RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy7014
(500 letters)
>d1pz7a_ b.29.1.4 (A:) Agrin {Chicken (Gallus gallus) [TaxId: 9031]}
Length = 195
Score = 58.4 bits (140), Expect = 2e-10
Identities = 31/137 (22%), Positives = 55/137 (40%), Gaps = 11/137 (8%)
Query: 179 DFLCMSIYTSYLQPTGHMFVDTYRGPRRIFTPNTISAKSKRGGYTVRVGKNGQQCWLMVD 238
D++ ++I ++Q M D P + + I+ ++ + ++ L V
Sbjct: 70 DYIALAIVDGFVQ----MMYDLGSKPVVLRSTVPINTNHW---THIKAYRVQREGSLQVG 122
Query: 239 NMGNVTSKSPGRLTQLNTKPMLYLGGHFSKNFSILPHDLPLHSGFSGCIFDVELSAGNVG 298
N +T SP TQL+T L+LGG + +GF GCI DV +
Sbjct: 123 NEAPITGSSPLGATQLDTDGALWLGG-MERLSVAHKLPKAYSTGFIGCIRDVIVD--RQE 179
Query: 299 INLYKTRAAEGRGVGQC 315
++L + A + C
Sbjct: 180 LHLVE-DALNNPTILHC 195
Score = 33.4 bits (75), Expect = 0.042
Identities = 16/92 (17%), Positives = 39/92 (42%), Gaps = 14/92 (15%)
Query: 400 ISFSGRRSYISLPSSELHLIINESLSDISFSGRRSYISLPSSELHLHEACIDLEIRPTKD 459
I+F GR +Y+ ++ ++ S SE L +L I+
Sbjct: 9 IAFDGR-TYMEYHNA------------VTKSPDALDYPAEPSEKALQSNHFELSIKTEAT 55
Query: 460 KGLLMYFG-HPQKNSMMTLSLQGGVLELRVLM 490
+GL+++ G +++ + L++ G +++ +
Sbjct: 56 QGLILWSGKGLERSDYIALAIVDGFVQMMYDL 87
>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein
1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 42
Score = 49.7 bits (119), Expect = 5e-09
Identities = 13/39 (33%), Positives = 17/39 (43%)
Query: 356 NLCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCEKD 394
+ C + C C+ S+EC C G TG CE D
Sbjct: 4 DECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEID 42
Score = 41.3 bits (97), Expect = 6e-06
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 319 QCHNHTCSHGGACMNHGATFSCLCADGWFGPLC 351
+ C H G C+N +F C C G+ GP C
Sbjct: 7 SLGANPCEHAGKCINTLGSFECQCLQGYTGPRC 39
>d1dyka2 b.29.1.4 (A:2933-3117) Laminin alpha2 chain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 185
Score = 51.8 bits (123), Expect = 2e-08
Identities = 30/145 (20%), Positives = 49/145 (33%), Gaps = 11/145 (7%)
Query: 177 GVDFLCMSIYTSYLQPTGHMFVDTYRGPRRIFTPNTISAKSKRGG-YTVRVGKNGQQCWL 235
+D + + + L VD G I G + V K + L
Sbjct: 48 KMDGMGIEMIDEKL----MFHVDNGAGRFTAIYDAEIPGHMCNGQWHKVTAKKIKNRLEL 103
Query: 236 MVDNMGNVTSKSPGRLTQLNTKPMLYLGGHFSKNFSILPHDLPLHSGFSGCIFDVELSAG 295
+VD T +T +++GG + L + F GCI ++L+ G
Sbjct: 104 VVDGNQVDAQSPNSASTSADTNDPVFVGGFPG---GLNQFGLTTNIRFRGCIRSLKLTKG 160
Query: 296 NVG-INLYKTRAAEGRGV--GQCGT 317
+ + +A E RGV C T
Sbjct: 161 TGKPLEVNFAKALELRGVQPVSCPT 185
Score = 32.9 bits (74), Expect = 0.053
Identities = 12/60 (20%), Positives = 21/60 (35%), Gaps = 2/60 (3%)
Query: 429 FSGRRSYISLPSSELHLHEACIDLEIRPTKDKGLLMYFGHPQKNSMMTLSLQGGVLELRV 488
F G + + ++ E R T+ G+L+ QK M + + L V
Sbjct: 8 FDGT-GFAKAVGGFKVGLDLLVEFEFRTTRPTGVLLG-VSSQKMDGMGIEMIDEKLMFHV 65
>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein
1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 39
Score = 45.8 bits (109), Expect = 1e-07
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Query: 356 NLCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCEKD 394
N C S + C ATC+ ++C C PG G CE +
Sbjct: 2 NECVS--NPCQNDATCLDQIGEFQCICMPGYEGVHCEVN 38
Score = 42.7 bits (101), Expect = 1e-06
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 320 CHNHTCSHGGACMNHGATFSCLCADGWFGPLC 351
C ++ C + C++ F C+C G+ G C
Sbjct: 4 CVSNPCQNDATCLDQIGEFQCICMPGYEGVHC 35
>d1dyka1 b.29.1.4 (A:2744-2932) Laminin alpha2 chain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 189
Score = 49.1 bits (116), Expect = 2e-07
Identities = 24/137 (17%), Positives = 49/137 (35%), Gaps = 14/137 (10%)
Query: 179 DFLCMSIYTSYLQPTGHMFVDTYRGPRRIFTPNTISAKSKRGGYTVRVGKNGQQCWLMVD 238
DF + + + D G P I+ + +++ + Q+ L VD
Sbjct: 65 DFATVQLRNGFPY----FSYDLGSGDTSTMIPTKINDGQW---HKIKIVRVKQEGILYVD 117
Query: 239 NMGNVTSKSPGRLTQLNTKPMLYLGGHFSKNFSILPHDLPLHSGFSGCIFDVELSAGNVG 298
+ + + SP + L+ +LY+GG P+ GC+ ++ +
Sbjct: 118 DA-SSQTISPKKADILDVVGILYVGGLPIN--YTTRRIGPVTYSLDGCVRNLHME--QAP 172
Query: 299 INLYKTRAAEGRGVGQC 315
++L + VG C
Sbjct: 173 VDL--DQPTSSFHVGTC 187
Score = 39.8 bits (92), Expect = 3e-04
Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 432 RRSYISLPSSELHL-HEACIDLEIRPTKDKGLLMYFGHPQKNSMMTLSLQGGVLELRVLM 490
R S+I++ + + + I+LE+R + GLL Y T+ L+ G
Sbjct: 23 RNSHIAIAFDDTKVKNRLTIELEVRTEAESGLLFYMARINHADFATVQLRNGFPYFSY-D 81
Query: 491 LGDRPKT 497
LG +
Sbjct: 82 LGSGDTS 88
Score = 31.0 bits (69), Expect = 0.21
Identities = 12/94 (12%), Positives = 29/94 (30%), Gaps = 8/94 (8%)
Query: 59 PDIEIGQASYSSSMSGLSSFSAYVIPANIHHCFELKFRFVPNSFDQIALLAFIGQDYQHD 118
P + G + S + + + + + ++ + LL ++ +
Sbjct: 10 PALLTGSKQFGLSRNSHIAIA--FDDTKVKNRLTIELEVRTEAES--GLLFYMARINH-- 63
Query: 119 AITDHLAVSFIKGYVVLTWNLGSGWYLVYFEHTY 152
D V G+ +++LGSG
Sbjct: 64 --ADFATVQLRNGFPYFSYDLGSGDTSTMIPTKI 95
>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo
sapiens) [TaxId: 9606]}
Length = 39
Score = 44.7 bits (106), Expect = 3e-07
Identities = 11/37 (29%), Positives = 14/37 (37%), Gaps = 2/37 (5%)
Query: 356 NLCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCE 392
+ C++ C C Y C C G GK CE
Sbjct: 1 DQCET--SPCQNQGKCKDGLGEYTCTCLEGFEGKNCE 35
Score = 42.0 bits (99), Expect = 2e-06
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 320 CHNHTCSHGGACMNHGATFSCLCADGWFGPLC 351
C C + G C + ++C C +G+ G C
Sbjct: 3 CETSPCQNQGKCKDGLGEYTCTCLEGFEGKNC 34
>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 44.7 bits (106), Expect = 3e-07
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Query: 356 NLCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCE 392
+ C+S + C G +C +SYEC CP G GK CE
Sbjct: 4 DQCES--NPCLNGGSCKDDINSYECWCPFGFEGKNCE 38
Score = 43.1 bits (102), Expect = 1e-06
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 320 CHNHTCSHGGACMNHGATFSCLCADGWFGPLC 351
C ++ C +GG+C + ++ C C G+ G C
Sbjct: 6 CESNPCLNGGSCKDDINSYECWCPFGFEGKNC 37
>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein
1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 35
Score = 44.3 bits (105), Expect = 3e-07
Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Query: 356 NLCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCE 392
+ C S C C+ + ++C+CP G TG C+
Sbjct: 1 DECAS--SPCLHNGRCLDKINEFQCECPTGFTGHLCQ 35
Score = 42.0 bits (99), Expect = 2e-06
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 320 CHNHTCSHGGACMNHGATFSCLCADGWFGPLC 351
C + C H G C++ F C C G+ G LC
Sbjct: 3 CASSPCLHNGRCLDKINEFQCECPTGFTGHLC 34
>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa)
[TaxId: 9823]}
Length = 37
Score = 43.5 bits (103), Expect = 6e-07
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
Query: 356 NLCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCE 392
+ C S C G +C SY C C P G+ CE
Sbjct: 3 DQCAS--SPCQNGGSCKDQLQSYICFCLPAFEGRNCE 37
Score = 42.0 bits (99), Expect = 2e-06
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 320 CHNHTCSHGGACMNHGATFSCLCADGWFGPLC 351
C + C +GG+C + ++ C C + G C
Sbjct: 5 CASSPCQNGGSCKDQLQSYICFCLPAFEGRNC 36
>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 39
Score = 43.6 bits (103), Expect = 7e-07
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Query: 358 CDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCEKD 394
C + +CS CV ++Y C C PG +G CE+
Sbjct: 4 CTN--TSCSGHGECVETINNYTCKCDPGFSGLKCEQI 38
Score = 43.2 bits (102), Expect = 1e-06
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 317 TSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLC 351
T+ C N +CS G C+ ++C C G+ G C
Sbjct: 1 TAACTNTSCSGHGECVETINNYTCKCDPGFSGLKC 35
>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 40
Score = 42.9 bits (101), Expect = 1e-06
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 317 TSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLC 351
T+ C + +CS G C+ ++C C G++GP C
Sbjct: 1 TASCQDMSCSKQGECLETIGNYTCSCYPGFYGPEC 35
Score = 42.1 bits (99), Expect = 3e-06
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 358 CDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCE 392
C +CS C+ +Y C C PG G CE
Sbjct: 4 CQD--MSCSKQGECLETIGNYTCSCYPGFYGPECE 36
>d1h30a1 b.29.1.4 (A:261-451) Growth-arrest-specific protein Gas6
{Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 44.4 bits (104), Expect = 7e-06
Identities = 14/114 (12%), Positives = 36/114 (31%), Gaps = 13/114 (11%)
Query: 177 GVDFLCMSIYTSYLQPTGHMFVDTYRGPRRIFTPNTISAKSKRGGYTVRVGKNGQQCWLM 236
++ +++ L+ + + R + I+ T+ V + + +
Sbjct: 82 DSTWIVLALRAGRLE----LQLRYNGVGRVTSSGPVINHGMW---QTISVEELARNLVIK 134
Query: 237 VDNMGNVTSKSPG---RLTQLNTKPMLYLGGHFSKNFSILPHDLPLHSGFSGCI 287
V+ + G + + L +GG F P++ GC+
Sbjct: 135 VNRDAVMKIAVAGDLFQPERGLYHLNLTVGGI---PFHEKDLVQPINPRLDGCM 185
Score = 38.6 bits (89), Expect = 6e-04
Identities = 29/117 (24%), Positives = 44/117 (37%), Gaps = 19/117 (16%)
Query: 380 CDCPPGRT----GKFCEKDESLSDISFSGRRSYISLPSSELHLIINESLSDISFSGRRSY 435
CD G CE L + FS +S SL FSG
Sbjct: 2 CDGRGGLKLSQDMDTCEDI--LPCVPFSVAKSVKSLYLGR------------MFSGT-PV 46
Query: 436 ISLPSSELHLHEACIDLEIRPTKDKGLLMYFGHPQKNSMMTLSLQGGVLELRVLMLG 492
I L L + + R +G+L++ G Q ++ + L+L+ G LEL++ G
Sbjct: 47 IRLRFKRLQPTRLVAEFDFRTFDPEGILLFAGGHQDSTWIVLALRAGRLELQLRYNG 103
>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like
module {Sheep (Ovis aries) [TaxId: 9940]}
Length = 42
Score = 39.4 bits (92), Expect = 2e-05
Identities = 13/42 (30%), Positives = 16/42 (38%), Gaps = 4/42 (9%)
Query: 356 NLCDSTRHNCSFGATCVPL-THSYECDCPP-GRTGKFCEKDE 395
N C + C CV Y+CDC G +G C E
Sbjct: 3 NPCCY--YPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTIPE 42
Score = 34.4 bits (79), Expect = 0.001
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 319 QCHNHTCSHGGACMNHGA-TFSCLC-ADGWFGPLC 351
C + C H G C+ G + C C G+ GP C
Sbjct: 4 PCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNC 38
>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like
module {Mouse (Mus musculus) [TaxId: 10090]}
Length = 41
Score = 38.6 bits (90), Expect = 4e-05
Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 4/42 (9%)
Query: 356 NLCDSTRHNCSFGATCVPL-THSYECDCP-PGRTGKFCEKDE 395
N C S + C C+ Y+CDC G G+ C E
Sbjct: 2 NPCCS--NPCQNRGECMSTGFDQYKCDCTRTGFYGENCTTPE 41
Score = 34.4 bits (79), Expect = 0.001
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 319 QCHNHTCSHGGACMNHGA-TFSCLC-ADGWFGPLC 351
C ++ C + G CM+ G + C C G++G C
Sbjct: 3 PCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENC 37
>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 53
Score = 38.7 bits (90), Expect = 5e-05
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Query: 315 CGTSQCHNHTCSHGGACMN--HGATFSCLCADGWFGPLC 351
G ++ C +GG CM+ +++C C G+ G C
Sbjct: 4 PGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRC 42
Score = 37.2 bits (86), Expect = 2e-04
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Query: 355 YNLCDSTRHN-CSFGATCVPL--THSYECDCPPGRTGKFCEKDE 395
Y C S+ C G C+ + SY C+C G +G C+ +
Sbjct: 3 YPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQTRD 46
>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type),
t-PA {Human (Homo sapiens) [TaxId: 9606]}
Length = 41
Score = 38.3 bits (89), Expect = 6e-05
Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 4/39 (10%)
Query: 358 CDSTRHNCSFGATCVPLTH--SYECDCPPGRTGKFCEKD 394
C C G TC + + C CP G GK CE D
Sbjct: 1 CSE--PRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEID 37
Score = 35.6 bits (82), Expect = 4e-04
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Query: 320 CHNHTCSHGGACMN--HGATFSCLCADGWFGPLC 351
C C +GG C + + F C C +G+ G C
Sbjct: 1 CSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKSC 34
>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin
IIa) {Human (Homo sapiens) [TaxId: 9606]}
Length = 48
Score = 37.9 bits (88), Expect = 9e-05
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Query: 356 NLCDSTRHNCSFGATCVPLTHSYECDCPPGRTGKFCEKD 394
+ C S C TC+ S+ CDC G G+FC+++
Sbjct: 9 HPCAS---LCCGHGTCIDGIGSFSCDCRSGWEGRFCQRE 44
Score = 35.9 bits (83), Expect = 4e-04
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 319 QCHNHTCSHGGACMNHGATFSCLCADGWFGPLC 351
C + C HG C++ +FSC C GW G C
Sbjct: 10 PCASLCCGHGT-CIDGIGSFSCDCRSGWEGRFC 41
>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo
sapiens) [TaxId: 9606]}
Length = 48
Score = 37.2 bits (86), Expect = 2e-04
Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Query: 320 CHNHTCSHGGACMNH--GATFSCLCADGWFGPLC 351
H+ C H G CM ++C C G+ G C
Sbjct: 7 SHDGYCLHDGVCMYIEALDKYACNCVVGYIGERC 40
Score = 34.5 bits (79), Expect = 0.001
Identities = 8/30 (26%), Positives = 13/30 (43%), Gaps = 2/30 (6%)
Query: 365 CSFGATCVPL--THSYECDCPPGRTGKFCE 392
C C+ + Y C+C G G+ C+
Sbjct: 12 CLHDGVCMYIEALDKYACNCVVGYIGERCQ 41
>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 63
Score = 37.3 bits (86), Expect = 2e-04
Identities = 7/44 (15%), Positives = 15/44 (34%)
Query: 315 CGTSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLC 358
+ C N +++ + + C C G+ G C +
Sbjct: 9 KEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPMK 52
Score = 36.9 bits (85), Expect = 3e-04
Identities = 11/53 (20%), Positives = 17/53 (32%), Gaps = 7/53 (13%)
Query: 356 NLCDSTRHNCSFGATCVPLTH-----SYECDCPPGRTGKFCEKDESLSDISFS 403
+ C G C + Y C C PG TG C ++ + +
Sbjct: 7 AEKEK--TFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPMKVQNQE 57
>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 40
Score = 36.4 bits (84), Expect = 3e-04
Identities = 11/31 (35%), Positives = 13/31 (41%)
Query: 358 CDSTRHNCSFGATCVPLTHSYECDCPPGRTG 388
C + RH CS A C + C C TG
Sbjct: 2 CANNRHQCSVHAECRDYATGFCCRCVANYTG 32
Score = 30.6 bits (69), Expect = 0.031
Identities = 9/32 (28%), Positives = 13/32 (40%)
Query: 317 TSQCHNHTCSHGGACMNHGATFSCLCADGWFG 348
T + H CS C ++ F C C + G
Sbjct: 1 TCANNRHQCSVHAECRDYATGFCCRCVANYTG 32
>d1d2sa_ b.29.1.4 (A:) Sex hormone-binding globulin {Human (Homo
sapiens) [TaxId: 9606]}
Length = 170
Score = 39.0 bits (90), Expect = 4e-04
Identities = 15/111 (13%), Positives = 31/111 (27%), Gaps = 14/111 (12%)
Query: 177 GVDFLCMSIYTSYLQPTGHMFVDTYRGPRRIFTPNTISAKSKRGGYTVRVGKNGQQCWLM 236
D+ + + + + + + + + V V G L
Sbjct: 51 KDDWFMLGLRDGRP----EIQLHNHWAQLTVGAGPRLD---DGRWHQVEVKMEGDSVLLE 103
Query: 237 VDNMGNVTSKSPGRLTQLNTKPMLYLGGHFSKNFSILPHDLPLHSGFSGCI 287
VD + + + + LGG ++ LPL GC+
Sbjct: 104 VDGEEVLRLRQVS----GHPIMRIALGGLLFPASNL---RLPLVPALDGCL 147
Score = 32.4 bits (73), Expect = 0.064
Identities = 9/54 (16%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Query: 434 SYISLPSSELHLHEACIDLEIRPTKDKGLLMYFGHPQKNSMMTLSLQGGVLELR 487
+ ++ +++ + E+R +G++ Y K+ L L+ G E++
Sbjct: 16 AVMTFDLTKIT--KTSSSFEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQ 67
>d2r1da1 b.29.1.4 (A:36-212) Ligand-binding domain of neurexin 1beta
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 177
Score = 38.3 bits (88), Expect = 7e-04
Identities = 22/121 (18%), Positives = 39/121 (32%), Gaps = 16/121 (13%)
Query: 194 GHMFVDTYRGPRRIFTPNTISAKSKRGGYTVRVGKNGQQCWLMVDNMGNVTSKS-PGRLT 252
+ + I N I K + VR ++G L VD+ + +LT
Sbjct: 67 IGVKFNVGTDDIAIEESNAIINDGKY--HVVRFTRSGGNATLQVDSWPVIERYPAGRQLT 124
Query: 253 QLNTKPMLYLGGHFSKNFSILPHDLPLHSGFSGCIFDVELSAGNVGINLYKTRAAEGRGV 312
N++ + +GG F G + + + V +N+ A V
Sbjct: 125 IFNSQATIIIGG------------KEQGQPFQGQLSGLYYNGLKV-LNMAAENDANIAIV 171
Query: 313 G 313
G
Sbjct: 172 G 172
>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 43
Score = 33.2 bits (76), Expect = 0.004
Identities = 10/41 (24%), Positives = 16/41 (39%), Gaps = 5/41 (12%)
Query: 356 NLCDSTRHNCSFGATCVPLTHSYECDCPPGRT----GKFCE 392
+ C C G C+ S++C CP G + C+
Sbjct: 4 DECQELPGLCQGG-KCINTFGSFQCRCPTGYYLNEDTRVCD 43
Score = 26.7 bits (59), Expect = 0.86
Identities = 8/25 (32%), Positives = 11/25 (44%), Gaps = 1/25 (4%)
Query: 322 NHTCSHGGACMNHGATFSCLCADGW 346
C G C+N +F C C G+
Sbjct: 10 PGLCQGG-KCINTFGSFQCRCPTGY 33
>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens)
[TaxId: 9606]}
Length = 53
Score = 32.2 bits (73), Expect = 0.009
Identities = 11/48 (22%), Positives = 14/48 (29%), Gaps = 5/48 (10%)
Query: 351 CASRYNLCDSTRHNCSFGATCVPLTHSYECDCPPGRT----GKFCEKD 394
CASR + C Y C C PG C+ +
Sbjct: 7 CASRSKSGE-EDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSCQAE 53
Score = 25.7 bits (56), Expect = 2.1
Identities = 5/28 (17%), Positives = 9/28 (32%)
Query: 320 CHNHTCSHGGACMNHGATFSCLCADGWF 347
+ C N+ + C C G+
Sbjct: 15 EEDPQPQCQHLCHNYVGGYFCSCRPGYE 42
>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 44
Score = 31.7 bits (72), Expect = 0.014
Identities = 9/33 (27%), Positives = 12/33 (36%), Gaps = 1/33 (3%)
Query: 356 NLCDSTRHNCSFGATCVPLTHSYECDCPPGRTG 388
+ C + C G CV +EC C G
Sbjct: 4 DECRISPDLCGRG-QCVNTPGDFECKCDEGYES 35
Score = 28.3 bits (63), Expect = 0.24
Identities = 8/33 (24%), Positives = 12/33 (36%), Gaps = 1/33 (3%)
Query: 322 NHTCSHGGACMNHGATFSCLCADGWFGPLCASR 354
C G C+N F C C +G+ +
Sbjct: 10 PDLCGRG-QCVNTPGDFECKCDEGYESGFMMMK 41
>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 42
Score = 31.3 bits (71), Expect = 0.015
Identities = 11/30 (36%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 356 NLCDSTRHNCSFGATCVPLTHSYECDCPPG 385
+ C C G C SY C+CPPG
Sbjct: 3 DECQRDPLLCR-GGVCHNTEGSYRCECPPG 31
Score = 26.3 bits (58), Expect = 1.0
Identities = 7/25 (28%), Positives = 9/25 (36%), Gaps = 1/25 (4%)
Query: 322 NHTCSHGGACMNHGATFSCLCADGW 346
C G C N ++ C C G
Sbjct: 9 PLLCRGG-VCHNTEGSYRCECPPGH 32
>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 50
Score = 31.7 bits (72), Expect = 0.016
Identities = 10/33 (30%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Query: 320 CHNHTCSHGGACM-NHGATFSCLCADGWFGPLC 351
+ H C G T SC+C +G+ G C
Sbjct: 11 QYKHYCIKGRCRFVVAEQTPSCVCDEGYIGARC 43
Score = 30.2 bits (68), Expect = 0.046
Identities = 9/41 (21%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 355 YNLCDSTRHN-CSFGATCVPLTHS-YECDCPPGRTGKFCEK 393
++ C + C G + C C G G CE+
Sbjct: 5 FSRCPKQYKHYCIKGRCRFVVAEQTPSCVCDEGYIGARCER 45
>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL)
receptor, different EGF domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 40
Score = 30.9 bits (70), Expect = 0.024
Identities = 14/40 (35%), Positives = 15/40 (37%), Gaps = 5/40 (12%)
Query: 356 NLCDSTRHNCSFGATCVPLTHSYECDCPPGRT---GKFCE 392
N C CS C L YEC CP G + CE
Sbjct: 3 NECLDNNGGCS--HVCNDLKIGYECLCPDGFQLVAQRRCE 40
Score = 29.3 bits (66), Expect = 0.069
Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 5/36 (13%)
Query: 311 GVGQCGTSQCHNHTCSHGGACMNHGATFSCLCADGW 346
G +C + N CSH C + + CLC DG+
Sbjct: 1 GTNECLDN---NGGCSHV--CNDLKIGYECLCPDGF 31
>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens)
[TaxId: 9606]}
Length = 46
Score = 30.1 bits (68), Expect = 0.042
Identities = 10/35 (28%), Positives = 12/35 (34%), Gaps = 1/35 (2%)
Query: 318 SQCHNHTCSHGGACMNHG-ATFSCLCADGWFGPLC 351
S N C HG + C C G+ G C
Sbjct: 7 SSDMNGYCLHGQCIYLVDMSQNYCRCEVGYTGVRC 41
Score = 24.0 bits (52), Expect = 7.7
Identities = 12/37 (32%), Positives = 14/37 (37%), Gaps = 2/37 (5%)
Query: 358 CDSTRHN-CSFGATCVPLTHS-YECDCPPGRTGKFCE 392
C S + C G + S C C G TG CE
Sbjct: 6 CSSDMNGYCLHGQCIYLVDMSQNYCRCEVGYTGVRCE 42
>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo
sapiens) [TaxId: 9606]}
Length = 49
Score = 30.2 bits (68), Expect = 0.045
Identities = 9/35 (25%), Positives = 12/35 (34%), Gaps = 1/35 (2%)
Query: 318 SQCHNHTCSHGGACMNHG-ATFSCLCADGWFGPLC 351
H C HG +C+C G+ G C
Sbjct: 8 PDSHTQFCFHGTCRFLVQEDKPACVCHSGYVGARC 42
Score = 28.6 bits (64), Expect = 0.17
Identities = 11/42 (26%), Positives = 14/42 (33%), Gaps = 2/42 (4%)
Query: 353 SRYNLCDSTRHN-CSFGATC-VPLTHSYECDCPPGRTGKFCE 392
S +N C + C G + C C G G CE
Sbjct: 2 SHFNDCPDSHTQFCFHGTCRFLVQEDKPACVCHSGYVGARCE 43
>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 43
Score = 30.1 bits (68), Expect = 0.052
Identities = 10/39 (25%), Positives = 13/39 (33%), Gaps = 4/39 (10%)
Query: 356 NLCDSTRHNCSFGATCVPLTHSYECDCPPG--RTGKFCE 392
+ C C+ SY C+CP G G C
Sbjct: 6 DECKEPDVCKH--GQCINTDGSYRCECPFGYILAGNECV 42
Score = 29.3 bits (66), Expect = 0.083
Identities = 7/29 (24%), Positives = 11/29 (37%)
Query: 320 CHNHTCSHGGACMNHGATFSCLCADGWFG 348
C G C+N ++ C C G+
Sbjct: 8 CKEPDVCKHGQCINTDGSYRCECPFGYIL 36
>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human
(Homo sapiens) [TaxId: 9606]}
Length = 51
Score = 30.2 bits (68), Expect = 0.060
Identities = 12/40 (30%), Positives = 14/40 (35%), Gaps = 6/40 (15%)
Query: 357 LCDSTRHNCSFGATCVPLTHSYECDCPPGRT----GKFCE 392
LC +C C +S C C G T GK C
Sbjct: 2 LCSLDNGDCDQ--FCHEEQNSVVCSCARGYTLADNGKACI 39
Score = 25.9 bits (57), Expect = 1.6
Identities = 7/25 (28%), Positives = 9/25 (36%), Gaps = 2/25 (8%)
Query: 322 NHTCSHGGACMNHGATFSCLCADGW 346
N C C + C CA G+
Sbjct: 7 NGDCDQF--CHEEQNSVVCSCARGY 29
>d1h30a2 b.29.1.4 (A:461-678) Growth-arrest-specific protein Gas6
{Human (Homo sapiens) [TaxId: 9606]}
Length = 218
Score = 33.0 bits (74), Expect = 0.061
Identities = 11/68 (16%), Positives = 20/68 (29%), Gaps = 3/68 (4%)
Query: 427 ISFSGRRSYISLPSSELHLHEACIDLEIRPTKDKGLLMYFGHPQKNSMMTLSLQGGVLEL 486
+S L E + IRP D G+L P + + L +++
Sbjct: 26 AFYSLDYMRTPLDVGTESTWEVEVVAHIRPAADTGVLFALWAPDLRA---VPLSVALVDY 82
Query: 487 RVLMLGDR 494
+
Sbjct: 83 HSTKKLKK 90
Score = 32.2 bits (72), Expect = 0.100
Identities = 26/168 (15%), Positives = 49/168 (29%), Gaps = 16/168 (9%)
Query: 130 KGYVVLTWNLGSGWYLVYFEHTYLFILS-RLRSAQDTRLCCLPLHLILGVDFLCMSIYTS 188
G+ + + V E T+ + +R A DT + L ++ S
Sbjct: 23 SGFAFYSLDYMRTPLDVGTESTWEVEVVAHIRPAADTGV------LFALWAPDLRAVPLS 76
Query: 189 YLQPTGHMFVDTYRGPRRIFTPNTISAKSKRGG-----YTVRVGKNGQQCWLMVDNMGNV 243
H + + +T A + + V V + L VD
Sbjct: 77 VALVDYHSTKKLKKQLVVLAVEHTALALMEIKVCDGQEHVVTVSLRDGEATLEVDGTRGQ 136
Query: 244 TSKSPGRLTQLNTKPMLYLGGHFSKNFSILPHD----LPLHSGFSGCI 287
+ S +L + +L LP P+ + + GC+
Sbjct: 137 SEVSAAQLQERLAVLERHLRSPVLTFAGGLPDVPVTSAPVTAFYRGCM 184
>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated
serine protease 2, MASP2 {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 45
Score = 29.5 bits (66), Expect = 0.076
Identities = 10/32 (31%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Query: 315 CGTSQCHNHTCSHGGACMNHGATFSCLCADGW 346
C TS + C H C N+ + C C G+
Sbjct: 4 CRTSLGDSVPCDHY--CHNYLGGYYCSCRVGY 33
Score = 24.1 bits (52), Expect = 7.0
Identities = 6/31 (19%), Positives = 10/31 (32%), Gaps = 1/31 (3%)
Query: 356 NLCDSTRHNCSF-GATCVPLTHSYECDCPPG 385
+ C ++ + C Y C C G
Sbjct: 2 DECRTSLGDSVPCDHYCHNYLGGYYCSCRVG 32
>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated
serine protease 2, MASP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 45
Score = 29.5 bits (66), Expect = 0.085
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 312 VGQCGTSQCHNHTCSHGGACMNHGATFSCLCADGW 346
+ +C + TC H C NH F C C G+
Sbjct: 1 IDECQVAPGEAPTCDHH--CHNHLGGFYCSCRAGY 33
Score = 25.2 bits (55), Expect = 2.5
Identities = 7/46 (15%), Positives = 9/46 (19%), Gaps = 10/46 (21%)
Query: 351 CASRYNLCDSTRHNCSFGATCVPLTHSYECDCPPGRT----GKFCE 392
C C C + C C G + C
Sbjct: 4 CQVAPGEA----PTCD--HHCHNHLGGFYCSCRAGYVLHRNKRTCS 43
>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus)
[TaxId: 9913]}
Length = 51
Score = 29.4 bits (66), Expect = 0.089
Identities = 8/39 (20%), Positives = 8/39 (20%), Gaps = 6/39 (15%)
Query: 358 CDSTRHNCSFGATCVPLTHSYECDCPPGRT----GKFCE 392
C C C C C G K C
Sbjct: 1 CSLDNGGCDQ--FCREERSEVRCSCAHGYVLGDDSKSCV 37
Score = 25.9 bits (57), Expect = 1.5
Identities = 7/25 (28%), Positives = 9/25 (36%), Gaps = 2/25 (8%)
Query: 322 NHTCSHGGACMNHGATFSCLCADGW 346
N C C + C CA G+
Sbjct: 5 NGGCDQF--CREERSEVRCSCAHGY 27
>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin
IIa) {Human (Homo sapiens) [TaxId: 9606]}
Length = 50
Score = 29.0 bits (65), Expect = 0.14
Identities = 8/39 (20%), Positives = 10/39 (25%), Gaps = 6/39 (15%)
Query: 358 CDSTRHNCSFGATCVPLTHSYECDCPPGRT----GKFCE 392
C C+ C+ C C PG C
Sbjct: 2 CSLDNGGCTH--YCLEEVGWRRCSCAPGYKLGDDLLQCH 38
Score = 26.3 bits (58), Expect = 1.3
Identities = 8/25 (32%), Positives = 11/25 (44%), Gaps = 2/25 (8%)
Query: 322 NHTCSHGGACMNHGATFSCLCADGW 346
N C+H C+ C CA G+
Sbjct: 6 NGGCTH--YCLEEVGWRRCSCAPGY 28
>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 43
Score = 28.7 bits (64), Expect = 0.14
Identities = 14/41 (34%), Positives = 14/41 (34%), Gaps = 6/41 (14%)
Query: 356 NLCDSTRHNCSFGATCVPLTHSYECDCPPG----RTGKFCE 392
N C S CV SY CDCPP T C
Sbjct: 4 NECLDPTTCIS--GNCVNTPGSYICDCPPDFELNPTRVGCV 42
>d1so2a_ a.211.1.2 (A:) cGMP-inhibited 3',5'-cyclic
phosphodiesterase B, pde3b {Human (Homo sapiens) [TaxId:
9606]}
Length = 415
Score = 32.1 bits (72), Expect = 0.16
Identities = 13/97 (13%), Positives = 28/97 (28%), Gaps = 4/97 (4%)
Query: 34 NFQHYFDTNQPINQLLSIIFTNFLPPDIEIGQASYSSSMSGLSSFSAYVIPANIHHCFEL 93
N H D + L + G + + S ++ I + +
Sbjct: 80 NRIHATDVLHAVWYLTTRPVPGLQQIHNGCGTGNETDSDGRINHGRIAYISSKSCSNPDE 139
Query: 94 KFRFVPNSFDQI----ALLAFIGQDYQHDAITDHLAV 126
+ + ++ + +A DY H T+ V
Sbjct: 140 SYGCLSSNIPALELMALYVAAAMHDYDHPGRTNAFLV 176
>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo
sapiens) [TaxId: 9606]}
Length = 42
Score = 28.3 bits (63), Expect = 0.23
Identities = 7/29 (24%), Positives = 11/29 (37%), Gaps = 2/29 (6%)
Query: 318 SQCHNHTCSHGGACMNHGATFSCLCADGW 346
+ + CSH C N + C C +
Sbjct: 4 TDFVDVPCSHF--CNNFIGGYFCSCPPEY 30
Score = 24.4 bits (53), Expect = 5.2
Identities = 9/28 (32%), Positives = 9/28 (32%), Gaps = 2/28 (7%)
Query: 358 CDSTRHNCSFGATCVPLTHSYECDCPPG 385
D CS C Y C CPP
Sbjct: 4 TDFVDVPCS--HFCNNFIGGYFCSCPPE 29
>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor,
different EGF domains {Human (Homo sapiens) [TaxId:
9606]}
Length = 41
Score = 27.8 bits (62), Expect = 0.25
Identities = 11/37 (29%), Positives = 13/37 (35%), Gaps = 6/37 (16%)
Query: 360 STRHNCSFGATCVPLTHSYECDCPPGRT----GKFCE 392
CS CV L Y+C C G K C+
Sbjct: 5 QDPDTCS--QLCVNLEGGYKCQCEEGFQLDPHTKACK 39
Score = 26.6 bits (59), Expect = 0.81
Identities = 8/26 (30%), Positives = 12/26 (46%), Gaps = 2/26 (7%)
Query: 321 HNHTCSHGGACMNHGATFSCLCADGW 346
TCS C+N + C C +G+
Sbjct: 6 DPDTCSQL--CVNLEGGYKCQCEEGF 29
>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 40
Score = 27.4 bits (61), Expect = 0.37
Identities = 8/29 (27%), Positives = 10/29 (34%), Gaps = 2/29 (6%)
Query: 360 STRHNCSFGATCVPLTHSYECDCPPGRTG 388
CS C L ++EC C P
Sbjct: 6 ENGGFCS--GVCHNLPGTFECICGPDSAL 32
Score = 25.5 bits (56), Expect = 2.1
Identities = 8/25 (32%), Positives = 9/25 (36%), Gaps = 2/25 (8%)
Query: 322 NHTCSHGGACMNHGATFSCLCADGW 346
CS C N TF C+C
Sbjct: 8 GGFCSG--VCHNLPGTFECICGPDS 30
>d1l3ya_ g.3.11.6 (A:) Integrin beta EGF-like domains {Human (Homo
sapiens) [TaxId: 9606]}
Length = 41
Score = 26.7 bits (59), Expect = 0.76
Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 3/42 (7%)
Query: 314 QCGTSQCHNHTCSHGGACMNHGATFS--CLCADGWFGPLCAS 353
+C T C + G G F C C G+ G C +
Sbjct: 1 ECDTINCERYNGQVCG-GPGRGLCFCGKCRCHPGFEGSACQA 41
>d2bz6l1 g.3.11.1 (L:90-142) Coagulation factor VIIa {Human (Homo
sapiens) [TaxId: 9606]}
Length = 53
Score = 26.3 bits (58), Expect = 1.3
Identities = 9/41 (21%), Positives = 12/41 (29%), Gaps = 7/41 (17%)
Query: 357 LCDSTRHNCSFGATCVPLT-HSYECDCPPGRT----GKFCE 392
+C + C C T C C G + G C
Sbjct: 1 ICVNENGGCEQ--YCSDHTGTKRSCRCHEGYSLLADGVSCT 39
Score = 25.2 bits (55), Expect = 3.4
Identities = 8/26 (30%), Positives = 11/26 (42%), Gaps = 3/26 (11%)
Query: 322 NHTCSHGGACMN-HGATFSCLCADGW 346
N C C + G SC C +G+
Sbjct: 6 NGGCEQ--YCSDHTGTKRSCRCHEGY 29
>d1g8kb_ b.33.1.1 (B:) Arsenite oxidase Rieske subunit {Alcaligenes
faecalis [TaxId: 511]}
Length = 133
Score = 28.1 bits (62), Expect = 1.3
Identities = 9/60 (15%), Positives = 21/60 (35%), Gaps = 5/60 (8%)
Query: 301 LYKTRAAEGRGVGQCGTSQCHNHTCSHGGACMNHGATFSCLCADGWFGPLCASRYNLCDS 360
K A GVG ++ C+H G ++ + + + P + ++ +
Sbjct: 36 AVKLGAPVPGGVGPDDDIVAYSVLCTHMGCPTSYDS-----SSKTFSCPCHFTEFDAEKA 90
>d1kloa1 g.3.11.2 (A:11-65) Laminin gamma1 chain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 55
Score = 26.4 bits (58), Expect = 1.3
Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
Query: 364 NCSFGATCVPLTHSYE---CDCPPGRTGKFCEK 393
C G++C + + E CP G GK CE
Sbjct: 2 PCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCEL 34
>d2i9aa1 g.3.11.1 (A:10-49) Plasminogen activator (urokinase-type)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 40
Score = 25.7 bits (56), Expect = 2.0
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Query: 365 CSFGATCVP---LTHSYECDCPPGRTGKFCEKDES 396
C G TCV ++ + C+CP G+ CE D+S
Sbjct: 4 CLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKS 38
>d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL)
receptor, different EGF domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 50
Score = 24.9 bits (54), Expect = 4.5
Identities = 10/39 (25%), Positives = 13/39 (33%), Gaps = 4/39 (10%)
Query: 312 VGQCGTSQCHNHTCSH----GGACMNHGATFSCLCADGW 346
V C + N C + H F+C C DG
Sbjct: 1 VNWCERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGM 39
Score = 24.5 bits (53), Expect = 6.3
Identities = 6/23 (26%), Positives = 9/23 (39%)
Query: 363 HNCSFGATCVPLTHSYECDCPPG 385
+ C P + + C CP G
Sbjct: 16 YLCLPAPQINPHSPKFTCACPDG 38
>d1rfnb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId:
9606]}
Length = 57
Score = 24.8 bits (54), Expect = 4.6
Identities = 9/40 (22%), Positives = 11/40 (27%), Gaps = 7/40 (17%)
Query: 358 CDSTRHNCSFGATCVPLT-HSYECDCPPGRT----GKFCE 392
C+ C C + C C G K CE
Sbjct: 3 CNIKNGRCEQ--FCKNSADNKVVCSCTEGYRLAENQKSCE 40
>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 39
Score = 24.1 bits (52), Expect = 5.3
Identities = 10/31 (32%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Query: 317 TSQCH-NHTCSHGGACMNHGATFSCLCADGW 346
T +C + C +G C N F C C +G+
Sbjct: 1 TDECSVGNPCGNG-TCKNVIGGFECTCEEGF 30
>d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase
{Thermus thermophilus [TaxId: 274]}
Length = 516
Score = 27.2 bits (59), Expect = 6.3
Identities = 10/31 (32%), Positives = 11/31 (35%), Gaps = 4/31 (12%)
Query: 291 ELSAGNVGINLYKTRAAEGR----GVGQCGT 317
E GN+ N T A G G GT
Sbjct: 463 EFHVGNLYFNRKITGALVGVQPFGGFKLSGT 493
>d1xdtr_ g.3.11.1 (R:) Heparin-binding epidermal growth factor,
HBEGF {Human (Homo sapiens) [TaxId: 9606]}
Length = 41
Score = 23.9 bits (52), Expect = 8.3
Identities = 10/33 (30%), Positives = 13/33 (39%), Gaps = 3/33 (9%)
Query: 321 HNHTCSHGGACMNHGA--TFSCLCADGWFGPLC 351
+ C HG C SC+C G+ G C
Sbjct: 6 YKDFCIHG-ECKYVKELRAPSCICHPGYHGERC 37
>d1jv2b4 g.3.11.6 (B:532-562) Integrin beta EGF-like domains {Human
(Homo sapiens) [TaxId: 9606]}
Length = 31
Score = 23.6 bits (51), Expect = 8.6
Identities = 10/26 (38%), Positives = 10/26 (38%), Gaps = 2/26 (7%)
Query: 328 GGACMNHGATF--SCLCADGWFGPLC 351
G C HG CLC W G C
Sbjct: 2 GEMCSGHGQCSCGDCLCDSDWTGYYC 27
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.323 0.139 0.444
Gapped
Lambda K H
0.267 0.0655 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,911,984
Number of extensions: 91681
Number of successful extensions: 382
Number of sequences better than 10.0: 1
Number of HSP's gapped: 362
Number of HSP's successfully gapped: 126
Length of query: 500
Length of database: 2,407,596
Length adjustment: 89
Effective length of query: 411
Effective length of database: 1,185,626
Effective search space: 487292286
Effective search space used: 487292286
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.1 bits)