Query psy7003
Match_columns 1520
No_of_seqs 575 out of 4044
Neff 5.5
Searched_HMMs 29240
Date Sat Aug 17 00:21:54 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7003.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7003hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3zyv_A AOH1; oxidoreductase, m 100.0 2E-224 6E-229 2210.7 97.7 1079 19-1519 7-1231(1335)
2 3unc_A Xanthine dehydrogenase/ 100.0 5E-220 2E-224 2156.3 102.9 1077 21-1519 5-1226(1332)
3 1vlb_A Aldehyde oxidoreductase 100.0 1E-160 5E-165 1547.7 85.7 625 740-1519 174-835 (907)
4 1dgj_A Aldehyde oxidoreductase 100.0 1E-159 3E-164 1539.9 86.4 625 740-1519 174-835 (907)
5 3nvz_C Xanthine dehydrogenase/ 100.0 1E-134 3E-139 1286.3 71.2 628 740-1519 1-656 (755)
6 2w3s_B Xanthine dehydrogenase; 100.0 2E-132 7E-137 1269.5 72.3 629 741-1519 2-695 (777)
7 1rm6_A 4-hydroxybenzoyl-COA re 100.0 1E-127 4E-132 1225.9 70.0 629 738-1519 7-693 (769)
8 1ffv_B CUTL, molybdoprotein of 100.0 2E-127 8E-132 1226.3 68.2 636 740-1519 16-724 (803)
9 1n62_B Carbon monoxide dehydro 100.0 3E-127 1E-131 1227.3 67.1 637 739-1519 18-730 (809)
10 1t3q_B Quinoline 2-oxidoreduct 100.0 2E-126 7E-131 1216.6 68.3 621 741-1519 13-710 (788)
11 3hrd_A Nicotinate dehydrogenas 100.0 5.6E-86 1.9E-90 792.7 43.5 388 740-1263 6-414 (425)
12 2w3s_A Xanthine dehydrogenase; 100.0 2.8E-70 9.6E-75 660.9 26.0 318 20-674 1-346 (462)
13 3nvw_A Xanthine dehydrogenase/ 100.0 3.9E-55 1.3E-59 458.4 14.5 161 20-228 3-163 (164)
14 3hrd_D Nicotinate dehydrogenas 100.0 2.2E-50 7.5E-55 422.6 18.0 152 19-230 3-154 (160)
15 1n62_A Carbon monoxide dehydro 100.0 6.2E-48 2.1E-52 407.2 17.9 153 19-230 3-155 (166)
16 1ffv_A CUTS, iron-sulfur prote 100.0 8.5E-48 2.9E-52 405.0 17.6 152 19-230 3-154 (163)
17 3hrd_B Nicotinate dehydrogenas 100.0 8.3E-44 2.8E-48 414.5 27.2 221 1298-1519 2-256 (330)
18 1rm6_C 4-hydroxybenzoyl-COA re 100.0 3.4E-43 1.2E-47 370.4 17.0 151 20-230 3-153 (161)
19 1t3q_A Quinoline 2-oxidoreduct 100.0 3.2E-39 1.1E-43 342.8 16.7 153 18-230 8-160 (168)
20 3nvz_B Xanthine dehydrogenase/ 100.0 6.7E-29 2.3E-33 286.7 12.5 158 514-674 9-191 (305)
21 3hrd_C Nicotinate dehydrogenas 100.0 1.2E-28 4.2E-33 283.4 11.5 149 516-673 4-178 (296)
22 1t3q_C Quinoline 2-oxidoreduct 99.9 3.8E-28 1.3E-32 278.3 12.1 148 516-673 6-175 (288)
23 1n62_C Carbon monoxide dehydro 99.9 3.6E-27 1.2E-31 270.3 11.1 148 516-673 6-176 (288)
24 1rm6_B 4-hydroxybenzoyl-COA re 99.9 2.3E-26 7.9E-31 266.9 14.4 146 516-672 7-215 (324)
25 1ffv_C CUTM, flavoprotein of c 99.9 7E-25 2.4E-29 251.3 12.8 148 516-673 6-176 (287)
26 3zyv_A AOH1; oxidoreductase, m 99.9 8E-25 2.7E-29 293.1 5.8 101 293-395 5-171 (1335)
27 3nvw_A Xanthine dehydrogenase/ 99.8 3.3E-22 1.1E-26 209.8 6.2 96 295-392 2-163 (164)
28 3hrd_D Nicotinate dehydrogenas 99.8 8.5E-20 2.9E-24 191.5 4.2 93 297-392 5-152 (160)
29 3unc_A Xanthine dehydrogenase/ 99.7 1.7E-18 5.7E-23 231.4 6.2 98 296-395 4-167 (1332)
30 1ffv_A CUTS, iron-sulfur prote 99.7 2E-18 6.7E-23 182.1 4.9 93 297-392 5-152 (163)
31 2w3s_A Xanthine dehydrogenase; 99.7 2.7E-18 9.1E-23 208.1 5.4 93 297-392 2-150 (462)
32 1n62_A Carbon monoxide dehydro 99.7 3.9E-18 1.3E-22 180.3 4.9 93 297-392 5-153 (166)
33 1rm6_C 4-hydroxybenzoyl-COA re 99.6 2.3E-16 7.9E-21 166.4 3.9 94 296-392 3-151 (161)
34 1vlb_A Aldehyde oxidoreductase 99.5 8.9E-15 3E-19 190.2 4.5 92 297-391 3-152 (907)
35 1dgj_A Aldehyde oxidoreductase 99.5 7.5E-15 2.6E-19 190.9 2.5 92 297-391 3-152 (907)
36 1t3q_A Quinoline 2-oxidoreduct 99.4 1E-13 3.5E-18 147.3 5.1 95 295-392 9-158 (168)
37 3vr8_B Iron-sulfur subunit of 98.8 5.1E-09 1.7E-13 119.6 6.3 69 29-110 55-128 (282)
38 2wdq_B Succinate dehydrogenase 98.6 2.4E-08 8.2E-13 111.2 7.0 68 29-109 21-95 (238)
39 3c8y_A Iron hydrogenase 1; dit 98.5 4.7E-08 1.6E-12 122.0 5.8 104 22-143 2-111 (574)
40 2bs2_B Quinol-fumarate reducta 98.5 1.4E-07 4.9E-12 105.2 7.0 69 29-110 24-96 (241)
41 2h88_B Succinate dehydrogenase 98.5 9.5E-08 3.3E-12 107.5 5.3 69 29-110 31-104 (252)
42 1kf6_B Fumarate reductase iron 98.2 1.4E-06 4.9E-11 97.2 7.8 68 29-110 24-95 (243)
43 1l5p_A Ferredoxin; [2Fe-2S] cl 97.9 1.3E-05 4.3E-10 76.9 6.4 51 21-74 2-53 (93)
44 2wlb_A ETP1-FD, electron trans 97.4 0.00011 3.7E-09 71.6 5.4 52 20-75 4-57 (103)
45 1iue_A Ferredoxin; electron tr 97.4 0.00014 4.9E-09 70.2 6.2 52 20-75 3-55 (98)
46 1a70_A Ferredoxin; iron-sulfur 97.4 0.00014 4.9E-09 70.1 6.1 50 21-74 4-54 (97)
47 1wri_A Ferredoxin II, ferredox 97.4 0.00018 6.2E-09 68.8 6.7 50 20-74 2-52 (93)
48 1jq4_A Methane monooxygenase c 97.4 9.9E-05 3.4E-09 71.2 4.4 51 21-75 4-58 (98)
49 1awd_A Ferredoxin; electron tr 97.4 0.00025 8.4E-09 68.0 7.0 51 21-75 2-53 (94)
50 1frr_A Ferredoxin I; electron 97.3 0.00013 4.6E-09 69.7 4.7 78 20-104 2-88 (95)
51 1frd_A Heterocyst [2Fe-2S] fer 97.0 0.00056 1.9E-08 65.8 5.2 51 20-74 3-56 (98)
52 3lxf_A Ferredoxin; iron, iron- 97.0 0.00074 2.5E-08 66.1 5.6 81 21-104 2-100 (104)
53 1b9r_A Protein (terpredoxin); 97.0 0.00053 1.8E-08 66.9 4.6 52 21-75 2-55 (105)
54 3hui_A Ferredoxin; cytochrome 96.9 0.00071 2.4E-08 68.7 5.3 82 19-103 21-120 (126)
55 1xlq_A Putidaredoxin, PDX; [2F 96.9 0.00075 2.6E-08 65.9 5.3 52 21-75 2-55 (106)
56 1czp_A Ferredoxin I; [2Fe-2S] 96.8 0.00097 3.3E-08 64.3 5.2 50 21-74 4-56 (98)
57 1uwm_A Ferredoxin VI, FDVI; el 96.8 0.00091 3.1E-08 65.3 4.8 51 21-74 2-54 (106)
58 1i7h_A Ferredoxin; 2Fe-2S,elec 96.8 0.00077 2.6E-08 66.5 4.0 50 21-74 3-57 (111)
59 2bt6_A Adrenodoxin 1; rutheniu 96.5 0.0025 8.7E-08 62.4 5.5 79 20-102 7-105 (108)
60 2y5c_A Adrenodoxin-like protei 95.7 0.0088 3E-07 58.7 4.9 80 20-103 6-103 (109)
61 1doi_A 2Fe-2S ferredoxin; halo 95.5 0.0061 2.1E-07 62.0 3.1 50 20-74 28-78 (128)
62 3i9v_3 NADH-quinone oxidoreduc 95.3 0.0089 3E-07 77.4 4.4 106 22-137 2-126 (783)
63 1l5p_A Ferredoxin; [2Fe-2S] cl 95.0 0.029 9.8E-07 53.6 5.8 51 297-350 2-53 (93)
64 1krh_A Benzoate 1,2-dioxygenas 94.6 0.025 8.5E-07 65.6 5.3 49 22-74 4-56 (338)
65 3ah7_A [2Fe-2S]ferredoxin; [2F 94.4 0.045 1.6E-06 53.9 5.9 36 36-73 20-56 (113)
66 3n9z_C Adrenodoxin; cytochrome 93.7 0.013 4.3E-07 59.3 0.3 83 18-104 4-106 (123)
67 2pia_A Phthalate dioxygenase r 93.1 0.054 1.8E-06 62.5 4.3 48 22-73 238-285 (321)
68 1jq4_A Methane monooxygenase c 93.0 0.076 2.6E-06 50.9 4.5 50 296-349 3-55 (98)
69 1y56_A Hypothetical protein PH 92.4 0.14 4.9E-06 62.4 6.9 73 19-108 13-91 (493)
70 1iue_A Ferredoxin; electron tr 91.9 0.16 5.4E-06 48.8 5.1 49 297-349 4-52 (98)
71 1wri_A Ferredoxin II, ferredox 91.5 0.22 7.4E-06 47.4 5.5 48 297-349 3-50 (93)
72 2wlb_A ETP1-FD, electron trans 91.3 0.17 5.6E-06 49.0 4.5 51 296-350 4-56 (103)
73 1a70_A Ferredoxin; iron-sulfur 91.2 0.21 7.1E-06 47.9 5.1 49 297-349 4-52 (97)
74 2wdq_B Succinate dehydrogenase 91.0 0.16 5.5E-06 56.2 4.8 39 312-350 26-69 (238)
75 1uxy_A MURB, uridine diphospho 90.8 0.095 3.3E-06 61.5 2.8 104 516-627 16-121 (340)
76 1awd_A Ferredoxin; electron tr 90.2 0.39 1.3E-05 45.7 6.0 49 297-349 2-50 (94)
77 3zyy_X Iron-sulfur cluster bin 89.5 0.32 1.1E-05 61.3 6.0 50 19-74 3-53 (631)
78 1rm6_A 4-hydroxybenzoyl-COA re 88.2 3.7 0.00013 53.1 14.8 91 1148-1239 628-747 (769)
79 1hsk_A UDP-N-acetylenolpyruvoy 88.2 0.54 1.9E-05 54.7 6.5 75 517-597 51-128 (326)
80 3vr8_B Iron-sulfur subunit of 87.0 0.36 1.2E-05 55.2 3.9 40 312-351 60-104 (282)
81 1czp_A Ferredoxin I; [2Fe-2S] 86.6 0.57 1.9E-05 44.9 4.5 49 297-349 4-54 (98)
82 1frr_A Ferredoxin I; electron 86.2 0.51 1.7E-05 44.7 3.9 48 297-349 3-51 (95)
83 1frd_A Heterocyst [2Fe-2S] fer 86.1 0.62 2.1E-05 44.5 4.5 49 297-349 4-54 (98)
84 3lxf_A Ferredoxin; iron, iron- 84.6 0.85 2.9E-05 44.4 4.7 50 298-350 3-54 (104)
85 3hui_A Ferredoxin; cytochrome 83.1 1.1 3.9E-05 45.2 5.1 56 292-350 16-75 (126)
86 2vfr_A Xylitol oxidase, aldito 83.1 0.98 3.4E-05 54.2 5.4 77 518-597 24-100 (422)
87 1xlq_A Putidaredoxin, PDX; [2F 83.0 0.96 3.3E-05 43.8 4.3 51 297-350 2-54 (106)
88 1t3q_B Quinoline 2-oxidoreduct 82.2 32 0.0011 44.7 19.1 92 1147-1239 643-767 (788)
89 1i7h_A Ferredoxin; 2Fe-2S,elec 81.7 1.2 4.2E-05 43.5 4.6 37 312-350 20-57 (111)
90 1n62_B Carbon monoxide dehydro 81.5 45 0.0015 43.4 20.2 57 973-1029 507-575 (809)
91 1uwm_A Ferredoxin VI, FDVI; el 80.4 1.3 4.3E-05 43.0 4.1 50 297-349 2-53 (106)
92 1kf6_B Fumarate reductase iron 79.6 1.4 4.7E-05 48.8 4.6 39 312-350 29-71 (243)
93 2h88_B Succinate dehydrogenase 79.6 1.1 3.9E-05 50.0 4.0 39 312-350 36-79 (252)
94 2gag_A Heterotetrameric sarcos 78.7 3.6 0.00012 54.5 9.0 81 19-111 20-113 (965)
95 3hrd_A Nicotinate dehydrogenas 78.6 13 0.00045 44.7 13.0 124 1316-1479 188-311 (425)
96 2bs2_B Quinol-fumarate reducta 77.8 1.8 6E-05 48.0 4.7 38 312-349 29-70 (241)
97 1b9r_A Protein (terpredoxin); 76.7 1.4 4.7E-05 42.6 3.1 51 297-350 2-54 (105)
98 3c8y_A Iron hydrogenase 1; dit 75.8 2.7 9.2E-05 52.6 6.1 49 297-350 1-55 (574)
99 1ffv_B CUTL, molybdoprotein of 74.7 49 0.0017 43.1 17.5 55 973-1027 501-567 (803)
100 3tx1_A UDP-N-acetylenolpyruvoy 74.2 4.5 0.00015 47.1 7.1 77 516-598 56-135 (322)
101 4feh_A Oxidoreductase DPRE1; a 72.4 4.6 0.00016 49.4 6.9 81 516-597 44-127 (481)
102 3rja_A Carbohydrate oxidase; p 70.8 7.1 0.00024 47.6 8.0 78 517-596 39-120 (473)
103 3pm9_A Putative oxidoreductase 66.5 7.6 0.00026 47.4 7.1 79 517-597 54-135 (476)
104 3nvz_C Xanthine dehydrogenase/ 66.0 39 0.0013 43.7 13.7 126 1316-1481 176-304 (755)
105 2y3s_A TAML; oxidoreductase; H 66.0 9 0.00031 47.4 7.7 75 517-596 61-140 (530)
106 2bvf_A 6-hydroxy-D-nicotine ox 64.0 6.6 0.00023 47.5 5.8 75 517-597 41-120 (459)
107 2bt6_A Adrenodoxin 1; rutheniu 63.1 6.1 0.00021 38.3 4.3 50 296-349 5-60 (108)
108 3i99_A UDP-N-acetylenolpyruvoy 62.2 8.4 0.00029 45.4 6.1 76 516-597 32-112 (357)
109 2y5c_A Adrenodoxin-like protei 62.2 7.5 0.00026 37.8 4.8 49 297-349 5-57 (109)
110 3fw9_A Reticuline oxidase; BI- 62.0 9.4 0.00032 46.9 6.7 75 517-596 48-128 (495)
111 2ipi_A Aclacinomycin oxidoredu 61.9 7.7 0.00026 47.9 5.9 75 517-596 58-137 (521)
112 2wdx_A Putative hexose oxidase 59.7 8.8 0.0003 47.4 5.9 75 517-596 60-139 (523)
113 3pop_A GILR oxidase; FAD bindi 58.8 12 0.00041 46.1 6.8 74 517-595 37-115 (501)
114 1wvf_A 4-cresol dehydrogenase 57.4 17 0.0006 44.6 8.0 77 516-597 58-142 (520)
115 1doi_A 2Fe-2S ferredoxin; halo 57.2 5 0.00017 40.6 2.6 48 297-350 29-77 (128)
116 1zr6_A Glucooligosaccharide ox 57.1 9.3 0.00032 46.9 5.5 74 517-595 45-123 (503)
117 3vte_A Tetrahydrocannabinolic 56.6 10 0.00036 46.8 5.8 77 516-597 55-137 (518)
118 2gqt_A UDP-N-acetylenolpyruvyl 56.4 8.5 0.00029 43.6 4.6 69 518-598 25-94 (268)
119 2i0k_A Oxidoreductase; MIX alp 55.7 13 0.00046 46.2 6.7 80 517-597 38-125 (561)
120 2w3s_B Xanthine dehydrogenase; 55.2 87 0.003 40.6 14.2 122 1316-1479 178-302 (777)
121 2uuu_A Alkyldihydroxyacetoneph 54.6 13 0.00044 46.6 6.2 79 517-597 140-224 (584)
122 1krh_A Benzoate 1,2-dioxygenas 54.4 10 0.00036 43.5 5.0 48 298-349 4-54 (338)
123 1f0x_A DLDH, D-lactate dehydro 54.3 14 0.00046 46.3 6.3 77 517-598 48-134 (571)
124 3hrd_B Nicotinate dehydrogenas 54.1 19 0.00065 41.9 7.2 58 970-1027 21-90 (330)
125 4bby_A Alkyldihydroxyacetoneph 52.1 17 0.00059 46.1 6.9 79 517-597 208-293 (658)
126 1e8g_A Vanillyl-alcohol oxidas 49.2 24 0.00084 43.8 7.5 76 517-597 73-157 (560)
127 3kwl_A Uncharacterized protein 48.8 28 0.00094 43.0 7.8 77 11-110 14-104 (514)
128 1w1o_A Cytokinin dehydrogenase 44.7 23 0.00078 43.7 6.2 78 517-597 71-159 (534)
129 3js8_A Cholesterol oxidase; ch 42.9 18 0.00061 45.0 4.8 78 517-597 32-119 (540)
130 3ah7_A [2Fe-2S]ferredoxin; [2F 41.8 32 0.0011 33.4 5.5 36 312-349 20-56 (113)
131 2pia_A Phthalate dioxygenase r 41.3 17 0.00058 41.6 4.0 50 296-349 236-285 (321)
132 2exr_A Cytokinin dehydrogenase 38.9 46 0.0016 41.0 7.6 73 517-593 64-147 (524)
133 3i9v_3 NADH-quinone oxidoreduc 32.3 35 0.0012 44.1 5.3 48 297-349 1-53 (783)
134 1tyg_B YJBS; alpha beta barrel 32.1 39 0.0013 32.0 4.1 40 21-75 20-60 (87)
135 3n9z_C Adrenodoxin; cytochrome 29.8 14 0.00046 37.1 0.6 49 298-349 8-59 (123)
136 2l32_A Small archaeal modifier 29.6 29 0.001 31.7 2.8 65 20-110 1-65 (74)
137 2kl0_A Putative thiamin biosyn 29.1 44 0.0015 30.4 3.9 62 23-110 2-64 (73)
138 3tsh_A Pollen allergen PHL P 4 28.8 61 0.0021 39.5 6.3 76 517-597 55-138 (500)
139 2al3_A TUG long isoform; TUG U 21.8 42 0.0014 32.1 2.3 45 13-59 4-51 (90)
140 2kwp_A Transcription elongatio 20.2 77 0.0027 32.0 4.0 28 1452-1481 45-72 (129)
No 1
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=100.00 E-value=1.6e-224 Score=2210.68 Aligned_cols=1079 Identities=30% Similarity=0.453 Sum_probs=945.5
Q ss_pred ceEEEEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEECCccCCCCcccccccccchhhHHhcC
Q psy7003 19 SSTVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTSSHPVTGVDSTYSVNACLVLVHMCG 98 (1520)
Q Consensus 19 ~~~~~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~~~~~~~~~~~~~~~v~scl~~~~~~~ 98 (1520)
+.+|+|+|||+++++. +++|++|||+|||++++|||||+||+||+||||||+|..+|+.+++++|++|||||+|++++|
T Consensus 7 ~~~l~F~vNG~~v~~~-~~~p~~tLl~~LR~~~~ltGTK~gC~EG~CGACtV~v~~~~~~~~~~~~~avNsCl~~l~~~~ 85 (1335)
T 3zyv_A 7 SDELIFFVNGKKVTER-NADPEVNLLFYLRKVIRLTGTKYGCGGGDCGACTVMISRYDPISKRISHFSATACLVPICSLH 85 (1335)
T ss_dssp CCCEEEEETTEEEEES-SCCTTCBHHHHHHHTTCCTTSCCSCSSSSSCTTEEEEEEEETTTTEEEEEEEETTTCBGGGCT
T ss_pred CCeEEEEECCEEEEeC-CCCcCccHHHHHhccCCCcccccccCCCCCcceEEEEeeEeCCCCeEEEEEhhHHHHHHHHhc
Confidence 3469999999999985 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEecCCCCCCCCCCHHHHHHHHhCCCCCCCCchhHHHHHhhhhccccccccCCcchhhHHhhhhhccCCCcchhHH
Q psy7003 99 GWAITTVEGLGSKKKGYHNVQTRLATMNGSQCGYCSPGMVMAMYSRHRLTASTMCGHNFTKTLLLQMYCIFLPPFSLEVL 178 (1520)
Q Consensus 99 g~~i~T~eg~~~~~~~~h~vq~~~~~~~~~qcg~ctpg~vm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (1520)
|++|+||||||+++++|||||+||+++|||||||||||||||||+
T Consensus 86 g~~v~TvEglg~~~~~lHpvQ~~~a~~hgsQCGFCTPGfVMSmya----------------------------------- 130 (1335)
T 3zyv_A 86 GAAVTTVEGIGSTKTRIHPVQERIAKGHGTQCGFCTPGMVMSIYT----------------------------------- 130 (1335)
T ss_dssp TCEEECHHHHCCTTSCCCHHHHHHHHTTCCSSCTTHHHHHHHHHH-----------------------------------
T ss_pred CCEEEeeCCCCCCCCCCCHHHHHHHhcCCCcCCCCCcHHHHHHHH-----------------------------------
Confidence 999999999999988999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCHHHHHHHhcCCccCCCCcHHHHHHHHHhhhhcCcccccccccccccccccccccccccc
Q psy7003 179 FVILLIFVIVSFLEGKKYKVTKSEVEGALGGNICRCTGFRPILDAFQSFSCDASDSVQRKCADIEVRGKRDFISHESLGT 258 (1520)
Q Consensus 179 ~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~gn~crctgy~~i~~a~~~~~~~~~~~~~~~~~d~e~~~~~~~~~~~~~~~ 258 (1520)
||++++ +||++||+++|+||||||||||||+||+|+|+.+.+ |.+.+..+
T Consensus 131 -----------ll~~~~-~pt~~~ie~al~GNLCRCTGYRPIldA~ksfa~~~~------~~~~~~~~------------ 180 (1335)
T 3zyv_A 131 -----------LLRNHP-EPSTEQIMETLGGNLCRCTGYRPIVESAKSFCPSST------CCQMNGEG------------ 180 (1335)
T ss_dssp -----------HHHHCS-SCCHHHHHHHHTTCCCSSSCSHHHHHHHHTTCC-----------------------------
T ss_pred -----------HHHcCC-CCCHHHHHHHhCCcccccCCCHHHHHHHHHhhccCc------cccccCCC------------
Confidence 888887 899999999999999999999999999999997753 21221100
Q ss_pred cccccccccchhhhhhhhhcccccccccccccccCCCcceEEEECCEEEEecccCCCCcchhHHHHhhhcccCccccccC
Q psy7003 259 QLLDWAFDTLVFSVLEFRLATLIIVPILLPRLFSDTSSTVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCRE 338 (1520)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~f~~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~~ 338 (1520)
.+|..
T Consensus 181 ---------------------------------------------------------------------------~~~~~ 185 (1335)
T 3zyv_A 181 ---------------------------------------------------------------------------KCCLD 185 (1335)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ---------------------------------------------------------------------------ccccc
Confidence 01110
Q ss_pred CCccceeeeeccCCCcccccccccccccccccccCccccccCCccchhhhhcccCCCCcccccccccccccccccccccC
Q psy7003 339 GGCGVCTVTVTSSHPVTGVDSTYSVNACGDRCFTRNICRCTGFRPILDAFQSFSCDASDSVQRKCADIEVRGKRDFISHE 418 (1520)
Q Consensus 339 g~cGactV~v~~~hpvq~~~~~~~~~~Cg~~C~~gNLCRCTgyrpIlda~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (1520)
... +.+. +. ...|.
T Consensus 186 ~~~----------------------~~~~--------------~~----------------~~~~~-------------- 199 (1335)
T 3zyv_A 186 EEK----------------------NEPE--------------RK----------------NSVCT-------------- 199 (1335)
T ss_dssp -----------------------------------------------------------------C--------------
T ss_pred ccc----------------------cCcc--------------cc----------------ccccc--------------
Confidence 000 0000 00 00000
Q ss_pred CCCCCCCChhhhcccccccccCCCCCCcccccccc--CCCCccceeecCCCCCCcccccccccccccccccccccccCCC
Q psy7003 419 GLPEPEYDPTYRKNLAVSLFYKSHINPSIHNRTVM--GRGDVRSLFFGSSTLGEVPTRYKLDLMGSCKLKTKLDQSEDSN 496 (1520)
Q Consensus 419 ~~~~~~~~~~~~~~l~~~~~y~~s~epi~~~~l~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 496 (1520)
..+ +..++.+|||++|+||||+|.. .......+.|.|
T Consensus 200 ----~~~------~~~~~~~~d~~~e~ifppel~~~~~~~~~~~l~~~g------------------------------- 238 (1335)
T 3zyv_A 200 ----KLY------EKKEFQPLDPTQELIFPPELMRMAEESQNTVLTFRG------------------------------- 238 (1335)
T ss_dssp ----CSS------CGGGSCCCCGGGSCCCCHHHHHHHC--CCCCEEEEC-------------------------------
T ss_pred ----ccc------cccccCCCCccccccCCHHHHhhhhccccceeeecC-------------------------------
Confidence 000 1124568999999999999863 112222333332
Q ss_pred CchhhhhhhccccccccCccEEEEcCCHHHHHHHHhcCCCCCCcEEEEecchhhhccCCCC--CCeeeeCCCcccccceE
Q psy7003 497 DLDTCLIELALTPVNVNVEGIWYIVTEVREIFEIFDGLEANQTYMLVGGNTGYGVYRPRVP--VDVYIQIRDIKELRQIF 574 (1520)
Q Consensus 497 ~~~~~~~~~a~~~~~i~~~~~~~rPtSLeEal~ll~~~p~~~~a~lVAGGTdLgv~~k~~~--~~~lIdIs~I~EL~~I~ 574 (1520)
++.+||+|.||+|++++++++| +++||+||||++++++++. .+++|++++|+||+.|+
T Consensus 239 -----------------~~~~w~~P~tl~el~~l~~~~p---~a~lvaGnT~~gl~~~~~~~~~~~~I~~~~v~EL~~i~ 298 (1335)
T 3zyv_A 239 -----------------ERTTWIAPGTLNDLLELKMKHP---SAPLVIGNTYLGLHMKFTDVSYPIIISPARILELFVVT 298 (1335)
T ss_dssp -----------------SSCEEEECSSHHHHHHHHHHCT---TSCBCSSCTTHHHHHC--CCCCSEEECCTTCGGGSCEE
T ss_pred -----------------CCceEecCCCHHHHHHHHHHCC---CCeEEEecccceeeEeecCCCCCeEEEcCcchhHheEE
Confidence 4578999999999999999999 9999999999999977554 48999999999999999
Q ss_pred EeCCeEEEccccCHHHHHHhhhhccCCc--hhhhhHHHHHHHHHhhcchhHhccc---ccCCCCCCCCCcc-----CCcE
Q psy7003 575 TRNGYVLMGSATTLTEAMDYFDRTSKTD--ANFEYMRIMKDHLEQVAHYAVRNFA---LGLSTTEVSPSLW-----SGAR 644 (1520)
Q Consensus 575 ~~~~~L~IGA~vTlsel~e~L~~~~~~~--~~~~~~~~La~al~~IAs~qIRN~A---GNL~~asp~SDL~-----lgA~ 644 (1520)
.++++|+|||++||++++++|++.+++. ...++|+.|.+++++|||+||||+| ||||+++|+||++ +||+
T Consensus 299 ~~~~~l~IGA~vtls~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~fAs~qIRN~aTigGNI~~asPisD~~p~L~A~~A~ 378 (1335)
T 3zyv_A 299 NTKQGLTLGTGLSLTQVKNVLSDVVSRLPKEKTQIYCALLKQLKTLAGQQIRNVASLGGHIISRLPTSDLNPILGIGNCI 378 (1335)
T ss_dssp CCTTEEEEETTCBHHHHHHHHHHHHTTSCTTTCTTHHHHHHHHTTSSCHHHHHHCBHHHHHHTCCTTCSSHHHHGGGTCE
T ss_pred ecCCEEEEcccCcHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHhcchhhcCcccccCceeccCCcchHHHHHHhhCCE
Confidence 9999999999999999999998765432 2356899999999999999999999 9999999999998 9999
Q ss_pred EEEEecCceee--ccccc----------cCce-eeeeeCCCCcc----------------------------------cc
Q psy7003 645 MIQIERAMSQG--SEDFE----------TKQN-LWPLTKPLPKI----------------------------------DA 677 (1520)
Q Consensus 645 V~I~s~~g~R~--l~dFf----------~~EI-tsI~IP~~~~~----------------------------------~~ 677 (1520)
++|.+.+|.|+ ++||| ++|| ++|+||...+. ++
T Consensus 379 l~l~~~~g~r~i~l~d~F~~gyrk~~l~~~eil~si~iP~~~~~~~~~~yK~s~R~d~dia~Vnaa~~v~l~~~~~~v~~ 458 (1335)
T 3zyv_A 379 LNVASTEGIQQIPLNDHFLAGVPDAILKPEQVLISVFVPRSSKWEFVSAFRQAPRQQNAFATVNAGMKVVFKEDTNTITD 458 (1335)
T ss_dssp EEEECSSCEEEEECCTTTSCC----CCCTTCEEEEEEEECCCTTEEEEEEEECSSSSSSCCSEEEEEEEEC----CBCSE
T ss_pred EEEecCCceEEEechHhhhhcccccccCCCcEEEEeeccCCchhhhhhheeeccccccchhhheeeeeEEEecCCCeEeE
Confidence 99999999888 76644 5889 99999986543 67
Q ss_pred cccccc-----------------------------------cccccCCCCCCcHHHHH--------HHHHhhcCCCc---
Q psy7003 678 ITQCAG-----------------------------------EAEYVNDLPQLSEEYFA--------SVVLAERGPAK--- 711 (1520)
Q Consensus 678 arIa~G-----------------------------------El~p~~d~P~gS~EYRr--------KF~L~v~~~~~--- 711 (1520)
+||+|| |+.|..+.|++|++||+ |||++++++++
T Consensus 459 ~~iafGGma~~~~rA~~te~~L~Gk~~~~~~l~~A~~~L~~e~~p~~~~~g~~~~YR~~la~~ll~kf~l~~~~~~~~~~ 538 (1335)
T 3zyv_A 459 LGILYGGIGATVISADKSCRQLIGRCWDEEMLDDAGKMICEEVSLLMAAPGGMEEYRKTLAISFLFMFYLDVLKQLKTRD 538 (1335)
T ss_dssp EEEEEESSSSSCC---CTTGGGTTCBC---CHHHHHHHHHHHHHHC--CTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEecCcCccccHHHHHHHhcCCCCCHHHHHHHHHHHHhhcCCCcCCCCccHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 899999 67889999999999999 99999876532
Q ss_pred ------cccc-cchhhhhcccCCCCcccccccc----CCCCCCCCCCccchhhhcccccccccCCCCCCCcEEEEEEecC
Q psy7003 712 ------IQSI-DSTLALVSCAMSQGSEDFETKQ----NLWPLTKPLPKIDAITQCAGEAEYVNDLPQLSEEYFASVVLAD 780 (1520)
Q Consensus 712 ------i~~~-~s~~~~~~~~~s~g~q~~~~~~----~~~~iGk~~~r~da~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp 780 (1520)
+++. .|+...+++++|+|.|.|++.+ ..+|||||++|+|+..||||+|+|++|++.+|||||++|||||
T Consensus 539 ~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~IGk~v~R~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp 618 (1335)
T 3zyv_A 539 PHKYPDISQKLLHILEDFPLTMPYGMQSFQDVDFQQPLQDPIGRPIMHQSGIKHATGEAVFCDDMSVLPGELFLAVVTSS 618 (1335)
T ss_dssp ------CCHHHHGGGCCCCCC---CCEECCCCCTTSCTTCCTTSCCCCTTHHHHHHTCCCCSTTSCCCTTCEEEEEEECS
T ss_pred cccCCCcchhhcccccccCCCCCCcccccccccccCCCCCCCCCCCcCcChHHHCCCcccccccCCCCCCCEEEEEEeCC
Confidence 3334 7888999999999999999754 3468999999999999999999999999558999999999999
Q ss_pred CCCeEeecCCchhhhcCCCEEEEEeccCCCCCCCCCCCCCCCcccccccCCCCcccccccccCCCCCCCCCCCCCCCCcc
Q psy7003 781 RGPAKIQSIDSTLALAYPGVHTFVHAKDIPGKNLAIPAAWPGQIFEDEKAYPGVHTFVHAKDIPGKNLAIPAAWPGQIFE 860 (1520)
Q Consensus 781 ~ahA~I~sID~s~A~a~PGV~avvt~~Dipg~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 860 (1520)
++||||++||+++|+++|||++|+|++|+|+.|. ..
T Consensus 619 ~aharI~sID~s~A~~~pGV~aV~T~~DiP~~~~--------------------------------------------~~ 654 (1335)
T 3zyv_A 619 KSHAKIISLDASEALASLGVVDVVTARDVPGDNG--------------------------------------------RE 654 (1335)
T ss_dssp SSSEEEEEEECHHHHHSTTEEEEECGGGCSSCCC----------------------------------------------
T ss_pred CCCeEEEEEEhHHHhcCCCeEEEEehhhcCCcCC--------------------------------------------CC
Confidence 9999999999999999999999999999997552 24
Q ss_pred cccccccCeeeecCCEEEEEEECCHHHHHHHcccceEEEeeCCCCCCCHHHHhhcCCccchhhhhccCCCccccCCCCCc
Q psy7003 861 DEKLFAENEVEFAGQIIGAIIADNFKSAYEAAKMVKVVYSDVKTPKLDIKQIVQDGDKARIVEMFKLEPTATKSKFSPDS 940 (1520)
Q Consensus 861 d~~~~a~~~V~y~GqpVaaVvAet~~~A~~Aa~lV~VeYe~l~~~v~di~~Al~~~~~~~i~~~~~~~~g~~~~~~~~~~ 940 (1520)
++++||+++|+|+|||||+|||+|+++|++|+++|+|+||+++++++++++|++.++. ++.....+.||+
T Consensus 655 ~~~~la~d~Vr~~Gq~VA~VvAet~~~A~~Aa~~V~VeYe~l~P~v~~~~~a~~~~~~--~~~~~~~~~Gd~-------- 724 (1335)
T 3zyv_A 655 EESLYAQDEVICVGQIVCAVAADSYAHAQQAAKKVKIVYQDIEPMIVTVQDALQYESF--IGPERKLEQGNV-------- 724 (1335)
T ss_dssp CCCSSCCSEECSTTCEEEEEEESSHHHHHHHHTTCEEEEEECSCCCCSHHHHHHTTCC--EEEEEEEEESCH--------
T ss_pred CcccCCCCeEEEcCCEEEEEEECCHHHHHHHhcCCeEEEEeCCCccCCHHHHhhcccc--cCccccccCCCH--------
Confidence 6789999999999999999999999999999999999999997679999999988753 222333345554
Q ss_pred hhhHHHHhhcccceEEEEEEEECccccCCCCCCeeEEEEe-CC-eEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEeccc
Q psy7003 941 NARWEILEAGKKLFKIKGAAEFGPQYHYTMEGQTALCVPS-ED-GVDIYAASQWVTLVQESVAGVLGLPNNRVNVKTRRI 1018 (1520)
Q Consensus 941 ~~~~~~~~~a~~~~vveg~~~~~~q~H~~mEp~~a~A~~~-ed-~l~V~~sTQ~p~~vq~~vA~~LGlp~~kVrV~~~~v 1018 (1520)
+++|++++ +++|++|++++|+|+||||++|+|+|+ +| +|+||+|||+|+.+|..+|++||||.+||||+++++
T Consensus 725 ---~~af~~a~--~vve~~y~~~~~~h~~mEp~~~~a~~~~edg~l~v~~sTQ~p~~~r~~lA~~Lglp~~kVrV~~~~v 799 (1335)
T 3zyv_A 725 ---EEAFQCAD--QILEGEVHLGGQEHFYMETQSVRVVPKGEDKEMDIYVSSQDAAFTQEMVARTLGIPKNRINCHVKRV 799 (1335)
T ss_dssp ---HHHTTSSS--EEEEEEEEECCBCCCCSSCCEEEEEECSSTTCEEEEECCSCHHHHHHHHHHHHTCCGGGEEEEESCC
T ss_pred ---HHHHhhCC--eEEEEEEEECceeccccCCcceEEEEECCCCeEEEEECCcCHHHHHHHHHHHHCCCCceEEEEeCCc
Confidence 35689999 999999999999999999999999997 34 699999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCchHHHHHHHHHHhcCCcEEEEcChHHHHhccCCCCcEEEEEeeeccCCCccccccCCCccchhhhhhhh
Q psy7003 1019 GGGYGAKLSRSCYPAVIAAVCSNVINKPVRIVMSIESMMGALGGRYPVYATYEIGTIGGNLSIKHEHPEFSSDVFLLLEV 1098 (1520)
Q Consensus 1019 GGgFG~K~~~~~~~~~~AAlaA~~~gRPVrl~~sRee~m~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 1098 (1520)
|||||+|.+.+...+++||++|+++||||||+|||+|+|.++++||++.++|
T Consensus 800 GGGFG~K~~~~~~~~~~aAlaA~~~gRPVK~~~tR~E~~~~~~~R~~~~~~~---------------------------- 851 (1335)
T 3zyv_A 800 GGAFGGKASKPGLLASVAAVAAQKTGRPIRFILERRDDMLITGGRHPLLGKY---------------------------- 851 (1335)
T ss_dssp SCCTTTTSSHHHHHHHHHHHHHHHHCSCEEEECCHHHHHHHSCCBCCEEEEE----------------------------
T ss_pred cCCCCccccCchHHHHHHHHHHHHhCCCEEEEECHHHHHhhcCCCCchheEE----------------------------
Confidence 9999999976555677899999999999999999999999999999999888
Q ss_pred ccceeeeccccccccccCcchhhhhccccceeeeeecccccccccccccceeeeCCCCcEEEEEEEEEEecCCCcccchh
Q psy7003 1099 VGATITIRDTFGLEQTVSPEEYLSIDMNKKVITYITFCPLIKNSYYLRTYKCGVDKNGVIQNLSTVFNVDKGMTLNENGF 1178 (1520)
Q Consensus 1099 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~g~d~dG~i~al~~~~~~d~Ga~~~~~~~ 1178 (1520)
|+|+|+||+|+|++++++.|+|+|.+.+..
T Consensus 852 --------------------------------------------------~~g~d~dG~i~al~~~~~~d~Ga~~~~~~~ 881 (1335)
T 3zyv_A 852 --------------------------------------------------KIGFMNNGKIKAADIQLYINGGCTPDDSEL 881 (1335)
T ss_dssp --------------------------------------------------EEEECTTSCEEEEEEEEEEECCSSCTTHHH
T ss_pred --------------------------------------------------EEEecCCCCeeeeeeeeeeccccccccccc
Confidence 999999999999999999999999998887
Q ss_pred hhHhhcccCCCCCCCCceEEEEEEEecCCCCCcccCCCCchhHHHHHHHHHHHHHHHhCCCHHHHHHHhcCC--------
Q psy7003 1179 LHVRFGLGQASIYDPSTFRVVANAVRTDKPTYGFTRSPGACEVTAFIEHVMDHIATVVNRDPTDVRIANLRN-------- 1250 (1520)
Q Consensus 1179 ~~~~~~~~~~~~Y~ipn~r~~~~~v~TN~p~~ga~Rg~G~~q~~fa~E~~mD~iA~~lg~DP~e~R~~Nl~~-------- 1250 (1520)
+..+...+..++|++||++++++.|+||+|++|||||||.+|++|++|++||++|++|||||+|||++|++.
T Consensus 882 ~~~~~~~~~~g~Y~ipn~~~~~~~v~TN~~~~~a~RG~G~pq~~fa~E~~mD~lA~~lg~DP~elR~~N~~~~~~~~~~g 961 (1335)
T 3zyv_A 882 VIEYALLKLENAYKIPNLRVRGRVCKTNLPSNTAFRGFGFPQGAFVTETCMSAVAAKCRLPPEKVRELNMYRTIDRTIHN 961 (1335)
T ss_dssp HHHHHHHHTTTTBCCSEEEEEEEEECCSSCCCCCCTTTTHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHBCCSSCBCTTS
T ss_pred hhhhhhhhccCcceeeEEEEEEEEEeccCCCCCcccCCCchhheeEecchhhHHHHHhCCCHHHHHHHhccCCCccccCC
Confidence 777776678999999999999999999999999999999999999999999999999999999999999972
Q ss_pred -----chHHHHHHHHHhccChHHHHHHHHHHhhhhhhhhhhhhhhhhccCCccccccceEEEEeccCCC----CcceEEE
Q psy7003 1251 -----EDVKKFYQQFRGSVKYKERRDAIETFNAVRVLISQYSLRHCFQNNRWRKRGISAVVTLFPLGFY----DVSYAIL 1321 (1520)
Q Consensus 1251 -----~~~~~~~~~~~~~~~~~~r~~~~~~~n~~~~~~~~~~~~~~~~~~~~~krGig~~~~~~~~g~~----~~~~a~v 1321 (1520)
..+.++|+++.+.++|.+|+++.+.||+ .++|+|||+|+++..++.|+. +++.+.|
T Consensus 962 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~rGi~~~~~~~~~g~~~~~~~~~~a~v 1026 (1335)
T 3zyv_A 962 QEFDPTNLLQCWEACVENSSYYNRKKAVDEFNQ---------------QRFWKKRGIAIIPMKFSVGFPKTFYYQAAALV 1026 (1335)
T ss_dssp CBC--CCHHHHHHHHHHHTTHHHHHHHHHHHHH---------------HCSSSEEEEEEEEEEEECCCSSGGGGCEEEEE
T ss_pred cccccccHHHHHHHHHHhhhHHHHHHhhhhhhc---------------cCcceeeeeEEEEEEeeccCCcccccceeEEE
Confidence 3588999999999999999999999998 899999999999999888764 4688999
Q ss_pred EEEcCCCeEEEEecCcccCcchHHHHHHHHHHHhCCCCCcEEEecCCCCCCCCCCCCcccccccchHHHHHHHHHHHHHH
Q psy7003 1322 SVFRRDATVAITTSGIEIGQGLHTKVAQACAYELGIPIEKIVLKPAQNNIFPNAANTGGSTASDNAARCILLCCQELKTR 1401 (1520)
Q Consensus 1322 ~v~~~DGsV~i~~g~~e~GQG~~T~~aQiaA~~Lgip~e~I~v~~~dT~~~p~~~~t~gS~~t~~~g~Av~~Ac~~l~~r 1401 (1520)
+| ++||+|+|.+|++|||||++|+++||||++||||+|+|+|..+||+.+|++++|+|||+++++|.||++||++|++|
T Consensus 1027 ~i-~~DGsv~v~~G~~e~GQG~~T~~aQiaAe~LGip~e~I~v~~~DT~~~P~~~gt~gSr~t~~~G~Av~~Aa~~l~~r 1105 (1335)
T 3zyv_A 1027 QI-YTDGSVLVAHGGVELGQGINTKMIQVASRELKIPMSYIHLDEMSTVTVPNTVTTGASTGADVNGRAVQNACQILMKR 1105 (1335)
T ss_dssp EE-CTTSCEEECBSCCCSSSCHHHHHHHHHHHHHTSCGGGEEECCEETTTSCSCCCSCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred EE-eCCCcEEEEECCcCCCCchhHHHHHHHHHHhCCCHHHEEEecCCcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHH
Confidence 97 67999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhc--CCCHHHHHHHHhhcCceeEEEEEeecc-------CCCCCCCccccceEEEEEEEEECCCCcEEEEEEEEEE
Q psy7003 1402 LMPYMDK--GKSWEKTISDAFERGVDLQVTKSVSSQ-------QTPDLLPMYTIPTAAATEVEVDLLTGQHQILRVDILE 1472 (1520)
Q Consensus 1402 l~~~~~~--~~~w~~~~~~a~~~gv~l~~~~~~~~~-------~~~~~~~~~~~~ga~~aEVEVD~~TG~v~V~r~~~~~ 1472 (1520)
|++++++ ..+|++++..++.++++|++.++|... ...+..+.|++|||+++|||||++||+++|+|+++++
T Consensus 1106 l~~~a~~~~~~~~~~~~~~~~~~~v~l~a~~~~~~~~~~~~~~~g~g~~~~~~~~ga~~aEVeVD~~TG~v~V~r~~~v~ 1185 (1335)
T 3zyv_A 1106 LEPIIKQNPSGTWEEWVKEAFVQSISLSATGYFRGYQADMDWEKGEGDIFPYFVFGAACSEVEIDCLTGAHKNIRTDIVM 1185 (1335)
T ss_dssp TTTHHHHSTTSCHHHHHHHHHHTTCCCEEEEEECCCCCEEETTTTEEECCSCEEEEEEEEEEEECTTTCCEEEEEEEEEE
T ss_pred HHHHHhhCCCCCHHHHHHHhhhcccceeEEEEeccCcCCcCcccCcCCcCccCcceEEEEEEEEECCCCcEEEEEEEEEE
Confidence 9999876 789999999999999999999888531 1123456788999999999999999999999999999
Q ss_pred ecCcccChHHHhHHhHhHHHHHHHHHHccceeeeCCCceeecCCCCC
Q psy7003 1473 DTGQSINPAIDIGQIQGAFIMGIGLWTFEHQIHDKRTGALLTNRTWV 1519 (1520)
Q Consensus 1473 D~G~~INP~~~~GQIeGg~vqGiG~aL~Ee~~~d~~~G~llt~~~w~ 1519 (1520)
|||++|||.+++||||||++||||++|+||+.||+ +|+++|+|.|+
T Consensus 1186 D~G~vINP~~~~gQieGG~vqGiG~AL~Ee~~~d~-~G~~~t~~~~d 1231 (1335)
T 3zyv_A 1186 DGSFSINPAVDIGQIEGAFVQGLGLYTLEELKYSP-EGVLYTRGPHQ 1231 (1335)
T ss_dssp CCSSCSCHHHHHHHHHHHHHHHHHHHHTCCCCBCT-TCCBCCCSTTT
T ss_pred ecCcccCHHHHHHHHHHHHHHHHHHHHhCCCEECC-CCcCCCCChhh
Confidence 99999999999999999999999999999999995 79999999985
No 2
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=100.00 E-value=5.2e-220 Score=2156.31 Aligned_cols=1077 Identities=29% Similarity=0.452 Sum_probs=949.5
Q ss_pred EEEEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEECCccCCCCcccccccccchhhHHhcCCc
Q psy7003 21 TVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTSSHPVTGVDSTYSVNACLVLVHMCGGW 100 (1520)
Q Consensus 21 ~~~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~~~~~~~~~~~~~~~v~scl~~~~~~~g~ 100 (1520)
.|+|+|||+++++. +++|++|||||||+++||||||+||++|+||||||+|+++|+.++++.+++|||||+|+++++|+
T Consensus 5 ~i~~~vNg~~~~~~-~~~p~~~ll~~LR~~~~ltgtk~gC~~g~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~ 83 (1332)
T 3unc_A 5 ELVFFVNGKKVVEK-NADPETTLLAYLRRKLGLRGTKLGCGEGGCGACTVMLSKYDRLQDKIIHFSANACLAPICTLHHV 83 (1332)
T ss_dssp CEEEEETTEEEEET-TCCTTCBHHHHHHHTSCCTTSCCSCSSSSSCTTEEEEEEEETTTTEEEEEEEETTTCBGGGCTTC
T ss_pred cEEEEECCEEEEee-cCCCCCCHHHHHhhhcCCCCcCCCcCCCCCCCcEEEEecccccccccCCeEeehHHhhHHHhCCC
Confidence 59999999999863 79999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCCCCCCCCHHHHHHHHhCCCCCCCCchhHHHHHhhhhccccccccCCcchhhHHhhhhhccCCCcchhHHHH
Q psy7003 101 AITTVEGLGSKKKGYHNVQTRLATMNGSQCGYCSPGMVMAMYSRHRLTASTMCGHNFTKTLLLQMYCIFLPPFSLEVLFV 180 (1520)
Q Consensus 101 ~i~T~eg~~~~~~~~h~vq~~~~~~~~~qcg~ctpg~vm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (1520)
+|+|||||+++++.|||||++|+++|++|||||||||||+||+
T Consensus 84 ~i~TiEgl~~~~~~~hpvq~a~~~~~~~QCG~CtpG~vms~~~------------------------------------- 126 (1332)
T 3unc_A 84 AVTTVEGIGSTKTRLHPVQERIAKSHGSQCGFCTPGIVMSMYT------------------------------------- 126 (1332)
T ss_dssp EEECGGGTCCTTSCCCHHHHHHHHTTCCSSCTTHHHHHHHHHH-------------------------------------
T ss_pred EEEEeccccCCCCCcCHHHHHHHHhCCCCCCCCccHHHHHHHH-------------------------------------
Confidence 9999999998667899999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCCHHHHHHHhcCCccCCCCcHHHHHHHHHhhhhcCcccccccccccccccccccccccccccc
Q psy7003 181 ILLIFVIVSFLEGKKYKVTKSEVEGALGGNICRCTGFRPILDAFQSFSCDASDSVQRKCADIEVRGKRDFISHESLGTQL 260 (1520)
Q Consensus 181 ~~~~~~~~~~l~~~~~~~~~~~i~~~~~gn~crctgy~~i~~a~~~~~~~~~~~~~~~~~d~e~~~~~~~~~~~~~~~~~ 260 (1520)
||++++ .||++||+++|+|||||||||++|++|+++++.+.+ +|.++++ +
T Consensus 127 ---------ll~~~~-~p~~~~i~~~l~gnlCRCtgy~~i~~a~~~~~~~~~-----~c~~~~~------------g--- 176 (1332)
T 3unc_A 127 ---------LLRNQP-EPTVEEIEDAFQGNLCRCTGYRPILQGFRTFAKNGG-----CCGGNGN------------N--- 176 (1332)
T ss_dssp ---------HHHHCS-SCCHHHHHHTTTTCCCSSSCSHHHHHHHGGGC--------------------------------
T ss_pred ---------HHHhcC-CCCHHHHHHHHhCCcccCCCchhHHHHHHHHhhcCC-----ccccccc------------C---
Confidence 888888 899999999999999999999999999999997752 5666543 0
Q ss_pred cccccccchhhhhhhhhcccccccccccccccCCCcceEEEECCEEEEecccCCCCcchhHHHHhhhcccCccccccCCC
Q psy7003 261 LDWAFDTLVFSVLEFRLATLIIVPILLPRLFSDTSSTVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGG 340 (1520)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~f~~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~~g~ 340 (1520)
+.+|.++.
T Consensus 177 ------------------------------------------------------------------------~~cc~~~~ 184 (1332)
T 3unc_A 177 ------------------------------------------------------------------------PNCCMNQK 184 (1332)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------------------------------------------------------------------------Cccccccc
Confidence 01233221
Q ss_pred ccceeeeeccCCCcccccccccccccccccccCccccccCCccchhhhhcccCCCCcccccccccccccccccccccCCC
Q psy7003 341 CGVCTVTVTSSHPVTGVDSTYSVNACGDRCFTRNICRCTGFRPILDAFQSFSCDASDSVQRKCADIEVRGKRDFISHEGL 420 (1520)
Q Consensus 341 cGactV~v~~~hpvq~~~~~~~~~~Cg~~C~~gNLCRCTgyrpIlda~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (1520)
..|. . + -| .
T Consensus 185 -----------------------~~~~----~-~--~~-------------------------~---------------- 193 (1332)
T 3unc_A 185 -----------------------KDHT----V-T--LS-------------------------P---------------- 193 (1332)
T ss_dssp ---------------------------------------------------------------C----------------
T ss_pred -----------------------cccc----c-c--cc-------------------------c----------------
Confidence 0010 0 0 00 0
Q ss_pred CCCCCChhhhcccccccccCCCCCCccccccc-cCCCCccceeecCCCCCCcccccccccccccccccccccccCCCCch
Q psy7003 421 PEPEYDPTYRKNLAVSLFYKSHINPSIHNRTV-MGRGDVRSLFFGSSTLGEVPTRYKLDLMGSCKLKTKLDQSEDSNDLD 499 (1520)
Q Consensus 421 ~~~~~~~~~~~~l~~~~~y~~s~epi~~~~l~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 499 (1520)
..+ +..++.+|||++|+||||+|+ +.......+.+.+
T Consensus 194 --~~~------~~~~~~~~d~~~e~ifpp~L~~~~~~~~~~l~~~~---------------------------------- 231 (1332)
T 3unc_A 194 --SLF------NPEEFMPLDPTQEPIFPPELLRLKDVPPKQLRFEG---------------------------------- 231 (1332)
T ss_dssp --CSC------CGGGSCCCCGGGSCCCCHHHHHHTTSCCCCEEEEC----------------------------------
T ss_pred --ccc------cccccCCCCccccccCCHHHhhhccccCCceEecC----------------------------------
Confidence 000 112356899999999999997 3322333344432
Q ss_pred hhhhhhccccccccCccEEEEcCCHHHHHHHHhcCCCCCCcEEEEecchhhhccCCC--CCCeeeeCCCcccccceEEeC
Q psy7003 500 TCLIELALTPVNVNVEGIWYIVTEVREIFEIFDGLEANQTYMLVGGNTGYGVYRPRV--PVDVYIQIRDIKELRQIFTRN 577 (1520)
Q Consensus 500 ~~~~~~a~~~~~i~~~~~~~rPtSLeEal~ll~~~p~~~~a~lVAGGTdLgv~~k~~--~~~~lIdIs~I~EL~~I~~~~ 577 (1520)
++.+||+|+||+||++++++++ ++++|||||++++++|.+ .++.+|||++|+||+.|+.++
T Consensus 232 --------------~~~~~~~P~sl~ea~~ll~~~~---~a~lvaGgT~l~~~~k~~~~~~~~lIdl~~i~EL~~I~~~~ 294 (1332)
T 3unc_A 232 --------------ERVTWIQASTLKELLDLKAQHP---EAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHGP 294 (1332)
T ss_dssp --------------SSCEEEECCSHHHHHHHHHHCT---TCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEECS
T ss_pred --------------CceEEEccCCHHHHHHHHhhCC---CCEEEEeCcHHHHHhhcCCCCCCeEEEcCCCHHhCceEEeC
Confidence 3568999999999999999998 899999999999997654 458899999999999999999
Q ss_pred CeEEEccccCHHHHHHhhhhccC--CchhhhhHHHHHHHHHhhcchhHhccc---ccCCCCCCCCCcc-----CCcEEEE
Q psy7003 578 GYVLMGSATTLTEAMDYFDRTSK--TDANFEYMRIMKDHLEQVAHYAVRNFA---LGLSTTEVSPSLW-----SGARMIQ 647 (1520)
Q Consensus 578 ~~L~IGA~vTlsel~e~L~~~~~--~~~~~~~~~~La~al~~IAs~qIRN~A---GNL~~asp~SDL~-----lgA~V~I 647 (1520)
++|+|||++|++++++.+++.++ ....+++++.|++++++||++||||+| ||||+++|+||++ +||+|+|
T Consensus 295 ~~l~IGA~vtl~~l~~~l~~~~~~~~~~~~~~~p~L~~a~~~ias~qIRN~aTiGGNI~~asp~sD~~~~LlAl~A~v~l 374 (1332)
T 3unc_A 295 EGISFGAACALSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITASPISDLNPVFMASGTKLTI 374 (1332)
T ss_dssp SEEEEETTCBHHHHHHHHHHHHHHSCGGGCHHHHHHHHHHHTSSCHHHHHHCBHHHHHHHCCTTCSSHHHHHHTTCEEEE
T ss_pred CEEEEEecChHHHHHHHHHHHhhhccccccchhHHHHHHHHHhCCHHHhceeeccceecccCCchhHHHHHHHcCCEEEE
Confidence 99999999999999997765421 112457899999999999999999999 9999999999999 9999999
Q ss_pred EecCceee--ccc-cc---------cCce-eeeeeCCCCcc----------------------------------ccccc
Q psy7003 648 IERAMSQG--SED-FE---------TKQN-LWPLTKPLPKI----------------------------------DAITQ 680 (1520)
Q Consensus 648 ~s~~g~R~--l~d-Ff---------~~EI-tsI~IP~~~~~----------------------------------~~arI 680 (1520)
.+.+|.|+ ++| || ++|| ++|+||.+... +++||
T Consensus 375 ~~~~G~R~ipl~d~Ff~g~~~t~L~~~Eil~~I~iP~~~~~~~~~~~K~~~R~~~d~A~V~~A~~v~~~~~~~~i~~~rI 454 (1332)
T 3unc_A 375 VSRGTRRTVPMDHTFFPSYRKTLLGPEEILLSIEIPYSREDEFFSAFKQASRREDDIAKVTCGMRVLFQPGSMQVKELAL 454 (1332)
T ss_dssp EETTEEEEEECCGGGCCSTTCCSCCTTCEEEEEEEECCCTTEEEEEEEECSSSSSCCCSEEEEEEEEESTTSSBEEEEEE
T ss_pred EeCCCcEEEEhHHhhhhccccccCCCCcEEEEEEecCCCCCcceEEEEEecCCCCCcceEEEEEEEEEcCCCCeEEEEEE
Confidence 99999888 888 99 5899 99999987542 25899
Q ss_pred ccc-----------------------------------cccccCCCCCCcHHHHH--------HHHHhhcCCC-------
Q psy7003 681 CAG-----------------------------------EAEYVNDLPQLSEEYFA--------SVVLAERGPA------- 710 (1520)
Q Consensus 681 a~G-----------------------------------El~p~~d~P~gS~EYRr--------KF~L~v~~~~------- 710 (1520)
+|| ++.++.+.|++|++||+ |||+++.+++
T Consensus 455 a~Ggva~~p~ra~~~E~~L~Gk~~~~~~l~~A~~~l~~~~~~~~~d~~gs~eYR~~La~~ll~r~l~~v~~~~~~~~~~~ 534 (1332)
T 3unc_A 455 CYGGMADRTISALKTTQKQLSKFWNEKLLQDVCAGLAEELSLSPDAPGGMIEFRRTLTLSFFFKFYLTVLKKLGKDSKDK 534 (1332)
T ss_dssp EEESSSSSCEECHHHHHTTTTCBSSHHHHHHHHHHHHHHTCCCTTCTTCCHHHHHHHHHHHHHHHHHHHHHHHCC-----
T ss_pred EEECCCCccccHHHHHHHhcCCCCcHHHHHHHHHHHHhhCCCCcccccCCHHHHHHHHHHHHHHHHHHHHhhhccccccc
Confidence 999 45556777899999999 8999887643
Q ss_pred --ccccc-cchhhhhcccCCCCccccc----cccCCCCCCCCCCccchhhhcccccccccCCCCCCCcEEEEEEecCCCC
Q psy7003 711 --KIQSI-DSTLALVSCAMSQGSEDFE----TKQNLWPLTKPLPKIDAITQCAGEAEYVNDLPQLSEEYFASVVLADRGP 783 (1520)
Q Consensus 711 --~i~~~-~s~~~~~~~~~s~g~q~~~----~~~~~~~iGk~~~r~da~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~ah 783 (1520)
.+++. .|+...++||+|+|+|.|+ +++..|+|||+++|+|+..||||+|+|++|++.+|||||+++||||++|
T Consensus 535 ~~~~~~~~~s~~~~~~~~~~~g~q~~~~~~~~~~~~~~iG~~v~R~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~ah 614 (1332)
T 3unc_A 535 CGKLDPTYTSATLLFQKDPPANIQLFQEVPNGQSKEDTVGRPLPHLAAAMQASGEAVYCDDIPRYENELFLRLVTSTRAH 614 (1332)
T ss_dssp ---CCTTTGGGGCCCCCCCCEEEEECCCCCTTCCTTCCTTSCCCCTTHHHHHHTCSCCGGGSCCBTTCEEEEEEECSSSS
T ss_pred cCCCChhhccccccccCCCCCceeeeecccccccccCcCCCCCcCcchHHhcccccccccccCCCCCcEEEEEEeCCCCC
Confidence 25566 8999999999999999999 6778999999999999999999999999999547999999999999999
Q ss_pred eEeecCCchhhhcCCCEEEEEeccCCCCCCCCCCCCCCCcccccccCCCCcccccccccCCCCCCCCCCCCCCCCccccc
Q psy7003 784 AKIQSIDSTLALAYPGVHTFVHAKDIPGKNLAIPAAWPGQIFEDEKAYPGVHTFVHAKDIPGKNLAIPAAWPGQIFEDEK 863 (1520)
Q Consensus 784 A~I~sID~s~A~a~PGV~avvt~~Dipg~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~~ 863 (1520)
|+|++||+++|+++|||++|+|++|+|+.|.+ | ...|+|
T Consensus 615 a~I~sID~s~A~~~pGV~~V~t~~Dip~~~~~----------------------------------------g-~~~d~~ 653 (1332)
T 3unc_A 615 AKIKSIDVSEAQKVPGFVCFLSADDIPGSNET----------------------------------------G-LFNDET 653 (1332)
T ss_dssp EEEEEEECTTGGGSTTEEEEECGGGCSSCSEE----------------------------------------S-TTSCEE
T ss_pred eeEeeechHHHhcCCCEEEEEeccccCCcccC----------------------------------------C-CCCCcc
Confidence 99999999999999999999999999986632 1 135789
Q ss_pred ccccCeeeecCCEEEEEEECCHHHHHHHcccceEEEeeCCCCCCCHHHHhhcCCccchhhhhccCCCccccCCCCCchhh
Q psy7003 864 LFAENEVEFAGQIIGAIIADNFKSAYEAAKMVKVVYSDVKTPKLDIKQIVQDGDKARIVEMFKLEPTATKSKFSPDSNAR 943 (1520)
Q Consensus 864 ~~a~~~V~y~GqpVaaVvAet~~~A~~Aa~lV~VeYe~l~~~v~di~~Al~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~ 943 (1520)
+|++++|+|+|||||+|||+|+|+|++|+++|+|+||++| +++|+++|++++++. +.....+.||+
T Consensus 654 ~la~~~Vry~GqpVa~VvA~t~~~A~~Aa~~v~Veye~lp-~v~~~~~A~~~~~~~--~~~~~~~~Gd~----------- 719 (1332)
T 3unc_A 654 VFAKDTVTCVGHIIGAVVADTPEHAERAAHVVKVTYEDLP-AIITIEDAIKNNSFY--GSELKIEKGDL----------- 719 (1332)
T ss_dssp SSCCSEECSTTCEEEEEEESSHHHHHHHHHTCEEEEEECC-CCCSHHHHHHTTCEE--EEEEEEEESCH-----------
T ss_pred cccCceEEEcCCeEEEEEECCHHHHHHHhhcCceEEEcCC-CcCCHHHHhhccCcc--CCccccccCCH-----------
Confidence 9999999999999999999999999999999999999997 699999999887632 11122234543
Q ss_pred HHHHhhcccceEEEEEEEECccccCCCCCCeeEEEEe--CCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCC
Q psy7003 944 WEILEAGKKLFKIKGAAEFGPQYHYTMEGQTALCVPS--EDGVDIYAASQWVTLVQESVAGVLGLPNNRVNVKTRRIGGG 1021 (1520)
Q Consensus 944 ~~~~~~a~~~~vveg~~~~~~q~H~~mEp~~a~A~~~--ed~l~V~~sTQ~p~~vq~~vA~~LGlp~~kVrV~~~~vGGg 1021 (1520)
+++|++++ ++||++|++++|+|+||||++|+|+|+ +|+|+||+|||+|+.+|..+|++||||.+||||+++++|||
T Consensus 720 ~~afa~A~--~vve~~y~~~~~~H~~mEp~~~~A~~~~~~g~l~v~~sTQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGg 797 (1332)
T 3unc_A 720 KKGFSEAD--NVVSGELYIGGQDHFYLETHCTIAIPKGEEGEMELFVSTQNAMKTQSFVAKMLGVPVNRILVRVKRMGGG 797 (1332)
T ss_dssp HHHHHHCS--EEEEEEEEECCBCCCCSSCCEEEEEECSSTTCEEEEECCSCHHHHHHHHHHHHTCCGGGEEEEECCCSCC
T ss_pred hHHhhcCC--eEeeeeEEeCCccccCCCCceEEEEEeCCCCeEEEEECCCCHHHHHHHHHHHhCCCchhEEEEeCCCCCC
Confidence 35799999 999999999999999999999999998 45799999999999999999999999999999999999999
Q ss_pred CCCCCCCCchHHHHHHHHHHhcCCcEEEEcChHHHHhccCCCCcEEEEEeeeccCCCccccccCCCccchhhhhhhhccc
Q psy7003 1022 YGAKLSRSCYPAVIAAVCSNVINKPVRIVMSIESMMGALGGRYPVYATYEIGTIGGNLSIKHEHPEFSSDVFLLLEVVGA 1101 (1520)
Q Consensus 1022 FG~K~~~~~~~~~~AAlaA~~~gRPVrl~~sRee~m~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 1101 (1520)
||+|...+...+++||++|+++||||||+|||+|+|.++++||++.++|
T Consensus 798 FG~K~~~~~~~~~~aAlaA~~~gRPVk~~~tR~e~~~~~~~R~~~~~~~------------------------------- 846 (1332)
T 3unc_A 798 FGGKETRSTLVSVAVALAAYKTGHPVRCMLDRNEDMLITGGRHPFLARY------------------------------- 846 (1332)
T ss_dssp TTTTSSTTHHHHHHHHHHHHHHSSCEEEECCHHHHHHHSCCBCCEEEEE-------------------------------
T ss_pred CCCCCcccchHHHHHHHHHHHhCCCEEEEecHHHHHhhcCCCCceeEEE-------------------------------
Confidence 9999986555678899999999999999999999999999999999888
Q ss_pred eeeeccccccccccCcchhhhhccccceeeeeecccccccccccccceeeeCCCCcEEEEEEEEEEecCCCcccchhhhH
Q psy7003 1102 TITIRDTFGLEQTVSPEEYLSIDMNKKVITYITFCPLIKNSYYLRTYKCGVDKNGVIQNLSTVFNVDKGMTLNENGFLHV 1181 (1520)
Q Consensus 1102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~g~d~dG~i~al~~~~~~d~Ga~~~~~~~~~~ 1181 (1520)
|+|+|+||+|+|++++++.|+|+|.+.+..+..
T Consensus 847 -----------------------------------------------~~g~d~dG~i~a~~~~~~~d~Ga~~~~~~~v~~ 879 (1332)
T 3unc_A 847 -----------------------------------------------KVGFMKTGTIVALEVDHYSNAGNSRDLSHSIME 879 (1332)
T ss_dssp -----------------------------------------------EEEECTTSCEEEEEEEEEEEEESSCTTHHHHHH
T ss_pred -----------------------------------------------EEEECCCCcEEEEEEEEEEcCCcCccccHHHHH
Confidence 999999999999999999999999988766666
Q ss_pred hhcccCCCCCCCCceEEEEEEEecCCCCCcccCCCCchhHHHHHHHHHHHHHHHhCCCHHHHHHHhcCC-----------
Q psy7003 1182 RFGLGQASIYDPSTFRVVANAVRTDKPTYGFTRSPGACEVTAFIEHVMDHIATVVNRDPTDVRIANLRN----------- 1250 (1520)
Q Consensus 1182 ~~~~~~~~~Y~ipn~r~~~~~v~TN~p~~ga~Rg~G~~q~~fa~E~~mD~iA~~lg~DP~e~R~~Nl~~----------- 1250 (1520)
+...+..++|++||++++++.|+||+|+++||||||.+|++|++|++||++|++|||||+|||++|++.
T Consensus 880 ~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~~a~Rg~G~~q~~fa~E~~mDelA~~lG~DP~e~R~~N~~~~g~~t~~g~~~ 959 (1332)
T 3unc_A 880 RALFHMDNCYKIPNIRGTGRLCKTNLSSNTAFRGFGGPQALFIAENWMSEVAVTCGLPAEEVRWKNMYKEGDLTHFNQRL 959 (1332)
T ss_dssp HHHHTTTTTBCCSSEEEEEEEEECSSCCCCCCTTTTHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHBCCTTCBCTTCCBC
T ss_pred HHHHhcCCCccCCcEEEEEEEEeCCCCCCCcccCCCcHHHHHHHHHHHHHHHHHHCcCHHHHHHHhcCCCCCcCCCCccc
Confidence 666678999999999999999999999999999999999999999999999999999999999999983
Q ss_pred --chHHHHHHHHHhccChHHHHHHHHHHhhhhhhhhhhhhhhhhccCCccccccceEEEEeccCCC----CcceEEEEEE
Q psy7003 1251 --EDVKKFYQQFRGSVKYKERRDAIETFNAVRVLISQYSLRHCFQNNRWRKRGISAVVTLFPLGFY----DVSYAILSVF 1324 (1520)
Q Consensus 1251 --~~~~~~~~~~~~~~~~~~r~~~~~~~n~~~~~~~~~~~~~~~~~~~~~krGig~~~~~~~~g~~----~~~~a~v~v~ 1324 (1520)
..+.+||+++++.++|++|+++++.||+ +|+|+|||||++++.|++|+. +++.|.|+|
T Consensus 960 ~~~~l~~~l~~~~~~~~~~~r~~~~~~~~~---------------~~~~~~rGig~~~~~~g~g~~~~~~~~~~a~v~l- 1023 (1332)
T 3unc_A 960 EGFSVPRCWDECLKSSQYYARKSEVDKFNK---------------ENCWKKRGLCIIPTKFGISFTVPFLNQAGALIHV- 1023 (1332)
T ss_dssp CSCCHHHHHHHHHHHTTHHHHHHHHHHHHH---------------HCSSEEEEEEEEEEEEEESCSSGGGCEEEEEEEE-
T ss_pred CCCCHHHHHHHHHHhcCHHHHHHHHHHhhh---------------cCCcceeeEEEEEEEeeeeccCCCCCcceEEEEE-
Confidence 2589999999999999999999999998 899999999999999998864 578999997
Q ss_pred cCCCeEEEEecCcccCcchHHHHHHHHHHHhCCCCCcEEEecCCCCCCCCCCCCcccccccchHHHHHHHHHHHHHHhhh
Q psy7003 1325 RRDATVAITTSGIEIGQGLHTKVAQACAYELGIPIEKIVLKPAQNNIFPNAANTGGSTASDNAARCILLCCQELKTRLMP 1404 (1520)
Q Consensus 1325 ~~DGsV~i~~g~~e~GQG~~T~~aQiaA~~Lgip~e~I~v~~~dT~~~p~~~~t~gS~~t~~~g~Av~~Ac~~l~~rl~~ 1404 (1520)
++||+|+|.+|++|||||++|+++||||++||||+|+|+|..+||+.+||+++|+|||+|+++|.||++||++||+||++
T Consensus 1024 ~~DGsv~v~~g~~e~GQG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~P~~~~t~aSr~t~~~G~Av~~A~~~l~~rl~~ 1103 (1332)
T 3unc_A 1024 YTDGSVLVSHGGTEMGQGLHTKMVQVASKALKIPISKIYISETSTNTVPNSSPTAASVSTDIYGQAVYEACQTILKRLEP 1103 (1332)
T ss_dssp CTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTSCGGGEECCCEETTTSCSCCCSCTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCeEEEEECCcCCCCCHHHHHHHHHHHHhCCCHHHEEEEcCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhc--CCCHHHHHHHHhhcCceeEEEEEeeccC-------CCCCCCccccceEEEEEEEEECCCCcEEEEEEEEEEecC
Q psy7003 1405 YMDK--GKSWEKTISDAFERGVDLQVTKSVSSQQ-------TPDLLPMYTIPTAAATEVEVDLLTGQHQILRVDILEDTG 1475 (1520)
Q Consensus 1405 ~~~~--~~~w~~~~~~a~~~gv~l~~~~~~~~~~-------~~~~~~~~~~~ga~~aEVEVD~~TG~v~V~r~~~~~D~G 1475 (1520)
++++ ..+|++++..++..++.|+++++|.... ..+.++.|++|||+++|||||++||+++|+|+++++|||
T Consensus 1104 ~aa~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~Ga~~aEVeVD~~TG~v~V~r~~~v~D~G 1183 (1332)
T 3unc_A 1104 FKKKNPDGSWEDWVMAAYQDRVSLSTTGFYRTPNLGYSFETNSGNAFHYFTYGVACSEVEIDCLTGDHKNLRTDIVMDVG 1183 (1332)
T ss_dssp HHHHCTTSCHHHHHHHHHHTTCCCEEEEEEECCSCCCBTTTTBSCSCSEEEEEEEEEEEEEETTTCCEEEEEEEEEEECB
T ss_pred HHhhCCCCCHHHHHHHhhccCCceEEEEEEecCCcccccccCCCCCCcccceEEEEEEEEEECCCCcEEEEEEEEEEeCC
Confidence 8875 5799999999999899999998886321 123456788999999999999999999999999999999
Q ss_pred cccChHHHhHHhHhHHHHHHHHHHccceeeeCCCceeecCCCCC
Q psy7003 1476 QSINPAIDIGQIQGAFIMGIGLWTFEHQIHDKRTGALLTNRTWV 1519 (1520)
Q Consensus 1476 ~~INP~~~~GQIeGg~vqGiG~aL~Ee~~~d~~~G~llt~~~w~ 1519 (1520)
++|||.+++||||||++||||++|+||+.||+ +|+++|++.|+
T Consensus 1184 ~~iNP~~~~GQieGG~~qGiG~aL~Ee~~~d~-~G~l~t~~~~d 1226 (1332)
T 3unc_A 1184 SSLNPAIDIGQVEGAFVQGLGLFTLEELHYSP-EGSLHTRGPST 1226 (1332)
T ss_dssp SCSCHHHHHHHHHHHHHHHHHHHHTCCCCBCT-TSCBCCCSTTT
T ss_pred ccCCHHHHHHHHHhhHHHHHHHHHhCcceECC-CCCCCCCCHHH
Confidence 99999999999999999999999999999995 89999999986
No 3
>1vlb_A Aldehyde oxidoreductase; iron-sulphur cluster; HET: PCD; 1.28A {Desulfovibrio gigas} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1 PDB: 1sij_A* 1zcs_A* 3fah_A* 3fc4_A* 3l4p_A*
Probab=100.00 E-value=1.4e-160 Score=1547.70 Aligned_cols=625 Identities=21% Similarity=0.237 Sum_probs=553.5
Q ss_pred CCCCCCCCccchhhhcccccccccCCC--CCCCcEEEEEEecCCCCeEeecCCchhhhcCCCEEEEEeccCCCCCCCCCC
Q psy7003 740 WPLTKPLPKIDAITQCAGEAEYVNDLP--QLSEEYFASVVLADRGPAKIQSIDSTLALAYPGVHTFVHAKDIPGKNLAIP 817 (1520)
Q Consensus 740 ~~iGk~~~r~da~~kvtG~a~Y~~Di~--~~pgmL~a~~vrSp~ahA~I~sID~s~A~a~PGV~avvt~~Dipg~n~~~~ 817 (1520)
+.|||+++|+|+..||||+++|++|+| .+|||||+++||||++||+|++||+++|+++|||++|+|++|+|+.+....
T Consensus 174 ~~iG~~~~R~d~~~kvtG~a~Y~~D~~~~~~~gmL~a~~vrSp~aharI~sID~s~A~~~pGV~~V~t~~D~p~~~~~~g 253 (907)
T 1vlb_A 174 RIWGSKYPRPTAVAKVTGTLDYGADLGLKMPAGTLHLAMVQAKVSHANIKGIDTSEALTMPGVHSVITHKDVKGKNRITG 253 (907)
T ss_dssp CCTTSCCCCTTHHHHHTTCSCCHHHHHHTSCTTCEEEEEEECSSSSEEEEEEECHHHHTSTTEEEEECGGGCCSCSEECC
T ss_pred ccCCCcCccccchhhcCCceeeecccCcCCCCCCeEEEEEecCCCCeEEEEechhHHhcCCCeEEEEEcccCcccccccC
Confidence 358999999999999999999999996 799999999999999999999999999999999999999999996432100
Q ss_pred CCCCCcccccccCCCCcccccccccCCCCCCCCCCCCCCCCcccccccccCeeeecCCEEEEEEECCHHHHHHHcccceE
Q psy7003 818 AAWPGQIFEDEKAYPGVHTFVHAKDIPGKNLAIPAAWPGQIFEDEKLFAENEVEFAGQIIGAIIADNFKSAYEAAKMVKV 897 (1520)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~~~~a~~~V~y~GqpVaaVvAet~~~A~~Aa~lV~V 897 (1520)
..| . + .+.....|+++|++++|+|+|||||+|||+|+|+|++|+++|+|
T Consensus 254 ~~~----~-------------------------~--~~~~~~~~~~~la~~~Vr~~Gq~VA~VvA~t~~~A~~Aa~~v~V 302 (907)
T 1vlb_A 254 LIT----F-------------------------P--TNKGDGWDRPILCDEKVFQYGDCIALVCADSEANARAAAEKVKV 302 (907)
T ss_dssp SSC----C-------------------------T--TCSSCSCCEESSCSSEECSTTCEEEEEEESSHHHHHHHHTTCEE
T ss_pred ccc----c-------------------------c--cccccCCCchhccCCeEEEcCCeEEEEEECCHHHHHHHhcceEE
Confidence 000 0 0 00011357899999999999999999999999999999999999
Q ss_pred EEeeCCCCCCCHHHHhhcCCccchhhh-------hccCCCccccCCCCCchhhHHHH-hhcccceEEEEEEEECccccCC
Q psy7003 898 VYSDVKTPKLDIKQIVQDGDKARIVEM-------FKLEPTATKSKFSPDSNARWEIL-EAGKKLFKIKGAAEFGPQYHYT 969 (1520)
Q Consensus 898 eYe~l~~~v~di~~Al~~~~~~~i~~~-------~~~~~g~~~~~~~~~~~~~~~~~-~~a~~~~vveg~~~~~~q~H~~ 969 (1520)
+||++| +++|+++|++++++ .+|+. ...+.||+ +++| ++++ ++||++|++++|+|+|
T Consensus 303 eye~lp-~v~~~~~Al~~~a~-~i~~~~~n~~~~~~~~~Gd~-----------~~af~a~A~--~vve~~y~~~~~~h~~ 367 (907)
T 1vlb_A 303 DLEELP-AYMSGPAAAAEDAI-EIHPGTPNVYFEQPIVKGED-----------TGPIFASAD--VTVEGDFYVGRQPHMP 367 (907)
T ss_dssp EEEECC-CCCSHHHHHSTTCC-CSSTTSCSEEEEEEEEESSC-----------HHHHHHHCS--EEEEEEEEECCCCCCC
T ss_pred EEEcCC-CCCCHHHHHhhcCc-cccccccccccccccccCCh-----------hhhhcccCC--eEEEEEEEECCccccC
Confidence 999998 69999999998863 34432 11123333 4579 9999 9999999999999999
Q ss_pred CCCCeeEEEEeC-CeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCCCCCCCchHHHHHHHHHHhcCCcEE
Q psy7003 970 MEGQTALCVPSE-DGVDIYAASQWVTLVQESVAGVLGLPNNRVNVKTRRIGGGYGAKLSRSCYPAVIAAVCSNVINKPVR 1048 (1520)
Q Consensus 970 mEp~~a~A~~~e-d~l~V~~sTQ~p~~vq~~vA~~LGlp~~kVrV~~~~vGGgFG~K~~~~~~~~~~AAlaA~~~gRPVr 1048 (1520)
|||++|+|+|++ |+|+||+|||+|+.+|..+|++||||.+||||+++++|||||+|.... ..+.||++|+++|||||
T Consensus 368 mEp~~~~A~~~~~g~l~v~~stQ~p~~~r~~lA~~Lglp~~~VrV~~~~vGGgFG~K~~~~--~~~~aA~~A~~~grPVk 445 (907)
T 1vlb_A 368 IEPDVAFAYMGDDGKCYIHSKSIGVHLHLYMIAPGVGLEPDQLVLVANPMGGTFGYKFSPT--SEALVAVAAMATGRPVH 445 (907)
T ss_dssp SSCCEEEEEECTTSCEEEEESCSCHHHHHHHHHHHHTCCGGGEEEEECCCSCCTTGGGSCS--SHHHHHHHHHHHSSCEE
T ss_pred CCCCeEEEEEcCCCcEEEEECCcChHHHHHHHHHHhCCChhhEEEEeCcCCCCCCCCcccc--HHHHHHHHHHHhCCCEE
Confidence 999999999996 679999999999999999999999999999999999999999999865 36789999999999999
Q ss_pred EEcChHHHHhccCCCCcEEEEEeeeccCCCccccccCCCccchhhhhhhhccceeeeccccccccccCcchhhhhccccc
Q psy7003 1049 IVMSIESMMGALGGRYPVYATYEIGTIGGNLSIKHEHPEFSSDVFLLLEVVGATITIRDTFGLEQTVSPEEYLSIDMNKK 1128 (1520)
Q Consensus 1049 l~~sRee~m~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1128 (1520)
|+|||+|+|..+++||++.++|
T Consensus 446 l~~tR~e~~~~~~~R~~~~~~~---------------------------------------------------------- 467 (907)
T 1vlb_A 446 LRYNYQQQQQYTGKRSPWEMNV---------------------------------------------------------- 467 (907)
T ss_dssp EECCHHHHHHSSCBCCCEEEEE----------------------------------------------------------
T ss_pred EEechHHHhhccCCCCceEEEE----------------------------------------------------------
Confidence 9999999999999999999888
Q ss_pred eeeeeecccccccccccccceeeeCCCCcEEEEEEEEEEecCCCcccchhhhHhhcccCCCCCCCCceEEEEEEEecCCC
Q psy7003 1129 VITYITFCPLIKNSYYLRTYKCGVDKNGVIQNLSTVFNVDKGMTLNENGFLHVRFGLGQASIYDPSTFRVVANAVRTDKP 1208 (1520)
Q Consensus 1129 ~~~~~~~~~~~~~~~~~~~~k~g~d~dG~i~al~~~~~~d~Ga~~~~~~~~~~~~~~~~~~~Y~ipn~r~~~~~v~TN~p 1208 (1520)
|+|+|+||+|++++++++.|+|+|.+.+..+..+...+..++|++||++++++.|+||++
T Consensus 468 --------------------~~g~d~dG~i~a~~~~~~~d~Gay~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~ 527 (907)
T 1vlb_A 468 --------------------KFAAKKDGTLLAMESDWLVDHGPYSEFGDLLTLRGAQFIGAGYNIPNIRGLGRTVATNHV 527 (907)
T ss_dssp --------------------EEEECTTCCEEEEEEEEEEECTTCCTTHHHHHHHHHHHTTTTBCCCEEEEEEEEECCSSC
T ss_pred --------------------EEEECCCCCEEEEEEEEEEcCCcccccchHHHHHHHhccCCCcCCCcEEEEEEEEcCCCC
Confidence 999999999999999999999999877665555544568899999999999999999999
Q ss_pred CCcccCCCCchhHHHHHHHHHHHHHHHhCCCHHHHHHHhcCCc-------------hHHHHHHHHHhccChHHHHHHHHH
Q psy7003 1209 TYGFTRSPGACEVTAFIEHVMDHIATVVNRDPTDVRIANLRNE-------------DVKKFYQQFRGSVKYKERRDAIET 1275 (1520)
Q Consensus 1209 ~~ga~Rg~G~~q~~fa~E~~mD~iA~~lg~DP~e~R~~Nl~~~-------------~~~~~~~~~~~~~~~~~r~~~~~~ 1275 (1520)
|+|||||||.+|++|++|++||++|++|||||+|||++|+++. ++.++|+++++. |++|+++.+.
T Consensus 528 ~~ga~Rg~G~~q~~fa~E~~mDelA~~lG~DP~e~R~~N~~~~~~~~~~g~~~~~~~~~~~l~~~~~~--w~~r~~~~~~ 605 (907)
T 1vlb_A 528 WGSAFRGYGAPQSMFASECLMDMLAEKLGMDPLELRYKNAYRPGDTNPTGQEPEVFSLPDMIDQLRPK--YQAALEKAQK 605 (907)
T ss_dssp CBCCCTTTTHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHBCCTTCCCTTSCCCSCCCHHHHHHHHHHH--HHHHHHHHHH
T ss_pred CCcccCCCChHHHHHHHHHHHHHHHHHhCcCHHHHHHHhcCCCCCcCCCCccccCccHHHHHHHHHHH--HHHhhhhhhh
Confidence 9999999999999999999999999999999999999999732 389999999998 9988777665
Q ss_pred HhhhhhhhhhhhhhhhhccCCccccccceEEEEeccCCC--CcceEEEEEEcCCCeEEEEecCcccCcchHHHHHHHHHH
Q psy7003 1276 FNAVRVLISQYSLRHCFQNNRWRKRGISAVVTLFPLGFY--DVSYAILSVFRRDATVAITTSGIEIGQGLHTKVAQACAY 1353 (1520)
Q Consensus 1276 ~n~~~~~~~~~~~~~~~~~~~~~krGig~~~~~~~~g~~--~~~~a~v~v~~~DGsV~i~~g~~e~GQG~~T~~aQiaA~ 1353 (1520)
|+ +|+| |||+|+++..++.+++ +++.|.|+| ++||+|.|.+|+.|||||++|+++||+|+
T Consensus 606 ~~----------------~g~~-~rGiGiA~~~~~~g~~~~~~~~a~v~l-~~DG~v~v~~g~~e~GqG~~T~~aQiaAe 667 (907)
T 1vlb_A 606 ES----------------TATH-KKGVGISIGVYGSGLDGPDASEAWAEL-NADGTITVHTAWEDHGQGADIGCVGTAHE 667 (907)
T ss_dssp HC----------------CSSE-EEEEEEEEEEEESSSTTTCEEEEEEEE-CTTSCEEEECCCCCSSSCHHHHHHHHHHH
T ss_pred cc----------------CCCc-eeEEEEEEEEeccccCCCCCccEEEEE-eCCCeEEEEECCccCCCCHHHHHHHHHHH
Confidence 52 6788 7999999999998864 578899996 67999999999999999999999999999
Q ss_pred Hh---CCCCCcEEEecCCCCCCCCCCCCcccccccchHHHHHHHHHHHHHHhhhhhhcCCCHHHHHHHHhhcCceeEEEE
Q psy7003 1354 EL---GIPIEKIVLKPAQNNIFPNAANTGGSTASDNAARCILLCCQELKTRLMPYMDKGKSWEKTISDAFERGVDLQVTK 1430 (1520)
Q Consensus 1354 ~L---gip~e~I~v~~~dT~~~p~~~~t~gS~~t~~~g~Av~~Ac~~l~~rl~~~~~~~~~w~~~~~~a~~~gv~l~~~~ 1430 (1520)
+| |||+|+|+|..+||+.+|++++|+|||+|+++|.||++||++||+||++++++..+|++++..++ .+...+
T Consensus 668 ~L~~~Gip~~~V~v~~~DT~~~p~~~~t~gSr~t~~~G~Av~~Aa~~l~~~l~~~aa~~l~~~el~~~~~----~~~~~~ 743 (907)
T 1vlb_A 668 ALRPMGVAPEKIKFTWPNTATTPNSGPSGGSRQQVMTGNAIRVACENLLKACEKPGGGYYTYDELKAADK----PTKITG 743 (907)
T ss_dssp HHGGGTCCGGGEEECCCBTTTSCCCCCSCTTCHHHHHHHHHHHHHHHHHHHHBCTTSSBCCHHHHHHTTC----CCEEEE
T ss_pred HHhhcCCCHHHEEEecCCCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHhhccCCHHHHHhhcc----cccccc
Confidence 99 99999999999999999999999999999999999999999999999999998889999987653 333344
Q ss_pred EeeccC--------CCCCCCccccceEEEEEEEEECCCCcEEEEEEEEEEecCcccChHHHhHHhHhHHHHHHHHHHccc
Q psy7003 1431 SVSSQQ--------TPDLLPMYTIPTAAATEVEVDLLTGQHQILRVDILEDTGQSINPAIDIGQIQGAFIMGIGLWTFEH 1502 (1520)
Q Consensus 1431 ~~~~~~--------~~~~~~~~~~~ga~~aEVEVD~~TG~v~V~r~~~~~D~G~~INP~~~~GQIeGg~vqGiG~aL~Ee 1502 (1520)
.|.... ..+.++.+|+|||+++|||||++||+++|+|+++++|||++|||.+++||||||++||||++|+|+
T Consensus 744 ~~~~~~~~~~~~~~~~~~p~~~~~~ga~~aEVeVD~~TG~v~V~r~~~v~D~G~viNP~~~~gQieGG~~qGlG~aL~Ee 823 (907)
T 1vlb_A 744 NWTASGATHCDAVTGLGKPFVVYMYGVFMAEVTVDVATGQTTVDGMTLMADLGSLCNQLATDGQIYGGLAQGIGLALSED 823 (907)
T ss_dssp EEECTTCBCCCTTTCCSBCCSCEEEEEEEEEEEEETTTCCEEEEEEEEEEECSSCSCHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred eecCCCccccccccCCCCCCCCcceEEEEEEEEEECCCCcEEEEEEEEEEECCccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 443110 111223566999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeCCCceeecCCCCC
Q psy7003 1503 QIHDKRTGALLTNRTWV 1519 (1520)
Q Consensus 1503 ~~~d~~~G~llt~~~w~ 1519 (1520)
+. |+++|+|.|+
T Consensus 824 ~~-----G~~~~~~~~d 835 (907)
T 1vlb_A 824 FE-----DIKKHATLVG 835 (907)
T ss_dssp CC-----STTTSSSTTT
T ss_pred hc-----CeeCCCChhh
Confidence 97 9999998875
No 4
>1dgj_A Aldehyde oxidoreductase; beta half-barrel, four-helix bundle, beta barrel; HET: MCN; 2.80A {Desulfovibrio desulfuricans} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1
Probab=100.00 E-value=1e-159 Score=1539.87 Aligned_cols=625 Identities=21% Similarity=0.223 Sum_probs=549.8
Q ss_pred CCCCCCCCccchhhhcccccccccC--CCCCCCcEEEEEEecCCCCeEeecCCchhhhcCCCEEEEEeccCCCCCCCCCC
Q psy7003 740 WPLTKPLPKIDAITQCAGEAEYVND--LPQLSEEYFASVVLADRGPAKIQSIDSTLALAYPGVHTFVHAKDIPGKNLAIP 817 (1520)
Q Consensus 740 ~~iGk~~~r~da~~kvtG~a~Y~~D--i~~~pgmL~a~~vrSp~ahA~I~sID~s~A~a~PGV~avvt~~Dipg~n~~~~ 817 (1520)
+.|||+++|+|+..||||+++|++| +|.+|||||+++||||++||+|+|||+++|+++|||++|+|++|+|+.+....
T Consensus 174 ~~iG~~~~R~d~~~kvtG~a~Y~~D~~~~~~~gmL~a~~vrSp~aharI~sID~s~A~~~PGV~~V~t~~D~p~~~~~~g 253 (907)
T 1dgj_A 174 RIWGSSIPRPSAVAKVTGLAEFGADAALRMPENTLHLALAQAKVSHALIKGIDTSEAEKMPGVYKVLTHKDVKGKNRITG 253 (907)
T ss_dssp CCTTSCCCCTTHHHHHHTCCCBHHHHGGGSCTTCEEEEEEECSSSSEEEEEEECHHHHHSTTEEEEECGGGCCSCSEECC
T ss_pred cccCCCCCCcchhhhcCCceEeecCcCccCCCCCeEEEEEecCCCCEEEEeCChHHHhcCCCcEEEEEcccCCccccccC
Confidence 3589999999999999999999999 86799999999999999999999999999999999999999999996432100
Q ss_pred CCCCCcccccccCCCCcccccccccCCCCCCCCCCCCCCCCcccccccccCeeeecCCEEEEEEECCHHHHHHHcccceE
Q psy7003 818 AAWPGQIFEDEKAYPGVHTFVHAKDIPGKNLAIPAAWPGQIFEDEKLFAENEVEFAGQIIGAIIADNFKSAYEAAKMVKV 897 (1520)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~~~~a~~~V~y~GqpVaaVvAet~~~A~~Aa~lV~V 897 (1520)
..| . + .+.....|+|+|++++|+|+|||||+|||+|+|+|++|+++|+|
T Consensus 254 ~~~----~-------------------------~--~~~~~~~~~~~la~~~Vry~Gq~VA~VvAet~~~A~~Aa~~v~V 302 (907)
T 1dgj_A 254 LIT----F-------------------------P--TNKGDGWERPILNDSKIFQYGDALAIVCADSEANARAAAEKVKF 302 (907)
T ss_dssp SSC----C-------------------------T--TCSSCSCCEESSCSSEECSTTCEEEEEEESSHHHHHHHHTTCEE
T ss_pred ccc----c-------------------------c--cccccCCCcccccCCeEEEcCCeEEEEEECCHHHHHHHhcccEE
Confidence 000 0 0 00011357899999999999999999999999999999999999
Q ss_pred EEeeCCCCCCCHHHHhhcCCccchhhhh-------ccCCCccccCCCCCchhhHHHH--hhcccceEEEEEEEECccccC
Q psy7003 898 VYSDVKTPKLDIKQIVQDGDKARIVEMF-------KLEPTATKSKFSPDSNARWEIL--EAGKKLFKIKGAAEFGPQYHY 968 (1520)
Q Consensus 898 eYe~l~~~v~di~~Al~~~~~~~i~~~~-------~~~~g~~~~~~~~~~~~~~~~~--~~a~~~~vveg~~~~~~q~H~ 968 (1520)
+||++| +++|+++|++++++ .+|+.. ..+.||+ +++| ++++ ++||++|++++|+|+
T Consensus 303 eye~lp-~v~~~~~Al~~~a~-~i~~~~~n~~~~~~~~~Gd~-----------~~af~~a~A~--~vve~~y~~~~~~h~ 367 (907)
T 1dgj_A 303 DLELLP-EYMSAPEAMAPDAI-EIHPGTPNVYYDQLEEKGED-----------TVPFFNDPAN--VVAEGSYYTQRQPHL 367 (907)
T ss_dssp EEEECC-CCCSHHHHHSTTCC-CSBTTBCSEEEEEEEEESSC-----------SHHHHSCTTS--EEEEEEEEECCCCCC
T ss_pred EEEcCC-CCCCHHHHHhhcCc-ccccccccccceeccccCCh-----------hhhhcccCCC--EEEEEEEEECCcccc
Confidence 999998 69999999998863 344321 1123443 3568 8999 999999999999999
Q ss_pred CCCCCeeEEEEeC-CeEEEEeCCCChHHHHHHHHHHhCCC-CCcEEEEecccCCCCCCCCCCCchHHHHHHHHHHhcCCc
Q psy7003 969 TMEGQTALCVPSE-DGVDIYAASQWVTLVQESVAGVLGLP-NNRVNVKTRRIGGGYGAKLSRSCYPAVIAAVCSNVINKP 1046 (1520)
Q Consensus 969 ~mEp~~a~A~~~e-d~l~V~~sTQ~p~~vq~~vA~~LGlp-~~kVrV~~~~vGGgFG~K~~~~~~~~~~AAlaA~~~gRP 1046 (1520)
||||++|+|+|++ |+|+||+|||+|+.+|..+|++|||| .+||||+++++|||||+|.... ..+.||++|+++|||
T Consensus 368 ~mEp~~~~A~~~~~g~l~v~~stQ~p~~~r~~lA~~Lglp~~~~VrV~~~~vGGgFG~K~~~~--~~~~aA~~A~~~grP 445 (907)
T 1dgj_A 368 PIEPDVGYGYINEQGQVVIHSKSVAIHLHALMIAPGLGLEFPKDLVLVQNTTGGTFGYKFSPT--MEALVGVAVMATGRP 445 (907)
T ss_dssp CSSCCEEEEEECTTSCEEEEECCSCHHHHHHHHHHHHTCCTTTTEEEEECBCSCCTTGGGSCS--SHHHHHHHHHHHCSC
T ss_pred CCCCCeEEEEEcCCCcEEEEECCcCHHHHHHHHHHHhCCCCCccEEEEeCCCCCCCCCCcccc--HHHHHHHHHHHhCCC
Confidence 9999999999996 67999999999999999999999999 9999999999999999999865 367899999999999
Q ss_pred EEEEcChHHHHhccCCCCcEEEEEeeeccCCCccccccCCCccchhhhhhhhccceeeeccccccccccCcchhhhhccc
Q psy7003 1047 VRIVMSIESMMGALGGRYPVYATYEIGTIGGNLSIKHEHPEFSSDVFLLLEVVGATITIRDTFGLEQTVSPEEYLSIDMN 1126 (1520)
Q Consensus 1047 Vrl~~sRee~m~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1126 (1520)
|||+|||+|+|..+++||++.++|
T Consensus 446 Vkl~~tR~e~~~~~~~R~~~~~~~-------------------------------------------------------- 469 (907)
T 1dgj_A 446 CHLRYNYEQQQNYTGKRSPFWTTM-------------------------------------------------------- 469 (907)
T ss_dssp EEEECCHHHHHHSSCBCCCEEEEE--------------------------------------------------------
T ss_pred EEEEeehHHHhhhcCCCCceEEEE--------------------------------------------------------
Confidence 999999999999999999999888
Q ss_pred cceeeeeecccccccccccccceeeeCCCCcEEEEEEEEEEecCCCcccchhhhHhhcccCCCCCCCCceEEEEEEEecC
Q psy7003 1127 KKVITYITFCPLIKNSYYLRTYKCGVDKNGVIQNLSTVFNVDKGMTLNENGFLHVRFGLGQASIYDPSTFRVVANAVRTD 1206 (1520)
Q Consensus 1127 ~~~~~~~~~~~~~~~~~~~~~~k~g~d~dG~i~al~~~~~~d~Ga~~~~~~~~~~~~~~~~~~~Y~ipn~r~~~~~v~TN 1206 (1520)
|+|+|+||+|++++++++.|+|+|.+.+..+..+...+..++|++||++++++.|+||
T Consensus 470 ----------------------~~g~d~dG~i~a~~~~~~~d~Gay~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~Tn 527 (907)
T 1dgj_A 470 ----------------------RYAADRQGKILAMETDWSVDHGPYSEFGDLLTLRGAQYIGAGYGIANIRGTGRTVATN 527 (907)
T ss_dssp ----------------------EEEECTTSCEEEEEEEEEEECCSCCTTHHHHHHHHHHHTTTTBCCSEEEEEEEEECCS
T ss_pred ----------------------EEEECCCCCEEEEEEEEEEcCCcccccchHHHHHHHHhcCCCcCCCcEEEEEEEEcCC
Confidence 9999999999999999999999998776655555445688999999999999999999
Q ss_pred CCCCcccCCCCchhHHHHHHHHHHHHHHHhCCCHHHHHHHhcCCc-------------hHHHHHHHHHhccChHHHHHHH
Q psy7003 1207 KPTYGFTRSPGACEVTAFIEHVMDHIATVVNRDPTDVRIANLRNE-------------DVKKFYQQFRGSVKYKERRDAI 1273 (1520)
Q Consensus 1207 ~p~~ga~Rg~G~~q~~fa~E~~mD~iA~~lg~DP~e~R~~Nl~~~-------------~~~~~~~~~~~~~~~~~r~~~~ 1273 (1520)
++|+|||||||.+|++|++|++||++|++|||||+|||++|+++. ++.++|+++++. |++|+++.
T Consensus 528 ~~~~ga~Rg~G~~q~~fa~E~~mDelA~~lG~DP~e~R~~N~~~~~~~~~~g~~~~s~~~~~~l~~~~~~--w~~r~~~~ 605 (907)
T 1dgj_A 528 HCWGAAFRGYGAPESEFPSEVLMDELAEKLGMDPFELRALNCYREGDTTSSGQIPEVMSLPEMFDKMRPY--YEESKKRV 605 (907)
T ss_dssp SCCBCCCTTTTHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHBCCTTCCCTTSCCCSCCCHHHHHHHHHHH--HHHHHHHH
T ss_pred CCCCcccCCCCHHHHHHHHHHHHHHHHHHhCcCHHHHHHHhcCCCCCcCCCCccccCccHHHHHHHHHHH--HHhhhhhh
Confidence 999999999999999999999999999999999999999999732 389999999998 99887766
Q ss_pred HHHhhhhhhhhhhhhhhhhccCCccccccceEEEEeccCCC--CcceEEEEEEcCCCeEEEEecCcccCcchHHHHHHHH
Q psy7003 1274 ETFNAVRVLISQYSLRHCFQNNRWRKRGISAVVTLFPLGFY--DVSYAILSVFRRDATVAITTSGIEIGQGLHTKVAQAC 1351 (1520)
Q Consensus 1274 ~~~n~~~~~~~~~~~~~~~~~~~~~krGig~~~~~~~~g~~--~~~~a~v~v~~~DGsV~i~~g~~e~GQG~~T~~aQia 1351 (1520)
+.|+ +|+| |||+|+++..++.+++ +++.|.|+| ++||+|.|.+|++|||||++|+++||+
T Consensus 606 ~~~~----------------~g~~-~rG~Gia~~~~~~g~~~~~~~~a~v~l-~~DG~v~v~~g~~e~GqG~~T~~aQia 667 (907)
T 1dgj_A 606 KERS----------------TAEI-KRGVGVALGVYGAGLDGPDTSEAWVEL-NDDGSVTLGNSWEDHGQGADAGSLGTA 667 (907)
T ss_dssp HTTC----------------CSSE-EEEEEEEEEEEEESSSSSCEEEEEEEE-CTTSCEEEEECCCCSSSCHHHHHHHHH
T ss_pred hccc----------------CCCe-eEEEEEEEEEecccCCCCCCccEEEEE-eCCCeEEEEECCcCCCccHHHHHHHHH
Confidence 5442 6788 7999999999988764 578899996 679999999999999999999999999
Q ss_pred HHHh---CCCCCcEEEecCCCCCCCCCCCCcccccccchHHHHHHHHHHHHHHhhhhhhcCCCHHHHHHHHhhcCceeEE
Q psy7003 1352 AYEL---GIPIEKIVLKPAQNNIFPNAANTGGSTASDNAARCILLCCQELKTRLMPYMDKGKSWEKTISDAFERGVDLQV 1428 (1520)
Q Consensus 1352 A~~L---gip~e~I~v~~~dT~~~p~~~~t~gS~~t~~~g~Av~~Ac~~l~~rl~~~~~~~~~w~~~~~~a~~~gv~l~~ 1428 (1520)
|++| |||+|+|+|..+||+.+|++++|+|||+|.++|.||++||++||+||++++++..+|+++. . .|.-+..
T Consensus 668 Ae~L~~~Gip~~~V~v~~~DT~~~p~~~~t~gSr~t~~~G~Av~~Aa~~l~~~l~~~aa~~l~~~~l~-~---~g~~~~~ 743 (907)
T 1dgj_A 668 HEALRPLGITPENIHLVMNDTSKTPNSGPAGGSRSQVVTGNAIRVACEMLIEGMRKPGGGFFTPAEMK-A---EGRPMRY 743 (907)
T ss_dssp HHHTGGGTCCGGGEEEEESBTTTSCCCCCSCTTCTTTHHHHHHHHHHHHHHHHTBCSSSSBCCHHHHH-H---TTCCCEE
T ss_pred HHHHhhcCCCHHHEEEecCCCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHhhhcCCHHHHh-h---CCeEEEe
Confidence 9999 9999999999999999999999999999999999999999999999999998877999987 3 2322333
Q ss_pred EEEeecc--C-C---CCCCCccccceEEEEEEEEECCCCcEEEEEEEEEEecCcccChHHHhHHhHhHHHHHHHHHHccc
Q psy7003 1429 TKSVSSQ--Q-T---PDLLPMYTIPTAAATEVEVDLLTGQHQILRVDILEDTGQSINPAIDIGQIQGAFIMGIGLWTFEH 1502 (1520)
Q Consensus 1429 ~~~~~~~--~-~---~~~~~~~~~~ga~~aEVEVD~~TG~v~V~r~~~~~D~G~~INP~~~~GQIeGg~vqGiG~aL~Ee 1502 (1520)
.+.|... . . .+.++.+++|||+++|||||++||+++|+|+++++|||++|||.+++||||||++||||++|+|+
T Consensus 744 ~~~~~~~~~~~~~~~~~~~~~~~~~ga~~aEVeVD~~TG~v~V~r~~~v~D~G~~iNP~~~~gQieGG~~qGiG~aL~Ee 823 (907)
T 1dgj_A 744 DGKWTAPAKDCDAKGQGSPFACYMYGLFLTEVAVEVATGKATVEKMVCVADIGKICNKLVVDGQIYGGLAQGVGLALSED 823 (907)
T ss_dssp EEEEECSCBCCCTTSCSBCCSEEEEEEEEEEEEEETTTTEEEEEEEEEEEECBSCSCHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred cceeeccCCCcCCCCCCCCCCCCceEEEEEEEEEECCCCcEEEEEEEEEEECCccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444311 0 0 01223356999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeCCCceeecCCCCC
Q psy7003 1503 QIHDKRTGALLTNRTWV 1519 (1520)
Q Consensus 1503 ~~~d~~~G~llt~~~w~ 1519 (1520)
+. |+++|+|.|+
T Consensus 824 ~~-----G~~~~~~~~d 835 (907)
T 1dgj_A 824 YE-----DLKKHSTMGG 835 (907)
T ss_dssp CC-----STTTTSSTTT
T ss_pred hc-----CeeCCCChhh
Confidence 97 9999998875
No 5
>3nvz_C Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3ns1_C* 3etr_C* 3nvv_C* 3nvw_C* 3nrz_C* 3nvy_C* 3eub_C* 3b9j_C* 1fiq_C* 3rca_C* 3sr6_C*
Probab=100.00 E-value=1e-134 Score=1286.31 Aligned_cols=628 Identities=32% Similarity=0.507 Sum_probs=576.8
Q ss_pred CCCCCCCCccchhhhcccccccccCCCCCCCcEEEEEEecCCCCeEeecCCchhhhcCCCEEEEEeccCCCCCCCCCCCC
Q psy7003 740 WPLTKPLPKIDAITQCAGEAEYVNDLPQLSEEYFASVVLADRGPAKIQSIDSTLALAYPGVHTFVHAKDIPGKNLAIPAA 819 (1520)
Q Consensus 740 ~~iGk~~~r~da~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~ahA~I~sID~s~A~a~PGV~avvt~~Dipg~n~~~~~~ 819 (1520)
|+|||+++|+|+..||||+++|++|++.+|||||+++||||++||+|+|||+++|+++|||++|+|++|+|+.|.+
T Consensus 1 ~~iG~~~~R~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~aha~I~siD~s~A~~~pGV~~V~t~~d~p~~~~~---- 76 (755)
T 3nvz_C 1 DTVGRPLPHLAAAMQASGEAVYCDDIPRYENELFLRLVTSTRAHAKIKSIDVSEAQKVPGFVCFLSADDIPGSNET---- 76 (755)
T ss_dssp CCTTSCCCCTTHHHHHHTCSCCGGGSCCBTTCEEEEEEECSSSSEEEEEEECTTGGGSTTEEEEECGGGCSSCSEE----
T ss_pred CCCCCCCcCcchHHhcccccccccccCCCCCcEEEEEEECCCCCeEEEEeehHHHhcCCCeEEEEEcCCCCccccC----
Confidence 7999999999999999999999999943699999999999999999999999999999999999999999976632
Q ss_pred CCCcccccccCCCCcccccccccCCCCCCCCCCCCCCCCcccccccccCeeeecCCEEEEEEECCHHHHHHHcccceEEE
Q psy7003 820 WPGQIFEDEKAYPGVHTFVHAKDIPGKNLAIPAAWPGQIFEDEKLFAENEVEFAGQIIGAIIADNFKSAYEAAKMVKVVY 899 (1520)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~~~~a~~~V~y~GqpVaaVvAet~~~A~~Aa~lV~VeY 899 (1520)
| ...|+|+|++++|+|+|||||+|||+|+|+|++|+++|+|+|
T Consensus 77 ------------------------------------g-~~~~~~~la~~~Vry~Gq~Va~VvA~t~~~A~~Aa~~v~Vey 119 (755)
T 3nvz_C 77 ------------------------------------G-LFNDETVFAKDTVTCVGHIIGAVVADTPEHAERAAHVVKVTY 119 (755)
T ss_dssp ------------------------------------S-TTSCEESSCCSEECSTTCEEEEEEESSHHHHHHHHHTCEEEE
T ss_pred ------------------------------------C-CCCCcccccCCeEEEcCCeEEEEEECCHHHHHHHhcccceEE
Confidence 1 135789999999999999999999999999999999999999
Q ss_pred eeCCCCCCCHHHHhhcCCccchhhhhccCCCccccCCCCCchhhHHHHhhcccceEEEEEEEECccccCCCCCCeeEEEE
Q psy7003 900 SDVKTPKLDIKQIVQDGDKARIVEMFKLEPTATKSKFSPDSNARWEILEAGKKLFKIKGAAEFGPQYHYTMEGQTALCVP 979 (1520)
Q Consensus 900 e~l~~~v~di~~Al~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~vveg~~~~~~q~H~~mEp~~a~A~~ 979 (1520)
|++| +++|+++|++++++. +.....+.||+ +++|++++ ++||++|++++|+|+||||++|+|+|
T Consensus 120 e~lp-~v~~~~~a~~~~~~~--~~~~~~~~Gd~-----------~~a~a~A~--~vve~~y~~~~~~h~~mEp~~~~A~~ 183 (755)
T 3nvz_C 120 EDLP-AIITIEDAIKNNSFY--GSELKIEKGDL-----------KKGFSEAD--NVVSGELYIGGQDHFYLETHCTIAIP 183 (755)
T ss_dssp EECC-CCCSHHHHHHTTCEE--EEEEEEEESCH-----------HHHHHHCS--EEEEEEEEECCBCCCCSSCCEEEEEE
T ss_pred EcCC-CCCCHHHHhhccCcc--CCCcccccCCH-----------hHHhhcCC--eEEEEEEEeCCccccCCCCceEEEEE
Confidence 9998 699999999887531 11112234543 35799999 99999999999999999999999999
Q ss_pred e--CCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCCCCCCCchHHHHHHHHHHhcCCcEEEEcChHHHH
Q psy7003 980 S--EDGVDIYAASQWVTLVQESVAGVLGLPNNRVNVKTRRIGGGYGAKLSRSCYPAVIAAVCSNVINKPVRIVMSIESMM 1057 (1520)
Q Consensus 980 ~--ed~l~V~~sTQ~p~~vq~~vA~~LGlp~~kVrV~~~~vGGgFG~K~~~~~~~~~~AAlaA~~~gRPVrl~~sRee~m 1057 (1520)
+ +|+|+||+|||+|+.+|..+|++||||.+||||+++++|||||+|...+...++.||++|+++||||||+|||+|+|
T Consensus 184 ~~~~g~l~v~~stQ~p~~~r~~lA~~Lglp~~~VrV~~~~vGGgFG~K~~~~~~~~~~aa~aA~~~grPVk~~~tR~e~~ 263 (755)
T 3nvz_C 184 KGEEGEMELFVSTQNAMKTQSFVAKMLGVPVNRILVRVKRMGGGFGGKETRSTLVSVAVALAAYKTGHPVRCMLDRNEDM 263 (755)
T ss_dssp CSSTTCEEEEECCSCHHHHHHHHHHHHTCCGGGEEEEECCCSCCTTTTSSTTHHHHHHHHHHHHHHSSCEEEECCHHHHH
T ss_pred eCCCCeEEEEECCCCHHHHHHHHHHHHCCCCccEEEEECCCCCCCCCcccccchHHHHHHHHHHHhCCCEEEEecHHHHH
Confidence 8 45799999999999999999999999999999999999999999998654557889999999999999999999999
Q ss_pred hccCCCCcEEEEEeeeccCCCccccccCCCccchhhhhhhhccceeeeccccccccccCcchhhhhccccceeeeeeccc
Q psy7003 1058 GALGGRYPVYATYEIGTIGGNLSIKHEHPEFSSDVFLLLEVVGATITIRDTFGLEQTVSPEEYLSIDMNKKVITYITFCP 1137 (1520)
Q Consensus 1058 ~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1137 (1520)
..+++||++.++|
T Consensus 264 ~~~~~R~~~~~~~------------------------------------------------------------------- 276 (755)
T 3nvz_C 264 LITGGRHPFLARY------------------------------------------------------------------- 276 (755)
T ss_dssp HHSCCBCCEEEEE-------------------------------------------------------------------
T ss_pred hhcCCCCceEEEE-------------------------------------------------------------------
Confidence 9999999999888
Q ss_pred ccccccccccceeeeCCCCcEEEEEEEEEEecCCCcccchhhhHhhcccCCCCCCCCceEEEEEEEecCCCCCcccCCCC
Q psy7003 1138 LIKNSYYLRTYKCGVDKNGVIQNLSTVFNVDKGMTLNENGFLHVRFGLGQASIYDPSTFRVVANAVRTDKPTYGFTRSPG 1217 (1520)
Q Consensus 1138 ~~~~~~~~~~~k~g~d~dG~i~al~~~~~~d~Ga~~~~~~~~~~~~~~~~~~~Y~ipn~r~~~~~v~TN~p~~ga~Rg~G 1217 (1520)
|+|+|+||+|++++++++.|+|+|.+.+..+..+...+..++|++||++++++.|+||+|+++||||||
T Consensus 277 -----------~~g~d~dG~i~a~~~~~~~d~Ga~~~~~~~~~~~~~~~~~~~Y~ipn~~~~~~~v~Tn~~~~~a~Rg~G 345 (755)
T 3nvz_C 277 -----------KVGFMKTGTIVALEVDHYSNAGNSRDLSHSIMERALFHMDNCYKIPNIRGTGRLCKTNLSSNTAFRGFG 345 (755)
T ss_dssp -----------EEEECTTCCEEEEEEEEEEEEESSCTTHHHHHHHHHHTTTTTBCCSSEEEEEEEEECSSCCCCCCTTTT
T ss_pred -----------EEEECCCCcEEEEEEEEEEccCcCcCccHHHHHHHHHhcCCCccCCcEEEEEEEEeCCCCCCCcccCCC
Confidence 999999999999999999999999887655555666678999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHhCCCHHHHHHHhcCC-------------chHHHHHHHHHhccChHHHHHHHHHHhhhhhhhh
Q psy7003 1218 ACEVTAFIEHVMDHIATVVNRDPTDVRIANLRN-------------EDVKKFYQQFRGSVKYKERRDAIETFNAVRVLIS 1284 (1520)
Q Consensus 1218 ~~q~~fa~E~~mD~iA~~lg~DP~e~R~~Nl~~-------------~~~~~~~~~~~~~~~~~~r~~~~~~~n~~~~~~~ 1284 (1520)
.+|++|++|++||++|++|||||+|||++|++. ..+.+||+++++.++|++|+++++.||+
T Consensus 346 ~~q~~fa~E~~mDelA~~lg~DP~e~R~~N~~~~~~~~~~g~~~~s~~~~~~l~~~~~~~~~~~r~~~~~~~~~------ 419 (755)
T 3nvz_C 346 GPQALFIAENWMSEVAVTCGLPAEEVRWKNMYKEGDLTHFNQRLEGFSVPRCWDECLKSSQYYARKSEVDKFNK------ 419 (755)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCHHHHHHHHBCCTTCBCTTCCBCTTCCHHHHHHHHHHHTTHHHHHHHHHHHHH------
T ss_pred hHHHHHHHHHHHHHHHHHHCcCHHHHHHHhCCCCCCcCCCCccccCCCHHHHHHHHHHhcCHHHHHHHHHhhhc------
Confidence 999999999999999999999999999999983 2589999999999999999999999997
Q ss_pred hhhhhhhhccCCccccccceEEEEeccCCC----CcceEEEEEEcCCCeEEEEecCcccCcchHHHHHHHHHHHhCCCCC
Q psy7003 1285 QYSLRHCFQNNRWRKRGISAVVTLFPLGFY----DVSYAILSVFRRDATVAITTSGIEIGQGLHTKVAQACAYELGIPIE 1360 (1520)
Q Consensus 1285 ~~~~~~~~~~~~~~krGig~~~~~~~~g~~----~~~~a~v~v~~~DGsV~i~~g~~e~GQG~~T~~aQiaA~~Lgip~e 1360 (1520)
+++|+|||+|++++.+++|+. ++++|.|+| ++||+|+|.+|+.|||||++|+++||+|++||||+|
T Consensus 420 ---------~~~~~~rGig~~~~~~g~g~~~~~~~~~~a~v~l-~~DG~v~v~~g~~e~GQG~~T~~aQiaAe~Lgi~~e 489 (755)
T 3nvz_C 420 ---------ENCWKKRGLCIIPTKFGISFTVPFLNQAGALIHV-YTDGSVLVSHGGTEMGQGLHTKMVQVASKALKIPIS 489 (755)
T ss_dssp ---------HCSSEEEEEEEEEEEEEESCSSGGGCEEEEEEEE-CTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTSCGG
T ss_pred ---------cCCccceeEEEEEEEecccccCCCCCcceEEEEE-ecCCeEEEEECCCCCCCCHHHHHHHHHHHHHCCCHH
Confidence 789999999999999988864 468899997 689999999999999999999999999999999999
Q ss_pred cEEEecCCCCCCCCCCCCcccccccchHHHHHHHHHHHHHHhhhhhhc--CCCHHHHHHHHhhcCceeEEEEEeeccC--
Q psy7003 1361 KIVLKPAQNNIFPNAANTGGSTASDNAARCILLCCQELKTRLMPYMDK--GKSWEKTISDAFERGVDLQVTKSVSSQQ-- 1436 (1520)
Q Consensus 1361 ~I~v~~~dT~~~p~~~~t~gS~~t~~~g~Av~~Ac~~l~~rl~~~~~~--~~~w~~~~~~a~~~gv~l~~~~~~~~~~-- 1436 (1520)
+|+|..+||+.+|++++|+|||+|.++|.||++||++||+||++++++ ..+|++++..++..++.|+++++|....
T Consensus 490 ~V~v~~~DT~~~p~~~~t~aSr~t~~~G~Av~~Aa~~l~~~l~~~aa~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 569 (755)
T 3nvz_C 490 KIYISETSTNTVPNSSPTAASVSTDIYGQAVYEACQTILKRLEPFKKKNPDGSWEDWVMAAYQDRVSLSTTGFYRTPNLG 569 (755)
T ss_dssp GEECCCEETTTSCSCCCSCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHTTCCCEEEEEEECSSCC
T ss_pred HEEEECCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCHHHHHHHhhccccceEEEEEEecCCcc
Confidence 999999999999999999999999999999999999999999998765 5789999999988888999998886321
Q ss_pred -----CCCCCCccccceEEEEEEEEECCCCcEEEEEEEEEEecCcccChHHHhHHhHhHHHHHHHHHHccceeeeCCCce
Q psy7003 1437 -----TPDLLPMYTIPTAAATEVEVDLLTGQHQILRVDILEDTGQSINPAIDIGQIQGAFIMGIGLWTFEHQIHDKRTGA 1511 (1520)
Q Consensus 1437 -----~~~~~~~~~~~ga~~aEVEVD~~TG~v~V~r~~~~~D~G~~INP~~~~GQIeGg~vqGiG~aL~Ee~~~d~~~G~ 1511 (1520)
..+.++.+++|||+++|||||++||+++|+|+++++|||++|||.+++||||||++||||++|+||+.||+ +|+
T Consensus 570 ~~~~~~~g~~~~~~~~ga~~aeVeVD~~TG~v~v~r~~~v~D~G~~iNP~~~~GQi~GG~~qGiG~aL~Ee~~~d~-~G~ 648 (755)
T 3nvz_C 570 YSFETNSGNAFHYFTYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLFTLEELHYSP-EGS 648 (755)
T ss_dssp CBTTTTBSCSCSEEEEEEEEEEEEEETTTCCEEEEEEEEEEECBSCSCHHHHHHHHHHHHHHHHHHHHTCCCCBCT-TSC
T ss_pred cccccCCCCCccccceEEEEEEEEEECCCCCEEEEEEEEEEeCCccCCHHHHHHHHHhhHHHHHHHHhhCceEECC-CCC
Confidence 12345678899999999999999999999999999999999999999999999999999999999999995 899
Q ss_pred eecCCCCC
Q psy7003 1512 LLTNRTWV 1519 (1520)
Q Consensus 1512 llt~~~w~ 1519 (1520)
++|++.|+
T Consensus 649 ~~t~~~~d 656 (755)
T 3nvz_C 649 LHTRGPST 656 (755)
T ss_dssp BCCCSTTT
T ss_pred CCCCCHHh
Confidence 99999885
No 6
>2w3s_B Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 1jrp_B* 2w3r_B* 1jro_B* 2w54_B* 2w55_B*
Probab=100.00 E-value=2e-132 Score=1269.52 Aligned_cols=629 Identities=28% Similarity=0.411 Sum_probs=574.6
Q ss_pred CCCCCCCccchhhhcccccccccCCCCCCCcEEEEEEecCCCCeEeecCCchhhhcCCCEEEEEeccCCCCCCCCCCCCC
Q psy7003 741 PLTKPLPKIDAITQCAGEAEYVNDLPQLSEEYFASVVLADRGPAKIQSIDSTLALAYPGVHTFVHAKDIPGKNLAIPAAW 820 (1520)
Q Consensus 741 ~iGk~~~r~da~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~ahA~I~sID~s~A~a~PGV~avvt~~Dipg~n~~~~~~~ 820 (1520)
+|||+++|+|+..||||+++|++|+|.+|||||+++||||++||+|+|||+++|+++|||++|+|++|+|+.|.+.
T Consensus 2 ~iG~~~~R~d~~~kvtG~a~Y~~D~~~~~gmL~a~~vrSp~a~a~I~siD~s~A~~~pGV~~V~t~~d~p~~~~~g---- 77 (777)
T 2w3s_B 2 SVGKPLPHDSARAHVTGQARYLDDLPCPANTLHLAFGLSTEASAAITGLDLEPVRESPGVIAVFTAADLPHDNDAS---- 77 (777)
T ss_dssp CTTSCCCCTTHHHHHHTCCCCGGGSCCCTTCEEEEEEECSCSSEEEEEEECHHHHTSTTEEEEEEGGGCSSCCCCC----
T ss_pred CCCCCCCCcchHHhccccceeccccCCCCCCEEEEEEECCCCCeEEEEeEhHHHhcCCCcEEEEEcccCCCcccCC----
Confidence 6999999999999999999999999668999999999999999999999999999999999999999999765321
Q ss_pred CCcccccccCCCCcccccccccCCCCCCCCCCCCCCCCcccccccccCeeeecCCEEEEEEECCHHHHHHHcccceEEEe
Q psy7003 821 PGQIFEDEKAYPGVHTFVHAKDIPGKNLAIPAAWPGQIFEDEKLFAENEVEFAGQIIGAIIADNFKSAYEAAKMVKVVYS 900 (1520)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~~~~a~~~V~y~GqpVaaVvAet~~~A~~Aa~lV~VeYe 900 (1520)
....|+|+|++++|+|+||||++|||+|+|+|++|+++|+|+||
T Consensus 78 ------------------------------------~~~~~~~~la~~~Vry~GqpVa~VvA~t~~~A~~Aa~~v~V~ye 121 (777)
T 2w3s_B 78 ------------------------------------PAPSPEPVLATGEVHFVGQPIFLVAATSHRAARIAARKARITYA 121 (777)
T ss_dssp ------------------------------------SSSSCCCSSCCSEECSTTCEEEEEEESSHHHHHHHHTTCEEEEE
T ss_pred ------------------------------------CCCCCcccccCceEEecCCeEEEEEECCHHHHHHHhcceEEEEE
Confidence 12357899999999999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHhhcCCccchhhhhccCCCccccCCCCCchhhHHHHhhcccceEEEEEEEECccccCCCCCCeeEEEEe
Q psy7003 901 DVKTPKLDIKQIVQDGDKARIVEMFKLEPTATKSKFSPDSNARWEILEAGKKLFKIKGAAEFGPQYHYTMEGQTALCVPS 980 (1520)
Q Consensus 901 ~l~~~v~di~~Al~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~vveg~~~~~~q~H~~mEp~~a~A~~~ 980 (1520)
++| +++|+++|+++.++ .++.....+.||+ +++|++++ ++||++|++++|+|+||||++|+|+|+
T Consensus 122 ~lp-~v~~~~~a~~~~~~-~~~~~~~~~~Gd~-----------~~a~a~A~--~vve~~y~~~~~~h~~mEp~~~~A~~~ 186 (777)
T 2w3s_B 122 PRP-AILTLDQALAADSR-FEGGPVIWARGDV-----------ETALAGAA--HLAEGCFEIGGQEHFYLEGQAALALPA 186 (777)
T ss_dssp ECC-CCCSHHHHHHHTCB-SSSSCEEEEESCH-----------HHHHHTCS--EEEEEEEEECCCCCCCSSCCEEEEEEE
T ss_pred cCC-CCCCHHHHhhccCc-cccCccccccCCh-----------hHHhhcCC--eEEEEEEEECCccccCCcCCeEEEEEE
Confidence 998 68999999988542 2222222234544 35799999 999999999999999999999999999
Q ss_pred CCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCCCCCCCchHHHHHHHHHHhcCCcEEEEcChHHHHhcc
Q psy7003 981 EDGVDIYAASQWVTLVQESVAGVLGLPNNRVNVKTRRIGGGYGAKLSRSCYPAVIAAVCSNVINKPVRIVMSIESMMGAL 1060 (1520)
Q Consensus 981 ed~l~V~~sTQ~p~~vq~~vA~~LGlp~~kVrV~~~~vGGgFG~K~~~~~~~~~~AAlaA~~~gRPVrl~~sRee~m~~~ 1060 (1520)
+|+|+||+|||+|+.+|..+|++||||.+||||+++++|||||+|.+.....++.||++|+++||||||+|||+|+|..+
T Consensus 187 ~~~l~v~~stQ~p~~~r~~vA~~Lglp~~~VrV~~~~vGGgFG~K~~~~~~~~~~aA~~A~~~grPVkl~~tR~e~~~~~ 266 (777)
T 2w3s_B 187 EGGVVIHCSSQHPSEIQHKVAHALGLAFHDVRVEMRRMGGGFGGKESQGNHLAIACAVAARATGRPCKMRYDRDDDMVIT 266 (777)
T ss_dssp TTEEEEEESCSCHHHHHHHHHHHHTCCGGGEEEEECCCSCCTTTTTTTTHHHHHHHHHHHHHHSSCEEEECCHHHHHHHS
T ss_pred CCccEEEECCcCHHHHHHHHHHHHCCCHHHEEEEeCCCCCCCCcCccccchHHHHHHHHHHHhCCCEEEEecHHHHhhhc
Confidence 77799999999999999999999999999999999999999999997654567889999999999999999999999999
Q ss_pred CCCCcEEEEEeeeccCCCccccccCCCccchhhhhhhhccceeeeccccccccccCcchhhhhccccceeeeeecccccc
Q psy7003 1061 GGRYPVYATYEIGTIGGNLSIKHEHPEFSSDVFLLLEVVGATITIRDTFGLEQTVSPEEYLSIDMNKKVITYITFCPLIK 1140 (1520)
Q Consensus 1061 ~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1140 (1520)
++||++.++|
T Consensus 267 ~~R~~~~~~~---------------------------------------------------------------------- 276 (777)
T 2w3s_B 267 GKRHDFRIRY---------------------------------------------------------------------- 276 (777)
T ss_dssp CCCCCEEEEE----------------------------------------------------------------------
T ss_pred CCCCceEEEE----------------------------------------------------------------------
Confidence 9999999888
Q ss_pred cccccccceeeeCCCCcEEEEEEEEEEecCCCcccchhhhHhhcccCCCCCCCCceEEEEEEEecCCCCCcccCCCCchh
Q psy7003 1141 NSYYLRTYKCGVDKNGVIQNLSTVFNVDKGMTLNENGFLHVRFGLGQASIYDPSTFRVVANAVRTDKPTYGFTRSPGACE 1220 (1520)
Q Consensus 1141 ~~~~~~~~k~g~d~dG~i~al~~~~~~d~Ga~~~~~~~~~~~~~~~~~~~Y~ipn~r~~~~~v~TN~p~~ga~Rg~G~~q 1220 (1520)
|+|+|+||+|++++++++.|+|+|.+.+..+..+...+..++|++||++++++.|+||++++|||||||.+|
T Consensus 277 --------~~g~d~dG~i~a~~~~~~~d~Ga~~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~Tn~~~~ga~Rg~G~~q 348 (777)
T 2w3s_B 277 --------RIGADASGKLLGADFVHLARCGWSADLSLPVCDRAMLHADGSYFVPALRIESHRLRTNTQSNTAFRGFGGPQ 348 (777)
T ss_dssp --------EEEECTTSCEEEEEEEEEEECCSSCTTHHHHHHHHHHTTTTTBCCSSEEEEEEEECCSSCCCCCCTTTTHHH
T ss_pred --------EEEECCCCCEEEEEEEEEEcCCcccccchhHHHHHHHhcCCccccCCEEEEEEEEeCCCCCCCccCCCChHH
Confidence 999999999999999999999999877766656555668999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHhcCCc---------------------------------hHHHHHHHHHhccChH
Q psy7003 1221 VTAFIEHVMDHIATVVNRDPTDVRIANLRNE---------------------------------DVKKFYQQFRGSVKYK 1267 (1520)
Q Consensus 1221 ~~fa~E~~mD~iA~~lg~DP~e~R~~Nl~~~---------------------------------~~~~~~~~~~~~~~~~ 1267 (1520)
++|++|++||++|++|||||+|||++|++.. ++.+||+++++.++|+
T Consensus 349 ~~fa~E~~mDelA~~lG~DP~e~R~~N~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~~~~l~~~~~~~~~~ 428 (777)
T 2w3s_B 349 GALGMERAIEHLARGMGRDPAELRALNFYDPPERGGLSAPPSPPEPIATKKTQTTHYGQEVADCVLGELVTRLQKSANFT 428 (777)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHTTBCCCC-----------------CCCCBCTTCCBCCCCCHHHHHHHHHHHTTHH
T ss_pred HHHHHHHHHHHHHHHhCcCHHHHHHHhccCcccccccccccccccccCCCCCccCCCCccccCCCHHHHHHHHHHhcCHH
Confidence 9999999999999999999999999999854 3899999999999999
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhccCCccccccceEEEEeccCCC----CcceEEEEEEcCCCeEEEEecCcccCcch
Q psy7003 1268 ERRDAIETFNAVRVLISQYSLRHCFQNNRWRKRGISAVVTLFPLGFY----DVSYAILSVFRRDATVAITTSGIEIGQGL 1343 (1520)
Q Consensus 1268 ~r~~~~~~~n~~~~~~~~~~~~~~~~~~~~~krGig~~~~~~~~g~~----~~~~a~v~v~~~DGsV~i~~g~~e~GQG~ 1343 (1520)
+|+++.+.||+ +|+|+|||||+++..++.++. ++++|.|+| ++||+|+|.+|++|||||+
T Consensus 429 ~r~~~~~~~~~---------------~~~~~~rGiG~a~~~~g~~~~~~~~~~~~a~v~l-~~DG~v~v~~g~~e~GqG~ 492 (777)
T 2w3s_B 429 TRRAEIAAWNS---------------TNRTLARGIALSPVKFGISFTLTHLNQAGALVQI-YTDGSVALNHGGTEMGQGL 492 (777)
T ss_dssp HHHHHHHHHHH---------------TCSSEEEEEEEEEEEEECSCSSGGGCEEEEEEEE-CTTSCEEEEESCCCSSSCH
T ss_pred HHHHHHHHhhc---------------CCCCeeEEEEEEEeeEccccccccCCCCceEEEE-ccCCeEEEEECCccCCCCh
Confidence 99999999988 788889999999999998864 568899997 6799999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCcEEEecCCCCCCCCCCCCcccccccchHHHHHHHHHHHHHHhhhhhhc---------------
Q psy7003 1344 HTKVAQACAYELGIPIEKIVLKPAQNNIFPNAANTGGSTASDNAARCILLCCQELKTRLMPYMDK--------------- 1408 (1520)
Q Consensus 1344 ~T~~aQiaA~~Lgip~e~I~v~~~dT~~~p~~~~t~gS~~t~~~g~Av~~Ac~~l~~rl~~~~~~--------------- 1408 (1520)
+|+++||+|++||||+|+|+|..+||+.+|++++|+|||+|+++|.||++||++||+||++++++
T Consensus 493 ~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~~t~aSr~t~~~G~Av~~Aa~~l~~~l~~~aa~~~~~~~~~l~~~~g~ 572 (777)
T 2w3s_B 493 HAKMVQVAAAVLGIDPVQVRITATDTSKVPNTSATAASSGADMNGMAVKDACETLRGRLAGFVAAREGCAARDVIFDAGQ 572 (777)
T ss_dssp HHHHHHHHHHHHTSCGGGEEECCEETTTSCSCCCSCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCEEETTE
T ss_pred hHHHHHHHHHHHCCCHHHEEEEcCCCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHEEEECCE
Confidence 99999999999999999999999999999999999999999999999999999999999988653
Q ss_pred ------CCCHHHHHHHHhhcCceeEEEEEeeccCC-------CCCCCccccceEEEEEEEEECCCCcEEEEEEEEEEecC
Q psy7003 1409 ------GKSWEKTISDAFERGVDLQVTKSVSSQQT-------PDLLPMYTIPTAAATEVEVDLLTGQHQILRVDILEDTG 1475 (1520)
Q Consensus 1409 ------~~~w~~~~~~a~~~gv~l~~~~~~~~~~~-------~~~~~~~~~~ga~~aEVEVD~~TG~v~V~r~~~~~D~G 1475 (1520)
..+|++++..++..++.|.++++|..... .+.++.+++||++++|||||++||+++|+|+++++|||
T Consensus 573 v~~~~~~~~~~el~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~ga~~aeVeVD~~TG~v~V~r~~~v~D~G 652 (777)
T 2w3s_B 573 VQASGKSWRFAEIVAAAYMARISLSATGFYATPKLSWDRLRGQGRPFLYFAYGAAITEVVIDRLTGENRILRTDILHDAG 652 (777)
T ss_dssp EEETTEEEEHHHHHHHHHHTTCCCEEEEEEECSSCEEETTTTEEECCSCEEEEEEEEEEEEETTTCCEEEEEEEEEEECB
T ss_pred EEECCCcccHHHHHHHhhhcCcceEEEEEEeCCCccccccccCCCCcccceeeeEEEEEEEecCCCEEEEEEEEEEEECC
Confidence 35899999999888888988888753110 11235578999999999999999999999999999999
Q ss_pred cccChHHHhHHhHhHHHHHHHHHHccceeeeCCCceeecCCCCC
Q psy7003 1476 QSINPAIDIGQIQGAFIMGIGLWTFEHQIHDKRTGALLTNRTWV 1519 (1520)
Q Consensus 1476 ~~INP~~~~GQIeGg~vqGiG~aL~Ee~~~d~~~G~llt~~~w~ 1519 (1520)
++|||.+++||||||++||||++|+||+.||+ +|+++|++.|+
T Consensus 653 ~~iNP~~~~GQi~GG~~qGiG~aL~Ee~~~d~-~G~~~t~~~~~ 695 (777)
T 2w3s_B 653 ASLNPALDIGQIEGAYVQGAGWLTTEELVWDH-CGRLMTHAPST 695 (777)
T ss_dssp SCSCHHHHHHHHHHHHHHHHHHTTTCCCCBCT-TSCBSCCSTTT
T ss_pred ccCCHHHHHHHHHhhHHhhhchhheeeeEECC-CCCCCCCChHh
Confidence 99999999999999999999999999999994 79999999885
No 7
>1rm6_A 4-hydroxybenzoyl-COA reductase alpha subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.41.1.1 d.133.1.1 PDB: 1sb3_A*
Probab=100.00 E-value=1.1e-127 Score=1225.87 Aligned_cols=629 Identities=21% Similarity=0.261 Sum_probs=554.8
Q ss_pred CCCCCCCCCCccchhhhcccccccccCCCCCCCcEEEEEEecCCCCeEeecCCchhhhcCCCEEEEEeccCCCCCCCCCC
Q psy7003 738 NLWPLTKPLPKIDAITQCAGEAEYVNDLPQLSEEYFASVVLADRGPAKIQSIDSTLALAYPGVHTFVHAKDIPGKNLAIP 817 (1520)
Q Consensus 738 ~~~~iGk~~~r~da~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~ahA~I~sID~s~A~a~PGV~avvt~~Dipg~n~~~~ 817 (1520)
..++|||+++|+|+..||||+++|++|+ .+|||||+++||||++||||+|||+++|+++|||++|+|++|+|+ |. ..
T Consensus 7 ~~~~iG~~~~R~d~~~kvtG~a~Y~~D~-~~~gmL~a~~vrSp~aharI~siD~s~A~~~pGV~~V~t~~Dip~-~~-g~ 83 (769)
T 1rm6_A 7 QHGTVGVRTPLVDGVEKVTGKAKYTADI-AAPDALVGRILRSPHAHARILAIDTSAAEALEGVIAVCTGAETPV-PF-GV 83 (769)
T ss_dssp --CCTTSCCCCTTHHHHHHTCCCBGGGC-CCTTCEEEEEEECSSSSEEEEEEECHHHHHSTTEEEEEEGGGCCS-CB-CS
T ss_pred ccCcCCCCCcCcchHHhccceeeehhcc-CCCCCEEEEEEECCCCCeEEEeeehhHHhcCCCeEEEEehHHcCC-cc-CC
Confidence 4568999999999999999999999999 899999999999999999999999999999999999999999997 42 11
Q ss_pred CCCCCcccccccCCCCcccccccccCCCCCCCCCCCCCCCCcccccccccCeeeecCCEEEEEEECCHHHHHHHcccceE
Q psy7003 818 AAWPGQIFEDEKAYPGVHTFVHAKDIPGKNLAIPAAWPGQIFEDEKLFAENEVEFAGQIIGAIIADNFKSAYEAAKMVKV 897 (1520)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~~~~a~~~V~y~GqpVaaVvAet~~~A~~Aa~lV~V 897 (1520)
. + ...|+|+|++++|+|+|||||+|||+|+|+|++|+++|+|
T Consensus 84 ~------------------------------------~--~~~~~~~la~~~Vry~Gq~VA~VvA~t~~~A~~A~~~v~V 125 (769)
T 1rm6_A 84 L------------------------------------P--IAENEYPLARDKVRYRGDPVAAVAAIDEVTAEKALALIKV 125 (769)
T ss_dssp S------------------------------------T--TCCCBCSSCSSEECSTTCEEEEEEESSHHHHHHHHHHCEE
T ss_pred C------------------------------------C--CCCCcccccCCEEEEcCCeEEEEEECCHHHHHHHhCCCeE
Confidence 0 0 0256789999999999999999999999999999999999
Q ss_pred EEeeCCCCCCCHHHHhhcCCccchhhhhccCCCccccCCCCCchhhHHHHhhcccceEEEEEEEECccccCCCCCCeeEE
Q psy7003 898 VYSDVKTPKLDIKQIVQDGDKARIVEMFKLEPTATKSKFSPDSNARWEILEAGKKLFKIKGAAEFGPQYHYTMEGQTALC 977 (1520)
Q Consensus 898 eYe~l~~~v~di~~Al~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~vveg~~~~~~q~H~~mEp~~a~A 977 (1520)
+||++| +++|+++|++++++ .+|+....+.-. ...+ ..++.+++|++++ ++||++|++++|+|+||||++|+|
T Consensus 126 eye~lp-~v~~~~~al~~~a~-~~~~~~~~n~~~-~~~~--~~Gd~~~a~a~A~--~vve~~y~~~~~~h~~mEp~~~~A 198 (769)
T 1rm6_A 126 DYEVLP-AYMTPKAAMKAGAI-ALHDDKPNNILR-EVHA--EFGDVAAAFAEAD--LIREKTYTFAEVNHVHMELNATLA 198 (769)
T ss_dssp EEEECC-CCCSHHHHHSTTCC-CSSTTCTTSEEE-EEEE--EESCHHHHHHTCS--EEEEEEEEECCBCCCCSSCCEEEE
T ss_pred EEeeCC-CCCCHHHHhccCCc-eeccCCCCcccc-cccc--ccCChhhhhccCC--EEEEEEEEECCccccCCCCceEEE
Confidence 999998 69999999998863 344321011000 0000 0123346799999 999999999999999999999999
Q ss_pred EEeC--CeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCCCCCCCchHHHHHHHHHHhcCCcEEEEcChHH
Q psy7003 978 VPSE--DGVDIYAASQWVTLVQESVAGVLGLPNNRVNVKTRRIGGGYGAKLSRSCYPAVIAAVCSNVINKPVRIVMSIES 1055 (1520)
Q Consensus 978 ~~~e--d~l~V~~sTQ~p~~vq~~vA~~LGlp~~kVrV~~~~vGGgFG~K~~~~~~~~~~AAlaA~~~gRPVrl~~sRee 1055 (1520)
+|++ |+|+||+|||+|+.+|..+|++||||.+||||+++++|||||+|..... +.+.||++|+++||||||+|||+|
T Consensus 199 ~~~~~~g~l~v~~stQ~p~~~r~~~A~~Lglp~~~VrV~~~~vGGgFG~K~~~~~-~~~~aA~~A~~~grPVk~~~tR~e 277 (769)
T 1rm6_A 199 EYDPVRDMLTLNTTTQVPYYVHLKVAACLQMDSARIRVIKPFLGGGFGARTEALH-FEIIAGLLARKAKGTVRLLQTREE 277 (769)
T ss_dssp EEETTTTEEEEEECCSCHHHHHHHHHHHHTCCGGGEEEECCBCCCCTTTTSSCCH-HHHHHHHHHHHHTSEEEEECCHHH
T ss_pred EEeCCCCeEEEEECCcCHHHHHHHHHHHhCCCHHHEEEEeCCCCCCCCCcccccc-HHHHHHHHHHHhCCCEEEEecHHH
Confidence 9996 6899999999999999999999999999999999999999999998642 578899999999999999999999
Q ss_pred HHhccCCCCcEEEEEeeeccCCCccccccCCCccchhhhhhhhccceeeeccccccccccCcchhhhhccccceeeeeec
Q psy7003 1056 MMGALGGRYPVYATYEIGTIGGNLSIKHEHPEFSSDVFLLLEVVGATITIRDTFGLEQTVSPEEYLSIDMNKKVITYITF 1135 (1520)
Q Consensus 1056 ~m~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1135 (1520)
+|..+++||++.++|
T Consensus 278 ~~~~~~~R~~~~~~~----------------------------------------------------------------- 292 (769)
T 1rm6_A 278 TFIAHRGRPWTEVKM----------------------------------------------------------------- 292 (769)
T ss_dssp HHHHCCCBCEEEEEE-----------------------------------------------------------------
T ss_pred HhhhcCCCCCEEEEE-----------------------------------------------------------------
Confidence 999999999999888
Q ss_pred ccccccccccccceeeeCCCCcEEEEEEEEEEecCCCcccchhhhHhhcccCCCCCCCCceEEEEEEEecCCCCCcccCC
Q psy7003 1136 CPLIKNSYYLRTYKCGVDKNGVIQNLSTVFNVDKGMTLNENGFLHVRFGLGQASIYDPSTFRVVANAVRTDKPTYGFTRS 1215 (1520)
Q Consensus 1136 ~~~~~~~~~~~~~k~g~d~dG~i~al~~~~~~d~Ga~~~~~~~~~~~~~~~~~~~Y~ipn~r~~~~~v~TN~p~~ga~Rg 1215 (1520)
|+|+|+||+|++++++++.|+|+|.+.+..+..+...+..++|+|||++++++.|+||++|+|||||
T Consensus 293 -------------~~g~d~dG~i~a~~~~~~~d~Gay~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg 359 (769)
T 1rm6_A 293 -------------KIGLKKDGKIAALALEATQAGGAYAGYGIITILYTGALMHGLYHIPAIKHDAWRVYTNTPPCGAMRG 359 (769)
T ss_dssp -------------EEEECTTSCEEEEEEEEEEECCSSCTTHHHHHHHHHHTTSSSBCCSCEEEEEEEECCSSSCCCCCSS
T ss_pred -------------EEEECCCCeEEEEEEEEEEeCCcCcccchHHHHHHHHhcCCCcCCCcEEEEEEEEECCCCCCccccC
Confidence 9999999999999999999999998877655555555688999999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHHHHhCCCHHHHHHHhcCC--ch------------HHHHHHHHHhccChHHHHHHHHHHhhhhh
Q psy7003 1216 PGACEVTAFIEHVMDHIATVVNRDPTDVRIANLRN--ED------------VKKFYQQFRGSVKYKERRDAIETFNAVRV 1281 (1520)
Q Consensus 1216 ~G~~q~~fa~E~~mD~iA~~lg~DP~e~R~~Nl~~--~~------------~~~~~~~~~~~~~~~~r~~~~~~~n~~~~ 1281 (1520)
||.+|++|++|++||++|++|||||+|||++|+.. .. +.+||+++++.++|++|+++.
T Consensus 360 ~G~~q~~fa~E~~mDelA~~lg~DP~e~R~~N~~~~~~~~~~~g~~~~s~~~~~~l~~~~~~~~w~~r~~~~-------- 431 (769)
T 1rm6_A 360 HGTVDTRAAFEALLTEMGEELGIDSLKIRQINMLPQIPYVTMYAQRVMSYGVPECLEKVKAASGWEERKGKL-------- 431 (769)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHTCCHHHHHHHTBCSSSSEECTTCCEECCCCHHHHHHHHHHHHTHHHHTTCS--------
T ss_pred CChHHHHHHHHHHHHHHHHHHCcCHHHHHHHhCCCCCCCcCCCCccccCCCHHHHHHHHHHhCCchhhhhhh--------
Confidence 99999999999999999999999999999999973 33 899999999999998763211
Q ss_pred hhhhhhhhhhhccCCccccccceEEEEeccCCC--------CcceEEEEEEcCCCeEEEEecCcccCcchHHHHHHHHHH
Q psy7003 1282 LISQYSLRHCFQNNRWRKRGISAVVTLFPLGFY--------DVSYAILSVFRRDATVAITTSGIEIGQGLHTKVAQACAY 1353 (1520)
Q Consensus 1282 ~~~~~~~~~~~~~~~~~krGig~~~~~~~~g~~--------~~~~a~v~v~~~DGsV~i~~g~~e~GQG~~T~~aQiaA~ 1353 (1520)
.+| ||+|+++..++.++. +++.|.|+| ++||+|.|.+|++|||||++|+++||||+
T Consensus 432 -------------~~g--rG~Gia~~~~~~g~~~~~~~~~~~~~~a~v~l-~~dG~v~v~~g~~e~GqG~~T~~aQiaAe 495 (769)
T 1rm6_A 432 -------------PKG--RGLGIALSHFVSGTSTPKHWTGEPHATVNLKL-DFDGGITLLTGAADIGQGSNTMASQVAAE 495 (769)
T ss_dssp -------------CTT--EEEEEEEEEEESSCSSCSSCCCCCSEEEEEEE-CTTCCEEEEECCCCSSSCHHHHHHHHHHH
T ss_pred -------------ccC--ceEEEEEEEEecccCccccccCCCCccEEEEE-eCCCeEEEEECCccCCCCHHHHHHHHHHH
Confidence 123 899999999888754 568899996 68999999999999999999999999999
Q ss_pred HhCCCCCcEEEecCCCCCCCCCCCCcccccccchHHHHHHHHHHHHHHhhhhhhc------------------------C
Q psy7003 1354 ELGIPIEKIVLKPAQNNIFPNAANTGGSTASDNAARCILLCCQELKTRLMPYMDK------------------------G 1409 (1520)
Q Consensus 1354 ~Lgip~e~I~v~~~dT~~~p~~~~t~gS~~t~~~g~Av~~Ac~~l~~rl~~~~~~------------------------~ 1409 (1520)
+||||+|+|+|..+||+.+|++++|+|||+|.++|.||++||++||+||+++++. .
T Consensus 496 ~Lgip~e~V~v~~~DT~~~p~~~~t~aSr~t~~~G~Av~~Aa~~l~~~l~~~aa~~l~~~~~~l~~~~g~v~~~~~~~~~ 575 (769)
T 1rm6_A 496 VLGVRLSRIRVISADSALTPKDNGSYSSRVTFMVGNASISAAEELKGVLVKAAAKKLDAREEDIEVIDEMFMVSGSQDPG 575 (769)
T ss_dssp HHTCCGGGEEEEESBTTTSCCCCCSCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEETTEEEETTCSSCC
T ss_pred HhCCCHHHEEEecCCCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHeEEeCCEEEEccCCCCc
Confidence 9999999999999999999999999999999999999999999999999987531 3
Q ss_pred CCHHHHHHHHhhcCceeEEEEEeeccC-----CCC-----CCCccccceEEEEEEEEECCCCcEEEEEEEEEEecCcccC
Q psy7003 1410 KSWEKTISDAFERGVDLQVTKSVSSQQ-----TPD-----LLPMYTIPTAAATEVEVDLLTGQHQILRVDILEDTGQSIN 1479 (1520)
Q Consensus 1410 ~~w~~~~~~a~~~gv~l~~~~~~~~~~-----~~~-----~~~~~~~~ga~~aEVEVD~~TG~v~V~r~~~~~D~G~~IN 1479 (1520)
.+|++++..++..++++...+.|.... ..+ .++.+++|||+++|||||++||+++|+|+++++|||++||
T Consensus 576 ~~~~el~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ga~~aeVeVD~~TG~v~V~r~~~v~D~G~~iN 655 (769)
T 1rm6_A 576 LSFQEVVKAAMVDSGTITVKGTYTCPTEFQGDKKIRGSAIGATMGFCYAAQVVEASVDEITGKVTAHKVWVAVDVGKALN 655 (769)
T ss_dssp EEHHHHHHHHHTTTCSEEEEEEECCCGGGSCCTTCGGGGTTCCSCEEEEEEEEEEEECTTTCCEEEEEEEEEEECSSCSS
T ss_pred cCHHHHHHhhhhcccccccccceeccccccccccccccccCCCCCcceEEEEEEEEEECCCceEEEEEEEEEEECCccCC
Confidence 689999998887778887766664200 001 2245669999999999999999999999999999999999
Q ss_pred hHHHhHHhHhHHHHHHHHHHccceeeeCCCceeecCCCCC
Q psy7003 1480 PAIDIGQIQGAFIMGIGLWTFEHQIHDKRTGALLTNRTWV 1519 (1520)
Q Consensus 1480 P~~~~GQIeGg~vqGiG~aL~Ee~~~d~~~G~llt~~~w~ 1519 (1520)
|.+++||||||++||||++|+|++.|| + |+++|+|.|+
T Consensus 656 P~~~~gQieGG~~qGiG~aL~Ee~~~d-~-G~~~~~~~~d 693 (769)
T 1rm6_A 656 PLAVEGQTQGGVWMGMGQALSEETVYD-N-GRMVHGNILD 693 (769)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCCCEE-T-TEESCCSTTT
T ss_pred HHHHHHHHHhHHHHHHHHHhcceeEec-C-CEeCCCChhh
Confidence 999999999999999999999999999 3 9999998875
No 8
>1ffv_B CUTL, molybdoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.41.1.1 d.133.1.1 PDB: 1ffu_B*
Probab=100.00 E-value=2.5e-127 Score=1226.33 Aligned_cols=636 Identities=21% Similarity=0.238 Sum_probs=558.6
Q ss_pred CCCCCCCCccchhhhcccccccccCCCCCCCcEEEEEEecCCCCeEeecCCchhhhcCCCEEEEEeccCCCCCCCCCCCC
Q psy7003 740 WPLTKPLPKIDAITQCAGEAEYVNDLPQLSEEYFASVVLADRGPAKIQSIDSTLALAYPGVHTFVHAKDIPGKNLAIPAA 819 (1520)
Q Consensus 740 ~~iGk~~~r~da~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~ahA~I~sID~s~A~a~PGV~avvt~~Dipg~n~~~~~~ 819 (1520)
..|||+++|+|+..||||+++|++|+ .+|||||+++||||++||+|+|||+++|+++|||++|+|++|+|+.+. +
T Consensus 16 ~~iG~~~~R~d~~~kvtG~a~Y~~D~-~~pgmL~a~~vrSp~aharI~sID~s~A~~~PGV~~V~t~~D~p~~~~--~-- 90 (803)
T 1ffv_B 16 AGMGASRLRKEDARFIQGKGNYVDDI-KMPGMLHMDIVRAPIAHGRIKKIHKDAALAMPGVHAVLTAEDLKPLKL--H-- 90 (803)
T ss_dssp TCTTCCCCCSSHHHHTTTCCCCGGGC-CCTTCEEEEEEECSSSSEEEEEEECHHHHHSTTEEEEECHHHHGGGTC--S--
T ss_pred ccCCCCCcCcChHhhcccceeccccc-CCCCCEEEEEEeCCCCCeEEEEeehHHHhcCCCeEEEEehhhccCccc--c--
Confidence 46999999999999999999999999 799999999999999999999999999999999999999999986311 0
Q ss_pred CCCcccccccCCCCcccccccccCCCCCCCCCCCCCCCCcccccccccCeeeecCCEEEEEEECCHHHHHHHcccceEEE
Q psy7003 820 WPGQIFEDEKAYPGVHTFVHAKDIPGKNLAIPAAWPGQIFEDEKLFAENEVEFAGQIIGAIIADNFKSAYEAAKMVKVVY 899 (1520)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~~~~a~~~V~y~GqpVaaVvAet~~~A~~Aa~lV~VeY 899 (1520)
+ .. .....++++|++++|+|+|||||+|||+|+|+|++|+++|+|+|
T Consensus 91 ~---~~------------------------------~~~~~~~~~la~~~Vry~Gq~VA~VvA~t~~~A~~Aa~~v~Vey 137 (803)
T 1ffv_B 91 W---MP------------------------------TLAGDVAAVLADEKVHFQMQEVAIVIADDRYIAADAVEAVKVEY 137 (803)
T ss_dssp E---EE------------------------------CTTSCEEESSCCSEECSTTCEEEEEEESSHHHHHHHHHHCEEEE
T ss_pred c---cc------------------------------ccCCCccccccCceEEEcCCcEEEEEECCHHHHHHHhcCCEEEE
Confidence 0 00 00013578999999999999999999999999999999999999
Q ss_pred eeCCCCCCCHHHHhhcCCccchhhhhccC---------CCccccCCCCCc-hhhHHHHhhcccceEEEEEEEECccccCC
Q psy7003 900 SDVKTPKLDIKQIVQDGDKARIVEMFKLE---------PTATKSKFSPDS-NARWEILEAGKKLFKIKGAAEFGPQYHYT 969 (1520)
Q Consensus 900 e~l~~~v~di~~Al~~~~~~~i~~~~~~~---------~g~~~~~~~~~~-~~~~~~~~~a~~~~vveg~~~~~~q~H~~ 969 (1520)
|++| +++|+++|+++++ +.+|+..... .++......-.. ++.+++|++++ ++||++|++++|+|+|
T Consensus 138 e~lp-~v~~~~~Al~~~a-~~i~~~~~~~~~~~~~~~~~~n~~~~~~~~~~Gd~~~afa~A~--~vve~~y~~~~~~h~~ 213 (803)
T 1ffv_B 138 DELP-VVIDPIDALKPDA-PVLREDLAGKTSGAHGPREHHNHIFTWGAGDKAATDAVFANAP--VTVSQHMYYPRVHPCP 213 (803)
T ss_dssp EECC-CCCCHHHHTSTTC-CCSCGGGTTCCEETTEECSSTTEEEEEEEECHHHHHHHHHHCS--EEEEEEEEECCBCCCC
T ss_pred eeCC-ccCCHHHHhhcCC-ceecccccccccccccccccccccccccccccCChhhhhccCC--EEEEEEEEECCEeccC
Confidence 9998 6999999998876 3344432110 001100000012 45567899999 9999999999999999
Q ss_pred CCCCeeEEEEeC--CeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCCCCCCCchHHHHHHHHHHhcCCcE
Q psy7003 970 MEGQTALCVPSE--DGVDIYAASQWVTLVQESVAGVLGLPNNRVNVKTRRIGGGYGAKLSRSCYPAVIAAVCSNVINKPV 1047 (1520)
Q Consensus 970 mEp~~a~A~~~e--d~l~V~~sTQ~p~~vq~~vA~~LGlp~~kVrV~~~~vGGgFG~K~~~~~~~~~~AAlaA~~~gRPV 1047 (1520)
|||++|+|+|++ |+|+||+|||+|+.+|..+|++||||.+||||+++++|||||+|.....+ .+.||++|+++||||
T Consensus 214 mEp~~~~A~~~~~~g~l~v~~stQ~p~~~r~~lA~~Lglp~~~VrV~~~~vGGgFG~K~~~~~~-~~~aa~~A~~~grPV 292 (803)
T 1ffv_B 214 LETCGCVASFDPIKGDLTTYITSQAPHVVRTVVSMLSGIPESKVRIVSPDIGGGFGNKVGIYPG-YVCAIVASIVLGRPV 292 (803)
T ss_dssp SSCCEEEEEEETTTTEEEEEECCSCHHHHHHHHHHHHCCCGGGEEEECCCCSCCTTTTSSCCHH-HHHHHHHHHHHTSCE
T ss_pred CCCceEEEEEeCCCceEEEEECCCCHHHHHHHHHHHhCCCHHHEEEEeCCCCCCCCccccccHH-HHHHHHHHHHhCCCE
Confidence 999999999985 67999999999999999999999999999999999999999999876432 567899999999999
Q ss_pred EEEcChHHHHhccCCCCcEEEEEeeeccCCCccccccCCCccchhhhhhhhccceeeeccccccccccCcchhhhhcccc
Q psy7003 1048 RIVMSIESMMGALGGRYPVYATYEIGTIGGNLSIKHEHPEFSSDVFLLLEVVGATITIRDTFGLEQTVSPEEYLSIDMNK 1127 (1520)
Q Consensus 1048 rl~~sRee~m~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1127 (1520)
||+|||+|+|..+++||++.++|
T Consensus 293 kl~~tR~e~~~~~~~R~~~~~~~--------------------------------------------------------- 315 (803)
T 1ffv_B 293 KWVEDRVENISTTAFARDYHMDG--------------------------------------------------------- 315 (803)
T ss_dssp EEECCHHHHHHHSCEECCEEEEE---------------------------------------------------------
T ss_pred EEEechHHHhhhcCCCCCeEEEE---------------------------------------------------------
Confidence 99999999999999999999888
Q ss_pred ceeeeeecccccccccccccceeeeCCCCcEEEEEEEEEEecCCCcc-cchhhhHhh-cccCCCCCCCCceEEEEEEEec
Q psy7003 1128 KVITYITFCPLIKNSYYLRTYKCGVDKNGVIQNLSTVFNVDKGMTLN-ENGFLHVRF-GLGQASIYDPSTFRVVANAVRT 1205 (1520)
Q Consensus 1128 ~~~~~~~~~~~~~~~~~~~~~k~g~d~dG~i~al~~~~~~d~Ga~~~-~~~~~~~~~-~~~~~~~Y~ipn~r~~~~~v~T 1205 (1520)
|+|+|+||+|++++++++.|+|+|.. .+..+..+. .....++|+|||++++++.|+|
T Consensus 316 ---------------------~~g~d~dG~i~a~~~~~~~d~Gay~~~~~~~v~~~~~~~~~~~~Y~ipn~~~~~~~v~T 374 (803)
T 1ffv_B 316 ---------------------ELAATPDGKILGLRVNVVADHGAFDACADPTKFPAGLFHICSGSYDIPRAHCSVKGVYT 374 (803)
T ss_dssp ---------------------EEEECTTCCEEEEEEEEEEECCSSCCCCCCTTCTTTTGGGTTTTBCCSEEEEEEEEECC
T ss_pred ---------------------EEEECCCCCEEEEEEEEEecCCcccccccchhHHHHHHhhcCCCccCCcEEEEEEEEEc
Confidence 99999999999999999999999965 554443322 2225899999999999999999
Q ss_pred CCCCCc-ccCCCCc-hhHHHHHHHHHHHHHHHhCCCHHHHHHHhcCCc----------------hHHHHHHHHHhccChH
Q psy7003 1206 DKPTYG-FTRSPGA-CEVTAFIEHVMDHIATVVNRDPTDVRIANLRNE----------------DVKKFYQQFRGSVKYK 1267 (1520)
Q Consensus 1206 N~p~~g-a~Rg~G~-~q~~fa~E~~mD~iA~~lg~DP~e~R~~Nl~~~----------------~~~~~~~~~~~~~~~~ 1267 (1520)
|++|+| ||||||. +|++|++|++||++|++|||||+|||++|+++. ++.+||+++++.++|+
T Consensus 375 N~~p~g~a~Rg~G~~~q~~fa~E~~mDelA~~lG~DP~e~R~~N~~~~~~~p~~~~~g~~~~~~~~~~~l~~~~~~~~w~ 454 (803)
T 1ffv_B 375 NKAPGGVAYXXSFRVTEAVYLIERMVDVLAQKLNMDKAEIRAKNFIRKEQFPYTTQFGFEYDSGDYHTALKKVLDAVDYP 454 (803)
T ss_dssp SSCCEESCSSCTTTHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHBCCGGGCSEECTTSCEECCCCHHHHHHHHHHHHTHH
T ss_pred CCCCCccceeccCCCchhHHHHHHHHHHHHHHHCcCHHHHHHHhCCCCCcCccccCCCcccCCccHHHHHHHHHHHCCch
Confidence 999999 9999999 999999999999999999999999999999842 4899999999999999
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhccCC-ccccccceEEEEeccCCCC-----------cceEEEEEEcCCCeEEEEec
Q psy7003 1268 ERRDAIETFNAVRVLISQYSLRHCFQNNR-WRKRGISAVVTLFPLGFYD-----------VSYAILSVFRRDATVAITTS 1335 (1520)
Q Consensus 1268 ~r~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~krGig~~~~~~~~g~~~-----------~~~a~v~v~~~DGsV~i~~g 1335 (1520)
+|++..+.||+ +|+ |++||+|+++..++.+++. ++.|.|+| ++||+|+|.+|
T Consensus 455 ~~~~~~~~~~~---------------~g~~~~~rGiG~a~~~~~~g~~~~~~~~~~~~~~~~~a~v~l-~~dG~v~v~~g 518 (803)
T 1ffv_B 455 ALRAEQAARRA---------------DPNSPTLMGIGLVTFTEVVGAGPSKMCDILGVGMFDSCEIRI-HPTGSAIARMG 518 (803)
T ss_dssp HHHHHHHHHHH---------------CTTCSEEEEEEEEEEECCBCCCCTTTCEETTEESCEEEEEEE-CTTSCEEEEES
T ss_pred hHHHHhHhhhc---------------cCCCcceEEEEEEEEEEeccccccccccccccCCcccEEEEE-ecCCeEEEEEC
Confidence 88888888877 788 6889999999999988643 58899996 67999999999
Q ss_pred CcccCcchHHHHHHHHHHHhCCCCCcEEEecCCCCCCCCCCCCcccccccchHHHHHHHHHHHHHHhhhhhhc-------
Q psy7003 1336 GIEIGQGLHTKVAQACAYELGIPIEKIVLKPAQNNIFPNAANTGGSTASDNAARCILLCCQELKTRLMPYMDK------- 1408 (1520)
Q Consensus 1336 ~~e~GQG~~T~~aQiaA~~Lgip~e~I~v~~~dT~~~p~~~~t~gS~~t~~~g~Av~~Ac~~l~~rl~~~~~~------- 1408 (1520)
++|||||++|+++||+|++||||+|+|+|..+||+.+|++++|+|||+|.++|.||++||++||+||++++++
T Consensus 519 ~~e~GqG~~T~~aQiaAe~LGi~~e~V~v~~~DT~~~p~~~~t~aSr~t~~~G~Av~~Aa~~l~~~l~~~aa~~l~~~~~ 598 (803)
T 1ffv_B 519 TITQGQGHQTTYAQIIATELGIPSEVIQVEEGDTSTAPYGLGTYGSRSTPVAGAAIALAARKIHAKARKIAAHMLEVNEN 598 (803)
T ss_dssp CCCSSSCHHHHHHHHHHHHHTCCGGGEEEECCBTTTSCCCCCSCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCGG
T ss_pred CcCCCCCHHHHHHHHHHHHHCCCHHHEEEecCCCCCCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999987642
Q ss_pred -----------------CCCHHHHHHHHhhc---Cc--eeEEEEEeeccCCCCCCCccccceEEEEEEEEECCCCcEEEE
Q psy7003 1409 -----------------GKSWEKTISDAFER---GV--DLQVTKSVSSQQTPDLLPMYTIPTAAATEVEVDLLTGQHQIL 1466 (1520)
Q Consensus 1409 -----------------~~~w~~~~~~a~~~---gv--~l~~~~~~~~~~~~~~~~~~~~~ga~~aEVEVD~~TG~v~V~ 1466 (1520)
..+|++++..+|.. ++ .|.++++|. +. ..+++||++++|||||++||+++|+
T Consensus 599 ~l~~~~g~v~~~~~~~~~~~~~el~~~a~~~~~~~~~~gl~~~~~~~----~~--~~~~~~ga~~aeVeVD~~TG~v~V~ 672 (803)
T 1ffv_B 599 DLDWEVDRFKVKGDDSKFKTMADIAWQAYHQPPAGLEPGLEAVHYYD----PP--NFTYPFGIYLCVVDIDRATGETKVR 672 (803)
T ss_dssp GEEECSSEEEESSCTTCEEEHHHHHHHHHHCCCTTCCSSEEEEEEEC----CS--SCBCCEEEEEEEEEEETTTCCEEEE
T ss_pred HEEEeCCEEEEcCCCCCccCHHHHHHHHHhccCcccccceeeeeeec----CC--CCCcceeEEEEEEEEEcCCCeEEEE
Confidence 26899999887532 22 457766662 21 2356899999999999999999999
Q ss_pred EEEEEEecCcccChHHHhHHhHhHHHHHHHHHHccceeeeCCCceeecCCCCC
Q psy7003 1467 RVDILEDTGQSINPAIDIGQIQGAFIMGIGLWTFEHQIHDKRTGALLTNRTWV 1519 (1520)
Q Consensus 1467 r~~~~~D~G~~INP~~~~GQIeGg~vqGiG~aL~Ee~~~d~~~G~llt~~~w~ 1519 (1520)
|+++++|||++|||.+++||||||++||||++|+||+.|| ++|+++|+|.|+
T Consensus 673 r~~~v~D~G~~iNP~~~~gQieGG~~qGiG~aL~Ee~~~d-~~G~~~~~~~~d 724 (803)
T 1ffv_B 673 RFYALDDCGTRINPMIIEGQIHGGLTEGYAVAMGQQMPFD-AQGNLLGNTLMD 724 (803)
T ss_dssp EEEEEEECBSCSCHHHHHHHHHHHHHHHHHHHHTCCCCBC-TTCCBCSCSTTT
T ss_pred EEEEEEECCccCCHHHHHHHHHHHHHHHHHHHHhCceEEC-CCCCCCCCCHhh
Confidence 9999999999999999999999999999999999999999 479999999875
No 9
>1n62_B Carbon monoxide dehydrogenase large chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.41.1.1 d.133.1.1 PDB: 1n5w_B* 1n61_B* 1n60_B* 1n63_B* 1zxi_B*
Probab=100.00 E-value=3.1e-127 Score=1227.30 Aligned_cols=637 Identities=20% Similarity=0.228 Sum_probs=555.5
Q ss_pred CCCCCCCCCccchhhhcccccccccCCCCCCCcEEEEEEecCCCCeEeecCCchhhhcCCCEEEEEeccCCCCCCCCCCC
Q psy7003 739 LWPLTKPLPKIDAITQCAGEAEYVNDLPQLSEEYFASVVLADRGPAKIQSIDSTLALAYPGVHTFVHAKDIPGKNLAIPA 818 (1520)
Q Consensus 739 ~~~iGk~~~r~da~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~ahA~I~sID~s~A~a~PGV~avvt~~Dipg~n~~~~~ 818 (1520)
.+.|||+++|+|+..||||+++|++|+ .+|||||+++||||++||+|+|||+++|+++|||++|+|++|+|+.| . +.
T Consensus 18 ~~~iG~~~~R~d~~~kvtG~a~Y~~D~-~~pgmL~a~~vrSp~aha~I~sID~s~A~~~PGV~~V~t~~D~p~~~-~-~~ 94 (809)
T 1n62_B 18 LQGMGCKRKRVEDIRFTQGKGNYVDDV-KLPGMLFGDFVRSSHAHARIKSIDTSKAKALPGVFAVLTAADLKPLN-L-HY 94 (809)
T ss_dssp HTCTTCCCCCTHHHHHTTTCCCBGGGC-CCTTCEEEEEEECSCSSEEEEEEECHHHHHSTTEEEEEEHHHHGGGT-C-SE
T ss_pred hccCCCCCcCcchHHhccceeeehhhc-CCCCCEEEEEEeCCCCceEEEecchHHHhhCCCeEEEEEhHHccccc-c-cc
Confidence 456999999999999999999999999 79999999999999999999999999999999999999999999754 1 10
Q ss_pred CCCCcccccccCCCCcccccccccCCCCCCCCCCCCCCCCcccccccccCeeeecCCEEEEEEECCHHHHHHHcccceEE
Q psy7003 819 AWPGQIFEDEKAYPGVHTFVHAKDIPGKNLAIPAAWPGQIFEDEKLFAENEVEFAGQIIGAIIADNFKSAYEAAKMVKVV 898 (1520)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~~~~a~~~V~y~GqpVaaVvAet~~~A~~Aa~lV~Ve 898 (1520)
. . .....++++|++++|+|+|||||+|||+|+|+|++|+++|+|+
T Consensus 95 ~---~--------------------------------~~~~~~~~~la~~~Vry~Gq~VA~VvA~t~~~A~~Aa~~v~Ve 139 (809)
T 1n62_B 95 M---P--------------------------------TLAGDVQAVLADEKVLFQNQEVAFVVAKDRYVAADAIELVEVD 139 (809)
T ss_dssp E---E--------------------------------CTTSSEEESSCSSEECSTTCEEEEEEESSHHHHHHHHHHCEEE
T ss_pred c---c--------------------------------ccCCCCcccccCceEEEcCCcEEEEEECCHHHHHHHhCcceEE
Confidence 0 0 0002467899999999999999999999999999999999999
Q ss_pred EeeCCCCCCCHHHHhhcCCccchhhhhccC---------CCccccCCCCCc-hhhHHHHhhcccceEEEEEEEECccccC
Q psy7003 899 YSDVKTPKLDIKQIVQDGDKARIVEMFKLE---------PTATKSKFSPDS-NARWEILEAGKKLFKIKGAAEFGPQYHY 968 (1520)
Q Consensus 899 Ye~l~~~v~di~~Al~~~~~~~i~~~~~~~---------~g~~~~~~~~~~-~~~~~~~~~a~~~~vveg~~~~~~q~H~ 968 (1520)
||++| +++|+++|+++++ +.+|+..... .+++.....-.. ++.+++|++|+ ++||++|++++|+|+
T Consensus 140 ye~lp-~v~~~~~Al~~~a-~~i~~~~~~~~~~~~~~~~~~n~~~~~~~~~~Gd~~~afa~A~--~vve~~y~~~~~~h~ 215 (809)
T 1n62_B 140 YEPLP-VLVDPFKAMEPDA-PLLREDIKDKMTGAHGARKHHNHIFRWEIGDKEGTDATFAKAE--VVSKDMFTYHRVHPS 215 (809)
T ss_dssp EEECC-CCCCGGGTTSTTC-CCCCGGGTTCCEETTEECSSTTEEEEEEEECHHHHHHHHHHCS--EEEEEEEEECCBCCC
T ss_pred EEeCC-CcCCHHHHhhcCC-ceecccccccccccccccccccccccccccccCChhhhhccCC--EEEEEEEEECCEecc
Confidence 99998 6999999998876 3344432110 001100000012 45567899999 999999999999999
Q ss_pred CCCCCeeEEEEeC--CeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCCCCCCCchHHHHHHHHHHhcCCc
Q psy7003 969 TMEGQTALCVPSE--DGVDIYAASQWVTLVQESVAGVLGLPNNRVNVKTRRIGGGYGAKLSRSCYPAVIAAVCSNVINKP 1046 (1520)
Q Consensus 969 ~mEp~~a~A~~~e--d~l~V~~sTQ~p~~vq~~vA~~LGlp~~kVrV~~~~vGGgFG~K~~~~~~~~~~AAlaA~~~gRP 1046 (1520)
||||++|+|+|++ |+|+||+|||+|+.+|..+|++||||.+||||+++++|||||+|.....+ .+.||++|+++|||
T Consensus 216 ~mEp~~~~A~~~~~~g~l~v~~stQ~p~~~r~~~A~~Lglp~~~VrV~~~~vGGgFG~K~~~~~~-~~~aA~~A~~~grP 294 (809)
T 1n62_B 216 PLETCQCVASMDKIKGELTLWGTFQAPHVIRTVVSLISGLPEHKIHVIAPDIGGGFGNKVGAYSG-YVCAVVASIVLGVP 294 (809)
T ss_dssp CSSCCEEEEEEETTTTEEEEEECCSSHHHHHHHHHHHHCCCGGGEEEECCBCSCCTTTTSSCCHH-HHHHHHHHHHHSSC
T ss_pred CCCCceEEEEEeCCCCeEEEEECCcChHHHHHHHHHHhCCCHHHEEEEeCCCCCCCccccccchH-HHHHHHHHHHhCCC
Confidence 9999999999985 67999999999999999999999999999999999999999999876432 56799999999999
Q ss_pred EEEEcChHHHHhccCCCCcEEEEEeeeccCCCccccccCCCccchhhhhhhhccceeeeccccccccccCcchhhhhccc
Q psy7003 1047 VRIVMSIESMMGALGGRYPVYATYEIGTIGGNLSIKHEHPEFSSDVFLLLEVVGATITIRDTFGLEQTVSPEEYLSIDMN 1126 (1520)
Q Consensus 1047 Vrl~~sRee~m~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1126 (1520)
|||+|||+|+|..+++||++.++|
T Consensus 295 Vkl~~tR~e~~~~~~~R~~~~~~~-------------------------------------------------------- 318 (809)
T 1n62_B 295 VKWVEDRMENLSTTSFARDYHMTT-------------------------------------------------------- 318 (809)
T ss_dssp EEEECCHHHHHHHSCEECCEEEEE--------------------------------------------------------
T ss_pred EEEEechHHHhhhcCCCCCeEEEE--------------------------------------------------------
Confidence 999999999999999999999888
Q ss_pred cceeeeeecccccccccccccceeeeCCCCcEEEEEEEEEEecCCCcc-cchhhhHhh-cccCCCCCCCCceEEEEEEEe
Q psy7003 1127 KKVITYITFCPLIKNSYYLRTYKCGVDKNGVIQNLSTVFNVDKGMTLN-ENGFLHVRF-GLGQASIYDPSTFRVVANAVR 1204 (1520)
Q Consensus 1127 ~~~~~~~~~~~~~~~~~~~~~~k~g~d~dG~i~al~~~~~~d~Ga~~~-~~~~~~~~~-~~~~~~~Y~ipn~r~~~~~v~ 1204 (1520)
|+|+|+||+|++++++++.|+|+|.. .+..+..+. .....++|+|||++++++.|+
T Consensus 319 ----------------------~~g~d~dG~i~a~~~~~~~d~Gay~~~~~~~v~~~~~~~~~~~~Y~ipn~~~~~~~v~ 376 (809)
T 1n62_B 319 ----------------------ELAATKDGKILAMRCHVLADHGAFDACADPSKWPAGFMNICTGSYDMPVAHLAVDGVY 376 (809)
T ss_dssp ----------------------EEEECTTCCEEEEEEEEEEECCSSCCCCCCTTCTTTTGGGTTTTBCCSCEEEEEEEEC
T ss_pred ----------------------EEEECCCCcEEEEEEEEEEeCCcCcccccchhhhhhhhhhcCCCcCCCcEEEEEEEEE
Confidence 99999999999999999999999965 554443332 222589999999999999999
Q ss_pred cCCCCCc-ccCCCCc-hhHHHHHHHHHHHHHHHhCCCHHHHHHHhcCCc----------------hHHHHHHHHHhccCh
Q psy7003 1205 TDKPTYG-FTRSPGA-CEVTAFIEHVMDHIATVVNRDPTDVRIANLRNE----------------DVKKFYQQFRGSVKY 1266 (1520)
Q Consensus 1205 TN~p~~g-a~Rg~G~-~q~~fa~E~~mD~iA~~lg~DP~e~R~~Nl~~~----------------~~~~~~~~~~~~~~~ 1266 (1520)
||++|+| ||||||. +|++|++|++||++|++|||||+|||++|++.. ++.+||+++++.++|
T Consensus 377 TN~~~~g~a~Rg~G~~~q~~fa~E~~mDelA~~lG~DP~e~R~~N~~~~~~~p~~~~~g~~~~~~~~~~~l~~~~~~~~w 456 (809)
T 1n62_B 377 TNKASGGVAYRCSFRVTEAVYAIERAIETLAQRLEMDSADLRIKNFIQPEQFPYMAPLGWEYDSGNYPLAMKKAMDTVGY 456 (809)
T ss_dssp CSSCCEESCSSCTTTHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHBCCGGGCSEECTTSCEECCCCHHHHHHHHHHHHTH
T ss_pred CCCCCCCCEecCCCccHHHHHHHHHHHHHHHHHHCcCHHHHHHHhccCCCCCccccCCCcccCCCCHHHHHHHHHHHcCc
Confidence 9999999 9999999 999999999999999999999999999999842 589999999999999
Q ss_pred HHHHHHH----HHHhhhhhhhhhhhhhhhhccCCccccccceEEEEeccCCCC-----------cceEEEEEEcCCCeEE
Q psy7003 1267 KERRDAI----ETFNAVRVLISQYSLRHCFQNNRWRKRGISAVVTLFPLGFYD-----------VSYAILSVFRRDATVA 1331 (1520)
Q Consensus 1267 ~~r~~~~----~~~n~~~~~~~~~~~~~~~~~~~~~krGig~~~~~~~~g~~~-----------~~~a~v~v~~~DGsV~ 1331 (1520)
++|++.. ..||. ..+|++||+|+++..++.+++. ++.|.|+| ++||+|.
T Consensus 457 ~~~~~~~~~~~~~fn~---------------g~~~~~rGiGia~~~~~~g~~~~~~~~~~~~~~~~~a~v~l-~~DG~v~ 520 (809)
T 1n62_B 457 HQLRAEQKAKQEAFKR---------------GETREIMGIGISFFTEIVGAGPSKNCDILGVSMFDSAEIRI-HPTGSVI 520 (809)
T ss_dssp HHHHHHHHHHHHHHHT---------------TSCSEEEEEEEEEEECCBSCCCTTTCEETTEECCEEEEEEE-CTTSCEE
T ss_pred hhhHHhHHhhhhhhcc---------------CCCceeEEEEEEEEEEeecccccccccccccCCcccEEEEE-ecCCeEE
Confidence 8754332 24664 3447889999999999887643 57899996 6799999
Q ss_pred EEecCcccCcchHHHHHHHHHHHhCCCCCcEEEecCCCCCCCCCCCCcccccccchHHHHHHHHHHHHHHhhhhhhc---
Q psy7003 1332 ITTSGIEIGQGLHTKVAQACAYELGIPIEKIVLKPAQNNIFPNAANTGGSTASDNAARCILLCCQELKTRLMPYMDK--- 1408 (1520)
Q Consensus 1332 i~~g~~e~GQG~~T~~aQiaA~~Lgip~e~I~v~~~dT~~~p~~~~t~gS~~t~~~g~Av~~Ac~~l~~rl~~~~~~--- 1408 (1520)
|.+|++|||||++|+++||+|++||||+|+|+|..+||+.+|++++|+|||+|.++|.||++||++||+||++++++
T Consensus 521 v~~g~~e~GqG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~~t~aSr~t~~~G~Av~~Aa~~l~~~l~~~aa~~l~ 600 (809)
T 1n62_B 521 ARMGTKSQGQGHETTYAQIIATELGIPADDIMIEEGNTDTAPYGLGTYGSRSTPTAGAATAVAARKIKAKAQMIAAHMLE 600 (809)
T ss_dssp EEESCCCSSSCHHHHHHHHHHHHHTCCGGGEEEECCBTTTSCCCCCSCTTCTTTTHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEECCCCCCCCHHHHHHHHHHHHhCCCHHHEEEecCCCCCCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987653
Q ss_pred ---------------------CCCHHHHHHHHhhc---Cc--eeEEEEEeeccCCCCCCCccccceEEEEEEEEECCCCc
Q psy7003 1409 ---------------------GKSWEKTISDAFER---GV--DLQVTKSVSSQQTPDLLPMYTIPTAAATEVEVDLLTGQ 1462 (1520)
Q Consensus 1409 ---------------------~~~w~~~~~~a~~~---gv--~l~~~~~~~~~~~~~~~~~~~~~ga~~aEVEVD~~TG~ 1462 (1520)
..+|++++..+|.. ++ .|.++.+|. +. ..+++|||+++|||||++||+
T Consensus 601 ~~~~~l~~~~g~v~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~l~~~~~~~----~~--~~~~~~ga~~aeVeVD~~TG~ 674 (809)
T 1n62_B 601 VHEGDLEWDVDRFRVKGLPEKFKTMKELAWASYNSPPPNLEPGLEAVNYYD----PP--NMTYPFGAYFCIMDIDVDTGV 674 (809)
T ss_dssp SCGGGEEECSSEEEETTEEEEEEEHHHHHHHHHHSCCTTSCSSCEEEEEEC----CS--SCBCCEEEEEEEEEEETTTCC
T ss_pred CCHHHEEEeCCEEEEccCCCCcccHHHHHHHHhhccCccccccceeeeecc----CC--CCccceeEEEEEEEEECCcCe
Confidence 26899999887632 22 457777763 21 245689999999999999999
Q ss_pred EEEEEEEEEEecCcccChHHHhHHhHhHHHHHHHHHHccceeeeCCCceeecCCCCC
Q psy7003 1463 HQILRVDILEDTGQSINPAIDIGQIQGAFIMGIGLWTFEHQIHDKRTGALLTNRTWV 1519 (1520)
Q Consensus 1463 v~V~r~~~~~D~G~~INP~~~~GQIeGg~vqGiG~aL~Ee~~~d~~~G~llt~~~w~ 1519 (1520)
++|+|+++++|||++|||.+++||||||++||||++|+|++.|| ++|+++|+|.|+
T Consensus 675 v~V~r~~~v~D~G~viNP~~~~gQieGG~~qGlG~aL~Ee~~~d-~~G~~~~~~~~d 730 (809)
T 1n62_B 675 AKTRRFYALDDCGTRINPMIIEGQVHGGLTEAFAVAMGQEIRYD-EQGNVLGASFMD 730 (809)
T ss_dssp EEEEEEEEEEECBSCSCHHHHHHHHHHHHHHHHHHHHTCCCEEC-TTCCEESCSTTT
T ss_pred EEEEEEEEEEECCccCCHHHHHHHHHHHHHHHHHHHHhCceEEC-CCCCCCCCChhh
Confidence 99999999999999999999999999999999999999999999 479999998875
No 10
>1t3q_B Quinoline 2-oxidoreductase large subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.41.1.1 d.133.1.1
Probab=100.00 E-value=2.1e-126 Score=1216.63 Aligned_cols=621 Identities=21% Similarity=0.240 Sum_probs=545.7
Q ss_pred CCCCCCCccchhhhcccccccccCCCCCCCcEEEEEEecCCCCeEeecCCchhhhcCCCEEEEEeccCCCCCC-CCCCCC
Q psy7003 741 PLTKPLPKIDAITQCAGEAEYVNDLPQLSEEYFASVVLADRGPAKIQSIDSTLALAYPGVHTFVHAKDIPGKN-LAIPAA 819 (1520)
Q Consensus 741 ~iGk~~~r~da~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~ahA~I~sID~s~A~a~PGV~avvt~~Dipg~n-~~~~~~ 819 (1520)
.|||+++|+|+..||||+++|++|+ .+|||||+++||||++||||+|||+++|+++|||++|+|++|+|+.| .....
T Consensus 13 ~iG~~~~R~d~~~kvtG~a~Y~~D~-~~pgmL~a~~vrSp~aharI~sID~s~A~~~pGV~~V~t~~D~p~~~~~~~~~- 90 (788)
T 1t3q_B 13 SIGTSVLRREDTRLLTGRGRYIADL-VLSGMLHVASLRSPFAHARIVSIDVADAQALPGVELVWCGADVAELSQGIVAT- 90 (788)
T ss_dssp STTSCCCCTTHHHHHTTCCCBGGGC-CCTTCEEEEEEECSSSSEEEEEEECHHHHHSTTEEEEEEHHHHHTTCCCEEEC-
T ss_pred cCCCCCcCcchHHhCccceeccccc-CCCCCEEEEEEecCCCCEEEEEeEhHHHhhCCCeEEEEeHHHCcccccccCcc-
Confidence 5999999999999999999999999 89999999999999999999999999999999999999999999754 11000
Q ss_pred CCCcccccccCCCCcccccccccCCCCCCCCCCCCCCCCcccccccccCeeeecCCEEEEEEECCHHHHHHHcccceEEE
Q psy7003 820 WPGQIFEDEKAYPGVHTFVHAKDIPGKNLAIPAAWPGQIFEDEKLFAENEVEFAGQIIGAIIADNFKSAYEAAKMVKVVY 899 (1520)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~~~~a~~~V~y~GqpVaaVvAet~~~A~~Aa~lV~VeY 899 (1520)
. .. .+......++|++++|+|+|||||+|||+|+|+|++|+++|+|+|
T Consensus 91 -----~--------------------------~~-~~~~~~~~~~la~~~Vry~Gq~VA~VvA~t~~~A~~Aa~~v~Vey 138 (788)
T 1t3q_B 91 -----M--------------------------QV-EGFQTTIQPLLANGVTRFVGEIVAVVVASSRAIAEDAAQLIQVEY 138 (788)
T ss_dssp -----C--------------------------SS-TTCCCEEECSSCCSEECSTTCEEEEEEESSHHHHHHHHTTCEEEE
T ss_pred -----c--------------------------cc-ccccCCccccccCCeEEEcCCeEEEEEECCHHHHHHHhCCCeEEE
Confidence 0 00 000012347899999999999999999999999999999999999
Q ss_pred eeCCCCCCCHHHHhhcCCccchhhhh--------ccCCCccccCCCCCchhhHHHHhhcccceEEEEEEEECccccCCCC
Q psy7003 900 SDVKTPKLDIKQIVQDGDKARIVEMF--------KLEPTATKSKFSPDSNARWEILEAGKKLFKIKGAAEFGPQYHYTME 971 (1520)
Q Consensus 900 e~l~~~v~di~~Al~~~~~~~i~~~~--------~~~~g~~~~~~~~~~~~~~~~~~~a~~~~vveg~~~~~~q~H~~mE 971 (1520)
|++| +++|+++|+++++ .+|+.. ....||+ +++|++|+ ++||++|++++|+|+|||
T Consensus 139 e~lp-~v~~~~~Al~~~a--~i~~~~~~n~~~~~~~~~Gd~-----------~~afa~A~--~vve~~y~~~~~~h~~mE 202 (788)
T 1t3q_B 139 EELP-AVTGIEAALEGEA--RANDTLAGNVVSRTSRARDEL-----------APIFASSA--GVVRGQFSCGRVSACPME 202 (788)
T ss_dssp EECC-CCCSHHHHHHCSC--CSCTTSSSSEEEEEEEEECCC-----------HHHHHHSS--EEEEEEEEECBBCCCCSS
T ss_pred eeCC-CcCCHHHHhhccC--cccCCCCCccccccccccCCh-----------hhhhccCC--cEEEEEEEECCEeccCCC
Confidence 9998 6999999998875 344321 1122333 45799999 999999999999999999
Q ss_pred CCeeEEEEeC--CeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCCCCCCCchHHHHHHHHHHhcCCcEEE
Q psy7003 972 GQTALCVPSE--DGVDIYAASQWVTLVQESVAGVLGLPNNRVNVKTRRIGGGYGAKLSRSCYPAVIAAVCSNVINKPVRI 1049 (1520)
Q Consensus 972 p~~a~A~~~e--d~l~V~~sTQ~p~~vq~~vA~~LGlp~~kVrV~~~~vGGgFG~K~~~~~~~~~~AAlaA~~~gRPVrl 1049 (1520)
|++|+|+|++ |+|+||+|||+|+.+|..+|++||||.+||||+++++|||||+|..... ..+.||++|+++||||||
T Consensus 203 p~~~~A~~~~~~g~l~v~~stQ~p~~~r~~lA~~Lglp~~~VrV~~~~vGGgFG~K~~~~~-~~~~aA~~A~~~grPVk~ 281 (788)
T 1t3q_B 203 TRGAVAQYEWTTQQLILWTATQMPSFVRTMVAMFCAIPEHLIEVRVPDVGGGFGQKAHLHP-EELLVCLLSRALGRPVRW 281 (788)
T ss_dssp CCEEEEEEETTTTEEEEEECCSCHHHHHHHHHHHHTCCGGGEEEECCBCSCCTTTTSSCCH-HHHHHHHHHHHHTSCEEE
T ss_pred CceEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHCCChHHEEEEeCCCCCCCCCCCccch-HHHHHHHHHHHhCCCEEE
Confidence 9999999996 6899999999999999999999999999999999999999999998653 278899999999999999
Q ss_pred EcChHHHHhccCCCCcEEEEEeeeccCCCccccccCCCccchhhhhhhhccceeeeccccccccccCcchhhhhccccce
Q psy7003 1050 VMSIESMMGALGGRYPVYATYEIGTIGGNLSIKHEHPEFSSDVFLLLEVVGATITIRDTFGLEQTVSPEEYLSIDMNKKV 1129 (1520)
Q Consensus 1050 ~~sRee~m~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1129 (1520)
+|||+|+|..+++||++.++|
T Consensus 282 ~~tR~e~~~~~~~R~~~~~~~----------------------------------------------------------- 302 (788)
T 1t3q_B 282 IEDRQENFLGATHAKQQRNEM----------------------------------------------------------- 302 (788)
T ss_dssp ECCHHHHHHHSCBBCCEEEEE-----------------------------------------------------------
T ss_pred EecHHHHhhhcCCCCCeEEEE-----------------------------------------------------------
Confidence 999999999999999999888
Q ss_pred eeeeecccccccccccccceeeeCCCCcEEEEEEEEEEecCCCcc--cchhhhH-hhcccCCCCCCCCceEEEEEEEecC
Q psy7003 1130 ITYITFCPLIKNSYYLRTYKCGVDKNGVIQNLSTVFNVDKGMTLN--ENGFLHV-RFGLGQASIYDPSTFRVVANAVRTD 1206 (1520)
Q Consensus 1130 ~~~~~~~~~~~~~~~~~~~k~g~d~dG~i~al~~~~~~d~Ga~~~--~~~~~~~-~~~~~~~~~Y~ipn~r~~~~~v~TN 1206 (1520)
|+|+|+||+|++++++++.|+|+|.+ .+..+.. +...+..++|+|||++++++.|+||
T Consensus 303 -------------------~~g~d~dG~i~a~~~~~~~d~Gay~~~~~~~~v~~~~~~~~~~~~Y~ipn~~~~~~~v~Tn 363 (788)
T 1t3q_B 303 -------------------GLAFDGDGRFLALENRSITDGGAYNNLPWTQLVESHVGNAVILGVYKVPAVSEESIAVATN 363 (788)
T ss_dssp -------------------EEEECTTCCEEEEEEEEEEECCSSCCTTTCGGGTHHHHHHTTTTTBCCSEEEEEEEEECCS
T ss_pred -------------------EEEECCCCcEEEEEEEEEEcCCCCccccccchhHHHHHHHhcCCCcCCCcEEEEEEEEECC
Confidence 99999999999999999999999987 6665544 4555688999999999999999999
Q ss_pred CCCCcccCCCCchhHHHHHHHHHHHHHHHhCCCHHHHHHHhcCC----------------chHHHHHHHHHhccChH---
Q psy7003 1207 KPTYGFTRSPGACEVTAFIEHVMDHIATVVNRDPTDVRIANLRN----------------EDVKKFYQQFRGSVKYK--- 1267 (1520)
Q Consensus 1207 ~p~~ga~Rg~G~~q~~fa~E~~mD~iA~~lg~DP~e~R~~Nl~~----------------~~~~~~~~~~~~~~~~~--- 1267 (1520)
++|+|||||||.+|++|++|++||++|++|||||+|||++|++. .++.+||+++++.++|+
T Consensus 364 ~~~~ga~Rg~G~~q~~fa~E~~mDelA~~lG~DP~e~R~~N~~~~~~~p~~~~~g~~~~s~~~~~~l~~~~~~~~w~~~~ 443 (788)
T 1t3q_B 364 KCPIGAYRGVGFTAGQIARETLIDRAARQLGLSPFEIRRRNVVMPEDFPFTNRLGQTHREGTYLQTINLLEEMVNPEAFR 443 (788)
T ss_dssp SSCBCCCTTTTHHHHHHHHHHHHHHHHHHHTCCHHHHHHTTBCCGGGCSEECTTSCEECSCCHHHHHHHHHHHHCHHHHH
T ss_pred CCCCCcccCCcHHHHHHHHHHHHHHHHHHHCcCHHHHHHHhcCCCCCccccCCCCcccCCCCHHHHHHHHHHhcCCchhh
Confidence 99999999999999999999999999999999999999999983 24899999999999998
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhccCCccccccceEEEEeccCCCC------------cceEEEEEEcCCCeEEEEec
Q psy7003 1268 ERRDAIETFNAVRVLISQYSLRHCFQNNRWRKRGISAVVTLFPLGFYD------------VSYAILSVFRRDATVAITTS 1335 (1520)
Q Consensus 1268 ~r~~~~~~~n~~~~~~~~~~~~~~~~~~~~~krGig~~~~~~~~g~~~------------~~~a~v~v~~~DGsV~i~~g 1335 (1520)
+|+++.+ + +|+| ||+|+++..++.|++. .+.|.|+| ++||+|.|.+|
T Consensus 444 ~r~~~~~---~---------------~g~~--~G~GiA~~~~~~g~~~~~~~~~~~~~~~~~~a~v~l-~~dG~v~v~~g 502 (788)
T 1t3q_B 444 QRQAEAR---A---------------RGKY--LGLGVSVFNEVTGTGTRTLSFLGTPTTTHDSATVRI-DPTGKVTVTTS 502 (788)
T ss_dssp HHHHHHH---T---------------TTEE--EEEEEEEEEEEESCCHHHHHHTTCCCCCCBEEEEEE-CTTSCEEEEES
T ss_pred hhhhhhh---c---------------cCCe--EEEEEEEEEeccccCcccccccccccCccccEEEEE-ecCCeEEEEEC
Confidence 5544332 2 5666 7888888877777542 68899996 68999999999
Q ss_pred CcccCcchHHHHHHHHHHHhCCCCCcEEEecCCCCCCCCCCCCcccccccchHHHHHHHHHHHHHHhhhhhhc-------
Q psy7003 1336 GIEIGQGLHTKVAQACAYELGIPIEKIVLKPAQNNIFPNAANTGGSTASDNAARCILLCCQELKTRLMPYMDK------- 1408 (1520)
Q Consensus 1336 ~~e~GQG~~T~~aQiaA~~Lgip~e~I~v~~~dT~~~p~~~~t~gS~~t~~~g~Av~~Ac~~l~~rl~~~~~~------- 1408 (1520)
++|||||++|+++||||++||||+|+|+|..+||+ +|++++|+|||+|.++|.||++||++||+||++++++
T Consensus 503 ~~e~GqG~~T~~aQiaAe~LGip~~~V~v~~~DT~-~p~~~~t~aSr~t~~~G~Av~~Aa~~l~~~l~~~aa~~l~~~~~ 581 (788)
T 1t3q_B 503 LASSGQGHETTLAQIAADVLGVPASDVVIQAGSTK-NTYGFGAYASRGAVIGAGSIGRAASIVRERVKQLAGHLLEAASE 581 (788)
T ss_dssp CCCSSSCHHHHHHHHHHHHHTSCGGGEEEECSBTT-SCCBCCSCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCGG
T ss_pred CcCCCCCHHHHHHHHHHHHHCCCHHHEEEecCCCC-CCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHhHhhhCCCHH
Confidence 99999999999999999999999999999999999 9999999999999999999999999999999987642
Q ss_pred -----------------CCCHHHHHHHHhhcCc--------eeEEEEEeeccCCCCCCCccccceEEEEEEEEECCCCcE
Q psy7003 1409 -----------------GKSWEKTISDAFERGV--------DLQVTKSVSSQQTPDLLPMYTIPTAAATEVEVDLLTGQH 1463 (1520)
Q Consensus 1409 -----------------~~~w~~~~~~a~~~gv--------~l~~~~~~~~~~~~~~~~~~~~~ga~~aEVEVD~~TG~v 1463 (1520)
..+|++++..++.... .+.....|. + .+.+++|||+++|||||++||++
T Consensus 582 ~l~~~~g~~~~~~~~~~~~~~~el~~~~~~~~~~l~~~~~~~~~~~~~~~----~--~~~~~~~ga~~aeVeVD~~TG~v 655 (788)
T 1t3q_B 582 DIVIEDGLVHVAGVPAKGMPFAEVVGAAYFADATHPPGFDATLEATATYD----P--SDLVLANGGHAAIVEIDASTYAT 655 (788)
T ss_dssp GEEEETTEEEETTEEEEEEEHHHHHHHHHHCGGGCCTTCCCCCEEEEECC----C--SSCEEEEEEEEEEEEEETTTCCE
T ss_pred HEEEeCCEEEEccCCCCcccHHHHHHHHhhcCcccccCccCCcccccccC----C--CCCCcceEEEEEEEEEECCCceE
Confidence 3689999988764222 122333331 1 23566999999999999999999
Q ss_pred EEEEEEEEEecCcccChHHHhHHhHhHHHHHHHHHHccceeeeCCCceeecCCCCC
Q psy7003 1464 QILRVDILEDTGQSINPAIDIGQIQGAFIMGIGLWTFEHQIHDKRTGALLTNRTWV 1519 (1520)
Q Consensus 1464 ~V~r~~~~~D~G~~INP~~~~GQIeGg~vqGiG~aL~Ee~~~d~~~G~llt~~~w~ 1519 (1520)
+|+|+++++|||++|||.+++||||||++||||++|+|++.||+ +|+++|+|.|+
T Consensus 656 ~V~r~~~v~D~G~~iNP~~~~gQieGG~~qGiG~aL~Ee~~~d~-~G~~~~~~~~d 710 (788)
T 1t3q_B 656 RVTDFFAVEDCGTMINPMIVEGQIRGGIAQAIGQTLLEEVIYDD-FGQLVTTTLMD 710 (788)
T ss_dssp EEEEEEEEEECBSCSCHHHHHHHHHHHHHHHHHHHHTCCBCBCT-TSCBCCCSTTT
T ss_pred EEEEEEEEEECCccCCHHHHHHHHHHhHHHHHHHHhcceeEECC-CCCCCCCChhh
Confidence 99999999999999999999999999999999999999999994 69999999875
No 11
>3hrd_A Nicotinate dehydrogenase large molybdopterin subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=100.00 E-value=5.6e-86 Score=792.73 Aligned_cols=388 Identities=23% Similarity=0.292 Sum_probs=350.1
Q ss_pred CCCCCCCCccchhhhcccccccccCCCCCCCcEEEEEEecCCCCeEeecCCchhhhcCCCEEEEEeccCCCCCCCCCCCC
Q psy7003 740 WPLTKPLPKIDAITQCAGEAEYVNDLPQLSEEYFASVVLADRGPAKIQSIDSTLALAYPGVHTFVHAKDIPGKNLAIPAA 819 (1520)
Q Consensus 740 ~~iGk~~~r~da~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~ahA~I~sID~s~A~a~PGV~avvt~~Dipg~n~~~~~~ 819 (1520)
..|||+++|+|+..||||+++|++|+ .+|||||+++||||++||+|+|||+++|+++|||++|+|++|+|+.|.+.
T Consensus 6 ~~iG~~~~R~d~~~kvtG~a~Y~~Di-~~pgmL~a~~vrSp~a~a~I~siD~s~A~~~pGV~~V~t~~d~p~~~~~~--- 81 (425)
T 3hrd_A 6 QVLGKNKVKVDSLEKVMGTAKFAADY-SFPDMLYAGVFRSTVPHARIVSLDLSKARAIDGVEAVLDYHAIPGKNRFG--- 81 (425)
T ss_dssp SSTBCCCCCTTHHHHHHTCCCBGGGC-CCTTCEEEEEEECSSSSEEEEEEECHHHHTSTTEEEEECGGGCSSCCCBC---
T ss_pred CccCCcCcCcchHHHCCCceeccccc-CCCCCEEEEEEeCCCCCEEEEEeEhHHHhcCCCeEEEEEcccCCCcCcCC---
Confidence 46999999999999999999999999 89999999999999999999999999999999999999999999876431
Q ss_pred CCCcccccccCCCCcccccccccCCCCCCCCCCCCCCCCcccccccccCeeeecCCEEEEEEECCHHHHHHHcccceEEE
Q psy7003 820 WPGQIFEDEKAYPGVHTFVHAKDIPGKNLAIPAAWPGQIFEDEKLFAENEVEFAGQIIGAIIADNFKSAYEAAKMVKVVY 899 (1520)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~~~~a~~~V~y~GqpVaaVvAet~~~A~~Aa~lV~VeY 899 (1520)
....|+|+|++++|+|+|||||+|||+|+|+|++|+++|+|+|
T Consensus 82 -------------------------------------~~~~~~~~la~~~Vr~~G~~VA~VvA~t~~~A~~A~~~v~V~y 124 (425)
T 3hrd_A 82 -------------------------------------IIIKDEPCLVDDKVRRYGDAIAVVAAQTPDLVQEALDAITIEY 124 (425)
T ss_dssp -------------------------------------SSSCCBCSSCSSCBCSTTCEEEEEEESSHHHHHHHHHHCEEEE
T ss_pred -------------------------------------CCCCccccccCceEEECCCeEEEEEECCHHHHHHHhcCCeEEE
Confidence 1235789999999999999999999999999999999999999
Q ss_pred eeCCCCCCCHHHHhhcCCccchhhhh------ccCCCccccCCCCCchhhHHHHhhcccceEEEEEEEECccccCCCCCC
Q psy7003 900 SDVKTPKLDIKQIVQDGDKARIVEMF------KLEPTATKSKFSPDSNARWEILEAGKKLFKIKGAAEFGPQYHYTMEGQ 973 (1520)
Q Consensus 900 e~l~~~v~di~~Al~~~~~~~i~~~~------~~~~g~~~~~~~~~~~~~~~~~~~a~~~~vveg~~~~~~q~H~~mEp~ 973 (1520)
|++| +++|+++|++++++ .+++.. ..+.|| .+++|++++ ++||++|++++|+|+||||+
T Consensus 125 e~lp-~v~~~~~a~~~~a~-~~~~~~n~~~~~~~~~Gd-----------~~~a~a~A~--~vve~~y~~~~~~H~~mEp~ 189 (425)
T 3hrd_A 125 EELE-GIFTMERALEEDSP-AIHGDTNIHQVKHLEYGD-----------VDAAFKQCD--IVVEDTYSTHRLTHMFIEPD 189 (425)
T ss_dssp EECC-CCCCHHHHHSTTSC-CSSTTCSEEEEEEEEESC-----------HHHHHHTCS--EEEEEEEEECCCCCCCSSCC
T ss_pred EeCC-CCCCHHHHhhcCCc-cccCCCccccccccccCC-----------HHHHhhcCc--eEEEEEEEeCCccccCCCCc
Confidence 9998 69999999998763 233210 112233 346799999 99999999999999999999
Q ss_pred eeEEEEeC-CeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCCCCCCCchHHHHHHHHHHhcCCcEEEEcC
Q psy7003 974 TALCVPSE-DGVDIYAASQWVTLVQESVAGVLGLPNNRVNVKTRRIGGGYGAKLSRSCYPAVIAAVCSNVINKPVRIVMS 1052 (1520)
Q Consensus 974 ~a~A~~~e-d~l~V~~sTQ~p~~vq~~vA~~LGlp~~kVrV~~~~vGGgFG~K~~~~~~~~~~AAlaA~~~gRPVrl~~s 1052 (1520)
+|+|.|++ |+|+||+|||+|+.+|..+|++||||.+||||+++++|||||+|.+... .+.||++|+++||||||+||
T Consensus 190 ~~~A~~~~~g~l~v~~stQ~p~~~r~~vA~~Lglp~~~VrV~~~~vGGgFG~K~~~~~--~~~aa~~A~~~grPVk~~~t 267 (425)
T 3hrd_A 190 AGVSYYDNEGMLTVVVSTQNPHYDRGEVAGMLALPNSKVRIIQATTGGGFGGKLDLSV--QCHCALLTYHTKKPVKMVRS 267 (425)
T ss_dssp EEEEEECTTCCEEEEECCSCHHHHHHHHHHHTTCCGGGEEEEECBCCCCTTTTSSCSS--HHHHHHHHHHHCSCEEEECC
T ss_pred eEEEEECCCCeEEEEECCCCHHHHHHHHHHHhCCChhhEEEEeCCCCCCCCCCcccCH--HHHHHHHHHHhCCCEEEEee
Confidence 99999984 5799999999999999999999999999999999999999999998543 46889999999999999999
Q ss_pred hHHHHhccCCCCcEEEEEeeeccCCCccccccCCCccchhhhhhhhccceeeeccccccccccCcchhhhhccccceeee
Q psy7003 1053 IESMMGALGGRYPVYATYEIGTIGGNLSIKHEHPEFSSDVFLLLEVVGATITIRDTFGLEQTVSPEEYLSIDMNKKVITY 1132 (1520)
Q Consensus 1053 Ree~m~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1132 (1520)
|+|+|..+++||++.+++
T Consensus 268 R~e~~~~~~~R~~~~~~~-------------------------------------------------------------- 285 (425)
T 3hrd_A 268 REESTTVSSKRHPMTMHC-------------------------------------------------------------- 285 (425)
T ss_dssp HHHHHHHSCBCCCEEEEE--------------------------------------------------------------
T ss_pred hHHHhhhcCCCCCeEEEE--------------------------------------------------------------
Confidence 999999999999999888
Q ss_pred eecccccccccccccceeeeCCCCcEEEEEEEEEEecCCCcccchhhhHhhcccCCCCCCCCceEEEEEEEecCCCCCcc
Q psy7003 1133 ITFCPLIKNSYYLRTYKCGVDKNGVIQNLSTVFNVDKGMTLNENGFLHVRFGLGQASIYDPSTFRVVANAVRTDKPTYGF 1212 (1520)
Q Consensus 1133 ~~~~~~~~~~~~~~~~k~g~d~dG~i~al~~~~~~d~Ga~~~~~~~~~~~~~~~~~~~Y~ipn~r~~~~~v~TN~p~~ga 1212 (1520)
|+|+|+||+|++++++++.|+|+|.+.+..+..+...+..++|+|||++++++.|+||+|++||
T Consensus 286 ----------------~~g~d~dG~i~a~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~Y~ipn~~~~~~~v~tn~~~~ga 349 (425)
T 3hrd_A 286 ----------------KTGATKDGRLQAVQVEMFGDTGAYASYGPAVITRATVHCMGPYVVPNVRVDAKFVYTNNPMSGA 349 (425)
T ss_dssp ----------------EEEECTTCCEEEEEEEEEEEEESSCTTHHHHHHHHHHHTTCSBCCSCEEEEEEEEECSSSCBCC
T ss_pred ----------------EEEECCCCcEEEEEEEEEEccccccccchHHHHHHHhhcCCCccCCcEEEEEEEEECCCCCCCc
Confidence 9999999999999999999999998776666555555678999999999999999999999999
Q ss_pred cCCCCchhHHHHHHHHHHHHHHHhCCCHHHHHHHhcCC--------------chHHHHHHHHHhc
Q psy7003 1213 TRSPGACEVTAFIEHVMDHIATVVNRDPTDVRIANLRN--------------EDVKKFYQQFRGS 1263 (1520)
Q Consensus 1213 ~Rg~G~~q~~fa~E~~mD~iA~~lg~DP~e~R~~Nl~~--------------~~~~~~~~~~~~~ 1263 (1520)
|||||.+|++|++|++||++|++|||||+|||++|++. .++.+||+++++.
T Consensus 350 ~Rg~G~~q~~fa~E~~mDelA~~lg~DP~e~R~~N~~~~~~~~~~g~~~~~s~~~~~~l~~~~~~ 414 (425)
T 3hrd_A 350 FRGFGVPQASVCHEGQMNALAKALGMDPIDIRILNAHQVGAKLATGQVLENSVGLIETLEKAREK 414 (425)
T ss_dssp CTTTTHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHBCCTTCBCTTSCBCCSCCCHHHHHHHHHHH
T ss_pred ccCCCchHHHHHHHHHHHHHHHHhCcCHHHHHHHhCCCCCCcCCCCCEECCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999983 1367777776653
No 12
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=100.00 E-value=2.8e-70 Score=660.88 Aligned_cols=318 Identities=23% Similarity=0.348 Sum_probs=271.9
Q ss_pred eEEEEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEE----CCccCCCCcccccccccchhhHH
Q psy7003 20 STVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTV----TSSHPVTGVDSTYSVNACLVLVH 95 (1520)
Q Consensus 20 ~~~~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~----~~~~~~~~~~~~~~v~scl~~~~ 95 (1520)
|.|+|+|||+.+++. +++|+++|+|+|| +++|+|||.||++|.||||||+| ||. +||||++|+.
T Consensus 1 ~~~~~~vNg~~~~~~-~~~~~~~Ll~~Lr-~~~l~g~k~gC~~G~CGaCtV~v~~~~~g~----------~v~sCl~~~~ 68 (462)
T 2w3s_A 1 MEIAFLLNGETRRVR-IEDPTQSLLEWLR-AEGLTGTKEGCNEGDCGACTVMIRDAAGSR----------AVNACLMMLP 68 (462)
T ss_dssp CEEEEEETTEEEEEE-CSCTTCBHHHHHH-HTTCTTSCCSCSSSSSCTTEEEEEETTEEE----------EEETTTCBGG
T ss_pred CcEEEEECCEEEEEe-cCCCCCcHHHHHH-HcCCCccCCCCCCCCcCCcEEEEEecCCCe----------EEEchhhhHH
Confidence 469999999999984 6899999999999 99999999999999999999999 664 9999999999
Q ss_pred hcCCcEEEEecCCCCCCCCCCHHHHHHHHhCCCCCCCCchhHHHHHhhhhccccccccCCcchhhHHhhhhhccCCCcch
Q psy7003 96 MCGGWAITTVEGLGSKKKGYHNVQTRLATMNGSQCGYCSPGMVMAMYSRHRLTASTMCGHNFTKTLLLQMYCIFLPPFSL 175 (1520)
Q Consensus 96 ~~~g~~i~T~eg~~~~~~~~h~vq~~~~~~~~~qcg~ctpg~vm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (1520)
+++|++|+|||||++.++.+||||++|+++|++|||||||||||++|+
T Consensus 69 ~~~g~~i~TiEgl~~~~~~~~~~q~a~~~~~~~QCG~CtpG~im~~~~-------------------------------- 116 (462)
T 2w3s_A 69 QIAGKALRTIEGIAAPDGRLHPVQQAMIDHHGSQCGFCTPGFIVSMAA-------------------------------- 116 (462)
T ss_dssp GGTTCEEECGGGTSCTTSCCCHHHHHHHHTTCCSSCTTHHHHHHHHHH--------------------------------
T ss_pred HhCCCcEEEECCCCCCCCCCCHHHHHHHHhCCCCCCCCcchHHHHHHH--------------------------------
Confidence 999999999999997556899999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHhcCCccCCCCcHHHHHHHHHhhhhcCccccccccccccccccccccccc
Q psy7003 176 EVLFVILLIFVIVSFLEGKKYKVTKSEVEGALGGNICRCTGFRPILDAFQSFSCDASDSVQRKCADIEVRGKRDFISHES 255 (1520)
Q Consensus 176 ~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~gn~crctgy~~i~~a~~~~~~~~~~~~~~~~~d~e~~~~~~~~~~~~ 255 (1520)
|| +||++||+++|+|||||||||++|++|+++++... ....+.++++
T Consensus 117 --------------ll-----~p~~~~i~~~l~gnlCRCtgy~~i~~a~~~~~~~~---~~~~~~~~~~----------- 163 (462)
T 2w3s_A 117 --------------AH-----DRDRKDYDDLLAGNLCRCTGYAPILRAAEAAAGEP---PADWLQADAA----------- 163 (462)
T ss_dssp --------------HH-----HTTCCCHHHHSTTCCCSSSCSHHHHHHHHHHHTSC---CCHHHHHGGG-----------
T ss_pred --------------HH-----CCCHHHHHHHHcCCcccCCCcHHHHHHHHHHhhcc---ccccccCccc-----------
Confidence 66 26889999999999999999999999999998210 0000000000
Q ss_pred ccccccccccccchhhhhhhhhcccccccccccccccCCCcceEEEECCEEEEecccCCCCcchhHHHHhhhcccCcccc
Q psy7003 256 LGTQLLDWAFDTLVFSVLEFRLATLIIVPILLPRLFSDTSSTVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYM 335 (1520)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~f~~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~ 335 (1520)
T Consensus 164 -------------------------------------------------------------------------------- 163 (462)
T 2w3s_A 164 -------------------------------------------------------------------------------- 163 (462)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCccceeeeeccCCCcccccccccccccccccccCccccccCCccchhhhhcccCCCCccccccccccccccccccc
Q psy7003 336 CREGGCGVCTVTVTSSHPVTGVDSTYSVNACGDRCFTRNICRCTGFRPILDAFQSFSCDASDSVQRKCADIEVRGKRDFI 415 (1520)
Q Consensus 336 C~~g~cGactV~v~~~hpvq~~~~~~~~~~Cg~~C~~gNLCRCTgyrpIlda~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (1520)
+ .+
T Consensus 164 -------------------------------------------~--~~-------------------------------- 166 (462)
T 2w3s_A 164 -------------------------------------------F--TL-------------------------------- 166 (462)
T ss_dssp -------------------------------------------C--C---------------------------------
T ss_pred -------------------------------------------c--cc--------------------------------
Confidence 0 00
Q ss_pred ccCCCCCCCCChhhhcccccccccCCCCCCccccccccCCCCccceee--cCCCCCCccccccccccccccccccccccc
Q psy7003 416 SHEGLPEPEYDPTYRKNLAVSLFYKSHINPSIHNRTVMGRGDVRSLFF--GSSTLGEVPTRYKLDLMGSCKLKTKLDQSE 493 (1520)
Q Consensus 416 ~~~~~~~~~~~~~~~~~l~~~~~y~~s~epi~~~~l~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 493 (1520)
..+.+ +|
T Consensus 167 -------------------------------------------~~~~~~~gG---------------------------- 175 (462)
T 2w3s_A 167 -------------------------------------------AQLSSGVRG---------------------------- 175 (462)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -------------------------------------------cceeEcCCC----------------------------
Confidence 00000 00
Q ss_pred CCCCchhhhhhhccccccccCccEEEEcCCHHHHHHHHhcCCCCCCcEEEEecchhhhccCCC--CCCeeeeCCCccccc
Q psy7003 494 DSNDLDTCLIELALTPVNVNVEGIWYIVTEVREIFEIFDGLEANQTYMLVGGNTGYGVYRPRV--PVDVYIQIRDIKELR 571 (1520)
Q Consensus 494 ~~~~~~~~~~~~a~~~~~i~~~~~~~rPtSLeEal~ll~~~p~~~~a~lVAGGTdLgv~~k~~--~~~~lIdIs~I~EL~ 571 (1520)
....|++|+|++|+++++++++ +++++||||+++++++.+ .++.+|||++|+||+
T Consensus 176 --------------------~a~~y~~P~sl~ea~~ll~~~~---~a~ilaGGT~L~~~~k~~~~~~~~lIdl~~i~eL~ 232 (462)
T 2w3s_A 176 --------------------QTAPAFLPETSDALADWYLAHP---EATLIAGGTDVSLWVTKALRDLPEVAFLSHCKDLA 232 (462)
T ss_dssp -----------------------CCBCCSSHHHHHHHHHHCT---TCEEESSCTTTTHHHHTSCCCCCSEEECTTCGGGS
T ss_pred --------------------CccEEEecCCHHHHHHHHhhCC---CCEEEeCCchhhhhhhccCCCCCEEEEcCCChhhC
Confidence 1135999999999999999888 899999999999997654 458999999999999
Q ss_pred ceEEeCCeEEEccccCHHHHHHhhhhccCCchhhhhHHHHHHHHHhhcchhHhccc---ccCCCCCCCCCcc-----CCc
Q psy7003 572 QIFTRNGYVLMGSATTLTEAMDYFDRTSKTDANFEYMRIMKDHLEQVAHYAVRNFA---LGLSTTEVSPSLW-----SGA 643 (1520)
Q Consensus 572 ~I~~~~~~L~IGA~vTlsel~e~L~~~~~~~~~~~~~~~La~al~~IAs~qIRN~A---GNL~~asp~SDL~-----lgA 643 (1520)
.|+.++++|+|||++|++++.+.++ +.+|.|+++++++|++||||+| |||++++|.||+. +||
T Consensus 233 ~I~~~~~~l~IGA~vtl~~l~~~l~---------~~~p~L~~a~~~ia~~qIRN~gTvGGNl~~~sp~sD~~~~L~ALdA 303 (462)
T 2w3s_A 233 QIRETPDGYGIGAGVTIAALRAFAE---------GPHPALAGLLRRFASEQVRQVATIGGNIANGSPIGDGPPALIAMGA 303 (462)
T ss_dssp CEEEETTEEEEETTCBHHHHHHHHT---------TTCHHHHHHHTTSSCHHHHTTCBHHHHHHHTCTTCSHHHHHHHTTC
T ss_pred cEEEcCCEEEEccCCcHHHHHHHHH---------HHhHHHHHHHHHhCChhheeeEEcccccccCCCcchHHHHHHHcCC
Confidence 9999999999999999999998532 3578999999999999999999 9999999999999 999
Q ss_pred EEEEEecCceee--ccccc---------cCce-eeeeeCCCCc
Q psy7003 644 RMIQIERAMSQG--SEDFE---------TKQN-LWPLTKPLPK 674 (1520)
Q Consensus 644 ~V~I~s~~g~R~--l~dFf---------~~EI-tsI~IP~~~~ 674 (1520)
+|++.+.+|.|+ ++||| ++|| ++|.||....
T Consensus 304 ~v~l~~~~G~R~vp~~dF~~g~~~t~L~~~Eii~~i~iP~~~~ 346 (462)
T 2w3s_A 304 SLTLRRGQERRRMPLEDFFLEYRKQDRRPGEFVESVTLPKSAP 346 (462)
T ss_dssp EEEEEBTTBCCCCBGGGGEEETTEESCCTTCEEEEEEEESCCS
T ss_pred EEEEEeCCceEEEEHHHhhcccccccCCCCcEEEEEEEecCCC
Confidence 999999999877 89999 5899 9999997653
No 13
>3nvw_A Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, guanine, oxidoredu; HET: FAD MTE GUN; 1.60A {Bos taurus} PDB: 3etr_A* 3ns1_A* 3nvv_A* 3nrz_A* 3nvy_A* 3nvz_A* 3rca_A* 3sr6_A* 3eub_A*
Probab=100.00 E-value=3.9e-55 Score=458.36 Aligned_cols=161 Identities=43% Similarity=0.814 Sum_probs=153.0
Q ss_pred eEEEEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEECCccCCCCcccccccccchhhHHhcCC
Q psy7003 20 STVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTSSHPVTGVDSTYSVNACLVLVHMCGG 99 (1520)
Q Consensus 20 ~~~~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~~~~~~~~~~~~~~~v~scl~~~~~~~g 99 (1520)
+.|+|+|||+++... +++|+++|+||||+++||+|||+||++|.||||||+||++|+.+++++.++||||++|+.+++|
T Consensus 3 ~~i~~~vNG~~~~~~-~~~p~~~Ll~~LR~~lgltGtK~GC~~G~CGACTVlvd~~~~~~~~~~g~~v~SCl~~a~~~~G 81 (164)
T 3nvw_A 3 DELVFFVNGKKVVEK-NADPETTLLAYLRRKLGLRGTKLGCGEGGCGACTVMLSKYDRLQDKIIHFSANACLAPICTLHH 81 (164)
T ss_dssp CCEEEEETTEEEEET-TCCTTCBHHHHHHHTSCCTTSCCSCSSSSSCTTEEEEEEEETTTTEEEEEEEETTTCBGGGCTT
T ss_pred ceEEEEECCEEEEEe-cCCCCCCHHHHHHHHcCCCCcCCCcCCCCCCCCEEEEccccccccccCCcEEehhhhhHHHhCC
Confidence 459999999997432 8999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEecCCCCCCCCCCHHHHHHHHhCCCCCCCCchhHHHHHhhhhccccccccCCcchhhHHhhhhhccCCCcchhHHH
Q psy7003 100 WAITTVEGLGSKKKGYHNVQTRLATMNGSQCGYCSPGMVMAMYSRHRLTASTMCGHNFTKTLLLQMYCIFLPPFSLEVLF 179 (1520)
Q Consensus 100 ~~i~T~eg~~~~~~~~h~vq~~~~~~~~~qcg~ctpg~vm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (1520)
++|+|||||+++++.+||||+||+++|++|||||||||||++|+
T Consensus 82 ~~I~TiEGL~~~~~~lhpvQ~af~~~~~~QCGfCtPG~imsa~a------------------------------------ 125 (164)
T 3nvw_A 82 VAVTTVEGIGSTKTRLHPVQERIAKSHGSQCGFCTPGIVMSMYT------------------------------------ 125 (164)
T ss_dssp CEEECGGGTCCTTSCCCHHHHHHHHTTCCSSCTTHHHHHHHHHH------------------------------------
T ss_pred cceEEecccCCCCCccCHHHHHHHHcCCCcCccchhhHHHHHHH------------------------------------
Confidence 99999999997666799999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCHHHHHHHhcCCccCCCCcHHHHHHHHHhh
Q psy7003 180 VILLIFVIVSFLEGKKYKVTKSEVEGALGGNICRCTGFRPILDAFQSFS 228 (1520)
Q Consensus 180 ~~~~~~~~~~~l~~~~~~~~~~~i~~~~~gn~crctgy~~i~~a~~~~~ 228 (1520)
||++++ .||++||+++|+|||||||||++|++|+++|+
T Consensus 126 ----------Ll~~~p-~pt~~eI~~al~GNlCRCTgY~~I~~Av~~~~ 163 (164)
T 3nvw_A 126 ----------LLRNQP-EPTVEEIEDAFQGNLCRCTGYRPILQGFRTFA 163 (164)
T ss_dssp ----------HHHHCS-SCCHHHHHTSCTTCCCSSSCSHHHHHHHHTTC
T ss_pred ----------HHHhCC-CCCHHHHHHHHcCCCCCCCCCHHHHHHHHHHh
Confidence 888888 89999999999999999999999999999987
No 14
>3hrd_D Nicotinate dehydrogenase small FES subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=100.00 E-value=2.2e-50 Score=422.57 Aligned_cols=152 Identities=32% Similarity=0.586 Sum_probs=145.1
Q ss_pred ceEEEEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEECCccCCCCcccccccccchhhHHhcC
Q psy7003 19 SSTVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTSSHPVTGVDSTYSVNACLVLVHMCG 98 (1520)
Q Consensus 19 ~~~~~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~~~~~~~~~~~~~~~v~scl~~~~~~~ 98 (1520)
.|.|+|+|||+.+++ +++|+++|+|+||++++|+|+|+||++|.||+|||+|||. +|+||++|+.+++
T Consensus 3 ~~~i~~~vNG~~~~v--~v~p~~tLLd~LR~~lgltgtk~gC~~G~CGACtV~vdG~----------~v~sC~~~~~~~~ 70 (160)
T 3hrd_D 3 KITINLNLNGEARSI--VTEPNKRLLDLLREDFGLTSVKEGCSEGECGACTVIFNGD----------PVTTCCMLAGQAD 70 (160)
T ss_dssp CEEEEEEETTEEEEE--EECSSSBHHHHHHTTSCCTTSCCSSSSSSSCTTEEEETTE----------EEEGGGSBGGGGT
T ss_pred cceEEEEECCEEEEE--ecCCCCCHHHHHHHhcCCCccccccCCCCCCCCEEEECCE----------EEEchhhhhhhhC
Confidence 478999999999998 7999999999999999999999999999999999999996 9999999999999
Q ss_pred CcEEEEecCCCCCCCCCCHHHHHHHHhCCCCCCCCchhHHHHHhhhhccccccccCCcchhhHHhhhhhccCCCcchhHH
Q psy7003 99 GWAITTVEGLGSKKKGYHNVQTRLATMNGSQCGYCSPGMVMAMYSRHRLTASTMCGHNFTKTLLLQMYCIFLPPFSLEVL 178 (1520)
Q Consensus 99 g~~i~T~eg~~~~~~~~h~vq~~~~~~~~~qcg~ctpg~vm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (1520)
|++|+|||||++ .+.+||||++|+++|++|||||||||||++|+
T Consensus 71 G~~I~TiEgl~~-~~~l~pvq~af~~~~~~QCGfCtpG~ims~~a----------------------------------- 114 (160)
T 3hrd_D 71 ESTIITLEGVAE-DGKPSLLQQCFLEAGAVQCGYCTPGMILTAKA----------------------------------- 114 (160)
T ss_dssp TEEEECGGGTSB-TTBCCHHHHHHHHHTCCSSCSSHHHHHHHHHH-----------------------------------
T ss_pred CCceEEeCCCCC-CCccCHHHHHHHHcCCCcCCcchhhHHHHHHH-----------------------------------
Confidence 999999999995 45799999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCHHHHHHHhcCCccCCCCcHHHHHHHHHhhhh
Q psy7003 179 FVILLIFVIVSFLEGKKYKVTKSEVEGALGGNICRCTGFRPILDAFQSFSCD 230 (1520)
Q Consensus 179 ~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~gn~crctgy~~i~~a~~~~~~~ 230 (1520)
||++++ .||++||+++|+|||||||||++|++|+++++..
T Consensus 115 -----------ll~~~~-~pt~~eI~~al~GNlCRCtgY~~I~~Av~~aa~~ 154 (160)
T 3hrd_D 115 -----------LLDKNP-DPTDEEITVAMSGNLCRCTGYIKIHAAVRYAVER 154 (160)
T ss_dssp -----------HHTTCS-SCCHHHHHHHHTTCCCSSSCSHHHHHHHHHHHHH
T ss_pred -----------HHHhCC-CCCHHHHHHHHcCCCCCCCCcHHHHHHHHHHHHH
Confidence 898888 8999999999999999999999999999999854
No 15
>1n62_A Carbon monoxide dehydrogenase small chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: a.56.1.1 d.15.4.2 PDB: 1n5w_A* 1n61_A* 1n60_A* 1n63_A* 1zxi_A*
Probab=100.00 E-value=6.2e-48 Score=407.18 Aligned_cols=153 Identities=35% Similarity=0.682 Sum_probs=145.5
Q ss_pred ceEEEEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEECCccCCCCcccccccccchhhHHhcC
Q psy7003 19 SSTVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTSSHPVTGVDSTYSVNACLVLVHMCG 98 (1520)
Q Consensus 19 ~~~~~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~~~~~~~~~~~~~~~v~scl~~~~~~~ 98 (1520)
.|.|+|+|||+.+++ +++|+++|||+||+.++|+|+|+||++|.||+|||+|||. +|+||++|+.+++
T Consensus 3 ~~~i~~~vNG~~~~~--~v~~~~tLLd~LR~~lgl~g~k~gC~~G~CGaCtV~vdG~----------~v~SC~~~~~~~~ 70 (166)
T 1n62_A 3 KAHIELTINGHPVEA--LVEPRTLLIHFIREQQNLTGAHIGCDTSHCGACTVDLDGM----------SVKSCTMFAVQAN 70 (166)
T ss_dssp CEEEEEEETTEEEEE--EECTTCBHHHHHHHTSCCTTSCCCCSSSCSCTTEEEETTE----------EEEGGGSBGGGGT
T ss_pred CceEEEEECCEEEEE--ecCCCCcHHHHHHHcCCCCccccCCCCCCCCCCEEEECCc----------EEechhhhHHHhC
Confidence 467999999999998 7999999999999999999999999999999999999996 9999999999999
Q ss_pred CcEEEEecCCCCCCCCCCHHHHHHHHhCCCCCCCCchhHHHHHhhhhccccccccCCcchhhHHhhhhhccCCCcchhHH
Q psy7003 99 GWAITTVEGLGSKKKGYHNVQTRLATMNGSQCGYCSPGMVMAMYSRHRLTASTMCGHNFTKTLLLQMYCIFLPPFSLEVL 178 (1520)
Q Consensus 99 g~~i~T~eg~~~~~~~~h~vq~~~~~~~~~qcg~ctpg~vm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (1520)
|++|+|||||++.++.+||+|++|+++|++|||||||||||++|+
T Consensus 71 G~~V~TiEgL~~~~~~~~pvq~a~~~~~~~QCG~CtpG~imsa~a----------------------------------- 115 (166)
T 1n62_A 71 GASITTIEGMAAPDGTLSALQEGFRMMHGLQCGYCTPGMIMRSHR----------------------------------- 115 (166)
T ss_dssp TCEEECGGGSSCTTSCCCHHHHHHHHTTCCSSCSSHHHHHHHHHH-----------------------------------
T ss_pred CceEEEeCCCCCcCCccCHHHHHHHHcCCccCCccchhHHHHHHH-----------------------------------
Confidence 999999999996456799999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCHHHHHHHhcCCccCCCCcHHHHHHHHHhhhh
Q psy7003 179 FVILLIFVIVSFLEGKKYKVTKSEVEGALGGNICRCTGFRPILDAFQSFSCD 230 (1520)
Q Consensus 179 ~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~gn~crctgy~~i~~a~~~~~~~ 230 (1520)
||++++ .||++||+++|+|||||||||++|++|+++++..
T Consensus 116 -----------ll~~~~-~pt~~eI~~~l~gNlCRCtgY~~I~~Av~~~a~~ 155 (166)
T 1n62_A 116 -----------LLQENP-SPTEAEIRFGIGGNLCRCTGYQNIVKAIQYAAAK 155 (166)
T ss_dssp -----------HHHHCS-SCCHHHHHHHTTTCCCSSSTTHHHHHHHHHHHHH
T ss_pred -----------HHHcCC-CCCHHHHHHHHcCCccCCCCCHHHHHHHHHHHHH
Confidence 888888 8999999999999999999999999999999853
No 16
>1ffv_A CUTS, iron-sulfur protein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: a.56.1.1 d.15.4.2 PDB: 1ffu_A*
Probab=100.00 E-value=8.5e-48 Score=405.02 Aligned_cols=152 Identities=36% Similarity=0.699 Sum_probs=144.8
Q ss_pred ceEEEEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEECCccCCCCcccccccccchhhHHhcC
Q psy7003 19 SSTVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTSSHPVTGVDSTYSVNACLVLVHMCG 98 (1520)
Q Consensus 19 ~~~~~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~~~~~~~~~~~~~~~v~scl~~~~~~~ 98 (1520)
.+.|+|+|||+.+++ +++|+++|||+||+.++|+|+|+||++|.||+|||+|||. +|+||++|+.+++
T Consensus 3 ~~~i~~~vNG~~~~~--~v~~~~tLLd~LR~~lgltg~k~gC~~G~CGaCtV~vdG~----------~v~sC~~~~~~~~ 70 (163)
T 1ffv_A 3 KKIITVNVNGKAQEK--AVEPRTLLIHFLREELNLTGAHIGCETSHCGACTVDIDGR----------SVKSCTHLAVQCD 70 (163)
T ss_dssp CEEEEEEETTEEEEE--EECTTCBHHHHHHHTSCCTTSCCCCSSSCSCTTEEEETTE----------EEEGGGSBGGGGT
T ss_pred CceEEEEECCEEEEE--ecCCCCcHHHHHHhcCCCcccccCCCCCCCCCCEEEECCc----------EecchHhhHHHhC
Confidence 357999999999998 7999999999999999999999999999999999999996 9999999999999
Q ss_pred CcEEEEecCCCCCCCCCCHHHHHHHHhCCCCCCCCchhHHHHHhhhhccccccccCCcchhhHHhhhhhccCCCcchhHH
Q psy7003 99 GWAITTVEGLGSKKKGYHNVQTRLATMNGSQCGYCSPGMVMAMYSRHRLTASTMCGHNFTKTLLLQMYCIFLPPFSLEVL 178 (1520)
Q Consensus 99 g~~i~T~eg~~~~~~~~h~vq~~~~~~~~~qcg~ctpg~vm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (1520)
|++|+|||||++ .+.+||+|++|+++|++|||||||||||++|+
T Consensus 71 G~~I~TiEgL~~-~~~l~pvq~a~~~~~~~QCG~CtpG~imsa~a----------------------------------- 114 (163)
T 1ffv_A 71 GSEVLTVEGLAN-KGVLHAVQEGFYKEHGLQCGFCTPGMLMRAYR----------------------------------- 114 (163)
T ss_dssp TCEEECGGGTSB-TTBCCHHHHHHHHTTCCSSCSSHHHHHHHHHH-----------------------------------
T ss_pred CceEEEECCCCC-CCCcCHHHHHHHHhCCccCccccHhHHHHHHH-----------------------------------
Confidence 999999999986 45799999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCHHHHHHHhcCCccCCCCcHHHHHHHHHhhhh
Q psy7003 179 FVILLIFVIVSFLEGKKYKVTKSEVEGALGGNICRCTGFRPILDAFQSFSCD 230 (1520)
Q Consensus 179 ~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~gn~crctgy~~i~~a~~~~~~~ 230 (1520)
||++++ .||++||+++|+|||||||||++|++|+++++..
T Consensus 115 -----------ll~~~~-~pt~~ei~~~l~gnlCRCtgY~~I~~Av~~~a~~ 154 (163)
T 1ffv_A 115 -----------FLQENP-NPTEAEIRMGMTGNLCRCTGYQNIVKAVQYAARK 154 (163)
T ss_dssp -----------HHHHCS-SCCHHHHHHHTTTCCCSSSCSHHHHHHHHHHHHH
T ss_pred -----------HHHcCC-CCCHHHHHHHHcCCccCCCCCHHHHHHHHHHHHH
Confidence 888888 8999999999999999999999999999999854
No 17
>3hrd_B Nicotinate dehydrogenase medium molybdopterin subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=100.00 E-value=8.3e-44 Score=414.53 Aligned_cols=221 Identities=24% Similarity=0.305 Sum_probs=200.8
Q ss_pred cccccceEEEEeccCC---CCcceEEEEEEcCCCeEEEEecCcccCcchHHHHHHHHHHHhCCCCCcEEEecCCCCCCCC
Q psy7003 1298 RKRGISAVVTLFPLGF---YDVSYAILSVFRRDATVAITTSGIEIGQGLHTKVAQACAYELGIPIEKIVLKPAQNNIFPN 1374 (1520)
Q Consensus 1298 ~krGig~~~~~~~~g~---~~~~~a~v~v~~~DGsV~i~~g~~e~GQG~~T~~aQiaA~~Lgip~e~I~v~~~dT~~~p~ 1374 (1520)
|+||||+++..++.|. .+++.+.|+| ++||+|+|.+|..|||||++|+++||+||+||||+|+|+|..+||+.+|+
T Consensus 2 k~rGiGia~~~~~~g~~~~~~~~~a~v~i-~~DG~V~v~~g~~emGQG~~T~laQIaAe~Lgi~~e~V~v~~~DT~~~p~ 80 (330)
T 3hrd_B 2 KKRGKGVGSMWYGIGNTGLPNPAAAFVEI-HGDGSANVMFGAADIGQGSGTAMAQIAAEELGLDYEKIHVTWGDTMVTPD 80 (330)
T ss_dssp EEEEEEEEEEEEECSSTTSCCCEEEEEEE-CTTSCEEEEECCCCSSSCHHHHHHHHHHHHHTCCGGGEEEEESBTTTSCC
T ss_pred cEEEEEEEEEEEecCCCCCCCcceEEEEE-eCCCeEEEEECCCCCCCCHHHHHHHHHHHHhCCCHHHEEEEecCCCCCCC
Confidence 5789999999998873 3468899996 78999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccccchHHHHHHHHHHHHHHhhhhhhc------------------------CCCHHHHHHHHhhcCceeEEEE
Q psy7003 1375 AANTGGSTASDNAARCILLCCQELKTRLMPYMDK------------------------GKSWEKTISDAFERGVDLQVTK 1430 (1520)
Q Consensus 1375 ~~~t~gS~~t~~~g~Av~~Ac~~l~~rl~~~~~~------------------------~~~w~~~~~~a~~~gv~l~~~~ 1430 (1520)
+.+|+|||++.+.|.|+++||++||+||++.+++ ..+|.+++..++..++.+.+.+
T Consensus 81 ~~~T~gSrst~~~g~Av~~Aa~~lr~~L~~~AA~~~~~~~~~l~~~~G~v~~~~~~~~~~s~~ela~~a~~~~~~l~~~g 160 (330)
T 3hrd_B 81 GGATSASRQTLITGNAVILACRQAKETLAKTAAEKLDCAPEELSFRDNTVFITADPERSMTYGELMAAMKAAGRMAVGAG 160 (330)
T ss_dssp CCCSCTTCHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCSSSCCCSSSBCCCCSSCSCSCCBHHHHHHHHHHTTCCEEEEE
T ss_pred CCCCcchHhHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHEEEeCCEEEECCCCCCcccHHHHHHHHhhcCCceeEEE
Confidence 9999999999999999999999999999887532 4689999999998899999998
Q ss_pred EeeccC-------CCCCCCccccceEEEEEEEEECCCCcEEEEEEEEEEecCcccChHHHhHHhHhHHHHHHHHHHccce
Q psy7003 1431 SVSSQQ-------TPDLLPMYTIPTAAATEVEVDLLTGQHQILRVDILEDTGQSINPAIDIGQIQGAFIMGIGLWTFEHQ 1503 (1520)
Q Consensus 1431 ~~~~~~-------~~~~~~~~~~~ga~~aEVEVD~~TG~v~V~r~~~~~D~G~~INP~~~~GQIeGg~vqGiG~aL~Ee~ 1503 (1520)
+|.... ..+.++.+++|||+++|||||++||+++|+|+++++|||++|||.+++||||||++||||++|+|++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~ga~~~eVeVd~~tG~v~v~~~~~~~D~G~~iNp~~~~gQi~Gg~~~Glg~al~E~~ 240 (330)
T 3hrd_B 161 SYNPNTTGLAPENMSGIPFEVYSYATTIAEVEVDTETGEVDVLKVVSAHDVGTPINRSMVEGQIEGGVTMGQGFVLMEEI 240 (330)
T ss_dssp EECCCCCCCCTTTCCSCCCSCEEEEEEEEEEEEETTTCCEEEEEEEEEEEEESCSBHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred EecCCCCccccccccCCCCCCCceeEEEEEEEEECCCCcEEEEEEEEEEECCccCCHHHHHHHHHHHHHHHHHHHhcCce
Confidence 885321 1223456789999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeCCCceeecCCCCC
Q psy7003 1504 IHDKRTGALLTNRTWV 1519 (1520)
Q Consensus 1504 ~~d~~~G~llt~~~w~ 1519 (1520)
.||+++|+++|+|.|+
T Consensus 241 ~~d~~~G~~~~~~~~~ 256 (330)
T 3hrd_B 241 EVNTKNGAIKNPSMSK 256 (330)
T ss_dssp CBCTTTCCBSCCSTTT
T ss_pred EEeCCCCeECCCCHHH
Confidence 9986689999998774
No 18
>1rm6_C 4-hydroxybenzoyl-COA reductase gamma subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: a.56.1.1 d.15.4.2 PDB: 1sb3_C*
Probab=100.00 E-value=3.4e-43 Score=370.35 Aligned_cols=151 Identities=35% Similarity=0.677 Sum_probs=143.3
Q ss_pred eEEEEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEECCccCCCCcccccccccchhhHHhcCC
Q psy7003 20 STVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTSSHPVTGVDSTYSVNACLVLVHMCGG 99 (1520)
Q Consensus 20 ~~~~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~~~~~~~~~~~~~~~v~scl~~~~~~~g 99 (1520)
+.|+|+|||+.+++ +++|++||||+||+.++++|+|.||++|.||+|||+|||. +++||++|+..++|
T Consensus 3 ~~i~~~vNG~~~~v--~~~~~~tLL~~Lr~~~gl~g~k~gC~~G~CGaCtV~vdG~----------~v~sC~~~~~~~~G 70 (161)
T 1rm6_C 3 NILRLTLNGRARED--LVPDNMLLLDYLRETVGLTGTKQGCDGGECGACTVLVDDR----------PRLACSTLAHQVAG 70 (161)
T ss_dssp EEEEEEETTEEEEE--EEETTCBHHHHHHHTTCCTTSCCCSSSSSSCTTEEEETTE----------EEEGGGSBGGGGTT
T ss_pred ceEEEEECCEEEEE--ecCCcCcHHHHHHHcCCCcccccCCCCCCCCCCEEEECCc----------EEechHHHHHHhCC
Confidence 46999999999998 7899999999999999999999999999999999999996 89999999999999
Q ss_pred cEEEEecCCCCCCCCCCHHHHHHHHhCCCCCCCCchhHHHHHhhhhccccccccCCcchhhHHhhhhhccCCCcchhHHH
Q psy7003 100 WAITTVEGLGSKKKGYHNVQTRLATMNGSQCGYCSPGMVMAMYSRHRLTASTMCGHNFTKTLLLQMYCIFLPPFSLEVLF 179 (1520)
Q Consensus 100 ~~i~T~eg~~~~~~~~h~vq~~~~~~~~~qcg~ctpg~vm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (1520)
++|+|||||++ .+.+||+|++|+++++.|||||||||||++|+
T Consensus 71 ~~v~TiEgL~~-~~~~~p~q~a~~~~~~~qCG~Ctpg~im~a~~------------------------------------ 113 (161)
T 1rm6_C 71 KKVETVESLAT-QGTLSKLQAAFHEKLGTQCGFCTPGMIMASEA------------------------------------ 113 (161)
T ss_dssp SEEECGGGSSB-TTBCCHHHHHHHHHTCCSSCSSHHHHHHHHHH------------------------------------
T ss_pred ceEEEECCCCC-CCccCHHHHHHHHhCCCcCCCCchHHHHHHHH------------------------------------
Confidence 99999999996 45799999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCHHHHHHHhcCCccCCCCcHHHHHHHHHhhhh
Q psy7003 180 VILLIFVIVSFLEGKKYKVTKSEVEGALGGNICRCTGFRPILDAFQSFSCD 230 (1520)
Q Consensus 180 ~~~~~~~~~~~l~~~~~~~~~~~i~~~~~gn~crctgy~~i~~a~~~~~~~ 230 (1520)
||+.++ .||++||+++|+||+||||||++|++|+++++..
T Consensus 114 ----------ll~~~~-~pt~~~i~~~l~gnlcRCtgy~~i~~A~~~~~~~ 153 (161)
T 1rm6_C 114 ----------LLRKNP-SPSRDEIKAALAGNLCRCTGYVKIIKSVETAAAA 153 (161)
T ss_dssp ----------HHHHCS-SCCHHHHHHHTTTCCCSSSCSHHHHHHHHHHHHH
T ss_pred ----------HHhcCC-CCCHHHHHHHHcCCeECCCCCHHHHHHHHHHHHH
Confidence 788887 6999999999999999999999999999999853
No 19
>1t3q_A Quinoline 2-oxidoreductase small subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: a.56.1.1 d.15.4.2
Probab=100.00 E-value=3.2e-39 Score=342.79 Aligned_cols=153 Identities=33% Similarity=0.636 Sum_probs=143.5
Q ss_pred CceEEEEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEECCccCCCCcccccccccchhhHHhc
Q psy7003 18 TSSTVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTSSHPVTGVDSTYSVNACLVLVHMC 97 (1520)
Q Consensus 18 ~~~~~~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~~~~~~~~~~~~~~~v~scl~~~~~~ 97 (1520)
..|.++|+|||+.+++ +++|++||||+||+.+|++|+|+||++|.||+|+|+|||. +++||++++..+
T Consensus 8 ~~m~i~~~ing~~~~~--~v~~~~tlL~~Lr~~~gl~g~~~~C~~G~CGaC~V~vdG~----------~v~sC~~~~~~~ 75 (168)
T 1t3q_A 8 QLMRISATINGKPRVF--YVEPRMHLADALREVVGLTGTKIGCEQGVCGSCTILIDGA----------PMRSCLTLAVQA 75 (168)
T ss_dssp CCEEEEEEETTEEEEE--EECTTSBHHHHHHHTTCCTTSCCSCSSSSSCTTEEEETTE----------EEEGGGSBGGGG
T ss_pred CcceEEEEECCEEEEE--ecCCCCcHHHHHHhcCCCCccccCCCCCCCCCcEEEECCC----------EeechhhHHHHh
Confidence 4578999999999998 7999999999999989999999999999999999999995 899999999999
Q ss_pred CCcEEEEecCCCCCCCCCCHHHHHHHHhCCCCCCCCchhHHHHHhhhhccccccccCCcchhhHHhhhhhccCCCcchhH
Q psy7003 98 GGWAITTVEGLGSKKKGYHNVQTRLATMNGSQCGYCSPGMVMAMYSRHRLTASTMCGHNFTKTLLLQMYCIFLPPFSLEV 177 (1520)
Q Consensus 98 ~g~~i~T~eg~~~~~~~~h~vq~~~~~~~~~qcg~ctpg~vm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (1520)
+|+.|+|+|||++ ...+||+|++|.++|+.|||||+|||+|++|+
T Consensus 76 ~G~~v~Tiegl~~-~~~~~~~q~a~~~~~~~qCG~C~pg~i~~a~~---------------------------------- 120 (168)
T 1t3q_A 76 EGCSIETVEGLSQ-GEKLNALQDSFRRHHALQCGFCTAGMLATARS---------------------------------- 120 (168)
T ss_dssp TTCEEECGGGTCC-SSSCCHHHHHHHHTTCCSSCSSHHHHHHHHHH----------------------------------
T ss_pred CCCeEEEEcCCCC-ccccCHHHHHHHHhCCCcCCCchHHHHHHHHH----------------------------------
Confidence 9999999999986 45789999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCHHHHHHHhcCCccCCCCcHHHHHHHHHhhhh
Q psy7003 178 LFVILLIFVIVSFLEGKKYKVTKSEVEGALGGNICRCTGFRPILDAFQSFSCD 230 (1520)
Q Consensus 178 ~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~gn~crctgy~~i~~a~~~~~~~ 230 (1520)
||+.++ .++++||+++|+||+||||+|++|++|+++++..
T Consensus 121 ------------ll~~~~-~p~~~~i~~~l~gnlcRCt~y~~~v~A~~~~~~~ 160 (168)
T 1t3q_A 121 ------------ILAENP-APSRDEVREVMSGNLCRCTGYETIIDAITDPAVA 160 (168)
T ss_dssp ------------HHHHCS-SCCHHHHHHHGGGSCCSSSCSHHHHHHHTCHHHH
T ss_pred ------------HHhcCC-CCCHHHHHHHHcCCcccCCCchHHHHHHHHHHHH
Confidence 776676 6899999999999999999999999999988753
No 20
>3nvz_B Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3eub_B* 3etr_B* 3ns1_B* 3nrz_B* 3rca_B* 3sr6_B* 3nvw_B* 3nvv_B* 3nvy_B*
Probab=99.95 E-value=6.7e-29 Score=286.73 Aligned_cols=158 Identities=18% Similarity=0.143 Sum_probs=139.4
Q ss_pred CccEEEEcCCHHHHHHHHhcCCCCCCcEEEEecchhhhccCC--CCCCeeeeCCCcccccceEEeCCeEEEccccCHHHH
Q psy7003 514 VEGIWYIVTEVREIFEIFDGLEANQTYMLVGGNTGYGVYRPR--VPVDVYIQIRDIKELRQIFTRNGYVLMGSATTLTEA 591 (1520)
Q Consensus 514 ~~~~~~rPtSLeEal~ll~~~p~~~~a~lVAGGTdLgv~~k~--~~~~~lIdIs~I~EL~~I~~~~~~L~IGA~vTlsel 591 (1520)
....||+|+|++|+++++++++ +++++||||+++++++. ..++.+|||++|+||+.|+.++++|+|||++|++++
T Consensus 9 ~~~~y~~P~sl~ea~~ll~~~~---~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vt~~~l 85 (305)
T 3nvz_B 9 ERVTWIQASTLKELLDLKAQHP---EAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHGPEGISFGAACALSSV 85 (305)
T ss_dssp SSCEEEECCSHHHHHHHHHHCT---TCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEECSSEEEEETTCBHHHH
T ss_pred CCeEEEccCCHHHHHHHHHhCC---CCEEEECccHHHHHHhcCCCCCCEEEECCCChhhcceEECCCeEEEccCCcHHHH
Confidence 3568999999999999999988 89999999999999764 345889999999999999999999999999999999
Q ss_pred HHhhhhccC--CchhhhhHHHHHHHHHhhcchhHhccc---ccCCCCCCCCCcc-----CCcEEEEEecCceee--cc-c
Q psy7003 592 MDYFDRTSK--TDANFEYMRIMKDHLEQVAHYAVRNFA---LGLSTTEVSPSLW-----SGARMIQIERAMSQG--SE-D 658 (1520)
Q Consensus 592 ~e~L~~~~~--~~~~~~~~~~La~al~~IAs~qIRN~A---GNL~~asp~SDL~-----lgA~V~I~s~~g~R~--l~-d 658 (1520)
++.+.+.++ .....+++|.|+++++++|++||||+| ||||+++|+||++ +||+|++.+.+|.|+ ++ |
T Consensus 86 ~~~~~~~~~~~p~~~~~~~p~L~~a~~~ia~~qiRN~aTiGGNl~~a~p~sD~~~~L~AldA~v~l~~~~G~R~vp~~~d 165 (305)
T 3nvz_B 86 EKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITASPISDLNPVFMASGTKLTIVSRGTRRTVPMDHT 165 (305)
T ss_dssp HHHHHHHHHHSCGGGCHHHHHHHHHHTTSSCHHHHTTCBHHHHHHHCCTTCSSHHHHHHHTCEEEEEETTEEEEEECCGG
T ss_pred HHHHHhhhcccchhhhhhhHHHHHHHHHhCCHHHhCeeechheeCCCCCchHHHHHHHHcCCEEEEEcCCCcEEEEeehH
Confidence 986653211 112456899999999999999999999 9999999999999 999999999999888 77 8
Q ss_pred cc---------cCce-eeeeeCCCCc
Q psy7003 659 FE---------TKQN-LWPLTKPLPK 674 (1520)
Q Consensus 659 Ff---------~~EI-tsI~IP~~~~ 674 (1520)
|| ++|| ++|.||.+..
T Consensus 166 f~~g~~~t~l~~~Eil~~I~iP~~~~ 191 (305)
T 3nvz_B 166 FFPSYRKTLLGPEEILLSIEIPYSRE 191 (305)
T ss_dssp GCCSTTCCSCCTTCEEEEEEEECCCT
T ss_pred hhcCcccccCCCCcEEEEEEecCCCC
Confidence 99 6899 9999998754
No 21
>3hrd_C Nicotinate dehydrogenase FAD-subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=99.95 E-value=1.2e-28 Score=283.40 Aligned_cols=149 Identities=17% Similarity=0.149 Sum_probs=136.8
Q ss_pred cEEEEcCCHHHHHHHHhcCCCCC-CcEEEEecchhhhccCCC--CCCeeeeCCCcccccceEEeCCeEEEccccCHHHHH
Q psy7003 516 GIWYIVTEVREIFEIFDGLEANQ-TYMLVGGNTGYGVYRPRV--PVDVYIQIRDIKELRQIFTRNGYVLMGSATTLTEAM 592 (1520)
Q Consensus 516 ~~~~rPtSLeEal~ll~~~p~~~-~a~lVAGGTdLgv~~k~~--~~~~lIdIs~I~EL~~I~~~~~~L~IGA~vTlsel~ 592 (1520)
-+||+|+|++||++++++++ + +++++||||+|+++++.+ .++.+|||++|+||+.|+.++++|+|||++|++++.
T Consensus 4 f~y~~P~sl~ea~~ll~~~~--~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vt~~~l~ 81 (296)
T 3hrd_C 4 FEFFAPKTLEEAKGLLHQYK--DVPPAIIAGGTDLVIEINDRWEKPDVVIDIKKLKELEYIRVEENTIHIGALSTFTQIE 81 (296)
T ss_dssp CEEECCSSHHHHHHHHHHTT--TSCCEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEECSSEEEEETTCBHHHHH
T ss_pred eeEeCCCCHHHHHHHHHhCC--CCCeEEEECCcHHHHHhhcCCCCCCeEEEcccChhhcceEEcCCeEEEccCCcHHHHH
Confidence 47999999999999999987 2 499999999999987654 458999999999999999999999999999999999
Q ss_pred HhhhhccCCchhhhhHHHHHHHHHhhcchhHhccc---ccCCCCCCCCCcc-----CCcEEEEEecCceee--ccccc--
Q psy7003 593 DYFDRTSKTDANFEYMRIMKDHLEQVAHYAVRNFA---LGLSTTEVSPSLW-----SGARMIQIERAMSQG--SEDFE-- 660 (1520)
Q Consensus 593 e~L~~~~~~~~~~~~~~~La~al~~IAs~qIRN~A---GNL~~asp~SDL~-----lgA~V~I~s~~g~R~--l~dFf-- 660 (1520)
+ ++.+.+++|.|.+++++||++||||+| ||||+++|+||++ +||+|++.+.+|.|+ ++|||
T Consensus 82 ~-------~~~~~~~~p~L~~a~~~ias~qIRN~aTiGGNi~~a~p~sD~~~~LlAldA~v~l~~~~g~R~vp~~dF~~g 154 (296)
T 3hrd_C 82 N-------HPFIRSHVRALYKAASQVGSPQIRNLGTIGGNLSTSSVAGDGVSAMTTLDATVVLESVRGTRQMKLTDFFDG 154 (296)
T ss_dssp H-------CHHHHHHCHHHHHHHHTSSCHHHHHHCBHHHHHHHTCTTCHHHHHHHHTTCEEEEEETTEEEEEEHHHHHHC
T ss_pred h-------ChhhhhHhHHHHHHHHHhCCHHHhcceehhhhhccCCCchHHHHHHHHhCcEEEEEcCCceEEEEHHHHhcc
Confidence 8 566678899999999999999999999 9999999999998 999999999999888 89998
Q ss_pred ----------cCce-eeeeeCCCC
Q psy7003 661 ----------TKQN-LWPLTKPLP 673 (1520)
Q Consensus 661 ----------~~EI-tsI~IP~~~ 673 (1520)
++|| ++|.||.+.
T Consensus 155 ~~~~~~t~L~~~Eil~~I~iP~~~ 178 (296)
T 3hrd_C 155 EGFKRRNALEADEIMTEVIIDRPD 178 (296)
T ss_dssp CSSSSSSSCCTTCEEEEEEEECCC
T ss_pred cccccccCCCCCcEEEEEEecCCC
Confidence 3689 999999864
No 22
>1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3
Probab=99.95 E-value=3.8e-28 Score=278.33 Aligned_cols=148 Identities=17% Similarity=0.164 Sum_probs=135.9
Q ss_pred cEEEEcCCHHHHHHHHhcCCCCCCcEEEEecchhhhccCCC--CCCeeeeCCCcccccceEEeCCeEEEccccCHHHHHH
Q psy7003 516 GIWYIVTEVREIFEIFDGLEANQTYMLVGGNTGYGVYRPRV--PVDVYIQIRDIKELRQIFTRNGYVLMGSATTLTEAMD 593 (1520)
Q Consensus 516 ~~~~rPtSLeEal~ll~~~p~~~~a~lVAGGTdLgv~~k~~--~~~~lIdIs~I~EL~~I~~~~~~L~IGA~vTlsel~e 593 (1520)
.+|++|+|++|+++++++++ +++++||||++++++|.+ .++.+|||++|+||+.|+.++++|+|||++|++++++
T Consensus 6 f~y~~P~sl~ea~~ll~~~~---~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vt~~~l~~ 82 (288)
T 1t3q_C 6 FSYRAPASLQEVIQVLADDP---DARIIAGGQSLLPLLAFRLVYPSCLVDLRNVSELFEISQSAGILSVGAMVTHFRNKT 82 (288)
T ss_dssp CEEECCSSHHHHHHHHHHCT---TCEEESSCTTHHHHHHTTCCCCSEEEECTTCGGGGCEEEETTEEEEETTCBHHHHHH
T ss_pred ceEECCCCHHHHHHHHhhCC---CCEEEeCchhHHHHHhcCCCCCCEEEECCCChhhcCeEEcCCEEEEcCCCcHHHHhc
Confidence 57999999999999999876 899999999999997654 4589999999999999999999999999999999997
Q ss_pred hhhhccCCchhhhhHHHHHHHHHhhcchhHhccc---ccCCCCCCCCCcc-----CCcEEEEEecCceee--ccccc---
Q psy7003 594 YFDRTSKTDANFEYMRIMKDHLEQVAHYAVRNFA---LGLSTTEVSPSLW-----SGARMIQIERAMSQG--SEDFE--- 660 (1520)
Q Consensus 594 ~L~~~~~~~~~~~~~~~La~al~~IAs~qIRN~A---GNL~~asp~SDL~-----lgA~V~I~s~~g~R~--l~dFf--- 660 (1520)
++...++++.|.+++++||++||||+| ||||+++|+||++ +||+|++.+.+|.|+ ++|||
T Consensus 83 -------~~~~~~~~p~L~~a~~~ias~qiRN~aTiGGNi~~a~p~sD~~~~L~Al~A~v~l~~~~g~R~vp~~dF~~g~ 155 (288)
T 1t3q_C 83 -------DPTVAKCVPILPKVLAHVAHQAVRNRGTLGGSLAHADAGAEMPFLMATLGATMYIASSAGVRSVSATDFMKGH 155 (288)
T ss_dssp -------CHHHHHHCTHHHHHHTTSSCHHHHTTCBHHHHHHHTCTTCHHHHHHHHTTCEEEEEETTEEEEEEHHHHEEET
T ss_pred -------CHHHHHHHHHHHHHHHHhCCHHHHcceechhhcccCCCcHHHHHHHHHcCcEEEEEcCCceEEEEHHHHhcCc
Confidence 455566789999999999999999999 9999999999999 999999999999888 89999
Q ss_pred ------cCce-eeeeeCCCC
Q psy7003 661 ------TKQN-LWPLTKPLP 673 (1520)
Q Consensus 661 ------~~EI-tsI~IP~~~ 673 (1520)
++|| ++|+||.+.
T Consensus 156 ~~t~L~~~Eil~~I~iP~~~ 175 (288)
T 1t3q_C 156 YFTDLEAGEVLVRVEIPIPA 175 (288)
T ss_dssp TEESCCTTCEEEEEEEECCS
T ss_pred ccccCCCCCEEEEEEecCCC
Confidence 5899 999999764
No 23
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C*
Probab=99.94 E-value=3.6e-27 Score=270.29 Aligned_cols=148 Identities=14% Similarity=0.085 Sum_probs=135.1
Q ss_pred cEEEEcCCHHHHHHHHhcC-CCCCCcEEEEecchhhhccCCC--CCCeeeeCCCcccccceEEeCCeEEEccccCHHHHH
Q psy7003 516 GIWYIVTEVREIFEIFDGL-EANQTYMLVGGNTGYGVYRPRV--PVDVYIQIRDIKELRQIFTRNGYVLMGSATTLTEAM 592 (1520)
Q Consensus 516 ~~~~rPtSLeEal~ll~~~-p~~~~a~lVAGGTdLgv~~k~~--~~~~lIdIs~I~EL~~I~~~~~~L~IGA~vTlsel~ 592 (1520)
.+|++|+|++|++++++++ + +++++||||+++++++.+ .++.+||+++|+||+.|+.++++|+|||++|++++.
T Consensus 6 ~~~~~P~sl~ea~~ll~~~~~---~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~~t~~~l~ 82 (288)
T 1n62_C 6 FDYHRPKSIADAVALLTKLGE---DARPLAGGHSLIPIMKTRLATPEHLVDLRDIGDLVGIREEGTDVVIGAMTTQHALI 82 (288)
T ss_dssp CEEECCSSHHHHHHHHHHHGG---GEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGSCEEEETTEEEEETTCBHHHHH
T ss_pred eEEECcCCHHHHHHHHHhcCC---CCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcceEecCCEEEEccCCcHHHHh
Confidence 4799999999999999876 5 799999999999987654 558999999999999999999999999999999999
Q ss_pred HhhhhccCCchhhhhHHHHHHHHHhhcchhHhccc---ccCCCCCCCCCcc-----CCcEEEEEecCceee--ccccc--
Q psy7003 593 DYFDRTSKTDANFEYMRIMKDHLEQVAHYAVRNFA---LGLSTTEVSPSLW-----SGARMIQIERAMSQG--SEDFE-- 660 (1520)
Q Consensus 593 e~L~~~~~~~~~~~~~~~La~al~~IAs~qIRN~A---GNL~~asp~SDL~-----lgA~V~I~s~~g~R~--l~dFf-- 660 (1520)
+ ++...++++.|.++++++|++||||+| ||||+++|+||++ +||+|++.+.+|.|+ ++|||
T Consensus 83 ~-------~~~~~~~~p~L~~a~~~ia~~qiRN~gTiGGnl~~a~p~sD~~~~L~Al~A~v~l~~~~G~r~v~~~df~~g 155 (288)
T 1n62_C 83 G-------SDFLAAKLPIIRETSLLIADPQIRYMGTIGGNAANGDPGNDMPALMQCLGAAYELTGPEGARIVAARDYYQG 155 (288)
T ss_dssp H-------CHHHHHHCHHHHHHHTTSSCHHHHHHCBHHHHHHSCCTTCSHHHHHHHHTCEEEEEETTEEEEEEHHHHEEE
T ss_pred c-------ChHHHHHHHHHHHHHHHhCCHHHHccccccchhccCCCchHHHHHHHHhCcEEEEEeCCccEEEEHHHHhcC
Confidence 6 444456789999999999999999999 9999999999999 999999999999887 89999
Q ss_pred -------cCce-eeeeeCCCC
Q psy7003 661 -------TKQN-LWPLTKPLP 673 (1520)
Q Consensus 661 -------~~EI-tsI~IP~~~ 673 (1520)
++|| ++|.||.+.
T Consensus 156 ~~~t~l~~~eil~~i~ip~~~ 176 (288)
T 1n62_C 156 AYFTAIEPGELLTAIRIPVPP 176 (288)
T ss_dssp TTEESCCTTCEEEEEEEECCC
T ss_pred cccccCCCCCEEEEEEeCCCC
Confidence 5899 999999765
No 24
>1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B*
Probab=99.93 E-value=2.3e-26 Score=266.93 Aligned_cols=146 Identities=16% Similarity=0.035 Sum_probs=132.6
Q ss_pred cEEEEcCCHHHHHHHHhcCCCCCCcEEEEecchhhhccCCC--CCCeeeeCCCcccccceEEeCC-eEEEccccCHHHHH
Q psy7003 516 GIWYIVTEVREIFEIFDGLEANQTYMLVGGNTGYGVYRPRV--PVDVYIQIRDIKELRQIFTRNG-YVLMGSATTLTEAM 592 (1520)
Q Consensus 516 ~~~~rPtSLeEal~ll~~~p~~~~a~lVAGGTdLgv~~k~~--~~~~lIdIs~I~EL~~I~~~~~-~L~IGA~vTlsel~ 592 (1520)
-+|++|+|++|+++++++ + +++++||||+|++++|.+ .++.+|||++|+||+.|+.+++ +|+|||++|+++++
T Consensus 7 f~y~~P~sl~ea~~ll~~-~---~a~~lAGGT~l~~~~k~~~~~p~~lIdi~~i~eL~~I~~~~~~~l~IGA~vt~~~l~ 82 (324)
T 1rm6_B 7 FRTHRPATLADAVNALAA-E---ATLPLGAGTDLLPNLRRGLGHPAALVDLTGIDGLATISTLADGSLRIGAGATLEAIA 82 (324)
T ss_dssp CEEECCSSHHHHHHHTTS-T---TEEEESSCTTHHHHHHTTSCCCSEEEECTTSTTTTCEEECTTSCEEEETTCBHHHHH
T ss_pred eEEEccCCHHHHHHHHhC-C---CCEEEECchhHHHHHhccCCCCCEEEECCCChhhcceEECCCCeEEEccCCcHHHHH
Confidence 469999999999999985 6 799999999999987654 4589999999999999999765 99999999999999
Q ss_pred HhhhhccCCchhhhhHHHHHHHHHhhcchhHhccc---ccC--------------------------------------C
Q psy7003 593 DYFDRTSKTDANFEYMRIMKDHLEQVAHYAVRNFA---LGL--------------------------------------S 631 (1520)
Q Consensus 593 e~L~~~~~~~~~~~~~~~La~al~~IAs~qIRN~A---GNL--------------------------------------~ 631 (1520)
+ ++.+.+++|.|+++++++|++||||+| ||| |
T Consensus 83 ~-------~~~~~~~~p~L~~a~~~ias~qIRN~aTiGGNl~~~~rC~y~~~~~~~k~~g~~c~a~~g~~~~~a~~g~~c 155 (324)
T 1rm6_B 83 E-------HDAIRTTWPALAQAAESVAGPTHRAAATLGGNLCQDTRCTFYNQSEWWRSGNGYCLKYKGDKCHVIVKSDRC 155 (324)
T ss_dssp H-------CHHHHHHSHHHHHHHHHSSCHHHHHHCBHHHHHTCCCBCTTTSSCHHHHHHTTCBTTBBCSCCSSSTTCSSC
T ss_pred h-------ChHHHHHHHHHHHHHHHhCCHHHcceeEeeeecccccccccccccccccccCccccccccccceeecccccc
Confidence 8 555677899999999999999999999 999 5
Q ss_pred CCCCCCCcc-----CCcEEEEEecCceee--ccccc-----------cCce-eeeeeCCC
Q psy7003 632 TTEVSPSLW-----SGARMIQIERAMSQG--SEDFE-----------TKQN-LWPLTKPL 672 (1520)
Q Consensus 632 ~asp~SDL~-----lgA~V~I~s~~g~R~--l~dFf-----------~~EI-tsI~IP~~ 672 (1520)
+++|+||++ +||+|++.+.+|+|+ ++||| ++|| ++|.||+.
T Consensus 156 ~a~p~sD~~~~L~AldA~v~l~~~~g~R~vp~~dF~~~~~~~~t~L~~~Eil~~I~iP~~ 215 (324)
T 1rm6_B 156 YATYHGDVAPALMVLDARAEIVGPAGKRTVPVAQLFRESGAEHLTLEKGELLAAIEVPPT 215 (324)
T ss_dssp CCBCCCSHHHHHHHTTCEEEEEETTEEEEEEGGGGBCSCTTSCBCCCTTCEEEEEEECCC
T ss_pred cCCCcchhHHHHHHcCCEEEEEeCCCcEEEEHHHHhcCCccccccCCCCCEEEEEEecCC
Confidence 999999999 999999999999888 89999 3799 99999953
No 25
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C*
Probab=99.91 E-value=7e-25 Score=251.28 Aligned_cols=148 Identities=14% Similarity=0.107 Sum_probs=133.6
Q ss_pred cEEEEcCCHHHHHHHHhcC-CCCCCcEEEEecchhhhccCCC--CCCeeeeCCCcccccceEEeCCeEEEccccCHHHHH
Q psy7003 516 GIWYIVTEVREIFEIFDGL-EANQTYMLVGGNTGYGVYRPRV--PVDVYIQIRDIKELRQIFTRNGYVLMGSATTLTEAM 592 (1520)
Q Consensus 516 ~~~~rPtSLeEal~ll~~~-p~~~~a~lVAGGTdLgv~~k~~--~~~~lIdIs~I~EL~~I~~~~~~L~IGA~vTlsel~ 592 (1520)
.+|++|+|++|++++++++ + ++++++|||+++++++.+ .+..+||+++|+||+.|+.++++|+|||++|++++.
T Consensus 6 ~~~~~P~s~~ea~~ll~~~~~---~~~ilaGGT~ll~~~~~~~~~~~~lIdl~~i~eL~~i~~~~~~l~iGA~~tl~~l~ 82 (287)
T 1ffv_C 6 FEYHAPKSVGEAVALLGQLGS---DAKLLAGGHSLLPMMKLRFAQPEHLIDINRIPELRGIREEGSTVVIGAMTVENDLI 82 (287)
T ss_dssp CEEECCSSHHHHHHHHHHHGG---GEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEEETTEEEEETTCBHHHHH
T ss_pred ceEECCCCHHHHHHHHHhcCC---CCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcceEecCCEEEEccCCcHHHHh
Confidence 4799999999999999876 5 799999999999986654 458999999999999999999999999999999999
Q ss_pred HhhhhccCCchhhhhHHHHHHHHHhhcchhHhccc---ccCCCCCCCCCcc-----CCcEEEEEecCceee--ccccc--
Q psy7003 593 DYFDRTSKTDANFEYMRIMKDHLEQVAHYAVRNFA---LGLSTTEVSPSLW-----SGARMIQIERAMSQG--SEDFE-- 660 (1520)
Q Consensus 593 e~L~~~~~~~~~~~~~~~La~al~~IAs~qIRN~A---GNL~~asp~SDL~-----lgA~V~I~s~~g~R~--l~dFf-- 660 (1520)
+ ++...+.++.|.++++++|++||||+| |||++++|.+|+. +||+|++.+.+|.|+ ++|||
T Consensus 83 ~-------~~~~~~~~~~L~~a~~~~a~~qiRN~gTvGGni~~~~~~~D~~~~l~Al~A~v~~~~~~G~r~i~~~df~~g 155 (287)
T 1ffv_C 83 S-------SPIVQARLPLLAEAAKLIADPQVRNRGTIGGDIAHGDPGNDHPALSIAVEAHFVLEGPNGRRTVPADGFFLG 155 (287)
T ss_dssp H-------CHHHHHHCHHHHHHGGGSSCTTGGGTCBHHHHHHTCCTTCSHHHHHHHTTCEEEEEETTEEEEEESTTTEEE
T ss_pred h-------ChHHHHHhHHHHHHHHHhCCHHHhcceechhhhccCCCcHHHHHHHHHcCcEEEEEcCCceEEEEHHHHhcC
Confidence 6 333455789999999999999999999 9999999999999 999999999999777 89998
Q ss_pred -------cCce-eeeeeCCCC
Q psy7003 661 -------TKQN-LWPLTKPLP 673 (1520)
Q Consensus 661 -------~~EI-tsI~IP~~~ 673 (1520)
++|| ++|.||...
T Consensus 156 ~~~t~l~~~eii~~i~ip~~~ 176 (287)
T 1ffv_C 156 TYMTLLEENEVMVEIRVPAFA 176 (287)
T ss_dssp TTEESCCTTCEEEEEEEECCC
T ss_pred cccccCCCCCEEEEEEecCCC
Confidence 5899 999999765
No 26
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=99.90 E-value=8e-25 Score=293.13 Aligned_cols=101 Identities=37% Similarity=0.725 Sum_probs=91.2
Q ss_pred CCCcceEEEECCEEEEecccCCCCcchhHHHHhhhcccCccccccCCCccceeeeeccC---------------------
Q psy7003 293 DTSSTVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTSS--------------------- 351 (1520)
Q Consensus 293 ~~~~~~~f~~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~~g~cGactV~v~~~--------------------- 351 (1520)
.+++.++|++||+.+++ .+++|++|||+|||++++|+|||++|++||||||||+|+..
T Consensus 5 ~~~~~l~F~vNG~~v~~-~~~~p~~tLl~~LR~~~~ltGTK~gC~EG~CGACtV~v~~~~~~~~~~~~~avNsCl~~l~~ 83 (1335)
T 3zyv_A 5 KESDELIFFVNGKKVTE-RNADPEVNLLFYLRKVIRLTGTKYGCGGGDCGACTVMISRYDPISKRISHFSATACLVPICS 83 (1335)
T ss_dssp --CCCEEEEETTEEEEE-SSCCTTCBHHHHHHHTTCCTTSCCSCSSSSSCTTEEEEEEEETTTTEEEEEEEETTTCBGGG
T ss_pred CCCCeEEEEECCEEEEe-CCCCcCccHHHHHhccCCCcccccccCCCCCcceEEEEeeEeCCCCeEEEEEhhHHHHHHHH
Confidence 35678999999999888 68999999999999999999999999999999999998631
Q ss_pred -------------------CCccccccccccccccccc--------------------------ccCccccccCCccchh
Q psy7003 352 -------------------HPVTGVDSTYSVNACGDRC--------------------------FTRNICRCTGFRPILD 386 (1520)
Q Consensus 352 -------------------hpvq~~~~~~~~~~Cg~~C--------------------------~~gNLCRCTgyrpIld 386 (1520)
||||+.++.+||+||| || +.||||||||||||+|
T Consensus 84 ~~g~~v~TvEglg~~~~~lHpvQ~~~a~~hgsQCG-FCTPGfVMSmyall~~~~~pt~~~ie~al~GNLCRCTGYRPIld 162 (1335)
T 3zyv_A 84 LHGAAVTTVEGIGSTKTRIHPVQERIAKGHGTQCG-FCTPGMVMSIYTLLRNHPEPSTEQIMETLGGNLCRCTGYRPIVE 162 (1335)
T ss_dssp CTTCEEECHHHHCCTTSCCCHHHHHHHHTTCCSSC-TTHHHHHHHHHHHHHHCSSCCHHHHHHHHTTCCCSSSCSHHHHH
T ss_pred hcCCEEEeeCCCCCCCCCCCHHHHHHHhcCCCcCC-CCCcHHHHHHHHHHHcCCCCCHHHHHHHhCCcccccCCCHHHHH
Confidence 9999999999999999 88 4999999999999999
Q ss_pred hhhcccCCC
Q psy7003 387 AFQSFSCDA 395 (1520)
Q Consensus 387 a~~~~~~~~ 395 (1520)
|+++|+.+.
T Consensus 163 A~ksfa~~~ 171 (1335)
T 3zyv_A 163 SAKSFCPSS 171 (1335)
T ss_dssp HHHTTCC--
T ss_pred HHHHhhccC
Confidence 999998764
No 27
>3nvw_A Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, guanine, oxidoredu; HET: FAD MTE GUN; 1.60A {Bos taurus} PDB: 3etr_A* 3ns1_A* 3nvv_A* 3nrz_A* 3nvy_A* 3nvz_A* 3rca_A* 3sr6_A* 3eub_A*
Probab=99.85 E-value=3.3e-22 Score=209.81 Aligned_cols=96 Identities=41% Similarity=0.848 Sum_probs=86.7
Q ss_pred CcceEEEECCEEEEecccCCCCcchhHHHHhhhcccCccccccCCCccceeeeec----------c--------------
Q psy7003 295 SSTVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVT----------S-------------- 350 (1520)
Q Consensus 295 ~~~~~f~~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~~g~cGactV~v~----------~-------------- 350 (1520)
+++|+|++||+.+.. .+++|+++|++|||++++++|||.+|++|+||||||+|. .
T Consensus 2 ~~~i~~~vNG~~~~~-~~~~p~~~Ll~~LR~~lgltGtK~GC~~G~CGACTVlvd~~~~~~~~~~g~~v~SCl~~a~~~~ 80 (164)
T 3nvw_A 2 ADELVFFVNGKKVVE-KNADPETTLLAYLRRKLGLRGTKLGCGEGGCGACTVMLSKYDRLQDKIIHFSANACLAPICTLH 80 (164)
T ss_dssp CCCEEEEETTEEEEE-TTCCTTCBHHHHHHHTSCCTTSCCSCSSSSSCTTEEEEEEEETTTTEEEEEEEETTTCBGGGCT
T ss_pred CceEEEEECCEEEEE-ecCCCCCCHHHHHHHHcCCCCcCCCcCCCCCCCCEEEEccccccccccCCcEEehhhhhHHHhC
Confidence 467999999998643 478999999999999999999999999999999999986 1
Q ss_pred ----------------CCCccccccccccccccccc--------------------------ccCccccccCCccchhhh
Q psy7003 351 ----------------SHPVTGVDSTYSVNACGDRC--------------------------FTRNICRCTGFRPILDAF 388 (1520)
Q Consensus 351 ----------------~hpvq~~~~~~~~~~Cg~~C--------------------------~~gNLCRCTgyrpIlda~ 388 (1520)
.||+|++.++.++.||| +| +.|||||||||++|+||+
T Consensus 81 G~~I~TiEGL~~~~~~lhpvQ~af~~~~~~QCG-fCtPG~imsa~aLl~~~p~pt~~eI~~al~GNlCRCTgY~~I~~Av 159 (164)
T 3nvw_A 81 HVAVTTVEGIGSTKTRLHPVQERIAKSHGSQCG-FCTPGIVMSMYTLLRNQPEPTVEEIEDAFQGNLCRCTGYRPILQGF 159 (164)
T ss_dssp TCEEECGGGTCCTTSCCCHHHHHHHHTTCCSSC-TTHHHHHHHHHHHHHHCSSCCHHHHHTSCTTCCCSSSCSHHHHHHH
T ss_pred CcceEEecccCCCCCccCHHHHHHHHcCCCcCc-cchhhHHHHHHHHHHhCCCCCHHHHHHHHcCCCCCCCCCHHHHHHH
Confidence 18999999999999999 88 489999999999999999
Q ss_pred hccc
Q psy7003 389 QSFS 392 (1520)
Q Consensus 389 ~~~~ 392 (1520)
++|+
T Consensus 160 ~~~~ 163 (164)
T 3nvw_A 160 RTFA 163 (164)
T ss_dssp HTTC
T ss_pred HHHh
Confidence 9875
No 28
>3hrd_D Nicotinate dehydrogenase small FES subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=99.77 E-value=8.5e-20 Score=191.53 Aligned_cols=93 Identities=32% Similarity=0.607 Sum_probs=85.0
Q ss_pred ceEEEECCEEEEecccCCCCcchhHHHHhhhcccCccccccCCCccceeeeecc--------------------------
Q psy7003 297 TVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTS-------------------------- 350 (1520)
Q Consensus 297 ~~~f~~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~~g~cGactV~v~~-------------------------- 350 (1520)
+++|++||+.+.+ +++|++||+++||+.++++|+|.+|..|.||+|||+|..
T Consensus 5 ~i~~~vNG~~~~v--~v~p~~tLLd~LR~~lgltgtk~gC~~G~CGACtV~vdG~~v~sC~~~~~~~~G~~I~TiEgl~~ 82 (160)
T 3hrd_D 5 TINLNLNGEARSI--VTEPNKRLLDLLREDFGLTSVKEGCSEGECGACTVIFNGDPVTTCCMLAGQADESTIITLEGVAE 82 (160)
T ss_dssp EEEEEETTEEEEE--EECSSSBHHHHHHTTSCCTTSCCSSSSSSSCTTEEEETTEEEEGGGSBGGGGTTEEEECGGGTSB
T ss_pred eEEEEECCEEEEE--ecCCCCCHHHHHHHhcCCCccccccCCCCCCCCEEEECCEEEEchhhhhhhhCCCceEEeCCCCC
Confidence 6899999999887 478999999999999999999999999999999998742
Q ss_pred ---CCCccccccccccccccccc--------------------------ccCccccccCCccchhhhhccc
Q psy7003 351 ---SHPVTGVDSTYSVNACGDRC--------------------------FTRNICRCTGFRPILDAFQSFS 392 (1520)
Q Consensus 351 ---~hpvq~~~~~~~~~~Cg~~C--------------------------~~gNLCRCTgyrpIlda~~~~~ 392 (1520)
.||+|++.++.++.||| +| +.|||||||||++|++|.+.++
T Consensus 83 ~~~l~pvq~af~~~~~~QCG-fCtpG~ims~~all~~~~~pt~~eI~~al~GNlCRCtgY~~I~~Av~~aa 152 (160)
T 3hrd_D 83 DGKPSLLQQCFLEAGAVQCG-YCTPGMILTAKALLDKNPDPTDEEITVAMSGNLCRCTGYIKIHAAVRYAV 152 (160)
T ss_dssp TTBCCHHHHHHHHHTCCSSC-SSHHHHHHHHHHHHTTCSSCCHHHHHHHHTTCCCSSSCSHHHHHHHHHHH
T ss_pred CCccCHHHHHHHHcCCCcCC-cchhhHHHHHHHHHHhCCCCCHHHHHHHHcCCCCCCCCcHHHHHHHHHHH
Confidence 29999999999999999 88 4899999999999999998764
No 29
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=99.72 E-value=1.7e-18 Score=231.43 Aligned_cols=98 Identities=40% Similarity=0.818 Sum_probs=87.5
Q ss_pred cceEEEECCEEEEecccCCCCcchhHHHHhhhcccCccccccCCCccceeeeec-----------c--------------
Q psy7003 296 STVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVT-----------S-------------- 350 (1520)
Q Consensus 296 ~~~~f~~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~~g~cGactV~v~-----------~-------------- 350 (1520)
..|+|++||+.+.+ .+++|++||++|||++++|+|||++|++|+||||||+|. .
T Consensus 4 ~~i~~~vNg~~~~~-~~~~p~~~ll~~LR~~~~ltgtk~gC~~g~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g 82 (1332)
T 3unc_A 4 DELVFFVNGKKVVE-KNADPETTLLAYLRRKLGLRGTKLGCGEGGCGACTVMLSKYDRLQDKIIHFSANACLAPICTLHH 82 (1332)
T ss_dssp CCEEEEETTEEEEE-TTCCTTCBHHHHHHHTSCCTTSCCSCSSSSSCTTEEEEEEEETTTTEEEEEEEETTTCBGGGCTT
T ss_pred ccEEEEECCEEEEe-ecCCCCCCHHHHHhhhcCCCCcCCCcCCCCCCCcEEEEecccccccccCCeEeehHHhhHHHhCC
Confidence 47999999999876 478999999999999999999999999999999999993 1
Q ss_pred ---------------CCCccccccccccccccccc--------------------------ccCccccccCCccchhhhh
Q psy7003 351 ---------------SHPVTGVDSTYSVNACGDRC--------------------------FTRNICRCTGFRPILDAFQ 389 (1520)
Q Consensus 351 ---------------~hpvq~~~~~~~~~~Cg~~C--------------------------~~gNLCRCTgyrpIlda~~ 389 (1520)
.||+|++.+..++.||| +| +.|||||||||++|++|++
T Consensus 83 ~~i~TiEgl~~~~~~~hpvq~a~~~~~~~QCG-~CtpG~vms~~~ll~~~~~p~~~~i~~~l~gnlCRCtgy~~i~~a~~ 161 (1332)
T 3unc_A 83 VAVTTVEGIGSTKTRLHPVQERIAKSHGSQCG-FCTPGIVMSMYTLLRNQPEPTVEEIEDAFQGNLCRCTGYRPILQGFR 161 (1332)
T ss_dssp CEEECGGGTCCTTSCCCHHHHHHHHTTCCSSC-TTHHHHHHHHHHHHHHCSSCCHHHHHHTTTTCCCSSSCSHHHHHHHG
T ss_pred CEEEEeccccCCCCCcCHHHHHHHHhCCCCCC-CCccHHHHHHHHHHHhcCCCCHHHHHHHHhCCcccCCCchhHHHHHH
Confidence 29999999999999999 88 4899999999999999999
Q ss_pred cccCCC
Q psy7003 390 SFSCDA 395 (1520)
Q Consensus 390 ~~~~~~ 395 (1520)
.++.+.
T Consensus 162 ~~~~~~ 167 (1332)
T 3unc_A 162 TFAKNG 167 (1332)
T ss_dssp GGC---
T ss_pred HHhhcC
Confidence 987653
No 30
>1ffv_A CUTS, iron-sulfur protein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: a.56.1.1 d.15.4.2 PDB: 1ffu_A*
Probab=99.72 E-value=2e-18 Score=182.10 Aligned_cols=93 Identities=33% Similarity=0.615 Sum_probs=84.6
Q ss_pred ceEEEECCEEEEecccCCCCcchhHHHHhhhcccCccccccCCCccceeeeecc--------------------------
Q psy7003 297 TVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTS-------------------------- 350 (1520)
Q Consensus 297 ~~~f~~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~~g~cGactV~v~~-------------------------- 350 (1520)
+++|++||+.+++ +++|++||+++||+.++++|+|.+|..|.||+|||+|..
T Consensus 5 ~i~~~vNG~~~~~--~v~~~~tLLd~LR~~lgltg~k~gC~~G~CGaCtV~vdG~~v~sC~~~~~~~~G~~I~TiEgL~~ 82 (163)
T 1ffv_A 5 IITVNVNGKAQEK--AVEPRTLLIHFLREELNLTGAHIGCETSHCGACTVDIDGRSVKSCTHLAVQCDGSEVLTVEGLAN 82 (163)
T ss_dssp EEEEEETTEEEEE--EECTTCBHHHHHHHTSCCTTSCCCCSSSCSCTTEEEETTEEEEGGGSBGGGGTTCEEECGGGTSB
T ss_pred eEEEEECCEEEEE--ecCCCCcHHHHHHhcCCCcccccCCCCCCCCCCEEEECCcEecchHhhHHHhCCceEEEECCCCC
Confidence 6899999999987 578999999999999999999999999999999999742
Q ss_pred ---CCCccccccccccccccccc--------------------------ccCccccccCCccchhhhhccc
Q psy7003 351 ---SHPVTGVDSTYSVNACGDRC--------------------------FTRNICRCTGFRPILDAFQSFS 392 (1520)
Q Consensus 351 ---~hpvq~~~~~~~~~~Cg~~C--------------------------~~gNLCRCTgyrpIlda~~~~~ 392 (1520)
.||+|++.++.++.||| +| +.|||||||||++|++|.+.++
T Consensus 83 ~~~l~pvq~a~~~~~~~QCG-~CtpG~imsa~all~~~~~pt~~ei~~~l~gnlCRCtgY~~I~~Av~~~a 152 (163)
T 1ffv_A 83 KGVLHAVQEGFYKEHGLQCG-FCTPGMLMRAYRFLQENPNPTEAEIRMGMTGNLCRCTGYQNIVKAVQYAA 152 (163)
T ss_dssp TTBCCHHHHHHHHTTCCSSC-SSHHHHHHHHHHHHHHCSSCCHHHHHHHTTTCCCSSSCSHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHhCCccCc-cccHhHHHHHHHHHHcCCCCCHHHHHHHHcCCccCCCCCHHHHHHHHHHH
Confidence 28999999999999999 88 4899999999999999998764
No 31
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=99.71 E-value=2.7e-18 Score=208.12 Aligned_cols=93 Identities=37% Similarity=0.727 Sum_probs=84.4
Q ss_pred ceEEEECCEEEEecccCCCCcchhHHHHhhhcccCccccccCCCccceeeeecc--------------------------
Q psy7003 297 TVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTS-------------------------- 350 (1520)
Q Consensus 297 ~~~f~~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~~g~cGactV~v~~-------------------------- 350 (1520)
+++|++||+.+++ .+.+|++||+++|| +.+++|+|.+|.+|.||||||+|+.
T Consensus 2 ~~~~~vNg~~~~~-~~~~~~~~Ll~~Lr-~~~l~g~k~gC~~G~CGaCtV~v~~~~~g~~v~sCl~~~~~~~g~~i~TiE 79 (462)
T 2w3s_A 2 EIAFLLNGETRRV-RIEDPTQSLLEWLR-AEGLTGTKEGCNEGDCGACTVMIRDAAGSRAVNACLMMLPQIAGKALRTIE 79 (462)
T ss_dssp EEEEEETTEEEEE-ECSCTTCBHHHHHH-HTTCTTSCCSCSSSSSCTTEEEEEETTEEEEEETTTCBGGGGTTCEEECGG
T ss_pred cEEEEECCEEEEE-ecCCCCCcHHHHHH-HcCCCccCCCCCCCCcCCcEEEEEecCCCeEEEchhhhHHHhCCCcEEEEC
Confidence 5899999999988 35689999999999 9999999999999999999999921
Q ss_pred --------CCCccccccccccccccccc----------------------ccCccccccCCccchhhhhccc
Q psy7003 351 --------SHPVTGVDSTYSVNACGDRC----------------------FTRNICRCTGFRPILDAFQSFS 392 (1520)
Q Consensus 351 --------~hpvq~~~~~~~~~~Cg~~C----------------------~~gNLCRCTgyrpIlda~~~~~ 392 (1520)
.||+|++.++.++.||| +| +.|||||||||++|+||++.++
T Consensus 80 gl~~~~~~~~~~q~a~~~~~~~QCG-~CtpG~im~~~~ll~p~~~~i~~~l~gnlCRCtgy~~i~~a~~~~~ 150 (462)
T 2w3s_A 80 GIAAPDGRLHPVQQAMIDHHGSQCG-FCTPGFIVSMAAAHDRDRKDYDDLLAGNLCRCTGYAPILRAAEAAA 150 (462)
T ss_dssp GTSCTTSCCCHHHHHHHHTTCCSSC-TTHHHHHHHHHHHHHTTCCCHHHHSTTCCCSSSCSHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHhCCCCCC-CCcchHHHHHHHHHCCCHHHHHHHHcCCcccCCCcHHHHHHHHHHh
Confidence 18999999999999999 88 4899999999999999998874
No 32
>1n62_A Carbon monoxide dehydrogenase small chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: a.56.1.1 d.15.4.2 PDB: 1n5w_A* 1n61_A* 1n60_A* 1n63_A* 1zxi_A*
Probab=99.70 E-value=3.9e-18 Score=180.30 Aligned_cols=93 Identities=33% Similarity=0.607 Sum_probs=83.9
Q ss_pred ceEEEECCEEEEecccCCCCcchhHHHHhhhcccCccccccCCCccceeeeecc--------------------------
Q psy7003 297 TVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTS-------------------------- 350 (1520)
Q Consensus 297 ~~~f~~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~~g~cGactV~v~~-------------------------- 350 (1520)
+++|++||+.+++ +++|++||+++||+.++++|+|.+|..|.||+|||+|..
T Consensus 5 ~i~~~vNG~~~~~--~v~~~~tLLd~LR~~lgl~g~k~gC~~G~CGaCtV~vdG~~v~SC~~~~~~~~G~~V~TiEgL~~ 82 (166)
T 1n62_A 5 HIELTINGHPVEA--LVEPRTLLIHFIREQQNLTGAHIGCDTSHCGACTVDLDGMSVKSCTMFAVQANGASITTIEGMAA 82 (166)
T ss_dssp EEEEEETTEEEEE--EECTTCBHHHHHHHTSCCTTSCCCCSSSCSCTTEEEETTEEEEGGGSBGGGGTTCEEECGGGSSC
T ss_pred eEEEEECCEEEEE--ecCCCCcHHHHHHHcCCCCccccCCCCCCCCCCEEEECCcEEechhhhHHHhCCceEEEeCCCCC
Confidence 5899999999987 478999999999999999999999999999999998731
Q ss_pred ----CCCccccccccccccccccc--------------------------ccCccccccCCccchhhhhccc
Q psy7003 351 ----SHPVTGVDSTYSVNACGDRC--------------------------FTRNICRCTGFRPILDAFQSFS 392 (1520)
Q Consensus 351 ----~hpvq~~~~~~~~~~Cg~~C--------------------------~~gNLCRCTgyrpIlda~~~~~ 392 (1520)
.||+|++.++.++.||| +| +.|||||||||++|++|.+.++
T Consensus 83 ~~~~~~pvq~a~~~~~~~QCG-~CtpG~imsa~all~~~~~pt~~eI~~~l~gNlCRCtgY~~I~~Av~~~a 153 (166)
T 1n62_A 83 PDGTLSALQEGFRMMHGLQCG-YCTPGMIMRSHRLLQENPSPTEAEIRFGIGGNLCRCTGYQNIVKAIQYAA 153 (166)
T ss_dssp TTSCCCHHHHHHHHTTCCSSC-SSHHHHHHHHHHHHHHCSSCCHHHHHHHTTTCCCSSSTTHHHHHHHHHHH
T ss_pred cCCccCHHHHHHHHcCCccCC-ccchhHHHHHHHHHHcCCCCCHHHHHHHHcCCccCCCCCHHHHHHHHHHH
Confidence 18889999999999999 88 4899999999999999998764
No 33
>1rm6_C 4-hydroxybenzoyl-COA reductase gamma subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: a.56.1.1 d.15.4.2 PDB: 1sb3_C*
Probab=99.60 E-value=2.3e-16 Score=166.38 Aligned_cols=94 Identities=33% Similarity=0.645 Sum_probs=83.1
Q ss_pred cceEEEECCEEEEecccCCCCcchhHHHHhhhcccCccccccCCCccceeeeeccC------------------------
Q psy7003 296 STVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTSS------------------------ 351 (1520)
Q Consensus 296 ~~~~f~~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~~g~cGactV~v~~~------------------------ 351 (1520)
.+++|++||+.+++ +++|++||+++||+.++++|+|.+|..|.||+|||+|...
T Consensus 3 ~~i~~~vNG~~~~v--~~~~~~tLL~~Lr~~~gl~g~k~gC~~G~CGaCtV~vdG~~v~sC~~~~~~~~G~~v~TiEgL~ 80 (161)
T 1rm6_C 3 NILRLTLNGRARED--LVPDNMLLLDYLRETVGLTGTKQGCDGGECGACTVLVDDRPRLACSTLAHQVAGKKVETVESLA 80 (161)
T ss_dssp EEEEEEETTEEEEE--EEETTCBHHHHHHHTTCCTTSCCCSSSSSSCTTEEEETTEEEEGGGSBGGGGTTSEEECGGGSS
T ss_pred ceEEEEECCEEEEE--ecCCcCcHHHHHHHcCCCcccccCCCCCCCCCCEEEECCcEEechHHHHHHhCCceEEEECCCC
Confidence 46899999999988 4689999999999999999999999999999999998321
Q ss_pred -----CCccccccccccccccccc--------------------------ccCccccccCCccchhhhhccc
Q psy7003 352 -----HPVTGVDSTYSVNACGDRC--------------------------FTRNICRCTGFRPILDAFQSFS 392 (1520)
Q Consensus 352 -----hpvq~~~~~~~~~~Cg~~C--------------------------~~gNLCRCTgyrpIlda~~~~~ 392 (1520)
||+|++....++.||| +| ..|||||||||++|++|.+.++
T Consensus 81 ~~~~~~p~q~a~~~~~~~qCG-~Ctpg~im~a~~ll~~~~~pt~~~i~~~l~gnlcRCtgy~~i~~A~~~~~ 151 (161)
T 1rm6_C 81 TQGTLSKLQAAFHEKLGTQCG-FCTPGMIMASEALLRKNPSPSRDEIKAALAGNLCRCTGYVKIIKSVETAA 151 (161)
T ss_dssp BTTBCCHHHHHHHHHTCCSSC-SSHHHHHHHHHHHHHHCSSCCHHHHHHHTTTCCCSSSCSHHHHHHHHHHH
T ss_pred CCCccCHHHHHHHHhCCCcCC-CCchHHHHHHHHHHhcCCCCCHHHHHHHHcCCeECCCCCHHHHHHHHHHH
Confidence 7788888888889998 77 4799999999999999988764
No 34
>1vlb_A Aldehyde oxidoreductase; iron-sulphur cluster; HET: PCD; 1.28A {Desulfovibrio gigas} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1 PDB: 1sij_A* 1zcs_A* 3fah_A* 3fc4_A* 3l4p_A*
Probab=99.48 E-value=8.9e-15 Score=190.21 Aligned_cols=92 Identities=35% Similarity=0.681 Sum_probs=83.0
Q ss_pred ceEEEECCEEEEecccCCCCcchhHHHHhhhcccCccccccCCCccceeeeecc--------------------------
Q psy7003 297 TVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTS-------------------------- 350 (1520)
Q Consensus 297 ~~~f~~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~~g~cGactV~v~~-------------------------- 350 (1520)
+++|++||+.+++ +++|++||+++||+.++++|+|.+|.+|.||||||+|..
T Consensus 3 ~~~~~~ng~~~~~--~~~~~~~ll~~Lr~~~~l~g~k~gC~~g~CGaCtv~vdg~~~~sC~~~~~~~~~g~~i~Tiegl~ 80 (907)
T 1vlb_A 3 QKVITVNGIEQNL--FVDAEALLSDVLRQQLGLTGVKVGCEQGQCGACSVILDGKVVRACVTKMKRVADGAQITTIEGVG 80 (907)
T ss_dssp EEEEEETTEEEEE--EECTTSBHHHHHHHTTCCTTSCCSSSSSSSCTTEEEETTEEEEGGGCBGGGSCTTCEEECHHHHC
T ss_pred eEEEEECCEEEEE--ecCCCChHHHHHHHhcCCCeecCCCCCCCcCccEEEECCeEeechHhHHHHHcCCCcEEEECCCC
Confidence 5899999999998 578999999999999999999999999999999998731
Q ss_pred ----CCCccccccccccccccccc--------------------------cc--CccccccCCccchhhhhcc
Q psy7003 351 ----SHPVTGVDSTYSVNACGDRC--------------------------FT--RNICRCTGFRPILDAFQSF 391 (1520)
Q Consensus 351 ----~hpvq~~~~~~~~~~Cg~~C--------------------------~~--gNLCRCTgyrpIlda~~~~ 391 (1520)
.||+|++.++.++.||| +| +. |||||||||.+|.+|++..
T Consensus 81 ~~~~~~~~q~a~~~~~~~qCG-~c~pg~~~~~~~ll~~~~~p~~~~i~~~~~~~gn~cRctgY~~i~~a~~~a 152 (907)
T 1vlb_A 81 QPENLHPLQKAWVLHGGAQCG-FCSPGFIVSAKGLLDTNADPSREDVRDWFQKHRNACRCTGYKPLVDAVMDA 152 (907)
T ss_dssp BTTBCCHHHHHHHHHTCCSSC-TTHHHHHHHHHHHHTTCSSCCHHHHHHHHHHTTCCCSSSCSHHHHHHHHHH
T ss_pred CCcCcCHHHHHHHHcCCCCCC-cChHHHHHHHHHHHHcCCCCCHHHHHHHHHhcCCCccccchHHHHHHHHHH
Confidence 28999999999999999 88 25 9999999999999987643
No 35
>1dgj_A Aldehyde oxidoreductase; beta half-barrel, four-helix bundle, beta barrel; HET: MCN; 2.80A {Desulfovibrio desulfuricans} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1
Probab=99.47 E-value=7.5e-15 Score=190.88 Aligned_cols=92 Identities=37% Similarity=0.742 Sum_probs=82.8
Q ss_pred ceEEEECCEEEEecccCCCCcchhHHHHhhhcccCccccccCCCccceeeeecc--------------------------
Q psy7003 297 TVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTS-------------------------- 350 (1520)
Q Consensus 297 ~~~f~~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~~g~cGactV~v~~-------------------------- 350 (1520)
+++|++||+.+++ +++|+++||++||++++++|+|.+|..|.||||||+|..
T Consensus 3 ~~~~~~ng~~~~~--~~~~~~~ll~~Lr~~~~l~g~k~gC~~G~CGaCtv~vdg~~v~sC~~~~~~~~~g~~i~TiEgl~ 80 (907)
T 1dgj_A 3 TKTLIVNGMARRL--LVSPNDLLVDVLRSQLQLTSVKVGCGKGQCGACTVILDGKVVRACIIKMSRVAENASVTTLEGIG 80 (907)
T ss_dssp EEECEETTBCCEE--EECTTCBHHHHHHHTTCCTTSCCSSSSSSSCTTEEEETTEEEEGGGCBGGGSCTTCEEECGGGTC
T ss_pred eEEEEECCEEEEE--ecCCCCcHHHHHHHhcCCCccCCCCCCCCcCceEEEECCeEeehhHhHHHHHcCCCcEEEECCCC
Confidence 5899999999888 478999999999999999999999999999999998731
Q ss_pred ----CCCccccccccccccccccc--------------------------cc--CccccccCCccchhhhhcc
Q psy7003 351 ----SHPVTGVDSTYSVNACGDRC--------------------------FT--RNICRCTGFRPILDAFQSF 391 (1520)
Q Consensus 351 ----~hpvq~~~~~~~~~~Cg~~C--------------------------~~--gNLCRCTgyrpIlda~~~~ 391 (1520)
.||+|++.++.++.||| +| +. |||||||||.+|.+|++..
T Consensus 81 ~~~~~~~~q~a~~~~~~~qCG-~c~pg~~~~~~~ll~~~~~p~~~~i~~~~~~~gnlcRctgY~~i~~a~~~a 152 (907)
T 1dgj_A 81 APDCLHPLQHAWIQHGAAQCG-FCTPGFIVSAKALLDENVAPSREDVRDWFQKHHNICRCTGYKPLVDAVMDA 152 (907)
T ss_dssp BTTBCCHHHHHHHHHTCCSSC-TTHHHHHHHHHHHHHHCSSCCHHHHHHHHHHTTCCCSSSCSHHHHHHHHHH
T ss_pred CCcccCHHHHHHHHcCCCCCC-cChhHHHHHHHHHHhcCCCCCHHHHHHHHHhcCCCcccccHHHHHHHHHHH
Confidence 18999999999999999 88 26 9999999999999987643
No 36
>1t3q_A Quinoline 2-oxidoreductase small subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: a.56.1.1 d.15.4.2
Probab=99.40 E-value=1e-13 Score=147.27 Aligned_cols=95 Identities=33% Similarity=0.631 Sum_probs=81.6
Q ss_pred CcceEEEECCEEEEecccCCCCcchhHHHHhhhcccCccccccCCCccceeeeecc------------------------
Q psy7003 295 SSTVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTS------------------------ 350 (1520)
Q Consensus 295 ~~~~~f~~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~~g~cGactV~v~~------------------------ 350 (1520)
..+++|++||+.+.+ +++|++||+++||+.++++|+|.+|..|.||+|||+|..
T Consensus 9 ~m~i~~~ing~~~~~--~v~~~~tlL~~Lr~~~gl~g~~~~C~~G~CGaC~V~vdG~~v~sC~~~~~~~~G~~v~Tiegl 86 (168)
T 1t3q_A 9 LMRISATINGKPRVF--YVEPRMHLADALREVVGLTGTKIGCEQGVCGSCTILIDGAPMRSCLTLAVQAEGCSIETVEGL 86 (168)
T ss_dssp CEEEEEEETTEEEEE--EECTTSBHHHHHHHTTCCTTSCCSCSSSSSCTTEEEETTEEEEGGGSBGGGGTTCEEECGGGT
T ss_pred cceEEEEECCEEEEE--ecCCCCcHHHHHHhcCCCCccccCCCCCCCCCcEEEECCCEeechhhHHHHhCCCeEEEEcCC
Confidence 346899999999887 478999999999999999999999999999999999832
Q ss_pred -----CCCccccccccccccccccc--------------------------ccCccccccCCccchhhhhccc
Q psy7003 351 -----SHPVTGVDSTYSVNACGDRC--------------------------FTRNICRCTGFRPILDAFQSFS 392 (1520)
Q Consensus 351 -----~hpvq~~~~~~~~~~Cg~~C--------------------------~~gNLCRCTgyrpIlda~~~~~ 392 (1520)
.||+|++....++.||| +| +.|||||||+|++|.+|.+.++
T Consensus 87 ~~~~~~~~~q~a~~~~~~~qCG-~C~pg~i~~a~~ll~~~~~p~~~~i~~~l~gnlcRCt~y~~~v~A~~~~~ 158 (168)
T 1t3q_A 87 SQGEKLNALQDSFRRHHALQCG-FCTAGMLATARSILAENPAPSRDEVREVMSGNLCRCTGYETIIDAITDPA 158 (168)
T ss_dssp CCSSSCCHHHHHHHHTTCCSSC-SSHHHHHHHHHHHHHHCSSCCHHHHHHHGGGSCCSSSCSHHHHHHHTCHH
T ss_pred CCccccCHHHHHHHHhCCCcCC-CchHHHHHHHHHHHhcCCCCCHHHHHHHHcCCcccCCCchHHHHHHHHHH
Confidence 16777777777889998 77 4799999999999999887653
No 37
>3vr8_B Iron-sulfur subunit of succinate dehydrogenase; membrane protein, reductase, mitochondria MEMB oxidoreductase; HET: FAD HEM RQX EPH; 2.81A {Ascaris suum} PDB: 3vrb_B*
Probab=98.76 E-value=5.1e-09 Score=119.58 Aligned_cols=69 Identities=20% Similarity=0.389 Sum_probs=59.6
Q ss_pred EEEEEcccCCC-CCchHHHHHh---hcC-CCCCcCCCCCCCCCeeEEEECCccCCCCcccccccccchhhHHhcCCcEEE
Q psy7003 29 VVYIIGAEVPP-GTRLVDFIRD---YAR-LKGTKYMCREGGCGVCTVTVTSSHPVTGVDSTYSVNACLVLVHMCGGWAIT 103 (1520)
Q Consensus 29 ~~~~~~~~~~~-~~~l~~~lr~---~~~-l~g~k~~c~~g~cGactv~~~~~~~~~~~~~~~~v~scl~~~~~~~g~~i~ 103 (1520)
+.|++ ++++ ++||||+||+ +++ ..+++.+|++|.||+|+|.|||. ++.||++++....| .++
T Consensus 55 ~~~~v--~v~~~~~tlLdaL~~i~~~~~ptl~~~~~C~~G~CGsC~V~InG~----------~~laC~t~v~~~~~-~~~ 121 (282)
T 3vr8_B 55 QKFDV--DLDKCGTMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIAGE----------NTLACICNIDQNTS-KTT 121 (282)
T ss_pred EEEEE--EeCCCCCcHHHHHHhcCcccCCceeecCCCCCCCCCCCEEEECCE----------EecchhhhHhHhcC-CcE
Confidence 35777 6888 9999999996 334 48999999999999999999996 89999999987666 689
Q ss_pred EecCCCC
Q psy7003 104 TVEGLGS 110 (1520)
Q Consensus 104 T~eg~~~ 110 (1520)
|||||.+
T Consensus 122 tIepL~~ 128 (282)
T 3vr8_B 122 KIYPLPH 128 (282)
T ss_pred EeccCCC
Confidence 9999985
No 38
>2wdq_B Succinate dehydrogenase iron-sulfur subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_B* 2acz_B* 1nek_B* 2wdr_B* 2wdv_B* 2ws3_B* 2wu2_B* 2wu5_B* 2wp9_B*
Probab=98.64 E-value=2.4e-08 Score=111.19 Aligned_cols=68 Identities=21% Similarity=0.305 Sum_probs=60.1
Q ss_pred EEEEEcccCCC--CCchHHHHHhhc---CCCCCcCCCCCCCCCeeEEEECCccCCCCcccccccccchhhHHh--cCCcE
Q psy7003 29 VVYIIGAEVPP--GTRLVDFIRDYA---RLKGTKYMCREGGCGVCTVTVTSSHPVTGVDSTYSVNACLVLVHM--CGGWA 101 (1520)
Q Consensus 29 ~~~~~~~~~~~--~~~l~~~lr~~~---~l~g~k~~c~~g~cGactv~~~~~~~~~~~~~~~~v~scl~~~~~--~~g~~ 101 (1520)
+.+++ ++++ ++||||+||+.. +..+++.+|++|.||+|+|.|||. ++.||.+++.. +.|.+
T Consensus 21 ~~~~v--~~~~~~~~tll~~l~~~~~~~~~l~~~~~C~~g~Cg~C~v~v~G~----------~~laC~~~~~~~g~~~~~ 88 (238)
T 2wdq_B 21 QDYTL--EADEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSDGLNMNGK----------NGLACITPISALNQPGKK 88 (238)
T ss_dssp EEEEE--ECCTTCCCBHHHHHHHHHHHCTTCCCCCSSSSSSSCTTEEEETTE----------EEEGGGCBGGGTCCTTSC
T ss_pred EEEEe--ecCCCCCChHHHHHHHhcccCCCccccccCCCCCCCCCEEEECCE----------EEcccccchhhhccCCCC
Confidence 45666 6888 999999999875 788999999999999999999996 78899999998 76666
Q ss_pred EEEecCCC
Q psy7003 102 ITTVEGLG 109 (1520)
Q Consensus 102 i~T~eg~~ 109 (1520)
+|||+|.
T Consensus 89 -~~ie~l~ 95 (238)
T 2wdq_B 89 -IVIRPLP 95 (238)
T ss_dssp -EEEECCT
T ss_pred -EEEeeCC
Confidence 8999997
No 39
>3c8y_A Iron hydrogenase 1; dithiomethylether, H-cluster, iron-sulfur binding, oxidoreductase; HET: HCN; 1.39A {Clostridium pasteurianum} SCOP: c.96.1.1 d.15.4.2 d.58.1.5 PDB: 1c4c_A* 1c4a_A* 1feh_A*
Probab=98.52 E-value=4.7e-08 Score=122.03 Aligned_cols=104 Identities=24% Similarity=0.408 Sum_probs=85.3
Q ss_pred EEEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCc----CCC-C-CCCCCeeEEEECCccCCCCcccccccccchhhHH
Q psy7003 22 VRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTK----YMC-R-EGGCGVCTVTVTSSHPVTGVDSTYSVNACLVLVH 95 (1520)
Q Consensus 22 ~~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k----~~c-~-~g~cGactv~~~~~~~~~~~~~~~~v~scl~~~~ 95 (1520)
|+|+|||+.++ +++++|||+.+|+. |+..+. .+| + .|.||+|+|.|+|. ..+.||.+++.
T Consensus 2 v~~~ing~~v~----v~~g~tiL~a~~~~-gi~ip~lC~~~~~~~~~G~Cg~C~V~v~g~---------~~~~aC~t~v~ 67 (574)
T 3c8y_A 2 KTIIINGVQFN----TDEDTTILKFARDN-NIDISALCFLNNCNNDINKCEICTVEVEGT---------GLVTACDTLIE 67 (574)
T ss_dssp EEEEETTEEEE----ECCCCBHHHHHHHT-TCCCCCSSCBTTBCCSSSCCCTTEEEETTT---------EEEEGGGCBCC
T ss_pred eEEEECCEEEE----eCCCCHHHHHHHHc-CCCCCcccCCCCCCCCcccCCCCEEEeCCC---------cccccCCCCcc
Confidence 78999999876 56999999999985 664221 244 4 89999999999984 16899999987
Q ss_pred hcCCcEEEEecCCCCCCCCCCHHHHHHHHhCCCCCCCCchhHHHHHhh
Q psy7003 96 MCGGWAITTVEGLGSKKKGYHNVQTRLATMNGSQCGYCSPGMVMAMYS 143 (1520)
Q Consensus 96 ~~~g~~i~T~eg~~~~~~~~h~vq~~~~~~~~~qcg~ctpg~vm~~~~ 143 (1520)
+|..|+|.++... +.-+.+|+.|...|..+|++|.++..+.+..
T Consensus 68 --~gm~V~T~~~~~~--~~r~~~lelll~~h~~~C~~C~~~~~C~Lq~ 111 (574)
T 3c8y_A 68 --DGMIINTNSDAVN--EKIKSRISQLLDIHEFKCGPCNRRENCEFLK 111 (574)
T ss_dssp --TTCEEESSCHHHH--HHHHHHHHHHHTTSCCCCTTCTTTTSCHHHH
T ss_pred --cceeEEecchhhh--hhHHHHHHHHHhccCCCCCcCCCCcchHHHH
Confidence 8999999999863 2346799999999999999999998777665
No 40
>2bs2_B Quinol-fumarate reductase iron-sulfur subunit B; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.1.2.1 d.15.4.2 PDB: 2bs3_B* 1e7p_B* 1qlb_B* 2bs4_B*
Probab=98.46 E-value=1.4e-07 Score=105.20 Aligned_cols=69 Identities=22% Similarity=0.371 Sum_probs=59.1
Q ss_pred EEEEEcccCCCCCchHHHHHh---hcCC-CCCcCCCCCCCCCeeEEEECCccCCCCcccccccccchhhHHhcCCcEEEE
Q psy7003 29 VVYIIGAEVPPGTRLVDFIRD---YARL-KGTKYMCREGGCGVCTVTVTSSHPVTGVDSTYSVNACLVLVHMCGGWAITT 104 (1520)
Q Consensus 29 ~~~~~~~~~~~~~~l~~~lr~---~~~l-~g~k~~c~~g~cGactv~~~~~~~~~~~~~~~~v~scl~~~~~~~g~~i~T 104 (1520)
+.+++ ++++++||||.||. +++. .+.+.+|++|.||+|+|.|||. ++.||.+++...+| .++|
T Consensus 24 ~~~~v--~~~~~~tlL~~l~~~~~~~~~~l~~~~~c~~g~Cg~C~v~i~G~----------~~~aC~~~~~~~~g-~~~~ 90 (241)
T 2bs2_B 24 QEYKI--EEAPSMTIFIVLNMIRETYDPDLNFDFVCRAGICGSCGMMINGR----------PSLACRTLTKDFED-GVIT 90 (241)
T ss_dssp EEEEE--ECCTTCBHHHHHHHHHHHTCTTCCCCCSSSSSSSCTTEEEETTE----------EEEGGGCBGGGCTT-SEEE
T ss_pred EEEEE--eCCCCChHHHHHHHhchhcCCCCccCCCCCCCCCCCCEeEECCC----------eecchhCcHhHcCC-CeEE
Confidence 55677 68999999999985 3344 3789999999999999999996 78999999999887 7889
Q ss_pred ecCCCC
Q psy7003 105 VEGLGS 110 (1520)
Q Consensus 105 ~eg~~~ 110 (1520)
||+|.+
T Consensus 91 ie~l~~ 96 (241)
T 2bs2_B 91 LLPLPA 96 (241)
T ss_dssp EECCTT
T ss_pred EecCCC
Confidence 999974
No 41
>2h88_B Succinate dehydrogenase IP subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_B* 1yq3_B* 2fbw_B* 2h89_B* 2wqy_B* 3aef_B* 3abv_B* 3ae1_B* 3ae3_B* 3ae2_B* 3ae5_B* 3ae6_B* 3ae7_B* 3ae8_B* 3ae9_B* 3aea_B* 3aeb_B* 3aec_B* 3aed_B* 3aee_B* ...
Probab=98.45 E-value=9.5e-08 Score=107.53 Aligned_cols=69 Identities=20% Similarity=0.344 Sum_probs=59.8
Q ss_pred EEEEEcccCCC-CCchHHHHHhhc----CCCCCcCCCCCCCCCeeEEEECCccCCCCcccccccccchhhHHhcCCcEEE
Q psy7003 29 VVYIIGAEVPP-GTRLVDFIRDYA----RLKGTKYMCREGGCGVCTVTVTSSHPVTGVDSTYSVNACLVLVHMCGGWAIT 103 (1520)
Q Consensus 29 ~~~~~~~~~~~-~~~l~~~lr~~~----~l~g~k~~c~~g~cGactv~~~~~~~~~~~~~~~~v~scl~~~~~~~g~~i~ 103 (1520)
+.|++ ++++ ++||||+||+.. ...+++.+|++|.||+|+|.|||. .+.||.+++..++|. ++
T Consensus 31 ~~~~v--~~~~~~~tlLd~l~~~~~~~~p~l~~~~~c~~g~Cg~C~v~i~G~----------~~~aC~~~~~~~~g~-~~ 97 (252)
T 2h88_B 31 QTYEV--DLNKCGPMVLDALIKIKNELDSTLTFRRSCREGICGSCAMNIAGG----------NTLACTKKIDPDLSK-TT 97 (252)
T ss_dssp EEEEE--EGGGSCSBHHHHHHHHHHHTCTTCCCCCSCSSSSSCTTEEEETTE----------EEEGGGSBCCCCTTS-CE
T ss_pred EEEEE--ecCCCCChHHHHHHHhCcccCCCccccCCCCCCCCCCCEEEECCc----------EEccccCCHhHcCCC-ce
Confidence 56777 6777 999999999742 257899999999999999999996 789999999998887 88
Q ss_pred EecCCCC
Q psy7003 104 TVEGLGS 110 (1520)
Q Consensus 104 T~eg~~~ 110 (1520)
|||+|.+
T Consensus 98 ~iepl~~ 104 (252)
T 2h88_B 98 KIYPLPH 104 (252)
T ss_dssp EEECSTT
T ss_pred EEecccC
Confidence 9999974
No 42
>1kf6_B Fumarate reductase iron-sulfur protein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.1.2.1 d.15.4.2 PDB: 1kfy_B* 1l0v_B* 2b76_B* 3cir_B* 3p4p_B* 3p4q_B* 3p4r_B* 3p4s_B*
Probab=98.22 E-value=1.4e-06 Score=97.20 Aligned_cols=68 Identities=24% Similarity=0.350 Sum_probs=56.0
Q ss_pred EEEEEcccCCCCCchHHHHHhh----cCCCCCcCCCCCCCCCeeEEEECCccCCCCcccccccccchhhHHhcCCcEEEE
Q psy7003 29 VVYIIGAEVPPGTRLVDFIRDY----ARLKGTKYMCREGGCGVCTVTVTSSHPVTGVDSTYSVNACLVLVHMCGGWAITT 104 (1520)
Q Consensus 29 ~~~~~~~~~~~~~~l~~~lr~~----~~l~g~k~~c~~g~cGactv~~~~~~~~~~~~~~~~v~scl~~~~~~~g~~i~T 104 (1520)
+.+++ ++++++||||+||+. ....+++.+|++|.||+|+|.|||. ++.||.+++....| +.|
T Consensus 24 ~~~~~--~~~~~~tll~al~~~~~~~~p~l~~~~~c~~G~Cg~C~v~v~G~----------~~~aC~~~~~~~~~--~~~ 89 (243)
T 1kf6_B 24 AFYEV--PYDATTSLLDALGYIKDNLAPDLSYRWSCRMAICGSCGMMVNNV----------PKLACKTFLRDYTD--GMK 89 (243)
T ss_dssp EEEEE--EECTTCBHHHHHHHHHHHTCTTCCCCCCCSSSSSCCCEEEETTE----------EEEGGGCBGGGCTT--CEE
T ss_pred EEEEE--ecCCCChHHHHHHHcCcccCCCcccccCCCCCcCCCCEeEECCE----------EEeeeeeEHhhCCC--cEE
Confidence 34566 678999999999974 1234789999999999999999995 79999999988765 578
Q ss_pred ecCCCC
Q psy7003 105 VEGLGS 110 (1520)
Q Consensus 105 ~eg~~~ 110 (1520)
||+|..
T Consensus 90 i~~l~~ 95 (243)
T 1kf6_B 90 VEALAN 95 (243)
T ss_dssp EECCTT
T ss_pred EEecCC
Confidence 998863
No 43
>1l5p_A Ferredoxin; [2Fe-2S] cluster, electron transfer, iron-sulfur protein, metalloprotein, oxidoreductase; 2.20A {Trichomonas vaginalis} SCOP: d.15.4.1
Probab=97.90 E-value=1.3e-05 Score=76.95 Aligned_cols=51 Identities=20% Similarity=0.370 Sum_probs=47.0
Q ss_pred EEEEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCC-CCCCCeeEEEECC
Q psy7003 21 TVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCR-EGGCGVCTVTVTS 74 (1520)
Q Consensus 21 ~~~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~-~g~cGactv~~~~ 74 (1520)
+|+|++||+.+++ +++++++|++.+++. |+.|.+++|+ .|.||+|.|.|.+
T Consensus 2 ~v~i~~~g~~~~~--~~~~g~tll~a~~~~-gi~gi~~~C~G~G~Cg~C~v~v~~ 53 (93)
T 1l5p_A 2 TITAVKGGVKKQL--KFEDDQTLFTVLTEA-GLMSADDTCQGNKACGKCICKHVS 53 (93)
T ss_dssp EEEEEETTEEEEE--ECCTTEEHHHHHHTT-TSSCCTTSCSSSSSSCCCEEEEEE
T ss_pred eEEEEeCCcEEEE--EECCCChHHHHHHHc-CCCcCCcCCCCcCCcCCCEEEECC
Confidence 4789999998888 799999999999986 9999999999 9999999999965
No 44
>2wlb_A ETP1-FD, electron transfer protein 1, mitochondrial; iron-sulfur, iron, transport, ferredoxin, adrenodoxin-like, electron transport; 2.60A {Schizosaccharomyces pombe}
Probab=97.44 E-value=0.00011 Score=71.58 Aligned_cols=52 Identities=23% Similarity=0.418 Sum_probs=45.3
Q ss_pred eEEEEE-ECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCC-CCCCCeeEEEECCc
Q psy7003 20 STVRFT-INGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCR-EGGCGVCTVTVTSS 75 (1520)
Q Consensus 20 ~~~~~~-ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~-~g~cGactv~~~~~ 75 (1520)
.+|+|. .||+.+++ ++++++|||+.+++. |+. .+++|+ .|.||.|.|.|.+-
T Consensus 4 ~~v~~~~~~g~~~~~--~~~~g~tlL~a~~~~-gi~-i~~~C~g~G~Cg~C~v~v~~g 57 (103)
T 2wlb_A 4 IKVFFVTPEGREIMI--EGNEGDSILDLAHAN-NID-LEGACEGSVACSTCHVIVDPE 57 (103)
T ss_dssp EEEEEECTTCCEEEE--EECTTCBHHHHHHHT-TCC-CCCTTTTSSCCSTTEEEECHH
T ss_pred eEEEEEeCCCCEEEE--EECCCCHHHHHHHHc-CCC-cCcCCCCCCCcCCCEEEECCC
Confidence 468898 99977777 688999999999985 888 999999 79999999999763
No 45
>1iue_A Ferredoxin; electron transport, iron-sulfur; 1.70A {Plasmodium falciparum} SCOP: d.15.4.1
Probab=97.44 E-value=0.00014 Score=70.20 Aligned_cols=52 Identities=19% Similarity=0.385 Sum_probs=44.2
Q ss_pred eEEEEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEE-CCc
Q psy7003 20 STVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTV-TSS 75 (1520)
Q Consensus 20 ~~~~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~-~~~ 75 (1520)
.+|+|.+||..+++ ++++++|||+.+++. |+ ..+++|+.|.||.|.|.| +|.
T Consensus 3 ~~v~~~~~~~~~~~--~~~~g~tlL~a~~~~-gi-~i~~~C~~G~Cg~C~v~v~~G~ 55 (98)
T 1iue_A 3 YNITLRTNDGEKKI--ECNEDEYILDASERQ-NV-ELPYSCRGGSCSTCAAKLVEGE 55 (98)
T ss_dssp EEEEEEETTEEEEE--EEETTSCHHHHHHHT-TC-CCCCSSCSSSSSTTEEEEEESC
T ss_pred EEEEEEeCCCeEEE--EeCCCCcHHHHHHHc-CC-CCCCCCCCCcCCCCEEEEeeCC
Confidence 35889999965566 578999999999985 88 699999999999999997 663
No 46
>1a70_A Ferredoxin; iron-sulfur protein, photosynthesis, electron transport; 1.70A {Spinacia oleracea} SCOP: d.15.4.1 PDB: 1pfd_A
Probab=97.44 E-value=0.00014 Score=70.06 Aligned_cols=50 Identities=20% Similarity=0.417 Sum_probs=42.8
Q ss_pred EEEEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEE-CC
Q psy7003 21 TVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTV-TS 74 (1520)
Q Consensus 21 ~~~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~-~~ 74 (1520)
+|+|..++..+++ ++++++|||+.+++. |+. .+++|+.|.||+|.|.| +|
T Consensus 4 ~v~~~~~~~~~~~--~~~~g~tlL~a~~~~-gi~-i~~~C~~G~Cg~C~v~v~~G 54 (97)
T 1a70_A 4 KVTLVTPTGNVEF--QCPDDVYILDAAEEE-GID-LPYSCRAGSCSSCAGKLKTG 54 (97)
T ss_dssp EEEEEETTEEEEE--EEETTSCHHHHHHHT-TCC-CCCSSSSSCSSTTEEEEEES
T ss_pred EEEEEeCCceEEE--EeCCCCcHHHHHHHc-CCC-cccCCCCcCCCCCeEEEccC
Confidence 5888877655566 688999999999985 887 99999999999999998 56
No 47
>1wri_A Ferredoxin II, ferredoxin; electron transport; 1.20A {Equisetum arvense} SCOP: d.15.4.1
Probab=97.43 E-value=0.00018 Score=68.82 Aligned_cols=50 Identities=22% Similarity=0.460 Sum_probs=43.2
Q ss_pred eEEEEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEE-CC
Q psy7003 20 STVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTV-TS 74 (1520)
Q Consensus 20 ~~~~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~-~~ 74 (1520)
.+|+|..+|..+++ ++++++|||+.+++. | ..+++|+.|.||.|.|.| +|
T Consensus 2 ~~V~~~~~~~~~~~--~~~~g~tlL~a~~~~-g--~i~~~C~~G~Cg~C~v~v~~G 52 (93)
T 1wri_A 2 YKVTLKTPDGDITF--DVEPGERLIDIGSEK-A--DLPLSCQAGACSTCLGKIVSG 52 (93)
T ss_dssp EEEEEEETTEEEEE--EECTTSCHHHHHHHH-S--CCCCSSSSSSSSTTEEEEEES
T ss_pred EEEEEEECCCeEEE--EECCCCcHHHHHHHC-c--CCCCCCCCCCCCCCEEEEecC
Confidence 35888888865666 688999999999986 7 899999999999999998 55
No 48
>1jq4_A Methane monooxygenase component C; [2Fe-2S] ferredoxin, oxidoreductase; NMR {Methylococcus capsulatus str} SCOP: d.15.4.2
Probab=97.39 E-value=9.9e-05 Score=71.21 Aligned_cols=51 Identities=20% Similarity=0.335 Sum_probs=43.7
Q ss_pred EEEEEEC---CEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEE-CCc
Q psy7003 21 TVRFTIN---GVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTV-TSS 75 (1520)
Q Consensus 21 ~~~~~in---g~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~-~~~ 75 (1520)
.++++|| |..+++ ++++++|||+.+|+. |+. .+++|+.|.||+|.|.| +|.
T Consensus 4 ~~~v~~~~~~~~~~~~--~~~~g~tlL~a~~~~-gi~-i~~~C~~G~Cg~C~v~v~~G~ 58 (98)
T 1jq4_A 4 VHTITAVTEDGESLRF--ECRSDEDVITAALRQ-NIF-LMSSCREGGCATCKALCSEGD 58 (98)
T ss_dssp EEEEEEEETTTEEEEE--EEESCCTHHHHHHHH-TCC-CCCSCCSSCCCCCCBCEEECC
T ss_pred cEEEEEEecCCCcEEE--EeCCCChHHHHHHHc-CCC-CcCCCCCCCCCCCEEEEEcCc
Confidence 3677888 777777 688999999999985 887 99999999999999988 564
No 49
>1awd_A Ferredoxin; electron transport, eukaryotic, green ALGA, electron transfer, metalloprotein; 1.40A {'chlorella' fusca} SCOP: d.15.4.1
Probab=97.39 E-value=0.00025 Score=67.96 Aligned_cols=51 Identities=27% Similarity=0.488 Sum_probs=42.5
Q ss_pred EEEEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEE-CCc
Q psy7003 21 TVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTV-TSS 75 (1520)
Q Consensus 21 ~~~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~-~~~ 75 (1520)
+|+|..++..+++ ++++++|||+.+++. |+ ..+++|+.|.||.|.|.| +|.
T Consensus 2 ~v~~~~~~g~~~~--~~~~g~tlL~a~~~~-gi-~i~~~C~~G~Cg~C~v~v~~G~ 53 (94)
T 1awd_A 2 KVTLKTPSGEETI--ECPEDTYILDAAEEA-GL-DLPYSCRAGACSSCAGKVESGE 53 (94)
T ss_dssp EEEEEETTEEEEE--ECCTTSCHHHHHHHT-TC-CCCCSSSSSSSSTTEEEEEESC
T ss_pred EEEEEeCCCcEEE--EECCCCcHHHHHHHc-CC-CCCcCCCCCcCCCCEEEEEeCC
Confidence 4788865545566 689999999999985 88 599999999999999998 563
No 50
>1frr_A Ferredoxin I; electron transfer(iron-sulfur protein); 1.80A {Equisetum arvense} SCOP: d.15.4.1
Probab=97.35 E-value=0.00013 Score=69.66 Aligned_cols=78 Identities=22% Similarity=0.397 Sum_probs=54.1
Q ss_pred eEEEEE-ECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEEC-CccCCCCc-------ccccccccc
Q psy7003 20 STVRFT-INGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVT-SSHPVTGV-------DSTYSVNAC 90 (1520)
Q Consensus 20 ~~~~~~-ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~~-~~~~~~~~-------~~~~~v~sc 90 (1520)
.+|+|. .|| .+++ ++++++|||+.+++. |+. ..++|+.|.||.|.|.|. |....... .....+.+|
T Consensus 2 ~~v~~~~~~g-~~~~--~~~~g~tlL~a~~~~-gi~-i~~~C~~G~Cg~C~v~v~~G~~~~~~~~~L~~~~~~~g~~LaC 76 (95)
T 1frr_A 2 YKTVLKTPSG-EFTL--DVPEGTTILDAAEEA-GYD-LPFSCRAGACSSCLGKVVSGSVDESEGSFLDDGQMEEGFVLTC 76 (95)
T ss_dssp EEEEEEETTE-EEEE--EECTTCCHHHHHHHT-TCC-CCCSSSSSSSSTTEEEEEESCEECTTCCSCCHHHHHTTEEETT
T ss_pred eEEEEEeCCC-cEEE--EeCCCCcHHHHHHHc-CCC-CCCCCCCcCCCCCEEEEEeCCccccccccCCHHHHhCCcEEee
Confidence 368886 888 4455 578999999999875 874 899999999999999997 52111100 011247788
Q ss_pred hhhHHhcCCcEEEE
Q psy7003 91 LVLVHMCGGWAITT 104 (1520)
Q Consensus 91 l~~~~~~~g~~i~T 104 (1520)
...+. .+..|.+
T Consensus 77 ~~~~~--~~~~v~~ 88 (95)
T 1frr_A 77 IAIPE--SDLVIET 88 (95)
T ss_dssp TCEES--SCEEEEC
T ss_pred ECEEC--CCEEEEE
Confidence 87754 3555543
No 51
>1frd_A Heterocyst [2Fe-2S] ferredoxin; electron transport; 1.70A {Nostoc SP} SCOP: d.15.4.1
Probab=97.01 E-value=0.00056 Score=65.85 Aligned_cols=51 Identities=22% Similarity=0.427 Sum_probs=41.8
Q ss_pred eEEEEEECC--EEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEE-CC
Q psy7003 20 STVRFTING--VVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTV-TS 74 (1520)
Q Consensus 20 ~~~~~~ing--~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~-~~ 74 (1520)
.+|+|..|+ +..++ ++++++|||+.+++. |+. ..++|+.|.||.|.|.| +|
T Consensus 3 ~~V~~~~~~~~~~~~~--~~~~g~tlL~a~~~~-gi~-i~~~C~~G~Cg~C~v~v~~G 56 (98)
T 1frd_A 3 YQVRLINKKQDIDTTI--EIDEETTILDGAEEN-GIE-LPFSCHSGSCSSCVGKVVEG 56 (98)
T ss_dssp EEEEEEETTTTEEEEE--EEETTSCHHHHHHHT-TCC-CCCSSSSSSSSTTEEEEEES
T ss_pred eEEEEEeCCCCCCEEE--EeCCCCcHHHHHHHc-CCC-cccCCCCCCCCCCEEEEEeC
Confidence 358888854 24456 578999999999875 886 99999999999999998 55
No 52
>3lxf_A Ferredoxin; iron, iron-sulfur, metal-binding, metal protein; 2.30A {Novosphingobium aromaticivorans} SCOP: d.15.4.0
Probab=96.97 E-value=0.00074 Score=66.12 Aligned_cols=81 Identities=20% Similarity=0.384 Sum_probs=59.5
Q ss_pred EEEEE-ECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCC-CCCCCeeEEEECCcc-----CCC----------Cccc
Q psy7003 21 TVRFT-INGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCR-EGGCGVCTVTVTSSH-----PVT----------GVDS 83 (1520)
Q Consensus 21 ~~~~~-ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~-~g~cGactv~~~~~~-----~~~----------~~~~ 83 (1520)
+|+|. .||+.+++ +++++.||++.+++. |+.|..+.|+ .|.||.|.|.|..-. +.+ ....
T Consensus 2 ~vt~~~~~G~~~~~--~~~~g~tll~a~~~~-gi~~i~~~C~G~G~CgtC~v~v~~g~~~~l~~~~~~e~~~L~~~~~~~ 78 (104)
T 3lxf_A 2 AILVTTRDGTRTEI--QAEPGLSLMEALRDA-GIDELLALCGGCCSCATCHVLVAPAFADRLPALSGDENDLLDSSDHRT 78 (104)
T ss_dssp EEEEECTTSCEEEE--ECCTTSBHHHHHHHT-TCTTCCCTTCSSSSCSTTEEEECGGGGGGSCCCCHHHHHHHHTSTTCC
T ss_pred EEEEEeCCCCEEEE--EECCCChHHHHHHHc-CCCCCCcCCCCCCCCCCCEEEECCcccccCCCCCHHHHHHhccccccC
Confidence 36664 58998888 799999999999975 9999999999 899999999886531 111 1222
Q ss_pred ccccccchhhHH-hcCCcEEEE
Q psy7003 84 TYSVNACLVLVH-MCGGWAITT 104 (1520)
Q Consensus 84 ~~~v~scl~~~~-~~~g~~i~T 104 (1520)
.-.+.+|.+.+. .++|..|..
T Consensus 79 ~g~rLaCq~~~~~dl~gl~v~i 100 (104)
T 3lxf_A 79 PHSRLSCQITINDKLEGLEVEI 100 (104)
T ss_dssp TTEEEGGGCBCCGGGTTCEEEE
T ss_pred CCcEEEeeCEEccCCCCEEEEe
Confidence 335778877654 356776653
No 53
>1b9r_A Protein (terpredoxin); structure from molmol, ferredoxin; NMR {Pseudomonas SP} SCOP: d.15.4.1
Probab=96.96 E-value=0.00053 Score=66.92 Aligned_cols=52 Identities=17% Similarity=0.407 Sum_probs=44.2
Q ss_pred EEEE-EECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCC-CCCCCeeEEEECCc
Q psy7003 21 TVRF-TINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCR-EGGCGVCTVTVTSS 75 (1520)
Q Consensus 21 ~~~~-~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~-~g~cGactv~~~~~ 75 (1520)
+|+| ..+|+.+++ ++++++|||+.+++. |+.|..+.|+ .|.||.|.|.|.+-
T Consensus 2 ~V~~~~~~g~~~~~--~~~~g~tlL~aa~~~-gi~~i~~~C~g~G~CgtC~v~v~~G 55 (105)
T 1b9r_A 2 RVVFIDEQSGEYAV--DAQDGQSLMEVATQN-GVPGIVAECGGSCVCATCRIEIEDA 55 (105)
T ss_dssp EEEECCTTTSCEEE--ECCTTCCTTHHHHHH-TCCCCCCSSTTSSCCCCCCCEECTT
T ss_pred EEEEEeCCCCEEEE--EECCCChHHHHHHHc-CCCCcCcCCCCCCCcCcCEEEECCc
Confidence 4777 578966667 688999999999875 9999999998 69999999998764
No 54
>3hui_A Ferredoxin; cytochrome P450, electron transfer, iron, iron-sulfur, metal-binding, electron transport; 2.01A {Rhodopseudomonas palustris}
Probab=96.93 E-value=0.00071 Score=68.68 Aligned_cols=82 Identities=20% Similarity=0.306 Sum_probs=60.4
Q ss_pred ceEEEEE-ECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCC-CCCCCeeEEEECCcc-----CCC----------Cc
Q psy7003 19 SSTVRFT-INGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCR-EGGCGVCTVTVTSSH-----PVT----------GV 81 (1520)
Q Consensus 19 ~~~~~~~-ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~-~g~cGactv~~~~~~-----~~~----------~~ 81 (1520)
+.+|+|. .+|+.+++ +++++++|++.+++. |+.|..+.|+ .|.||.|.|.|..-. +.+ ..
T Consensus 21 M~~Vt~~~~~G~~~~v--~~~~G~tLL~aa~~~-gi~gi~~~C~G~G~CgtC~v~v~~G~~~~l~~~~~~E~~~L~~~~e 97 (126)
T 3hui_A 21 MAKINFVDHTGETRTV--EVEEGATVMEAAIRN-AIPGVEAECGGACACATCHVYVDEAWREKVGGPSPMEEDMLDFGYD 97 (126)
T ss_dssp EEEEEEECTTSCEEEE--EEETTSBHHHHHHTT-TCTTCCCTTSSSSCCSTTEEEECGGGHHHHCCCCHHHHHHHTTSSS
T ss_pred ceEEEEEeCCCCEEEE--EECCCCcHHHHHHHc-CCCCCccCCCCCCCCCCCEEEECCCcccccCCCCHHHhhhcCchhh
Confidence 4468887 88977777 688999999999985 9999999998 899999999986531 111 12
Q ss_pred ccccccccchhhHHh-cCCcEEE
Q psy7003 82 DSTYSVNACLVLVHM-CGGWAIT 103 (1520)
Q Consensus 82 ~~~~~v~scl~~~~~-~~g~~i~ 103 (1520)
...-.+.+|.+.+.. ++|..|.
T Consensus 98 ~~~g~RLaCQ~~~~~dldgl~V~ 120 (126)
T 3hui_A 98 VRPNSRLSCQIKVSNELDGLIVT 120 (126)
T ss_dssp CCTTEEEGGGCBCCGGGTTEEEE
T ss_pred ccCCeEEeeeCEECcCCCcEEEE
Confidence 233457788876543 5666664
No 55
>1xlq_A Putidaredoxin, PDX; [2Fe-2S], ferredoxin, oxidoreductase; 1.45A {Pseudomonas putida} SCOP: d.15.4.1 PDB: 1xlp_A 1oqr_A 1r7s_A 1pdx_A 1yji_A 1yjj_A 1oqq_A 1xln_A 1xlo_A 3lb8_C* 1put_A 1gpx_A
Probab=96.92 E-value=0.00075 Score=65.92 Aligned_cols=52 Identities=19% Similarity=0.358 Sum_probs=44.5
Q ss_pred EEEE-EECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCC-CCCCCeeEEEECCc
Q psy7003 21 TVRF-TINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCR-EGGCGVCTVTVTSS 75 (1520)
Q Consensus 21 ~~~~-~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~-~g~cGactv~~~~~ 75 (1520)
+|+| ..||+.+++ ++++++|||+.+++. |+.|..+.|+ .|.||.|.|.|.+-
T Consensus 2 ~V~~~~~~g~~~~~--~~~~g~tlLeaa~~~-gi~~i~~~C~g~G~CgtC~v~v~~g 55 (106)
T 1xlq_A 2 KVVYVSHDGTRREL--DVADGVSLMQAAVSN-GIYDIVGDCGGSASCATCHVYVNEA 55 (106)
T ss_dssp EEEEECTTSCEEEE--ECCTTCBHHHHHHHT-TCTTSCCTTCSSSSSCTTEEEECTT
T ss_pred EEEEEeCCCCEEEE--EECCCCcHHHHHHHc-CCCCCCcCCCCCcccCcCEEEECCc
Confidence 4778 579977777 689999999999875 9999999995 79999999998654
No 56
>1czp_A Ferredoxin I; [2Fe-2S] protein, crystal reduced with dithionite, electron; 1.17A {Nostoc SP} SCOP: d.15.4.1 PDB: 1ewy_C* 1fxa_A 1qt9_A 1qog_A 1j7c_A 1j7b_A 1qof_A 1qob_A 1j7a_A 1qoa_A 1rfk_A 3p63_A 4fxc_A 3ab5_A 1roe_A 2cjn_A 2cjo_A 1off_A 1dox_A 1doy_A ...
Probab=96.84 E-value=0.00097 Score=64.28 Aligned_cols=50 Identities=22% Similarity=0.452 Sum_probs=40.4
Q ss_pred EEEEEECCE--EEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEE-CC
Q psy7003 21 TVRFTINGV--VYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTV-TS 74 (1520)
Q Consensus 21 ~~~~~ing~--~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~-~~ 74 (1520)
+|+|..++. ..++ ++++++|||+.+++. |+. ..++|+.|.||.|.|.| +|
T Consensus 4 ~V~~~~~~~~~~~~~--~~~~g~tlL~a~~~~-gi~-i~~~C~~G~Cg~C~v~v~~G 56 (98)
T 1czp_A 4 KVTLINEAEGTKHEI--EVPDDEYILDAAEEQ-GYD-LPFSCRAGACSTCAGKLVSG 56 (98)
T ss_dssp EEEEEETTTTEEEEE--EEETTSCHHHHHHHT-TCC-CCCSSSSSSSSTTEEEEEES
T ss_pred EEEEEeCCCCCcEEE--EeCCCCCHHHHHHHc-CCC-ccCCCCCCCCCCCeEEEccC
Confidence 577776432 3455 578999999999875 887 99999999999999997 55
No 57
>1uwm_A Ferredoxin VI, FDVI; electron transport, metal-binding, iron-sulfur, iron, 2Fe-2S; 2.0A {Rhodobacter capsulatus} SCOP: d.15.4.1 PDB: 1e9m_A
Probab=96.81 E-value=0.00091 Score=65.35 Aligned_cols=51 Identities=25% Similarity=0.488 Sum_probs=43.9
Q ss_pred EEEE-EECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCC-CCCCCeeEEEECC
Q psy7003 21 TVRF-TINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCR-EGGCGVCTVTVTS 74 (1520)
Q Consensus 21 ~~~~-~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~-~g~cGactv~~~~ 74 (1520)
+|+| ..||+.+++ ++++++|||+.+++. |+.|..+.|+ .|.||.|.|.|.+
T Consensus 2 ~v~~~~~~g~~~~~--~~~~g~tlL~aa~~~-gi~~i~~~C~g~G~CgtC~v~v~~ 54 (106)
T 1uwm_A 2 KIIFIEHNGTRHEV--EAKPGLTVMEAARDN-GVPGIDADCGGACACSTCHAYVDP 54 (106)
T ss_dssp EEEEECTTCCEEEE--ECCTTSBHHHHHHTT-TCTTCCCTTSSSSSSCTTEEEECH
T ss_pred EEEEEeCCCCEEEE--EECCCCcHHHHHHHc-CCCCcccCCCCCCCcCcCEEEECC
Confidence 4778 578976777 689999999999875 9999999995 7999999999865
No 58
>1i7h_A Ferredoxin; 2Fe-2S,electron transport; 1.70A {Escherichia coli} SCOP: d.15.4.1
Probab=96.77 E-value=0.00077 Score=66.51 Aligned_cols=50 Identities=14% Similarity=0.314 Sum_probs=39.6
Q ss_pred EEEEEEC-C---EEEEEcccCCCCCchHHHHHhhcCCCCCcCCC-CCCCCCeeEEEECC
Q psy7003 21 TVRFTIN-G---VVYIIGAEVPPGTRLVDFIRDYARLKGTKYMC-REGGCGVCTVTVTS 74 (1520)
Q Consensus 21 ~~~~~in-g---~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c-~~g~cGactv~~~~ 74 (1520)
+|+|..| | ...++ ++++++|||+.+++. |+. ..++| +.|.||.|.|.|..
T Consensus 3 ~i~~~~~~g~~~~~~~~--~~~~g~tlL~a~~~~-gi~-i~~~C~~~G~Cg~C~v~v~~ 57 (111)
T 1i7h_A 3 KIVILPHQDLCPDGAVL--EANSGETILDAALRN-GIE-IEHACEKSCACTTCHCIVRE 57 (111)
T ss_dssp EEEECCBTTTBTTCEEE--ECCTTCBHHHHHHHT-TCC-CCCTTSSSSCCSTTEEEEEE
T ss_pred EEEEEeCCCcCCCCeEE--EeCCCCcHHHHHHHc-CCC-CcccCCCCCcCCCCEEEEcc
Confidence 5888873 2 22344 478999999999986 886 99999 58999999999863
No 59
>2bt6_A Adrenodoxin 1; ruthenium(II) bipyridyl complex, intramolecular electron TRA electron transport, metal-binding; HET: RUA; 1.50A {Bos taurus} SCOP: d.15.4.1 PDB: 1ayf_A 3n9y_C* 2jqr_B* 3na0_C*
Probab=96.49 E-value=0.0025 Score=62.42 Aligned_cols=79 Identities=18% Similarity=0.274 Sum_probs=53.6
Q ss_pred eEEEEE-ECCEEEEEcccCCCCCchHHHHHhhcCCCCCc--CCCCC-CCCCeeEEEECCc-----cCCC----------C
Q psy7003 20 STVRFT-INGVVYIIGAEVPPGTRLVDFIRDYARLKGTK--YMCRE-GGCGVCTVTVTSS-----HPVT----------G 80 (1520)
Q Consensus 20 ~~~~~~-ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k--~~c~~-g~cGactv~~~~~-----~~~~----------~ 80 (1520)
.+|+|. -+|+.+++ +++++++|++.+++. |+. .. +.|+. |.||.|.|.|..- .+.+ .
T Consensus 7 ~~V~~~~~~g~~~~v--~~~~g~tLL~aa~~~-gi~-i~~~~~Cgg~G~CgtC~v~v~~g~~~~l~~~~~~E~~~L~~~~ 82 (108)
T 2bt6_A 7 ITVHFINRDGETLTT--KGKIGDSLLDVVVQN-NLD-IDGFGACEGTLACSTCHLIFEQHIFEKLEAITDEENDMLDLAY 82 (108)
T ss_dssp EEEEEECTTSCEEEE--EEETTCBHHHHHHHT-TCC-CTTTTTTSSSSSBSTTEEECCHHHHTTSCCCCHHHHHHHTTCT
T ss_pred EEEEEECCCCCEEEE--EECCCChHHHHHHHc-CCC-CCcccCCCCCcCcCCCEEEECccccccCCCCCHHHHHHHhCcc
Confidence 346665 47988787 688999999999874 654 66 99987 9999999999732 1211 1
Q ss_pred cccccccccchhhHHh-cCCcEE
Q psy7003 81 VDSTYSVNACLVLVHM-CGGWAI 102 (1520)
Q Consensus 81 ~~~~~~v~scl~~~~~-~~g~~i 102 (1520)
......+.||.+.+.. ++|..|
T Consensus 83 ~~~~g~rLaCq~~~~~d~d~~~V 105 (108)
T 2bt6_A 83 GLTDRSRLGCQICLTKAMDNMTV 105 (108)
T ss_dssp TCCTTEEEGGGCBCCGGGTTEEE
T ss_pred cCCCCcEeeEEEEecCCCCCEEE
Confidence 1223356788876543 445544
No 60
>2y5c_A Adrenodoxin-like protein, mitochondrial; electron transport, iron-sulfur cluster biogenesis; 1.70A {Homo sapiens}
Probab=95.69 E-value=0.0088 Score=58.72 Aligned_cols=80 Identities=18% Similarity=0.271 Sum_probs=55.4
Q ss_pred eEEEEE-ECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCC-CCCCeeEEEECCc-----cCCC----------Ccc
Q psy7003 20 STVRFT-INGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCRE-GGCGVCTVTVTSS-----HPVT----------GVD 82 (1520)
Q Consensus 20 ~~~~~~-ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~-g~cGactv~~~~~-----~~~~----------~~~ 82 (1520)
.+|+|. -||+.+++ +++++.+||+.+++. |+. ..+.|+. |.||.|.|.|..- .+.+ ...
T Consensus 6 ~~v~~~~~~g~~~~~--~~~~g~tlL~aa~~~-gi~-i~~~C~g~G~CgtC~v~v~~g~~~~l~~~~~~E~~~L~~~~~~ 81 (109)
T 2y5c_A 6 VNVVFVDRSGQRIPV--SGRVGDNVLHLAQRH-GVD-LEGACEASLACSTCHVYVSEDHLDLLPPPEEREDDMLDMAPLL 81 (109)
T ss_dssp EEEEEECTTSCEEEE--EEETTCBHHHHHHHT-TCC-CCCTTSSSSSCCTTEEEECHHHHTTSCCCCHHHHHHHHTSTTC
T ss_pred EEEEEEcCCCCEEEE--EECCCCcHHHHHHHc-CCC-CCcCCCCCcCcCccEEEECCcchhhcCCCCHHHHHHHhccccC
Confidence 346663 48998777 688999999999875 775 7899988 9999999998542 1111 122
Q ss_pred cccccccchhhHHh-cCCcEEE
Q psy7003 83 STYSVNACLVLVHM-CGGWAIT 103 (1520)
Q Consensus 83 ~~~~v~scl~~~~~-~~g~~i~ 103 (1520)
....+.+|.+.+.. ++|..|.
T Consensus 82 ~~g~rLaCq~~~~~d~~~~~v~ 103 (109)
T 2y5c_A 82 QENSRLGCQIVLTPELEGAEFT 103 (109)
T ss_dssp CTTEEEGGGCBCCGGGTTCEEE
T ss_pred CCCcEeeEEeEEecCCCeEEEE
Confidence 23356788876543 4566664
No 61
>1doi_A 2Fe-2S ferredoxin; halophilic protein, redox protein, iron-sulfur, electron transport; 1.90A {Haloarcula marismortui} SCOP: d.15.4.1 PDB: 1e0z_A* 1e10_A
Probab=95.50 E-value=0.0061 Score=61.97 Aligned_cols=50 Identities=20% Similarity=0.399 Sum_probs=40.9
Q ss_pred eEEEEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEE-CC
Q psy7003 20 STVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTV-TS 74 (1520)
Q Consensus 20 ~~~~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~-~~ 74 (1520)
..+++++||+. ++ ++++++|||+.+++. |+. ..++|+.|.||.|.|.| +|
T Consensus 28 ~~i~i~~~g~~-~v--~v~~g~tlL~aa~~~-Gi~-i~~~C~~G~CgtC~v~v~~G 78 (128)
T 1doi_A 28 SDMDLDDEDYG-SL--EVNEGEYILEAAEAQ-GYD-WPFSCRAGACANCAAIVLEG 78 (128)
T ss_dssp HHSCCCTTTEE-EE--ECCTTSCHHHHHHHT-TCC-CCCSSSSSSSSTTEEEEEES
T ss_pred cEEEEEeCCcE-EE--EECCCCcHHHHHHHc-CCC-CccCCCccCCCCCEeEEecC
Confidence 34678899962 44 478999999999875 875 89999999999999988 44
No 62
>3i9v_3 NADH-quinone oxidoreductase subunit 3; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_3* 2fug_3* 3iam_3* 3ias_3* 3m9s_3*
Probab=95.29 E-value=0.0089 Score=77.40 Aligned_cols=106 Identities=21% Similarity=0.391 Sum_probs=69.7
Q ss_pred EEEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCC------CCCCCCeeEEEECCccCC---------CCcc----
Q psy7003 22 VRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMC------REGGCGVCTVTVTSSHPV---------TGVD---- 82 (1520)
Q Consensus 22 ~~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c------~~g~cGactv~~~~~~~~---------~~~~---- 82 (1520)
++|+|||+.++ +++++|||+.++.. |.. .-.-| ..|.|+.|.|.|++.... .|+.
T Consensus 2 v~i~idg~~~~----v~~g~til~a~~~~-gi~-ip~~C~~~~~~~~G~C~~C~V~v~~~~~~~~g~~~~~~~G~~~~~~ 75 (783)
T 3i9v_3 2 VRVKVNDRIVE----VPPGTSVMDAVFHA-GYD-VPLFCSEKHLSPIGACRMCLVRIGLPKKGPDGKPLLNEKGEPEIQW 75 (783)
T ss_dssp EEEECSSCEEE----ECTTCBHHHHHHHT-TCC-CCCSSCCTTSCCCCCSCCSEEEEECC-----------------CCB
T ss_pred eEEEECCEEEE----eCCCChHHHHHHHh-CCC-ccccCCCCCCCCCcccCCcEEEeccccccccccccccccccccccc
Confidence 78999999765 56999999999863 644 23345 889999999999752111 1111
Q ss_pred cccccccchhhHHhcCCcEEEEecCCCCCCCCCCHHHHHHHHhCCCCCCCCchhH
Q psy7003 83 STYSVNACLVLVHMCGGWAITTVEGLGSKKKGYHNVQTRLATMNGSQCGYCSPGM 137 (1520)
Q Consensus 83 ~~~~v~scl~~~~~~~g~~i~T~eg~~~~~~~~h~vq~~~~~~~~~qcg~ctpg~ 137 (1520)
.-..+.||.+++. +|..|.|-..-- .+.-..+-+-|...|-.-|..|..|=
T Consensus 76 ~~~~~~aC~t~v~--~gm~v~t~~~~~--~~~r~~~le~ll~nhp~dC~~C~~~g 126 (783)
T 3i9v_3 76 QPKLAASCVTAVA--DGMVVDTLSDVV--REAQAGMVEFTLLNHPLDCPTCDKGG 126 (783)
T ss_dssp CSSCEETTTCBCC--SSEEEESSSHHH--HHHHHHHHHHHHTSCCCCTTTCTTGG
T ss_pred CCCcccccCCCCC--CCCEEEECCHHH--HHHHHHHHHHHHhcCCCCCccCCCCC
Confidence 1247889999985 799998731100 00112244556667888899998763
No 63
>1l5p_A Ferredoxin; [2Fe-2S] cluster, electron transfer, iron-sulfur protein, metalloprotein, oxidoreductase; 2.20A {Trichomonas vaginalis} SCOP: d.15.4.1
Probab=94.97 E-value=0.029 Score=53.56 Aligned_cols=51 Identities=20% Similarity=0.370 Sum_probs=43.1
Q ss_pred ceEEEECCEEEEecccCCCCcchhHHHHhhhcccCcccccc-CCCccceeeeecc
Q psy7003 297 TVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCR-EGGCGVCTVTVTS 350 (1520)
Q Consensus 297 ~~~f~~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~-~g~cGactV~v~~ 350 (1520)
.++|.+||+...+ +++++.||++.|++. ++.|.+..|. .|.||.|.|.|..
T Consensus 2 ~v~i~~~g~~~~~--~~~~g~tll~a~~~~-gi~gi~~~C~G~G~Cg~C~v~v~~ 53 (93)
T 1l5p_A 2 TITAVKGGVKKQL--KFEDDQTLFTVLTEA-GLMSADDTCQGNKACGKCICKHVS 53 (93)
T ss_dssp EEEEEETTEEEEE--ECCTTEEHHHHHHTT-TSSCCTTSCSSSSSSCCCEEEEEE
T ss_pred eEEEEeCCcEEEE--EECCCChHHHHHHHc-CCCcCCcCCCCcCCcCCCEEEECC
Confidence 4678999997766 578999999999975 8888888999 8999999988743
No 64
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=94.65 E-value=0.025 Score=65.57 Aligned_cols=49 Identities=27% Similarity=0.543 Sum_probs=39.4
Q ss_pred EEEEEC---CEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEE-CC
Q psy7003 22 VRFTIN---GVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTV-TS 74 (1520)
Q Consensus 22 ~~~~in---g~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~-~~ 74 (1520)
.+++|+ |..+++ ++++++|||+.+++. |+. ..+.|+.|.||.|.|.| +|
T Consensus 4 ~~v~~~~~~~~~~~~--~~~~g~tll~a~~~~-gi~-i~~~C~~g~Cg~C~v~v~~G 56 (338)
T 1krh_A 4 HQVALQFEDGVTRFI--CIAQGETLSDAAYRQ-QIN-IPMDCREGECGTCRAFCESG 56 (338)
T ss_dssp EEEEEECTTSCEEEE--EECTTCCHHHHHHHT-TCC-CSCSCSSSSSCTTEEEEEEC
T ss_pred eEEEEEEcCCCcEEE--EeCCCCcHHHHHHHc-CCC-cccCCCCcCCCCCEEEEecC
Confidence 344555 666666 578999999999875 775 88999999999999988 45
No 65
>3ah7_A [2Fe-2S]ferredoxin; [2Fe-2S] cluster, iron-sulfur cluster biosynthes pseudomonas, metal binding protein; 1.90A {Pseudomonas putida}
Probab=94.42 E-value=0.045 Score=53.91 Aligned_cols=36 Identities=28% Similarity=0.647 Sum_probs=31.2
Q ss_pred cCCCCCchHHHHHhhcCCCCCcCCCC-CCCCCeeEEEEC
Q psy7003 36 EVPPGTRLVDFIRDYARLKGTKYMCR-EGGCGVCTVTVT 73 (1520)
Q Consensus 36 ~~~~~~~l~~~lr~~~~l~g~k~~c~-~g~cGactv~~~ 73 (1520)
++++++|||+.+++. |+. ..+.|+ .|.||.|.|.|.
T Consensus 20 ~~~~g~tlL~aa~~~-Gi~-i~~~C~g~G~CgtC~v~v~ 56 (113)
T 3ah7_A 20 EVKPGTNILELAHDH-HIE-MESACGGVKACTTCHCIVR 56 (113)
T ss_dssp ECCTTCBHHHHHHHT-TCC-CCCTTCSSSSCSTTEEEEE
T ss_pred EECCCCcHHHHHHHc-CCC-CCcCCCCCCCcCCCEEEEc
Confidence 478999999999875 775 889998 699999999885
No 66
>3n9z_C Adrenodoxin; cytochrome P450, 22-hydroxycholesterol, cholesterol SIDE CHA cleavage, structural genomics; HET: HEM HC9; 2.17A {Homo sapiens} SCOP: d.15.4.1 PDB: 3na1_C* 3p1m_A* 1l6u_A 1l6v_A 1e6e_B* 1cje_A
Probab=93.73 E-value=0.013 Score=59.25 Aligned_cols=83 Identities=17% Similarity=0.284 Sum_probs=15.5
Q ss_pred CceEEEEE-ECCEEEEEcccCCCCCchHHHHHhhcCCCCCc--CCCC-CCCCCeeEEEECC--cc---CCCC--------
Q psy7003 18 TSSTVRFT-INGVVYIIGAEVPPGTRLVDFIRDYARLKGTK--YMCR-EGGCGVCTVTVTS--SH---PVTG-------- 80 (1520)
Q Consensus 18 ~~~~~~~~-ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k--~~c~-~g~cGactv~~~~--~~---~~~~-------- 80 (1520)
.+.+|+|. -+|+.+++ +++++++|++.+++. |+. .. ..|+ .|.||.|-|.|.. .+ +.+.
T Consensus 4 ~~v~Vtf~~~~G~~~~v--~~~~G~tLl~aa~~~-gi~-i~g~~~CgG~g~CgtC~v~v~~~~~~~l~~~~~~E~~~L~~ 79 (123)
T 3n9z_C 4 DKITVHFINRDGETLTT--KGKVGDSLLDVVVEN-NLD-IDGFGACEGTLACSTCHLIFEDHIYEKLDAITDEENDMLDL 79 (123)
T ss_dssp -------------------------------------------CTTCSSSSCSTTBC--------------CHHHHHHCC
T ss_pred CcEEEEEEeCCCCEEEE--EECCCCcHHHHHHHc-CCC-CCcCCCCCCCCEeCCCeeEEeccccccCCCCChHHHhhhcc
Confidence 34457775 58988888 789999999999874 665 45 7898 7999999998863 21 1111
Q ss_pred --cccccccccchhhHHh-cCCcEEEE
Q psy7003 81 --VDSTYSVNACLVLVHM-CGGWAITT 104 (1520)
Q Consensus 81 --~~~~~~v~scl~~~~~-~~g~~i~T 104 (1520)
.....+..||.+.+.. ++|..|..
T Consensus 80 ~~~~~~~~RLaCQ~~v~~~ld~l~V~i 106 (123)
T 3n9z_C 80 AYGLTDRSRLGCQICLTKSMDNMTVRV 106 (123)
T ss_dssp --------CBCC---------------
T ss_pred cccccCCeEEeeEeEEccCCCCEEEEE
Confidence 1223467888887664 45666654
No 67
>2pia_A Phthalate dioxygenase reductase; HET: FMN; 2.00A {Burkholderia cepacia} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=93.13 E-value=0.054 Score=62.53 Aligned_cols=48 Identities=19% Similarity=0.533 Sum_probs=37.5
Q ss_pred EEEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEEC
Q psy7003 22 VRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVT 73 (1520)
Q Consensus 22 ~~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~~ 73 (1520)
.++++.+...++ ++++++||||.+++. |+. ..++|+.|.||.|.|.|-
T Consensus 238 ~~v~~~~~~~~~--~~~~~~~ll~a~~~~-g~~-~~~~C~~G~Cg~C~~~v~ 285 (321)
T 2pia_A 238 FTVRLSRSGTSF--EIPANRSILEVLRDA-NVR-VPSSCESGTCGSCKTALC 285 (321)
T ss_dssp EEEEETTTCCEE--EECTTSCHHHHHHHT-TCC-CCCSCSSSSSCTTEEEEE
T ss_pred EEEEEeCCCeEE--EECCCCcHHHHHHHc-CCC-CCCCCCCCCCCCCEEEEe
Confidence 555565444455 467999999999874 876 899999999999999774
No 68
>1jq4_A Methane monooxygenase component C; [2Fe-2S] ferredoxin, oxidoreductase; NMR {Methylococcus capsulatus str} SCOP: d.15.4.2
Probab=93.05 E-value=0.076 Score=50.94 Aligned_cols=50 Identities=20% Similarity=0.355 Sum_probs=39.3
Q ss_pred cceEEEEC---CEEEEecccCCCCcchhHHHHhhhcccCccccccCCCccceeeeec
Q psy7003 296 STVRFTIN---GVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVT 349 (1520)
Q Consensus 296 ~~~~f~~n---g~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~~g~cGactV~v~ 349 (1520)
.+++++++ +....+ +++++.||++.|++ +|+. .+..|..|.||.|.|.|.
T Consensus 3 ~~~~v~~~~~~~~~~~~--~~~~g~tlL~a~~~-~gi~-i~~~C~~G~Cg~C~v~v~ 55 (98)
T 1jq4_A 3 RVHTITAVTEDGESLRF--ECRSDEDVITAALR-QNIF-LMSSCREGGCATCKALCS 55 (98)
T ss_dssp CEEEEEEEETTTEEEEE--EEESCCTHHHHHHH-HTCC-CCCSCCSSCCCCCCBCEE
T ss_pred CcEEEEEEecCCCcEEE--EeCCCChHHHHHHH-cCCC-CcCCCCCCCCCCCEEEEE
Confidence 35677777 766666 46789999999987 4665 677899999999998873
No 69
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=92.43 E-value=0.14 Score=62.42 Aligned_cols=73 Identities=16% Similarity=0.109 Sum_probs=52.0
Q ss_pred ceEEEEEECCEEEEEcccCCCCCchHHHHHhhcCCCC----CcCCCCCCC--CCeeEEEECCccCCCCcccccccccchh
Q psy7003 19 SSTVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKG----TKYMCREGG--CGVCTVTVTSSHPVTGVDSTYSVNACLV 92 (1520)
Q Consensus 19 ~~~~~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g----~k~~c~~g~--cGactv~~~~~~~~~~~~~~~~v~scl~ 92 (1520)
+.+++|++||+.++. .+++||++.|+.. |..- .++ =..|. ||.|.|.|+|. ..+++|.+
T Consensus 13 ~~~v~~~~dg~~~~~----~~g~ti~~a~~~~-g~~~~~~~~~~-~p~g~~~~~~c~v~v~g~---------~~~~ac~~ 77 (493)
T 1y56_A 13 GKKVTIYFEGKELEA----YEGEKLPVALLAN-EIYWLTTSNEG-RKRGAFTFGPVPMTVNGV---------KGLEARRI 77 (493)
T ss_dssp SCEEEEEETTEEEEE----ETTCBHHHHHHHT-TCCCCEECTTS-CEECSSSSSCCEEBSSSC---------TTEEGGGC
T ss_pred CCeEEEEECCEEEEe----cCCCHHHHHHHHC-CCceecCCCCC-CCCccccceEEEEEECCE---------ecccceeE
Confidence 346999999998765 5899999999753 4321 222 11244 88999999985 14899999
Q ss_pred hHHhcCCcEEEEecCC
Q psy7003 93 LVHMCGGWAITTVEGL 108 (1520)
Q Consensus 93 ~~~~~~g~~i~T~eg~ 108 (1520)
++ .+|..+.|-.+.
T Consensus 78 ~v--~~Gm~v~t~~~~ 91 (493)
T 1y56_A 78 KV--KDGMKIERQGYY 91 (493)
T ss_dssp BC--CTTCEEBCCCTT
T ss_pred Ec--ccCcEEecccCC
Confidence 86 478888775443
No 70
>1iue_A Ferredoxin; electron transport, iron-sulfur; 1.70A {Plasmodium falciparum} SCOP: d.15.4.1
Probab=91.89 E-value=0.16 Score=48.81 Aligned_cols=49 Identities=20% Similarity=0.418 Sum_probs=38.7
Q ss_pred ceEEEECCEEEEecccCCCCcchhHHHHhhhcccCccccccCCCccceeeeec
Q psy7003 297 TVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVT 349 (1520)
Q Consensus 297 ~~~f~~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~~g~cGactV~v~ 349 (1520)
.++|..+|....+ +++++.||++.|++. |+ ..+..|..|.||.|.|.|.
T Consensus 4 ~v~~~~~~~~~~~--~~~~g~tlL~a~~~~-gi-~i~~~C~~G~Cg~C~v~v~ 52 (98)
T 1iue_A 4 NITLRTNDGEKKI--ECNEDEYILDASERQ-NV-ELPYSCRGGSCSTCAAKLV 52 (98)
T ss_dssp EEEEEETTEEEEE--EEETTSCHHHHHHHT-TC-CCCCSSCSSSSSTTEEEEE
T ss_pred EEEEEeCCCeEEE--EeCCCCcHHHHHHHc-CC-CCCCCCCCCcCCCCEEEEe
Confidence 5788888854444 467899999999974 55 4677899999999998873
No 71
>1wri_A Ferredoxin II, ferredoxin; electron transport; 1.20A {Equisetum arvense} SCOP: d.15.4.1
Probab=91.49 E-value=0.22 Score=47.36 Aligned_cols=48 Identities=23% Similarity=0.479 Sum_probs=38.1
Q ss_pred ceEEEECCEEEEecccCCCCcchhHHHHhhhcccCccccccCCCccceeeeec
Q psy7003 297 TVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVT 349 (1520)
Q Consensus 297 ~~~f~~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~~g~cGactV~v~ 349 (1520)
.++|..++....+ +++++.||++.|++. | ..+..|..|.||.|.|.|.
T Consensus 3 ~V~~~~~~~~~~~--~~~~g~tlL~a~~~~-g--~i~~~C~~G~Cg~C~v~v~ 50 (93)
T 1wri_A 3 KVTLKTPDGDITF--DVEPGERLIDIGSEK-A--DLPLSCQAGACSTCLGKIV 50 (93)
T ss_dssp EEEEEETTEEEEE--EECTTSCHHHHHHHH-S--CCCCSSSSSSSSTTEEEEE
T ss_pred EEEEEECCCeEEE--EECCCCcHHHHHHHC-c--CCCCCCCCCCCCCCEEEEe
Confidence 5778777754444 468899999999976 4 6778999999999998873
No 72
>2wlb_A ETP1-FD, electron transfer protein 1, mitochondrial; iron-sulfur, iron, transport, ferredoxin, adrenodoxin-like, electron transport; 2.60A {Schizosaccharomyces pombe}
Probab=91.27 E-value=0.17 Score=49.00 Aligned_cols=51 Identities=24% Similarity=0.425 Sum_probs=39.4
Q ss_pred cceEEE-ECCEEEEecccCCCCcchhHHHHhhhcccCcccccc-CCCccceeeeecc
Q psy7003 296 STVRFT-INGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCR-EGGCGVCTVTVTS 350 (1520)
Q Consensus 296 ~~~~f~-~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~-~g~cGactV~v~~ 350 (1520)
..++|. .||+...+ +++++.||++.|++. ++. .+..|. .|.||.|.|.|.+
T Consensus 4 ~~v~~~~~~g~~~~~--~~~~g~tlL~a~~~~-gi~-i~~~C~g~G~Cg~C~v~v~~ 56 (103)
T 2wlb_A 4 IKVFFVTPEGREIMI--EGNEGDSILDLAHAN-NID-LEGACEGSVACSTCHVIVDP 56 (103)
T ss_dssp EEEEEECTTCCEEEE--EECTTCBHHHHHHHT-TCC-CCCTTTTSSCCSTTEEEECH
T ss_pred eEEEEEeCCCCEEEE--EECCCCHHHHHHHHc-CCC-cCcCCCCCCCcCCCEEEECC
Confidence 357787 78865555 467899999999974 665 677898 6899999988743
No 73
>1a70_A Ferredoxin; iron-sulfur protein, photosynthesis, electron transport; 1.70A {Spinacia oleracea} SCOP: d.15.4.1 PDB: 1pfd_A
Probab=91.24 E-value=0.21 Score=47.88 Aligned_cols=49 Identities=18% Similarity=0.425 Sum_probs=37.8
Q ss_pred ceEEEECCEEEEecccCCCCcchhHHHHhhhcccCccccccCCCccceeeeec
Q psy7003 297 TVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVT 349 (1520)
Q Consensus 297 ~~~f~~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~~g~cGactV~v~ 349 (1520)
.++|..++....+ +++++.||++.|++ .|+. .+..|..|.||.|.|.|.
T Consensus 4 ~v~~~~~~~~~~~--~~~~g~tlL~a~~~-~gi~-i~~~C~~G~Cg~C~v~v~ 52 (97)
T 1a70_A 4 KVTLVTPTGNVEF--QCPDDVYILDAAEE-EGID-LPYSCRAGSCSSCAGKLK 52 (97)
T ss_dssp EEEEEETTEEEEE--EEETTSCHHHHHHH-TTCC-CCCSSSSSCSSTTEEEEE
T ss_pred EEEEEeCCceEEE--EeCCCCcHHHHHHH-cCCC-cccCCCCcCCCCCeEEEc
Confidence 4777766654444 46789999999997 4665 677899999999999873
No 74
>2wdq_B Succinate dehydrogenase iron-sulfur subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_B* 2acz_B* 1nek_B* 2wdr_B* 2wdv_B* 2ws3_B* 2wu2_B* 2wu5_B* 2wp9_B*
Probab=91.01 E-value=0.16 Score=56.16 Aligned_cols=39 Identities=23% Similarity=0.366 Sum_probs=34.3
Q ss_pred cCCC--CcchhHHHHhhh---cccCccccccCCCccceeeeecc
Q psy7003 312 EVPP--GTRLVDFIRDYA---RLKGTKYMCREGGCGVCTVTVTS 350 (1520)
Q Consensus 312 ~~~~--~~tll~~Lr~~~---~l~gtk~~C~~g~cGactV~v~~ 350 (1520)
++++ ++|||+.||... ...+.+.+|..|.||+|+|.|..
T Consensus 26 ~~~~~~~~tll~~l~~~~~~~~~l~~~~~C~~g~Cg~C~v~v~G 69 (238)
T 2wdq_B 26 EADEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSDGLNMNG 69 (238)
T ss_dssp ECCTTCCCBHHHHHHHHHHHCTTCCCCCSSSSSSSCTTEEEETT
T ss_pred ecCCCCCChHHHHHHHhcccCCCccccccCCCCCCCCCEEEECC
Confidence 5677 999999999977 67888999999999999999943
No 75
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=90.82 E-value=0.095 Score=61.50 Aligned_cols=104 Identities=12% Similarity=0.161 Sum_probs=68.3
Q ss_pred cEEEEcCCHHHHHHHHhcCC-CCCCcEEEEecchhhhccCCCCCCeeeeCCCcccccceEEeC-CeEEEccccCHHHHHH
Q psy7003 516 GIWYIVTEVREIFEIFDGLE-ANQTYMLVGGNTGYGVYRPRVPVDVYIQIRDIKELRQIFTRN-GYVLMGSATTLTEAMD 593 (1520)
Q Consensus 516 ~~~~rPtSLeEal~ll~~~p-~~~~a~lVAGGTdLgv~~k~~~~~~lIdIs~I~EL~~I~~~~-~~L~IGA~vTlsel~e 593 (1520)
..++.|+|.+|+.++++... .+-...+++|||++.+... ....+|+++ +.++..+..++ ..+++||++++.++.+
T Consensus 16 ~~~v~p~s~eel~~~l~~a~~~~~pv~vlGgGSnll~~d~--~~GvVI~l~-~~~i~~i~~~~~~~v~vgAG~~~~~l~~ 92 (340)
T 1uxy_A 16 QHIVCAEDEQQLLNAWQYATAEGQPVLILGEGSNVLFLED--YRGTVIINR-IKGIEIHDEPDAWYLHVGAGENWHRLVK 92 (340)
T ss_dssp EEEEEESSHHHHHHHHHHHHHTTCCEEEESSCTTEEECSC--EEEEEEEEC-CCCEEEEECSSEEEEEEETTSBHHHHHH
T ss_pred cEEEEeCCHHHHHHHHHHHHHcCCCEEEECCCcCCcccCC--CCeEEEEcc-CCCcEEEecCCCeEEEEecCCCHHHHHH
Confidence 45789999999998876321 0124788999999877532 126788885 55555444444 4799999999999998
Q ss_pred hhhhccCCchhhhhHHHHHHHHHhhcchhHhccc
Q psy7003 594 YFDRTSKTDANFEYMRIMKDHLEQVAHYAVRNFA 627 (1520)
Q Consensus 594 ~L~~~~~~~~~~~~~~~La~al~~IAs~qIRN~A 627 (1520)
.+.+.--. ..+.+..+. ..+++..++|.|
T Consensus 93 ~~~~~Gl~--Gle~~~gIP---GtVGGa~~~NaG 121 (340)
T 1uxy_A 93 YTLQEGMP--GLENLALIP---GCVGSSPIQNIG 121 (340)
T ss_dssp HHHHTTCC--SCGGGTTCC---SBGGGTTTTTCE
T ss_pred HHHHCCCC--ccccccCCc---cchhHHHHhccc
Confidence 76543111 011111111 468888888988
No 76
>1awd_A Ferredoxin; electron transport, eukaryotic, green ALGA, electron transfer, metalloprotein; 1.40A {'chlorella' fusca} SCOP: d.15.4.1
Probab=90.22 E-value=0.39 Score=45.65 Aligned_cols=49 Identities=29% Similarity=0.493 Sum_probs=37.3
Q ss_pred ceEEEECCEEEEecccCCCCcchhHHHHhhhcccCccccccCCCccceeeeec
Q psy7003 297 TVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVT 349 (1520)
Q Consensus 297 ~~~f~~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~~g~cGactV~v~ 349 (1520)
.++|..++....+ +++++.||++.|++. |+ ..+..|..|.||.|.|.|.
T Consensus 2 ~v~~~~~~g~~~~--~~~~g~tlL~a~~~~-gi-~i~~~C~~G~Cg~C~v~v~ 50 (94)
T 1awd_A 2 KVTLKTPSGEETI--ECPEDTYILDAAEEA-GL-DLPYSCRAGACSSCAGKVE 50 (94)
T ss_dssp EEEEEETTEEEEE--ECCTTSCHHHHHHHT-TC-CCCCSSSSSSSSTTEEEEE
T ss_pred EEEEEeCCCcEEE--EECCCCcHHHHHHHc-CC-CCCcCCCCCcCCCCEEEEE
Confidence 4677765543444 578999999999974 55 4677899999999999873
No 77
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=89.50 E-value=0.32 Score=61.29 Aligned_cols=50 Identities=24% Similarity=0.424 Sum_probs=41.2
Q ss_pred ceEEEEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCC-CCCCCeeEEEECC
Q psy7003 19 SSTVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCR-EGGCGVCTVTVTS 74 (1520)
Q Consensus 19 ~~~~~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~-~g~cGactv~~~~ 74 (1520)
+.+|+|.-+|+.++ +++++|||+.+++. |+. ..++|+ .|.||.|.|.|..
T Consensus 3 m~~V~~~~sg~~v~----v~~G~tLLeAa~~a-Gi~-ip~~C~G~G~CGtC~v~V~~ 53 (631)
T 3zyy_X 3 EYKVLFKPDQKEVA----ISENTNLMEALNLA-GIN-IKTVCGGAGTCGKCLVRVVD 53 (631)
T ss_dssp CEEEEEETTTEEEE----ECTTSCHHHHHHHH-TCC-CCCSCCCSSCCSTTEEEEEE
T ss_pred ceEEEEecCCeEEE----ECCCCcHHHHHHHc-CCC-CCcCCCCCCcCCCCEEEEee
Confidence 45688888887654 56999999999875 874 899999 8999999998743
No 78
>1rm6_A 4-hydroxybenzoyl-COA reductase alpha subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.41.1.1 d.133.1.1 PDB: 1sb3_A*
Probab=88.25 E-value=3.7 Score=53.11 Aligned_cols=91 Identities=19% Similarity=0.202 Sum_probs=60.8
Q ss_pred ceeeeCCC-CcEEEEEEEEEEecCCCcccch--------hhhHhh-----------c---ccCCCCCCCCce----EEEE
Q psy7003 1148 YKCGVDKN-GVIQNLSTVFNVDKGMTLNENG--------FLHVRF-----------G---LGQASIYDPSTF----RVVA 1200 (1520)
Q Consensus 1148 ~k~g~d~d-G~i~al~~~~~~d~Ga~~~~~~--------~~~~~~-----------~---~~~~~~Y~ipn~----r~~~ 1200 (1520)
.++-+|.+ |++.=.++....|+|-..|... .++... + .....-|.+|.. .++.
T Consensus 628 aeVeVD~~TG~v~V~r~~~v~D~G~~iNP~~~~gQieGG~~qGiG~aL~Ee~~~d~G~~~~~~~~dY~ip~~~D~P~i~v 707 (769)
T 1rm6_A 628 VEASVDEITGKVTAHKVWVAVDVGKALNPLAVEGQTQGGVWMGMGQALSEETVYDNGRMVHGNILDYRVPTIVESPDIEV 707 (769)
T ss_dssp EEEEECTTTCCEEEEEEEEEEECSSCSSHHHHHHHHHHHHHHHHHHHHTCCCCEETTEESCCSTTTSCCCCTTTCCEEEE
T ss_pred EEEEEECCCceEEEEEEEEEEECCccCCHHHHHHHHHhHHHHHHHHHhcceeEecCCEeCCCChhhccCCCcccCCCEEE
Confidence 48899875 9999999999999999877531 111110 0 011233655432 4666
Q ss_pred EEEecCCCCCccc--CCCCchhHHHHHHHHHHHHHHHhCCC
Q psy7003 1201 NAVRTDKPTYGFT--RSPGACEVTAFIEHVMDHIATVVNRD 1239 (1520)
Q Consensus 1201 ~~v~TN~p~~ga~--Rg~G~~q~~fa~E~~mD~iA~~lg~D 1239 (1520)
..+.+..+ .++| +|.|.+...-+.=-+.+.+...+|..
T Consensus 708 ~~ve~~~~-~~p~GaKGvGE~~~~~~~~AIaNAv~~A~G~r 747 (769)
T 1rm6_A 708 IIVESMDP-NGPFGAKEASEGMLAGFLPAIHEAVYEAVGVR 747 (769)
T ss_dssp EEECCCCT-TSGGGCCCCSSTTTTTHHHHHHHHHHHHHSCC
T ss_pred EEEeCCCC-CCCCCCccccccchhhHHHHHHHHHHHHhCCC
Confidence 77877666 4676 78888777666666788888888864
No 79
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=88.24 E-value=0.54 Score=54.70 Aligned_cols=75 Identities=12% Similarity=0.146 Sum_probs=57.2
Q ss_pred EEEEcCCHHHHHHHHhc---CCCCCCcEEEEecchhhhccCCCCCCeeeeCCCcccccceEEeCCeEEEccccCHHHHHH
Q psy7003 517 IWYIVTEVREIFEIFDG---LEANQTYMLVGGNTGYGVYRPRVPVDVYIQIRDIKELRQIFTRNGYVLMGSATTLTEAMD 593 (1520)
Q Consensus 517 ~~~rPtSLeEal~ll~~---~p~~~~a~lVAGGTdLgv~~k~~~~~~lIdIs~I~EL~~I~~~~~~L~IGA~vTlsel~e 593 (1520)
.+++|+|.+|+.++++. +. -...+++|||++...... ....+||+++ |+.|+.+++.+++||++++.++.+
T Consensus 51 ~vv~P~s~eev~~~l~~a~~~~--~pv~~~GgGtnl~~~~~~-~~gvvI~l~~---m~~i~id~~~v~v~aGv~~~~l~~ 124 (326)
T 1hsk_A 51 FYITPTKNEEVQAVVKYAYQNE--IPVTYLGNGSNIIIREGG-IRGIVISLLS---LDHIEVSDDAIIAGSGAAIIDVSR 124 (326)
T ss_dssp EEECCSSHHHHHHHHHHHHHTT--CCEEEESSCSSEEECTTC-EEEEEEECTT---CCCEEEETTEEEEETTSBHHHHHH
T ss_pred EEEEcCCHHHHHHHHHHHHHcC--CCEEEECCCCccccCCCC-CCeEEEEeCC---CCceEEcCCEEEEeCCCcHHHHHH
Confidence 47899999999988763 22 247889999998643211 1257899876 677766778999999999999998
Q ss_pred hhhh
Q psy7003 594 YFDR 597 (1520)
Q Consensus 594 ~L~~ 597 (1520)
.+.+
T Consensus 125 ~l~~ 128 (326)
T 1hsk_A 125 VARD 128 (326)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
No 80
>3vr8_B Iron-sulfur subunit of succinate dehydrogenase; membrane protein, reductase, mitochondria MEMB oxidoreductase; HET: FAD HEM RQX EPH; 2.81A {Ascaris suum} PDB: 3vrb_B*
Probab=87.00 E-value=0.36 Score=55.24 Aligned_cols=40 Identities=25% Similarity=0.554 Sum_probs=32.3
Q ss_pred cCCC-CcchhHHHHhhh---c-ccCccccccCCCccceeeeeccC
Q psy7003 312 EVPP-GTRLVDFIRDYA---R-LKGTKYMCREGGCGVCTVTVTSS 351 (1520)
Q Consensus 312 ~~~~-~~tll~~Lr~~~---~-l~gtk~~C~~g~cGactV~v~~~ 351 (1520)
++++ ++|||+.||+.. . ..+.+.+|..|.||+|+|.|...
T Consensus 60 ~v~~~~~tlLdaL~~i~~~~~ptl~~~~~C~~G~CGsC~V~InG~ 104 (282)
T 3vr8_B 60 DLDKCGTMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIAGE 104 (282)
T ss_pred EeCCCCCcHHHHHHhcCcccCCceeecCCCCCCCCCCCEEEECCE
Confidence 4566 899999999732 3 37888999999999999999543
No 81
>1czp_A Ferredoxin I; [2Fe-2S] protein, crystal reduced with dithionite, electron; 1.17A {Nostoc SP} SCOP: d.15.4.1 PDB: 1ewy_C* 1fxa_A 1qt9_A 1qog_A 1j7c_A 1j7b_A 1qof_A 1qob_A 1j7a_A 1qoa_A 1rfk_A 3p63_A 4fxc_A 3ab5_A 1roe_A 2cjn_A 2cjo_A 1off_A 1dox_A 1doy_A ...
Probab=86.55 E-value=0.57 Score=44.85 Aligned_cols=49 Identities=22% Similarity=0.458 Sum_probs=36.1
Q ss_pred ceEEEECCE--EEEecccCCCCcchhHHHHhhhcccCccccccCCCccceeeeec
Q psy7003 297 TVRFTINGV--VYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVT 349 (1520)
Q Consensus 297 ~~~f~~ng~--~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~~g~cGactV~v~ 349 (1520)
.++|..++. ...+ +++++.||++.+++ .|+. .+..|..|.||.|.|.|.
T Consensus 4 ~V~~~~~~~~~~~~~--~~~~g~tlL~a~~~-~gi~-i~~~C~~G~Cg~C~v~v~ 54 (98)
T 1czp_A 4 KVTLINEAEGTKHEI--EVPDDEYILDAAEE-QGYD-LPFSCRAGACSTCAGKLV 54 (98)
T ss_dssp EEEEEETTTTEEEEE--EEETTSCHHHHHHH-TTCC-CCCSSSSSSSSTTEEEEE
T ss_pred EEEEEeCCCCCcEEE--EeCCCCCHHHHHHH-cCCC-ccCCCCCCCCCCCeEEEc
Confidence 466766432 3333 45789999999987 4655 677899999999998874
No 82
>1frr_A Ferredoxin I; electron transfer(iron-sulfur protein); 1.80A {Equisetum arvense} SCOP: d.15.4.1
Probab=86.24 E-value=0.51 Score=44.69 Aligned_cols=48 Identities=25% Similarity=0.595 Sum_probs=36.0
Q ss_pred ceEEE-ECCEEEEecccCCCCcchhHHHHhhhcccCccccccCCCccceeeeec
Q psy7003 297 TVRFT-INGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVT 349 (1520)
Q Consensus 297 ~~~f~-~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~~g~cGactV~v~ 349 (1520)
.++|. .|| ...+ ++++++||++.+++. |+. -...|..|.||.|.|.|.
T Consensus 3 ~v~~~~~~g-~~~~--~~~~g~tlL~a~~~~-gi~-i~~~C~~G~Cg~C~v~v~ 51 (95)
T 1frr_A 3 KTVLKTPSG-EFTL--DVPEGTTILDAAEEA-GYD-LPFSCRAGACSSCLGKVV 51 (95)
T ss_dssp EEEEEETTE-EEEE--EECTTCCHHHHHHHT-TCC-CCCSSSSSSSSTTEEEEE
T ss_pred EEEEEeCCC-cEEE--EeCCCCcHHHHHHHc-CCC-CCCCCCCcCCCCCEEEEE
Confidence 46776 566 3333 467899999999864 553 566899999999998874
No 83
>1frd_A Heterocyst [2Fe-2S] ferredoxin; electron transport; 1.70A {Nostoc SP} SCOP: d.15.4.1
Probab=86.12 E-value=0.62 Score=44.49 Aligned_cols=49 Identities=22% Similarity=0.432 Sum_probs=36.8
Q ss_pred ceEEEECCE--EEEecccCCCCcchhHHHHhhhcccCccccccCCCccceeeeec
Q psy7003 297 TVRFTINGV--VYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVT 349 (1520)
Q Consensus 297 ~~~f~~ng~--~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~~g~cGactV~v~ 349 (1520)
.++|..++. ...+ +++++.||++.+++ .|+. ....|..|.||.|.|.|.
T Consensus 4 ~V~~~~~~~~~~~~~--~~~~g~tlL~a~~~-~gi~-i~~~C~~G~Cg~C~v~v~ 54 (98)
T 1frd_A 4 QVRLINKKQDIDTTI--EIDEETTILDGAEE-NGIE-LPFSCHSGSCSSCVGKVV 54 (98)
T ss_dssp EEEEEETTTTEEEEE--EEETTSCHHHHHHH-TTCC-CCCSSSSSSSSTTEEEEE
T ss_pred EEEEEeCCCCCCEEE--EeCCCCcHHHHHHH-cCCC-cccCCCCCCCCCCEEEEE
Confidence 577887442 4444 45789999999986 4554 567899999999998874
No 84
>3lxf_A Ferredoxin; iron, iron-sulfur, metal-binding, metal protein; 2.30A {Novosphingobium aromaticivorans} SCOP: d.15.4.0
Probab=84.65 E-value=0.85 Score=44.35 Aligned_cols=50 Identities=28% Similarity=0.509 Sum_probs=38.8
Q ss_pred eEEE-ECCEEEEecccCCCCcchhHHHHhhhcccCcccccc-CCCccceeeeecc
Q psy7003 298 VRFT-INGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCR-EGGCGVCTVTVTS 350 (1520)
Q Consensus 298 ~~f~-~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~-~g~cGactV~v~~ 350 (1520)
|+|. .+|+.+.+ +++++.||++.+++ +++.+-...|+ .|.||.|.|.|.+
T Consensus 3 vt~~~~~G~~~~~--~~~~g~tll~a~~~-~gi~~i~~~C~G~G~CgtC~v~v~~ 54 (104)
T 3lxf_A 3 ILVTTRDGTRTEI--QAEPGLSLMEALRD-AGIDELLALCGGCCSCATCHVLVAP 54 (104)
T ss_dssp EEEECTTSCEEEE--ECCTTSBHHHHHHH-TTCTTCCCTTCSSSSCSTTEEEECG
T ss_pred EEEEeCCCCEEEE--EECCCChHHHHHHH-cCCCCCCcCCCCCCCCCCCEEEECC
Confidence 5564 37776666 57899999999986 57776677898 8999999988743
No 85
>3hui_A Ferredoxin; cytochrome P450, electron transfer, iron, iron-sulfur, metal-binding, electron transport; 2.01A {Rhodopseudomonas palustris}
Probab=83.13 E-value=1.1 Score=45.17 Aligned_cols=56 Identities=21% Similarity=0.414 Sum_probs=39.7
Q ss_pred cCCCcceE--EE-ECCEEEEecccCCCCcchhHHHHhhhcccCcccccc-CCCccceeeeecc
Q psy7003 292 SDTSSTVR--FT-INGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCR-EGGCGVCTVTVTS 350 (1520)
Q Consensus 292 ~~~~~~~~--f~-~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~-~g~cGactV~v~~ 350 (1520)
+...+|++ |. .+|+...+ +++++.||++.+++ +++.|-...|+ +|.||.|.|.|.+
T Consensus 16 ~~~~~M~~Vt~~~~~G~~~~v--~~~~G~tLL~aa~~-~gi~gi~~~C~G~G~CgtC~v~v~~ 75 (126)
T 3hui_A 16 PRGSHMAKINFVDHTGETRTV--EVEEGATVMEAAIR-NAIPGVEAECGGACACATCHVYVDE 75 (126)
T ss_dssp CTTCSEEEEEEECTTSCEEEE--EEETTSBHHHHHHT-TTCTTCCCTTSSSSCCSTTEEEECG
T ss_pred CCCCCceEEEEEeCCCCEEEE--EECCCCcHHHHHHH-cCCCCCccCCCCCCCCCCCEEEECC
Confidence 33445544 44 46765555 46789999999985 57776667897 7999999887743
No 86
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=83.12 E-value=0.98 Score=54.16 Aligned_cols=77 Identities=8% Similarity=0.082 Sum_probs=56.6
Q ss_pred EEEcCCHHHHHHHHhcCCCCCCcEEEEecchhhhccCCCCCCeeeeCCCcccccceEEeCCeEEEccccCHHHHHHhhhh
Q psy7003 518 WYIVTEVREIFEIFDGLEANQTYMLVGGNTGYGVYRPRVPVDVYIQIRDIKELRQIFTRNGYVLMGSATTLTEAMDYFDR 597 (1520)
Q Consensus 518 ~~rPtSLeEal~ll~~~p~~~~a~lVAGGTdLgv~~k~~~~~~lIdIs~I~EL~~I~~~~~~L~IGA~vTlsel~e~L~~ 597 (1520)
+++|+|.+|+.++++... ..++++|||+............+||++++..+..+..++..++++|++++.++.+.+..
T Consensus 24 v~~P~s~~ev~~~v~~a~---~v~~~G~G~s~~~~~~~~~~g~vi~l~~l~~i~~~d~~~~~v~v~aG~~l~~l~~~l~~ 100 (422)
T 2vfr_A 24 LLRPHSLDALRALVADSA---RVRVLGSGHSFNEIAEPGDGGVLLSLAGLPSVVDVDTAARTVRVGGGVRYAELARVVHA 100 (422)
T ss_dssp CBCCSSHHHHHHHHHHCS---SEEECSSCCCCSSTTCCCTTCEEECSTTSCCCEEEETTTTEEEEETTCBHHHHHHHHHH
T ss_pred EEeCCCHHHHHHHHHhCC---CEEEEECCCCCCCCccCCCCcEEEEhhhCCCcEEEcCCCCEEEEcCCCCHHHHHHHHHH
Confidence 578999999999887643 58889999876554331223689999865443333334579999999999999987765
No 87
>1xlq_A Putidaredoxin, PDX; [2Fe-2S], ferredoxin, oxidoreductase; 1.45A {Pseudomonas putida} SCOP: d.15.4.1 PDB: 1xlp_A 1oqr_A 1r7s_A 1pdx_A 1yji_A 1yjj_A 1oqq_A 1xln_A 1xlo_A 3lb8_C* 1put_A 1gpx_A
Probab=82.98 E-value=0.96 Score=43.82 Aligned_cols=51 Identities=20% Similarity=0.365 Sum_probs=38.2
Q ss_pred ceEE-EECCEEEEecccCCCCcchhHHHHhhhcccCcccccc-CCCccceeeeecc
Q psy7003 297 TVRF-TINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCR-EGGCGVCTVTVTS 350 (1520)
Q Consensus 297 ~~~f-~~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~-~g~cGactV~v~~ 350 (1520)
.++| ..+|+...+ ++++|.||++.+++ +|+.|-...|+ +|.||.|-|.|.+
T Consensus 2 ~V~~~~~~g~~~~~--~~~~g~tlLeaa~~-~gi~~i~~~C~g~G~CgtC~v~v~~ 54 (106)
T 1xlq_A 2 KVVYVSHDGTRREL--DVADGVSLMQAAVS-NGIYDIVGDCGGSASCATCHVYVNE 54 (106)
T ss_dssp EEEEECTTSCEEEE--ECCTTCBHHHHHHH-TTCTTSCCTTCSSSSSCTTEEEECT
T ss_pred EEEEEeCCCCEEEE--EECCCCcHHHHHHH-cCCCCCCcCCCCCcccCcCEEEECC
Confidence 4667 467855555 56899999999985 56666677895 7999999988744
No 88
>1t3q_B Quinoline 2-oxidoreductase large subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.41.1.1 d.133.1.1
Probab=82.18 E-value=32 Score=44.70 Aligned_cols=92 Identities=13% Similarity=0.024 Sum_probs=60.2
Q ss_pred cceeeeCCC-CcEEEEEEEEEEecCCCcccch--------hhhHhh------------c-c--cCCCCCCCCce----EE
Q psy7003 1147 TYKCGVDKN-GVIQNLSTVFNVDKGMTLNENG--------FLHVRF------------G-L--GQASIYDPSTF----RV 1198 (1520)
Q Consensus 1147 ~~k~g~d~d-G~i~al~~~~~~d~Ga~~~~~~--------~~~~~~------------~-~--~~~~~Y~ipn~----r~ 1198 (1520)
-.++-+|.+ |++.=+++....|+|-..|... .++... + + ....-|.+|.. .+
T Consensus 643 ~aeVeVD~~TG~v~V~r~~~v~D~G~~iNP~~~~gQieGG~~qGiG~aL~Ee~~~d~~G~~~~~~~~dY~ip~~~D~P~i 722 (788)
T 1t3q_B 643 AAIVEIDASTYATRVTDFFAVEDCGTMINPMIVEGQIRGGIAQAIGQTLLEEVIYDDFGQLVTTTLMDYLIPTTLDVPDI 722 (788)
T ss_dssp EEEEEEETTTCCEEEEEEEEEEECBSCSCHHHHHHHHHHHHHHHHHHHHTCCBCBCTTSCBCCCSTTTSCCCCTTTCCCE
T ss_pred EEEEEEECCCceEEEEEEEEEEECCccCCHHHHHHHHHHhHHHHHHHHhcceeEECCCCCCCCCChhhccCCCcccCCCE
Confidence 348889875 9999999999999999877531 111100 0 0 01123544432 35
Q ss_pred EEEEEecCCCCCccc--CCCCchhHHHHHHHHHHHHHHHh---CCC
Q psy7003 1199 VANAVRTDKPTYGFT--RSPGACEVTAFIEHVMDHIATVV---NRD 1239 (1520)
Q Consensus 1199 ~~~~v~TN~p~~ga~--Rg~G~~q~~fa~E~~mD~iA~~l---g~D 1239 (1520)
+...+.+..+ .+.+ +|.|.+...-+.=.+.+.|.+.+ |..
T Consensus 723 ~v~~ve~~~~-~~p~GaKGvGE~~~~~~a~AiaNAI~~A~~~~G~r 767 (788)
T 1t3q_B 723 RIRHLETPSP-LVPGGIKGMGESAMISAPAAVVAAVNDALAHLEVV 767 (788)
T ss_dssp EEEECCCCCT-TSGGGBCCCTTHHHHHHHHHHHHHHHHHHGGGTCC
T ss_pred EEEEEeCCCC-CCCCCCccccccchhhHHHHHHHHHHHHHHhcCCc
Confidence 5566777665 5676 79998888777777777888888 763
No 89
>1i7h_A Ferredoxin; 2Fe-2S,electron transport; 1.70A {Escherichia coli} SCOP: d.15.4.1
Probab=81.73 E-value=1.2 Score=43.50 Aligned_cols=37 Identities=19% Similarity=0.450 Sum_probs=29.7
Q ss_pred cCCCCcchhHHHHhhhcccCccccc-cCCCccceeeeecc
Q psy7003 312 EVPPGTRLVDFIRDYARLKGTKYMC-REGGCGVCTVTVTS 350 (1520)
Q Consensus 312 ~~~~~~tll~~Lr~~~~l~gtk~~C-~~g~cGactV~v~~ 350 (1520)
+++++.||++.+++. |+. .+..| +.|.||.|.|.|.+
T Consensus 20 ~~~~g~tlL~a~~~~-gi~-i~~~C~~~G~Cg~C~v~v~~ 57 (111)
T 1i7h_A 20 EANSGETILDAALRN-GIE-IEHACEKSCACTTCHCIVRE 57 (111)
T ss_dssp ECCTTCBHHHHHHHT-TCC-CCCTTSSSSCCSTTEEEEEE
T ss_pred EeCCCCcHHHHHHHc-CCC-CcccCCCCCcCCCCEEEEcc
Confidence 467899999999875 654 67789 58999999988743
No 90
>1n62_B Carbon monoxide dehydrogenase large chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.41.1.1 d.133.1.1 PDB: 1n5w_B* 1n61_B* 1n60_B* 1n63_B* 1zxi_B*
Probab=81.45 E-value=45 Score=43.43 Aligned_cols=57 Identities=18% Similarity=0.195 Sum_probs=44.2
Q ss_pred CeeEEEEeCC-eEEEEeCCCCh-----HHHHHHHHHHhCCCCCcEEEEe------cccCCCCCCCCCCC
Q psy7003 973 QTALCVPSED-GVDIYAASQWV-----TLVQESVAGVLGLPNNRVNVKT------RRIGGGYGAKLSRS 1029 (1520)
Q Consensus 973 ~~a~A~~~ed-~l~V~~sTQ~p-----~~vq~~vA~~LGlp~~kVrV~~------~~vGGgFG~K~~~~ 1029 (1520)
.++.+....| .++|+++++.. +.+.+.+|+.||+|.++|+|.. +.-+|.+|++.+..
T Consensus 507 ~~a~v~l~~DG~v~v~~g~~e~GqG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~~t~aSr~t~~ 575 (809)
T 1n62_B 507 DSAEIRIHPTGSVIARMGTKSQGQGHETTYAQIIATELGIPADDIMIEEGNTDTAPYGLGTYGSRSTPT 575 (809)
T ss_dssp EEEEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTCCGGGEEEECCBTTTSCCCCCSCTTCTTTT
T ss_pred ccEEEEEecCCeEEEEECCCCCCCCHHHHHHHHHHHHhCCCHHHEEEecCCCCCCCCCCCcccchHHHH
Confidence 4566666544 69999998665 4567888999999999999976 45578889888754
No 91
>1uwm_A Ferredoxin VI, FDVI; electron transport, metal-binding, iron-sulfur, iron, 2Fe-2S; 2.0A {Rhodobacter capsulatus} SCOP: d.15.4.1 PDB: 1e9m_A
Probab=80.43 E-value=1.3 Score=43.00 Aligned_cols=50 Identities=26% Similarity=0.502 Sum_probs=36.8
Q ss_pred ceEE-EECCEEEEecccCCCCcchhHHHHhhhcccCcccccc-CCCccceeeeec
Q psy7003 297 TVRF-TINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCR-EGGCGVCTVTVT 349 (1520)
Q Consensus 297 ~~~f-~~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~-~g~cGactV~v~ 349 (1520)
.++| ..+|+...+ +++++.||++.+++ +|+.|-...|+ .|.||.|-|-|.
T Consensus 2 ~v~~~~~~g~~~~~--~~~~g~tlL~aa~~-~gi~~i~~~C~g~G~CgtC~v~v~ 53 (106)
T 1uwm_A 2 KIIFIEHNGTRHEV--EAKPGLTVMEAARD-NGVPGIDADCGGACACSTCHAYVD 53 (106)
T ss_dssp EEEEECTTCCEEEE--ECCTTSBHHHHHHT-TTCTTCCCTTSSSSSSCTTEEEEC
T ss_pred EEEEEeCCCCEEEE--EECCCCcHHHHHHH-cCCCCcccCCCCCCCcCcCEEEEC
Confidence 3566 357754455 56899999999985 56665667895 799999988774
No 92
>1kf6_B Fumarate reductase iron-sulfur protein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.1.2.1 d.15.4.2 PDB: 1kfy_B* 1l0v_B* 2b76_B* 3cir_B* 3p4p_B* 3p4q_B* 3p4r_B* 3p4s_B*
Probab=79.62 E-value=1.4 Score=48.83 Aligned_cols=39 Identities=23% Similarity=0.392 Sum_probs=31.3
Q ss_pred cCCCCcchhHHHHhhh----cccCccccccCCCccceeeeecc
Q psy7003 312 EVPPGTRLVDFIRDYA----RLKGTKYMCREGGCGVCTVTVTS 350 (1520)
Q Consensus 312 ~~~~~~tll~~Lr~~~----~l~gtk~~C~~g~cGactV~v~~ 350 (1520)
++++++|||+.||... .....+.+|..|.||+|+|.|..
T Consensus 29 ~~~~~~tll~al~~~~~~~~p~l~~~~~c~~G~Cg~C~v~v~G 71 (243)
T 1kf6_B 29 PYDATTSLLDALGYIKDNLAPDLSYRWSCRMAICGSCGMMVNN 71 (243)
T ss_dssp EECTTCBHHHHHHHHHHHTCTTCCCCCCCSSSSSCCCEEEETT
T ss_pred ecCCCChHHHHHHHcCcccCCCcccccCCCCCcCCCCEeEECC
Confidence 5678999999999853 12356789999999999999843
No 93
>2h88_B Succinate dehydrogenase IP subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_B* 1yq3_B* 2fbw_B* 2h89_B* 2wqy_B* 3aef_B* 3abv_B* 3ae1_B* 3ae3_B* 3ae2_B* 3ae5_B* 3ae6_B* 3ae7_B* 3ae8_B* 3ae9_B* 3aea_B* 3aeb_B* 3aec_B* 3aed_B* 3aee_B* ...
Probab=79.61 E-value=1.1 Score=49.99 Aligned_cols=39 Identities=23% Similarity=0.544 Sum_probs=31.5
Q ss_pred cCCC-CcchhHHHHhhh---c-ccCccccccCCCccceeeeecc
Q psy7003 312 EVPP-GTRLVDFIRDYA---R-LKGTKYMCREGGCGVCTVTVTS 350 (1520)
Q Consensus 312 ~~~~-~~tll~~Lr~~~---~-l~gtk~~C~~g~cGactV~v~~ 350 (1520)
++++ ++|||+.||... . ....+.+|..|.||+|+|.|..
T Consensus 36 ~~~~~~~tlLd~l~~~~~~~~p~l~~~~~c~~g~Cg~C~v~i~G 79 (252)
T 2h88_B 36 DLNKCGPMVLDALIKIKNELDSTLTFRRSCREGICGSCAMNIAG 79 (252)
T ss_dssp EGGGSCSBHHHHHHHHHHHTCTTCCCCCSCSSSSSCTTEEEETT
T ss_pred ecCCCCChHHHHHHHhCcccCCCccccCCCCCCCCCCCEEEECC
Confidence 4556 999999999864 2 4567789999999999999843
No 94
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=78.75 E-value=3.6 Score=54.47 Aligned_cols=81 Identities=16% Similarity=0.094 Sum_probs=60.5
Q ss_pred ceEEEEEECCEEEEEcccCCCCCchHHHHHhhcCCC----CCcCC------CCCCCCCeeEEEEC---CccCCCCccccc
Q psy7003 19 SSTVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLK----GTKYM------CREGGCGVCTVTVT---SSHPVTGVDSTY 85 (1520)
Q Consensus 19 ~~~~~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~----g~k~~------c~~g~cGactv~~~---~~~~~~~~~~~~ 85 (1520)
+..|+|++||+.+.. .++.||...|... |.. ++|++ |..|.|..|.|.|+ +- .....
T Consensus 20 ~~~~~~~~dG~~~~~----~~g~tv~~aL~~~-Gv~~~~~s~~~~~prg~~~~~~~c~~~~v~v~~~~~g-----~~~~~ 89 (965)
T 2gag_A 20 EEALSLTVDGAKLSA----FRGDTVASALLAN-GVRRAGNSLYLDRPRGIFAAGVEEPNALVTVSARHEQ-----DIDES 89 (965)
T ss_dssp EEEEEEEETTEEEEE----EETCBHHHHHHHT-TCCBCSCCTTTCCCCBCCCSSTTCCSCEEEECCCSTT-----CCCEE
T ss_pred CCeEEEEECCEEEEe----cCCCHHHHHHHHc-CCeEeecCCCCCCCcccccCCccCCceEEEEccCCCC-----CcCCc
Confidence 457999999998875 4799999999754 432 22333 77899999999999 41 11223
Q ss_pred ccccchhhHHhcCCcEEEEecCCCCC
Q psy7003 86 SVNACLVLVHMCGGWAITTVEGLGSK 111 (1520)
Q Consensus 86 ~v~scl~~~~~~~g~~i~T~eg~~~~ 111 (1520)
.+.+|.+++ .+|..|+|..|+|..
T Consensus 90 ~~~ac~~~~--~~gm~~~~~~glg~~ 113 (965)
T 2gag_A 90 MLPATTVPV--TEDLNATLLSGLGVL 113 (965)
T ss_dssp EEEGGGCBC--CTTEEEEECSSCBCC
T ss_pred cccceeeec--ccceEeecccCCCCC
Confidence 688998886 589999999998743
No 95
>3hrd_A Nicotinate dehydrogenase large molybdopterin subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=78.63 E-value=13 Score=44.74 Aligned_cols=124 Identities=16% Similarity=0.152 Sum_probs=74.4
Q ss_pred cceEEEEEEcCCCeEEEEecCcccCcchHHHHHHHHHHHhCCCCCcEEEecCCCCCCCCCCCCcccccccchHHHHHHHH
Q psy7003 1316 VSYAILSVFRRDATVAITTSGIEIGQGLHTKVAQACAYELGIPIEKIVLKPAQNNIFPNAANTGGSTASDNAARCILLCC 1395 (1520)
Q Consensus 1316 ~~~a~v~v~~~DGsV~i~~g~~e~GQG~~T~~aQiaA~~Lgip~e~I~v~~~dT~~~p~~~~t~gS~~t~~~g~Av~~Ac 1395 (1520)
...++.. ++.||.++|.++. |+.+ .+.+.+|+.||||.++|+|.. |.-+|..|++........+..++
T Consensus 188 p~~~~A~-~~~~g~l~v~~st----Q~p~-~~r~~vA~~Lglp~~~VrV~~------~~vGGgFG~K~~~~~~~~aa~~A 255 (425)
T 3hrd_A 188 PDAGVSY-YDNEGMLTVVVST----QNPH-YDRGEVAGMLALPNSKVRIIQ------ATTGGGFGGKLDLSVQCHCALLT 255 (425)
T ss_dssp CCEEEEE-ECTTCCEEEEECC----SCHH-HHHHHHHHHTTCCGGGEEEEE------CBCCCCTTTTSSCSSHHHHHHHH
T ss_pred CceEEEE-ECCCCeEEEEECC----CCHH-HHHHHHHHHhCCChhhEEEEe------CCCCCCCCCCcccCHHHHHHHHH
Confidence 3455555 5668999999876 4444 456778899999999999985 45577778776544332333333
Q ss_pred HHHHHHhhhhhhcCCCHHHHHHHHhhcCceeEEEEEeeccCCCCCCCccccceEEEEEEEEECCCCcEEEEEEEEEEecC
Q psy7003 1396 QELKTRLMPYMDKGKSWEKTISDAFERGVDLQVTKSVSSQQTPDLLPMYTIPTAAATEVEVDLLTGQHQILRVDILEDTG 1475 (1520)
Q Consensus 1396 ~~l~~rl~~~~~~~~~w~~~~~~a~~~gv~l~~~~~~~~~~~~~~~~~~~~~ga~~aEVEVD~~TG~v~V~r~~~~~D~G 1475 (1520)
+++. +|++= -.+=++-..... +-....+-.++-+| ..|++.=.++++..|+|
T Consensus 256 ~~~g---rPVk~-~~tR~e~~~~~~-----------------------~R~~~~~~~~~g~d-~dG~i~a~~~~~~~~~G 307 (425)
T 3hrd_A 256 YHTK---KPVKM-VRSREESTTVSS-----------------------KRHPMTMHCKTGAT-KDGRLQAVQVEMFGDTG 307 (425)
T ss_dssp HHHC---SCEEE-ECCHHHHHHHSC-----------------------BCCCEEEEEEEEEC-TTCCEEEEEEEEEEEEE
T ss_pred HHhC---CCEEE-EeehHHHhhhcC-----------------------CCCCeEEEEEEEEC-CCCcEEEEEEEEEEccc
Confidence 3332 22210 000011111100 01112344577788 47999999999999999
Q ss_pred cccC
Q psy7003 1476 QSIN 1479 (1520)
Q Consensus 1476 ~~IN 1479 (1520)
...+
T Consensus 308 a~~~ 311 (425)
T 3hrd_A 308 AYAS 311 (425)
T ss_dssp SSCT
T ss_pred cccc
Confidence 7543
No 96
>2bs2_B Quinol-fumarate reductase iron-sulfur subunit B; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.1.2.1 d.15.4.2 PDB: 2bs3_B* 1e7p_B* 1qlb_B* 2bs4_B*
Probab=77.76 E-value=1.8 Score=47.98 Aligned_cols=38 Identities=21% Similarity=0.512 Sum_probs=30.7
Q ss_pred cCCCCcchhHHHHhhh---cc-cCccccccCCCccceeeeec
Q psy7003 312 EVPPGTRLVDFIRDYA---RL-KGTKYMCREGGCGVCTVTVT 349 (1520)
Q Consensus 312 ~~~~~~tll~~Lr~~~---~l-~gtk~~C~~g~cGactV~v~ 349 (1520)
++++++|||+.|+... .. ...+.+|..|.||+|+|.|.
T Consensus 29 ~~~~~~tlL~~l~~~~~~~~~~l~~~~~c~~g~Cg~C~v~i~ 70 (241)
T 2bs2_B 29 EEAPSMTIFIVLNMIRETYDPDLNFDFVCRAGICGSCGMMIN 70 (241)
T ss_dssp ECCTTCBHHHHHHHHHHHTCTTCCCCCSSSSSSSCTTEEEET
T ss_pred eCCCCChHHHHHHHhchhcCCCCccCCCCCCCCCCCCEeEEC
Confidence 4788999999999743 22 35677999999999999993
No 97
>1b9r_A Protein (terpredoxin); structure from molmol, ferredoxin; NMR {Pseudomonas SP} SCOP: d.15.4.1
Probab=76.70 E-value=1.4 Score=42.62 Aligned_cols=51 Identities=18% Similarity=0.415 Sum_probs=36.9
Q ss_pred ceEE-EECCEEEEecccCCCCcchhHHHHhhhcccCcccccc-CCCccceeeeecc
Q psy7003 297 TVRF-TINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCR-EGGCGVCTVTVTS 350 (1520)
Q Consensus 297 ~~~f-~~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~-~g~cGactV~v~~ 350 (1520)
.++| ..+|+...+ +++++.||++.+++ +|+.|-...|. .|.||.|-|-|.+
T Consensus 2 ~V~~~~~~g~~~~~--~~~~g~tlL~aa~~-~gi~~i~~~C~g~G~CgtC~v~v~~ 54 (105)
T 1b9r_A 2 RVVFIDEQSGEYAV--DAQDGQSLMEVATQ-NGVPGIVAECGGSCVCATCRIEIED 54 (105)
T ss_dssp EEEECCTTTSCEEE--ECCTTCCTTHHHHH-HTCCCCCCSSTTSSCCCCCCCEECT
T ss_pred EEEEEeCCCCEEEE--EECCCChHHHHHHH-cCCCCcCcCCCCCCCcCcCEEEECC
Confidence 3566 456744444 46789999999985 56666667897 6999999887744
No 98
>3c8y_A Iron hydrogenase 1; dithiomethylether, H-cluster, iron-sulfur binding, oxidoreductase; HET: HCN; 1.39A {Clostridium pasteurianum} SCOP: c.96.1.1 d.15.4.2 d.58.1.5 PDB: 1c4c_A* 1c4a_A* 1feh_A*
Probab=75.78 E-value=2.7 Score=52.59 Aligned_cols=49 Identities=27% Similarity=0.427 Sum_probs=36.9
Q ss_pred ceEEEECCEEEEecccCCCCcchhHHHHhhhcccC-----cccccc-CCCccceeeeecc
Q psy7003 297 TVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKG-----TKYMCR-EGGCGVCTVTVTS 350 (1520)
Q Consensus 297 ~~~f~~ng~~~~~~~~~~~~~tll~~Lr~~~~l~g-----tk~~C~-~g~cGactV~v~~ 350 (1520)
|++|++||..+++ ++++||++.||+. |+.. .+.++. .|.||+|+|.|..
T Consensus 1 mv~~~ing~~v~v----~~g~tiL~a~~~~-gi~ip~lC~~~~~~~~~G~Cg~C~V~v~g 55 (574)
T 3c8y_A 1 MKTIIINGVQFNT----DEDTTILKFARDN-NIDISALCFLNNCNNDINKCEICTVEVEG 55 (574)
T ss_dssp CEEEEETTEEEEE----CCCCBHHHHHHHT-TCCCCCSSCBTTBCCSSSCCCTTEEEETT
T ss_pred CeEEEECCEEEEe----CCCCHHHHHHHHc-CCCCCcccCCCCCCCCcccCCCCEEEeCC
Confidence 5789999998764 7899999999985 5432 222225 7899999999854
No 99
>1ffv_B CUTL, molybdoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.41.1.1 d.133.1.1 PDB: 1ffu_B*
Probab=74.67 E-value=49 Score=43.06 Aligned_cols=55 Identities=16% Similarity=0.154 Sum_probs=42.4
Q ss_pred CeeEEEEeCC-eEEEEeCCCCh-----HHHHHHHHHHhCCCCCcEEEEec------ccCCCCCCCCC
Q psy7003 973 QTALCVPSED-GVDIYAASQWV-----TLVQESVAGVLGLPNNRVNVKTR------RIGGGYGAKLS 1027 (1520)
Q Consensus 973 ~~a~A~~~ed-~l~V~~sTQ~p-----~~vq~~vA~~LGlp~~kVrV~~~------~vGGgFG~K~~ 1027 (1520)
.++.+....| .++|+++++.. +.+.+.+|+.||+|.++|+|... .-+|.+|++.+
T Consensus 501 ~~a~v~l~~dG~v~v~~g~~e~GqG~~T~~aQiaAe~LGi~~e~V~v~~~DT~~~p~~~~t~aSr~t 567 (803)
T 1ffv_B 501 DSCEIRIHPTGSAIARMGTITQGQGHQTTYAQIIATELGIPSEVIQVEEGDTSTAPYGLGTYGSRST 567 (803)
T ss_dssp EEEEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTCCGGGEEEECCBTTTSCCCCCSCTTCHH
T ss_pred ccEEEEEecCCeEEEEECCcCCCCCHHHHHHHHHHHHHCCCHHHEEEecCCCCCCCCCCCcccchHH
Confidence 4566666544 69999998655 45678899999999999999864 45778887765
No 100
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=74.24 E-value=4.5 Score=47.06 Aligned_cols=77 Identities=12% Similarity=0.147 Sum_probs=57.0
Q ss_pred cEEEEcCCHHHHHHHHh---cCCCCCCcEEEEecchhhhccCCCCCCeeeeCCCcccccceEEeCCeEEEccccCHHHHH
Q psy7003 516 GIWYIVTEVREIFEIFD---GLEANQTYMLVGGNTGYGVYRPRVPVDVYIQIRDIKELRQIFTRNGYVLMGSATTLTEAM 592 (1520)
Q Consensus 516 ~~~~rPtSLeEal~ll~---~~p~~~~a~lVAGGTdLgv~~k~~~~~~lIdIs~I~EL~~I~~~~~~L~IGA~vTlsel~ 592 (1520)
..++.|+|.+|+.++++ ++. -...+++||+.+.+-.. .....+||+++ |+.|..+++.+++||++++.++.
T Consensus 56 ~~vv~P~s~eev~~~v~~a~~~~--~pv~v~GgGsnl~~~~~-~~~gvvI~l~~---~~~I~~d~~~v~v~aG~~~~~l~ 129 (322)
T 3tx1_A 56 DVFVMPKTIEEAQEVVAYCHQNK--IPLTILGNGSNLIIKDG-GIRGVILHLDL---LQTIERNNTQIVAMSGAKLIDTA 129 (322)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTT--CCEEEESCCTTEEECTT-CEEEEEEECTT---CCCEEEETTEEEEETTSBHHHHH
T ss_pred eEEEEeCCHHHHHHHHHHHHHcC--CcEEEECCccCCCcCCC-CCCeEEEECCC---CCcEEECCCEEEEecCcCHHHHH
Confidence 35799999999988765 222 24788999999874321 11257889864 66677788899999999999999
Q ss_pred Hhhhhc
Q psy7003 593 DYFDRT 598 (1520)
Q Consensus 593 e~L~~~ 598 (1520)
+.+.+.
T Consensus 130 ~~l~~~ 135 (322)
T 3tx1_A 130 KFALNE 135 (322)
T ss_dssp HHHHHT
T ss_pred HHHHHc
Confidence 877653
No 101
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=72.37 E-value=4.6 Score=49.40 Aligned_cols=81 Identities=11% Similarity=0.092 Sum_probs=54.9
Q ss_pred cEEEEcCCHHHHHHHHhcCCCC---CCcEEEEecchhhhccCCCCCCeeeeCCCcccccceEEeCCeEEEccccCHHHHH
Q psy7003 516 GIWYIVTEVREIFEIFDGLEAN---QTYMLVGGNTGYGVYRPRVPVDVYIQIRDIKELRQIFTRNGYVLMGSATTLTEAM 592 (1520)
Q Consensus 516 ~~~~rPtSLeEal~ll~~~p~~---~~a~lVAGGTdLgv~~k~~~~~~lIdIs~I~EL~~I~~~~~~L~IGA~vTlsel~ 592 (1520)
...++|.|.+|+.++++...+. ....+++||+++.-.. ......+||++++..+-.+..+...++++|++++.++.
T Consensus 44 ~~vv~P~s~eev~~~v~~a~~~~~~~~v~~~G~G~s~~~~~-~~~~gvvIdl~~l~~i~~~d~~~~~v~v~aGv~l~~L~ 122 (481)
T 4feh_A 44 ANVLRTPDAEMIVKAVARVAESGGGRGAIARGLGRSYGDNA-QNGGGLVIDMTPLNTIHSIDADTKLVDIDAGVNLDQLM 122 (481)
T ss_dssp EEEEECSCHHHHHHHHHHHHTTTCTTCEEEECSSCSSSSTT-CCTTSEEEECTTCCCEEEEETTTTEEEEETTCBHHHHH
T ss_pred CEEEeCCCHHHHHHHHHHHHHcCCCceEEEEeCCcCCCCCC-CCcCeEEEECccCCCceEEcCCCCEEEEcCCccHHHHH
Confidence 3578999999998877632101 2477889998863221 11226899998754433333345689999999999999
Q ss_pred Hhhhh
Q psy7003 593 DYFDR 597 (1520)
Q Consensus 593 e~L~~ 597 (1520)
+.+..
T Consensus 123 ~~l~~ 127 (481)
T 4feh_A 123 KAALP 127 (481)
T ss_dssp HHHGG
T ss_pred HHHHH
Confidence 87765
No 102
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=70.82 E-value=7.1 Score=47.63 Aligned_cols=78 Identities=9% Similarity=0.098 Sum_probs=53.6
Q ss_pred EEEEcCCHHHHHHHHh---cCCCCCCcEEEEecchhhhc-cCCCCCCeeeeCCCcccccceEEeCCeEEEccccCHHHHH
Q psy7003 517 IWYIVTEVREIFEIFD---GLEANQTYMLVGGNTGYGVY-RPRVPVDVYIQIRDIKELRQIFTRNGYVLMGSATTLTEAM 592 (1520)
Q Consensus 517 ~~~rPtSLeEal~ll~---~~p~~~~a~lVAGGTdLgv~-~k~~~~~~lIdIs~I~EL~~I~~~~~~L~IGA~vTlsel~ 592 (1520)
..++|+|.+|+.++++ ++. -...+.+||+++.-. ........+||++++..+..+..++..+++||++++.++.
T Consensus 39 ~vv~P~s~~dv~~~v~~a~~~~--~~v~v~ggGh~~~g~~~~~~~~~vvIdl~~~~~i~~vd~~~~~v~v~aG~~~~~l~ 116 (473)
T 3rja_A 39 AIAQTQTTAHIQSAVQCAKKLN--LKVSAKSGGHSYASFGFGGENGHLMVQLDRMIDVISYNDKTGIAHVEPGARLGHLA 116 (473)
T ss_dssp EEEECCSHHHHHHHHHHHHHTT--CCEEEESSCCCTTCGGGTSSSSCEEEECTTCCCEEEEETTTTEEEECTTCBHHHHH
T ss_pred EEEEeCCHHHHHHHHHHHHHcC--CeEEEEcCCCCCCCCcccCCCCeEEEECCCCCceEEEcCCCCEEEECCCCCHHHHH
Confidence 4789999999987765 332 247888999997622 1111225899998754333333345689999999999998
Q ss_pred Hhhh
Q psy7003 593 DYFD 596 (1520)
Q Consensus 593 e~L~ 596 (1520)
+.+.
T Consensus 117 ~~l~ 120 (473)
T 3rja_A 117 TVLN 120 (473)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8554
No 103
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=66.53 E-value=7.6 Score=47.42 Aligned_cols=79 Identities=16% Similarity=0.198 Sum_probs=55.4
Q ss_pred EEEEcCCHHHHHHHHh---cCCCCCCcEEEEecchhhhccCCCCCCeeeeCCCcccccceEEeCCeEEEccccCHHHHHH
Q psy7003 517 IWYIVTEVREIFEIFD---GLEANQTYMLVGGNTGYGVYRPRVPVDVYIQIRDIKELRQIFTRNGYVLMGSATTLTEAMD 593 (1520)
Q Consensus 517 ~~~rPtSLeEal~ll~---~~p~~~~a~lVAGGTdLgv~~k~~~~~~lIdIs~I~EL~~I~~~~~~L~IGA~vTlsel~e 593 (1520)
..++|+|.+|+.++++ ++. -...+.+|||++.-..-...-..+||+++...+..+..++..++++|++++.++.+
T Consensus 54 ~vv~P~s~eeV~~~v~~a~~~~--~pv~~~GgGt~~~g~~~~~~ggvvIdl~~m~~i~~id~~~~~v~V~aGv~~~~l~~ 131 (476)
T 3pm9_A 54 LVLRPGSTEEVVAICKLANEAR--VALVPQGGNTGLVGGQTPHNGEVVISLKRMDKIREIDTSSNTITVEAGAILQRVQE 131 (476)
T ss_dssp CEECCCSHHHHHHHHHHHHHHT--CCEEEESSSCCSSSTTCCCSSCEEEECTTCCCEEEEETTTTEEEEETTCBHHHHHH
T ss_pred EEEecCCHHHHHHHHHHHHHcC--CeEEEEeCCCCCCCCccCCCCcEEEEeeCCCceEEEcCCCCeEEECCCcCHHHHHH
Confidence 4789999999988765 222 24778899999852211111168999987554444444567899999999999998
Q ss_pred hhhh
Q psy7003 594 YFDR 597 (1520)
Q Consensus 594 ~L~~ 597 (1520)
.+..
T Consensus 132 ~l~~ 135 (476)
T 3pm9_A 132 KAAE 135 (476)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6654
No 104
>3nvz_C Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3ns1_C* 3etr_C* 3nvv_C* 3nvw_C* 3nrz_C* 3nvy_C* 3eub_C* 3b9j_C* 1fiq_C* 3rca_C* 3sr6_C*
Probab=66.01 E-value=39 Score=43.65 Aligned_cols=126 Identities=17% Similarity=0.160 Sum_probs=76.4
Q ss_pred cceEEEEEEc-CCCeEEEEecCcccCcchHHHHHHHHHHHhCCCCCcEEEecCCCCCCCCCCCCcccccccc--hHHHHH
Q psy7003 1316 VSYAILSVFR-RDATVAITTSGIEIGQGLHTKVAQACAYELGIPIEKIVLKPAQNNIFPNAANTGGSTASDN--AARCIL 1392 (1520)
Q Consensus 1316 ~~~a~v~v~~-~DGsV~i~~g~~e~GQG~~T~~aQiaA~~Lgip~e~I~v~~~dT~~~p~~~~t~gS~~t~~--~g~Av~ 1392 (1520)
...++.. ++ .||.++|.++. |+.+ .+...+|+.||||.++|+|.. |.-++..|++.... ..-++.
T Consensus 176 p~~~~A~-~~~~~g~l~v~~st----Q~p~-~~r~~lA~~Lglp~~~VrV~~------~~vGGgFG~K~~~~~~~~~~aa 243 (755)
T 3nvz_C 176 THCTIAI-PKGEEGEMELFVST----QNAM-KTQSFVAKMLGVPVNRILVRV------KRMGGGFGGKETRSTLVSVAVA 243 (755)
T ss_dssp CCEEEEE-ECSSTTCEEEEECC----SCHH-HHHHHHHHHHTCCGGGEEEEE------CCCSCCTTTTSSTTHHHHHHHH
T ss_pred CceEEEE-EeCCCCeEEEEECC----CCHH-HHHHHHHHHHCCCCccEEEEE------CCCCCCCCCcccccchHHHHHH
Confidence 3455554 55 58999999876 5554 456677899999999999985 55678888887532 122333
Q ss_pred HHHHHHHHHhhhhhhcCCCHHHHHHHHhhcCceeEEEEEeeccCCCCCCCccccceEEEEEEEEECCCCcEEEEEEEEEE
Q psy7003 1393 LCCQELKTRLMPYMDKGKSWEKTISDAFERGVDLQVTKSVSSQQTPDLLPMYTIPTAAATEVEVDLLTGQHQILRVDILE 1472 (1520)
Q Consensus 1393 ~Ac~~l~~rl~~~~~~~~~w~~~~~~a~~~gv~l~~~~~~~~~~~~~~~~~~~~~ga~~aEVEVD~~TG~v~V~r~~~~~ 1472 (1520)
.|+++++ +|++= -.+=++-..... +-....+-.++-+| ..|++.=.++++..
T Consensus 244 ~aA~~~g---rPVk~-~~tR~e~~~~~~-----------------------~R~~~~~~~~~g~d-~dG~i~a~~~~~~~ 295 (755)
T 3nvz_C 244 LAAYKTG---HPVRC-MLDRNEDMLITG-----------------------GRHPFLARYKVGFM-KTGTIVALEVDHYS 295 (755)
T ss_dssp HHHHHHS---SCEEE-ECCHHHHHHHSC-----------------------CBCCEEEEEEEEEC-TTCCEEEEEEEEEE
T ss_pred HHHHHhC---CCEEE-EecHHHHHhhcC-----------------------CCCceEEEEEEEEC-CCCcEEEEEEEEEE
Confidence 3444432 12210 001111111100 00112334567787 47999999999999
Q ss_pred ecCcccChH
Q psy7003 1473 DTGQSINPA 1481 (1520)
Q Consensus 1473 D~G~~INP~ 1481 (1520)
|+|...+..
T Consensus 296 d~Ga~~~~~ 304 (755)
T 3nvz_C 296 NAGNSRDLS 304 (755)
T ss_dssp EEESSCTTH
T ss_pred ccCcCcCcc
Confidence 999987753
No 105
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=66.00 E-value=9 Score=47.40 Aligned_cols=75 Identities=13% Similarity=0.146 Sum_probs=53.3
Q ss_pred EEEEcCCHHHHHHHHh---cCCCCCCcEEEEecchhhhccCCCCCCeeeeCCCcccccceEEe--CCeEEEccccCHHHH
Q psy7003 517 IWYIVTEVREIFEIFD---GLEANQTYMLVGGNTGYGVYRPRVPVDVYIQIRDIKELRQIFTR--NGYVLMGSATTLTEA 591 (1520)
Q Consensus 517 ~~~rPtSLeEal~ll~---~~p~~~~a~lVAGGTdLgv~~k~~~~~~lIdIs~I~EL~~I~~~--~~~L~IGA~vTlsel 591 (1520)
..+.|+|.+|+.++++ ++. -...+.+||+++........-..+||++++ +.|+.+ +..+++||++++.++
T Consensus 61 ~vv~p~s~~dv~~~v~~a~~~~--~~v~v~ggGh~~~g~~~~~~~gvvIdl~~l---~~i~~d~~~~~v~v~aG~~~~~l 135 (530)
T 2y3s_A 61 EIHLVGSAAEIEQVLSRAVRSG--KRVAVRSGGHCYEDFVANSDVRVVMDMSRL---SAVGFDEERGAFAVEAGATLGAV 135 (530)
T ss_dssp EEEECCSHHHHHHHHHHHHHTT--CCEEEESSCCCSSSTTTCTTCCEEEECTTC---CCEEEETTTTEEEEETTCBHHHH
T ss_pred EEEecCCHHHHHHHHHHHHHcC--CcEEEECCCCCCCCCcccCCCeEEEEcccC---CCEEEcCCCCEEEEeCCCCHHHH
Confidence 4789999999887664 332 247788999987553221122589999764 555554 368999999999999
Q ss_pred HHhhh
Q psy7003 592 MDYFD 596 (1520)
Q Consensus 592 ~e~L~ 596 (1520)
.+.+.
T Consensus 136 ~~~l~ 140 (530)
T 2y3s_A 136 YKTLF 140 (530)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88553
No 106
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=64.00 E-value=6.6 Score=47.54 Aligned_cols=75 Identities=7% Similarity=0.052 Sum_probs=54.1
Q ss_pred EEEEcCCHHHHHHHHh---cCCCCCCcEEEEecchhhhccCCCCCCeeeeCCCcccccceEEe--CCeEEEccccCHHHH
Q psy7003 517 IWYIVTEVREIFEIFD---GLEANQTYMLVGGNTGYGVYRPRVPVDVYIQIRDIKELRQIFTR--NGYVLMGSATTLTEA 591 (1520)
Q Consensus 517 ~~~rPtSLeEal~ll~---~~p~~~~a~lVAGGTdLgv~~k~~~~~~lIdIs~I~EL~~I~~~--~~~L~IGA~vTlsel 591 (1520)
..+.|+|.+|+.++++ ++. -...+.+||+++.... ......+||++++ +.|..+ +..+++||++++.++
T Consensus 41 ~vv~p~s~~dv~~~v~~a~~~~--~~~~v~ggGh~~~~~~-~~~~gvvi~l~~l---~~i~~d~~~~~v~v~aG~~~~~l 114 (459)
T 2bvf_A 41 LIARCLSAGDVAKSVRYACDNG--LEISVRSGGHNPNGYA-TNDGGIVLDLRLM---NSIHIDTAGSRARIGGGVISGDL 114 (459)
T ss_dssp EEEECCSHHHHHHHHHHHHHHT--CCEEEESSCCCTTCTT-CCSSSEEEECTTC---CCEEEETTTTEEEEETTCBHHHH
T ss_pred EEEecCCHHHHHHHHHHHHHcC--CcEEEEcCCcCCCCcc-ccCCeEEEECCCC---CCEEECCCCCEEEECCCCCHHHH
Confidence 4789999999988765 222 2478889999975432 1222689999865 555544 568999999999999
Q ss_pred HHhhhh
Q psy7003 592 MDYFDR 597 (1520)
Q Consensus 592 ~e~L~~ 597 (1520)
.+.+.+
T Consensus 115 ~~~l~~ 120 (459)
T 2bvf_A 115 VKEAAK 120 (459)
T ss_dssp HHHHHT
T ss_pred HHHHHH
Confidence 986654
No 107
>2bt6_A Adrenodoxin 1; ruthenium(II) bipyridyl complex, intramolecular electron TRA electron transport, metal-binding; HET: RUA; 1.50A {Bos taurus} SCOP: d.15.4.1 PDB: 1ayf_A 3n9y_C* 2jqr_B* 3na0_C*
Probab=63.15 E-value=6.1 Score=38.27 Aligned_cols=50 Identities=16% Similarity=0.360 Sum_probs=33.8
Q ss_pred cceEEEE---CCEEEEecccCCCCcchhHHHHhhhcccCcc--ccccC-CCccceeeeec
Q psy7003 296 STVRFTI---NGVVYIIGAEVPPGTRLVDFIRDYARLKGTK--YMCRE-GGCGVCTVTVT 349 (1520)
Q Consensus 296 ~~~~f~~---ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk--~~C~~-g~cGactV~v~ 349 (1520)
+|+++++ +|....+ ++++|+||++.+++. ++. -. ..|+. |.||.|-|-|.
T Consensus 5 ~m~~V~~~~~~g~~~~v--~~~~g~tLL~aa~~~-gi~-i~~~~~Cgg~G~CgtC~v~v~ 60 (108)
T 2bt6_A 5 DKITVHFINRDGETLTT--KGKIGDSLLDVVVQN-NLD-IDGFGACEGTLACSTCHLIFE 60 (108)
T ss_dssp CEEEEEEECTTSCEEEE--EEETTCBHHHHHHHT-TCC-CTTTTTTSSSSSBSTTEEECC
T ss_pred ceEEEEEECCCCCEEEE--EECCCChHHHHHHHc-CCC-CCcccCCCCCcCcCCCEEEEC
Confidence 3444444 5775555 467899999999864 332 33 57865 99999987764
No 108
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=62.23 E-value=8.4 Score=45.44 Aligned_cols=76 Identities=7% Similarity=0.093 Sum_probs=53.9
Q ss_pred cEEEEcCCHHHHHHHHhcCCC-CCCcEEEEecchhhhccCCCCCCeeeeCCCcccccceEEeC----CeEEEccccCHHH
Q psy7003 516 GIWYIVTEVREIFEIFDGLEA-NQTYMLVGGNTGYGVYRPRVPVDVYIQIRDIKELRQIFTRN----GYVLMGSATTLTE 590 (1520)
Q Consensus 516 ~~~~rPtSLeEal~ll~~~p~-~~~a~lVAGGTdLgv~~k~~~~~~lIdIs~I~EL~~I~~~~----~~L~IGA~vTlse 590 (1520)
..+++|.|.+|+.++++.... +-...+++||+.+.+-.. ....+|+++ |+.|..++ ..+++||++++.+
T Consensus 32 ~~vv~p~s~eel~~~v~~a~~~~ipv~vlGgGSNll~~d~--~~GvVI~l~----~~~i~v~~~~~~~~v~v~AG~~~~~ 105 (357)
T 3i99_A 32 AQLVVAESIDDLKALYCSAEWASLPKLIIGKGSNMLFTCH--YTGMIVVNR----LNGIEHQQDDDYHRLHVAGGEDWPS 105 (357)
T ss_dssp EEEEEECSHHHHHHHHSSSTTTTSCEEEESSCTTEEECSC--EEEEEEEEC----CCCEEEEECSSEEEEEEETTSBHHH
T ss_pred eEEEEECCHHHHHHHHHHHHHcCCCEEEECCCcCcccCCC--CCeEEEEcC----CCceEEeccCCceEEEEeCCCcHHH
Confidence 458999999999998874321 234778899998865432 125677764 45555432 3799999999999
Q ss_pred HHHhhhh
Q psy7003 591 AMDYFDR 597 (1520)
Q Consensus 591 l~e~L~~ 597 (1520)
+.+.+.+
T Consensus 106 l~~~a~~ 112 (357)
T 3i99_A 106 LVSWCVE 112 (357)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9986654
No 109
>2y5c_A Adrenodoxin-like protein, mitochondrial; electron transport, iron-sulfur cluster biogenesis; 1.70A {Homo sapiens}
Probab=62.17 E-value=7.5 Score=37.76 Aligned_cols=49 Identities=16% Similarity=0.337 Sum_probs=33.9
Q ss_pred ceEEEE---CCEEEEecccCCCCcchhHHHHhhhcccCccccccC-CCccceeeeec
Q psy7003 297 TVRFTI---NGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCRE-GGCGVCTVTVT 349 (1520)
Q Consensus 297 ~~~f~~---ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~~-g~cGactV~v~ 349 (1520)
|+++++ +|....+ ++++|.||++.+++ +|+. -...|+. |.||.|-|-|.
T Consensus 5 m~~v~~~~~~g~~~~~--~~~~g~tlL~aa~~-~gi~-i~~~C~g~G~CgtC~v~v~ 57 (109)
T 2y5c_A 5 VVNVVFVDRSGQRIPV--SGRVGDNVLHLAQR-HGVD-LEGACEASLACSTCHVYVS 57 (109)
T ss_dssp EEEEEEECTTSCEEEE--EEETTCBHHHHHHH-TTCC-CCCTTSSSSSCCTTEEEEC
T ss_pred cEEEEEEcCCCCEEEE--EECCCCcHHHHHHH-cCCC-CCcCCCCCcCcCccEEEEC
Confidence 444444 6776555 46789999999986 4443 3457876 99999987763
No 110
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=62.02 E-value=9.4 Score=46.91 Aligned_cols=75 Identities=13% Similarity=0.066 Sum_probs=52.4
Q ss_pred EEEEcCCHHHHHHHHh---cCCCCCCcEEEEecchhhhccC-CCCCCeeeeCCCcccccceEEe--CCeEEEccccCHHH
Q psy7003 517 IWYIVTEVREIFEIFD---GLEANQTYMLVGGNTGYGVYRP-RVPVDVYIQIRDIKELRQIFTR--NGYVLMGSATTLTE 590 (1520)
Q Consensus 517 ~~~rPtSLeEal~ll~---~~p~~~~a~lVAGGTdLgv~~k-~~~~~~lIdIs~I~EL~~I~~~--~~~L~IGA~vTlse 590 (1520)
..++|+|.+|+.++++ ++. -...+.+||+++.-..- ......+||++++ +.|+.+ +..+++||++++.+
T Consensus 48 ~vv~P~s~~dV~~~v~~a~~~~--~~v~vrGgGh~~~g~~~~~~~ggvvIdl~~m---~~i~vd~~~~~v~V~aG~~l~~ 122 (495)
T 3fw9_A 48 AIILPGSKEELSNTIRCIRKGS--WTIRLRSGGHSYEGLSYTSDTPFILIDLMNL---NRVSIDLESETAWVESGSTLGE 122 (495)
T ss_dssp EEECCCSHHHHHHHHHHHHTSS--CEEEEESSCCCTTCTTSCCSSCEEEEECTTC---CCEEEETTTTEEEEETTCBHHH
T ss_pred EEEecCCHHHHHHHHHHHHHcC--CeEEEECCCcCCCCccccCCCCeEEEECCCC---CcEEEeCCCCEEEEcCCCCHHH
Confidence 5789999999988765 222 24777899998743211 1112478999874 555544 56899999999999
Q ss_pred HHHhhh
Q psy7003 591 AMDYFD 596 (1520)
Q Consensus 591 l~e~L~ 596 (1520)
+.+.+.
T Consensus 123 l~~~l~ 128 (495)
T 3fw9_A 123 LYYAIT 128 (495)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 987554
No 111
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=61.91 E-value=7.7 Score=47.87 Aligned_cols=75 Identities=16% Similarity=0.280 Sum_probs=53.7
Q ss_pred EEEEcCCHHHHHHHHh---cCCCCCCcEEEEecchhhhccCCCCCCeeeeCCCcccccceEEe--CCeEEEccccCHHHH
Q psy7003 517 IWYIVTEVREIFEIFD---GLEANQTYMLVGGNTGYGVYRPRVPVDVYIQIRDIKELRQIFTR--NGYVLMGSATTLTEA 591 (1520)
Q Consensus 517 ~~~rPtSLeEal~ll~---~~p~~~~a~lVAGGTdLgv~~k~~~~~~lIdIs~I~EL~~I~~~--~~~L~IGA~vTlsel 591 (1520)
..+.|+|.+|+.++++ ++. -...+.+||+++........-..+||+++ |+.|+.+ +..+++||++++.++
T Consensus 58 ~vv~p~s~~dv~~~v~~a~~~~--~~~~vrggGh~~~g~~~~~~~gvvIdl~~---l~~i~~d~~~~~v~v~aG~~~~~l 132 (521)
T 2ipi_A 58 VVYVVHTADQVVDAVNQAMAAG--QRIAVRSGGHCFEGFVDDPAVRAVIDMSQ---MRQVFYDSGKRAFAVEPGATLGET 132 (521)
T ss_dssp EEEECSSHHHHHHHHHHHHHHT--CCEEEESSCCCTTCGGGCTTCCEEEECTT---CCCEEEETTTTEEEECTTSBHHHH
T ss_pred EEEEcCCHHHHHHHHHHHHHcC--CeEEEECCCcCCCCCcccCCCeEEEeccc---CCCeEEeCCCCEEEEeCCcCHHHH
Confidence 4689999999887664 222 24788899998765422112258999976 5566555 568999999999999
Q ss_pred HHhhh
Q psy7003 592 MDYFD 596 (1520)
Q Consensus 592 ~e~L~ 596 (1520)
.+.+.
T Consensus 133 ~~~l~ 137 (521)
T 2ipi_A 133 YRALY 137 (521)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88653
No 112
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=59.70 E-value=8.8 Score=47.39 Aligned_cols=75 Identities=15% Similarity=0.186 Sum_probs=53.4
Q ss_pred EEEEcCCHHHHHHHHh---cCCCCCCcEEEEecchhhhccCCCCCCeeeeCCCcccccceEEe--CCeEEEccccCHHHH
Q psy7003 517 IWYIVTEVREIFEIFD---GLEANQTYMLVGGNTGYGVYRPRVPVDVYIQIRDIKELRQIFTR--NGYVLMGSATTLTEA 591 (1520)
Q Consensus 517 ~~~rPtSLeEal~ll~---~~p~~~~a~lVAGGTdLgv~~k~~~~~~lIdIs~I~EL~~I~~~--~~~L~IGA~vTlsel 591 (1520)
..+.|+|.+|+.++++ ++. -...+.+||+++........-..+||+++ |+.|+.+ +..+++|+++++.++
T Consensus 60 ~vv~p~s~~dv~~~v~~a~~~~--~~~~v~ggGh~~~g~~~~~~~gvvIdl~~---m~~i~~d~~~~~v~v~aG~~~~~l 134 (523)
T 2wdx_A 60 YIHLVGSTQQVADAVEETVRTG--KRVAVRSGGHCFEDFVDNPDVKVIIDMSL---LTEIAYDPSMNAFLIEPGNTLSEV 134 (523)
T ss_dssp EEEECSSHHHHHHHHHHHHHHT--CCEEEESSCCCSSSSSSSTTCCEEEECTT---CCCEEEETTTTEEEECTTCBHHHH
T ss_pred EEEEeCCHHHHHHHHHHHHHcC--CcEEEEcCCCCCCCCccCCCCeEEEEccc---CCCEEEcCCCCEEEEcCCCCHHHH
Confidence 4789999999887764 222 24778899998764322111258999976 4555554 568999999999999
Q ss_pred HHhhh
Q psy7003 592 MDYFD 596 (1520)
Q Consensus 592 ~e~L~ 596 (1520)
.+.+.
T Consensus 135 ~~~l~ 139 (523)
T 2wdx_A 135 YEKLY 139 (523)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98664
No 113
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=58.80 E-value=12 Score=46.05 Aligned_cols=74 Identities=9% Similarity=0.127 Sum_probs=52.9
Q ss_pred EEEEcCCHHHHHHHHh---cCCCCCCcEEEEecchhhhccCCCCCCeeeeCCCcccccceEEe--CCeEEEccccCHHHH
Q psy7003 517 IWYIVTEVREIFEIFD---GLEANQTYMLVGGNTGYGVYRPRVPVDVYIQIRDIKELRQIFTR--NGYVLMGSATTLTEA 591 (1520)
Q Consensus 517 ~~~rPtSLeEal~ll~---~~p~~~~a~lVAGGTdLgv~~k~~~~~~lIdIs~I~EL~~I~~~--~~~L~IGA~vTlsel 591 (1520)
..+.|+|.+|+.++++ ++. -...+.+||+++........-..+||++++ +.|+.+ +..+++||++++.++
T Consensus 37 ~vv~P~s~~dV~~~v~~a~~~~--~~v~vrggGh~~~g~~~~~~~gvvIdl~~l---~~i~vd~~~~~v~v~aG~~~~~l 111 (501)
T 3pop_A 37 EFFLPATPDDVVASLQKAVTEG--RGVACRSGGHCGQDFVGTPRRDLVLDLHNL---HAIGPAADGAGVRVGSGATVDQV 111 (501)
T ss_dssp EEEECSSHHHHHHHHHHHHHTT--CCEEEESSCCCSSSTTTSSCCSEEEECTTC---CCEEECTTSSSEEEETTCBHHHH
T ss_pred EEEEeCCHHHHHHHHHHHHHcC--CeEEEEeCCccCCCccccCCCEEEEEeccc---CCeEEcCCCCEEEEECCcCHHHH
Confidence 4789999999987765 332 247788999987543321112589998875 555554 568999999999999
Q ss_pred HHhh
Q psy7003 592 MDYF 595 (1520)
Q Consensus 592 ~e~L 595 (1520)
.+.+
T Consensus 112 ~~~l 115 (501)
T 3pop_A 112 QKAL 115 (501)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8866
No 114
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=57.36 E-value=17 Score=44.60 Aligned_cols=77 Identities=13% Similarity=0.214 Sum_probs=53.3
Q ss_pred cEEEEcCCHHHHHHHHh---cCCCCCCcEEEEecchhhhccCC--CCCCeeeeCCCcccccce-EEe--CCeEEEccccC
Q psy7003 516 GIWYIVTEVREIFEIFD---GLEANQTYMLVGGNTGYGVYRPR--VPVDVYIQIRDIKELRQI-FTR--NGYVLMGSATT 587 (1520)
Q Consensus 516 ~~~~rPtSLeEal~ll~---~~p~~~~a~lVAGGTdLgv~~k~--~~~~~lIdIs~I~EL~~I-~~~--~~~L~IGA~vT 587 (1520)
...++|+|.+|+.++++ ++. -...+++|||.+.+-... ..-.++||+++ |+.| +.+ +..++++|+++
T Consensus 58 ~~vv~P~s~~ev~~~v~~a~~~~--~pv~~~g~G~~~~~g~~~~~~~~gvvidl~~---m~~i~~id~~~~~v~v~aGv~ 132 (520)
T 1wvf_A 58 SAAVTATTVEQVQGVVKICNEHK--IPIWTISTGRNFGYGSAAPVQRGQVILDLKK---MNKIIKIDPEMCYALVEPGVT 132 (520)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHT--CCEEEESSCCCTTTTTTSCSSTTCEEEECTT---CCCEEEEETTTTEEEECTTCC
T ss_pred CEEEecCCHHHHHHHHHHHHHCC--CcEEEEcCCCCCCCCCCCCCCCCeEEEECCC---CCceEEECCCCCEEEECCCCC
Confidence 35789999999988765 222 135666799987631101 11268999976 5555 444 56899999999
Q ss_pred HHHHHHhhhh
Q psy7003 588 LTEAMDYFDR 597 (1520)
Q Consensus 588 lsel~e~L~~ 597 (1520)
+.++.+.+..
T Consensus 133 ~~~l~~~l~~ 142 (520)
T 1wvf_A 133 FGQMYDYIQE 142 (520)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999987664
No 115
>1doi_A 2Fe-2S ferredoxin; halophilic protein, redox protein, iron-sulfur, electron transport; 1.90A {Haloarcula marismortui} SCOP: d.15.4.1 PDB: 1e0z_A* 1e10_A
Probab=57.15 E-value=5 Score=40.58 Aligned_cols=48 Identities=19% Similarity=0.410 Sum_probs=34.9
Q ss_pred ceEEEECCE-EEEecccCCCCcchhHHHHhhhcccCccccccCCCccceeeeecc
Q psy7003 297 TVRFTINGV-VYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTS 350 (1520)
Q Consensus 297 ~~~f~~ng~-~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~~g~cGactV~v~~ 350 (1520)
+++|..||. .. +++++.|||+.++. +|+. -...|+.|.||.|.|.|.+
T Consensus 29 ~i~i~~~g~~~v----~v~~g~tlL~aa~~-~Gi~-i~~~C~~G~CgtC~v~v~~ 77 (128)
T 1doi_A 29 DMDLDDEDYGSL----EVNEGEYILEAAEA-QGYD-WPFSCRAGACANCAAIVLE 77 (128)
T ss_dssp HSCCCTTTEEEE----ECCTTSCHHHHHHH-TTCC-CCCSSSSSSSSTTEEEEEE
T ss_pred EEEEEeCCcEEE----EECCCCcHHHHHHH-cCCC-CccCCCccCCCCCEeEEec
Confidence 455666775 33 45789999999986 4443 4557999999999988743
No 116
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=57.12 E-value=9.3 Score=46.89 Aligned_cols=74 Identities=12% Similarity=0.129 Sum_probs=53.1
Q ss_pred EEEEcCCHHHHHHHHh---cCCCCCCcEEEEecchhhhccCC-CCCCeeeeCCCcccccceEEe-CCeEEEccccCHHHH
Q psy7003 517 IWYIVTEVREIFEIFD---GLEANQTYMLVGGNTGYGVYRPR-VPVDVYIQIRDIKELRQIFTR-NGYVLMGSATTLTEA 591 (1520)
Q Consensus 517 ~~~rPtSLeEal~ll~---~~p~~~~a~lVAGGTdLgv~~k~-~~~~~lIdIs~I~EL~~I~~~-~~~L~IGA~vTlsel 591 (1520)
..++|+|.+|+.++++ ++. -...+.+||+++....-. ..-..+||++++ +.|+.+ +..+++||++++.++
T Consensus 45 ~vv~p~s~~dv~~~v~~a~~~~--~~~~v~ggGh~~~~~~~~~~~~gvvIdl~~l---~~i~~d~~~~v~v~aG~~~~~l 119 (503)
T 1zr6_A 45 AIAIPRSTEDIAAAVQCGLDAG--VQISAKGGGHSYGSYGFGGEDGHLMLELDRM---YRVSVDDNNVATIQGGARLGYT 119 (503)
T ss_dssp EEEECCSHHHHHHHHHHHHHHT--CCEEEESSCCCTTCTTTTSSSSCEEEECTTC---CCEEECTTSCEEEETTCBHHHH
T ss_pred EEEEeCCHHHHHHHHHHHHHcC--CeEEEECCCcCCCCCcccCCCCcEEEECccC---CCEEECCCCeEEEecCCCHHHH
Confidence 4789999999888764 222 247888999998643211 112589999875 455444 568999999999999
Q ss_pred HHhh
Q psy7003 592 MDYF 595 (1520)
Q Consensus 592 ~e~L 595 (1520)
.+.+
T Consensus 120 ~~~l 123 (503)
T 1zr6_A 120 ALEL 123 (503)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9866
No 117
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=56.64 E-value=10 Score=46.79 Aligned_cols=77 Identities=10% Similarity=0.028 Sum_probs=53.5
Q ss_pred cEEEEcCCHHHHHHHHh---cCCCCCCcEEEEecchhhhccC-CCCCCeeeeCCCcccccceEE--eCCeEEEccccCHH
Q psy7003 516 GIWYIVTEVREIFEIFD---GLEANQTYMLVGGNTGYGVYRP-RVPVDVYIQIRDIKELRQIFT--RNGYVLMGSATTLT 589 (1520)
Q Consensus 516 ~~~~rPtSLeEal~ll~---~~p~~~~a~lVAGGTdLgv~~k-~~~~~~lIdIs~I~EL~~I~~--~~~~L~IGA~vTls 589 (1520)
...++|+|.+|+.++++ ++. -...+.+||+++....- ......+||++++ +.|+. ++..+++||++++.
T Consensus 55 ~~vv~P~s~~dV~~~v~~a~~~~--~~v~vrggGh~~~g~~~~~~~~gvvIdl~~l---~~i~vd~~~~~v~V~aG~~l~ 129 (518)
T 3vte_A 55 LVIVTPSNNSHIQATILCSKKVG--LQIRTRSGGHDAEGMSYISQVPFVVVDLRNM---HSIKIDVHSQTAWVEAGATLG 129 (518)
T ss_dssp SEEECCCSHHHHHHHHHHHHHHT--CEEEEESSCCCTTCTTTCCSSSEEEEECTTC---CCEEEETTTTEEEEETTCBHH
T ss_pred CEEEEeCCHHHHHHHHHHHHHcC--CcEEEECCCcCCCCCccCCCCCeEEEECCCC---ceeEEeCCCCEEEEeCCccHH
Confidence 35789999999987765 222 24777899998753321 1122578999874 55554 45689999999999
Q ss_pred HHHHhhhh
Q psy7003 590 EAMDYFDR 597 (1520)
Q Consensus 590 el~e~L~~ 597 (1520)
++.+.+.+
T Consensus 130 ~l~~~l~~ 137 (518)
T 3vte_A 130 EVYYWINE 137 (518)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99885543
No 118
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A*
Probab=56.41 E-value=8.5 Score=43.64 Aligned_cols=69 Identities=16% Similarity=0.153 Sum_probs=51.7
Q ss_pred EEEcCCHHHHHHHHhcCCCCCCcEEEEecchhhhccCCCCC-CeeeeCCCcccccceEEeCCeEEEccccCHHHHHHhhh
Q psy7003 518 WYIVTEVREIFEIFDGLEANQTYMLVGGNTGYGVYRPRVPV-DVYIQIRDIKELRQIFTRNGYVLMGSATTLTEAMDYFD 596 (1520)
Q Consensus 518 ~~rPtSLeEal~ll~~~p~~~~a~lVAGGTdLgv~~k~~~~-~~lIdIs~I~EL~~I~~~~~~L~IGA~vTlsel~e~L~ 596 (1520)
++.|+|.+|+.+++ ..| ..+++|||.+.+... ... ..+|++++ |+.|..+ + ++||++++.++.+.+.
T Consensus 25 vv~p~s~edv~~~v-~ip----v~v~GgGsnll~~d~-~~~~GvVI~l~~---~~~I~vd-~--~v~aG~~~~~l~~~~~ 92 (268)
T 2gqt_A 25 LWTVETREELKRAT-EAP----YRVLGNGSNLLVLDE-GVPERVIRLAGE---FQTYDLK-G--WVGAGTLLPLLVQEAA 92 (268)
T ss_dssp EEEECSHHHHHHHT-TSC----EEECSSSSSEEECTT-CCSSEEEEECGG---GGCBCTT-S--EEETTSBHHHHHHHHH
T ss_pred EEEeCCHHHHHHHh-CCC----eEEcCCCcCceecCC-CcCCeEEEEcCC---CCCcEEc-C--EEECCCCHHHHHHHHH
Confidence 99999999999998 444 888999998875322 112 47888864 5555544 3 9999999999998766
Q ss_pred hc
Q psy7003 597 RT 598 (1520)
Q Consensus 597 ~~ 598 (1520)
+.
T Consensus 93 ~~ 94 (268)
T 2gqt_A 93 RA 94 (268)
T ss_dssp HT
T ss_pred Hc
Confidence 53
No 119
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=55.71 E-value=13 Score=46.16 Aligned_cols=80 Identities=6% Similarity=0.081 Sum_probs=53.3
Q ss_pred EEEEcCCHHHHHHHHhcCCC-CCCcEEEEecchhhhc-cCCC---CCCeeeeC-CCcccccceEE--eCCeEEEccccCH
Q psy7003 517 IWYIVTEVREIFEIFDGLEA-NQTYMLVGGNTGYGVY-RPRV---PVDVYIQI-RDIKELRQIFT--RNGYVLMGSATTL 588 (1520)
Q Consensus 517 ~~~rPtSLeEal~ll~~~p~-~~~a~lVAGGTdLgv~-~k~~---~~~~lIdI-s~I~EL~~I~~--~~~~L~IGA~vTl 588 (1520)
..+.|+|.+|+.++++...+ +...++++||+++.-. .... ....+||+ +++..+ .+.. +...++++|++++
T Consensus 38 ~vv~P~s~~ev~~~v~~a~~~~~~v~~~G~G~s~~~~~l~~~~~~~~gvvIdl~~~l~~i-~vd~~~~~~~v~v~aGv~l 116 (561)
T 2i0k_A 38 WVCSPKTPQDVVRLANWAHEHDYKIRPRGAMAGWTPLTVEKGANVEKVILADTMTHLNGI-TVNTGGPVATVTAGAGASI 116 (561)
T ss_dssp EEECCSSHHHHHHHHHHHHHHTCEEEEECCCCCCCTTSSCTTCCCTTEEEEECTTTSCCE-EEECCSSSCEEEEETTSBH
T ss_pred EEEecCCHHHHHHHHHHHHHCCCcEEEECCCCCcccccccCCCcCCCeEEEechhhCCce-EecCcCCccEEEEcCCCCH
Confidence 47899999999887753110 1247788999987421 1111 12478998 665444 3333 3468999999999
Q ss_pred HHHHHhhhh
Q psy7003 589 TEAMDYFDR 597 (1520)
Q Consensus 589 sel~e~L~~ 597 (1520)
.+|.+.+..
T Consensus 117 ~~L~~~l~~ 125 (561)
T 2i0k_A 117 EAIVTELQK 125 (561)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999987654
No 120
>2w3s_B Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 1jrp_B* 2w3r_B* 1jro_B* 2w54_B* 2w55_B*
Probab=55.22 E-value=87 Score=40.57 Aligned_cols=122 Identities=15% Similarity=0.098 Sum_probs=73.0
Q ss_pred cceEEEEEEcCCCeEEEEecCcccCcchHHHHHHHHHHHhCCCCCcEEEecCCCCCCCCCCCCcccccccc---hHHHHH
Q psy7003 1316 VSYAILSVFRRDATVAITTSGIEIGQGLHTKVAQACAYELGIPIEKIVLKPAQNNIFPNAANTGGSTASDN---AARCIL 1392 (1520)
Q Consensus 1316 ~~~a~v~v~~~DGsV~i~~g~~e~GQG~~T~~aQiaA~~Lgip~e~I~v~~~dT~~~p~~~~t~gS~~t~~---~g~Av~ 1392 (1520)
...++.. ++.|| ++|.++. |+.+ .+.+.+|+.||||.++|+|.. |.-++..|++.+.. ...|+.
T Consensus 178 p~~~~A~-~~~~~-l~v~~st----Q~p~-~~r~~vA~~Lglp~~~VrV~~------~~vGGgFG~K~~~~~~~~~~aA~ 244 (777)
T 2w3s_B 178 GQAALAL-PAEGG-VVIHCSS----QHPS-EIQHKVAHALGLAFHDVRVEM------RRMGGGFGGKESQGNHLAIACAV 244 (777)
T ss_dssp CCEEEEE-EETTE-EEEEESC----SCHH-HHHHHHHHHHTCCGGGEEEEE------CCCSCCTTTTTTTTHHHHHHHHH
T ss_pred CCeEEEE-EECCc-cEEEECC----cCHH-HHHHHHHHHHCCCHHHEEEEe------CCCCCCCCcCccccchHHHHHHH
Confidence 3455555 45677 9999876 5554 567788999999999999984 45578888887533 222322
Q ss_pred HHHHHHHHHhhhhhhcCCCHHHHHHHHhhcCceeEEEEEeeccCCCCCCCccccceEEEEEEEEECCCCcEEEEEEEEEE
Q psy7003 1393 LCCQELKTRLMPYMDKGKSWEKTISDAFERGVDLQVTKSVSSQQTPDLLPMYTIPTAAATEVEVDLLTGQHQILRVDILE 1472 (1520)
Q Consensus 1393 ~Ac~~l~~rl~~~~~~~~~w~~~~~~a~~~gv~l~~~~~~~~~~~~~~~~~~~~~ga~~aEVEVD~~TG~v~V~r~~~~~ 1472 (1520)
+++++. +|++= -.+-++-..... +-....+-.++-+| ..|++.=.++.+..
T Consensus 245 -~A~~~g---rPVkl-~~tR~e~~~~~~-----------------------~R~~~~~~~~~g~d-~dG~i~a~~~~~~~ 295 (777)
T 2w3s_B 245 -AARATG---RPCKM-RYDRDDDMVITG-----------------------KRHDFRIRYRIGAD-ASGKLLGADFVHLA 295 (777)
T ss_dssp -HHHHHS---SCEEE-ECCHHHHHHHSC-----------------------CCCCEEEEEEEEEC-TTSCEEEEEEEEEE
T ss_pred -HHHHhC---CCEEE-EecHHHHhhhcC-----------------------CCCceEEEEEEEEC-CCCCEEEEEEEEEE
Confidence 222221 22210 011111111100 00112334467788 47999999999999
Q ss_pred ecCcccC
Q psy7003 1473 DTGQSIN 1479 (1520)
Q Consensus 1473 D~G~~IN 1479 (1520)
|+|..-+
T Consensus 296 d~Ga~~~ 302 (777)
T 2w3s_B 296 RCGWSAD 302 (777)
T ss_dssp ECCSSCT
T ss_pred cCCcccc
Confidence 9998753
No 121
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=54.59 E-value=13 Score=46.65 Aligned_cols=79 Identities=11% Similarity=0.118 Sum_probs=53.9
Q ss_pred EEEEcCCHHHHHHHHh---cCCCCCCcEEEEecchhhhc-cCCC--CCCeeeeCCCcccccceEEeCCeEEEccccCHHH
Q psy7003 517 IWYIVTEVREIFEIFD---GLEANQTYMLVGGNTGYGVY-RPRV--PVDVYIQIRDIKELRQIFTRNGYVLMGSATTLTE 590 (1520)
Q Consensus 517 ~~~rPtSLeEal~ll~---~~p~~~~a~lVAGGTdLgv~-~k~~--~~~~lIdIs~I~EL~~I~~~~~~L~IGA~vTlse 590 (1520)
..++|+|.+|+.++++ ++. -...+.+|||.+.-. .... .-.++||++++..+..+..++..++++|++++.+
T Consensus 140 ~vv~P~s~eeV~~iv~~a~~~~--~pv~~~GgGts~~gg~~~~~~~~g~vvidl~~mn~I~~id~~~~~v~v~aGv~~~~ 217 (584)
T 2uuu_A 140 LIVLPHSHEEVERLVQLAHKYN--VVIIPMGGGSNIVGAIEPVSNERFTVSIDMRRMNKVLWVDRREMTACIQVGIMGPE 217 (584)
T ss_dssp EEECCCSHHHHHHHHHHHHHHT--CEEEEESSCCCSSCTTSCCCCSSCEEEEECTTCCCEEEEETTTTEEEEETTCBHHH
T ss_pred EEEeCCCHHHHHHHHHHHHHcC--CeEEEEeCCCCCCCCCcccCCCCCEEEEECCCCCccEEEcCCCCEEEECCCCcHHH
Confidence 4789999999988775 222 247778999997522 1111 1246789876544333333446899999999999
Q ss_pred HHHhhhh
Q psy7003 591 AMDYFDR 597 (1520)
Q Consensus 591 l~e~L~~ 597 (1520)
+.+.+..
T Consensus 218 l~~~l~~ 224 (584)
T 2uuu_A 218 LEKQLHK 224 (584)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9987765
No 122
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=54.37 E-value=10 Score=43.49 Aligned_cols=48 Identities=27% Similarity=0.551 Sum_probs=34.3
Q ss_pred eEEEEC---CEEEEecccCCCCcchhHHHHhhhcccCccccccCCCccceeeeec
Q psy7003 298 VRFTIN---GVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVT 349 (1520)
Q Consensus 298 ~~f~~n---g~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~~g~cGactV~v~ 349 (1520)
.+++++ |...++ +++++.||++.+++ +|+. -...|++|.||.|.|.|.
T Consensus 4 ~~v~~~~~~~~~~~~--~~~~g~tll~a~~~-~gi~-i~~~C~~g~Cg~C~v~v~ 54 (338)
T 1krh_A 4 HQVALQFEDGVTRFI--CIAQGETLSDAAYR-QQIN-IPMDCREGECGTCRAFCE 54 (338)
T ss_dssp EEEEEECTTSCEEEE--EECTTCCHHHHHHH-TTCC-CSCSCSSSSSCTTEEEEE
T ss_pred eEEEEEEcCCCcEEE--EeCCCCcHHHHHHH-cCCC-cccCCCCcCCCCCEEEEe
Confidence 344444 555555 46789999999985 4443 455799999999998873
No 123
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=54.33 E-value=14 Score=46.33 Aligned_cols=77 Identities=16% Similarity=0.138 Sum_probs=53.5
Q ss_pred EEEEcCCHHHHHHHHh---cCCCCCCcEEEEecchhhhc-cCCC----CCCeeeeCCCcccccce-EEe-CCeEEEcccc
Q psy7003 517 IWYIVTEVREIFEIFD---GLEANQTYMLVGGNTGYGVY-RPRV----PVDVYIQIRDIKELRQI-FTR-NGYVLMGSAT 586 (1520)
Q Consensus 517 ~~~rPtSLeEal~ll~---~~p~~~~a~lVAGGTdLgv~-~k~~----~~~~lIdIs~I~EL~~I-~~~-~~~L~IGA~v 586 (1520)
..++|.|.+|+.++++ ++. -...+.+|||++.-. .... +..++||++++ +.| ..+ +..++++|++
T Consensus 48 ~Vv~P~s~~eV~~iv~~a~~~~--~~v~~~GgGt~~~G~~~~~~~~~~r~gvvIdl~rm---n~I~~id~~~~v~v~aGv 122 (571)
T 1f0x_A 48 AVVFPGSLLELWRVLKACVTAD--KIILMQAANTGLTEGSTPNGNDYDRDVVIISTLRL---DKLHVLGKGEQVLAYPGT 122 (571)
T ss_dssp EEECCSSHHHHHHHHHHHHHTT--CEEEEESSCCCSSSTTSCCBSCCSSCEEEEECTTC---CCEEEETTTTEEEECTTC
T ss_pred EEEeeCCHHHHHHHHHHHHHcC--CCEEEECCCcCCCCCccCCCcCCcCceEEEECccc---CCceeECCCCeEEEcCCc
Confidence 4689999999988775 332 236677999997522 1111 12578998874 555 233 4589999999
Q ss_pred CHHHHHHhhhhc
Q psy7003 587 TLTEAMDYFDRT 598 (1520)
Q Consensus 587 Tlsel~e~L~~~ 598 (1520)
++.++.+.+...
T Consensus 123 ~l~~L~~~l~~~ 134 (571)
T 1f0x_A 123 TLYSLEKALKPL 134 (571)
T ss_dssp BHHHHHHHHGGG
T ss_pred CHHHHHHHHHhc
Confidence 999999977653
No 124
>3hrd_B Nicotinate dehydrogenase medium molybdopterin subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=54.12 E-value=19 Score=41.90 Aligned_cols=58 Identities=16% Similarity=0.168 Sum_probs=43.1
Q ss_pred CCCCeeEEEEeCC-eEEEEeCCCCh-----HHHHHHHHHHhCCCCCcEEEEe------cccCCCCCCCCC
Q psy7003 970 MEGQTALCVPSED-GVDIYAASQWV-----TLVQESVAGVLGLPNNRVNVKT------RRIGGGYGAKLS 1027 (1520)
Q Consensus 970 mEp~~a~A~~~ed-~l~V~~sTQ~p-----~~vq~~vA~~LGlp~~kVrV~~------~~vGGgFG~K~~ 1027 (1520)
..+.++......| .++|+++.+-. +.+.+.+|+.||+|.++|+|.. ++-+|.+|++..
T Consensus 21 ~~~~~a~v~i~~DG~V~v~~g~~emGQG~~T~laQIaAe~Lgi~~e~V~v~~~DT~~~p~~~~T~gSrst 90 (330)
T 3hrd_B 21 PNPAAAFVEIHGDGSANVMFGAADIGQGSGTAMAQIAAEELGLDYEKIHVTWGDTMVTPDGGATSASRQT 90 (330)
T ss_dssp CCCEEEEEEECTTSCEEEEECCCCSSSCHHHHHHHHHHHHHTCCGGGEEEEESBTTTSCCCCCSCTTCHH
T ss_pred CCcceEEEEEeCCCeEEEEECCCCCCCCHHHHHHHHHHHHhCCCHHHEEEEecCCCCCCCCCCCcchHhH
Confidence 4455666666655 59999987544 3557888999999999999975 455777877765
No 125
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=52.12 E-value=17 Score=46.10 Aligned_cols=79 Identities=11% Similarity=0.052 Sum_probs=54.5
Q ss_pred EEEEcCCHHHHHHHHh---cCCCCCCcEEEEecchhhhccC--C--CCCCeeeeCCCcccccceEEeCCeEEEccccCHH
Q psy7003 517 IWYIVTEVREIFEIFD---GLEANQTYMLVGGNTGYGVYRP--R--VPVDVYIQIRDIKELRQIFTRNGYVLMGSATTLT 589 (1520)
Q Consensus 517 ~~~rPtSLeEal~ll~---~~p~~~~a~lVAGGTdLgv~~k--~--~~~~~lIdIs~I~EL~~I~~~~~~L~IGA~vTls 589 (1520)
-..+|.|.+|..++++ ++. -.....+|||++.--.- . ....++||+++...+..|..++..+++++++++.
T Consensus 208 aVV~P~s~eeV~~iv~~A~~~~--ipVvprGgGTsl~GG~~~~~~~~~ggVvLDlsrMnrIleiD~~~~~atVeaGv~~~ 285 (658)
T 4bby_A 208 IVLWPTCHDDVVKIVNLACKYN--LCIIPIGGGTSVSYGLMCPADETRTIISLDTSQMNRILWVDENNLTAHVEAGITGQ 285 (658)
T ss_dssp EEEECCSHHHHHHHHHHHHHTT--CEEEEESSCCCSSSTTCCCTTCCSCEEEEECTTCCCEEEEETTTTEEEEETTCBHH
T ss_pred EEEeeCCHHHHHHHHHHHHHCC--CeEEEECCCcCCCCCCCCCCCCCCcEEEEECccCCCcEEEcCCCCEEEEecCchHH
Confidence 4689999999988876 333 12555689998743211 1 1123678988865444445566799999999999
Q ss_pred HHHHhhhh
Q psy7003 590 EAMDYFDR 597 (1520)
Q Consensus 590 el~e~L~~ 597 (1520)
++.+.++.
T Consensus 286 ~L~~~L~~ 293 (658)
T 4bby_A 286 ELERQLKE 293 (658)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99987664
No 126
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=49.25 E-value=24 Score=43.80 Aligned_cols=76 Identities=11% Similarity=0.200 Sum_probs=52.4
Q ss_pred EEEEcCCHHHHHHHHh---cCCCCCCcEEEEecchhhhccCC--CCCCeeeeC-CCcccccce-EEe--CCeEEEccccC
Q psy7003 517 IWYIVTEVREIFEIFD---GLEANQTYMLVGGNTGYGVYRPR--VPVDVYIQI-RDIKELRQI-FTR--NGYVLMGSATT 587 (1520)
Q Consensus 517 ~~~rPtSLeEal~ll~---~~p~~~~a~lVAGGTdLgv~~k~--~~~~~lIdI-s~I~EL~~I-~~~--~~~L~IGA~vT 587 (1520)
..+.|.|.+|+.++++ ++. -...+.+|||.+.+--.. ....++||+ ++ |+.| +.+ +..++++++++
T Consensus 73 ~Vv~P~s~~eV~~iv~~a~~~~--~pv~~~g~Gt~~~~gg~~p~~~~gvvidl~~~---mn~il~id~~~~~v~v~aGv~ 147 (560)
T 1e8g_A 73 AIVAPRNVADVQSIVGLANKFS--FPLWPISIGRNSGYGGAAPRVSGSVVLDMGKN---MNRVLEVNVEGAYCVVEPGVT 147 (560)
T ss_dssp EEECCSSHHHHHHHHHHHHHHT--CCEEEESSCCCTTTTTTCCSSTTCEEEECTTT---CCCEEEEETTTTEEEECTTCB
T ss_pred EEEeCCCHHHHHHHHHHHHHcC--CcEEEecCCCcCCcCCCCCCcCCEEEEEchHh---cCCeEEEcCCCCEEEEeCCCC
Confidence 4789999999988775 222 125556799987531111 112589999 65 4555 444 56899999999
Q ss_pred HHHHHHhhhh
Q psy7003 588 LTEAMDYFDR 597 (1520)
Q Consensus 588 lsel~e~L~~ 597 (1520)
+.++.+.+..
T Consensus 148 ~~~l~~~l~~ 157 (560)
T 1e8g_A 148 YHDLHNYLEA 157 (560)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999987664
No 127
>3kwl_A Uncharacterized protein; putative oxidoreductase, multidomain, unknown function; 1.94A {Helicobacter pylori}
Probab=48.81 E-value=28 Score=42.99 Aligned_cols=77 Identities=14% Similarity=0.172 Sum_probs=50.8
Q ss_pred cCCCCCCCceEEEEEE---CC--------EEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEECCccCCC
Q psy7003 11 LPRLFSDTSSTVRFTI---NG--------VVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTSSHPVT 79 (1520)
Q Consensus 11 ~~~~~~~~~~~~~~~i---ng--------~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~~~~~~~~ 79 (1520)
.|+-+...+++++|.| |. +.|++ ++++++|+||.|.. .. ...|++ +|.+.|||.
T Consensus 14 ~~~~~~~~~~~~~~~i~R~~p~~~~~p~~~~y~v--~~~~~~~vLd~L~~-ik----~l~fr~----sCam~ING~---- 78 (514)
T 3kwl_A 14 VPRGSHMSVLKLHVKVFRFETNKDYNPAYESYFL--EYQEDQYLLDLLKQ-LK----GVSYSE----NIALKINQI---- 78 (514)
T ss_dssp ---CCCCCCCEEEEEEEECBTTSCSCCEEEEEEE--ECCTTCBHHHHHTT-ST----TCCCCS----SCCEEETTE----
T ss_pred CCCCccccceEEEEEEEEeCCCCCCCCceEEEEE--eCCCCCcHHHHHHH-hh----hCeeec----cceEEECCE----
Confidence 3556666677788877 31 46677 68999999999954 23 566887 899999996
Q ss_pred Cccccccccc---chhhHHhcCCcEEEEecCCCC
Q psy7003 80 GVDSTYSVNA---CLVLVHMCGGWAITTVEGLGS 110 (1520)
Q Consensus 80 ~~~~~~~v~s---cl~~~~~~~g~~i~T~eg~~~ 110 (1520)
+..+ |...+-.. |. ..|||-|.+
T Consensus 79 ------~~la~t~~~~~~~~~-~~-~i~iePl~~ 104 (514)
T 3kwl_A 79 ------AVFEDAKVSDLVAFF-SK-EWVLDPLSK 104 (514)
T ss_dssp ------EECSCCBHHHHHHHH-CS-EEEEECSCS
T ss_pred ------ehhhhhhHHHHhhcc-CC-cEEEEECCC
Confidence 5555 22222222 44 457999975
No 128
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=44.67 E-value=23 Score=43.71 Aligned_cols=78 Identities=10% Similarity=0.083 Sum_probs=52.9
Q ss_pred EEEEcCCHHHHHHHHh---c--C-CCCCCcEEEEecchhhhccCCCCCCeeeeCCCccccc---ceEEe--CCeEEEccc
Q psy7003 517 IWYIVTEVREIFEIFD---G--L-EANQTYMLVGGNTGYGVYRPRVPVDVYIQIRDIKELR---QIFTR--NGYVLMGSA 585 (1520)
Q Consensus 517 ~~~rPtSLeEal~ll~---~--~-p~~~~a~lVAGGTdLgv~~k~~~~~~lIdIs~I~EL~---~I~~~--~~~L~IGA~ 585 (1520)
..++|+|.+|+.++++ + + + -...+.+|||++..... ..-..+||++++..+. .++.+ +..+++||+
T Consensus 71 ~vv~P~s~~ev~~~v~~a~~~~~~~--~~v~~~G~G~~~~g~~~-~~~gvvi~l~~m~~i~~~~~~~~d~~~~~v~v~aG 147 (534)
T 1w1o_A 71 AVLYPSSTGDLVALLSAANSTPGWP--YTIAFRGRGHSLMGQAF-APGGVVVNMASLGDAAAPPRINVSADGRYVDAGGE 147 (534)
T ss_dssp EEECCSSHHHHHHHHHHHHHCTTCC--CCEEEESSCCCSSSTTC-CTTSEEEEGGGGGCSSSSCSEEECTTSSEEEEETT
T ss_pred EEEecCCHHHHHHHHHHHHhcCCCC--ceEEEECCCCCCCCCcC-CCCeEEEECccccccccCccEEEcCCCCEEEECCC
Confidence 4689999999988765 2 2 2 24677899999763321 1126899987654431 13443 458999999
Q ss_pred cCHHHHHHhhhh
Q psy7003 586 TTLTEAMDYFDR 597 (1520)
Q Consensus 586 vTlsel~e~L~~ 597 (1520)
+++.++.+.+.+
T Consensus 148 v~~~~l~~~~~~ 159 (534)
T 1w1o_A 148 QVWIDVLRASLA 159 (534)
T ss_dssp CBHHHHHHHHHT
T ss_pred cCHHHHHHHHHH
Confidence 999999886553
No 129
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=42.92 E-value=18 Score=45.00 Aligned_cols=78 Identities=6% Similarity=0.005 Sum_probs=51.5
Q ss_pred EEEEcCCHHHHHHHHhcCCC-CCCcEEEEecchhhhccC-CC-C--CCeeeeCC-CcccccceEEeC----CeEEEcccc
Q psy7003 517 IWYIVTEVREIFEIFDGLEA-NQTYMLVGGNTGYGVYRP-RV-P--VDVYIQIR-DIKELRQIFTRN----GYVLMGSAT 586 (1520)
Q Consensus 517 ~~~rPtSLeEal~ll~~~p~-~~~a~lVAGGTdLgv~~k-~~-~--~~~lIdIs-~I~EL~~I~~~~----~~L~IGA~v 586 (1520)
..+.|+|.+|+.++++...+ +-..++++||+++..... .+ . -.++||++ ++. .|+.+. ..+++||++
T Consensus 32 ~vv~P~s~eEV~~~Vk~A~~~~~pv~v~GgGhs~~~l~~~gG~~~~~GVvIdls~~Ln---~I~vD~~~~~~tVtV~AGv 108 (540)
T 3js8_A 32 WTCAPRSADEVVKVANWAKDNGYKVRARGMMHNWSPLTLAAGVSCPAVVLLDTTRYLT---AMSIDASGPVAKVTAQAGI 108 (540)
T ss_dssp EEECCSSHHHHHHHHHHHHHHTCEEEEECSCCCSSCSSCCTTCSSCSEEEEETTTTCC---CEEEECSSSSEEEEEETTS
T ss_pred EEEEcCCHHHHHHHHHHHHHcCCeEEEEeCCCCcccccccCCCCCCCeEEEECcCcCC---CEEECCCCCccEEEEccCC
Confidence 47899999999887752110 124777889988742211 11 1 14688984 454 444443 589999999
Q ss_pred CHHHHHHhhhh
Q psy7003 587 TLTEAMDYFDR 597 (1520)
Q Consensus 587 Tlsel~e~L~~ 597 (1520)
++.++.+.+.+
T Consensus 109 ~l~~L~~~L~~ 119 (540)
T 3js8_A 109 TMEALLTGLEK 119 (540)
T ss_dssp BHHHHHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 99999987664
No 130
>3ah7_A [2Fe-2S]ferredoxin; [2Fe-2S] cluster, iron-sulfur cluster biosynthes pseudomonas, metal binding protein; 1.90A {Pseudomonas putida}
Probab=41.76 E-value=32 Score=33.45 Aligned_cols=36 Identities=28% Similarity=0.660 Sum_probs=27.3
Q ss_pred cCCCCcchhHHHHhhhcccCcccccc-CCCccceeeeec
Q psy7003 312 EVPPGTRLVDFIRDYARLKGTKYMCR-EGGCGVCTVTVT 349 (1520)
Q Consensus 312 ~~~~~~tll~~Lr~~~~l~gtk~~C~-~g~cGactV~v~ 349 (1520)
+++++.||++.+++ +|+. -...|. .|.||.|-|.|.
T Consensus 20 ~~~~g~tlL~aa~~-~Gi~-i~~~C~g~G~CgtC~v~v~ 56 (113)
T 3ah7_A 20 EVKPGTNILELAHD-HHIE-MESACGGVKACTTCHCIVR 56 (113)
T ss_dssp ECCTTCBHHHHHHH-TTCC-CCCTTCSSSSCSTTEEEEE
T ss_pred EECCCCcHHHHHHH-cCCC-CCcCCCCCCCcCCCEEEEc
Confidence 46789999999985 3443 345787 699999998774
No 131
>2pia_A Phthalate dioxygenase reductase; HET: FMN; 2.00A {Burkholderia cepacia} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=41.35 E-value=17 Score=41.60 Aligned_cols=50 Identities=20% Similarity=0.553 Sum_probs=34.5
Q ss_pred cceEEEECCEEEEecccCCCCcchhHHHHhhhcccCccccccCCCccceeeeec
Q psy7003 296 STVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVT 349 (1520)
Q Consensus 296 ~~~~f~~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gtk~~C~~g~cGactV~v~ 349 (1520)
..++..+.+...++ +++++.|||+.+++ +|+. -...|.+|.||.|.+-|.
T Consensus 236 ~~~~v~~~~~~~~~--~~~~~~~ll~a~~~-~g~~-~~~~C~~G~Cg~C~~~v~ 285 (321)
T 2pia_A 236 TPFTVRLSRSGTSF--EIPANRSILEVLRD-ANVR-VPSSCESGTCGSCKTALC 285 (321)
T ss_dssp CCEEEEETTTCCEE--EECTTSCHHHHHHH-TTCC-CCCSCSSSSSCTTEEEEE
T ss_pred ccEEEEEeCCCeEE--EECCCCcHHHHHHH-cCCC-CCCCCCCCCCCCCEEEEe
Confidence 34555554443333 35789999999985 4544 355799999999987764
No 132
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=38.94 E-value=46 Score=40.98 Aligned_cols=73 Identities=7% Similarity=0.004 Sum_probs=50.5
Q ss_pred EEEEcCCHHHHHHHHhc----CCCCCCcEEEEecchhhhccCCCCCCeeeeCCCcccccceEE-----eC--CeEEEccc
Q psy7003 517 IWYIVTEVREIFEIFDG----LEANQTYMLVGGNTGYGVYRPRVPVDVYIQIRDIKELRQIFT-----RN--GYVLMGSA 585 (1520)
Q Consensus 517 ~~~rPtSLeEal~ll~~----~p~~~~a~lVAGGTdLgv~~k~~~~~~lIdIs~I~EL~~I~~-----~~--~~L~IGA~ 585 (1520)
..+.|+|.+|+.++++. ++ -...+.+|||++.-..- ..-.++||++++..+ .|.. ++ ..++++|+
T Consensus 64 ~vv~P~s~eeV~~iv~~a~~~~~--~~v~~~GgGts~~g~~~-~~~gvvidl~~m~~i-~i~~~~~~~~~~~~~v~v~aG 139 (524)
T 2exr_A 64 AVVRPVGPEDIAGAVKAALRSDK--LTVAARGNGHSINGQAM-AEGGLVVDMSTTAEN-HFEVGYLSGGDATAFVDVSGG 139 (524)
T ss_dssp EEEECSSHHHHHHHHHHHHHSSS--CCEEEESSSCCSSSTTC-CTTSEEEEGGGGTTS-CEEEEECCSSSSSEEEEEETT
T ss_pred EEEecCCHHHHHHHHHHHHhhcC--ceEEEECCCcCCCCccc-CCCEEEEECcCCCCc-EEeecccCCCCCceEEEEeCC
Confidence 46899999999887752 32 24677899999762211 112578998866555 4555 33 57999999
Q ss_pred cCHHHHHH
Q psy7003 586 TTLTEAMD 593 (1520)
Q Consensus 586 vTlsel~e 593 (1520)
+++.++.+
T Consensus 140 v~~~~l~~ 147 (524)
T 2exr_A 140 ALWEDVLK 147 (524)
T ss_dssp CBHHHHHH
T ss_pred cCHHHHHH
Confidence 99998754
No 133
>3i9v_3 NADH-quinone oxidoreductase subunit 3; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_3* 2fug_3* 3iam_3* 3ias_3* 3m9s_3*
Probab=32.28 E-value=35 Score=44.13 Aligned_cols=48 Identities=27% Similarity=0.515 Sum_probs=35.6
Q ss_pred ceEEEECCEEEEecccCCCCcchhHHHHhhhcccC-----ccccccCCCccceeeeec
Q psy7003 297 TVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKG-----TKYMCREGGCGVCTVTVT 349 (1520)
Q Consensus 297 ~~~f~~ng~~~~~~~~~~~~~tll~~Lr~~~~l~g-----tk~~C~~g~cGactV~v~ 349 (1520)
|++|++||+.+++ ++|+|+++.++.. |..- .+..|..|.|+.|-|.|.
T Consensus 1 mv~i~idg~~~~v----~~g~til~a~~~~-gi~ip~~C~~~~~~~~G~C~~C~V~v~ 53 (783)
T 3i9v_3 1 MVRVKVNDRIVEV----PPGTSVMDAVFHA-GYDVPLFCSEKHLSPIGACRMCLVRIG 53 (783)
T ss_dssp CEEEECSSCEEEE----CTTCBHHHHHHHT-TCCCCCSSCCTTSCCCCCSCCSEEEEE
T ss_pred CeEEEECCEEEEe----CCCChHHHHHHHh-CCCccccCCCCCCCCCcccCCcEEEec
Confidence 5789999987655 6899999999853 3222 122247799999999994
No 134
>1tyg_B YJBS; alpha beta barrel, protein-protein complex, THis, BIOS protein; 3.15A {Bacillus subtilis} SCOP: d.15.3.2
Probab=32.10 E-value=39 Score=32.01 Aligned_cols=40 Identities=13% Similarity=0.155 Sum_probs=28.2
Q ss_pred EEEEEECCEEEEEcccCCCC-CchHHHHHhhcCCCCCcCCCCCCCCCeeEEEECCc
Q psy7003 21 TVRFTINGVVYIIGAEVPPG-TRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTSS 75 (1520)
Q Consensus 21 ~~~~~ing~~~~~~~~~~~~-~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~~~~ 75 (1520)
.++++|||+.+++ +.+ .||.++|+. +++.. ..+.|.||+.
T Consensus 20 ~M~I~vNGe~~el----~~~~~Tv~dLL~~-L~~~~----------~~vaVavNg~ 60 (87)
T 1tyg_B 20 RHMLQLNGKDVKW----KKDTGTIQDLLAS-YQLEN----------KIVIVERNKE 60 (87)
T ss_dssp --CEEETTEEECC----SSSCCBHHHHHHH-TTCTT----------SCCEEEETTE
T ss_pred ceEEEECCEEEEC----CCCCCcHHHHHHH-hCCCC----------CCEEEEECCE
Confidence 4678999998764 465 899999975 56541 2357999985
No 135
>3n9z_C Adrenodoxin; cytochrome P450, 22-hydroxycholesterol, cholesterol SIDE CHA cleavage, structural genomics; HET: HEM HC9; 2.17A {Homo sapiens} SCOP: d.15.4.1 PDB: 3na1_C* 3p1m_A* 1l6u_A 1l6v_A 1e6e_B* 1cje_A
Probab=29.81 E-value=14 Score=37.14 Aligned_cols=49 Identities=20% Similarity=0.363 Sum_probs=9.6
Q ss_pred eEEE-ECCEEEEecccCCCCcchhHHHHhhhcccCc-ccccc-CCCccceeeeec
Q psy7003 298 VRFT-INGVVYIIGAEVPPGTRLVDFIRDYARLKGT-KYMCR-EGGCGVCTVTVT 349 (1520)
Q Consensus 298 ~~f~-~ng~~~~~~~~~~~~~tll~~Lr~~~~l~gt-k~~C~-~g~cGactV~v~ 349 (1520)
++|. .+|....+ ++++|+||++.+++. ++.-. -..|+ .+.||.|-|.|.
T Consensus 8 Vtf~~~~G~~~~v--~~~~G~tLl~aa~~~-gi~i~g~~~CgG~g~CgtC~v~v~ 59 (123)
T 3n9z_C 8 VHFINRDGETLTT--KGKVGDSLLDVVVEN-NLDIDGFGACEGTLACSTCHLIFE 59 (123)
T ss_dssp --------------------------------------CTTCSSSSCSTTBC---
T ss_pred EEEEeCCCCEEEE--EECCCCcHHHHHHHc-CCCCCcCCCCCCCCEeCCCeeEEe
Confidence 4454 36765555 568899999999863 33311 13576 688888876553
No 136
>2l32_A Small archaeal modifier protein 2; protein BIN; NMR {Haloferax volcanii}
Probab=29.55 E-value=29 Score=31.73 Aligned_cols=65 Identities=14% Similarity=0.047 Sum_probs=44.9
Q ss_pred eEEEEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEECCccCCCCcccccccccchhhHHhcCC
Q psy7003 20 STVRFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTSSHPVTGVDSTYSVNACLVLVHMCGG 99 (1520)
Q Consensus 20 ~~~~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~~~~~~~~~~~~~~~v~scl~~~~~~~g 99 (1520)
|+|+++|||..... -++++++|+.|+|+. +++..- .+.|++||..-.-++ ..+|
T Consensus 1 M~v~Vkl~g~~~~~-~ev~~g~Tv~dLL~~-Lgl~~~----------~VvV~vNG~~v~~d~--------------~l~G 54 (74)
T 2l32_A 1 MNVTVEVVGEETSE-VAVDDDGTYADLVRA-VDLSPH----------EVTVLVDGRPVPEDQ--------------SVEV 54 (74)
T ss_dssp CEEEEECSSSSEEE-EECSTTCSHHHHHHT-TCCCSS----------CCCEECCCCCCCTTS--------------SSCC
T ss_pred CEEEEEEeCcccee-EEcCCCCcHHHHHHH-cCCCcc----------eEEEEECCEECCHHH--------------CCCC
Confidence 68999999985322 278899999999975 687743 236999996321111 2468
Q ss_pred cEEEEecCCCC
Q psy7003 100 WAITTVEGLGS 110 (1520)
Q Consensus 100 ~~i~T~eg~~~ 110 (1520)
..|.-+.=+|.
T Consensus 55 D~VeIv~~V~G 65 (74)
T 2l32_A 55 DRVKVLRLIKG 65 (74)
T ss_dssp CCEEECSSCSC
T ss_pred CEEEEEEeecc
Confidence 88887776663
No 137
>2kl0_A Putative thiamin biosynthesis THis; structural genomics, PSI-2, protein structure initiative, N structural genomics consortium, NESG; NMR {Rhodopseudomonas palustris} PDB: 2lek_A
Probab=29.13 E-value=44 Score=30.43 Aligned_cols=62 Identities=18% Similarity=0.127 Sum_probs=40.5
Q ss_pred EEEECCEEEEEcccCCCCCchHHHHHhhcCCCCCcCCCCCCCCCeeEEEECCccCCCCcccccccccchhhH-HhcCCcE
Q psy7003 23 RFTINGVVYIIGAEVPPGTRLVDFIRDYARLKGTKYMCREGGCGVCTVTVTSSHPVTGVDSTYSVNACLVLV-HMCGGWA 101 (1520)
Q Consensus 23 ~~~ing~~~~~~~~~~~~~~l~~~lr~~~~l~g~k~~c~~g~cGactv~~~~~~~~~~~~~~~~v~scl~~~-~~~~g~~ 101 (1520)
+++|||+.++ + .++||.++|.. +++.. -.|.|.+|+. -|..-...- .--+|..
T Consensus 2 ~I~vNG~~~e----~-~~~Tl~~LL~~-l~~~~----------~~vAV~vNg~----------iVpr~~~~~~~L~dGD~ 55 (73)
T 2kl0_A 2 LVTINGEQRE----V-QSASVAALMTE-LDCTG----------GHFAVALNYD----------VVPRGKWDETPVTAGDE 55 (73)
T ss_dssp CEEETTEEEC----C-CCSBHHHHHHH-TTCCS----------SSCEEEESSS----------EECHHHHTTCBCCTTCE
T ss_pred EEEECCEEEE----c-CCCcHHHHHHH-cCCCC----------CcEEEEECCE----------ECChHHcCcccCCCCCE
Confidence 4799999765 4 67999999975 67762 2357999995 222221111 1237888
Q ss_pred EEEecCCCC
Q psy7003 102 ITTVEGLGS 110 (1520)
Q Consensus 102 i~T~eg~~~ 110 (1520)
|.-+--+|.
T Consensus 56 veIv~~VgG 64 (73)
T 2kl0_A 56 IEILTPRQG 64 (73)
T ss_dssp EEEECCCCC
T ss_pred EEEEccccC
Confidence 888887764
No 138
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=28.77 E-value=61 Score=39.54 Aligned_cols=76 Identities=12% Similarity=0.105 Sum_probs=49.3
Q ss_pred EEEEcCCHHHHHHHHh---cCCCCCCcEEEEecchhhhc-cCCCC--CCeeeeCCCcccccceEE--eCCeEEEccccCH
Q psy7003 517 IWYIVTEVREIFEIFD---GLEANQTYMLVGGNTGYGVY-RPRVP--VDVYIQIRDIKELRQIFT--RNGYVLMGSATTL 588 (1520)
Q Consensus 517 ~~~rPtSLeEal~ll~---~~p~~~~a~lVAGGTdLgv~-~k~~~--~~~lIdIs~I~EL~~I~~--~~~~L~IGA~vTl 588 (1520)
-.++|+|.+|..++++ ++. -...+-+||++..-. ..... ...+||++++ +.|+. +...++||+++++
T Consensus 55 ~vv~p~~~~~v~~~v~~a~~~~--~~~~~r~gGh~~~g~s~~~~~~~~~~~idl~~~---~~v~~d~~~~~~~v~~G~~~ 129 (500)
T 3tsh_A 55 YIITPTQVSHIQSAVVCGRRHS--VRIRVRSGGHDYEGLSYRSLQPETFAVVDLNKM---RAVWVDGKARTAWVDSGAQL 129 (500)
T ss_dssp EEECCSSHHHHHHHHHHHHHTT--CEEEEESSCCCTTCTTTCCSSSCCEEEEECTTC---CCEEEETTTTEEEEETTSBH
T ss_pred EEEEcCCHHHHHHHHHHHHHCC--CcEEEEcCCcCCCCCcCCCCCcCCeEEEECcCC---CCEEECCCCCEEEEccCcCH
Confidence 3578999998877654 443 134555788764321 11111 1478998875 45554 4568999999999
Q ss_pred HHHHHhhhh
Q psy7003 589 TEAMDYFDR 597 (1520)
Q Consensus 589 sel~e~L~~ 597 (1520)
.++.+.+..
T Consensus 130 ~~~~~~l~~ 138 (500)
T 3tsh_A 130 GELYYAIYK 138 (500)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999885543
No 139
>2al3_A TUG long isoform; TUG UBL1 insulin, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: d.15.1.2
Probab=21.79 E-value=42 Score=32.12 Aligned_cols=45 Identities=20% Similarity=0.249 Sum_probs=29.0
Q ss_pred CCCCCCceEEEEEECCEEEEEcccCCCCCchHHHHHh---hcCCCCCcCC
Q psy7003 13 RLFSDTSSTVRFTINGVVYIIGAEVPPGTRLVDFIRD---YARLKGTKYM 59 (1520)
Q Consensus 13 ~~~~~~~~~~~~~ing~~~~~~~~~~~~~~l~~~lr~---~~~l~g~k~~ 59 (1520)
+.....+.-+.+.-||+++.+ .|.|+++|.++|-+ ++|+..-++.
T Consensus 4 ~~~~~~m~v~Vl~~n~rr~~V--Kvtp~t~L~~VL~eaC~K~gl~~~~~~ 51 (90)
T 2al3_A 4 PAGGGGSAVSVLAPNGRRHTV--KVTPSTVLLQVLEDTCRRQDFNPSEYD 51 (90)
T ss_dssp ------CCEEEECTTSCEEEE--CCCTTSBHHHHHHHHHHHTTCCGGGCE
T ss_pred cccCCccEEEEEcCCCcEEEE--EECCCCCHHHHHHHHHHHhCCChhhCe
Confidence 333444444555669999999 69999999999964 5677654443
No 140
>2kwp_A Transcription elongation protein NUSA; NMR {Escherichia coli}
Probab=20.21 E-value=77 Score=32.04 Aligned_cols=28 Identities=21% Similarity=0.386 Sum_probs=23.2
Q ss_pred EEEEEECCCCcEEEEEEEEEEecCcccChH
Q psy7003 1452 TEVEVDLLTGQHQILRVDILEDTGQSINPA 1481 (1520)
Q Consensus 1452 aEVEVD~~TG~v~V~r~~~~~D~G~~INP~ 1481 (1520)
++|++|+.||+++|-+.+.++|= +-||.
T Consensus 45 ~~V~id~~tG~~~v~~~~~VVee--ved~~ 72 (129)
T 2kwp_A 45 VRVQIDRKSGDFDTFRRWLVVDE--VTQPT 72 (129)
T ss_dssp EEEEEETTTTEEEEEEEEEEETT--CSCTT
T ss_pred eEEEEECCCCeEEEEEEEEEecC--CCCCc
Confidence 59999999999999999888863 55554
Done!