RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy7005
         (88 letters)



>d1b78a_ c.51.4.1 (A:) XTP pyrophosphatase {Archaeon Methanococcus
           jannaschii [TaxId: 2190]}
          Length = 184

 Score = 25.3 bits (54), Expect = 1.0
 Identities = 11/42 (26%), Positives = 17/42 (40%)

Query: 41  HGVFFLYGSCSVFGLIYLYIWLPETEGKTLHEIELHFKQKKS 82
            G          +G  Y  I++PE E +T  E+    K + S
Sbjct: 126 KGRVSEEIRSKGYGFAYDSIFIPEEEERTFAEMTTEEKSQIS 167


>d2iw0a1 c.6.2.3 (A:29-248) Chitin deacetylase {Bean anthracnose
          fungus (Colletotrichum lindemuthianum) [TaxId: 290576]}
          Length = 220

 Score = 23.3 bits (49), Expect = 5.6
 Identities = 7/46 (15%), Positives = 13/46 (28%)

Query: 32 LDLHMRIGLHGVFFLYGSCSVFGLIYLYIWLPETEGKTLHEIELHF 77
          LD+  +  +   FF+ G+                     H +  H 
Sbjct: 32 LDILKQNDVRATFFVNGNNWANIEAGSNPDTIRRMRADGHLVGSHT 77


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.327    0.142    0.432 

Gapped
Lambda     K      H
   0.267   0.0458    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 313,989
Number of extensions: 11926
Number of successful extensions: 29
Number of sequences better than 10.0: 1
Number of HSP's gapped: 29
Number of HSP's successfully gapped: 7
Length of query: 88
Length of database: 2,407,596
Length adjustment: 53
Effective length of query: 35
Effective length of database: 1,679,906
Effective search space: 58796710
Effective search space used: 58796710
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 47 (22.6 bits)