
T PRK08493 66 -EGMNILTNTPNL--MDERNAIMQTYDVNHPLECGVCDKS 102 (819)
T ss_pred -CCCEEEecCHHH--HHHHHHHHHHHHhccCCCCCcCCCC
Confidence 999999952211 1234678889999999999999865
No 57
>PRK12814 putative NADPH-dependent glutamate synthase small subunit; Provisional
Probab=97.51 E-value=0.00016 Score=93.49 Aligned_cols=93 Identities=27% Similarity=0.473 Sum_probs=67.1
Q ss_pred eEEEEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCC------CCCCCCeeEEEECCccCCCCcccccccccchhh
Q psy7003 20 STVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMC------REGGCGVCTVTVTSSHPVTGVDSTYSVNACLVL 93 (1520)
Q Consensus 20 ~~~~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c------~~g~cGactv~~~~~~~~~~~~~~~~v~scl~~ 93 (1520)
+.|+|+|||+++++ ++++||+++++.. |+.-.. .| ..|.|+.|.|.|+|.. ..+.||+++
T Consensus 2 ~~v~~~idg~~~~~----~~g~ti~~a~~~~-g~~ip~-~c~~~~~~~~g~C~~C~V~v~g~~--------~~~~aC~t~ 67 (652)
T PRK12814 2 NTISLTINGRSVTA----APGTSILEAAASA-GITIPT-LCFHQELEATGSCWMCIVEIKGKN--------RFVPACSTA 67 (652)
T ss_pred CeEEEEECCEEEEe----CCcCcHHHHHHHc-CCcccc-ccCCCCCCCccccceeEEEECCCc--------ceecCcCCC
Confidence 35899999998764 6999999999874 655332 44 4799999999999851 258999999
Q ss_pred HHhcCCcEEEEecCCCCCCCCCCHHHHHHHHhCCCC-CCCCc
Q psy7003 94 VHMCGGWAITTVEGLGSKKKGYHNVQTRLATMNGSQ-CGYCS 134 (1520)
Q Consensus 94 ~~~~~g~~i~T~eg~~~~~~~~h~vq~~~~~~~~~q-cg~ct 134 (1520)
+. +|..|.| . + ..+...|+...+.-.++ |+.|.
T Consensus 68 ~~--~Gm~v~t----~-~-~~~~~~r~~~le~l~~~~c~~C~ 101 (652)
T PRK12814 68 VS--EGMVIET----E-N-AELHAMRRQSLERLIEQHCGDCL 101 (652)
T ss_pred CC--CCCEEEe----C-c-HHHHHHHHHHHHHHHhhcccccC
Confidence 84 8999999 1 2 24555664433333333 77776
No 58
>COG0479 FrdB Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit [Energy production and conversion]
Probab=97.49 E-value=0.00013 Score=82.41 Aligned_cols=69 Identities=23% Similarity=0.409 Sum_probs=58.1
Q ss_pred EEEEEcccCCCCCchHHHHH----hhcCCCCCcCCCCCCCCCeeEEEECCccCCCCcccccccccchhhHHhcCCcEEEE
Q psy7003 29 VVYIIGAEVPPGTRLVDFIR----DYARLKGTKYMCREGGCGVCTVTVTSSHPVTGVDSTYSVNACLVLVHMCGGWAITT 104 (1520)
Q Consensus 29 ~~~~~~~~~~~~~~l~~~lr----~~~~l~g~k~~c~~g~cGactv~~~~~~~~~~~~~~~~v~scl~~~~~~~g~~i~T 104 (1520)
+.|++ +.++++++||.|. +.-.--..+..|++|.||+|.|.|||. +..||.+++..+... +.|
T Consensus 20 ~~yev--~~~~~~~vLdaL~~Ik~e~d~~Lsfr~sCR~gICGSCam~ING~----------prLAC~t~~~~~~~~-~i~ 86 (234)
T COG0479 20 QTYEV--PYDEGMTVLDALLYIKEEQDPTLSFRRSCREGICGSCAMNINGK----------PRLACKTLMKDLEEG-VIT 86 (234)
T ss_pred EEEEe--cCCCCCcHHHHHHHHHHhcCCccchhhhccCCcCCcceeEECCc----------cccchhchhhhccCC-ceE
Confidence 35677 6779999999884 333455678999999999999999997 889999999998877 789
Q ss_pred ecCCCC
Q psy7003 105 VEGLGS 110 (1520)
Q Consensus 105 ~eg~~~ 110 (1520)
||-|++
T Consensus 87 iePL~~ 92 (234)
T COG0479 87 IEPLPN 92 (234)
T ss_pred EEECCC
Confidence 999985
No 59
>PF00111 Fer2: 2Fe-2S iron-sulfur cluster binding domain; InterPro: IPR001041 The ferredoxin protein family are electron carrier proteins with an iron-sulphur cofactor that act in a wide variety of metabolic reactions. Ferredoxins can be divided into several subgroups depending upon the physiological nature of the iron-sulphur cluster(s) and according to sequence similarities. This entry represents members of the 2Fe-2S ferredoxin family that have a general core structure consisting of beta(2)-alpha-beta(2), which includes putidaredoxin and terpredoxin, and adrenodoxin [, , , ]. They are proteins of around one hundred amino acids with four conserved cysteine residues to which the 2Fe-2S cluster is ligated. This conserved region is also found as a domain in various metabolic enzymes and in multidomain proteins, such as aldehyde oxidoreductase (N-terminal), xanthine oxidase (N-terminal), phthalate dioxygenase reductase (C-terminal), succinate dehydrogenase iron-sulphur protein (N-terminal), and methane monooxygenase reductase (N-terminal).; GO: 0009055 electron carrier activity, 0051536 iron-sulfur cluster binding; PDB: 3M9S_C 2FUG_L 3IAS_L 2YBB_3 3IAM_3 3I9V_3 1JQ4_A 1DOX_A 1DOY_A 2KAJ_A ....
Probab=97.48 E-value=0.00012 Score=68.74 Aligned_cols=48 Identities=46% Similarity=0.822 Sum_probs=42.2
Q ss_pred EEECCEEEEEcccCCCCCc-hHHHHHhhcCCCCCcCCCCCCCCCeeEEEECC
Q psy7003 24 FTINGVVYIIGAEVPPGTR-LVDFIRDYARLKGTKYMCREGGCGVCTVTVTS 74 (1520)
Q Consensus 24 ~~ing~~~~~~~~~~~~~~-l~~~lr~~~~l~g~k~~c~~g~cGactv~~~~ 74 (1520)
+++||+.+++ +++++.+ |++++++ .+-.+..++|+.|+||.|.|.|.+
T Consensus 1 i~i~g~~~~~--~~~~~~~~ll~~~~~-~~gi~i~~~C~~g~Cg~C~v~v~~ 49 (78)
T PF00111_consen 1 ITINGKGVTV--EVPPGETLLLDALER-AGGIGIPYSCGGGGCGTCRVRVLE 49 (78)
T ss_dssp EETTTEEEEE--EEETTSBBHHHHHHH-TTTTTSTTSSSSSSSSTTEEEEEE
T ss_pred CEECCeEEEE--EeCCCccHHHHHHHH-cCCCCcccCCCCCccCCcEEEEee
Confidence 4789999998 6889999 9999997 446789999999999999998764
No 60
>PRK12577 succinate dehydrogenase iron-sulfur subunit; Provisional
Probab=97.46 E-value=0.00067 Score=80.93 Aligned_cols=70 Identities=27% Similarity=0.484 Sum_probs=54.2
Q ss_pred EEEEEcccCCCCCchHHHHHhh-cCCCC---CcCCCCCCCCCeeEEEECCccCCCCcccccccccchhhHHh-cC-----
Q psy7003 29 VVYIIGAEVPPGTRLVDFIRDY-ARLKG---TKYMCREGGCGVCTVTVTSSHPVTGVDSTYSVNACLVLVHM-CG----- 98 (1520)
Q Consensus 29 ~~~~~~~~~~~~~~l~~~lr~~-~~l~g---~k~~c~~g~cGactv~~~~~~~~~~~~~~~~v~scl~~~~~-~~----- 98 (1520)
+.|++ ++++++|+||.|+.- ..+.+ ...+|+.|.||+|.|.|||. ++.||.+++.. ++
T Consensus 19 ~~~~v--~~~~~~tvL~~l~~i~~~~d~tL~~~~~c~~~~Cg~C~v~inG~----------~~laC~t~v~~~~~~~~~~ 86 (329)
T PRK12577 19 QTYTL--EVEPGNTILDCLNRIKWEQDGSLAFRKNCRNTICGSCAMRINGR----------SALACKENVGSELARLSDS 86 (329)
T ss_pred EEEEE--ECCCCChHHHHHHHhCCcCCCCcEEcCCCCCCCCCCCEEEECCe----------eecCcccchhhhhcccccc
Confidence 45677 688999999999753 22333 56789999999999999996 77899999875 31
Q ss_pred ---CcEEEEecCCCC
Q psy7003 99 ---GWAITTVEGLGS 110 (1520)
Q Consensus 99 ---g~~i~T~eg~~~ 110 (1520)
+....|||-|++
T Consensus 87 ~~~~~~~i~iePl~~ 101 (329)
T PRK12577 87 NSGAIPEITIAPLGN 101 (329)
T ss_pred ccCCCCeEEEEECCC
Confidence 124568999987
No 61
>PRK13552 frdB fumarate reductase iron-sulfur subunit; Provisional
Probab=97.38 E-value=0.00022 Score=81.47 Aligned_cols=69 Identities=25% Similarity=0.414 Sum_probs=55.9
Q ss_pred EEEEEcccCCCCCchHHHHHh---h-cCCCCCcCCCCCCCCCeeEEEECCccCCCCcccccccccchhhHHhcCCcEEEE
Q psy7003 29 VVYIIGAEVPPGTRLVDFIRD---Y-ARLKGTKYMCREGGCGVCTVTVTSSHPVTGVDSTYSVNACLVLVHMCGGWAITT 104 (1520)
Q Consensus 29 ~~~~~~~~~~~~~~l~~~lr~---~-~~l~g~k~~c~~g~cGactv~~~~~~~~~~~~~~~~v~scl~~~~~~~g~~i~T 104 (1520)
+.|++ ++++++|+||.|.. + -+--..+++|++|.||+|.|.|||. ++.+|.+.+-.+.+. ..|
T Consensus 24 ~~y~v--~~~~~~tvLdaL~~Ik~~~D~sL~fr~sCr~giCGsCam~ING~----------~~LAC~t~v~~~~~~-~i~ 90 (239)
T PRK13552 24 VTYQL--EETPGMTLFIALNRIREEQDPSLQFDFVCRAGICGSCAMVINGR----------PTLACRTLTSDYPDG-VIT 90 (239)
T ss_pred EEEEe--cCCCCCCHHHHHHHHHhcCCCCeeEeccCCCCCCCCceeEECCe----------EhhhhhccHhhcCCC-cEE
Confidence 55778 68899999999963 2 2224568999999999999999996 899999999887533 468
Q ss_pred ecCCCC
Q psy7003 105 VEGLGS 110 (1520)
Q Consensus 105 ~eg~~~ 110 (1520)
||-|.+
T Consensus 91 iePl~~ 96 (239)
T PRK13552 91 LMPLPV 96 (239)
T ss_pred EEECCC
Confidence 999974
No 62
>PRK07569 bidirectional hydrogenase complex protein HoxU; Validated
Probab=97.37 E-value=0.00048 Score=78.38 Aligned_cols=95 Identities=21% Similarity=0.399 Sum_probs=71.1
Q ss_pred eEEEEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCC------CCCCCeeEEEECCccCCCCcccccccccchhh
Q psy7003 20 STVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCR------EGGCGVCTVTVTSSHPVTGVDSTYSVNACLVL 93 (1520)
Q Consensus 20 ~~~~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~------~g~cGactv~~~~~~~~~~~~~~~~v~scl~~ 93 (1520)
+.|+|+|||+.+. ++++.|||+.++.. |+. ....|. .|.||.|.|.|+|.. ..+.||.++
T Consensus 2 ~~v~i~idg~~~~----~~~g~til~a~~~~-gi~-ip~~C~~~~~~~~G~C~~C~V~v~g~~--------~~~~aC~t~ 67 (234)
T PRK07569 2 SVKTLTIDDQLVS----AREGETLLEAAREA-GIP-IPTLCHLDGLSDVGACRLCLVEIEGSN--------KLLPACVTP 67 (234)
T ss_pred ceEEEEECCEEEE----eCCCCHHHHHHHHc-CCC-CCcCcCCCCCCCCCccCCcEEEECCCC--------ccccCcCCC
Confidence 4589999999865 56999999999863 433 233354 999999999999841 346799999
Q ss_pred HHhcCCcEEEEecCCCCCCCCC----CHHHHHHHHhCCCCCCCCchh
Q psy7003 94 VHMCGGWAITTVEGLGSKKKGY----HNVQTRLATMNGSQCGYCSPG 136 (1520)
Q Consensus 94 ~~~~~g~~i~T~eg~~~~~~~~----h~vq~~~~~~~~~qcg~ctpg 136 (1520)
+. +|..|.|-- +.+ ..+-+.|...|-.-|..|..+
T Consensus 68 v~--~Gm~v~t~~------~~~~~~rk~~l~~ll~~h~~~C~~C~~~ 106 (234)
T PRK07569 68 VA--EGMVVQTNT------PRLQEYRRMIVELLFAEGNHVCAVCVAN 106 (234)
T ss_pred CC--CCCEEEECC------HHHHHHHHHHHHHHHHhccccCcccCCC
Confidence 86 799999841 122 235666778888899999864
No 63
>PRK08640 sdhB succinate dehydrogenase iron-sulfur subunit; Reviewed
Probab=97.34 E-value=0.00027 Score=81.16 Aligned_cols=68 Identities=16% Similarity=0.311 Sum_probs=54.3
Q ss_pred EEEEEcccCCCCCchHHHHH---hh-cCC-------CCCcCCCCCCCCCeeEEEECCccCCCCcccccccccchhhHHhc
Q psy7003 29 VVYIIGAEVPPGTRLVDFIR---DY-ARL-------KGTKYMCREGGCGVCTVTVTSSHPVTGVDSTYSVNACLVLVHMC 97 (1520)
Q Consensus 29 ~~~~~~~~~~~~~~l~~~lr---~~-~~l-------~g~k~~c~~g~cGactv~~~~~~~~~~~~~~~~v~scl~~~~~~ 97 (1520)
+.|++ ++++++|+||.|. ++ +.+ -..+++|++|.||+|.|.|||. +..||.+.+-.+
T Consensus 23 q~y~v--~~~~~~tvLdaL~~I~~~~~~~~g~~~~~l~fr~sCr~giCGsCam~ING~----------p~LAC~t~v~~~ 90 (249)
T PRK08640 23 EEFEI--PYRPNMNVISALMEIRRNPVNAKGEKTTPVVWDMNCLEEVCGACSMVINGK----------PRQACTALIDQL 90 (249)
T ss_pred EEEEe--cCCCCCcHHHHHHHHHhcccccccccCCCeeEecccCCCCCCcCeeEECCc----------cchhhhChHHHc
Confidence 55777 6889999999986 22 112 3457899999999999999997 899999999887
Q ss_pred CCcEEEEecCCCC
Q psy7003 98 GGWAITTVEGLGS 110 (1520)
Q Consensus 98 ~g~~i~T~eg~~~ 110 (1520)
. . ..|||-|.+
T Consensus 91 ~-~-~i~iePl~~ 101 (249)
T PRK08640 91 E-Q-PIRLEPMST 101 (249)
T ss_pred C-C-cEEEEECCC
Confidence 3 3 368999974
No 64
>PRK07570 succinate dehydrogenase/fumarate reductase iron-sulfur subunit; Validated
Probab=97.34 E-value=0.00024 Score=81.52 Aligned_cols=80 Identities=18% Similarity=0.361 Sum_probs=59.6
Q ss_pred EEEEEccc-CCCCCchHHHHHh---hc-----CCCCCcCCCCCCCCCeeEEEECCccCCCCcccccc------cccchhh
Q psy7003 29 VVYIIGAE-VPPGTRLVDFIRD---YA-----RLKGTKYMCREGGCGVCTVTVTSSHPVTGVDSTYS------VNACLVL 93 (1520)
Q Consensus 29 ~~~~~~~~-~~~~~~l~~~lr~---~~-----~l~g~k~~c~~g~cGactv~~~~~~~~~~~~~~~~------v~scl~~ 93 (1520)
+.|++ + +++++|+||.|.. ++ .=-..+++|++|.||+|.|.|||. + ..||.+.
T Consensus 20 q~y~v--~~~~~~~tvLd~L~~Ik~~~~~~~~~~l~fr~sCr~~iCGsCam~ING~----------p~~~~~~~LAC~t~ 87 (250)
T PRK07570 20 ETYEV--DDISPDMSFLEMLDVLNEQLIEKGEEPVAFDHDCREGICGMCGLVINGR----------PHGPDRGTTTCQLH 87 (250)
T ss_pred EEEEe--cCCCCCCcHHHHHHHHHHHhhccCCCCeeEeccccCCcCCcceeEECCc----------cCCCCcccchhhhh
Confidence 56777 5 7899999999952 21 125789999999999999999996 6 7899999
Q ss_pred HHhcCCcEEEEecCCCCCCCCCCHHHHHHH
Q psy7003 94 VHMCGGWAITTVEGLGSKKKGYHNVQTRLA 123 (1520)
Q Consensus 94 ~~~~~g~~i~T~eg~~~~~~~~h~vq~~~~ 123 (1520)
+..+.+....|||-|.. +-.||.+-|+
T Consensus 88 ~~~~~~~~~i~iePl~~---~~fpvikDLv 114 (250)
T PRK07570 88 MRSFKDGDTITIEPWRA---AAFPVIKDLV 114 (250)
T ss_pred hhhcCCCCeEEEEECCC---CCCCeeeece
Confidence 88876444578999951 1235555544
No 65
>PRK12575 succinate dehydrogenase iron-sulfur subunit; Provisional
Probab=97.14 E-value=0.0006 Score=77.68 Aligned_cols=68 Identities=21% Similarity=0.294 Sum_probs=52.7
Q ss_pred EEEEEcccCCC-CCchHHHHHhh---cCCCCCcCCCCCCCCCeeEEEECCccCCCCcccccccccchhhHHhcCCcEEEE
Q psy7003 29 VVYIIGAEVPP-GTRLVDFIRDY---ARLKGTKYMCREGGCGVCTVTVTSSHPVTGVDSTYSVNACLVLVHMCGGWAITT 104 (1520)
Q Consensus 29 ~~~~~~~~~~~-~~~l~~~lr~~---~~l~g~k~~c~~g~cGactv~~~~~~~~~~~~~~~~v~scl~~~~~~~g~~i~T 104 (1520)
+.|++ ++++ ++|+||.|..- -+--..+++|++|.||+|.|+|||. ++.+|.+.+-.+.+ . .|
T Consensus 23 ~~y~v--~~~~~~~tvld~L~~ik~~d~~l~fr~sCr~giCGsCa~~iNG~----------~~LaC~t~~~~~~~-~-i~ 88 (235)
T PRK12575 23 QRYEI--APRAEDRMLLDVLGRVKAQDETLSYRRSCREGICGSDAMNINGR----------NGLACLTNMQALPR-E-IV 88 (235)
T ss_pred EEEEe--cCCCCCCcHHHHHHHHHhcCCCeeeeccCCCCCCCCCeeEECCe----------EcchhhCcHhHcCC-C-EE
Confidence 45666 4555 67999988642 2233467999999999999999996 89999999998853 2 58
Q ss_pred ecCCCC
Q psy7003 105 VEGLGS 110 (1520)
Q Consensus 105 ~eg~~~ 110 (1520)
||-|.+
T Consensus 89 iePl~~ 94 (235)
T PRK12575 89 LRPLPG 94 (235)
T ss_pred EeECCC
Confidence 999964
No 66
>PLN00129 succinate dehydrogenase [ubiquinone] iron-sulfur subunit
Probab=97.09 E-value=0.00064 Score=78.90 Aligned_cols=68 Identities=24% Similarity=0.412 Sum_probs=52.3
Q ss_pred EEEEcccCCC-CCchHHHHHh---h-cCCCCCcCCCCCCCCCeeEEEECCccCCCCcccccccccchhhHHhcCCcEEEE
Q psy7003 30 VYIIGAEVPP-GTRLVDFIRD---Y-ARLKGTKYMCREGGCGVCTVTVTSSHPVTGVDSTYSVNACLVLVHMCGGWAITT 104 (1520)
Q Consensus 30 ~~~~~~~~~~-~~~l~~~lr~---~-~~l~g~k~~c~~g~cGactv~~~~~~~~~~~~~~~~v~scl~~~~~~~g~~i~T 104 (1520)
.|++ ++.+ ++|+||.|+. + -+--..+++|++|.||+|.|.|||. ++.+|.+.+-...+. .+|
T Consensus 63 ~y~v--~~~~~~~tVLd~L~~Ik~~~D~sLsfr~sCr~giCGsCam~ING~----------p~LAC~t~v~~~~~~-~i~ 129 (276)
T PLN00129 63 SYKV--DLNDCGPMVLDVLIKIKNEQDPSLTFRRSCREGICGSCAMNIDGK----------NTLACLTKIDRDESG-PTT 129 (276)
T ss_pred EEEe--CCCCCCchHHHHHHHHHHcCCCCeEEeccCCCCCCCCCeeEECCc----------ccccccccHhhcCCC-cEE
Confidence 4556 4554 7999999864 2 1223568999999999999999996 899999999877533 356
Q ss_pred ecCCCC
Q psy7003 105 VEGLGS 110 (1520)
Q Consensus 105 ~eg~~~ 110 (1520)
||-|.+
T Consensus 130 iePl~~ 135 (276)
T PLN00129 130 ITPLPH 135 (276)
T ss_pred EEECCC
Confidence 999974
No 67
>PRK06259 succinate dehydrogenase/fumarate reductase iron-sulfur subunit; Provisional
Probab=97.04 E-value=0.0011 Score=82.86 Aligned_cols=64 Identities=28% Similarity=0.537 Sum_probs=50.6
Q ss_pred EEEEEcccCCCCCchHHHHHhhcCCCC----CcCCCCCCCCCeeEEEECCccCCCCcccccccccchhhHHhcCCcEEEE
Q psy7003 29 VVYIIGAEVPPGTRLVDFIRDYARLKG----TKYMCREGGCGVCTVTVTSSHPVTGVDSTYSVNACLVLVHMCGGWAITT 104 (1520)
Q Consensus 29 ~~~~~~~~~~~~~~l~~~lr~~~~l~g----~k~~c~~g~cGactv~~~~~~~~~~~~~~~~v~scl~~~~~~~g~~i~T 104 (1520)
+.+++ ++++++||||+|++....+. .+.+|+.|.||+|+|.|+|. .+.+|.+++. +|..|.+
T Consensus 21 ~~~~v--~~~~~~tvl~al~~~~~~~~~~l~~~~~C~~g~Cg~C~v~v~G~----------~~laC~~~~~--~~~~i~~ 86 (486)
T PRK06259 21 ESYEV--PVKEGMTVLDALEYINKTYDANIAFRSSCRAGQCGSCAVTINGE----------PVLACKTEVE--DGMIIEP 86 (486)
T ss_pred EEEEE--eCCCCChHHHHHHHhchhcCCCceecCCCCCCCCCCCEEEECCe----------EecccccCCC--CCCEEEe
Confidence 35556 68899999999996433222 37899999999999999995 6789999885 5788877
Q ss_pred ec
Q psy7003 105 VE 106 (1520)
Q Consensus 105 ~e 106 (1520)
..
T Consensus 87 ~~ 88 (486)
T PRK06259 87 LD 88 (486)
T ss_pred cC
Confidence 75
No 68
>PRK10713 2Fe-2S ferredoxin YfaE; Provisional
Probab=96.28 E-value=0.0076 Score=58.16 Aligned_cols=48 Identities=25% Similarity=0.553 Sum_probs=38.6
Q ss_pred EEEEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEEC
Q psy7003 21 TVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVT 73 (1520)
Q Consensus 21 ~~~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~~ 73 (1520)
+|+|.-+|..+.+ .+++.+|||.+++. |+ ...++|+.|.||+|.+.+-
T Consensus 3 ~v~~~~~~~~~~~---~~~~~tlL~a~~~~-gi-~~p~~Cr~G~Cg~C~~~~~ 50 (84)
T PRK10713 3 RVTLRITGTQLLC---QDEHPSLLAALESH-NV-AVEYQCREGYCGSCRTRLV 50 (84)
T ss_pred EEEEEeCCcEEEe---cCCCCcHHHHHHHc-CC-CCCCCCCCeECCCCEeEEE
Confidence 5778888877654 22469999999875 76 7899999999999999873
No 69
>PRK07860 NADH dehydrogenase subunit G; Validated
Probab=96.16 E-value=0.0069 Score=80.33 Aligned_cols=99 Identities=26% Similarity=0.391 Sum_probs=74.6
Q ss_pred EEEEEECCEEEEEcccCCCCCchHHHHHhh----cCCCCCcCCCCCCCCCeeEEEECCccCCCCcccccccccchhhHHh
Q psy7003 21 TVRFTINGVVYIIGAEVPPGTRLVDFIRDY----ARLKGTKYMCREGGCGVCTVTVTSSHPVTGVDSTYSVNACLVLVHM 96 (1520)
Q Consensus 21 ~~~~~ing~~~~~~~~~~~~~~l~~~lr~~----~~l~g~k~~c~~g~cGactv~~~~~~~~~~~~~~~~v~scl~~~~~ 96 (1520)
.|+|+|||+.++ +++++||++..+.. -.|...+..+.-|.|.-|.|.|+|.. ..+.||.+++.
T Consensus 4 ~v~~~idg~~~~----~~~g~til~aa~~~gi~ip~~C~~~~l~~~g~Cr~C~Vev~g~~--------~~~~aC~t~v~- 70 (797)
T PRK07860 4 LVTLTIDGVEVS----VPKGTLVIRAAELLGIQIPRFCDHPLLDPVGACRQCLVEVEGQR--------KPQASCTTTVT- 70 (797)
T ss_pred eEEEEECCEEEE----eCCCChHHHHHHHcCCCCCeecCCCCCCCCcccCccEEEECCCc--------ccccccCCCCC-
Confidence 489999999876 46999999999753 23555555667899999999999851 35889999986
Q ss_pred cCCcEEEEe---cCCCCCCCCCCHHHHHHHHhCCCCCCCCchh
Q psy7003 97 CGGWAITTV---EGLGSKKKGYHNVQTRLATMNGSQCGYCSPG 136 (1520)
Q Consensus 97 ~~g~~i~T~---eg~~~~~~~~h~vq~~~~~~~~~qcg~ctpg 136 (1520)
+|..|.|- |=+- +.=..+-+.+...|--.|..|.-|
T Consensus 71 -~gm~V~t~~~s~~v~---~~r~~~le~ll~~hp~dC~~C~~~ 109 (797)
T PRK07860 71 -DGMVVKTQLTSPVAD---KAQHGVMELLLINHPLDCPVCDKG 109 (797)
T ss_pred -CCcEEEeCCCCHHHH---HHHHHHHHHHHhcCCCCCCCCCCC
Confidence 79999983 2221 112346677888899999999865
No 70
>CHL00134 petF ferredoxin; Validated
Probab=96.09 E-value=0.01 Score=59.02 Aligned_cols=44 Identities=27% Similarity=0.622 Sum_probs=38.1
Q ss_pred CCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEECC
Q psy7003 27 NGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTS 74 (1520)
Q Consensus 27 ng~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~~~ 74 (1520)
+|..+.+ +++++.+||+.+++. |+ ...++|+.|.||.|.|-|-.
T Consensus 13 ~~~~~~~--~~~~~~tLL~a~~~~-Gi-~i~~~C~~G~Cg~C~v~v~~ 56 (99)
T CHL00134 13 EGIDVTI--DCPDDVYILDAAEEQ-GI-DLPYSCRAGACSTCAGKVTE 56 (99)
T ss_pred CCCeEEE--EECCCCcHHHHHHHc-CC-CCCcCCCCccCCCCEEEEEe
Confidence 7887777 689999999999875 76 78899999999999998843
No 71
>PTZ00490 Ferredoxin superfamily; Provisional
Probab=96.05 E-value=0.0093 Score=63.16 Aligned_cols=86 Identities=21% Similarity=0.277 Sum_probs=59.4
Q ss_pred ceEEEEEEC---CEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCC-CCCCCeeEEEECCc-----cCC---------CC
Q psy7003 19 SSTVRFTIN---GVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCR-EGGCGVCTVTVTSS-----HPV---------TG 80 (1520)
Q Consensus 19 ~~~~~~~in---g~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~-~g~cGactv~~~~~-----~~~---------~~ 80 (1520)
+-++++++| |+++++ +++++++|++.|++. +.-+.-.-|+ .|.||-|.|.|... .+. ..
T Consensus 33 ~g~v~I~~~~~dG~~~~v--~~~~G~sLLeal~~~-~~i~i~~~CGG~g~CgtC~V~V~~g~~~~l~~~~~~E~~~L~~~ 109 (143)
T PTZ00490 33 PGKVKVCVKKRDGTHCDV--EVPVGMSLMHALRDV-AKLDVEGTCNGCMQCATCHVYLSAASFKKLGGPSEEEEDVLAKA 109 (143)
T ss_pred CCcEEEEEEcCCCCEEEE--EECCCccHHHHHHHc-CCCCccccCCCCCEeCCCEEEECCCccccCCCCChHHHHHhhcc
Confidence 335666654 688888 799999999999985 3345566788 79999999999652 110 01
Q ss_pred -cccccccccchhhHHh-cCCcEEEEecC
Q psy7003 81 -VDSTYSVNACLVLVHM-CGGWAITTVEG 107 (1520)
Q Consensus 81 -~~~~~~v~scl~~~~~-~~g~~i~T~eg 107 (1520)
.....+..||.+.+.. ++|..|..-|-
T Consensus 110 ~~~~~gsRLaCQi~v~~~ldgl~V~vp~~ 138 (143)
T PTZ00490 110 LDVKETSRLACQVDLTPEMDGLEVELPSY 138 (143)
T ss_pred ccCCCCcEEeeeEEEecCCCCEEEEeCcc
Confidence 2233356899988865 67877775543
No 72
>PTZ00305 NADH:ubiquinone oxidoreductase; Provisional
Probab=95.82 E-value=0.023 Score=66.21 Aligned_cols=98 Identities=17% Similarity=0.329 Sum_probs=68.3
Q ss_pred CceEEEEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcC----CC-CCCCCCeeEEEECCccCCCCcccccccccchh
Q psy7003 18 TSSTVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKY----MC-REGGCGVCTVTVTSSHPVTGVDSTYSVNACLV 92 (1520)
Q Consensus 18 ~~~~~~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~----~c-~~g~cGactv~~~~~~~~~~~~~~~~v~scl~ 92 (1520)
.+-.+.++|||+++++ +++++|||+..|+. |+.=..+ +. ..|.|+.|.|.|+|.. ..+.||.+
T Consensus 65 ~~~~~~I~IDGk~VeV---~~~G~TILeAAr~~-GI~IPtLCy~~~L~p~G~CRlClVEVeG~~--------~lv~AC~t 132 (297)
T PTZ00305 65 HKPRAIMFVNKRPVEI---IPQEENLLEVLERE-GIRVPKFCYHPILSVAGNCRMCLVQVDGTQ--------NLVVSCAT 132 (297)
T ss_pred cCCceEEEECCEEEEe---cCCCChHHHHHHHc-CCCcCccccCCCCCCCCccceeEEEECCCc--------CcccccCC
Confidence 3456889999998875 37899999999874 5442222 22 3689999999998851 47899999
Q ss_pred hHHhcCCcEEEEecCCCCCCCCCC----HHHHHHHHhCCCCCCCCch
Q psy7003 93 LVHMCGGWAITTVEGLGSKKKGYH----NVQTRLATMNGSQCGYCSP 135 (1520)
Q Consensus 93 ~~~~~~g~~i~T~eg~~~~~~~~h----~vq~~~~~~~~~qcg~ctp 135 (1520)
++. +|..|.|- +. ... .+-+.|...|-.-|..|..
T Consensus 133 pV~--eGM~V~T~-----Se-~v~~~Rk~vLElLLs~Hp~DC~~C~k 171 (297)
T PTZ00305 133 VAL--PGMSIITD-----SR-LVRDAREGNVELILINHPNDCPICEQ 171 (297)
T ss_pred cCC--CCCEEEeC-----CH-HHHHHHHHHHHHHHhcCCCcCCcccC
Confidence 986 79999982 21 222 2444555566666766654
No 73
>TIGR02008 fdx_plant ferredoxin [2Fe-2S]. This model represents single domain 2Fe-2S (also called plant type) ferredoxins. In general, these occur as a single domain proteins or with a chloroplast transit peptide. Species tend to be photosynthetic, but several forms may occur in one species and individually may not be associated with photocynthesis. Halobacterial forms differ somewhat in architecture; they score between trusted and noise cutoffs. Sequences scoring below the noise cutoff tend to be ferredoxin-related domains of larger proteins.
Probab=95.79 E-value=0.016 Score=57.38 Aligned_cols=48 Identities=27% Similarity=0.536 Sum_probs=38.0
Q ss_pred EEE-EECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEEC
Q psy7003 22 VRF-TINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVT 73 (1520)
Q Consensus 22 ~~~-~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~~ 73 (1520)
|+| +-+|+...+ .++++.+|||.+++. |+ ...++|+.|.||.|.|-|-
T Consensus 5 v~~~~~~~~~~~~--~~~~g~tLLda~~~~-Gi-~i~~~C~~G~Cg~C~v~v~ 53 (97)
T TIGR02008 5 VTLVNPDGGEETI--ECPDDQYILDAAEEA-GI-DLPYSCRAGACSTCAGKVE 53 (97)
T ss_pred EEEEECCCCEEEE--EECCCCcHHHHHHHc-CC-CCCcCCCCccCCCCceEEE
Confidence 444 237755666 578999999999874 76 4789999999999999883
No 74
>PRK09129 NADH dehydrogenase subunit G; Validated
Probab=95.24 E-value=0.026 Score=74.79 Aligned_cols=100 Identities=21% Similarity=0.337 Sum_probs=72.6
Q ss_pred EEEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCC------CCCCCeeEEEECCccCCCCcccccccccchhhHH
Q psy7003 22 VRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCR------EGGCGVCTVTVTSSHPVTGVDSTYSVNACLVLVH 95 (1520)
Q Consensus 22 ~~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~------~g~cGactv~~~~~~~~~~~~~~~~v~scl~~~~ 95 (1520)
|+|+|||+++++ ++++||++.++.. |..-. .-|. .|.|..|.|.|+|.. ..+.||.+++.
T Consensus 2 ~~~~idg~~~~~----~~g~~il~a~~~~-g~~ip-~~c~~~~~~~~~~C~~C~v~v~~~~--------~~~~aC~~~~~ 67 (776)
T PRK09129 2 VEIEIDGKKVEV----PEGSMVIEAADKA-GIYIP-RFCYHKKLSIAANCRMCLVEVEKAP--------KPLPACATPVT 67 (776)
T ss_pred eEEEECCEEEEe----CCCCHHHHHHHHc-CCCCC-cccCCCCCCCCCCcceeEEEECCCC--------CcCcccCCCCC
Confidence 789999998865 6999999999863 44332 3455 589999999999851 25889999987
Q ss_pred hcCCcEEEEecCCCCCCCCCCHHHHHHHHhCCCCCCCCchhHHH
Q psy7003 96 MCGGWAITTVEGLGSKKKGYHNVQTRLATMNGSQCGYCSPGMVM 139 (1520)
Q Consensus 96 ~~~g~~i~T~eg~~~~~~~~h~vq~~~~~~~~~qcg~ctpg~vm 139 (1520)
+|..|.|-..- -++.=..+-+.|...|--.|..|..+-=+
T Consensus 68 --~gm~v~t~~~~--~~~~r~~~l~~ll~~h~~~C~~c~~~g~C 107 (776)
T PRK09129 68 --DGMKVFTRSEK--ALKAQKSVMEFLLINHPLDCPICDQGGEC 107 (776)
T ss_pred --CCCEEEcCCHH--HHHHHHHHHHHHHhcCCCCcccCCCCCCC
Confidence 79999983110 01112345567788899999999976533
No 75
>PLN03136 Ferredoxin; Provisional
Probab=95.11 E-value=0.034 Score=59.32 Aligned_cols=48 Identities=23% Similarity=0.445 Sum_probs=37.4
Q ss_pred EEEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEEC
Q psy7003 22 VRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVT 73 (1520)
Q Consensus 22 ~~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~~ 73 (1520)
|+|.-++..+++ +++++.+|||.+++. |+. ..++|+.|.||.|.+.|-
T Consensus 57 V~l~~~~~~~~~--~~~~g~tILdAa~~~-Gi~-lp~sCr~G~CGtC~~~l~ 104 (148)
T PLN03136 57 VKFITPEGEQEV--ECEEDVYVLDAAEEA-GID-LPYSCRAGSCSSCAGKVV 104 (148)
T ss_pred EEEecCCCcEEE--EeCCCCcHHHHHHHc-CCC-CCcCCCCccCCCCEEEEe
Confidence 444334444556 688999999999875 754 889999999999999883
No 76
>TIGR01973 NuoG NADH-quinone oxidoreductase, chain G. This model represents the G subunit (one of 14: A-N) of the NADH-quinone oxidoreductase complex I which generally couples NADH and ubiquinone oxidation/reduction in bacteria and mammalian mitochondria while translocating protons, but may act on NADPH and/or plastoquinone in cyanobacteria and plant chloroplasts. This model excludes related subunits from formate dehydrogenase complexes.
Probab=94.90 E-value=0.033 Score=71.80 Aligned_cols=92 Identities=25% Similarity=0.402 Sum_probs=70.4
Q ss_pred EEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCC------CCCCCeeEEEECCccCCCCcccccccccchhhHHhc
Q psy7003 24 FTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCR------EGGCGVCTVTVTSSHPVTGVDSTYSVNACLVLVHMC 97 (1520)
Q Consensus 24 ~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~------~g~cGactv~~~~~~~~~~~~~~~~v~scl~~~~~~ 97 (1520)
++|||+.+++ ++++||++.+++. |..-+ .-|. .|.|..|.|.|+|.. + ..+.||.+++.
T Consensus 1 ~~idg~~~~~----~~g~~il~a~~~~-gi~ip-~~C~~~~l~~~g~Cr~C~v~v~g~~----~---~~~~aC~~~~~-- 65 (603)
T TIGR01973 1 IFIDGKELEV----PKGTTVLQACLSA-GIEIP-RFCYHEKLSIAGNCRMCLVEVEKFP----D---KPVASCATPVT-- 65 (603)
T ss_pred CEECCEEEEe----CCCCHHHHHHHHc-CCCcc-ccCCCCCCCCCCccccCEEEECCCC----C---CcccccCCCCC--
Confidence 5899998764 6999999999874 65433 5675 899999999999851 0 26899999987
Q ss_pred CCcEEEEecCCCCCCCCC----CHHHHHHHHhCCCCCCCCchh
Q psy7003 98 GGWAITTVEGLGSKKKGY----HNVQTRLATMNGSQCGYCSPG 136 (1520)
Q Consensus 98 ~g~~i~T~eg~~~~~~~~----h~vq~~~~~~~~~qcg~ctpg 136 (1520)
+|..|.|- + ... .-+.+.|...|---|..|.-+
T Consensus 66 ~gm~v~t~----~--~~~~~~r~~~~e~ll~~h~~dC~~C~~~ 102 (603)
T TIGR01973 66 DGMKISTN----S--EKVKKAREGVMEFLLINHPLDCPICDQG 102 (603)
T ss_pred CCCEEEeC----C--HHHHHHHHHHHHHHHhcCCCCCCcCCCC
Confidence 79999982 1 122 345566777888889999875
No 77
>PRK11872 antC anthranilate dioxygenase reductase; Provisional
Probab=94.86 E-value=0.034 Score=66.71 Aligned_cols=48 Identities=23% Similarity=0.430 Sum_probs=40.6
Q ss_pred EEEEE---CCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEEC
Q psy7003 22 VRFTI---NGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVT 73 (1520)
Q Consensus 22 ~~~~i---ng~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~~ 73 (1520)
.+++| ||+.+.+ +++++.||||.+++. |+ ...++|++|.||.|.|.|-
T Consensus 3 ~~v~~~~~~~~~~~~--~~~~g~tlL~a~~~~-g~-~~p~~C~~G~Cg~C~~~~~ 53 (340)
T PRK11872 3 HKVALSFADGKTLFF--PVGKDELLLDAALRN-GI-NLPLDCREGVCGTCQGRCE 53 (340)
T ss_pred eEEEEEecCCcEEEE--EeCCCCcHHHHHHHc-CC-CCcCCCCCeECCCCEEEEE
Confidence 45666 9998877 688999999999875 75 6789999999999999873
No 78
>PRK09130 NADH dehydrogenase subunit G; Validated
Probab=94.37 E-value=0.068 Score=69.98 Aligned_cols=96 Identities=27% Similarity=0.452 Sum_probs=72.3
Q ss_pred EEEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCC------CCCCCeeEEEECCccCCCCcccccccccchhhHH
Q psy7003 22 VRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCR------EGGCGVCTVTVTSSHPVTGVDSTYSVNACLVLVH 95 (1520)
Q Consensus 22 ~~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~------~g~cGactv~~~~~~~~~~~~~~~~v~scl~~~~ 95 (1520)
++++|||+.++ |++++|+|+..|. .|.. ...-|- .|.|..|.|.|.|.. -+.+.||.+|+.
T Consensus 2 ~~~~Idg~~v~----v~~g~til~a~~~-~gi~-IP~lCy~~~l~~~g~Cr~ClVev~~~~-------~~~~~sC~~~v~ 68 (687)
T PRK09130 2 VKLKVDGKEIE----VPDGYTLLQACEA-AGAE-IPRFCYHERLSIAGNCRMCLVEVKGGP-------PKPVASCAMPVG 68 (687)
T ss_pred eEEEECCEEEE----eCCCCHHHHHHHH-cCCC-cCcccCCCCCCCCCCCCCCEEEECCCC-------CCcccccCCCCC
Confidence 78999999876 5699999999986 4665 334575 699999999998731 147999999986
Q ss_pred hcCCcEEEEecCCCCC--CCCCCHHHHHHHHhCCCCCCCCchh
Q psy7003 96 MCGGWAITTVEGLGSK--KKGYHNVQTRLATMNGSQCGYCSPG 136 (1520)
Q Consensus 96 ~~~g~~i~T~eg~~~~--~~~~h~vq~~~~~~~~~qcg~ctpg 136 (1520)
+|..|.|= +. ++.=.-+-+.|...|---|..|.-|
T Consensus 69 --~gm~v~T~----s~~v~~~r~~~le~ll~~Hp~dC~~C~~~ 105 (687)
T PRK09130 69 --EGMVIFTN----TPMVKKAREGVMEFLLINHPLDCPICDQG 105 (687)
T ss_pred --CCCEEEeC----CHHHHHHHHHHHHHHHhcCCCCCCCCCCC
Confidence 79999982 11 1112346667788888889999864
No 79
>PRK08166 NADH dehydrogenase subunit G; Validated
Probab=93.94 E-value=0.084 Score=70.84 Aligned_cols=102 Identities=22% Similarity=0.351 Sum_probs=72.5
Q ss_pred EEEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCC------CCCCCeeEEEECCccCCCCcccccccccchhhHH
Q psy7003 22 VRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCR------EGGCGVCTVTVTSSHPVTGVDSTYSVNACLVLVH 95 (1520)
Q Consensus 22 ~~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~------~g~cGactv~~~~~~~~~~~~~~~~v~scl~~~~ 95 (1520)
++|+|||+.++ +++++|||+.++.. |+. ....|. .|.|+.|.|.|.+- +..++ ...+.||.+++.
T Consensus 2 ~~i~idg~~~~----~~~g~til~a~~~~-gi~-ip~~C~~~~~~~~G~C~~C~v~v~~g-~~~~~--~~~~~aC~~~v~ 72 (847)
T PRK08166 2 ATIHVDGKEYE----VNGADNLLEACLSL-GID-IPYFCWHPALGSVGACRQCAVKQYQN-PEDTR--GRLVMSCMTPAT 72 (847)
T ss_pred eEEEECCEEEE----eCCCCHHHHHHHHc-CCC-CCccccCCCCCCCCccCCCeEEEeec-CccCC--CCcccCcCCCCC
Confidence 68999999865 46999999999864 543 346898 49999999999432 11111 136889999886
Q ss_pred hcCCcEEEEecCCCCCCCCCCHHHHHHHHhCCCCCCCCchh
Q psy7003 96 MCGGWAITTVEGLGSKKKGYHNVQTRLATMNGSQCGYCSPG 136 (1520)
Q Consensus 96 ~~~g~~i~T~eg~~~~~~~~h~vq~~~~~~~~~qcg~ctpg 136 (1520)
+|..|.|-.--- ++.-.-+.+.|...|--.|..|.-|
T Consensus 73 --~gm~v~t~~~~~--~~~r~~~~e~ll~~hp~dc~~c~~~ 109 (847)
T PRK08166 73 --DGTFISIDDPEA--KAFRASVVEWLMTNHPHDCPVCEEG 109 (847)
T ss_pred --CCCEEEeCCHHH--HHHHHHHHHHHHhcCCCCCCccCCC
Confidence 699998842110 1112347778888999999999865
No 80
>PTZ00038 ferredoxin; Provisional
Probab=93.92 E-value=0.086 Score=58.44 Aligned_cols=48 Identities=21% Similarity=0.490 Sum_probs=37.6
Q ss_pred EEEEEEC-CEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEEC
Q psy7003 21 TVRFTIN-GVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVT 73 (1520)
Q Consensus 21 ~~~~~in-g~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~~ 73 (1520)
.|+|.++ | ...+ +++++.+|||.+++. |+ ...++|+.|.||.|.|-|-
T Consensus 97 ~Vt~~~~~g-~~~~--~v~~geTILdAae~a-GI-~lp~sCr~G~CGtCkvrV~ 145 (191)
T PTZ00038 97 NITLQTPDG-EKVI--ECDEDEYILDAAERQ-GV-ELPYSCRGGSCSTCAAKLL 145 (191)
T ss_pred EEEEEeCCC-cEEE--EeCCCCcHHHHHHHc-CC-CCCcCCCCccCCCCEeEEe
Confidence 3666533 4 2345 578999999999875 76 7889999999999999884
No 81
>TIGR02160 PA_CoA_Oxy5 phenylacetate-CoA oxygenase/reductase, PaaK subunit. Phenylacetate-CoA oxygenase is comprised of a five gene complex responsible for the hydroxylation of phenylacetate-CoA (PA-CoA) as the second catabolic step in phenylacetic acid (PA) degradation. Although the exact function of this enzyme has not been determined, it has been shown to be required for phenylacetic acid degradation and has been proposed to function in a multicomponent oxygenase acting on phenylacetate-CoA.
Probab=93.81 E-value=0.097 Score=62.94 Aligned_cols=52 Identities=23% Similarity=0.433 Sum_probs=43.4
Q ss_pred eEEEEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEECC
Q psy7003 20 STVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTS 74 (1520)
Q Consensus 20 ~~~~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~~~ 74 (1520)
..|+|+..|+.+..- .++++.|||+.+.+. |+ -..++|+.|.||+|.|-+-.
T Consensus 263 ~~v~~~~~~~~~~~~-~~~~~~slL~~~~~~-gi-~~~~~C~~G~Cg~C~~~~~~ 314 (352)
T TIGR02160 263 SKVTVTLDGRSTETS-SLSRDESVLDAALRA-RP-DLPFACKGGVCGTCRAKVLE 314 (352)
T ss_pred eEEEEEECCceEEEE-ecCCCCcHHHHHHHc-CC-CCcCCCCCccCCCCEEEEec
Confidence 468999999987621 688999999999764 76 68899999999999998743
No 82
>cd00207 fer2 2Fe-2S iron-sulfur cluster binding domain. Iron-sulfur proteins play an important role in electron transfer processes and in various enzymatic reactions. The family includes plant and algal ferredoxins, which act as electron carriers in photosynthesis and ferredoxins, which participate in redox chains (from bacteria to mammals). Fold is ismilar to thioredoxin.
Probab=93.70 E-value=0.076 Score=50.22 Aligned_cols=50 Identities=38% Similarity=0.759 Sum_probs=39.2
Q ss_pred eEEEECCEEEEecccCCCCcchhHHHHhhhcccCccccccCCCccceeeeeccC
Q psy7003 298 VRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTSS 351 (1520)
Q Consensus 298 ~~f~~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~~g~cGactV~v~~~ 351 (1520)
++|..||....+ ++++++||++.|++ .++. ....|..|.||.|.|.|..-
T Consensus 1 v~~~~~~~~~~~--~~~~g~~ll~al~~-~g~~-~~~~C~~g~Cg~C~v~v~~G 50 (84)
T cd00207 1 VTINVPGSGVEV--EVPEGETLLDAARE-AGID-IPYSCRAGACGTCKVEVVEG 50 (84)
T ss_pred CEEecCCCCEEE--EECCCCcHHHHHHH-cCCC-cccCCCCcCCcCCEEEEeeC
Confidence 357776665555 57889999999998 6766 67789999999999988543
No 83
>PLN02593 adrenodoxin-like ferredoxin protein
Probab=93.25 E-value=0.11 Score=53.30 Aligned_cols=81 Identities=20% Similarity=0.312 Sum_probs=55.5
Q ss_pred EEEE-EECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCC-CCCCeeEEEE-CCc--cC---CC----------Ccc
Q psy7003 21 TVRF-TINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCRE-GGCGVCTVTV-TSS--HP---VT----------GVD 82 (1520)
Q Consensus 21 ~~~~-~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~-g~cGactv~~-~~~--~~---~~----------~~~ 82 (1520)
+|+| ..+|+.+++ ++++++||++.+++. |+. ....|+. |.||.|-|.| ++. +. .+ ...
T Consensus 2 ~V~fi~~~G~~~~v--~~~~G~tLl~a~~~~-gi~-i~~~CgG~g~C~tC~V~V~~~~~~~~l~~~~~~E~~~L~~~~~~ 77 (117)
T PLN02593 2 SVTFVDKDGEERTV--KAPVGMSLLEAAHEN-DIE-LEGACEGSLACSTCHVIVMDEKVYNKLPEPTDEENDMLDLAFGL 77 (117)
T ss_pred EEEEEcCCCCEEEE--EECCCCcHHHHHHHc-CCC-CCccCCCcceeCCCEEEEecCccccCCCCCChHHHHHHhcccCC
Confidence 4777 478988888 688999999999874 774 7779995 9999999999 321 11 11 111
Q ss_pred cccccccchhhHHh-cCCcEEEEe
Q psy7003 83 STYSVNACLVLVHM-CGGWAITTV 105 (1520)
Q Consensus 83 ~~~~v~scl~~~~~-~~g~~i~T~ 105 (1520)
.-.+..||.+.+.. ++|..|..-
T Consensus 78 ~~~sRLaCQ~~v~~~~~~~~v~ip 101 (117)
T PLN02593 78 TETSRLGCQVIAKPELDGMRLALP 101 (117)
T ss_pred CCCeEecceeEeecCCCCEEEEcC
Confidence 12345888886643 466666543
No 84
>PRK10684 HCP oxidoreductase, NADH-dependent; Provisional
Probab=92.92 E-value=0.12 Score=61.91 Aligned_cols=50 Identities=28% Similarity=0.484 Sum_probs=38.2
Q ss_pred EEEEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEECC
Q psy7003 21 TVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTS 74 (1520)
Q Consensus 21 ~~~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~~~ 74 (1520)
.+++++++....+ .++++.|||+.+++. |+ -..++|+.|.||.|.|-+..
T Consensus 248 ~~~v~~~~~~~~~--~~~~~~~lL~~~~~~-gi-~~~~~C~~G~Cg~C~~~~~~ 297 (332)
T PRK10684 248 GLTFTKLQPAREF--YAPVGTTLLEALESN-KV-PVVAACRAGVCGCCKTKVVS 297 (332)
T ss_pred ceEEEEecCCEEE--EeCCCChHHHHHHHc-CC-CccCCCCCcCCCCCEEEEec
Confidence 3455554444445 577999999999764 76 78999999999999998843
No 85
>TIGR01941 nqrF NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit. This model represents the NqrF subunit of the six-protein, Na(+)-pumping NADH-quinone reductase of a number of marine and pathogenic Gram-negative bacteria. This oxidoreductase complex functions primarily as a sodium ion pump.
Probab=92.85 E-value=0.072 Score=65.53 Aligned_cols=62 Identities=27% Similarity=0.461 Sum_probs=45.7
Q ss_pred eecCCCCCCCceEEEEEECC-EEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCC-CCCCeeEEEECC
Q psy7003 9 ILLPRLFSDTSSTVRFTING-VVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCRE-GGCGVCTVTVTS 74 (1520)
Q Consensus 9 ~~~~~~~~~~~~~~~~~ing-~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~-g~cGactv~~~~ 74 (1520)
|+-++-.-..+..|++++|| ....+ ++++++|||+.++.. |+. ..+.|+. |.||.|.|.|..
T Consensus 19 ~~~~~~~~~~~~~v~v~~~~~~~~~~--~~~~g~tlL~a~~~~-gi~-i~~~C~g~G~Cg~C~v~v~~ 82 (405)
T TIGR01941 19 ILFAKSKLVSSGDITIGINDDEEKSI--TVPAGGKLLNTLASN-GIF-ISSACGGGGTCGQCRVRVVE 82 (405)
T ss_pred HHHHHhhccccccEEEEEcCCCceEE--EECCCChHHHHHHHc-CCC-CcccCCCccEeCCCEEEEcc
Confidence 44444443344559999985 44555 578999999999875 765 7789996 799999999854
No 86
>PRK07609 CDP-6-deoxy-delta-3,4-glucoseen reductase; Validated
Probab=92.80 E-value=0.11 Score=62.17 Aligned_cols=47 Identities=21% Similarity=0.521 Sum_probs=38.3
Q ss_pred EEEEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEEC
Q psy7003 21 TVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVT 73 (1520)
Q Consensus 21 ~~~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~~ 73 (1520)
+|+|.-+|+.+ +++++.|||+.+++. |+. ..++|+.|.||.|.|.+.
T Consensus 4 ~v~~~~~~~~~----~~~~g~tlL~a~~~~-gi~-~~~~C~~G~Cg~C~~~~~ 50 (339)
T PRK07609 4 QVTLQPSGRQF----TAEPDETILDAALRQ-GIH-LPYGCKNGACGSCKGRLL 50 (339)
T ss_pred EEEEecCCeEE----EeCCCCcHHHHHHHc-CCC-CCCCCCCeECCCCEEEEE
Confidence 57777777654 467999999999875 764 899999999999999763
No 87
>PF00111 Fer2: 2Fe-2S iron-sulfur cluster binding domain; InterPro: IPR001041 The ferredoxin protein family are electron carrier proteins with an iron-sulphur cofactor that act in a wide variety of metabolic reactions. Ferredoxins can be divided into several subgroups depending upon the physiological nature of the iron-sulphur cluster(s) and according to sequence similarities. This entry represents members of the 2Fe-2S ferredoxin family that have a general core structure consisting of beta(2)-alpha-beta(2), which includes putidaredoxin and terpredoxin, and adrenodoxin [, , , ]. They are proteins of around one hundred amino acids with four conserved cysteine residues to which the 2Fe-2S cluster is ligated. This conserved region is also found as a domain in various metabolic enzymes and in multidomain proteins, such as aldehyde oxidoreductase (N-terminal), xanthine oxidase (N-terminal), phthalate dioxygenase reductase (C-terminal), succinate dehydrogenase iron-sulphur protein (N-terminal), and methane monooxygenase reductase (N-terminal).; GO: 0009055 electron carrier activity, 0051536 iron-sulfur cluster binding; PDB: 3M9S_C 2FUG_L 3IAS_L 2YBB_3 3IAM_3 3I9V_3 1JQ4_A 1DOX_A 1DOY_A 2KAJ_A ....
Probab=92.35 E-value=0.14 Score=47.99 Aligned_cols=48 Identities=46% Similarity=0.818 Sum_probs=37.4
Q ss_pred EECCEEEEecccCCCCcc-hhHHHHhhhcccCccccccCCCccceeeeeccC
Q psy7003 301 TINGVVYIIGAEVPPGTR-LVDFIRDYARLKGTKYMCREGGCGVCTVTVTSS 351 (1520)
Q Consensus 301 ~~ng~~~~~~~~~~~~~t-ll~~Lr~~~~l~gtk~~C~~g~cGactV~v~~~ 351 (1520)
++||+.+++ +++++.| |++.|++ ++-.+.+..|..|.||.|.|.|.+.
T Consensus 2 ~i~g~~~~~--~~~~~~~~ll~~~~~-~~gi~i~~~C~~g~Cg~C~v~v~~G 50 (78)
T PF00111_consen 2 TINGKGVTV--EVPPGETLLLDALER-AGGIGIPYSCGGGGCGTCRVRVLEG 50 (78)
T ss_dssp ETTTEEEEE--EEETTSBBHHHHHHH-TTTTTSTTSSSSSSSSTTEEEEEES
T ss_pred EECCeEEEE--EeCCCccHHHHHHHH-cCCCCcccCCCCCccCCcEEEEeeC
Confidence 568887777 4667888 9999997 4355566789999999999988544
No 88
>PRK05464 Na(+)-translocating NADH-quinone reductase subunit F; Provisional
Probab=91.90 E-value=0.14 Score=63.20 Aligned_cols=51 Identities=33% Similarity=0.578 Sum_probs=40.6
Q ss_pred ceEEEEEECCE-EEEEcccCCCCCchHHHHHhhcCCCCCcCCCCC-CCCCeeEEEEC
Q psy7003 19 SSTVRFTINGV-VYIIGAEVPPGTRLVDFIRDYARLKGTKYMCRE-GGCGVCTVTVT 73 (1520)
Q Consensus 19 ~~~~~~~ing~-~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~-g~cGactv~~~ 73 (1520)
+.++++++||. ..++ +++++.|||+.++.. |+. ..+.|+. |.||.|.|.|.
T Consensus 33 ~~~~~i~~~~~~~~~~--~~~~g~tLL~a~~~~-gi~-i~~~C~g~G~CgtC~v~v~ 85 (409)
T PRK05464 33 SGDVTIKINGDPEKTI--TVPAGGKLLGALASN-GIF-LSSACGGGGSCGQCRVKVK 85 (409)
T ss_pred CccEEEEEcCCCcEEE--EECCCchHHHHHHHc-CCC-cccCCCCccEeCCCEEEEe
Confidence 34588889983 3455 578999999999875 764 6788995 99999999884
No 89
>COG0633 Fdx Ferredoxin [Energy production and conversion]
Probab=91.30 E-value=0.29 Score=49.12 Aligned_cols=48 Identities=31% Similarity=0.612 Sum_probs=36.4
Q ss_pred EEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEECC
Q psy7003 24 FTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTS 74 (1520)
Q Consensus 24 ~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~~~ 74 (1520)
..++|+...+. .++.+.+||+.+.+. |+. .-+.|+.|.||+|.|.|..
T Consensus 7 v~~~~~~~~~~-~~~~g~tiLe~a~~~-gi~-i~~~C~~g~C~TC~v~v~~ 54 (102)
T COG0633 7 VTIDGEGDVTE-AVNEGETLLEAAERN-GIP-IEYACRGGACGTCRVKVLE 54 (102)
T ss_pred EeccCCcceEE-eccCCcHHHHHHHHC-CCc-ceecCCCCccCccEEEEec
Confidence 34455333332 566799999999765 777 7799999999999999865
No 90
>TIGR02007 fdx_isc ferredoxin, 2Fe-2S type, ISC system. This family consists of proteobacterial ferredoxins associated with and essential to the ISC system of 2Fe-2S cluster assembly. This family is closely related to (but excludes) eukaryotic (mitochondrial) adrenodoxins, which are ferredoxins involved in electron transfer to P450 cytochromes.
Probab=90.69 E-value=0.32 Score=49.39 Aligned_cols=37 Identities=24% Similarity=0.563 Sum_probs=30.8
Q ss_pred cCCCCCchHHHHHhhcCCCCCcCCCC-CCCCCeeEEEECC
Q psy7003 36 EVPPGTRLVDFIRDYARLKGTKYMCR-EGGCGVCTVTVTS 74 (1520)
Q Consensus 36 ~~~~~~~l~~~lr~~~~l~g~k~~c~-~g~cGactv~~~~ 74 (1520)
+++++++||+.+++. |+. .-+.|+ .|.||.|-|.|..
T Consensus 19 ~~~~g~tLL~a~~~~-gi~-i~~~CgG~G~CgtC~v~V~~ 56 (110)
T TIGR02007 19 EAKPGETILDVALDN-GIE-IEHACEKSCACTTCHCIVRE 56 (110)
T ss_pred EECCCChHHHHHHHc-CCC-ccccCCCCceeCCCEEEEee
Confidence 467999999999875 765 778999 6999999998843
No 91
>PF13510 Fer2_4: 2Fe-2S iron-sulfur cluster binding domain; PDB: 1Y56_A 3ADA_A 1VRQ_A 1X31_A 3AD9_A 3AD8_A 3AD7_A 2GAG_A 2GAH_A.
Probab=90.58 E-value=0.36 Score=46.57 Aligned_cols=51 Identities=29% Similarity=0.546 Sum_probs=36.8
Q ss_pred cceEEEECCEEEEecccCCCCcchhHHHHhh----hcccCc----cccccCCCccceeeeecc
Q psy7003 296 STVRFTINGVVYIIGAEVPPGTRLVDFIRDY----ARLKGT----KYMCREGGCGVCTVTVTS 350 (1520)
Q Consensus 296 ~~~~f~~ng~~~~~~~~~~~~~tll~~Lr~~----~~l~gt----k~~C~~g~cGactV~v~~ 350 (1520)
++++|++||..+.. ++|.||++.|+.. -++... ...|..|.|+.|-|.|..
T Consensus 2 ~~v~i~idG~~v~~----~~G~til~al~~~gi~ip~~c~~~~~r~~~~~~g~C~~C~Vev~g 60 (82)
T PF13510_consen 2 KMVTITIDGKPVEV----PPGETILEALLAAGIDIPRLCYHGRPRGGLCPIGSCRLCLVEVDG 60 (82)
T ss_dssp EEEEEEETTEEEEE----EET-BHHHHHHHTT--B-EETTTS-EEBSSSSSTT-SS-EEEESS
T ss_pred CEEEEEECCEEEEE----cCCCHHHHHHHHCCCeEEEeeeccCcccccCCccccceEEEEECC
Confidence 68999999999766 4799999999873 223333 556888999999999853
No 92
>PRK12386 fumarate reductase iron-sulfur subunit; Provisional
Probab=90.53 E-value=0.27 Score=57.01 Aligned_cols=39 Identities=26% Similarity=0.671 Sum_probs=33.4
Q ss_pred cCCCCcchhHHHHhhhcc-----cCccccccCCCccceeeeeccC
Q psy7003 312 EVPPGTRLVDFIRDYARL-----KGTKYMCREGGCGVCTVTVTSS 351 (1520)
Q Consensus 312 ~~~~~~tll~~Lr~~~~l-----~gtk~~C~~g~cGactV~v~~~ 351 (1520)
+.++++|||++||+ .+. .+.+.+|..|-||+|+|.|...
T Consensus 25 ~~~~~~tvLd~L~~-i~~~~d~~l~~r~~C~~g~CGsCa~~InG~ 68 (251)
T PRK12386 25 EVNEGEVVLDVIHR-LQATQAPDLAVRWNCKAGKCGSCSAEINGR 68 (251)
T ss_pred eCCCCCCHHHHHHH-hccccCCCCcccCCCCCCcCCCCEEEECcc
Confidence 56789999999999 444 4889999999999999999653
No 93
>PRK05713 hypothetical protein; Provisional
Probab=89.58 E-value=0.47 Score=56.39 Aligned_cols=45 Identities=27% Similarity=0.625 Sum_probs=36.3
Q ss_pred EEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEEC
Q psy7003 23 RFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVT 73 (1520)
Q Consensus 23 ~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~~ 73 (1520)
+|++||+.+. ++++.||||.+++. |+ -..++|+.|.||.|.|.|-
T Consensus 3 ~~~~~~~~~~----~~~g~tlL~a~~~~-gi-~~~~~C~~G~Cg~C~~~~~ 47 (312)
T PRK05713 3 ELRVGERRWS----VPAGSNLLDALNAA-GV-AVPYSCRAGSCHACLVRCL 47 (312)
T ss_pred cEecCCeEEE----ECCCCcHHHHHHHc-CC-CCCcCCCCcCCCCCeEEEE
Confidence 4678998654 56999999999864 54 3567899999999999983
No 94
>PF01565 FAD_binding_4: FAD binding domain This is only a subset of the Pfam family; InterPro: IPR006094 Various enzymes use FAD as a co-factor, most of these enzymes are oxygen-dependent oxidoreductases, containing a covalently bound FAD group which is attached to a histidine via an 8-alpha-(N3-histidyl)-riboflavin linkage. One of the enzymes Vanillyl-alcohol oxidase (VAO, 1.1.3.38 from EC) has a solved structure, the alignment includes the FAD binding site, called the PP-loop, between residues 99-110 []. The FAD molecule is covalently bound in the known structure, however the residue that links to the FAD is not in the alignment. VAO catalyses the oxidation of a wide variety of substrates, ranging from aromatic amines to 4-alkylphenols. ; GO: 0008762 UDP-N-acetylmuramate dehydrogenase activity, 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZR6_A 3HSU_A 2AXR_A 3D2J_A 3D2H_A 3FW9_A 3FW8_A 3FW7_A 3GSY_A 3FWA_A ....
Probab=89.22 E-value=0.89 Score=47.15 Aligned_cols=80 Identities=15% Similarity=0.162 Sum_probs=55.7
Q ss_pred EEEEcCCHHHHHHHHhcCC-CCCCcEEEEecchhhhccCCCCCCeeeeCCCcccccceEEeCCeEEEccccCHHHHHHhh
Q psy7003 517 IWYIVTEVREIFEIFDGLE-ANQTYMLVGGNTGYGVYRPRVPVDVYIQIRDIKELRQIFTRNGYVLMGSATTLTEAMDYF 595 (1520)
Q Consensus 517 ~~~rPtSLeEal~ll~~~p-~~~~a~lVAGGTdLgv~~k~~~~~~lIdIs~I~EL~~I~~~~~~L~IGA~vTlsel~e~L 595 (1520)
.+++|+|.+|+.++++... .+-..++.+||+...-.. ......+||++++...-.+..++..++++|++++.++.+.+
T Consensus 3 ~vv~P~s~~ev~~~v~~a~~~~~~v~~~g~G~~~~~~~-~~~~~ivi~~~~l~~i~~id~~~~~v~v~aG~~~~~l~~~l 81 (139)
T PF01565_consen 3 AVVRPKSVEEVQAIVKFANENGVPVRVRGGGHSWTGQS-SDEGGIVIDMSRLNKIIEIDPENGTVTVGAGVTWGDLYEAL 81 (139)
T ss_dssp EEEEESSHHHHHHHHHHHHHTTSEEEEESSSTTSSSTT-SSTTEEEEECTTCGCEEEEETTTTEEEEETTSBHHHHHHHH
T ss_pred EEEEeCCHHHHHHHHHHHHHcCCcEEEEcCCCCccccc-ccCCcEEEeeccccccccccccceeEEEeccccchhccccc
Confidence 3689999999998876321 113477778888776222 22336899998755433344447899999999999999977
Q ss_pred hh
Q psy7003 596 DR 597 (1520)
Q Consensus 596 ~~ 597 (1520)
..
T Consensus 82 ~~ 83 (139)
T PF01565_consen 82 AP 83 (139)
T ss_dssp HH
T ss_pred cc
Confidence 43
No 95
>COG3383 Uncharacterized anaerobic dehydrogenase [General function prediction only]
Probab=88.38 E-value=0.84 Score=58.80 Aligned_cols=97 Identities=20% Similarity=0.330 Sum_probs=71.5
Q ss_pred EEEEEECCEEEEEcccCCCCCchHHHHHhhcCCCCC-----cCCCCCCCCCeeEEEECCccCCCCcccccccccchhhHH
Q psy7003 21 TVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGT-----KYMCREGGCGVCTVTVTSSHPVTGVDSTYSVNACLVLVH 95 (1520)
Q Consensus 21 ~~~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~-----k~~c~~g~cGactv~~~~~~~~~~~~~~~~v~scl~~~~ 95 (1520)
.++++|||+.+. |++++|+|+++.+. |+.=. +..=.-+.|-.|.|.++|. -+.||-+++.
T Consensus 5 ~i~vtidg~~~~----v~~G~tiL~a~~~~-gI~iP~iCy~~~l~pi~sCd~ClVEidG~----------l~rsCsT~v~ 69 (978)
T COG3383 5 MITVTIDGRSIE----VEEGTTILRAANRN-GIEIPHICYHESLGPIGSCDTCLVEIDGK----------LVRSCSTPVE 69 (978)
T ss_pred eEEEEECCeEEe----cCCChHHHHHHHhc-CCcccceeccCCCCcccccceEEEEecCc----------eecccccccc
Confidence 489999999765 56999999999753 54433 3334458999999999996 8999999985
Q ss_pred hcCCcEEEEecCCCCCCCCCCHHHHHHHHhCCCCCCCCchh
Q psy7003 96 MCGGWAITTVEGLGSKKKGYHNVQTRLATMNGSQCGYCSPG 136 (1520)
Q Consensus 96 ~~~g~~i~T~eg~~~~~~~~h~vq~~~~~~~~~qcg~ctpg 136 (1520)
+|..|.|..-.- ++.-..+-.++...|-.-|--|--+
T Consensus 70 --dGm~v~t~s~rv--k~~r~~~md~~l~nH~LyC~vCd~n 106 (978)
T COG3383 70 --DGMVVRTNSERV--KEARREAMDRILSNHPLYCTVCDNN 106 (978)
T ss_pred --CCcEEecccHHH--HHHHHHHHHHHHhcCCcCccccCCC
Confidence 799999854322 1111234467788898889888766
No 96
>COG1034 NuoG NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) [Energy production and conversion]
Probab=87.97 E-value=0.77 Score=59.95 Aligned_cols=98 Identities=28% Similarity=0.387 Sum_probs=71.4
Q ss_pred EEEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCc----CCCCC-CCCCeeEEEECCccCCCCcccccccccchhhHHh
Q psy7003 22 VRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTK----YMCRE-GGCGVCTVTVTSSHPVTGVDSTYSVNACLVLVHM 96 (1520)
Q Consensus 22 ~~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k----~~c~~-g~cGactv~~~~~~~~~~~~~~~~v~scl~~~~~ 96 (1520)
++++|||+.++ ++.+.|||+..|+ .|+.=.. ..|+. |-|.-|.|.|.|.. +++.||.+|+-
T Consensus 2 ~tI~IDG~ei~----v~~g~tvLqAa~~-aGi~IP~fCyh~~ls~~GaCRmClVEveg~~--------k~~~SC~tpv~- 67 (693)
T COG1034 2 VTITIDGKEIE----VPEGETVLQAARE-AGIDIPTFCYHPRLSIAGACRMCLVEVEGAP--------KLVASCATPVT- 67 (693)
T ss_pred eEEEECCEEEe----cCCCcHHHHHHHH-cCCCCCcccccCCCCcccceeEEEEEecCCC--------ccccccccccC-
Confidence 57899999765 5689999999986 4654322 23333 88999999999952 48999999764
Q ss_pred cCCcEEEEecCCCCCCCCCCHHHHHHHHhCCCCCCCCchh
Q psy7003 97 CGGWAITTVEGLGSKKKGYHNVQTRLATMNGSQCGYCSPG 136 (1520)
Q Consensus 97 ~~g~~i~T~eg~~~~~~~~h~vq~~~~~~~~~qcg~ctpg 136 (1520)
+|+.|.|==-. -++.-+-|-+.|...|-.-|+-|.-|
T Consensus 68 -dGM~I~T~s~~--vk~~R~~vmE~LLiNHPlDCpiCD~g 104 (693)
T COG1034 68 -DGMVISTNSEE--VKKAREGVMEFLLINHPLDCPVCDKG 104 (693)
T ss_pred -CCeEEecCCHH--HHHHHHHHHHHHHhcCCCCCCccCCC
Confidence 78887652100 01123567888999999999999877
No 97
>KOG2282|consensus
Probab=86.52 E-value=1.3 Score=54.74 Aligned_cols=101 Identities=26% Similarity=0.479 Sum_probs=78.7
Q ss_pred ceEEEEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCC------CCCCCeeEEEECCccCCCCcccccccccchh
Q psy7003 19 SSTVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCR------EGGCGVCTVTVTSSHPVTGVDSTYSVNACLV 92 (1520)
Q Consensus 19 ~~~~~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~------~g~cGactv~~~~~~~~~~~~~~~~v~scl~ 92 (1520)
..+|..+|+|+.+. |+|++|+|..... .|..=.++ |- -|.|--|-|.|.+.. ++|-||-+
T Consensus 30 ~~~ievfvd~~~v~----v~pg~tvlqac~~-~gv~iprf-cyh~rlsvagncrmclveveksp--------kpva~cam 95 (708)
T KOG2282|consen 30 PNKIEVFVDDQSVM----VEPGTTVLQACAK-VGVDIPRF-CYHERLSVAGNCRMCLVEVEKSP--------KPVAACAM 95 (708)
T ss_pred ccceEEEECCeeEe----eCCCcHHHHHHHH-hCCCcchh-hhhhhhhhccceeEEEEEeccCC--------Ccchhhcc
Confidence 46799999999876 5699999998843 46554433 44 389999999999863 58999999
Q ss_pred hHHhcCCcEEEEecCCCCCCCCCCHHHHHHHHhCCCCCCCCchhH
Q psy7003 93 LVHMCGGWAITTVEGLGSKKKGYHNVQTRLATMNGSQCGYCSPGM 137 (1520)
Q Consensus 93 ~~~~~~g~~i~T~eg~~~~~~~~h~vq~~~~~~~~~qcg~ctpg~ 137 (1520)
|+ ..||.|.|=--+. ++.-.-|-+-|.-+|---|..|.-|=
T Consensus 96 pv--m~g~~iktns~~~--kkaregvmefll~nhpldcpicdqgg 136 (708)
T KOG2282|consen 96 PV--MKGWKIKTNSDKS--KKAREGVMEFLLMNHPLDCPICDQGG 136 (708)
T ss_pred cc--cCCceeecCchHH--HHHHHHHHHHHHhCCCCCCCccCCCC
Confidence 97 4799999965554 23345688889999999999998873
No 98
>PRK14653 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=81.66 E-value=4 Score=48.60 Aligned_cols=79 Identities=15% Similarity=0.137 Sum_probs=57.1
Q ss_pred cEEEEcCCHHHHHHHHhcCCCCCCcEEEEecchhhhccCCCCCCeeeeCCCcccccceEEeCCeEEEccccCHHHHHHhh
Q psy7003 516 GIWYIVTEVREIFEIFDGLEANQTYMLVGGNTGYGVYRPRVPVDVYIQIRDIKELRQIFTRNGYVLMGSATTLTEAMDYF 595 (1520)
Q Consensus 516 ~~~~rPtSLeEal~ll~~~p~~~~a~lVAGGTdLgv~~k~~~~~~lIdIs~I~EL~~I~~~~~~L~IGA~vTlsel~e~L 595 (1520)
..|+.|.|.+|+.++++-...+-...+++|||.+.+--.- ....+|.+++ |+.|+.+++.+++||++++.++...+
T Consensus 35 ~~~v~p~s~eel~~~~~~~~~~~p~~vlG~GSNlLv~d~g-~~gvVI~l~~---~~~i~i~~~~v~v~AG~~l~~L~~~~ 110 (297)
T PRK14653 35 PLFAIPNSTNGFIETINLLKEGIEVKILGNGTNVLPKDEP-MDFVVVSTER---LDDIFVDNDKIICESGLSLKKLCLVA 110 (297)
T ss_pred EEEEecCCHHHHHHHHHHHhcCCCEEEEcCCeeEEEecCC-ccEEEEEeCC---cCceEEeCCEEEEeCCCcHHHHHHHH
Confidence 4588999999999887622111248889999998775431 1256777644 56666677899999999999999866
Q ss_pred hhc
Q psy7003 596 DRT 598 (1520)
Q Consensus 596 ~~~ 598 (1520)
.+.
T Consensus 111 ~~~ 113 (297)
T PRK14653 111 AKN 113 (297)
T ss_pred HHC
Confidence 653
No 99
>TIGR01676 GLDHase galactonolactone dehydrogenase. This model represents L-Galactono-gamma-lactone dehydrogenase (EC 1.3.2.3). This enzyme catalyzes the final step in ascorbic acid biosynthesis in higher plants. This protein is homologous to ascorbic acid biosynthesis enzymes of other species: L-gulono-gamma-lactone oxidase in rat and L-galactono-gamma-lactone oxidase in yeast. All three covalently bind the cofactor FAD.
Probab=81.36 E-value=1.6 Score=55.84 Aligned_cols=80 Identities=8% Similarity=0.041 Sum_probs=57.4
Q ss_pred cEEEEcCCHHHHHHHHhcCCC-CCCcEEEEecchhhhccCCCCCCeeeeCCCcccccceEEeCCeEEEccccCHHHHHHh
Q psy7003 516 GIWYIVTEVREIFEIFDGLEA-NQTYMLVGGNTGYGVYRPRVPVDVYIQIRDIKELRQIFTRNGYVLMGSATTLTEAMDY 594 (1520)
Q Consensus 516 ~~~~rPtSLeEal~ll~~~p~-~~~a~lVAGGTdLgv~~k~~~~~~lIdIs~I~EL~~I~~~~~~L~IGA~vTlsel~e~ 594 (1520)
..+++|+|.+|+.++++...+ +...+.++||++..-..-. ...+||++++..+-.+..+...++++|++++.+|.+.
T Consensus 63 ~~~~~P~s~eEV~~iV~~A~~~g~~Vr~~GsGhS~sg~a~t--~g~lldL~~ln~Vl~vD~~~~tVtV~AG~~l~~L~~~ 140 (541)
T TIGR01676 63 RTFHQPEAIEELEGIVKQANEKKARIRPVGSGLSPNGIGLS--RAGMVNLALMDKVLEVDEEKKRVRVQAGIRVQQLVDA 140 (541)
T ss_pred ceEECCCCHHHHHHHHHHHHHcCCcEEEECCCcCCCCcccC--CCeEEEhhhCCCCEEEcCCCCEEEEcCCCCHHHHHHH
Confidence 357999999999998864321 1247788888776432111 1358999887666555666789999999999999986
Q ss_pred hhh
Q psy7003 595 FDR 597 (1520)
Q Consensus 595 L~~ 597 (1520)
|..
T Consensus 141 L~~ 143 (541)
T TIGR01676 141 IKE 143 (541)
T ss_pred HHH
Confidence 654
No 100
>PRK09970 xanthine dehydrogenase subunit XdhA; Provisional
Probab=81.22 E-value=35 Score=45.95 Aligned_cols=59 Identities=24% Similarity=0.308 Sum_probs=45.6
Q ss_pred CCCCeeEEEEeCC-eEEEEeCCCCh-----HHHHHHHHHHhCCCCCcEEEEe-------cccCCCCCCCCCC
Q psy7003 970 MEGQTALCVPSED-GVDIYAASQWV-----TLVQESVAGVLGLPNNRVNVKT-------RRIGGGYGAKLSR 1028 (1520)
Q Consensus 970 mEp~~a~A~~~ed-~l~V~~sTQ~p-----~~vq~~vA~~LGlp~~kVrV~~-------~~vGGgFG~K~~~ 1028 (1520)
++..++......| .++|++++.-. +.+.+.+|+.||+|.++|+|.. ++-+|.||++...
T Consensus 458 ~~~~~a~v~i~~dGsv~v~~g~~e~GQG~~T~~aQiaAe~LGi~~~~V~v~~~~dT~~~p~~~gt~aSr~t~ 529 (759)
T PRK09970 458 LEIAGARLLMNQDGTVQVQSGATEIGQGSDTVFSQMVAETVGIPVSDVRVISTQDTDVTPFDPGAYASRQSY 529 (759)
T ss_pred CCcceEEEEEccCceEEEEECCCCcCCCHHHHHHHHHHHHhCCCHHhEEEEccCCCCCCCCCCCCchhhhHH
Confidence 5566777766644 59999998544 5567889999999999999983 4667888888763
No 101
>TIGR01372 soxA sarcosine oxidase, alpha subunit family, heterotetrameric form. This model describes the alpha subunit of a family of known and putative heterotetrameric sarcosine oxidases. Five operons of such oxidases are found in Mesorhizobium loti and three in Agrobacterium tumefaciens, a high enough copy number to suggest that not all members are share the same function. The model is designated as subfamily rather than equivalog for this reason.Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms
Probab=80.91 E-value=4 Score=56.14 Aligned_cols=82 Identities=22% Similarity=0.127 Sum_probs=59.4
Q ss_pred ceEEEEEECCEEEEEcccCCCCCchHHHHHhh---cCCCCCcCC------CCCCCCCeeEEEECCccCCCCccccccccc
Q psy7003 19 SSTVRFTINGVVYIIGAEVPPGTRLVDFIRDY---ARLKGTKYM------CREGGCGVCTVTVTSSHPVTGVDSTYSVNA 89 (1520)
Q Consensus 19 ~~~~~~~ing~~~~~~~~~~~~~~l~~~lr~~---~~l~g~k~~------c~~g~cGactv~~~~~~~~~~~~~~~~v~s 89 (1520)
+..|+|++||++++ +.++.||...|--. .--++.|++ |.-|.|--|.|.|||.. . ....+.+
T Consensus 10 ~~~~~~~~dg~~~~----~~~g~t~a~al~a~g~~~~~~s~~~~~prg~~c~~~~~~~c~v~i~~~~--~---~~~~~~a 80 (985)
T TIGR01372 10 SRPLRFTFDGKSYS----GFAGDTLASALLANGVHLVGRSFKYHRPRGILTAGVEEPNALVTVGSGA--Q---REPNTRA 80 (985)
T ss_pred CCeEEEEECCEEee----cCCCCHHHHHHHhCCCeeecccCCCCCCCcccccCccCCCeEEEECCCc--C---CCCCccc
Confidence 35799999999876 56999999988431 112344443 98777899999999731 0 0125789
Q ss_pred chhhHHhcCCcEEEEecCCCCC
Q psy7003 90 CLVLVHMCGGWAITTVEGLGSK 111 (1520)
Q Consensus 90 cl~~~~~~~g~~i~T~eg~~~~ 111 (1520)
|++++. +|..|.+.-+..+.
T Consensus 81 c~~~~~--~gm~~~~~~~~~~~ 100 (985)
T TIGR01372 81 TTQELY--DGLVATSQNRWPSL 100 (985)
T ss_pred eeEEcc--cCCEEecccCCCcc
Confidence 999985 79999998886653
No 102
>TIGR03194 4hydrxCoA_A 4-hydroxybenzoyl-CoA reductase, alpha subunit. This model represents the largest chain, alpha, of the enzyme 4-hydroxybenzoyl-CoA reductase. In species capable of degrading various aromatic compounds by way of benzoyl-CoA, this enzyme can convert 4-hydroxybenzoyl-CoA to benzoyl-CoA.
Probab=80.41 E-value=29 Score=46.60 Aligned_cols=56 Identities=21% Similarity=0.345 Sum_probs=42.6
Q ss_pred CCeeEEEEeCC-eEEEEeCCCCh-----HHHHHHHHHHhCCCCCcEEEEecc------cCCCCCCCCC
Q psy7003 972 GQTALCVPSED-GVDIYAASQWV-----TLVQESVAGVLGLPNNRVNVKTRR------IGGGYGAKLS 1027 (1520)
Q Consensus 972 p~~a~A~~~ed-~l~V~~sTQ~p-----~~vq~~vA~~LGlp~~kVrV~~~~------vGGgFG~K~~ 1027 (1520)
+.++......| .++|+++++.. +.+++.+|+.||+|.++|+|.... -+|.||++.+
T Consensus 444 ~~~a~v~l~~dG~v~v~~g~~e~GqG~~T~~~qiaAe~LGip~d~V~v~~~DT~~~p~~~gt~~Sr~t 511 (746)
T TIGR03194 444 HATVALKLDFDGGITLLTGAADIGQGSSTIASQVAAEVLGVRLSRIRVISADSALTPKDNGSYSSRVT 511 (746)
T ss_pred CceEEEEEcCCccEEEEEcCCCCCCCHHHHHHHHHHHHhCCCHHhEEEEccCCCCCCCCCCChhHhHH
Confidence 45666666645 59999888655 566889999999999999998654 4677777765
No 103
>PRK13905 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=80.11 E-value=4.7 Score=47.95 Aligned_cols=80 Identities=14% Similarity=0.177 Sum_probs=57.4
Q ss_pred cEEEEcCCHHHHHHHHhcCCC-CCCcEEEEecchhhhccCCCCCCeeeeCCCcccccceEEeCCeEEEccccCHHHHHHh
Q psy7003 516 GIWYIVTEVREIFEIFDGLEA-NQTYMLVGGNTGYGVYRPRVPVDVYIQIRDIKELRQIFTRNGYVLMGSATTLTEAMDY 594 (1520)
Q Consensus 516 ~~~~rPtSLeEal~ll~~~p~-~~~a~lVAGGTdLgv~~k~~~~~~lIdIs~I~EL~~I~~~~~~L~IGA~vTlsel~e~ 594 (1520)
..++.|.|.+|+.++++.... +-...+++||+.+.+... .....+|++++ .|+.|..+++.+++||++++.++.+.
T Consensus 32 ~~vv~P~s~edv~~~v~~a~~~~~p~~v~GgGsnll~~d~-g~~gvvI~l~~--~l~~i~~~~~~v~v~aG~~~~~L~~~ 108 (298)
T PRK13905 32 DYLVEPADIEDLQEFLKLLKENNIPVTVLGNGSNLLVRDG-GIRGVVIRLGK--GLNEIEVEGNRITAGAGAPLIKLARF 108 (298)
T ss_pred eEEEeCCCHHHHHHHHHHHHHcCCCEEEEeCCceEEecCC-CcceEEEEecC--CcceEEecCCEEEEECCCcHHHHHHH
Confidence 347899999999888752210 124888999999754221 11257889873 46677667789999999999999987
Q ss_pred hhhc
Q psy7003 595 FDRT 598 (1520)
Q Consensus 595 L~~~ 598 (1520)
+.+.
T Consensus 109 l~~~ 112 (298)
T PRK13905 109 AAEA 112 (298)
T ss_pred HHHc
Confidence 7653
No 104
>PRK05950 sdhB succinate dehydrogenase iron-sulfur subunit; Reviewed
Probab=79.96 E-value=1.3 Score=50.67 Aligned_cols=39 Identities=23% Similarity=0.417 Sum_probs=32.9
Q ss_pred cCC-CCcchhHHHHhhh----cccCccccccCCCccceeeeecc
Q psy7003 312 EVP-PGTRLVDFIRDYA----RLKGTKYMCREGGCGVCTVTVTS 350 (1520)
Q Consensus 312 ~~~-~~~tll~~Lr~~~----~l~gtk~~C~~g~cGactV~v~~ 350 (1520)
+++ +++||++.|+... .....+.+|..|.||+|+|.|..
T Consensus 23 ~~~~~~~tvl~~L~~~~~~~~~~l~~~~~c~~g~Cg~C~v~vnG 66 (232)
T PRK05950 23 DVDECGPMVLDALIKIKNEIDPTLTFRRSCREGVCGSDAMNING 66 (232)
T ss_pred CCCCCCCHHHHHHHHhCCccCCcceeeCCCCCCCCCCCEEEECC
Confidence 567 8999999999975 35566789999999999999953
No 105
>PRK13906 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=79.74 E-value=5 Score=48.03 Aligned_cols=78 Identities=10% Similarity=0.115 Sum_probs=56.5
Q ss_pred cEEEEcCCHHHHHHHHhcCCC-CCCcEEEEecchhhhccCCCCCCeeeeCCCcccccceEEeCCeEEEccccCHHHHHHh
Q psy7003 516 GIWYIVTEVREIFEIFDGLEA-NQTYMLVGGNTGYGVYRPRVPVDVYIQIRDIKELRQIFTRNGYVLMGSATTLTEAMDY 594 (1520)
Q Consensus 516 ~~~~rPtSLeEal~ll~~~p~-~~~a~lVAGGTdLgv~~k~~~~~~lIdIs~I~EL~~I~~~~~~L~IGA~vTlsel~e~ 594 (1520)
..|+.|.|.+|+.++++-... +-...+++|||.+.+... +....+|++++ |+.|..+++.+++||++++.++.+.
T Consensus 38 ~~~v~p~~~edv~~~v~~a~~~~ip~~vlGgGSNll~~d~-g~~GvvI~l~~---l~~i~~~~~~v~v~aG~~~~~l~~~ 113 (307)
T PRK13906 38 DFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIIIREG-GIRGIVISLLS---LDHIEVSDDAIIAGSGAAIIDVSRV 113 (307)
T ss_pred EEEEEcCCHHHHHHHHHHHHHcCCCEEEEcCceeEeecCC-CcceEEEEecC---ccceEEeCCEEEEECCCcHHHHHHH
Confidence 458999999999887752110 124788999998875321 11257888765 6677777789999999999999986
Q ss_pred hhh
Q psy7003 595 FDR 597 (1520)
Q Consensus 595 L~~ 597 (1520)
+.+
T Consensus 114 ~~~ 116 (307)
T PRK13906 114 ARD 116 (307)
T ss_pred HHH
Confidence 654
No 106
>PRK12436 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=77.52 E-value=5.9 Score=47.36 Aligned_cols=79 Identities=8% Similarity=0.072 Sum_probs=56.7
Q ss_pred cEEEEcCCHHHHHHHHhcCC-CCCCcEEEEecchhhhccCCCCCCeeeeCCCcccccceEEeCCeEEEccccCHHHHHHh
Q psy7003 516 GIWYIVTEVREIFEIFDGLE-ANQTYMLVGGNTGYGVYRPRVPVDVYIQIRDIKELRQIFTRNGYVLMGSATTLTEAMDY 594 (1520)
Q Consensus 516 ~~~~rPtSLeEal~ll~~~p-~~~~a~lVAGGTdLgv~~k~~~~~~lIdIs~I~EL~~I~~~~~~L~IGA~vTlsel~e~ 594 (1520)
..++.|.|.+|+.++++-.. .+-...+++|||.+.+... +....+|++++ |+.|..+++.+++||++++.++.+.
T Consensus 38 ~~vv~p~~~edv~~~l~~a~~~~ip~~v~GgGSNll~~d~-g~~GvvI~l~~---l~~i~~~~~~v~v~aG~~~~~L~~~ 113 (305)
T PRK12436 38 DVFVAPTNYDEIQEVIKYANKYNIPVTFLGNGSNVIIKDG-GIRGITVSLIH---ITGVTVTGTTIVAQCGAAIIDVSRI 113 (305)
T ss_pred EEEEecCCHHHHHHHHHHHHHcCCCEEEEcCCeEEEEeCC-CeeEEEEEeCC---cCcEEEeCCEEEEEeCCcHHHHHHH
Confidence 35789999999988875111 0124888999999874321 11257888765 5566777789999999999999987
Q ss_pred hhhc
Q psy7003 595 FDRT 598 (1520)
Q Consensus 595 L~~~ 598 (1520)
+.+.
T Consensus 114 ~~~~ 117 (305)
T PRK12436 114 ALDH 117 (305)
T ss_pred HHHc
Confidence 6653
No 107
>PRK14650 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=76.17 E-value=6.5 Score=46.98 Aligned_cols=79 Identities=10% Similarity=0.150 Sum_probs=54.9
Q ss_pred cEEEEcCCHHHHHHHHhcCCC-CCCcEEEEecchhhhccCCCCCCeeeeCCCcccccceEEeCCeEEEccccCHHHHHHh
Q psy7003 516 GIWYIVTEVREIFEIFDGLEA-NQTYMLVGGNTGYGVYRPRVPVDVYIQIRDIKELRQIFTRNGYVLMGSATTLTEAMDY 594 (1520)
Q Consensus 516 ~~~~rPtSLeEal~ll~~~p~-~~~a~lVAGGTdLgv~~k~~~~~~lIdIs~I~EL~~I~~~~~~L~IGA~vTlsel~e~ 594 (1520)
..|+.|.|.+|+.++++.... +-...+++||+-+.+.-.--....+|.+.+ ++.++..++.|++||++.+.++...
T Consensus 34 ~~~~~p~~~~eL~~~l~~~~~~~~p~~vlG~GSNlLv~D~g~~~g~vi~~~~---~~~i~~~~~~v~a~AG~~~~~l~~~ 110 (302)
T PRK14650 34 KLFLTPKTIKDAEHIFKAAIEEKIKIFILGGGSNILINDEEEIDFPIIYTGH---LNKIEIHDNQIVAECGTNFEDLCKF 110 (302)
T ss_pred EEEEecCCHHHHHHHHHHHHHcCCCEEEEeceeEEEEECCCccceEEEEECC---cCcEEEeCCEEEEEeCCcHHHHHHH
Confidence 458899999999888763211 124888999998876432101135565433 6677767789999999999999886
Q ss_pred hhh
Q psy7003 595 FDR 597 (1520)
Q Consensus 595 L~~ 597 (1520)
..+
T Consensus 111 ~~~ 113 (302)
T PRK14650 111 ALQ 113 (302)
T ss_pred HHH
Confidence 554
No 108
>PRK14652 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=75.92 E-value=7 Score=46.72 Aligned_cols=80 Identities=9% Similarity=0.123 Sum_probs=56.6
Q ss_pred cEEEEcCCHHHHHHHHhcCCC-CCCcEEEEecchhhhccCCCCCCeeeeCCCcccccceEEeCCeEEEccccCHHHHHHh
Q psy7003 516 GIWYIVTEVREIFEIFDGLEA-NQTYMLVGGNTGYGVYRPRVPVDVYIQIRDIKELRQIFTRNGYVLMGSATTLTEAMDY 594 (1520)
Q Consensus 516 ~~~~rPtSLeEal~ll~~~p~-~~~a~lVAGGTdLgv~~k~~~~~~lIdIs~I~EL~~I~~~~~~L~IGA~vTlsel~e~ 594 (1520)
..++.|+|.+|+.++++...+ +-...+++|||.+.+-.. +....+|++++. +..+..+++.+++||++++.++.+.
T Consensus 37 ~~~v~p~~~edl~~~v~~a~~~~ip~~vlGgGSNllv~d~-g~~gvVI~l~~~--~~~i~~~~~~v~v~AG~~~~~L~~~ 113 (302)
T PRK14652 37 DLLVRPADPDALSALLRAVRELGVPLSILGGGANTLVADA-GVRGVVLRLPQD--FPGESTDGGRLVLGAGAPISRLPAR 113 (302)
T ss_pred eEEEEcCCHHHHHHHHHHHHHCCCcEEEEcCCcceeecCC-CEeeEEEEecCC--cceEEecCCEEEEECCCcHHHHHHH
Confidence 457899999999887762210 124888999999864321 112578888652 4556666789999999999999987
Q ss_pred hhhc
Q psy7003 595 FDRT 598 (1520)
Q Consensus 595 L~~~ 598 (1520)
+.+.
T Consensus 114 ~~~~ 117 (302)
T PRK14652 114 AHAH 117 (302)
T ss_pred HHHc
Confidence 6653
No 109
>TIGR00384 dhsB succinate dehydrogenase and fumarate reductase iron-sulfur protein. Succinate dehydrogenase and fumarate reductase are reverse directions of the same enzymatic interconversion, succinate + FAD+ = fumarate + FADH2 (EC 1.3.11.1). In E. coli, the forward and reverse reactions are catalyzed by distinct complexes: fumarate reductase operates under anaerobic conditions and succinate dehydrogenase operates under aerobic conditions. This model also describes a region of the B subunit of a cytosolic archaeal fumarate reductase.
Probab=74.17 E-value=3.3 Score=47.09 Aligned_cols=39 Identities=23% Similarity=0.487 Sum_probs=31.9
Q ss_pred cCCCCcchhHHHHhhh----cccCccccccCCCccceeeeecc
Q psy7003 312 EVPPGTRLVDFIRDYA----RLKGTKYMCREGGCGVCTVTVTS 350 (1520)
Q Consensus 312 ~~~~~~tll~~Lr~~~----~l~gtk~~C~~g~cGactV~v~~ 350 (1520)
++++++||++.|+... ...+.+.+|..|-||+|+|.|..
T Consensus 20 ~~~~~~tvl~~l~~i~~~~~~~l~~~~~C~~g~Cg~C~v~vnG 62 (220)
T TIGR00384 20 PADEGMTVLDALNYIKDEQDPSLAFRRSCRNGICGSCAMNVNG 62 (220)
T ss_pred eCCCCCcHHHHHHHHHHhcCCCceeecccCCCCCCCCeeEECC
Confidence 4679999999999854 34455789999999999999853
No 110
>TIGR01679 bact_FAD_ox FAD-linked oxidoreductase. This model represents a family of bacterial oxidoreductases with covalently linked FAD, closely related to two different eukaryotic oxidases, L-gulonolactone oxidase (EC 1.1.3.8) from rat and D-arabinono-1,4-lactone oxidase (EC 1.1.3.37) from Saccharomyces cerevisiae.
Probab=73.21 E-value=7.4 Score=48.47 Aligned_cols=78 Identities=10% Similarity=0.107 Sum_probs=55.9
Q ss_pred cEEEEcCCHHHHHHHHhcCCCCCCcEEEEecchhhhccCCCCCCeeeeCCCcccccceEEeCCeEEEccccCHHHHHHhh
Q psy7003 516 GIWYIVTEVREIFEIFDGLEANQTYMLVGGNTGYGVYRPRVPVDVYIQIRDIKELRQIFTRNGYVLMGSATTLTEAMDYF 595 (1520)
Q Consensus 516 ~~~~rPtSLeEal~ll~~~p~~~~a~lVAGGTdLgv~~k~~~~~~lIdIs~I~EL~~I~~~~~~L~IGA~vTlsel~e~L 595 (1520)
...++|+|.+|+.++++... ...++++||.+.....- ....+||++++..+-.+..+.+.++++|++++.++.+.+
T Consensus 13 ~~v~~P~s~~ev~~~v~~a~--~~v~~~G~Ghs~~~~~~--~~g~~idl~~l~~i~~~d~~~~~v~v~aG~~l~~l~~~L 88 (419)
T TIGR01679 13 SAIVRPTDEGELADVIAQAA--KPVRAVGSGHSFTDLAC--TDGTMISLTGLQGVVDVDQPTGLATVEAGTRLGALGPQL 88 (419)
T ss_pred CeEECCCCHHHHHHHHHHhC--CCEEEEeCCCCCCCccc--CCCEEEEhhHcCCceeecCCCCEEEEcCCCCHHHHHHHH
Confidence 35789999999999887543 24788888866543211 115889988755443344446899999999999999876
Q ss_pred hh
Q psy7003 596 DR 597 (1520)
Q Consensus 596 ~~ 597 (1520)
..
T Consensus 89 ~~ 90 (419)
T TIGR01679 89 AQ 90 (419)
T ss_pred HH
Confidence 54
No 111
>TIGR01678 FAD_lactone_ox sugar 1,4-lactone oxidases. This model represents a family of at least two different sugar 1,4 lactone oxidases, both involved in synthesizing ascorbic acid or a derivative. These include L-gulonolactone oxidase (EC 1.1.3.8) from rat and D-arabinono-1,4-lactone oxidase (EC 1.1.3.37) from Saccharomyces cerevisiae. Members are proposed to have the cofactor FAD covalently bound at a site specified by Prosite motif PS00862; OX2_COVAL_FAD; 1.
Probab=70.14 E-value=7.2 Score=48.92 Aligned_cols=80 Identities=15% Similarity=0.221 Sum_probs=53.9
Q ss_pred cEEEEcCCHHHHHHHHhcCCC-CCCcEEEEecchhhhccCCCCCCeeeeCCCcccccceEEeCCeEEEccccCHHHHHHh
Q psy7003 516 GIWYIVTEVREIFEIFDGLEA-NQTYMLVGGNTGYGVYRPRVPVDVYIQIRDIKELRQIFTRNGYVLMGSATTLTEAMDY 594 (1520)
Q Consensus 516 ~~~~rPtSLeEal~ll~~~p~-~~~a~lVAGGTdLgv~~k~~~~~~lIdIs~I~EL~~I~~~~~~L~IGA~vTlsel~e~ 594 (1520)
...++|+|.+|+.++++...+ +...++++||++..-..- ....+||++++..+-.+..+...++++|++++.++.+.
T Consensus 16 ~~v~~P~s~eev~~iv~~A~~~~~~v~v~G~GhS~s~~~~--~~gvvIdl~~l~~i~~id~~~~~vtV~aG~~l~~L~~~ 93 (438)
T TIGR01678 16 EVYYQPTSVEEVREVLALAREQKKKVKVVGGGHSPSDIAC--TDGFLIHLDKMNKVLQFDKEKKQITVEAGIRLYQLHEQ 93 (438)
T ss_pred CEEEecCCHHHHHHHHHHHHHCCCeEEEECCCCCCCCCcc--CCeEEEEhhhcCCceEEcCCCCEEEEcCCCCHHHHHHH
Confidence 357999999999998863211 124777888855322110 11578998875544344444568999999999999987
Q ss_pred hhh
Q psy7003 595 FDR 597 (1520)
Q Consensus 595 L~~ 597 (1520)
|.+
T Consensus 94 L~~ 96 (438)
T TIGR01678 94 LDE 96 (438)
T ss_pred HHH
Confidence 654
No 112
>PTZ00490 Ferredoxin superfamily; Provisional
Probab=70.00 E-value=7.3 Score=41.74 Aligned_cols=65 Identities=28% Similarity=0.499 Sum_probs=43.7
Q ss_pred ccccccccccCCCcceEEEEC---CEEEEecccCCCCcchhHHHHhhhcccCcccccc-CCCccceeeeecc
Q psy7003 283 VPILLPRLFSDTSSTVRFTIN---GVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCR-EGGCGVCTVTVTS 350 (1520)
Q Consensus 283 ~p~~~~~l~~~~~~~~~f~~n---g~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~-~g~cGactV~v~~ 350 (1520)
.||+..+=+-.++..++++++ |+...+ ++++|.||++.|++..+. +-...|+ ++.||-|-|-|..
T Consensus 21 ~~~~~~~~~~~~~g~v~I~~~~~dG~~~~v--~~~~G~sLLeal~~~~~i-~i~~~CGG~g~CgtC~V~V~~ 89 (143)
T PTZ00490 21 GPLSTSRALYSTPGKVKVCVKKRDGTHCDV--EVPVGMSLMHALRDVAKL-DVEGTCNGCMQCATCHVYLSA 89 (143)
T ss_pred cceeeeeeeccCCCcEEEEEEcCCCCEEEE--EECCCccHHHHHHHcCCC-CccccCCCCCEeCCCEEEECC
Confidence 566655555555667777664 555665 678999999999985432 2222566 6789999888854
No 113
>KOG3049|consensus
Probab=66.95 E-value=2.2 Score=47.66 Aligned_cols=45 Identities=24% Similarity=0.525 Sum_probs=32.8
Q ss_pred CCCchHHHHH---hhcC-CCCCcCCCCCCCCCeeEEEECCccCCCCcccccccccchhh
Q psy7003 39 PGTRLVDFIR---DYAR-LKGTKYMCREGGCGVCTVTVTSSHPVTGVDSTYSVNACLVL 93 (1520)
Q Consensus 39 ~~~~l~~~lr---~~~~-l~g~k~~c~~g~cGactv~~~~~~~~~~~~~~~~v~scl~~ 93 (1520)
=|..+||.|- ++.. ---.+..|+||.||+|.+-|+|. ...+|+.-
T Consensus 75 CGpMvLDALiKIKnE~DptLTFRRSCREGICGSCAMNI~G~----------NtLACi~k 123 (288)
T KOG3049|consen 75 CGPMVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNINGT----------NTLACICK 123 (288)
T ss_pred cchHHHHHHHHhhcccCCceehhhhhhccccccceeccCCC----------ceeEEEEe
Confidence 4567888873 3322 22368899999999999999997 46777654
No 114
>TIGR00387 glcD glycolate oxidase, subunit GlcD. This protein, the glycolate oxidase GlcD subunit, is similar in sequence to that of several D-lactate dehydrogenases, including that of E. coli. The glycolate oxidase has been found to have some D-lactate dehydrogenase activity.
Probab=66.73 E-value=8.3 Score=47.89 Aligned_cols=79 Identities=9% Similarity=0.036 Sum_probs=51.2
Q ss_pred EEcCCHHHHHHHHhcCCC-CCCcEEEEecchhhhccCCCCCCeeeeCCCcccccceEEeCCeEEEccccCHHHHHHhhhh
Q psy7003 519 YIVTEVREIFEIFDGLEA-NQTYMLVGGNTGYGVYRPRVPVDVYIQIRDIKELRQIFTRNGYVLMGSATTLTEAMDYFDR 597 (1520)
Q Consensus 519 ~rPtSLeEal~ll~~~p~-~~~a~lVAGGTdLgv~~k~~~~~~lIdIs~I~EL~~I~~~~~~L~IGA~vTlsel~e~L~~ 597 (1520)
++|.|.+|+.++++...+ +-...+.+|||.+.-..-......+||+++...+-.+..++..++++|++++.++.+.+..
T Consensus 2 v~P~s~eev~~iv~~a~~~~i~v~~~G~Gt~~~g~~~~~~~~vvidl~~mn~i~~id~~~~~v~veaGv~~~~l~~~l~~ 81 (413)
T TIGR00387 2 VFPKNTEQVARILKLCHEHRIPIVPRGAGTGLSGGALPEEGGLVLVFKHMNKILEIDVVNLTAVVQPGVRNLELEQAVEE 81 (413)
T ss_pred CCCCCHHHHHHHHHHHHHcCCcEEEECCCCCCCCCccCCCCeEEEEhHHcCceeEEcCCCCEEEEcCCccHHHHHHHHHH
Confidence 468999999887762110 1247778999987422111112577887664433333334679999999999999987664
No 115
>TIGR02008 fdx_plant ferredoxin [2Fe-2S]. This model represents single domain 2Fe-2S (also called plant type) ferredoxins. In general, these occur as a single domain proteins or with a chloroplast transit peptide. Species tend to be photosynthetic, but several forms may occur in one species and individually may not be associated with photocynthesis. Halobacterial forms differ somewhat in architecture; they score between trusted and noise cutoffs. Sequences scoring below the noise cutoff tend to be ferredoxin-related domains of larger proteins.
Probab=66.59 E-value=7.3 Score=38.71 Aligned_cols=50 Identities=26% Similarity=0.516 Sum_probs=33.2
Q ss_pred ceEEE-ECCEEEEecccCCCCcchhHHHHhhhcccCccccccCCCccceeeeecc
Q psy7003 297 TVRFT-INGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTS 350 (1520)
Q Consensus 297 ~~~f~-~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~~g~cGactV~v~~ 350 (1520)
+++|. -+|....+ +++++.||++.|+.. |+. -...|.+|.||.|.+-+.+
T Consensus 4 ~v~~~~~~~~~~~~--~~~~g~tLLda~~~~-Gi~-i~~~C~~G~Cg~C~v~v~~ 54 (97)
T TIGR02008 4 KVTLVNPDGGEETI--ECPDDQYILDAAEEA-GID-LPYSCRAGACSTCAGKVEE 54 (97)
T ss_pred EEEEEECCCCEEEE--EECCCCcHHHHHHHc-CCC-CCcCCCCccCCCCceEEEe
Confidence 34442 25533333 457999999999753 432 2457999999999987743
No 116
>TIGR02416 CO_dehy_Mo_lg carbon-monoxide dehydrogenase, large subunit. This model represents the large subunits of group of carbon-monoxide dehydrogenases that include molybdenum as part of the enzymatic cofactor. There are various forms of carbon-monoxide dehydrogenase; Salicibacter pomeroyi DSS-3, for example, has two forms. Note that, at least in some species, the active site Cys is modified with a selenium attached to (rather than replacing) the sulfur atom. This is termed selanylcysteine, and created post-translationally, in contrast to selenocysteine incorporation during translation as for many other selenoproteins.
Probab=66.35 E-value=50 Score=44.60 Aligned_cols=123 Identities=16% Similarity=0.177 Sum_probs=72.0
Q ss_pred ceEEEEEEcC-CCeEEEEecCcccCcchHHHHHHHHHHHhCCCCCcEEEecCCCCCCCCCCCCcccccccchH-HHHHHH
Q psy7003 1317 SYAILSVFRR-DATVAITTSGIEIGQGLHTKVAQACAYELGIPIEKIVLKPAQNNIFPNAANTGGSTASDNAA-RCILLC 1394 (1520)
Q Consensus 1317 ~~a~v~v~~~-DGsV~i~~g~~e~GQG~~T~~aQiaA~~Lgip~e~I~v~~~dT~~~p~~~~t~gS~~t~~~g-~Av~~A 1394 (1520)
..++.. ++. ||.++|.++. |..+.. .+.+|+.||+|.++|+|.. |.-++.+|++.....- -++..|
T Consensus 192 ~~~iA~-~~~~~g~l~v~~st----Q~p~~~-r~~vA~~Lglp~~~VrV~~------~~vGGgFG~K~~~~~~~~~aa~~ 259 (770)
T TIGR02416 192 CGCVAS-MDPIKGELTLWGTF----QAPHVI-RTVVSLISGLPEHKIRVIS------PDIGGGFGNKVGIYPGYVCAIVA 259 (770)
T ss_pred CeEEEE-EeCCCCeEEEEECC----CcHHHH-HHHHHHHhCCCHHHEEEEc------CCCCCCcccccccccHHHHHHHH
Confidence 445554 454 6899999875 555544 7778899999999999985 4557888888765332 122233
Q ss_pred HHHHHHHhhhhhhcCCCHHHHHHHHhhcCceeEEEEEeeccCCCCCCCccccceEEEEEEEEECCCCcEEEEEEEEEEec
Q psy7003 1395 CQELKTRLMPYMDKGKSWEKTISDAFERGVDLQVTKSVSSQQTPDLLPMYTIPTAAATEVEVDLLTGQHQILRVDILEDT 1474 (1520)
Q Consensus 1395 c~~l~~rl~~~~~~~~~w~~~~~~a~~~gv~l~~~~~~~~~~~~~~~~~~~~~ga~~aEVEVD~~TG~v~V~r~~~~~D~ 1474 (1520)
+++++ +|++=. .+-++- +.... ....+-. -.++-+|. .|++.=.++.+..|.
T Consensus 260 A~~~g---RPVk~~-~sR~E~----------~~~~~------------~r~~~~~-~~k~g~d~-dG~i~a~~~~~~~d~ 311 (770)
T TIGR02416 260 SIVLG---VPVKWV-EDRMEN----------LSTTS------------FARDYHM-TGELAATK-DGKILAMRCNVLADH 311 (770)
T ss_pred HHHhC---CCEEEe-cchHHh----------hhcCC------------CCCceEE-EEEEEECC-CCcEEEEEEEEEeec
Confidence 33332 122100 000110 00000 0011112 22777884 599999999999999
Q ss_pred CcccC
Q psy7003 1475 GQSIN 1479 (1520)
Q Consensus 1475 G~~IN 1479 (1520)
|-..+
T Consensus 312 Gay~~ 316 (770)
T TIGR02416 312 GAFDA 316 (770)
T ss_pred cccCC
Confidence 96643
No 117
>TIGR00179 murB UDP-N-acetylenolpyruvoylglucosamine reductase. This model describes MurB, UDP-N-acetylenolpyruvoylglucosamine reductase, which is also called UDP-N-acetylmuramate dehydrogenase. It is part of the pathway for the biosynthesis of the UDP-N-acetylmuramoyl-pentapeptide that is a precursor of bacterial peptidoglycan.
Probab=65.68 E-value=18 Score=42.95 Aligned_cols=79 Identities=11% Similarity=0.199 Sum_probs=54.0
Q ss_pred cEEEEcCCHHHHHHHHhcCC-CCCCcEEEEecchhhhccCCCCCCeeeeCCCcccccceEEeCCeEEEccccCHHHHHHh
Q psy7003 516 GIWYIVTEVREIFEIFDGLE-ANQTYMLVGGNTGYGVYRPRVPVDVYIQIRDIKELRQIFTRNGYVLMGSATTLTEAMDY 594 (1520)
Q Consensus 516 ~~~~rPtSLeEal~ll~~~p-~~~~a~lVAGGTdLgv~~k~~~~~~lIdIs~I~EL~~I~~~~~~L~IGA~vTlsel~e~ 594 (1520)
..|+.|+|.+|+.++++-.. .+-...+++|||.+.+... .....+|++.+.... +...++.+++||++++.++.+.
T Consensus 14 ~~~v~p~s~edl~~~l~~a~~~~~p~~vlGgGSNll~~d~-~~~gvvi~l~~~~~~--~~~~~~~v~v~aG~~~~~l~~~ 90 (284)
T TIGR00179 14 RHIVCPESIEQLVNVLDNAKEEDQPLLILGEGSNLLILDD-GRGGVIINLGKGIDI--EDDEGEYVHVGGGENWHKLVKY 90 (284)
T ss_pred eEEEEeCCHHHHHHHHHHHHHcCCCEEEEecceEEEEccC-CcCeEEEECCCCceE--EEecCCEEEEEcCCcHHHHHHH
Confidence 45899999999998775211 0124889999999875432 222577887653222 2223468999999999999987
Q ss_pred hhh
Q psy7003 595 FDR 597 (1520)
Q Consensus 595 L~~ 597 (1520)
+.+
T Consensus 91 ~~~ 93 (284)
T TIGR00179 91 ALK 93 (284)
T ss_pred HHH
Confidence 654
No 118
>PRK11230 glycolate oxidase subunit GlcD; Provisional
Probab=65.51 E-value=15 Score=47.05 Aligned_cols=81 Identities=6% Similarity=0.010 Sum_probs=55.0
Q ss_pred EEEEcCCHHHHHHHHhcCCC-CCCcEEEEecchhhhccCCCCCCeeeeCCCcccccceEEeCCeEEEccccCHHHHHHhh
Q psy7003 517 IWYIVTEVREIFEIFDGLEA-NQTYMLVGGNTGYGVYRPRVPVDVYIQIRDIKELRQIFTRNGYVLMGSATTLTEAMDYF 595 (1520)
Q Consensus 517 ~~~rPtSLeEal~ll~~~p~-~~~a~lVAGGTdLgv~~k~~~~~~lIdIs~I~EL~~I~~~~~~L~IGA~vTlsel~e~L 595 (1520)
..++|.|.+|..++++...+ +-...+.+|||++.-..-......+||++++..+..+..++..++++|++++.++.+.+
T Consensus 58 ~Vv~P~s~eeV~~iv~~a~~~~ipv~~rG~Gt~~~gg~~~~~~gividl~~ln~I~~id~~~~~v~VeaGv~~~~L~~~l 137 (499)
T PRK11230 58 LVVLPKQMEQVQALLAVCHRLRVPVVARGAGTGLSGGALPLEKGVLLVMARFNRILDINPVGRRARVQPGVRNLAISQAA 137 (499)
T ss_pred EEEeeCCHHHHHHHHHHHHHcCCeEEEECCCcCcCCCcccCCCcEEEEcccCCCceEEcCCCCEEEEcCCccHHHHHHHH
Confidence 46889999999988762210 11355678888873221111125789998865554555566789999999999999876
Q ss_pred hh
Q psy7003 596 DR 597 (1520)
Q Consensus 596 ~~ 597 (1520)
..
T Consensus 138 ~~ 139 (499)
T PRK11230 138 AP 139 (499)
T ss_pred HH
Confidence 64
No 119
>PRK00046 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=65.38 E-value=13 Score=45.17 Aligned_cols=101 Identities=10% Similarity=0.100 Sum_probs=62.6
Q ss_pred cEEEEcCCHHHHHHHHhcCCC-CCCcEEEEecchhhhccCCCCCCeeeeCCCcccccceEE---eCC--eEEEccccCHH
Q psy7003 516 GIWYIVTEVREIFEIFDGLEA-NQTYMLVGGNTGYGVYRPRVPVDVYIQIRDIKELRQIFT---RNG--YVLMGSATTLT 589 (1520)
Q Consensus 516 ~~~~rPtSLeEal~ll~~~p~-~~~a~lVAGGTdLgv~~k~~~~~~lIdIs~I~EL~~I~~---~~~--~L~IGA~vTls 589 (1520)
..|+.|.|.+|+.++++.... +-...+++||+.+.+.- .....+|.+ + ++.++. +++ .+++||++.+.
T Consensus 22 ~~~~~p~~~~el~~~~~~~~~~~~p~~vlG~GSNlLv~D--~~~g~vI~~-~---~~~~~~~~~~~~~~~v~a~AG~~~~ 95 (334)
T PRK00046 22 RHLVEAESEEQLLEALADARAAGLPVLVLGGGSNVLFTE--DFDGTVLLN-R---IKGIEVLSEDDDAWYLHVGAGENWH 95 (334)
T ss_pred eEEEeeCCHHHHHHHHHHHHHcCCCEEEEeceEEEEECC--CCCEEEEEe-c---CCceEEEecCCCeEEEEEEcCCcHH
Confidence 458899999999998863210 12488899999987753 322556664 2 444444 333 69999999999
Q ss_pred HHHHhhhhccCCchhhhhHHHHHHHHHhhcchhHhccc
Q psy7003 590 EAMDYFDRTSKTDANFEYMRIMKDHLEQVAHYAVRNFA 627 (1520)
Q Consensus 590 el~e~L~~~~~~~~~~~~~~~La~al~~IAs~qIRN~A 627 (1520)
++.....+. .....+ .|+--=..+++-.+-|.|
T Consensus 96 ~l~~~~~~~--gl~GlE---~l~gIPGTVGGAv~mNaG 128 (334)
T PRK00046 96 DLVLWTLQQ--GMPGLE---NLALIPGTVGAAPIQNIG 128 (334)
T ss_pred HHHHHHHHc--CchhhH---HhcCCCcchhHHHHhcCC
Confidence 999866543 111112 222222345666666666
No 120
>PLN02805 D-lactate dehydrogenase [cytochrome]
Probab=64.49 E-value=15 Score=47.52 Aligned_cols=82 Identities=13% Similarity=0.139 Sum_probs=56.7
Q ss_pred EEEEcCCHHHHHHHHhcCCC-CCCcEEEEecchhhhccCCCCCCeeeeCCCcccccceEEeCCeEEEccccCHHHHHHhh
Q psy7003 517 IWYIVTEVREIFEIFDGLEA-NQTYMLVGGNTGYGVYRPRVPVDVYIQIRDIKELRQIFTRNGYVLMGSATTLTEAMDYF 595 (1520)
Q Consensus 517 ~~~rPtSLeEal~ll~~~p~-~~~a~lVAGGTdLgv~~k~~~~~~lIdIs~I~EL~~I~~~~~~L~IGA~vTlsel~e~L 595 (1520)
..++|.|.+|+.++++...+ +-.....+|||++.-..-...-..+||++++..+..+..++..++++|++++.++.+.+
T Consensus 136 ~Vv~P~s~eeV~~ivk~a~~~~ipv~prGgGts~~G~~~~~~ggivIdl~~mn~I~~id~~~~~vtVeaGv~~~~L~~~L 215 (555)
T PLN02805 136 VVVFPRSEEEVSKIVKSCNKYKVPIVPYGGATSIEGHTLAPHGGVCIDMSLMKSVKALHVEDMDVVVEPGIGWLELNEYL 215 (555)
T ss_pred EEEEcCCHHHHHHHHHHHHHCCCcEEEECCCCCCCCCccCCCCEEEEEccCCCCeEEEeCCCCEEEEeCCcCHHHHHHHH
Confidence 46889999999887762210 12366778999874221111125889998766555555667899999999999999877
Q ss_pred hhc
Q psy7003 596 DRT 598 (1520)
Q Consensus 596 ~~~ 598 (1520)
...
T Consensus 216 ~~~ 218 (555)
T PLN02805 216 EPY 218 (555)
T ss_pred HHc
Confidence 653
No 121
>PLN02465 L-galactono-1,4-lactone dehydrogenase
Probab=64.32 E-value=11 Score=48.76 Aligned_cols=81 Identities=6% Similarity=0.062 Sum_probs=53.5
Q ss_pred cEEEEcCCHHHHHHHHhcCC-CCCCcEEEEecchhhhccCCCCCCeeeeCCCcccccceEEeCCeEEEccccCHHHHHHh
Q psy7003 516 GIWYIVTEVREIFEIFDGLE-ANQTYMLVGGNTGYGVYRPRVPVDVYIQIRDIKELRQIFTRNGYVLMGSATTLTEAMDY 594 (1520)
Q Consensus 516 ~~~~rPtSLeEal~ll~~~p-~~~~a~lVAGGTdLgv~~k~~~~~~lIdIs~I~EL~~I~~~~~~L~IGA~vTlsel~e~ 594 (1520)
..+++|+|.+|+.++++... .+...+++++|.+..-... ....+||++++..+-.+..+...++++|++++.+|.+.
T Consensus 98 ~~vv~P~S~eEV~~iV~~A~~~g~~VrvvGsGhS~~~l~~--td~glIdL~~l~~Il~vD~e~~~VtV~AG~~l~~L~~~ 175 (573)
T PLN02465 98 RRYHQPESLEELEDIVKEAHEKGRRIRPVGSGLSPNGLAF--SREGMVNLALMDKVLEVDKEKKRVTVQAGARVQQVVEA 175 (573)
T ss_pred CEEEEeCCHHHHHHHHHHHHHcCCcEEEEcCCcCCCCeee--CCCEEEECcCCCCcEEEeCCCCEEEEccCCCHHHHHHH
Confidence 35799999999999886321 1134778888864322111 11357888775443333444468999999999999987
Q ss_pred hhhc
Q psy7003 595 FDRT 598 (1520)
Q Consensus 595 L~~~ 598 (1520)
+...
T Consensus 176 L~~~ 179 (573)
T PLN02465 176 LRPH 179 (573)
T ss_pred HHHc
Confidence 7653
No 122
>PRK12576 succinate dehydrogenase iron-sulfur subunit; Provisional
Probab=62.40 E-value=8.4 Score=45.56 Aligned_cols=40 Identities=18% Similarity=0.397 Sum_probs=31.6
Q ss_pred cCCCCcchhHHHHhhhccc----CccccccCCCccceeeeeccC
Q psy7003 312 EVPPGTRLVDFIRDYARLK----GTKYMCREGGCGVCTVTVTSS 351 (1520)
Q Consensus 312 ~~~~~~tll~~Lr~~~~l~----gtk~~C~~g~cGactV~v~~~ 351 (1520)
++++++||++.|+...... ..+.+|..|-||+|+|.|...
T Consensus 30 ~~~~~~tvLd~L~~i~~~~d~tl~~~~~C~~G~CgsC~v~ING~ 73 (279)
T PRK12576 30 KVDRFTQVTEALRRIKEEQDPTLSYRASCHMAVCGSCGMKINGE 73 (279)
T ss_pred ecCCCCHHHHHHHHhCCccCCCceecCCCCCCCCCCCEEEECCc
Confidence 5789999999999953222 337889999999999999543
No 123
>COG0277 GlcD FAD/FMN-containing dehydrogenases [Energy production and conversion]
Probab=62.24 E-value=11 Score=46.90 Aligned_cols=80 Identities=14% Similarity=0.113 Sum_probs=58.3
Q ss_pred EEEEcCCHHHHHHHHhcCCCC-CCcEEEEecchhhhccCCCCCCeeeeCCCcccccceEEeCCeEEEccccCHHHHHHhh
Q psy7003 517 IWYIVTEVREIFEIFDGLEAN-QTYMLVGGNTGYGVYRPRVPVDVYIQIRDIKELRQIFTRNGYVLMGSATTLTEAMDYF 595 (1520)
Q Consensus 517 ~~~rPtSLeEal~ll~~~p~~-~~a~lVAGGTdLgv~~k~~~~~~lIdIs~I~EL~~I~~~~~~L~IGA~vTlsel~e~L 595 (1520)
.+..|.|.+|..++++...++ -.....+|||++.-...... .++||++++..+..+..++..+++.+++++.++.+.+
T Consensus 34 ~v~~p~s~~eV~~iv~~a~~~~~~v~prG~gts~~g~~~~~~-gvvl~l~~mn~i~~id~~~~~~~v~aGv~l~~l~~~l 112 (459)
T COG0277 34 AVVFPKSEEEVAAILRLANENGIPVVPRGGGTSLSGGAVPDG-GVVLDLSRLNRILEIDPEDGTATVQAGVTLEDLEKAL 112 (459)
T ss_pred EEEccCCHHHHHHHHHHHHHcCCeEEEECCCCCccccccCCC-cEEEEchhhcchhccCcCCCEEEEcCCccHHHHHHHH
Confidence 578999999999988742211 12566789999865432112 7899999865555555568899999999999999866
Q ss_pred hh
Q psy7003 596 DR 597 (1520)
Q Consensus 596 ~~ 597 (1520)
+.
T Consensus 113 ~~ 114 (459)
T COG0277 113 AP 114 (459)
T ss_pred HH
Confidence 54
No 124
>CHL00134 petF ferredoxin; Validated
Probab=62.07 E-value=13 Score=37.22 Aligned_cols=44 Identities=27% Similarity=0.622 Sum_probs=31.6
Q ss_pred CCEEEEecccCCCCcchhHHHHhhhcccCccccccCCCccceeeeecc
Q psy7003 303 NGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTS 350 (1520)
Q Consensus 303 ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~~g~cGactV~v~~ 350 (1520)
.|..+.+ +.+++.|||+.+++. |+ .-...|.+|.||.|-+-+.+
T Consensus 13 ~~~~~~~--~~~~~~tLL~a~~~~-Gi-~i~~~C~~G~Cg~C~v~v~~ 56 (99)
T CHL00134 13 EGIDVTI--DCPDDVYILDAAEEQ-GI-DLPYSCRAGACSTCAGKVTE 56 (99)
T ss_pred CCCeEEE--EECCCCcHHHHHHHc-CC-CCCcCCCCccCCCCEEEEEe
Confidence 5554444 567899999999863 33 33447999999999887743
No 125
>PRK14648 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=61.41 E-value=18 Score=44.17 Aligned_cols=81 Identities=10% Similarity=0.210 Sum_probs=52.9
Q ss_pred cEEEEcCCHHHHHHHHhcCCC-CCCcEEEEecchhhhccCCCCCCeeeeCCCcccccceE-EeC-CeEEEccccCHHHHH
Q psy7003 516 GIWYIVTEVREIFEIFDGLEA-NQTYMLVGGNTGYGVYRPRVPVDVYIQIRDIKELRQIF-TRN-GYVLMGSATTLTEAM 592 (1520)
Q Consensus 516 ~~~~rPtSLeEal~ll~~~p~-~~~a~lVAGGTdLgv~~k~~~~~~lIdIs~I~EL~~I~-~~~-~~L~IGA~vTlsel~ 592 (1520)
..|+.|.|.+|+.++++.... .-...+++||+.+.+.-+ +....+|.+.++.++.... .++ ..|++||++.+.++.
T Consensus 31 ~~~~~p~s~~el~~~l~~~~~~~~p~~iLG~GSNlL~~D~-g~~G~VI~l~~~~~i~i~~~~~~~~~v~agAG~~~~~Lv 109 (354)
T PRK14648 31 QFWAEPRSCTQLRALIEEAQRARIPLSLIGGGSNVLIADE-GVPGLMLSLRRFRSLHTQTQRDGSVLVHAGAGLPVAALL 109 (354)
T ss_pred EEEEeeCCHHHHHHHHHHHHHcCCCEEEEeceeEEEEeCC-CccEEEEEeCCcCceEEeeccCCcEEEEEEeCCcHHHHH
Confidence 458999999999998862210 124778999998866432 2225677764444432110 132 369999999999998
Q ss_pred Hhhhh
Q psy7003 593 DYFDR 597 (1520)
Q Consensus 593 e~L~~ 597 (1520)
....+
T Consensus 110 ~~~~~ 114 (354)
T PRK14648 110 AFCAH 114 (354)
T ss_pred HHHHH
Confidence 76554
No 126
>TIGR01677 pln_FAD_oxido plant-specific FAD-dependent oxidoreductase. This model represents an uncharacterized plant-specific family of FAD-dependent oxidoreductases. At least seven distinct members are found in Arabidopsis thaliana. The family shows considerable sequence similarity to three different enzymes of ascorbic acid biosynthesis: L-galactono-1,4-lactone dehydrogenase (EC 1.3.2.3) from higher plants, D-arabinono-1,4-lactone oxidase (EC 1.1.3.37 from Saccharomyces cerevisiae, and L-gulonolactone oxidase (EC 1.1.3.8) from mouse, as well as to a bacterial sorbitol oxidase. The class of compound acted on by members of this family is unknown.
Probab=60.55 E-value=18 Score=46.85 Aligned_cols=81 Identities=10% Similarity=0.020 Sum_probs=51.0
Q ss_pred EEEEcCCHHHHHHHHhcCCC-CCCcEEEEe-cchhhhccCCCC-C-CeeeeCCCcccccceEEeCCeEEEccccCHHHHH
Q psy7003 517 IWYIVTEVREIFEIFDGLEA-NQTYMLVGG-NTGYGVYRPRVP-V-DVYIQIRDIKELRQIFTRNGYVLMGSATTLTEAM 592 (1520)
Q Consensus 517 ~~~rPtSLeEal~ll~~~p~-~~~a~lVAG-GTdLgv~~k~~~-~-~~lIdIs~I~EL~~I~~~~~~L~IGA~vTlsel~ 592 (1520)
..++|+|.+|+.++++...+ +...++++| |..+.-...... . ..+||++++..+-.|..+...++++|++++.+|.
T Consensus 34 ~vv~P~s~eeV~~iV~~A~~~g~~v~v~GG~gHs~~~~a~t~~~~ggvvIdL~~Ln~il~iD~~~~tVtV~AG~~l~~L~ 113 (557)
T TIGR01677 34 NVAYPKTEAELVSVVAAATAAGRKMKVVTRYSHSIPKLACPDGSDGALLISTKRLNHVVAVDATAMTVTVESGMSLRELI 113 (557)
T ss_pred EEEecCCHHHHHHHHHHHHHCCCeEEEEeCCCCCcCcccccCCCCCEEEEEcccCCCCEEEeCCCCEEEECCCCcHHHHH
Confidence 47899999999998863221 123555544 322211111111 1 3799998855444444455689999999999999
Q ss_pred Hhhhh
Q psy7003 593 DYFDR 597 (1520)
Q Consensus 593 e~L~~ 597 (1520)
+.|.+
T Consensus 114 ~~L~~ 118 (557)
T TIGR01677 114 VEAEK 118 (557)
T ss_pred HHHHH
Confidence 87765
No 127
>PRK13903 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=60.44 E-value=26 Score=43.05 Aligned_cols=77 Identities=12% Similarity=0.168 Sum_probs=54.0
Q ss_pred cEEEEcCCHHHHHHHHhcCC-CCCCcEEEEecchhhhccCCCCCCeeeeCCCcccccceEEe--CCeEEEccccCHHHHH
Q psy7003 516 GIWYIVTEVREIFEIFDGLE-ANQTYMLVGGNTGYGVYRPRVPVDVYIQIRDIKELRQIFTR--NGYVLMGSATTLTEAM 592 (1520)
Q Consensus 516 ~~~~rPtSLeEal~ll~~~p-~~~~a~lVAGGTdLgv~~k~~~~~~lIdIs~I~EL~~I~~~--~~~L~IGA~vTlsel~ 592 (1520)
..|+.|.|.+|+.++++... .+-...+++||+.+.+.- .+....+|+++. +.++.+ ++.+++||++.+.++.
T Consensus 34 ~~~~~p~s~edl~~~l~~a~~~~~p~~vlGgGSNlLv~D-~g~~GvVI~l~~----~~i~i~~~~~~v~vgAG~~~~~l~ 108 (363)
T PRK13903 34 RRLVTCTSTEELVAAVRELDAAGEPLLVLGGGSNLVIAD-DGFDGTVVRVAT----RGVTVDCGGGLVRAEAGAVWDDVV 108 (363)
T ss_pred eEEEEeCCHHHHHHHHHHHHHCCCCEEEEeCCeeEeECC-CCccEEEEEeCC----CcEEEeCCCCEEEEEcCCCHHHHH
Confidence 35789999999998875211 012488999999986432 122257788752 555555 6789999999999999
Q ss_pred Hhhhh
Q psy7003 593 DYFDR 597 (1520)
Q Consensus 593 e~L~~ 597 (1520)
....+
T Consensus 109 ~~a~~ 113 (363)
T PRK13903 109 ARTVE 113 (363)
T ss_pred HHHHH
Confidence 86554
No 128
>PF13085 Fer2_3: 2Fe-2S iron-sulfur cluster binding domain; PDB: 3P4Q_N 1KFY_N 3CIR_N 3P4R_B 2B76_N 1KF6_B 3P4P_N 3P4S_B 1L0V_B 1ZOY_B ....
Probab=59.84 E-value=11 Score=38.79 Aligned_cols=40 Identities=28% Similarity=0.675 Sum_probs=28.4
Q ss_pred cCCCCcchhHHHHhhhcc-cCc---cccccCCCccceeeeeccC
Q psy7003 312 EVPPGTRLVDFIRDYARL-KGT---KYMCREGGCGVCTVTVTSS 351 (1520)
Q Consensus 312 ~~~~~~tll~~Lr~~~~l-~gt---k~~C~~g~cGactV~v~~~ 351 (1520)
+.++++|+|+.|..-... -++ ...|..|-||.|.+.|...
T Consensus 24 ~~~~~~tVLd~L~~Ik~~~D~sLafr~sCr~giCGsCam~ING~ 67 (110)
T PF13085_consen 24 PVEPGMTVLDALNYIKEEQDPSLAFRYSCRSGICGSCAMRINGR 67 (110)
T ss_dssp EGGSTSBHHHHHHHHHHHT-TT--B--SSSSSSSSTTEEEETTE
T ss_pred cCCCCCcHHHHHHHHHhccCCCeEEEecCCCCCCCCCEEEECCc
Confidence 456899999998874333 222 4689999999999999543
No 129
>PRK07569 bidirectional hydrogenase complex protein HoxU; Validated
Probab=58.62 E-value=16 Score=42.10 Aligned_cols=49 Identities=20% Similarity=0.360 Sum_probs=36.2
Q ss_pred ceEEEECCEEEEecccCCCCcchhHHHHhh----hcccCccccccCCCccceeeeec
Q psy7003 297 TVRFTINGVVYIIGAEVPPGTRLVDFIRDY----ARLKGTKYMCREGGCGVCTVTVT 349 (1520)
Q Consensus 297 ~~~f~~ng~~~~~~~~~~~~~tll~~Lr~~----~~l~gtk~~C~~g~cGactV~v~ 349 (1520)
+++|++||..+.. ++|.||++.++.. -.+...+..|..|.||.|-|.|.
T Consensus 3 ~v~i~idg~~~~~----~~g~til~a~~~~gi~ip~~C~~~~~~~~G~C~~C~V~v~ 55 (234)
T PRK07569 3 VKTLTIDDQLVSA----REGETLLEAAREAGIPIPTLCHLDGLSDVGACRLCLVEIE 55 (234)
T ss_pred eEEEEECCEEEEe----CCCCHHHHHHHHcCCCCCcCcCCCCCCCCCccCCcEEEEC
Confidence 6899999998655 6899999999863 11122233455899999999984
No 130
>PRK12385 fumarate reductase iron-sulfur subunit; Provisional
Probab=58.06 E-value=9.8 Score=44.16 Aligned_cols=39 Identities=26% Similarity=0.485 Sum_probs=29.9
Q ss_pred cCCCCcchhHHHHhhh-cc--c-CccccccCCCccceeeeecc
Q psy7003 312 EVPPGTRLVDFIRDYA-RL--K-GTKYMCREGGCGVCTVTVTS 350 (1520)
Q Consensus 312 ~~~~~~tll~~Lr~~~-~l--~-gtk~~C~~g~cGactV~v~~ 350 (1520)
++++++|+++.|.... .+ + +-+.+|..|-||+|+|.|..
T Consensus 30 ~~~~~~tvl~~L~~ik~~~d~~l~fr~~C~~giCGsC~v~InG 72 (244)
T PRK12385 30 PYDETTSLLDALGYIKDNLAPDLSYRWSCRMAICGSCGMMVNN 72 (244)
T ss_pred eCCCCCcHHHHHHHHHHhcCCCceeccCCCCCcCCCCcceECc
Confidence 4678999999997643 22 2 33568999999999999964
No 131
>PF02738 Ald_Xan_dh_C2: Molybdopterin-binding domain of aldehyde dehydrogenase; InterPro: IPR008274 Aldehyde oxidase (1.2.3.1 from EC) catalyses the conversion of an aldehyde in the presence of oxygen and water to an acid and hydrogen peroxide. The enzyme is a homodimer, and requires FAD, molybdenum and two 2FE-2S clusters as cofactors. Xanthine dehydrogenase (1.1.1.204 from EC) catalyses the hydrogenation of xanthine to urate, and also requires FAD, molybdenum and two 2FE-2S clusters as cofactors. This activity is often found in a bifunctional enzyme with xanthine oxidase (1.1.3.22 from EC) activity too. The enzyme can be converted from the dehydrogenase form to the oxidase form irreversibly by proteolysis or reversibly through oxidation of sulphydryl groups.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3NVZ_C 3NVY_C 1FO4_B 3NRZ_L 3AM9_A 3B9J_C 3AX7_B 3NVW_L 3BDJ_A 3ETR_N ....
Probab=54.80 E-value=56 Score=42.17 Aligned_cols=124 Identities=22% Similarity=0.228 Sum_probs=66.2
Q ss_pred cceEEEEEEcCCCeEEEEecCcccCcchHHHHHHHHHHHhCCCCCcEEEecCCCCCCCCCCCCccccc-ccchHHHHHHH
Q psy7003 1316 VSYAILSVFRRDATVAITTSGIEIGQGLHTKVAQACAYELGIPIEKIVLKPAQNNIFPNAANTGGSTA-SDNAARCILLC 1394 (1520)
Q Consensus 1316 ~~~a~v~v~~~DGsV~i~~g~~e~GQG~~T~~aQiaA~~Lgip~e~I~v~~~dT~~~p~~~~t~gS~~-t~~~g~Av~~A 1394 (1520)
...++.. ++.||.++|.++..- . ..+...+|+.||||.++|+|.. |..++..|++. .....-.+..+
T Consensus 50 p~~~~A~-~~~~g~l~v~~~tQ~----p-~~~r~~va~~lglp~~~V~V~~------~~~GGgFG~~~~~~~~~~~aa~~ 117 (547)
T PF02738_consen 50 PHGAVAW-WDEDGRLTVWSSTQW----P-FHVRRAVAEALGLPPEKVRVIS------PYVGGGFGKKKQDSPIAVLAALA 117 (547)
T ss_dssp -SEEEEE-EETTTEEEEEES-SS----H-HHHHHHHHHHHTS-GGGEEEEE------SB-S--TTTTSSTHHHHHHHHHH
T ss_pred CCeEEEE-EccCCCEEEEECCcC----H-hHHHHHHhhhhcCChhHEEEee------eecCCCCCCccccchHHHHHHHH
Confidence 3456666 457999999997743 2 4567888999999999999985 44566666332 22233333333
Q ss_pred HHHHHHHhhhhhhcCCCH--HHHHHHHhhcCceeEEEEEeeccCCCCCCCccccceEEEEEEEEECCCCcEEEEEEEEEE
Q psy7003 1395 CQELKTRLMPYMDKGKSW--EKTISDAFERGVDLQVTKSVSSQQTPDLLPMYTIPTAAATEVEVDLLTGQHQILRVDILE 1472 (1520)
Q Consensus 1395 c~~l~~rl~~~~~~~~~w--~~~~~~a~~~gv~l~~~~~~~~~~~~~~~~~~~~~ga~~aEVEVD~~TG~v~V~r~~~~~ 1472 (1520)
++.+. +|++ ..| +|-.... .+-....+-.++-+| ..|++.=.++.+..
T Consensus 118 a~~~g---rPVk---~~~tR~e~~~~~-----------------------~~r~~~~~~~~~g~~-~dG~i~a~~~~~~~ 167 (547)
T PF02738_consen 118 AKKTG---RPVK---LVWTREEDFRAG-----------------------PKRPPTRIRVRAGAD-KDGKITALDHDIYA 167 (547)
T ss_dssp HHHHS---SEEE---EE--HHHHHHHS------------------------BB-EEEEEEEEEE--TTS-EEEEEEEEEE
T ss_pred HhccC---ceEE---EEechHHhcCCC-----------------------CCccHHHhhhhheEC-CCCCEEEeeeeeec
Confidence 33332 1211 111 1111000 000112334466677 47999999999999
Q ss_pred ecCcccChH
Q psy7003 1473 DTGQSINPA 1481 (1520)
Q Consensus 1473 D~G~~INP~ 1481 (1520)
|.|-.-+..
T Consensus 168 d~Ga~~~~~ 176 (547)
T PF02738_consen 168 DGGAYASFS 176 (547)
T ss_dssp EEESS-TTH
T ss_pred cCCcccccc
Confidence 999775543
No 132
>PRK10713 2Fe-2S ferredoxin YfaE; Provisional
Probab=54.78 E-value=12 Score=36.37 Aligned_cols=47 Identities=26% Similarity=0.580 Sum_probs=30.2
Q ss_pred eEEEECCEEEEecccCCCCcchhHHHHhhhcccCccccccCCCccceeeeec
Q psy7003 298 VRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVT 349 (1520)
Q Consensus 298 ~~f~~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~~g~cGactV~v~ 349 (1520)
++|..+|..+.+. +.+.|||+.|++ +|+ .-...|.+|.||.|.+-+.
T Consensus 4 v~~~~~~~~~~~~---~~~~tlL~a~~~-~gi-~~p~~Cr~G~Cg~C~~~~~ 50 (84)
T PRK10713 4 VTLRITGTQLLCQ---DEHPSLLAALES-HNV-AVEYQCREGYCGSCRTRLV 50 (84)
T ss_pred EEEEeCCcEEEec---CCCCcHHHHHHH-cCC-CCCCCCCCeECCCCEeEEE
Confidence 3454455444331 245899999885 333 3345899999999987653
No 133
>TIGR02965 xanthine_xdhB xanthine dehydrogenase, molybdopterin binding subunit. Members of the protein family are the molybdopterin-containing large subunit (or, in, eukaryotes, the molybdopterin-binding domain) of xanthine dehydrogenase, and enzyme that reduces the purine pool by catabolizing xanthine to urate. This model is based primarily on bacterial sequences; it does not manage to include all eukaryotic xanthine dehydrogenases and thereby discriminate them from the closely related enzyme aldehyde dehydrogenase.
Probab=52.63 E-value=19 Score=48.42 Aligned_cols=58 Identities=17% Similarity=0.139 Sum_probs=43.1
Q ss_pred CCCeeEEEEeCC-eEEEEeCCCCh-----HHHHHHHHHHhCCCCCcEEEEe------cccCCCCCCCCCC
Q psy7003 971 EGQTALCVPSED-GVDIYAASQWV-----TLVQESVAGVLGLPNNRVNVKT------RRIGGGYGAKLSR 1028 (1520)
Q Consensus 971 Ep~~a~A~~~ed-~l~V~~sTQ~p-----~~vq~~vA~~LGlp~~kVrV~~------~~vGGgFG~K~~~ 1028 (1520)
.+..+......| .++|+++++.. +.+.+.+|+.||+|.++|+|.. +.-+|.+|++...
T Consensus 446 ~~~~a~v~i~~dG~v~v~~g~~e~GQG~~T~laQIaAe~LGi~~d~V~v~~~DT~~~p~~~gT~gSr~t~ 515 (758)
T TIGR02965 446 NQAGALVHVYTDGSIHLNHGGTEMGQGLNTKVAQVVAEEFQVDIDRVKITATDTDKVPNTSATAASSGSD 515 (758)
T ss_pred CccceEEEEeCCCcEEEEECCCCCCCCHHHHHHHHHHHHhCCCHHHEEEEecCccCCCCCCCCchHHHHH
Confidence 344555655544 59999998664 4567888999999999999984 4557778887653
No 134
>PRK14649 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=52.53 E-value=44 Score=39.96 Aligned_cols=79 Identities=10% Similarity=0.055 Sum_probs=53.3
Q ss_pred cEEEEcCCHHHHHHHHhcCCC-CCCcEEEEecchhhhccCCCCCCeeeeCCCcccccceEEeCC--eEEEccccCHHHHH
Q psy7003 516 GIWYIVTEVREIFEIFDGLEA-NQTYMLVGGNTGYGVYRPRVPVDVYIQIRDIKELRQIFTRNG--YVLMGSATTLTEAM 592 (1520)
Q Consensus 516 ~~~~rPtSLeEal~ll~~~p~-~~~a~lVAGGTdLgv~~k~~~~~~lIdIs~I~EL~~I~~~~~--~L~IGA~vTlsel~ 592 (1520)
..|+.|+|.+|+.++++-... +-...+++||+.+.+... .....+|+++.. .+ .+..+++ .+++||++++.++.
T Consensus 22 ~~~v~p~~~~dl~~~l~~~~~~~ip~~vlG~GSNlL~~d~-g~~GvVI~l~~~-~~-~i~~~~~~~~v~v~AG~~~~~l~ 98 (295)
T PRK14649 22 RYFVEPTTPDEAIAAAAWAEQRQLPLFWLGGGSNLLVRDE-GFDGLVARYRGQ-RW-ELHEHGDTAEVWVEAGAPMAGTA 98 (295)
T ss_pred eEEEEcCCHHHHHHHHHHHHHCCCCEEEEecceeEEEeCC-CcCeEEEEecCC-Cc-EEEEeCCcEEEEEEcCCcHHHHH
Confidence 457889999999988752110 124888999998866432 122577887542 23 3444444 79999999999999
Q ss_pred Hhhhh
Q psy7003 593 DYFDR 597 (1520)
Q Consensus 593 e~L~~ 597 (1520)
..+.+
T Consensus 99 ~~~~~ 103 (295)
T PRK14649 99 RRLAA 103 (295)
T ss_pred HHHHH
Confidence 86554
No 135
>COG2871 NqrF Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF [Energy production and conversion]
Probab=50.89 E-value=12 Score=44.09 Aligned_cols=53 Identities=26% Similarity=0.490 Sum_probs=38.8
Q ss_pred ceEEEEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCC-CCCCeeEEEECC
Q psy7003 19 SSTVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCRE-GGCGVCTVTVTS 74 (1520)
Q Consensus 19 ~~~~~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~-g~cGactv~~~~ 74 (1520)
.-.+++.|||.+-. ...++++.+||..|-+. |+. ....|+. |.||-|.|.|..
T Consensus 34 ~gd~ti~IN~d~e~-~~t~~aG~kLL~~L~~~-gif-i~SaCGGggsC~QCkv~v~~ 87 (410)
T COG2871 34 VGDITIKINGDPEK-TKTVPAGGKLLGALASS-GIF-ISSACGGGGSCGQCKVRVKK 87 (410)
T ss_pred cCceEEEeCCChhh-ceecCCchhHHHHHHhC-Ccc-cccCCCCCccccccEEEEec
Confidence 34589999994322 22689999999999875 554 3456765 779999999854
No 136
>TIGR03196 pucD xanthine dehydrogenase D subunit. This gene has been characterized in B. subtilis as the molybdopterin binding-subunit of xanthine dehydrogenase (pucD), acting in conjunction with pucC, the FAD-binding subunit and pucE, the FeS-binding subunit. The more common XDH complex (GenProp0640) includes the xdhB gene which is related to pucD. It appears that most of the relatives of pucD outside of this narrow clade are involved in other processes as they are found in unrelated genomic contexts, contain the more common XDH complex and/or do not appear to process purines to allantoin.
Probab=48.34 E-value=32 Score=46.35 Aligned_cols=55 Identities=15% Similarity=0.161 Sum_probs=41.1
Q ss_pred eeEEEEeCCe---EEEEeCCCCh-----HHHHHHHHHHhCCCCCcEEEEe------cccCCCCCCCCCC
Q psy7003 974 TALCVPSEDG---VDIYAASQWV-----TLVQESVAGVLGLPNNRVNVKT------RRIGGGYGAKLSR 1028 (1520)
Q Consensus 974 ~a~A~~~ed~---l~V~~sTQ~p-----~~vq~~vA~~LGlp~~kVrV~~------~~vGGgFG~K~~~ 1028 (1520)
.+.+....|| ++|+++++.. +.+.+.+|+.||+|.++|+|.. +.-+|.+|++.+.
T Consensus 467 ~a~v~l~~dGsv~v~v~~g~~d~GQG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~gt~~Sr~t~ 535 (768)
T TIGR03196 467 GARLELAEDGTVKIRAHFACAECGQGFLAAAEQIAMEELGCAAEDISIAIADTAKGPKAGSSSASRGTS 535 (768)
T ss_pred cEEEEEeCCCCeEEEEEECCCCcCCCHHHHHHHHHHHHhCCCHHHEEEecCCCCCCCCCCCCchhhhhH
Confidence 4555555444 8999877554 4567888999999999999985 4457888888764
No 137
>PRK12814 putative NADPH-dependent glutamate synthase small subunit; Provisional
Probab=46.94 E-value=27 Score=46.13 Aligned_cols=50 Identities=24% Similarity=0.445 Sum_probs=37.3
Q ss_pred cceEEEECCEEEEecccCCCCcchhHHHHhhhccc-----CccccccCCCccceeeeecc
Q psy7003 296 STVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLK-----GTKYMCREGGCGVCTVTVTS 350 (1520)
Q Consensus 296 ~~~~f~~ng~~~~~~~~~~~~~tll~~Lr~~~~l~-----gtk~~C~~g~cGactV~v~~ 350 (1520)
++++|++||..+.. ++|+|+++.|+.. |.. .....|..|.|+.|.|.|..
T Consensus 2 ~~v~~~idg~~~~~----~~g~ti~~a~~~~-g~~ip~~c~~~~~~~~g~C~~C~V~v~g 56 (652)
T PRK12814 2 NTISLTINGRSVTA----APGTSILEAAASA-GITIPTLCFHQELEATGSCWMCIVEIKG 56 (652)
T ss_pred CeEEEEECCEEEEe----CCcCcHHHHHHHc-CCccccccCCCCCCCccccceeEEEECC
Confidence 36899999998765 6899999999974 333 22233457899999999843
No 138
>PRK06259 succinate dehydrogenase/fumarate reductase iron-sulfur subunit; Provisional
Probab=45.12 E-value=22 Score=45.12 Aligned_cols=38 Identities=29% Similarity=0.640 Sum_probs=30.5
Q ss_pred cCCCCcchhHHHHhhhcccCc----cccccCCCccceeeeec
Q psy7003 312 EVPPGTRLVDFIRDYARLKGT----KYMCREGGCGVCTVTVT 349 (1520)
Q Consensus 312 ~~~~~~tll~~Lr~~~~l~gt----k~~C~~g~cGactV~v~ 349 (1520)
++++++|+++.|+.....++. +..|..|.||+|+|.|.
T Consensus 26 ~~~~~~tvl~al~~~~~~~~~~l~~~~~C~~g~Cg~C~v~v~ 67 (486)
T PRK06259 26 PVKEGMTVLDALEYINKTYDANIAFRSSCRAGQCGSCAVTIN 67 (486)
T ss_pred eCCCCChHHHHHHHhchhcCCCceecCCCCCCCCCCCEEEEC
Confidence 567999999999986554333 56899999999999873
No 139
>PF02594 DUF167: Uncharacterised ACR, YggU family COG1872; InterPro: IPR003746 This entry describes proteins of unknown function. Structures for two of these proteins, YggU from Escherichia coli and MTH637 from the archaea Methanobacterium thermoautotrophicum, have been determined; they have a core 2-layer alpha/beta structure consisting of beta(2)-loop-alpha-beta(2)-alpha [, ].; PDB: 1YH5_A 1N91_A 1JRM_A.
Probab=41.88 E-value=66 Score=31.12 Aligned_cols=52 Identities=19% Similarity=0.298 Sum_probs=39.7
Q ss_pred eEEEEEEcCCCeEEEEecCcccCcchHHHHHHHHHHHhCCCCCcEEEecCCCC
Q psy7003 1318 YAILSVFRRDATVAITTSGIEIGQGLHTKVAQACAYELGIPIEKIVLKPAQNN 1370 (1520)
Q Consensus 1318 ~a~v~v~~~DGsV~i~~g~~e~GQG~~T~~aQiaA~~Lgip~e~I~v~~~dT~ 1370 (1520)
..+..+ +.||.+.|...+....-=.+..+....|+.||+|..+|.+..+.|.
T Consensus 17 ~~i~~~-~~~~~l~i~v~app~~GkAN~ali~~La~~l~v~ks~i~i~~G~~S 68 (77)
T PF02594_consen 17 NAIVGV-EGDGALKIRVTAPPVDGKANKALIRFLAKALGVPKSDIEIVSGHTS 68 (77)
T ss_dssp -EEEEE--TTT-EEEEBSTTCCCCCHHHHHHHHHHHHCT--TTCEEECC-CCC
T ss_pred cccccc-cCceEEEEEEecCCCcChhHHHHHHHHHHHhCCCcccEEEEecCCC
Confidence 344454 3458999999999988889999999999999999999999998775
No 140
>PRK11183 D-lactate dehydrogenase; Provisional
Probab=41.82 E-value=36 Score=43.82 Aligned_cols=79 Identities=15% Similarity=0.145 Sum_probs=54.1
Q ss_pred EEEEcCCHHHHHHHHh---cCCCCCCcEEEEecchhhhc-cCCC----CCCeeeeCCCcccccceEEeCCeEEEccccCH
Q psy7003 517 IWYIVTEVREIFEIFD---GLEANQTYMLVGGNTGYGVY-RPRV----PVDVYIQIRDIKELRQIFTRNGYVLMGSATTL 588 (1520)
Q Consensus 517 ~~~rPtSLeEal~ll~---~~p~~~~a~lVAGGTdLgv~-~k~~----~~~~lIdIs~I~EL~~I~~~~~~L~IGA~vTl 588 (1520)
-...|.|.+|..++++ ++. -....-+|||+|--- .-.. +..++||+.++..+..|. ++..+++.+++++
T Consensus 41 AVV~P~SteEVa~IVklC~e~~--vPVIPRGgGTGLtGGAvP~~~~~dR~gVVIsl~RMNrIleID-~~~~VvVePGVtl 117 (564)
T PRK11183 41 AVVFPGTLLELWRVLQACVAAD--KIIIMQAANTGLTGGSTPNGNDYDRDIVIISTLRLDKIQLLN-NGKQVLALPGTTL 117 (564)
T ss_pred EEEecCCHHHHHHHHHHHHHcC--CeEEEeCCCcccccCcccCCCCCcCCEEEEEhhHcCCcEEEC-CCCeEEEeCCCcH
Confidence 4689999999998877 332 124445899987321 1111 125788988766555555 4568999999999
Q ss_pred HHHHHhhhhc
Q psy7003 589 TEAMDYFDRT 598 (1520)
Q Consensus 589 sel~e~L~~~ 598 (1520)
.++.+.++..
T Consensus 118 ~~LeeaLk~~ 127 (564)
T PRK11183 118 YQLEKALKPL 127 (564)
T ss_pred HHHHHHHHHh
Confidence 9999977653
No 141
>PLN03136 Ferredoxin; Provisional
Probab=40.36 E-value=36 Score=36.79 Aligned_cols=36 Identities=25% Similarity=0.558 Sum_probs=27.8
Q ss_pred cCCCCcchhHHHHhhhcccCccccccCCCccceeeeec
Q psy7003 312 EVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVT 349 (1520)
Q Consensus 312 ~~~~~~tll~~Lr~~~~l~gtk~~C~~g~cGactV~v~ 349 (1520)
+++++.+|||.+++. |+. -...|.+|.||.|-+-+.
T Consensus 69 ~~~~g~tILdAa~~~-Gi~-lp~sCr~G~CGtC~~~l~ 104 (148)
T PLN03136 69 ECEEDVYVLDAAEEA-GID-LPYSCRAGSCSSCAGKVV 104 (148)
T ss_pred EeCCCCcHHHHHHHc-CCC-CCcCCCCccCCCCEEEEe
Confidence 567999999999864 332 345799999999987763
No 142
>PRK10684 HCP oxidoreductase, NADH-dependent; Provisional
Probab=40.26 E-value=41 Score=40.49 Aligned_cols=49 Identities=27% Similarity=0.487 Sum_probs=32.7
Q ss_pred ceEEEECCEEEEecccCCCCcchhHHHHhhhcccCccccccCCCccceeeeec
Q psy7003 297 TVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVT 349 (1520)
Q Consensus 297 ~~~f~~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~~g~cGactV~v~ 349 (1520)
.+++.+++....+ .++++.|||+.|++ +|+ .-...|.+|.||.|.+-+.
T Consensus 248 ~~~v~~~~~~~~~--~~~~~~~lL~~~~~-~gi-~~~~~C~~G~Cg~C~~~~~ 296 (332)
T PRK10684 248 GLTFTKLQPAREF--YAPVGTTLLEALES-NKV-PVVAACRAGVCGCCKTKVV 296 (332)
T ss_pred ceEEEEecCCEEE--EeCCCChHHHHHHH-cCC-CccCCCCCcCCCCCEEEEe
Confidence 4444444333333 35789999999964 443 3455799999999987764
No 143
>PRK00054 dihydroorotate dehydrogenase electron transfer subunit; Reviewed
Probab=39.61 E-value=12 Score=43.04 Aligned_cols=19 Identities=26% Similarity=0.833 Sum_probs=16.4
Q ss_pred cCCCCCCCCCeeEEEECCc
Q psy7003 57 KYMCREGGCGVCTVTVTSS 75 (1520)
Q Consensus 57 k~~c~~g~cGactv~~~~~ 75 (1520)
...|+.|.||+|.|.+++.
T Consensus 214 ~m~cg~G~C~~C~~~~~~~ 232 (250)
T PRK00054 214 RMKCGIGACGACVCDTETG 232 (250)
T ss_pred cccCcCcccCcCCcccCCC
Confidence 3579999999999998874
No 144
>PTZ00038 ferredoxin; Provisional
Probab=39.19 E-value=40 Score=37.93 Aligned_cols=50 Identities=18% Similarity=0.393 Sum_probs=32.7
Q ss_pred cceEEEECCEEEEecccCCCCcchhHHHHhhhcccCccccccCCCccceeeeec
Q psy7003 296 STVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVT 349 (1520)
Q Consensus 296 ~~~~f~~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~~g~cGactV~v~ 349 (1520)
..++|.+......+ +++++.||++.+++. |+ .-...|..|.||.|-+-+.
T Consensus 96 ~~Vt~~~~~g~~~~--~v~~geTILdAae~a-GI-~lp~sCr~G~CGtCkvrV~ 145 (191)
T PTZ00038 96 YNITLQTPDGEKVI--ECDEDEYILDAAERQ-GV-ELPYSCRGGSCSTCAAKLL 145 (191)
T ss_pred EEEEEEeCCCcEEE--EeCCCCcHHHHHHHc-CC-CCCcCCCCccCCCCEeEEe
Confidence 34566533222223 467899999999853 33 3345799999999987663
No 145
>PRK05713 hypothetical protein; Provisional
Probab=38.45 E-value=38 Score=40.41 Aligned_cols=46 Identities=26% Similarity=0.604 Sum_probs=33.9
Q ss_pred ceEEEECCEEEEecccCCCCcchhHHHHhhhcccCccccccCCCccceeeee
Q psy7003 297 TVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTV 348 (1520)
Q Consensus 297 ~~~f~~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~~g~cGactV~v 348 (1520)
|.+|..+|..+.+ +++.|||+.++. .|+.- ...|.+|.||.|-+.+
T Consensus 1 ~~~~~~~~~~~~~----~~g~tlL~a~~~-~gi~~-~~~C~~G~Cg~C~~~~ 46 (312)
T PRK05713 1 MPELRVGERRWSV----PAGSNLLDALNA-AGVAV-PYSCRAGSCHACLVRC 46 (312)
T ss_pred CCcEecCCeEEEE----CCCCcHHHHHHH-cCCCC-CcCCCCcCCCCCeEEE
Confidence 4567778876544 689999999886 33322 3469999999999877
No 146
>PRK08053 sulfur carrier protein ThiS; Provisional
Probab=38.21 E-value=64 Score=29.82 Aligned_cols=38 Identities=5% Similarity=0.096 Sum_probs=28.3
Q ss_pred EEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEECCc
Q psy7003 23 RFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTSS 75 (1520)
Q Consensus 23 ~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~~~~ 75 (1520)
.++|||+++.+ +.++||.++|.. +++.. . .|.|.+|+.
T Consensus 2 ~i~vNg~~~~~----~~~~tl~~ll~~-l~~~~--~--------~vaVavN~~ 39 (66)
T PRK08053 2 QILFNDQPMQC----AAGQTVHELLEQ-LNQLQ--P--------GAALAINQQ 39 (66)
T ss_pred EEEECCeEEEc----CCCCCHHHHHHH-cCCCC--C--------cEEEEECCE
Confidence 57999999876 467899999964 56542 1 178999985
No 147
>cd06192 DHOD_e_trans_like FAD/NAD binding domain (electron transfer subunit) of dihydroorotate dehydrogenase-like proteins. Dihydroorotate dehydrogenases (DHODs) catalyze the only redox reaction in pyrimidine de novo biosynthesis. They catalyze the oxidation of (S)-dihydroorotate to orotate coupled with the reduction of NAD+. In L. lactis, DHOD B (encoded by pyrDa) is co-expressed with pyrK and both gene products are required for full activity, as well as NAD binding. NAD(P) binding domain of ferredoxin reductase-like proteins catalyze electron transfer between an NAD(P)-binding domain of the alpha/beta class and a discrete (usually N-terminal) domain which vary in orientation with respect to the NAD(P) binding domain. The N-terminal domain may contain a flavin prosthetic group (as in flavoenzymes) or use flavin as a substrate. Ferredoxin is reduced in the final stage of photosystem I. The flavoprotein Ferredoxin-NADP+ reductase transfers electrons from reduced ferredoxin to FAD (formi
Probab=36.39 E-value=21 Score=40.77 Aligned_cols=19 Identities=32% Similarity=0.786 Sum_probs=15.7
Q ss_pred CcCCCCCCCCCeeEEEECC
Q psy7003 56 TKYMCREGGCGVCTVTVTS 74 (1520)
Q Consensus 56 ~k~~c~~g~cGactv~~~~ 74 (1520)
.+-.|+.|.||+|+|...+
T Consensus 212 ~~m~Cg~G~C~~C~~~~~~ 230 (243)
T cd06192 212 SPMCCGIGICGACTIETKH 230 (243)
T ss_pred ccccCccccccceEEEeCC
Confidence 3567999999999998654
No 148
>TIGR01941 nqrF NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit. This model represents the NqrF subunit of the six-protein, Na(+)-pumping NADH-quinone reductase of a number of marine and pathogenic Gram-negative bacteria. This oxidoreductase complex functions primarily as a sodium ion pump.
Probab=34.93 E-value=41 Score=41.71 Aligned_cols=53 Identities=28% Similarity=0.522 Sum_probs=36.8
Q ss_pred CCcceEEEECC-EEEEecccCCCCcchhHHHHhhhcccCccccccC-CCccceeeeecc
Q psy7003 294 TSSTVRFTING-VVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCRE-GGCGVCTVTVTS 350 (1520)
Q Consensus 294 ~~~~~~f~~ng-~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~~-g~cGactV~v~~ 350 (1520)
+.+.+++.+|+ +...+ +++++.||++.+++. |+. -...|+. |.||.|-|-+.+
T Consensus 28 ~~~~v~v~~~~~~~~~~--~~~~g~tlL~a~~~~-gi~-i~~~C~g~G~Cg~C~v~v~~ 82 (405)
T TIGR01941 28 SSGDITIGINDDEEKSI--TVPAGGKLLNTLASN-GIF-ISSACGGGGTCGQCRVRVVE 82 (405)
T ss_pred ccccEEEEEcCCCceEE--EECCCChHHHHHHHc-CCC-CcccCCCccEeCCCEEEEcc
Confidence 45668999885 33444 567899999999864 332 2346885 789999887743
No 149
>TIGR02160 PA_CoA_Oxy5 phenylacetate-CoA oxygenase/reductase, PaaK subunit. Phenylacetate-CoA oxygenase is comprised of a five gene complex responsible for the hydroxylation of phenylacetate-CoA (PA-CoA) as the second catabolic step in phenylacetic acid (PA) degradation. Although the exact function of this enzyme has not been determined, it has been shown to be required for phenylacetic acid degradation and has been proposed to function in a multicomponent oxygenase acting on phenylacetate-CoA.
Probab=34.41 E-value=62 Score=39.17 Aligned_cols=54 Identities=24% Similarity=0.443 Sum_probs=38.4
Q ss_pred CCcceEEEECCEEEEecccCCCCcchhHHHHhhhcccCccccccCCCccceeeeecc
Q psy7003 294 TSSTVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTS 350 (1520)
Q Consensus 294 ~~~~~~f~~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~~g~cGactV~v~~ 350 (1520)
....++|...|..... ..++++.|||+.+.. +|+ .-...|..|.||.|-+-+.+
T Consensus 261 ~~~~v~~~~~~~~~~~-~~~~~~~slL~~~~~-~gi-~~~~~C~~G~Cg~C~~~~~~ 314 (352)
T TIGR02160 261 DVSKVTVTLDGRSTET-SSLSRDESVLDAALR-ARP-DLPFACKGGVCGTCRAKVLE 314 (352)
T ss_pred CceEEEEEECCceEEE-EecCCCCcHHHHHHH-cCC-CCcCCCCCccCCCCEEEEec
Confidence 3456788887776532 246789999999964 443 33457999999999877643
No 150
>PRK05464 Na(+)-translocating NADH-quinone reductase subunit F; Provisional
Probab=34.07 E-value=43 Score=41.60 Aligned_cols=52 Identities=33% Similarity=0.575 Sum_probs=36.8
Q ss_pred CCcceEEEECCE-EEEecccCCCCcchhHHHHhhhcccCcccccc-CCCccceeeeec
Q psy7003 294 TSSTVRFTINGV-VYIIGAEVPPGTRLVDFIRDYARLKGTKYMCR-EGGCGVCTVTVT 349 (1520)
Q Consensus 294 ~~~~~~f~~ng~-~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~-~g~cGactV~v~ 349 (1520)
++..++++++|. ...+ ++++|.||++.++. +|+. -...|. +|.||.|-|-+.
T Consensus 32 ~~~~~~i~~~~~~~~~~--~~~~g~tLL~a~~~-~gi~-i~~~C~g~G~CgtC~v~v~ 85 (409)
T PRK05464 32 PSGDVTIKINGDPEKTI--TVPAGGKLLGALAS-NGIF-LSSACGGGGSCGQCRVKVK 85 (409)
T ss_pred cCccEEEEEcCCCcEEE--EECCCchHHHHHHH-cCCC-cccCCCCccEeCCCEEEEe
Confidence 567888889873 3333 46789999999885 3333 233688 499999987764
No 151
>COG2104 ThiS Sulfur transfer protein involved in thiamine biosynthesis [Coenzyme metabolism]
Probab=33.99 E-value=97 Score=29.35 Aligned_cols=41 Identities=22% Similarity=0.305 Sum_probs=31.7
Q ss_pred eEEEEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEECCc
Q psy7003 20 STVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTSS 75 (1520)
Q Consensus 20 ~~~~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~~~~ 75 (1520)
|.+++.+||+.+++ +.++|+.|+|++ +++.. --+.|.+||.
T Consensus 1 ~~m~i~~ng~~~e~----~~~~tv~dLL~~-l~~~~----------~~vav~vNg~ 41 (68)
T COG2104 1 MPMTIQLNGKEVEI----AEGTTVADLLAQ-LGLNP----------EGVAVAVNGE 41 (68)
T ss_pred CcEEEEECCEEEEc----CCCCcHHHHHHH-hCCCC----------ceEEEEECCE
Confidence 45788999998876 355999999986 57775 3468888885
No 152
>PLN02593 adrenodoxin-like ferredoxin protein
Probab=33.86 E-value=49 Score=34.26 Aligned_cols=47 Identities=23% Similarity=0.501 Sum_probs=33.2
Q ss_pred eEEE-ECCEEEEecccCCCCcchhHHHHhhhcccCccccccC-CCccceeeee
Q psy7003 298 VRFT-INGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCRE-GGCGVCTVTV 348 (1520)
Q Consensus 298 ~~f~-~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~~-g~cGactV~v 348 (1520)
++|. ..|+...+ ++++|.||++.+++ +++. -...|+. +.||.|-|.|
T Consensus 3 V~fi~~~G~~~~v--~~~~G~tLl~a~~~-~gi~-i~~~CgG~g~C~tC~V~V 51 (117)
T PLN02593 3 VTFVDKDGEERTV--KAPVGMSLLEAAHE-NDIE-LEGACEGSLACSTCHVIV 51 (117)
T ss_pred EEEEcCCCCEEEE--EECCCCcHHHHHHH-cCCC-CCccCCCcceeCCCEEEE
Confidence 5563 56766666 45789999999987 3442 3346874 8899998887
No 153
>PRK11872 antC anthranilate dioxygenase reductase; Provisional
Probab=32.94 E-value=52 Score=39.81 Aligned_cols=43 Identities=26% Similarity=0.458 Sum_probs=31.1
Q ss_pred CCEEEEecccCCCCcchhHHHHhhhcccCccccccCCCccceeeeec
Q psy7003 303 NGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVT 349 (1520)
Q Consensus 303 ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~~g~cGactV~v~ 349 (1520)
||....+ +++++.|||+.+++ .|+. -...|.+|.||.|-+-+.
T Consensus 11 ~~~~~~~--~~~~g~tlL~a~~~-~g~~-~p~~C~~G~Cg~C~~~~~ 53 (340)
T PRK11872 11 DGKTLFF--PVGKDELLLDAALR-NGIN-LPLDCREGVCGTCQGRCE 53 (340)
T ss_pred CCcEEEE--EeCCCCcHHHHHHH-cCCC-CcCCCCCeECCCCEEEEE
Confidence 6665444 45789999999885 3332 244699999999998763
No 154
>PLN02441 cytokinin dehydrogenase
Probab=32.23 E-value=96 Score=40.11 Aligned_cols=79 Identities=11% Similarity=0.099 Sum_probs=52.1
Q ss_pred EEEEcCCHHHHHHHHhcCC-C--CCCcEEEEecchhhhccCCCCCCeeeeCCCccc------ccceEEeCCeEEEccccC
Q psy7003 517 IWYIVTEVREIFEIFDGLE-A--NQTYMLVGGNTGYGVYRPRVPVDVYIQIRDIKE------LRQIFTRNGYVLMGSATT 587 (1520)
Q Consensus 517 ~~~rPtSLeEal~ll~~~p-~--~~~a~lVAGGTdLgv~~k~~~~~~lIdIs~I~E------L~~I~~~~~~L~IGA~vT 587 (1520)
..+.|+|.+|+.++++... . .-..+..+||+++.-.... .-..+||++++.. ...+..+...+++||+++
T Consensus 67 aVv~P~S~eDVa~iVr~A~~~~~~~~V~~rGgGHS~~G~a~~-~~GivIdms~Ln~i~~~~~ii~vd~~~~~VtV~aG~~ 145 (525)
T PLN02441 67 AVLYPSSVEDIASLVRAAYGSSSPLTVAARGHGHSLNGQAQA-PGGVVVDMRSLRGGVRGPPVIVVSGDGPYVDVSGGEL 145 (525)
T ss_pred EEEeCCCHHHHHHHHHHHhhccCCceEEEECCCcCCCCCccC-CCeEEEECCCCCCcCccCceEEEcCCCCEEEEcCCCC
Confidence 4689999999999877431 0 1124566788776532211 1268999988665 222333456899999999
Q ss_pred HHHHHHhhh
Q psy7003 588 LTEAMDYFD 596 (1520)
Q Consensus 588 lsel~e~L~ 596 (1520)
+.++.+.+.
T Consensus 146 ~~dv~~~l~ 154 (525)
T PLN02441 146 WIDVLKATL 154 (525)
T ss_pred HHHHHHHHH
Confidence 999887443
No 155
>PRK07440 hypothetical protein; Provisional
Probab=31.39 E-value=62 Score=30.55 Aligned_cols=40 Identities=18% Similarity=0.340 Sum_probs=29.4
Q ss_pred EEEEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEECCc
Q psy7003 21 TVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTSS 75 (1520)
Q Consensus 21 ~~~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~~~~ 75 (1520)
.+.++|||+++.+ +.++||.++|++ +++.. -...|.+|+.
T Consensus 4 ~m~i~vNG~~~~~----~~~~tl~~lL~~-l~~~~----------~~vav~~N~~ 43 (70)
T PRK07440 4 PITLQVNGETRTC----SSGTSLPDLLQQ-LGFNP----------RLVAVEYNGE 43 (70)
T ss_pred ceEEEECCEEEEc----CCCCCHHHHHHH-cCCCC----------CeEEEEECCE
Confidence 4789999998765 468999999975 46532 2357777774
No 156
>PF03450 CO_deh_flav_C: CO dehydrogenase flavoprotein C-terminal domain; InterPro: IPR005107 Proteins containing this domain form structural complexes with other known families, such as IPR008274 from INTERPRO and IPR001041 from INTERPRO]. The carbon monoxide (CO) dehydrogenase of Oligotropha carboxidovorans is a heterotrimeric complex composed of a apoflavoprotein, a molybdoprotein, and an iron-sulphur protein. It can be dissociated with sodium dodecylsulphate []. CO dehydrogenase catalyzes the oxidation of CO according to the following equation []: CO + H2O = CO2 + 2e + 2H+ Subunit S represents the iron-sulphur protein of CO dehydrogenase and is clearly divided into a C- and an N-terminal domain, each binding a [2Fe-2S] cluster [].; PDB: 3EUB_K 3NS1_K 3NVV_B 1FO4_B 3AM9_A 3AX7_B 3BDJ_A 3ETR_B 3UNI_A 3AMZ_A ....
Probab=31.33 E-value=29 Score=34.60 Aligned_cols=18 Identities=28% Similarity=0.379 Sum_probs=14.9
Q ss_pred cccccCCCCCCcHHHHHHH
Q psy7003 684 EAEYVNDLPQLSEEYFASV 702 (1520)
Q Consensus 684 El~p~~d~P~gS~EYRrKF 702 (1520)
++.|.+| .++|++||+..
T Consensus 74 ~~~~~~d-~r~s~~YR~~l 91 (103)
T PF03450_consen 74 EIDPISD-MRASAEYRRHL 91 (103)
T ss_dssp HTHHCTT-TTBTHHHHHHH
T ss_pred cCCCCCC-CCCCHHHHHHH
Confidence 7788888 59999999943
No 157
>PRK14651 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=30.74 E-value=1.4e+02 Score=35.65 Aligned_cols=72 Identities=17% Similarity=0.212 Sum_probs=49.1
Q ss_pred ccEEEEcCCHHHHHHHHhcCCCCCCcEEEEecchhhhccCCCCCCeeeeCCCcccccceEEeCCeEEEccccCHHHHHHh
Q psy7003 515 EGIWYIVTEVREIFEIFDGLEANQTYMLVGGNTGYGVYRPRVPVDVYIQIRDIKELRQIFTRNGYVLMGSATTLTEAMDY 594 (1520)
Q Consensus 515 ~~~~~rPtSLeEal~ll~~~p~~~~a~lVAGGTdLgv~~k~~~~~~lIdIs~I~EL~~I~~~~~~L~IGA~vTlsel~e~ 594 (1520)
...|+.|.|.+|+.+++. .| ..+++||+-+.+.-+ +....+|.+++ .+..++.+ + +.||++.+.++...
T Consensus 20 ~A~~~~p~~~~~l~~~~~-~p----~~vlG~GSNlL~~D~-g~~g~vI~l~~--~~~~~~~~-~--~a~AG~~~~~l~~~ 88 (273)
T PRK14651 20 PAELWTVETHEQLAEATE-AP----YRVLGGGSNLLVSDA-GVPERVIRLGG--EFAEWDLD-G--WVGGGVPLPGLVRR 88 (273)
T ss_pred eEEEEecCCHHHHHHHHC-CC----eEEEeceeEEEEcCC-CcceEEEEECC--cceeEeEC-C--EEECCCcHHHHHHH
Confidence 334444999999999883 44 889999999876432 11245666543 24445443 2 69999999999886
Q ss_pred hhh
Q psy7003 595 FDR 597 (1520)
Q Consensus 595 L~~ 597 (1520)
..+
T Consensus 89 ~~~ 91 (273)
T PRK14651 89 AAR 91 (273)
T ss_pred HHH
Confidence 554
No 158
>PRK06083 sulfur carrier protein ThiS; Provisional
Probab=30.55 E-value=73 Score=31.32 Aligned_cols=48 Identities=13% Similarity=0.155 Sum_probs=33.9
Q ss_pred CCCCCCceEEEEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEECCc
Q psy7003 13 RLFSDTSSTVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTSS 75 (1520)
Q Consensus 13 ~~~~~~~~~~~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~~~~ 75 (1520)
+-...+++.+.++|||+.+.+ +.+.||.++|.. +++.. -.+.|.+|+.
T Consensus 10 ~~~~~~~~~m~I~VNG~~~~~----~~~~tl~~LL~~-l~~~~----------~~vAVevNg~ 57 (84)
T PRK06083 10 TTEGAAMVLITISINDQSIQV----DISSSLAQIIAQ-LSLPE----------LGCVFAINNQ 57 (84)
T ss_pred eccCCCCceEEEEECCeEEEc----CCCCcHHHHHHH-cCCCC----------ceEEEEECCE
Confidence 333444566889999998876 467899999975 45532 2358888884
No 159
>PRK13552 frdB fumarate reductase iron-sulfur subunit; Provisional
Probab=30.02 E-value=63 Score=37.54 Aligned_cols=40 Identities=25% Similarity=0.607 Sum_probs=31.1
Q ss_pred cCCCCcchhHHHHhhhcc-cCc---cccccCCCccceeeeeccC
Q psy7003 312 EVPPGTRLVDFIRDYARL-KGT---KYMCREGGCGVCTVTVTSS 351 (1520)
Q Consensus 312 ~~~~~~tll~~Lr~~~~l-~gt---k~~C~~g~cGactV~v~~~ 351 (1520)
+.++++|+|+.|..-... -+| ...|..|-||.|++.|...
T Consensus 29 ~~~~~~tvLdaL~~Ik~~~D~sL~fr~sCr~giCGsCam~ING~ 72 (239)
T PRK13552 29 EETPGMTLFIALNRIREEQDPSLQFDFVCRAGICGSCAMVINGR 72 (239)
T ss_pred cCCCCCCHHHHHHHHHhcCCCCeeEeccCCCCCCCCceeEECCe
Confidence 457899999999986543 333 4579999999999999554
No 160
>PRK08364 sulfur carrier protein ThiS; Provisional
Probab=28.99 E-value=1.3e+02 Score=28.24 Aligned_cols=41 Identities=20% Similarity=0.300 Sum_probs=31.0
Q ss_pred EEEEECCE--EEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEECCc
Q psy7003 22 VRFTINGV--VYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTSS 75 (1520)
Q Consensus 22 ~~~~ing~--~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~~~~ 75 (1520)
+++.+||+ ...+ ++++++|+.+.|+. +++.. -.+.|.+|+.
T Consensus 5 m~v~vng~~~~~~~--~~~~~~tv~~ll~~-l~~~~----------~~v~v~vNg~ 47 (70)
T PRK08364 5 IRVKVIGRGIEKEI--EWRKGMKVADILRA-VGFNT----------ESAIAKVNGK 47 (70)
T ss_pred EEEEEeccccceEE--EcCCCCcHHHHHHH-cCCCC----------ccEEEEECCE
Confidence 78899999 4445 56788999999964 56642 2379999996
No 161
>COG0812 MurB UDP-N-acetylmuramate dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=28.17 E-value=1.4e+02 Score=35.94 Aligned_cols=103 Identities=13% Similarity=0.174 Sum_probs=61.5
Q ss_pred cEEEEcCCHHHHHHHHhcCC-CCCCcEEEEecchhhhccCCCCCCeeeeCCCcccccceEE--eCCeEEEccccCHHHHH
Q psy7003 516 GIWYIVTEVREIFEIFDGLE-ANQTYMLVGGNTGYGVYRPRVPVDVYIQIRDIKELRQIFT--RNGYVLMGSATTLTEAM 592 (1520)
Q Consensus 516 ~~~~rPtSLeEal~ll~~~p-~~~~a~lVAGGTdLgv~~k~~~~~~lIdIs~I~EL~~I~~--~~~~L~IGA~vTlsel~ 592 (1520)
..|+.|.+.+|+.++++... .+-...+++||+.+.+.-.. ...++|.+.. +..+.. +++.|++||++.+.++.
T Consensus 22 ~~~~~~~~~e~l~~~~~~~~~~~~p~~ilG~GSNlLv~d~g-~~gvvi~~~~---~~~~~~~~~~~~i~a~aG~~~~~l~ 97 (291)
T COG0812 22 EVLVEPRDIEELKAALKYAKAEDLPVLILGGGSNLLVRDGG-IGGVVIKLGK---LNFIEIEGDDGLIEAGAGAPWHDLV 97 (291)
T ss_pred eEEEecCCHHHHHHHHHhhhhcCCCEEEEecCceEEEecCC-CceEEEEccc---ccceeeeccCCeEEEccCCcHHHHH
Confidence 56899999999988886433 12358888999887665332 1134444332 223333 33499999999999998
Q ss_pred HhhhhccCCchhhhhHHHHHHHHHhhcchhHhccc
Q psy7003 593 DYFDRTSKTDANFEYMRIMKDHLEQVAHYAVRNFA 627 (1520)
Q Consensus 593 e~L~~~~~~~~~~~~~~~La~al~~IAs~qIRN~A 627 (1520)
....+.. ....+.+..+ =..+++-.+-|.|
T Consensus 98 ~~~~~~g--l~GlE~l~gI---PGsvGgav~mNaG 127 (291)
T COG0812 98 RFALENG--LSGLEFLAGI---PGSVGGAVIMNAG 127 (291)
T ss_pred HHHHHcC--CcchhhhcCC---CcccchhhhccCc
Confidence 8665431 1111211111 2345666666766
No 162
>PRK11282 glcE glycolate oxidase FAD binding subunit; Provisional
Probab=28.04 E-value=1.2e+02 Score=37.44 Aligned_cols=69 Identities=12% Similarity=-0.008 Sum_probs=43.8
Q ss_pred HHHHHHHhcCCCCCCcEEEEecchhhhccCCCCCCeeeeCCCcccccceEEeCCeEEEccccCHHHHHHhhhh
Q psy7003 525 REIFEIFDGLEANQTYMLVGGNTGYGVYRPRVPVDVYIQIRDIKELRQIFTRNGYVLMGSATTLTEAMDYFDR 597 (1520)
Q Consensus 525 eEal~ll~~~p~~~~a~lVAGGTdLgv~~k~~~~~~lIdIs~I~EL~~I~~~~~~L~IGA~vTlsel~e~L~~ 597 (1520)
.++++...++. -..++.+|||....-.- ....+||++++..+-.+..++..++++|++++.++.+.+.+
T Consensus 8 ~~~v~~A~~~~--~~v~~~GgGt~~~~g~~--~~~~vldl~~ln~Ile~d~~~~~vtV~AG~~l~el~~~L~~ 76 (352)
T PRK11282 8 LERVRQAAADG--TPLRIRGGGSKDFYGRA--LAGEVLDTRAHRGIVSYDPTELVITARAGTPLAELEAALAE 76 (352)
T ss_pred HHHHHHHHHCC--CeEEEECCCCCCCCCCC--CCCeEEEcccCCCcEEEcCCCCEEEECCCCCHHHHHHHHHH
Confidence 33444333443 24777888875321111 11458998876555444555678999999999999987765
No 163
>TIGR02007 fdx_isc ferredoxin, 2Fe-2S type, ISC system. This family consists of proteobacterial ferredoxins associated with and essential to the ISC system of 2Fe-2S cluster assembly. This family is closely related to (but excludes) eukaryotic (mitochondrial) adrenodoxins, which are ferredoxins involved in electron transfer to P450 cytochromes.
Probab=27.37 E-value=44 Score=34.06 Aligned_cols=36 Identities=25% Similarity=0.577 Sum_probs=26.1
Q ss_pred cCCCCcchhHHHHhhhcccCcccccc-CCCccceeeeec
Q psy7003 312 EVPPGTRLVDFIRDYARLKGTKYMCR-EGGCGVCTVTVT 349 (1520)
Q Consensus 312 ~~~~~~tll~~Lr~~~~l~gtk~~C~-~g~cGactV~v~ 349 (1520)
++++++||++.+++. ++. -...|+ .|.||.|-|-|.
T Consensus 19 ~~~~g~tLL~a~~~~-gi~-i~~~CgG~G~CgtC~v~V~ 55 (110)
T TIGR02007 19 EAKPGETILDVALDN-GIE-IEHACEKSCACTTCHCIVR 55 (110)
T ss_pred EECCCChHHHHHHHc-CCC-ccccCCCCceeCCCEEEEe
Confidence 457899999999763 333 334798 589999977663
No 164
>cd06219 DHOD_e_trans_like1 FAD/NAD binding domain in the electron transfer subunit of dihydroorotate dehydrogenase-like proteins. Dihydroorotate dehydrogenases (DHODs) catalyze the only redox reaction in pyrimidine de novo biosynthesis. They catalyze the oxidation of (S)-dihydroorotate to orotate coupled with the reduction of NAD+. In L. lactis, DHOD B (encoded by pyrDa) is co-expressed with pyrK and both gene products are required for full activity, as well as NAD binding. NAD(P) binding domain of ferredoxin reductase-like proteins catalyze electron transfer between an NAD(P)-binding domain of the alpha/beta class and a discrete (usually N-terminal) domain which vary in orientation with respect to the NAD(P) binding domain. The N-terminal domain may contain a flavin prosthetic group, as in flavoenzymes, or use flavin as a substrate. Ferredoxin is reduced in the final stage of photosystem I. The flavoprotein Ferredoxin-NADP+ reductase transfers electrons from reduced ferredoxin to FAD,
Probab=27.12 E-value=35 Score=39.25 Aligned_cols=19 Identities=37% Similarity=0.637 Sum_probs=16.3
Q ss_pred CcCCCCCCCCCeeEEEECC
Q psy7003 56 TKYMCREGGCGVCTVTVTS 74 (1520)
Q Consensus 56 ~k~~c~~g~cGactv~~~~ 74 (1520)
.+.+|+.|.||.|+|..+|
T Consensus 212 ~~m~Cg~G~C~~C~~~~~~ 230 (248)
T cd06219 212 PIMVDGTGMCGACRVTVGG 230 (248)
T ss_pred ccccCccceeeeEEEEeCC
Confidence 4678999999999998765
No 165
>TIGR02911 sulfite_red_B sulfite reductase, subunit B. Members of this protein family include the B subunit, one of three subunits, of the anaerobic sulfite reductase of Salmonella, and close homologs from various Clostridum species, where the three-gene neighborhood is preserved. Two such gene clusters are found in Clostridium perfringens, but it may be that these sets of genes correspond to the distinct assimilatory and dissimilatory forms as seen in Clostridium pasteurianum.
Probab=27.11 E-value=25 Score=40.98 Aligned_cols=17 Identities=35% Similarity=0.901 Sum_probs=14.8
Q ss_pred CCcCCCCCCCCCeeEEE
Q psy7003 55 GTKYMCREGGCGVCTVT 71 (1520)
Q Consensus 55 g~k~~c~~g~cGactv~ 71 (1520)
..+-.|+.|-||+|+|.
T Consensus 224 ~~~m~cg~g~c~~c~~~ 240 (261)
T TIGR02911 224 ERKMCCGVGKCGHCKID 240 (261)
T ss_pred ccceeccCcCCCCcccC
Confidence 46778999999999985
No 166
>PRK07860 NADH dehydrogenase subunit G; Validated
Probab=26.92 E-value=86 Score=42.54 Aligned_cols=51 Identities=27% Similarity=0.437 Sum_probs=39.0
Q ss_pred CcceEEEECCEEEEecccCCCCcchhHHHHhh----hcccCccccccCCCccceeeeec
Q psy7003 295 SSTVRFTINGVVYIIGAEVPPGTRLVDFIRDY----ARLKGTKYMCREGGCGVCTVTVT 349 (1520)
Q Consensus 295 ~~~~~f~~ng~~~~~~~~~~~~~tll~~Lr~~----~~l~gtk~~C~~g~cGactV~v~ 349 (1520)
..+++|++||+.+++ ++|+|+++..+.. -++...+..+..|.|.-|.|.|.
T Consensus 2 ~~~v~~~idg~~~~~----~~g~til~aa~~~gi~ip~~C~~~~l~~~g~Cr~C~Vev~ 56 (797)
T PRK07860 2 PDLVTLTIDGVEVSV----PKGTLVIRAAELLGIQIPRFCDHPLLDPVGACRQCLVEVE 56 (797)
T ss_pred CceEEEEECCEEEEe----CCCChHHHHHHHcCCCCCeecCCCCCCCCcccCccEEEEC
Confidence 358999999998766 6899999998753 23444444556799999999984
No 167
>TIGR01683 thiS thiamine biosynthesis protein ThiS. This model represents ThiS, a small thiamine-biosynthesis protein related to MoaD, a molybdenum cofactor biosynthesis protein. Both proteins are involved in sulfur transfer. ThiS has a conserved Gly-Gly C-terminus that is modified, in reactions requiring ThiI, ThiF, IscS, and a sulfur atom from Cys, into the thiocarboxylate that provides the sulfur for thiazole biosynthesis.
Probab=25.63 E-value=1.2e+02 Score=27.81 Aligned_cols=37 Identities=22% Similarity=0.297 Sum_probs=27.9
Q ss_pred EEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEECCc
Q psy7003 24 FTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTSS 75 (1520)
Q Consensus 24 ~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~~~~ 75 (1520)
++|||+.+.+ +.++||.++|.. +++.. ..+.|.+|+.
T Consensus 1 i~iNg~~~~~----~~~~tv~~ll~~-l~~~~----------~~v~v~vN~~ 37 (64)
T TIGR01683 1 ITVNGEPVEV----EDGLTLAALLES-LGLDP----------RRVAVAVNGE 37 (64)
T ss_pred CEECCeEEEc----CCCCcHHHHHHH-cCCCC----------CeEEEEECCE
Confidence 4799999876 467899999975 56652 4468999985
No 168
>PRK12577 succinate dehydrogenase iron-sulfur subunit; Provisional
Probab=25.58 E-value=74 Score=38.63 Aligned_cols=39 Identities=28% Similarity=0.692 Sum_probs=29.9
Q ss_pred cCCCCcchhHHHHhhhccc-Cc---cccccCCCccceeeeecc
Q psy7003 312 EVPPGTRLVDFIRDYARLK-GT---KYMCREGGCGVCTVTVTS 350 (1520)
Q Consensus 312 ~~~~~~tll~~Lr~~~~l~-gt---k~~C~~g~cGactV~v~~ 350 (1520)
++++++|+|+.|+...... +| ...|..+-||.|.|.|..
T Consensus 24 ~~~~~~tvL~~l~~i~~~~d~tL~~~~~c~~~~Cg~C~v~inG 66 (329)
T PRK12577 24 EVEPGNTILDCLNRIKWEQDGSLAFRKNCRNTICGSCAMRING 66 (329)
T ss_pred ECCCCChHHHHHHHhCCcCCCCcEEcCCCCCCCCCCCEEEECC
Confidence 5779999999999865433 32 346888999999999953
No 169
>PRK05863 sulfur carrier protein ThiS; Provisional
Probab=24.81 E-value=76 Score=29.34 Aligned_cols=38 Identities=13% Similarity=0.067 Sum_probs=28.1
Q ss_pred EEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEECCc
Q psy7003 23 RFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTSS 75 (1520)
Q Consensus 23 ~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~~~~ 75 (1520)
+++|||+++.+ ++++||.++|.. +++..- .+.|.+|+.
T Consensus 2 ~i~vNG~~~~~----~~~~tl~~ll~~-l~~~~~----------~vav~~N~~ 39 (65)
T PRK05863 2 IVVVNEEQVEV----DEQTTVAALLDS-LGFPEK----------GIAVAVDWS 39 (65)
T ss_pred EEEECCEEEEc----CCCCcHHHHHHH-cCCCCC----------cEEEEECCc
Confidence 57999999876 367899999975 566421 247888874
No 170
>PRK07609 CDP-6-deoxy-delta-3,4-glucoseen reductase; Validated
Probab=24.12 E-value=94 Score=37.42 Aligned_cols=47 Identities=21% Similarity=0.522 Sum_probs=33.2
Q ss_pred eEEEECCEEEEecccCCCCcchhHHHHhhhcccCccccccCCCccceeeeecc
Q psy7003 298 VRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTS 350 (1520)
Q Consensus 298 ~~f~~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~~g~cGactV~v~~ 350 (1520)
++|.-+|..+ +++++.|||+.|++. |+. -...|.+|.||.|-+-+.+
T Consensus 5 v~~~~~~~~~----~~~~g~tlL~a~~~~-gi~-~~~~C~~G~Cg~C~~~~~~ 51 (339)
T PRK07609 5 VTLQPSGRQF----TAEPDETILDAALRQ-GIH-LPYGCKNGACGSCKGRLLE 51 (339)
T ss_pred EEEecCCeEE----EeCCCCcHHHHHHHc-CCC-CCCCCCCeECCCCEEEEEE
Confidence 5555555443 346899999999864 433 3457999999999987643
No 171
>cd06220 DHOD_e_trans_like2 FAD/NAD binding domain in the electron transfer subunit of dihydroorotate dehydrogenase-like proteins. Dihydroorotate dehydrogenases (DHODs) catalyze the only redox reaction in pyrimidine de novo biosynthesis. They catalyze the oxidation of (S)-dihydroorotate to orotate coupled with the reduction of NAD+. In L. lactis, DHOD B (encoded by pyrDa) is co-expressed with pyrK and both gene products are required for full activity, as well as 3 cofactors: FMN, FAD, and an [2Fe-2S] cluster.
Probab=23.71 E-value=38 Score=38.51 Aligned_cols=17 Identities=35% Similarity=0.796 Sum_probs=15.0
Q ss_pred CCCCCCCCCeeEEEECC
Q psy7003 58 YMCREGGCGVCTVTVTS 74 (1520)
Q Consensus 58 ~~c~~g~cGactv~~~~ 74 (1520)
..|+.|.||+|.|...|
T Consensus 201 ~~cg~g~C~~C~v~~~~ 217 (233)
T cd06220 201 MKCGIGICGSCCIDPTG 217 (233)
T ss_pred ccCcCCCcCccEeccCC
Confidence 57999999999998765
No 172
>PRK05659 sulfur carrier protein ThiS; Validated
Probab=22.61 E-value=88 Score=28.61 Aligned_cols=37 Identities=22% Similarity=0.431 Sum_probs=26.6
Q ss_pred EEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEECC
Q psy7003 23 RFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTS 74 (1520)
Q Consensus 23 ~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~~~ 74 (1520)
+++|||+.+++ +.++||.++|.. +++.... ..|.+|+
T Consensus 2 ~i~vNG~~~~~----~~~~tl~~lL~~-l~~~~~~----------vav~vNg 38 (66)
T PRK05659 2 NIQLNGEPREL----PDGESVAALLAR-EGLAGRR----------VAVEVNG 38 (66)
T ss_pred EEEECCeEEEc----CCCCCHHHHHHh-cCCCCCe----------EEEEECC
Confidence 58999998865 467899999964 5664322 2477787
No 173
>PRK05802 hypothetical protein; Provisional
Probab=22.58 E-value=48 Score=40.00 Aligned_cols=19 Identities=47% Similarity=0.920 Sum_probs=16.6
Q ss_pred CcCCCCCCCCCeeEEEECC
Q psy7003 56 TKYMCREGGCGVCTVTVTS 74 (1520)
Q Consensus 56 ~k~~c~~g~cGactv~~~~ 74 (1520)
.+-.|+.|.||+|+|-.++
T Consensus 288 ~~M~CG~G~Cg~C~v~~~g 306 (320)
T PRK05802 288 AKMCCGEGICGACTVRYGG 306 (320)
T ss_pred CeeeCcCccCCeeEEEECC
Confidence 4678999999999999765
No 174
>PRK08640 sdhB succinate dehydrogenase iron-sulfur subunit; Reviewed
Probab=22.44 E-value=90 Score=36.51 Aligned_cols=40 Identities=23% Similarity=0.566 Sum_probs=29.7
Q ss_pred cCCCCcchhHHHHhhhc----ccCc-------cccccCCCccceeeeeccC
Q psy7003 312 EVPPGTRLVDFIRDYAR----LKGT-------KYMCREGGCGVCTVTVTSS 351 (1520)
Q Consensus 312 ~~~~~~tll~~Lr~~~~----l~gt-------k~~C~~g~cGactV~v~~~ 351 (1520)
+..+++|+|+.|..-+. +.|+ ...|..|-||.|.+.|...
T Consensus 28 ~~~~~~tvLdaL~~I~~~~~~~~g~~~~~l~fr~sCr~giCGsCam~ING~ 78 (249)
T PRK08640 28 PYRPNMNVISALMEIRRNPVNAKGEKTTPVVWDMNCLEEVCGACSMVINGK 78 (249)
T ss_pred cCCCCCcHHHHHHHHHhcccccccccCCCeeEecccCCCCCCcCeeEECCc
Confidence 45689999999987643 2221 3479999999999999544
No 175
>PRK00647 hypothetical protein; Validated
Probab=22.27 E-value=1.8e+02 Score=29.54 Aligned_cols=44 Identities=11% Similarity=0.153 Sum_probs=40.7
Q ss_pred CCeEEEEecCcccCcchHHHHHHHHHHHhCCCCCcEEEecCCCC
Q psy7003 1327 DATVAITTSGIEIGQGLHTKVAQACAYELGIPIEKIVLKPAQNN 1370 (1520)
Q Consensus 1327 DGsV~i~~g~~e~GQG~~T~~aQiaA~~Lgip~e~I~v~~~dT~ 1370 (1520)
+|.+.|..-+.+.----+-.+.+..|+.||||-.+|.+..+.|.
T Consensus 26 ~~~Lkvrv~ApPvdGKAN~ali~~LAk~l~vpks~I~Iv~G~tS 69 (96)
T PRK00647 26 GGILKVRVTEVPEKGKANDAVIALLAKFLSLPKRDVTLIAGETS 69 (96)
T ss_pred CCEEEEEEecCCCCChHHHHHHHHHHHHhCCChhhEEEEecCCC
Confidence 68888998899998889999999999999999999999998875
No 176
>PF10418 DHODB_Fe-S_bind: Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B; InterPro: IPR019480 Lactococcus lactis is one of the few organisms with two dihydroorotate dehydrogenases (DHODs) A and B []. The B enzyme is typical of DHODs in Gram-positive bacteria that use NAD+ as the second substrate. DHODB is a heterotetramer composed of a central homodimer of PyrDB subunits resembling the DHODA structure and two PyrK subunits along with three different cofactors: FMN, FAD, and a [2Fe-2S] cluster. The [2Fe-2S] iron-sulphur cluster binds to this C-terminal domain of the PyrK subunit, which is at the interface between the flavin and NAD binding domains and contains three beta-strands. The four cysteine residues at the N-terminal part of this domain are the ones that bind, in pairs, to the iron-sulphur cluster. The conformation of the whole molecule means that the iron-sulphur cluster is localized in a well-ordered part of this domain close to the FAD binding site []. The FAD and NAD binding domains are IPR008333 from INTERPRO and IPR001433 from INTERPRO respectively. ; PDB: 1EP2_B 1EP3_B 1EP1_B.
Probab=21.66 E-value=55 Score=27.82 Aligned_cols=19 Identities=37% Similarity=0.906 Sum_probs=14.4
Q ss_pred cCCCCCCCCCeeEEEECCc
Q psy7003 57 KYMCREGGCGVCTVTVTSS 75 (1520)
Q Consensus 57 k~~c~~g~cGactv~~~~~ 75 (1520)
+-.|+-|.|++|.|-..+.
T Consensus 3 ~M~CG~G~C~~C~v~~~~~ 21 (40)
T PF10418_consen 3 RMACGVGACGGCVVPVKDG 21 (40)
T ss_dssp --SSSSSSS-TTEEECSST
T ss_pred cccCCCcEeCCcEeeeecC
Confidence 5689999999999988864
No 177
>PRK12575 succinate dehydrogenase iron-sulfur subunit; Provisional
Probab=21.58 E-value=1.1e+02 Score=35.55 Aligned_cols=37 Identities=24% Similarity=0.452 Sum_probs=28.7
Q ss_pred CCcchhHHHHhhhcccCc---cccccCCCccceeeeeccC
Q psy7003 315 PGTRLVDFIRDYARLKGT---KYMCREGGCGVCTVTVTSS 351 (1520)
Q Consensus 315 ~~~tll~~Lr~~~~l~gt---k~~C~~g~cGactV~v~~~ 351 (1520)
.++|+||.|..-...-++ ...|..|-||.|.++|...
T Consensus 32 ~~~tvld~L~~ik~~d~~l~fr~sCr~giCGsCa~~iNG~ 71 (235)
T PRK12575 32 EDRMLLDVLGRVKAQDETLSYRRSCREGICGSDAMNINGR 71 (235)
T ss_pred CCCcHHHHHHHHHhcCCCeeeeccCCCCCCCCCeeEECCe
Confidence 367999999986655443 4579999999999999554
No 178
>PRK08493 NADH dehydrogenase subunit G; Validated
Probab=21.20 E-value=1.2e+02 Score=41.25 Aligned_cols=48 Identities=21% Similarity=0.342 Sum_probs=35.6
Q ss_pred ceEEEECCEEEEecccCCCCcchhHHHHhhhcccCcc----cccc-CCCccceeeeec
Q psy7003 297 TVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTK----YMCR-EGGCGVCTVTVT 349 (1520)
Q Consensus 297 ~~~f~~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk----~~C~-~g~cGactV~v~ 349 (1520)
|++|++||..+++ ++|+|+++.++. +|...-. ..|. .|.|+.|.|.|.
T Consensus 1 mv~i~IdG~~v~~----~~G~til~aa~~-~gi~iP~lC~~~~~~~~G~Cr~C~VeV~ 53 (819)
T PRK08493 1 MITITINGKECEA----QEGEYILNVARR-NGIFIPAICYLSGCSPTLACRLCMVEAD 53 (819)
T ss_pred CeEEEECCEEEEe----CCCCHHHHHHHH-cCCccccccccCCCCCCccccceEEEEC
Confidence 5789999998765 589999999997 4433322 1344 489999999884
No 179
>PRK05090 hypothetical protein; Validated
Probab=21.01 E-value=2e+02 Score=29.12 Aligned_cols=44 Identities=5% Similarity=0.148 Sum_probs=40.4
Q ss_pred CCeEEEEecCcccCcchHHHHHHHHHHHhCCCCCcEEEecCCCC
Q psy7003 1327 DATVAITTSGIEIGQGLHTKVAQACAYELGIPIEKIVLKPAQNN 1370 (1520)
Q Consensus 1327 DGsV~i~~g~~e~GQG~~T~~aQiaA~~Lgip~e~I~v~~~dT~ 1370 (1520)
+|.+.|...+...--=.+..+....|+.||+|.++|.+..+.|.
T Consensus 31 ~~~lkv~v~ApPveGkAN~ali~~LAk~l~v~ks~I~i~~G~ts 74 (95)
T PRK05090 31 GDELKVAITAPPVDGQANAHLLKFLAKQFRVAKSQVVIEKGELG 74 (95)
T ss_pred CCEEEEEEecCCCCChHHHHHHHHHHHHhCCChhhEEEEecCCC
Confidence 78899998888888889999999999999999999999998875
No 180
>PRK08221 anaerobic sulfite reductase subunit B; Provisional
Probab=20.91 E-value=35 Score=39.75 Aligned_cols=16 Identities=38% Similarity=0.974 Sum_probs=13.9
Q ss_pred CcCCCCCCCCCeeEEE
Q psy7003 56 TKYMCREGGCGVCTVT 71 (1520)
Q Consensus 56 ~k~~c~~g~cGactv~ 71 (1520)
++-.|++|-||+|+|.
T Consensus 227 ~~m~cg~g~c~~c~~~ 242 (263)
T PRK08221 227 RKMCCGVGKCGHCKID 242 (263)
T ss_pred ceeEccCcccCCcccC
Confidence 4667999999999985
No 181
>PRK01530 hypothetical protein; Reviewed
Probab=20.22 E-value=1.9e+02 Score=29.70 Aligned_cols=44 Identities=9% Similarity=0.062 Sum_probs=39.5
Q ss_pred CCeEEEEecCcccCcchHHHHHHHHHHHhCCCCCcEEEecCCCC
Q psy7003 1327 DATVAITTSGIEIGQGLHTKVAQACAYELGIPIEKIVLKPAQNN 1370 (1520)
Q Consensus 1327 DGsV~i~~g~~e~GQG~~T~~aQiaA~~Lgip~e~I~v~~~dT~ 1370 (1520)
+|.+.|...+.+.--=.+..+....|..||||..+|.+..+.|.
T Consensus 38 ~~~Lki~v~ApPvdGkAN~ali~~LAk~l~v~ks~I~IvsG~tS 81 (105)
T PRK01530 38 IPYLKLSIKAIPEQGKANEEIINYLAKEWKLSRSNIEIIKGHTH 81 (105)
T ss_pred CCEEEEEEecCCCCChHHHHHHHHHHHHhCCChhhEEEEecCCC
Confidence 56888888888888788999999999999999999999998885
No 182
>cd00565 ThiS ThiaminS ubiquitin-like sulfur carrier protein. ThiS (ThiaminS) is a sulfur carrier protein involved in thiamin biosynthesis in bacteria. The ThiS fold, like those of two closely related proteins MoaD and Urm1, is similar to that of ubiquitin although there is little or no sequence similarity.
Probab=20.08 E-value=2.1e+02 Score=26.28 Aligned_cols=37 Identities=19% Similarity=0.330 Sum_probs=27.5
Q ss_pred EEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEECCc
Q psy7003 24 FTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTSS 75 (1520)
Q Consensus 24 ~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~~~~ 75 (1520)
++|||+.+++ +.++|+.++|.. +++.- ..|.|.+|+.
T Consensus 2 i~iNg~~~~~----~~~~tv~~ll~~-l~~~~----------~~i~V~vNg~ 38 (65)
T cd00565 2 ITVNGEPREV----EEGATLAELLEE-LGLDP----------RGVAVALNGE 38 (65)
T ss_pred EEECCeEEEc----CCCCCHHHHHHH-cCCCC----------CcEEEEECCE
Confidence 7899999876 467899999964 56542 3467888985
Done!