BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7014
(500 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A0A1F4|EYS_DROME Protein eyes shut OS=Drosophila melanogaster GN=eys PE=1 SV=1
Length = 2176
Score = 278 bits (711), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 156/357 (43%), Positives = 205/357 (57%), Gaps = 51/357 (14%)
Query: 179 DFLCMSIYTSYLQPTGHMFVDTYRGPRRIFTPNTISAK--SKRGGYTVRVGKNGQQCWLM 236
D L +S Y+ T ++ GPRRIFT I + + R Y ++VG+ G+Q WL
Sbjct: 1410 DHLAVSFIQGYIMLTWNLGA----GPRRIFTQKPIDFRLDAPRVPYEIKVGRIGRQAWLS 1465
Query: 237 VDNMGNVTSKSPGRLTQLNTKPMLYLGGHFSKNFSILPHDLPLHSGFSGCIFDVELSAGN 296
VD N+T +SPG ++++ P+LYLGGH NF+ LPHDLPLHSGF GCI+DV+L AG
Sbjct: 1466 VDGKFNITGRSPGSGSRMDVLPILYLGGHEIANFNTLPHDLPLHSGFQGCIYDVQLKAGQ 1525
Query: 297 VGINLYKTRAAEGRGVGQCGTSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYN 356
V + L +TR GRGVGQCGT +CH H C H GAC+ HGATF+C+C +GW+GPLCA N
Sbjct: 1526 VTVPLQETRGVRGRGVGQCGTRECHRHACQHDGACLQHGATFTCICQEGWYGPLCAQPTN 1585
Query: 357 LCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCEKD-ESLSDISFSGRRSY------- 408
CDS + C ATCVPL + YECDCP GRTGK CE+ SLSD+S +GRRSY
Sbjct: 1586 PCDSFNNKCYEDATCVPLVNGYECDCPVGRTGKNCEEVIRSLSDVSLTGRRSYLAVRWPY 1645
Query: 409 ------------------------------ISLPSSELHL-IINESLSDISFSGRRSYIS 437
I+ PSS + ++NE SFS S
Sbjct: 1646 LYDGGDKLGAKRSQMVSYRNFTKKLMPPKPITTPSSHFVMKLLNEVEKQRSFSPVPLMGS 1705
Query: 438 LPSSELH-LHEACIDLEIRPTKDKGLLMYFG-----HPQKNSMMTLSLQGGVLELRV 488
E H + I+ ++RP ++GLL+YFG +K ++LSLQGGV+E R+
Sbjct: 1706 KSFEEHHRVQFFFIEFQLRPLSERGLLLYFGTLNNNQDKKIGFVSLSLQGGVVEFRI 1762
Score = 102 bits (254), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 74/120 (61%)
Query: 60 DIEIGQASYSSSMSGLSSFSAYVIPANIHHCFELKFRFVPNSFDQIALLAFIGQDYQHDA 119
++E+ S+S S++GLSSF AY +P + + EL F+ +P + QI+LLAF GQ HD
Sbjct: 1348 NLEVALPSFSGSVNGLSSFVAYTVPIPLEYSLELSFKILPQTMSQISLLAFFGQSGYHDE 1407
Query: 120 ITDHLAVSFIKGYVVLTWNLGSGWYLVYFEHTYLFILSRLRSAQDTRLCCLPLHLILGVD 179
+DHLAVSFI+GY++LTWNLG+G ++ + F L R + ++ + L VD
Sbjct: 1408 KSDHLAVSFIQGYIMLTWNLGAGPRRIFTQKPIDFRLDAPRVPYEIKVGRIGRQAWLSVD 1467
Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 23/171 (13%)
Query: 254 LNTKPMLYLGGHFSKNFSILPHDLPLHSG--FSGCIFDVELSAGNVGINLYKTRAAEGRG 311
LNT L+LGG ++ P SG F+GC+ + ++ I A +G G
Sbjct: 1203 LNT--WLHLGGAPQAPIGLIIELPPAQSGSGFTGCLHTLRINGQAREIF---GDALDGFG 1257
Query: 312 VGQCGTSQCHNHTCSHGGACMN-----------HGATFSCLCADGWFGPLCASRYNLCDS 360
+ +CG+ C + C +G AC+ + C C G+ GP C ++C+
Sbjct: 1258 ITECGSLACLSSPCRNGAACIKIETNDLDENGEKAEKWKCKCPTGYMGPTC--EISVCED 1315
Query: 361 TRHNCSFGATCVPLTHS-YECDCPPGRTGKFCEKDESLSDISFSGRRSYIS 410
+ C +G TCV S Y C CP G+ G +CE + ++ SFSG + +S
Sbjct: 1316 --NPCQYGGTCVQFPGSGYLCLCPLGKHGHYCEHNLEVALPSFSGSVNGLS 1364
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 325 CSHGGACMN-HGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDCP 383
C HGG C+ G F+C C GW G +C N C S+ C G CV +Y C CP
Sbjct: 270 CQHGGECIEGPGLEFTCDCPAGWHGRICQEEINECASS--PCQNGGVCVDKLAAYACACP 327
Query: 384 PGRTGKFCEKD 394
G TG CE++
Sbjct: 328 MGYTGINCEEE 338
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 7/122 (5%)
Query: 286 CIFDVELSAGNVGINLYKTRAAEGRGVGQCGTS--QCHNHTCSHGGACMNHGATFSCLCA 343
C+F V + N + Y G QC T+ +C + C +GG C++ A ++C C
Sbjct: 153 CVFGVCIDGLNSSYSCYCIDGYTGI---QCQTNWDECWSSPCQNGGTCVDGVAYYNCTCP 209
Query: 344 DGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCEKDESLSDISFS 403
+G+ G C + C S + C G C T+ Y C C PG G CE D ++ +
Sbjct: 210 EGFSGSNCEENVDECMS--NPCQNGGLCRDRTNGYICTCQPGYLGSHCELDVAVCETGTG 267
Query: 404 GR 405
R
Sbjct: 268 AR 269
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 103/249 (41%), Gaps = 51/249 (20%)
Query: 259 MLYLGGHFSKNFSILPHD----LPLHSGFSGCIFDVELSAGNVGINLYKTRAAEGRGVGQ 314
+LY+GG K+ S LPH+ P+ F GC+ + +S + +N +T E R +
Sbjct: 1820 LLYIGGL--KDVSKLPHNAISGFPIP--FRGCVRGLVVSGTRIVLN--ETNIVESRNIRD 1873
Query: 315 CGTSQCHNHTCSHGGAC-MNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATC-- 371
C + C +C GG C ++ C+C + G C + TC
Sbjct: 1874 CDGTACGGDSCESGGHCWLDEKLQPHCICPEYAKG--------------DRCEYSETCKL 1919
Query: 372 VPLTH------SYECDCPPGRTGKFCEKDESL-SDISFSGRRSYISLPSSELHLIINESL 424
+P + S C CP G G +CE S + SF G SY+ LP + +
Sbjct: 1920 IPCKNNGRCLRSGRCSCPNGWGGFYCEIAMSKPTTPSFRG-NSYLILPPPRIPMK----- 1973
Query: 425 SDISFSGRRSYISLPSSELHLHEAC-IDLEIRPTKDKGLLMYFGHPQKNSMMTLSLQGGV 483
RR PS + EA + L + GLL++ H +++ + L L+ G
Sbjct: 1974 -----DKRRG----PSLYVRPREAIQVSLNFSTIEPDGLLLWSEH-ERSKFLGLGLEAGH 2023
Query: 484 LELRVLMLG 492
L+L +LG
Sbjct: 2024 LKLASNLLG 2032
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 316 GTSQ----CHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATC 371
G+SQ C ++ C G +++SC C DG+ G C + ++ C S+ C G TC
Sbjct: 140 GSSQAGFACLSNPCVFGVCIDGLNSSYSCYCIDGYTGIQCQTNWDECWSS--PCQNGGTC 197
Query: 372 VPLTHSYECDCPPGRTGKFCEK--DESLSD 399
V Y C CP G +G CE+ DE +S+
Sbjct: 198 VDGVAYYNCTCPEGFSGSNCEENVDECMSN 227
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Query: 320 CHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYE 379
C ++ C + C+ +C C + G C +Y+ C C G C+ ++
Sbjct: 342 CADNPCQNNALCLMEEGVPTCYCVPDYHGEKCEFQYDECQ-LGPRCMNGGVCIDGVDTFS 400
Query: 380 CDCPPGRTGKFCE 392
C CPP TG CE
Sbjct: 401 CSCPPLLTGMLCE 413
Score = 38.1 bits (87), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 318 SQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHS 377
++C + C +GG C++ A ++C C G+ G C +C + C A C+
Sbjct: 302 NECASSPCQNGGVCVDKLAAYACACPMGYTGINCEEEILIC--ADNPCQNNALCLMEEGV 359
Query: 378 YECDCPPGRTGKFCE 392
C C P G+ CE
Sbjct: 360 PTCYCVPDYHGEKCE 374
>sp|Q5T1H1|EYS_HUMAN Protein eyes shut homolog OS=Homo sapiens GN=EYS PE=1 SV=5
Length = 3165
Score = 152 bits (384), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 137/450 (30%), Positives = 192/450 (42%), Gaps = 89/450 (19%)
Query: 61 IEIGQASYSSSMS-GLSSFSAYVIPANI--HHCFELKFRFVPN-SFDQIALLAFIGQDYQ 116
I I Q +S + + G +SF AY ++I H+ F LKF+ N S Q L+ F GQ
Sbjct: 2411 INITQPRFSGTDAFGYTSFLAYSRISDISFHYEFHLKFQLANNHSALQNNLIFFTGQKGH 2470
Query: 117 HDAITDHLAVSFIKGYVVLTWNLGSGWYLVYFEHTYLFILSRLRSAQDTRLCCLPLHLIL 176
D LAV + G VV ++NLGSG ++ +RS PL+L L
Sbjct: 2471 GLNGDDFLAVGLLNGSVVYSYNLGSG-------------IASIRSE--------PLNLSL 2509
Query: 177 GVDFLCMSIYTSYLQPTGHMFVDTYRGPRRIFTPNTISAKSKRGGYTVRVGKNGQQCWLM 236
GV +TV +GK Q+ WL
Sbjct: 2510 GV-------------------------------------------HTVHLGKFFQEGWLK 2526
Query: 237 VDNMGNVTSKSPGRLTQLNTKPMLYLGGHFSKNFSILPHDLPLHSGFSGCIFDVELSAGN 296
VD+ N + +PGRL LN Y+GG+ +LP+ +GF GCIF +++
Sbjct: 2527 VDDHKNKSIIAPGRLVGLNVFSQFYVGGYSEYTPDLLPNGADFKNGFQGCIFTLQVRTEK 2586
Query: 297 ----VGINLYKTRAAEGRGVGQCGTSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCA 352
G+ + GR VGQC S C C +GG C+ G + C C GW G C
Sbjct: 2587 DGHFRGLGNPEGHPNAGRSVGQCHASPCSLMKCGNGGTCIESGTSVYCNCTTGWKGSFCT 2646
Query: 353 SRYNLCDSTR---HNCSFGATCVPLTHSYECDCPPGRTGKFCEKDESLSDISFSGRRSYI 409
+ CD H+CS GATC+ L H Y C CP G TG +CE+ L I + +
Sbjct: 2647 ETVSTCDPEHDPPHHCSRGATCISLPHGYTCFCPLGTTGIYCEQALILIVILEKPKPAER 2706
Query: 410 SLPSSELHLIINESLSDISF-SGRRSYISLPSSELHLHEAC-IDLEIRPTKDKGLLMYFG 467
+ L S+SD SF S S++S S H+ + I L+ +P G+L Y
Sbjct: 2707 KVKKEAL------SISDPSFRSNELSWMSFAS--FHVRKKTHIQLQFQPLAADGILFYAA 2758
Query: 468 H---PQKNSMMTLSLQGGVLELRVLMLGDR 494
Q + +SL ++LR LGDR
Sbjct: 2759 QHLKAQSGDFLCISLVNSSVQLR-YNLGDR 2787
Score = 98.6 bits (244), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 147/323 (45%), Gaps = 48/323 (14%)
Query: 179 DFLCMSIYTSYLQPTGHMFVDTYRGPRRIFTPNTISAKSKRGG--YTVRVGKNGQQCWLM 236
DFLC+S+ S +Q ++ G R I T+ + G + ++ G+ G + +L
Sbjct: 2767 DFLCISLVNSSVQLRYNL------GDRTIIL-ETLQKVTINGSTWHIIKAGRVGAEGYLD 2819
Query: 237 VDNMGNVTSKSPGRLTQLNTKPMLYLGGHFSKNF--SILPHDLPLHSGFSGCIFDVELSA 294
+D + NVT K+ +++ L+T Y+GG S N + + P+ GF GCI V ++
Sbjct: 2820 LDGI-NVTEKASTKMSSLDTNTDFYIGGVSSLNLVNPMAIENEPV--GFQGCIRQVIIN- 2875
Query: 295 GNVGINLYKTRAAEGRGVGQCGTSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASR 354
N + L + A G VG C + C +TC +GG C +G TFSC C W G C
Sbjct: 2876 -NQELQLTEFGAKGGSNVGDCDGTACGYNTCRNGGECTVNGTTFSCRCLPDWAGNTCNQS 2934
Query: 355 YNLCDSTRHNCSFGATCVP-LTHSYECDCPPGRTGKFCEKDESLSDISFSGRRSYISLPS 413
+ ++ C + C+P + SY C C G G++CE S S F G SYI
Sbjct: 2935 VSCLNNL---CLHQSLCIPDQSFSYSCLCTLGWVGRYCENKTSFSTAKFMG-NSYIK--- 2987
Query: 414 SELHLIINESLSDISFSGRRSYISLPSSELHLHEACIDLEIRPTKDKGLLMYFGHPQ--K 471
++ N + ++ F+ I L TK +GL+++ G Q +
Sbjct: 2988 ---YIDPNYRMRNLQFTT------------------ISLNFSTTKTEGLIVWMGIAQNEE 3026
Query: 472 NSMMTLSLQGGVLELRVLMLGDR 494
N + + L L++ V LG+R
Sbjct: 3027 NDFLAIGLHNQTLKIAV-NLGER 3048
Score = 68.9 bits (167), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 97/227 (42%), Gaps = 27/227 (11%)
Query: 208 FTPNTISAKSKRGGYTVRVGKNGQQCWLMVDNMGNVTSKSPGRLTQLNTKPMLYLG---- 263
FTP TI YT VG G C M++ + + T+++ Y
Sbjct: 2236 FTPITIR-------YTTPVGSPGVVC--MIEMTADGKPPVQKKDTEISHASQAYFESMFL 2286
Query: 264 GHFSKNFSILPHDLPLHSGFSGCIFDVELSAGNVGINLYKTRAAEGRGVGQCGTSQCHNH 323
GH N I P++ GF GCI D++++ I A G+ + C C +H
Sbjct: 2287 GHIPANVQIHKKAGPVY-GFRGCILDLQVNNKEFFI---IDEARHGKNIENCHVPWCAHH 2342
Query: 324 TCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHS-YECDC 382
C + G C++ C C + G LC ++ C++ + C GATCVP + + C C
Sbjct: 2343 LCRNNGTCISDNENLFCECPRLYSGKLC--QFASCEN--NPCGNGATCVPKSGTDIVCLC 2398
Query: 383 PPGRTGKFCEKDESLSDISFSGRRSYISLPSSELHLIINESLSDISF 429
P GR+G C +++ FSG ++ + +SDISF
Sbjct: 2399 PYGRSGPLCTDAINITQPRFSGTDAF-----GYTSFLAYSRISDISF 2440
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Query: 324 TCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDCP 383
+C G C + F C+C G+ G LC N C S C TCV LT+ + C+C
Sbjct: 898 SCQDYGDCEDMVNNFRCICRPGFSGSLCEIEINECSS--EPCKNNGTCVDLTNRFFCNCE 955
Query: 384 PGRTGKFCEKDESLSDIS 401
P G FCE D + IS
Sbjct: 956 PEYHGPFCELDVNKCKIS 973
Score = 48.9 bits (115), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 12/127 (9%)
Query: 317 TSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATC--VPL 374
+++C + C + C + ++ C C GW G C+ N CDS C G C +
Sbjct: 772 SNECKMNPCKNNSTCTDLYKSYRCECTSGWTGQNCSEEINECDSDP--CMNGGLCHESTI 829
Query: 375 THSYECDCPPGRTGKFCEKDESLSDISFSGRR---SYISLPSSELHLIINESLSDISFSG 431
+ C CPP TG+FC + +L D+ + R + ++L + H I E F G
Sbjct: 830 PGQFVCLCPPLYTGQFCHQRYNLCDLLHNPCRNNSTCLALVDANQHCICRE-----EFEG 884
Query: 432 RRSYISL 438
+ I +
Sbjct: 885 KNCEIDV 891
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Query: 310 RGVGQCGTSQCHNHTCSHGGACMNH-GATFSCLCADGWFGPLCASRYNLCDSTRHNCSFG 368
+ + C + ++ C +GG C++ G TF C C G+ G C N C S+ C G
Sbjct: 1116 KSIDNCAEPELNSVICLNGGICVDGPGHTFDCRCLPGFSGQFCEININECSSSP--CLHG 1173
Query: 369 ATCVPLTHSYECDCPPGRTGKFCEKD 394
A C + Y C C PG +G CE +
Sbjct: 1174 ADCEDHINGYVCKCQPGWSGHHCENE 1199
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Query: 320 CHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYE 379
C + C H C + ++ C+C W G C N C + C +TC L SY
Sbjct: 737 CILNACEHNSTCKDLHLSYQCVCLSDWEGNFCEQESNECK--MNPCKNNSTCTDLYKSYR 794
Query: 380 CDCPPGRTGKFC--EKDESLSDISFSG 404
C+C G TG+ C E +E SD +G
Sbjct: 795 CECTSGWTGQNCSEEINECDSDPCMNG 821
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
Query: 318 SQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHS 377
++C + C + G C++ F C C + GP C N C + C CV T
Sbjct: 930 NECSSEPCKNNGTCVDLTNRFFCNCEPEYHGPFCELDVNKCKISP--CLDEENCVYRTDG 987
Query: 378 YECDCPPGRTGKFCEK--DESLSD 399
Y C C PG TG CE DE LS+
Sbjct: 988 YNCLCAPGYTGINCEINLDECLSE 1011
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 42/100 (42%), Gaps = 6/100 (6%)
Query: 299 INLYKTRAAEGRGVGQCGT--SQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYN 356
IN Y QC + C + C + G C F+C+C G+ G C +
Sbjct: 1060 INEYPCSCDADGTSTQCKIKINDCTSIPCMNEGFCQKSAHGFTCICPRGYTGAYCEKSID 1119
Query: 357 LCDSTRHN---CSFGATCVP-LTHSYECDCPPGRTGKFCE 392
C N C G CV H+++C C PG +G+FCE
Sbjct: 1120 NCAEPELNSVICLNGGICVDGPGHTFDCRCLPGFSGQFCE 1159
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 16/90 (17%)
Query: 319 QCHNHTCSHGGACMNHGAT--------------FSCLCADGWFGPLCASRYNLCDSTRHN 364
+C +H C +G C++ FSCLC G+ G C + D +
Sbjct: 684 ECASHPCKNGATCIDQPGNYFCQCVPPFKVVDGFSCLCNPGYVGIRCEQDID--DCILNA 741
Query: 365 CSFGATCVPLTHSYECDCPPGRTGKFCEKD 394
C +TC L SY+C C G FCE++
Sbjct: 742 CEHNSTCKDLHLSYQCVCLSDWEGNFCEQE 771
Score = 40.0 bits (92), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 377 SYECDCPPGRTGKFCEKDESLSDISFSGRRSYISLP 412
S++CDCP TG+FCEKD L SF+G SY+ LP
Sbjct: 2125 SFQCDCPLHFTGRFCEKDAGLFFPSFNG-NSYLELP 2159
Score = 38.5 bits (88), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 37/110 (33%), Gaps = 35/110 (31%)
Query: 319 QCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLC-------------------- 358
+C + C H G C++ ++C C G+FG C + N C
Sbjct: 1007 ECLSEPCLHDGVCIDGINHYTCDCKSGFFGTHCETNANDCLSNPCLHGRCTELINEYPCS 1066
Query: 359 ---------------DSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCEK 393
D T C C H + C CP G TG +CEK
Sbjct: 1067 CDADGTSTQCKIKINDCTSIPCMNEGFCQKSAHGFTCICPRGYTGAYCEK 1116
Score = 36.2 bits (82), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 4/91 (4%)
Query: 317 TSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTH 376
++C C C+ ++CLCA G+ G C NL + C C+ +
Sbjct: 967 VNKCKISPCLDEENCVYRTDGYNCLCAPGYTGINC--EINLDECLSEPCLHDGVCIDGIN 1024
Query: 377 SYECDCPPGRTGKFCE--KDESLSDISFSGR 405
Y CDC G G CE ++ LS+ GR
Sbjct: 1025 HYTCDCKSGFFGTHCETNANDCLSNPCLHGR 1055
Score = 34.3 bits (77), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
Query: 325 CSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDS--TRHNCSFGATCVPLTHSYECDC 382
C +G C+ C+C+ + LC S C+S R+N ATC Y C C
Sbjct: 341 CQNGTDCIKISNDVMCICSPIFTDLLCKSIQTSCESFPLRNN----ATCKKCEKDYPCSC 396
Query: 383 PPGRTGKFCEK 393
G T K CEK
Sbjct: 397 ISGFTEKNCEK 407
>sp|Q5R6R1|EYS_PONAB Protein eyes shut homolog (Fragment) OS=Pongo abelii GN=EYS PE=2
SV=2
Length = 472
Score = 138 bits (348), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 109/344 (31%), Positives = 149/344 (43%), Gaps = 75/344 (21%)
Query: 61 IEIGQASYSSSMS-GLSSFSAYVIPANI--HHCFELKFRFVPN-SFDQIALLAFIGQDYQ 116
I I Q +S + + G +SF AY ++I H+ F LKF+ N S Q L+ F GQ
Sbjct: 182 INITQPRFSGTDAFGYTSFLAYSRISDISFHYEFHLKFQLANNHSALQNNLIFFTGQKGH 241
Query: 117 HDAITDHLAVSFIKGYVVLTWNLGSGWYLVYFEHTYLFILSRLRSAQDTRLCCLPLHLIL 176
D LAV + G VV ++NLGSG ++ +RS PL+L L
Sbjct: 242 GLNGDDFLAVGLLNGSVVYSYNLGSG-------------IASIRSE--------PLNLSL 280
Query: 177 GVDFLCMSIYTSYLQPTGHMFVDTYRGPRRIFTPNTISAKSKRGGYTVRVGKNGQQCWLM 236
GV +TV +GK Q+ WL
Sbjct: 281 GV-------------------------------------------HTVHLGKFFQEGWLK 297
Query: 237 VDNMGNVTSKSPGRLTQLNTKPMLYLGGHFSKNFSILPHDLPLHSGFSGCIFDVELSAGN 296
VD+ N + +PGRL LN Y+GG+ +LP+ +GF GCIF +++
Sbjct: 298 VDDHKNKSIIAPGRLAGLNVFSQFYVGGYSEYTPDLLPNGADFKNGFQGCIFTLQVRTEK 357
Query: 297 ----VGINLYKTRAAEGRGVGQCGTSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCA 352
G+ + GR VGQC S C C +GG C+ G + C C GW G C
Sbjct: 358 DGHFRGLGNPEGHPNAGRSVGQCHASPCSLMKCGNGGTCIESGTSVYCNCTTGWKGAFCT 417
Query: 353 SRYNLCDSTR---HNCSFGATCVPLTHSYECDCPPGRTGKFCEK 393
+ CD H+CS GATC+ L H Y C CP G TG +CE+
Sbjct: 418 ETVSTCDPEHDPPHHCSRGATCISLPHGYTCFCPLGTTGIYCEQ 461
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 96/227 (42%), Gaps = 27/227 (11%)
Query: 208 FTPNTISAKSKRGGYTVRVGKNGQQCWLMVDNMGNVTSKSPGRLTQLNTKPMLYLG---- 263
FTP TI YT VG G C M++ + + T+++ Y
Sbjct: 7 FTPITIR-------YTTPVGSPGVVC--MIEMTADGKPPVQKKDTEISQASQAYFESMFL 57
Query: 264 GHFSKNFSILPHDLPLHSGFSGCIFDVELSAGNVGINLYKTRAAEGRGVGQCGTSQCHNH 323
GH N I P++ GF GCI D++++ I A G+ + C C +H
Sbjct: 58 GHIPANVQIHKKSGPVY-GFRGCILDLQVNNKEFFI---IDEAQHGKNIENCHVPWCAHH 113
Query: 324 TCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHS-YECDC 382
C + G C++ C C + G LC ++ C++ C GATCVP + + C C
Sbjct: 114 LCRNNGTCISDNENLFCECPRLYSGKLC--QFASCENNP--CGNGATCVPKSGTDIVCLC 169
Query: 383 PPGRTGKFCEKDESLSDISFSGRRSYISLPSSELHLIINESLSDISF 429
P GR+G C +++ FSG ++ + +SDISF
Sbjct: 170 PYGRSGPLCTDAINITQPRFSGTDAF-----GYTSFLAYSRISDISF 211
>sp|P98160|PGBM_HUMAN Basement membrane-specific heparan sulfate proteoglycan core protein
OS=Homo sapiens GN=HSPG2 PE=1 SV=4
Length = 4391
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 112/438 (25%), Positives = 167/438 (38%), Gaps = 99/438 (22%)
Query: 62 EIGQASYSSSMSGLSSFSAYVIPANIHHCFELKFRFVPNSFDQIALLAFIGQDYQHDAIT 121
E G + S+SG S+ A N HH L F P + D + L + + +
Sbjct: 3922 EEGVTVTTPSLSGAGSYLALPALTNTHHELRLDVEFKPLAPDGVLLFS----GGKSGPVE 3977
Query: 122 DHLAVSFIKGYVVLTWNLGSGWYLVYFEHTYLFILSRLRSAQDTRLCCLPLHLILGVDFL 181
D ++++ + G++ + LGSG L+ LRSA+
Sbjct: 3978 DFVSLAMVGGHLEFRYELGSG-------------LAVLRSAE------------------ 4006
Query: 182 CMSIYTSYLQPTGHMFVDTYRGPRRIFTPNTISAKSKRGGYTVRVGKNGQQCWLMVDNMG 241
P + + +SA+ R+ K+G L V+
Sbjct: 4007 ----------------------PLALGRWHRVSAE--------RLNKDGS---LRVNGGR 4033
Query: 242 NVTSKSPGRLTQLNTKPMLYLGGHFSKNFSILPHDLPLHSGFSGCIFDVELSAGNVGINL 301
V SPG+ LN +LYLGG + + P + + F GC+ +V ++ G L
Sbjct: 4034 PVLRSSPGKSQGLNLHTLLYLGG-VEPSVPLSPATN-MSAHFRGCVGEVSVN----GKRL 4087
Query: 302 YKTRAAEG-RGVGQC-GTSQCHNHTCSHGGACMNHGA-TFSCLCADGWFGPLCASRYNLC 358
T + G +G+GQC +S C C HG CM G F CLC DG+ G LC N C
Sbjct: 4088 DLTYSFLGSQGIGQCYDSSPCERQPCQHGATCMPAGEYEFQCLCRDGFKGDLCEHEENPC 4147
Query: 359 DSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCEKDE----SLSDISFSGRRSYISLPSS 414
R C G TC C C PG +G C++ + SD G P
Sbjct: 4148 Q-LREPCLHGGTC----QGTRCLCLPGFSGPRCQQGSGHGIAESDWHLEGSGGN-DAPGQ 4201
Query: 415 ELHLIINESLSDISFSGRRSYISLPSSELHLHEACIDLEIRPTKDKGLLMYFG-----HP 469
++ ++F G SLP I+LE+R + GLL++ G
Sbjct: 4202 YGAYFHDDGF--LAFPGHVFSRSLPEV-----PETIELEVRTSTASGLLLWQGVEVGEAG 4254
Query: 470 QKNSMMTLSLQGGVLELR 487
Q ++L LQ G L R
Sbjct: 4255 QGKDFISLGLQDGHLVFR 4272
Score = 79.3 bits (194), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 120/273 (43%), Gaps = 45/273 (16%)
Query: 222 YTVRVGKNGQQCWLMVDNMGNVTSKSPGRLTQLNTKPMLYLGGHFSKNFSILPHDLPLHS 281
+TV + ++ Q L+V ++ V S G+ L+ LYLGG+ ++ +P L S
Sbjct: 3758 HTVTLLRSLTQGSLIVGDLAPVNGTSQGKFQGLDLNEELYLGGY--PDYGAIP-KAGLSS 3814
Query: 282 GFSGCIFDVELSAGNVGINLYKTRAAEGRGVGQCGTSQCHNHTCSHGGACMN-HGATFSC 340
GF GC+ ++ + + ++ G+ C T C + C +GG C + +++ C
Sbjct: 3815 GFIGCVRELRIQGEEI---VFHDLNLTAHGISHCPT--CRDRPCQNGGQCHDSESSSYVC 3869
Query: 341 LCADGWFGPLCASRYNL-CDSTRHNCSFGATCV--PLTHSYECDCPPGRTGKFCEKDESL 397
+C G+ G C L C C ATCV P Y C C GR+G CE+ ++
Sbjct: 3870 VCPAGFTGSRCEHSQALHCHP--EACGPDATCVNRPDGRGYTCRCHLGRSGLRCEEGVTV 3927
Query: 398 SDISFSGRRSYISLPS-SELHLIINESLSDISFSGRRSYISLPSSELHLHEACIDLEIRP 456
+ S SG SY++LP+ + H HE +D+E +P
Sbjct: 3928 TTPSLSGAGSYLALPALTNTH----------------------------HELRLDVEFKP 3959
Query: 457 TKDKGLLMYFGHPQK--NSMMTLSLQGGVLELR 487
G+L++ G ++L++ GG LE R
Sbjct: 3960 LAPDGVLLFSGGKSGPVEDFVSLAMVGGHLEFR 3992
Score = 37.4 bits (85), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 43/104 (41%), Gaps = 14/104 (13%)
Query: 304 TRAAEGRGVGQCGTSQCHNHT--C-SHGGACM----NHGATFSCLCADGWFGPLCASRYN 356
TR G +G C +C+ H+ C GAC N F LCA G++G A
Sbjct: 1549 TRTGSGLYLGHCELCECNGHSDLCHPETGACSQCQHNAAGEFCELCAPGYYGDATAGTPE 1608
Query: 357 LCDS-----TRHNCSFGATCVPL-THSYECD-CPPGRTGKFCEK 393
C T F TC L Y C C PG TG++CE+
Sbjct: 1609 DCQPCACPLTNPENMFSRTCESLGAGGYRCTACEPGYTGQYCEQ 1652
>sp|P31696|AGRIN_CHICK Agrin OS=Gallus gallus GN=AGRN PE=1 SV=3
Length = 2081
Score = 79.7 bits (195), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 77/170 (45%), Gaps = 5/170 (2%)
Query: 226 VGKNGQQCWLMVDNMGNVTSKSPGRLTQLNTKPMLYLGGHFSKNFSILPHDLPLHSGFSG 285
V +N + L VD +V+ +SP LN L++GG +++ G G
Sbjct: 1475 VNRNRRSGMLAVDGE-HVSGESPTGTDGLNLDTDLFVGGAPEDQMAVVAERTAATVGLKG 1533
Query: 286 CIFDVELSAGNVGINLYKTRAAEGRGVGQCGTSQCHNHTCSHGGAC-MNHGATFSCLCAD 344
I ++++ + + G GVG+CG CH + C HG +C + F C C
Sbjct: 1534 SIRLLDVNNQMYDLREKGSDVLYGSGVGECGNDPCHPNPCHHGASCHVKEAEMFHCECLH 1593
Query: 345 GWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYE-CDCPPGRTGKFCEK 393
+ GP CA N CD T C ATC+ L C CP GR G+FCE+
Sbjct: 1594 SYTGPTCADERNPCDPT--PCHISATCLVLPEGGAMCACPMGREGEFCER 1641
Score = 48.9 bits (115), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 54/130 (41%), Gaps = 31/130 (23%)
Query: 358 CDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCEKDESLSDISFSGRRSYISLPSSELH 417
CDS H C G TC + C CP G+ G CEK SF G+
Sbjct: 1351 CDS--HPCLHGGTCEDDGREFTCRCPAGKGGAVCEKPIRYFIPSFGGK------------ 1396
Query: 418 LIINESLSDISFSGRRSYISLPSSELHLHEACIDLEIRPTKDKGLLMYFGHPQKNSMMTL 477
S ++F ++Y H I +E R T+ GLL+Y G + ++L
Sbjct: 1397 -------SYLAFKMMKAY----------HTVRIAMEFRATELSGLLLYNGQNRGKDFISL 1439
Query: 478 SLQGGVLELR 487
+L GG +ELR
Sbjct: 1440 ALVGGFVELR 1449
Score = 45.8 bits (107), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 73/151 (48%), Gaps = 17/151 (11%)
Query: 354 RYNLCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCEK---DESLSD---ISFSGRRS 407
R + C + C G TC P SYEC C G +G CEK +++ D I+F G R+
Sbjct: 1832 RAHPCTQKPNPCQNGGTCSPRLESYECACQRGFSGAHCEKVIIEKAAGDAEAIAFDG-RT 1890
Query: 408 YISLPSSELHLIINES--LSDISFSGRRSYISLPSSELHLHEACIDLEIRPTKDKGLLMY 465
Y+ E H + +S ++I Y + P SE L +L I+ +GL+++
Sbjct: 1891 YM-----EYHNAVTKSHLSNEIPAPDALDYPAEP-SEKALQSNHFELSIKTEATQGLILW 1944
Query: 466 FGHP-QKNSMMTLSLQGGVLELRVLMLGDRP 495
G +++ + L++ G +++ + LG +P
Sbjct: 1945 SGKGLERSDYIALAIVDGFVQM-MYDLGSKP 1974
Score = 37.4 bits (85), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 12/114 (10%)
Query: 179 DFLCMSIYTSYLQPTGHMFVDTYRGPRRIFTPNTISAKSKRGGYTVRVGKNGQQCWLMVD 238
D++ ++I ++Q M D P + + I+ RV + G L V
Sbjct: 1953 DYIALAIVDGFVQ----MMYDLGSKPVVLRSTVPINTNHWTHIKAYRVQREGS---LQVG 2005
Query: 239 NMGNVTSKSPGRLTQLNTKPMLYLGGHFSKNFSILPHDLP--LHSGFSGCIFDV 290
N +T SP TQL+T L+LGG + S+ H LP +GF GCI DV
Sbjct: 2006 NEAPITGSSPLGATQLDTDGALWLGGM--ERLSVA-HKLPKAYSTGFIGCIRDV 2056
>sp|A2ASQ1|AGRIN_MOUSE Agrin OS=Mus musculus GN=Agrn PE=1 SV=1
Length = 1950
Score = 79.3 bits (194), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 97/218 (44%), Gaps = 11/218 (5%)
Query: 177 GVDFLCMSIYTSYLQPTGHMFVDTYRGPRRIFTPNTISAKSKRGGYTVRVGKNGQQCWLM 236
G DFL +++ ++Q DT GP + + + + R + + + ++ +Q L
Sbjct: 1299 GKDFLALALLDGHVQ----FRFDTGSGPAVLTS--LVPVEPGRW-HRLELSRHWRQGTLS 1351
Query: 237 VDNMGNVTSKSPGRLTQLNTKPMLYLGGHFSKNFSILPHDLPLHSGFSGCIFDVELSAGN 296
VD V +SP LN LY+GG + + + + G GCI ++++
Sbjct: 1352 VDGEAPVVGESPSGTDGLNLDTKLYVGGLPEEQVATVLDRTSVGIGLKGCIRMLDINNQQ 1411
Query: 297 VGINLYKTRAAEGRGVGQCGTSQCHNHTCSHGGACMN-HGATFSCLCADGWFGPLCASRY 355
+ ++ ++ + GVG+CG C + C G C F C C G FGP CA
Sbjct: 1412 LELSDWQRAVVQSSGVGECGDHPCSPNPCHGGALCQALEAGVFLCQCPPGRFGPTCADEK 1471
Query: 356 NLCDSTRHNCSFGATCVPLTH-SYECDCPPGRTGKFCE 392
N C + C A C L+ +C CP GR+G FCE
Sbjct: 1472 NPCQP--NPCHGSAPCHVLSRGGAKCACPLGRSGSFCE 1507
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 131/330 (39%), Gaps = 70/330 (21%)
Query: 179 DFLCMSIYTSYLQPTGHMFVDTYRGPRRIFTPNTISAKSKRGGYTVRV--GKNGQQCWLM 236
DF+ ++++ +L+ D +G I + I+ G VRV +NG++ L
Sbjct: 1571 DFVSLALHNRHLE----FRYDLGKGAAIIRSKEPIAL-----GTWVRVFLERNGRKGALQ 1621
Query: 237 VDNMGNVTSKSPGRL----TQLNTKPMLYLGGHFSKNFSILPHDLPLHSGFSGCIFDVEL 292
V + V +SP T LN K LY+GG + +FS L + SGF G I V L
Sbjct: 1622 VGDGPRVLGESPKSRKVPHTMLNLKEPLYVGG--APDFSKLARGAAVASGFDGAIQLVSL 1679
Query: 293 SAGNVGINLYKTRAAEGRGVGQCGTSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCA 352
+ + RA + + H C+
Sbjct: 1680 RGHQLLTQEHVLRAVD--------VAPFAGHPCTQ------------------------- 1706
Query: 353 SRYNLCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCEK---DESLSD---ISFSGRR 406
+ + C G +C+P +YEC CP G +G CEK ++S+ D ++F GR
Sbjct: 1707 -------AVDNPCLNGGSCIPREATYECLCPGGFSGLHCEKGIVEKSVGDLETLAFDGRT 1759
Query: 407 SYISLPSSELHLIINESLSDISFSGRRSYISLPSSELHLHEACIDLEIRPTKDKGLLMYF 466
L + + NE + + R + SE L +L +R +GL+++
Sbjct: 1760 YIEYLNAVTESELTNEIPAPETLDSRALF-----SEKALQSNHFELSLRTEATQGLVLWI 1814
Query: 467 GH-PQKNSMMTLSLQGGVLELRVLMLGDRP 495
G ++ M L++ G L+L LG +P
Sbjct: 1815 GKVGERADYMALAIVDGHLQLS-YDLGSQP 1843
Score = 37.4 bits (85), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 54/132 (40%), Gaps = 33/132 (25%)
Query: 358 CDSTRHNCSFGATCVPLT--HSYECDCPPGRTGKFCEKDESLSDISFSGRRSYISLPSSE 415
CDS C G TC L + C C GR G CEK + S +F G S+++ P+
Sbjct: 1215 CDS--QPCLHGGTCQDLDSGKGFSCSCTAGRAGTVCEKVQLPSVPAFKGH-SFLAFPT-- 1269
Query: 416 LHLIINESLSDISFSGRRSYISLPSSELHLHEACIDLEIRPTKDKGLLMYFGHPQKNSMM 475
R+Y H + LE R + +GLL+Y G+ + +
Sbjct: 1270 ----------------LRAY----------HTLRLALEFRALETEGLLLYNGNARGKDFL 1303
Query: 476 TLSLQGGVLELR 487
L+L G ++ R
Sbjct: 1304 ALALLDGHVQFR 1315
Score = 36.2 bits (82), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 178 VDFLCMSIYTSYLQPTGHMFVDTYRGPRRIFTPNTISAKSKRGGYTVRVGKNGQQCWLMV 237
D++ ++I GH+ + G + + +T+ + R VR + ++ L V
Sbjct: 1821 ADYMALAIVD------GHLQLSYDLGSQPVVLRSTVKVNTNRW-LRVRAHREHREGSLQV 1873
Query: 238 DNMGNVTSKSPGRLTQLNTKPMLYLGGHFSKNFSILP--HDLPLH--SGFSGCIFDV 290
N VT SP TQL+T L+LGG LP LP +GF GC+ DV
Sbjct: 1874 GNEAPVTGSSPLGATQLDTDGALWLGG-----LQKLPVGQALPKAYGTGFVGCLRDV 1925
>sp|Q05793|PGBM_MOUSE Basement membrane-specific heparan sulfate proteoglycan core protein
OS=Mus musculus GN=Hspg2 PE=1 SV=1
Length = 3707
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 123/275 (44%), Gaps = 50/275 (18%)
Query: 222 YTVRVGKNGQQCWLMVDNMGNVTSKSPGRLTQLNTKPMLYLGGHFSKNFSILPHDLPLHS 281
+TV + ++ Q L+V N+ V S G+ L+ LYLGG+ ++ +P L S
Sbjct: 3076 HTVTLLRSLTQGSLIVGNLAPVNGTSQGKFQGLDLNEELYLGGY--PDYGAIP-KAGLSS 3132
Query: 282 GFSGCIFDVELSAGNV---GINLYKTRAAEGRGVGQCGTSQCHNHTCSHGGACMN-HGAT 337
GF GC+ ++ + + +NL G+ C T C + C +GG C + ++
Sbjct: 3133 GFVGCVRELRIQGEEIVFHDVNLTT------HGISHCPT--CQDRPCQNGGQCQDSESSS 3184
Query: 338 FSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCV--PLTHSYECDCPPGRTGKFCEKDE 395
++C+C G+ R C +T + ATCV P Y C C GR+G CE+
Sbjct: 3185 YTCVCPAGFTAAAVNIR-KPCTATP-SLWADATCVNRPDGRGYTCRCHLGRSGVRCEEGV 3242
Query: 396 SLSDISFSGRRSYISLPS-SELHLIINESLSDISFSGRRSYISLPSSELHLHEACIDLEI 454
+++ S SG SY++LP+ + H HE +D+E
Sbjct: 3243 TVTTPSMSGAGSYLALPALTNTH----------------------------HELRLDVEF 3274
Query: 455 RPTKDKGLLMYFGHPQK--NSMMTLSLQGGVLELR 487
+P + G+L++ G ++L++ GG LE R
Sbjct: 3275 KPLEPNGILLFSGGKSGPVEDFVSLAMVGGHLEFR 3309
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 114/271 (42%), Gaps = 33/271 (12%)
Query: 225 RVGKNGQQCWLMVDNMGNVTSKSPGRLTQLNTKPMLYLGGHFSKNFSILPHDLPLHSGFS 284
R+ K+G L VD V SPG+ LN +LYLGG + + P + + F
Sbjct: 3337 RLNKDGS---LRVDGGRPVLRSSPGKSQGLNLHTLLYLGG-VEPSVQLSPATN-MSAHFH 3391
Query: 285 GCIFDVELSAGNVGINLYKTRAAEG-RGVGQC-GTSQCHNHTCSHGGACMNHGA-TFSCL 341
GC+ +V ++ G L T + G +GVGQC +S C C +G CM G F CL
Sbjct: 3392 GCVGEVSVN----GKRLDLTYSFLGSQGVGQCYDSSPCERQPCRNGATCMPAGEYEFQCL 3447
Query: 342 CADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCEKDESL---- 397
C DG+ G LC N C C G TC C C PG +G C++
Sbjct: 3448 CQDGFKGDLCEHEENPCQ-LHEPCLNGGTC----RGARCLCLPGFSGPRCQQGAGYGVVE 3502
Query: 398 SDISFSGRRSYISLPSSELHLIINESLSDISFSGRRSYISLPSSELHLHEACIDLEIRPT 457
SD G + + N L S RS +P + I+ E+R +
Sbjct: 3503 SDWHPEGSGGNDAPGQYGAYFYDNGFLGLPGNSFSRSLPEVPET--------IEFEVRTS 3554
Query: 458 KDKGLLMYFGHPQKNS----MMTLSLQGGVL 484
GLL++ G ++ S ++L LQ G L
Sbjct: 3555 TADGLLLWQGVVREASRSKDFISLGLQDGHL 3585
Score = 39.3 bits (90), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 44/104 (42%), Gaps = 14/104 (13%)
Query: 304 TRAAEGRGVGQCGTSQCHNHT--C-SHGGACM----NHGATFSCLCADGWFGPLCASRYN 356
TR G +GQC +C+ H+ C GAC N F LCA G++G A
Sbjct: 1549 TRTGSGLYLGQCELCECNGHSDLCHPETGACSRCQHNTAGEFCELCATGYYGDATAGTPE 1608
Query: 357 LCDS-----TRHNCSFGATCVPL-THSYECD-CPPGRTGKFCEK 393
C T F TC L Y C C PG TG++CE+
Sbjct: 1609 DCQPCACPLTNPENMFSRTCESLGAGGYRCTACEPGYTGQYCEQ 1652
Score = 37.4 bits (85), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 228 KNGQQCWLMVDNMGNVTSKSPGRLTQLNTKPMLYLGGHFSKNFSILPHDLPLHSGFSGCI 287
+ GQ+ + VD VT +SPG +NTK ++Y+GG + + + L SG +GCI
Sbjct: 3616 REGQRGSIQVDGEDLVTGRSPGPNVAVNTKDIIYIGG--APDVATLTRGK-FSSGITGCI 3672
Query: 288 FDVELSAGNVG 298
++ L G
Sbjct: 3673 KNLVLHTARPG 3683
Score = 35.4 bits (80), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 42/106 (39%), Gaps = 6/106 (5%)
Query: 62 EIGQASYSSSMSGLSSFSAYVIPANIHHCFELKFRFVPNSFDQIALLAFIGQDYQHDAIT 121
E G + SMSG S+ A N HH L F P + +L F G + +
Sbjct: 3239 EEGVTVTTPSMSGAGSYLALPALTNTHHELRLDVEFKP--LEPNGILLFSGG--KSGPVE 3294
Query: 122 DHLAVSFIKGYVVLTWNLGSGWYLVYFEHTYLFILSRLRSAQDTRL 167
D ++++ + G++ + LGSG L L R RL
Sbjct: 3295 DFVSLAMVGGHLEFRYELGSG--LAVLRSHEPLALGRWHRVSAERL 3338
>sp|P25304|AGRIN_RAT Agrin OS=Rattus norvegicus GN=Agrn PE=1 SV=2
Length = 1959
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 107/236 (45%), Gaps = 16/236 (6%)
Query: 177 GVDFLCMSIYTSYLQPTGHMFVDTYRGPRRIFTPNTISAKSKRGGYTVRVGKNGQQCWLM 236
G DFL +++ +Q DT GP + + + + R + + + ++ +Q L
Sbjct: 1308 GKDFLALALLDGRVQ----FRFDTGSGPAVLTS--LVPVEPGRW-HRLELSRHWRQGTLS 1360
Query: 237 VDNMGNVTSKSPGRLTQLNTKPMLYLGGHFSKNFSILPHDLPLHSGFSGCIFDVELSAGN 296
VD V +SP LN LY+GG + +++ + G GCI ++++
Sbjct: 1361 VDGETPVVGESPSGTDGLNLDTNLYVGGIPEEQVAMVLDRTSVGVGLKGCIRMLDINNQQ 1420
Query: 297 VGINLYKTRAAEGRGVGQCGTSQCHNHTCSHGGACMN-HGATFSCLCADGWFGPLCASRY 355
+ ++ ++ A + GVG+CG C + C G C F C C G FGP CA
Sbjct: 1421 LELSDWQRAAVQSSGVGECGDHPCLPNPCHGGALCQALEAGMFLCQCPPGRFGPTCADEK 1480
Query: 356 NLCDSTRHNCSFGATCVPLTH-SYECDCPPGRTGKFCEKDESLSDISFSGRRSYIS 410
+ C + C A C L+ +C+CP GR+G FC+ + + +G R +++
Sbjct: 1481 SPCQP--NPCHGAAPCRVLSSGGAKCECPLGRSGTFCQ-----TVLETAGSRPFLA 1529
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 138/333 (41%), Gaps = 76/333 (22%)
Query: 179 DFLCMSIYTSYLQPTGHMFVDTYRGPRRIFTPNTISAKSKRGGYTVRV--GKNGQQCWLM 236
DF+ ++++ +L+ D +G I + I+ G VRV +NG++ L
Sbjct: 1580 DFVSLALHNRHLE----FCYDLGKGAAVIRSKEPIAL-----GTWVRVFLERNGRKGALQ 1630
Query: 237 VDNMGNVTSKSPGRL----TQLNTKPMLYLGGHFSKNFSILPHDLPLHSGFSGCIFDVEL 292
V + V +SP T LN K LY+GG + +FS L + SGFSG I V L
Sbjct: 1631 VGDGPRVLGESPKSRKVPHTMLNLKEPLYIGG--APDFSKLARGAAVSSGFSGVIQLVSL 1688
Query: 293 SAGNVGINLYKTRAAEGRGVGQCGTSQCHNHTCSH--GGACMNHGATFSCLCADGWFGPL 350
+ + RA + S +H C+ G C+N
Sbjct: 1689 RGHQLLTQEHVLRAVD--------VSPFADHPCTQALGNPCLN----------------- 1723
Query: 351 CASRYNLCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCEK---DESLSD---ISFSG 404
G +CVP +YEC CP G +G CEK ++S+ D ++F G
Sbjct: 1724 -----------------GGSCVPREATYECLCPGGFSGLHCEKGLVEKSVGDLETLAFDG 1766
Query: 405 RRSYISLPSSELH-LIINESLSDISFSGRRSYISLPSSELHLHEACIDLEIRPTKDKGLL 463
R+YI ++ + + NE + + R + SE L +L +R +GL+
Sbjct: 1767 -RTYIEYLNAVIESELTNEIPAPETLDSRALF-----SEKALQSNHFELSLRTEATQGLV 1820
Query: 464 MYFGH-PQKNSMMTLSLQGGVLELRVLMLGDRP 495
++ G ++ M L++ G L+L LG +P
Sbjct: 1821 LWIGKAAERADYMALAIVDGHLQLS-YDLGSQP 1852
Score = 35.4 bits (80), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 53/132 (40%), Gaps = 33/132 (25%)
Query: 358 CDSTRHNCSFGATCVPLT--HSYECDCPPGRTGKFCEKDESLSDISFSGRRSYISLPSSE 415
CDS C G TC + C C GR G CEK + S +F G S+++ P+
Sbjct: 1224 CDS--QPCLHGGTCQDQDSGKGFTCSCTAGRGGSVCEKVQPPSMPAFKGH-SFLAFPT-- 1278
Query: 416 LHLIINESLSDISFSGRRSYISLPSSELHLHEACIDLEIRPTKDKGLLMYFGHPQKNSMM 475
R+Y H + LE R + +GLL+Y G+ + +
Sbjct: 1279 ----------------LRAY----------HTLRLALEFRALETEGLLLYNGNARGKDFL 1312
Query: 476 TLSLQGGVLELR 487
L+L G ++ R
Sbjct: 1313 ALALLDGRVQFR 1324
Score = 35.4 bits (80), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 178 VDFLCMSIYTSYLQPTGHMFVDTYRGPRRIFTPNTISAKSKRGGYTVRVGKNGQQCWLMV 237
D++ ++I GH+ + G + + +T+ + R +R + ++ L V
Sbjct: 1830 ADYMALAIVD------GHLQLSYDLGSQPVVLRSTVKVNTNRW-LRIRAHREHREGSLQV 1882
Query: 238 DNMGNVTSKSPGRLTQLNTKPMLYLGGHFSKNFSILP--HDLPLH--SGFSGCIFDV 290
N VT SP TQL+T L+LGG LP LP +GF GC+ DV
Sbjct: 1883 GNEAPVTGSSPLGATQLDTDGALWLGG-----LQKLPVGQALPKAYGTGFVGCLRDV 1934
>sp|O00468|AGRIN_HUMAN Agrin OS=Homo sapiens GN=AGRN PE=1 SV=5
Length = 2067
Score = 75.1 bits (183), Expect = 1e-12, Method: Composition-based stats.
Identities = 57/218 (26%), Positives = 93/218 (42%), Gaps = 11/218 (5%)
Query: 177 GVDFLCMSIYTSYLQPTGHMFVDTYRGPRRIFTPNTISAKSKRGGYTVRVGKNGQQCWLM 236
G DFL +++ +Q + DT GP + + + + + + ++ ++ L
Sbjct: 1417 GKDFLALALLDGRVQ----LRFDTGSGPAVLTSAVPVEPGQ---WHRLELSRHWRRGTLS 1469
Query: 237 VDNMGNVTSKSPGRLTQLNTKPMLYLGGHFSKNFSILPHDLPLHSGFSGCIFDVELSAGN 296
VD V +SP LN L++GG ++ + +G GCI ++++
Sbjct: 1470 VDGETPVLGESPSGTDGLNLDTDLFVGGVPEDQAAVALERTFVGAGLRGCIRLLDVNNQR 1529
Query: 297 VGINLYKTRAAEGRGVGQCGTSQCHNHTCSHGGACMN-HGATFSCLCADGWFGPLCASRY 355
+ + + A G GVG+CG C + C G C N F C C G GP CA
Sbjct: 1530 LELGIGPGAATRGSGVGECGDHPCLPNPCHGGAPCQNLEAGRFHCQCPPGRVGPTCADEK 1589
Query: 356 NLCDSTRHNCSFGATCVPLTH-SYECDCPPGRTGKFCE 392
+ C + C A C L +C+CP GR G FC+
Sbjct: 1590 SPCQP--NPCHGAAPCRVLPEGGAQCECPLGREGTFCQ 1625
Score = 51.6 bits (122), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/137 (29%), Positives = 62/137 (45%), Gaps = 7/137 (5%)
Query: 220 GGYT-VRVGKNGQQCWLMVDNMGNVTSKSPGRL----TQLNTKPMLYLGGHFSKNFSILP 274
G +T V + +NG++ L V + V +SP T LN K LY+GG + +FS L
Sbjct: 1722 GAWTRVSLERNGRKGALRVGDGPRVLGESPKSRKVPHTVLNLKEPLYVGG--APDFSKLA 1779
Query: 275 HDLPLHSGFSGCIFDVELSAGNVGINLYKTRAAEGRGVGQCGTSQCHNHTCSHGGACMNH 334
+ SGF G I V L + + R + ++ H C +G +C+
Sbjct: 1780 RAAAVSSGFDGAIQLVSLGGRQLLTPEHVLRQVDVTSFAGHPCTRASGHPCLNGASCVPR 1839
Query: 335 GATFSCLCADGWFGPLC 351
A + CLC G+ GP C
Sbjct: 1840 EAAYVCLCPGGFSGPHC 1856
Score = 46.2 bits (108), Expect = 6e-04, Method: Composition-based stats.
Identities = 38/132 (28%), Positives = 55/132 (41%), Gaps = 33/132 (25%)
Query: 358 CDSTRHNCSFGATCV--PLTHSYECDCPPGRTGKFCEKDESLSDISFSGRRSYISLPSSE 415
CDS C G TC L + C CP GR G CEK +F G RS+++ P+
Sbjct: 1333 CDS--QPCFHGGTCQDWALGGGFTCSCPAGRGGAVCEKVLGAPVPAFEG-RSFLAFPT-- 1387
Query: 416 LHLIINESLSDISFSGRRSYISLPSSELHLHEACIDLEIRPTKDKGLLMYFGHPQKNSMM 475
R+Y H + LE R + +GLL+Y G+ + +
Sbjct: 1388 ----------------LRAY----------HTLRLALEFRALEPQGLLLYNGNARGKDFL 1421
Query: 476 TLSLQGGVLELR 487
L+L G ++LR
Sbjct: 1422 ALALLDGRVQLR 1433
Score = 33.5 bits (75), Expect = 3.8, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 33/93 (35%), Gaps = 21/93 (22%)
Query: 310 RGVGQCGTSQCHNHTCSHGGACMNHGATFS--CLCADGWFGPLC---------------- 351
RG+ G S C +C GA + + C C G GP C
Sbjct: 834 RGIVTDGRSGCTPCSCDPQGAVRDDCEQMTGLCSCKPGVAGPKCGQCPDGRALGPAGCEA 893
Query: 352 -ASRYNLCDSTRHNCSFGATCVPLTHSYECDCP 383
AS C R C FGA CV + S C CP
Sbjct: 894 DASAPATCAEMR--CEFGARCVEESGSAHCVCP 924
>sp|Q90404|AGRIN_DIPOM Agrin (Fragment) OS=Diplobatis ommata GN=AGRN PE=2 SV=1
Length = 1328
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 115/264 (43%), Gaps = 23/264 (8%)
Query: 228 KNGQQCWLMVDNMGNVTSKSPGRLTQLNTKPMLYLGGHFSKNFSILPHDLPLHSGFSGCI 287
+N + L VD ++ +SP LN L+LGG +++ G GCI
Sbjct: 738 RNRRSGMLSVDGEPHLIGESPPGTDGLNLDTDLFLGGTPEDEMTLVTERTTATKGLQGCI 797
Query: 288 FDVELSAGNVGINLYKTRAAEGRGVGQCGTSQCHNHTCSHGGAC-MNHGATFSCLCADGW 346
++++ + G GVG+CG + C + C + G C M F C +
Sbjct: 798 RLLDVNNLIYDLQERSNDVLYGSGVGECGNNPCSPNPCKNRGKCHMKEAEMFHCESVGEF 857
Query: 347 FGPLCASRYNLCDSTRHNCSFGATCVPLTH-SYECDCPPGRTGKFCEKDESLSDISFSGR 405
GP CA ++N CD + C A C+ L +C+CP GR G+ CE+ +S+
Sbjct: 858 SGPTCADKHNPCDP--NPCHQSANCMVLPEGGSKCECPMGREGELCER---VSEAEQDQG 912
Query: 406 RSYISLPSSELHLIINESLSDISFSGRRSYISLPSSELHLHEACIDLEIRPTKDKGLLMY 465
+++I E + LS + +G +++S +L + I L P G++ Y
Sbjct: 913 KAFI----PEFN-----GLSYLEMNGIHTFVSDLLQKLSME--VIFLAKDPN---GMIFY 958
Query: 466 FGHPQ--KNSMMTLSLQGGVLELR 487
G + ++L+L+ G LE +
Sbjct: 959 NGQKTDGRGDFVSLNLRDGYLEFK 982
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 67/148 (45%), Gaps = 26/148 (17%)
Query: 354 RYNLCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCEKDESLSDISFSGRRSYISLPS 413
R++ C TR+ C G C P Y+C C G +G CEK +L + S SG S
Sbjct: 1097 RWHACTKTRNPCQNGGVCSPRLREYDCMCQRGFSGPQCEK--ALEEKSASGSES------ 1148
Query: 414 SELHLIINESLSDISFSGR---RSYISLPSSELHLHEACIDLEIRPTKDKGLLMYFGH-P 469
++F+GR + ++ SE + ++ I+ KGL+++ G
Sbjct: 1149 -------------VAFNGRTFIEYHNTVTRSEKAVQVNYFEMSIKTEATKGLILWSGKIA 1195
Query: 470 QKNSMMTLSLQGGVLELRVLMLGDRPKT 497
+K+ + L++ G +++ LG +P T
Sbjct: 1196 EKSDYIALAVVDGFVQM-TYDLGSKPVT 1222
Score = 39.7 bits (91), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 59/137 (43%), Gaps = 17/137 (12%)
Query: 224 VRVGKNGQQCWLMVDNMGNVTSKSPGRL----TQLNTKPMLYLGGHFSKNFSILPHDLPL 279
V V +NG++ + ++ V+ +SP T LN K Y+GG + +F+ +
Sbjct: 1006 VTVERNGRKGLMKINKDELVSGESPKSRKAPHTALNLKEAFYVGG--APDFNKFARAAGI 1063
Query: 280 HSGFSGCIFDVELSAGNVGINLYKTRAAEGRGVGQCGTSQCHNHT-----CSHGGACMNH 334
SGF+G I + L + I L K R + + H T C +GG C
Sbjct: 1064 ISGFTGAIQKLSLKS----IPLLKKENI--RNAMEISNFRWHACTKTRNPCQNGGVCSPR 1117
Query: 335 GATFSCLCADGWFGPLC 351
+ C+C G+ GP C
Sbjct: 1118 LREYDCMCQRGFSGPQC 1134
Score = 36.2 bits (82), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Query: 349 PLCASRYNLCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCEKDESLSDISFSGRRSY 408
P + CDS C G TC SY C CP GR G CE+ F G RSY
Sbjct: 603 PATVKVHRPCDS--QPCLHGGTCEDDGVSYTCSCPAGRGGAVCERTIVYFIPEFGG-RSY 659
Query: 409 ISLPSSELHLIINESL 424
++ + + + + S+
Sbjct: 660 LAFKTMKAYYTVRISM 675
Score = 33.9 bits (76), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 320 CHNHTCSHGGACMNHGATFSCLCADGWFGPLC 351
C + C HGG C + G +++C C G G +C
Sbjct: 612 CDSQPCLHGGTCEDDGVSYTCSCPAGRGGAVC 643
>sp|O75094|SLIT3_HUMAN Slit homolog 3 protein OS=Homo sapiens GN=SLIT3 PE=2 SV=3
Length = 1523
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 80/188 (42%), Gaps = 21/188 (11%)
Query: 325 CSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDCPP 384
C H C+ FSC C G+ G LC + + D H C GA CV + Y C CP
Sbjct: 1045 CQHEAKCIPLDKGFSCECVPGYSGKLCETDND--DCVAHKCRHGAQCVDTINGYTCTCPQ 1102
Query: 385 GRTGKFCEKDESLSDISFSGRRSYISLPSSELHLIIN---------------ESLSDISF 429
G +G FCE + + S Y ++ ++ E L ++F
Sbjct: 1103 GFSGPFCEHPPPMVLLQTSPCDQYECQNGAQCIVVQQEPTCRCPPGFAGPRCEKLITVNF 1162
Query: 430 SGRRSYISLPSSELHLHEACIDLEIRPTKDKGLLMYFGHPQKNSMMTLSLQGGVLELRVL 489
G+ SY+ L S+++ +A I L++ KD G+L+Y G N + L L G + L
Sbjct: 1163 VGKDSYVELASAKVR-PQANISLQVATDKDNGILLYKG---DNDPLALELYQGHVRLVYD 1218
Query: 490 MLGDRPKT 497
L P T
Sbjct: 1219 SLSSPPTT 1226
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%)
Query: 320 CHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYE 379
C ++ C + C++ + C+C + G LC + C + C A C+PL +
Sbjct: 1000 CEDNDCENNATCVDGINNYVCICPPNYTGELCDEVIDHCVPELNLCQHEAKCIPLDKGFS 1059
Query: 380 CDCPPGRTGKFCEKD 394
C+C PG +GK CE D
Sbjct: 1060 CECVPGYSGKLCETD 1074
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 320 CHNHTCSHGGACM---NHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTH 376
C + C HGG C +H FSC C G+ G C + C+ ++C ATCV +
Sbjct: 959 CIQNPCQHGGTCHLSDSHKDGFSCSCPLGFEGQRCEINPDDCED--NDCENNATCVDGIN 1016
Query: 377 SYECDCPPGRTGKFCEK 393
+Y C CPP TG+ C++
Sbjct: 1017 NYVCICPPNYTGELCDE 1033
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 67/169 (39%), Gaps = 19/169 (11%)
Query: 243 VTSKSPGRLTQLNTKPM------LYLGG-HFSKNFSILPH--DLPLHSGFSGCIFDVELS 293
V +P L +L +P LYLGG S S L D PL GF GCI +V +
Sbjct: 1254 VDKGTPKSLGKLQKQPAVGINSPLYLGGIPTSTGLSALRQGTDRPL-GGFHGCIHEVRI- 1311
Query: 294 AGNVGINLYKTRAAEGRGVGQCGTSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCAS 353
N + +K + GV G C C HG + C C GW GPLC
Sbjct: 1312 --NNELQDFKALPPQSLGVSP-GCKSCT--VCKHGLCRSVEKDSVVCECRPGWTGPLCDQ 1366
Query: 354 RYNLCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCE-KDESLSDIS 401
H C G CV SY C C G G C+ K++S + S
Sbjct: 1367 EARD-PCLGHRCHHGK-CVATGTSYMCKCAEGYGGDLCDNKNDSANACS 1413
>sp|O88280|SLIT3_RAT Slit homolog 3 protein OS=Rattus norvegicus GN=Slit3 PE=2 SV=1
Length = 1523
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 80/188 (42%), Gaps = 21/188 (11%)
Query: 325 CSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDCPP 384
C H C++ F C C G+ G LC + + D H C GA CV + Y C CP
Sbjct: 1045 CQHEAKCISLDKGFRCECVPGYSGKLCETDND--DCVAHKCRHGAQCVDAVNGYTCICPQ 1102
Query: 385 GRTGKFCEKDESLSDISFSGRRSYISLPSSELHLIIN---------------ESLSDISF 429
G +G FCE + + S Y ++ ++ E L ++F
Sbjct: 1103 GFSGLFCEHPPPMVLLQTSPCDQYECQNGAQCIVVQQEPTCRCPPGFAGPRCEKLITVNF 1162
Query: 430 SGRRSYISLPSSELHLHEACIDLEIRPTKDKGLLMYFGHPQKNSMMTLSLQGGVLELRVL 489
G+ SY+ L S+++ +A I L++ KD G+L+Y G N + L L G + L
Sbjct: 1163 VGKDSYVELASAKVR-PQANISLQVATDKDNGILLYKG---DNDPLALELYQGHVRLVYD 1218
Query: 490 MLGDRPKT 497
L P T
Sbjct: 1219 SLSSPPTT 1226
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 66/160 (41%), Gaps = 18/160 (11%)
Query: 243 VTSKSPGRLTQLNTKPM------LYLGG-HFSKNFSILPH--DLPLHSGFSGCIFDVELS 293
V +P L +L +P LYLGG S S L D PL GF GCI +V +
Sbjct: 1254 VDKGAPKSLGKLQKQPAVGINSPLYLGGIPTSTGLSALRQGADRPL-GGFHGCIHEVRI- 1311
Query: 294 AGNVGINLYKTRAAEGRGVGQCGTSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCAS 353
N + +K + GV G C C HG + C C GW GPLC
Sbjct: 1312 --NNELQDFKALPPQSLGVSP-GCKSCT--VCRHGLCRSVEKDSVVCECHPGWTGPLCDQ 1366
Query: 354 RYNLCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCEK 393
H+CS G TCV +SY C C G G C++
Sbjct: 1367 EAQD-PCLGHSCSHG-TCVATGNSYVCKCAEGYEGPLCDQ 1404
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 37/75 (49%)
Query: 320 CHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYE 379
C ++ C + C++ ++C+C + G LC + C + C A C+ L +
Sbjct: 1000 CEDNDCENSATCVDGINNYACVCPPNYTGELCDEVIDYCVPEMNLCQHEAKCISLDKGFR 1059
Query: 380 CDCPPGRTGKFCEKD 394
C+C PG +GK CE D
Sbjct: 1060 CECVPGYSGKLCETD 1074
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 320 CHNHTCSHGGAC---MNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTH 376
C + C HGG C +H FSC C G+ G C + C+ ++C ATCV +
Sbjct: 959 CVQNPCQHGGTCHLSESHRDGFSCSCPLGFEGQRCEINPDDCED--NDCENSATCVDGIN 1016
Query: 377 SYECDCPPGRTGKFCEK 393
+Y C CPP TG+ C++
Sbjct: 1017 NYACVCPPNYTGELCDE 1033
>sp|Q9WVB4|SLIT3_MOUSE Slit homolog 3 protein OS=Mus musculus GN=Slit3 PE=2 SV=2
Length = 1523
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 80/188 (42%), Gaps = 21/188 (11%)
Query: 325 CSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDCPP 384
C H C++ F C C G+ G LC + + D H C GA CV + Y C CP
Sbjct: 1045 CQHEAKCISLDKGFRCECVPGYSGKLCETNND--DCVAHKCRHGAQCVDEVNGYTCICPQ 1102
Query: 385 GRTGKFCEKDESLSDISFSGRRSYISLPSSELHLIIN---------------ESLSDISF 429
G +G FCE + + S Y ++ ++ E L ++F
Sbjct: 1103 GFSGLFCEHPPPMVLLQTSPCDQYECQNGAQCIVVQQEPTCRCPPGFAGPRCEKLITVNF 1162
Query: 430 SGRRSYISLPSSELHLHEACIDLEIRPTKDKGLLMYFGHPQKNSMMTLSLQGGVLELRVL 489
G+ SY+ L S+++ +A I L++ KD G+L+Y G N + L L G + L
Sbjct: 1163 VGKDSYVELASAKVR-PQANISLQVATDKDNGILLYKG---DNDPLALELYQGHVRLVYD 1218
Query: 490 MLGDRPKT 497
L P T
Sbjct: 1219 SLSSPPTT 1226
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 37/75 (49%)
Query: 320 CHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYE 379
C ++ C + C++ ++CLC + G LC + C + C A C+ L +
Sbjct: 1000 CEDNDCENSATCVDGINNYACLCPPNYTGELCDEVIDYCVPEMNLCQHEAKCISLDKGFR 1059
Query: 380 CDCPPGRTGKFCEKD 394
C+C PG +GK CE +
Sbjct: 1060 CECVPGYSGKLCETN 1074
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 69/169 (40%), Gaps = 19/169 (11%)
Query: 243 VTSKSPGRLTQLNTKPM------LYLGG-HFSKNFSILPH--DLPLHSGFSGCIFDVELS 293
V +P L +L +P LYLGG S S L D PL GF GCI +V +
Sbjct: 1254 VDKGAPKSLGKLQKQPAVGSNSPLYLGGIPTSTGLSALRQGADRPL-GGFHGCIHEVRI- 1311
Query: 294 AGNVGINLYKTRAAEGRGVGQCGTSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCAS 353
N + +K + GV G C C HG + C C GW GPLC
Sbjct: 1312 --NNELQDFKALPPQSLGVSP-GCKSCT--VCRHGLCRSVEKDSVVCECHPGWTGPLCDQ 1366
Query: 354 RYNLCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFC-EKDESLSDIS 401
H+C G TC+ SY C C G G C +K++S S S
Sbjct: 1367 EARD-PCLGHSCRHG-TCMATGDSYVCKCAEGYGGALCDQKNDSASACS 1413
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 320 CHNHTCSHGGAC---MNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTH 376
C + C HGG C N FSC C G+ G C + C+ ++C ATCV +
Sbjct: 959 CVQNPCEHGGTCHLSENLRDGFSCSCPLGFEGQRCEINPDDCED--NDCENSATCVDGIN 1016
Query: 377 SYECDCPPGRTGKFCEK 393
+Y C CPP TG+ C++
Sbjct: 1017 NYACLCPPNYTGELCDE 1033
>sp|O94813|SLIT2_HUMAN Slit homolog 2 protein OS=Homo sapiens GN=SLIT2 PE=1 SV=1
Length = 1529
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 88/223 (39%), Gaps = 23/223 (10%)
Query: 189 YLQPTGHMFVDTYRGPRRIFTPNTISAKSKRGGYTVRVGKNG-----------QQCWLMV 237
Y H+ V+ YRG R+ + Y+V +G Q L V
Sbjct: 1199 YKGDKDHIAVELYRG--RVRASYDTGSHPASAIYSVETINDGNFHIVELLALDQSLSLSV 1256
Query: 238 DNMGNVTSKSPGRLTQLNTKPMLYLGGHFSKNFSILPHDLPLHSG--FSGCIFDVELSAG 295
D + + + LN LY+GG K+ P +G F GCI ++ +++
Sbjct: 1257 DGGNPKIITNLSKQSTLNFDSPLYVGGMPGKSNVASLRQAPGQNGTSFHGCIRNLYINS- 1315
Query: 296 NVGINLYKTRAAEGRGVGQCGTSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRY 355
L + + G CH C+HG + A F+C C +GW GPLC R
Sbjct: 1316 ----ELQDFQKVPMQTGILPGCEPCHKKVCAHGTCQPSSQAGFTCECQEGWMGPLCDQRT 1371
Query: 356 NLCDSTRHNCSFGATCVPLTH-SYECDCPPGRTGKFCEKDESL 397
N D N TC+P+ SY C C G G C+++E L
Sbjct: 1372 N--DPCLGNKCVHGTCLPINAFSYSCKCLEGHGGVLCDEEEDL 1412
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 67/158 (42%), Gaps = 18/158 (11%)
Query: 325 CSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDCPP 384
C H C+ F C C G+ G C ++ C + C GA C + Y C CP
Sbjct: 1047 CQHDSKCILTPKGFKCDCTPGYVGEHCDIDFDDCQDNK--CKNGAHCTDAVNGYTCICPE 1104
Query: 385 GRTGKFCEKDESLSDISFSGRRSYISLPSSELHLIIN---------------ESLSDISF 429
G +G FCE + S ++ ++ + IN E L ++F
Sbjct: 1105 GYSGLFCEFSPPMVLPRTSPCDNFDCQNGAQCIVRINEPICQCLPGYQGEKCEKLVSVNF 1164
Query: 430 SGRRSYISLPSSELHLHEACIDLEIRPTKDKGLLMYFG 467
+ SY+ +PS+++ + I L+I +D G+L+Y G
Sbjct: 1165 INKESYLQIPSAKVR-PQTNITLQIATDEDSGILLYKG 1201
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 320 CHNHTCSHGGAC-MNHGAT--FSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTH 376
C ++ C HGG C + G F C+CADG+ G C N+ D ++C +TCV +
Sbjct: 961 CISNPCKHGGTCHLKEGEEDGFWCICADGFEGENC--EVNVDDCEDNDCENNSTCVDGIN 1018
Query: 377 SYECDCPPGRTGKFCEK 393
+Y C CPP TG+ CE+
Sbjct: 1019 NYTCLCPPEYTGELCEE 1035
Score = 52.4 bits (124), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 37/75 (49%)
Query: 320 CHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYE 379
C ++ C + C++ ++CLC + G LC + + C + C + C+ ++
Sbjct: 1002 CEDNDCENNSTCVDGINNYTCLCPPEYTGELCEEKLDFCAQDLNPCQHDSKCILTPKGFK 1061
Query: 380 CDCPPGRTGKFCEKD 394
CDC PG G+ C+ D
Sbjct: 1062 CDCTPGYVGEHCDID 1076
>sp|Q9R1B9|SLIT2_MOUSE Slit homolog 2 protein OS=Mus musculus GN=Slit2 PE=2 SV=2
Length = 1521
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 67/151 (44%), Gaps = 10/151 (6%)
Query: 250 RLTQLNTKPMLYLGGHFSKNFSILPHDLPLHSG--FSGCIFDVELSAGNVGINLYKTRAA 307
+ + LN LY+GG KN P +G F GCI ++ +++ L R
Sbjct: 1261 KQSTLNFDSPLYVGGMPGKNNVASLRQAPGQNGTSFHGCIRNLYINS-----ELQDFRKM 1315
Query: 308 EGRGVGQCGTSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSF 367
+ G CH C+HG + + F+C C +GW GPLC R N D N
Sbjct: 1316 PMQTGILPGCEPCHKKVCAHGMCQPSSQSGFTCECEEGWMGPLCDQRTN--DPCLGNKCV 1373
Query: 368 GATCVPLTH-SYECDCPPGRTGKFCEKDESL 397
TC+P+ SY C C G G C+++E L
Sbjct: 1374 HGTCLPINAFSYSCKCLEGHGGVLCDEEEDL 1404
Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 66/158 (41%), Gaps = 18/158 (11%)
Query: 325 CSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDCPP 384
C H C+ F C C G+ G C ++ C + C GA C + Y C CP
Sbjct: 1039 CQHDSKCILTPKGFKCDCTPGYIGEHCDIDFDDCQDNK--CKNGAHCTDAVNGYTCVCPE 1096
Query: 385 GRTGKFCEKDESLSDISFSGRRSYISLPSSELHLIIN---------------ESLSDISF 429
G +G FCE + S ++ ++ + IN E L ++F
Sbjct: 1097 GYSGLFCEFSPPMVLPRTSPCDNFDCQNGAQCIIRINEPICQCLPGYLGEKCEKLVSVNF 1156
Query: 430 SGRRSYISLPSSELHLHEACIDLEIRPTKDKGLLMYFG 467
+ SY+ +PS+++ I L+I +D G+L+Y G
Sbjct: 1157 VNKESYLQIPSAKVRPQTN-ITLQIATDEDSGILLYKG 1193
Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 63/136 (46%), Gaps = 11/136 (8%)
Query: 267 SKNFSIL-PHDLPLHSGFSGCIFDVELSAG---NVGINLYKTRAAEGRGVGQCGTS--QC 320
SK F+ P D+ + + + C+ + + G N ++ Y+ G C C
Sbjct: 894 SKKFTCQGPVDITIQAKCNPCLSNPCKNDGTCNNDPVDFYRCTCPYGFKGQDCDVPIHAC 953
Query: 321 HNHTCSHGGAC---MNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHS 377
++ C HGG C A F C CADG+ G C N+ D ++C +TCV ++
Sbjct: 954 ISNPCKHGGTCHLKEGENAGFWCTCADGFEGENC--EVNIDDCEDNDCENNSTCVDGINN 1011
Query: 378 YECDCPPGRTGKFCEK 393
Y C CPP TG+ CE+
Sbjct: 1012 YTCLCPPEYTGELCEE 1027
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 37/75 (49%)
Query: 320 CHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYE 379
C ++ C + C++ ++CLC + G LC + + C + C + C+ ++
Sbjct: 994 CEDNDCENNSTCVDGINNYTCLCPPEYTGELCEEKLDFCAQDLNPCQHDSKCILTPKGFK 1053
Query: 380 CDCPPGRTGKFCEKD 394
CDC PG G+ C+ D
Sbjct: 1054 CDCTPGYIGEHCDID 1068
>sp|Q9QXX0|JAG1_MOUSE Protein jagged-1 OS=Mus musculus GN=Jag1 PE=1 SV=1
Length = 1218
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 293 SAGNVGINLYKTRAAEGRGVGQCGTSQ--CHNHTCSHGGACMNHGATFSCLCADGWFGPL 350
+ N G + Y+ EG C ++ C + C + G+C + F C C+ GW GP
Sbjct: 311 TCSNTGPDKYQCSCPEGYSGPNCEIAEHACLSDPCHNRGSCKETSSGFECECSPGWTGPT 370
Query: 351 CASRYNLCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCEKD 394
C++ N+ D + +NCS G TC L + ++C CPP TGK C+ D
Sbjct: 371 CST--NIDDCSPNNCSHGGTCQDLVNGFKCVCPPQWTGKTCQLD 412
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 66/138 (47%), Gaps = 12/138 (8%)
Query: 265 HFSKNFSILPHDLPLHSGFSGCIFDVELSAGNVGINLYKTRAAEGRGVGQCGTSQCHNHT 324
+ ++N S LP+ P H+G + C+ + + EG Q T+ C H
Sbjct: 741 NIARNSSCLPN--PCHNGGT-CVVNGD------SFTCVCKEGWEGPICTQ-NTNDCSPHP 790
Query: 325 CSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDCPP 384
C + G C++ + C CA G+ GP C N C S+ C+FGATCV + Y+C CPP
Sbjct: 791 CYNSGTCVDGDNWYRCECAPGFAGPDCRININECQSSP--CAFGATCVDEINGYQCICPP 848
Query: 385 GRTGKFCEKDESLSDISF 402
G +G C + S I+
Sbjct: 849 GHSGAKCHEVSGRSCITM 866
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 318 SQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHS 377
+ C ++ C +GG C++ ++ C+C+DGW G C + N D +++ C +G TC L +
Sbjct: 631 NDCESNPCKNGGTCIDGVNSYKCICSDGWEGAHCENNIN--DCSQNPCHYGGTCRDLVND 688
Query: 378 YECDCPPGRTGKFCEKDESLSD 399
+ CDC G GK C +S D
Sbjct: 689 FYCDCKNGWKGKTCHSRDSQCD 710
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Query: 298 GINLYKTRAAEGRGVGQC--GTSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRY 355
G+N YK ++G C + C + C +GG C + F C C +GW G C SR
Sbjct: 647 GVNSYKCICSDGWEGAHCENNINDCSQNPCHYGGTCRDLVNDFYCDCKNGWKGKTCHSRD 706
Query: 356 NLCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFC 391
+ CD C+ G TC +++C CP G G C
Sbjct: 707 SQCDEA--TCNNGGTCYDEVDTFKCMCPGGWEGTTC 740
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Query: 317 TSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTH 376
++C C + +C N A++ C C GW G C N C C A+C L +
Sbjct: 413 ANECEAKPCVNARSCKNLIASYYCDCLPGWMGQNCDININDC---LGQCQNDASCRDLVN 469
Query: 377 SYECDCPPGRTGKFCEK--DESLSDISFSG 404
Y C CPPG G CE+ DE S+ +G
Sbjct: 470 GYRCICPPGYAGDHCERDIDECASNPCLNG 499
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 320 CHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYE 379
C + CSHGG C + F C+C W G C N C++ C +C L SY
Sbjct: 378 CSPNNCSHGGTCQDLVNGFKCVCPPQWTGKTCQLDANECEAKP--CVNARSCKNLIASYY 435
Query: 380 CDCPPGRTGKFCE 392
CDC PG G+ C+
Sbjct: 436 CDCLPGWMGQNCD 448
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 318 SQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCA-SRYNLCDSTRHNCSFGATCVPLTH 376
SQC TC++GG C + TF C+C GW G C +R + C + C G TCV
Sbjct: 707 SQCDEATCNNGGTCYDEVDTFKCMCPGGWEGTTCNIARNSSC--LPNPCHNGGTCVVNGD 764
Query: 377 SYECDCPPGRTGKFCEKD 394
S+ C C G G C ++
Sbjct: 765 SFTCVCKEGWEGPICTQN 782
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 40/95 (42%), Gaps = 4/95 (4%)
Query: 299 INLYKTRAAEGRGVGQC--GTSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYN 356
+N Y+ G C +C ++ C +GG C N F CLC G+ G LC +
Sbjct: 468 VNGYRCICPPGYAGDHCERDIDECASNPCLNGGHCQNEINRFQCLCPTGFSGNLCQLDID 527
Query: 357 LCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFC 391
C+ + C GA C Y C CP GK C
Sbjct: 528 YCEP--NPCQNGAQCYNRASDYFCKCPEDYEGKNC 560
Score = 40.0 bits (92), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 327 HGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDCPPGR 386
HG G F+C C G+ G C N C+S + C G TC+ +SY+C C G
Sbjct: 602 HGKCKSQSGGKFTCDCNKGFTGTYCHENINDCES--NPCKNGGTCIDGVNSYKCICSDGW 659
Query: 387 TGKFCEKD 394
G CE +
Sbjct: 660 EGAHCENN 667
Score = 33.5 bits (75), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Query: 338 FSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPL-THSYECDCPPGRTGKFCEKDE- 395
+ CLC W G LC N C T C TC Y+C CP G +G CE E
Sbjct: 280 WQCLCETNWGGQLCDKDLNYC-GTHQPCLNRGTCSNTGPDKYQCSCPEGYSGPNCEIAEH 338
Query: 396 -SLSD 399
LSD
Sbjct: 339 ACLSD 343
>sp|Q63722|JAG1_RAT Protein jagged-1 OS=Rattus norvegicus GN=Jag1 PE=1 SV=2
Length = 1219
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 293 SAGNVGINLYKTRAAEGRGVGQCGTSQ--CHNHTCSHGGACMNHGATFSCLCADGWFGPL 350
+ N G + Y+ EG C ++ C + C + G+C + F C C+ GW GP
Sbjct: 311 TCSNTGPDKYQCSCPEGYSGPNCEIAEHACLSDPCHNRGSCKETSSGFECECSPGWTGPT 370
Query: 351 CASRYNLCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCEKD 394
C++ N+ D + +NCS G TC L + ++C CPP TGK C+ D
Sbjct: 371 CST--NIDDCSPNNCSHGGTCQDLVNGFKCVCPPQWTGKTCQLD 412
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 66/138 (47%), Gaps = 12/138 (8%)
Query: 265 HFSKNFSILPHDLPLHSGFSGCIFDVELSAGNVGINLYKTRAAEGRGVGQCGTSQCHNHT 324
+ ++N S LP+ P H+G + C+ + + EG Q T+ C H
Sbjct: 741 NIARNSSCLPN--PCHNGGT-CVVNGD------SFTCVCKEGWEGPICTQ-NTNDCSPHP 790
Query: 325 CSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDCPP 384
C + G C++ + C CA G+ GP C N C S+ C+FGATCV + Y+C CPP
Sbjct: 791 CYNSGTCVDGDNWYRCECAPGFAGPDCRININECQSSP--CAFGATCVDEINGYQCICPP 848
Query: 385 GRTGKFCEKDESLSDISF 402
G +G C + S I+
Sbjct: 849 GHSGAKCHEVSGRSCITM 866
Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 318 SQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHS 377
+ C + C++GG C++ ++ C+C+DGW G C + N D +++ C +G TC L +
Sbjct: 631 NDCEGNPCTNGGTCIDGVNSYKCICSDGWEGAHCENNIN--DCSQNPCHYGGTCRDLVND 688
Query: 378 YECDCPPGRTGKFCEKDESLSD 399
+ CDC G GK C +S D
Sbjct: 689 FYCDCKNGWKGKTCHSRDSQCD 710
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Query: 298 GINLYKTRAAEGRGVGQC--GTSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRY 355
G+N YK ++G C + C + C +GG C + F C C +GW G C SR
Sbjct: 647 GVNSYKCICSDGWEGAHCENNINDCSQNPCHYGGTCRDLVNDFYCDCKNGWKGKTCHSRD 706
Query: 356 NLCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFC 391
+ CD C+ G TC +++C CP G G C
Sbjct: 707 SQCDEA--TCNNGGTCYDEVDTFKCMCPGGWEGTTC 740
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Query: 317 TSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTH 376
++C C + +C N A++ C C GW G C N C C A+C L +
Sbjct: 413 ANECEAKPCVNARSCKNLIASYYCDCLPGWMGQNCDININDC---LGQCQNDASCRDLVN 469
Query: 377 SYECDCPPGRTGKFCEK--DESLSDISFSG 404
Y C CPPG G CE+ DE S+ +G
Sbjct: 470 GYRCICPPGYAGDHCERDIDECASNPCLNG 499
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 320 CHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYE 379
C + CSHGG C + F C+C W G C N C++ C +C L SY
Sbjct: 378 CSPNNCSHGGTCQDLVNGFKCVCPPQWTGKTCQLDANECEAKP--CVNARSCKNLIASYY 435
Query: 380 CDCPPGRTGKFCE 392
CDC PG G+ C+
Sbjct: 436 CDCLPGWMGQNCD 448
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 318 SQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCA-SRYNLCDSTRHNCSFGATCVPLTH 376
SQC TC++GG C + TF C+C GW G C +R + C + C G TCV
Sbjct: 707 SQCDEATCNNGGTCYDEVDTFKCMCPGGWEGTTCNIARNSSC--LPNPCHNGGTCVVNGD 764
Query: 377 SYECDCPPGRTGKFCEKD 394
S+ C C G G C ++
Sbjct: 765 SFTCVCKEGWEGPICTQN 782
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 40/95 (42%), Gaps = 4/95 (4%)
Query: 299 INLYKTRAAEGRGVGQC--GTSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYN 356
+N Y+ G C +C ++ C +GG C N F CLC G+ G LC +
Sbjct: 468 VNGYRCICPPGYAGDHCERDIDECASNPCLNGGHCQNEINRFQCLCPTGFSGNLCQLDID 527
Query: 357 LCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFC 391
C+ + C GA C Y C CP GK C
Sbjct: 528 YCEP--NPCQNGAQCYNRASDYFCKCPEDYEGKNC 560
Score = 38.9 bits (89), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 327 HGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDCPPGR 386
HG G F+C C G+ G C N C+ + C+ G TC+ +SY+C C G
Sbjct: 602 HGKCKSESGGKFTCDCNKGFTGTYCHENINDCEG--NPCTNGGTCIDGVNSYKCICSDGW 659
Query: 387 TGKFCEKD 394
G CE +
Sbjct: 660 EGAHCENN 667
Score = 33.5 bits (75), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Query: 338 FSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPL-THSYECDCPPGRTGKFCEKDE- 395
+ CLC W G LC N C T C TC Y+C CP G +G CE E
Sbjct: 280 WQCLCETNWGGQLCDKDLNYC-GTHQPCLNRGTCSNTGPDKYQCSCPEGYSGPNCEIAEH 338
Query: 396 -SLSD 399
LSD
Sbjct: 339 ACLSD 343
>sp|Q19319|CADH4_CAEEL Cadherin-4 OS=Caenorhabditis elegans GN=cdh-4 PE=1 SV=3
Length = 4292
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 276 DLPLHSGFSGCIFDVELSAGNVGINLYKTRAAEGRGVGQCG-----TSQCHNHTCSHGGA 330
D L G S C + + G+ + KTR Q G +S C++ C H G
Sbjct: 3852 DGELTDGVSACFRTISVD----GMKVLKTRQGMKLFGAQPGCSALTSSPCNDLPCQHAGT 3907
Query: 331 CMNHGAT-FSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDCPPGRTGK 389
C++ G + F C C + G +C C S+ C G C+P + Y C CP G TGK
Sbjct: 3908 CISQGKSHFKCECPSRYSGNVCEIDLEPCASSP--CPTGIQCIPFYNDYLCKCPNGFTGK 3965
Query: 390 FCE 392
CE
Sbjct: 3966 HCE 3968
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Query: 334 HGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTH--SYECDCPPGRTGKFC 391
H + CLC DG+ G C N C + C C+P H +YEC CP G G C
Sbjct: 3650 HSRSAQCLCPDGFGGKRCEVETNQC--AKSPCEQWQLCIPSVHNSTYECVCPLGMEGDKC 3707
>sp|P13611|CSPG2_HUMAN Versican core protein OS=Homo sapiens GN=VCAN PE=1 SV=3
Length = 3396
Score = 62.8 bits (151), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 297 VGINLYKTRAAEGRGVGQCGTSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYN 356
+GIN + EG + G +C + C +GG C ++ C C G+ G C ++
Sbjct: 3073 IGIN---EESVEGTAIYLPGPDRCKMNPCLNGGTCYPTETSYVCTCVPGYSGDQCELDFD 3129
Query: 357 LCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCEKDESLSD 399
C S + C GATCV +++ C C P G CE+D D
Sbjct: 3130 ECHS--NPCRNGATCVDGFNTFRCLCLPSYVGALCEQDTETCD 3170
Score = 43.1 bits (100), Expect = 0.004, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 319 QCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATC 371
+CH++ C +G C++ TF CLC + G LC CD H F C
Sbjct: 3130 ECHSNPCRNGATCVDGFNTFRCLCLPSYVGALCEQDTETCDYGWHK--FQGQC 3180
>sp|P81282|CSPG2_BOVIN Versican core protein OS=Bos taurus GN=VCAN PE=1 SV=2
Length = 3381
Score = 62.8 bits (151), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 297 VGINLYKTRAAEGRGVGQCGTSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYN 356
+GIN + EG V G +C + C +GG C ++ C C G+ G C ++
Sbjct: 3058 IGIN---EESVEGTAVYLPGPDRCKMNPCLNGGTCYPTETSYVCTCVPGYSGDRCELDFD 3114
Query: 357 LCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCEKDESLSD 399
C S + C GATC+ +++ C C P G CE+D D
Sbjct: 3115 ECHS--NPCRNGATCIDGFNTFRCLCLPSYVGALCEQDTETCD 3155
Score = 43.5 bits (101), Expect = 0.004, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 319 QCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATC 371
+CH++ C +G C++ TF CLC + G LC CD H F C
Sbjct: 3115 ECHSNPCRNGATCIDGFNTFRCLCLPSYVGALCEQDTETCDYGWHK--FQGQC 3165
>sp|P78504|JAG1_HUMAN Protein jagged-1 OS=Homo sapiens GN=JAG1 PE=1 SV=3
Length = 1218
Score = 62.8 bits (151), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 293 SAGNVGINLYKTRAAEGRGVGQCGTSQ--CHNHTCSHGGACMNHGATFSCLCADGWFGPL 350
+ N G + Y+ EG C ++ C + C + G+C F C C+ GW GP
Sbjct: 311 TCSNTGPDKYQCSCPEGYSGPNCEIAEHACLSDPCHNRGSCKETSLGFECECSPGWTGPT 370
Query: 351 CASRYNLCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCEKD 394
C++ N+ D + +NCS G TC L + ++C CPP TGK C+ D
Sbjct: 371 CST--NIDDCSPNNCSHGGTCQDLVNGFKCVCPPQWTGKTCQLD 412
Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 63/129 (48%), Gaps = 12/129 (9%)
Query: 265 HFSKNFSILPHDLPLHSGFSGCIFDVELSAGNVGINLYKTRAAEGRGVGQCGTSQCHNHT 324
+ ++N S LP+ P H+G + C+ + E EG Q T+ C H
Sbjct: 741 NIARNSSCLPN--PCHNGGT-CVVNGE------SFTCVCKEGWEGPICAQ-NTNDCSPHP 790
Query: 325 CSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDCPP 384
C + G C++ + C CA G+ GP C N C S+ C+FGATCV + Y C CPP
Sbjct: 791 CYNSGTCVDGDNWYRCECAPGFAGPDCRININECQSSP--CAFGATCVDEINGYRCVCPP 848
Query: 385 GRTGKFCEK 393
G +G C++
Sbjct: 849 GHSGAKCQE 857
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 318 SQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHS 377
+ C ++ C +GG C++ ++ C+C+DGW G C + N D +++ C G TC L +
Sbjct: 631 NDCESNPCRNGGTCIDGVNSYKCICSDGWEGAYCETNIN--DCSQNPCHNGGTCRDLVND 688
Query: 378 YECDCPPGRTGKFCEKDESLSD 399
+ CDC G GK C +S D
Sbjct: 689 FYCDCKNGWKGKTCHSRDSQCD 710
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 298 GINLYKTRAAEGRGVGQCGTS--QCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRY 355
G+N YK ++G C T+ C + C +GG C + F C C +GW G C SR
Sbjct: 647 GVNSYKCICSDGWEGAYCETNINDCSQNPCHNGGTCRDLVNDFYCDCKNGWKGKTCHSRD 706
Query: 356 NLCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFC 391
+ CD C+ G TC +++C CP G G C
Sbjct: 707 SQCDEA--TCNNGGTCYDEGDAFKCMCPGGWEGTTC 740
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 69/197 (35%), Gaps = 21/197 (10%)
Query: 318 SQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCA-SRYNLCDSTRHNCSFGATCVPLTH 376
SQC TC++GG C + G F C+C GW G C +R + C + C G TCV
Sbjct: 707 SQCDEATCNNGGTCYDEGDAFKCMCPGGWEGTTCNIARNSSC--LPNPCHNGGTCVVNGE 764
Query: 377 SYECDCPPGRTGKFCEKDESL--------SDISFSGRRSY-----ISLPSSELHLIINES 423
S+ C C G G C ++ + S G Y + + INE
Sbjct: 765 SFTCVCKEGWEGPICAQNTNDCSPHPCYNSGTCVDGDNWYRCECAPGFAGPDCRININEC 824
Query: 424 LSDISFSGRRSYISLPSSEL-----HLHEACIDLEIRPTKDKGLLMYFGHPQKNSMMTLS 478
S G + H C ++ RP G ++ G + T
Sbjct: 825 QSSPCAFGATCVDEINGYRCVCPPGHSGAKCQEVSGRPCITMGSVIPDGAKWDDDCNTCQ 884
Query: 479 LQGGVLELRVLMLGDRP 495
G + + G RP
Sbjct: 885 CLNGRIACSKVWCGPRP 901
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Query: 317 TSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTH 376
++C C + +C N A++ C C GW G C N C C A+C L +
Sbjct: 413 ANECEAKPCVNAKSCKNLIASYYCDCLPGWMGQNCDININDC---LGQCQNDASCRDLVN 469
Query: 377 SYECDCPPGRTGKFCEK--DESLSDISFSG 404
Y C CPPG G CE+ DE S+ +G
Sbjct: 470 GYRCICPPGYAGDHCERDIDECASNPCLNG 499
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 320 CHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYE 379
C + CSHGG C + F C+C W G C N C++ C +C L SY
Sbjct: 378 CSPNNCSHGGTCQDLVNGFKCVCPPQWTGKTCQLDANECEAKP--CVNAKSCKNLIASYY 435
Query: 380 CDCPPGRTGKFCE 392
CDC PG G+ C+
Sbjct: 436 CDCLPGWMGQNCD 448
Score = 42.0 bits (97), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 40/95 (42%), Gaps = 4/95 (4%)
Query: 299 INLYKTRAAEGRGVGQC--GTSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYN 356
+N Y+ G C +C ++ C +GG C N F CLC G+ G LC +
Sbjct: 468 VNGYRCICPPGYAGDHCERDIDECASNPCLNGGHCQNEINRFQCLCPTGFSGNLCQLDID 527
Query: 357 LCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFC 391
C+ + C GA C Y C CP GK C
Sbjct: 528 YCEP--NPCQNGAQCYNRASDYFCKCPEDYEGKNC 560
Score = 41.2 bits (95), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 327 HGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDCPPGR 386
HG G F+C C G+ G C N C+S + C G TC+ +SY+C C G
Sbjct: 602 HGKCKSQSGGKFTCDCNKGFTGTYCHENINDCES--NPCRNGGTCIDGVNSYKCICSDGW 659
Query: 387 TGKFCEKD 394
G +CE +
Sbjct: 660 EGAYCETN 667
Score = 36.6 bits (83), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Query: 338 FSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPL-THSYECDCPPGRTGKFCEKDE- 395
+ CLC W G LC N C T C G TC Y+C CP G +G CE E
Sbjct: 280 WQCLCETNWGGQLCDKDLNYC-GTHQPCLNGGTCSNTGPDKYQCSCPEGYSGPNCEIAEH 338
Query: 396 -SLSD 399
LSD
Sbjct: 339 ACLSD 343
>sp|Q62059|CSPG2_MOUSE Versican core protein OS=Mus musculus GN=Vcan PE=1 SV=2
Length = 3357
Score = 62.8 bits (151), Expect = 7e-09, Method: Composition-based stats.
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 2/94 (2%)
Query: 306 AAEGRGVGQCGTSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNC 365
+ EG V G C + C +GG C ++ C CA G+ G C ++ C S + C
Sbjct: 3041 SVEGTAVYLPGPDLCKTNPCLNGGTCYPTETSYVCTCAPGYSGDQCELDFDECHS--NPC 3098
Query: 366 SFGATCVPLTHSYECDCPPGRTGKFCEKDESLSD 399
GATCV +++ C C P G CE+D D
Sbjct: 3099 RNGATCVDGFNTFRCLCLPSYVGALCEQDTETCD 3132
Score = 43.9 bits (102), Expect = 0.003, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Query: 302 YKTRAAEGRGVGQCGTS--QCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCD 359
Y A G QC +CH++ C +G C++ TF CLC + G LC CD
Sbjct: 3073 YVCTCAPGYSGDQCELDFDECHSNPCRNGATCVDGFNTFRCLCLPSYVGALCEQDTETCD 3132
Query: 360 STRHNCSFGATC 371
H F C
Sbjct: 3133 YGWHK--FQGQC 3142
>sp|Q9ERB4|CSPG2_RAT Versican core protein (Fragments) OS=Rattus norvegicus GN=Vcan PE=2
SV=2
Length = 2738
Score = 62.4 bits (150), Expect = 8e-09, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 308 EGRGVGQCGTSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSF 367
EG V G C + C +GG C ++ C CA G+ G C ++ C S + C
Sbjct: 2423 EGTAVYLPGPDLCKTNPCLNGGTCYPTETSYVCTCAPGYSGDQCELDFDECHS--NPCRN 2480
Query: 368 GATCVPLTHSYECDCPPGRTGKFCEKDESLSD 399
GATCV +++ C C P G CE+D D
Sbjct: 2481 GATCVDGLNTFRCLCLPSYVGALCEQDTETCD 2512
Score = 43.5 bits (101), Expect = 0.004, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Query: 302 YKTRAAEGRGVGQCGTS--QCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCD 359
Y A G QC +CH++ C +G C++ TF CLC + G LC CD
Sbjct: 2453 YVCTCAPGYSGDQCELDFDECHSNPCRNGATCVDGLNTFRCLCLPSYVGALCEQDTETCD 2512
Query: 360 STRHNCSFGATC 371
H F C
Sbjct: 2513 YGWHK--FQGQC 2522
>sp|O60494|CUBN_HUMAN Cubilin OS=Homo sapiens GN=CUBN PE=1 SV=5
Length = 3623
Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 320 CHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCD---STRHNCSFGATCVPLTH 376
C ++ C +GG C+N +F C+C W GPLC++ N C+ T +C G TCV
Sbjct: 136 CSSNPCQNGGTCLNLHDSFFCICPPQWKGPLCSADVNECEIYSGTPLSCQNGGTCVNTMG 195
Query: 377 SYECDCPPGRTGKFC 391
SY C CPP G C
Sbjct: 196 SYSCHCPPETYGPQC 210
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 48/114 (42%), Gaps = 5/114 (4%)
Query: 309 GRGVGQCGTSQCHNHTCSH---GGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNC 365
G G G G Q N SH G C++ + + C C GW G C N C S + C
Sbjct: 384 GNGYGPNGCVQLSNICLSHPCLNGQCIDTVSGYFCKCDSGWTGVNCTENINECLS--NPC 441
Query: 366 SFGATCVPLTHSYECDCPPGRTGKFCEKDESLSDISFSGRRSYISLPSSELHLI 419
G TCV S+ C+C TG C+ + + S SG S S ++ +
Sbjct: 442 LNGGTCVDGVDSFSCECTRLWTGALCQVPQQVCGESLSGINGSFSYRSPDVGYV 495
Score = 40.0 bits (92), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 324 TCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCD 359
+C +GG C+N ++SC C +GP CAS+Y+ C+
Sbjct: 183 SCQNGGTCVNTMGSYSCHCPPETYGPQCASKYDDCE 218
>sp|P14585|LIN12_CAEEL Protein lin-12 OS=Caenorhabditis elegans GN=lin-12 PE=1 SV=1
Length = 1429
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 320 CHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYE 379
C ++ CSHG C++ F C+C DG+ G C + C + C G+ C+ +SY
Sbjct: 254 CASNPCSHG-VCISFSGGFQCICDDGYSGSYCQEGKDNC--VNNKCEAGSKCINGVNSYF 310
Query: 380 CDCPPGRTGKFCEKDESLSDISFSGRRSYISLPSSE 415
CDCPP RTG +CEK + + + I P SE
Sbjct: 311 CDCPPERTGPYCEKMDCSAIPDICNHGTCIDSPLSE 346
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 46/106 (43%), Gaps = 1/106 (0%)
Query: 298 GINLYKTRAAEGRGVGQCGTSQ-CHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYN 356
G +L K G G C T C+ C +GG C+ G C C DG+ G C N
Sbjct: 95 GNSLLKPSCPSGYGGDDCKTQGWCYPSVCMNGGQCIGAGNRAKCACPDGFKGERCELDVN 154
Query: 357 LCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCEKDESLSDISF 402
C+ ++ C +TC+ +Y C CP G C K + S + F
Sbjct: 155 ECEENKNACGNRSTCMNTLGTYICVCPQGFLPPDCLKPGNTSTVEF 200
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 320 CHNHTCSHGGACMNHGA--TFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHS 377
C + C + C++ A ++C+C G+ G +C +LC + CS G C S
Sbjct: 507 CLSDPCMNNATCIDVDAHIGYACICKQGFEGDICERHKDLC--LENPCSNGGVCHQHRES 564
Query: 378 YECDCPPGRTGKFCEKDE 395
+ CDCPPG G CE+++
Sbjct: 565 FSCDCPPGFYGNGCEQEK 582
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Query: 316 GTSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCV--P 373
G C N+ C G C+N ++ C C GP C C + C+ G TC+ P
Sbjct: 287 GKDNCVNNKCEAGSKCINGVNSYFCDCPPERTGPYCEKMD--CSAIPDICNHG-TCIDSP 343
Query: 374 LTH-SYECDCPPGRTGKFCEKD--ESLSDISFSGRRSYISLPSS 414
L+ ++EC C PG G CE+D E LS+ + ++LP S
Sbjct: 344 LSEKAFECQCEPGYEGILCEQDKNECLSENMCLNNGTCVNLPGS 387
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 325 CSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLT-HSYECDCP 383
C + G C+N +F C CA G+ G C N+C +C TC+ + HS C C
Sbjct: 375 CLNNGTCVNLPGSFRCDCARGFGGKWCDEPLNMCQD--FHCENDGTCMHTSDHSPVCQCK 432
Query: 384 PGRTGKFCEKDESLSDISFSGRRSYISL 411
G GK CEK+ I F G R + L
Sbjct: 433 NGFIGKRCEKE---CPIGFGGVRCDLRL 457
Score = 40.0 bits (92), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 320 CHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCV-PLTHSY 378
C + CS+GG C H +FSC C G++G C + + + C G C+
Sbjct: 547 CLENPCSNGGVCHQHRESFSCDCPPGFYGNGC-EQEKMFRCLKSTCQNGGVCINEEEKGR 605
Query: 379 ECDCPPGRTGKFCEKDESLS 398
+C+C G +G CE+ +L+
Sbjct: 606 KCECSYGFSGARCEEKINLT 625
>sp|P33450|FAT_DROME Cadherin-related tumor suppressor OS=Drosophila melanogaster GN=ft
PE=1 SV=3
Length = 5147
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 6/77 (7%)
Query: 320 CHNHTCSHGGACMN--HGATFSCLCADGWFGPLCASRYNLCDSTRHN-CSFGATCVPLTH 376
C++ C +GG+C G+++ CLC G+ G C S + DS R N C G CV L
Sbjct: 4056 CYSKPCRNGGSCQRSPDGSSYFCLCRPGFRGNQCES---VSDSCRPNPCLHGGLCVSLKP 4112
Query: 377 SYECDCPPGRTGKFCEK 393
Y+C+C PGR G+ CE+
Sbjct: 4113 GYKCNCTPGRYGRHCER 4129
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 338 FSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCEKDESL 397
+SC C G+ G C+ R + C + C C L ++C CP R GK CEK+
Sbjct: 3997 YSCQCTSGFSGEQCSRRQDPC--LPNPCHSQVQCRRLGSDFQCMCPANRDGKHCEKER-- 4052
Query: 398 SDISFS 403
SD+ +S
Sbjct: 4053 SDVCYS 4058
>sp|Q90953|CSPG2_CHICK Versican core protein OS=Gallus gallus GN=VCAN PE=2 SV=1
Length = 3562
Score = 61.6 bits (148), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 2/94 (2%)
Query: 306 AAEGRGVGQCGTSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNC 365
+ EG V G C ++ C +GG C G+ + C C G+ G C + C S + C
Sbjct: 3244 SVEGTAVQIPGQDPCKSNPCLNGGTCYPRGSFYICTCLPGFNGEQCELDIDECQS--NPC 3301
Query: 366 SFGATCVPLTHSYECDCPPGRTGKFCEKDESLSD 399
GATC+ +++ C C P G CE+D D
Sbjct: 3302 RNGATCIDGLNTFTCLCLPSYIGALCEQDTETCD 3335
Score = 41.6 bits (96), Expect = 0.015, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 319 QCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATC 371
+C ++ C +G C++ TF+CLC + G LC CD H F C
Sbjct: 3295 ECQSNPCRNGATCIDGLNTFTCLCLPSYIGALCEQDTETCDYGWHK--FQGQC 3345
>sp|Q90Y54|JAG1B_DANRE Protein jagged-1b OS=Danio rerio GN=jag1b PE=2 SV=1
Length = 1213
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 265 HFSKNFSILPHDLPLHSGFSGCIFDVELSAGNVGINLYKTRAAEGRGVGQCGTSQCHNHT 324
+ +KN S LP+ P +G + C+ + + N EG + T+ C+ H
Sbjct: 738 NIAKNSSCLPN--PCENGGT-CVVNGD------SFNCVCKEGWEGSTCTE-NTNDCNPHP 787
Query: 325 CSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDCPP 384
C + G C++ + C CA G+ GP C N C S+ C+FG+TCV + Y C CPP
Sbjct: 788 CYNSGTCVDGENWYRCECAPGFAGPDCRININECQSSP--CAFGSTCVDEINGYRCLCPP 845
Query: 385 GRTGKFCEK 393
GR G C++
Sbjct: 846 GRIGPDCQE 854
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 293 SAGNVGINLYKTRAAEGRGVGQCGTSQ--CHNHTCSHGGACMNHGATFSCLCADGWFGPL 350
+ N G + Y+ +G C ++ C ++ C++GG C + C CA GW G
Sbjct: 308 TCSNTGPDKYQCSCEDGYSGVNCERAEHACLSNPCANGGTCKETSQGYECHCAIGWSGTS 367
Query: 351 CASRYNLCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCEKD 394
C N+ D T + C G TC L + ++C CPP TGK C+ D
Sbjct: 368 C--EINVDDCTPNQCKHGGTCQDLVNGFKCACPPHWTGKTCQID 409
Score = 55.8 bits (133), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 5/95 (5%)
Query: 300 NLYKTRAAEGRGVGQCG---TSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYN 356
+ +K R + G C S C + C +GG C+ +G +F+C+C +GW G C N
Sbjct: 722 DTFKCRCSPGWEGATCNIAKNSSCLPNPCENGGTCVVNGDSFNCVCKEGWEGSTCTENTN 781
Query: 357 LCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFC 391
C+ H C TCV + Y C+C PG G C
Sbjct: 782 DCNP--HPCYNSGTCVDGENWYRCECAPGFAGPDC 814
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 317 TSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTH 376
++C + C + +C N + C C GW G C N C + C G TC L +
Sbjct: 410 ANECEDKPCVNAKSCHNLIGAYFCECLPGWSGQNCDININDC---KGQCLNGGTCKDLVN 466
Query: 377 SYECDCPPGRTGKFCEK--DESLSDISFSGRR 406
Y C CPPG TG+ CEK DE S +G R
Sbjct: 467 GYRCLCPPGYTGEQCEKDVDECASSPCLNGGR 498
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 318 SQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHS 377
SQC TC++GG C + G TF C C+ GW G C N + C G TCV S
Sbjct: 704 SQCDEATCNNGGTCHDEGDTFKCRCSPGWEGATCNIAKNS-SCLPNPCENGGTCVVNGDS 762
Query: 378 YECDCPPGRTGKFCEKD 394
+ C C G G C ++
Sbjct: 763 FNCVCKEGWEGSTCTEN 779
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 318 SQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHS 377
+ C ++ C +GG C++ + C+CADGW G C N+ D + + C C L +
Sbjct: 628 NDCESNPCRNGGTCIDKVNVYQCICADGWEGVHC--EINIDDCSLNPCLNKGACQDLVND 685
Query: 378 YECDCPPGRTGKFCEKDESLSD 399
+ C+C G GK C +S D
Sbjct: 686 FYCECRNGWKGKTCHSRDSQCD 707
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Query: 299 INLYKTRAAEGRGVGQC--GTSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYN 356
+N+Y+ A+G C C + C + GAC + F C C +GW G C SR +
Sbjct: 645 VNVYQCICADGWEGVHCEINIDDCSLNPCLNKGACQDLVNDFYCECRNGWKGKTCHSRDS 704
Query: 357 LCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFC 391
CD C+ G TC +++C C PG G C
Sbjct: 705 QCDEA--TCNNGGTCHDEGDTFKCRCSPGWEGATC 737
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 40/95 (42%), Gaps = 4/95 (4%)
Query: 299 INLYKTRAAEGRGVGQC--GTSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYN 356
+N Y+ G QC +C + C +GG C + F CLC G+ G LC +
Sbjct: 465 VNGYRCLCPPGYTGEQCEKDVDECASSPCLNGGRCQDEVNGFQCLCPAGFSGQLCQLDID 524
Query: 357 LCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFC 391
C + C GA C L Y C CP GK C
Sbjct: 525 YCKP--NPCQNGAQCFNLASDYFCKCPDDYEGKNC 557
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 327 HGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDCPPGR 386
HG G F+C C +G+ G C N C+S + C G TC+ + Y+C C G
Sbjct: 599 HGRCRSQAGGQFTCECQEGFRGTYCHENINDCES--NPCRNGGTCIDKVNVYQCICADGW 656
Query: 387 TGKFCE 392
G CE
Sbjct: 657 EGVHCE 662
Score = 38.1 bits (87), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 325 CSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDCPP 384
C +GG C + + CLC G+ G C + C S+ C G C + ++C CP
Sbjct: 455 CLNGGTCKDLVNGYRCLCPPGYTGEQCEKDVDECASSP--CLNGGRCQDEVNGFQCLCPA 512
Query: 385 GRTGKFCEKD 394
G +G+ C+ D
Sbjct: 513 GFSGQLCQLD 522
Score = 35.8 bits (81), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 35/86 (40%), Gaps = 4/86 (4%)
Query: 338 FSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPL-THSYECDCPPGRTGKFCEKDE- 395
+ CLC W G LC N C T C G TC Y+C C G +G CE+ E
Sbjct: 277 WQCLCDTNWGGQLCDKDLNYC-GTHQPCLNGGTCSNTGPDKYQCSCEDGYSGVNCERAEH 335
Query: 396 -SLSDISFSGRRSYISLPSSELHLII 420
LS+ +G + E H I
Sbjct: 336 ACLSNPCANGGTCKETSQGYECHCAI 361
>sp|Q90Y57|JAG1A_DANRE Protein jagged-1a OS=Danio rerio GN=jag1a PE=2 SV=1
Length = 1242
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 12/129 (9%)
Query: 265 HFSKNFSILPHDLPLHSGFSGCIFDVELSAGNVGINLYKTRAAEGRGVGQCGTSQCHNHT 324
+ +KN S LP+ P +G + C+ + G EG Q ++ C+
Sbjct: 744 NIAKNSSCLPN--PCENGAT-CVVTGD------GFTCVCKEGWEGPTCSQ-NSNDCNPQP 793
Query: 325 CSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDCPP 384
C + G C++ + C CA G+ GP C N C S+ C+FG+TCV + Y C CPP
Sbjct: 794 CYNSGTCVDGDNWYRCECASGFAGPDCRININECQSSP--CAFGSTCVDEINGYRCLCPP 851
Query: 385 GRTGKFCEK 393
GRTG C++
Sbjct: 852 GRTGPRCQE 860
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 56/135 (41%), Gaps = 6/135 (4%)
Query: 261 YLGGHFSKNFSILPHDLPLHSGFSGCIFDVELSAGNV--GINLYKTRAAEGRGVGQCGTS 318
+ GGHFS + H + C LS G IN Y+ A+G C T+
Sbjct: 611 HAGGHFSCDCQDGFTGTYCHENINDCESSPCLSGGTCIDKINAYQCICADGWEGPNCETN 670
Query: 319 --QCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTH 376
C + C G C + F C C +GW G C SR + CD C+ G TC
Sbjct: 671 IDDCRTNPCRDRGVCRDLVNDFYCECENGWKGKTCHSRESQCD--EDTCNNGGTCSDEGD 728
Query: 377 SYECDCPPGRTGKFC 391
S++C C PG G C
Sbjct: 729 SFKCLCSPGWEGATC 743
Score = 52.4 bits (124), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 318 SQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHS 377
SQC TC++GG C + G +F CLC+ GW G C N + C GATCV
Sbjct: 710 SQCDEDTCNNGGTCSDEGDSFKCLCSPGWEGATCNIAKNS-SCLPNPCENGATCVVTGDG 768
Query: 378 YECDCPPGRTGKFCEKD 394
+ C C G G C ++
Sbjct: 769 FTCVCKEGWEGPTCSQN 785
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 318 SQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHS 377
+ C + C GG C++ + C+CADGW GP C + N+ D + C C L +
Sbjct: 634 NDCESSPCLSGGTCIDKINAYQCICADGWEGPNCET--NIDDCRTNPCRDRGVCRDLVND 691
Query: 378 YECDCPPGRTGKFCEKDESLSD 399
+ C+C G GK C ES D
Sbjct: 692 FYCECENGWKGKTCHSRESQCD 713
Score = 48.9 bits (115), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 48/111 (43%), Gaps = 4/111 (3%)
Query: 293 SAGNVGINLYKTRAAEGRGVGQC--GTSQCHNHTCSHGGACMNHGATFSCLCADGWFGPL 350
+ N G + Y +G C + C + C +GG C+ F C CA GW GP
Sbjct: 312 TCSNTGPDKYHCACPDGYSGQNCERADNACLSEPCLNGGLCVESSLGFECQCAAGWTGPS 371
Query: 351 CASRYNLCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCEKDESLSDIS 401
C N D + + C+ CV L ++C CP TGK C D + + S
Sbjct: 372 C--NINEDDCSPNPCNHSGVCVDLVDGFKCICPVQWTGKTCLIDANECEES 420
Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 42/97 (43%), Gaps = 4/97 (4%)
Query: 299 INLYKTRAAEGRGVGQC--GTSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYN 356
+N Y+ A G +C +C + C +GG C + F CLC G+ G C +
Sbjct: 469 VNGYRCVCAAGFAGDRCERDVDECASRPCLNGGRCQDTLNGFQCLCPPGFSGATCQLDLD 528
Query: 357 LCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCEK 393
C+S C GA C L Y C CP GK C +
Sbjct: 529 YCESGP--CQNGAQCFSLASDYYCKCPEDYEGKNCSQ 563
Score = 42.0 bits (97), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 325 CSHGGACMNH---GATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECD 381
C G C +H G FSC C DG+ G C N C+S+ C G TC+ ++Y+C
Sbjct: 600 CGPHGRCRSHSHAGGHFSCDCQDGFTGTYCHENINDCESSP--CLSGGTCIDKINAYQCI 657
Query: 382 CPPGRTGKFCEKD 394
C G G CE +
Sbjct: 658 CADGWEGPNCETN 670
Score = 40.8 bits (94), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 320 CHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYE 379
C + C+H G C++ F C+C W G C N C+ + C +C L Y
Sbjct: 379 CSPNPCNHSGVCVDLVDGFKCICPVQWTGKTCLIDANECEESP--CVNAHSCRNLIGGYF 436
Query: 380 CDCPPGRTGKFCE 392
C+C PG TG+ C+
Sbjct: 437 CECLPGWTGQNCD 449
Score = 40.4 bits (93), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 39/87 (44%), Gaps = 7/87 (8%)
Query: 310 RGVGQCGTSQCHNHTCSHGGACMNHGA-TFSCLCADGWFGPLCASRYNLCDSTRHNCSFG 368
+ + CGT Q C +GG C N G + C C DG+ G C N C S C G
Sbjct: 296 KDLNTCGTLQ----PCLNGGTCSNTGPDKYHCACPDGYSGQNCERADNACLS--EPCLNG 349
Query: 369 ATCVPLTHSYECDCPPGRTGKFCEKDE 395
CV + +EC C G TG C +E
Sbjct: 350 GLCVESSLGFECQCAAGWTGPSCNINE 376
Score = 38.9 bits (89), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 318 SQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHS 377
+ CH C +GG C + + C+CA G+ G C + C S C G C +
Sbjct: 453 NDCHGQ-CLNGGLCKDLVNGYRCVCAAGFAGDRCERDVDECAS--RPCLNGGRCQDTLNG 509
Query: 378 YECDCPPGRTGKFCEKD 394
++C CPPG +G C+ D
Sbjct: 510 FQCLCPPGFSGATCQLD 526
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 38/97 (39%), Gaps = 5/97 (5%)
Query: 317 TSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTH 376
++C C + +C N + C C GW G C N C C G C L +
Sbjct: 414 ANECEESPCVNAHSCRNLIGGYFCECLPGWTGQNCDINVNDC---HGQCLNGGLCKDLVN 470
Query: 377 SYECDCPPGRTGKFCEK--DESLSDISFSGRRSYISL 411
Y C C G G CE+ DE S +G R +L
Sbjct: 471 GYRCVCAAGFAGDRCERDVDECASRPCLNGGRCQDTL 507
Score = 36.6 bits (83), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Query: 338 FSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPL-THSYECDCPPGRTGKFCEKDES 396
+ CLC W G LC N C T C G TC Y C CP G +G+ CE+ ++
Sbjct: 281 WQCLCDTNWGGQLCDKDLNTC-GTLQPCLNGGTCSNTGPDKYHCACPDGYSGQNCERADN 339
Query: 397 --LSDISFSG 404
LS+ +G
Sbjct: 340 ACLSEPCLNG 349
>sp|Q61982|NOTC3_MOUSE Neurogenic locus notch homolog protein 3 OS=Mus musculus GN=Notch3
PE=1 SV=1
Length = 2318
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 59/130 (45%), Gaps = 26/130 (20%)
Query: 281 SGFSG--CIFDVELSAGNVGINL---------YKTRAAEG-------RGVGQCGTSQCHN 322
SGFSG C DV+ A N Y+ R AEG R V C CH+
Sbjct: 498 SGFSGSMCQLDVDECASTPCRNGAKCVDQPDGYECRCAEGFEGTLCERNVDDCSPDPCHH 557
Query: 323 HTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDC 382
G C++ A+FSC CA G+ G C S+ + C S C +G C+ L Y C C
Sbjct: 558 ------GRCVDGIASFSCACAPGYTGIRCESQVDECRS--QPCRYGGKCLDLVDKYLCRC 609
Query: 383 PPGRTGKFCE 392
PPG TG CE
Sbjct: 610 PPGTTGVNCE 619
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 69/188 (36%), Gaps = 12/188 (6%)
Query: 223 TVRVGKNGQQCWLMVDNMGNVTSKSPGRLTQLNTKPMLYLGGHFSKNFSILPHDLPLHSG 282
T R G G QC VD ++ GR Q + G +S + LP
Sbjct: 988 TCREGFTGSQCQNPVDWCSQAPCQNGGRCVQTGAYCICPPG--WSGRLCDI-QSLPCTEA 1044
Query: 283 FSGCIFDVELSAGNVGINLYKTRA-----AEGRGVGQCG--TSQCHNHTCSHGGACMNHG 335
+ +E G + K R+ EGR C C C HGG C +
Sbjct: 1045 AAQMGVRLEQLCQEGGKCIDKGRSHYCVCPEGRTGSHCEHEVDPCTAQPCQHGGTCRGYM 1104
Query: 336 ATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCEKDE 395
+ C C G+ G C + C S C G +C+ L Y C CPPG G CE +E
Sbjct: 1105 GGYVCECPAGYAGDSCEDNIDECAS--QPCQNGGSCIDLVARYLCSCPPGTLGVLCEINE 1162
Query: 396 SLSDISFS 403
D+ S
Sbjct: 1163 DDCDLGPS 1170
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 320 CHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYE 379
C + C HGG+C + +FSC C DG+ GP CA + C S+ C G TC S+
Sbjct: 854 CDPNPCLHGGSCQDGVGSFSCSCLDGFAGPRCARDVDECLSS--PCGPG-TCTDHVASFT 910
Query: 380 CDCPPGRTGKFCEKDESLSDISFS 403
C CPPG G CE D L D S S
Sbjct: 911 CACPPGYGGFHCEID--LPDCSPS 932
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 319 QCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCD-----STRHNCSFGATCVP 373
+C + C +GG+C++ A + C C G G LC + CD + C TCV
Sbjct: 1126 ECASQPCQNGGSCIDLVARYLCSCPPGTLGVLCEINEDDCDLGPSLDSGVQCLHNGTCVD 1185
Query: 374 LTHSYECDCPPGRTGKFCEKD 394
L + C+CPPG TG CE D
Sbjct: 1186 LVGGFRCNCPPGYTGLHCEAD 1206
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Query: 319 QCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSY 378
+C + C +GG C + FSC C G+ G +C + C ST C GA CV Y
Sbjct: 473 ECQSSPCVNGGVCKDRVNGFSCTCPSGFSGSMCQLDVDECAST--PCRNGAKCVDQPDGY 530
Query: 379 ECDCPPGRTGKFCEK--DESLSDISFSGR 405
EC C G G CE+ D+ D GR
Sbjct: 531 ECRCAEGFEGTLCERNVDDCSPDPCHHGR 559
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 319 QCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSY 378
Q + C +GG C N SC+C +GW G C+ N+ D C GATC S+
Sbjct: 280 QLQPNACHNGGTCFNLLGGHSCVCVNGWTGESCSQ--NIDDCATAVCFHGATCHDRVASF 337
Query: 379 ECDCPPGRTGKFCEKDESL 397
C CP G+TG C D++
Sbjct: 338 YCACPMGKTGLLCHLDDAC 356
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 41/108 (37%), Gaps = 37/108 (34%)
Query: 324 TCSHGGACMNHGATFSCLCADGWFGPLCAS------------------------------ 353
TC HGG C+N +F C C G+ G LC +
Sbjct: 168 TCRHGGTCLNTPGSFRCQCPLGYTGLLCENPVVPCAPSPCRNGGTCRQSSDVTYDCACLP 227
Query: 354 -------RYNLCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCEKD 394
N+ D H C G TCV ++Y C CPP TG+FC +D
Sbjct: 228 GFEGQNCEVNVDDCPGHRCLNGGTCVDGVNTYNCQCPPEWTGQFCTED 275
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Query: 320 CHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYE 379
C H C +GG C++ T++C C W G C + C + C G TC L +
Sbjct: 241 CPGHRCLNGGTCVDGVNTYNCQCPPEWTGQFCTEDVDECQLQPNACHNGGTCFNLLGGHS 300
Query: 380 CDCPPGRTGKFCEK--DESLSDISFSG 404
C C G TG+ C + D+ + + F G
Sbjct: 301 CVCVNGWTGESCSQNIDDCATAVCFHG 327
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 323 HTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDC 382
+ C H G C+N +F C C G+ GP C + N C S C ATC+ + C C
Sbjct: 401 NPCEHLGRCVNTQGSFLCQCGRGYTGPRCETDVNECLSG--PCRNQATCLDRIGQFTCIC 458
Query: 383 PPGRTGKFCEKD 394
G TG +CE D
Sbjct: 459 MAGFTGTYCEVD 470
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 47/119 (39%), Gaps = 6/119 (5%)
Query: 278 PLHSGFSGC--IFDVELSAGNVGINLYKTRAAEGRGVGQCGTSQCHNHTCSHGGAC-MNH 334
P HSG + + AG + R +G Q C + C HG C +
Sbjct: 82 PCHSGPCAGRGVCQSSVVAGTARFSCRCLRGFQGPDCSQ--PDPCVSRPCVHGAPCSVGP 139
Query: 335 GATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCEK 393
F+C C G+ G C S + C S C G TC+ S+ C CP G TG CE
Sbjct: 140 DGRFACACPPGYQGQSCQSDIDECRSGT-TCRHGGTCLNTPGSFRCQCPLGYTGLLCEN 197
Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 55/128 (42%), Gaps = 17/128 (13%)
Query: 282 GFSGCIFDVELSAGNVGIN----LYKTRAAEGRGVGQCG-----------TSQCHNHTCS 326
GF+G D ++ ++G N L + +G + QCG ++C + C
Sbjct: 383 GFTGGACDQDVDECSIGANPCEHLGRCVNTQGSFLCQCGRGYTGPRCETDVNECLSGPCR 442
Query: 327 HGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDCPPGR 386
+ C++ F+C+C G+ G C + C S+ C G C + + C CP G
Sbjct: 443 NQATCLDRIGQFTCICMAGFTGTYCEVDIDECQSS--PCVNGGVCKDRVNGFSCTCPSGF 500
Query: 387 TGKFCEKD 394
+G C+ D
Sbjct: 501 SGSMCQLD 508
Score = 41.2 bits (95), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 318 SQCHNHTCSHGGACMNHGATFS-CLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTH 376
S C C HGG C + + C C GW GP C + C + C TC L
Sbjct: 774 SPCTPSLCEHGGHCESDPDRLTVCSCPPGWQGPRCQQDVDEC-AGASPCGPHGTCTNLPG 832
Query: 377 SYECDCPPGRTGKFCEKD 394
++ C C G TG FC++D
Sbjct: 833 NFRCICHRGYTGPFCDQD 850
Score = 40.8 bits (94), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 320 CHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYE 379
C +C +GG C++ ++FSCLC G+ G C + C S C G C P +E
Sbjct: 929 CSPSSCFNGGTCVDGVSSFSCLCRPGYTGTHCQYEADPCFS--RPCLHGGICNPTHPGFE 986
Query: 380 CDCPPGRTGKFCEK 393
C C G TG C+
Sbjct: 987 CTCREGFTGSQCQN 1000
Score = 40.8 bits (94), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 320 CHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYE 379
C + C HGG C F C C +G+ G C + + C ++ C G CV T +Y
Sbjct: 967 CFSRPCLHGGICNPTHPGFECTCREGFTGSQCQNPVDWC--SQAPCQNGGRCV-QTGAY- 1022
Query: 380 CDCPPGRTGKFCE 392
C CPPG +G+ C+
Sbjct: 1023 CICPPGWSGRLCD 1035
Score = 39.3 bits (90), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 320 CHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYE 379
C ++ C+ G C + + C+C G+ GPLC N C S+ C G +CV + +
Sbjct: 625 CASNPCTFG-VCRDGINRYDCVCQPGFTGPLCNVEINECASS--PCGEGGSCVDGENGFH 681
Query: 380 CDCPPGRTGKFC 391
C CPPG C
Sbjct: 682 CLCPPGSLPPLC 693
Score = 38.5 bits (88), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 37/91 (40%), Gaps = 9/91 (9%)
Query: 316 GTSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLT 375
G S C H G C N F C+C G+ GP C + CD + C G +C
Sbjct: 817 GASPCGPH-----GTCTNLPGNFRCICHRGYTGPFCDQDIDDCDP--NPCLHGGSCQDGV 869
Query: 376 HSYECDCPPGRTGKFCEK--DESLSDISFSG 404
S+ C C G G C + DE LS G
Sbjct: 870 GSFSCSCLDGFAGPRCARDVDECLSSPCGPG 900
Score = 37.7 bits (86), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Query: 320 CHNHTCSHGGACMNH----GATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATC-VPL 374
CH+ C+ G C + A FSC C G+ GP C S+ + C S C GA C V
Sbjct: 83 CHSGPCAGRGVCQSSVVAGTARFSCRCLRGFQGPDC-SQPDPCVS--RPCVHGAPCSVGP 139
Query: 375 THSYECDCPPGRTGKFCEKD 394
+ C CPPG G+ C+ D
Sbjct: 140 DGRFACACPPGYQGQSCQSD 159
Score = 37.4 bits (85), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 319 QCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSY 378
+C + C +GG C++ + C C G G C N+ D + C+FG C + Y
Sbjct: 586 ECRSQPCRYGGKCLDLVDKYLCRCPPGTTGVNC--EVNIDDCASNPCTFG-VCRDGINRY 642
Query: 379 ECDCPPGRTGKFC 391
+C C PG TG C
Sbjct: 643 DCVCQPGFTGPLC 655
Score = 37.0 bits (84), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 40/98 (40%), Gaps = 5/98 (5%)
Query: 298 GINLYKTRAAEGRGVGQCGT--SQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRY 355
GIN Y G C ++C + C GG+C++ F CLC G PLC
Sbjct: 638 GINRYDCVCQPGFTGPLCNVEINECASSPCGEGGSCVDGENGFHCLCPPGSLPPLCLPAN 697
Query: 356 NLCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCEK 393
+ C CS G C + C C PG +G C +
Sbjct: 698 HPC--AHKPCSHG-VCHDAPGGFRCVCEPGWSGPRCSQ 732
Score = 37.0 bits (84), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 32/79 (40%), Gaps = 7/79 (8%)
Query: 318 SQCHNHTCSHGGACMNH-----GATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCV 372
S C + C HGG C + G TF+C C ++G C C + C G C
Sbjct: 1249 SPCESQPCQHGGQCRHSLGRGGGLTFTCHCVPPFWGLRCERVARSCRELQ--CPVGIPCQ 1306
Query: 373 PLTHSYECDCPPGRTGKFC 391
C CPPG +G C
Sbjct: 1307 QTARGPRCACPPGLSGPSC 1325
Score = 36.2 bits (82), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
Query: 320 CHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYE 379
C + C GG C + G F C CA G+ G C L T C G C
Sbjct: 739 CESQPCQAGGTCTSDGIGFRCTCAPGFQGHQCEV---LSPCTPSLCEHGGHCESDPDRLT 795
Query: 380 -CDCPPGRTGKFCEKD 394
C CPPG G C++D
Sbjct: 796 VCSCPPGWQGPRCQQD 811
Score = 32.7 bits (73), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 318 SQCHNHTCSHGGACMNHGAT--FSCLCADGWFGPLCAS 353
+ C + C HGG+C+ + F C+CA GW GP C +
Sbjct: 1338 ASCASAPCLHGGSCLPVQSVPFFRCVCAPGWGGPRCET 1375
>sp|Q4LDE5|SVEP1_HUMAN Sushi, von Willebrand factor type A, EGF and pentraxin
domain-containing protein 1 OS=Homo sapiens GN=SVEP1 PE=1
SV=3
Length = 3571
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 314 QCGTS--QCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATC 371
+CG + +C + C +G C + +F CLCA G+ G C N C S + C ATC
Sbjct: 1341 RCGKNVDECLSQPCKNGATCKDGANSFRCLCAAGFTGSHCELNINECQS--NPCRNQATC 1398
Query: 372 VPLTHSYECDCPPGRTGKFCEKDESLS---DISFSGRRSYISL 411
V +SY C C PG +GK CE ++S D SG Y+ L
Sbjct: 1399 VDELNSYSCKCQPGFSGKRCETEQSTGFNLDFEVSGIYGYVML 1441
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Query: 318 SQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHS 377
++C + C + G C++ A + C C G+ G C + N C S + C A C
Sbjct: 1271 NECSSSPCLNKGICVDGVAGYRCTCVKGFVGLHCETEVNECQS--NPCLNNAVCEDQVGG 1328
Query: 378 YECDCPPGRTGKFCEK--DESLSDISFSG 404
+ C CPPG G C K DE LS +G
Sbjct: 1329 FLCKCPPGFLGTRCGKNVDECLSQPCKNG 1357
Score = 41.6 bits (96), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 30/67 (44%), Gaps = 11/67 (16%)
Query: 325 CSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDCPP 384
C +GG C A C C +GW G LC + C G CV Y+CDCPP
Sbjct: 3476 CQNGGICQRPNA---CSCPEGWMGRLCEEPICILP-----CLNGGRCV---APYQCDCPP 3524
Query: 385 GRTGKFC 391
G TG C
Sbjct: 3525 GWTGSRC 3531
Score = 40.8 bits (94), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 319 QCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSY 378
+C + C + G C G + CLC G+ G C + + C C C L +
Sbjct: 1196 ECFFNPCHNSGTCQQLGRGYVCLCPLGYTGLKCETDIDECSPLP--CLNNGVCKDLVGEF 1253
Query: 379 ECDCPPGRTGKFCEKD 394
C+CP G TG+ CE++
Sbjct: 1254 ICECPSGYTGQRCEEN 1269
Score = 35.4 bits (80), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 29/76 (38%), Gaps = 2/76 (2%)
Query: 319 QCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSY 378
+C C + G C + F C C G+ G C N C S+ C CV Y
Sbjct: 1234 ECSPLPCLNNGVCKDLVGEFICECPSGYTGQRCEENINECSSSP--CLNKGICVDGVAGY 1291
Query: 379 ECDCPPGRTGKFCEKD 394
C C G G CE +
Sbjct: 1292 RCTCVKGFVGLHCETE 1307
>sp|Q63HQ2|EGFLA_HUMAN Pikachurin OS=Homo sapiens GN=EGFLAM PE=1 SV=2
Length = 1017
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 81/167 (48%), Gaps = 13/167 (7%)
Query: 216 KSKRGGY-TVRVGKNGQQCWLMVDNMGNVTSKSPGRLTQLNTKPMLYLGGHFSKNFSILP 274
K K GG+ TV + ++G L ++N VT +S G+ +++ + LYLGG S + L
Sbjct: 465 KIKLGGWHTVMLYRDGLNGLLQLNNGTPVTGQSQGQYSKITFRTPLYLGGAPSAYW--LV 522
Query: 275 HDLPLHSGFSGCIFDVELSAGNVGINLYK-TRAAEGRGVGQCGTSQCHNHTCSHGGACMN 333
+ GF GC+ + ++ + + + +A G VG+C + C +C HGG C
Sbjct: 523 RATGTNRGFQGCVQSLAVNGRRIDMRPWPLGKALSGADVGECSSGICDEASCIHGGTCTA 582
Query: 334 HGA-TFSCLCADGWFGPLCASRYNLC-----DSTRHNCSFGATCVPL 374
A ++ CLC G+ G C + L +S R S+ AT PL
Sbjct: 583 IKADSYICLCPLGFKGRHCEDAFTLTIPQFRESLR---SYAATPWPL 626
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 17/102 (16%)
Query: 222 YTVRVGKNGQQCWLMVDNMGNVTSKSPGRLTQLNTKPMLYLGGHFSKNFSILPHDLPLHS 281
+ V+ ++GQ + VD+ G T KSPG + QLN LY+GG ++ LH+
Sbjct: 926 HRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGM---------KEIALHT 976
Query: 282 ------GFSGCIFDVELSAGNVGINLYKTRAAEGRGVGQCGT 317
G GCI LS + I+L + A +G+ + CG
Sbjct: 977 NRQYMRGLVGCISHFTLST-DYHISLVED-AVDGKNINTCGA 1016
Score = 38.1 bits (87), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 11/77 (14%)
Query: 361 TRHNCSFGATCVPLTHSYECDCPPGRTGKFCEKD----------ESLSDISFSGRRSYIS 410
R C+ G +C P Y+CDCP G G C+K+ E++ F G RSY++
Sbjct: 789 VRAPCAHGGSCRPRKEGYDCDCPLGFEGLHCQKECGNYCLNTIIEAIEIPQFIG-RSYLT 847
Query: 411 LPSSELHLIINESLSDI 427
+ ++ ++ S S++
Sbjct: 848 YDNPDILKRVSGSRSNV 864
Score = 36.6 bits (83), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 53/130 (40%), Gaps = 6/130 (4%)
Query: 222 YTVRVGKNGQQCWLMVDNMGNVTSKSPGRLTQLNTKPMLYLGGHFSKNFSILPHDLPLHS 281
+ +RV + + L VD V + G TQ+ +++GG N+ + + +
Sbjct: 696 HELRVSRTAKNGILQVDKQKIVEGMAEGGFTQIKCNTDIFIGG--VPNYDDVKKNSGVLK 753
Query: 282 GFSGCIFDVELSAGNVGINLYKTRAAEGRGVGQCGTSQCHNHTCSHGGACMNHGATFSCL 341
FSG I + L+ + + K G V + C C+HGG+C + C
Sbjct: 754 PFSGSIQKIILNDRTIHV---KHDFTSGVNV-ENAAHPCVRAPCAHGGSCRPRKEGYDCD 809
Query: 342 CADGWFGPLC 351
C G+ G C
Sbjct: 810 CPLGFEGLHC 819
>sp|Q9R172|NOTC3_RAT Neurogenic locus notch homolog protein 3 OS=Rattus norvegicus
GN=Notch3 PE=2 SV=2
Length = 2319
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 59/130 (45%), Gaps = 26/130 (20%)
Query: 281 SGFSG--CIFDVELSAGNVGINL---------YKTRAAEG-------RGVGQCGTSQCHN 322
SGFSG C DV+ A N Y+ R AEG R V C CH+
Sbjct: 499 SGFSGSTCQLDVDECASTPCRNGAKCVDQPDGYECRCAEGFEGTLCERNVDDCSPDPCHH 558
Query: 323 HTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDC 382
G C++ A+FSC CA G+ G C S+ + C S C +G C+ L Y C C
Sbjct: 559 ------GRCVDGIASFSCACAPGYTGIRCESQVDECRS--QPCRYGGKCLDLVDKYLCRC 610
Query: 383 PPGRTGKFCE 392
PPG TG CE
Sbjct: 611 PPGTTGVNCE 620
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 66/180 (36%), Gaps = 12/180 (6%)
Query: 223 TVRVGKNGQQCWLMVDNMGNVTSKSPGRLTQLNTKPMLYLGGHFSKNFSILPHDLPLHSG 282
T R G G QC VD ++ GR Q T +S +P LP
Sbjct: 989 TCREGFTGNQCQNPVDWCSQAPCQNGGRCVQ--TGAYCICPPEWSGPLCDIP-SLPCTEA 1045
Query: 283 FS--GCIFDVELSAGNVGINLYKTR---AAEGRGVGQCG--TSQCHNHTCSHGGACMNHG 335
+ G + AG I+ + EGR C C C HGG C +
Sbjct: 1046 AAHMGVRLEQLCQAGGQCIDKDHSHYCVCPEGRMGSHCEQEVDPCTAQPCQHGGTCRGYM 1105
Query: 336 ATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCEKDE 395
+ C C G+ G C + C S C G +C+ L Y C CPPG G CE +E
Sbjct: 1106 GGYVCECPTGYSGDSCEDDVDECAS--QPCQNGGSCIDLVAHYLCSCPPGTLGVLCEINE 1163
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
Query: 319 QCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSY 378
+C + C +GG C + FSC C G+ G C + C ST C GA CV Y
Sbjct: 474 ECQSSPCVNGGVCKDRVNGFSCTCPSGFSGSTCQLDVDECAST--PCRNGAKCVDQPDGY 531
Query: 379 ECDCPPGRTGKFCEK--DESLSDISFSGR 405
EC C G G CE+ D+ D GR
Sbjct: 532 ECRCAEGFEGTLCERNVDDCSPDPCHHGR 560
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 320 CHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYE 379
C + C +GG+C + +FSC C G+ GP CA + C S+ C G TC S+
Sbjct: 855 CDPNPCLNGGSCQDGVGSFSCSCLSGFAGPRCARDVDECLSS--PCGPG-TCTDHVASFT 911
Query: 380 CDCPPGRTGKFCEKD 394
C CPPG G CE D
Sbjct: 912 CTCPPGYGGFHCETD 926
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 319 QCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCD-----STRHNCSFGATCVP 373
+C + C +GG+C++ A + C C G G LC + C + C TCV
Sbjct: 1127 ECASQPCQNGGSCIDLVAHYLCSCPPGTLGVLCEINEDDCGPGPSLDSGLRCLHNGTCVD 1186
Query: 374 LTHSYECDCPPGRTGKFCEKD 394
L + C+CPPG TG CE D
Sbjct: 1187 LVGGFRCNCPPGYTGLHCEAD 1207
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 42/108 (38%), Gaps = 37/108 (34%)
Query: 324 TCSHGGACMNHGATFSCLCADGWFGPLCAS------------------------------ 353
+C HGG C+N +F CLC G+ G LC +
Sbjct: 169 SCRHGGTCINTPGSFHCLCPLGYTGLLCENPIVPCAPSPCRNGGTCRQSSDVTYDCACLP 228
Query: 354 -------RYNLCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCEKD 394
N+ D H C G TCV ++Y C CPP TG+FC +D
Sbjct: 229 GFEGQNCEVNVDDCPGHRCLNGGTCVDGVNTYNCQCPPEWTGQFCTED 276
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 319 QCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSY 378
Q + C +GG C N SC+C +GW G C+ N+ D C GATC S+
Sbjct: 281 QLQPNACHNGGTCFNLLGGHSCVCVNGWTGESCSQ--NIDDCATAVCFHGATCHDRVASF 338
Query: 379 ECDCPPGRTGKFCEKDESL 397
C CP G+TG C D++
Sbjct: 339 YCACPMGKTGLLCHLDDAC 357
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Query: 320 CHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYE 379
C H C +GG C++ T++C C W G C + C + C G TC L +
Sbjct: 242 CPGHRCLNGGTCVDGVNTYNCQCPPEWTGQFCTEDVDECQLQPNACHNGGTCFNLLGGHS 301
Query: 380 CDCPPGRTGKFCEK--DESLSDISFSG 404
C C G TG+ C + D+ + + F G
Sbjct: 302 CVCVNGWTGESCSQNIDDCATAVCFHG 328
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 323 HTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDC 382
+ C H G C+N +F C C G+ GP C + N C S C ATC+ + C C
Sbjct: 402 NPCEHLGRCVNTQGSFLCQCGRGYTGPRCETDVNECLSG--PCRNQATCLDRIGQFTCIC 459
Query: 383 PPGRTGKFCEKD 394
G TG FCE D
Sbjct: 460 MAGFTGTFCEVD 471
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 318 SQCHNHTCSHGGACMNHGATFS-CLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTH 376
S C C HGG C + + C C GW GP C + C + C TC L
Sbjct: 775 SPCTPSLCEHGGHCESDPDQLTVCSCPPGWQGPRCQQDVDEC-AGASPCGPHGTCTNLPG 833
Query: 377 SYECDCPPGRTGKFCEKD 394
S+ C C G TG FC++D
Sbjct: 834 SFRCICHGGYTGPFCDQD 851
Score = 41.2 bits (95), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 55/128 (42%), Gaps = 17/128 (13%)
Query: 282 GFSGCIFDVELSAGNVGIN----LYKTRAAEGRGVGQCG-----------TSQCHNHTCS 326
GF+G D ++ ++G N L + +G + QCG ++C + C
Sbjct: 384 GFTGGACDQDVDECSIGANPCEHLGRCVNTQGSFLCQCGRGYTGPRCETDVNECLSGPCR 443
Query: 327 HGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDCPPGR 386
+ C++ F+C+C G+ G C + C S+ C G C + + C CP G
Sbjct: 444 NQATCLDRIGQFTCICMAGFTGTFCEVDIDECQSS--PCVNGGVCKDRVNGFSCTCPSGF 501
Query: 387 TGKFCEKD 394
+G C+ D
Sbjct: 502 SGSTCQLD 509
Score = 40.8 bits (94), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 320 CHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYE 379
C +C +GG C++ +FSCLC G+ G C + + C S C G C P +E
Sbjct: 930 CSPSSCFNGGTCVDGVNSFSCLCRPGYTGTHCQYKVDPCFS--RPCLHGGICNPTHSGFE 987
Query: 380 CDCPPGRTGKFCEK 393
C C G TG C+
Sbjct: 988 CTCREGFTGNQCQN 1001
Score = 40.8 bits (94), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 62/157 (39%), Gaps = 12/157 (7%)
Query: 239 NMGNVTSKSPGRLTQLNTKPMLYLGGHFSKNFSILPHDLPLHSGFSGCIFDVELSAGNVG 298
N G T + P R L L G + + + P HSG V S+ G
Sbjct: 52 NGGRCTHQQPSREAAC-----LCLPGWVGERCQL---EDPCHSGPCA-GRGVCQSSVVAG 102
Query: 299 INLYKTRAAEG-RGVGQCGTSQCHNHTCSHGGAC-MNHGATFSCLCADGWFGPLCASRYN 356
+ + R G RG C + C+HG C + ++C C G+ G C S +
Sbjct: 103 VARFSCRCLRGFRGPDCSLPDPCFSSPCAHGAPCSVGSDGRYACACPPGYQGRNCRSDID 162
Query: 357 LCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCEK 393
C + +C G TC+ S+ C CP G TG CE
Sbjct: 163 ECRAGA-SCRHGGTCINTPGSFHCLCPLGYTGLLCEN 198
Score = 38.9 bits (89), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 320 CHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYE 379
C ++ C+ G C + + C+C G+ GPLC N C S+ C G +CV + +
Sbjct: 626 CASNPCTFG-VCRDGINRYDCVCQPGFTGPLCNVEINECASS--PCGEGGSCVDGENGFH 682
Query: 380 CDCPPGRTGKFC 391
C CPPG C
Sbjct: 683 CLCPPGSLPPLC 694
Score = 38.5 bits (88), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 38/91 (41%), Gaps = 9/91 (9%)
Query: 316 GTSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLT 375
G S C H G C N +F C+C G+ GP C + CD + C G +C
Sbjct: 818 GASPCGPH-----GTCTNLPGSFRCICHGGYTGPFCDQDIDDCDP--NPCLNGGSCQDGV 870
Query: 376 HSYECDCPPGRTGKFCEK--DESLSDISFSG 404
S+ C C G G C + DE LS G
Sbjct: 871 GSFSCSCLSGFAGPRCARDVDECLSSPCGPG 901
Score = 37.7 bits (86), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Query: 320 CHNHTCSHGGACMNHG----ATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATC-VPL 374
CH+ C+ G C + A FSC C G+ GP C S + C S+ C+ GA C V
Sbjct: 84 CHSGPCAGRGVCQSSVVAGVARFSCRCLRGFRGPDC-SLPDPCFSS--PCAHGAPCSVGS 140
Query: 375 THSYECDCPPGRTGKFCEKD 394
Y C CPPG G+ C D
Sbjct: 141 DGRYACACPPGYQGRNCRSD 160
Score = 37.4 bits (85), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 41/98 (41%), Gaps = 5/98 (5%)
Query: 298 GINLYKTRAAEGRGVGQCGT--SQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRY 355
GIN Y G C ++C + C GG+C++ F CLC G PLC
Sbjct: 639 GINRYDCVCQPGFTGPLCNVEINECASSPCGEGGSCVDGENGFHCLCPPGSLPPLCLPAN 698
Query: 356 NLCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCEK 393
+ C CS G C ++C C PG +G C +
Sbjct: 699 HPC--AHKPCSHG-VCHDAPGGFQCVCDPGWSGPRCSQ 733
Score = 37.0 bits (84), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 319 QCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSY 378
+C + C +GG C++ + C C G G C N+ D + C+FG C + Y
Sbjct: 587 ECRSQPCRYGGKCLDLVDKYLCRCPPGTTGVNC--EVNIDDCASNPCTFG-VCRDGINRY 643
Query: 379 ECDCPPGRTGKFC 391
+C C PG TG C
Sbjct: 644 DCVCQPGFTGPLC 656
Score = 36.2 bits (82), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 320 CHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYE 379
C + C HGG C + F C C +G+ G C + + C ++ C G CV T +Y
Sbjct: 968 CFSRPCLHGGICNPTHSGFECTCREGFTGNQCQNPVDWC--SQAPCQNGGRCV-QTGAY- 1023
Query: 380 CDCPPGRTGKFCE 392
C CPP +G C+
Sbjct: 1024 CICPPEWSGPLCD 1036
Score = 35.8 bits (81), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
Query: 320 CHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYE 379
C + C GG C + G F C CA G+ G C L T C G C
Sbjct: 740 CESQPCQAGGTCTSDGIGFHCTCAPGFQGHQCEV---LSPCTPSLCEHGGHCESDPDQLT 796
Query: 380 -CDCPPGRTGKFCEKD 394
C CPPG G C++D
Sbjct: 797 VCSCPPGWQGPRCQQD 812
Score = 35.8 bits (81), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 30/77 (38%), Gaps = 7/77 (9%)
Query: 320 CHNHTCSHGGACM-----NHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPL 374
C + C HGG C G TF+C C ++G C C + C G C
Sbjct: 1252 CESQPCQHGGQCRPSLGRGGGLTFTCHCVQPFWGLRCERVARSCRELQ--CPVGIPCQQT 1309
Query: 375 THSYECDCPPGRTGKFC 391
C CPPG +G C
Sbjct: 1310 ARGPRCACPPGLSGPSC 1326
>sp|A3KN33|EGFLA_BOVIN Pikachurin OS=Bos taurus GN=EGFLAM PE=2 SV=1
Length = 1018
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 82/167 (49%), Gaps = 13/167 (7%)
Query: 216 KSKRGGY-TVRVGKNGQQCWLMVDNMGNVTSKSPGRLTQLNTKPMLYLGGHFSKNFSILP 274
K K GG+ TV + ++G L ++N VT +S G+ +++ + LYLGG S + L
Sbjct: 474 KIKLGGWHTVTLYRDGLNGLLQLNNGTPVTGQSQGQYSKITFRTPLYLGGAPSAYW--LV 531
Query: 275 HDLPLHSGFSGCIFDVELSAGNVGINLYK-TRAAEGRGVGQCGTSQCHNHTCSHGGACMN 333
+ GF GC+ + ++ + + + +A G VG+C + C +C +GG CM
Sbjct: 532 RATGTNRGFQGCVQALTVNGKRLDLRPWPLGKALSGADVGECSSGICDEASCINGGTCMA 591
Query: 334 HGA-TFSCLCADGWFGPLCASRYNLC-----DSTRHNCSFGATCVPL 374
A ++ CLC G+ G C + L +S R S+ AT PL
Sbjct: 592 SKADSYICLCPLGFRGRHCEDAFTLTIPQFKESLR---SYAATPWPL 635
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 17/102 (16%)
Query: 222 YTVRVGKNGQQCWLMVDNMGNVTSKSPGRLTQLNTKPMLYLGGHFSKNFSILPHDLPLHS 281
+ V+ ++GQ + VD+ G T KSPG + QLN LY+GG ++ LH+
Sbjct: 927 HRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGM---------KEIALHT 977
Query: 282 ------GFSGCIFDVELSAGNVGINLYKTRAAEGRGVGQCGT 317
G GCI LS + I+L + A +G+ + CG
Sbjct: 978 NRQYMRGLVGCISHFTLST-DYHISLVED-AVDGKNINTCGA 1017
Score = 38.9 bits (89), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 365 CSFGATCVPLTHSYECDCPPGRTGKFCEK--DESLSDISFSGRRSYISLPSSELHLIINE 422
C+ G +C P YECDCP G G C+K E++ F G RSY++ + ++ ++
Sbjct: 802 CAHGGSCRPRKEGYECDCPLGFEGLHCQKAITEAIEIPQFIG-RSYLTYDNPDILKRVSG 860
Query: 423 SLSD 426
S S+
Sbjct: 861 SRSN 864
Score = 35.4 bits (80), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 51/127 (40%), Gaps = 9/127 (7%)
Query: 225 RVGKNGQQCWLMVDNMGNVTSKSPGRLTQLNTKPMLYLGGHFSKNFSILPHDLPLHSGFS 284
R KNG L VD V + G TQ+ +++GG N+ + + + FS
Sbjct: 711 RTAKNG---ILQVDKQKAVEGMAEGGFTQIKCNSDIFIGG--VPNYDDVKKNSGILKPFS 765
Query: 285 GCIFDVELSAGNVGINLYKTRAAEGRGVGQCGTSQCHNHTCSHGGACMNHGATFSCLCAD 344
G I + L+ + + K G V + C C+HGG+C + C C
Sbjct: 766 GSIQKIILNDRTIHV---KHDFTWGVNV-ENAAHPCVGSPCAHGGSCRPRKEGYECDCPL 821
Query: 345 GWFGPLC 351
G+ G C
Sbjct: 822 GFEGLHC 828
>sp|Q5IJ48|CRUM2_HUMAN Protein crumbs homolog 2 OS=Homo sapiens GN=CRB2 PE=1 SV=2
Length = 1285
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 84/202 (41%), Gaps = 31/202 (15%)
Query: 227 GKNGQQCWLMVDNMGNVTSKSPGRLTQLNTKPMLYLG--GHFSKNFSI------LPHDLP 278
G +G+ C + D + + GR Q + P LY G F FS L H P
Sbjct: 252 GYSGELCEVDEDECASSPCQHGGRCLQ-RSDPALYGGVQAAFPGAFSFRHAAGFLCHCPP 310
Query: 279 LHSGFSG--CIFDVELSAGNVGINL---------YKTRAAEGRGVGQC--GTSQCHNHTC 325
GF G C +V+ A +N ++ +G C +C + C
Sbjct: 311 ---GFEGADCGVEVDECASRPCLNGGHCQDLPNGFQCHCPDGYAGPTCEEDVDECLSDPC 367
Query: 326 SHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPL----THSYECD 381
HGG C + A + C C + W G C+ + C H C ATC+P+ HSY C
Sbjct: 368 LHGGTCSDTVAGYICRCPETWGGRDCSVQLTGCQG--HTCPLAATCIPIFESGVHSYVCH 425
Query: 382 CPPGRTGKFCEKDESLSDISFS 403
CPPG G FC ++ + S ++ S
Sbjct: 426 CPPGTHGPFCGQNTTFSVMAGS 447
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 58/158 (36%), Gaps = 35/158 (22%)
Query: 279 LHSGFSGCIFDVELSAGNVGINLYKTRAAEGRG---------------VGQCGTSQCHNH 323
L F+GC+ V L G + + L + R G +G G C
Sbjct: 1006 LAENFTGCLGRVAL--GGLPLPLARPRPGAAPGAREHFASWPGTPAPILGCRGAPVCAPS 1063
Query: 324 TCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDCP 383
C H GAC + F+C C GW GP C + + C S C+ G +EC CP
Sbjct: 1064 PCLHDGACRDLFDAFACACGPGWEGPRCEAHVDPCHSA--PCARGRCHTHPDGRFECRCP 1121
Query: 384 PGRTGKFCEKDESLSDISFSGRRSYISLPSSELHLIIN 421
PG F G R + +PS E L +
Sbjct: 1122 PG----------------FGGPRCRLPVPSKECSLNVT 1143
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 319 QCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSY 378
+C + C HGG+C++ +F C+CA G+ G C + C S C+ G TC L + +
Sbjct: 149 ECASAPCLHGGSCLDGVGSFRCVCAPGYGGTRCQLDLDECQS--QPCAHGGTCHDLVNGF 206
Query: 379 ECDCP-PGRTGKFCEKD 394
CDC G G CE++
Sbjct: 207 RCDCAGTGYEGTHCERE 223
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 48/126 (38%), Gaps = 15/126 (11%)
Query: 272 ILPHDLPLHSGFSGCIFDVELSAGNVGINLYKTRAAEGRGVGQCGTSQCHNHTCSHGGAC 331
+P + P C E A G Y E RG C T CH HG C
Sbjct: 33 TVPSEPPSACASDPCAPGTECQATESGG--YTCGPMEPRG---CATQPCH-----HGALC 82
Query: 332 MNHGAT---FSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDCPPGRTG 388
+ G F C C G+ GP C + C S C GATC L YEC CP G G
Sbjct: 83 VPQGPDPTGFRCYCVPGFQGPRCELDIDECAS--RPCHHGATCRNLADRYECHCPLGYAG 140
Query: 389 KFCEKD 394
CE +
Sbjct: 141 VTCEME 146
Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 5/101 (4%)
Query: 298 GINLYKTRAAEGRGVGQC--GTSQCHNHTCSHGGACMNHGATFSCLCAD-GWFGPLCASR 354
G+ ++ A G G +C +C + C+HGG C + F C CA G+ G C
Sbjct: 164 GVGSFRCVCAPGYGGTRCQLDLDECQSQPCAHGGTCHDLVNGFRCDCAGTGYEGTHCERE 223
Query: 355 YNLCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCEKDE 395
C S C A+C+ S+ C C PG +G+ CE DE
Sbjct: 224 VLECASA--PCEHNASCLEGLGSFRCLCWPGYSGELCEVDE 262
Score = 40.8 bits (94), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Query: 319 QCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSY 378
+C + C HG C N + C C G+ G C + C S C G +C+ S+
Sbjct: 111 ECASRPCHHGATCRNLADRYECHCPLGYAGVTCEMEVDECASA--PCLHGGSCLDGVGSF 168
Query: 379 ECDCPPGRTGKFCEKD 394
C C PG G C+ D
Sbjct: 169 RCVCAPGYGGTRCQLD 184
Score = 35.8 bits (81), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 42/109 (38%), Gaps = 25/109 (22%)
Query: 319 QCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCV------ 372
+C + C H +C+ +F CLC G+ G LC + C S+ C G C+
Sbjct: 226 ECASAPCEHNASCLEGLGSFRCLCWPGYSGELCEVDEDECASS--PCQHGGRCLQRSDPA 283
Query: 373 ---------PLTHSYE------CDCPPGRTGKFC--EKDESLSDISFSG 404
P S+ C CPPG G C E DE S +G
Sbjct: 284 LYGGVQAAFPGAFSFRHAAGFLCHCPPGFEGADCGVEVDECASRPCLNG 332
>sp|Q14517|FAT1_HUMAN Protocadherin Fat 1 OS=Homo sapiens GN=FAT1 PE=1 SV=2
Length = 4588
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 79/188 (42%), Gaps = 17/188 (9%)
Query: 222 YTVRVGKNGQQCWLMVDNMGNVTSKSPGRLTQLNTKPMLYLGGHFSKNFSILPHDLPLHS 281
+ V + NG L++D + + +PG L LN ++ GGH + + + +
Sbjct: 3912 HAVALEVNGNYARLVLDQVHTASGTAPGTLKTLNLDNYVFFGGHIRQQGTRHGRSPQVGN 3971
Query: 282 GFSGCIFDVELSAGNVGINLYKTRA----AEGRGVGQ----CGTSQCHNHTCSHGGACMN 333
GF GC+ + L+ + +N K R+ E V T C ++ C +GG C
Sbjct: 3972 GFRGCMDSIYLNGQELPLN-SKPRSYAHIEESVDVSPGCFLTATEDCASNPCQNGGVCNP 4030
Query: 334 HGA-TFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCE 392
A + C C+ + G C N C S C +G TCV + C C TG+ C+
Sbjct: 4031 SPAGGYYCKCSALYIGTHCEISVNPCSS--KPCLYGGTCVVDNGGFVCQCRGLYTGQRCQ 4088
Query: 393 -----KDE 395
KDE
Sbjct: 4089 LSPYCKDE 4096
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Query: 320 CHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYE 379
C + C +GG C + C C G+ G C S + C + + C GA C SY
Sbjct: 4093 CKDEPCKNGGTCFDSLDGAVCQCDSGFRGERCQSDIDEC--SGNPCLHGALCENTHGSYH 4150
Query: 380 CDCPPGRTGKFCE 392
C+C G+ CE
Sbjct: 4151 CNCSHEYRGRHCE 4163
>sp|P18168|SERR_DROME Protein serrate OS=Drosophila melanogaster GN=Ser PE=1 SV=3
Length = 1404
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 58/114 (50%), Gaps = 5/114 (4%)
Query: 319 QCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSY 378
QC C +GG C + F C+CA G+ GP C R N+ + + C GATC+ Y
Sbjct: 878 QCRGQPCHNGGTCESGAGWFRCVCAQGFSGPDC--RINVNECSPQPCQGGATCIDGIGGY 935
Query: 379 ECDCPPGRTGKFCEKDESLSDISFSGRRSYISLPSSELHLIINESLSDISFSGR 432
C CPPGR G CE LSD + + + ++ S L +++ DI+ +GR
Sbjct: 936 SCICPPGRHGLRCEI--LLSDPKSACQNASNTI-SPYTALNRSQNWLDIALTGR 986
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 325 CSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDCPP 384
C + C N +F+C+C +GW G CA + C C GATC+ L + Y C C
Sbjct: 578 CINAKECRNQPGSFACICKEGWGGVTCAENLDDCVG---QCRNGATCIDLVNDYRCACAS 634
Query: 385 GRTGKFCEKD 394
G G+ CE D
Sbjct: 635 GFKGRDCETD 644
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 13/101 (12%)
Query: 299 INLYKTRAAEGRGVGQCGTS--QCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYN 356
+N Y+ A G C T +C C +GG C++ F+C+C G+ G +
Sbjct: 625 VNDYRCACASGFKGRDCETDIDECATSPCRNGGECVDMVGKFNCICPLGYSG-------S 677
Query: 357 LCDSTRHNCS----FGATCVPLTHSYECDCPPGRTGKFCEK 393
LC+ + NC+ C+ Y C CPP R GK CE+
Sbjct: 678 LCEEAKENCTPSPCLEGHCLNTPEGYYCHCPPDRAGKHCEQ 718
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 338 FSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCEKDESL 397
F+C CA GW GP C N+ + C G TC+ L + C+CPP G C+ D +
Sbjct: 471 FTCDCAAGWTGPTC--EINIDECAGGPCEHGGTCIDLIGGFRCECPPEWHGDVCQVDVNE 528
Query: 398 SDISFSGRRSYISLPSSELHLIINESLSDISF 429
+ S + +L ++ II +LS +
Sbjct: 529 CEAPHSAGIAANALLTTTATAIIGSNLSSTAL 560
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 318 SQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHS 377
++C + C +GG C++ F+C C GW G C+ R C + + C G TC+P
Sbjct: 797 NECSPNPCRNGGICLDGDGDFTCECMSGWTGKRCSERATGCYAGQ--CQNGGTCMPGAPD 854
Query: 378 YE----CDCPPGRTGKFCEK 393
C C PG TG FC +
Sbjct: 855 KALQPHCRCAPGWTGLFCAE 874
Score = 40.4 bits (93), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 325 CSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDCPP 384
C +G C++ + C CA G+ G C + + C ++ C G CV + + C CP
Sbjct: 615 CRNGATCIDLVNDYRCACASGFKGRDCETDIDECATS--PCRNGGECVDMVGKFNCICPL 672
Query: 385 GRTGKFCEK 393
G +G CE+
Sbjct: 673 GYSGSLCEE 681
Score = 38.9 bits (89), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 30/69 (43%), Gaps = 5/69 (7%)
Query: 325 CSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLT-HSYECDCP 383
C HG +G+ + C+C W G LC N C T C G TC Y C C
Sbjct: 321 CKHGSC---NGSAWKCVCDTNWGGILCDQDLNFC-GTHEPCKHGGTCENTAPDKYRCTCA 376
Query: 384 PGRTGKFCE 392
G +G+ CE
Sbjct: 377 EGLSGEQCE 385
Score = 33.9 bits (76), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 319 QCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDS 360
+C C HGG C++ F C C W G +C N C++
Sbjct: 490 ECAGGPCEHGGTCIDLIGGFRCECPPEWHGDVCQVDVNECEA 531
>sp|O14594|NCAN_HUMAN Neurocan core protein OS=Homo sapiens GN=NCAN PE=2 SV=3
Length = 1321
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 13/118 (11%)
Query: 288 FDVELSAGNVGINLYKTRAAEGR-----------GVGQCGTSQCHNHTCSHGGACMNHGA 336
F++E+ AG+ G+ + A G G + + C N+ C HGG C +G
Sbjct: 969 FELEVLAGSPGVESFWEEVASGEEPALPGTPMNAGAEEVHSDPCENNPCLHGGTCNANGT 1028
Query: 337 TFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCEKD 394
+ C C G+ G C ++ D C G TC+ + + C C P G FCEKD
Sbjct: 1029 MYGCSCDQGFAGENC--EIDIDDCLCSPCENGGTCIDEVNGFVCLCLPSYGGSFCEKD 1084
>sp|Q80YA8|CRUM2_MOUSE Protein crumbs homolog 2 OS=Mus musculus GN=Crb2 PE=2 SV=3
Length = 1282
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 319 QCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPL---- 374
+C + C HGG C + A + C C + W G C+ + C H C ATC+P
Sbjct: 365 ECQSEPCLHGGTCSDTVAGYICQCPEAWGGHDCSVQLTGCQG--HTCPLAATCIPTFKSG 422
Query: 375 THSYECDCPPGRTGKFCEKDESLSDISFS 403
H Y C CPPG G FC ++ + S +S S
Sbjct: 423 LHGYFCRCPPGTYGPFCGQNTTFSVVSGS 451
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 47/101 (46%), Gaps = 5/101 (4%)
Query: 298 GINLYKTRAAEGRGVGQC--GTSQCHNHTCSHGGACMNHGATFSCLCAD-GWFGPLCASR 354
G+ Y+ A G C +C + C+HGG C + F C CAD G+ G C
Sbjct: 168 GVGSYRCVCAPGYAGANCQLDVDECQSQPCAHGGVCHDLVNGFRCDCADTGYEGARCEQE 227
Query: 355 YNLCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCEKDE 395
C S C+ A+C+ S+ C C PG +G+ CE DE
Sbjct: 228 VLECASA--PCAHNASCLDGFRSFRCLCWPGFSGERCEVDE 266
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 51/128 (39%), Gaps = 19/128 (14%)
Query: 279 LHSGFSGCIFDVELSAGNVGINLYKTRAAEGRG---------------VGQCGTSQCHNH 323
L F+GC+ V L G+ + L R+ G +G G C
Sbjct: 1003 LAENFTGCLGRVAL--GDFPLPLAPPRSGTVSGAREHFVAWPGSPAVSLGCRGGPVCSPS 1060
Query: 324 TCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDCP 383
C HGGAC + F+C C W GP C R + C ST C G +EC CP
Sbjct: 1061 PCLHGGACRDLFDAFACSCGPAWEGPRCEIRADPCRST--PCVRGQCHARPDGRFECRCP 1118
Query: 384 PGRTGKFC 391
PG +G C
Sbjct: 1119 PGFSGPRC 1126
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 319 QCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSY 378
+C + C HGG C N + C C G+ G C + + C S C G +C+ SY
Sbjct: 115 ECASRPCQHGGTCQNLADHYECHCPLGYAGVTCEAEVDECSSA--PCLHGGSCLDGVGSY 172
Query: 379 ECDCPPGRTGKFCEKD 394
C C PG G C+ D
Sbjct: 173 RCVCAPGYAGANCQLD 188
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 38/86 (44%), Gaps = 10/86 (11%)
Query: 312 VGQCGTSQCHNHTCSHGGACMNHGA---TFSCLCADGWFGPLCASRYNLCDSTRHNCSFG 368
+G C T CH HG C+ G +F C C G+ GP C + C S C G
Sbjct: 72 LGGCATQPCH-----HGALCVPQGPDPNSFRCYCVPGFQGPHCELDIDECAS--RPCQHG 124
Query: 369 ATCVPLTHSYECDCPPGRTGKFCEKD 394
TC L YEC CP G G CE +
Sbjct: 125 GTCQNLADHYECHCPLGYAGVTCEAE 150
Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 319 QCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSY 378
+C + C HGG+C++ ++ C+CA G+ G C + C S C+ G C L + +
Sbjct: 153 ECSSAPCLHGGSCLDGVGSYRCVCAPGYAGANCQLDVDECQS--QPCAHGGVCHDLVNGF 210
Query: 379 ECDCP-PGRTGKFCEKD 394
CDC G G CE++
Sbjct: 211 RCDCADTGYEGARCEQE 227
Score = 37.7 bits (86), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Query: 322 NHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECD 381
N TC G C +C C +G G C S C+++ C G TC + +EC
Sbjct: 1138 NSTCKDGAPCEGGPLGTNCSCQEGLAGLRCQSLDKPCEAS--PCLNGGTCRVASGIFECT 1195
Query: 382 CPPGRTGKFCE 392
C G +G+FCE
Sbjct: 1196 CSAGFSGQFCE 1206
Score = 32.3 bits (72), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 63/150 (42%), Gaps = 27/150 (18%)
Query: 245 SKSPGRLTQLNTKPMLYLGGHFSKNFSILPHDLPLHSG-FSGCIFDVELSAGNVGINLYK 303
S P +L L + LY+GG F P D L G F GC+ D++L+ ++ + +
Sbjct: 735 SFGPDQLQDLGQR--LYVGGRF------YPDDTQLWGGPFRGCLQDLQLN--SIHLPFFS 784
Query: 304 T-----------RAAEGRGVGQCGTSQ--CHNHTCSHGGACMNHGATFSCLCADGWFGPL 350
+ A + + Q S+ C+ + C +GG C F C C++ + GP
Sbjct: 785 SPMENSSWPSELEAGQSSNLTQGCVSEDTCNPNPCFNGGTCHVTWNDFYCTCSENFTGPT 844
Query: 351 CASRYNLCDSTRHNCSFGATCVPLTHSYEC 380
CA + R C ATC + + C
Sbjct: 845 CAQQRWC---PRQPCLPPATCEEVPDGFVC 871
Score = 32.3 bits (72), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 23/97 (23%)
Query: 319 QCHNHTCSHGGACM---------------------NHGATFSCLCADGWFGPLCASRYNL 357
+C + C +GG C+ +H A F C C G+ G C+ +
Sbjct: 268 ECASGPCQNGGQCLQRSDPTLYGGVQAIFPGAFSFSHAAGFLCSCPLGFAGNDCSMDVDE 327
Query: 358 CDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCEKD 394
C S C G +C L + ++C C G TG C++D
Sbjct: 328 CASG--PCLNGGSCQDLPNGFQCYCQDGYTGLTCQED 362
>sp|Q5IS41|NCAN_PANTR Neurocan core protein OS=Pan troglodytes GN=NCAN PE=2 SV=1
Length = 1321
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 13/118 (11%)
Query: 288 FDVELSAGNVGINLYKTRAAEGR-----------GVGQCGTSQCHNHTCSHGGACMNHGA 336
F++E+ AG+ G+ + A G G + + C N+ C HGG C +G
Sbjct: 969 FELEVLAGSPGVESFWEEVASGEEPALPGTPMKAGAEEVHSDPCENNPCLHGGTCNANGT 1028
Query: 337 TFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCEKD 394
+ C C G+ G C ++ D C G TC+ + + C C P G FCEKD
Sbjct: 1029 MYGCSCDQGFAGENC--EIDIDDCLCSPCENGGTCIDEVNGFVCLCLPSYGGSFCEKD 1084
>sp|Q2PZL6|FAT4_MOUSE Protocadherin Fat 4 OS=Mus musculus GN=Fat4 PE=1 SV=2
Length = 4981
Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 318 SQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHS 377
++C C HG C N F+C+C G+ G +C S N C+ + C G +C S
Sbjct: 3904 NECLPSPCKHGAVCQNFPGGFNCVCKTGYTGKMCESSVNYCEC--NPCFNGGSCQSGVES 3961
Query: 378 YECDCPPGRTGKFCEKDESLSDISFSGRRSYISLPS 413
Y C CP G GK CE L+ F SY+ PS
Sbjct: 3962 YYCHCPFGVFGKHCE----LNSYGFE-ELSYMEFPS 3992
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 35/81 (43%), Gaps = 7/81 (8%)
Query: 312 VGQCGTSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATC 371
+ +C + CHN GG C N FSC C +G+ G C N C C GA C
Sbjct: 3865 IDECLPAPCHN-----GGTCHNLVGGFSCSCPEGFTGRACERDINEC--LPSPCKHGAVC 3917
Query: 372 VPLTHSYECDCPPGRTGKFCE 392
+ C C G TGK CE
Sbjct: 3918 QNFPGGFNCVCKTGYTGKMCE 3938
Score = 42.0 bits (97), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 36/97 (37%), Gaps = 24/97 (24%)
Query: 320 CHNHTCSHGGACMNHGATFS----------------------CLCADGWFGPLCASRYNL 357
C + C +GG+C+ A S C C G+ G C +
Sbjct: 3808 CIHGPCQNGGSCLRRLAVGSALKIQESLPVIIVANEPLQPSQCKCVPGYAGSWCEVDIDE 3867
Query: 358 CDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCEKD 394
C C G TC L + C CP G TG+ CE+D
Sbjct: 3868 C--LPAPCHNGGTCHNLVGGFSCSCPEGFTGRACERD 3902
Score = 40.4 bits (93), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 67/178 (37%), Gaps = 27/178 (15%)
Query: 222 YTVRVGKNGQQCWLMVDNMGNVTSKSP----GRLTQLNTKPMLYLGGHFSKNFSILPHDL 277
+T R+ KNG L VD + N P G + L+ + LGG I P+
Sbjct: 4307 HTFRISKNGSITVLSVDRIHNRDIVHPTQDFGGIEVLS----MSLGG-------IPPNQA 4355
Query: 278 --PLHSGFSGCIFDVELSAGNVGINLYKTRAAEGRGVGQCGTSQCHNHTCSHGGACMNHG 335
+GF+GCI V ++ + + A+ + T C C ++
Sbjct: 4356 HRDTQTGFNGCIASVLYGGESLPFSGKHSLASISK------TDPSVKIGCRGPNICASNP 4409
Query: 336 ATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVP-LTHSYECDCPPGRTGKFCE 392
LC + W+ C D H C G +C P L Y C CP TG+ CE
Sbjct: 4410 CWGDLLCINQWYAYKCVPP---GDCASHPCQNGGSCEPGLLSGYTCSCPESHTGRTCE 4464
Score = 38.9 bits (89), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 362 RHNCSFGATCVPLTHSYECDCPPGRTGKFCEK----DESLSDISFSGRRSYISLPSSELH 417
R+ C G TCV +C C G TGK+CEK D +LS + GR Y S +
Sbjct: 4170 RNPCQHGGTCVDFWSWQQCQCMEGLTGKYCEKSVTPDTALS-LEGKGRLDYHMSQSEKRE 4228
Query: 418 LIINESLSDISF 429
++ +S+ D +
Sbjct: 4229 YLLTQSIRDTTL 4240
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 23/100 (23%)
Query: 257 KPMLYLGGHFSKNFSILPHDLPLHSGFSGCIFDVELSAGNVGINLYKTRAAEGRGV-GQC 315
+P+L GH HD F GC+ + ++ G L ++A +G+ QC
Sbjct: 4118 EPILQRRGHVES------HD------FVGCVMEFAVN----GRPLEPSQALAAQGILDQC 4161
Query: 316 ----GTSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLC 351
GT C + C HGG C++ + C C +G G C
Sbjct: 4162 PRLEGT--CARNPCQHGGTCVDFWSWQQCQCMEGLTGKYC 4199
>sp|Q8BNA6|FAT3_MOUSE Protocadherin Fat 3 OS=Mus musculus GN=Fat3 PE=1 SV=2
Length = 4555
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 318 SQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHS 377
+ C + C +GG+C G TF C C G G C + C+ R C G +CV L S
Sbjct: 4061 TACFPNPCRNGGSCDPIGNTFVCSCKAGLTGVTCEDDVDECE--REECENGGSCVNLFGS 4118
Query: 378 YECDCPPGRTGKFC 391
+ C+C PG G++C
Sbjct: 4119 FFCNCTPGYVGQYC 4132
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 51/120 (42%), Gaps = 9/120 (7%)
Query: 282 GFSGCIFDVELSAGNVGINLYKTRAAEGRGVGQCG------TSQCHNHTCSHGGACMN-H 334
GF GC+ V L+ + + ++ AE G+ + C C HGG+C +
Sbjct: 3980 GFQGCLDSVVLNHYELPLQNKRSSFAEVVGLTELKLGCVLYPDACQRSPCLHGGSCSSLP 4039
Query: 335 GATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCEKD 394
+ C C + G C S C + C G +C P+ +++ C C G TG CE D
Sbjct: 4040 SGGYQCSCLSQFTGTNCESEITAC--FPNPCRNGGSCDPIGNTFVCSCKAGLTGVTCEDD 4097
Score = 37.0 bits (84), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 319 QCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASR 354
+C C +GG+C+N +F C C G+ G C R
Sbjct: 4100 ECEREECENGGSCVNLFGSFFCNCTPGYVGQYCGLR 4135
>sp|Q04721|NOTC2_HUMAN Neurogenic locus notch homolog protein 2 OS=Homo sapiens GN=NOTCH2
PE=1 SV=3
Length = 2471
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 317 TSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTH 376
T C +H C++G C FSC C G+ G C + N CD H C G TC+ L
Sbjct: 145 TDACLSHPCANGSTCTTVANQFSCKCLTGFTGQKCETDVNECDIPGH-CQHGGTCLNLPG 203
Query: 377 SYECDCPPGRTGKFCE 392
SY+C CP G TG++C+
Sbjct: 204 SYQCQCPQGFTGQYCD 219
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 323 HTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDC 382
+ C +GG C N + C+C +GW G C+ N+ D +C+ G+TC+ S+ C C
Sbjct: 307 NACQNGGTCANRNGGYGCVCVNGWSGDDCSE--NIDDCAFASCTPGSTCIDRVASFSCMC 364
Query: 383 PPGRTGKFCEKDES 396
P G+ G C D++
Sbjct: 365 PEGKAGLLCHLDDA 378
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 318 SQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHS 377
++C ++ C + G C++ F CLC G+ GP+C + C ST C GA C+ +
Sbjct: 496 NECQSNPCVNNGQCVDKVNRFQCLCPPGFTGPVCQIDIDDCSSTP--CLNGAKCIDHPNG 553
Query: 378 YECDCPPGRTGKFCEKD 394
YEC C G TG CE++
Sbjct: 554 YECQCATGFTGVLCEEN 570
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 320 CHNHTCSHGGACMNHGA-TFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSY 378
C C +GG C G TF C C G+ G C N+ D H C G CV ++Y
Sbjct: 225 CAPSPCVNGGTCRQTGDFTFECNCLPGFEGSTC--ERNIDDCPNHRCQNGGVCVDGVNTY 282
Query: 379 ECDCPPGRTGKFCEKD 394
C CPP TG+FC +D
Sbjct: 283 NCRCPPQWTGQFCTED 298
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 50/112 (44%), Gaps = 17/112 (15%)
Query: 281 SGFSGCIFDVELSAGNVGINLYKTRAAEGRGVGQCGTSQCHNHTCSHGGACMNHGATFSC 340
SG++G DV NV ++ +R RGV H C H G C+N G T C
Sbjct: 1091 SGWAGAYCDVP----NVSCDIAASR----RGVLV-------EHLCQHSGVCINAGNTHYC 1135
Query: 341 LCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCE 392
C G+ G C + + C S + C GATC Y C+C PG G CE
Sbjct: 1136 QCPLGYTGSYCEEQLDECAS--NPCQHGATCSDFIGGYRCECVPGYQGVNCE 1185
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 299 INLYKTRAAEGRGVGQC--GTSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYN 356
+N Y + G C ++C +C +GG C++ +FSCLC G+ G C N
Sbjct: 968 VNSYTCKCQAGFDGVHCENNINECTESSCFNGGTCVDGINSFSCLCPVGFTGSFCLHEIN 1027
Query: 357 LCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCE 392
C S H C TCV +Y C CP G TGK C+
Sbjct: 1028 ECSS--HPCLNEGTCVDGLGTYRCSCPLGYTGKNCQ 1061
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 58/123 (47%), Gaps = 15/123 (12%)
Query: 282 GFSG--CIFDVELSAGNV---------GINLYKTRAAEGRGVGQCGT--SQCHNHTCSHG 328
GFSG C D++ N G+N + G +C T ++C + C +G
Sbjct: 902 GFSGMDCEEDIDDCLANPCQNGGSCMDGVNTFSCLCLPGFTGDKCQTDMNECLSEPCKNG 961
Query: 329 GACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDCPPGRTG 388
G C ++ +++C C G+ G C + N C T +C G TCV +S+ C CP G TG
Sbjct: 962 GTCSDYVNSYTCKCQAGFDGVHCENNINEC--TESSCFNGGTCVDGINSFSCLCPVGFTG 1019
Query: 389 KFC 391
FC
Sbjct: 1020 SFC 1022
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 320 CHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYE 379
C + C +GG+CM+ TFSCLC G+ G C + N C S C G TC +SY
Sbjct: 915 CLANPCQNGGSCMDGVNTFSCLCLPGFTGDKCQTDMNECLS--EPCKNGGTCSDYVNSYT 972
Query: 380 CDCPPGRTGKFCEK--DESLSDISFSG 404
C C G G CE +E F+G
Sbjct: 973 CKCQAGFDGVHCENNINECTESSCFNG 999
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 319 QCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSY 378
+C ++ C HG C + + C C G+ G C Y + + C G TC+ L + +
Sbjct: 1152 ECASNPCQHGATCSDFIGGYRCECVPGYQGVNC--EYEVDECQNQPCQNGGTCIDLVNHF 1209
Query: 379 ECDCPPGRTGKFCEKD 394
+C CPPG G CE++
Sbjct: 1210 KCSCPPGTRGLLCEEN 1225
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 318 SQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHS 377
++C +H C + G C++ T+ C C G+ G C + NLC +R C TCV
Sbjct: 1027 NECSSHPCLNEGTCVDGLGTYRCSCPLGYTGKNCQTLVNLC--SRSPCKNKGTCVQKKAE 1084
Query: 378 YECDCPPGRTGKFCEKDESLSDISFSGR 405
+C CP G G +C+ DI+ S R
Sbjct: 1085 SQCLCPSGWAGAYCDVPNVSCDIAASRR 1112
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Query: 320 CHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYE 379
C NH C +GG C++ T++C C W G C + C + C G TC Y
Sbjct: 264 CPNHRCQNGGVCVDGVNTYNCRCPPQWTGQFCTEDVDECLLQPNACQNGGTCANRNGGYG 323
Query: 380 CDCPPGRTGKFCEKDESLSDISFS 403
C C G +G C E++ D +F+
Sbjct: 324 CVCVNGWSGDDCS--ENIDDCAFA 345
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 318 SQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHS 377
++CH+ C + C++ F+CLC G+ G C N C S + C CV +
Sbjct: 458 NECHSDPCQNDATCLDKIGGFTCLCMPGFKGVHCELEINECQS--NPCVNNGQCVDKVNR 515
Query: 378 YECDCPPGRTGKFCEKD 394
++C CPPG TG C+ D
Sbjct: 516 FQCLCPPGFTGPVCQID 532
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 52/117 (44%), Gaps = 10/117 (8%)
Query: 319 QCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSY 378
+C N C +GG C++ F C C G G LC + C H C G C+ Y
Sbjct: 1190 ECQNQPCQNGGTCIDLVNHFKCSCPPGTRGLLCEENIDDCARGPH-CLNGGQCMDRIGGY 1248
Query: 379 ECDCPPGRTGKFCEKD--ESLSD-ISFSGRRSYISLPSSELHLIINESLSDISFSGR 432
C C PG G+ CE D E LS+ S G I L + +L + S +F+GR
Sbjct: 1249 SCRCLPGFAGERCEGDINECLSNPCSSEGSLDCIQL--TNDYLCVCRS----AFTGR 1299
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 45/114 (39%), Gaps = 12/114 (10%)
Query: 298 GINLYKTRAAEGRGVGQCGT--SQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRY 355
G+ Y+ G C T + C C + G C+ A CLC GW G C
Sbjct: 1043 GLGTYRCSCPLGYTGKNCQTLVNLCSRSPCKNKGTCVQKKAESQCLCPSGWAGAYCDVPN 1102
Query: 356 NLCDST--------RHNCSFGATCVPLTHSYECDCPPGRTGKFCEK--DESLSD 399
CD H C C+ +++ C CP G TG +CE+ DE S+
Sbjct: 1103 VSCDIAASRRGVLVEHLCQHSGVCINAGNTHYCQCPLGYTGSYCEEQLDECASN 1156
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Query: 321 HNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYEC 380
+++ C H G C+N F C C G+ GP C N C S C ATC+ + C
Sbjct: 423 NSNPCEHAGKCVNTDGAFHCECLKGYAGPRCEMDINECHSDP--CQNDATCLDKIGGFTC 480
Query: 381 DCPPGRTGKFCE 392
C PG G CE
Sbjct: 481 LCMPGFKGVHCE 492
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 63/154 (40%), Gaps = 18/154 (11%)
Query: 282 GFSG--CIFDVELSAGNV---------GINLYKTRAAEGRGVGQC--GTSQCHNHTCSHG 328
GF+G C D++ A N G+N ++ EG C ++C ++ C HG
Sbjct: 673 GFTGQRCNIDIDECASNPCRKGATCINGVNGFRCICPEGPHHPSCYSQVNECLSNPCIHG 732
Query: 329 GACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDCPPGRTG 388
C + + CLC GW G C N C S + C G TC L + Y C C G G
Sbjct: 733 N-CTGGLSGYKCLCDAGWVGINCEVDKNECLS--NPCQNGGTCDNLVNGYRCTCKKGFKG 789
Query: 389 KFCEK--DESLSDISFSGRRSYISLPSSELHLII 420
C+ DE S+ + + + H ++
Sbjct: 790 YNCQVNIDECASNPCLNQGTCFDDISGYTCHCVL 823
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 327 HGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDCPPGR 386
H G C + +++C+C G+ G +C+ + + C S+ C C+ L + Y+C+C PG
Sbjct: 580 HHGQCQDGIDSYTCICNPGYMGAICSDQIDECYSSP--CLNDGRCIDLVNGYQCNCQPGT 637
Query: 387 TGKFCE 392
+G CE
Sbjct: 638 SGVNCE 643
Score = 40.4 bits (93), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 13/114 (11%)
Query: 298 GINLYKTRAAEGRGVGQCGTS--QCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRY 355
GIN Y + G +C +C ++ C G C+N F C+C +G P C S+
Sbjct: 662 GINRYSCVCSPGFTGQRCNIDIDECASNPCRKGATCINGVNGFRCICPEGPHHPSCYSQV 721
Query: 356 NLCDST---RHNCSFGATCVPLTHSYECDCPPGRTGKFCE--KDESLSDISFSG 404
N C S NC+ G + Y+C C G G CE K+E LS+ +G
Sbjct: 722 NECLSNPCIHGNCTGGLS------GYKCLCDAGWVGINCEVDKNECLSNPCQNG 769
Score = 40.0 bits (92), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 337 TFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCEKD 394
+++CLCA GW G C + C S C C SY C+CPPG +G CE+D
Sbjct: 856 SYTCLCAPGWQGQRCTIDIDECISKP--CMNHGLCHNTQGSYMCECPPGFSGMDCEED 911
Score = 39.7 bits (91), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 32/68 (47%)
Query: 325 CSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDCPP 384
C +GG CM+ +SC C G+ G C N C S + C+ LT+ Y C C
Sbjct: 1235 CLNGGQCMDRIGGYSCRCLPGFAGERCEGDINECLSNPCSSEGSLDCIQLTNDYLCVCRS 1294
Query: 385 GRTGKFCE 392
TG+ CE
Sbjct: 1295 AFTGRHCE 1302
Score = 38.5 bits (88), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 39/97 (40%), Gaps = 5/97 (5%)
Query: 312 VGQCGTSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATC 371
V Q C + C +G C++H + C CA G+ G LC + CD C G C
Sbjct: 528 VCQIDIDDCSSTPCLNGAKCIDHPNGYECQCATGFTGVLCEENIDNCDPDP--CHHG-QC 584
Query: 372 VPLTHSYECDCPPGRTGKFCEK--DESLSDISFSGRR 406
SY C C PG G C DE S + R
Sbjct: 585 QDGIDSYTCICNPGYMGAICSDQIDECYSSPCLNDGR 621
Score = 38.1 bits (87), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Query: 325 CSHGGAC-MNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDCP 383
C +GG C M T+ C C G+ G C + C S H C+ G+TC + + + C C
Sbjct: 115 CLNGGTCHMLSRDTYECTCQVGFTGKEC-QWTDACLS--HPCANGSTCTTVANQFSCKCL 171
Query: 384 PGRTGKFCEKDESLSDI 400
G TG+ CE D + DI
Sbjct: 172 TGFTGQKCETDVNECDI 188
Score = 37.4 bits (85), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 9/95 (9%)
Query: 312 VGQCGTSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATC 371
+ +C + C NH G C N ++ C C G+ G C + D + C G +C
Sbjct: 874 IDECISKPCMNH-----GLCHNTQGSYMCECPPGFSGMDCEEDID--DCLANPCQNGGSC 926
Query: 372 VPLTHSYECDCPPGRTGKFCEKD--ESLSDISFSG 404
+ +++ C C PG TG C+ D E LS+ +G
Sbjct: 927 MDGVNTFSCLCLPGFTGDKCQTDMNECLSEPCKNG 961
Score = 36.6 bits (83), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 7/110 (6%)
Query: 299 INLYKTRAAEGRGVGQCGTS--QCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYN 356
+N Y+ G C + C ++ C HG CM+ +SC+C+ G+ G C +
Sbjct: 626 VNGYQCNCQPGTSGVNCEINFDDCASNPCIHG-ICMDGINRYSCVCSPGFTGQRCNIDID 684
Query: 357 LCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFC--EKDESLSDISFSG 404
C S + C GATC+ + + C CP G C + +E LS+ G
Sbjct: 685 ECAS--NPCRKGATCINGVNGFRCICPEGPHHPSCYSQVNECLSNPCIHG 732
>sp|P10079|FBP1_STRPU Fibropellin-1 OS=Strongylocentrotus purpuratus GN=EGF1 PE=1 SV=2
Length = 1064
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Query: 298 GINLYKTRAAEGRGVGQC--GTSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRY 355
GIN Y G C +C + C +GG C++ + C+CA GW GP CA
Sbjct: 308 GINGYTCSCPLGFSGDNCENNDDECSSIPCLNGGTCVDLVNAYMCVCAPGWTGPTCADNI 367
Query: 356 NLCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCEKD 394
+ C S C G C+ + Y CDC PG TG CE D
Sbjct: 368 DECASAP--CQNGGVCIDGVNGYMCDCQPGYTGTHCETD 404
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 50/111 (45%), Gaps = 6/111 (5%)
Query: 298 GINLYKTRAAEGRGVGQCGTS--QCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRY 355
G+N Y A G C T +C + C +GGAC+ ++C C G+ G +C +
Sbjct: 726 GVNGYVCNCAPGYTGDNCETEIDECASMPCLNGGACIEMVNGYTCQCVAGYTGVICETDI 785
Query: 356 NLCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCEK--DESLSDISFSG 404
+ C S C G C + Y C C PG TG CE DE SD +G
Sbjct: 786 DECASAP--CQNGGVCTDTINGYICACVPGFTGSNCETNIDECASDPCLNG 834
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 54/122 (44%), Gaps = 6/122 (4%)
Query: 299 INLYKTRAAEGRGVGQCGTS--QCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYN 356
+N Y A+ V C T +C + C +GGACM+ F C C GW G C +
Sbjct: 575 VNGYVCVCAQDTSVSTCETDRDECASAPCLNGGACMDVVNGFVCTCLPGWEGTNCEINTD 634
Query: 357 LCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFC--EKDESLSDISFSGRRSYISLPSS 414
C S+ C G CV +SY C C PG TG C E DE S +G + + S
Sbjct: 635 ECASSP--CMNGGLCVDQVNSYVCFCLPGFTGIHCGTEIDECASSPCLNGGQCIDRVDSY 692
Query: 415 EL 416
E
Sbjct: 693 EC 694
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 315 CGTS--QCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCV 372
CGT +C + C +GG C++ ++ C+CA G+ C + C S C G CV
Sbjct: 667 CGTEIDECASSPCLNGGQCIDRVDSYECVCAAGYTAVRCQINIDECASAP--CQNGGVCV 724
Query: 373 PLTHSYECDCPPGRTGKFCEK--DESLS 398
+ Y C+C PG TG CE DE S
Sbjct: 725 DGVNGYVCNCAPGYTGDNCETEIDECAS 752
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 62/157 (39%), Gaps = 19/157 (12%)
Query: 299 INLYKTRAAEGRGVGQCGTS--QCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYN 356
IN Y G C T+ +C + C +GG C++ F C C + G C +
Sbjct: 803 INGYICACVPGFTGSNCETNIDECASDPCLNGGICVDGVNGFVCQCPPNYSGTYCEISLD 862
Query: 357 LCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCEKDESLSDISFSGRRSYISLPSSEL 416
C S C GATCV + Y C+C PG G+ CE D SLP
Sbjct: 863 ACRSMP--CQNGATCVNVGADYVCECVPGYAGQNCEID----------INECASLPCQNG 910
Query: 417 HLIINESLSDISFSGRRSYISLPSSELHLHEACIDLE 453
L I + ++ + R YI + E+ DLE
Sbjct: 911 GLCI-DGIAGYTCQCRLGYIGVNCEEVGF----CDLE 942
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 4/98 (4%)
Query: 299 INLYKTRAAEGRGVGQC--GTSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYN 356
++ Y+ A G +C +C + C +GG C++ + C CA G+ G C + +
Sbjct: 689 VDSYECVCAAGYTAVRCQINIDECASAPCQNGGVCVDGVNGYVCNCAPGYTGDNCETEID 748
Query: 357 LCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCEKD 394
C S C G C+ + + Y C C G TG CE D
Sbjct: 749 ECASMP--CLNGGACIEMVNGYTCQCVAGYTGVICETD 784
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 318 SQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHS 377
++C + C +GG C + + C CA G+ G C + + C S C GATC +
Sbjct: 482 NECASMPCLNGGVCTDLVNGYICTCAAGFEGTNCETDTDECAS--FPCQNGATCTDQVNG 539
Query: 378 YECDCPPGRTGKFCEKD 394
Y C C PG TG CE D
Sbjct: 540 YVCTCVPGYTGVLCETD 556
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 44/99 (44%), Gaps = 4/99 (4%)
Query: 298 GINLYKTRAAEGRGVGQCGTS--QCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRY 355
G+N Y G C T +C C +GG C++ + C+CA G+ G C +
Sbjct: 384 GVNGYMCDCQPGYTGTHCETDIDECARPPCQNGGDCVDGVNGYVCICAPGFDGLNCENNI 443
Query: 356 NLCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCEKD 394
+ C S C GA CV + + C C G TG CE D
Sbjct: 444 DECAS--RPCQNGAVCVDGVNGFVCTCSAGYTGVLCETD 480
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 42/99 (42%), Gaps = 4/99 (4%)
Query: 298 GINLYKTRAAEGRGVGQC--GTSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRY 355
G+N Y A G C +C + C +G C++ F C C+ G+ G LC +
Sbjct: 422 GVNGYVCICAPGFDGLNCENNIDECASRPCQNGAVCVDGVNGFVCTCSAGYTGVLCETDI 481
Query: 356 NLCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCEKD 394
N C S C G C L + Y C C G G CE D
Sbjct: 482 NECASMP--CLNGGVCTDLVNGYICTCAAGFEGTNCETD 518
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 46/106 (43%), Gaps = 5/106 (4%)
Query: 298 GINLYKTRAAEGRGVGQC--GTSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRY 355
G+N Y G +C ++C + C +GG C++ F C C G+ G C
Sbjct: 232 GVNGYVCNCVPGFDGDECENNINECASSPCLNGGICVDGVNMFECTCLAGFTGVRCEVNI 291
Query: 356 NLCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCE-KDESLSDI 400
+ C S C G C+ + Y C CP G +G CE D+ S I
Sbjct: 292 DECASAP--CQNGGICIDGINGYTCSCPLGFSGDNCENNDDECSSI 335
Score = 40.0 bits (92), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 319 QCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSY 378
+C + C +GGAC++ + C C G+ G C + N C S+ C G CV + +
Sbjct: 217 ECASDPCQNGGACVDGVNGYVCNCVPGFDGDECENNINECASSP--CLNGGICVDGVNMF 274
Query: 379 ECDCPPGRTGKFCE 392
EC C G TG CE
Sbjct: 275 ECTCLAGFTGVRCE 288
Score = 39.3 bits (90), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 44/104 (42%), Gaps = 6/104 (5%)
Query: 299 INLYKTRAAEGRGVGQCGTS--QCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYN 356
+N Y A G C + +C + C +GG C++ + C C G+ G C + +
Sbjct: 347 VNAYMCVCAPGWTGPTCADNIDECASAPCQNGGVCIDGVNGYMCDCQPGYTGTHCETDID 406
Query: 357 LCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCEK--DESLS 398
C R C G CV + Y C C PG G CE DE S
Sbjct: 407 EC--ARPPCQNGGDCVDGVNGYVCICAPGFDGLNCENNIDECAS 448
Score = 38.1 bits (87), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 33/86 (38%), Gaps = 13/86 (15%)
Query: 359 DSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCE--KDESLSD------ISFSGRRSYI- 409
D + C GA C L + Y C CPPG TG+ CE DE SD G Y+
Sbjct: 179 DCDPNLCQNGAACTDLVNDYACTCPPGFTGRNCEIDIDECASDPCQNGGACVDGVNGYVC 238
Query: 410 ----SLPSSELHLIINESLSDISFSG 431
E INE S +G
Sbjct: 239 NCVPGFDGDECENNINECASSPCLNG 264
Score = 37.4 bits (85), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Query: 319 QCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSY 378
C + C +G AC + ++C C G+ G C + C S C G CV + Y
Sbjct: 179 DCDPNLCQNGAACTDLVNDYACTCPPGFTGRNCEIDIDECASDP--CQNGGACVDGVNGY 236
Query: 379 ECDCPPGRTGKFCEKD 394
C+C PG G CE +
Sbjct: 237 VCNCVPGFDGDECENN 252
Score = 35.4 bits (80), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
Query: 317 TSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTH 376
T +C + C +G C + + C C G+ G LC + N C S C G TC +
Sbjct: 519 TDECASFPCQNGATCTDQVNGYVCTCVPGYTGVLCETDINECAS--FPCLNGGTCNDQVN 576
Query: 377 SYECDCPPGRTGKFCEKD 394
Y C C + CE D
Sbjct: 577 GYVCVCAQDTSVSTCETD 594
Score = 33.1 bits (74), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 4/89 (4%)
Query: 318 SQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHS 377
++C + C +GG C + + C+CA C + + C S C G C+ + +
Sbjct: 558 NECASFPCLNGGTCNDQVNGYVCVCAQDTSVSTCETDRDECASAP--CLNGGACMDVVNG 615
Query: 378 YECDCPPGRTGKFCE--KDESLSDISFSG 404
+ C C PG G CE DE S +G
Sbjct: 616 FVCTCLPGWEGTNCEINTDECASSPCMNG 644
>sp|Q8R508|FAT3_RAT Protocadherin Fat 3 OS=Rattus norvegicus GN=Fat3 PE=1 SV=1
Length = 4555
Score = 58.9 bits (141), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 318 SQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHS 377
+ C + C +GG+C G TF C C G G C + C+ R C G +CV L S
Sbjct: 4061 TACFPNPCRNGGSCDPIGNTFICSCKAGLTGVTCEDDVDECE--REECENGGSCVNLFGS 4118
Query: 378 YECDCPPGRTGKFC 391
+ C+C PG G++C
Sbjct: 4119 FFCNCTPGYVGQYC 4132
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 50/120 (41%), Gaps = 9/120 (7%)
Query: 282 GFSGCIFDVELSAGNVGINLYKTRAAEGRGVGQCG------TSQCHNHTCSHGGACMN-H 334
GF GC+ V L+ + + ++ AE G+ + C C HGG+C
Sbjct: 3980 GFQGCLDSVVLNHNELPLQNKRSSFAEVVGLTELKLGCVLYPDACQRSPCLHGGSCSGLP 4039
Query: 335 GATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCEKD 394
+ C C + G C S C + C G +C P+ +++ C C G TG CE D
Sbjct: 4040 SGGYQCSCLSQFTGTNCESEITAC--FPNPCRNGGSCDPIGNTFICSCKAGLTGVTCEDD 4097
Score = 37.0 bits (84), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 319 QCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASR 354
+C C +GG+C+N +F C C G+ G C R
Sbjct: 4100 ECEREECENGGSCVNLFGSFFCNCTPGYVGQYCGLR 4135
>sp|Q4VBE4|EGFLA_MOUSE Pikachurin OS=Mus musculus GN=Egflam PE=1 SV=1
Length = 1017
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 77/160 (48%), Gaps = 12/160 (7%)
Query: 222 YTVRVGKNGQQCWLMVDNMGNVTSKSPGRLTQLNTKPMLYLGGHFSKNFSILPHDLPLHS 281
+TV + ++G L ++N VT +S G+ +++ + LYLGG S + L +
Sbjct: 472 HTVTLYRDGLNGMLQLNNGTPVTGQSQGQYSKITFRTPLYLGGAPSAYW--LVRATGTNR 529
Query: 282 GFSGCIFDVELSAGNVGINLYK-TRAAEGRGVGQCGTSQCHNHTCSHGGACMNHGA-TFS 339
GF GC+ + ++ + + + +A G VG+C + C +C HGG C A ++
Sbjct: 530 GFQGCVQSLSVNGKKIDMRPWPLGKALNGADVGECSSGICDEASCIHGGTCAAIKADSYI 589
Query: 340 CLCADGWFGPLCASRYNLC-----DSTRHNCSFGATCVPL 374
CLC G+ G C + L +S R S+ AT PL
Sbjct: 590 CLCPLGFRGRHCEDAFALTIPQFRESLR---SYAATPWPL 626
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 17/102 (16%)
Query: 222 YTVRVGKNGQQCWLMVDNMGNVTSKSPGRLTQLNTKPMLYLGGHFSKNFSILPHDLPLHS 281
+ V+ ++GQ + VD+ G T KSPG + QLN LY+GG ++ LH+
Sbjct: 926 HRVKAVRDGQSGKITVDDYGARTGKSPGLMRQLNINGALYVGGM---------KEIALHT 976
Query: 282 ------GFSGCIFDVELSAGNVGINLYKTRAAEGRGVGQCGT 317
G GCI LS + I+L + A +G+ + CG
Sbjct: 977 NRQYLRGLVGCISHFTLST-DYHISLVED-AVDGKNINTCGA 1016
Score = 37.0 bits (84), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 365 CSFGATCVPLTHSYECDCPPGRTGKFCEKD 394
C+ G +C P YECDCP G G C+K+
Sbjct: 793 CAHGGSCRPRKEGYECDCPLGFEGLNCQKE 822
Score = 36.2 bits (82), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 53/130 (40%), Gaps = 6/130 (4%)
Query: 222 YTVRVGKNGQQCWLMVDNMGNVTSKSPGRLTQLNTKPMLYLGGHFSKNFSILPHDLPLHS 281
+ +RV + + L VD V + G TQ+ +++GG N+ + + +
Sbjct: 696 HDLRVSRTAKNGILQVDKQKVVEGMAEGGFTQIKCNTDIFIGG--VPNYDDVKKNSGILH 753
Query: 282 GFSGCIFDVELSAGNVGINLYKTRAAEGRGVGQCGTSQCHNHTCSHGGACMNHGATFSCL 341
FSG I + L+ + + K G V + C C+HGG+C + C
Sbjct: 754 PFSGSIQKIILNDRTIHV---KHDFTSGVNV-ENAAHPCVGAPCAHGGSCRPRKEGYECD 809
Query: 342 CADGWFGPLC 351
C G+ G C
Sbjct: 810 CPLGFEGLNC 819
>sp|Q6V0I7|FAT4_HUMAN Protocadherin Fat 4 OS=Homo sapiens GN=FAT4 PE=1 SV=2
Length = 4981
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 52/112 (46%), Gaps = 13/112 (11%)
Query: 302 YKTRAAEGRGVGQCGTSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDST 361
+ RA E R + +C S C N G C N +F+C+C G+ G +C S N C+
Sbjct: 3892 FTGRACE-RDINECLQSPCKN-----GAICQNFPGSFNCVCKTGYTGKMCESSVNYCEC- 3944
Query: 362 RHNCSFGATCVPLTHSYECDCPPGRTGKFCEKDESLSDISFSGRRSYISLPS 413
+ C G +C SY C CP G GK CE L+ F SY+ PS
Sbjct: 3945 -NPCFNGGSCQSGVDSYYCHCPFGVFGKHCE----LNSYGFE-ELSYMEFPS 3990
Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Query: 312 VGQCGTSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATC 371
+ +C S CH+ GG C N FSC C DG+ G C N C + C GA C
Sbjct: 3863 IDECLPSPCHS-----GGTCHNLVGGFSCSCPDGFTGRACERDINEC--LQSPCKNGAIC 3915
Query: 372 VPLTHSYECDCPPGRTGKFCE 392
S+ C C G TGK CE
Sbjct: 3916 QNFPGSFNCVCKTGYTGKMCE 3936
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 39/108 (36%), Gaps = 24/108 (22%)
Query: 309 GRGVGQCGTSQCHNHTCSHGGACMNHGAT----------------------FSCLCADGW 346
G V C + C +GG+C+ A F C C G+
Sbjct: 3795 GVKVESVDHDSCVHGPCQNGGSCLRRLAVSSVLKSRESLPVIIVANEPLQPFLCKCLPGY 3854
Query: 347 FGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCEKD 394
G C + C + C G TC L + C CP G TG+ CE+D
Sbjct: 3855 AGSWCEIDIDECLPSP--CHSGGTCHNLVGGFSCSCPDGFTGRACERD 3900
Score = 38.5 bits (88), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 66/179 (36%), Gaps = 28/179 (15%)
Query: 222 YTVRVGKNGQQCWLMVDNMGNVTSKSP----GRLTQLNTKPMLYLGGHFSKNFSILP--- 274
+T +GKNG L VD + N P G L L + LGG I P
Sbjct: 4305 HTFLIGKNGTATVLSVDRIYNRDIIHPTQDFGGLDVL----TISLGG-------IPPNQA 4353
Query: 275 HDLPLHSGFSGCIFDVELSAGNVGINLYKTRAAEGRGVGQCGTSQCHNHTCSHGGACMNH 334
H +GF GCI + ++ + + A+ + T C C ++
Sbjct: 4354 HRDAQTAGFDGCIASMWYGGESLPFSGKHSLASISK------TDPSVKIGCRGPNICASN 4407
Query: 335 GATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHS-YECDCPPGRTGKFCE 392
LC + W+ C D H C G +C P HS + C CP TG+ CE
Sbjct: 4408 PCWGDLLCINQWYAYRCVPP---GDCASHPCQNGGSCEPGLHSGFTCSCPDSHTGRTCE 4463
Score = 37.4 bits (85), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 19/98 (19%)
Query: 257 KPMLYLGGHFSKNFSILPHDLPLHSGFSGCIFDVELSAGNVGINLYKTRAAEGRGV-GQC 315
+P+L GH HD F GCI + ++ G L ++A +G+ QC
Sbjct: 4116 EPILQRRGHVES------HD------FVGCIMEFAVN----GRPLEPSQALAAQGILDQC 4159
Query: 316 G--TSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLC 351
C C HGG CM++ + C C +G G C
Sbjct: 4160 PRLEGACTRSPCQHGGTCMDYWSWQQCHCKEGLTGKYC 4197
Score = 35.0 bits (79), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Query: 361 TRHNCSFGATCVPLTHSYECDCPPGRTGKFCEK----DESLSDISFSGRRSY 408
TR C G TC+ +C C G TGK+CEK D +LS + GR Y
Sbjct: 4167 TRSPCQHGGTCMDYWSWQQCHCKEGLTGKYCEKSVTPDTALS-LEGKGRLDY 4217
>sp|P24014|SLIT_DROME Protein slit OS=Drosophila melanogaster GN=sli PE=1 SV=2
Length = 1504
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 325 CSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDCPP 384
C++G CM+H +SC C G+ G C N+ D H C G TCV + Y+C CP
Sbjct: 1059 CANGAKCMDHFTHYSCDCQAGFHGTNCTD--NIDDCQNHMCQNGGTCVDGINDYQCRCPD 1116
Query: 385 GRTGKFCE 392
TGK+CE
Sbjct: 1117 DYTGKYCE 1124
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 44/102 (43%), Gaps = 14/102 (13%)
Query: 320 CHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCD--------STRHNCSFGATC 371
C NH C +GG C++ + C C D + G C +N+ H C G
Sbjct: 1092 CQNHMCQNGGTCVDGINDYQCRCPDDYTGKYCEG-HNMISMMYPQTSPCQNHECKHGVCF 1150
Query: 372 VPLTH--SYECDCPPGRTGKFCEKDESLSDISFSGRRSYISL 411
P Y C C PG TGK+C E L+ ISF S++ L
Sbjct: 1151 QPNAQGSDYLCRCHPGYTGKWC---EYLTSISFVHNNSFVEL 1189
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 320 CHNHTCSHGGAC-MNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSY 378
C+ + C + C + FSC CA G+ G C + + C C ATC+ SY
Sbjct: 974 CYGNPCRNNATCTVLEEGRFSCQCAPGYTGARCETNIDDCLG-EIKCQNNATCIDGVESY 1032
Query: 379 ECDCPPGRTGKFCE 392
+C+C PG +G+FC+
Sbjct: 1033 KCECQPGFSGEFCD 1046
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 50/125 (40%), Gaps = 15/125 (12%)
Query: 282 GFSG--CIFDVELSAGN-VGINLYKTRAAEGRGVGQCGT----SQCHNH--------TCS 326
G+ G C F ++ GN N T EGR QC ++C + C
Sbjct: 961 GYHGKHCEFMIDACYGNPCRNNATCTVLEEGRFSCQCAPGYTGARCETNIDDCLGEIKCQ 1020
Query: 327 HGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDCPPGR 386
+ C++ ++ C C G+ G C ++ C + C+ GA C+ Y CDC G
Sbjct: 1021 NNATCIDGVESYKCECQPGFSGEFCDTKIQFCSPEFNPCANGAKCMDHFTHYSCDCQAGF 1080
Query: 387 TGKFC 391
G C
Sbjct: 1081 HGTNC 1085
Score = 36.2 bits (82), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 35/86 (40%), Gaps = 6/86 (6%)
Query: 320 CHNHTCSHGGACMN-HGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHS- 377
C C + C+ + CLC G+ G C + C + C ATC L
Sbjct: 935 CFEQPCQNQAQCVALPQREYQCLCQPGYHGKHCEFMIDACYG--NPCRNNATCTVLEEGR 992
Query: 378 YECDCPPGRTGKFCEK--DESLSDIS 401
+ C C PG TG CE D+ L +I
Sbjct: 993 FSCQCAPGYTGARCETNIDDCLGEIK 1018
>sp|Q9QYE5|JAG2_MOUSE Protein jagged-2 OS=Mus musculus GN=Jag2 PE=2 SV=2
Length = 1247
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 317 TSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTH 376
T+ C+ C +GG C++ F C CA G+ GP C R N+ + C++GATCV +
Sbjct: 790 TNDCNPLPCYNGGICVDGVNWFRCECAPGFAGPDC--RINIDECQSSPCAYGATCVDEIN 847
Query: 377 SYECDCPPGRTGKFCEK 393
Y C CPPGR+G C++
Sbjct: 848 GYRCSCPPGRSGPRCQE 864
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 320 CHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYE 379
C ++ C++GG+C + F C C GW GP CA + C S + C+ G TCV +E
Sbjct: 351 CASNPCANGGSCHEVPSGFECHCPSGWNGPTCALDIDECAS--NPCAAGGTCVDQVDGFE 408
Query: 380 CDCPPGRTGKFCEKD 394
C CP G C+ D
Sbjct: 409 CICPEQWVGATCQLD 423
Score = 48.9 bits (115), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 319 QCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSY 378
QC +TCS+GG C + G TF C C GW G C N + C G TCV S+
Sbjct: 715 QCDAYTCSNGGTCYDSGDTFRCACPPGWKGSTCTIAKNS-SCVPNPCVNGGTCVGSGDSF 773
Query: 379 ECDCPPGRTGKFC 391
C C G G+ C
Sbjct: 774 SCICRDGWEGRTC 786
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 318 SQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHS 377
+ C C G C + F C C DGW G C SR CD+ + CS G TC +
Sbjct: 676 NDCLPDPCHSRGRCYDLVNDFYCACDDGWKGKTCHSREFQCDA--YTCSNGGTCYDSGDT 733
Query: 378 YECDCPPGRTGKFC 391
+ C CPPG G C
Sbjct: 734 FRCACPPGWKGSTC 747
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 318 SQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHS 377
+ CH C HGG C + + C+C G+ G C Y+ C S+ C G C L
Sbjct: 463 NDCHGQ-CQHGGTCKDLVNGYQCVCPRGFGGRHCELEYDKCASSP--CRRGGICEDLVDG 519
Query: 378 YECDCPPGRTGKFCEKDESLSDIS--FSGRRSY 408
+ C CP G +G CE D L + S +G R Y
Sbjct: 520 FRCHCPRGLSGLHCEVDMDLCEPSPCLNGARCY 552
Score = 42.0 bits (97), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 319 QCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSY 378
+C ++ C+ GG C++ F C+C + W G C N C+ C +C L Y
Sbjct: 388 ECASNPCAAGGTCVDQVDGFECICPEQWVGATCQLDANECEG--KPCLNAFSCKNLIGGY 445
Query: 379 ECDCPPGRTGKFCE 392
CDC PG G C+
Sbjct: 446 YCDCLPGWKGINCQ 459
Score = 41.6 bits (96), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 323 HTCSHGGACMN-HGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECD 381
H C +GG C+N + C C DG+ G C + C S + C+ G +C + +EC
Sbjct: 315 HPCVNGGTCINAEPDQYLCACPDGYLGKNCERAEHACAS--NPCANGGSCHEVPSGFECH 372
Query: 382 CPPGRTGKFC--EKDESLSDISFSG 404
CP G G C + DE S+ +G
Sbjct: 373 CPSGWNGPTCALDIDECASNPCAAG 397
Score = 40.4 bits (93), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 32/81 (39%), Gaps = 2/81 (2%)
Query: 319 QCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSY 378
C C +GG C++ +F C C GW G LC N D C C L + +
Sbjct: 639 DCMGQPCRNGGTCIDEVDSFRCFCPSGWEGELCDINPN--DCLPDPCHSRGRCYDLVNDF 696
Query: 379 ECDCPPGRTGKFCEKDESLSD 399
C C G GK C E D
Sbjct: 697 YCACDDGWKGKTCHSREFQCD 717
Score = 39.7 bits (91), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 51/132 (38%), Gaps = 16/132 (12%)
Query: 317 TSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTH 376
++C C + +C N + C C GW G C N C C G TC L +
Sbjct: 424 ANECEGKPCLNAFSCKNLIGGYYCDCLPGWKGINCQININDCHG---QCQHGGTCKDLVN 480
Query: 377 SYECDCPPGRTGKFCE-----------KDESLSDISFSGRRSYISLPSSELHLIINESLS 425
Y+C CP G G+ CE + + + G R + S LH ++ L
Sbjct: 481 GYQCVCPRGFGGRHCELEYDKCASSPCRRGGICEDLVDGFRCHCPRGLSGLHCEVDMDLC 540
Query: 426 DIS--FSGRRSY 435
+ S +G R Y
Sbjct: 541 EPSPCLNGARCY 552
Score = 39.7 bits (91), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 43/105 (40%), Gaps = 10/105 (9%)
Query: 306 AAEGRGVGQCGTSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNC 365
+ RGV G H H S G FSC+C G+ G C N+ D C
Sbjct: 594 GSRARGVAPSGICGPHGHCVSL------PGGNFSCICDSGFTGTYC--HENIDDCMGQPC 645
Query: 366 SFGATCVPLTHSYECDCPPGRTGKFCE--KDESLSDISFSGRRSY 408
G TC+ S+ C CP G G+ C+ ++ L D S R Y
Sbjct: 646 RNGGTCIDEVDSFRCFCPSGWEGELCDINPNDCLPDPCHSRGRCY 690
Score = 35.8 bits (81), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 338 FSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLT-HSYECDCPPGRTGKFCEKDE 395
+ C C W G LC N C S H C G TC+ Y C CP G GK CE+ E
Sbjct: 291 WHCDCETNWGGLLCDKDLNYCGS-HHPCVNGGTCINAEPDQYLCACPDGYLGKNCERAE 348
Score = 33.1 bits (74), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 38/95 (40%), Gaps = 4/95 (4%)
Query: 299 INLYKTRAAEGRGVGQCGTS--QCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYN 356
+N Y+ G G C +C + C GG C + F C C G G C +
Sbjct: 479 VNGYQCVCPRGFGGRHCELEYDKCASSPCRRGGICEDLVDGFRCHCPRGLSGLHCEVDMD 538
Query: 357 LCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFC 391
LC+ + C GA C L Y C CP GK C
Sbjct: 539 LCEPSP--CLNGARCYNLEGDYYCACPEDFGGKNC 571
>sp|P97607|JAG2_RAT Protein jagged-2 (Fragment) OS=Rattus norvegicus GN=Jag2 PE=2 SV=1
Length = 1202
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 317 TSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTH 376
T+ C+ C +GG C++ F C CA G+ GP C R N+ + C++GATCV +
Sbjct: 745 TNDCNPLPCYNGGICVDGVNWFRCECAPGFAGPDC--RINIDECQSSPCAYGATCVDEIN 802
Query: 377 SYECDCPPGRTGKFCEK 393
Y C CPPGR+G C++
Sbjct: 803 GYRCSCPPGRSGPRCQE 819
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 320 CHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYE 379
C ++ C++GG+C + F C C GW GP CA + C S + C+ G TCV +E
Sbjct: 305 CASNPCANGGSCHEVLSGFECHCPSGWSGPTCALDIDECAS--NPCAAGGTCVDQVDGFE 362
Query: 380 CDCPPGRTGKFCEKD 394
C CP G C+ D
Sbjct: 363 CICPEQWVGATCQLD 377
Score = 48.9 bits (115), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 319 QCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSY 378
QC +TCS+GG C + G TF C C GW G C N + C G TCV S+
Sbjct: 670 QCDAYTCSNGGTCYDSGDTFRCACPPGWKGSTCTIAKNS-SCVPNPCVNGGTCVGSGDSF 728
Query: 379 ECDCPPGRTGKFC 391
C C G G+ C
Sbjct: 729 SCICRDGWEGRTC 741
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 66/190 (34%), Gaps = 28/190 (14%)
Query: 318 SQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHS 377
+ CH C HGG C + + C+C G+ G C Y C S+ C G C L
Sbjct: 417 NDCHGQ-CQHGGTCKDLVNGYQCVCPRGFGGRHCELEYYKCASSP--CRRGGICEDLVDG 473
Query: 378 YECDCPPGRTGKFCEKDESL---SDISFSGRRSY------------------ISLPSSEL 416
+ C CP G +G CE D L + +G R Y S+P
Sbjct: 474 FRCHCPRGLSGPLCEVDVDLWCEPNPCLNGARCYNLEDDYYCACPEDFGGKNCSVPRETC 533
Query: 417 HLIINESLSDISF-SGRRSYISLPSSELHLHEACIDL---EIRPTKDKGLLMYFGHPQKN 472
+ F +G R++ + PS H C+ L D G + H +
Sbjct: 534 PGGACRVIDGCGFEAGSRAHGAAPSGVCGPHGHCVSLPGGNFSCICDSGFTGTYCHENID 593
Query: 473 SMMTLSLQGG 482
M + G
Sbjct: 594 DCMGQPCRNG 603
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 318 SQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHS 377
+ C C G C + F C+C DGW C SR CD+ + CS G TC +
Sbjct: 631 NDCLPDPCHSRGRCYDLVNDFYCVCDDGWKDKTCHSREFQCDA--YTCSNGGTCYDSGDT 688
Query: 378 YECDCPPGRTGKFC 391
+ C CPPG G C
Sbjct: 689 FRCACPPGWKGSTC 702
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 319 QCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSY 378
+C ++ C+ GG C++ F C+C + W G C N C+ C +C L Y
Sbjct: 342 ECASNPCAAGGTCVDQVDGFECICPEQWVGATCQLDANECEGKP--CLNAFSCKNLIGGY 399
Query: 379 ECDCPPGRTGKFC 391
CDC PG G C
Sbjct: 400 YCDCLPGWKGANC 412
Score = 42.0 bits (97), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 323 HTCSHGGACMN-HGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECD 381
H C +GG C+N + C C DG+ G C + C S + C+ G +C + +EC
Sbjct: 269 HPCVNGGTCINAEPDQYLCACPDGYLGKNCERAEHACAS--NPCANGGSCHEVLSGFECH 326
Query: 382 CPPGRTGKFC--EKDESLSDISFSG 404
CP G +G C + DE S+ +G
Sbjct: 327 CPSGWSGPTCALDIDECASNPCAAG 351
Score = 40.4 bits (93), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 6/101 (5%)
Query: 335 GATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCE-- 392
G FSC+C G+ G C N+ D C G TC+ S+ C CP G G+ C+
Sbjct: 572 GGNFSCICDSGFTGTYC--HENIDDCMGQPCRNGGTCIDEVDSFACFCPSGWEGELCDIN 629
Query: 393 KDESLSDISFSGRRSYISLPSSELHLIINESLSDISFSGRR 433
++ L D S R Y + ++ + + ++ D + R
Sbjct: 630 PNDCLPDPCHSRGRCYDLV--NDFYCVCDDGWKDKTCHSRE 668
Score = 39.3 bits (90), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Query: 317 TSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLTH 376
++C C + +C N + C C GW G C N C C G TC L +
Sbjct: 378 ANECEGKPCLNAFSCKNLIGGYYCDCLPGWKGANCHININDCHG---QCQHGGTCKDLVN 434
Query: 377 SYECDCPPGRTGKFCE 392
Y+C CP G G+ CE
Sbjct: 435 GYQCVCPRGFGGRHCE 450
Score = 35.8 bits (81), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 338 FSCLCADGWFGPLCASRYNLCDSTRHNCSFGATCVPLT-HSYECDCPPGRTGKFCEKDE 395
+ C C W G LC N C S H C G TC+ Y C CP G GK CE+ E
Sbjct: 245 WHCDCETNWGGLLCDKDLNYCGS-HHPCVNGGTCINAEPDQYLCACPDGYLGKNCERAE 302
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.139 0.444
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 195,254,064
Number of Sequences: 539616
Number of extensions: 8410051
Number of successful extensions: 21311
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 221
Number of HSP's successfully gapped in prelim test: 327
Number of HSP's that attempted gapping in prelim test: 16203
Number of HSP's gapped (non-prelim): 3562
length of query: 500
length of database: 191,569,459
effective HSP length: 122
effective length of query: 378
effective length of database: 125,736,307
effective search space: 47528324046
effective search space used: 47528324046
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 63 (28.9 bits)