BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7023
(364 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 350 bits (897), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 167/240 (69%), Positives = 195/240 (81%), Gaps = 1/240 (0%)
Query: 109 LYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDF-RSLAEHPCAIKVANENASEREKA 167
++ D WEV R K+T+L ELG GSFG+VY G +D + AE A+K NE+AS RE+
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
EFLNEASVMK F HHVV+L GVVS+G PTLV+MELM GDLK+YLRS RP+AE + R
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
PPTL ++QMAAE+ADGMAYL KKFVHRDLAARNCMVA D TVK+GDFGMTRDIYET+Y
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDY 185
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV 347
YRKG +G LPVRWMAPESLKDGVFT+ SD+WS+GVVLWE+ +LA QPYQGLSNEQVL +V
Sbjct: 186 YRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFV 245
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 350 bits (897), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 167/240 (69%), Positives = 195/240 (81%), Gaps = 1/240 (0%)
Query: 109 LYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDF-RSLAEHPCAIKVANENASEREKA 167
+Y D WEV R K+T+L ELG GSFG+VY G +D + AE A+K NE+AS RE+
Sbjct: 6 VYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
EFLNEASVMK F HHVV+L GVVS+G PTLV+MELM GDLK+YLRS RP+AE + R
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
PPTL ++QMAAE+ADGMAYL KKFVHR+LAARNCMVA D TVK+GDFGMTRDIYET+Y
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDY 185
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV 347
YRKG +G LPVRWMAPESLKDGVFT+ SD+WS+GVVLWE+ +LA QPYQGLSNEQVL +V
Sbjct: 186 YRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFV 245
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 349 bits (896), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 167/240 (69%), Positives = 195/240 (81%), Gaps = 1/240 (0%)
Query: 109 LYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDF-RSLAEHPCAIKVANENASEREKA 167
+Y D WEV R K+T+L ELG GSFG+VY G +D + AE A+K NE+AS RE+
Sbjct: 7 VYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 66
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
EFLNEASVMK F HHVV+L GVVS+G PTLV+MELM GDLK+YLRS RP+AE + R
Sbjct: 67 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 126
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
PPTL ++QMAAE+ADGMAYL KKFVHR+LAARNCMVA D TVK+GDFGMTRDIYET+Y
Sbjct: 127 PPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDY 186
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV 347
YRKG +G LPVRWMAPESLKDGVFT+ SD+WS+GVVLWE+ +LA QPYQGLSNEQVL +V
Sbjct: 187 YRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFV 246
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 349 bits (895), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 167/240 (69%), Positives = 194/240 (80%), Gaps = 1/240 (0%)
Query: 109 LYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDF-RSLAEHPCAIKVANENASEREKA 167
++ D WEV R K+T+L ELG GSFG+VY G +D + AE A+K NE+AS RE+
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
EFLNEASVMK F HHVV+L GVVS+G PTLV+MELM GDLK+YLRS RP+AE + R
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
PPTL ++QMAAE+ADGMAYL KKFVHRDLAARNCMVA D TVK+GDFGMTRDIYET Y
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAY 185
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV 347
YRKG +G LPVRWMAPESLKDGVFT+ SD+WS+GVVLWE+ +LA QPYQGLSNEQVL +V
Sbjct: 186 YRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFV 245
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 347 bits (889), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 166/240 (69%), Positives = 195/240 (81%), Gaps = 1/240 (0%)
Query: 109 LYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDF-RSLAEHPCAIKVANENASEREKA 167
+Y D WEV R K+T+ ELG GSFG+VY G+ K + E AIK NE AS RE+
Sbjct: 7 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 66
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
EFLNEASVMK F+ HHVV+L GVVS+G PTLVIMELM GDLK+YLRS RP+ E + +
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
PP+LS+++QMA E+ADGMAYL KFVHRDLAARNCMVA+D TVK+GDFGMTRDIYET+Y
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 186
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV 347
YRKG +G LPVRWM+PESLKDGVFT++SDVWS+GVVLWE+ATLA QPYQGLSNEQVL +V
Sbjct: 187 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 246
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 346 bits (888), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 166/240 (69%), Positives = 195/240 (81%), Gaps = 1/240 (0%)
Query: 109 LYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDF-RSLAEHPCAIKVANENASEREKA 167
+Y D WEV R K+T+ ELG GSFG+VY G+ K + E AIK NE AS RE+
Sbjct: 7 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 66
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
EFLNEASVMK F+ HHVV+L GVVS+G PTLVIMELM GDLK+YLRS RP+ E + +
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
PP+LS+++QMA E+ADGMAYL KFVHRDLAARNCMVA+D TVK+GDFGMTRDIYET+Y
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 186
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV 347
YRKG +G LPVRWM+PESLKDGVFT++SDVWS+GVVLWE+ATLA QPYQGLSNEQVL +V
Sbjct: 187 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 246
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 346 bits (888), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 166/240 (69%), Positives = 195/240 (81%), Gaps = 1/240 (0%)
Query: 109 LYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDF-RSLAEHPCAIKVANENASEREKA 167
+Y D WEV R K+T+ ELG GSFG+VY G+ K + E AIK NE AS RE+
Sbjct: 14 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 73
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
EFLNEASVMK F+ HHVV+L GVVS+G PTLVIMELM GDLK+YLRS RP+ E + +
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 133
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
PP+LS+++QMA E+ADGMAYL KFVHRDLAARNCMVA+D TVK+GDFGMTRDIYET+Y
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 193
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV 347
YRKG +G LPVRWM+PESLKDGVFT++SDVWS+GVVLWE+ATLA QPYQGLSNEQVL +V
Sbjct: 194 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 253
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 346 bits (888), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 166/240 (69%), Positives = 195/240 (81%), Gaps = 1/240 (0%)
Query: 109 LYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDF-RSLAEHPCAIKVANENASEREKA 167
+Y D WEV R K+T+ ELG GSFG+VY G+ K + E AIK NE AS RE+
Sbjct: 8 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 67
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
EFLNEASVMK F+ HHVV+L GVVS+G PTLVIMELM GDLK+YLRS RP+ E + +
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
PP+LS+++QMA E+ADGMAYL KFVHRDLAARNCMVA+D TVK+GDFGMTRDIYET+Y
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 187
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV 347
YRKG +G LPVRWM+PESLKDGVFT++SDVWS+GVVLWE+ATLA QPYQGLSNEQVL +V
Sbjct: 188 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 247
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 346 bits (887), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 166/240 (69%), Positives = 195/240 (81%), Gaps = 1/240 (0%)
Query: 109 LYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDF-RSLAEHPCAIKVANENASEREKA 167
+Y D WEV R K+T+ ELG GSFG+VY G+ K + E AIK NE AS RE+
Sbjct: 36 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 95
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
EFLNEASVMK F+ HHVV+L GVVS+G PTLVIMELM GDLK+YLRS RP+ E + +
Sbjct: 96 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 155
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
PP+LS+++QMA E+ADGMAYL KFVHRDLAARNCMVA+D TVK+GDFGMTRDIYET+Y
Sbjct: 156 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 215
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV 347
YRKG +G LPVRWM+PESLKDGVFT++SDVWS+GVVLWE+ATLA QPYQGLSNEQVL +V
Sbjct: 216 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 275
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 345 bits (884), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 165/240 (68%), Positives = 195/240 (81%), Gaps = 1/240 (0%)
Query: 109 LYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDF-RSLAEHPCAIKVANENASEREKA 167
++ D WEV R K+T+ ELG GSFG+VY G+ K + E AIK NE AS RE+
Sbjct: 5 VFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 64
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
EFLNEASVMK F+ HHVV+L GVVS+G PTLVIMELM GDLK+YLRS RP+ E + +
Sbjct: 65 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 124
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
PP+LS+++QMA E+ADGMAYL KFVHRDLAARNCMVA+D TVK+GDFGMTRDIYET+Y
Sbjct: 125 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 184
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV 347
YRKG +G LPVRWM+PESLKDGVFT++SDVWS+GVVLWE+ATLA QPYQGLSNEQVL +V
Sbjct: 185 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 244
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 344 bits (883), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 165/236 (69%), Positives = 193/236 (81%), Gaps = 1/236 (0%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDF-RSLAEHPCAIKVANENASEREKAEFLN 171
D WEV R K+T+ ELG GSFG+VY G+ K + E AIK NE AS RE+ EFLN
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
EASVMK F+ HHVV+L GVVS+G PTLVIMELM GDLK+YLRS RP+ E + +PP+L
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 124
Query: 232 SRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKG 291
S+++QMA E+ADGMAYL KFVHRDLAARNCMVA+D TVK+GDFGMTRDIYET+YYRKG
Sbjct: 125 SKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 184
Query: 292 SRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV 347
+G LPVRWM+PESLKDGVFT++SDVWS+GVVLWE+ATLA QPYQGLSNEQVL +V
Sbjct: 185 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 240
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 343 bits (881), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 165/240 (68%), Positives = 194/240 (80%), Gaps = 1/240 (0%)
Query: 109 LYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDF-RSLAEHPCAIKVANENASEREKA 167
+Y D WEV R K+T+ ELG GSFG+VY G+ K + E AIK NE AS RE+
Sbjct: 1 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 60
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
EFLNEASVMK F+ HHVV+L GVVS+G PTLVIMELM GDLK+YLRS RP+ E + +
Sbjct: 61 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
PP+LS+++QMA E+ADGMAYL KFVHRDLAARNC VA+D TVK+GDFGMTRDIYET+Y
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDY 180
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV 347
YRKG +G LPVRWM+PESLKDGVFT++SDVWS+GVVLWE+ATLA QPYQGLSNEQVL +V
Sbjct: 181 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 240
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 343 bits (881), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 165/233 (70%), Positives = 191/233 (81%), Gaps = 1/233 (0%)
Query: 116 EVLRSKVTILDELGNGSFGLVYRGLIKDF-RSLAEHPCAIKVANENASEREKAEFLNEAS 174
EV R K+T+L ELG GSFG+VY G +D + AE A+K NE+AS RE+ EFLNEAS
Sbjct: 12 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 71
Query: 175 VMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRI 234
VMK F HHVV+L GVVS+G PTLV+MELM GDLK+YLRS RP+AE + R PPTL +
Sbjct: 72 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 131
Query: 235 LQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRG 294
+QMAAE+ADGMAYL KKFVHRDLAARNCMVA D TVK+GDFGMTRDIYET+YYRKG +G
Sbjct: 132 IQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKG 191
Query: 295 FLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV 347
LPVRWMAPESLKDGVFT+ SD+WS+GVVLWE+ +LA QPYQGLSNEQVL +V
Sbjct: 192 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFV 244
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 343 bits (879), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 165/240 (68%), Positives = 193/240 (80%), Gaps = 1/240 (0%)
Query: 109 LYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDF-RSLAEHPCAIKVANENASEREKA 167
+Y D WEV R K+T+ ELG GSFG+VY G+ K + E AIK NE AS RE+
Sbjct: 14 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 73
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
EFLNEASVMK F+ HHVV+L GVVS+G PTLVIMELM GDLK+YLRS RP + +
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 133
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
PP+LS+++QMA E+ADGMAYL KFVHRDLAARNCMVA+D TVK+GDFGMTRDIYET+Y
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 193
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV 347
YRKG +G LPVRWM+PESLKDGVFT++SDVWS+GVVLWE+ATLA QPYQGLSNEQVL +V
Sbjct: 194 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 253
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 342 bits (878), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 165/240 (68%), Positives = 193/240 (80%), Gaps = 1/240 (0%)
Query: 109 LYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDF-RSLAEHPCAIKVANENASEREKA 167
+Y D WEV R K+T+ ELG GSFG+VY G+ K + E AIK NE AS RE+
Sbjct: 4 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 63
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
EFLNEASVMK F+ HHVV+L GVVS+G PTLVIMELM GDLK+YLRS RP + +
Sbjct: 64 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 123
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
PP+LS+++QMA E+ADGMAYL KFVHRDLAARNCMVA+D TVK+GDFGMTRDIYET+Y
Sbjct: 124 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 183
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV 347
YRKG +G LPVRWM+PESLKDGVFT++SDVWS+GVVLWE+ATLA QPYQGLSNEQVL +V
Sbjct: 184 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 243
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 342 bits (877), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 165/240 (68%), Positives = 192/240 (80%), Gaps = 1/240 (0%)
Query: 109 LYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDF-RSLAEHPCAIKVANENASEREKA 167
+Y D WEV R K+T+L ELG GSFG+VY G +D + AE A+K NE+AS RE+
Sbjct: 6 VYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
EFLNEASVMK F HHVV+L GVVS+G PTLV+MELM GDLK+YLRS RP+AE + R
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
PPTL ++QMAAE+ADGMAYL KKFVHRDLAARNCMVA D TVK+GDFGMTRDI ET+
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDX 185
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV 347
RKG +G LPVRWMAPESLKDGVFT+ SD+WS+GVVLWE+ +LA QPYQGLSNEQVL +V
Sbjct: 186 XRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFV 245
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 341 bits (875), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 164/240 (68%), Positives = 192/240 (80%), Gaps = 1/240 (0%)
Query: 109 LYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDF-RSLAEHPCAIKVANENASEREKA 167
++ D WEV R K+T+L ELG GSFG+VY G +D + AE A+K NE+AS RE+
Sbjct: 3 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 62
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
EFLNEASVMK F HHVV+L GVVS+G PTLV+MELM GDLK+YLRS RP+AE + R
Sbjct: 63 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 122
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
PPTL ++QMAAE+ADGMAYL KKFVHRDLAARNCMVA D TVK+GDFGMTRDI ET+
Sbjct: 123 PPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDX 182
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV 347
RKG +G LPVRWMAPESLKDGVFT+ SD+WS+GVVLWE+ +LA QPYQGLSNEQVL +V
Sbjct: 183 XRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFV 242
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 341 bits (874), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 164/240 (68%), Positives = 192/240 (80%), Gaps = 1/240 (0%)
Query: 109 LYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDF-RSLAEHPCAIKVANENASEREKA 167
++ D WEV R K+T+L ELG GSFG+VY G +D + AE A+K NE+AS RE+
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
EFLNEASVMK F HHVV+L GVVS+G PTLV+MELM GDLK+YLRS RP+AE + R
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
PPTL ++QMAAE+ADGMAYL KKFVHRDLAARNCMVA D TVK+GDFGMTRDI ET+
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDX 185
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV 347
RKG +G LPVRWMAPESLKDGVFT+ SD+WS+GVVLWE+ +LA QPYQGLSNEQVL +V
Sbjct: 186 XRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFV 245
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 337 bits (864), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 163/240 (67%), Positives = 192/240 (80%), Gaps = 1/240 (0%)
Query: 109 LYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDF-RSLAEHPCAIKVANENASEREKA 167
+Y D WEV R K+T+ ELG GSFG+VY G+ K + E AIK NE AS RE+
Sbjct: 8 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 67
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
EFLNEASVMK F+ HHVV+L GVVS+G PTLVIMELM GDLK+YLRS RP+ E + +
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
PP+LS+++QMA E+ADGMAYL KFVHRDLAARNCMVA+D TVK+GDFGMTRDI ET+
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDX 187
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV 347
RKG +G LPVRWM+PESLKDGVFT++SDVWS+GVVLWE+ATLA QPYQGLSNEQVL +V
Sbjct: 188 XRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 247
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 336 bits (861), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 162/236 (68%), Positives = 190/236 (80%), Gaps = 1/236 (0%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDF-RSLAEHPCAIKVANENASEREKAEFLN 171
D WEV R K+T+ ELG GSFG+VY G+ K + E AIK NE AS RE+ EFLN
Sbjct: 3 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 62
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
EASVMK F+ HHVV+L GVVS+G PTLVIMELM GDLK+YLRS RP+ E + +PP+L
Sbjct: 63 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 122
Query: 232 SRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKG 291
S+++QMA E+ADGMAYL KFVHRDLAARNCMVA+D TVK+GDFGMTRDI ET+ RKG
Sbjct: 123 SKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKG 182
Query: 292 SRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV 347
+G LPVRWM+PESLKDGVFT++SDVWS+GVVLWE+ATLA QPYQGLSNEQVL +V
Sbjct: 183 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 238
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 208 bits (529), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 106/251 (42%), Positives = 148/251 (58%), Gaps = 6/251 (2%)
Query: 116 EVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASV 175
+ R + + ELG G+FG V+ + + A + ASE + +F EA +
Sbjct: 14 HIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAEL 73
Query: 176 MKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAE-----TDVERSPPT 230
+ H+V+ +GV +EG P L++ E M GDL +LRS PDA+ DV P
Sbjct: 74 LTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLG 133
Query: 231 LSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRK 290
L ++L +A++VA GM YLA FVHRDLA RNC+V L VK+GDFGM+RDIY T+YYR
Sbjct: 134 LGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRV 193
Query: 291 GSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV-KG 349
G R LP+RWM PES+ FT+ SDVWS+GVVLWE+ T QP+ LSN + ++ + +G
Sbjct: 194 GGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQG 253
Query: 350 KSSNEYKVNPP 360
+ + PP
Sbjct: 254 RELERPRACPP 264
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 207 bits (528), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 106/251 (42%), Positives = 148/251 (58%), Gaps = 6/251 (2%)
Query: 116 EVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASV 175
+ R + + ELG G+FG V+ + + A + ASE + +F EA +
Sbjct: 37 HIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAEL 96
Query: 176 MKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAE-----TDVERSPPT 230
+ H+V+ +GV +EG P L++ E M GDL +LRS PDA+ DV P
Sbjct: 97 LTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLG 156
Query: 231 LSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRK 290
L ++L +A++VA GM YLA FVHRDLA RNC+V L VK+GDFGM+RDIY T+YYR
Sbjct: 157 LGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRV 216
Query: 291 GSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV-KG 349
G R LP+RWM PES+ FT+ SDVWS+GVVLWE+ T QP+ LSN + ++ + +G
Sbjct: 217 GGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQG 276
Query: 350 KSSNEYKVNPP 360
+ + PP
Sbjct: 277 RELERPRACPP 287
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 207 bits (528), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 106/251 (42%), Positives = 148/251 (58%), Gaps = 6/251 (2%)
Query: 116 EVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASV 175
+ R + + ELG G+FG V+ + + A + ASE + +F EA +
Sbjct: 8 HIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAEL 67
Query: 176 MKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAE-----TDVERSPPT 230
+ H+V+ +GV +EG P L++ E M GDL +LRS PDA+ DV P
Sbjct: 68 LTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLG 127
Query: 231 LSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRK 290
L ++L +A++VA GM YLA FVHRDLA RNC+V L VK+GDFGM+RDIY T+YYR
Sbjct: 128 LGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRV 187
Query: 291 GSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV-KG 349
G R LP+RWM PES+ FT+ SDVWS+GVVLWE+ T QP+ LSN + ++ + +G
Sbjct: 188 GGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQG 247
Query: 350 KSSNEYKVNPP 360
+ + PP
Sbjct: 248 RELERPRACPP 258
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 206 bits (525), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 104/238 (43%), Positives = 148/238 (62%), Gaps = 9/238 (3%)
Query: 116 EVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANE---NASEREKAEFLNE 172
+ R + + ELG G+FG V+ + + +L I VA + +AS+ + +F E
Sbjct: 9 HIKRHNIVLKRELGEGAFGKVF---LAECYNLCPEQDKILVAVKTLKDASDNARKDFHRE 65
Query: 173 ASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPT-- 230
A ++ H+VK YGV EG+P +++ E M GDL +LR+ PDA E +PPT
Sbjct: 66 AELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTEL 125
Query: 231 -LSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYR 289
S++L +A ++A GM YLA + FVHRDLA RNC+V ++L VK+GDFGM+RD+Y T+YYR
Sbjct: 126 TQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYR 185
Query: 290 KGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV 347
G LP+RWM PES+ FT+ SDVWS GVVLWE+ T QP+ LSN +V+ +
Sbjct: 186 VGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECI 243
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 200 bits (508), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 99/251 (39%), Positives = 148/251 (58%), Gaps = 7/251 (2%)
Query: 116 EVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASV 175
+ R + + ELG G+FG V+ + + A ++ + + +F EA +
Sbjct: 11 HIKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAEL 70
Query: 176 MKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPT----- 230
+ H+VK YGV +G+P +++ E M GDL +LR+ PDA V+ P
Sbjct: 71 LTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGEL 130
Query: 231 -LSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYR 289
LS++L +A+++A GM YLA + FVHRDLA RNC+V +L VK+GDFGM+RD+Y T+YYR
Sbjct: 131 GLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYR 190
Query: 290 KGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV-K 348
G LP+RWM PES+ FT+ SDVWS+GV+LWE+ T QP+ LSN +V+ + +
Sbjct: 191 VGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQ 250
Query: 349 GKSSNEYKVNP 359
G+ +V P
Sbjct: 251 GRVLERPRVCP 261
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 197 bits (501), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 100/252 (39%), Positives = 150/252 (59%), Gaps = 11/252 (4%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDF-RSLAEHPCAIKVANENASEREKAEFLN 171
D EV R +T++ LG+G+FG VY G + + A+K E SE+++ +FL
Sbjct: 38 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 97
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
EA ++ F+ ++V+ GV + P ++MELM GGDLK++LR RP + S +
Sbjct: 98 EALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPS---QPSSLAM 154
Query: 232 SRILQMAAEVADGMAYLADKKFVHRDLAARNCMV---ADDLTVKVGDFGMTRDIYETEYY 288
+L +A ++A G YL + F+HRD+AARNC++ K+GDFGM RDIY YY
Sbjct: 155 LDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 214
Query: 289 RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVK 348
RKG LPV+WM PE+ +G+FTS +D WS+GV+LWE+ +L PY SN++VL +V
Sbjct: 215 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT 274
Query: 349 GKSSNEYKVNPP 360
+++PP
Sbjct: 275 SGG----RMDPP 282
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 197 bits (501), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 100/252 (39%), Positives = 150/252 (59%), Gaps = 11/252 (4%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDF-RSLAEHPCAIKVANENASEREKAEFLN 171
D EV R +T++ LG+G+FG VY G + + A+K E SE+++ +FL
Sbjct: 23 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 82
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
EA ++ F+ ++V+ GV + P ++MELM GGDLK++LR RP + S +
Sbjct: 83 EALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPS---QPSSLAM 139
Query: 232 SRILQMAAEVADGMAYLADKKFVHRDLAARNCMV---ADDLTVKVGDFGMTRDIYETEYY 288
+L +A ++A G YL + F+HRD+AARNC++ K+GDFGM RDIY YY
Sbjct: 140 LDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 199
Query: 289 RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVK 348
RKG LPV+WM PE+ +G+FTS +D WS+GV+LWE+ +L PY SN++VL +V
Sbjct: 200 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT 259
Query: 349 GKSSNEYKVNPP 360
+++PP
Sbjct: 260 SGG----RMDPP 267
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 196 bits (497), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/252 (39%), Positives = 150/252 (59%), Gaps = 11/252 (4%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDF-RSLAEHPCAIKVANENASEREKAEFLN 171
D EV R +T++ LG+G+FG VY G + + A+K E SE+++ +FL
Sbjct: 40 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 99
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
EA ++ F+ ++V+ GV + P +++ELM GGDLK++LR RP + S +
Sbjct: 100 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS---QPSSLAM 156
Query: 232 SRILQMAAEVADGMAYLADKKFVHRDLAARNCMV---ADDLTVKVGDFGMTRDIYETEYY 288
+L +A ++A G YL + F+HRD+AARNC++ K+GDFGM RDIY YY
Sbjct: 157 LDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 216
Query: 289 RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVK 348
RKG LPV+WM PE+ +G+FTS +D WS+GV+LWE+ +L PY SN++VL +V
Sbjct: 217 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT 276
Query: 349 GKSSNEYKVNPP 360
+++PP
Sbjct: 277 SGG----RMDPP 284
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 196 bits (497), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/252 (39%), Positives = 150/252 (59%), Gaps = 11/252 (4%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDF-RSLAEHPCAIKVANENASEREKAEFLN 171
D EV R +T++ LG+G+FG VY G + + A+K E SE+++ +FL
Sbjct: 23 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 82
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
EA ++ F+ ++V+ GV + P +++ELM GGDLK++LR RP + S +
Sbjct: 83 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS---QPSSLAM 139
Query: 232 SRILQMAAEVADGMAYLADKKFVHRDLAARNCMV---ADDLTVKVGDFGMTRDIYETEYY 288
+L +A ++A G YL + F+HRD+AARNC++ K+GDFGM RDIY YY
Sbjct: 140 LDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 199
Query: 289 RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVK 348
RKG LPV+WM PE+ +G+FTS +D WS+GV+LWE+ +L PY SN++VL +V
Sbjct: 200 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT 259
Query: 349 GKSSNEYKVNPP 360
+++PP
Sbjct: 260 SGG----RMDPP 267
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 196 bits (497), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/252 (39%), Positives = 150/252 (59%), Gaps = 11/252 (4%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDF-RSLAEHPCAIKVANENASEREKAEFLN 171
D EV R +T++ LG+G+FG VY G + + A+K E SE+++ +FL
Sbjct: 30 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 89
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
EA ++ F+ ++V+ GV + P +++ELM GGDLK++LR RP + S +
Sbjct: 90 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS---QPSSLAM 146
Query: 232 SRILQMAAEVADGMAYLADKKFVHRDLAARNCMV---ADDLTVKVGDFGMTRDIYETEYY 288
+L +A ++A G YL + F+HRD+AARNC++ K+GDFGM RDIY YY
Sbjct: 147 LDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 206
Query: 289 RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVK 348
RKG LPV+WM PE+ +G+FTS +D WS+GV+LWE+ +L PY SN++VL +V
Sbjct: 207 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT 266
Query: 349 GKSSNEYKVNPP 360
+++PP
Sbjct: 267 SGG----RMDPP 274
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 196 bits (497), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/252 (39%), Positives = 150/252 (59%), Gaps = 11/252 (4%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDF-RSLAEHPCAIKVANENASEREKAEFLN 171
D EV R +T++ LG+G+FG VY G + + A+K E SE+++ +FL
Sbjct: 24 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 83
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
EA ++ F+ ++V+ GV + P +++ELM GGDLK++LR RP + S +
Sbjct: 84 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS---QPSSLAM 140
Query: 232 SRILQMAAEVADGMAYLADKKFVHRDLAARNCMV---ADDLTVKVGDFGMTRDIYETEYY 288
+L +A ++A G YL + F+HRD+AARNC++ K+GDFGM RDIY YY
Sbjct: 141 LDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 200
Query: 289 RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVK 348
RKG LPV+WM PE+ +G+FTS +D WS+GV+LWE+ +L PY SN++VL +V
Sbjct: 201 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT 260
Query: 349 GKSSNEYKVNPP 360
+++PP
Sbjct: 261 SGG----RMDPP 268
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 196 bits (497), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/252 (39%), Positives = 150/252 (59%), Gaps = 11/252 (4%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDF-RSLAEHPCAIKVANENASEREKAEFLN 171
D EV R +T++ LG+G+FG VY G + + A+K E SE+++ +FL
Sbjct: 15 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 74
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
EA ++ F+ ++V+ GV + P +++ELM GGDLK++LR RP + S +
Sbjct: 75 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS---QPSSLAM 131
Query: 232 SRILQMAAEVADGMAYLADKKFVHRDLAARNCMV---ADDLTVKVGDFGMTRDIYETEYY 288
+L +A ++A G YL + F+HRD+AARNC++ K+GDFGM RDIY YY
Sbjct: 132 LDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 191
Query: 289 RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVK 348
RKG LPV+WM PE+ +G+FTS +D WS+GV+LWE+ +L PY SN++VL +V
Sbjct: 192 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT 251
Query: 349 GKSSNEYKVNPP 360
+++PP
Sbjct: 252 SGG----RMDPP 259
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 196 bits (497), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/252 (39%), Positives = 150/252 (59%), Gaps = 11/252 (4%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDF-RSLAEHPCAIKVANENASEREKAEFLN 171
D EV R +T++ LG+G+FG VY G + + A+K E SE+++ +FL
Sbjct: 50 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 109
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
EA ++ F+ ++V+ GV + P +++ELM GGDLK++LR RP + S +
Sbjct: 110 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS---QPSSLAM 166
Query: 232 SRILQMAAEVADGMAYLADKKFVHRDLAARNCMV---ADDLTVKVGDFGMTRDIYETEYY 288
+L +A ++A G YL + F+HRD+AARNC++ K+GDFGM RDIY YY
Sbjct: 167 LDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 226
Query: 289 RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVK 348
RKG LPV+WM PE+ +G+FTS +D WS+GV+LWE+ +L PY SN++VL +V
Sbjct: 227 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT 286
Query: 349 GKSSNEYKVNPP 360
+++PP
Sbjct: 287 SGG----RMDPP 294
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 195 bits (495), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 99/252 (39%), Positives = 150/252 (59%), Gaps = 11/252 (4%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDF-RSLAEHPCAIKVANENASEREKAEFLN 171
D EV R +T++ LG+G+FG VY G + + A+K E SE+++ +FL
Sbjct: 64 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 123
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
EA ++ F+ ++V+ GV + P +++ELM GGDLK++LR RP + S +
Sbjct: 124 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS---QPSSLAM 180
Query: 232 SRILQMAAEVADGMAYLADKKFVHRDLAARNCMV---ADDLTVKVGDFGMTRDIYETEYY 288
+L +A ++A G YL + F+HRD+AARNC++ K+GDFGM RDIY YY
Sbjct: 181 LDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYY 240
Query: 289 RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVK 348
RKG LPV+WM PE+ +G+FTS +D WS+GV+LWE+ +L PY SN++VL +V
Sbjct: 241 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT 300
Query: 349 GKSSNEYKVNPP 360
+++PP
Sbjct: 301 SGG----RMDPP 308
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 195 bits (495), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 99/252 (39%), Positives = 150/252 (59%), Gaps = 11/252 (4%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDF-RSLAEHPCAIKVANENASEREKAEFLN 171
D EV R +T++ LG+G+FG VY G + + A+K E SE+++ +FL
Sbjct: 41 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 100
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
EA ++ F+ ++V+ GV + P +++ELM GGDLK++LR RP + S +
Sbjct: 101 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS---QPSSLAM 157
Query: 232 SRILQMAAEVADGMAYLADKKFVHRDLAARNCMV---ADDLTVKVGDFGMTRDIYETEYY 288
+L +A ++A G YL + F+HRD+AARNC++ K+GDFGM RDIY YY
Sbjct: 158 LDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYY 217
Query: 289 RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVK 348
RKG LPV+WM PE+ +G+FTS +D WS+GV+LWE+ +L PY SN++VL +V
Sbjct: 218 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT 277
Query: 349 GKSSNEYKVNPP 360
+++PP
Sbjct: 278 SGG----RMDPP 285
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 195 bits (495), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 99/252 (39%), Positives = 150/252 (59%), Gaps = 11/252 (4%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDF-RSLAEHPCAIKVANENASEREKAEFLN 171
D EV R +T++ LG+G+FG VY G + + A+K E SE+++ +FL
Sbjct: 38 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLM 97
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
EA ++ F+ ++V+ GV + P +++ELM GGDLK++LR RP + S +
Sbjct: 98 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS---QPSSLAM 154
Query: 232 SRILQMAAEVADGMAYLADKKFVHRDLAARNCMV---ADDLTVKVGDFGMTRDIYETEYY 288
+L +A ++A G YL + F+HRD+AARNC++ K+GDFGM RDIY YY
Sbjct: 155 LDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 214
Query: 289 RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVK 348
RKG LPV+WM PE+ +G+FTS +D WS+GV+LWE+ +L PY SN++VL +V
Sbjct: 215 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT 274
Query: 349 GKSSNEYKVNPP 360
+++PP
Sbjct: 275 SGG----RMDPP 282
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 194 bits (493), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 102/265 (38%), Positives = 155/265 (58%), Gaps = 19/265 (7%)
Query: 116 EVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHP---CAIKVANENASEREKAEFLNE 172
E R+ + + ++G G+FG V++ L P A+K+ E AS +A+F E
Sbjct: 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGL--LPYEPFTMVAVKMLKEEASADMQADFQRE 100
Query: 173 ASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS----- 227
A++M FD ++VKL GV + G P ++ E M GDL +LRS P + S
Sbjct: 101 AALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTR 160
Query: 228 -------PPTLSRILQM--AAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGM 278
PP LS Q+ A +VA GMAYL+++KFVHRDLA RNC+V +++ VK+ DFG+
Sbjct: 161 ARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGL 220
Query: 279 TRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGL 338
+R+IY +YY+ +P+RWM PES+ +T+ SDVW+YGVVLWE+ + QPY G+
Sbjct: 221 SRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM 280
Query: 339 SNEQVLNWVKGKSSNEYKVNPPISL 363
++E+V+ +V+ + N P+ L
Sbjct: 281 AHEEVIYYVRDGNILACPENCPLEL 305
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 194 bits (493), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 98/252 (38%), Positives = 150/252 (59%), Gaps = 11/252 (4%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDF-RSLAEHPCAIKVANENASEREKAEFLN 171
D EV R +T++ LG+G+FG VY G + + A+K E SE+++ +FL
Sbjct: 24 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 83
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
EA ++ F+ ++V+ GV + P +++ELM GGDLK++LR RP + S +
Sbjct: 84 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS---QPSSLAM 140
Query: 232 SRILQMAAEVADGMAYLADKKFVHRDLAARNCMV---ADDLTVKVGDFGMTRDIYETEYY 288
+L +A ++A G YL + F+HRD+AARNC++ K+GDFGM +DIY YY
Sbjct: 141 LDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYY 200
Query: 289 RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVK 348
RKG LPV+WM PE+ +G+FTS +D WS+GV+LWE+ +L PY SN++VL +V
Sbjct: 201 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT 260
Query: 349 GKSSNEYKVNPP 360
+++PP
Sbjct: 261 SGG----RMDPP 268
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/252 (38%), Positives = 149/252 (59%), Gaps = 11/252 (4%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDF-RSLAEHPCAIKVANENASEREKAEFLN 171
D EV R +T++ LG+G+FG VY G + + A+K E SE+++ +FL
Sbjct: 38 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 97
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
EA ++ + ++V+ GV + P +++ELM GGDLK++LR RP + S +
Sbjct: 98 EALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS---QPSSLAM 154
Query: 232 SRILQMAAEVADGMAYLADKKFVHRDLAARNCMV---ADDLTVKVGDFGMTRDIYETEYY 288
+L +A ++A G YL + F+HRD+AARNC++ K+GDFGM RDIY YY
Sbjct: 155 LDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 214
Query: 289 RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVK 348
RKG LPV+WM PE+ +G+FTS +D WS+GV+LWE+ +L PY SN++VL +V
Sbjct: 215 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT 274
Query: 349 GKSSNEYKVNPP 360
+++PP
Sbjct: 275 SGG----RMDPP 282
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 193 bits (490), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/252 (38%), Positives = 149/252 (59%), Gaps = 11/252 (4%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDF-RSLAEHPCAIKVANENASEREKAEFLN 171
D EV R +T++ LG+G+FG VY G + + A+K E SE+++ +FL
Sbjct: 24 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 83
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
EA ++ + ++V+ GV + P +++ELM GGDLK++LR RP + S +
Sbjct: 84 EALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS---QPSSLAM 140
Query: 232 SRILQMAAEVADGMAYLADKKFVHRDLAARNCMV---ADDLTVKVGDFGMTRDIYETEYY 288
+L +A ++A G YL + F+HRD+AARNC++ K+GDFGM RDIY YY
Sbjct: 141 LDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 200
Query: 289 RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVK 348
RKG LPV+WM PE+ +G+FTS +D WS+GV+LWE+ +L PY SN++VL +V
Sbjct: 201 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT 260
Query: 349 GKSSNEYKVNPP 360
+++PP
Sbjct: 261 SGG----RMDPP 268
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 184 bits (467), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 102/265 (38%), Positives = 151/265 (56%), Gaps = 27/265 (10%)
Query: 105 DDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPC-AIKVANENASE 163
D K+ + WE R + + LG G FG V + + A + A+K+ ENAS
Sbjct: 8 DAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASP 67
Query: 164 REKAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCR------ 217
E + L+E +V+K + HV+KLYG S+ P L+I+E G L+ +LR R
Sbjct: 68 SELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGY 127
Query: 218 --------------PDAETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNC 263
PD ER+ T+ ++ A +++ GM YLA+ K VHRDLAARN
Sbjct: 128 LGSGGSRNSSSLDHPD-----ERAL-TMGDLISFAWQISQGMQYLAEMKLVHRDLAARNI 181
Query: 264 MVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVV 323
+VA+ +K+ DFG++RD+YE + Y K S+G +PV+WMA ESL D ++T+ SDVWS+GV+
Sbjct: 182 LVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVL 241
Query: 324 LWEMATLASQPYQGLSNEQVLNWVK 348
LWE+ TL PY G+ E++ N +K
Sbjct: 242 LWEIVTLGGNPYPGIPPERLFNLLK 266
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 181 bits (459), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 101/265 (38%), Positives = 150/265 (56%), Gaps = 27/265 (10%)
Query: 105 DDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPC-AIKVANENASE 163
D K+ + WE R + + LG G FG V + + A + A+K+ ENAS
Sbjct: 8 DAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASP 67
Query: 164 REKAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCR------ 217
E + L+E +V+K + HV+KLYG S+ P L+I+E G L+ +LR R
Sbjct: 68 SELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGY 127
Query: 218 --------------PDAETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNC 263
PD ER+ T+ ++ A +++ GM YLA+ K VHRDLAARN
Sbjct: 128 LGSGGSRNSSSLDHPD-----ERAL-TMGDLISFAWQISQGMQYLAEMKLVHRDLAARNI 181
Query: 264 MVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVV 323
+VA+ +K+ DFG++RD+YE + K S+G +PV+WMA ESL D ++T+ SDVWS+GV+
Sbjct: 182 LVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVL 241
Query: 324 LWEMATLASQPYQGLSNEQVLNWVK 348
LWE+ TL PY G+ E++ N +K
Sbjct: 242 LWEIVTLGGNPYPGIPPERLFNLLK 266
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 181 bits (458), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 97/259 (37%), Positives = 154/259 (59%), Gaps = 12/259 (4%)
Query: 101 LMGGDDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYR----GLIKDFRSLAEHPCAIKV 156
L G + +L + WE R K+T+ LG G+FG V G+ KD + A+K+
Sbjct: 16 LAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKD-KPKEAVTVAVKM 74
Query: 157 ANENASEREKAEFLNEASVMKAFDTH-HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRS 215
++A+E++ ++ ++E +MK H +++ L G ++ P VI+E G+L+ YLR+
Sbjct: 75 LKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRA 134
Query: 216 CRP---DAETDVERSPP---TLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDL 269
RP + D+ R P T ++ ++A GM YLA +K +HRDLAARN +V ++
Sbjct: 135 RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN 194
Query: 270 TVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
+K+ DFG+ RDI +YY+K + G LPV+WMAPE+L D V+T SDVWS+GV++WE+ T
Sbjct: 195 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 330 LASQPYQGLSNEQVLNWVK 348
L PY G+ E++ +K
Sbjct: 255 LGGSPYPGIPVEELFKLLK 273
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 180 bits (457), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 98/259 (37%), Positives = 153/259 (59%), Gaps = 12/259 (4%)
Query: 101 LMGGDDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYR----GLIKDFRSLAEHPCAIKV 156
L G + +L + WE R K+T+ LG G FG V G+ KD A A+K+
Sbjct: 62 LAGVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVT-VAVKM 120
Query: 157 ANENASEREKAEFLNEASVMKAFDTH-HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRS 215
++A+E++ ++ ++E +MK H +++ L G ++ P VI+E G+L+ YLR+
Sbjct: 121 LKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA 180
Query: 216 CRP---DAETDVERSPP---TLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDL 269
RP + D+ R P T ++ ++A GM YLA +K +HRDLAARN +V ++
Sbjct: 181 RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN 240
Query: 270 TVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
+K+ DFG+ RDI +YY+K + G LPV+WMAPE+L D V+T SDVWS+GV++WE+ T
Sbjct: 241 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
Query: 330 LASQPYQGLSNEQVLNWVK 348
L PY G+ E++ +K
Sbjct: 301 LGGSPYPGIPVEELFKLLK 319
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 180 bits (457), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 97/259 (37%), Positives = 154/259 (59%), Gaps = 12/259 (4%)
Query: 101 LMGGDDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYR----GLIKDFRSLAEHPCAIKV 156
L G + +L + WE R K+T+ LG G+FG V G+ KD + A+K+
Sbjct: 16 LAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKD-KPKEAVTVAVKM 74
Query: 157 ANENASEREKAEFLNEASVMKAFDTH-HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRS 215
++A+E++ ++ ++E +MK H +++ L G ++ P VI+E G+L+ YLR+
Sbjct: 75 LKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRA 134
Query: 216 CRP---DAETDVERSPP---TLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDL 269
RP + D+ R P T ++ ++A GM YLA +K +HRDLAARN +V ++
Sbjct: 135 RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN 194
Query: 270 TVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
+K+ DFG+ RDI +YY+K + G LPV+WMAPE+L D V+T SDVWS+GV++WE+ T
Sbjct: 195 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 330 LASQPYQGLSNEQVLNWVK 348
L PY G+ E++ +K
Sbjct: 255 LGGSPYPGIPVEELFKLLK 273
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 180 bits (456), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 97/259 (37%), Positives = 153/259 (59%), Gaps = 12/259 (4%)
Query: 101 LMGGDDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYR----GLIKDFRSLAEHPCAIKV 156
L G + +L + WE R K+T+ LG G FG V G+ KD + A+K+
Sbjct: 5 LAGVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKD-KPKEAVTVAVKM 63
Query: 157 ANENASEREKAEFLNEASVMKAFDTH-HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRS 215
++A+E++ ++ ++E +MK H +++ L G ++ P VI+E G+L+ YLR+
Sbjct: 64 LKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA 123
Query: 216 CRP---DAETDVERSPP---TLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDL 269
RP + D+ R P T ++ ++A GM YLA +K +HRDLAARN +V ++
Sbjct: 124 RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN 183
Query: 270 TVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
+K+ DFG+ RDI +YY+K + G LPV+WMAPE+L D V+T SDVWS+GV++WE+ T
Sbjct: 184 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
Query: 330 LASQPYQGLSNEQVLNWVK 348
L PY G+ E++ +K
Sbjct: 244 LGGSPYPGIPVEELFKLLK 262
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 179 bits (455), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 97/259 (37%), Positives = 153/259 (59%), Gaps = 12/259 (4%)
Query: 101 LMGGDDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYR----GLIKDFRSLAEHPCAIKV 156
L G + +L + WE R K+T+ LG G FG V G+ KD + A+K+
Sbjct: 8 LAGVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKD-KPKEAVTVAVKM 66
Query: 157 ANENASEREKAEFLNEASVMKAFDTH-HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRS 215
++A+E++ ++ ++E +MK H +++ L G ++ P VI+E G+L+ YLR+
Sbjct: 67 LKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA 126
Query: 216 CRP---DAETDVERSPP---TLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDL 269
RP + D+ R P T ++ ++A GM YLA +K +HRDLAARN +V ++
Sbjct: 127 RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN 186
Query: 270 TVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
+K+ DFG+ RDI +YY+K + G LPV+WMAPE+L D V+T SDVWS+GV++WE+ T
Sbjct: 187 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
Query: 330 LASQPYQGLSNEQVLNWVK 348
L PY G+ E++ +K
Sbjct: 247 LGGSPYPGIPVEELFKLLK 265
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 97/259 (37%), Positives = 153/259 (59%), Gaps = 12/259 (4%)
Query: 101 LMGGDDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYR----GLIKDFRSLAEHPCAIKV 156
L G + +L + WE R K+T+ LG G+FG V G+ KD + A+K+
Sbjct: 16 LAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKD-KPKEAVTVAVKM 74
Query: 157 ANENASEREKAEFLNEASVMKAFDTH-HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRS 215
++A+E + ++ ++E +MK H +++ L G ++ P VI+E G+L+ YLR+
Sbjct: 75 LKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA 134
Query: 216 CRP---DAETDVERSPP---TLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDL 269
RP + D+ R P T ++ ++A GM YLA +K +HRDLAARN +V ++
Sbjct: 135 RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN 194
Query: 270 TVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
+K+ DFG+ RDI +YY+K + G LPV+WMAPE+L D V+T SDVWS+GV++WE+ T
Sbjct: 195 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 330 LASQPYQGLSNEQVLNWVK 348
L PY G+ E++ +K
Sbjct: 255 LGGSPYPGIPVEELFKLLK 273
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/259 (37%), Positives = 154/259 (59%), Gaps = 12/259 (4%)
Query: 101 LMGGDDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYR----GLIKDFRSLAEHPCAIKV 156
L G + +L + WE R K+T+ LG G+FG V G+ KD + A+K+
Sbjct: 16 LAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKD-KPKEAVTVAVKM 74
Query: 157 ANENASEREKAEFLNEASVMKAFDTH-HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRS 215
++A+E++ ++ ++E +MK H +++ L G ++ P VI+E G+L+ YLR+
Sbjct: 75 LKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA 134
Query: 216 CRP---DAETDVERSPP---TLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDL 269
RP + D+ R P T ++ ++A GM YLA +K +HRDLAARN +V ++
Sbjct: 135 RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN 194
Query: 270 TVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
+++ DFG+ RDI +YY+K + G LPV+WMAPE+L D V+T SDVWS+GV++WE+ T
Sbjct: 195 VMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 330 LASQPYQGLSNEQVLNWVK 348
L PY G+ E++ +K
Sbjct: 255 LGGSPYPGIPVEELFKLLK 273
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 100/230 (43%), Positives = 144/230 (62%), Gaps = 19/230 (8%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVAN-----ENASEREKAEFLNEASVMKAFDTH 182
LG G FG V G +K E ++KVA +N+S+RE EFL+EA+ MK F
Sbjct: 42 LGEGEFGSVMEGNLKQ-----EDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHP 96
Query: 183 HVVKLYGVV----SEGNPT-LVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQM 237
+V++L GV S+G P +VI+ M GDL YL R ET + P L +L+
Sbjct: 97 NVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSR--LETGPKHIP--LQTLLKF 152
Query: 238 AAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLP 297
++A GM YL+++ F+HRDLAARNCM+ DD+TV V DFG+++ IY +YYR+G +P
Sbjct: 153 MVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMP 212
Query: 298 VRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV 347
V+W+A ESL D V+TS SDVW++GV +WE+AT PY G+ N ++ +++
Sbjct: 213 VKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYL 262
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 100/265 (37%), Positives = 149/265 (56%), Gaps = 27/265 (10%)
Query: 105 DDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPC-AIKVANENASE 163
D K+ + WE R + + LG G FG V + + A + A+K+ ENAS
Sbjct: 8 DAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASP 67
Query: 164 REKAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCR------ 217
E + L+E +V+K + HV+KLYG S+ P L+I+E G L+ +LR R
Sbjct: 68 SELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGY 127
Query: 218 --------------PDAETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNC 263
PD ER+ T+ ++ A +++ GM YLA+ VHRDLAARN
Sbjct: 128 LGSGGSRNSSSLDHPD-----ERAL-TMGDLISFAWQISQGMQYLAEMSLVHRDLAARNI 181
Query: 264 MVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVV 323
+VA+ +K+ DFG++RD+YE + K S+G +PV+WMA ESL D ++T+ SDVWS+GV+
Sbjct: 182 LVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVL 241
Query: 324 LWEMATLASQPYQGLSNEQVLNWVK 348
LWE+ TL PY G+ E++ N +K
Sbjct: 242 LWEIVTLGGNPYPGIPPERLFNLLK 266
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 96/259 (37%), Positives = 153/259 (59%), Gaps = 12/259 (4%)
Query: 101 LMGGDDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYR----GLIKDFRSLAEHPCAIKV 156
L G + +L + WE R K+T+ LG G+FG V G+ KD + A+K+
Sbjct: 16 LAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKD-KPKEAVTVAVKM 74
Query: 157 ANENASEREKAEFLNEASVMKAFDTH-HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRS 215
++A+E++ ++ ++E +MK H +++ L G ++ P VI+E G+L+ YLR+
Sbjct: 75 LKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA 134
Query: 216 CRP---DAETDVERSPP---TLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDL 269
RP + D+ R P T ++ ++A GM YLA +K +HRDLAARN +V ++
Sbjct: 135 RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN 194
Query: 270 TVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
+K+ DFG+ RDI +YY+ + G LPV+WMAPE+L D V+T SDVWS+GV++WE+ T
Sbjct: 195 VMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 330 LASQPYQGLSNEQVLNWVK 348
L PY G+ E++ +K
Sbjct: 255 LGGSPYPGIPVEELFKLLK 273
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 96/259 (37%), Positives = 152/259 (58%), Gaps = 12/259 (4%)
Query: 101 LMGGDDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYR----GLIKDFRSLAEHPCAIKV 156
L G + +L + WE R K+T+ LG G FG V G+ KD + A+K+
Sbjct: 3 LAGVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKD-KPKEAVTVAVKM 61
Query: 157 ANENASEREKAEFLNEASVMKAFDTH-HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRS 215
++A+E++ ++ ++E +MK H +++ L G ++ P VI+E G+L+ YLR+
Sbjct: 62 LKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA 121
Query: 216 CRP---DAETDVERSPP---TLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDL 269
RP + D+ R P T ++ ++A GM YLA +K +HRDL ARN +V ++
Sbjct: 122 RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENN 181
Query: 270 TVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
+K+ DFG+ RDI +YY+K + G LPV+WMAPE+L D V+T SDVWS+GV++WE+ T
Sbjct: 182 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
Query: 330 LASQPYQGLSNEQVLNWVK 348
L PY G+ E++ +K
Sbjct: 242 LGGSPYPGIPVEELFKLLK 260
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 178 bits (451), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 96/259 (37%), Positives = 153/259 (59%), Gaps = 12/259 (4%)
Query: 101 LMGGDDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYR----GLIKDFRSLAEHPCAIKV 156
L G + +L + WE R K+T+ LG G+FG V G+ KD + A+K+
Sbjct: 16 LAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKD-KPKEAVTVAVKM 74
Query: 157 ANENASEREKAEFLNEASVMKAFDTH-HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRS 215
++A+E++ ++ ++E +MK H +++ L G ++ P VI+ G+L+ YLR+
Sbjct: 75 LKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRA 134
Query: 216 CRP---DAETDVERSPP---TLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDL 269
RP + D+ R P T ++ ++A GM YLA +K +HRDLAARN +V ++
Sbjct: 135 RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN 194
Query: 270 TVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
+K+ DFG+ RDI +YY+K + G LPV+WMAPE+L D V+T SDVWS+GV++WE+ T
Sbjct: 195 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 330 LASQPYQGLSNEQVLNWVK 348
L PY G+ E++ +K
Sbjct: 255 LGGSPYPGIPVEELFKLLK 273
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 178 bits (451), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 99/249 (39%), Positives = 145/249 (58%), Gaps = 14/249 (5%)
Query: 102 MGGDDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENA 161
MG D ++ K + E+ S VT +G G FG VY+G++K E P AIK
Sbjct: 26 MGSDPNQAVLKFTTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY 85
Query: 162 SEREKAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAE 221
+E+++ +FL EA +M F H++++L GV+S+ P ++I E M G L +LR E
Sbjct: 86 TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLR------E 139
Query: 222 TDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTR- 280
D E S + +++ M +A GM YLA+ +VHRDLAARN +V +L KV DFG++R
Sbjct: 140 KDGEFS---VLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRV 196
Query: 281 --DIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGL 338
D E Y G G +P+RW APE++ FTS SDVWS+G+V+WE+ T +PY L
Sbjct: 197 LEDDPEATYTTSG--GKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWEL 254
Query: 339 SNEQVLNWV 347
SN +V+ +
Sbjct: 255 SNHEVMKAI 263
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 177 bits (450), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 97/214 (45%), Positives = 132/214 (61%), Gaps = 19/214 (8%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
+G G FG VY G + D H CA+K N E ++FL E +MK F +V+ L
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIH-CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 115
Query: 188 YGVV--SEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
G+ SEG+P LV++ M GDL+N++R+ E PT+ ++ +VA GM
Sbjct: 116 LGICLRSEGSP-LVVLPYMKHGDLRNFIRN---------ETHNPTVKDLIGFGLQVAKGM 165
Query: 246 AYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY----RKGSRGFLPVRWM 301
YLA KKFVHRDLAARNCM+ + TVKV DFG+ RD+Y+ EYY + G++ LPV+WM
Sbjct: 166 KYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK--LPVKWM 223
Query: 302 APESLKDGVFTSHSDVWSYGVVLWEMATLASQPY 335
A ESL+ FT+ SDVWS+GV+LWE+ T + PY
Sbjct: 224 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 257
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 177 bits (450), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 96/259 (37%), Positives = 153/259 (59%), Gaps = 12/259 (4%)
Query: 101 LMGGDDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYR----GLIKDFRSLAEHPCAIKV 156
L G + +L + WE R K+T+ LG G+FG V G+ KD + A+K+
Sbjct: 16 LAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKD-KPKEAVTVAVKM 74
Query: 157 ANENASEREKAEFLNEASVMKAFDTH-HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRS 215
++A+E++ ++ ++E +MK H +++ L G ++ P VI+ G+L+ YLR+
Sbjct: 75 LKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRA 134
Query: 216 CRP---DAETDVERSPP---TLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDL 269
RP + D+ R P T ++ ++A GM YLA +K +HRDLAARN +V ++
Sbjct: 135 RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN 194
Query: 270 TVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
+K+ DFG+ RDI +YY+K + G LPV+WMAPE+L D V+T SDVWS+GV++WE+ T
Sbjct: 195 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 330 LASQPYQGLSNEQVLNWVK 348
L PY G+ E++ +K
Sbjct: 255 LGGSPYPGIPVEELFKLLK 273
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 177 bits (450), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 97/214 (45%), Positives = 132/214 (61%), Gaps = 19/214 (8%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
+G G FG VY G + D H CA+K N E ++FL E +MK F +V+ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIH-CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 188 YGVV--SEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
G+ SEG+P LV++ M GDL+N++R+ E PT+ ++ +VA GM
Sbjct: 97 LGICLRSEGSP-LVVLPYMKHGDLRNFIRN---------ETHNPTVKDLIGFGLQVAKGM 146
Query: 246 AYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY----RKGSRGFLPVRWM 301
YLA KKFVHRDLAARNCM+ + TVKV DFG+ RD+Y+ EYY + G++ LPV+WM
Sbjct: 147 KYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK--LPVKWM 204
Query: 302 APESLKDGVFTSHSDVWSYGVVLWEMATLASQPY 335
A ESL+ FT+ SDVWS+GV+LWE+ T + PY
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 238
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 177 bits (450), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 97/214 (45%), Positives = 132/214 (61%), Gaps = 19/214 (8%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
+G G FG VY G + D H CA+K N E ++FL E +MK F +V+ L
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIH-CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 88
Query: 188 YGVV--SEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
G+ SEG+P LV++ M GDL+N++R+ E PT+ ++ +VA GM
Sbjct: 89 LGICLRSEGSP-LVVLPYMKHGDLRNFIRN---------ETHNPTVKDLIGFGLQVAKGM 138
Query: 246 AYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY----RKGSRGFLPVRWM 301
YLA KKFVHRDLAARNCM+ + TVKV DFG+ RD+Y+ EYY + G++ LPV+WM
Sbjct: 139 KYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK--LPVKWM 196
Query: 302 APESLKDGVFTSHSDVWSYGVVLWEMATLASQPY 335
A ESL+ FT+ SDVWS+GV+LWE+ T + PY
Sbjct: 197 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 230
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 177 bits (450), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 97/214 (45%), Positives = 132/214 (61%), Gaps = 19/214 (8%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
+G G FG VY G + D H CA+K N E ++FL E +MK F +V+ L
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIH-CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 114
Query: 188 YGVV--SEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
G+ SEG+P LV++ M GDL+N++R+ E PT+ ++ +VA GM
Sbjct: 115 LGICLRSEGSP-LVVLPYMKHGDLRNFIRN---------ETHNPTVKDLIGFGLQVAKGM 164
Query: 246 AYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY----RKGSRGFLPVRWM 301
YLA KKFVHRDLAARNCM+ + TVKV DFG+ RD+Y+ EYY + G++ LPV+WM
Sbjct: 165 KYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK--LPVKWM 222
Query: 302 APESLKDGVFTSHSDVWSYGVVLWEMATLASQPY 335
A ESL+ FT+ SDVWS+GV+LWE+ T + PY
Sbjct: 223 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 256
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 177 bits (449), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 97/214 (45%), Positives = 132/214 (61%), Gaps = 19/214 (8%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
+G G FG VY G + D H CA+K N E ++FL E +MK F +V+ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIH-CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 188 YGVV--SEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
G+ SEG+P LV++ M GDL+N++R+ E PT+ ++ +VA GM
Sbjct: 97 LGICLRSEGSP-LVVLPYMKHGDLRNFIRN---------ETHNPTVKDLIGFGLQVAKGM 146
Query: 246 AYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY----RKGSRGFLPVRWM 301
YLA KKFVHRDLAARNCM+ + TVKV DFG+ RD+Y+ EYY + G++ LPV+WM
Sbjct: 147 KYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK--LPVKWM 204
Query: 302 APESLKDGVFTSHSDVWSYGVVLWEMATLASQPY 335
A ESL+ FT+ SDVWS+GV+LWE+ T + PY
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 238
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 177 bits (449), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 97/214 (45%), Positives = 132/214 (61%), Gaps = 19/214 (8%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
+G G FG VY G + D H CA+K N E ++FL E +MK F +V+ L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIH-CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 188 YGVV--SEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
G+ SEG+P LV++ M GDL+N++R+ E PT+ ++ +VA GM
Sbjct: 96 LGICLRSEGSP-LVVLPYMKHGDLRNFIRN---------ETHNPTVKDLIGFGLQVAKGM 145
Query: 246 AYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY----RKGSRGFLPVRWM 301
YLA KKFVHRDLAARNCM+ + TVKV DFG+ RD+Y+ EYY + G++ LPV+WM
Sbjct: 146 KYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK--LPVKWM 203
Query: 302 APESLKDGVFTSHSDVWSYGVVLWEMATLASQPY 335
A ESL+ FT+ SDVWS+GV+LWE+ T + PY
Sbjct: 204 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 237
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 177 bits (449), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 96/259 (37%), Positives = 154/259 (59%), Gaps = 12/259 (4%)
Query: 101 LMGGDDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYR----GLIKDFRSLAEHPCAIKV 156
L G + +L + WE+ R ++ + LG G+FG V GL KD + A+K+
Sbjct: 50 LAGVSEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTK-VAVKM 108
Query: 157 ANENASEREKAEFLNEASVMKAFDTH-HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRS 215
+A+E++ ++ ++E +MK H +++ L G ++ P VI+E G+L+ YL++
Sbjct: 109 LKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQA 168
Query: 216 CRP---DAETDVERSPP---TLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDL 269
RP + + +P + ++ A +VA GM YLA KK +HRDLAARN +V +D
Sbjct: 169 RRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN 228
Query: 270 TVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
+K+ DFG+ RDI+ +YY+K + G LPV+WMAPE+L D ++T SDVWS+GV+LWE+ T
Sbjct: 229 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
Query: 330 LASQPYQGLSNEQVLNWVK 348
L PY G+ E++ +K
Sbjct: 289 LGGSPYPGVPVEELFKLLK 307
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 177 bits (449), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 97/214 (45%), Positives = 132/214 (61%), Gaps = 19/214 (8%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
+G G FG VY G + D H CA+K N E ++FL E +MK F +V+ L
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIH-CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 93
Query: 188 YGVV--SEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
G+ SEG+P LV++ M GDL+N++R+ E PT+ ++ +VA GM
Sbjct: 94 LGICLRSEGSP-LVVLPYMKHGDLRNFIRN---------ETHNPTVKDLIGFGLQVAKGM 143
Query: 246 AYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY----RKGSRGFLPVRWM 301
YLA KKFVHRDLAARNCM+ + TVKV DFG+ RD+Y+ EYY + G++ LPV+WM
Sbjct: 144 KYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK--LPVKWM 201
Query: 302 APESLKDGVFTSHSDVWSYGVVLWEMATLASQPY 335
A ESL+ FT+ SDVWS+GV+LWE+ T + PY
Sbjct: 202 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 235
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 177 bits (449), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 97/214 (45%), Positives = 132/214 (61%), Gaps = 19/214 (8%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
+G G FG VY G + D H CA+K N E ++FL E +MK F +V+ L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIH-CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 188 YGVV--SEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
G+ SEG+P LV++ M GDL+N++R+ E PT+ ++ +VA GM
Sbjct: 95 LGICLRSEGSP-LVVLPYMKHGDLRNFIRN---------ETHNPTVKDLIGFGLQVAKGM 144
Query: 246 AYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY----RKGSRGFLPVRWM 301
YLA KKFVHRDLAARNCM+ + TVKV DFG+ RD+Y+ EYY + G++ LPV+WM
Sbjct: 145 KYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK--LPVKWM 202
Query: 302 APESLKDGVFTSHSDVWSYGVVLWEMATLASQPY 335
A ESL+ FT+ SDVWS+GV+LWE+ T + PY
Sbjct: 203 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 236
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 97/214 (45%), Positives = 132/214 (61%), Gaps = 19/214 (8%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
+G G FG VY G + D H CA+K N E ++FL E +MK F +V+ L
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIH-CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 91
Query: 188 YGVV--SEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
G+ SEG+P LV++ M GDL+N++R+ E PT+ ++ +VA GM
Sbjct: 92 LGICLRSEGSP-LVVLPYMKHGDLRNFIRN---------ETHNPTVKDLIGFGLQVAKGM 141
Query: 246 AYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY----RKGSRGFLPVRWM 301
YLA KKFVHRDLAARNCM+ + TVKV DFG+ RD+Y+ EYY + G++ LPV+WM
Sbjct: 142 KYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK--LPVKWM 199
Query: 302 APESLKDGVFTSHSDVWSYGVVLWEMATLASQPY 335
A ESL+ FT+ SDVWS+GV+LWE+ T + PY
Sbjct: 200 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 233
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/256 (37%), Positives = 153/256 (59%), Gaps = 12/256 (4%)
Query: 104 GDDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYR----GLIKDFRSLAEHPCAIKVANE 159
G + +L + WE+ R ++ + LG G+FG V GL KD + A+K+
Sbjct: 1 GSEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTK-VAVKMLKS 59
Query: 160 NASEREKAEFLNEASVMKAFDTH-HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRP 218
+A+E++ ++ ++E +MK H +++ L G ++ P VI+E G+L+ YL++ RP
Sbjct: 60 DATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRP 119
Query: 219 ---DAETDVERSPP---TLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVK 272
+ + +P + ++ A +VA GM YLA KK +HRDLAARN +V +D +K
Sbjct: 120 PGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMK 179
Query: 273 VGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLAS 332
+ DFG+ RDI+ +YY+K + G LPV+WMAPE+L D ++T SDVWS+GV+LWE+ TL
Sbjct: 180 IADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 239
Query: 333 QPYQGLSNEQVLNWVK 348
PY G+ E++ +K
Sbjct: 240 SPYPGVPVEELFKLLK 255
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/259 (36%), Positives = 154/259 (59%), Gaps = 12/259 (4%)
Query: 101 LMGGDDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYR----GLIKDFRSLAEHPCAIKV 156
+ G + +L + WE+ R ++ + LG G+FG V GL KD + A+K+
Sbjct: 9 MAGVSEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTK-VAVKM 67
Query: 157 ANENASEREKAEFLNEASVMKAFDTH-HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRS 215
+A+E++ ++ ++E +MK H +++ L G ++ P VI+E G+L+ YL++
Sbjct: 68 LKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQA 127
Query: 216 CRP---DAETDVERSPP---TLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDL 269
RP + + +P + ++ A +VA GM YLA KK +HRDLAARN +V +D
Sbjct: 128 RRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN 187
Query: 270 TVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
+K+ DFG+ RDI+ +YY+K + G LPV+WMAPE+L D ++T SDVWS+GV+LWE+ T
Sbjct: 188 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
Query: 330 LASQPYQGLSNEQVLNWVK 348
L PY G+ E++ +K
Sbjct: 248 LGGSPYPGVPVEELFKLLK 266
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 176 bits (445), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/245 (37%), Positives = 148/245 (60%), Gaps = 12/245 (4%)
Query: 115 WEVLRSKVTILDELGNGSFGLVYR----GLIKDFRSLAEHPCAIKVANENASEREKAEFL 170
WE+ R ++ + LG G+FG V GL KD + A+K+ +A+E++ ++ +
Sbjct: 15 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTK-VAVKMLKSDATEKDLSDLI 73
Query: 171 NEASVMKAFDTH-HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRP---DAETDVER 226
+E +MK H +++ L G ++ P VI+E G+L+ YL++ RP + +
Sbjct: 74 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSH 133
Query: 227 SPP---TLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIY 283
+P + ++ A +VA GM YLA KK +HRDLAARN +V +D +K+ DFG+ RDI+
Sbjct: 134 NPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 193
Query: 284 ETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
+YY+K + G LPV+WMAPE+L D ++T SDVWS+GV+LWE+ TL PY G+ E++
Sbjct: 194 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 253
Query: 344 LNWVK 348
+K
Sbjct: 254 FKLLK 258
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 93/245 (37%), Positives = 148/245 (60%), Gaps = 12/245 (4%)
Query: 115 WEVLRSKVTILDELGNGSFGLVYR----GLIKDFRSLAEHPCAIKVANENASEREKAEFL 170
WE+ R ++ + LG G+FG V GL KD + A+K+ +A+E++ ++ +
Sbjct: 16 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTK-VAVKMLKSDATEKDLSDLI 74
Query: 171 NEASVMKAFDTH-HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRP---DAETDVER 226
+E +MK H +++ L G ++ P VI+E G+L+ YL++ RP + +
Sbjct: 75 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSH 134
Query: 227 SPP---TLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIY 283
+P + ++ A +VA GM YLA KK +HRDLAARN +V +D +K+ DFG+ RDI+
Sbjct: 135 NPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 194
Query: 284 ETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
+YY+K + G LPV+WMAPE+L D ++T SDVWS+GV+LWE+ TL PY G+ E++
Sbjct: 195 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 254
Query: 344 LNWVK 348
+K
Sbjct: 255 FKLLK 259
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 175 bits (443), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 95/259 (36%), Positives = 153/259 (59%), Gaps = 12/259 (4%)
Query: 101 LMGGDDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYR----GLIKDFRSLAEHPCAIKV 156
+ G + +L + WE+ R ++ + LG G+FG V GL KD + A+K+
Sbjct: 9 MAGVSEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTK-VAVKM 67
Query: 157 ANENASEREKAEFLNEASVMKAFDTH-HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRS 215
+A+E++ ++ ++E +MK H +++ L G ++ P VI+E G+L+ YL++
Sbjct: 68 LKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQA 127
Query: 216 CRPDAET---DVERSPP---TLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDL 269
RP + +P + ++ A +VA GM YLA KK +HRDLAARN +V +D
Sbjct: 128 RRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN 187
Query: 270 TVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
+K+ DFG+ RDI+ +YY+K + G LPV+WMAPE+L D ++T SDVWS+GV+LWE+ T
Sbjct: 188 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
Query: 330 LASQPYQGLSNEQVLNWVK 348
L PY G+ E++ +K
Sbjct: 248 LGGSPYPGVPVEELFKLLK 266
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 174 bits (442), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 95/259 (36%), Positives = 152/259 (58%), Gaps = 12/259 (4%)
Query: 101 LMGGDDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYR----GLIKDFRSLAEHPCAIKV 156
L G + +L + WE R K+T+ LG G+FG V G+ KD + A+K+
Sbjct: 16 LAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKD-KPKEAVTVAVKM 74
Query: 157 ANENASEREKAEFLNEASVMKAFDTH-HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRS 215
++A+E++ ++ ++E +MK H +++ L G ++ P VI+E G+L+ YLR+
Sbjct: 75 LKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA 134
Query: 216 CRP---DAETDVERSPP---TLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDL 269
RP + D+ R P T ++ ++A GM YLA +K +HRDLAARN +V ++
Sbjct: 135 RRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN 194
Query: 270 TVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
+K+ DFG+ RDI + +K + G LPV+WMAPE+L D V+T SDVWS+GV++WE+ T
Sbjct: 195 VMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 330 LASQPYQGLSNEQVLNWVK 348
L PY G+ E++ +K
Sbjct: 255 LGGSPYPGIPVEELFKLLK 273
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 174 bits (442), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 93/245 (37%), Positives = 147/245 (60%), Gaps = 12/245 (4%)
Query: 115 WEVLRSKVTILDELGNGSFGLVYR----GLIKDFRSLAEHPCAIKVANENASEREKAEFL 170
WE+ R ++ + LG G+FG V GL KD + A+K+ +A+E++ ++ +
Sbjct: 8 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTK-VAVKMLKSDATEKDLSDLI 66
Query: 171 NEASVMKAFDTH-HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAET---DVER 226
+E +MK H +++ L G ++ P VI+E G+L+ YL++ RP +
Sbjct: 67 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSH 126
Query: 227 SPP---TLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIY 283
+P + ++ A +VA GM YLA KK +HRDLAARN +V +D +K+ DFG+ RDI+
Sbjct: 127 NPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 186
Query: 284 ETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
+YY+K + G LPV+WMAPE+L D ++T SDVWS+GV+LWE+ TL PY G+ E++
Sbjct: 187 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 246
Query: 344 LNWVK 348
+K
Sbjct: 247 FKLLK 251
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 174 bits (441), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 95/259 (36%), Positives = 152/259 (58%), Gaps = 12/259 (4%)
Query: 101 LMGGDDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYR----GLIKDFRSLAEHPCAIKV 156
L G + +L + WE R K+T+ LG G+FG V G+ KD + A+K+
Sbjct: 16 LAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKD-KPKEAVTVAVKM 74
Query: 157 ANENASEREKAEFLNEASVMKAFDTH-HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRS 215
++A+E++ ++ ++E +MK H +++ L G ++ P VI+E G+L+ YLR+
Sbjct: 75 LKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA 134
Query: 216 CRP---DAETDVERSPP---TLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDL 269
RP + D+ R P T ++ ++A GM YLA +K +HRDLAARN +V ++
Sbjct: 135 RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN 194
Query: 270 TVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
+K+ DFG+ RDI + +K + G LPV+WMAPE+L D V+T SDVWS+GV++WE+ T
Sbjct: 195 VMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 330 LASQPYQGLSNEQVLNWVK 348
L PY G+ E++ +K
Sbjct: 255 LGGSPYPGIPVEELFKLLK 273
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/259 (36%), Positives = 153/259 (59%), Gaps = 12/259 (4%)
Query: 101 LMGGDDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYR----GLIKDFRSLAEHPCAIKV 156
+ G + +L + WE+ R ++ + LG G+FG V GL KD + A+K+
Sbjct: 9 MAGVSEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTK-VAVKM 67
Query: 157 ANENASEREKAEFLNEASVMKAFDTH-HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRS 215
+A+E++ ++ ++E +MK H +++ L G ++ P VI+E G+L+ YL++
Sbjct: 68 LKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQA 127
Query: 216 CRP---DAETDVERSPP---TLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDL 269
P + + +P + ++ A +VA GM YLA KK +HRDLAARN +V +D
Sbjct: 128 REPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN 187
Query: 270 TVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
+K+ DFG+ RDI+ +YY+K + G LPV+WMAPE+L D ++T SDVWS+GV+LWE+ T
Sbjct: 188 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
Query: 330 LASQPYQGLSNEQVLNWVK 348
L PY G+ E++ +K
Sbjct: 248 LGGSPYPGVPVEELFKLLK 266
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 95/214 (44%), Positives = 131/214 (61%), Gaps = 19/214 (8%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
+G G FG VY G + D H CA+K N E ++FL E +MK F +V+ L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIH-CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 188 YGVV--SEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
G+ SEG+P LV++ M GDL+N++R+ E PT+ ++ +VA GM
Sbjct: 96 LGICLRSEGSP-LVVLPYMKHGDLRNFIRN---------ETHNPTVKDLIGFGLQVAKGM 145
Query: 246 AYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETE----YYRKGSRGFLPVRWM 301
YLA KKFVHRDLAARNCM+ + TVKV DFG+ RD+Y+ E + + G++ LPV+WM
Sbjct: 146 KYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAK--LPVKWM 203
Query: 302 APESLKDGVFTSHSDVWSYGVVLWEMATLASQPY 335
A ESL+ FT+ SDVWS+GV+LWE+ T + PY
Sbjct: 204 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 237
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 171 bits (434), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 87/237 (36%), Positives = 138/237 (58%), Gaps = 13/237 (5%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLN 171
KD W + + + +++G G+FG V+ G ++ +L A+K E KA+FL
Sbjct: 106 KDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLV----AVKSCRETLPPDLKAKFLQ 161
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
EA ++K + ++V+L GV ++ P ++MEL+ GGD +LR+ E + +
Sbjct: 162 EARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRT---------EGARLRV 212
Query: 232 SRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKG 291
+LQM + A GM YL K +HRDLAARNC+V + +K+ DFGM+R+ + Y G
Sbjct: 213 KTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASG 272
Query: 292 SRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVK 348
+PV+W APE+L G ++S SDVWS+G++LWE +L + PY LSN+Q +V+
Sbjct: 273 GLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVE 329
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 171 bits (433), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 94/214 (43%), Positives = 131/214 (61%), Gaps = 19/214 (8%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
+G G FG VY G + D H CA+K N E ++FL E +MK F +V+ L
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIH-CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 188 YGVV--SEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
G+ SEG+P LV++ M GDL+N++R+ E PT+ ++ +VA GM
Sbjct: 102 LGICLRSEGSP-LVVLPYMKHGDLRNFIRN---------ETHNPTVKDLIGFGLQVAKGM 151
Query: 246 AYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY----YRKGSRGFLPVRWM 301
+LA KKFVHRDLAARNCM+ + TVKV DFG+ RD+Y+ E+ + G++ LPV+WM
Sbjct: 152 KFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAK--LPVKWM 209
Query: 302 APESLKDGVFTSHSDVWSYGVVLWEMATLASQPY 335
A ESL+ FT+ SDVWS+GV+LWE+ T + PY
Sbjct: 210 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 243
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 171 bits (433), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 94/214 (43%), Positives = 131/214 (61%), Gaps = 19/214 (8%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
+G G FG VY G + D H CA+K N E ++FL E +MK F +V+ L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIH-CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 188 YGVV--SEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
G+ SEG+P LV++ M GDL+N++R+ E PT+ ++ +VA GM
Sbjct: 95 LGICLRSEGSP-LVVLPYMKHGDLRNFIRN---------ETHNPTVKDLIGFGLQVAKGM 144
Query: 246 AYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY----YRKGSRGFLPVRWM 301
+LA KKFVHRDLAARNCM+ + TVKV DFG+ RD+Y+ E+ + G++ LPV+WM
Sbjct: 145 KFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAK--LPVKWM 202
Query: 302 APESLKDGVFTSHSDVWSYGVVLWEMATLASQPY 335
A ESL+ FT+ SDVWS+GV+LWE+ T + PY
Sbjct: 203 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 236
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 171 bits (433), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 94/214 (43%), Positives = 131/214 (61%), Gaps = 19/214 (8%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
+G G FG VY G + D H CA+K N E ++FL E +MK F +V+ L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIH-CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 188 YGVV--SEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
G+ SEG+P LV++ M GDL+N++R+ E PT+ ++ +VA GM
Sbjct: 98 LGICLRSEGSP-LVVLPYMKHGDLRNFIRN---------ETHNPTVKDLIGFGLQVAKGM 147
Query: 246 AYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY----YRKGSRGFLPVRWM 301
+LA KKFVHRDLAARNCM+ + TVKV DFG+ RD+Y+ E+ + G++ LPV+WM
Sbjct: 148 KFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAK--LPVKWM 205
Query: 302 APESLKDGVFTSHSDVWSYGVVLWEMATLASQPY 335
A ESL+ FT+ SDVWS+GV+LWE+ T + PY
Sbjct: 206 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 239
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 171 bits (432), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 94/214 (43%), Positives = 131/214 (61%), Gaps = 19/214 (8%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
+G G FG VY G + D H CA+K N E ++FL E +MK F +V+ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIH-CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 188 YGVV--SEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
G+ SEG+P LV++ M GDL+N++R+ E PT+ ++ +VA GM
Sbjct: 97 LGICLRSEGSP-LVVLPYMKHGDLRNFIRN---------ETHNPTVKDLIGFGLQVAKGM 146
Query: 246 AYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY----YRKGSRGFLPVRWM 301
+LA KKFVHRDLAARNCM+ + TVKV DFG+ RD+Y+ E+ + G++ LPV+WM
Sbjct: 147 KFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAK--LPVKWM 204
Query: 302 APESLKDGVFTSHSDVWSYGVVLWEMATLASQPY 335
A ESL+ FT+ SDVWS+GV+LWE+ T + PY
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 238
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 171 bits (432), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 94/214 (43%), Positives = 131/214 (61%), Gaps = 19/214 (8%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
+G G FG VY G + D H CA+K N E ++FL E +MK F +V+ L
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIH-CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 188 YGVV--SEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
G+ SEG+P LV++ M GDL+N++R+ E PT+ ++ +VA GM
Sbjct: 156 LGICLRSEGSP-LVVLPYMKHGDLRNFIRN---------ETHNPTVKDLIGFGLQVAKGM 205
Query: 246 AYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY----YRKGSRGFLPVRWM 301
+LA KKFVHRDLAARNCM+ + TVKV DFG+ RD+Y+ E+ + G++ LPV+WM
Sbjct: 206 KFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAK--LPVKWM 263
Query: 302 APESLKDGVFTSHSDVWSYGVVLWEMATLASQPY 335
A ESL+ FT+ SDVWS+GV+LWE+ T + PY
Sbjct: 264 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 297
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 171 bits (432), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 94/214 (43%), Positives = 131/214 (61%), Gaps = 19/214 (8%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
+G G FG VY G + D H CA+K N E ++FL E +MK F +V+ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIH-CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 188 YGVV--SEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
G+ SEG+P LV++ M GDL+N++R+ E PT+ ++ +VA GM
Sbjct: 97 LGICLRSEGSP-LVVLPYMKHGDLRNFIRN---------ETHNPTVKDLIGFGLQVAKGM 146
Query: 246 AYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY----YRKGSRGFLPVRWM 301
+LA KKFVHRDLAARNCM+ + TVKV DFG+ RD+Y+ E+ + G++ LPV+WM
Sbjct: 147 KFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAK--LPVKWM 204
Query: 302 APESLKDGVFTSHSDVWSYGVVLWEMATLASQPY 335
A ESL+ FT+ SDVWS+GV+LWE+ T + PY
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 238
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 171 bits (432), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 102/269 (37%), Positives = 144/269 (53%), Gaps = 22/269 (8%)
Query: 102 MGGDDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVA---- 157
+G D+ K + + + T+ LG G FG V +K E +KVA
Sbjct: 5 LGISDELKEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQ-----EDGSFVKVAVKML 59
Query: 158 -NENASEREKAEFLNEASVMKAFDTHHVVKLYGVVSEGNPT------LVIMELMGGGDLK 210
+ + + EFL EA+ MK FD HV KL GV +VI+ M GDL
Sbjct: 60 KADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLH 119
Query: 211 NYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLT 270
+L + R E TL R + ++A GM YL+ + F+HRDLAARNCM+A+D+T
Sbjct: 120 AFLLASRI-GENPFNLPLQTLVRFM---VDIACGMEYLSSRNFIHRDLAARNCMLAEDMT 175
Query: 271 VKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATL 330
V V DFG++R IY +YYR+G LPV+W+A ESL D ++T HSDVW++GV +WE+ T
Sbjct: 176 VCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTR 235
Query: 331 ASQPYQGLSNEQVLNWVKGKSSNEYKVNP 359
PY G+ N ++ N++ G N K P
Sbjct: 236 GQTPYAGIENAEIYNYLIG--GNRLKQPP 262
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/252 (36%), Positives = 149/252 (59%), Gaps = 18/252 (7%)
Query: 115 WEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPC---AIKVANENASEREKAEFLN 171
+E+ R ++ + +G G FG V++G+ E+P AIK S+ + +FL
Sbjct: 5 YEIQRERIELGRCIGEGQFGDVHQGIYMS----PENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
EA M+ FD H+VKL GV++E NP +IMEL G+L+++L+ V + L
Sbjct: 61 EALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQ---------VRKYSLDL 110
Query: 232 SRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKG 291
+ ++ A +++ +AYL K+FVHRD+AARN +V+ + VK+GDFG++R + ++ YY K
Sbjct: 111 ASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY-KA 169
Query: 292 SRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKS 351
S+G LP++WMAPES+ FTS SDVW +GV +WE+ +P+QG+ N V+ ++
Sbjct: 170 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE 229
Query: 352 SNEYKVNPPISL 363
N P +L
Sbjct: 230 RLPMPPNCPPTL 241
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/252 (36%), Positives = 149/252 (59%), Gaps = 18/252 (7%)
Query: 115 WEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPC---AIKVANENASEREKAEFLN 171
+E+ R ++ + +G G FG V++G+ E+P AIK S+ + +FL
Sbjct: 5 YEIQRERIELGRCIGEGQFGDVHQGIYMS----PENPALAVAIKTCKNCTSDSVREKFLQ 60
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
EA M+ FD H+VKL GV++E NP +IMEL G+L+++L+ V + L
Sbjct: 61 EALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQ---------VRKYSLDL 110
Query: 232 SRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKG 291
+ ++ A +++ +AYL K+FVHRD+AARN +V+ + VK+GDFG++R + ++ YY K
Sbjct: 111 ASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY-KA 169
Query: 292 SRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKS 351
S+G LP++WMAPES+ FTS SDVW +GV +WE+ +P+QG+ N V+ ++
Sbjct: 170 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE 229
Query: 352 SNEYKVNPPISL 363
N P +L
Sbjct: 230 RLPMPPNCPPTL 241
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/252 (36%), Positives = 149/252 (59%), Gaps = 18/252 (7%)
Query: 115 WEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPC---AIKVANENASEREKAEFLN 171
+E+ R ++ + +G G FG V++G+ E+P AIK S+ + +FL
Sbjct: 33 YEIQRERIELGRCIGEGQFGDVHQGIYMS----PENPALAVAIKTCKNCTSDSVREKFLQ 88
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
EA M+ FD H+VKL GV++E NP +IMEL G+L+++L+ V + L
Sbjct: 89 EALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQ---------VRKYSLDL 138
Query: 232 SRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKG 291
+ ++ A +++ +AYL K+FVHRD+AARN +V+ + VK+GDFG++R + ++ YY K
Sbjct: 139 ASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY-KA 197
Query: 292 SRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKS 351
S+G LP++WMAPES+ FTS SDVW +GV +WE+ +P+QG+ N V+ ++
Sbjct: 198 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE 257
Query: 352 SNEYKVNPPISL 363
N P +L
Sbjct: 258 RLPMPPNCPPTL 269
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/252 (36%), Positives = 149/252 (59%), Gaps = 18/252 (7%)
Query: 115 WEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPC---AIKVANENASEREKAEFLN 171
+E+ R ++ + +G G FG V++G+ E+P AIK S+ + +FL
Sbjct: 2 YEIQRERIELGRCIGEGQFGDVHQGIYMS----PENPALAVAIKTCKNCTSDSVREKFLQ 57
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
EA M+ FD H+VKL GV++E NP +IMEL G+L+++L+ V + L
Sbjct: 58 EALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQ---------VRKYSLDL 107
Query: 232 SRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKG 291
+ ++ A +++ +AYL K+FVHRD+AARN +V+ + VK+GDFG++R + ++ YY K
Sbjct: 108 ASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY-KA 166
Query: 292 SRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKS 351
S+G LP++WMAPES+ FTS SDVW +GV +WE+ +P+QG+ N V+ ++
Sbjct: 167 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE 226
Query: 352 SNEYKVNPPISL 363
N P +L
Sbjct: 227 RLPMPPNCPPTL 238
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/252 (36%), Positives = 149/252 (59%), Gaps = 18/252 (7%)
Query: 115 WEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPC---AIKVANENASEREKAEFLN 171
+E+ R ++ + +G G FG V++G+ E+P AIK S+ + +FL
Sbjct: 10 YEIQRERIELGRCIGEGQFGDVHQGIYMS----PENPALAVAIKTCKNCTSDSVREKFLQ 65
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
EA M+ FD H+VKL GV++E NP +IMEL G+L+++L+ V + L
Sbjct: 66 EALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQ---------VRKYSLDL 115
Query: 232 SRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKG 291
+ ++ A +++ +AYL K+FVHRD+AARN +V+ + VK+GDFG++R + ++ YY K
Sbjct: 116 ASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY-KA 174
Query: 292 SRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKS 351
S+G LP++WMAPES+ FTS SDVW +GV +WE+ +P+QG+ N V+ ++
Sbjct: 175 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE 234
Query: 352 SNEYKVNPPISL 363
N P +L
Sbjct: 235 RLPMPPNCPPTL 246
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/252 (36%), Positives = 149/252 (59%), Gaps = 18/252 (7%)
Query: 115 WEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPC---AIKVANENASEREKAEFLN 171
+E+ R ++ + +G G FG V++G+ E+P AIK S+ + +FL
Sbjct: 7 YEIQRERIELGRCIGEGQFGDVHQGIYMS----PENPALAVAIKTCKNCTSDSVREKFLQ 62
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
EA M+ FD H+VKL GV++E NP +IMEL G+L+++L+ V + L
Sbjct: 63 EALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQ---------VRKYSLDL 112
Query: 232 SRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKG 291
+ ++ A +++ +AYL K+FVHRD+AARN +V+ + VK+GDFG++R + ++ YY K
Sbjct: 113 ASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY-KA 171
Query: 292 SRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKS 351
S+G LP++WMAPES+ FTS SDVW +GV +WE+ +P+QG+ N V+ ++
Sbjct: 172 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE 231
Query: 352 SNEYKVNPPISL 363
N P +L
Sbjct: 232 RLPMPPNCPPTL 243
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 93/252 (36%), Positives = 149/252 (59%), Gaps = 18/252 (7%)
Query: 115 WEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPC---AIKVANENASEREKAEFLN 171
+E+ R ++ + +G G FG V++G+ E+P AIK S+ + +FL
Sbjct: 8 YEIQRERIELGRCIGEGQFGDVHQGIYMS----PENPALAVAIKTCKNCTSDSVREKFLQ 63
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
EA M+ FD H+VKL GV++E NP +IMEL G+L+++L+ V + L
Sbjct: 64 EALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQ---------VRKYSLDL 113
Query: 232 SRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKG 291
+ ++ A +++ +AYL K+FVHRD+AARN +V+ + VK+GDFG++R + ++ YY K
Sbjct: 114 ASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY-KA 172
Query: 292 SRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKS 351
S+G LP++WMAPES+ FTS SDVW +GV +WE+ +P+QG+ N V+ ++
Sbjct: 173 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE 232
Query: 352 SNEYKVNPPISL 363
N P +L
Sbjct: 233 RLPMPPNCPPTL 244
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 93/259 (35%), Positives = 152/259 (58%), Gaps = 12/259 (4%)
Query: 101 LMGGDDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYR----GLIKDFRSLAEHPCAIKV 156
+ G + +L + WE+ R ++ + LG G+FG V GL KD + A+K+
Sbjct: 9 MAGVSEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTK-VAVKM 67
Query: 157 ANENASEREKAEFLNEASVMKAFDTH-HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRS 215
+A+E++ ++ ++E +MK H +++ L G ++ P VI+E G+L+ YL++
Sbjct: 68 LKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQA 127
Query: 216 CRP---DAETDVERSPP---TLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDL 269
RP + + +P + ++ A +VA GM YLA KK +HRDLAARN +V +D
Sbjct: 128 RRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN 187
Query: 270 TVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
+K+ DFG+ RDI+ + +K + G LPV+WMAPE+L D ++T SDVWS+GV+LWE+ T
Sbjct: 188 VMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
Query: 330 LASQPYQGLSNEQVLNWVK 348
L PY G+ E++ +K
Sbjct: 248 LGGSPYPGVPVEELFKLLK 266
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 169 bits (428), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/265 (36%), Positives = 154/265 (58%), Gaps = 21/265 (7%)
Query: 105 DDDKLYKKDS---WEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPC---AIKVAN 158
D++ Y S +E+ R ++ + +G G FG V++G+ E+P AIK
Sbjct: 372 DEEDTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMS----PENPAMAVAIKTCK 427
Query: 159 ENASEREKAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRP 218
S+ + +FL EA M+ FD H+VKL GV++E NP +IMEL G+L+++L+
Sbjct: 428 NCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQ---- 482
Query: 219 DAETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGM 278
V + L+ ++ A +++ +AYL K+FVHRD+AARN +V+ + VK+GDFG+
Sbjct: 483 -----VRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGL 537
Query: 279 TRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGL 338
+R + ++ YY K S+G LP++WMAPES+ FTS SDVW +GV +WE+ +P+QG+
Sbjct: 538 SRYMEDSTYY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 596
Query: 339 SNEQVLNWVKGKSSNEYKVNPPISL 363
N V+ ++ N P +L
Sbjct: 597 KNNDVIGRIENGERLPMPPNCPPTL 621
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 133/231 (57%), Gaps = 15/231 (6%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNE 172
D WE+ R+ +T+ +LG G +G VY G+ K + SL A+K E+ E E EFL E
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKY-SLT---VAVKTLKEDTMEVE--EFLKE 59
Query: 173 ASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLS 232
A+VMK ++V+L GV + P +I+E M G+L +YLR C R +
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECN--------RQEVSAV 111
Query: 233 RILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGS 292
+L MA +++ M YL K F+HRDLAARNC+V ++ VKV DFG++R + Y
Sbjct: 112 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171
Query: 293 RGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
F P++W APESL F+ SDVW++GV+LWE+AT PY G+ QV
Sbjct: 172 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 221
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 132/231 (57%), Gaps = 15/231 (6%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNE 172
D WE+ R+ +T+ +LG G +G VY G+ K + SL A+K E+ E E EFL E
Sbjct: 11 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKY-SLT---VAVKTLKEDTMEVE--EFLKE 64
Query: 173 ASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLS 232
A+VMK ++V+L GV + P +I+E M G+L +YLR C R
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECN--------RQEVNAV 116
Query: 233 RILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGS 292
+L MA +++ M YL K F+HRDLAARNC+V ++ VKV DFG++R + Y
Sbjct: 117 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 176
Query: 293 RGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
F P++W APESL F+ SDVW++GV+LWE+AT PY G+ QV
Sbjct: 177 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 226
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 133/231 (57%), Gaps = 15/231 (6%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNE 172
D WE+ R+ +T+ +LG G +G VY G+ K + SL A+K E+ E E EFL E
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKY-SLT---VAVKTLKEDTMEVE--EFLKE 59
Query: 173 ASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLS 232
A+VMK ++V+L GV + P +I+E M G+L +YLR C R +
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECN--------RQEVSAV 111
Query: 233 RILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGS 292
+L MA +++ M YL K F+HRDLAARNC+V ++ VKV DFG++R + Y
Sbjct: 112 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171
Query: 293 RGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
F P++W APESL F+ SDVW++GV+LWE+AT PY G+ QV
Sbjct: 172 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 221
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 168 bits (426), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 99/260 (38%), Positives = 144/260 (55%), Gaps = 16/260 (6%)
Query: 102 MGGDDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENA 161
+G ++ D WE+ R+ +T+ +LG G +G VY G+ K + SL A+K E+
Sbjct: 14 LGTENLYFQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKY-SLT---VAVKTLKEDT 69
Query: 162 SEREKAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAE 221
E E EFL EA+VMK ++V+L GV + P ++ E M G+L +YLR C
Sbjct: 70 MEVE--EFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECN---- 123
Query: 222 TDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRD 281
R T +L MA +++ M YL K F+HRDLAARNC+V ++ VKV DFG++R
Sbjct: 124 ----REEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRL 179
Query: 282 IYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNE 341
+ Y F P++W APESL F+ SDVW++GV+LWE+AT PY G+
Sbjct: 180 MTGDTYTAHAGAKF-PIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 238
Query: 342 QVLNWV-KGKSSNEYKVNPP 360
QV + + KG + + PP
Sbjct: 239 QVYDLLEKGYRMEQPEGCPP 258
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 168 bits (426), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 93/252 (36%), Positives = 148/252 (58%), Gaps = 18/252 (7%)
Query: 115 WEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPC---AIKVANENASEREKAEFLN 171
+E+ R ++ + +G G FG V++G+ E+P AIK S+ + +FL
Sbjct: 5 YEIQRERIELGRCIGEGQFGDVHQGIYMS----PENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
EA M+ FD H+VKL GV++E NP +IMEL G+L+++L+ V + L
Sbjct: 61 EALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQ---------VRKFSLDL 110
Query: 232 SRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKG 291
+ ++ A +++ +AYL K+FVHRD+AARN +V+ VK+GDFG++R + ++ YY K
Sbjct: 111 ASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYY-KA 169
Query: 292 SRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKS 351
S+G LP++WMAPES+ FTS SDVW +GV +WE+ +P+QG+ N V+ ++
Sbjct: 170 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE 229
Query: 352 SNEYKVNPPISL 363
N P +L
Sbjct: 230 RLPMPPNCPPTL 241
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 168 bits (426), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 86/237 (36%), Positives = 137/237 (57%), Gaps = 13/237 (5%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLN 171
KD W + + + +++G G+FG V+ G ++ +L A+K E KA+FL
Sbjct: 106 KDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLV----AVKSCRETLPPDLKAKFLQ 161
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
EA ++K + ++V+L GV ++ P ++MEL+ GGD +LR+ E + +
Sbjct: 162 EARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRT---------EGARLRV 212
Query: 232 SRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKG 291
+LQM + A GM YL K +HRDLAARNC+V + +K+ DFGM+R+ + G
Sbjct: 213 KTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASG 272
Query: 292 SRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVK 348
+PV+W APE+L G ++S SDVWS+G++LWE +L + PY LSN+Q +V+
Sbjct: 273 GLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVE 329
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 168 bits (426), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 93/214 (43%), Positives = 130/214 (60%), Gaps = 19/214 (8%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
+G G FG VY G + D H CA+K N E ++FL E +MK F +V+ L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIH-CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 188 YGVV--SEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
G+ SEG+P LV++ M GDL+N++R+ E PT+ ++ +VA GM
Sbjct: 98 LGICLRSEGSP-LVVLPYMKHGDLRNFIRN---------ETHNPTVKDLIGFGLQVAKGM 147
Query: 246 AYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY----YRKGSRGFLPVRWM 301
+LA KKFVHRDLAARNCM+ + TVKV DFG+ RD+ + E+ + G++ LPV+WM
Sbjct: 148 KFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAK--LPVKWM 205
Query: 302 APESLKDGVFTSHSDVWSYGVVLWEMATLASQPY 335
A ESL+ FT+ SDVWS+GV+LWE+ T + PY
Sbjct: 206 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 239
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 168 bits (426), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 95/232 (40%), Positives = 135/232 (58%), Gaps = 17/232 (7%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNE 172
D WE+ R+ +T+ +LG G FG VY G+ K + SL A+K E+ E E EFL E
Sbjct: 4 DKWEMERTDITMKHKLGGGQFGEVYEGVWKKY-SLT---VAVKTLKEDTMEVE--EFLKE 57
Query: 173 ASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLS 232
A+VMK ++V+L GV + P +I E M G+L +YLR C R +
Sbjct: 58 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--------RQEVSAV 109
Query: 233 RILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIY-ETEYYRKG 291
+L MA +++ M YL K F+HRDLAARNC+V ++ VKV DFG++R + +T G
Sbjct: 110 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAG 169
Query: 292 SRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
++ P++W APESL F+ SDVW++GV+LWE+AT PY G+ QV
Sbjct: 170 AK--FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQV 219
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 168 bits (425), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 132/231 (57%), Gaps = 15/231 (6%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNE 172
D WE+ R+ +T+ +LG G +G VY G+ K + SL A+K E+ E E EFL E
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKY-SLT---VAVKTLKEDTMEVE--EFLKE 59
Query: 173 ASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLS 232
A+VMK ++V+L GV + P +I E M G+L +YLR C R +
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--------RQEVSAV 111
Query: 233 RILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGS 292
+L MA +++ M YL K F+HRDLAARNC+V ++ VKV DFG++R + Y
Sbjct: 112 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171
Query: 293 RGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
F P++W APESL F+ SDVW++GV+LWE+AT PY G+ QV
Sbjct: 172 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 221
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 168 bits (425), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 132/231 (57%), Gaps = 15/231 (6%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNE 172
D WE+ R+ +T+ +LG G +G VY G+ K + SL A+K E+ E E EFL E
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKY-SLT---VAVKTLKEDTMEVE--EFLKE 59
Query: 173 ASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLS 232
A+VMK ++V+L GV + P +I E M G+L +YLR C R +
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--------RQEVSAV 111
Query: 233 RILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGS 292
+L MA +++ M YL K F+HRDLAARNC+V ++ VKV DFG++R + Y
Sbjct: 112 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171
Query: 293 RGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
F P++W APESL F+ SDVW++GV+LWE+AT PY G+ QV
Sbjct: 172 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 221
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 168 bits (425), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 131/231 (56%), Gaps = 15/231 (6%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNE 172
D WE+ R+ +T+ +LG G +G VY G+ K + SL A+K E+ E E EFL E
Sbjct: 11 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKY-SLT---VAVKTLKEDTMEVE--EFLKE 64
Query: 173 ASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLS 232
A+VMK ++V+L GV + P +I E M G+L +YLR C R
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--------RQEVNAV 116
Query: 233 RILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGS 292
+L MA +++ M YL K F+HRDLAARNC+V ++ VKV DFG++R + Y
Sbjct: 117 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 176
Query: 293 RGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
F P++W APESL F+ SDVW++GV+LWE+AT PY G+ QV
Sbjct: 177 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 226
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 168 bits (425), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 131/231 (56%), Gaps = 15/231 (6%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNE 172
D WE+ R+ +T+ +LG G +G VY G+ K + SL A+K E+ E E EFL E
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKY-SLT---VAVKTLKEDTMEVE--EFLKE 59
Query: 173 ASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLS 232
A+VMK ++V+L GV + P +I E M G+L +YLR C R
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--------RQEVNAV 111
Query: 233 RILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGS 292
+L MA +++ M YL K F+HRDLAARNC+V ++ VKV DFG++R + Y
Sbjct: 112 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171
Query: 293 RGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
F P++W APESL F+ SDVW++GV+LWE+AT PY G+ QV
Sbjct: 172 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 221
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 167 bits (424), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 132/231 (57%), Gaps = 15/231 (6%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNE 172
D WE+ R+ +T+ +LG G +G VY G+ K + SL A+K E+ E E EFL E
Sbjct: 11 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKY-SLT---VAVKTLKEDTMEVE--EFLKE 64
Query: 173 ASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLS 232
A+VMK ++V+L GV + P +I E M G+L +YLR C R +
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--------RQEVSAV 116
Query: 233 RILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGS 292
+L MA +++ M YL K F+HRDLAARNC+V ++ VKV DFG++R + Y
Sbjct: 117 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 176
Query: 293 RGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
F P++W APESL F+ SDVW++GV+LWE+AT PY G+ QV
Sbjct: 177 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 226
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 167 bits (424), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 131/231 (56%), Gaps = 15/231 (6%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNE 172
D WE+ R+ +T+ +LG G +G VY G+ K + SL A+K E+ E E EFL E
Sbjct: 19 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKY-SLT---VAVKTLKEDTMEVE--EFLKE 72
Query: 173 ASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLS 232
A+VMK ++V+L GV + P +I E M G+L +YLR C R
Sbjct: 73 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--------RQEVNAV 124
Query: 233 RILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGS 292
+L MA +++ M YL K F+HRDLAARNC+V ++ VKV DFG++R + Y
Sbjct: 125 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 184
Query: 293 RGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
F P++W APESL F+ SDVW++GV+LWE+AT PY G+ QV
Sbjct: 185 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 234
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 167 bits (424), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 94/232 (40%), Positives = 136/232 (58%), Gaps = 17/232 (7%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNE 172
D WE+ R+ +T+ +LG G +G VY G+ K + SL A+K E+ E E EFL E
Sbjct: 4 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKY-SLT---VAVKTLKEDTMEVE--EFLKE 57
Query: 173 ASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLS 232
A+VMK ++V+L GV + P +I+E M G+L +YLR C R +
Sbjct: 58 AAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECN--------RQEVSAV 109
Query: 233 RILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIY-ETEYYRKG 291
+L MA +++ M YL K F+HRDLAARNC+V ++ VKV DFG++R + +T G
Sbjct: 110 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAG 169
Query: 292 SRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
++ P++W APESL F+ SDVW++GV+LWE+AT PY G+ QV
Sbjct: 170 AK--FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQV 219
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 167 bits (424), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 131/231 (56%), Gaps = 15/231 (6%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNE 172
D WE+ R+ +T+ +LG G +G VY G+ K + SL A+K E+ E E EFL E
Sbjct: 10 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKY-SLT---VAVKTLKEDTMEVE--EFLKE 63
Query: 173 ASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLS 232
A+VMK ++V+L GV + P +I E M G+L +YLR C R
Sbjct: 64 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--------RQEVNAV 115
Query: 233 RILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGS 292
+L MA +++ M YL K F+HRDLAARNC+V ++ VKV DFG++R + Y
Sbjct: 116 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 175
Query: 293 RGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
F P++W APESL F+ SDVW++GV+LWE+AT PY G+ QV
Sbjct: 176 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 225
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 167 bits (424), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 131/231 (56%), Gaps = 15/231 (6%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNE 172
D WE+ R+ +T+ +LG G +G VY G+ K + SL A+K E+ E E EFL E
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKY-SLT---VAVKTLKEDTMEVE--EFLKE 59
Query: 173 ASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLS 232
A+VMK ++V+L GV + P +I E M G+L +YLR C R
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--------RQEVNAV 111
Query: 233 RILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGS 292
+L MA +++ M YL K F+HRDLAARNC+V ++ VKV DFG++R + Y
Sbjct: 112 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171
Query: 293 RGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
F P++W APESL F+ SDVW++GV+LWE+AT PY G+ QV
Sbjct: 172 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 221
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 167 bits (424), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 131/231 (56%), Gaps = 15/231 (6%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNE 172
D WE+ R+ +T+ +LG G +G VY G+ K + SL A+K E+ E E EFL E
Sbjct: 8 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKY-SLT---VAVKTLKEDTMEVE--EFLKE 61
Query: 173 ASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLS 232
A+VMK ++V+L GV + P +I E M G+L +YLR C R
Sbjct: 62 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--------RQEVNAV 113
Query: 233 RILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGS 292
+L MA +++ M YL K F+HRDLAARNC+V ++ VKV DFG++R + Y
Sbjct: 114 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 173
Query: 293 RGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
F P++W APESL F+ SDVW++GV+LWE+AT PY G+ QV
Sbjct: 174 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 223
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 167 bits (424), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 131/231 (56%), Gaps = 15/231 (6%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNE 172
D WE+ R+ +T+ +LG G +G VY G+ K + SL A+K E+ E E EFL E
Sbjct: 11 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKY-SLT---VAVKTLKEDTMEVE--EFLKE 64
Query: 173 ASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLS 232
A+VMK ++V+L GV + P +I E M G+L +YLR C R
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--------RQEVNAV 116
Query: 233 RILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGS 292
+L MA +++ M YL K F+HRDLAARNC+V ++ VKV DFG++R + Y
Sbjct: 117 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 176
Query: 293 RGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
F P++W APESL F+ SDVW++GV+LWE+AT PY G+ QV
Sbjct: 177 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 226
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 167 bits (423), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 131/231 (56%), Gaps = 15/231 (6%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNE 172
D WE+ R+ +T+ +LG G +G VY G+ K + SL A+K E+ E E EFL E
Sbjct: 8 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKY-SLT---VAVKTLKEDTMEVE--EFLKE 61
Query: 173 ASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLS 232
A+VMK ++V+L GV + P +I E M G+L +YLR C R
Sbjct: 62 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--------RQEVNAV 113
Query: 233 RILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGS 292
+L MA +++ M YL K F+HRDLAARNC+V ++ VKV DFG++R + Y
Sbjct: 114 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 173
Query: 293 RGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
F P++W APESL F+ SDVW++GV+LWE+AT PY G+ QV
Sbjct: 174 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 223
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 167 bits (423), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 96/265 (36%), Positives = 153/265 (57%), Gaps = 21/265 (7%)
Query: 105 DDDKLYKKDS---WEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPC---AIKVAN 158
D++ Y S +E+ R ++ + +G G FG V++G+ E+P AIK
Sbjct: 372 DEEDTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMS----PENPAMAVAIKTCK 427
Query: 159 ENASEREKAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRP 218
S+ + +FL EA M+ FD H+VKL GV++E NP +IMEL G+L+++L+
Sbjct: 428 NCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQ---- 482
Query: 219 DAETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGM 278
V + L+ ++ A +++ +AYL K+FVHRD+AARN +V+ VK+GDFG+
Sbjct: 483 -----VRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGL 537
Query: 279 TRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGL 338
+R + ++ YY K S+G LP++WMAPES+ FTS SDVW +GV +WE+ +P+QG+
Sbjct: 538 SRYMEDSTYY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 596
Query: 339 SNEQVLNWVKGKSSNEYKVNPPISL 363
N V+ ++ N P +L
Sbjct: 597 KNNDVIGRIENGERLPMPPNCPPTL 621
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 167 bits (423), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 131/231 (56%), Gaps = 15/231 (6%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNE 172
D WE+ R+ +T+ +LG G +G VY G+ K + SL A+K E+ E E EFL E
Sbjct: 7 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKY-SLT---VAVKTLKEDTMEVE--EFLKE 60
Query: 173 ASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLS 232
A+VMK ++V+L GV + P +I E M G+L +YLR C R
Sbjct: 61 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--------RQEVNAV 112
Query: 233 RILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGS 292
+L MA +++ M YL K F+HRDLAARNC+V ++ VKV DFG++R + Y
Sbjct: 113 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAG 172
Query: 293 RGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
F P++W APESL F+ SDVW++GV+LWE+AT PY G+ QV
Sbjct: 173 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 222
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 167 bits (423), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 131/231 (56%), Gaps = 15/231 (6%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNE 172
D WE+ R+ +T+ +LG G +G VY G+ K + SL A+K E+ E E EFL E
Sbjct: 8 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKY-SLT---VAVKTLKEDTMEVE--EFLKE 61
Query: 173 ASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLS 232
A+VMK ++V+L GV + P +I E M G+L +YLR C R
Sbjct: 62 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--------RQEVNAV 113
Query: 233 RILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGS 292
+L MA +++ M YL K F+HRDLAARNC+V ++ VKV DFG++R + Y
Sbjct: 114 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAG 173
Query: 293 RGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
F P++W APESL F+ SDVW++GV+LWE+AT PY G+ QV
Sbjct: 174 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 223
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 167 bits (423), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 93/231 (40%), Positives = 132/231 (57%), Gaps = 15/231 (6%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNE 172
D WE+ R+ +T+ +LG G +G VY G+ K + SL A+K E+ E E EFL E
Sbjct: 4 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKY-SLT---VAVKTLKEDTMEVE--EFLKE 57
Query: 173 ASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLS 232
A+VMK ++V+L GV + P +I E M G+L +YLR C R +
Sbjct: 58 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--------RQEVSAV 109
Query: 233 RILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGS 292
+L MA +++ M YL K F+HRDLAARNC+V ++ VKV DFG++R + +
Sbjct: 110 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAG 169
Query: 293 RGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
F P++W APESL F+ SDVW++GV+LWE+AT PY G+ QV
Sbjct: 170 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQV 219
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 166 bits (421), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/232 (40%), Positives = 135/232 (58%), Gaps = 17/232 (7%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNE 172
D WE+ R+ +T+ +LG G +G VY G+ K + SL A+K E+ E E EFL E
Sbjct: 7 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKY-SLT---VAVKTLKEDTMEVE--EFLKE 60
Query: 173 ASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLS 232
A+VMK ++V+L GV + P +I+E M G+L +YLR C R
Sbjct: 61 AAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECN--------RQEVNAV 112
Query: 233 RILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIY-ETEYYRKG 291
+L MA +++ M YL K F+HRDLAARNC+V ++ VKV DFG++R + +T G
Sbjct: 113 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAG 172
Query: 292 SRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
++ P++W APESL F+ SDVW++GV+LWE+AT PY G+ QV
Sbjct: 173 AK--FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 222
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/231 (39%), Positives = 130/231 (56%), Gaps = 19/231 (8%)
Query: 114 SWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEA 173
SWE+ +T L ELG G FG+V G + ++ AIK+ E + + EF+ EA
Sbjct: 3 SWEIDPKDLTFLKELGTGQFGVVKYG-----KWRGQYDVAIKMIKEGSMSED--EFIEEA 55
Query: 174 SVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSR 233
VM +V+LYGV ++ P +I E M G L NYLR R +T +
Sbjct: 56 KVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT---------QQ 106
Query: 234 ILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSR 293
+L+M +V + M YL K+F+HRDLAARNC+V D VKV DFG++R + + EY SR
Sbjct: 107 LLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY--TSSR 164
Query: 294 GF-LPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
G PVRW PE L F+S SD+W++GV++WE+ +L PY+ +N +
Sbjct: 165 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET 215
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/232 (40%), Positives = 134/232 (57%), Gaps = 17/232 (7%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNE 172
D WE+ R+ +T+ +LG G +G VY G+ K + SL A+K E+ E E EFL E
Sbjct: 11 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKY-SLT---VAVKTLKEDTMEVE--EFLKE 64
Query: 173 ASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLS 232
A+VMK ++V+L GV + P +I E M G+L +YLR C R
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--------RQEVNAV 116
Query: 233 RILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIY-ETEYYRKG 291
+L MA +++ M YL K F+HRDLAARNC+V ++ VKV DFG++R + +T G
Sbjct: 117 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAG 176
Query: 292 SRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
++ P++W APESL F+ SDVW++GV+LWE+AT PY G+ QV
Sbjct: 177 AK--FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 226
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 166 bits (419), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/231 (40%), Positives = 132/231 (57%), Gaps = 15/231 (6%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNE 172
D WE+ R+ +T+ +LG G +G VY G+ K + SL A+K E+ E E EFL E
Sbjct: 213 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKY-SLT---VAVKTLKEDTMEVE--EFLKE 266
Query: 173 ASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLS 232
A+VMK ++V+L GV + P +I E M G+L +YLR C R +
Sbjct: 267 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--------RQEVSAV 318
Query: 233 RILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGS 292
+L MA +++ M YL K F+HR+LAARNC+V ++ VKV DFG++R + Y
Sbjct: 319 VLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 378
Query: 293 RGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
F P++W APESL F+ SDVW++GV+LWE+AT PY G+ QV
Sbjct: 379 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 428
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 89/230 (38%), Positives = 128/230 (55%), Gaps = 17/230 (7%)
Query: 114 SWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEA 173
SWE+ +T L ELG G FG+V G + ++ AIK+ E + + EF+ EA
Sbjct: 3 SWEIDPKDLTFLKELGTGQFGVVKYG-----KWRGQYDVAIKMIKEGSMSED--EFIEEA 55
Query: 174 SVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSR 233
VM +V+LYGV ++ P +I E M G L NYLR R +T +
Sbjct: 56 KVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT---------QQ 106
Query: 234 ILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSR 293
+L+M +V + M YL K+F+HRDLAARNC+V D VKV DFG++R + + EY
Sbjct: 107 LLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGS 166
Query: 294 GFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
F PVRW PE L F+S SD+W++GV++WE+ +L PY+ +N +
Sbjct: 167 KF-PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET 215
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 89/230 (38%), Positives = 128/230 (55%), Gaps = 17/230 (7%)
Query: 114 SWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEA 173
SWE+ +T L ELG G FG+V G + ++ AIK+ E + + EF+ EA
Sbjct: 2 SWEIDPKDLTFLKELGTGQFGVVKYG-----KWRGQYDVAIKMIKEGSMSED--EFIEEA 54
Query: 174 SVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSR 233
VM +V+LYGV ++ P +I E M G L NYLR R +T +
Sbjct: 55 KVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT---------QQ 105
Query: 234 ILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSR 293
+L+M +V + M YL K+F+HRDLAARNC+V D VKV DFG++R + + EY
Sbjct: 106 LLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGS 165
Query: 294 GFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
F PVRW PE L F+S SD+W++GV++WE+ +L PY+ +N +
Sbjct: 166 KF-PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET 214
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 95/260 (36%), Positives = 150/260 (57%), Gaps = 17/260 (6%)
Query: 105 DDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASER 164
D ++ ++ + E+ S V I +G G FG V G +K E AIK +E+
Sbjct: 18 DPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLK-LPGKREIFVAIKTLKSGYTEK 76
Query: 165 EKAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDV 224
++ +FL+EAS+M FD +V+ L GVV++ P ++I E M G L ++LR + D +
Sbjct: 77 QRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLR--QNDGQF-- 132
Query: 225 ERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTR---D 281
T+ +++ M +A GM YLAD +VHRDLAARN +V +L KV DFG++R D
Sbjct: 133 -----TVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLED 187
Query: 282 IYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNE 341
Y G +P+RW APE+++ FTS SDVWSYG+V+WE+ + +PY ++N+
Sbjct: 188 DTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ 247
Query: 342 QVLNWVKGKSSNEYKVNPPI 361
V+N ++ +Y++ PP+
Sbjct: 248 DVINAIE----QDYRLPPPM 263
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 89/230 (38%), Positives = 128/230 (55%), Gaps = 17/230 (7%)
Query: 114 SWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEA 173
SWE+ +T L ELG G FG+V G + ++ AIK+ E + + EF+ EA
Sbjct: 9 SWEIDPKDLTFLKELGTGQFGVVKYG-----KWRGQYDVAIKMIKEGSMSED--EFIEEA 61
Query: 174 SVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSR 233
VM +V+LYGV ++ P +I E M G L NYLR R +T +
Sbjct: 62 KVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT---------QQ 112
Query: 234 ILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSR 293
+L+M +V + M YL K+F+HRDLAARNC+V D VKV DFG++R + + EY
Sbjct: 113 LLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGS 172
Query: 294 GFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
F PVRW PE L F+S SD+W++GV++WE+ +L PY+ +N +
Sbjct: 173 KF-PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET 221
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 165 bits (417), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 89/230 (38%), Positives = 128/230 (55%), Gaps = 17/230 (7%)
Query: 114 SWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEA 173
SWE+ +T L ELG G FG+V G + ++ AIK+ E + + EF+ EA
Sbjct: 18 SWEIDPKDLTFLKELGTGQFGVVKYGKWR-----GQYDVAIKMIKEGSMSED--EFIEEA 70
Query: 174 SVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSR 233
VM +V+LYGV ++ P +I E M G L NYLR R +T +
Sbjct: 71 KVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT---------QQ 121
Query: 234 ILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSR 293
+L+M +V + M YL K+F+HRDLAARNC+V D VKV DFG++R + + EY
Sbjct: 122 LLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGS 181
Query: 294 GFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
F PVRW PE L F+S SD+W++GV++WE+ +L PY+ +N +
Sbjct: 182 KF-PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET 230
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 165 bits (417), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 93/231 (40%), Positives = 131/231 (56%), Gaps = 15/231 (6%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNE 172
D WE+ R+ +T+ +LG G +G VY G+ K + SL A+K E+ E E EFL E
Sbjct: 210 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKY-SLT---VAVKTLKEDTMEVE--EFLKE 263
Query: 173 ASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLS 232
A+VMK ++V+L GV + P +I E M G+L +YLR C R
Sbjct: 264 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--------RQEVNAV 315
Query: 233 RILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGS 292
+L MA +++ M YL K F+HR+LAARNC+V ++ VKV DFG++R + Y
Sbjct: 316 VLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 375
Query: 293 RGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
F P++W APESL F+ SDVW++GV+LWE+AT PY G+ QV
Sbjct: 376 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 425
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 165 bits (417), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 93/231 (40%), Positives = 131/231 (56%), Gaps = 15/231 (6%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNE 172
D WE+ R+ +T+ +LG G +G VY G+ K + SL A+K E+ E E EFL E
Sbjct: 252 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKY-SLT---VAVKTLKEDTMEVE--EFLKE 305
Query: 173 ASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLS 232
A+VMK ++V+L GV + P +I E M G+L +YLR C R
Sbjct: 306 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--------RQEVNAV 357
Query: 233 RILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGS 292
+L MA +++ M YL K F+HR+LAARNC+V ++ VKV DFG++R + Y
Sbjct: 358 VLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 417
Query: 293 RGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
F P++W APESL F+ SDVW++GV+LWE+AT PY G+ QV
Sbjct: 418 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 467
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 165 bits (417), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 94/249 (37%), Positives = 146/249 (58%), Gaps = 19/249 (7%)
Query: 116 EVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASV 175
E+ + ++I +G G FG V G +K S E AIK +E+++ +FL EAS+
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLK-LPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 176 MKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRIL 235
M FD ++++L GVV++ P +++ E M G L ++LR + DA+ T+ +++
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR--KHDAQF-------TVIQLV 150
Query: 236 QMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTR---DIYETEYYRKGS 292
M +A GM YL+D FVHRDLAARN ++ +L KV DFG++R D E Y +G
Sbjct: 151 GMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG- 209
Query: 293 RGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSS 352
G +P+RW +PE++ FTS SDVWSYG+VLWE+ + +PY +SN+ V+ V
Sbjct: 210 -GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV----D 264
Query: 353 NEYKVNPPI 361
Y++ PP+
Sbjct: 265 EGYRLPPPM 273
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 164 bits (416), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 92/248 (37%), Positives = 142/248 (57%), Gaps = 17/248 (6%)
Query: 116 EVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASV 175
E+ S V I + +G G FG V RG +K E AIK +ER++ EFL+EAS+
Sbjct: 10 EIDVSYVKIEEVIGAGEFGEVCRGRLKA-PGKKESCVAIKTLKGGYTERQRREFLSEASI 68
Query: 176 MKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRIL 235
M F+ ++++L GVV+ P +++ E M G L ++LR + T+ +++
Sbjct: 69 MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLR---------LNDGQFTVIQLV 119
Query: 236 QMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETE---YYRKGS 292
M +A GM YLA+ +VHRDLAARN +V +L KV DFG++R + E Y
Sbjct: 120 GMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSL 179
Query: 293 RGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSS 352
G +P+RW APE++ FTS SD WSYG+V+WE+ + +PY +SN+ V+N ++
Sbjct: 180 GGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIE---- 235
Query: 353 NEYKVNPP 360
+Y++ PP
Sbjct: 236 QDYRLPPP 243
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 164 bits (416), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 92/252 (36%), Positives = 146/252 (57%), Gaps = 18/252 (7%)
Query: 115 WEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPC---AIKVANENASEREKAEFLN 171
+E+ R ++ + +G G FG V++G+ E+P AIK S+ + +FL
Sbjct: 5 YEIQRERIELGRCIGEGQFGDVHQGIYMS----PENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
EA M+ FD H+VKL GV++E NP +IMEL G+L+++L+ V + L
Sbjct: 61 EALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQ---------VRKFSLDL 110
Query: 232 SRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKG 291
+ ++ A +++ +AYL K+FVHRD+AARN +V+ + VK+GDFG++R + E K
Sbjct: 111 ASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTXXKA 169
Query: 292 SRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKS 351
S+G LP++WMAPES+ FTS SDVW +GV +WE+ +P+QG+ N V+ ++
Sbjct: 170 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE 229
Query: 352 SNEYKVNPPISL 363
N P +L
Sbjct: 230 RLPMPPNCPPTL 241
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 164 bits (414), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 93/249 (37%), Positives = 146/249 (58%), Gaps = 19/249 (7%)
Query: 116 EVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASV 175
E+ + ++I +G G FG V G +K S E AIK +E+++ +FL EAS+
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLK-LPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 70
Query: 176 MKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRIL 235
M FD ++++L GVV++ P +++ E M G L ++LR + DA+ T+ +++
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR--KHDAQF-------TVIQLV 121
Query: 236 QMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTR---DIYETEYYRKGS 292
M +A GM YL+D +VHRDLAARN ++ +L KV DFG++R D E Y +G
Sbjct: 122 GMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG- 180
Query: 293 RGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSS 352
G +P+RW +PE++ FTS SDVWSYG+VLWE+ + +PY +SN+ V+ V
Sbjct: 181 -GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV----D 235
Query: 353 NEYKVNPPI 361
Y++ PP+
Sbjct: 236 EGYRLPPPM 244
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/249 (37%), Positives = 146/249 (58%), Gaps = 19/249 (7%)
Query: 116 EVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASV 175
E+ + ++I +G G FG V G +K S E AIK +E+++ +FL EAS+
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLK-LPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 70
Query: 176 MKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRIL 235
M FD ++++L GVV++ P +++ E M G L ++LR + DA+ T+ +++
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR--KHDAQF-------TVIQLV 121
Query: 236 QMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTR---DIYETEYYRKGS 292
M +A GM YL+D +VHRDLAARN ++ +L KV DFG++R D E Y +G
Sbjct: 122 GMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG- 180
Query: 293 RGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSS 352
G +P+RW +PE++ FTS SDVWSYG+VLWE+ + +PY +SN+ V+ V
Sbjct: 181 -GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV----D 235
Query: 353 NEYKVNPPI 361
Y++ PP+
Sbjct: 236 EGYRLPPPM 244
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/249 (37%), Positives = 146/249 (58%), Gaps = 19/249 (7%)
Query: 116 EVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASV 175
E+ + ++I +G G FG V G +K S E AIK +E+++ +FL EAS+
Sbjct: 29 ELDATNISIDKVVGAGEFGEVCSGRLK-LPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 87
Query: 176 MKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRIL 235
M FD ++++L GVV++ P +++ E M G L ++LR + DA+ T+ +++
Sbjct: 88 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR--KHDAQF-------TVIQLV 138
Query: 236 QMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTR---DIYETEYYRKGS 292
M +A GM YL+D +VHRDLAARN ++ +L KV DFG++R D E Y +G
Sbjct: 139 GMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG- 197
Query: 293 RGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSS 352
G +P+RW +PE++ FTS SDVWSYG+VLWE+ + +PY +SN+ V+ V
Sbjct: 198 -GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV----D 252
Query: 353 NEYKVNPPI 361
Y++ PP+
Sbjct: 253 EGYRLPPPM 261
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/261 (36%), Positives = 150/261 (57%), Gaps = 21/261 (8%)
Query: 105 DDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASER 164
D ++ ++ + E+ S V I + +G G FG V RG +K E AIK +ER
Sbjct: 1 DPNEAVREFAKEIDVSYVKIEEVIGAGEFGEVCRGRLKA-PGKKESCVAIKTLKGGYTER 59
Query: 165 EKAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDV 224
++ EFL+EAS+M F+ ++++L GVV+ P +++ E M G L ++LR +
Sbjct: 60 QRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLR---------L 110
Query: 225 ERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYE 284
T+ +++ M +A GM YLA+ +VHRDLAARN +V +L KV DFG++R + E
Sbjct: 111 NDGQFTVIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEE 170
Query: 285 -----TEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLS 339
TE G G +P+RW APE++ FTS SD WSYG+V+WE+ + +PY +S
Sbjct: 171 NSSDPTETSSLG--GKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMS 228
Query: 340 NEQVLNWVKGKSSNEYKVNPP 360
N+ V+N ++ +Y++ PP
Sbjct: 229 NQDVINAIE----QDYRLPPP 245
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/249 (37%), Positives = 146/249 (58%), Gaps = 19/249 (7%)
Query: 116 EVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASV 175
E+ + ++I +G G FG V G +K S E AIK +E+++ +FL EAS+
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLK-LPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 176 MKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRIL 235
M FD ++++L GVV++ P +++ E M G L ++LR + DA+ T+ +++
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR--KHDAQF-------TVIQLV 150
Query: 236 QMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTR---DIYETEYYRKGS 292
M +A GM YL+D +VHRDLAARN ++ +L KV DFG++R D E Y +G
Sbjct: 151 GMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG- 209
Query: 293 RGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSS 352
G +P+RW +PE++ FTS SDVWSYG+VLWE+ + +PY +SN+ V+ V
Sbjct: 210 -GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV----D 264
Query: 353 NEYKVNPPI 361
Y++ PP+
Sbjct: 265 EGYRLPPPM 273
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/251 (39%), Positives = 136/251 (54%), Gaps = 11/251 (4%)
Query: 105 DDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYR----GLIKDFRSLAEHPCAIKVANEN 160
D +L + WE R+ + LG G+FG V GL K+ L A+K+
Sbjct: 23 DPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLK---VAVKMLKST 79
Query: 161 ASEREKAEFLNEASVMKAFDTH-HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPD 219
A EK ++E +M H ++V L G + G P LVI E GDL N+LR + +
Sbjct: 80 AHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRR-KAE 138
Query: 220 AETDVERSPP-TLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGM 278
A+ D E P L +L +++VA GMA+LA K +HRD+AARN ++ + K+GDFG+
Sbjct: 139 ADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGL 198
Query: 279 TRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQG- 337
RDI Y LPV+WMAPES+ D V+T SDVWSYG++LWE+ +L PY G
Sbjct: 199 ARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGI 258
Query: 338 LSNEQVLNWVK 348
L N + VK
Sbjct: 259 LVNSKFYKLVK 269
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/249 (37%), Positives = 146/249 (58%), Gaps = 19/249 (7%)
Query: 116 EVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASV 175
E+ + ++I +G G FG V G +K S E AIK +E+++ +FL EAS+
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLK-LPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 176 MKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRIL 235
M FD ++++L GVV++ P +++ E M G L ++LR + DA+ T+ +++
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR--KHDAQF-------TVIQLV 150
Query: 236 QMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTR---DIYETEYYRKGS 292
M +A GM YL+D +VHRDLAARN ++ +L KV DFG++R D E Y +G
Sbjct: 151 GMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG- 209
Query: 293 RGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSS 352
G +P+RW +PE++ FTS SDVWSYG+VLWE+ + +PY +SN+ V+ V
Sbjct: 210 -GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV----D 264
Query: 353 NEYKVNPPI 361
Y++ PP+
Sbjct: 265 EGYRLPPPM 273
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/249 (37%), Positives = 146/249 (58%), Gaps = 19/249 (7%)
Query: 116 EVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASV 175
E+ + ++I +G G FG V G +K S E AIK +E+++ +FL EAS+
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLK-LPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 176 MKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRIL 235
M FD ++++L GVV++ P +++ E M G L ++LR + DA+ T+ +++
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR--KHDAQF-------TVIQLV 150
Query: 236 QMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTR---DIYETEYYRKGS 292
M +A GM YL+D +VHRDLAARN ++ +L KV DFG++R D E Y +G
Sbjct: 151 GMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG- 209
Query: 293 RGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSS 352
G +P+RW +PE++ FTS SDVWSYG+VLWE+ + +PY +SN+ V+ V
Sbjct: 210 -GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV----D 264
Query: 353 NEYKVNPPI 361
Y++ PP+
Sbjct: 265 EGYRLPPPM 273
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/249 (37%), Positives = 146/249 (58%), Gaps = 19/249 (7%)
Query: 116 EVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASV 175
E+ + ++I +G G FG V G +K S E AIK +E+++ +FL EAS+
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLK-LPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 176 MKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRIL 235
M FD ++++L GVV++ P +++ E M G L ++LR + DA+ T+ +++
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR--KHDAQF-------TVIQLV 150
Query: 236 QMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTR---DIYETEYYRKGS 292
M +A GM YL+D +VHRDLAARN ++ +L KV DFG++R D E Y +G
Sbjct: 151 GMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG- 209
Query: 293 RGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSS 352
G +P+RW +PE++ FTS SDVWSYG+VLWE+ + +PY +SN+ V+ V
Sbjct: 210 -GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV----D 264
Query: 353 NEYKVNPPI 361
Y++ PP+
Sbjct: 265 EGYRLPPPM 273
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/249 (37%), Positives = 146/249 (58%), Gaps = 19/249 (7%)
Query: 116 EVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASV 175
E+ + ++I +G G FG V G +K S E AIK +E+++ +FL EAS+
Sbjct: 39 ELDATNISIDKVVGAGEFGEVCSGRLK-LPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 97
Query: 176 MKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRIL 235
M FD ++++L GVV++ P +++ E M G L ++LR + DA+ T+ +++
Sbjct: 98 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR--KHDAQF-------TVIQLV 148
Query: 236 QMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTR---DIYETEYYRKGS 292
M +A GM YL+D +VHRDLAARN ++ +L KV DFG++R D E Y +G
Sbjct: 149 GMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG- 207
Query: 293 RGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSS 352
G +P+RW +PE++ FTS SDVWSYG+VLWE+ + +PY +SN+ V+ V
Sbjct: 208 -GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV----D 262
Query: 353 NEYKVNPPI 361
Y++ PP+
Sbjct: 263 EGYRLPPPM 271
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/249 (37%), Positives = 146/249 (58%), Gaps = 19/249 (7%)
Query: 116 EVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASV 175
E+ + ++I +G G FG V G +K S E AIK +E+++ +FL EAS+
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLK-LPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 176 MKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRIL 235
M FD ++++L GVV++ P +++ E M G L ++LR + DA+ T+ +++
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR--KHDAQF-------TVIQLV 150
Query: 236 QMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTR---DIYETEYYRKGS 292
M +A GM YL+D +VHRDLAARN ++ +L KV DFG++R D E Y +G
Sbjct: 151 GMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG- 209
Query: 293 RGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSS 352
G +P+RW +PE++ FTS SDVWSYG+VLWE+ + +PY +SN+ V+ V
Sbjct: 210 -GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV----D 264
Query: 353 NEYKVNPPI 361
Y++ PP+
Sbjct: 265 EGYRLPPPM 273
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/249 (37%), Positives = 145/249 (58%), Gaps = 19/249 (7%)
Query: 116 EVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASV 175
E+ + ++I +G G FG V G +K S E AIK +E+++ +FL EAS+
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLK-LPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 176 MKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRIL 235
M FD ++++L GVV++ P +++ E M G L ++LR + DA+ T+ +++
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR--KHDAQF-------TVIQLV 150
Query: 236 QMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTR---DIYETEYYRKGS 292
M +A GM YL+D +VHRDLAARN ++ +L KV DFG+ R D E Y +G
Sbjct: 151 GMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRG- 209
Query: 293 RGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSS 352
G +P+RW +PE++ FTS SDVWSYG+VLWE+ + +PY +SN+ V+ V
Sbjct: 210 -GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV----D 264
Query: 353 NEYKVNPPI 361
Y++ PP+
Sbjct: 265 EGYRLPPPM 273
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/251 (37%), Positives = 144/251 (57%), Gaps = 17/251 (6%)
Query: 114 SWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEA 173
S E+ S V I +G G FG V G +K E AIK +E+++ +FL+EA
Sbjct: 1 SKEIDISCVKIEQVIGAGEFGEVCSGHLK-LPGKREIFVAIKTLKSGYTEKQRRDFLSEA 59
Query: 174 SVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSR 233
S+M FD +V+ L GVV++ P ++I E M G L ++LR + D + T+ +
Sbjct: 60 SIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLR--QNDGQF-------TVIQ 110
Query: 234 ILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTR---DIYETEYYRK 290
++ M +A GM YLAD +VHR LAARN +V +L KV DFG++R D Y
Sbjct: 111 LVGMLRGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTS 170
Query: 291 GSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGK 350
G +P+RW APE+++ FTS SDVWSYG+V+WE+ + +PY ++N+ V+N ++
Sbjct: 171 ALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIE-- 228
Query: 351 SSNEYKVNPPI 361
+Y++ PP+
Sbjct: 229 --QDYRLPPPM 237
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/251 (39%), Positives = 136/251 (54%), Gaps = 11/251 (4%)
Query: 105 DDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYR----GLIKDFRSLAEHPCAIKVANEN 160
D +L + WE R+ + LG G+FG V GL K+ L A+K+
Sbjct: 31 DPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLK---VAVKMLKST 87
Query: 161 ASEREKAEFLNEASVMKAFDTH-HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPD 219
A EK ++E +M H ++V L G + G P LVI E GDL N+LR + +
Sbjct: 88 AHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRR-KAE 146
Query: 220 AETDVERSPP-TLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGM 278
A+ D E P L +L +++VA GMA+LA K +HRD+AARN ++ + K+GDFG+
Sbjct: 147 ADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGL 206
Query: 279 TRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQG- 337
RDI Y LPV+WMAPES+ D V+T SDVWSYG++LWE+ +L PY G
Sbjct: 207 ARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGI 266
Query: 338 LSNEQVLNWVK 348
L N + VK
Sbjct: 267 LVNSKFYKLVK 277
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 93/249 (37%), Positives = 145/249 (58%), Gaps = 19/249 (7%)
Query: 116 EVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASV 175
E+ + ++I +G G FG V G +K S E AIK +E+++ +FL EAS+
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLK-LPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 176 MKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRIL 235
M FD ++++L GVV++ P +++ E M G L ++LR + DA+ T+ +++
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR--KHDAQF-------TVIQLV 150
Query: 236 QMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTR---DIYETEYYRKGS 292
M +A GM YL+D +VHRDLAARN ++ +L KV DFG+ R D E Y +G
Sbjct: 151 GMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRG- 209
Query: 293 RGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSS 352
G +P+RW +PE++ FTS SDVWSYG+VLWE+ + +PY +SN+ V+ V
Sbjct: 210 -GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV----D 264
Query: 353 NEYKVNPPI 361
Y++ PP+
Sbjct: 265 EGYRLPPPM 273
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 161 bits (408), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 88/230 (38%), Positives = 127/230 (55%), Gaps = 17/230 (7%)
Query: 114 SWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEA 173
SWE+ +T L ELG G FG+V G + ++ AIK+ E + + EF+ EA
Sbjct: 18 SWEIDPKDLTFLKELGTGQFGVVKYGKWR-----GQYDVAIKMIKEGSMSED--EFIEEA 70
Query: 174 SVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSR 233
VM +V+LYGV ++ P +I E M G L NYLR R +T +
Sbjct: 71 KVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT---------QQ 121
Query: 234 ILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSR 293
+L+M +V + M YL K+F+HRDLAARNC+V D VKV DFG++R + + E
Sbjct: 122 LLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGS 181
Query: 294 GFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
F PVRW PE L F+S SD+W++GV++WE+ +L PY+ +N +
Sbjct: 182 KF-PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET 230
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 161 bits (408), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 93/249 (37%), Positives = 145/249 (58%), Gaps = 19/249 (7%)
Query: 116 EVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASV 175
E+ + ++I +G G FG V G +K S E AIK +E+++ +FL EAS+
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLK-LPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 176 MKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRIL 235
M FD ++++L GVV++ P +++ E M G L ++LR + DA+ T+ +++
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR--KHDAQF-------TVIQLV 150
Query: 236 QMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTR---DIYETEYYRKGS 292
M +A GM YL+D VHRDLAARN ++ +L KV DFG++R D E Y +G
Sbjct: 151 GMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG- 209
Query: 293 RGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSS 352
G +P+RW +PE++ FTS SDVWSYG+VLWE+ + +PY +SN+ V+ V
Sbjct: 210 -GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV----D 264
Query: 353 NEYKVNPPI 361
Y++ PP+
Sbjct: 265 EGYRLPPPM 273
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 161 bits (408), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 97/254 (38%), Positives = 134/254 (52%), Gaps = 13/254 (5%)
Query: 105 DDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYR----GLIKDFRSLAEHPCAIKVANEN 160
D +L + WE R+ + LG G+FG V GL K+ L A+K+
Sbjct: 31 DPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLK---VAVKMLKST 87
Query: 161 ASEREKAEFLNEASVMKAFDTH-HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPD 219
A EK ++E +M H ++V L G + G P LVI E GDL N+LR
Sbjct: 88 AHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRV 147
Query: 220 AETD----VERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGD 275
ETD + S + +L +++VA GMA+LA K +HRD+AARN ++ + K+GD
Sbjct: 148 LETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGD 207
Query: 276 FGMTRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPY 335
FG+ RDI Y LPV+WMAPES+ D V+T SDVWSYG++LWE+ +L PY
Sbjct: 208 FGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 267
Query: 336 QG-LSNEQVLNWVK 348
G L N + VK
Sbjct: 268 PGILVNSKFYKLVK 281
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 160 bits (406), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 130/229 (56%), Gaps = 17/229 (7%)
Query: 116 EVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASV 175
E+ R ++T+L ELG+G FG+V G K ++ A+K+ E + + EF EA
Sbjct: 4 ELKREEITLLKELGSGQFGVVKLGKWK-----GQYDVAVKMIKEGSMSED--EFFQEAQT 56
Query: 176 MKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRIL 235
M +VK YGV S+ P ++ E + G L NYLRS E S++L
Sbjct: 57 MMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEP---------SQLL 107
Query: 236 QMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGF 295
+M +V +GMA+L +F+HRDLAARNC+V DL VKV DFGMTR + + +Y F
Sbjct: 108 EMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKF 167
Query: 296 LPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVL 344
PV+W APE ++S SDVW++G+++WE+ +L PY +N +V+
Sbjct: 168 -PVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVV 215
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 160 bits (406), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 97/254 (38%), Positives = 134/254 (52%), Gaps = 13/254 (5%)
Query: 105 DDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYR----GLIKDFRSLAEHPCAIKVANEN 160
D +L + WE R+ + LG G+FG V GL K+ L A+K+
Sbjct: 31 DPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLK---VAVKMLKST 87
Query: 161 ASEREKAEFLNEASVMKAFDTH-HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPD 219
A EK ++E +M H ++V L G + G P LVI E GDL N+LR
Sbjct: 88 AHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRV 147
Query: 220 AETD----VERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGD 275
ETD + S + +L +++VA GMA+LA K +HRD+AARN ++ + K+GD
Sbjct: 148 LETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGD 207
Query: 276 FGMTRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPY 335
FG+ RDI Y LPV+WMAPES+ D V+T SDVWSYG++LWE+ +L PY
Sbjct: 208 FGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 267
Query: 336 QG-LSNEQVLNWVK 348
G L N + VK
Sbjct: 268 PGILVNSKFYKLVK 281
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 86/222 (38%), Positives = 124/222 (55%), Gaps = 17/222 (7%)
Query: 122 VTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDT 181
+T L ELG G FG+V G + ++ AIK+ E + + EF+ EA VM
Sbjct: 6 LTFLKELGTGQFGVVKYG-----KWRGQYDVAIKMIKEGSMSED--EFIEEAKVMMNLSH 58
Query: 182 HHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEV 241
+V+LYGV ++ P +I E M G L NYLR R +T ++L+M +V
Sbjct: 59 EKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT---------QQLLEMCKDV 109
Query: 242 ADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWM 301
+ M YL K+F+HRDLAARNC+V D VKV DFG++R + + EY F PVRW
Sbjct: 110 CEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF-PVRWS 168
Query: 302 APESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
PE L F+S SD+W++GV++WE+ +L PY+ +N +
Sbjct: 169 PPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET 210
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/246 (36%), Positives = 132/246 (53%), Gaps = 13/246 (5%)
Query: 116 EVLRSKVTILDELGNGSFGLVYRG-LIKDFRSLAEHPCAIKVANENASEREKAEFLNEAS 174
E+ S V ++ELG FG VY+G L AIK + A + EF +EA
Sbjct: 22 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAM 81
Query: 175 VMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAE---TDVERS---- 227
+ +VV L GVV++ P +I GDL +L P ++ TD +R+
Sbjct: 82 LRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSA 141
Query: 228 --PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
PP + + A++A GM YL+ VH+DLA RN +V D L VK+ D G+ R++Y
Sbjct: 142 LEPPDF---VHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAA 198
Query: 286 EYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLN 345
+YY+ LP+RWMAPE++ G F+ SD+WSYGVVLWE+ + QPY G SN+ V+
Sbjct: 199 DYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVE 258
Query: 346 WVKGKS 351
++ +
Sbjct: 259 MIRNRQ 264
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 159 bits (402), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/246 (36%), Positives = 132/246 (53%), Gaps = 13/246 (5%)
Query: 116 EVLRSKVTILDELGNGSFGLVYRG-LIKDFRSLAEHPCAIKVANENASEREKAEFLNEAS 174
E+ S V ++ELG FG VY+G L AIK + A + EF +EA
Sbjct: 5 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAM 64
Query: 175 VMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAE---TDVERS---- 227
+ +VV L GVV++ P +I GDL +L P ++ TD +R+
Sbjct: 65 LRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSA 124
Query: 228 --PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
PP + + A++A GM YL+ VH+DLA RN +V D L VK+ D G+ R++Y
Sbjct: 125 LEPPDF---VHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAA 181
Query: 286 EYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLN 345
+YY+ LP+RWMAPE++ G F+ SD+WSYGVVLWE+ + QPY G SN+ V+
Sbjct: 182 DYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVE 241
Query: 346 WVKGKS 351
++ +
Sbjct: 242 MIRNRQ 247
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 88/236 (37%), Positives = 138/236 (58%), Gaps = 15/236 (6%)
Query: 116 EVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASV 175
E+ S +TI +G G FG V G +K E P AIK +E+++ +FL EAS+
Sbjct: 18 EIEASCITIERVIGAGEFGEVCSGRLK-LPGKRELPVAIKTLKVGYTEKQRRDFLGEASI 76
Query: 176 MKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRIL 235
M FD +++ L GVV++ P +++ E M G L +L+ + D + T+ +++
Sbjct: 77 MGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLK--KNDGQF-------TVIQLV 127
Query: 236 QMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTR---DIYETEYYRKGS 292
M ++ GM YL+D +VHRDLAARN ++ +L KV DFG++R D E Y +G
Sbjct: 128 GMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG- 186
Query: 293 RGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVK 348
G +P+RW APE++ FTS SDVWSYG+V+WE+ + +PY ++N+ V+ V+
Sbjct: 187 -GKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVE 241
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 158 bits (399), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 96/256 (37%), Positives = 135/256 (52%), Gaps = 15/256 (5%)
Query: 105 DDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYR----GLIKDFRSLAEHPCAIKVANEN 160
D +L + WE R+ + LG G+FG V GL K+ L A+K+
Sbjct: 31 DPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLK---VAVKMLKST 87
Query: 161 ASEREKAEFLNEASVMKAFDTH-HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRP- 218
A EK ++E +M H ++V L G + G P LVI E GDL N+LR RP
Sbjct: 88 AHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPP 147
Query: 219 --DAETDVERSPP---TLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKV 273
+ + +P + +L +++VA GMA+LA K +HRD+AARN ++ + K+
Sbjct: 148 GLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKI 207
Query: 274 GDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQ 333
GDFG+ RDI Y LPV+WMAPES+ D V+T SDVWSYG++LWE+ +L
Sbjct: 208 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN 267
Query: 334 PYQG-LSNEQVLNWVK 348
PY G L N + VK
Sbjct: 268 PYPGILVNSKFYKLVK 283
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 157 bits (397), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 92/249 (36%), Positives = 141/249 (56%), Gaps = 19/249 (7%)
Query: 116 EVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASV 175
E+ S + I +G G FG V G +K E AIK +++++ +FL+EAS+
Sbjct: 4 EIDASCIKIEKVIGVGEFGEVCSGRLK-VPGKREICVAIKTLKAGYTDKQRRDFLSEASI 62
Query: 176 MKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRIL 235
M FD +++ L GVV++ P ++I E M G L +LR + D T+ +++
Sbjct: 63 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLR--KNDGRF-------TVIQLV 113
Query: 236 QMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTR---DIYETEYYRKGS 292
M + GM YL+D +VHRDLAARN +V +L KV DFGM+R D E Y +G
Sbjct: 114 GMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRG- 172
Query: 293 RGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSS 352
G +P+RW APE++ FTS SDVWSYG+V+WE+ + +PY +SN+ V+ ++
Sbjct: 173 -GKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIE---- 227
Query: 353 NEYKVNPPI 361
Y++ PP+
Sbjct: 228 EGYRLPPPM 236
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 157 bits (397), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 92/249 (36%), Positives = 141/249 (56%), Gaps = 19/249 (7%)
Query: 116 EVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASV 175
E+ S + I +G G FG V G +K E AIK +++++ +FL+EAS+
Sbjct: 10 EIDASCIKIEKVIGVGEFGEVCSGRLK-VPGKREICVAIKTLKAGYTDKQRRDFLSEASI 68
Query: 176 MKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRIL 235
M FD +++ L GVV++ P ++I E M G L +LR + D T+ +++
Sbjct: 69 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLR--KNDGRF-------TVIQLV 119
Query: 236 QMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTR---DIYETEYYRKGS 292
M + GM YL+D +VHRDLAARN +V +L KV DFGM+R D E Y +G
Sbjct: 120 GMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRG- 178
Query: 293 RGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSS 352
G +P+RW APE++ FTS SDVWSYG+V+WE+ + +PY +SN+ V+ ++
Sbjct: 179 -GKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIE---- 233
Query: 353 NEYKVNPPI 361
Y++ PP+
Sbjct: 234 EGYRLPPPM 242
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/247 (38%), Positives = 142/247 (57%), Gaps = 15/247 (6%)
Query: 105 DDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASER 164
D ++ + + E+ S + I +G G FG V G +K + AIK +E+
Sbjct: 28 DPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLK-LPGKRDVAVAIKTLKVGYTEK 86
Query: 165 EKAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDV 224
++ +FL EAS+M FD +VV L GVV+ G P ++++E M G L +LR + D +
Sbjct: 87 QRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLR--KHDGQF-- 142
Query: 225 ERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTR---D 281
T+ +++ M +A GM YLAD +VHRDLAARN +V +L KV DFG++R D
Sbjct: 143 -----TVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIED 197
Query: 282 IYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNE 341
E Y G G +PVRW APE+++ FTS SDVWSYG+V+WE+ + +PY +SN+
Sbjct: 198 DPEAVYTTTG--GKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ 255
Query: 342 QVLNWVK 348
V+ ++
Sbjct: 256 DVIKAIE 262
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/263 (36%), Positives = 133/263 (50%), Gaps = 22/263 (8%)
Query: 105 DDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYR----GLIKDFRSLAEHPCAIKVANEN 160
D +L + WE R+ + LG G+FG V GL K+ L A+K+
Sbjct: 16 DPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLK---VAVKMLKST 72
Query: 161 ASEREKAEFLNEASVMKAFDTH-HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLR----- 214
A EK ++E +M H ++V L G + G P LVI E GDL N+LR
Sbjct: 73 AHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEA 132
Query: 215 --------SCRPDAETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVA 266
P+ + P L +L +++VA GMA+LA K +HRD+AARN ++
Sbjct: 133 MLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT 192
Query: 267 DDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWE 326
+ K+GDFG+ RDI Y LPV+WMAPES+ D V+T SDVWSYG++LWE
Sbjct: 193 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWE 252
Query: 327 MATLASQPYQG-LSNEQVLNWVK 348
+ +L PY G L N + VK
Sbjct: 253 IFSLGLNPYPGILVNSKFYKLVK 275
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 146/260 (56%), Gaps = 19/260 (7%)
Query: 105 DDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASER 164
D ++ ++ + E+ S + I +G G FG V G +K E AIK +++
Sbjct: 14 DPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLK-VPGKREICVAIKTLKAGYTDK 72
Query: 165 EKAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDV 224
++ +FL+EAS+M FD +++ L GVV++ P ++I E M G L +LR + D
Sbjct: 73 QRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLR--KNDGRF-- 128
Query: 225 ERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTR---D 281
T+ +++ M + GM YL+D VHRDLAARN +V +L KV DFGM+R D
Sbjct: 129 -----TVIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLED 183
Query: 282 IYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNE 341
E Y +G G +P+RW APE++ FTS SDVWSYG+V+WE+ + +PY +SN+
Sbjct: 184 DPEAAYTTRG--GKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ 241
Query: 342 QVLNWVKGKSSNEYKVNPPI 361
V+ ++ Y++ PP+
Sbjct: 242 DVIKAIE----EGYRLPPPM 257
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/239 (36%), Positives = 138/239 (57%), Gaps = 7/239 (2%)
Query: 110 YKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDF-RSLAEHPCAIKVANENASEREKAE 168
Y WE R ++ + LG G+FG V ++ A+K+ E A+ E
Sbjct: 17 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA 76
Query: 169 FLNEASVMKAFDTH-HVVKLYGVVSE-GNPTLVIMELMGGGDLKNYLRSCRPD--AETDV 224
++E ++ H +VV L G ++ G P +VI+E G+L YLRS R + D+
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDL 136
Query: 225 ERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIY- 283
+ TL ++ + +VA GM +LA +K +HRDLAARN ++++ VK+ DFG+ RDIY
Sbjct: 137 YKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYK 196
Query: 284 ETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQ 342
+ +Y RKG LP++WMAPE++ D V+T SDVWS+GV+LWE+ +L + PY G+ ++
Sbjct: 197 DPDYVRKGD-ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 254
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 87/215 (40%), Positives = 128/215 (59%), Gaps = 15/215 (6%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
+G G FG+VY G D ++ CAIK + ++ FL E +M+ + +V+ L
Sbjct: 29 IGKGHFGVVYHGEYID-QAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLAL 87
Query: 188 YGVV--SEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
G++ EG P V++ M GDL ++RS + + PT+ ++ +VA GM
Sbjct: 88 IGIMLPPEGLPH-VLLPYMCHGDLLQFIRSPQRN---------PTVKDLISFGLQVARGM 137
Query: 246 AYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY--RKGSRGFLPVRWMAP 303
YLA++KFVHRDLAARNCM+ + TVKV DFG+ RDI + EYY ++ LPV+W A
Sbjct: 138 EYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTAL 197
Query: 304 ESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGL 338
ESL+ FT+ SDVWS+GV+LWE+ T + PY+ +
Sbjct: 198 ESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHI 232
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 83/239 (34%), Positives = 131/239 (54%), Gaps = 18/239 (7%)
Query: 108 KLYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
K + KD+WE+ R + ++ LG G FG V+ G + +A V
Sbjct: 1 KPWDKDAWEIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVA-------VKTLKPGTMSVQ 53
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
FL EA++MK +V+LY VV+ P +I E M G L ++L+S E
Sbjct: 54 AFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSD--------EGG 105
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
L +++ +A++A+GMAY+ K ++HRDL A N +V++ L K+ DFG+ R I + EY
Sbjct: 106 KVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY 165
Query: 288 Y-RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLN 345
R+G++ P++W APE++ G FT SDVWS+G++L+E+ T PY G +N V+
Sbjct: 166 TAREGAK--FPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMT 222
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 155 bits (391), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/239 (36%), Positives = 138/239 (57%), Gaps = 7/239 (2%)
Query: 110 YKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDF-RSLAEHPCAIKVANENASEREKAE 168
Y WE R ++ + LG G+FG V ++ A+K+ E A+ E
Sbjct: 17 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA 76
Query: 169 FLNEASVMKAFDTH-HVVKLYGVVSE-GNPTLVIMELMGGGDLKNYLRSCRPD--AETDV 224
++E ++ H +VV L G ++ G P +VI+E G+L YLRS R + D+
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDL 136
Query: 225 ERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIY- 283
+ TL ++ + +VA GM +LA +K +HRDLAARN ++++ VK+ DFG+ RDIY
Sbjct: 137 YKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYK 196
Query: 284 ETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQ 342
+ +Y RKG LP++WMAPE++ D V+T SDVWS+GV+LWE+ +L + PY G+ ++
Sbjct: 197 DPDYVRKGD-ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 254
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 154 bits (390), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 138/243 (56%), Gaps = 11/243 (4%)
Query: 110 YKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAE-HPCAIKVANENASEREKAE 168
Y WE R ++ + LG G+FG V A A+K+ E A+ E
Sbjct: 19 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 78
Query: 169 FLNEASVMKAFDTH-HVVKLYGVVSE-GNPTLVIMELMGGGDLKNYLRSCR------PDA 220
++E ++ H +VV L G ++ G P +VI+E G+L YLRS R +A
Sbjct: 79 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEA 138
Query: 221 ETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTR 280
D+ + TL ++ + +VA GM +LA +K +HRDLAARN ++++ VK+ DFG+ R
Sbjct: 139 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 198
Query: 281 DIY-ETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLS 339
DIY + +Y RKG LP++WMAPE++ D V+T SDVWS+GV+LWE+ +L + PY G+
Sbjct: 199 DIYKDPDYVRKGD-ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 257
Query: 340 NEQ 342
++
Sbjct: 258 IDE 260
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 154 bits (390), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 138/243 (56%), Gaps = 11/243 (4%)
Query: 110 YKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAE-HPCAIKVANENASEREKAE 168
Y WE R ++ + LG G+FG V A A+K+ E A+ E
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 169 FLNEASVMKAFDTH-HVVKLYGVVSE-GNPTLVIMELMGGGDLKNYLRSCRPD------A 220
++E ++ H +VV L G ++ G P +VI+E G+L YLRS R + A
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 136
Query: 221 ETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTR 280
D+ + TL ++ + +VA GM +LA +K +HRDLAARN ++++ VK+ DFG+ R
Sbjct: 137 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
Query: 281 DIY-ETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLS 339
DIY + +Y RKG LP++WMAPE++ D V+T SDVWS+GV+LWE+ +L + PY G+
Sbjct: 197 DIYKDPDYVRKGD-ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 255
Query: 340 NEQ 342
++
Sbjct: 256 IDE 258
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 154 bits (390), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 138/243 (56%), Gaps = 11/243 (4%)
Query: 110 YKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAE-HPCAIKVANENASEREKAE 168
Y WE R ++ + LG G+FG V A A+K+ E A+ E
Sbjct: 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 113
Query: 169 FLNEASVMKAFDTH-HVVKLYGVVSE-GNPTLVIMELMGGGDLKNYLRSCRPD------A 220
++E ++ H +VV L G ++ G P +VI+E G+L YLRS R + A
Sbjct: 114 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 173
Query: 221 ETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTR 280
D+ + TL ++ + +VA GM +LA +K +HRDLAARN ++++ VK+ DFG+ R
Sbjct: 174 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 233
Query: 281 DIY-ETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLS 339
DIY + +Y RKG LP++WMAPE++ D V+T SDVWS+GV+LWE+ +L + PY G+
Sbjct: 234 DIYKDPDYVRKGD-ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 292
Query: 340 NEQ 342
++
Sbjct: 293 IDE 295
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 154 bits (389), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 137/243 (56%), Gaps = 11/243 (4%)
Query: 110 YKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAE-HPCAIKVANENASEREKAE 168
Y WE R ++ + LG G+FG V A A+K+ E A+ E
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 169 FLNEASVMKAFDTH-HVVKLYGVVSE-GNPTLVIMELMGGGDLKNYLRSCRPD------A 220
++E ++ H +VV L G ++ G P +VI E G+L YLRS R + A
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 221 ETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTR 280
D+ + TL ++ + +VA GM +LA +K +HRDLAARN ++++ VK+ DFG+ R
Sbjct: 128 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
Query: 281 DIY-ETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLS 339
DIY + +Y RKG LP++WMAPE++ D V+T SDVWS+GV+LWE+ +L + PY G+
Sbjct: 188 DIYKDPDYVRKGD-ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 246
Query: 340 NEQ 342
++
Sbjct: 247 IDE 249
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 154 bits (388), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 138/240 (57%), Gaps = 19/240 (7%)
Query: 107 DKLYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREK 166
K + +D WEV R + +++ LG G FG V+ G +A V +
Sbjct: 6 QKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVA-------VKSLKQGSMSP 58
Query: 167 AEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVER 226
FL EA++MK +V+LY VV++ P +I E M G L ++L++ P
Sbjct: 59 DAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT--PSG------ 109
Query: 227 SPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETE 286
T++++L MAA++A+GMA++ ++ ++HRDL A N +V+D L+ K+ DFG+ R I + E
Sbjct: 110 IKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 169
Query: 287 YY-RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLN 345
Y R+G++ P++W APE++ G FT SDVWS+G++L E+ T PY G++N +V+
Sbjct: 170 YTAREGAK--FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 227
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 154 bits (388), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 137/243 (56%), Gaps = 11/243 (4%)
Query: 110 YKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAE-HPCAIKVANENASEREKAE 168
Y WE R ++ + LG G+FG V A A+K+ E A+ E
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 169 FLNEASVMKAFDTH-HVVKLYGVVSE-GNPTLVIMELMGGGDLKNYLRSCRPD------A 220
++E ++ H +VV L G ++ G P +VI E G+L YLRS R + A
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 221 ETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTR 280
D+ + TL ++ + +VA GM +LA +K +HRDLAARN ++++ VK+ DFG+ R
Sbjct: 128 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
Query: 281 DIY-ETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLS 339
DIY + +Y RKG LP++WMAPE++ D V+T SDVWS+GV+LWE+ +L + PY G+
Sbjct: 188 DIYKDPDYVRKGD-ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 246
Query: 340 NEQ 342
++
Sbjct: 247 IDE 249
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 154 bits (388), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 138/240 (57%), Gaps = 19/240 (7%)
Query: 107 DKLYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREK 166
K + +D WEV R + +++ LG G FG V+ G +A V +
Sbjct: 5 QKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVA-------VKSLKQGSMSP 57
Query: 167 AEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVER 226
FL EA++MK +V+LY VV++ P +I E M G L ++L++ P
Sbjct: 58 DAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT--PSG------ 108
Query: 227 SPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETE 286
T++++L MAA++A+GMA++ ++ ++HRDL A N +V+D L+ K+ DFG+ R I + E
Sbjct: 109 IKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 168
Query: 287 YY-RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLN 345
Y R+G++ P++W APE++ G FT SDVWS+G++L E+ T PY G++N +V+
Sbjct: 169 YTAREGAK--FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 226
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 154 bits (388), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 84/239 (35%), Positives = 138/239 (57%), Gaps = 19/239 (7%)
Query: 108 KLYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
K + +D WEV R + +++ LG G FG V+ G +A V +
Sbjct: 1 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVA-------VKSLKQGSMSPD 53
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
FL EA++MK +V+LY VV++ P +I E M G L ++L++ P
Sbjct: 54 AFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT--PSG------I 104
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
T++++L MAA++A+GMA++ ++ ++HRDL A N +V+D L+ K+ DFG+ R I + EY
Sbjct: 105 KLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY 164
Query: 288 Y-RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLN 345
R+G++ P++W APE++ G FT SDVWS+G++L E+ T PY G++N +V+
Sbjct: 165 TAREGAK--FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 221
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 154 bits (388), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 138/240 (57%), Gaps = 19/240 (7%)
Query: 107 DKLYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREK 166
K + +D WEV R + +++ LG G FG V+ G +A V +
Sbjct: 10 QKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVA-------VKSLKQGSMSP 62
Query: 167 AEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVER 226
FL EA++MK +V+LY VV++ P +I E M G L ++L++ P
Sbjct: 63 DAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT--PSG------ 113
Query: 227 SPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETE 286
T++++L MAA++A+GMA++ ++ ++HRDL A N +V+D L+ K+ DFG+ R I + E
Sbjct: 114 IKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 173
Query: 287 YY-RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLN 345
Y R+G++ P++W APE++ G FT SDVWS+G++L E+ T PY G++N +V+
Sbjct: 174 YTAREGAK--FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 231
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/234 (35%), Positives = 135/234 (57%), Gaps = 19/234 (8%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNE 172
D WEV R + +++ LG G FG V+ G +A V + FL E
Sbjct: 1 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVA-------VKSLKQGSMSPDAFLAE 53
Query: 173 ASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLS 232
A++MK +V+LY VV++ P +I E M G L ++L++ P T++
Sbjct: 54 ANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT--PSG------IKLTIN 104
Query: 233 RILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY-RKG 291
++L MAA++A+GMA++ ++ ++HRDL A N +V+D L+ K+ DFG+ R I + EY R+G
Sbjct: 105 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 164
Query: 292 SRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLN 345
++ P++W APE++ G FT SDVWS+G++L E+ T PY G++N +V+
Sbjct: 165 AK--FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 216
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 127/231 (54%), Gaps = 17/231 (7%)
Query: 115 WEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEAS 174
W + S++T + E+G+G FGLV+ G L + AIK E A E +F+ EA
Sbjct: 5 WVIDPSELTFVQEIGSGQFGLVHLGYW-----LNKDKVAIKTIREGAMSEE--DFIEEAE 57
Query: 175 VMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRI 234
VM +V+LYGV E P ++ E M G L +YLR+ +R +
Sbjct: 58 VMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRT---------QRGLFAAETL 108
Query: 235 LQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRG 294
L M +V +GMAYL + +HRDLAARNC+V ++ +KV DFGMTR + + +Y
Sbjct: 109 LGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK 168
Query: 295 FLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLN 345
F PV+W +PE ++S SDVWS+GV++WE+ + PY+ SN +V+
Sbjct: 169 F-PVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE 218
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 153 bits (386), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 127/231 (54%), Gaps = 17/231 (7%)
Query: 115 WEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEAS 174
W + S++T + E+G+G FGLV+ G L + AIK E A E +F+ EA
Sbjct: 3 WVIDPSELTFVQEIGSGQFGLVHLGYW-----LNKDKVAIKTIREGAMSEE--DFIEEAE 55
Query: 175 VMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRI 234
VM +V+LYGV E P ++ E M G L +YLR+ +R +
Sbjct: 56 VMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRT---------QRGLFAAETL 106
Query: 235 LQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRG 294
L M +V +GMAYL + +HRDLAARNC+V ++ +KV DFGMTR + + +Y
Sbjct: 107 LGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK 166
Query: 295 FLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLN 345
F PV+W +PE ++S SDVWS+GV++WE+ + PY+ SN +V+
Sbjct: 167 F-PVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE 216
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/254 (37%), Positives = 132/254 (51%), Gaps = 18/254 (7%)
Query: 99 NQLMGGDDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYR----GLIKDFRSLAEHPCAI 154
N + D +L WE R++++ LG G+FG V GLIK S A A+
Sbjct: 18 NNXVXIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIK---SDAAMTVAV 74
Query: 155 KVANENASEREKAEFLNEASVMKAFDTH-HVVKLYGVVSEGNPTLVIMELMGGGDLKNYL 213
K+ +A E+ ++E V+ H ++V L G + G PTLVI E GDL N+L
Sbjct: 75 KMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL 134
Query: 214 RSCRPDAETDVERSPPTLSRIL---------QMAAEVADGMAYLADKKFVHRDLAARNCM 264
R R D+ + SP + + +VA GMA+LA K +HRDLAARN +
Sbjct: 135 RRKR-DSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNIL 193
Query: 265 VADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVL 324
+ K+ DFG+ RDI Y LPV+WMAPES+ + V+T SDVWSYG+ L
Sbjct: 194 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFL 253
Query: 325 WEMATLASQPYQGL 338
WE+ +L S PY G+
Sbjct: 254 WELFSLGSSPYPGM 267
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/226 (37%), Positives = 125/226 (55%), Gaps = 17/226 (7%)
Query: 120 SKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAF 179
S++T + E+G+G FGLV+ G L + AIK E A E +F+ EA VM
Sbjct: 7 SELTFVQEIGSGQFGLVHLGYW-----LNKDKVAIKTIREGAMSEE--DFIEEAEVMMKL 59
Query: 180 DTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAA 239
+V+LYGV E P ++ E M G L +YLR+ +R +L M
Sbjct: 60 SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRT---------QRGLFAAETLLGMCL 110
Query: 240 EVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVR 299
+V +GMAYL + +HRDLAARNC+V ++ +KV DFGMTR + + +Y F PV+
Sbjct: 111 DVCEGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF-PVK 169
Query: 300 WMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLN 345
W +PE ++S SDVWS+GV++WE+ + PY+ SN +V+
Sbjct: 170 WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE 215
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/248 (37%), Positives = 130/248 (52%), Gaps = 18/248 (7%)
Query: 105 DDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYR----GLIKDFRSLAEHPCAIKVANEN 160
D +L WE R++++ LG G+FG V GLIK S A A+K+ +
Sbjct: 31 DPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIK---SDAAMTVAVKMLKPS 87
Query: 161 ASEREKAEFLNEASVMKAFDTH-HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPD 219
A E+ ++E V+ H ++V L G + G PTLVI E GDL N+LR R D
Sbjct: 88 AHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKR-D 146
Query: 220 AETDVERSPPTLSRIL---------QMAAEVADGMAYLADKKFVHRDLAARNCMVADDLT 270
+ + SP + + +VA GMA+LA K +HRDLAARN ++
Sbjct: 147 SFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRI 206
Query: 271 VKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATL 330
K+ DFG+ RDI Y LPV+WMAPES+ + V+T SDVWSYG+ LWE+ +L
Sbjct: 207 TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSL 266
Query: 331 ASQPYQGL 338
S PY G+
Sbjct: 267 GSSPYPGM 274
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/248 (37%), Positives = 130/248 (52%), Gaps = 18/248 (7%)
Query: 105 DDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYR----GLIKDFRSLAEHPCAIKVANEN 160
D +L WE R++++ LG G+FG V GLIK S A A+K+ +
Sbjct: 8 DPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIK---SDAAMTVAVKMLKPS 64
Query: 161 ASEREKAEFLNEASVMKAFDTH-HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPD 219
A E+ ++E V+ H ++V L G + G PTLVI E GDL N+LR R D
Sbjct: 65 AHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKR-D 123
Query: 220 AETDVERSPPTLSRIL---------QMAAEVADGMAYLADKKFVHRDLAARNCMVADDLT 270
+ + SP + + +VA GMA+LA K +HRDLAARN ++
Sbjct: 124 SFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRI 183
Query: 271 VKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATL 330
K+ DFG+ RDI Y LPV+WMAPES+ + V+T SDVWSYG+ LWE+ +L
Sbjct: 184 TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSL 243
Query: 331 ASQPYQGL 338
S PY G+
Sbjct: 244 GSSPYPGM 251
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/248 (37%), Positives = 130/248 (52%), Gaps = 18/248 (7%)
Query: 105 DDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYR----GLIKDFRSLAEHPCAIKVANEN 160
D +L WE R++++ LG G+FG V GLIK S A A+K+ +
Sbjct: 26 DPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIK---SDAAMTVAVKMLKPS 82
Query: 161 ASEREKAEFLNEASVMKAFDTH-HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPD 219
A E+ ++E V+ H ++V L G + G PTLVI E GDL N+LR R D
Sbjct: 83 AHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKR-D 141
Query: 220 AETDVERSPPTLSRIL---------QMAAEVADGMAYLADKKFVHRDLAARNCMVADDLT 270
+ + SP + + +VA GMA+LA K +HRDLAARN ++
Sbjct: 142 SFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRI 201
Query: 271 VKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATL 330
K+ DFG+ RDI Y LPV+WMAPES+ + V+T SDVWSYG+ LWE+ +L
Sbjct: 202 TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSL 261
Query: 331 ASQPYQGL 338
S PY G+
Sbjct: 262 GSSPYPGM 269
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/226 (37%), Positives = 125/226 (55%), Gaps = 17/226 (7%)
Query: 120 SKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAF 179
S++T + E+G+G FGLV+ G L + AIK E A E +F+ EA VM
Sbjct: 5 SELTFVQEIGSGQFGLVHLGYW-----LNKDKVAIKTIREGAMSEE--DFIEEAEVMMKL 57
Query: 180 DTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAA 239
+V+LYGV E P ++ E M G L +YLR+ +R +L M
Sbjct: 58 SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRT---------QRGLFAAETLLGMCL 108
Query: 240 EVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVR 299
+V +GMAYL + +HRDLAARNC+V ++ +KV DFGMTR + + +Y F PV+
Sbjct: 109 DVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF-PVK 167
Query: 300 WMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLN 345
W +PE ++S SDVWS+GV++WE+ + PY+ SN +V+
Sbjct: 168 WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE 213
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/226 (37%), Positives = 125/226 (55%), Gaps = 17/226 (7%)
Query: 120 SKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAF 179
S++T + E+G+G FGLV+ G L + AIK E A E +F+ EA VM
Sbjct: 7 SELTFVQEIGSGQFGLVHLGYW-----LNKDKVAIKTIREGAMSEE--DFIEEAEVMMKL 59
Query: 180 DTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAA 239
+V+LYGV E P ++ E M G L +YLR+ +R +L M
Sbjct: 60 SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRT---------QRGLFAAETLLGMCL 110
Query: 240 EVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVR 299
+V +GMAYL + +HRDLAARNC+V ++ +KV DFGMTR + + +Y F PV+
Sbjct: 111 DVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF-PVK 169
Query: 300 WMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLN 345
W +PE ++S SDVWS+GV++WE+ + PY+ SN +V+
Sbjct: 170 WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE 215
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 151 bits (381), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 89/243 (36%), Positives = 137/243 (56%), Gaps = 11/243 (4%)
Query: 110 YKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAE-HPCAIKVANENASEREKAE 168
Y WE R ++ + LG G+FG V A A+K+ E A+ E
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 169 FLNEASVMKAFDTH-HVVKLYGVVSE-GNPTLVIMELMGGGDLKNYLRSCRPD------A 220
++E ++ H +VV L G ++ G P +VI+E G+L YLRS R + A
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 136
Query: 221 ETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTR 280
D+ + TL ++ + +VA GM +LA +K +HRDLAARN ++++ VK+ DFG+ R
Sbjct: 137 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
Query: 281 DIY-ETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLS 339
DIY + + RKG LP++WMAPE++ D V+T SDVWS+GV+LWE+ +L + PY G+
Sbjct: 197 DIYKDPDXVRKGD-ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 255
Query: 340 NEQ 342
++
Sbjct: 256 IDE 258
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 151 bits (381), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 84/239 (35%), Positives = 135/239 (56%), Gaps = 19/239 (7%)
Query: 107 DKLYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREK 166
K ++KD+WE+ R + + +LG G FG V+ +A +K + E
Sbjct: 2 QKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVA-----VKTMKPGSMSVEA 56
Query: 167 AEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVER 226
FL EA+VMK +VKL+ VV++ P +I E M G L ++L+S E
Sbjct: 57 --FLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSD--------EG 105
Query: 227 SPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETE 286
S L +++ +A++A+GMA++ + ++HRDL A N +V+ L K+ DFG+ R I + E
Sbjct: 106 SKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE 165
Query: 287 YY-RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVL 344
Y R+G++ P++W APE++ G FT SDVWS+G++L E+ T PY G+SN +V+
Sbjct: 166 YTAREGAK--FPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI 222
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 151 bits (381), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 139/240 (57%), Gaps = 19/240 (7%)
Query: 107 DKLYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREK 166
K + +D WEV R + +++ LG G FG V+ G +A V +
Sbjct: 9 QKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVA-------VKSLKQGSMSP 61
Query: 167 AEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVER 226
FL EA++MK +V+LY VV++ P +I E M G L ++L++ + ++
Sbjct: 62 DAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT-----PSGIKL 115
Query: 227 SPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETE 286
T++++L MAA++A+GMA++ ++ ++HRDL A N +V+D L+ K+ DFG+ R I + E
Sbjct: 116 ---TINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 172
Query: 287 YY-RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLN 345
R+G++ P++W APE++ G FT SDVWS+G++L E+ T PY G++N +V+
Sbjct: 173 XTAREGAK--FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 230
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 151 bits (381), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 85/244 (34%), Positives = 136/244 (55%), Gaps = 19/244 (7%)
Query: 102 MGGDDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENA 161
M K ++KD+WE+ R + + +LG G FG V+ +A +K +
Sbjct: 170 MSSKPQKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVA-----VKTMKPGS 224
Query: 162 SEREKAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAE 221
E FL EA+VMK +VKL+ VV++ P +I E M G L ++L+S
Sbjct: 225 MSVEA--FLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSD----- 276
Query: 222 TDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRD 281
E S L +++ +A++A+GMA++ + ++HRDL A N +V+ L K+ DFG+ R
Sbjct: 277 ---EGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARV 333
Query: 282 IYETEYY-RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSN 340
I + EY R+G++ P++W APE++ G FT SDVWS+G++L E+ T PY G+SN
Sbjct: 334 IEDNEYTAREGAK--FPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN 391
Query: 341 EQVL 344
+V+
Sbjct: 392 PEVI 395
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 151 bits (381), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 137/240 (57%), Gaps = 19/240 (7%)
Query: 107 DKLYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREK 166
K + +D WEV R + +++ LG G FG V+ G +A V +
Sbjct: 6 QKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVA-------VKSLKQGSMSP 58
Query: 167 AEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVER 226
FL EA++MK +V+LY VV++ P +I E M G L ++L++ P
Sbjct: 59 DAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT--PSG------ 109
Query: 227 SPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETE 286
T++++L MAA++A+GMA++ ++ ++HRDL A N +V+D L+ K+ DFG+ R I + E
Sbjct: 110 IKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 169
Query: 287 YY-RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLN 345
R+G++ P++W APE++ G FT SDVWS+G++L E+ T PY G++N +V+
Sbjct: 170 XTAREGAK--FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 227
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 150 bits (380), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 137/240 (57%), Gaps = 19/240 (7%)
Query: 107 DKLYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREK 166
K + +D WEV R + +++ LG G FG V+ G +A V +
Sbjct: 1 QKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVA-------VKSLKQGSMSP 53
Query: 167 AEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVER 226
FL EA++MK +V+LY VV++ P +I E M G L ++L++ P
Sbjct: 54 DAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT--PSG------ 104
Query: 227 SPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETE 286
T++++L MAA++A+GMA++ ++ ++HRDL A N +V+D L+ K+ DFG+ R I + E
Sbjct: 105 IKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 164
Query: 287 YY-RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLN 345
R+G++ P++W APE++ G FT SDVWS+G++L E+ T PY G++N +V+
Sbjct: 165 XTAREGAK--FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 222
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 150 bits (380), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 137/240 (57%), Gaps = 19/240 (7%)
Query: 107 DKLYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREK 166
K + +D WEV R + +++ LG G FG V+ G +A V +
Sbjct: 2 QKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVA-------VKSLKQGSMSP 54
Query: 167 AEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVER 226
FL EA++MK +V+LY VV++ P +I E M G L ++L++ P
Sbjct: 55 DAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT--PSG------ 105
Query: 227 SPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETE 286
T++++L MAA++A+GMA++ ++ ++HRDL A N +V+D L+ K+ DFG+ R I + E
Sbjct: 106 IKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 165
Query: 287 YY-RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLN 345
R+G++ P++W APE++ G FT SDVWS+G++L E+ T PY G++N +V+
Sbjct: 166 XTAREGAK--FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 223
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 150 bits (380), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 137/240 (57%), Gaps = 19/240 (7%)
Query: 107 DKLYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREK 166
K + +D WEV R + +++ LG G FG V+ G +A V +
Sbjct: 8 QKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVA-------VKSLKQGSMSP 60
Query: 167 AEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVER 226
FL EA++MK +V+LY VV++ P +I E M G L ++L++ P
Sbjct: 61 DAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT--PSG------ 111
Query: 227 SPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETE 286
T++++L MAA++A+GMA++ ++ ++HRDL A N +V+D L+ K+ DFG+ R I + E
Sbjct: 112 IKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 171
Query: 287 YY-RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLN 345
R+G++ P++W APE++ G FT SDVWS+G++L E+ T PY G++N +V+
Sbjct: 172 XTAREGAK--FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 229
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 150 bits (380), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 83/239 (34%), Positives = 137/239 (57%), Gaps = 19/239 (7%)
Query: 108 KLYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
K + +D WEV R + +++ LG G FG V+ G +A V +
Sbjct: 1 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVA-------VKSLKQGSMSPD 53
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
FL EA++MK +V+LY VV++ P +I E M G L ++L++ P
Sbjct: 54 AFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT--PSG------I 104
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
T++++L MAA++A+GMA++ ++ ++HRDL A N +V+D L+ K+ DFG+ R I + E
Sbjct: 105 KLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX 164
Query: 288 Y-RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLN 345
R+G++ P++W APE++ G FT SDVWS+G++L E+ T PY G++N +V+
Sbjct: 165 TAREGAK--FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 221
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 150 bits (380), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 83/239 (34%), Positives = 137/239 (57%), Gaps = 19/239 (7%)
Query: 108 KLYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
K + +D WEV R + +++ LG G FG V+ G +A V +
Sbjct: 1 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVA-------VKSLKQGSMSPD 53
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
FL EA++MK +V+LY VV++ P +I E M G L ++L++ P
Sbjct: 54 AFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT--PSG------I 104
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
T++++L MAA++A+GMA++ ++ ++HRDL A N +V+D L+ K+ DFG+ R I + E
Sbjct: 105 KLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX 164
Query: 288 Y-RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLN 345
R+G++ P++W APE++ G FT SDVWS+G++L E+ T PY G++N +V+
Sbjct: 165 TAREGAK--FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 221
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 150 bits (380), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 86/236 (36%), Positives = 136/236 (57%), Gaps = 15/236 (6%)
Query: 116 EVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASV 175
E+ S++ I +G+G G V G ++ + P AIK +ER++ +FL+EAS+
Sbjct: 45 EIEASRIHIEKIIGSGDSGEVCYGRLR-VPGQRDVPVAIKALKAGYTERQRRDFLSEASI 103
Query: 176 MKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRIL 235
M FD ++++L GVV+ G +++ E M G L +LR+ D + T+ +++
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTH--DGQF-------TIMQLV 154
Query: 236 QMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTR---DIYETEYYRKGS 292
M V GM YL+D +VHRDLAARN +V +L KV DFG++R D + Y G
Sbjct: 155 GMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTG- 213
Query: 293 RGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVK 348
G +P+RW APE++ F+S SDVWS+GVV+WE+ +PY ++N V++ V+
Sbjct: 214 -GKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVE 268
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 130/233 (55%), Gaps = 18/233 (7%)
Query: 114 SWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEA 173
+WE+ R + ++ +LG G FG V+ G + +A V FL EA
Sbjct: 6 AWEIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVA-------VKTLKPGTMSVQAFLEEA 58
Query: 174 SVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSR 233
++MK +V+LY VV++ P +I E M G L ++L+S E L +
Sbjct: 59 NLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSD--------EGGKVLLPK 110
Query: 234 ILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY-RKGS 292
++ +A++A+GMAY+ K ++HRDL A N +V++ L K+ DFG+ R I + EY R+G+
Sbjct: 111 LIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGA 170
Query: 293 RGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLN 345
+ P++W APE++ G FT S+VWS+G++L+E+ T PY G +N V++
Sbjct: 171 K--FPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMS 221
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/236 (37%), Positives = 130/236 (55%), Gaps = 17/236 (7%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG+G+FG VY+GL + P AIK E S + E L+EA VM + D HV +L
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
G+ L IM+LM G L +Y+R + + + +L ++A GM Y
Sbjct: 84 LGICLTSTVQL-IMQLMPFGXLLDYVREHKDNIGSQY---------LLNWCVQIAKGMNY 133
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI--YETEYYRKGSRGFLPVRWMAPES 305
L D++ VHRDLAARN +V VK+ DFG+ + + E EY+ +G G +P++WMA ES
Sbjct: 134 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--GKVPIKWMALES 191
Query: 306 LKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSNEYKVNPPI 361
+ ++T SDVWSYGV +WE+ T S+PY G+ ++ + ++ E PPI
Sbjct: 192 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE---KGERLPQPPI 244
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/241 (36%), Positives = 136/241 (56%), Gaps = 9/241 (3%)
Query: 110 YKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDF-RSLAEHPCAIKVANENASEREKAE 168
Y WE R ++ + LG G+FG V ++ A+K+ E A+ E
Sbjct: 19 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA 78
Query: 169 FLNEASVMKAFDTH-HVVKLYGVVSE-GNPTLVIMELMGGGDLKNYLRSCR----PDAET 222
++E ++ H +VV L G ++ G P +VI+E G+L YLRS R P
Sbjct: 79 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPE 138
Query: 223 DVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI 282
D+ + TL ++ + +VA GM +LA +K +HRDLAARN ++++ VK+ DFG+ RDI
Sbjct: 139 DLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDI 198
Query: 283 Y-ETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNE 341
+ + RKG LP++WMAPE++ D V+T SDVWS+GV+LWE+ +L + PY G+ +
Sbjct: 199 XKDPDXVRKGD-ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 257
Query: 342 Q 342
+
Sbjct: 258 E 258
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/248 (37%), Positives = 129/248 (52%), Gaps = 18/248 (7%)
Query: 105 DDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYR----GLIKDFRSLAEHPCAIKVANEN 160
D +L WE R++++ LG G+FG V GLIK S A A+K+ +
Sbjct: 31 DPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIK---SDAAMTVAVKMLKPS 87
Query: 161 ASEREKAEFLNEASVMKAFDTH-HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPD 219
A E+ ++E V+ H ++V L G + G PTLVI E GDL N+LR R D
Sbjct: 88 AHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKR-D 146
Query: 220 AETDVERSPPTLSRIL---------QMAAEVADGMAYLADKKFVHRDLAARNCMVADDLT 270
+ + SP + + +VA GMA+LA K +HRDLAARN ++
Sbjct: 147 SFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRI 206
Query: 271 VKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATL 330
K+ DFG+ R I Y LPV+WMAPES+ + V+T SDVWSYG+ LWE+ +L
Sbjct: 207 TKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSL 266
Query: 331 ASQPYQGL 338
S PY G+
Sbjct: 267 GSSPYPGM 274
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 134/232 (57%), Gaps = 19/232 (8%)
Query: 115 WEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEAS 174
WEV R + +++ LG G FG V+ G +A V + FL EA+
Sbjct: 4 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVA-------VKSLKQGSMSPDAFLAEAN 56
Query: 175 VMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRI 234
+MK +V+LY VV++ P +I E M G L ++L++ P T++++
Sbjct: 57 LMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT--PSG------IKLTINKL 107
Query: 235 LQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY-RKGSR 293
L MAA++A+GMA++ ++ ++HR+L A N +V+D L+ K+ DFG+ R I + EY R+G++
Sbjct: 108 LDMAAQIAEGMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAK 167
Query: 294 GFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLN 345
P++W APE++ G FT SDVWS+G++L E+ T PY G++N +V+
Sbjct: 168 --FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 217
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/236 (37%), Positives = 130/236 (55%), Gaps = 17/236 (7%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG+G+FG VY+GL + P AIK E S + E L+EA VM + D HV +L
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
G+ L IM+LM G L +Y+R + + + +L ++A GM Y
Sbjct: 84 LGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQY---------LLNWCVQIAKGMNY 133
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI--YETEYYRKGSRGFLPVRWMAPES 305
L D++ VHRDLAARN +V VK+ DFG+ + + E EY+ +G G +P++WMA ES
Sbjct: 134 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--GKVPIKWMALES 191
Query: 306 LKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSNEYKVNPPI 361
+ ++T SDVWSYGV +WE+ T S+PY G+ ++ + ++ E PPI
Sbjct: 192 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE---KGERLPQPPI 244
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/236 (37%), Positives = 130/236 (55%), Gaps = 17/236 (7%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG+G+FG VY+GL + P AIK E S + E L+EA VM + D HV +L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
G+ L IM+LM G L +Y+R + + + +L ++A GM Y
Sbjct: 83 LGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQY---------LLNWCVQIAKGMNY 132
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI--YETEYYRKGSRGFLPVRWMAPES 305
L D++ VHRDLAARN +V VK+ DFG+ + + E EY+ +G G +P++WMA ES
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--GKVPIKWMALES 190
Query: 306 LKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSNEYKVNPPI 361
+ ++T SDVWSYGV +WE+ T S+PY G+ ++ + ++ E PPI
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE---KGERLPQPPI 243
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/236 (37%), Positives = 130/236 (55%), Gaps = 17/236 (7%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG+G+FG VY+GL + P AIK E S + E L+EA VM + D HV +L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
G+ L IM+LM G L +Y+R + + + +L ++A GM Y
Sbjct: 85 LGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQY---------LLNWCVQIAKGMNY 134
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI--YETEYYRKGSRGFLPVRWMAPES 305
L D++ VHRDLAARN +V VK+ DFG+ + + E EY+ +G G +P++WMA ES
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--GKVPIKWMALES 192
Query: 306 LKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSNEYKVNPPI 361
+ ++T SDVWSYGV +WE+ T S+PY G+ ++ + ++ E PPI
Sbjct: 193 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE---KGERLPQPPI 245
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/236 (37%), Positives = 130/236 (55%), Gaps = 17/236 (7%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG+G+FG VY+GL + P AIK E S + E L+EA VM + D HV +L
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
G+ L IM+LM G L +Y+R + + + +L ++A GM Y
Sbjct: 87 LGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQY---------LLNWCVQIAKGMNY 136
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI--YETEYYRKGSRGFLPVRWMAPES 305
L D++ VHRDLAARN +V VK+ DFG+ + + E EY+ +G G +P++WMA ES
Sbjct: 137 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--GKVPIKWMALES 194
Query: 306 LKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSNEYKVNPPI 361
+ ++T SDVWSYGV +WE+ T S+PY G+ ++ + ++ E PPI
Sbjct: 195 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE---KGERLPQPPI 247
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/236 (37%), Positives = 130/236 (55%), Gaps = 17/236 (7%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG+G+FG VY+GL + P AIK E S + E L+EA VM + D HV +L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
G+ L IM+LM G L +Y+R + + + +L ++A GM Y
Sbjct: 86 LGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQY---------LLNWCVQIAKGMNY 135
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI--YETEYYRKGSRGFLPVRWMAPES 305
L D++ VHRDLAARN +V VK+ DFG+ + + E EY+ +G G +P++WMA ES
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--GKVPIKWMALES 193
Query: 306 LKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSNEYKVNPPI 361
+ ++T SDVWSYGV +WE+ T S+PY G+ ++ + ++ E PPI
Sbjct: 194 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE---KGERLPQPPI 246
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/226 (36%), Positives = 125/226 (55%), Gaps = 17/226 (7%)
Query: 120 SKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAF 179
S++T + E+G+G FGLV+ G L + AIK E + + +F+ EA VM
Sbjct: 27 SELTFVQEIGSGQFGLVHLGYW-----LNKDKVAIKTIKEGSMSED--DFIEEAEVMMKL 79
Query: 180 DTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAA 239
+V+LYGV E P ++ E M G L +YLR+ +R +L M
Sbjct: 80 SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRT---------QRGLFAAETLLGMCL 130
Query: 240 EVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVR 299
+V +GMAYL + +HRDLAARNC+V ++ +KV DFGMTR + + +Y F PV+
Sbjct: 131 DVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF-PVK 189
Query: 300 WMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLN 345
W +PE ++S SDVWS+GV++WE+ + PY+ SN +V+
Sbjct: 190 WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE 235
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/234 (35%), Positives = 136/234 (58%), Gaps = 11/234 (4%)
Query: 116 EVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASV 175
E+ S++ I +G+G G V G ++ + P AIK +ER++ +FL+EAS+
Sbjct: 45 EIEASRIHIEKIIGSGDSGEVCYGRLR-VPGQRDVPVAIKALKAGYTERQRRDFLSEASI 103
Query: 176 MKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRIL 235
M FD ++++L GVV+ G +++ E M G L +LR+ D + T+ +++
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTH--DGQF-------TIMQLV 154
Query: 236 QMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYE-TEYYRKGSRG 294
M V GM YL+D +VHRDLAARN +V +L KV DFG++R + + + + G
Sbjct: 155 GMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGG 214
Query: 295 FLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVK 348
+P+RW APE++ F+S SDVWS+GVV+WE+ +PY ++N V++ V+
Sbjct: 215 KIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVE 268
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 148 bits (374), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 95/265 (35%), Positives = 133/265 (50%), Gaps = 29/265 (10%)
Query: 100 QLMGGDDDKLYKKD--------SWEVLRSKVTILDELGNGSFGLVYR----GLIKDFRSL 147
Q+ G D++ + D WE R + LG+G+FG V G+ K S+
Sbjct: 17 QVTGSSDNEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSI 76
Query: 148 AEHPCAIKVANENASEREKAEFLNEASVMKAFDTH-HVVKLYGVVSEGNPTLVIMELMGG 206
A+K+ E A E+ ++E +M +H ++V L G + P +I E
Sbjct: 77 Q---VAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCY 133
Query: 207 GDLKNYLRSCRPD-AETDVERSPP------------TLSRILQMAAEVADGMAYLADKKF 253
GDL NYLRS R +E ++E T +L A +VA GM +L K
Sbjct: 134 GDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC 193
Query: 254 VHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTS 313
VHRDLAARN +V VK+ DFG+ RDI Y LPV+WMAPESL +G++T
Sbjct: 194 VHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTI 253
Query: 314 HSDVWSYGVVLWEMATLASQPYQGL 338
SDVWSYG++LWE+ +L PY G+
Sbjct: 254 KSDVWSYGILLWEIFSLGVNPYPGI 278
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 148 bits (374), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 88/243 (36%), Positives = 136/243 (55%), Gaps = 11/243 (4%)
Query: 110 YKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAE-HPCAIKVANENASEREKAE 168
Y WE R ++ + LG G+FG V A A+K+ E A+ E
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 169 FLNEASVMKAFDTH-HVVKLYGVVSE-GNPTLVIMELMGGGDLKNYLRSCRPD------A 220
++E ++ H +VV L G ++ G P +VI+E G+L YLRS R + A
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 221 ETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTR 280
D+ + TL ++ + +VA GM +LA +K +HRDLAARN ++++ VK+ DFG+ R
Sbjct: 128 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
Query: 281 DIY-ETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLS 339
DI + + RKG LP++WMAPE++ D V+T SDVWS+GV+LWE+ +L + PY G+
Sbjct: 188 DIXKDPDXVRKGD-ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 246
Query: 340 NEQ 342
++
Sbjct: 247 IDE 249
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 148 bits (373), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 92/253 (36%), Positives = 132/253 (52%), Gaps = 19/253 (7%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLN 171
KD WE+ R + ++ LGNG FG V+ G AIK E FL
Sbjct: 1 KDVWEIPRESLQLIKRLGNGQFGEVWMGTWN-----GNTKVAIKTLKPGTMSPES--FLE 53
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
EA +MK +V+LY VVSE P ++ E M G L ++L+ D E L
Sbjct: 54 EAQIMKKLKHDKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLK--------DGEGRALKL 104
Query: 232 SRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY-RK 290
++ MAA+VA GMAY+ ++HRDL + N +V + L K+ DFG+ R I + E R+
Sbjct: 105 PNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQ 164
Query: 291 GSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGK 350
G++ P++W APE+ G FT SDVWS+G++L E+ T PY G++N +VL V+
Sbjct: 165 GAK--FPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERG 222
Query: 351 SSNEYKVNPPISL 363
+ PISL
Sbjct: 223 YRMPCPQDCPISL 235
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 148 bits (373), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 88/243 (36%), Positives = 136/243 (55%), Gaps = 11/243 (4%)
Query: 110 YKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAE-HPCAIKVANENASEREKAE 168
Y WE R ++ + LG G+FG V A A+K+ E A+ E
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 169 FLNEASVMKAFDTH-HVVKLYGVVSE-GNPTLVIMELMGGGDLKNYLRSCRPD------A 220
++E ++ H +VV L G ++ G P +VI+E G+L YLRS R + A
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 136
Query: 221 ETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTR 280
D+ + TL ++ + +VA GM +LA +K +HRDLAARN ++++ VK+ DFG+ R
Sbjct: 137 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
Query: 281 DIY-ETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLS 339
DI + + RKG LP++WMAPE++ D V+T SDVWS+GV+LWE+ +L + PY G+
Sbjct: 197 DIXKDPDXVRKGD-ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 255
Query: 340 NEQ 342
++
Sbjct: 256 IDE 258
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 148 bits (373), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 88/236 (37%), Positives = 129/236 (54%), Gaps = 17/236 (7%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG+G+FG VY+GL + P AIK E S + E L+EA VM + D HV +L
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
G+ L IM+LM G L +Y+R + + + +L ++A GM Y
Sbjct: 87 LGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQY---------LLNWCVQIAKGMNY 136
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI--YETEYYRKGSRGFLPVRWMAPES 305
L D++ VHRDLAARN +V VK+ DFG + + E EY+ +G G +P++WMA ES
Sbjct: 137 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG--GKVPIKWMALES 194
Query: 306 LKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSNEYKVNPPI 361
+ ++T SDVWSYGV +WE+ T S+PY G+ ++ + ++ E PPI
Sbjct: 195 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE---KGERLPQPPI 247
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 148 bits (373), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 88/236 (37%), Positives = 129/236 (54%), Gaps = 17/236 (7%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG+G+FG VY+GL + P AIK E S + E L+EA VM + D HV +L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
G+ L IM+LM G L +Y+R + + + +L ++A GM Y
Sbjct: 85 LGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQY---------LLNWCVQIAKGMNY 134
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI--YETEYYRKGSRGFLPVRWMAPES 305
L D++ VHRDLAARN +V VK+ DFG + + E EY+ +G G +P++WMA ES
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG--GKVPIKWMALES 192
Query: 306 LKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSNEYKVNPPI 361
+ ++T SDVWSYGV +WE+ T S+PY G+ ++ + ++ E PPI
Sbjct: 193 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE---KGERLPQPPI 245
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 148 bits (373), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 88/236 (37%), Positives = 129/236 (54%), Gaps = 17/236 (7%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG+G+FG VY+GL + P AIK E S + E L+EA VM + D HV +L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
G+ L IM+LM G L +Y+R + + + +L ++A GM Y
Sbjct: 85 LGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQY---------LLNWCVQIAKGMNY 134
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI--YETEYYRKGSRGFLPVRWMAPES 305
L D++ VHRDLAARN +V VK+ DFG + + E EY+ +G G +P++WMA ES
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG--GKVPIKWMALES 192
Query: 306 LKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSNEYKVNPPI 361
+ ++T SDVWSYGV +WE+ T S+PY G+ ++ + ++ E PPI
Sbjct: 193 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE---KGERLPQPPI 245
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 148 bits (373), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 138/248 (55%), Gaps = 17/248 (6%)
Query: 117 VLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVM 176
+ R V + LG G FG VY G+ + + + A+K ++ + K +F++EA +M
Sbjct: 9 IAREDVVLNRILGEGFFGEVYEGVYTNHKG-EKINVAVKTCKKDCTLDNKEKFMSEAVIM 67
Query: 177 KAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLS--RI 234
K D H+VKL G++ E PT +IMEL G+L +YL ER+ +L +
Sbjct: 68 KNLDHPHIVKLIGIIEE-EPTWIIMELYPYGELGHYL-----------ERNKNSLKVLTL 115
Query: 235 LQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRG 294
+ + ++ MAYL VHRD+A RN +VA VK+GDFG++R I + +YY K S
Sbjct: 116 VLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYY-KASVT 174
Query: 295 FLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV-KGKSSN 353
LP++WM+PES+ FT+ SDVW + V +WE+ + QP+ L N+ V+ + KG
Sbjct: 175 RLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLP 234
Query: 354 EYKVNPPI 361
+ + PP+
Sbjct: 235 KPDLCPPV 242
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 148 bits (373), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 138/248 (55%), Gaps = 17/248 (6%)
Query: 117 VLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVM 176
+ R V + LG G FG VY G+ + + + A+K ++ + K +F++EA +M
Sbjct: 5 IAREDVVLNRILGEGFFGEVYEGVYTNHKG-EKINVAVKTCKKDCTLDNKEKFMSEAVIM 63
Query: 177 KAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLS--RI 234
K D H+VKL G++ E PT +IMEL G+L +YL ER+ +L +
Sbjct: 64 KNLDHPHIVKLIGIIEE-EPTWIIMELYPYGELGHYL-----------ERNKNSLKVLTL 111
Query: 235 LQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRG 294
+ + ++ MAYL VHRD+A RN +VA VK+GDFG++R I + +YY K S
Sbjct: 112 VLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYY-KASVT 170
Query: 295 FLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV-KGKSSN 353
LP++WM+PES+ FT+ SDVW + V +WE+ + QP+ L N+ V+ + KG
Sbjct: 171 RLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLP 230
Query: 354 EYKVNPPI 361
+ + PP+
Sbjct: 231 KPDLCPPV 238
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 148 bits (373), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 92/237 (38%), Positives = 133/237 (56%), Gaps = 19/237 (8%)
Query: 128 LGNGSFGLVYRGL-IKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVK 186
LG+G+FG VY+G+ I D ++ + P AIKV EN S + E L+EA VM + +V +
Sbjct: 25 LGSGAFGTVYKGIWIPDGENV-KIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSR 83
Query: 187 LYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMA 246
L G+ LV +LM G L +++R R + +L ++A GM+
Sbjct: 84 LLGICLTSTVQLVT-QLMPYGCLLDHVRENRGRLGS---------QDLLNWCMQIAKGMS 133
Query: 247 YLADKKFVHRDLAARNCMVADDLTVKVGDFGMTR--DIYETEYYRKGSRGFLPVRWMAPE 304
YL D + VHRDLAARN +V VK+ DFG+ R DI ETEY+ G G +P++WMA E
Sbjct: 134 YLEDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADG--GKVPIKWMALE 191
Query: 305 SLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSNEYKVNPPI 361
S+ FT SDVWSYGV +WE+ T ++PY G+ ++ + ++ E PPI
Sbjct: 192 SILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLE---KGERLPQPPI 245
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 148 bits (373), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 82/239 (34%), Positives = 137/239 (57%), Gaps = 19/239 (7%)
Query: 108 KLYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
K + +D+WEV R + +++ LG G G V+ G +A V +
Sbjct: 1 KPWWEDAWEVPRETLKLVERLGAGQAGEVWMGYYNGHTKVA-------VKSLKQGSMSPD 53
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
FL EA++MK +V+LY VV++ P +I E M G L ++L++ P
Sbjct: 54 AFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT--PSG------I 104
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
T++++L MAA++A+GMA++ ++ ++HRDL A N +V+D L+ K+ DFG+ R I + E
Sbjct: 105 KLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEX 164
Query: 288 Y-RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLN 345
R+G++ P++W APE++ G FT SDVWS+G++L E+ T PY G++N +V+
Sbjct: 165 TAREGAK--FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 221
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 148 bits (373), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 138/248 (55%), Gaps = 17/248 (6%)
Query: 117 VLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVM 176
+ R V + LG G FG VY G+ + + + A+K ++ + K +F++EA +M
Sbjct: 21 IAREDVVLNRILGEGFFGEVYEGVYTNHKG-EKINVAVKTCKKDCTLDNKEKFMSEAVIM 79
Query: 177 KAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLS--RI 234
K D H+VKL G++ E PT +IMEL G+L +YL ER+ +L +
Sbjct: 80 KNLDHPHIVKLIGIIEE-EPTWIIMELYPYGELGHYL-----------ERNKNSLKVLTL 127
Query: 235 LQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRG 294
+ + ++ MAYL VHRD+A RN +VA VK+GDFG++R I + +YY K S
Sbjct: 128 VLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYY-KASVT 186
Query: 295 FLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV-KGKSSN 353
LP++WM+PES+ FT+ SDVW + V +WE+ + QP+ L N+ V+ + KG
Sbjct: 187 RLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLP 246
Query: 354 EYKVNPPI 361
+ + PP+
Sbjct: 247 KPDLCPPV 254
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 148 bits (373), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 87/236 (36%), Positives = 130/236 (55%), Gaps = 17/236 (7%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG+G+FG VY+GL + P AIK E S + E L+EA VM + D HV +L
Sbjct: 20 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 79
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
G+ L I +LM G L +Y+R + + + +L ++A+GM Y
Sbjct: 80 LGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQY---------LLNWCVQIAEGMNY 129
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI--YETEYYRKGSRGFLPVRWMAPES 305
L D++ VHRDLAARN +V VK+ DFG+ + + E EY+ +G G +P++WMA ES
Sbjct: 130 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--GKVPIKWMALES 187
Query: 306 LKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSNEYKVNPPI 361
+ ++T SDVWSYGV +WE+ T S+PY G+ ++ + ++ E PPI
Sbjct: 188 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE---KGERLPQPPI 240
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 147 bits (372), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 87/236 (36%), Positives = 129/236 (54%), Gaps = 17/236 (7%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG+G+FG VY+GL + P AIK E S + E L+EA VM + D HV +L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
G+ L I +LM G L +Y+R + + + +L ++A GM Y
Sbjct: 83 LGICLTSTVQL-ITQLMPFGXLLDYVREHKDNIGSQY---------LLNWCVQIAKGMNY 132
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI--YETEYYRKGSRGFLPVRWMAPES 305
L D++ VHRDLAARN +V VK+ DFG+ + + E EY+ +G G +P++WMA ES
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--GKVPIKWMALES 190
Query: 306 LKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSNEYKVNPPI 361
+ ++T SDVWSYGV +WE+ T S+PY G+ ++ + ++ E PPI
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE---KGERLPQPPI 243
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 147 bits (372), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 88/243 (36%), Positives = 135/243 (55%), Gaps = 11/243 (4%)
Query: 110 YKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAE-HPCAIKVANENASEREKAE 168
Y WE R ++ + LG G+FG V A A+K+ E A+ E
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 169 FLNEASVMKAFDTH-HVVKLYGVVSE-GNPTLVIMELMGGGDLKNYLRSCRPD------A 220
++E ++ H +VV L G ++ G P +VI E G+L YLRS R + A
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 221 ETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTR 280
D+ + TL ++ + +VA GM +LA +K +HRDLAARN ++++ VK+ DFG+ R
Sbjct: 128 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
Query: 281 DIY-ETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLS 339
DI + + RKG LP++WMAPE++ D V+T SDVWS+GV+LWE+ +L + PY G+
Sbjct: 188 DIXKDPDXVRKGD-ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 246
Query: 340 NEQ 342
++
Sbjct: 247 IDE 249
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 147 bits (372), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 91/238 (38%), Positives = 131/238 (55%), Gaps = 19/238 (7%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLN 171
KD+WE+ R + + +LG G FG V+ G +A IK E FL
Sbjct: 10 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVA-----IKTLKPGTMSPEA--FLQ 62
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
EA VMK +V+LY VVSE P ++ E M G L ++L+ R P
Sbjct: 63 EAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKG----EMGKYLRLP--- 114
Query: 232 SRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY-RK 290
+++ MAA++A GMAY+ +VHRDLAA N +V ++L KV DFG+ R I + EY R+
Sbjct: 115 -QLVDMAAQIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Query: 291 GSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVK 348
G++ P++W APE+ G FT SDVWS+G++L E+ T PY G+ N +VL+ V+
Sbjct: 174 GAK--FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 147 bits (372), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 87/236 (36%), Positives = 129/236 (54%), Gaps = 17/236 (7%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG+G+FG VY+GL + P AIK E S + E L+EA VM + D HV +L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
G+ L I +LM G L +Y+R + + + +L ++A GM Y
Sbjct: 83 LGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQY---------LLNWCVQIAKGMNY 132
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI--YETEYYRKGSRGFLPVRWMAPES 305
L D++ VHRDLAARN +V VK+ DFG+ + + E EY+ +G G +P++WMA ES
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--GKVPIKWMALES 190
Query: 306 LKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSNEYKVNPPI 361
+ ++T SDVWSYGV +WE+ T S+PY G+ ++ + ++ E PPI
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE---KGERLPQPPI 243
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 147 bits (371), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 92/238 (38%), Positives = 130/238 (54%), Gaps = 19/238 (7%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLN 171
KD+WE+ R + + +LG G FG V+ G +A IK E FL
Sbjct: 3 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVA-----IKTLKPGTMSPEA--FLQ 55
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
EA VMK +V+LY VVSE P ++ E M G L ++L+ ET P L
Sbjct: 56 EAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLK-----GETGKYLRLPQL 109
Query: 232 SRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY-RK 290
+ MAA++A GMAY+ +VHRDL A N +V ++L KV DFG+ R I + EY R+
Sbjct: 110 ---VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 166
Query: 291 GSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVK 348
G++ P++W APE+ G FT SDVWS+G++L E+ T PY G+ N +VL+ V+
Sbjct: 167 GAK--FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 222
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 147 bits (371), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 127/235 (54%), Gaps = 15/235 (6%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG+G+FG VY+G+ + P AIK+ NE + EF++EA +M + D H+V+L
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 188 YGVVSEGNPTL-VIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMA 246
GV +PT+ ++ +LM G L Y+ + + + + +L ++A GM
Sbjct: 106 LGVCL--SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQL---------LLNWCVQIAKGMM 154
Query: 247 YLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESL 306
YL +++ VHRDLAARN +V VK+ DFG+ R + E G +P++WMA E +
Sbjct: 155 YLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI 214
Query: 307 KDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSNEYKVNPPI 361
FT SDVWSYGV +WE+ T +PY G+ ++ + ++ E PPI
Sbjct: 215 HYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLE---KGERLPQPPI 266
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 147 bits (371), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 87/236 (36%), Positives = 129/236 (54%), Gaps = 17/236 (7%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG+G+FG VY+GL + P AIK E S + E L+EA VM + D HV +L
Sbjct: 17 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 76
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
G+ L I +LM G L +Y+R + + + +L ++A GM Y
Sbjct: 77 LGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQY---------LLNWCVQIAKGMNY 126
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI--YETEYYRKGSRGFLPVRWMAPES 305
L D++ VHRDLAARN +V VK+ DFG+ + + E EY+ +G G +P++WMA ES
Sbjct: 127 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--GKVPIKWMALES 184
Query: 306 LKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSNEYKVNPPI 361
+ ++T SDVWSYGV +WE+ T S+PY G+ ++ + ++ E PPI
Sbjct: 185 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE---KGERLPQPPI 237
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 147 bits (371), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 87/236 (36%), Positives = 129/236 (54%), Gaps = 17/236 (7%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG+G+FG VY+GL + P AIK E S + E L+EA VM + D HV +L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
G+ L I +LM G L +Y+R + + + +L ++A GM Y
Sbjct: 83 LGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQY---------LLNWCVQIAKGMNY 132
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI--YETEYYRKGSRGFLPVRWMAPES 305
L D++ VHRDLAARN +V VK+ DFG+ + + E EY+ +G G +P++WMA ES
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--GKVPIKWMALES 190
Query: 306 LKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSNEYKVNPPI 361
+ ++T SDVWSYGV +WE+ T S+PY G+ ++ + ++ E PPI
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE---KGERLPQPPI 243
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/236 (36%), Positives = 129/236 (54%), Gaps = 17/236 (7%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG+G+FG VY+GL + P AIK E S + E L+EA VM + D HV +L
Sbjct: 33 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 92
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
G+ L I +LM G L +Y+R + + + +L ++A GM Y
Sbjct: 93 LGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQY---------LLNWCVQIAKGMNY 142
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI--YETEYYRKGSRGFLPVRWMAPES 305
L D++ VHRDLAARN +V VK+ DFG+ + + E EY+ +G G +P++WMA ES
Sbjct: 143 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--GKVPIKWMALES 200
Query: 306 LKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSNEYKVNPPI 361
+ ++T SDVWSYGV +WE+ T S+PY G+ ++ + ++ E PPI
Sbjct: 201 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE---KGERLPQPPI 253
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/242 (35%), Positives = 135/242 (55%), Gaps = 10/242 (4%)
Query: 110 YKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAE-HPCAIKVANENASEREKAE 168
Y WE R ++ + LG G+FG V A A+K+ E A+ E
Sbjct: 18 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 77
Query: 169 FLNEASVMKAFDTH-HVVKLYGVVSE-GNPTLVIMELMGGGDLKNYLRSCRPD-----AE 221
++E ++ H +VV L G ++ G P +VI+E G+L YLRS R +
Sbjct: 78 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTP 137
Query: 222 TDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRD 281
D+ + TL ++ + +VA GM +LA +K +HRDLAARN ++++ VK+ DFG+ RD
Sbjct: 138 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 197
Query: 282 IY-ETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSN 340
I + + RKG LP++WMAPE++ D V+T SDVWS+GV+LWE+ +L + PY G+
Sbjct: 198 IXKDPDXVRKGD-ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 256
Query: 341 EQ 342
++
Sbjct: 257 DE 258
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/238 (38%), Positives = 130/238 (54%), Gaps = 19/238 (7%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLN 171
KD+WE+ R + + +LG G FG V+ G +A IK E FL
Sbjct: 176 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVA-----IKTLKPGTMSPEA--FLQ 228
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
EA VMK +V+LY VVSE P ++ E M G L ++L+ ET P L
Sbjct: 229 EAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLK-----GETGKYLRLPQL 282
Query: 232 SRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY-RK 290
+ MAA++A GMAY+ +VHRDL A N +V ++L KV DFG+ R I + EY R+
Sbjct: 283 ---VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 339
Query: 291 GSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVK 348
G++ P++W APE+ G FT SDVWS+G++L E+ T PY G+ N +VL+ V+
Sbjct: 340 GAK--FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 395
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/238 (38%), Positives = 130/238 (54%), Gaps = 19/238 (7%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLN 171
KD+WE+ R + + +LG G FG V+ G +A IK E FL
Sbjct: 176 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVA-----IKTLKPGTMSPEA--FLQ 228
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
EA VMK +V+LY VVSE P ++ E M G L ++L+ ET P L
Sbjct: 229 EAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLK-----GETGKYLRLPQL 282
Query: 232 SRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY-RK 290
+ MAA++A GMAY+ +VHRDL A N +V ++L KV DFG+ R I + EY R+
Sbjct: 283 ---VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 339
Query: 291 GSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVK 348
G++ P++W APE+ G FT SDVWS+G++L E+ T PY G+ N +VL+ V+
Sbjct: 340 GAK--FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 395
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/236 (36%), Positives = 129/236 (54%), Gaps = 17/236 (7%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
L +G+FG VY+GL + P AIK E S + E L+EA VM + D HV +L
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
G+ L IM+LM G L +Y+R + + + +L ++A GM Y
Sbjct: 90 LGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQY---------LLNWCVQIAKGMNY 139
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI--YETEYYRKGSRGFLPVRWMAPES 305
L D++ VHRDLAARN +V VK+ DFG+ + + E EY+ +G G +P++WMA ES
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--GKVPIKWMALES 197
Query: 306 LKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSNEYKVNPPI 361
+ ++T SDVWSYGV +WE+ T S+PY G+ ++ + ++ E PPI
Sbjct: 198 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE---KGERLPQPPI 250
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/236 (36%), Positives = 129/236 (54%), Gaps = 17/236 (7%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG+G+FG VY+GL + P AIK E S + E L+EA VM + D HV +L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
G+ L I +LM G L +Y+R + + + +L ++A GM Y
Sbjct: 85 LGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQY---------LLNWCVQIAKGMNY 134
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI--YETEYYRKGSRGFLPVRWMAPES 305
L D++ VHRDLAARN +V VK+ DFG+ + + E EY+ +G G +P++WMA ES
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--GKVPIKWMALES 192
Query: 306 LKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSNEYKVNPPI 361
+ ++T SDVWSYGV +WE+ T S+PY G+ ++ + ++ E PPI
Sbjct: 193 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE---KGERLPQPPI 245
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/236 (36%), Positives = 129/236 (54%), Gaps = 17/236 (7%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG+G+FG VY+GL + P AIK E S + E L+EA VM + D HV +L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
G+ L I +LM G L +Y+R + + + +L ++A GM Y
Sbjct: 86 LGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQY---------LLNWCVQIAKGMNY 135
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI--YETEYYRKGSRGFLPVRWMAPES 305
L D++ VHRDLAARN +V VK+ DFG+ + + E EY+ +G G +P++WMA ES
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--GKVPIKWMALES 193
Query: 306 LKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSNEYKVNPPI 361
+ ++T SDVWSYGV +WE+ T S+PY G+ ++ + ++ E PPI
Sbjct: 194 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE---KGERLPQPPI 246
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/236 (36%), Positives = 129/236 (54%), Gaps = 17/236 (7%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG+G+FG VY+GL + P AIK E S + E L+EA VM + D HV +L
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
G+ L I +LM G L +Y+R + + + +L ++A GM Y
Sbjct: 90 LGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQY---------LLNWCVQIAKGMNY 139
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI--YETEYYRKGSRGFLPVRWMAPES 305
L D++ VHRDLAARN +V VK+ DFG+ + + E EY+ +G G +P++WMA ES
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--GKVPIKWMALES 197
Query: 306 LKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSNEYKVNPPI 361
+ ++T SDVWSYGV +WE+ T S+PY G+ ++ + ++ E PPI
Sbjct: 198 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE---KGERLPQPPI 250
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/236 (36%), Positives = 129/236 (54%), Gaps = 17/236 (7%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG+G+FG VY+GL + P AIK E S + E L+EA VM + D HV +L
Sbjct: 29 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 88
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
G+ L I +LM G L +Y+R + + + +L ++A GM Y
Sbjct: 89 LGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQY---------LLNWCVQIAKGMNY 138
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI--YETEYYRKGSRGFLPVRWMAPES 305
L D++ VHRDLAARN +V VK+ DFG+ + + E EY+ +G G +P++WMA ES
Sbjct: 139 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--GKVPIKWMALES 196
Query: 306 LKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSNEYKVNPPI 361
+ ++T SDVWSYGV +WE+ T S+PY G+ ++ + ++ E PPI
Sbjct: 197 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE---KGERLPQPPI 249
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/236 (36%), Positives = 129/236 (54%), Gaps = 17/236 (7%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG+G+FG VY+GL + P AIK E S + E L+EA VM + D HV +L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
G+ L I +LM G L +Y+R + + + +L ++A GM Y
Sbjct: 86 LGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQY---------LLNWCVQIAKGMNY 135
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI--YETEYYRKGSRGFLPVRWMAPES 305
L D++ VHRDLAARN +V VK+ DFG+ + + E EY+ +G G +P++WMA ES
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--GKVPIKWMALES 193
Query: 306 LKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSNEYKVNPPI 361
+ ++T SDVWSYGV +WE+ T S+PY G+ ++ + ++ E PPI
Sbjct: 194 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE---KGERLPQPPI 246
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/236 (36%), Positives = 129/236 (54%), Gaps = 17/236 (7%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG+G+FG VY+GL + P AIK E S + E L+EA VM + D HV +L
Sbjct: 48 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 107
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
G+ L I +LM G L +Y+R + + + +L ++A GM Y
Sbjct: 108 LGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQY---------LLNWCVQIAKGMNY 157
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI--YETEYYRKGSRGFLPVRWMAPES 305
L D++ VHRDLAARN +V VK+ DFG+ + + E EY+ +G G +P++WMA ES
Sbjct: 158 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--GKVPIKWMALES 215
Query: 306 LKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSNEYKVNPPI 361
+ ++T SDVWSYGV +WE+ T S+PY G+ ++ + ++ E PPI
Sbjct: 216 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE---KGERLPQPPI 268
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/236 (36%), Positives = 129/236 (54%), Gaps = 17/236 (7%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG+G+FG VY+GL + P AIK E S + E L+EA VM + D HV +L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
G+ L I +LM G L +Y+R + + + +L ++A GM Y
Sbjct: 86 LGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQY---------LLNWCVQIAKGMNY 135
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI--YETEYYRKGSRGFLPVRWMAPES 305
L D++ VHRDLAARN +V VK+ DFG+ + + E EY+ +G G +P++WMA ES
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--GKVPIKWMALES 193
Query: 306 LKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSNEYKVNPPI 361
+ ++T SDVWSYGV +WE+ T S+PY G+ ++ + ++ E PPI
Sbjct: 194 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE---KGERLPQPPI 246
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/238 (38%), Positives = 131/238 (55%), Gaps = 19/238 (7%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLN 171
KD+WE+ R + + +LG G FG V+ G +A IK E FL
Sbjct: 10 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVA-----IKTLKPGTMSPEA--FLQ 62
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
EA VMK +V+LY VVSE P ++ME M G L ++L+ R P
Sbjct: 63 EAQVMKKLRHEKLVQLYAVVSE-EPIYIVMEYMSKGCLLDFLKG----EMGKYLRLP--- 114
Query: 232 SRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY-RK 290
+++ MAA++A GMAY+ +VHRDL A N +V ++L KV DFG+ R I + EY R+
Sbjct: 115 -QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Query: 291 GSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVK 348
G++ P++W APE+ G FT SDVWS+G++L E+ T PY G+ N +VL+ V+
Sbjct: 174 GAK--FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/238 (38%), Positives = 130/238 (54%), Gaps = 19/238 (7%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLN 171
KD+WE+ R + + +LG G FG V+ G +A IK E FL
Sbjct: 259 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVA-----IKTLKPGTMSPEA--FLQ 311
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
EA VMK +V+LY VVSE P ++ E M G L ++L+ ET P L
Sbjct: 312 EAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLK-----GETGKYLRLPQL 365
Query: 232 SRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY-RK 290
+ MAA++A GMAY+ +VHRDL A N +V ++L KV DFG+ R I + EY R+
Sbjct: 366 ---VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 422
Query: 291 GSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVK 348
G++ P++W APE+ G FT SDVWS+G++L E+ T PY G+ N +VL+ V+
Sbjct: 423 GAK--FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 478
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 127/235 (54%), Gaps = 15/235 (6%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG+G+FG VY+G+ + P AIK+ NE + EF++EA +M + D H+V+L
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 188 YGVVSEGNPTL-VIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMA 246
GV +PT+ ++ +LM G L Y+ + + + + +L ++A GM
Sbjct: 83 LGVCL--SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQL---------LLNWCVQIAKGMM 131
Query: 247 YLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESL 306
YL +++ VHRDLAARN +V VK+ DFG+ R + E G +P++WMA E +
Sbjct: 132 YLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI 191
Query: 307 KDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSNEYKVNPPI 361
FT SDVWSYGV +WE+ T +PY G+ ++ + ++ E PPI
Sbjct: 192 HYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLE---KGERLPQPPI 243
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/238 (38%), Positives = 130/238 (54%), Gaps = 19/238 (7%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLN 171
KD+WE+ R + + +LG G FG V+ G +A IK E FL
Sbjct: 176 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVA-----IKTLKPGTMSPEA--FLQ 228
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
EA VMK +V+LY VVSE P ++ E M G L ++L+ ET P L
Sbjct: 229 EAQVMKKLRHEKLVQLYAVVSE-EPIYIVGEYMSKGSLLDFLK-----GETGKYLRLPQL 282
Query: 232 SRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY-RK 290
+ MAA++A GMAY+ +VHRDL A N +V ++L KV DFG+ R I + EY R+
Sbjct: 283 ---VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 339
Query: 291 GSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVK 348
G++ P++W APE+ G FT SDVWS+G++L E+ T PY G+ N +VL+ V+
Sbjct: 340 GAK--FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 395
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 131/238 (55%), Gaps = 19/238 (7%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLN 171
KD+WE+ R + + +LG G FG V+ G +A IK E FL
Sbjct: 10 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVA-----IKTLKPGTMSPEA--FLQ 62
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
EA VMK +V+LY VVSE P +++E M G L ++L+ R P
Sbjct: 63 EAQVMKKLRHEKLVQLYAVVSE-EPIYIVIEYMSKGSLLDFLKG----EMGKYLRLP--- 114
Query: 232 SRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY-RK 290
+++ MAA++A GMAY+ +VHRDL A N +V ++L KV DFG+ R I + EY R+
Sbjct: 115 -QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Query: 291 GSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVK 348
G++ P++W APE+ G FT SDVWS+G++L E+ T PY G+ N +VL+ V+
Sbjct: 174 GAK--FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/238 (38%), Positives = 130/238 (54%), Gaps = 19/238 (7%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLN 171
KD+WE+ R + + +LG G FG V+ G +A IK E FL
Sbjct: 7 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVA-----IKTLKPGTMSPEA--FLQ 59
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
EA VMK +V+LY VVSE P ++ E M G L ++L+ ET P L
Sbjct: 60 EAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLK-----GETGKYLRLPQL 113
Query: 232 SRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY-RK 290
+ M+A++A GMAY+ +VHRDL A N +V ++L KV DFG+ R I + EY R+
Sbjct: 114 ---VDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 170
Query: 291 GSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVK 348
G++ P++W APE+ G FT SDVWS+G++L E+ T PY G+ N +VL+ V+
Sbjct: 171 GAK--FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 226
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/236 (36%), Positives = 128/236 (54%), Gaps = 17/236 (7%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG+G+FG VY+GL + P AIK E S + E L+EA VM + D HV +L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
G+ L I +LM G L +Y+R + + + +L ++A GM Y
Sbjct: 83 LGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQY---------LLNWCVQIAKGMNY 132
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI--YETEYYRKGSRGFLPVRWMAPES 305
L D++ VHRDLAARN +V VK+ DFG + + E EY+ +G G +P++WMA ES
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG--GKVPIKWMALES 190
Query: 306 LKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSNEYKVNPPI 361
+ ++T SDVWSYGV +WE+ T S+PY G+ ++ + ++ E PPI
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE---KGERLPQPPI 243
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/236 (36%), Positives = 128/236 (54%), Gaps = 17/236 (7%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG+G+FG VY+GL + P AIK E S + E L+EA VM + D HV +L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
G+ L I +LM G L +Y+R + + + +L ++A GM Y
Sbjct: 85 LGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQY---------LLNWCVQIAKGMNY 134
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI--YETEYYRKGSRGFLPVRWMAPES 305
L D++ VHRDLAARN +V VK+ DFG + + E EY+ +G G +P++WMA ES
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG--GKVPIKWMALES 192
Query: 306 LKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSNEYKVNPPI 361
+ ++T SDVWSYGV +WE+ T S+PY G+ ++ + ++ E PPI
Sbjct: 193 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE---KGERLPQPPI 245
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/236 (36%), Positives = 128/236 (54%), Gaps = 17/236 (7%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG+G+FG VY+GL + P AIK E S + E L+EA VM + D HV +L
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
G+ L I +LM G L +Y+R + + + +L ++A GM Y
Sbjct: 90 LGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQY---------LLNWCVQIAKGMNY 139
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI--YETEYYRKGSRGFLPVRWMAPES 305
L D++ VHRDLAARN +V VK+ DFG + + E EY+ +G G +P++WMA ES
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG--GKVPIKWMALES 197
Query: 306 LKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSNEYKVNPPI 361
+ ++T SDVWSYGV +WE+ T S+PY G+ ++ + ++ E PPI
Sbjct: 198 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE---KGERLPQPPI 250
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 130/238 (54%), Gaps = 19/238 (7%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLN 171
KD+WE+ R + + +LG G FG V+ G +A IK E FL
Sbjct: 10 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVA-----IKTLKPGTMSPEA--FLQ 62
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
EA VMK +V+LY VVSE P ++ E M G L ++L+ R P
Sbjct: 63 EAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKG----EMGKYLRLP--- 114
Query: 232 SRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY-RK 290
+++ MAA++A GMAY+ +VHRDL A N +V ++L KV DFG+ R I + EY R+
Sbjct: 115 -QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Query: 291 GSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVK 348
G++ P++W APE+ G FT SDVWS+G++L E+ T PY G+ N +VL+ V+
Sbjct: 174 GAK--FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 130/238 (54%), Gaps = 19/238 (7%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLN 171
KD+WE+ R + + +LG G FG V+ G +A IK E FL
Sbjct: 1 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVA-----IKTLKPGTMSPEA--FLQ 53
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
EA VMK +V+LY VVSE P ++ E M G L ++L+ R P
Sbjct: 54 EAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKG----EMGKYLRLP--- 105
Query: 232 SRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY-RK 290
+++ MAA++A GMAY+ +VHRDL A N +V ++L KV DFG+ R I + EY R+
Sbjct: 106 -QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 164
Query: 291 GSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVK 348
G++ P++W APE+ G FT SDVWS+G++L E+ T PY G+ N +VL+ V+
Sbjct: 165 GAK--FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 220
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 130/238 (54%), Gaps = 19/238 (7%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLN 171
KD+WE+ R + + +LG G FG V+ G +A IK E FL
Sbjct: 10 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVA-----IKTLKPGTMSPEA--FLQ 62
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
EA VMK +V+LY VVSE P ++ E M G L ++L+ R P
Sbjct: 63 EAQVMKKIRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKG----EMGKYLRLP--- 114
Query: 232 SRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY-RK 290
+++ MAA++A GMAY+ +VHRDL A N +V ++L KV DFG+ R I + EY R+
Sbjct: 115 -QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Query: 291 GSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVK 348
G++ P++W APE+ G FT SDVWS+G++L E+ T PY G+ N +VL+ V+
Sbjct: 174 GAK--FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 130/238 (54%), Gaps = 19/238 (7%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLN 171
KD+WE+ R + + +LG G FG V+ G +A IK E FL
Sbjct: 10 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVA-----IKTLKPGTMSPEA--FLQ 62
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
EA VMK +V+LY VVSE P ++ E M G L ++L+ R P
Sbjct: 63 EAQVMKKLRHEKLVQLYAVVSE-EPIYIVCEYMSKGSLLDFLKG----EMGKYLRLP--- 114
Query: 232 SRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY-RK 290
+++ MAA++A GMAY+ +VHRDL A N +V ++L KV DFG+ R I + EY R+
Sbjct: 115 -QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Query: 291 GSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVK 348
G++ P++W APE+ G FT SDVWS+G++L E+ T PY G+ N +VL+ V+
Sbjct: 174 GAK--FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 91/249 (36%), Positives = 136/249 (54%), Gaps = 18/249 (7%)
Query: 122 VTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDT 181
+ D +G G+FG V + IK + AIK E AS+ + +F E V+
Sbjct: 17 IKFQDVIGEGNFGQVLKARIK--KDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 182 H-HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETD-----VERSPPTLS--R 233
H +++ L G + +E G+L ++LR R ETD + TLS +
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRV-LETDPAFAIANSTASTLSSQQ 133
Query: 234 ILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSR 293
+L AA+VA GM YL+ K+F+HRDLAARN +V ++ K+ DFG++R E Y K +
Sbjct: 134 LLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRG---QEVYVKKTM 190
Query: 294 GFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSN 353
G LPVRWMA ESL V+T++SDVWSYGV+LWE+ +L PY G++ ++ K
Sbjct: 191 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYE----KLPQ 246
Query: 354 EYKVNPPIS 362
Y++ P++
Sbjct: 247 GYRLEKPLN 255
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 91/249 (36%), Positives = 136/249 (54%), Gaps = 18/249 (7%)
Query: 122 VTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDT 181
+ D +G G+FG V + IK + AIK E AS+ + +F E V+
Sbjct: 27 IKFQDVIGEGNFGQVLKARIK--KDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 182 H-HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETD-----VERSPPTLS--R 233
H +++ L G + +E G+L ++LR R ETD + TLS +
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRV-LETDPAFAIANSTASTLSSQQ 143
Query: 234 ILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSR 293
+L AA+VA GM YL+ K+F+HRDLAARN +V ++ K+ DFG++R E Y K +
Sbjct: 144 LLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRG---QEVYVKKTM 200
Query: 294 GFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSN 353
G LPVRWMA ESL V+T++SDVWSYGV+LWE+ +L PY G++ ++ K
Sbjct: 201 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYE----KLPQ 256
Query: 354 EYKVNPPIS 362
Y++ P++
Sbjct: 257 GYRLEKPLN 265
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 145 bits (365), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/236 (36%), Positives = 128/236 (54%), Gaps = 17/236 (7%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG+G+FG VY+GL + P AI E S + E L+EA VM + D HV +L
Sbjct: 57 LGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRL 116
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
G+ L I +LM G L +Y+R + + + +L ++A GM Y
Sbjct: 117 LGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQY---------LLNWCVQIAKGMNY 166
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI--YETEYYRKGSRGFLPVRWMAPES 305
L D++ VHRDLAARN +V VK+ DFG+ + + E EY+ +G G +P++WMA ES
Sbjct: 167 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--GKVPIKWMALES 224
Query: 306 LKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSNEYKVNPPI 361
+ ++T SDVWSYGV +WE+ T S+PY G+ ++ + ++ E PPI
Sbjct: 225 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE---KGERLPQPPI 277
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 86/236 (36%), Positives = 128/236 (54%), Gaps = 17/236 (7%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
L +G+FG VY+GL + P AIK E S + E L+EA VM + D HV +L
Sbjct: 23 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
G+ L I +LM G L +Y+R + + + +L ++A GM Y
Sbjct: 83 LGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQY---------LLNWCVQIAKGMNY 132
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI--YETEYYRKGSRGFLPVRWMAPES 305
L D++ VHRDLAARN +V VK+ DFG+ + + E EY+ +G G +P++WMA ES
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--GKVPIKWMALES 190
Query: 306 LKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSNEYKVNPPI 361
+ ++T SDVWSYGV +WE+ T S+PY G+ ++ + ++ E PPI
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE---KGERLPQPPI 243
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 144 bits (364), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 86/236 (36%), Positives = 128/236 (54%), Gaps = 17/236 (7%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
L +G+FG VY+GL + P AIK E S + E L+EA VM + D HV +L
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
G+ L I +LM G L +Y+R + + + +L ++A GM Y
Sbjct: 90 LGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQY---------LLNWCVQIAKGMNY 139
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI--YETEYYRKGSRGFLPVRWMAPES 305
L D++ VHRDLAARN +V VK+ DFG+ + + E EY+ +G G +P++WMA ES
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--GKVPIKWMALES 197
Query: 306 LKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSNEYKVNPPI 361
+ ++T SDVWSYGV +WE+ T S+PY G+ ++ + ++ E PPI
Sbjct: 198 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE---KGERLPQPPI 250
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 144 bits (363), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 130/238 (54%), Gaps = 19/238 (7%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLN 171
KD+WE+ R + + +LG G FG V+ G +A IK E FL
Sbjct: 10 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVA-----IKTLKPGTMSPEA--FLQ 62
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
EA VMK +V+LY VVSE P ++ E M G L ++L+ R P
Sbjct: 63 EAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGCLLDFLKG----EMGKYLRLP--- 114
Query: 232 SRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY-RK 290
+++ MAA++A GMAY+ +VHRDL A N +V ++L KV DFG+ R I + EY R+
Sbjct: 115 -QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Query: 291 GSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVK 348
G++ P++W APE+ G FT SDVWS+G++L E+ T PY G+ N +VL+ V+
Sbjct: 174 GAK--FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 144 bits (363), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 130/238 (54%), Gaps = 19/238 (7%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLN 171
KD+WE+ R + + +LG G FG V+ G +A IK E FL
Sbjct: 7 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVA-----IKTLKPGTMSPEA--FLQ 59
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
EA VMK +V+LY VVSE P ++ E M G L ++L+ ET P L
Sbjct: 60 EAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLK-----GETGKYLRLPQL 113
Query: 232 SRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY-RK 290
+ M+A++A GMAY+ +VHRDL A N +V ++L KV DFG+ R I + E+ R+
Sbjct: 114 ---VDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQ 170
Query: 291 GSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVK 348
G++ P++W APE+ G FT SDVWS+G++L E+ T PY G+ N +VL+ V+
Sbjct: 171 GAK--FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 226
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 130/238 (54%), Gaps = 19/238 (7%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLN 171
KD+WE+ R + + +LG G FG V+ G +A IK E FL
Sbjct: 177 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVA-----IKTLKPGNMSPEA--FLQ 229
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
EA VMK +V+LY VVSE P ++ E M G L ++L+ R P
Sbjct: 230 EAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKG----EMGKYLRLP--- 281
Query: 232 SRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY-RK 290
+++ MAA++A GMAY+ +VHRDL A N +V ++L KV DFG+ R I + EY R+
Sbjct: 282 -QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQ 340
Query: 291 GSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVK 348
G++ P++W APE+ G FT SDVWS+G++L E+ T PY G+ N +VL+ V+
Sbjct: 341 GAK--FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 396
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/249 (36%), Positives = 136/249 (54%), Gaps = 18/249 (7%)
Query: 122 VTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDT 181
+ D +G G+FG V + IK + AIK E AS+ + +F E V+
Sbjct: 24 IKFQDVIGEGNFGQVLKARIK--KDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 182 H-HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETD-----VERSPPTLS--R 233
H +++ L G + +E G+L ++LR R ETD + TLS +
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRV-LETDPAFAIANSTASTLSSQQ 140
Query: 234 ILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSR 293
+L AA+VA GM YL+ K+F+HR+LAARN +V ++ K+ DFG++R E Y K +
Sbjct: 141 LLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRG---QEVYVKKTM 197
Query: 294 GFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSN 353
G LPVRWMA ESL V+T++SDVWSYGV+LWE+ +L PY G++ ++ K
Sbjct: 198 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYE----KLPQ 253
Query: 354 EYKVNPPIS 362
Y++ P++
Sbjct: 254 GYRLEKPLN 262
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/238 (37%), Positives = 130/238 (54%), Gaps = 19/238 (7%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLN 171
KD+WE+ R + + +LG G FG V+ G +A IK E FL
Sbjct: 10 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVA-----IKTLKPGTMSPEA--FLQ 62
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
EA VMK +V+LY VVSE P +++E M G L ++L+ R P
Sbjct: 63 EAQVMKKLRHEKLVQLYAVVSE-EPIYIVIEYMSKGSLLDFLKG----EMGKYLRLP--- 114
Query: 232 SRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY-RK 290
+++ MAA++A GMAY+ +VHRDL A N +V ++L KV DFG+ R I + E R+
Sbjct: 115 -QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQ 173
Query: 291 GSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVK 348
G++ P++W APE+ G FT SDVWS+G++L E+ T PY G+ N +VL+ V+
Sbjct: 174 GAK--FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/237 (37%), Positives = 128/237 (54%), Gaps = 19/237 (8%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNE 172
D+WE+ R + + +LG G FG V+ G +A IK E FL E
Sbjct: 1 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVA-----IKTLKPGTMSPEA--FLQE 53
Query: 173 ASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLS 232
A VMK +V+LY VVSE P ++ E M G L ++L+ ET P L
Sbjct: 54 AQVMKKLRHEKLVQLYAVVSE-EPIXIVTEYMSKGSLLDFLK-----GETGKYLRLPQL- 106
Query: 233 RILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY-RKG 291
+ MAA++A GMAY+ +VHRDL A N +V ++L KV DFG+ R I + E R+G
Sbjct: 107 --VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQG 164
Query: 292 SRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVK 348
++ P++W APE+ G FT SDVWS+G++L E+ T PY G+ N +VL+ V+
Sbjct: 165 AK--FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 219
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 88/236 (37%), Positives = 128/236 (54%), Gaps = 19/236 (8%)
Query: 114 SWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEA 173
+WE+ R + + +LG G FG V+ G +A IK E FL EA
Sbjct: 1 AWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVA-----IKTLKPGTMSPEA--FLQEA 53
Query: 174 SVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSR 233
VMK +V+LY VVSE P ++ E M G L ++L+ R P +
Sbjct: 54 QVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKG----EMGKYLRLP----Q 104
Query: 234 ILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY-RKGS 292
++ MAA++A GMAY+ +VHRDL A N +V ++L KV DFG+ R I + EY R+G+
Sbjct: 105 LVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 164
Query: 293 RGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVK 348
+ P++W APE+ G FT SDVWS+G++L E+ T PY G+ N +VL+ V+
Sbjct: 165 K--FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 218
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 141 bits (355), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 130/243 (53%), Gaps = 27/243 (11%)
Query: 102 MGGDDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENA 161
M K ++KD+WE+ R + + +LG G FG V+ +A +K +
Sbjct: 164 MSSKPQKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVA-----VKTMKPGS 218
Query: 162 SEREKAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAE 221
E FL EA+VMK +VKL+ VV++ P +I E M G L ++L+S
Sbjct: 219 MSVEA--FLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSD----- 270
Query: 222 TDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRD 281
E S L +++ +A++A+GMA++ + ++HRDL A N +V+ L K+ DFG+ R
Sbjct: 271 ---EGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLAR- 326
Query: 282 IYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNE 341
G++ P++W APE++ G FT SDVWS+G++L E+ T PY G+SN
Sbjct: 327 --------VGAK--FPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP 376
Query: 342 QVL 344
+V+
Sbjct: 377 EVI 379
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 141 bits (355), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 146/296 (49%), Gaps = 66/296 (22%)
Query: 110 YKKDSWEVLRSKVTILDELGNGSFGLVYRGL---IKDFRSLAEHPCAIKVANENASEREK 166
Y WE R ++ + LG G+FG V + IK +S A+K+ E A+ E
Sbjct: 17 YDASKWEFARERLKLGKSLGRGAFGKVVQASAFGIK--KSPTCRTVAVKMLKEGATASEY 74
Query: 167 AEFLNEASVMKAFDTH-HVVKLYGVVS-EGNPTLVIMELMGGGDLKNYLRSCR------- 217
+ E ++ H +VV L G + +G P +VI+E G+L NYL+S R
Sbjct: 75 KALMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDLFFLNK 134
Query: 218 -------PDAE----------------------------------TDVE---------RS 227
P E +DVE +
Sbjct: 135 DAALHMEPKKEKMEPGLEQGKKPRLDSVTSSESFASSGFQEDKSLSDVEEEEDSDGFYKE 194
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET-E 286
P T+ ++ + +VA GM +L+ +K +HRDLAARN +++++ VK+ DFG+ RDIY+ +
Sbjct: 195 PITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPD 254
Query: 287 YYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQ 342
Y RKG LP++WMAPES+ D ++++ SDVWSYGV+LWE+ +L PY G+ ++
Sbjct: 255 YVRKGDTR-LPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDE 309
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/245 (33%), Positives = 134/245 (54%), Gaps = 20/245 (8%)
Query: 106 DDKLYKKDSWEVLRSKVTILD-ELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASER 164
D KL+ K R + I D ELG G+FG V +G+ + + + AIKV + +
Sbjct: 1 DKKLFLK------RDNLLIADIELGCGNFGSVRQGVYRMRKKQID--VAIKVLKQGTEKA 52
Query: 165 EKAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDV 224
+ E + EA +M D ++V+L GV + +++ME+ GGG L +L
Sbjct: 53 DTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVG--------- 102
Query: 225 ERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI-Y 283
+R +S + ++ +V+ GM YL +K FVHRDLAARN ++ + K+ DFG+++ +
Sbjct: 103 KREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGA 162
Query: 284 ETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
+ YY S G P++W APE + F+S SDVWSYGV +WE + +PY+ + +V
Sbjct: 163 DDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV 222
Query: 344 LNWVK 348
+ +++
Sbjct: 223 MAFIE 227
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 82/245 (33%), Positives = 135/245 (55%), Gaps = 20/245 (8%)
Query: 106 DDKLYKKDSWEVLRSKVTILD-ELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASER 164
D KL+ K R + I D ELG G+FG V +G+ + + + AIKV + +
Sbjct: 327 DKKLFLK------RDNLLIADIELGCGNFGSVRQGVYRMRKKQID--VAIKVLKQGTEKA 378
Query: 165 EKAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDV 224
+ E + EA +M D ++V+L GV + +++ME+ GGG L +L R
Sbjct: 379 DTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKR------- 430
Query: 225 ERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI-Y 283
E P +S + ++ +V+ GM YL +K FVHR+LAARN ++ + K+ DFG+++ +
Sbjct: 431 EEIP--VSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGA 488
Query: 284 ETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
+ YY S G P++W APE + F+S SDVWSYGV +WE + +PY+ + +V
Sbjct: 489 DDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV 548
Query: 344 LNWVK 348
+ +++
Sbjct: 549 MAFIE 553
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/263 (34%), Positives = 140/263 (53%), Gaps = 31/263 (11%)
Query: 102 MGGD---DDKLYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVAN 158
MGG D+ Y+ W + ++ +L +G G FG V G D+R + A+K
Sbjct: 1 MGGSVAAQDEFYR-SGWALNMKELKLLQTIGKGEFGDVMLG---DYRG---NKVAVKCIK 53
Query: 159 ENASEREKAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTL-VIMELMGGGDLKNYLRSCR 217
+A+ + FL EASVM ++V+L GV+ E L ++ E M G L +YLRS
Sbjct: 54 NDATAQA---FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRS-- 108
Query: 218 PDAETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFG 277
RS +L+ + +V + M YL FVHRDLAARN +V++D KV DFG
Sbjct: 109 ------RGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFG 162
Query: 278 MTRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQG 337
+T++ T+ G LPV+W APE+L++ F++ SDVWS+G++LWE+ + PY
Sbjct: 163 LTKEASSTQ-----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPR 217
Query: 338 LSNEQVLNWVKGKSSNEYKVNPP 360
+ + V+ V+ YK++ P
Sbjct: 218 IPLKDVVPRVE----KGYKMDAP 236
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 126/227 (55%), Gaps = 14/227 (6%)
Query: 122 VTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA--EFLNEASVMKAF 179
+ +L++LG+GSFG+V RG D S A+K + + +A +F+ E + M +
Sbjct: 10 LRLLEKLGDGSFGVVRRGEW-DAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 68
Query: 180 DTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAA 239
D ++++LYGVV P ++ EL G L + LR + L + + A
Sbjct: 69 DHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRK---------HQGHFLLGTLSRYAV 118
Query: 240 EVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET-EYYRKGSRGFLPV 298
+VA+GM YL K+F+HRDLAARN ++A VK+GDFG+ R + + ++Y +P
Sbjct: 119 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPF 178
Query: 299 RWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLN 345
W APESLK F+ SD W +GV LWEM T +P+ GL+ Q+L+
Sbjct: 179 AWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH 225
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 126/227 (55%), Gaps = 14/227 (6%)
Query: 122 VTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA--EFLNEASVMKAF 179
+ +L++LG+GSFG+V RG D S A+K + + +A +F+ E + M +
Sbjct: 14 LRLLEKLGDGSFGVVRRGEW-DAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 72
Query: 180 DTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAA 239
D ++++LYGVV P ++ EL G L + LR + L + + A
Sbjct: 73 DHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRK---------HQGHFLLGTLSRYAV 122
Query: 240 EVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET-EYYRKGSRGFLPV 298
+VA+GM YL K+F+HRDLAARN ++A VK+GDFG+ R + + ++Y +P
Sbjct: 123 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPF 182
Query: 299 RWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLN 345
W APESLK F+ SD W +GV LWEM T +P+ GL+ Q+L+
Sbjct: 183 AWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH 229
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 82/225 (36%), Positives = 125/225 (55%), Gaps = 14/225 (6%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA--EFLNEASVMKAFDT 181
+L++LG+GSFG+V RG D S A+K + + +A +F+ E + M + D
Sbjct: 16 LLEKLGDGSFGVVRRGEW-DAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 74
Query: 182 HHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEV 241
++++LYGVV P ++ EL G L + LR + L + + A +V
Sbjct: 75 RNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRK---------HQGHFLLGTLSRYAVQV 124
Query: 242 ADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET-EYYRKGSRGFLPVRW 300
A+GM YL K+F+HRDLAARN ++A VK+GDFG+ R + + ++Y +P W
Sbjct: 125 AEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 184
Query: 301 MAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLN 345
APESLK F+ SD W +GV LWEM T +P+ GL+ Q+L+
Sbjct: 185 CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH 229
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 134 bits (338), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 126/227 (55%), Gaps = 14/227 (6%)
Query: 122 VTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA--EFLNEASVMKAF 179
+ +L++LG+GSFG+V RG D S A+K + + +A +F+ E + M +
Sbjct: 10 LRLLEKLGDGSFGVVRRGEW-DAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 68
Query: 180 DTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAA 239
D ++++LYGVV P ++ EL G L + LR + L + + A
Sbjct: 69 DHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRK---------HQGHFLLGTLSRYAV 118
Query: 240 EVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET-EYYRKGSRGFLPV 298
+VA+GM YL K+F+HRDLAARN ++A VK+GDFG+ R + + ++Y +P
Sbjct: 119 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPF 178
Query: 299 RWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLN 345
W APESLK F+ SD W +GV LWEM T +P+ GL+ Q+L+
Sbjct: 179 AWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH 225
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 134 bits (338), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 126/227 (55%), Gaps = 14/227 (6%)
Query: 122 VTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA--EFLNEASVMKAF 179
+ +L++LG+GSFG+V RG D S A+K + + +A +F+ E + M +
Sbjct: 20 LRLLEKLGDGSFGVVRRGEW-DAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 78
Query: 180 DTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAA 239
D ++++LYGVV P ++ EL G L + LR + L + + A
Sbjct: 79 DHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRK---------HQGHFLLGTLSRYAV 128
Query: 240 EVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET-EYYRKGSRGFLPV 298
+VA+GM YL K+F+HRDLAARN ++A VK+GDFG+ R + + ++Y +P
Sbjct: 129 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPF 188
Query: 299 RWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLN 345
W APESLK F+ SD W +GV LWEM T +P+ GL+ Q+L+
Sbjct: 189 AWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH 235
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 134 bits (338), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 133/247 (53%), Gaps = 27/247 (10%)
Query: 115 WEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEAS 174
W + ++ +L +G G FG V G D+R + A+K +A+ + FL EAS
Sbjct: 7 WALNMKELKLLQTIGKGEFGDVMLG---DYRG---NKVAVKCIKNDATAQA---FLAEAS 57
Query: 175 VMKAFDTHHVVKLYGVVSEGNPTL-VIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSR 233
VM ++V+L GV+ E L ++ E M G L +YLRS RS
Sbjct: 58 VMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRS--------RGRSVLGGDC 109
Query: 234 ILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSR 293
+L+ + +V + M YL FVHRDLAARN +V++D KV DFG+T++ T+
Sbjct: 110 LLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-----DT 164
Query: 294 GFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSN 353
G LPV+W APE+L++ F++ SDVWS+G++LWE+ + PY + + V+ V+
Sbjct: 165 GKLPVKWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE----K 220
Query: 354 EYKVNPP 360
YK++ P
Sbjct: 221 GYKMDAP 227
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 134 bits (336), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 88/255 (34%), Positives = 137/255 (53%), Gaps = 28/255 (10%)
Query: 107 DKLYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREK 166
D+ Y+ W + ++ +L +G G FG V G D+R + A+K +A+ +
Sbjct: 181 DEFYR-SGWALNMKELKLLQTIGKGEFGDVMLG---DYRG---NKVAVKCIKNDATAQA- 232
Query: 167 AEFLNEASVMKAFDTHHVVKLYGVVSEGNPTL-VIMELMGGGDLKNYLRSCRPDAETDVE 225
FL EASVM ++V+L GV+ E L ++ E M G L +YLRS
Sbjct: 233 --FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRS--------RG 282
Query: 226 RSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
RS +L+ + +V + M YL FVHRDLAARN +V++D KV DFG+T++ T
Sbjct: 283 RSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 342
Query: 286 EYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLN 345
+ G LPV+W APE+L++ F++ SDVWS+G++LWE+ + PY + + V+
Sbjct: 343 Q-----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVP 397
Query: 346 WVKGKSSNEYKVNPP 360
V+ YK++ P
Sbjct: 398 RVE----KGYKMDAP 408
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 126/227 (55%), Gaps = 14/227 (6%)
Query: 119 RSKVTILD-ELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMK 177
R +T+ D ELG+G+FG V +G + + + I + NE K E L EA+VM+
Sbjct: 5 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKI-LKNEANDPALKDELLAEANVMQ 63
Query: 178 AFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQM 237
D ++V++ G+ E +++ME+ G L YL+ R + + I+++
Sbjct: 64 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKN----------IIEL 112
Query: 238 AAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETE-YYRKGSRGFL 296
+V+ GM YL + FVHRDLAARN ++ K+ DFG+++ + E YY+ + G
Sbjct: 113 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 172
Query: 297 PVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
PV+W APE + F+S SDVWS+GV++WE + +PY+G+ +V
Sbjct: 173 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 219
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 140/293 (47%), Gaps = 61/293 (20%)
Query: 110 YKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAE-HPCAIKVANENASEREKAE 168
Y WE R ++ + LG G+FG V A A+K+ E A+ E
Sbjct: 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 71
Query: 169 FLNEASVMKAFDTH-HVVKLYGVVSE-GNPTLVIMELMGGGDLKNYLRSCRPD------- 219
++E ++ H +VV L G ++ G P +VI+E G+L YLRS R +
Sbjct: 72 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTK 131
Query: 220 ------------------------------------------AETDVERSPPTLSR---- 233
++ + E +P L +
Sbjct: 132 GARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLT 191
Query: 234 ---ILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIY-ETEYYR 289
++ + +VA GM +LA +K +HRDLAARN ++++ VK+ DFG+ RDIY + +Y R
Sbjct: 192 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 251
Query: 290 KGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQ 342
KG LP++WMAPE++ D V+T SDVWS+GV+LWE+ +L + PY G+ ++
Sbjct: 252 KGD-ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 303
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 140/293 (47%), Gaps = 61/293 (20%)
Query: 110 YKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAE-HPCAIKVANENASEREKAE 168
Y WE R ++ + LG G+FG V A A+K+ E A+ E
Sbjct: 10 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 69
Query: 169 FLNEASVMKAFDTH-HVVKLYGVVSE-GNPTLVIMELMGGGDLKNYLRSCRPD------- 219
++E ++ H +VV L G ++ G P +VI+E G+L YLRS R +
Sbjct: 70 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTK 129
Query: 220 ------------------------------------------AETDVERSPPTLSR---- 233
++ + E +P L +
Sbjct: 130 GARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLT 189
Query: 234 ---ILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIY-ETEYYR 289
++ + +VA GM +LA +K +HRDLAARN ++++ VK+ DFG+ RDIY + +Y R
Sbjct: 190 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 249
Query: 290 KGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQ 342
KG LP++WMAPE++ D V+T SDVWS+GV+LWE+ +L + PY G+ ++
Sbjct: 250 KGD-ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 301
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 126/227 (55%), Gaps = 14/227 (6%)
Query: 119 RSKVTILD-ELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMK 177
R +T+ D ELG+G+FG V +G + + + I + NE K E L EA+VM+
Sbjct: 3 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKI-LKNEANDPALKDELLAEANVMQ 61
Query: 178 AFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQM 237
D ++V++ G+ E +++ME+ G L YL+ R + + I+++
Sbjct: 62 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKN----------IIEL 110
Query: 238 AAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETE-YYRKGSRGFL 296
+V+ GM YL + FVHRDLAARN ++ K+ DFG+++ + E YY+ + G
Sbjct: 111 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 170
Query: 297 PVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
PV+W APE + F+S SDVWS+GV++WE + +PY+G+ +V
Sbjct: 171 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 217
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 126/227 (55%), Gaps = 14/227 (6%)
Query: 119 RSKVTILD-ELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMK 177
R +T+ D ELG+G+FG V +G + + + I + NE K E L EA+VM+
Sbjct: 9 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKI-LKNEANDPALKDELLAEANVMQ 67
Query: 178 AFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQM 237
D ++V++ G+ E +++ME+ G L YL+ R + + I+++
Sbjct: 68 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKN----------IIEL 116
Query: 238 AAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETE-YYRKGSRGFL 296
+V+ GM YL + FVHRDLAARN ++ K+ DFG+++ + E YY+ + G
Sbjct: 117 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 176
Query: 297 PVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
PV+W APE + F+S SDVWS+GV++WE + +PY+G+ +V
Sbjct: 177 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 223
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 126/227 (55%), Gaps = 14/227 (6%)
Query: 119 RSKVTILD-ELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMK 177
R +T+ D ELG+G+FG V +G + + + I + NE K E L EA+VM+
Sbjct: 23 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKI-LKNEANDPALKDELLAEANVMQ 81
Query: 178 AFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQM 237
D ++V++ G+ E +++ME+ G L YL+ R + + I+++
Sbjct: 82 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKN----------IIEL 130
Query: 238 AAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETE-YYRKGSRGFL 296
+V+ GM YL + FVHRDLAARN ++ K+ DFG+++ + E YY+ + G
Sbjct: 131 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 190
Query: 297 PVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
PV+W APE + F+S SDVWS+GV++WE + +PY+G+ +V
Sbjct: 191 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 237
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 126/227 (55%), Gaps = 14/227 (6%)
Query: 119 RSKVTILD-ELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMK 177
R +T+ D ELG+G+FG V +G + + + I + NE K E L EA+VM+
Sbjct: 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKI-LKNEANDPALKDELLAEANVMQ 73
Query: 178 AFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQM 237
D ++V++ G+ E +++ME+ G L YL+ R + + I+++
Sbjct: 74 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKN----------IIEL 122
Query: 238 AAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETE-YYRKGSRGFL 296
+V+ GM YL + FVHRDLAARN ++ K+ DFG+++ + E YY+ + G
Sbjct: 123 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 182
Query: 297 PVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
PV+W APE + F+S SDVWS+GV++WE + +PY+G+ +V
Sbjct: 183 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 229
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 126/227 (55%), Gaps = 14/227 (6%)
Query: 119 RSKVTILD-ELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMK 177
R +T+ D ELG+G+FG V +G + + + I + NE K E L EA+VM+
Sbjct: 25 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKI-LKNEANDPALKDELLAEANVMQ 83
Query: 178 AFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQM 237
D ++V++ G+ E +++ME+ G L YL+ R + + I+++
Sbjct: 84 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKN----------IIEL 132
Query: 238 AAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETE-YYRKGSRGFL 296
+V+ GM YL + FVHRDLAARN ++ K+ DFG+++ + E YY+ + G
Sbjct: 133 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 192
Query: 297 PVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
PV+W APE + F+S SDVWS+GV++WE + +PY+G+ +V
Sbjct: 193 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 239
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 126/227 (55%), Gaps = 14/227 (6%)
Query: 119 RSKVTILD-ELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMK 177
R +T+ D ELG+G+FG V +G + + + I + NE K E L EA+VM+
Sbjct: 25 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKI-LKNEANDPALKDELLAEANVMQ 83
Query: 178 AFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQM 237
D ++V++ G+ E +++ME+ G L YL+ R + + I+++
Sbjct: 84 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKN----------IIEL 132
Query: 238 AAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETE-YYRKGSRGFL 296
+V+ GM YL + FVHRDLAARN ++ K+ DFG+++ + E YY+ + G
Sbjct: 133 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 192
Query: 297 PVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
PV+W APE + F+S SDVWS+GV++WE + +PY+G+ +V
Sbjct: 193 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 239
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 140/293 (47%), Gaps = 61/293 (20%)
Query: 110 YKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAE-HPCAIKVANENASEREKAE 168
Y WE R ++ + LG G+FG V A A+K+ E A+ E
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 169 FLNEASVMKAFDTH-HVVKLYGVVSE-GNPTLVIMELMGGGDLKNYLRSCRPD------- 219
++E ++ H +VV L G ++ G P +VI+E G+L YLRS R +
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTK 136
Query: 220 ------------------------------------------AETDVERSPPTLSR---- 233
++ + E +P L +
Sbjct: 137 GARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLT 196
Query: 234 ---ILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIY-ETEYYR 289
++ + +VA GM +LA +K +HRDLAARN ++++ VK+ DFG+ RDIY + +Y R
Sbjct: 197 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 256
Query: 290 KGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQ 342
KG LP++WMAPE++ D V+T SDVWS+GV+LWE+ +L + PY G+ ++
Sbjct: 257 KGD-ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 308
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 133/247 (53%), Gaps = 27/247 (10%)
Query: 115 WEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEAS 174
W + ++ +L +G G FG V G D+R + A+K +A+ + FL EAS
Sbjct: 1 WALNMKELKLLQTIGKGEFGDVMLG---DYRG---NKVAVKCIKNDATAQA---FLAEAS 51
Query: 175 VMKAFDTHHVVKLYGVVSEGNPTL-VIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSR 233
VM ++V+L GV+ E L ++ E M G L +YLRS RS
Sbjct: 52 VMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRS--------RGRSVLGGDC 103
Query: 234 ILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSR 293
+L+ + +V + M YL FVHRDLAARN +V++D KV DFG+T++ T+
Sbjct: 104 LLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-----DT 158
Query: 294 GFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSN 353
G LPV+W APE+L++ F++ SDVWS+G++LWE+ + PY + + V+ V+
Sbjct: 159 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE----K 214
Query: 354 EYKVNPP 360
YK++ P
Sbjct: 215 GYKMDAP 221
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 140/293 (47%), Gaps = 61/293 (20%)
Query: 110 YKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAE-HPCAIKVANENASEREKAE 168
Y WE R ++ + LG G+FG V A A+K+ E A+ E
Sbjct: 19 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 78
Query: 169 FLNEASVMKAFDTH-HVVKLYGVVSE-GNPTLVIMELMGGGDLKNYLRSCRPD------- 219
++E ++ H +VV L G ++ G P +VI+E G+L YLRS R +
Sbjct: 79 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTK 138
Query: 220 ------------------------------------------AETDVERSPPTLSR---- 233
++ + E +P L +
Sbjct: 139 GARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLT 198
Query: 234 ---ILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIY-ETEYYR 289
++ + +VA GM +LA +K +HRDLAARN ++++ VK+ DFG+ RDIY + +Y R
Sbjct: 199 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 258
Query: 290 KGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQ 342
KG LP++WMAPE++ D V+T SDVWS+GV+LWE+ +L + PY G+ ++
Sbjct: 259 KGD-ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 310
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 126/227 (55%), Gaps = 14/227 (6%)
Query: 119 RSKVTILD-ELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMK 177
R +T+ D ELG+G+FG V +G + + + I + NE K E L EA+VM+
Sbjct: 367 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKI-LKNEANDPALKDELLAEANVMQ 425
Query: 178 AFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQM 237
D ++V++ G+ E +++ME+ G L YL+ R + + I+++
Sbjct: 426 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKN----------IIEL 474
Query: 238 AAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETE-YYRKGSRGFL 296
+V+ GM YL + FVHRDLAARN ++ K+ DFG+++ + E YY+ + G
Sbjct: 475 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 534
Query: 297 PVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
PV+W APE + F+S SDVWS+GV++WE + +PY+G+ +V
Sbjct: 535 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 581
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 126/227 (55%), Gaps = 14/227 (6%)
Query: 119 RSKVTILD-ELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMK 177
R +T+ D ELG+G+FG V +G + + + I + NE K E L EA+VM+
Sbjct: 368 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKI-LKNEANDPALKDELLAEANVMQ 426
Query: 178 AFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQM 237
D ++V++ G+ E +++ME+ G L YL+ R + + I+++
Sbjct: 427 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKN----------IIEL 475
Query: 238 AAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETE-YYRKGSRGFL 296
+V+ GM YL + FVHRDLAARN ++ K+ DFG+++ + E YY+ + G
Sbjct: 476 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 535
Query: 297 PVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
PV+W APE + F+S SDVWS+GV++WE + +PY+G+ +V
Sbjct: 536 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 582
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 125/227 (55%), Gaps = 14/227 (6%)
Query: 122 VTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA--EFLNEASVMKAF 179
+ +L++LG+GSFG+V RG D S A+K + + +A +F+ E + M +
Sbjct: 10 LRLLEKLGDGSFGVVRRGEW-DAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 68
Query: 180 DTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAA 239
D ++++LYGVV P ++ EL G L + LR + L + + A
Sbjct: 69 DHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRK---------HQGHFLLGTLSRYAV 118
Query: 240 EVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET-EYYRKGSRGFLPV 298
+VA+GM YL K+F+HRDLAARN ++A VK+GDFG+ R + + ++ +P
Sbjct: 119 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPF 178
Query: 299 RWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLN 345
W APESLK F+ SD W +GV LWEM T +P+ GL+ Q+L+
Sbjct: 179 AWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH 225
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 127/232 (54%), Gaps = 24/232 (10%)
Query: 122 VTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA--EFLNEASVMKAF 179
+ +L++LG+GSFG+V RG D S A+K + + +A +F+ E + M +
Sbjct: 20 LRLLEKLGDGSFGVVRRGEW-DAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 78
Query: 180 DTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAA 239
D ++++LYGVV P ++ EL G L + LR + L + + A
Sbjct: 79 DHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRK---------HQGHFLLGTLSRYAV 128
Query: 240 EVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET------EYYRKGSR 293
+VA+GM YL K+F+HRDLAARN ++A VK+GDFG+ R + + + +RK
Sbjct: 129 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRK--- 185
Query: 294 GFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLN 345
+P W APESLK F+ SD W +GV LWEM T +P+ GL+ Q+L+
Sbjct: 186 --VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH 235
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 125/227 (55%), Gaps = 14/227 (6%)
Query: 119 RSKVTILD-ELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMK 177
R +T+ D ELG+G+FG V +G + + + I + NE K E L EA+VM+
Sbjct: 9 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKI-LKNEANDPALKDELLAEANVMQ 67
Query: 178 AFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQM 237
D ++V++ G+ E +++ME+ G L YL+ R + + I+++
Sbjct: 68 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKN----------IIEL 116
Query: 238 AAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETE-YYRKGSRGFL 296
+V+ GM YL + FVHRDLAARN ++ K+ DFG+++ + E Y+ + G
Sbjct: 117 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKW 176
Query: 297 PVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
PV+W APE + F+S SDVWS+GV++WE + +PY+G+ +V
Sbjct: 177 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 223
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 120/221 (54%), Gaps = 13/221 (5%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLN 171
+D + + L +LG G+FG V + A+K ++++E +F
Sbjct: 3 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFER 61
Query: 172 EASVMKAFDTHHVVKLYGVV-SEGNPTL-VIMELMGGGDLKNYLRSCRPDAETDVERSPP 229
E ++K+ ++VK GV S G L +IME + G L++YL+ + +
Sbjct: 62 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH------- 114
Query: 230 TLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI-YETEYY 288
++LQ +++ GM YL K+++HR+LA RN +V ++ VK+GDFG+T+ + + EYY
Sbjct: 115 --IKLLQYTSQICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYY 172
Query: 289 RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
+ G P+ W APESL + F+ SDVWS+GVVL+E+ T
Sbjct: 173 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 119/220 (54%), Gaps = 13/220 (5%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNE 172
D + + L +LG G+FG V + A+K ++++E +F E
Sbjct: 3 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFERE 61
Query: 173 ASVMKAFDTHHVVKLYGVV-SEGNPTL-VIMELMGGGDLKNYLRSCRPDAETDVERSPPT 230
++K+ ++VK GV S G L +IME + G L++YL+ + +
Sbjct: 62 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH-------- 113
Query: 231 LSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI-YETEYYR 289
++LQ +++ GM YL K+++HRDLA RN +V ++ VK+GDFG+T+ + + E+++
Sbjct: 114 -IKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFK 172
Query: 290 KGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
G P+ W APESL + F+ SDVWS+GVVL+E+ T
Sbjct: 173 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 120/215 (55%), Gaps = 21/215 (9%)
Query: 122 VTILDELGNGSFGLV----YRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMK 177
+ + +LG G+FG V Y L + +L A+K + ++++ +F E ++K
Sbjct: 13 LKYISQLGKGNFGSVELCRYDPLGDNTGALV----AVKQLQHSGPDQQR-DFQREIQILK 67
Query: 178 AFDTHHVVKLYGV-VSEGNPTL-VIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRIL 235
A + +VK GV G +L ++ME + G L+++L+ R A D SR+L
Sbjct: 68 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR--ARLDA-------SRLL 118
Query: 236 QMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI-YETEYYRKGSRG 294
++++ GM YL ++ VHRDLAARN +V + VK+ DFG+ + + + +YY G
Sbjct: 119 LYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPG 178
Query: 295 FLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
P+ W APESL D +F+ SDVWS+GVVL+E+ T
Sbjct: 179 QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 120/215 (55%), Gaps = 21/215 (9%)
Query: 122 VTILDELGNGSFGLV----YRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMK 177
+ + +LG G+FG V Y L + +L A+K + ++++ +F E ++K
Sbjct: 12 LKYISQLGKGNFGSVELCRYDPLGDNTGALV----AVKQLQHSGPDQQR-DFQREIQILK 66
Query: 178 AFDTHHVVKLYGV-VSEGNPTL-VIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRIL 235
A + +VK GV G +L ++ME + G L+++L+ R A D SR+L
Sbjct: 67 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR--ARLDA-------SRLL 117
Query: 236 QMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI-YETEYYRKGSRG 294
++++ GM YL ++ VHRDLAARN +V + VK+ DFG+ + + + +YY G
Sbjct: 118 LYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPG 177
Query: 295 FLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
P+ W APESL D +F+ SDVWS+GVVL+E+ T
Sbjct: 178 QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 120/215 (55%), Gaps = 21/215 (9%)
Query: 122 VTILDELGNGSFGLV----YRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMK 177
+ + +LG G+FG V Y L + +L A+K + ++++ +F E ++K
Sbjct: 25 LKYISQLGKGNFGSVELCRYDPLGDNTGALV----AVKQLQHSGPDQQR-DFQREIQILK 79
Query: 178 AFDTHHVVKLYGV-VSEGNPTL-VIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRIL 235
A + +VK GV G +L ++ME + G L+++L+ R A D SR+L
Sbjct: 80 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR--ARLDA-------SRLL 130
Query: 236 QMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI-YETEYYRKGSRG 294
++++ GM YL ++ VHRDLAARN +V + VK+ DFG+ + + + +YY G
Sbjct: 131 LYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPG 190
Query: 295 FLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
P+ W APESL D +F+ SDVWS+GVVL+E+ T
Sbjct: 191 QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 118/221 (53%), Gaps = 13/221 (5%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLN 171
+D + + L +LG G+FG V + A+K ++++E +F
Sbjct: 2 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFER 60
Query: 172 EASVMKAFDTHHVVKLYGVV-SEGNPTL-VIMELMGGGDLKNYLRSCRPDAETDVERSPP 229
E ++K+ ++VK GV S G L +IME + G L++YL+ + +
Sbjct: 61 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH------- 113
Query: 230 TLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI-YETEYY 288
++LQ +++ GM YL K+++HRDLA RN +V ++ VK+GDFG+T+ + + E
Sbjct: 114 --IKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 171
Query: 289 RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
+ G P+ W APESL + F+ SDVWS+GVVL+E+ T
Sbjct: 172 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 118/221 (53%), Gaps = 13/221 (5%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLN 171
+D + + L +LG G+FG V + A+K ++++E +F
Sbjct: 33 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFER 91
Query: 172 EASVMKAFDTHHVVKLYGVV-SEGNPTL-VIMELMGGGDLKNYLRSCRPDAETDVERSPP 229
E ++K+ ++VK GV S G L +IME + G L++YL+ + +
Sbjct: 92 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH------- 144
Query: 230 TLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI-YETEYY 288
++LQ +++ GM YL K+++HRDLA RN +V ++ VK+GDFG+T+ + + E
Sbjct: 145 --IKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 202
Query: 289 RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
+ G P+ W APESL + F+ SDVWS+GVVL+E+ T
Sbjct: 203 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 118/221 (53%), Gaps = 13/221 (5%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLN 171
+D + + L +LG G+FG V + A+K ++++E +F
Sbjct: 1 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFER 59
Query: 172 EASVMKAFDTHHVVKLYGVV-SEGNPTL-VIMELMGGGDLKNYLRSCRPDAETDVERSPP 229
E ++K+ ++VK GV S G L +IME + G L++YL+ + +
Sbjct: 60 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH------- 112
Query: 230 TLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI-YETEYY 288
++LQ +++ GM YL K+++HRDLA RN +V ++ VK+GDFG+T+ + + E
Sbjct: 113 --IKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 170
Query: 289 RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
+ G P+ W APESL + F+ SDVWS+GVVL+E+ T
Sbjct: 171 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 118/221 (53%), Gaps = 13/221 (5%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLN 171
+D + + L +LG G+FG V + A+K ++++E +F
Sbjct: 6 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFER 64
Query: 172 EASVMKAFDTHHVVKLYGVV-SEGNPTL-VIMELMGGGDLKNYLRSCRPDAETDVERSPP 229
E ++K+ ++VK GV S G L +IME + G L++YL+ + +
Sbjct: 65 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH------- 117
Query: 230 TLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI-YETEYY 288
++LQ +++ GM YL K+++HRDLA RN +V ++ VK+GDFG+T+ + + E
Sbjct: 118 --IKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 175
Query: 289 RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
+ G P+ W APESL + F+ SDVWS+GVVL+E+ T
Sbjct: 176 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 118/221 (53%), Gaps = 13/221 (5%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLN 171
+D + + L +LG G+FG V + A+K ++++E +F
Sbjct: 5 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFER 63
Query: 172 EASVMKAFDTHHVVKLYGVV-SEGNPTL-VIMELMGGGDLKNYLRSCRPDAETDVERSPP 229
E ++K+ ++VK GV S G L +IME + G L++YL+ + +
Sbjct: 64 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH------- 116
Query: 230 TLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI-YETEYY 288
++LQ +++ GM YL K+++HRDLA RN +V ++ VK+GDFG+T+ + + E
Sbjct: 117 --IKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 174
Query: 289 RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
+ G P+ W APESL + F+ SDVWS+GVVL+E+ T
Sbjct: 175 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 118/221 (53%), Gaps = 13/221 (5%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLN 171
+D + + L +LG G+FG V + A+K ++++E +F
Sbjct: 9 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFER 67
Query: 172 EASVMKAFDTHHVVKLYGVV-SEGNPTL-VIMELMGGGDLKNYLRSCRPDAETDVERSPP 229
E ++K+ ++VK GV S G L +IME + G L++YL+ + +
Sbjct: 68 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH------- 120
Query: 230 TLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI-YETEYY 288
++LQ +++ GM YL K+++HRDLA RN +V ++ VK+GDFG+T+ + + E
Sbjct: 121 --IKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 178
Query: 289 RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
+ G P+ W APESL + F+ SDVWS+GVVL+E+ T
Sbjct: 179 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 118/221 (53%), Gaps = 13/221 (5%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLN 171
+D + + L +LG G+FG V + A+K ++++E +F
Sbjct: 7 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFER 65
Query: 172 EASVMKAFDTHHVVKLYGVV-SEGNPTL-VIMELMGGGDLKNYLRSCRPDAETDVERSPP 229
E ++K+ ++VK GV S G L +IME + G L++YL+ + +
Sbjct: 66 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH------- 118
Query: 230 TLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI-YETEYY 288
++LQ +++ GM YL K+++HRDLA RN +V ++ VK+GDFG+T+ + + E
Sbjct: 119 --IKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 176
Query: 289 RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
+ G P+ W APESL + F+ SDVWS+GVVL+E+ T
Sbjct: 177 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 118/221 (53%), Gaps = 13/221 (5%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLN 171
+D + + L +LG G+FG V + A+K ++++E +F
Sbjct: 8 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFER 66
Query: 172 EASVMKAFDTHHVVKLYGVV-SEGNPTL-VIMELMGGGDLKNYLRSCRPDAETDVERSPP 229
E ++K+ ++VK GV S G L +IME + G L++YL+ + +
Sbjct: 67 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH------- 119
Query: 230 TLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI-YETEYY 288
++LQ +++ GM YL K+++HRDLA RN +V ++ VK+GDFG+T+ + + E
Sbjct: 120 --IKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 177
Query: 289 RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
+ G P+ W APESL + F+ SDVWS+GVVL+E+ T
Sbjct: 178 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 117/220 (53%), Gaps = 13/220 (5%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNE 172
D + + L +LG G+FG V + A+K ++++E +F E
Sbjct: 3 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFERE 61
Query: 173 ASVMKAFDTHHVVKLYGVV-SEGNPTL-VIMELMGGGDLKNYLRSCRPDAETDVERSPPT 230
++K+ ++VK GV S G L +IME + G L++YL+ + +
Sbjct: 62 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH-------- 113
Query: 231 LSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI-YETEYYR 289
++LQ +++ GM YL K+++HRDLA RN +V ++ VK+GDFG+T+ + + E +
Sbjct: 114 -IKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 172
Query: 290 KGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
G P+ W APESL + F+ SDVWS+GVVL+E+ T
Sbjct: 173 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 119/221 (53%), Gaps = 13/221 (5%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLN 171
+D + + L +LG G+FG V + A+K ++++E +F
Sbjct: 5 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFER 63
Query: 172 EASVMKAFDTHHVVKLYGVV-SEGNPTL-VIMELMGGGDLKNYLRSCRPDAETDVERSPP 229
E ++K+ ++VK GV S G L +IME + G L++YL++ ER
Sbjct: 64 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQA-------HAERIDH 116
Query: 230 TLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI-YETEYY 288
++LQ +++ GM YL K+++HRDLA RN +V ++ VK+GDFG+T+ + + E
Sbjct: 117 I--KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 174
Query: 289 RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
+ G P+ W APESL + F+ SDVWS+GVVL+E+ T
Sbjct: 175 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 117/220 (53%), Gaps = 13/220 (5%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNE 172
D + + L +LG G+FG V + A+K ++++E +F E
Sbjct: 1 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFERE 59
Query: 173 ASVMKAFDTHHVVKLYGVV-SEGNPTL-VIMELMGGGDLKNYLRSCRPDAETDVERSPPT 230
++K+ ++VK GV S G L +IME + G L++YL+ + +
Sbjct: 60 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH-------- 111
Query: 231 LSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI-YETEYYR 289
++LQ +++ GM YL K+++HRDLA RN +V ++ VK+GDFG+T+ + + E +
Sbjct: 112 -IKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 170
Query: 290 KGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
G P+ W APESL + F+ SDVWS+GVVL+E+ T
Sbjct: 171 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 117/221 (52%), Gaps = 13/221 (5%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLN 171
+D + + L +LG G+FG V + A+K ++++E +F
Sbjct: 5 RDPTQFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFER 63
Query: 172 EASVMKAFDTHHVVKLYGVV-SEGNPTL-VIMELMGGGDLKNYLRSCRPDAETDVERSPP 229
E ++K+ ++VK GV S G L +IME + G L+ YL+ + +
Sbjct: 64 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDH------- 116
Query: 230 TLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI-YETEYY 288
++LQ +++ GM YL K+++HRDLA RN +V ++ VK+GDFG+T+ + + E
Sbjct: 117 --IKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 174
Query: 289 RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
+ G P+ W APESL + F+ SDVWS+GVVL+E+ T
Sbjct: 175 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 115/211 (54%), Gaps = 13/211 (6%)
Query: 122 VTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDT 181
+ L +LG G+FG V + A+K ++++E +F E ++K+
Sbjct: 30 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQH 88
Query: 182 HHVVKLYGVV-SEGNPTL-VIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAA 239
++VK GV S G L +IME + G L++YL+ + + ++LQ +
Sbjct: 89 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH---------IKLLQYTS 139
Query: 240 EVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI-YETEYYRKGSRGFLPV 298
++ GM YL K+++HRDLA RN +V ++ VK+GDFG+T+ + + E + G P+
Sbjct: 140 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 199
Query: 299 RWMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
W APESL + F+ SDVWS+GVVL+E+ T
Sbjct: 200 FWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 115/211 (54%), Gaps = 13/211 (6%)
Query: 122 VTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDT 181
+ L +LG G+FG V + A+K ++++E +F E ++K+
Sbjct: 30 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQH 88
Query: 182 HHVVKLYGVV-SEGNPTL-VIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAA 239
++VK GV S G L +IME + G L++YL+ + + ++LQ +
Sbjct: 89 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH---------IKLLQYTS 139
Query: 240 EVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI-YETEYYRKGSRGFLPV 298
++ GM YL K+++HRDLA RN +V ++ VK+GDFG+T+ + + E + G P+
Sbjct: 140 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 199
Query: 299 RWMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
W APESL + F+ SDVWS+GVVL+E+ T
Sbjct: 200 FWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 109/208 (52%), Gaps = 14/208 (6%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHV 184
+ +LG G FG V A+K + + ++ + E +++ H+
Sbjct: 19 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 185 VKLYGVVS-EGNPTL-VIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVA 242
+K G +G +L ++ME + G L++YL R L+++L A ++
Sbjct: 79 IKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL-----------PRHSIGLAQLLLFAQQIC 127
Query: 243 DGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYE-TEYYRKGSRGFLPVRWM 301
+GMAYL + ++HR+LAARN ++ +D VK+GDFG+ + + E EYYR G PV W
Sbjct: 128 EGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY 187
Query: 302 APESLKDGVFTSHSDVWSYGVVLWEMAT 329
APE LK+ F SDVWS+GV L+E+ T
Sbjct: 188 APECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 109/208 (52%), Gaps = 14/208 (6%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHV 184
+ +LG G FG V A+K + + ++ + E +++ H+
Sbjct: 19 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 185 VKLYGVVS-EGNPTL-VIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVA 242
+K G +G +L ++ME + G L++YL R L+++L A ++
Sbjct: 79 IKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL-----------PRHSIGLAQLLLFAQQIC 127
Query: 243 DGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYE-TEYYRKGSRGFLPVRWM 301
+GMAYL + ++HR+LAARN ++ +D VK+GDFG+ + + E EYYR G PV W
Sbjct: 128 EGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY 187
Query: 302 APESLKDGVFTSHSDVWSYGVVLWEMAT 329
APE LK+ F SDVWS+GV L+E+ T
Sbjct: 188 APECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 117/212 (55%), Gaps = 21/212 (9%)
Query: 125 LDELGNGSFGLV----YRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFD 180
+ +LG G+FG V Y L + +L A+K + ++++ +F E ++KA
Sbjct: 12 ISQLGKGNFGSVELCRYDPLGDNTGALV----AVKQLQHSGPDQQR-DFQREIQILKALH 66
Query: 181 THHVVKLYGV-VSEGNPTL-VIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMA 238
+ +VK GV G P L ++ME + G L+++L+ R A D SR+L +
Sbjct: 67 SDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHR--ARLDA-------SRLLLYS 117
Query: 239 AEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI-YETEYYRKGSRGFLP 297
+++ GM YL ++ VHRDLAARN +V + VK+ DFG+ + + + + G P
Sbjct: 118 SQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSP 177
Query: 298 VRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
+ W APESL D +F+ SDVWS+GVVL+E+ T
Sbjct: 178 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 109/208 (52%), Gaps = 14/208 (6%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHV 184
+ +LG G FG V A+K +A + ++ + E +++ H+
Sbjct: 36 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHI 95
Query: 185 VKLYGVVSE-GNPTL-VIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVA 242
+K G + G +L ++ME + G L++YL R L+++L A ++
Sbjct: 96 IKYKGCCEDAGAASLQLVMEYVPLGSLRDYL-----------PRHSIGLAQLLLFAQQIC 144
Query: 243 DGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYE-TEYYRKGSRGFLPVRWM 301
+GMAYL + ++HRDLAARN ++ +D VK+GDFG+ + + E E YR G PV W
Sbjct: 145 EGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWY 204
Query: 302 APESLKDGVFTSHSDVWSYGVVLWEMAT 329
APE LK+ F SDVWS+GV L+E+ T
Sbjct: 205 APECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 105/208 (50%), Gaps = 14/208 (6%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHV 184
+ +LG G FG V A+K E + ++ + E +++ H+
Sbjct: 14 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 73
Query: 185 VKLYGVVSEGNPTLV--IMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVA 242
VK G + V +ME + G L++YL R L+++L A ++
Sbjct: 74 VKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-----------PRHCVGLAQLLLFAQQIC 122
Query: 243 DGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYE-TEYYRKGSRGFLPVRWM 301
+GMAYL + ++HR LAARN ++ +D VK+GDFG+ + + E EYYR G PV W
Sbjct: 123 EGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY 182
Query: 302 APESLKDGVFTSHSDVWSYGVVLWEMAT 329
APE LK+ F SDVWS+GV L+E+ T
Sbjct: 183 APECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 105/208 (50%), Gaps = 14/208 (6%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHV 184
+ +LG G FG V A+K E + ++ + E +++ H+
Sbjct: 13 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 72
Query: 185 VKLYGVVSEGNPTLV--IMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVA 242
VK G + V +ME + G L++YL R L+++L A ++
Sbjct: 73 VKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-----------PRHCVGLAQLLLFAQQIC 121
Query: 243 DGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYE-TEYYRKGSRGFLPVRWM 301
+GMAYL + ++HR LAARN ++ +D VK+GDFG+ + + E EYYR G PV W
Sbjct: 122 EGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY 181
Query: 302 APESLKDGVFTSHSDVWSYGVVLWEMAT 329
APE LK+ F SDVWS+GV L+E+ T
Sbjct: 182 APECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 113/220 (51%), Gaps = 12/220 (5%)
Query: 125 LDELGNGSFGLVYRGL-IKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHH 183
L LG+G FG V++G+ I + S+ + P IKV + + + + + + D H
Sbjct: 18 LKVLGSGVFGTVHKGVWIPEGESI-KIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAH 76
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
+V+L G+ G+ ++ + + G L +++R R + +L ++A
Sbjct: 77 IVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQL---------LLNWGVQIAK 126
Query: 244 GMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAP 303
GM YL + VHR+LAARN ++ V+V DFG+ + + S P++WMA
Sbjct: 127 GMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMAL 186
Query: 304 ESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
ES+ G +T SDVWSYGV +WE+ T ++PY GL +V
Sbjct: 187 ESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEV 226
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 113/220 (51%), Gaps = 12/220 (5%)
Query: 125 LDELGNGSFGLVYRGL-IKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHH 183
L LG+G FG V++G+ I + S+ + P IKV + + + + + + D H
Sbjct: 36 LKVLGSGVFGTVHKGVWIPEGESI-KIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAH 94
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
+V+L G+ G+ ++ + + G L +++R R + +L ++A
Sbjct: 95 IVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQL---------LLNWGVQIAK 144
Query: 244 GMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAP 303
GM YL + VHR+LAARN ++ V+V DFG+ + + S P++WMA
Sbjct: 145 GMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMAL 204
Query: 304 ESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
ES+ G +T SDVWSYGV +WE+ T ++PY GL +V
Sbjct: 205 ESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEV 244
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/235 (34%), Positives = 117/235 (49%), Gaps = 19/235 (8%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA-EFLN 171
D ++ + I +++G GSFG V+R A+K+ E E+ EFL
Sbjct: 30 DDMDIPWCDLNIKEKIGAGSFGTVHRA------EWHGSDVAVKILMEQDFHAERVNEFLR 83
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
E ++MK ++V G V++ ++ E + G L L + D ER
Sbjct: 84 EVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLD-ER----- 137
Query: 232 SRILQMAAEVADGMAYLADKK--FVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYR 289
R L MA +VA GM YL ++ VHR+L + N +V TVKV DFG++R T
Sbjct: 138 -RRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSS 196
Query: 290 KGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVL 344
K + G WMAPE L+D SDV+S+GV+LWE+ATL QP+ L+ QV+
Sbjct: 197 KSAAGT--PEWMAPEVLRDEPSNEKSDVYSFGVILWELATL-QQPWGNLNPAQVV 248
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/235 (33%), Positives = 114/235 (48%), Gaps = 19/235 (8%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA-EFLN 171
D ++ + I +++G GSFG V+R A+K+ E E+ EFL
Sbjct: 30 DDMDIPWCDLNIKEKIGAGSFGTVHRA------EWHGSDVAVKILMEQDFHAERVNEFLR 83
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
E ++MK ++V G V++ ++ E + G L L + D R
Sbjct: 84 EVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRR---- 139
Query: 232 SRILQMAAEVADGMAYLADKK--FVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYR 289
L MA +VA GM YL ++ VHRDL + N +V TVKV DFG++R
Sbjct: 140 ---LSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXS 196
Query: 290 KGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVL 344
K + G WMAPE L+D SDV+S+GV+LWE+ATL QP+ L+ QV+
Sbjct: 197 KXAAGT--PEWMAPEVLRDEPSNEKSDVYSFGVILWELATL-QQPWGNLNPAQVV 248
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 99/206 (48%), Gaps = 12/206 (5%)
Query: 127 ELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVK 186
+LG G FG V A+K + A+ E +++ ++VK
Sbjct: 16 DLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVK 75
Query: 187 LYGVVSE--GNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADG 244
G+ +E GN +IME + G LK YL P + + L + L+ A ++ G
Sbjct: 76 YKGICTEDGGNGIKLIMEFLPSGSLKEYL----PKNKNKI-----NLKQQLKYAVQICKG 126
Query: 245 MAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI-YETEYYRKGSRGFLPVRWMAP 303
M YL +++VHRDLAARN +V + VK+GDFG+T+ I + E PV W AP
Sbjct: 127 MDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAP 186
Query: 304 ESLKDGVFTSHSDVWSYGVVLWEMAT 329
E L F SDVWS+GV L E+ T
Sbjct: 187 ECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 99/206 (48%), Gaps = 12/206 (5%)
Query: 127 ELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVK 186
+LG G FG V A+K + A+ E +++ ++VK
Sbjct: 28 DLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVK 87
Query: 187 LYGVVSE--GNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADG 244
G+ +E GN +IME + G LK YL P + + L + L+ A ++ G
Sbjct: 88 YKGICTEDGGNGIKLIMEFLPSGSLKEYL----PKNKNKI-----NLKQQLKYAVQICKG 138
Query: 245 MAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI-YETEYYRKGSRGFLPVRWMAP 303
M YL +++VHRDLAARN +V + VK+GDFG+T+ I + E PV W AP
Sbjct: 139 MDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAP 198
Query: 304 ESLKDGVFTSHSDVWSYGVVLWEMAT 329
E L F SDVWS+GV L E+ T
Sbjct: 199 ECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 123 TILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTH 182
T L+ +G GSFG V++G+ D R+ + AIK+ + +E E + E +V+ D+
Sbjct: 26 TKLERIGKGSFGEVFKGI--DNRT--QQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSS 81
Query: 183 HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVA 242
+V K YG +G+ +IME +GGG + LR+ P +I M E+
Sbjct: 82 YVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRA-----------GPFDEFQIATMLKEIL 130
Query: 243 DGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMA 302
G+ YL +K +HRD+ A N ++++ VK+ DFG+ + +T+ R G P WMA
Sbjct: 131 KGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVG-TPF-WMA 188
Query: 303 PESLKDGVFTSHSDVWSYGVVLWEMA 328
PE ++ + S +D+WS G+ E+A
Sbjct: 189 PEVIQQSAYDSKADIWSLGITAIELA 214
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 125/248 (50%), Gaps = 34/248 (13%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAE-FLN 171
D WE+ ++T+ +G+GSFG VY+G A+K+ N A ++ + F N
Sbjct: 21 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-------DVAVKMLNVTAPTPQQLQAFKN 73
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTL-VIMELMGGGDLKNYLRSCRPDAETDVERSPPT 230
E V++ T HV L + P L ++ + G L ++L ET E
Sbjct: 74 EVGVLRK--TRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHII----ETKFE----- 122
Query: 231 LSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYR- 289
+ +++ +A + A GM YL K +HRDL + N + +DLTVK+GDFG+ TE R
Sbjct: 123 MIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-----TEKSRW 177
Query: 290 KGSRGFL----PVRWMAPESLK---DGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQ 342
GS F + WMAPE ++ ++ SDV+++G+VL+E+ T PY ++N
Sbjct: 178 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRD 236
Query: 343 VLNWVKGK 350
+ ++ G+
Sbjct: 237 QIIFMVGR 244
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 125/248 (50%), Gaps = 34/248 (13%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAE-FLN 171
D WE+ ++T+ +G+GSFG VY+G A+K+ N A ++ + F N
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-------DVAVKMLNVTAPTPQQLQAFKN 53
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIM-ELMGGGDLKNYLRSCRPDAETDVERSPPT 230
E V++ T HV L + P L I+ + G L ++L ET E
Sbjct: 54 EVGVLRK--TRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHII----ETKFE----- 102
Query: 231 LSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYR- 289
+ +++ +A + A GM YL K +HRDL + N + +DLTVK+GDFG+ TE R
Sbjct: 103 MIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-----TEKSRW 157
Query: 290 KGSRGFL----PVRWMAPESLK---DGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQ 342
GS F + WMAPE ++ ++ SDV+++G+VL+E+ T PY ++N
Sbjct: 158 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRD 216
Query: 343 VLNWVKGK 350
+ ++ G+
Sbjct: 217 QIIFMVGR 224
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 125/248 (50%), Gaps = 34/248 (13%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAE-FLN 171
D WE+ ++T+ +G+GSFG VY+G A+K+ N A ++ + F N
Sbjct: 29 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-------DVAVKMLNVTAPTPQQLQAFKN 81
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTL-VIMELMGGGDLKNYLRSCRPDAETDVERSPPT 230
E V++ T HV L + P L ++ + G L ++L ET E
Sbjct: 82 EVGVLRK--TRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHII----ETKFE----- 130
Query: 231 LSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYR- 289
+ +++ +A + A GM YL K +HRDL + N + +DLTVK+GDFG+ TE R
Sbjct: 131 MIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-----TEKSRW 185
Query: 290 KGSRGFL----PVRWMAPESLK---DGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQ 342
GS F + WMAPE ++ ++ SDV+++G+VL+E+ T PY ++N
Sbjct: 186 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRD 244
Query: 343 VLNWVKGK 350
+ ++ G+
Sbjct: 245 QIIFMVGR 252
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 126/250 (50%), Gaps = 34/250 (13%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAE-FLN 171
D WE+ ++T+ +G+GSFG VY+G A+K+ N A ++ + F N
Sbjct: 17 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-------DVAVKMLNVTAPTPQQLQAFKN 69
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTL-VIMELMGGGDLKNYLRSCRPDAETDVERSPPT 230
E V++ T HV L + P L ++ + G L ++L + +ET E
Sbjct: 70 EVGVLRK--TRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHA----SETKFE----- 118
Query: 231 LSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYR- 289
+ +++ +A + A GM YL K +HRDL + N + +D TVK+GDFG+ TE R
Sbjct: 119 MKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLA-----TEKSRW 173
Query: 290 KGSRGFL----PVRWMAPESLK---DGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQ 342
GS F + WMAPE ++ ++ SDV+++G+VL+E+ T PY ++N
Sbjct: 174 SGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRD 232
Query: 343 VLNWVKGKSS 352
+ + G+ S
Sbjct: 233 QIIEMVGRGS 242
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 123/247 (49%), Gaps = 32/247 (12%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAE-FLN 171
D WE+ ++T+ +G+GSFG VY+G A+K+ N A ++ + F N
Sbjct: 3 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-------DVAVKMLNVTAPTPQQLQAFKN 55
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTL-VIMELMGGGDLKNYLRSCRPDAETDVERSPPT 230
E V++ T HV L + P L ++ + G L ++L ET E
Sbjct: 56 EVGVLRK--TRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHII----ETKFE----- 104
Query: 231 LSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRK 290
+ +++ +A + A GM YL K +HRDL + N + +DLTVK+GDFG+ +
Sbjct: 105 MIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA----TVKSRWS 160
Query: 291 GSRGFL----PVRWMAPESLK---DGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
GS F + WMAPE ++ ++ SDV+++G+VL+E+ T PY ++N
Sbjct: 161 GSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQ 219
Query: 344 LNWVKGK 350
+ ++ G+
Sbjct: 220 IIFMVGR 226
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 123/247 (49%), Gaps = 32/247 (12%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAE-FLN 171
D WE+ ++T+ +G+GSFG VY+G A+K+ N A ++ + F N
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-------DVAVKMLNVTAPTPQQLQAFKN 53
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIM-ELMGGGDLKNYLRSCRPDAETDVERSPPT 230
E V++ T HV L + P L I+ + G L ++L ET E
Sbjct: 54 EVGVLRK--TRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHII----ETKFE----- 102
Query: 231 LSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRK 290
+ +++ +A + A GM YL K +HRDL + N + +DLTVK+GDFG+ +
Sbjct: 103 MIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA----TVKSRWS 158
Query: 291 GSRGFL----PVRWMAPESLK---DGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
GS F + WMAPE ++ ++ SDV+++G+VL+E+ T PY ++N
Sbjct: 159 GSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQ 217
Query: 344 LNWVKGK 350
+ ++ G+
Sbjct: 218 IIFMVGR 224
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 123/247 (49%), Gaps = 32/247 (12%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAE-FLN 171
D WE+ ++T+ +G+GSFG VY+G A+K+ N A ++ + F N
Sbjct: 6 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-------DVAVKMLNVTAPTPQQLQAFKN 58
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIM-ELMGGGDLKNYLRSCRPDAETDVERSPPT 230
E V++ T HV L + P L I+ + G L ++L ET E
Sbjct: 59 EVGVLRK--TRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHII----ETKFE----- 107
Query: 231 LSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRK 290
+ +++ +A + A GM YL K +HRDL + N + +DLTVK+GDFG+ +
Sbjct: 108 MIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA----TVKSRWS 163
Query: 291 GSRGFL----PVRWMAPESLK---DGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
GS F + WMAPE ++ ++ SDV+++G+VL+E+ T PY ++N
Sbjct: 164 GSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQ 222
Query: 344 LNWVKGK 350
+ ++ G+
Sbjct: 223 IIFMVGR 229
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 123/247 (49%), Gaps = 32/247 (12%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAE-FLN 171
D WE+ ++T+ +G+GSFG VY+G A+K+ N A ++ + F N
Sbjct: 6 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-------DVAVKMLNVTAPTPQQLQAFKN 58
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIM-ELMGGGDLKNYLRSCRPDAETDVERSPPT 230
E V++ T HV L + P L I+ + G L ++L ET E
Sbjct: 59 EVGVLRK--TRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHII----ETKFE----- 107
Query: 231 LSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRK 290
+ +++ +A + A GM YL K +HRDL + N + +DLTVK+GDFG+ +
Sbjct: 108 MIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA----TVKSRWS 163
Query: 291 GSRGFL----PVRWMAPESLK---DGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
GS F + WMAPE ++ ++ SDV+++G+VL+E+ T PY ++N
Sbjct: 164 GSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQ 222
Query: 344 LNWVKGK 350
+ ++ G+
Sbjct: 223 IIFMVGR 229
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 126/250 (50%), Gaps = 34/250 (13%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAE-FLN 171
D WE+ ++T+ +G+GSFG VY+G A+K+ N A ++ + F N
Sbjct: 17 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-------DVAVKMLNVTAPTPQQLQAFKN 69
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTL-VIMELMGGGDLKNYLRSCRPDAETDVERSPPT 230
E V++ T HV L + P L ++ + G L ++L + +ET E
Sbjct: 70 EVGVLRK--TRHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHA----SETKFE----- 118
Query: 231 LSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYR- 289
+ +++ +A + A GM YL K +HRDL + N + +D TVK+GDFG+ TE R
Sbjct: 119 MKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLA-----TEKSRW 173
Query: 290 KGSRGFL----PVRWMAPESLK---DGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQ 342
GS F + WMAPE ++ ++ SDV+++G+VL+E+ T PY ++N
Sbjct: 174 SGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRD 232
Query: 343 VLNWVKGKSS 352
+ + G+ S
Sbjct: 233 QIIEMVGRGS 242
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 123/247 (49%), Gaps = 32/247 (12%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAE-FLN 171
D WE+ ++T+ +G+GSFG VY+G A+K+ N A ++ + F N
Sbjct: 28 DDWEIPDGQITVGQRIGSGSFGTVYKGK-------WHGDVAVKMLNVTAPTPQQLQAFKN 80
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTL-VIMELMGGGDLKNYLRSCRPDAETDVERSPPT 230
E V++ T HV L + P L ++ + G L ++L ET E
Sbjct: 81 EVGVLRK--TRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHII----ETKFE----- 129
Query: 231 LSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRK 290
+ +++ +A + A GM YL K +HRDL + N + +DLTVK+GDFG+ +
Sbjct: 130 MIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA----TVKSRWS 185
Query: 291 GSRGFL----PVRWMAPESLK---DGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
GS F + WMAPE ++ ++ SDV+++G+VL+E+ T PY ++N
Sbjct: 186 GSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQ 244
Query: 344 LNWVKGK 350
+ ++ G+
Sbjct: 245 IIFMVGR 251
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 119/238 (50%), Gaps = 25/238 (10%)
Query: 123 TILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTH 182
T L+++G GSFG V++G+ D R+ + AIK+ + +E E + E +V+ D+
Sbjct: 30 TKLEKIGKGSFGEVFKGI--DNRT--QKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 85
Query: 183 HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVA 242
+V K YG + +IME +GGG + L E P ++I + E+
Sbjct: 86 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-----------EPGPLDETQIATILREIL 134
Query: 243 DGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMA 302
G+ YL +K +HRD+ A N ++++ VK+ DFG+ + +T+ R G P WMA
Sbjct: 135 KGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVG-TPF-WMA 192
Query: 303 PESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSNEYKVNPP 360
PE +K + S +D+WS G+ E+A P+ L +VL + K NPP
Sbjct: 193 PEVIKQSAYDSKADIWSLGITAIELAR-GEPPHSELHPMKVLFLIP-------KNNPP 242
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 123/247 (49%), Gaps = 32/247 (12%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAE-FLN 171
D WE+ ++T+ +G+GSFG VY+G A+K+ N A ++ + F N
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-------DVAVKMLNVTAPTPQQLQAFKN 53
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTL-VIMELMGGGDLKNYLRSCRPDAETDVERSPPT 230
E V++ T HV L + P L ++ + G L ++L ET E
Sbjct: 54 EVGVLRK--TRHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHII----ETKFE----- 102
Query: 231 LSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRK 290
+ +++ +A + A GM YL K +HRDL + N + +DLTVK+GDFG+ +
Sbjct: 103 MIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA----TVKSRWS 158
Query: 291 GSRGFL----PVRWMAPESLK---DGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
GS F + WMAPE ++ ++ SDV+++G+VL+E+ T PY ++N
Sbjct: 159 GSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQ 217
Query: 344 LNWVKGK 350
+ ++ G+
Sbjct: 218 IIFMVGR 224
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 123/247 (49%), Gaps = 32/247 (12%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAE-FLN 171
D WE+ ++T+ +G+GSFG VY+G A+K+ N A ++ + F N
Sbjct: 29 DDWEIPDGQITVGQRIGSGSFGTVYKGK-------WHGDVAVKMLNVTAPTPQQLQAFKN 81
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIM-ELMGGGDLKNYLRSCRPDAETDVERSPPT 230
E V++ T HV L + P L I+ + G L ++L ET E
Sbjct: 82 EVGVLRK--TRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHII----ETKFE----- 130
Query: 231 LSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRK 290
+ +++ +A + A GM YL K +HRDL + N + +DLTVK+GDFG+ +
Sbjct: 131 MIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA----TVKSRWS 186
Query: 291 GSRGFL----PVRWMAPESLK---DGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
GS F + WMAPE ++ ++ SDV+++G+VL+E+ T PY ++N
Sbjct: 187 GSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQ 245
Query: 344 LNWVKGK 350
+ ++ G+
Sbjct: 246 IIFMVGR 252
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 119/238 (50%), Gaps = 25/238 (10%)
Query: 123 TILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTH 182
T L+++G GSFG V++G+ D R+ + AIK+ + +E E + E +V+ D+
Sbjct: 10 TKLEKIGKGSFGEVFKGI--DNRT--QKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 65
Query: 183 HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVA 242
+V K YG + +IME +GGG + L E P ++I + E+
Sbjct: 66 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-----------EPGPLDETQIATILREIL 114
Query: 243 DGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMA 302
G+ YL +K +HRD+ A N ++++ VK+ DFG+ + +T+ R G P WMA
Sbjct: 115 KGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVG-TPF-WMA 172
Query: 303 PESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSNEYKVNPP 360
PE +K + S +D+WS G+ E+A P+ L +VL + K NPP
Sbjct: 173 PEVIKQSAYDSKADIWSLGITAIELAR-GEPPHSELHPMKVLFLIP-------KNNPP 222
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 119/238 (50%), Gaps = 25/238 (10%)
Query: 123 TILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTH 182
T L+++G GSFG V++G+ D R+ + AIK+ + +E E + E +V+ D+
Sbjct: 10 TKLEKIGKGSFGEVFKGI--DNRT--QKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 65
Query: 183 HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVA 242
+V K YG + +IME +GGG + L E P ++I + E+
Sbjct: 66 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-----------EPGPLDETQIATILREIL 114
Query: 243 DGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMA 302
G+ YL +K +HRD+ A N ++++ VK+ DFG+ + +T+ R G P WMA
Sbjct: 115 KGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVG-TPF-WMA 172
Query: 303 PESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSNEYKVNPP 360
PE +K + S +D+WS G+ E+A P+ L +VL + K NPP
Sbjct: 173 PEVIKQSAYDSKADIWSLGITAIELAR-GEPPHSELHPMKVLFLIP-------KNNPP 222
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 119/238 (50%), Gaps = 25/238 (10%)
Query: 123 TILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTH 182
T L+++G GSFG V++G+ D R+ + AIK+ + +E E + E +V+ D+
Sbjct: 25 TKLEKIGKGSFGEVFKGI--DNRT--QKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 80
Query: 183 HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVA 242
+V K YG + +IME +GGG + L E P ++I + E+
Sbjct: 81 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-----------EPGPLDETQIATILREIL 129
Query: 243 DGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMA 302
G+ YL +K +HRD+ A N ++++ VK+ DFG+ + +T+ R G P WMA
Sbjct: 130 KGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVG-TPF-WMA 187
Query: 303 PESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSNEYKVNPP 360
PE +K + S +D+WS G+ E+A P+ L +VL + K NPP
Sbjct: 188 PEVIKQSAYDSKADIWSLGITAIELAR-GEPPHSELHPMKVLFLIP-------KNNPP 237
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 124/249 (49%), Gaps = 32/249 (12%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAE-FLN 171
D WE+ ++T+ +G+GSFG VY+G A+K+ N A ++ + F N
Sbjct: 5 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-------DVAVKMLNVTAPTPQQLQAFKN 57
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIM-ELMGGGDLKNYLRSCRPDAETDVERSPPT 230
E V++ T HV L + P L I+ + G L ++L + +ET E
Sbjct: 58 EVGVLRK--TRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHA----SETKFE----- 106
Query: 231 LSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRK 290
+ +++ +A + A GM YL K +HRDL + N + +D TVK+GDFG+ +
Sbjct: 107 MKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLA----TVKSRWS 162
Query: 291 GSRGFL----PVRWMAPESLK---DGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
GS F + WMAPE ++ ++ SDV+++G+VL+E+ T PY ++N
Sbjct: 163 GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQ 221
Query: 344 LNWVKGKSS 352
+ + G+ S
Sbjct: 222 IIEMVGRGS 230
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 120/240 (50%), Gaps = 22/240 (9%)
Query: 115 WEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANE-NASEREKAEFLNEA 173
WE+ S+V + +G+GSFG VY+G A+K+ + + + F NE
Sbjct: 31 WEIEASEVMLSTRIGSGSFGTVYKGKWHG-------DVAVKILKVVDPTPEQFQAFRNEV 83
Query: 174 SVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSR 233
+V++ +++ G +++ N +V + G L +L V+ + + +
Sbjct: 84 AVLRKTRHVNILLFMGYMTKDNLAIVT-QWCEGSSLYKHLH---------VQETKFQMFQ 133
Query: 234 ILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSR 293
++ +A + A GM YL K +HRD+ + N + + LTVK+GDFG+ ++ +
Sbjct: 134 LIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQ 193
Query: 294 GFLPVRWMAPESLK---DGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGK 350
V WMAPE ++ + F+ SDV+SYG+VL+E+ T PY ++N + ++ G+
Sbjct: 194 PTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMT-GELPYSHINNRDQIIFMVGR 252
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 118/241 (48%), Gaps = 29/241 (12%)
Query: 109 LYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAE 168
L +D WE I+ ELG+G+FG VY+ K+ LA A KV + SE E +
Sbjct: 33 LNPEDFWE-------IIGELGDGAFGKVYKAQNKETSVLA----AAKVID-TKSEEELED 80
Query: 169 FLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSP 228
++ E ++ + D ++VKL N +++E GG + + ++ER P
Sbjct: 81 YMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM--------LELER-P 131
Query: 229 PTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY 288
T S+I + + D + YL D K +HRDL A N + D +K+ DFG++ T
Sbjct: 132 LTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT-IQ 190
Query: 289 RKGSRGFLPVRWMAPESL-----KDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
R+ S P WMAPE + KD + +DVWS G+ L EMA + P+ L+ +V
Sbjct: 191 RRDSFIGTPY-WMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEI-EPPHHELNPMRV 248
Query: 344 L 344
L
Sbjct: 249 L 249
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 103/206 (50%), Gaps = 17/206 (8%)
Query: 123 TILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTH 182
T LD +G GSFG VY+G+ + + AIK+ + +E E + E +V+ D+
Sbjct: 22 TKLDRIGKGSFGEVYKGIDNHTKEV----VAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 77
Query: 183 HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVA 242
++ + +G + +IME +GGG + L+ P + I + E+
Sbjct: 78 YITRYFGSYLKSTKLWIIMEYLGGGSALDLLKP-----------GPLEETYIATILREIL 126
Query: 243 DGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMA 302
G+ YL ++ +HRD+ A N ++++ VK+ DFG+ + +T+ R G P WMA
Sbjct: 127 KGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVG-TPF-WMA 184
Query: 303 PESLKDGVFTSHSDVWSYGVVLWEMA 328
PE +K + +D+WS G+ E+A
Sbjct: 185 PEVIKQSAYDFKADIWSLGITAIELA 210
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 119/245 (48%), Gaps = 37/245 (15%)
Query: 109 LYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAE 168
L +D WE I+ ELG+G+FG VY+ K+ LA A KV + SE E +
Sbjct: 33 LNPEDFWE-------IIGELGDGAFGKVYKAQNKETSVLA----AAKVID-TKSEEELED 80
Query: 169 FLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSP 228
++ E ++ + D ++VKL N +++E GG + + ++ER P
Sbjct: 81 YMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM--------LELER-P 131
Query: 229 PTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGM----TRDIYE 284
T S+I + + D + YL D K +HRDL A N + D +K+ DFG+ TR I
Sbjct: 132 LTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXI-- 189
Query: 285 TEYYRKGSRGFLPVRWMAPESL-----KDGVFTSHSDVWSYGVVLWEMATLASQPYQGLS 339
R+ S P WMAPE + KD + +DVWS G+ L EMA + P+ L+
Sbjct: 190 ---QRRDSFIGTPY-WMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEI-EPPHHELN 244
Query: 340 NEQVL 344
+VL
Sbjct: 245 PMRVL 249
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 116/241 (48%), Gaps = 29/241 (12%)
Query: 109 LYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAE 168
L +D WE I+ ELG+G+FG VY+ K+ LA A KV + SE E +
Sbjct: 33 LNPEDFWE-------IIGELGDGAFGKVYKAQNKETSVLA----AAKVID-TKSEEELED 80
Query: 169 FLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSP 228
++ E ++ + D ++VKL N +++E GG + + ++ER P
Sbjct: 81 YMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM--------LELER-P 131
Query: 229 PTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY 288
T S+I + + D + YL D K +HRDL A N + D +K+ DFG++ T
Sbjct: 132 LTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAK--NTRXI 189
Query: 289 RKGSRGFLPVRWMAPESL-----KDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
++ WMAPE + KD + +DVWS G+ L EMA + P+ L+ +V
Sbjct: 190 QRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEI-EPPHHELNPMRV 248
Query: 344 L 344
L
Sbjct: 249 L 249
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 113/243 (46%), Gaps = 38/243 (15%)
Query: 116 EVLRSKVTILDELGNGSFGLVYRGL-IKDFRSLAEHPCAIKVANENASEREKAEFLN--- 171
E+ +++T+ + +G G FG VYR I D A+K A + E N
Sbjct: 3 EIDFAELTLEEIIGIGGFGKVYRAFWIGD-------EVAVKAARHDPDEDISQTIENVRQ 55
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
EA + +++ L GV + ++ME GG L L +R PP +
Sbjct: 56 EAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSG---------KRIPPDI 106
Query: 232 SRILQMAAEVADGMAYLADKKFV---HRDLAARNCMVAD-----DLT---VKVGDFGMTR 280
++ A ++A GM YL D+ V HRDL + N ++ DL+ +K+ DFG+ R
Sbjct: 107 --LVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR 164
Query: 281 DIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSN 340
+ + T WMAPE ++ +F+ SDVWSYGV+LWE+ T P++G+
Sbjct: 165 EWHRTTKMSAAGA----YAWMAPEVIRASMFSKGSDVWSYGVLLWELLT-GEVPFRGIDG 219
Query: 341 EQV 343
V
Sbjct: 220 LAV 222
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 116/241 (48%), Gaps = 30/241 (12%)
Query: 109 LYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAE 168
L +D WE I+ ELG+ FG VY+ K+ LA A KV + SE E +
Sbjct: 8 LNPEDFWE-------IIGELGD--FGKVYKAQNKETSVLA----AAKVID-TKSEEELED 53
Query: 169 FLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSP 228
++ E ++ + D ++VKL N +++E GG + + ++ER P
Sbjct: 54 YMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM--------LELER-P 104
Query: 229 PTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY 288
T S+I + + D + YL D K +HRDL A N + D +K+ DFG++ T
Sbjct: 105 LTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQ 164
Query: 289 RKGSRGFLPVRWMAPESL-----KDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
R+ S P WMAPE + KD + +DVWS G+ L EMA + P+ L+ +V
Sbjct: 165 RRDSFIGTPY-WMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEI-EPPHHELNPMRV 222
Query: 344 L 344
L
Sbjct: 223 L 223
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 116/236 (49%), Gaps = 24/236 (10%)
Query: 100 QLMGGDDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANE 159
QL D+D L K+ EV +L++LG GS+G VY+ + K+ + AIK +
Sbjct: 14 QLKKLDEDSLTKQPE-EVF----DVLEKLGEGSYGSVYKAIHKETGQI----VAIK---Q 61
Query: 160 NASEREKAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPD 219
E + E + E S+M+ D+ HVVK YG + ++ME G G + + +R R
Sbjct: 62 VPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIR-LRNK 120
Query: 220 AETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMT 279
T+ E ++ ILQ + G+ YL + +HRD+ A N ++ + K+ DFG+
Sbjct: 121 TLTEDE-----IATILQSTLK---GLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVA 172
Query: 280 RDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPY 335
+ + R G P WMAPE +++ + +D+WS G+ EMA PY
Sbjct: 173 GQLTDXMAKRNXVIG-TPF-WMAPEVIQEIGYNCVADIWSLGITAIEMAE-GKPPY 225
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 107/205 (52%), Gaps = 13/205 (6%)
Query: 126 DELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVV 185
+++G G FG+VY+G + + ++A A V + +E K +F E VM ++V
Sbjct: 37 NKMGEGGFGVVYKGYVNN-TTVAVKKLAAMV--DITTEELKQQFDQEIKVMAKCQHENLV 93
Query: 186 KLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRI-LQMAAEVADG 244
+L G S+G+ ++ M G L + L SC ++ +PP + ++A A+G
Sbjct: 94 ELLGFSSDGDDLCLVYVYMPNGSLLDRL-SC-------LDGTPPLSWHMRCKIAQGAANG 145
Query: 245 MAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPE 304
+ +L + +HRD+ + N ++ + T K+ DFG+ R + SR +MAPE
Sbjct: 146 INFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPE 205
Query: 305 SLKDGVFTSHSDVWSYGVVLWEMAT 329
+L+ G T SD++S+GVVL E+ T
Sbjct: 206 ALR-GEITPKSDIYSFGVVLLEIIT 229
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 112/226 (49%), Gaps = 22/226 (9%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHH 183
I+ ELG+G+FG VY+ K+ +LA A KV E SE E +++ E ++ D +
Sbjct: 15 IVGELGDGAFGKVYKAKNKETGALA----AAKVI-ETKSEEELEDYIVEIEILATCDHPY 69
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
+VKL G +++E GG + + E D + P + + + ++ +
Sbjct: 70 IVKLLGAYYHDGKLWIMIEFCPGGAVDAIM------LELDRGLTEPQIQVVCR---QMLE 120
Query: 244 GMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAP 303
+ +L K+ +HRDL A N ++ + +++ DFG++ +T R G WMAP
Sbjct: 121 ALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGT--PYWMAP 178
Query: 304 -----ESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVL 344
E++KD + +D+WS G+ L EMA + P+ L+ +VL
Sbjct: 179 EVVMCETMKDTPYDYKADIWSLGITLIEMAQI-EPPHHELNPMRVL 223
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 112/226 (49%), Gaps = 22/226 (9%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHH 183
I+ ELG+G+FG VY+ K+ +LA A KV E SE E +++ E ++ D +
Sbjct: 23 IVGELGDGAFGKVYKAKNKETGALA----AAKVI-ETKSEEELEDYIVEIEILATCDHPY 77
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
+VKL G +++E GG + + E D + P + + + ++ +
Sbjct: 78 IVKLLGAYYHDGKLWIMIEFCPGGAVDAIM------LELDRGLTEPQIQVVCR---QMLE 128
Query: 244 GMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAP 303
+ +L K+ +HRDL A N ++ + +++ DFG++ +T R G WMAP
Sbjct: 129 ALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGT--PYWMAP 186
Query: 304 -----ESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVL 344
E++KD + +D+WS G+ L EMA + P+ L+ +VL
Sbjct: 187 EVVMCETMKDTPYDYKADIWSLGITLIEMAQI-EPPHHELNPMRVL 231
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 106/205 (51%), Gaps = 13/205 (6%)
Query: 126 DELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVV 185
+++G G FG+VY+G + + ++A A V + +E K +F E VM ++V
Sbjct: 31 NKMGEGGFGVVYKGYVNN-TTVAVKKLAAMV--DITTEELKQQFDQEIKVMAKCQHENLV 87
Query: 186 KLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRI-LQMAAEVADG 244
+L G S+G+ ++ M G L + L SC ++ +PP + ++A A+G
Sbjct: 88 ELLGFSSDGDDLCLVYVYMPNGSLLDRL-SC-------LDGTPPLSWHMRCKIAQGAANG 139
Query: 245 MAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPE 304
+ +L + +HRD+ + N ++ + T K+ DFG+ R + R +MAPE
Sbjct: 140 INFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPE 199
Query: 305 SLKDGVFTSHSDVWSYGVVLWEMAT 329
+L+ G T SD++S+GVVL E+ T
Sbjct: 200 ALR-GEITPKSDIYSFGVVLLEIIT 223
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 106/205 (51%), Gaps = 13/205 (6%)
Query: 126 DELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVV 185
+++G G FG+VY+G + + ++A A V + +E K +F E VM ++V
Sbjct: 37 NKMGEGGFGVVYKGYVNN-TTVAVKKLAAMV--DITTEELKQQFDQEIKVMAKCQHENLV 93
Query: 186 KLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRI-LQMAAEVADG 244
+L G S+G+ ++ M G L + L SC ++ +PP + ++A A+G
Sbjct: 94 ELLGFSSDGDDLCLVYVYMPNGSLLDRL-SC-------LDGTPPLSWHMRCKIAQGAANG 145
Query: 245 MAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPE 304
+ +L + +HRD+ + N ++ + T K+ DFG+ R + R +MAPE
Sbjct: 146 INFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPE 205
Query: 305 SLKDGVFTSHSDVWSYGVVLWEMAT 329
+L+ G T SD++S+GVVL E+ T
Sbjct: 206 ALR-GEITPKSDIYSFGVVLLEIIT 229
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 99/215 (46%), Gaps = 31/215 (14%)
Query: 121 KVTILDELGNGSFGLVYRG--LIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKA 178
++ + + +G G+FG+V + KD AIK + SE E+ F+ E +
Sbjct: 10 EIEVEEVVGRGAFGVVCKAKWRAKDV--------AIK---QIESESERKAFIVELRQLSR 58
Query: 179 FDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMA 238
+ ++VKLYG NP ++ME GG L N L P T + +
Sbjct: 59 VNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYY-------TAAHAMSWC 109
Query: 239 AEVADGMAYLAD---KKFVHRDLAARNCM-VADDLTVKVGDFGMTRDIYETEYYRKGSRG 294
+ + G+AYL K +HRDL N + VA +K+ DFG DI KGS
Sbjct: 110 LQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAA 169
Query: 295 FLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
WMAPE + ++ DV+S+G++LWE+ T
Sbjct: 170 -----WMAPEVFEGSNYSEKCDVFSWGIILWEVIT 199
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 99/215 (46%), Gaps = 31/215 (14%)
Query: 121 KVTILDELGNGSFGLVYRG--LIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKA 178
++ + + +G G+FG+V + KD AIK + SE E+ F+ E +
Sbjct: 9 EIEVEEVVGRGAFGVVCKAKWRAKDV--------AIK---QIESESERKAFIVELRQLSR 57
Query: 179 FDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMA 238
+ ++VKLYG NP ++ME GG L N L P T + +
Sbjct: 58 VNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYY-------TAAHAMSWC 108
Query: 239 AEVADGMAYLAD---KKFVHRDLAARNCM-VADDLTVKVGDFGMTRDIYETEYYRKGSRG 294
+ + G+AYL K +HRDL N + VA +K+ DFG DI KGS
Sbjct: 109 LQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAA 168
Query: 295 FLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
WMAPE + ++ DV+S+G++LWE+ T
Sbjct: 169 -----WMAPEVFEGSNYSEKCDVFSWGIILWEVIT 198
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 86/177 (48%), Gaps = 21/177 (11%)
Query: 163 EREKAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAET 222
E + FL E VM+ + +V+K GV+ + I E + GG L+ ++S
Sbjct: 48 EETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKS------- 100
Query: 223 DVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI 282
++ P R+ A ++A GMAYL +HRDL + NC+V ++ V V DFG+ R +
Sbjct: 101 -MDSQYPWSQRV-SFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLM 158
Query: 283 YETEYYRKGSRGF-LPVR-----------WMAPESLKDGVFTSHSDVWSYGVVLWEM 327
+ + +G R P R WMAPE + + DV+S+G+VL E+
Sbjct: 159 VDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEI 215
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 108/237 (45%), Gaps = 23/237 (9%)
Query: 127 ELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVK 186
++G GS G+V K + A+K+ + +R + F NE +M+ + +VV+
Sbjct: 52 KIGEGSTGIVCLAREKH----SGRQVAVKMMDLRKQQRRELLF-NEVVIMRDYQHFNVVE 106
Query: 187 LYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMA 246
+Y G V+ME + GG L + + R + E +I + V +A
Sbjct: 107 MYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEE-----------QIATVCEAVLQALA 155
Query: 247 YLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESL 306
YL + +HRD+ + + ++ D VK+ DFG I + RK G WMAPE +
Sbjct: 156 YLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVG--TPYWMAPEVI 213
Query: 307 KDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKG----KSSNEYKVNP 359
++ + D+WS G+++ EM PY S Q + ++ K N +KV+P
Sbjct: 214 SRSLYATEVDIWSLGIMVIEMVD-GEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSP 269
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 111/233 (47%), Gaps = 25/233 (10%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASER--EKAEFLNEASVMKAFDTHHVV 185
LG GSFG V L KD + CA+KV ++ ++ +K L E ++K D +++
Sbjct: 40 LGKGSFGEVI--LCKD--KITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 95
Query: 186 KLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
KLY + ++ E+ GG+L + + S + +E D R + +V G+
Sbjct: 96 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR----------IIRQVLSGI 145
Query: 246 AYLADKKFVHRDLAARNCMV---ADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMA 302
Y+ K VHRDL N ++ + D +++ DFG++ E +K ++A
Sbjct: 146 TYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIGTAYYIA 202
Query: 303 PESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV-KGKSSNE 354
PE L G + DVWS GV+L+ + + P+ G + +L V KGK + E
Sbjct: 203 PEVL-HGTYDEKCDVWSTGVILYILLS-GCPPFNGANEYDILKKVEKGKYTFE 253
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 114/230 (49%), Gaps = 21/230 (9%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG G FG VY+G + D +A +K E ++ + +F E ++ ++++L
Sbjct: 38 LGRGGFGKVYKGRLADGXLVA-----VKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 92
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
G L++ M G + + LR RP+++ ++ P RI A A G+AY
Sbjct: 93 RGFCMTPTERLLVYPYMANGSVASCLRE-RPESQPPLDW--PKRQRI---ALGSARGLAY 146
Query: 248 L---ADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI-YETEYYRKGSRGFLPVRWMAP 303
L D K +HRD+ A N ++ ++ VGDFG+ + + Y+ + RG + +AP
Sbjct: 147 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGX--IGHIAP 204
Query: 304 ESLKDGVFTSHSDVWSYGVVLWEMAT-LASQPYQGLSNEQ---VLNWVKG 349
E L G + +DV+ YGV+L E+ T + L+N+ +L+WVKG
Sbjct: 205 EYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 254
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 108/222 (48%), Gaps = 24/222 (10%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTH-HVVK 186
+G+G FG VY+G+++D +A +K +S+ + ++ +F H H+V
Sbjct: 47 IGHGVFGKVYKGVLRDGAKVA-----LKRRTPESSQGIEEFETEIETL--SFCRHPHLVS 99
Query: 187 LYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMA 246
L G E N ++I + M G+LK +L +D+ + + L++ A G+
Sbjct: 100 LIGFCDERNEMILIYKYMENGNLKRHLYG------SDLPTMSMSWEQRLEICIGAARGLH 153
Query: 247 YLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYR-----KGSRGFLPVRWM 301
YL + +HRD+ + N ++ ++ K+ DFG+++ E + KG+ G++
Sbjct: 154 YLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYID---- 209
Query: 302 APESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
PE G T SDV+S+GVVL+E+ S Q L E V
Sbjct: 210 -PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMV 250
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 113/230 (49%), Gaps = 21/230 (9%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG G FG VY+G + D +A +K E + + +F E ++ ++++L
Sbjct: 46 LGRGGFGKVYKGRLADGTLVA-----VKRLKEERXQGGELQFQTEVEMISMAVHRNLLRL 100
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
G L++ M G + + LR RP+++ ++ P RI A A G+AY
Sbjct: 101 RGFCMTPTERLLVYPYMANGSVASCLRE-RPESQPPLDW--PKRQRI---ALGSARGLAY 154
Query: 248 LADK---KFVHRDLAARNCMVADDLTVKVGDFGMTRDI-YETEYYRKGSRGFLPVRWMAP 303
L D K +HRD+ A N ++ ++ VGDFG+ + + Y+ + RG + +AP
Sbjct: 155 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRG--TIGHIAP 212
Query: 304 ESLKDGVFTSHSDVWSYGVVLWEMAT-LASQPYQGLSNEQ---VLNWVKG 349
E L G + +DV+ YGV+L E+ T + L+N+ +L+WVKG
Sbjct: 213 EYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 262
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 111/233 (47%), Gaps = 25/233 (10%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASER--EKAEFLNEASVMKAFDTHHVV 185
LG GSFG V L KD + CA+KV ++ ++ +K L E ++K D +++
Sbjct: 34 LGKGSFGEVI--LCKD--KITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 89
Query: 186 KLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
KLY + ++ E+ GG+L + + S + +E D R + +V G+
Sbjct: 90 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR----------IIRQVLSGI 139
Query: 246 AYLADKKFVHRDLAARNCMV---ADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMA 302
Y+ K VHRDL N ++ + D +++ DFG++ E +K ++A
Sbjct: 140 TYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIGTAYYIA 196
Query: 303 PESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV-KGKSSNE 354
PE L G + DVWS GV+L+ + + P+ G + +L V KGK + E
Sbjct: 197 PEVLH-GTYDEKCDVWSTGVILYILLS-GCPPFNGANEYDILKKVEKGKYTFE 247
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 111/225 (49%), Gaps = 23/225 (10%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANE-NASEREKAEFLNEASVMKAFDTHHVVK 186
LG GSFG V + KD + + A+KV N+ +A ++ + L E ++K D +++K
Sbjct: 30 LGKGSFGEVLK--CKD--RITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMK 85
Query: 187 LYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMA 246
L+ ++ + + ++ EL GG+L + + + +E D R + +V G+
Sbjct: 86 LFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR----------IIKQVFSGIT 135
Query: 247 YLADKKFVHRDLAARNCMVAD---DLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAP 303
Y+ VHRDL N ++ D +K+ DFG++ ++ K G ++AP
Sbjct: 136 YMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLS-TCFQQNTKMKDRIG--TAYYIAP 192
Query: 304 ESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVK 348
E L+ G + DVWS GV+L+ + + + P+ G + +L V+
Sbjct: 193 EVLR-GTYDEKCDVWSAGVILYILLS-GTPPFYGKNEYDILKRVE 235
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 115/237 (48%), Gaps = 29/237 (12%)
Query: 120 SKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAF 179
S+ L++LGNG++ VY+GL K A+K ++ E + + E S+MK
Sbjct: 5 SQFKQLEKLGNGTYATVYKGLNKTTGVY----VALKEVKLDSEEGTPSTAIREISLMKEL 60
Query: 180 DTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPP--TLSRILQM 237
++V+LY V+ N ++ E M DLK Y+ D+ T V +P L+ +
Sbjct: 61 KHENIVRLYDVIHTENKLTLVFEFMDN-DLKKYM-----DSRT-VGNTPRGLELNLVKYF 113
Query: 238 AAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTR------DIYETEYYRKG 291
++ G+A+ + K +HRDL +N ++ +K+GDFG+ R + + +E
Sbjct: 114 QWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSE----- 168
Query: 292 SRGFLPVRWMAPESLKDG-VFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV 347
+ + + AP+ L +++ D+WS G +L EM T + G ++E+ L +
Sbjct: 169 ---VVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMIT-GKPLFPGTNDEEQLKLI 221
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 110/222 (49%), Gaps = 24/222 (10%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTH-HVVK 186
+G+G FG VY+G+++D +A +K +S+ + ++ +F H H+V
Sbjct: 47 IGHGVFGKVYKGVLRDGAKVA-----LKRRTPESSQGIEEFETEIETL--SFCRHPHLVS 99
Query: 187 LYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMA 246
L G E N ++I + M G+LK +L +D+ + + L++ A G+
Sbjct: 100 LIGFCDERNEMILIYKYMENGNLKRHLYG------SDLPTMSMSWEQRLEICIGAARGLH 153
Query: 247 YLADKKFVHRDLAARNCMVADDLTVKVGDFGMTR---DIYETEYYR--KGSRGFLPVRWM 301
YL + +HRD+ + N ++ ++ K+ DFG+++ ++ +T KG+ G++
Sbjct: 154 YLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYID---- 209
Query: 302 APESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
PE G T SDV+S+GVVL+E+ S Q L E V
Sbjct: 210 -PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMV 250
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 111/225 (49%), Gaps = 23/225 (10%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANE-NASEREKAEFLNEASVMKAFDTHHVVK 186
LG GSFG V + KD + + A+KV N+ +A ++ + L E ++K D +++K
Sbjct: 30 LGKGSFGEVLK--CKD--RITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMK 85
Query: 187 LYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMA 246
L+ ++ + + ++ EL GG+L + + + +E D R + +V G+
Sbjct: 86 LFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR----------IIKQVFSGIT 135
Query: 247 YLADKKFVHRDLAARNCMVAD---DLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAP 303
Y+ VHRDL N ++ D +K+ DFG++ ++ K G ++AP
Sbjct: 136 YMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLS-TCFQQNTKMKDRIG--TAYYIAP 192
Query: 304 ESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVK 348
E L+ G + DVWS GV+L+ + + + P+ G + +L V+
Sbjct: 193 EVLR-GTYDEKCDVWSAGVILYILLS-GTPPFYGKNEYDILKRVE 235
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 114/233 (48%), Gaps = 25/233 (10%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASER--EKAEFLNEASVMKAFDTHHVV 185
LG GSFG V L KD + CA+KV ++ ++ +K L E ++K D +++
Sbjct: 57 LGKGSFGEVI--LCKD--KITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 112
Query: 186 KLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
KLY + ++ E+ GG+L + + S + +E D +RI++ +V G+
Sbjct: 113 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDA-------ARIIR---QVLSGI 162
Query: 246 AYLADKKFVHRDLAARNCMV---ADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMA 302
Y+ K VHRDL N ++ + D +++ DFG++ E +K ++A
Sbjct: 163 TYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIGTAYYIA 219
Query: 303 PESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV-KGKSSNE 354
PE L G + DVWS GV+L+ + + P+ G + +L V KGK + E
Sbjct: 220 PEVLH-GTYDEKCDVWSTGVILYILLS-GCPPFNGANEYDILKKVEKGKYTFE 270
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 103/205 (50%), Gaps = 13/205 (6%)
Query: 126 DELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVV 185
++ G G FG+VY+G + + ++A A V + +E K +F E V ++V
Sbjct: 28 NKXGEGGFGVVYKGYVNN-TTVAVKKLAAMV--DITTEELKQQFDQEIKVXAKCQHENLV 84
Query: 186 KLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPP-TLSRILQMAAEVADG 244
+L G S+G+ ++ G L + L SC ++ +PP + ++A A+G
Sbjct: 85 ELLGFSSDGDDLCLVYVYXPNGSLLDRL-SC-------LDGTPPLSWHXRCKIAQGAANG 136
Query: 245 MAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPE 304
+ +L + +HRD+ + N ++ + T K+ DFG+ R + SR + APE
Sbjct: 137 INFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPE 196
Query: 305 SLKDGVFTSHSDVWSYGVVLWEMAT 329
+L+ G T SD++S+GVVL E+ T
Sbjct: 197 ALR-GEITPKSDIYSFGVVLLEIIT 220
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 114/233 (48%), Gaps = 25/233 (10%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASER--EKAEFLNEASVMKAFDTHHVV 185
LG GSFG V L KD + CA+KV ++ ++ +K L E ++K D +++
Sbjct: 58 LGKGSFGEVI--LCKD--KITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 113
Query: 186 KLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
KLY + ++ E+ GG+L + + S + +E D +RI++ +V G+
Sbjct: 114 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDA-------ARIIR---QVLSGI 163
Query: 246 AYLADKKFVHRDLAARNCMV---ADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMA 302
Y+ K VHRDL N ++ + D +++ DFG++ E +K ++A
Sbjct: 164 TYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIGTAYYIA 220
Query: 303 PESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV-KGKSSNE 354
PE L G + DVWS GV+L+ + + P+ G + +L V KGK + E
Sbjct: 221 PEVLH-GTYDEKCDVWSTGVILYILLS-GCPPFNGANEYDILKKVEKGKYTFE 271
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 111/225 (49%), Gaps = 23/225 (10%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANE-NASEREKAEFLNEASVMKAFDTHHVVK 186
LG GSFG V + KD + + A+KV N+ +A ++ + L E ++K D +++K
Sbjct: 30 LGKGSFGEVLK--CKD--RITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMK 85
Query: 187 LYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMA 246
L+ ++ + + ++ EL GG+L + + + +E D R + +V G+
Sbjct: 86 LFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR----------IIKQVFSGIT 135
Query: 247 YLADKKFVHRDLAARNCMVAD---DLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAP 303
Y+ VHRDL N ++ D +K+ DFG++ ++ K G ++AP
Sbjct: 136 YMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLST-CFQQNTKMKDRIG--TAYYIAP 192
Query: 304 ESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVK 348
E L+ G + DVWS GV+L+ + + + P+ G + +L V+
Sbjct: 193 EVLR-GTYDEKCDVWSAGVILYILLS-GTPPFYGKNEYDILKRVE 235
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 105/219 (47%), Gaps = 32/219 (14%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTH- 182
+++ +GNG++G VY+G LA AIKV + E E E E +++K + H
Sbjct: 28 LVELVGNGTYGQVYKGRHVKTGQLA----AIKVMDVTGDEEE--EIKQEINMLKKYSHHR 81
Query: 183 HVVKLYGVVSEGNPT------LVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSR--I 234
++ YG + NP ++ME G G + + +++ + + TL I
Sbjct: 82 NIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGN----------TLKEEWI 131
Query: 235 LQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRG 294
+ E+ G+++L K +HRD+ +N ++ ++ VK+ DFG++ + T R G
Sbjct: 132 AYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIG 191
Query: 295 FLPVRWMAPESLK-----DGVFTSHSDVWSYGVVLWEMA 328
P WMAPE + D + SD+WS G+ EMA
Sbjct: 192 -TPY-WMAPEVIACDENPDATYDFKSDLWSLGITAIEMA 228
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 99/205 (48%), Gaps = 19/205 (9%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTH- 182
IL LG GSFG V+ LI+ R + + E ++ E N+ +M + TH
Sbjct: 10 ILRTLGTGSFGRVH--LIRS-RHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHP 66
Query: 183 HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVA 242
+++++G + +IM+ + GG+L + LR +R P +++ AAEV
Sbjct: 67 FIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKS--------QRFPNPVAKF--YAAEVC 116
Query: 243 DGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMA 302
+ YL K ++RDL N ++ + +K+ DFG + + + Y G+ ++ A
Sbjct: 117 LALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTPDYI-----A 171
Query: 303 PESLKDGVFTSHSDVWSYGVVLWEM 327
PE + + D WS+G++++EM
Sbjct: 172 PEVVSTKPYNKSIDWWSFGILIYEM 196
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 112/244 (45%), Gaps = 22/244 (9%)
Query: 121 KVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVAN-ENASEREKAEFLNEASVMKAF 179
K L ++G GSFG L+K ++ IK N S +E+ E E +V+
Sbjct: 25 KYVRLQKIGEGSFGKAI--LVKSTEDGRQY--VIKEINISRMSSKEREESRREVAVLANM 80
Query: 180 DTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAA 239
++V+ E ++M+ GGDL R +A+ V +IL
Sbjct: 81 KHPNIVQYRESFEENGSLYIVMDYCEGGDLFK-----RINAQKGVLFQE---DQILDWFV 132
Query: 240 EVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVR 299
++ + ++ D+K +HRD+ ++N + D TV++GDFG+ R + T + G P
Sbjct: 133 QICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIG-TPY- 190
Query: 300 WMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSNEYKVNP 359
+++PE ++ + + SD+W+ G VL+E+ TL G VL + G P
Sbjct: 191 YLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSF-------P 243
Query: 360 PISL 363
P+SL
Sbjct: 244 PVSL 247
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 109/233 (46%), Gaps = 25/233 (10%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASER--EKAEFLNEASVMKAFDTHHVV 185
LG GSFG V L KD + CA+KV ++ ++ +K L E ++K D ++
Sbjct: 34 LGKGSFGEVI--LCKD--KITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIX 89
Query: 186 KLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
KLY + ++ E+ GG+L + + S + +E D R + +V G+
Sbjct: 90 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR----------IIRQVLSGI 139
Query: 246 AYLADKKFVHRDLAARNCMV---ADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMA 302
Y K VHRDL N ++ + D +++ DFG++ E +K ++A
Sbjct: 140 TYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKXKDKIGTAYYIA 196
Query: 303 PESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV-KGKSSNE 354
PE L G + DVWS GV+L+ + + P+ G + +L V KGK + E
Sbjct: 197 PEVLH-GTYDEKCDVWSTGVILYILLS-GCPPFNGANEYDILKKVEKGKYTFE 247
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 114/230 (49%), Gaps = 18/230 (7%)
Query: 127 ELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVK 186
+LG+G+FG V+ L+++ S E IK N++ S+ + E V+K+ D +++K
Sbjct: 29 KLGSGAFGDVH--LVEERSSGLER--VIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIK 84
Query: 187 LYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMA 246
++ V + + ++ME GG+L + S + + E + ++ ++ + +A
Sbjct: 85 IFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSE------GYVAELMKQMMNALA 138
Query: 247 YLADKKFVHRDLAARNCMVAD---DLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAP 303
Y + VH+DL N + D +K+ DFG+ ++++++ + + G +MAP
Sbjct: 139 YFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLA-ELFKSDEHSTNAAG--TALYMAP 195
Query: 304 ESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSN 353
E K V T D+WS GVV++ + T P+ G S E+V K N
Sbjct: 196 EVFKRDV-TFKCDIWSAGVVMYFLLT-GCLPFTGTSLEEVQQKATYKEPN 243
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 100/216 (46%), Gaps = 15/216 (6%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVAN--ENASEREKAEFLNEASVMKAFDT 181
I ++G G F VYR L P A+K + + +A+ + E ++K +
Sbjct: 36 IEKKIGRGQFSEVYRAAC----LLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 91
Query: 182 HHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEV 241
+V+K Y E N +++EL GDL ++ + ER+ + + ++
Sbjct: 92 PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERT------VWKYFVQL 145
Query: 242 ADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWM 301
+ ++ ++ +HRD+ N + VK+GD G+ R + ++ S P +M
Sbjct: 146 CSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGR-FFSSKTTAAHSLVGTPY-YM 203
Query: 302 APESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQG 337
+PE + + + SD+WS G +L+EMA L S P+ G
Sbjct: 204 SPERIHENGYNFKSDIWSLGCLLYEMAALQS-PFYG 238
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 110/229 (48%), Gaps = 15/229 (6%)
Query: 120 SKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASE-REKAEFLNEASVMKA 178
S +L LG GSFG V+ + K R + H A+KV + + R++ E ++
Sbjct: 28 SHFELLKVLGQGSFGKVFL-VRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILAD 86
Query: 179 FDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMA 238
+ VVKL+ +I++ + GGDL L E DV+
Sbjct: 87 VNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF----------YL 136
Query: 239 AEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPV 298
AE+A G+ +L ++RDL N ++ ++ +K+ DFG++++ + E +K V
Sbjct: 137 AELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHE--KKAYSFCGTV 194
Query: 299 RWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV 347
+MAPE + + +D WSYGV+++EM T S P+QG ++ + +
Sbjct: 195 EYMAPEVVNRQGHSHSADWWSYGVLMFEMLT-GSLPFQGKDRKETMTLI 242
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 30/210 (14%)
Query: 126 DELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLN-------EASVMKA 178
D LG G+FG V G L H A+K+ N R+K L+ E +K
Sbjct: 22 DTLGVGTFGKVKVGK----HELTGHKVAVKILN-----RQKIRSLDVVGKIRREIQNLKL 72
Query: 179 FDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMA 238
F H++KLY V+S + ++ME + GG+L +Y+ C+ + D + S R+ Q
Sbjct: 73 FRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYI--CK-NGRLDEKES----RRLFQ-- 123
Query: 239 AEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPV 298
++ G+ Y VHRDL N ++ + K+ DFG++ + + E+ R
Sbjct: 124 -QILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGS---P 179
Query: 299 RWMAPESLKDGVFTS-HSDVWSYGVVLWEM 327
+ APE + ++ D+WS GV+L+ +
Sbjct: 180 NYAAPEVISGRLYAGPEVDIWSSGVILYAL 209
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 103/224 (45%), Gaps = 18/224 (8%)
Query: 116 EVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA--EFLNEA 173
+++ + I+D+LG G VY L +D ++ AIK E+E+ F E
Sbjct: 7 KIINERYKIVDKLGGGGMSTVY--LAED--TILNIKVAIKAIFIPPREKEETLKRFEREV 62
Query: 174 SVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSR 233
++V + V E + ++ME + G L Y+ S P ++
Sbjct: 63 HNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIES----------HGPLSVDT 112
Query: 234 ILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSR 293
+ ++ DG+ + D + VHRD+ +N ++ + T+K+ DFG+ + + ET + +
Sbjct: 113 AINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS-LTQTNH 171
Query: 294 GFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQG 337
V++ +PE K +D++S G+VL+EM + P+ G
Sbjct: 172 VLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEML-VGEPPFNG 214
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 110/230 (47%), Gaps = 17/230 (7%)
Query: 120 SKVTILDELGNGSFGLVYRGLIKDFR-SLAEHPCAIKVANENASE-REKAEFLNEASVMK 177
S+ +L LG GSFG V+ L+K S A A+KV + + R++ E ++
Sbjct: 24 SQFELLKVLGQGSFGKVF--LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILV 81
Query: 178 AFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQM 237
+ +VKL+ +I++ + GGDL L E DV+
Sbjct: 82 EVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF----------Y 131
Query: 238 AAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLP 297
AE+A + +L ++RDL N ++ ++ +K+ DFG++++ + E +K
Sbjct: 132 LAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE--KKAYSFCGT 189
Query: 298 VRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV 347
V +MAPE + T +D WS+GV+++EM T + P+QG ++ + +
Sbjct: 190 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLT-GTLPFQGKDRKETMTMI 238
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 113/231 (48%), Gaps = 19/231 (8%)
Query: 120 SKVTILDELGNGSFGLVYRGLIKDFR-SLAEHPCAIKVANENASE-REKAEFLNEASVMK 177
S+ +L LG GSFG V+ L+K S A A+KV + + R++ E ++
Sbjct: 25 SQFELLKVLGQGSFGKVF--LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILV 82
Query: 178 AFDTHHVVKL-YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQ 236
+ +VKL Y +EG L I++ + GGDL L E DV+
Sbjct: 83 EVNHPFIVKLHYAFQTEGKLYL-ILDFLRGGDLFTRLSKEVMFTEEDVKF---------- 131
Query: 237 MAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFL 296
AE+A + +L ++RDL N ++ ++ +K+ DFG++++ + E +K
Sbjct: 132 YLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE--KKAYSFCG 189
Query: 297 PVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV 347
V +MAPE + T +D WS+GV+++EM T + P+QG ++ + +
Sbjct: 190 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLT-GTLPFQGKDRKETMTMI 239
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 117/249 (46%), Gaps = 35/249 (14%)
Query: 118 LRSKVTILDE-LGNGSFGLVYRGL---IKDFRSLAEHPCAIKV---ANENASEREKAEFL 170
+R++ I +E LG G+F +++G+ + D+ L E +KV A+ N SE F
Sbjct: 5 IRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSE----SFF 60
Query: 171 NEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPT 230
AS+M H+V YGV G+ +++ E + G L YL+ ++
Sbjct: 61 EAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKK---------NKNCIN 111
Query: 231 LSRILQMAAEVADGMAYLADKKFVHRDLAARNCMV--------ADDLTVKVGDFGMTRDI 282
+ L++A ++A M +L + +H ++ A+N ++ + +K+ D G++ +
Sbjct: 112 ILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITV 171
Query: 283 YETEYYRKGSRGFLPVRWMAPESLKDGV-FTSHSDVWSYGVVLWEMATLASQPYQGLSNE 341
+ ++ + W+ PE +++ +D WS+G LWE+ + +P L ++
Sbjct: 172 LPKDILQER------IPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQ 225
Query: 342 QVLNWVKGK 350
+ L + + +
Sbjct: 226 RKLQFYEDR 234
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 102/224 (45%), Gaps = 20/224 (8%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENA---SEREKAEFLNEASVMKAFDTHHV 184
LG GSFG V+ + +F+ + AIK ++ + + + + + A++ +
Sbjct: 25 LGKGSFGKVF---LAEFKKTNQF-FAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFL 80
Query: 185 VKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADG 244
++ +ME + GGDL +++SC LSR AAE+ G
Sbjct: 81 THMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK----------FDLSRATFYAAEIILG 130
Query: 245 MAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPE 304
+ +L K V+RDL N ++ D +K+ DFGM ++ + G ++APE
Sbjct: 131 LQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCG--TPDYIAPE 188
Query: 305 SLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVK 348
L + D WS+GV+L+EM + P+ G E++ + ++
Sbjct: 189 ILLGQKYNHSVDWWSFGVLLYEM-LIGQSPFHGQDEEELFHSIR 231
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 110/230 (47%), Gaps = 17/230 (7%)
Query: 120 SKVTILDELGNGSFGLVYRGLIKDFR-SLAEHPCAIKVANENASE-REKAEFLNEASVMK 177
S+ +L LG GSFG V+ L+K S A A+KV + + R++ E ++
Sbjct: 24 SQFELLKVLGQGSFGKVF--LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILV 81
Query: 178 AFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQM 237
+ +VKL+ +I++ + GGDL L E DV+
Sbjct: 82 EVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF----------Y 131
Query: 238 AAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLP 297
AE+A + +L ++RDL N ++ ++ +K+ DFG++++ + E +K
Sbjct: 132 LAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE--KKAYSFCGT 189
Query: 298 VRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV 347
V +MAPE + T +D WS+GV+++EM T + P+QG ++ + +
Sbjct: 190 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLT-GTLPFQGKDRKETMTMI 238
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 30/210 (14%)
Query: 126 DELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLN-------EASVMKA 178
D LG G+FG V G L H A+K+ N R+K L+ E +K
Sbjct: 17 DTLGVGTFGKVKIGE----HQLTGHKVAVKILN-----RQKIRSLDVVGKIKREIQNLKL 67
Query: 179 FDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMA 238
F H++KLY V+S ++ME + GG+L +Y+ C+ ++E R+ Q
Sbjct: 68 FRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYI--CKHGRVEEMEA-----RRLFQQI 120
Query: 239 AEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPV 298
D Y VHRDL N ++ + K+ DFG++ + + E+ R
Sbjct: 121 LSAVD---YCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGS---P 174
Query: 299 RWMAPESLKDGVFTS-HSDVWSYGVVLWEM 327
+ APE + ++ D+WS GV+L+ +
Sbjct: 175 NYAAPEVISGRLYAGPEVDIWSCGVILYAL 204
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 30/210 (14%)
Query: 126 DELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLN-------EASVMKA 178
D LG G+FG V G L H A+K+ N R+K L+ E +K
Sbjct: 17 DTLGVGTFGKVKIGE----HQLTGHKVAVKILN-----RQKIRSLDVVGKIKREIQNLKL 67
Query: 179 FDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMA 238
F H++KLY V+S ++ME + GG+L +Y+ C+ ++E R+ Q
Sbjct: 68 FRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYI--CKHGRVEEMEA-----RRLFQQI 120
Query: 239 AEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPV 298
D Y VHRDL N ++ + K+ DFG++ + + E+ R
Sbjct: 121 LSAVD---YCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGS---P 174
Query: 299 RWMAPESLKDGVFTS-HSDVWSYGVVLWEM 327
+ APE + ++ D+WS GV+L+ +
Sbjct: 175 NYAAPEVISGRLYAGPEVDIWSCGVILYAL 204
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 108/214 (50%), Gaps = 27/214 (12%)
Query: 127 ELGNGSFGLVYRG-LIKDFRSLAEHPCAIKVANENASEREK-AEFLNEASVMKAFDTHHV 184
++G G FGLV++G L+KD +A + + EK EF E +M + ++
Sbjct: 26 QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 185 VKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADG 244
VKLYG++ NP ++ME + GDL + L + P S L++ ++A G
Sbjct: 86 VKLYGLMH--NPPRMVMEFVPCGDLYHRLLD---------KAHPIKWSVKLRLMLDIALG 134
Query: 245 MAYLADKK--FVHRDLAARNCMVAD-----DLTVKVGDFGMTRDIYETEYYRKGSRGFLP 297
+ Y+ ++ VHRDL + N + + KV DFG+++ ++ + G G
Sbjct: 135 IEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ---QSVHSVSGLLGNF- 190
Query: 298 VRWMAPESL--KDGVFTSHSDVWSYGVVLWEMAT 329
+WMAPE++ ++ +T +D +S+ ++L+ + T
Sbjct: 191 -QWMAPETIGAEEESYTEKADTYSFAMILYTILT 223
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 102/224 (45%), Gaps = 20/224 (8%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENA---SEREKAEFLNEASVMKAFDTHHV 184
LG GSFG V+ + +F+ + AIK ++ + + + + + A++ +
Sbjct: 26 LGKGSFGKVF---LAEFKKTNQF-FAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFL 81
Query: 185 VKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADG 244
++ +ME + GGDL +++SC LSR AAE+ G
Sbjct: 82 THMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK----------FDLSRATFYAAEIILG 131
Query: 245 MAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPE 304
+ +L K V+RDL N ++ D +K+ DFGM ++ + G ++APE
Sbjct: 132 LQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCG--TPDYIAPE 189
Query: 305 SLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVK 348
L + D WS+GV+L+EM + P+ G E++ + ++
Sbjct: 190 ILLGQKYNHSVDWWSFGVLLYEM-LIGQSPFHGQDEEELFHSIR 232
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 114/250 (45%), Gaps = 25/250 (10%)
Query: 115 WEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEAS 174
++ L + + +LG+G++G V L KD + AE I + + L+E +
Sbjct: 16 FQGLSDRYQRVKKLGSGAYGEVL--LCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVA 73
Query: 175 VMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRI 234
V+K D +++KLY + ++ME+ GG+L + + + +E D
Sbjct: 74 VLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAA--------- 124
Query: 235 LQMAAEVADGMAYLADKKFVHRDLAARNCMV---ADDLTVKVGDFGMTRDIYETEYYRKG 291
+ +V G YL VHRDL N ++ + D +K+ DFG++ E K
Sbjct: 125 -VIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF---EVGGKM 180
Query: 292 SRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV-KGK 350
++APE L+ + DVWS GV+L+ + P+ G +++++L V KGK
Sbjct: 181 KERLGTAYYIAPEVLRKK-YDEKCDVWSCGVILY-ILLCGYPPFGGQTDQEILKRVEKGK 238
Query: 351 SSNEYKVNPP 360
+ +PP
Sbjct: 239 ----FSFDPP 244
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 97/205 (47%), Gaps = 17/205 (8%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHV 184
L+++G G++G+VY+ + E K+ E E + + E S++K ++
Sbjct: 7 LEKIGEGTYGVVYKAQ----NNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 185 VKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADG 244
VKLY V+ +++ E + DLK L C E+ +S ++ +G
Sbjct: 63 VKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKS---------FLLQLLNG 112
Query: 245 MAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPE 304
+AY D++ +HRDL +N ++ + +K+ DFG+ R RK + + + + AP+
Sbjct: 113 IAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP--VRKYTHEIVTLWYRAPD 170
Query: 305 SLKDG-VFTSHSDVWSYGVVLWEMA 328
L +++ D+WS G + EM
Sbjct: 171 VLMGSKKYSTTIDIWSVGCIFAEMV 195
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 117/249 (46%), Gaps = 35/249 (14%)
Query: 118 LRSKVTILDE-LGNGSFGLVYRGL---IKDFRSLAEHPCAIKV---ANENASEREKAEFL 170
+R++ I +E LG G+F +++G+ + D+ L E +KV A+ N SE F
Sbjct: 5 IRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSE----SFF 60
Query: 171 NEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPT 230
AS+M H+V YGV G+ +++ E + G L YL+ ++
Sbjct: 61 EAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKK---------NKNCIN 111
Query: 231 LSRILQMAAEVADGMAYLADKKFVHRDLAARNCMV--------ADDLTVKVGDFGMTRDI 282
+ L++A ++A M +L + +H ++ A+N ++ + +K+ D G++ +
Sbjct: 112 ILWKLEVAKQLAWAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITV 171
Query: 283 YETEYYRKGSRGFLPVRWMAPESLKDGV-FTSHSDVWSYGVVLWEMATLASQPYQGLSNE 341
+ ++ + W+ PE +++ +D WS+G LWE+ + +P L ++
Sbjct: 172 LPKDILQER------IPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQ 225
Query: 342 QVLNWVKGK 350
+ L + + +
Sbjct: 226 RKLQFYEDR 234
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 97/205 (47%), Gaps = 17/205 (8%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHV 184
L+++G G++G+VY+ + E K+ E E + + E S++K ++
Sbjct: 7 LEKIGEGTYGVVYKAQ----NNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 185 VKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADG 244
VKLY V+ +++ E + DLK L C E+ +S ++ +G
Sbjct: 63 VKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKS---------FLLQLLNG 112
Query: 245 MAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPE 304
+AY D++ +HRDL +N ++ + +K+ DFG+ R RK + + + + AP+
Sbjct: 113 IAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP--VRKYTHEVVTLWYRAPD 170
Query: 305 SLKDG-VFTSHSDVWSYGVVLWEMA 328
L +++ D+WS G + EM
Sbjct: 171 VLMGSKKYSTTIDIWSVGCIFAEMV 195
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 98/208 (47%), Gaps = 17/208 (8%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHV 184
L+++G G++G+VY+ + E K+ E E + + E S++K ++
Sbjct: 7 LEKIGEGTYGVVYKAQ----NNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 185 VKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADG 244
VKLY V+ +++ E + DLK L C E+ +S ++ +G
Sbjct: 63 VKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKS---------FLLQLLNG 112
Query: 245 MAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPE 304
+AY D++ +HRDL +N ++ + +K+ DFG+ R RK + + + + AP+
Sbjct: 113 IAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP--VRKYTHEVVTLWYRAPD 170
Query: 305 SLKDG-VFTSHSDVWSYGVVLWEMATLA 331
L +++ D+WS G + EM A
Sbjct: 171 VLMGSKKYSTTIDIWSVGCIFAEMVNGA 198
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 110/215 (51%), Gaps = 29/215 (13%)
Query: 127 ELGNGSFGLVYRG-LIKDFRSLAEHPCAIKVANENASE--REKAEFLNEASVMKAFDTHH 183
++G G FGLV++G L+KD +S+ I +E +E + EF E +M + +
Sbjct: 26 QIGKGGFGLVHKGRLVKD-KSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPN 84
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
+VKLYG++ NP ++ME + GDL + L + P S L++ ++A
Sbjct: 85 IVKLYGLMH--NPPRMVMEFVPCGDLYHRLLD---------KAHPIKWSVKLRLMLDIAL 133
Query: 244 GMAYLADKK--FVHRDLAARNCMVAD-----DLTVKVGDFGMTRDIYETEYYRKGSRGFL 296
G+ Y+ ++ VHRDL + N + + KV DFG ++ ++ + G G
Sbjct: 134 GIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ---QSVHSVSGLLGNF 190
Query: 297 PVRWMAPESL--KDGVFTSHSDVWSYGVVLWEMAT 329
+WMAPE++ ++ +T +D +S+ ++L+ + T
Sbjct: 191 --QWMAPETIGAEEESYTEKADTYSFAMILYTILT 223
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 110/243 (45%), Gaps = 28/243 (11%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREK---AEFLNEASVMKAFDTHHV 184
LG G++G+VY G R L+ +++A + ER+ E ++ K ++
Sbjct: 16 LGKGTYGIVYAG-----RDLSNQ---VRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNI 67
Query: 185 VKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADG 244
V+ G SE + ME + GG L LRS + D E++ I ++ +G
Sbjct: 68 VQYLGSFSENGFIKIFMEQVPGGSLSALLRS-KWGPLKDNEQT------IGFYTKQILEG 120
Query: 245 MAYLADKKFVHRDLAARNCMVAD-DLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAP 303
+ YL D + VHRD+ N ++ +K+ DFG ++ + + G L ++MAP
Sbjct: 121 LKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTL--QYMAP 178
Query: 304 ESLKDGV--FTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSNEYKVNPPI 361
E + G + +D+WS G + EMAT P+ L Q + G +KV+P I
Sbjct: 179 EIIDKGPRGYGKAADIWSLGCTIIEMAT-GKPPFYELGEPQAAMFKVGM----FKVHPEI 233
Query: 362 SLS 364
S
Sbjct: 234 PES 236
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 109/248 (43%), Gaps = 29/248 (11%)
Query: 119 RSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKA 178
RS + ++G GS G+V ++ L A+K + +R + F NE +M+
Sbjct: 19 RSYLDNFIKIGEGSTGIVCIATVRSSGKL----VAVKKMDLRKQQRRELLF-NEVVIMRD 73
Query: 179 FDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMA 238
+ +VV++Y G+ V+ME + GG L + + R + E +I +
Sbjct: 74 YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE-----------QIAAVC 122
Query: 239 AEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPV 298
V ++ L + +HRD+ + + ++ D VK+ DFG + + RK G
Sbjct: 123 LAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGT--P 180
Query: 299 RWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVK-------GKS 351
WMAPE + + D+WS G+++ EM PY NE L +K +
Sbjct: 181 YWMAPELISRLPYGPEVDIWSLGIMVIEMVD-GEPPY---FNEPPLKAMKMIRDNLPPRL 236
Query: 352 SNEYKVNP 359
N +KV+P
Sbjct: 237 KNLHKVSP 244
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 107/227 (47%), Gaps = 21/227 (9%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASER--EKAEFLNEASVMKAFDT 181
I +ELG+G F +V + K L IK AS R + E E S+++
Sbjct: 16 IGEELGSGQFAIVKKCREKS-TGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLH 74
Query: 182 HHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEV 241
H+V+ L+ V ++I+EL+ GG+L ++L +E E + + +IL
Sbjct: 75 HNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE---EEATSFIKQIL------ 125
Query: 242 ADGMAYLADKKFVHRDLAARNCMVADDLT----VKVGDFGMTRDIYETEYYRKGSRGFLP 297
DG+ YL KK H DL N M+ D +K+ DFG+ +I + ++ F
Sbjct: 126 -DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN---IFGT 181
Query: 298 VRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVL 344
++APE + +D+WS GV+ + + + AS P+ G + ++ L
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS-PFLGDTKQETL 227
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 109/248 (43%), Gaps = 29/248 (11%)
Query: 119 RSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKA 178
RS + ++G GS G+V ++ L A+K + +R + F NE +M+
Sbjct: 23 RSYLDNFIKIGEGSTGIVCIATVRSSGKL----VAVKKMDLRKQQRRELLF-NEVVIMRD 77
Query: 179 FDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMA 238
+ +VV++Y G+ V+ME + GG L + + R + E +I +
Sbjct: 78 YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE-----------QIAAVC 126
Query: 239 AEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPV 298
V ++ L + +HRD+ + + ++ D VK+ DFG + + RK G
Sbjct: 127 LAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGT--P 184
Query: 299 RWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVK-------GKS 351
WMAPE + + D+WS G+++ EM PY NE L +K +
Sbjct: 185 YWMAPELISRLPYGPEVDIWSLGIMVIEMVD-GEPPY---FNEPPLKAMKMIRDNLPPRL 240
Query: 352 SNEYKVNP 359
N +KV+P
Sbjct: 241 KNLHKVSP 248
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 107/227 (47%), Gaps = 21/227 (9%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASER--EKAEFLNEASVMKAFDT 181
I +ELG+G F +V + K L IK AS R + E E S+++
Sbjct: 16 IGEELGSGQFAIVKKCREKS-TGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLH 74
Query: 182 HHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEV 241
H+V+ L+ V ++I+EL+ GG+L ++L +E E + + +IL
Sbjct: 75 HNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE---EEATSFIKQIL------ 125
Query: 242 ADGMAYLADKKFVHRDLAARNCMVADDLT----VKVGDFGMTRDIYETEYYRKGSRGFLP 297
DG+ YL KK H DL N M+ D +K+ DFG+ +I + ++ F
Sbjct: 126 -DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN---IFGT 181
Query: 298 VRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVL 344
++APE + +D+WS GV+ + + + AS P+ G + ++ L
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS-PFLGDTKQETL 227
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 107/227 (47%), Gaps = 21/227 (9%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASER--EKAEFLNEASVMKAFDT 181
I +ELG+G F +V + K L IK AS R + E E S+++
Sbjct: 16 IGEELGSGQFAIVKKCREKS-TGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLH 74
Query: 182 HHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEV 241
H+V+ L+ V ++I+EL+ GG+L ++L +E E + + +IL
Sbjct: 75 HNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE---EEATSFIKQIL------ 125
Query: 242 ADGMAYLADKKFVHRDLAARNCMVADDLT----VKVGDFGMTRDIYETEYYRKGSRGFLP 297
DG+ YL KK H DL N M+ D +K+ DFG+ +I + ++ F
Sbjct: 126 -DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN---IFGT 181
Query: 298 VRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVL 344
++APE + +D+WS GV+ + + + AS P+ G + ++ L
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS-PFLGDTKQETL 227
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 109/238 (45%), Gaps = 25/238 (10%)
Query: 127 ELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVK 186
+LG+G++G V L KD + AE I + + L+E +V+K D +++K
Sbjct: 11 KLGSGAYGEVL--LCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMK 68
Query: 187 LYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMA 246
LY + ++ME+ GG+L + + + +E D + +V G
Sbjct: 69 LYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV----------IMKQVLSGTT 118
Query: 247 YLADKKFVHRDLAARNCMV---ADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAP 303
YL VHRDL N ++ + D +K+ DFG++ E K ++AP
Sbjct: 119 YLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF---EVGGKMKERLGTAYYIAP 175
Query: 304 ESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV-KGKSSNEYKVNPP 360
E L+ + DVWS GV+L+ + P+ G +++++L V KGK + +PP
Sbjct: 176 EVLRKK-YDEKCDVWSCGVILY-ILLCGYPPFGGQTDQEILKRVEKGK----FSFDPP 227
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 109/248 (43%), Gaps = 29/248 (11%)
Query: 119 RSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKA 178
RS + ++G GS G+V ++ L A+K + +R + F NE +M+
Sbjct: 28 RSYLDNFIKIGEGSTGIVCIATVRSSGKL----VAVKKMDLRKQQRRELLF-NEVVIMRD 82
Query: 179 FDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMA 238
+ +VV++Y G+ V+ME + GG L + + R + E +I +
Sbjct: 83 YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE-----------QIAAVC 131
Query: 239 AEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPV 298
V ++ L + +HRD+ + + ++ D VK+ DFG + + RK G
Sbjct: 132 LAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGT--P 189
Query: 299 RWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVK-------GKS 351
WMAPE + + D+WS G+++ EM PY NE L +K +
Sbjct: 190 YWMAPELISRLPYGPEVDIWSLGIMVIEMVD-GEPPY---FNEPPLKAMKMIRDNLPPRL 245
Query: 352 SNEYKVNP 359
N +KV+P
Sbjct: 246 KNLHKVSP 253
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 109/248 (43%), Gaps = 29/248 (11%)
Query: 119 RSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKA 178
RS + ++G GS G+V ++ L A+K + +R + F NE +M+
Sbjct: 30 RSYLDNFIKIGEGSTGIVCIATVRSSGKL----VAVKKMDLRKQQRRELLF-NEVVIMRD 84
Query: 179 FDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMA 238
+ +VV++Y G+ V+ME + GG L + + R + E +I +
Sbjct: 85 YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE-----------QIAAVC 133
Query: 239 AEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPV 298
V ++ L + +HRD+ + + ++ D VK+ DFG + + RK G
Sbjct: 134 LAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGT--P 191
Query: 299 RWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVK-------GKS 351
WMAPE + + D+WS G+++ EM PY NE L +K +
Sbjct: 192 YWMAPELISRLPYGPEVDIWSLGIMVIEMVD-GEPPY---FNEPPLKAMKMIRDNLPPRL 247
Query: 352 SNEYKVNP 359
N +KV+P
Sbjct: 248 KNLHKVSP 255
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 107/227 (47%), Gaps = 21/227 (9%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASER--EKAEFLNEASVMKAFDT 181
I +ELG+G F +V + K L IK AS R + E E S+++
Sbjct: 16 IGEELGSGQFAIVKKCREKS-TGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLH 74
Query: 182 HHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEV 241
H+V+ L+ V ++I+EL+ GG+L ++L +E E + + +IL
Sbjct: 75 HNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE---EEATSFIKQIL------ 125
Query: 242 ADGMAYLADKKFVHRDLAARNCMVADDLT----VKVGDFGMTRDIYETEYYRKGSRGFLP 297
DG+ YL KK H DL N M+ D +K+ DFG+ +I + ++ F
Sbjct: 126 -DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN---IFGT 181
Query: 298 VRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVL 344
++APE + +D+WS GV+ + + + AS P+ G + ++ L
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS-PFLGDTKQETL 227
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 110/243 (45%), Gaps = 28/243 (11%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREK---AEFLNEASVMKAFDTHHV 184
LG G++G+VY G R L+ +++A + ER+ E ++ K ++
Sbjct: 30 LGKGTYGIVYAG-----RDLSNQ---VRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNI 81
Query: 185 VKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADG 244
V+ G SE + ME + GG L LRS + D E++ I ++ +G
Sbjct: 82 VQYLGSFSENGFIKIFMEQVPGGSLSALLRS-KWGPLKDNEQT------IGFYTKQILEG 134
Query: 245 MAYLADKKFVHRDLAARNCMVAD-DLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAP 303
+ YL D + VHRD+ N ++ +K+ DFG ++ + + G L ++MAP
Sbjct: 135 LKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTL--QYMAP 192
Query: 304 ESLKDGV--FTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSNEYKVNPPI 361
E + G + +D+WS G + EMAT P+ L Q + G +KV+P I
Sbjct: 193 EIIDKGPRGYGKAADIWSLGCTIIEMAT-GKPPFYELGEPQAAMFKVGM----FKVHPEI 247
Query: 362 SLS 364
S
Sbjct: 248 PES 250
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 105/229 (45%), Gaps = 26/229 (11%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG G FG V ++ + + C + +A LNE +++ ++ VV L
Sbjct: 192 LGKGGFGEVCACQVRATGKM--YACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSL 249
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYL----RSCRPDAETDVERSPPTLSRILQMAAEVAD 243
+ +++ LM GGDLK ++ ++ P+A R + AAE+
Sbjct: 250 AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEA------------RAVFYAAEICC 297
Query: 244 GMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAP 303
G+ L ++ V+RDL N ++ D +++ D G+ + E + KG G V +MAP
Sbjct: 298 GLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTI-KGRVG--TVGYMAP 354
Query: 304 ESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQ----GLSNEQVLNWVK 348
E +K+ +T D W+ G +L+EM S P+Q + E+V VK
Sbjct: 355 EVVKNERYTFSPDWWALGCLLYEMIAGQS-PFQQRKKKIKREEVERLVK 402
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 92/201 (45%), Gaps = 18/201 (8%)
Query: 127 ELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVK 186
++G GS G+V K A+K + +R + F NE +M+ + +VV
Sbjct: 52 KIGEGSTGIVCIATEKH----TGKQVAVKKMDLRKQQRRELLF-NEVVIMRDYHHDNVVD 106
Query: 187 LYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMA 246
+Y G+ V+ME + GG L + + R + E +I + V ++
Sbjct: 107 MYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE-----------QIATVCLSVLRALS 155
Query: 247 YLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESL 306
YL ++ +HRD+ + + ++ D +K+ DFG + + RK G WMAPE +
Sbjct: 156 YLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVG--TPYWMAPEVI 213
Query: 307 KDGVFTSHSDVWSYGVVLWEM 327
+ + D+WS G+++ EM
Sbjct: 214 SRLPYGTEVDIWSLGIMVIEM 234
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 107/227 (47%), Gaps = 21/227 (9%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASER--EKAEFLNEASVMKAFDT 181
I +ELG+G F +V + K L IK AS R + E E S+++
Sbjct: 16 IGEELGSGQFAIVKKCREKS-TGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLH 74
Query: 182 HHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEV 241
H+V+ L+ V ++I+EL+ GG+L ++L +E E + + +IL
Sbjct: 75 HNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE---EEATSFIKQIL------ 125
Query: 242 ADGMAYLADKKFVHRDLAARNCMVADDLT----VKVGDFGMTRDIYETEYYRKGSRGFLP 297
DG+ YL KK H DL N M+ D +K+ DFG+ +I + ++ F
Sbjct: 126 -DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN---IFGT 181
Query: 298 VRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVL 344
++APE + +D+WS GV+ + + + AS P+ G + ++ L
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS-PFLGDTKQETL 227
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 110/215 (51%), Gaps = 29/215 (13%)
Query: 127 ELGNGSFGLVYRG-LIKDFRSLAEHPCAIKVANENASE--REKAEFLNEASVMKAFDTHH 183
++G G FGLV++G L+KD +S+ I +E +E + EF E +M + +
Sbjct: 26 QIGKGGFGLVHKGRLVKD-KSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPN 84
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
+VKLYG++ NP ++ME + GDL + L + P S L++ ++A
Sbjct: 85 IVKLYGLMH--NPPRMVMEFVPCGDLYHRLLD---------KAHPIKWSVKLRLMLDIAL 133
Query: 244 GMAYLADKK--FVHRDLAARNCMVAD-----DLTVKVGDFGMTRDIYETEYYRKGSRGFL 296
G+ Y+ ++ VHRDL + N + + KV DF +++ ++ + G G
Sbjct: 134 GIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ---QSVHSVSGLLGNF 190
Query: 297 PVRWMAPESL--KDGVFTSHSDVWSYGVVLWEMAT 329
+WMAPE++ ++ +T +D +S+ ++L+ + T
Sbjct: 191 --QWMAPETIGAEEESYTEKADTYSFAMILYTILT 223
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 109/248 (43%), Gaps = 29/248 (11%)
Query: 119 RSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKA 178
RS + ++G GS G+V ++ L A+K + +R + F NE +M+
Sbjct: 73 RSYLDNFIKIGEGSTGIVCIATVRSSGKL----VAVKKMDLRKQQRRELLF-NEVVIMRD 127
Query: 179 FDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMA 238
+ +VV++Y G+ V+ME + GG L + + R + E +I +
Sbjct: 128 YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE-----------QIAAVC 176
Query: 239 AEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPV 298
V ++ L + +HRD+ + + ++ D VK+ DFG + + RK G
Sbjct: 177 LAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGT--P 234
Query: 299 RWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVK-------GKS 351
WMAPE + + D+WS G+++ EM PY NE L +K +
Sbjct: 235 YWMAPELISRLPYGPEVDIWSLGIMVIEMVD-GEPPY---FNEPPLKAMKMIRDNLPPRL 290
Query: 352 SNEYKVNP 359
N +KV+P
Sbjct: 291 KNLHKVSP 298
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 105/229 (45%), Gaps = 26/229 (11%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG G FG V ++ + + C + +A LNE +++ ++ VV L
Sbjct: 192 LGKGGFGEVCACQVRATGKM--YACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSL 249
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYL----RSCRPDAETDVERSPPTLSRILQMAAEVAD 243
+ +++ LM GGDLK ++ ++ P+A R + AAE+
Sbjct: 250 AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEA------------RAVFYAAEICC 297
Query: 244 GMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAP 303
G+ L ++ V+RDL N ++ D +++ D G+ + E + KG G V +MAP
Sbjct: 298 GLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTI-KGRVG--TVGYMAP 354
Query: 304 ESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQ----GLSNEQVLNWVK 348
E +K+ +T D W+ G +L+EM S P+Q + E+V VK
Sbjct: 355 EVVKNERYTFSPDWWALGCLLYEMIAGQS-PFQQRKKKIKREEVERLVK 402
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 21/207 (10%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANEN--ASEREKAEFLNEASVMKAFDT 181
I+ LG GSFG V + + A+K+ N+ A + E S ++
Sbjct: 8 IVKTLGEGSFGKVKLA----YHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH 63
Query: 182 HHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEV 241
H++KLY V+ + ++++E G +L +Y+ V+R + + ++
Sbjct: 64 PHIIKLYDVIKSKDEIIMVIE-YAGNELFDYI----------VQRDKMSEQEARRFFQQI 112
Query: 242 ADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWM 301
+ Y K VHRDL N ++ + L VK+ DFG++ +I + K S G +
Sbjct: 113 ISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKTSCG--SPNYA 169
Query: 302 APESLKDGVFTS-HSDVWSYGVVLWEM 327
APE + ++ DVWS GV+L+ M
Sbjct: 170 APEVISGKLYAGPEVDVWSCGVILYVM 196
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 21/207 (10%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANEN--ASEREKAEFLNEASVMKAFDT 181
I+ LG GSFG V + + A+K+ N+ A + E S ++
Sbjct: 17 IVKTLGEGSFGKVKLA----YHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH 72
Query: 182 HHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEV 241
H++KLY V+ + ++++E G +L +Y+ V+R + + ++
Sbjct: 73 PHIIKLYDVIKSKDEIIMVIE-YAGNELFDYI----------VQRDKMSEQEARRFFQQI 121
Query: 242 ADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWM 301
+ Y K VHRDL N ++ + L VK+ DFG++ +I + K S G +
Sbjct: 122 ISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKTSCG--SPNYA 178
Query: 302 APESLKDGVFTS-HSDVWSYGVVLWEM 327
APE + ++ DVWS GV+L+ M
Sbjct: 179 APEVISGKLYAGPEVDVWSCGVILYVM 205
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 21/207 (10%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANEN--ASEREKAEFLNEASVMKAFDT 181
I+ LG GSFG V + + A+K+ N+ A + E S ++
Sbjct: 18 IVKTLGEGSFGKVKLA----YHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH 73
Query: 182 HHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEV 241
H++KLY V+ + ++++E G +L +Y+ V+R + + ++
Sbjct: 74 PHIIKLYDVIKSKDEIIMVIE-YAGNELFDYI----------VQRDKMSEQEARRFFQQI 122
Query: 242 ADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWM 301
+ Y K VHRDL N ++ + L VK+ DFG++ +I + K S G +
Sbjct: 123 ISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKTSCG--SPNYA 179
Query: 302 APESLKDGVFTS-HSDVWSYGVVLWEM 327
APE + ++ DVWS GV+L+ M
Sbjct: 180 APEVISGKLYAGPEVDVWSCGVILYVM 206
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 21/207 (10%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANEN--ASEREKAEFLNEASVMKAFDT 181
I+ LG GSFG V + + A+K+ N+ A + E S ++
Sbjct: 12 IVKTLGEGSFGKVKLA----YHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH 67
Query: 182 HHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEV 241
H++KLY V+ + ++++E G +L +Y+ V+R + + ++
Sbjct: 68 PHIIKLYDVIKSKDEIIMVIE-YAGNELFDYI----------VQRDKMSEQEARRFFQQI 116
Query: 242 ADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWM 301
+ Y K VHRDL N ++ + L VK+ DFG++ +I + K S G +
Sbjct: 117 ISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKTSCG--SPNYA 173
Query: 302 APESLKDGVFTS-HSDVWSYGVVLWEM 327
APE + ++ DVWS GV+L+ M
Sbjct: 174 APEVISGKLYAGPEVDVWSCGVILYVM 200
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 109/248 (43%), Gaps = 29/248 (11%)
Query: 119 RSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKA 178
RS + ++G GS G+V ++ L A+K + +R + F NE +M+
Sbjct: 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKL----VAVKKMDLRKQQRRELLF-NEVVIMRD 204
Query: 179 FDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMA 238
+ +VV++Y G+ V+ME + GG L + + R + E +I +
Sbjct: 205 YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE-----------QIAAVC 253
Query: 239 AEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPV 298
V ++ L + +HRD+ + + ++ D VK+ DFG + + RK G
Sbjct: 254 LAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGT--P 311
Query: 299 RWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVK-------GKS 351
WMAPE + + D+WS G+++ EM PY NE L +K +
Sbjct: 312 YWMAPELISRLPYGPEVDIWSLGIMVIEMVD-GEPPY---FNEPPLKAMKMIRDNLPPRL 367
Query: 352 SNEYKVNP 359
N +KV+P
Sbjct: 368 KNLHKVSP 375
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 22/211 (10%)
Query: 119 RSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFL-NEASVMK 177
+ K T +++G G+ G VY + D + E + + N ++ K E + NE VM+
Sbjct: 20 KKKYTRFEKIGQGASGTVYTAM--DVATGQE----VAIRQMNLQQQPKKELIINEILVMR 73
Query: 178 AFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYL-RSCRPDAETDVERSPPTLSRILQ 236
++V G+ V+ME + GG L + + +C + + I
Sbjct: 74 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQ------------IAA 121
Query: 237 MAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFL 296
+ E + +L + +HRD+ + N ++ D +VK+ DFG I + R G
Sbjct: 122 VCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVG-- 179
Query: 297 PVRWMAPESLKDGVFTSHSDVWSYGVVLWEM 327
WMAPE + + D+WS G++ EM
Sbjct: 180 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEM 210
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 107/228 (46%), Gaps = 22/228 (9%)
Query: 127 ELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVK 186
+LG+G++G V L +D + E I + + S ++ L E +V+K D +++K
Sbjct: 44 KLGSGAYGEVL--LCRDKVTHVERAIKI-IRKTSVSTSSNSKLLEEVAVLKLLDHPNIMK 100
Query: 187 LYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMA 246
LY + ++ME GG+L + + E D + +V G+
Sbjct: 101 LYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDA----------AVIIKQVLSGVT 150
Query: 247 YLADKKFVHRDLAARNCMVAD---DLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAP 303
YL VHRDL N ++ D +K+ DFG++ ++E + K G ++AP
Sbjct: 151 YLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSA-VFENQKKMKERLG--TAYYIAP 207
Query: 304 ESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV-KGK 350
E L+ + DVWS GV+L+ + P+ G +++++L V KGK
Sbjct: 208 EVLRKK-YDEKCDVWSIGVILF-ILLAGYPPFGGQTDQEILRKVEKGK 253
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 22/211 (10%)
Query: 119 RSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFL-NEASVMK 177
+ K T +++G G+ G VY + D + E + + N ++ K E + NE VM+
Sbjct: 19 KKKYTRFEKIGQGASGTVYTAM--DVATGQE----VAIRQMNLQQQPKKELIINEILVMR 72
Query: 178 AFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYL-RSCRPDAETDVERSPPTLSRILQ 236
++V G+ V+ME + GG L + + +C + + I
Sbjct: 73 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQ------------IAA 120
Query: 237 MAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFL 296
+ E + +L + +HRD+ + N ++ D +VK+ DFG I + R G
Sbjct: 121 VCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVG-- 178
Query: 297 PVRWMAPESLKDGVFTSHSDVWSYGVVLWEM 327
WMAPE + + D+WS G++ EM
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEM 209
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 22/211 (10%)
Query: 119 RSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFL-NEASVMK 177
+ K T +++G G+ G VY + D + E + + N ++ K E + NE VM+
Sbjct: 19 KKKYTRFEKIGQGASGTVYTAM--DVATGQE----VAIRQMNLQQQPKKELIINEILVMR 72
Query: 178 AFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYL-RSCRPDAETDVERSPPTLSRILQ 236
++V G+ V+ME + GG L + + +C + + I
Sbjct: 73 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQ------------IAA 120
Query: 237 MAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFL 296
+ E + +L + +HRD+ + N ++ D +VK+ DFG I + R G
Sbjct: 121 VCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVG-- 178
Query: 297 PVRWMAPESLKDGVFTSHSDVWSYGVVLWEM 327
WMAPE + + D+WS G++ EM
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEM 209
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 22/211 (10%)
Query: 119 RSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFL-NEASVMK 177
+ K T +++G G+ G VY + D + E + + N ++ K E + NE VM+
Sbjct: 19 KKKYTRFEKIGQGASGTVYTAM--DVATGQE----VAIRQMNLQQQPKKELIINEILVMR 72
Query: 178 AFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYL-RSCRPDAETDVERSPPTLSRILQ 236
++V G+ V+ME + GG L + + +C + + I
Sbjct: 73 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQ------------IAA 120
Query: 237 MAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFL 296
+ E + +L + +HRD+ + N ++ D +VK+ DFG I + R G
Sbjct: 121 VCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVG-- 178
Query: 297 PVRWMAPESLKDGVFTSHSDVWSYGVVLWEM 327
WMAPE + + D+WS G++ EM
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEM 209
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 98/208 (47%), Gaps = 23/208 (11%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFL--NEASVMKAFDT 181
I + LG GSFG V L +++ + A+K + ++ E S +K
Sbjct: 13 IRETLGEGSFGKV--KLATHYKT--QQKVALKFISRQLLKKSDMHMRVEREISYLKLLRH 68
Query: 182 HHVVKLYGVVSEGNPTLVIMEL-MGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAE 240
H++KLY V++ PT ++M + GG+L +Y+ VE+ T + +
Sbjct: 69 PHIIKLYDVIT--TPTDIVMVIEYAGGELFDYI----------VEKKRMTEDEGRRFFQQ 116
Query: 241 VADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRW 300
+ + Y K VHRDL N ++ D+L VK+ DFG++ +I + K S G +
Sbjct: 117 IICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLS-NIMTDGNFLKTSCG--SPNY 173
Query: 301 MAPESLKDGVFTS-HSDVWSYGVVLWEM 327
APE + ++ DVWS G+VL+ M
Sbjct: 174 AAPEVINGKLYAGPEVDVWSCGIVLYVM 201
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 102/213 (47%), Gaps = 25/213 (11%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTH-HVVK 186
LG GSF + + + K + A+K+ S+R +A E + +K + H ++VK
Sbjct: 19 LGEGSFSICRKCVHKK----SNQAFAVKII----SKRMEANTQKEITALKLCEGHPNIVK 70
Query: 187 LYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMA 246
L+ V + T ++MEL+ GG+L ++ + +ET+ S I++ ++ ++
Sbjct: 71 LHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEA-------SYIMR---KLVSAVS 120
Query: 247 YLADKKFVHRDLAARNCMVADD---LTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAP 303
++ D VHRDL N + D+ L +K+ DFG R + + + + AP
Sbjct: 121 HMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFAR--LKPPDNQPLKTPCFTLHYAAP 178
Query: 304 ESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQ 336
E L + D+WS GV+L+ M + P+Q
Sbjct: 179 ELLNQNGYDESCDLWSLGVILYTMLS-GQVPFQ 210
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 97/232 (41%), Gaps = 22/232 (9%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG G F Y D + + K ++EK E ++ K+ D HVV
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMS--TEIAIHKSLDNPHVVGF 107
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDA--ETDVERSPPTLSRILQMAAEVADGM 245
+G + + V++E+ CR + E R T + G+
Sbjct: 108 HGFFEDDDFVYVVLEI------------CRRRSLLELHKRRKAVTEPEARYFMRQTIQGV 155
Query: 246 AYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPES 305
YL + + +HRDL N + DD+ VK+GDFG+ I E + RK + P ++APE
Sbjct: 156 QYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI-EFDGERKKTLCGTP-NYIAPEV 213
Query: 306 LKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSNEYKV 357
L + D+WS G +L+ + + P++ ++ +K NEY V
Sbjct: 214 LCKKGHSFEVDIWSLGCILYTL-LVGKPPFETSCLKETYIRIK---KNEYSV 261
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 96/232 (41%), Gaps = 22/232 (9%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG G F Y D + + K ++EK E ++ K+ D HVV
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMS--TEIAIHKSLDNPHVVGF 91
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDA--ETDVERSPPTLSRILQMAAEVADGM 245
+G + + V++E+ CR + E R T + G+
Sbjct: 92 HGFFEDDDFVYVVLEI------------CRRRSLLELHKRRKAVTEPEARYFMRQTIQGV 139
Query: 246 AYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPES 305
YL + + +HRDL N + DD+ VK+GDFG+ I E + RK P ++APE
Sbjct: 140 QYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI-EFDGERKKDLCGTP-NYIAPEV 197
Query: 306 LKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSNEYKV 357
L + D+WS G +L+ + + P++ ++ +K NEY V
Sbjct: 198 LCKKGHSFEVDIWSLGCILYTL-LVGKPPFETSCLKETYIRIK---KNEYSV 245
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 112/240 (46%), Gaps = 23/240 (9%)
Query: 115 WEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEAS 174
W + R + + +G+G+ +V + + + AIK N + E L E
Sbjct: 5 WSINRDDYELQEVIGSGATAVVQAA----YCAPKKEKVAIKRINLEKCQTSMDELLKEIQ 60
Query: 175 VMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETD---VERSPPTL 231
M ++V Y + ++M+L+ GG + + ++ E ++ S T+
Sbjct: 61 AMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDES--TI 118
Query: 232 SRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTR------DIYET 285
+ IL+ EV +G+ YL +HRD+ A N ++ +D +V++ DFG++ DI
Sbjct: 119 ATILR---EVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRN 175
Query: 286 EYYRKGSRGFLPVRWMAPESLKD-GVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVL 344
+ RK G P WMAPE ++ + +D+WS+G+ E+AT A+ PY +VL
Sbjct: 176 K-VRKTFVG-TPC-WMAPEVMEQVRGYDFKADIWSFGITAIELATGAA-PYHKYPPMKVL 231
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 99/234 (42%), Gaps = 28/234 (11%)
Query: 114 SWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
WE LD+ +G GSFG V L+K + + I + ++
Sbjct: 29 KWENPAQNTAHLDQFERIKTIGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIE 86
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
LNE +++A + +VKL + + ++ME M GGD+ ++LR + R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRR--------IGRF 138
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
+R AA++ YL ++RDL N ++ +KV DFG + + +
Sbjct: 139 SEPHARF--YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTW 196
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT-----LASQPYQ 336
G+ +L APE + + D W+ GV+++EMA A QP Q
Sbjct: 197 XLCGTPEYL-----APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 99/234 (42%), Gaps = 28/234 (11%)
Query: 114 SWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
WE LD+ +G GSFG V L+K + + I + ++
Sbjct: 29 KWENPAQNTAHLDQFERIKTIGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIE 86
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
LNE +++A + +VKL + + ++ME M GGD+ ++LR + R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRR--------IGRF 138
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
+R AA++ YL ++RDL N ++ +KV DFG + + +
Sbjct: 139 SEPHARF--YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTW 196
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT-----LASQPYQ 336
G+ +L APE + + D W+ GV+++EMA A QP Q
Sbjct: 197 XLCGTPEYL-----APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 101/227 (44%), Gaps = 42/227 (18%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEH-----PCAIKVANE---NASEREKAEFLNEASV 175
+L +G G+F V LA H AIK+ ++ N + +K E +
Sbjct: 19 LLKTIGKGNFAKV---------KLARHILTGREVAIKIIDKTQLNPTSLQK--LFREVRI 67
Query: 176 MKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRIL 235
MK + ++VKL+ V+ +IME GG++ +YL + E + S+
Sbjct: 68 MKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEAR------SKFR 121
Query: 236 QMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSR-- 293
Q+ + V Y K+ VHRDL A N ++ D+ +K+ DFG + E+ G
Sbjct: 122 QIVSAVQ----YCHQKRIVHRDLKAENLLLDADMNIKIADFG-----FSNEFTVGGKLDA 172
Query: 294 --GFLPVRWMAPESLKDGVFTS-HSDVWSYGVVLWEMATLASQPYQG 337
G P + APE + + DVWS GV+L+ + + S P+ G
Sbjct: 173 FCGAPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDG 216
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 101/227 (44%), Gaps = 42/227 (18%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEH-----PCAIKVANE---NASEREKAEFLNEASV 175
+L +G G+F V LA H AIK+ ++ N + +K E +
Sbjct: 16 LLKTIGKGNFAKV---------KLARHILTGREVAIKIIDKTQLNPTSLQK--LFREVRI 64
Query: 176 MKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRIL 235
MK + ++VKL+ V+ +IME GG++ +YL + E + S+
Sbjct: 65 MKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEAR------SKFR 118
Query: 236 QMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSR-- 293
Q+ + V Y K+ VHRDL A N ++ D+ +K+ DFG + E+ G
Sbjct: 119 QIVSAVQ----YCHQKRIVHRDLKAENLLLDADMNIKIADFG-----FSNEFTVGGKLDT 169
Query: 294 --GFLPVRWMAPESLKDGVFTS-HSDVWSYGVVLWEMATLASQPYQG 337
G P + APE + + DVWS GV+L+ + + S P+ G
Sbjct: 170 FCGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDG 213
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 111/244 (45%), Gaps = 30/244 (12%)
Query: 126 DELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVV 185
+ LG G FG V R + +D AIK + S + + + E +MK + +VV
Sbjct: 20 ERLGTGGFGYVLRWIHQD----TGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 186 KLYGV------VSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAA 239
V ++ + L+ ME GGDL+ YL + ++ P I + +
Sbjct: 76 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQF--ENCCGLKEGP-----IRTLLS 128
Query: 240 EVADGMAYLADKKFVHRDLAARNCMVA---DDLTVKVGDFGMTRDIYETEYYRKGSRGFL 296
+++ + YL + + +HRDL N ++ L K+ D G +++ + E +
Sbjct: 129 DISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELC---TEFVG 185
Query: 297 PVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGK---SSN 353
++++APE L+ +T D WS+G + +E T +P+ L N Q + W GK SN
Sbjct: 186 TLQYLAPELLEQKKYTVTVDYWSFGTLAFECIT-GFRPF--LPNWQPVQW-HGKVREKSN 241
Query: 354 EYKV 357
E+ V
Sbjct: 242 EHIV 245
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 112/240 (46%), Gaps = 23/240 (9%)
Query: 115 WEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEAS 174
W + R + + +G+G+ +V + + + AIK N + E L E
Sbjct: 10 WSINRDDYELQEVIGSGATAVVQAA----YCAPKKEKVAIKRINLEKCQTSMDELLKEIQ 65
Query: 175 VMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETD---VERSPPTL 231
M ++V Y + ++M+L+ GG + + ++ E ++ S T+
Sbjct: 66 AMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDES--TI 123
Query: 232 SRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTR------DIYET 285
+ IL+ EV +G+ YL +HRD+ A N ++ +D +V++ DFG++ DI
Sbjct: 124 ATILR---EVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRN 180
Query: 286 EYYRKGSRGFLPVRWMAPESLKD-GVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVL 344
+ RK G P WMAPE ++ + +D+WS+G+ E+AT A+ PY +VL
Sbjct: 181 K-VRKTFVG-TPC-WMAPEVMEQVRGYDFKADIWSFGITAIELATGAA-PYHKYPPMKVL 236
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 22/211 (10%)
Query: 119 RSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFL-NEASVMK 177
+ K T +++G G+ G VY + D + E + + N ++ K E + NE VM+
Sbjct: 20 KKKYTRFEKIGQGASGTVYTAM--DVATGQE----VAIRQMNLQQQPKKELIINEILVMR 73
Query: 178 AFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYL-RSCRPDAETDVERSPPTLSRILQ 236
++V G+ V+ME + GG L + + +C + + I
Sbjct: 74 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQ------------IAA 121
Query: 237 MAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFL 296
+ E + +L + +HR++ + N ++ D +VK+ DFG I + R G
Sbjct: 122 VCRECLQALEFLHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVG-- 179
Query: 297 PVRWMAPESLKDGVFTSHSDVWSYGVVLWEM 327
WMAPE + + D+WS G++ EM
Sbjct: 180 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEM 210
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 111/244 (45%), Gaps = 30/244 (12%)
Query: 126 DELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVV 185
+ LG G FG V R + +D AIK + S + + + E +MK + +VV
Sbjct: 21 ERLGTGGFGYVLRWIHQD----TGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 186 KLYGV------VSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAA 239
V ++ + L+ ME GGDL+ YL + ++ P I + +
Sbjct: 77 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQF--ENCCGLKEGP-----IRTLLS 129
Query: 240 EVADGMAYLADKKFVHRDLAARNCMVA---DDLTVKVGDFGMTRDIYETEYYRKGSRGFL 296
+++ + YL + + +HRDL N ++ L K+ D G +++ + E +
Sbjct: 130 DISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELC---TEFVG 186
Query: 297 PVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGK---SSN 353
++++APE L+ +T D WS+G + +E T +P+ L N Q + W GK SN
Sbjct: 187 TLQYLAPELLEQKKYTVTVDYWSFGTLAFECIT-GFRPF--LPNWQPVQW-HGKVREKSN 242
Query: 354 EYKV 357
E+ V
Sbjct: 243 EHIV 246
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 102/223 (45%), Gaps = 26/223 (11%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASER---EKAEFLNEASVMKAFDTHHV 184
LG G FG V++ E +K+A + R +K E NE SVM D ++
Sbjct: 97 LGGGRFGQVHK--------CEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANL 148
Query: 185 VKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADG 244
++LY N +++ME + GG+L + + D + L IL M ++ +G
Sbjct: 149 IQLYDAFESKNDIVLVMEYVDGGELFDRI--------IDESYNLTELDTILFM-KQICEG 199
Query: 245 MAYLADKKFVHRDLAARN--CMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMA 302
+ ++ +H DL N C+ D +K+ DFG+ R E K F ++A
Sbjct: 200 IRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE---KLKVNFGTPEFLA 256
Query: 303 PESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLN 345
PE + + +D+WS GV+ + + + S P+ G ++ + LN
Sbjct: 257 PEVVNYDFVSFPTDMWSVGVIAYMLLSGLS-PFLGDNDAETLN 298
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 104/232 (44%), Gaps = 34/232 (14%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHV 184
LD+LG G++ VY+G K L ++ A+K E + E S++K ++
Sbjct: 7 LDKLGEGTYATVYKGKSK----LTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANI 62
Query: 185 VKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADG 244
V L+ ++ ++ E + DLK YL C + + + ++ G
Sbjct: 63 VTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCG---------NIINMHNVKLFLFQLLRG 112
Query: 245 MAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTR------DIYETEYYRKGSRGFLPV 298
+AY +K +HRDL +N ++ + +K+ DFG+ R Y+ E +
Sbjct: 113 LAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNE---------VVT 163
Query: 299 RWMAPESLKDGV--FTSHSDVWSYGVVLWEMATLASQP-YQGLSNEQVLNWV 347
W P + G +++ D+W G + +EMAT +P + G + E+ L+++
Sbjct: 164 LWYRPPDILLGSTDYSTQIDMWGVGCIFYEMAT--GRPLFPGSTVEEQLHFI 213
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 96/232 (41%), Gaps = 22/232 (9%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG G F Y D + + K ++EK E ++ K+ D HVV
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMS--TEIAIHKSLDNPHVVGF 107
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDA--ETDVERSPPTLSRILQMAAEVADGM 245
+G + + V++E+ CR + E R T + G+
Sbjct: 108 HGFFEDDDFVYVVLEI------------CRRRSLLELHKRRKAVTEPEARYFMRQTIQGV 155
Query: 246 AYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPES 305
YL + + +HRDL N + DD+ VK+GDFG+ I E + RK P ++APE
Sbjct: 156 QYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI-EFDGERKKXLCGTP-NYIAPEV 213
Query: 306 LKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSNEYKV 357
L + D+WS G +L+ + + P++ ++ +K NEY V
Sbjct: 214 LCKKGHSFEVDIWSLGCILYTL-LVGKPPFETSCLKETYIRIK---KNEYSV 261
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 96/232 (41%), Gaps = 22/232 (9%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG G F Y D + + K ++EK E ++ K+ D HVV
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMS--TEIAIHKSLDNPHVVGF 107
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDA--ETDVERSPPTLSRILQMAAEVADGM 245
+G + + V++E+ CR + E R T + G+
Sbjct: 108 HGFFEDDDFVYVVLEI------------CRRRSLLELHKRRKAVTEPEARYFMRQTIQGV 155
Query: 246 AYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPES 305
YL + + +HRDL N + DD+ VK+GDFG+ I E + RK P ++APE
Sbjct: 156 QYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI-EFDGERKKDLCGTP-NYIAPEV 213
Query: 306 LKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSNEYKV 357
L + D+WS G +L+ + + P++ ++ +K NEY V
Sbjct: 214 LCKKGHSFEVDIWSLGCILYTL-LVGKPPFETSCLKETYIRIK---KNEYSV 261
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 98/211 (46%), Gaps = 29/211 (13%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANE----NASEREKAEFLNEASVMKAFD 180
+ ELG G+ G+V++ ++ P + +A + + + + E V+ +
Sbjct: 30 ISELGAGNGGVVFK--------VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 81
Query: 181 THHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAE 240
+ ++V YG + ME M GG L L+ R P + + +++
Sbjct: 82 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG--------RIPEQI--LGKVSIA 131
Query: 241 VADGMAYLADK-KFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVR 299
V G+ YL +K K +HRD+ N +V +K+ DFG++ + ++ + F+ R
Sbjct: 132 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-----ANSFVGTR 186
Query: 300 -WMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
+M+PE L+ ++ SD+WS G+ L EMA
Sbjct: 187 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 217
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 110/238 (46%), Gaps = 31/238 (13%)
Query: 127 ELGNGSFGLVYRGLIKDFRSLAEHPCAI---------KVANENAS-EREKAEFLNEASVM 176
+LG+G++G V L K+ +E + + +++N + E+ E NE S++
Sbjct: 43 KLGSGAYGEVL--LCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLL 100
Query: 177 KAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQ 236
K+ D +++KL+ V + ++ E GG+L E + R
Sbjct: 101 KSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGEL----------FEQIINRHKFDECDAAN 150
Query: 237 MAAEVADGMAYLADKKFVHRDLAARNCMVADD---LTVKVGDFGMTRDIYETEYYRKGSR 293
+ ++ G+ YL VHRD+ N ++ + L +K+ DFG++ + +Y +
Sbjct: 151 IMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSS-FFSKDYKLRDRL 209
Query: 294 GFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV-KGK 350
G ++APE LK + DVWS GV+++ + P+ G +++ ++ V KGK
Sbjct: 210 G--TAYYIAPEVLKKK-YNEKCDVWSCGVIMY-ILLCGYPPFGGQNDQDIIKKVEKGK 263
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 106/223 (47%), Gaps = 23/223 (10%)
Query: 127 ELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMK-AFDTHHVV 185
ELG G F +V + + K S + A + + +AE L+E +V++ A V+
Sbjct: 36 ELGRGKFAVVRQCISK---STGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVI 92
Query: 186 KLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
L+ V + ++I+E GG++ C P+ V + ++++ ++ +G+
Sbjct: 93 NLHEVYENTSEIILILEYAAGGEI---FSLCLPELAEMVSEND-----VIRLIKQILEGV 144
Query: 246 AYLADKKFVHRDLAARNCMVADDL---TVKVGDFGMTRDIYETEYYRK--GSRGFLPVRW 300
YL VH DL +N +++ +K+ DFGM+R I R+ G+ +L
Sbjct: 145 YYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYL---- 200
Query: 301 MAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
APE L T+ +D+W+ G++ + + T S P+ G N++
Sbjct: 201 -APEILNYDPITTATDMWNIGIIAYMLLTHTS-PFVGEDNQET 241
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 99/234 (42%), Gaps = 28/234 (11%)
Query: 114 SWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
WE LD+ LG GSFG V L+K + + I + +E
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKEIE 86
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
LNE +++A + +VKL + + ++ME GG++ ++LR + R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR--------IGRF 138
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
+R AA++ YL ++RDL N M+ +KV DFG+ + + +
Sbjct: 139 SEPHARF--YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTW 196
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT-----LASQPYQ 336
G+ +L APE + + D W+ GV+++EMA A QP Q
Sbjct: 197 XLCGTPEYL-----APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 98/211 (46%), Gaps = 29/211 (13%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANE----NASEREKAEFLNEASVMKAFD 180
+ ELG G+ G+V++ ++ P + +A + + + + E V+ +
Sbjct: 11 ISELGAGNGGVVFK--------VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 62
Query: 181 THHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAE 240
+ ++V YG + ME M GG L L+ R P + + +++
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG--------RIPEQI--LGKVSIA 112
Query: 241 VADGMAYLADK-KFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVR 299
V G+ YL +K K +HRD+ N +V +K+ DFG++ + ++ + F+ R
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-----ANSFVGTR 167
Query: 300 -WMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
+M+PE L+ ++ SD+WS G+ L EMA
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 198
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 98/211 (46%), Gaps = 29/211 (13%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANE----NASEREKAEFLNEASVMKAFD 180
+ ELG G+ G+V++ ++ P + +A + + + + E V+ +
Sbjct: 11 ISELGAGNGGVVFK--------VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 62
Query: 181 THHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAE 240
+ ++V YG + ME M GG L L+ R P + + +++
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG--------RIPEQI--LGKVSIA 112
Query: 241 VADGMAYLADK-KFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVR 299
V G+ YL +K K +HRD+ N +V +K+ DFG++ + ++ + F+ R
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-----ANSFVGTR 167
Query: 300 -WMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
+M+PE L+ ++ SD+WS G+ L EMA
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 198
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 98/211 (46%), Gaps = 29/211 (13%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANE----NASEREKAEFLNEASVMKAFD 180
+ ELG G+ G+V++ ++ P + +A + + + + E V+ +
Sbjct: 11 ISELGAGNGGVVFK--------VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 62
Query: 181 THHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAE 240
+ ++V YG + ME M GG L L+ R P + + +++
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG--------RIPEQI--LGKVSIA 112
Query: 241 VADGMAYLADK-KFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVR 299
V G+ YL +K K +HRD+ N +V +K+ DFG++ + ++ + F+ R
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-----ANSFVGTR 167
Query: 300 -WMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
+M+PE L+ ++ SD+WS G+ L EMA
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 198
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 107/232 (46%), Gaps = 29/232 (12%)
Query: 126 DELGNGSFGLV----YRGLIKDFRSLAEHPCAIKVANENASER--EKAEFLNEASVMKAF 179
+ELG+G F +V +G K++ + IK ++S R + E E ++++
Sbjct: 11 EELGSGQFAIVRKCRQKGTGKEYAA-----KFIKKRRLSSSRRGVSREEIEREVNILREI 65
Query: 180 DTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAA 239
+++ L+ + ++I+EL+ GG+L ++L E+ T Q
Sbjct: 66 RHPNIITLHDIFENKTDVVLILELVSGGELFDFL----------AEKESLTEDEATQFLK 115
Query: 240 EVADGMAYLADKKFVHRDLAARNCMVAD----DLTVKVGDFGMTRDIYETEYYRKGSRGF 295
++ DG+ YL K+ H DL N M+ D + +K+ DFG+ I ++ F
Sbjct: 116 QILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN---IF 172
Query: 296 LPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV 347
++APE + +D+WS GV+ + + + AS P+ G + ++ L +
Sbjct: 173 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS-PFLGETKQETLTNI 223
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 107/232 (46%), Gaps = 29/232 (12%)
Query: 126 DELGNGSFGLV----YRGLIKDFRSLAEHPCAIKVANENASER--EKAEFLNEASVMKAF 179
+ELG+G F +V +G K++ + IK ++S R + E E ++++
Sbjct: 18 EELGSGQFAIVRKCRQKGTGKEYAA-----KFIKKRRLSSSRRGVSREEIEREVNILREI 72
Query: 180 DTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAA 239
+++ L+ + ++I+EL+ GG+L ++L E+ T Q
Sbjct: 73 RHPNIITLHDIFENKTDVVLILELVSGGELFDFL----------AEKESLTEDEATQFLK 122
Query: 240 EVADGMAYLADKKFVHRDLAARNCMVAD----DLTVKVGDFGMTRDIYETEYYRKGSRGF 295
++ DG+ YL K+ H DL N M+ D + +K+ DFG+ I ++ F
Sbjct: 123 QILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN---IF 179
Query: 296 LPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV 347
++APE + +D+WS GV+ + + + AS P+ G + ++ L +
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS-PFLGETKQETLTNI 230
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 98/211 (46%), Gaps = 29/211 (13%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANE----NASEREKAEFLNEASVMKAFD 180
+ ELG G+ G+V++ ++ P + +A + + + + E V+ +
Sbjct: 38 ISELGAGNGGVVFK--------VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 89
Query: 181 THHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAE 240
+ ++V YG + ME M GG L L+ R P + + +++
Sbjct: 90 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG--------RIPEQI--LGKVSIA 139
Query: 241 VADGMAYLADK-KFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVR 299
V G+ YL +K K +HRD+ N +V +K+ DFG++ + ++ + F+ R
Sbjct: 140 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-----ANSFVGTR 194
Query: 300 -WMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
+M+PE L+ ++ SD+WS G+ L EMA
Sbjct: 195 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 225
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHH 183
++ LG G++G V + + E A+K+ + + E + K + +
Sbjct: 10 LVQTLGEGAYGEVQLAV----NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
VVK YG EGN + +E GG+L + + E D+ P R ++
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRI-------EPDIGMPEPDAQRFFH---QLMA 115
Query: 244 GMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSR--GFLPVRWM 301
G+ YL HRD+ N ++ + +K+ DFG+ R ++ G LP ++
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP--YV 173
Query: 302 APESLKDGVFTSHS-DVWSYGVVLWEM 327
APE LK F + DVWS G+VL M
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAM 200
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 98/211 (46%), Gaps = 29/211 (13%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANE----NASEREKAEFLNEASVMKAFD 180
+ ELG G+ G+V++ ++ P + +A + + + + E V+ +
Sbjct: 11 ISELGAGNGGVVFK--------VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 62
Query: 181 THHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAE 240
+ ++V YG + ME M GG L L+ R P + + +++
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG--------RIPEQI--LGKVSIA 112
Query: 241 VADGMAYLADK-KFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVR 299
V G+ YL +K K +HRD+ N +V +K+ DFG++ + ++ + F+ R
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-----ANSFVGTR 167
Query: 300 -WMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
+M+PE L+ ++ SD+WS G+ L EMA
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 198
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHH 183
++ LG G++G V + + E A+K+ + + E + K + +
Sbjct: 9 LVQTLGEGAYGEVQLAV----NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 64
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
VVK YG EGN + +E GG+L + + E D+ P R ++
Sbjct: 65 VVKFYGHRREGNIQYLFLEYCSGGELFDRI-------EPDIGMPEPDAQRFFH---QLMA 114
Query: 244 GMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSR--GFLPVRWM 301
G+ YL HRD+ N ++ + +K+ DFG+ R ++ G LP ++
Sbjct: 115 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP--YV 172
Query: 302 APESLKDGVFTSHS-DVWSYGVVLWEM 327
APE LK F + DVWS G+VL M
Sbjct: 173 APELLKRREFHAEPVDVWSCGIVLTAM 199
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 98/211 (46%), Gaps = 29/211 (13%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANE----NASEREKAEFLNEASVMKAFD 180
+ ELG G+ G+V++ ++ P + +A + + + + E V+ +
Sbjct: 11 ISELGAGNGGVVFK--------VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 62
Query: 181 THHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAE 240
+ ++V YG + ME M GG L L+ R P + + +++
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG--------RIPEQI--LGKVSIA 112
Query: 241 VADGMAYLADK-KFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVR 299
V G+ YL +K K +HRD+ N +V +K+ DFG++ + ++ + F+ R
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-----ANSFVGTR 167
Query: 300 -WMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
+M+PE L+ ++ SD+WS G+ L EMA
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 198
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 91/193 (47%), Gaps = 14/193 (7%)
Query: 162 SEREKAEFLNEASVMKAFDTHHVVKLYG-VVSEGNPTL-VIMELMGGGDLKNYLRSCRPD 219
+E EK ++E ++++ ++V+ Y ++ N TL ++ME GGDL + + +
Sbjct: 45 TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKE 104
Query: 220 A----ETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGD 275
E V R L+ L+ +DG +HRDL N + VK+GD
Sbjct: 105 RQYLDEEFVLRVMTQLTLALKECHRRSDG-----GHTVLHRDLKPANVFLDGKQNVKLGD 159
Query: 276 FGMTRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPY 335
FG+ R + E + K G P +M+PE + + SD+WS G +L+E+ L P+
Sbjct: 160 FGLARILNHDEDFAKEFVG-TPY-YMSPEQMNRMSYNEKSDIWSLGCLLYELCALMP-PF 216
Query: 336 QGLSNEQVLNWVK 348
S +++ ++
Sbjct: 217 TAFSQKELAGKIR 229
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 99/234 (42%), Gaps = 28/234 (11%)
Query: 114 SWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
WE LD+ LG GSFG V L+K S + I + ++
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIE 86
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
LNE +++A + +VKL + + ++ME + GG++ ++LR + R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--------IGRF 138
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
+R AA++ YL ++RDL N ++ ++V DFG + + +
Sbjct: 139 SEPHARF--YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT-----LASQPYQ 336
G+ +L APE + + D W+ GV+++EMA A QP Q
Sbjct: 197 XLXGTPEYL-----APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 104/234 (44%), Gaps = 24/234 (10%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHH 183
++ LG G++G V + + E A+K+ + + E + K + +
Sbjct: 10 LVQTLGEGAYGEVQLAV----NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
VVK YG EGN + +E GG+L + + E D+ P R ++
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRI-------EPDIGMPEPDAQRFFH---QLMA 115
Query: 244 GMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSR--GFLPVRWM 301
G+ YL HRD+ N ++ + +K+ DFG+ R ++ G LP ++
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP--YV 173
Query: 302 APESLKDGVFTSHS-DVWSYGVVLWEMATLASQ-PYQGLSN--EQVLNWVKGKS 351
APE LK F + DVWS G+VL A LA + P+ S+ ++ +W + K+
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVL--TAMLAGELPWDQPSDSCQEYSDWKEKKT 225
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 104/234 (44%), Gaps = 24/234 (10%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHH 183
++ LG G++G V + + E A+K+ + + E + K + +
Sbjct: 10 LVQTLGEGAYGEVQLAV----NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
VVK YG EGN + +E GG+L + + E D+ P R ++
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRI-------EPDIGMPEPDAQRFFH---QLMA 115
Query: 244 GMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSR--GFLPVRWM 301
G+ YL HRD+ N ++ + +K+ DFG+ R ++ G LP ++
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP--YV 173
Query: 302 APESLKDGVFTSHS-DVWSYGVVLWEMATLASQ-PYQGLSN--EQVLNWVKGKS 351
APE LK F + DVWS G+VL A LA + P+ S+ ++ +W + K+
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVL--TAMLAGELPWDQPSDSCQEYSDWKEKKT 225
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 97/226 (42%), Gaps = 26/226 (11%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREK--AEFLNEASVMKAFDTHHVV 185
LG GSF VYR + + E AIK+ ++ A + NE + ++
Sbjct: 19 LGKGSFAGVYRA--ESIHTGLE--VAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSIL 74
Query: 186 KLYGVVSEGNPTLVIMELMGGGDLKNYLRS-CRPDAETDVERSPPTLSRILQMAAEVADG 244
+LY + N +++E+ G++ YL++ +P +E + ++ G
Sbjct: 75 ELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEAR----------HFMHQIITG 124
Query: 245 MAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI---YETEYYRKGSRGFLPVRWM 301
M YL +HRDL N ++ ++ +K+ DFG+ + +E Y G+ ++
Sbjct: 125 MLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPN-----YI 179
Query: 302 APESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV 347
+PE SDVWS G + + + + P+ + + LN V
Sbjct: 180 SPEIATRSAHGLESDVWSLGCMFYTL-LIGRPPFDTDTVKNTLNKV 224
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHH 183
++ LG G++G V + + E A+K+ + + E + K + +
Sbjct: 10 LVQTLGEGAYGEVQLAV----NRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHEN 65
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
VVK YG EGN + +E GG+L + + E D+ P R ++
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRI-------EPDIGMPEPDAQRFFH---QLMA 115
Query: 244 GMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSR--GFLPVRWM 301
G+ YL HRD+ N ++ + +K+ DFG+ R ++ G LP ++
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP--YV 173
Query: 302 APESLKDGVFTSHS-DVWSYGVVLWEM 327
APE LK F + DVWS G+VL M
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAM 200
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 100/234 (42%), Gaps = 28/234 (11%)
Query: 114 SWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
WE LD+ LG GSFG V L+K S + I + ++
Sbjct: 16 KWETPSQNTAQLDQFDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIE 73
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
LNE +++A + +VKL + + ++ME + GG++ ++LR + R
Sbjct: 74 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--------IGRF 125
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
+R AA++ YL ++RDL N ++ + ++V DFG + + +
Sbjct: 126 SEPHARF--YAAQIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTW 183
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT-----LASQPYQ 336
G+ +L APE + + D W+ GV+++EMA A QP Q
Sbjct: 184 XLCGTPEYL-----APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 232
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHH 183
++ LG G++G V + + E A+K+ + + E + K + +
Sbjct: 10 LVQTLGEGAYGEVQLAV----NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
VVK YG EGN + +E GG+L + + E D+ P R ++
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRI-------EPDIGMPEPDAQRFFH---QLMA 115
Query: 244 GMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSR--GFLPVRWM 301
G+ YL HRD+ N ++ + +K+ DFG+ R ++ G LP ++
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP--YV 173
Query: 302 APESLKDGVFTSHS-DVWSYGVVLWEM 327
APE LK F + DVWS G+VL M
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAM 200
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 98/219 (44%), Gaps = 35/219 (15%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIK-VANENASEREKAEFLNEASVMKAFDTH 182
I++ +GNG++G+V R L AIK + N L E ++K F
Sbjct: 58 IIETIGNGAYGVVSSAR----RRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 113
Query: 183 HVVKLYGVVSEGNP------TLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQ 236
+++ + ++ P V+++LM DL + S +P TL +
Sbjct: 114 NIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPL----------TLEHVRY 162
Query: 237 MAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI----YETEYYRKGS 292
++ G+ Y+ + +HRDL N +V ++ +K+GDFGM R + E +Y+
Sbjct: 163 FLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMT-- 220
Query: 293 RGFLPVRWM-APE---SLKDGVFTSHSDVWSYGVVLWEM 327
++ RW APE SL + +T D+WS G + EM
Sbjct: 221 -EYVATRWYRAPELMLSLHE--YTQAIDLWSVGCIFGEM 256
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 104/234 (44%), Gaps = 24/234 (10%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHH 183
++ LG G++G V + + E A+K+ + + E + K + +
Sbjct: 11 LVQTLGEGAYGEVQLAV----NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
VVK YG EGN + +E GG+L + + E D+ P R ++
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRI-------EPDIGMPEPDAQRFFH---QLMA 116
Query: 244 GMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSR--GFLPVRWM 301
G+ YL HRD+ N ++ + +K+ DFG+ R ++ G LP ++
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP--YV 174
Query: 302 APESLKDGVFTSHS-DVWSYGVVLWEMATLASQ-PYQGLSN--EQVLNWVKGKS 351
APE LK F + DVWS G+VL A LA + P+ S+ ++ +W + K+
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVL--TAMLAGELPWDQPSDSCQEYSDWKEKKT 226
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHH 183
++ LG G++G V + + E A+K+ + + E + K + +
Sbjct: 10 LVQTLGEGAYGEVQLAV----NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
VVK YG EGN + +E GG+L + + E D+ P R ++
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRI-------EPDIGMPEPDAQRFFH---QLMA 115
Query: 244 GMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSR--GFLPVRWM 301
G+ YL HRD+ N ++ + +K+ DFG+ R ++ G LP ++
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLP--YV 173
Query: 302 APESLKDGVFTSHS-DVWSYGVVLWEM 327
APE LK F + DVWS G+VL M
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAM 200
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 98/219 (44%), Gaps = 35/219 (15%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIK-VANENASEREKAEFLNEASVMKAFDTH 182
I++ +GNG++G+V R L AIK + N L E ++K F
Sbjct: 59 IIETIGNGAYGVVSSAR----RRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 114
Query: 183 HVVKLYGVVSEGNP------TLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQ 236
+++ + ++ P V+++LM DL + S +P TL +
Sbjct: 115 NIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPL----------TLEHVRY 163
Query: 237 MAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI----YETEYYRKGS 292
++ G+ Y+ + +HRDL N +V ++ +K+GDFGM R + E +Y+
Sbjct: 164 FLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMT-- 221
Query: 293 RGFLPVRWM-APE---SLKDGVFTSHSDVWSYGVVLWEM 327
++ RW APE SL + +T D+WS G + EM
Sbjct: 222 -EYVATRWYRAPELMLSLHE--YTQAIDLWSVGCIFGEM 257
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHH 183
++ LG G++G V + + E A+K+ + + E + K + +
Sbjct: 10 LVQTLGEGAYGEVQLAV----NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
VVK YG EGN + +E GG+L + + E D+ P R ++
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRI-------EPDIGMPEPDAQRFFH---QLMA 115
Query: 244 GMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSR--GFLPVRWM 301
G+ YL HRD+ N ++ + +K+ DFG+ R ++ G LP ++
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP--YV 173
Query: 302 APESLKDGVFTSHS-DVWSYGVVLWEM 327
APE LK F + DVWS G+VL M
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAM 200
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHH 183
++ LG G++G V + + E A+K+ + + E + K + +
Sbjct: 11 LVQTLGEGAYGEVQLAV----NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
VVK YG EGN + +E GG+L + + E D+ P R ++
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRI-------EPDIGMPEPDAQRFFH---QLMA 116
Query: 244 GMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSR--GFLPVRWM 301
G+ YL HRD+ N ++ + +K+ DFG+ R ++ G LP ++
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP--YV 174
Query: 302 APESLKDGVFTSHS-DVWSYGVVLWEM 327
APE LK F + DVWS G+VL M
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAM 201
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHH 183
++ LG G++G V + + E A+K+ + + E + K + +
Sbjct: 11 LVQTLGEGAYGEVQLAV----NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
VVK YG EGN + +E GG+L + + E D+ P R ++
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRI-------EPDIGMPEPDAQRFFH---QLMA 116
Query: 244 GMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSR--GFLPVRWM 301
G+ YL HRD+ N ++ + +K+ DFG+ R ++ G LP ++
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP--YV 174
Query: 302 APESLKDGVFTSHS-DVWSYGVVLWEM 327
APE LK F + DVWS G+VL M
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAM 201
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHH 183
++ LG G++G V + + E A+K+ + + E + K + +
Sbjct: 11 LVQTLGEGAYGEVQLAV----NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
VVK YG EGN + +E GG+L + + E D+ P R ++
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRI-------EPDIGMPEPDAQRFFH---QLMA 116
Query: 244 GMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSR--GFLPVRWM 301
G+ YL HRD+ N ++ + +K+ DFG+ R ++ G LP ++
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP--YV 174
Query: 302 APESLKDGVFTSHS-DVWSYGVVLWEM 327
APE LK F + DVWS G+VL M
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAM 201
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHH 183
++ LG G++G V + + E A+K+ + + E + K + +
Sbjct: 11 LVQTLGEGAYGEVQLAV----NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
VVK YG EGN + +E GG+L + + E D+ P R ++
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRI-------EPDIGMPEPDAQRFFH---QLMA 116
Query: 244 GMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSR--GFLPVRWM 301
G+ YL HRD+ N ++ + +K+ DFG+ R ++ G LP ++
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP--YV 174
Query: 302 APESLKDGVFTSHS-DVWSYGVVLWEM 327
APE LK F + DVWS G+VL M
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAM 201
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 98/211 (46%), Gaps = 29/211 (13%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANE----NASEREKAEFLNEASVMKAFD 180
+ ELG G+ G+V++ ++ P + +A + + + + E V+ +
Sbjct: 73 ISELGAGNGGVVFK--------VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 124
Query: 181 THHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAE 240
+ ++V YG + ME M GG L L+ R P + + +++
Sbjct: 125 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG--------RIPEQI--LGKVSIA 174
Query: 241 VADGMAYLADK-KFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVR 299
V G+ YL +K K +HRD+ N +V +K+ DFG++ + ++ + F+ R
Sbjct: 175 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-----ANSFVGTR 229
Query: 300 -WMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
+M+PE L+ ++ SD+WS G+ L EMA
Sbjct: 230 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 260
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 99/234 (42%), Gaps = 28/234 (11%)
Query: 114 SWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
WE LD+ LG GSFG V L+K S + I + ++
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIE 86
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
LNE +++A + +VKL + + ++ME + GG++ ++LR + R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--------IGRF 138
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
+R AA++ YL ++RDL N ++ ++V DFG + + +
Sbjct: 139 SEPHARF--YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT-----LASQPYQ 336
G+ +L APE + + D W+ GV+++EMA A QP Q
Sbjct: 197 XLAGTPEYL-----APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHH 183
++ LG G++G V + + + E A+K+ + + E + K + +
Sbjct: 10 LVQTLGEGAYGEVQLAVNR----VTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
VVK YG EGN + +E GG+L + + E D+ P R ++
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRI-------EPDIGMPEPDAQRFFH---QLMA 115
Query: 244 GMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSR--GFLPVRWM 301
G+ YL HRD+ N ++ + +K+ DFG+ R ++ G LP ++
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP--YV 173
Query: 302 APESLKDGVFTSHS-DVWSYGVVLWEM 327
APE LK F + DVWS G+VL M
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAM 200
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHH 183
++ LG G++G V + + + E A+K+ + + E + K + +
Sbjct: 11 LVQTLGEGAYGEVQLAVNR----VTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
VVK YG EGN + +E GG+L + + E D+ P R ++
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRI-------EPDIGMPEPDAQRFFH---QLMA 116
Query: 244 GMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSR--GFLPVRWM 301
G+ YL HRD+ N ++ + +K+ DFG+ R ++ G LP ++
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP--YV 174
Query: 302 APESLKDGVFTSHS-DVWSYGVVLWEM 327
APE LK F + DVWS G+VL M
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAM 201
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHH 183
++ LG G++G V + + E A+K+ + + E + K + +
Sbjct: 10 LVQTLGEGAYGEVQLAV----NRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHEN 65
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
VVK YG EGN + +E GG+L + + E D+ P R ++
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRI-------EPDIGMPEPDAQRFFH---QLMA 115
Query: 244 GMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSR--GFLPVRWM 301
G+ YL HRD+ N ++ + +K+ DFG+ R ++ G LP ++
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLP--YV 173
Query: 302 APESLKDGVFTSHS-DVWSYGVVLWEM 327
APE LK F + DVWS G+VL M
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAM 200
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 20/232 (8%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHH 183
++ LG G++G V + + E A+K+ + + E + K + +
Sbjct: 10 LVQTLGEGAYGEVQLAV----NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
VVK YG EGN + +E GG+L + + E D+ P R ++
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRI-------EPDIGMPEPDAQRFFH---QLMA 115
Query: 244 GMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAP 303
G+ YL HRD+ N ++ + +K+ DFG+ R ++ + ++AP
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 304 ESLKDGVFTSHS-DVWSYGVVLWEMATLASQ-PYQGLSN--EQVLNWVKGKS 351
E LK F + DVWS G+VL A LA + P+ S+ ++ +W + K+
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVL--TAMLAGELPWDQPSDSCQEYSDWKEKKT 225
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHH 183
++ LG G++G V + + E A+K+ + + E + K + +
Sbjct: 11 LVQTLGEGAYGEVQLAV----NRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHEN 66
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
VVK YG EGN + +E GG+L + + E D+ P R ++
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRI-------EPDIGMPEPDAQRFFH---QLMA 116
Query: 244 GMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSR--GFLPVRWM 301
G+ YL HRD+ N ++ + +K+ DFG+ R ++ G LP ++
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLP--YV 174
Query: 302 APESLKDGVFTSHS-DVWSYGVVLWEM 327
APE LK F + DVWS G+VL M
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAM 201
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHH 183
++ LG G++G V + + E A+K+ + + E + K + +
Sbjct: 10 LVQTLGEGAYGEVQLAV----NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
VVK YG EGN + +E GG+L + + E D+ P R ++
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRI-------EPDIGMPEPDAQRFFH---QLMA 115
Query: 244 GMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSR--GFLPVRWM 301
G+ YL HRD+ N ++ + +K+ DFG+ R ++ G LP ++
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLP--YV 173
Query: 302 APESLKDGVFTSHS-DVWSYGVVLWEM 327
APE LK F + DVWS G+VL M
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAM 200
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 106/232 (45%), Gaps = 29/232 (12%)
Query: 126 DELGNGSFGLV----YRGLIKDFRSLAEHPCAIKVANENASER--EKAEFLNEASVMKAF 179
+ELG+G F +V +G K++ + IK +S R + E E ++++
Sbjct: 32 EELGSGQFAIVRKCRQKGTGKEYAA-----KFIKKRRLXSSRRGVSREEIEREVNILREI 86
Query: 180 DTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAA 239
+++ L+ + ++I+EL+ GG+L ++L E+ T Q
Sbjct: 87 RHPNIITLHDIFENKTDVVLILELVSGGELFDFL----------AEKESLTEDEATQFLK 136
Query: 240 EVADGMAYLADKKFVHRDLAARNCMVAD----DLTVKVGDFGMTRDIYETEYYRKGSRGF 295
++ DG+ YL K+ H DL N M+ D + +K+ DFG+ I ++ F
Sbjct: 137 QILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN---IF 193
Query: 296 LPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV 347
++APE + +D+WS GV+ + + + AS P+ G + ++ L +
Sbjct: 194 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS-PFLGETKQETLTNI 244
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 97/234 (41%), Gaps = 28/234 (11%)
Query: 114 SWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
WE LD+ LG GSFG V L+K S + I + ++
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIE 86
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
LNE +++A + +VKL + + ++ME + GG++ ++LR AE
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARF- 145
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
AA++ YL ++RDL N ++ ++V DFG + + +
Sbjct: 146 ---------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT-----LASQPYQ 336
G+ +L APE + + D W+ GV+++EMA A QP Q
Sbjct: 197 XLCGTPEYL-----APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 33/213 (15%)
Query: 125 LDELGNGSFGLVYR------GLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKA 178
+ ELG G+ G+V + GLI + + IK A N + + E V+
Sbjct: 21 ISELGAGNGGVVTKVQHRPSGLIMARKLIH---LEIKPAIRN-------QIIRELQVLHE 70
Query: 179 FDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMA 238
++ ++V YG + ME M GG L L+ + R P + + +++
Sbjct: 71 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAK--------RIPEEI--LGKVS 120
Query: 239 AEVADGMAYLADK-KFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLP 297
V G+AYL +K + +HRD+ N +V +K+ DFG++ + ++ + F+
Sbjct: 121 IAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-----ANSFVG 175
Query: 298 VR-WMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
R +MAPE L+ ++ SD+WS G+ L E+A
Sbjct: 176 TRSYMAPERLQGTHYSVQSDIWSMGLSLVELAV 208
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 101/213 (47%), Gaps = 22/213 (10%)
Query: 118 LRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVAN-ENASEREKAEFLNEASVM 176
+S + +ELG G+F +V R + + LA A K+ N + S R+ + EA +
Sbjct: 20 FQSMYQLFEELGKGAFSVVRRCV----KVLAGQEYAAKIINTKKLSARDHQKLEREARIC 75
Query: 177 KAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQ 236
+ ++V+L+ +SE +I +L+ GG+L + + +E D S +Q
Sbjct: 76 RLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADA-------SHCIQ 128
Query: 237 MAAEVADGMAYLADKKFVHRDLAARNCMVADDL---TVKVGDFGMTRDIYETEYYRKGSR 293
++ + + + VHRDL N ++A L VK+ DFG+ E E ++
Sbjct: 129 ---QILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLA---IEVEGEQQAWF 182
Query: 294 GFLPVR-WMAPESLKDGVFTSHSDVWSYGVVLW 325
GF +++PE L+ + D+W+ GV+L+
Sbjct: 183 GFAGTPGYLSPEVLRKDPYGKPVDLWACGVILY 215
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 14/193 (7%)
Query: 162 SEREKAEFLNEASVMKAFDTHHVVKLYG-VVSEGNPTL-VIMELMGGGDLKNYLRSCRPD 219
+E EK ++E ++++ ++V+ Y ++ N TL ++ME GGDL + + +
Sbjct: 45 TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKE 104
Query: 220 A----ETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGD 275
E V R L+ L+ +DG +HRDL N + VK+GD
Sbjct: 105 RQYLDEEFVLRVMTQLTLALKECHRRSDG-----GHTVLHRDLKPANVFLDGKQNVKLGD 159
Query: 276 FGMTRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPY 335
FG+ R + + K G P +M+PE + + SD+WS G +L+E+ L P+
Sbjct: 160 FGLARILNHDTSFAKAFVG-TPY-YMSPEQMNRMSYNEKSDIWSLGCLLYELCALMP-PF 216
Query: 336 QGLSNEQVLNWVK 348
S +++ ++
Sbjct: 217 TAFSQKELAGKIR 229
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 99/234 (42%), Gaps = 28/234 (11%)
Query: 114 SWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
WE LD+ LG GSFG V L+K + + I + +E
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKEIE 86
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
LNE +++A + +VKL + + ++ME GG++ ++LR + R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR--------IGRF 138
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
+R AA++ YL ++RDL N M+ ++V DFG+ + + +
Sbjct: 139 SEPHARF--YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTW 196
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT-----LASQPYQ 336
G+ +L APE + + D W+ GV+++EMA A QP Q
Sbjct: 197 XLCGTPEYL-----APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 106/227 (46%), Gaps = 21/227 (9%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASERE--KAEFLNEASVMKAFDT 181
I +ELG+G F +V + K L IK AS R + E E S+++
Sbjct: 16 IGEELGSGQFAIVKKCREKS-TGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLH 74
Query: 182 HHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEV 241
+++ L+ V ++I+EL+ GG+L ++L +E E + + +IL
Sbjct: 75 PNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE---EEATSFIKQIL------ 125
Query: 242 ADGMAYLADKKFVHRDLAARNCMVADDLT----VKVGDFGMTRDIYETEYYRKGSRGFLP 297
DG+ YL KK H DL N M+ D +K+ DFG+ +I + ++ F
Sbjct: 126 -DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN---IFGT 181
Query: 298 VRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVL 344
++APE + +D+WS GV+ + + + AS P+ G + ++ L
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS-PFLGDTKQETL 227
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 99/234 (42%), Gaps = 28/234 (11%)
Query: 114 SWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
WE LD+ LG GSFG V L+K S + I + ++
Sbjct: 50 KWETPSQNTAQLDQFDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIE 107
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
LNE +++A + +VKL + + ++ME + GG++ ++LR + R
Sbjct: 108 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--------IGRF 159
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
+R AA++ YL ++RDL N ++ ++V DFG + + +
Sbjct: 160 SEPHARF--YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATW 217
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT-----LASQPYQ 336
G+ +L APE + + D W+ GV+++EMA A QP Q
Sbjct: 218 TLCGTPEYL-----APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 266
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 113/250 (45%), Gaps = 22/250 (8%)
Query: 108 KLYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
K+ + W+ + L E+G G++G V + + K + A+K E+E+
Sbjct: 10 KISPEQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIM----AVKRIRSTVDEKEQK 65
Query: 168 EFLNEASV-MKAFDTHHVVKLYGVVSEGNPTLVIMELMGGG--DLKNYLRSCRPDAETDV 224
+ L + V M++ D ++V+ YG + + MELM Y+ S D +
Sbjct: 66 QLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEE 125
Query: 225 ERSPPTLSRILQMAAEVADGMAYLADK-KFVHRDLAARNCMVADDLTVKVGDFGMTRDIY 283
TL+ + + +L + K +HRD+ N ++ +K+ DFG++ +
Sbjct: 126 ILGKITLATV--------KALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLV 177
Query: 284 ET--EYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSN- 340
++ + G R ++ + P + + G + SDVWS G+ L+E+AT PY ++
Sbjct: 178 DSIAKTRDAGCRPYMAPERIDPSASRQG-YDVRSDVWSLGITLYELAT-GRFPYPKWNSV 235
Query: 341 -EQVLNWVKG 349
+Q+ VKG
Sbjct: 236 FDQLTQVVKG 245
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 103/228 (45%), Gaps = 44/228 (19%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEH-----PCAIKVANE---NASEREKAEFLNEASV 175
+L +G G+F V LA H A+K+ ++ N+S +K E +
Sbjct: 18 LLKTIGKGNFAKV---------KLARHILTGKEVAVKIIDKTQLNSSSLQK--LFREVRI 66
Query: 176 MKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRIL 235
MK + ++VKL+ V+ ++ME GG++ +YL + E + ++
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEAR------AKFR 120
Query: 236 QMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSR-- 293
Q+ + V Y K VHRDL A N ++ D+ +K+ DFG + + + G++
Sbjct: 121 QIVSAVQ----YCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNE------FTFGNKLD 170
Query: 294 ---GFLPVRWMAPESLKDGVFTS-HSDVWSYGVVLWEMATLASQPYQG 337
G P + APE + + DVWS GV+L+ + + S P+ G
Sbjct: 171 AFCGAPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDG 215
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 103/228 (45%), Gaps = 44/228 (19%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEH-----PCAIKVANE---NASEREKAEFLNEASV 175
+L +G G+F V LA H A+K+ ++ N+S +K E +
Sbjct: 18 LLKTIGKGNFAKV---------KLARHILTGKEVAVKIIDKTQLNSSSLQK--LFREVRI 66
Query: 176 MKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRIL 235
MK + ++VKL+ V+ ++ME GG++ +YL + E + ++
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEAR------AKFR 120
Query: 236 QMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSR-- 293
Q+ + V Y K VHRDL A N ++ D+ +K+ DFG + + + G++
Sbjct: 121 QIVSAVQ----YCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNE------FTFGNKLD 170
Query: 294 ---GFLPVRWMAPESLKDGVFTS-HSDVWSYGVVLWEMATLASQPYQG 337
G P + APE + + DVWS GV+L+ + + S P+ G
Sbjct: 171 TFCGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDG 215
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 99/234 (42%), Gaps = 28/234 (11%)
Query: 114 SWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
WE LD+ LG GSFG V L+K S + I + ++
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIE 86
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
LNE +++A + +VKL + + ++ME + GG++ ++LR + R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--------IGRF 138
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
+R AA++ YL ++RDL N ++ ++V DFG + + +
Sbjct: 139 SEPHARF--YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT-----LASQPYQ 336
G+ +L APE + + D W+ GV+++EMA A QP Q
Sbjct: 197 XLCGTPEYL-----APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 98/211 (46%), Gaps = 29/211 (13%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANE----NASEREKAEFLNEASVMKAFD 180
+ ELG G+ G+V++ ++ P + +A + + + + E V+ +
Sbjct: 14 ISELGAGNGGVVFK--------VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 65
Query: 181 THHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAE 240
+ ++V YG + ME M GG L L+ R P + + +++
Sbjct: 66 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG--------RIPEQI--LGKVSIA 115
Query: 241 VADGMAYLADK-KFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVR 299
V G+ YL +K K +HRD+ N +V +K+ DFG++ + + + + F+ R
Sbjct: 116 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-----EMANEFVGTR 170
Query: 300 -WMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
+M+PE L+ ++ SD+WS G+ L EMA
Sbjct: 171 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 201
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 103/228 (45%), Gaps = 44/228 (19%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEH-----PCAIKVANE---NASEREKAEFLNEASV 175
+L +G G+F V LA H A+K+ ++ N+S +K E +
Sbjct: 18 LLKTIGKGNFAKV---------KLARHILTGKEVAVKIIDKTQLNSSSLQK--LFREVRI 66
Query: 176 MKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRIL 235
MK + ++VKL+ V+ ++ME GG++ +YL + E + ++
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEAR------AKFR 120
Query: 236 QMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSR-- 293
Q+ + V Y K VHRDL A N ++ D+ +K+ DFG + + + G++
Sbjct: 121 QIVSAVQ----YCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNE------FTFGNKLD 170
Query: 294 ---GFLPVRWMAPESLKDGVFTS-HSDVWSYGVVLWEMATLASQPYQG 337
G P + APE + + DVWS GV+L+ + + S P+ G
Sbjct: 171 TFCGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDG 215
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 99/234 (42%), Gaps = 28/234 (11%)
Query: 114 SWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
WE LD+ LG GSFG V L+K S + I + ++
Sbjct: 24 KWETPSQNTAQLDQFDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIE 81
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
LNE +++A + +VKL + + ++ME + GG++ ++LR + R
Sbjct: 82 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--------IGRF 133
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
+R AA++ YL ++RDL N ++ ++V DFG + + +
Sbjct: 134 XEPHARF--YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 191
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT-----LASQPYQ 336
G+ +L APE + + D W+ GV+++EMA A QP Q
Sbjct: 192 XLCGTPEYL-----APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 240
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 99/234 (42%), Gaps = 28/234 (11%)
Query: 114 SWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
WE LD+ LG GSFG V L+K S + I + ++
Sbjct: 30 KWETPSQNTAQLDQFDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIE 87
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
LNE +++A + +VKL + + ++ME + GG++ ++LR + R
Sbjct: 88 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--------IGRF 139
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
+R AA++ YL ++RDL N ++ ++V DFG + + +
Sbjct: 140 SEPHARF--YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 197
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT-----LASQPYQ 336
G+ +L APE + + D W+ GV+++EMA A QP Q
Sbjct: 198 XLCGTPEYL-----APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 99/234 (42%), Gaps = 28/234 (11%)
Query: 114 SWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
WE LD+ LG GSFG V L+K S + I + ++
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIE 86
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
LNE +++A + +VKL + + ++ME + GG++ ++LR + R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--------IGRF 138
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
+R AA++ YL ++RDL N ++ ++V DFG + + +
Sbjct: 139 XEPHARF--YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT-----LASQPYQ 336
G+ +L APE + + D W+ GV+++EMA A QP Q
Sbjct: 197 XLCGTPEYL-----APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 99/234 (42%), Gaps = 28/234 (11%)
Query: 114 SWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
WE LD+ LG GSFG V L+K S + I + ++
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIE 86
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
LNE +++A + +VKL + + ++ME + GG++ ++LR + R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--------IGRF 138
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
+R AA++ YL ++RDL N ++ ++V DFG + + +
Sbjct: 139 SEPHARF--YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT-----LASQPYQ 336
G+ +L APE + + D W+ GV+++EMA A QP Q
Sbjct: 197 XLCGTPEYL-----APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 99/234 (42%), Gaps = 28/234 (11%)
Query: 114 SWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
WE LD+ LG GSFG V L+K S + I + ++
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIE 86
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
LNE +++A + +VKL + + ++ME + GG++ ++LR + R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--------IGRF 138
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
+R AA++ YL ++RDL N ++ ++V DFG + + +
Sbjct: 139 SEPHARF--YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT-----LASQPYQ 336
G+ +L APE + + D W+ GV+++EMA A QP Q
Sbjct: 197 XLCGTPEYL-----APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 99/234 (42%), Gaps = 28/234 (11%)
Query: 114 SWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
WE LD+ LG GSFG V L+K S + I + ++
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIE 86
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
LNE +++A + +VKL + + ++ME + GG++ ++LR + R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--------IGRF 138
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
+R AA++ YL ++RDL N ++ ++V DFG + + +
Sbjct: 139 SEPHARF--YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT-----LASQPYQ 336
G+ +L APE + + D W+ GV+++EMA A QP Q
Sbjct: 197 XLCGTPEYL-----APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 99/234 (42%), Gaps = 28/234 (11%)
Query: 114 SWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
WE LD+ LG GSFG V L+K S + I + ++
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIE 86
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
LNE +++A + +VKL + + ++ME + GG++ ++LR + R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--------IGRF 138
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
+R AA++ YL ++RDL N ++ ++V DFG + + +
Sbjct: 139 XEPHARF--YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT-----LASQPYQ 336
G+ +L APE + + D W+ GV+++EMA A QP Q
Sbjct: 197 XLCGTPEYL-----APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 99/234 (42%), Gaps = 28/234 (11%)
Query: 114 SWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
WE LD+ LG GSFG V L+K S + I + ++
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIE 86
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
LNE +++A + +VKL + + ++ME + GG++ ++LR + R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--------IGRF 138
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
+R AA++ YL ++RDL N ++ ++V DFG + + +
Sbjct: 139 XEPHARF--YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT-----LASQPYQ 336
G+ +L APE + + D W+ GV+++EMA A QP Q
Sbjct: 197 XLCGTPEYL-----APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 99/234 (42%), Gaps = 28/234 (11%)
Query: 114 SWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
WE LD+ LG GSFG V L+K S + I + ++
Sbjct: 50 KWETPSQNTAQLDQFDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIE 107
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
LNE +++A + +VKL + + ++ME + GG++ ++LR + R
Sbjct: 108 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--------IGRF 159
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
+R AA++ YL ++RDL N ++ ++V DFG + + +
Sbjct: 160 XEPHARF--YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 217
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT-----LASQPYQ 336
G+ +L APE + + D W+ GV+++EMA A QP Q
Sbjct: 218 XLCGTPEYL-----APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 266
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 98/234 (41%), Gaps = 28/234 (11%)
Query: 114 SWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
WE LD+ LG GSFG V L+K + + I + ++
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIE 86
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
LNE +++A + +VKL + + ++ME GG++ ++LR + R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR--------IGRF 138
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
+R AA++ YL ++RDL N M+ +KV DFG + + +
Sbjct: 139 SEPHARFY--AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTW 196
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT-----LASQPYQ 336
G+ +L APE + + D W+ GV+++EMA A QP Q
Sbjct: 197 XLCGTPEYL-----APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 99/234 (42%), Gaps = 28/234 (11%)
Query: 114 SWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
WE LD+ LG GSFG V L+K S + I + ++
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIE 86
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
LNE +++A + +VKL + + ++ME + GG++ ++LR + R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--------IGRF 138
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
+R AA++ YL ++RDL N ++ ++V DFG + + +
Sbjct: 139 SEPHARF--YAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT-----LASQPYQ 336
G+ +L APE + + D W+ GV+++EMA A QP Q
Sbjct: 197 XLCGTPEYL-----APEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 113/263 (42%), Gaps = 32/263 (12%)
Query: 104 GDDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIK---VANEN 160
DDD L++ D +E + + +G G+F +V R + ++ A+K VA
Sbjct: 16 ADDDVLFE-DVYE-------LCEVIGKGAFSVVRRCINRE----TGQQFAVKIVDVAKFT 63
Query: 161 ASEREKAEFLN-EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPD 219
+S E L EAS+ H+V+L S ++ E M G DL
Sbjct: 64 SSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADL---CFEIVKR 120
Query: 220 AETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVA---DDLTVKVGDF 276
A+ S S ++ ++ + + Y D +HRD+ N ++A + VK+GDF
Sbjct: 121 ADAGFVYSEAVASHYMR---QILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDF 177
Query: 277 GMTRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQ 336
G+ + E+ G G +MAPE +K + DVW GV+L+ + + P+
Sbjct: 178 GVAIQLGESGLVAGGRVG--TPHFMAPEVVKREPYGKPVDVWGCGVILFILLS-GCLPFY 234
Query: 337 GLSNEQVLNWVKGKSSNEYKVNP 359
G +KGK YK+NP
Sbjct: 235 GTKERLFEGIIKGK----YKMNP 253
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 14/193 (7%)
Query: 162 SEREKAEFLNEASVMKAFDTHHVVKLYG-VVSEGNPTL-VIMELMGGGDLKNYLRSCRPD 219
+E EK ++E ++++ ++V+ Y ++ N TL ++ME GGDL + + +
Sbjct: 45 TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKE 104
Query: 220 A----ETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGD 275
E V R L+ L+ +DG +HRDL N + VK+GD
Sbjct: 105 RQYLDEEFVLRVMTQLTLALKECHRRSDG-----GHTVLHRDLKPANVFLDGKQNVKLGD 159
Query: 276 FGMTRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPY 335
FG+ R + + K G P +M+PE + + SD+WS G +L+E+ L P+
Sbjct: 160 FGLARILNHDTSFAKTFVG-TPY-YMSPEQMNRMSYNEKSDIWSLGCLLYELCALMP-PF 216
Query: 336 QGLSNEQVLNWVK 348
S +++ ++
Sbjct: 217 TAFSQKELAGKIR 229
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 123/264 (46%), Gaps = 36/264 (13%)
Query: 111 KKDSWEVLRSKVT---ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENA--SERE 165
K+ S + R K+T L LG GSFG V ++ D R E AIK+ ++ + +
Sbjct: 7 KQPSNNLDRVKLTDFNFLMVLGKGSFGKV---MLAD-RKGTEELYAIKILKKDVVIQDDD 62
Query: 166 KAEFLNEASVMKAFDTH-HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDV 224
+ E V+ D + +L+ + +ME + GGDL +++ E
Sbjct: 63 VECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKE--- 119
Query: 225 ERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYE 284
+ + AAE++ G+ +L + ++RDL N M+ + +K+ DFGM +
Sbjct: 120 -------PQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCK---- 168
Query: 285 TEYYRKG--SRGFLPV-RWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQ-PYQGLSN 340
E+ G +R F ++APE + + D W+YGV+L+EM LA Q P+ G
Sbjct: 169 -EHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEM--LAGQPPFDGEDE 225
Query: 341 EQVLNWVKGKSSNEYKVNPPISLS 364
+++ +S E+ V+ P SLS
Sbjct: 226 DELF-----QSIMEHNVSYPKSLS 244
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 98/234 (41%), Gaps = 28/234 (11%)
Query: 114 SWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
WE LD+ LG GSFG V L+K + + I + ++
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIE 86
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
LNE +++A + +VKL + + ++ME GG++ ++LR + R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR--------IGRF 138
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
+R AA++ YL ++RDL N M+ +KV DFG + + +
Sbjct: 139 XEPHARFY--AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTW 196
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT-----LASQPYQ 336
G+ +L APE + + D W+ GV+++EMA A QP Q
Sbjct: 197 XLCGTPEYL-----APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 103/228 (45%), Gaps = 44/228 (19%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEH-----PCAIKVANE---NASEREKAEFLNEASV 175
+L +G G+F V LA H A+K+ ++ N+S +K E +
Sbjct: 11 LLKTIGKGNFAKV---------KLARHILTGKEVAVKIIDKTQLNSSSLQK--LFREVRI 59
Query: 176 MKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRIL 235
MK + ++VKL+ V+ ++ME GG++ +YL + E + ++
Sbjct: 60 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEAR------AKFR 113
Query: 236 QMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSR-- 293
Q+ + V Y K VHRDL A N ++ D+ +K+ DFG + + + G++
Sbjct: 114 QIVSAVQ----YCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNE------FTFGNKLD 163
Query: 294 ---GFLPVRWMAPESLKDGVFTS-HSDVWSYGVVLWEMATLASQPYQG 337
G P + APE + + DVWS GV+L+ + + S P+ G
Sbjct: 164 TFCGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDG 208
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 19/207 (9%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHH 183
++ LG G+ G V + + E A+K+ + + E + K + +
Sbjct: 10 LVQTLGEGAAGEVQLAV----NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
VVK YG EGN + +E GG+L + + E D+ P R ++
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRI-------EPDIGMPEPDAQRFFH---QLMA 115
Query: 244 GMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSR--GFLPVRWM 301
G+ YL HRD+ N ++ + +K+ DFG+ R ++ G LP ++
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP--YV 173
Query: 302 APESLKDGVFTSHS-DVWSYGVVLWEM 327
APE LK F + DVWS G+VL M
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAM 200
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 95/235 (40%), Gaps = 20/235 (8%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG G F + D + + K +REK E S+ ++ HVV
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM--EISIHRSLAHQHVVGF 82
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDA--ETDVERSPPTLSRILQMAAEVADGM 245
+G + + V++EL CR + E R T ++ G
Sbjct: 83 HGFFEDNDFVFVVLEL------------CRRRSLLELHKRRKALTEPEARYYLRQIVLGC 130
Query: 246 AYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPES 305
YL + +HRDL N + +DL VK+GDFG+ + E + RK + P ++APE
Sbjct: 131 QYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKTLCGTP-NYIAPEV 188
Query: 306 LKDGVFTSHSDVWSYGVVLWEMATLASQPYQ-GLSNEQVLNWVKGKSSNEYKVNP 359
L + DVWS G +++ + + P++ E L K + S +NP
Sbjct: 189 LSKKGHSFEVDVWSIGCIMYTL-LVGKPPFETSCLKETYLRIKKNEYSIPKHINP 242
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 95/235 (40%), Gaps = 20/235 (8%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG G F + D + + K +REK E S+ ++ HVV
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM--EISIHRSLAHQHVVGF 82
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDA--ETDVERSPPTLSRILQMAAEVADGM 245
+G + + V++EL CR + E R T ++ G
Sbjct: 83 HGFFEDNDFVFVVLEL------------CRRRSLLELHKRRKALTEPEARYYLRQIVLGC 130
Query: 246 AYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPES 305
YL + +HRDL N + +DL VK+GDFG+ + E + RK + P ++APE
Sbjct: 131 QYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKTLCGTP-NYIAPEV 188
Query: 306 LKDGVFTSHSDVWSYGVVLWEMATLASQPYQ-GLSNEQVLNWVKGKSSNEYKVNP 359
L + DVWS G +++ + + P++ E L K + S +NP
Sbjct: 189 LSKKGHSFEVDVWSIGCIMYTL-LVGKPPFETSCLKETYLRIKKNEYSIPKHINP 242
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 99/223 (44%), Gaps = 34/223 (15%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEH-----PCAIKVANE---NASEREKAEFLNEASV 175
+L +G G+F V LA H A+++ ++ N+S +K E +
Sbjct: 18 LLKTIGKGNFAKV---------KLARHILTGKEVAVRIIDKTQLNSSSLQK--LFREVRI 66
Query: 176 MKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRIL 235
MK + ++VKL+ V+ ++ME GG++ +YL + E + ++
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEAR------AKFR 120
Query: 236 QMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGF 295
Q+ + V Y K VHRDL A N ++ D+ +K+ DFG + E + K
Sbjct: 121 QIVSAVQ----YCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN---EFTFGNKLDEFC 173
Query: 296 LPVRWMAPESLKDGVFTS-HSDVWSYGVVLWEMATLASQPYQG 337
+ APE + + DVWS GV+L+ + + S P+ G
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDG 215
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 103/228 (45%), Gaps = 44/228 (19%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEH-----PCAIKVANE---NASEREKAEFLNEASV 175
+L +G G+F V LA H A+++ ++ N+S +K E +
Sbjct: 18 LLKTIGKGNFAKV---------KLARHILTGKEVAVRIIDKTQLNSSSLQK--LFREVRI 66
Query: 176 MKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRIL 235
MK + ++VKL+ V+ ++ME GG++ +YL + E + ++
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEAR------AKFR 120
Query: 236 QMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSR-- 293
Q+ + V Y K VHRDL A N ++ D+ +K+ DFG + + + G++
Sbjct: 121 QIVSAVQ----YCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNE------FTFGNKLD 170
Query: 294 ---GFLPVRWMAPESLKDGVFTS-HSDVWSYGVVLWEMATLASQPYQG 337
G P + APE + + DVWS GV+L+ + + S P+ G
Sbjct: 171 TFCGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDG 215
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 103/247 (41%), Gaps = 50/247 (20%)
Query: 122 VTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDT 181
+ +L+ +G G +G VY+G SL E P A+KV S + F+NE ++ +
Sbjct: 15 LKLLELIGRGRYGAVYKG------SLDERPVAVKVF----SFANRQNFINEKNIYRVPLM 64
Query: 182 HH------VVKLYGVVSEGN-PTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRI 234
H +V V ++G L++ME G L YL D +
Sbjct: 65 EHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSC---------- 114
Query: 235 LQMAAEVADGMAYLADK---------KFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
++A V G+AYL + HRDL +RN +V +D T + DFG++ +
Sbjct: 115 -RLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGN 173
Query: 286 EYYRKGSRGFLP------VRWMAPESLKDGV-------FTSHSDVWSYGVVLWEMATLAS 332
R G +R+MAPE L+ V D+++ G++ WE+ +
Sbjct: 174 RLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCT 233
Query: 333 QPYQGLS 339
+ G S
Sbjct: 234 DLFPGES 240
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 99/234 (42%), Gaps = 28/234 (11%)
Query: 114 SWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
WE LD+ LG GSFG V L+K S + I + ++
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIE 86
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
LNE +++A + +VKL + + ++ME + GG++ ++LR + R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--------IGRF 138
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
+R AA++ YL ++RDL N ++ ++V DFG + + +
Sbjct: 139 SEPHARF--YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT-----LASQPYQ 336
G+ +L APE + + D W+ GV++++MA A QP Q
Sbjct: 197 XLCGTPEYL-----APEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQ 245
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 98/234 (41%), Gaps = 28/234 (11%)
Query: 114 SWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
WE LD+ LG GSFG V L+K + + I + ++
Sbjct: 30 KWESPAQNTAHLDQFERIKTLGTGSFGRVM--LVKHKETGNHYAMKILDKQKVVKLKQIE 87
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
LNE +++A + +VKL + + ++ME GG++ ++LR + R
Sbjct: 88 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR--------IGRF 139
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
+R AA++ YL ++RDL N M+ +KV DFG + + +
Sbjct: 140 SEPHARFY--AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTW 197
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT-----LASQPYQ 336
G+ +L APE + + D W+ GV+++EMA A QP Q
Sbjct: 198 XLCGTPEYL-----APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 100/207 (48%), Gaps = 23/207 (11%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHH 183
+ +ELG G+F +V R + K + A + + S R+ + EA + + +
Sbjct: 10 VKEELGKGAFSVVRRCVHK---TTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN 66
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
+V+L+ + E + ++ +L+ GG+L + + +E D S +Q ++ +
Sbjct: 67 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADA-------SHCIQ---QILE 116
Query: 244 GMAYLADKKFVHRDLAARNCMVADDL---TVKVGDFGMTRDIYETEYYR--KGSRGFLPV 298
+AY VHR+L N ++A VK+ DFG+ ++ ++E + G+ G+L
Sbjct: 117 SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYL-- 174
Query: 299 RWMAPESLKDGVFTSHSDVWSYGVVLW 325
+PE LK ++ D+W+ GV+L+
Sbjct: 175 ---SPEVLKKDPYSKPVDIWACGVILY 198
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 95/235 (40%), Gaps = 20/235 (8%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG G F + D + + K +REK E S+ ++ HVV
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM--EISIHRSLAHQHVVGF 86
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDA--ETDVERSPPTLSRILQMAAEVADGM 245
+G + + V++EL CR + E R T ++ G
Sbjct: 87 HGFFEDNDFVFVVLEL------------CRRRSLLELHKRRKALTEPEARYYLRQIVLGC 134
Query: 246 AYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPES 305
YL + +HRDL N + +DL VK+GDFG+ + E + RK + P ++APE
Sbjct: 135 QYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKTLCGTP-NYIAPEV 192
Query: 306 LKDGVFTSHSDVWSYGVVLWEMATLASQPYQ-GLSNEQVLNWVKGKSSNEYKVNP 359
L + DVWS G +++ + + P++ E L K + S +NP
Sbjct: 193 LSKKGHSFEVDVWSIGCIMYTL-LVGKPPFETSCLKETYLRIKKNEYSIPKHINP 246
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 99/234 (42%), Gaps = 28/234 (11%)
Query: 114 SWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
WE LD+ +G GSFG V L+K + + I + ++
Sbjct: 29 KWENPAQNTAHLDQFERIKTIGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIE 86
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
LNE +++A + +VKL + + ++ME + GG++ ++LR + R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--------IGRF 138
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
+R AA++ YL ++RDL N ++ +KV DFG + + +
Sbjct: 139 SEPHARF--YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTW 196
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT-----LASQPYQ 336
G+ +L APE + + D W+ GV+++EMA A QP Q
Sbjct: 197 XLCGTPEYL-----APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 100/207 (48%), Gaps = 23/207 (11%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHH 183
+ +ELG G+F +V R + K + A + + S R+ + EA + + +
Sbjct: 10 VKEELGKGAFSVVRRCVHK---TTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN 66
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
+V+L+ + E + ++ +L+ GG+L + + +E D S +Q ++ +
Sbjct: 67 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADA-------SHCIQ---QILE 116
Query: 244 GMAYLADKKFVHRDLAARNCMVADDL---TVKVGDFGMTRDIYETEYYR--KGSRGFLPV 298
+AY VHR+L N ++A VK+ DFG+ ++ ++E + G+ G+L
Sbjct: 117 SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYL-- 174
Query: 299 RWMAPESLKDGVFTSHSDVWSYGVVLW 325
+PE LK ++ D+W+ GV+L+
Sbjct: 175 ---SPEVLKKDPYSKPVDIWACGVILY 198
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 100/207 (48%), Gaps = 23/207 (11%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHH 183
+ +ELG G+F +V R + K + A + + S R+ + EA + + +
Sbjct: 9 VKEELGKGAFSVVRRCVHK---TTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN 65
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
+V+L+ + E + ++ +L+ GG+L + + +E D S +Q ++ +
Sbjct: 66 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADA-------SHCIQ---QILE 115
Query: 244 GMAYLADKKFVHRDLAARNCMVADDL---TVKVGDFGMTRDIYETEYYR--KGSRGFLPV 298
+AY VHR+L N ++A VK+ DFG+ ++ ++E + G+ G+L
Sbjct: 116 SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYL-- 173
Query: 299 RWMAPESLKDGVFTSHSDVWSYGVVLW 325
+PE LK ++ D+W+ GV+L+
Sbjct: 174 ---SPEVLKKDPYSKPVDIWACGVILY 197
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 82/200 (41%), Gaps = 12/200 (6%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG GSF V L ++ + E+ I E + E VM D VKL
Sbjct: 16 LGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 73
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
Y + + G+L Y+R ET +R AE+ + Y
Sbjct: 74 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--------CTRF--YTAEIVSALEY 123
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLK 307
L K +HRDL N ++ +D+ +++ DFG + + + + ++++PE L
Sbjct: 124 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 183
Query: 308 DGVFTSHSDVWSYGVVLWEM 327
+ SD+W+ G +++++
Sbjct: 184 EKSACKSSDLWALGCIIYQL 203
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 89/207 (42%), Gaps = 19/207 (9%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHH 183
++ LG G++G V + + E A+K+ + + E + + +
Sbjct: 11 LVQTLGEGAYGEVQLAV----NRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHEN 66
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
VVK YG EGN + +E GG+L + + E D+ P R ++
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRI-------EPDIGMPEPDAQRFFH---QLMA 116
Query: 244 GMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSR--GFLPVRWM 301
G+ YL HRD+ N ++ + +K+ DFG+ R ++ G LP ++
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP--YV 174
Query: 302 APESLKDGVFTSHS-DVWSYGVVLWEM 327
APE LK F + DVWS G+VL M
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAM 201
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 82/200 (41%), Gaps = 12/200 (6%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG GSF V L ++ + E+ I E + E VM D VKL
Sbjct: 17 LGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 74
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
Y + + G+L Y+R ET +R AE+ + Y
Sbjct: 75 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--------CTRF--YTAEIVSALEY 124
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLK 307
L K +HRDL N ++ +D+ +++ DFG + + + + ++++PE L
Sbjct: 125 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 184
Query: 308 DGVFTSHSDVWSYGVVLWEM 327
+ SD+W+ G +++++
Sbjct: 185 EKSACKSSDLWALGCIIYQL 204
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 82/200 (41%), Gaps = 12/200 (6%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG GSF V L ++ + E+ I E + E VM D VKL
Sbjct: 18 LGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 75
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
Y + + G+L Y+R ET +R AE+ + Y
Sbjct: 76 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--------CTRF--YTAEIVSALEY 125
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLK 307
L K +HRDL N ++ +D+ +++ DFG + + + + ++++PE L
Sbjct: 126 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 185
Query: 308 DGVFTSHSDVWSYGVVLWEM 327
+ SD+W+ G +++++
Sbjct: 186 EKSACKSSDLWALGCIIYQL 205
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 14/201 (6%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG GSF V L ++ + E+ I E + E VM D VKL
Sbjct: 37 LGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 94
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
Y + + G+L Y+R ET +R AE+ + Y
Sbjct: 95 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--------CTRF--YTAEIVSALEY 144
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFL-PVRWMAPESL 306
L K +HRDL N ++ +D+ +++ DFG T + E + + F+ ++++PE L
Sbjct: 145 LHGKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANSFVGTAQYVSPELL 203
Query: 307 KDGVFTSHSDVWSYGVVLWEM 327
+ SD+W+ G +++++
Sbjct: 204 TEKSACKSSDLWALGCIIYQL 224
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 99/234 (42%), Gaps = 28/234 (11%)
Query: 114 SWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
WE LD+ LG GSFG V L+K + + I + ++
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIE 86
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
LNE +++A + +VKL + + ++ME + GG++ ++LR + R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--------IGRF 138
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
+R AA++ YL ++RDL N ++ ++V DFG + + +
Sbjct: 139 SEPHARF--YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT-----LASQPYQ 336
G+ +L APE + + D W+ GV+++EMA A QP Q
Sbjct: 197 XLCGTPEYL-----APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 130/307 (42%), Gaps = 57/307 (18%)
Query: 104 GDDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENA-- 161
G ++ ++ S L+ K + +G GS+G+V + R++ AIK+ N+N
Sbjct: 10 GRENLYFQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIR----AIKIMNKNKIR 65
Query: 162 --SEREKAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLR----- 214
+ ++ E +MK ++ +LY V + ++MEL GG L + L
Sbjct: 66 QINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDD 125
Query: 215 ------------------SCRPDA----------ETDVERSPPTLSRILQMAAEVADGMA 246
C +A D + +S I++ ++ +
Sbjct: 126 STGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMR---QIFSALH 182
Query: 247 YLADKKFVHRDLAARNCMVADD--LTVKVGDFGMTRDIYET---EYYRKGSRGFLPVRWM 301
YL ++ HRD+ N + + + +K+ DFG++++ Y+ EYY ++ P ++
Sbjct: 183 YLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPY-FV 241
Query: 302 APESLK--DGVFTSHSDVWSYGVVLWEMATLASQPYQGLSN----EQVLNWVKGKSSNEY 355
APE L + + D WS GV+L + + + P+ G+++ QVLN + Y
Sbjct: 242 APEVLNTTNESYGPKCDAWSAGVLL-HLLLMGAVPFPGVNDADTISQVLNKKLCFENPNY 300
Query: 356 KVNPPIS 362
V P++
Sbjct: 301 NVLSPLA 307
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 100/207 (48%), Gaps = 23/207 (11%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHH 183
+ +ELG G+F +V R + K + A + + S R+ + EA + + +
Sbjct: 33 VKEELGKGAFSVVRRCVHK---TTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN 89
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
+V+L+ + E + ++ +L+ GG+L + + +E D S +Q ++ +
Sbjct: 90 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADA-------SHCIQ---QILE 139
Query: 244 GMAYLADKKFVHRDLAARNCMVADDL---TVKVGDFGMTRDIYETEYYR--KGSRGFLPV 298
+AY VHR+L N ++A VK+ DFG+ ++ ++E + G+ G+L
Sbjct: 140 SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYL-- 197
Query: 299 RWMAPESLKDGVFTSHSDVWSYGVVLW 325
+PE LK ++ D+W+ GV+L+
Sbjct: 198 ---SPEVLKKDPYSKPVDIWACGVILY 221
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 99/234 (42%), Gaps = 28/234 (11%)
Query: 114 SWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
WE LD+ LG GSFG V L+K S + I + ++
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIE 86
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
LNE +++A + +VKL + + ++ME + GG++ ++LR + R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--------IGRF 138
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
+R AA++ YL ++RDL N ++ ++V DFG + + +
Sbjct: 139 SEPHARF--YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT-----LASQPYQ 336
G+ +L APE + + D W+ GV+++EMA A +P Q
Sbjct: 197 XLCGTPEYL-----APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQ 245
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 82/200 (41%), Gaps = 12/200 (6%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG GSF V L ++ + E+ I E + E VM D VKL
Sbjct: 15 LGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 72
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
Y + + G+L Y+R ET +R AE+ + Y
Sbjct: 73 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--------CTRF--YTAEIVSALEY 122
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLK 307
L K +HRDL N ++ +D+ +++ DFG + + + + ++++PE L
Sbjct: 123 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 182
Query: 308 DGVFTSHSDVWSYGVVLWEM 327
+ SD+W+ G +++++
Sbjct: 183 EKSACKSSDLWALGCIIYQL 202
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 14/201 (6%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG GSF V L ++ + E+ I E + E VM D VKL
Sbjct: 38 LGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
Y + + G+L Y+R ET +R AE+ + Y
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--------CTRF--YTAEIVSALEY 145
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFL-PVRWMAPESL 306
L K +HRDL N ++ +D+ +++ DFG T + E + + F+ ++++PE L
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANAFVGTAQYVSPELL 204
Query: 307 KDGVFTSHSDVWSYGVVLWEM 327
+ SD+W+ G +++++
Sbjct: 205 TEKSACKSSDLWALGCIIYQL 225
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 98/234 (41%), Gaps = 28/234 (11%)
Query: 114 SWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
WE LD+ LG GSFG V L+K + + I + ++
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIE 86
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
LNE +++A + +VKL + + ++ME GG++ ++LR + R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR--------IGRF 138
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
+R AA++ YL ++RDL N M+ ++V DFG + + +
Sbjct: 139 SEPHARFY--AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT-----LASQPYQ 336
G+ +L APE + + D W+ GV+++EMA A QP Q
Sbjct: 197 XLCGTPEYL-----APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 82/200 (41%), Gaps = 12/200 (6%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG GSF V L ++ + E+ I E + E VM D VKL
Sbjct: 22 LGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 79
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
Y + + G+L Y+R ET +R AE+ + Y
Sbjct: 80 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--------CTRF--YTAEIVSALEY 129
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLK 307
L K +HRDL N ++ +D+ +++ DFG + + + + ++++PE L
Sbjct: 130 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 189
Query: 308 DGVFTSHSDVWSYGVVLWEM 327
+ SD+W+ G +++++
Sbjct: 190 EKSACKSSDLWALGCIIYQL 209
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 14/201 (6%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG GSF V L ++ + E+ I E + E VM D VKL
Sbjct: 41 LGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 98
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
Y + + G+L Y+R ET +R AE+ + Y
Sbjct: 99 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--------CTRF--YTAEIVSALEY 148
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFL-PVRWMAPESL 306
L K +HRDL N ++ +D+ +++ DFG T + E + + F+ ++++PE L
Sbjct: 149 LHGKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANSFVGTAQYVSPELL 207
Query: 307 KDGVFTSHSDVWSYGVVLWEM 327
+ SD+W+ G +++++
Sbjct: 208 TEKSACKSSDLWALGCIIYQL 228
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 97/234 (41%), Gaps = 28/234 (11%)
Query: 114 SWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
WE LD+ LG GSFG V L+K + + I + ++
Sbjct: 30 KWENPAQNTAHLDQFERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIE 87
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
LNE +++A + + KL + + ++ME GG++ ++LR + R
Sbjct: 88 HTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR--------IGRF 139
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
+R AA++ YL ++RDL N M+ +KV DFG + + +
Sbjct: 140 SEPHARFY--AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTW 197
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT-----LASQPYQ 336
G+ +L APE + + D W+ GV+++EMA A QP Q
Sbjct: 198 XLCGTPEYL-----APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 82/200 (41%), Gaps = 12/200 (6%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG GSF V L ++ + E+ I E + E VM D VKL
Sbjct: 37 LGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 94
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
Y + + G+L Y+R ET +R AE+ + Y
Sbjct: 95 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--------CTRF--YTAEIVSALEY 144
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLK 307
L K +HRDL N ++ +D+ +++ DFG + + + + ++++PE L
Sbjct: 145 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 204
Query: 308 DGVFTSHSDVWSYGVVLWEM 327
+ SD+W+ G +++++
Sbjct: 205 EKSACKSSDLWALGCIIYQL 224
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 97/215 (45%), Gaps = 24/215 (11%)
Query: 116 EVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASV 175
E +R D LG G+F V L +D R+ + AIK + A E ++ NE +V
Sbjct: 14 EDIRDIYDFRDVLGTGAFSEVI--LAEDKRT--QKLVAIKCIAKEALEGKEGSMENEIAV 69
Query: 176 MKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRIL 235
+ ++V L + G +IM+L+ GG+L + + VE+ T
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI----------VEKGFYTERDAS 119
Query: 236 QMAAEVADGMAYLADKKFVHRDLAARNCM---VADDLTVKVGDFGMTR--DIYETEYYRK 290
++ +V D + YL D VHRDL N + + +D + + DFG+++ D
Sbjct: 120 RLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC 179
Query: 291 GSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLW 325
G+ G++ APE L ++ D WS GV+ +
Sbjct: 180 GTPGYV-----APEVLAQKPYSKAVDCWSIGVIAY 209
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 97/215 (45%), Gaps = 24/215 (11%)
Query: 116 EVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASV 175
E +R D LG G+F V L +D R+ + AIK + A E ++ NE +V
Sbjct: 14 EDIRDIYDFRDVLGTGAFSEVI--LAEDKRT--QKLVAIKCIAKEALEGKEGSMENEIAV 69
Query: 176 MKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRIL 235
+ ++V L + G +IM+L+ GG+L + + VE+ T
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI----------VEKGFYTERDAS 119
Query: 236 QMAAEVADGMAYLADKKFVHRDLAARNCM---VADDLTVKVGDFGMTR--DIYETEYYRK 290
++ +V D + YL D VHRDL N + + +D + + DFG+++ D
Sbjct: 120 RLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC 179
Query: 291 GSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLW 325
G+ G++ APE L ++ D WS GV+ +
Sbjct: 180 GTPGYV-----APEVLAQKPYSKAVDCWSIGVIAY 209
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 94/235 (40%), Gaps = 20/235 (8%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG G F + D + + K +REK E S+ ++ HVV
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM--EISIHRSLAHQHVVGF 80
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDA--ETDVERSPPTLSRILQMAAEVADGM 245
+G + + V++EL CR + E R T ++ G
Sbjct: 81 HGFFEDNDFVFVVLEL------------CRRRSLLELHKRRKALTEPEARYYLRQIVLGC 128
Query: 246 AYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPES 305
YL + +HRDL N + +DL VK+GDFG+ + E + RK P ++APE
Sbjct: 129 QYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKVLCGTP-NYIAPEV 186
Query: 306 LKDGVFTSHSDVWSYGVVLWEMATLASQPYQ-GLSNEQVLNWVKGKSSNEYKVNP 359
L + DVWS G +++ + + P++ E L K + S +NP
Sbjct: 187 LSKKGHSFEVDVWSIGCIMYTL-LVGKPPFETSCLKETYLRIKKNEYSIPKHINP 240
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 97/234 (41%), Gaps = 28/234 (11%)
Query: 114 SWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
WE LD+ LG GSFG V L+K + + I + ++
Sbjct: 30 KWENPAQNTAHLDQFERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIE 87
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
LNE +++A + + KL + + ++ME GG++ ++LR + R
Sbjct: 88 HTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR--------IGRF 139
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
+R AA++ YL ++RDL N M+ +KV DFG + + +
Sbjct: 140 SEPHARFY--AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTW 197
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT-----LASQPYQ 336
G+ +L APE + + D W+ GV+++EMA A QP Q
Sbjct: 198 XLCGTPEYL-----APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 97/215 (45%), Gaps = 24/215 (11%)
Query: 116 EVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASV 175
E +R D LG G+F V L +D R+ + AIK + A E ++ NE +V
Sbjct: 14 EDIRDIYDFRDVLGTGAFSEVI--LAEDKRT--QKLVAIKCIAKKALEGKEGSMENEIAV 69
Query: 176 MKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRIL 235
+ ++V L + G +IM+L+ GG+L + + VE+ T
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI----------VEKGFYTERDAS 119
Query: 236 QMAAEVADGMAYLADKKFVHRDLAARNCM---VADDLTVKVGDFGMTR--DIYETEYYRK 290
++ +V D + YL D VHRDL N + + +D + + DFG+++ D
Sbjct: 120 RLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC 179
Query: 291 GSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLW 325
G+ G++ APE L ++ D WS GV+ +
Sbjct: 180 GTPGYV-----APEVLAQKPYSKAVDCWSIGVIAY 209
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 99/234 (42%), Gaps = 28/234 (11%)
Query: 114 SWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
WE LD+ LG GSFG V L+K + + I + ++
Sbjct: 30 KWENPAQNTAHLDQFERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIE 87
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
LNE +++A + +VKL + + ++ME + GG++ ++LR + R
Sbjct: 88 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--------IGRF 139
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
+R AA++ YL ++RDL N ++ ++V DFG + + +
Sbjct: 140 SEPHARF--YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 197
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT-----LASQPYQ 336
G+ +L APE + + D W+ GV+++EMA A QP Q
Sbjct: 198 XLCGTPEYL-----APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 99/230 (43%), Gaps = 38/230 (16%)
Query: 120 SKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAF 179
K L+++G G++G V++ R E +V ++ E + L E ++K
Sbjct: 2 QKYEKLEKIGEGTYGTVFKA---KNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL 58
Query: 180 DTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAA 239
++V+L+ V+ ++ E DLK Y SC D + ++ +S
Sbjct: 59 KHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKS---------FLF 108
Query: 240 EVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGF-LPV 298
++ G+ + + +HRDL +N ++ + +K+ DFG+ +R F +PV
Sbjct: 109 QLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGL-------------ARAFGIPV 155
Query: 299 R---------WMAPESLKDG--VFTSHSDVWSYGVVLWEMATLASQPYQG 337
R W P + G ++++ D+WS G + E+A A + G
Sbjct: 156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPG 205
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 97/234 (41%), Gaps = 28/234 (11%)
Query: 114 SWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
WE LD+ LG GSFG V L+K + + I + ++
Sbjct: 30 KWENPAQNTAHLDQFERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIE 87
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
LNE +++A + + KL + + ++ME GG++ ++LR + R
Sbjct: 88 HTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR--------IGRF 139
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
+R AA++ YL ++RDL N M+ +KV DFG + + +
Sbjct: 140 XEPHARFY--AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTW 197
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT-----LASQPYQ 336
G+ +L APE + + D W+ GV+++EMA A QP Q
Sbjct: 198 XLCGTPEYL-----APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 99/234 (42%), Gaps = 28/234 (11%)
Query: 114 SWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
WE LD+ LG GSFG V L+K + + I + ++
Sbjct: 15 KWENPAQNTAHLDQFERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIE 72
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
LNE +++A + +VKL + + ++ME + GG++ ++LR + R
Sbjct: 73 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--------IGRF 124
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
+R AA++ YL ++RDL N ++ ++V DFG + + +
Sbjct: 125 SEPHARF--YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 182
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT-----LASQPYQ 336
G+ +L APE + + D W+ GV+++EMA A QP Q
Sbjct: 183 TLCGTPEYL-----APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 231
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 97/215 (45%), Gaps = 24/215 (11%)
Query: 116 EVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASV 175
E +R D LG G+F V L +D R+ + AIK + A E ++ NE +V
Sbjct: 14 EDIRDIYDFRDVLGTGAFSEVI--LAEDKRT--QKLVAIKCIAKEALEGKEGSMENEIAV 69
Query: 176 MKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRIL 235
+ ++V L + G +IM+L+ GG+L + + VE+ T
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI----------VEKGFYTERDAS 119
Query: 236 QMAAEVADGMAYLADKKFVHRDLAARNCM---VADDLTVKVGDFGMTR--DIYETEYYRK 290
++ +V D + YL D VHRDL N + + +D + + DFG+++ D
Sbjct: 120 RLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC 179
Query: 291 GSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLW 325
G+ G++ APE L ++ D WS GV+ +
Sbjct: 180 GTPGYV-----APEVLAQKPYSKAVDCWSIGVIAY 209
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 101/225 (44%), Gaps = 21/225 (9%)
Query: 126 DELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASER--EKAEFLNEASVMKAFDTHH 183
+ELG+G F +V + K L IK +S R + + E S++K +
Sbjct: 17 EELGSGQFAVVKKCREKS-TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
V+ L+ V ++I+EL+ GG+L ++L E+ T + ++ +
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFL----------AEKESLTEEEATEFLKQILN 125
Query: 244 GMAYLADKKFVHRDLAARNCMVAD----DLTVKVGDFGMTRDIYETEYYRKGSRGFLPVR 299
G+ YL + H DL N M+ D +K+ DFG+ I ++ + F
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPE 182
Query: 300 WMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVL 344
++APE + +D+WS GV+ + + + AS P+ G + ++ L
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGAS-PFLGDTKQETL 226
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 82/200 (41%), Gaps = 12/200 (6%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG GSF V L ++ + E+ I E + E VM D VKL
Sbjct: 40 LGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
Y + + G+L Y+R ET +R AE+ + Y
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--------CTRF--YTAEIVSALEY 147
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLK 307
L K +HRDL N ++ +D+ +++ DFG + + + + ++++PE L
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 308 DGVFTSHSDVWSYGVVLWEM 327
+ SD+W+ G +++++
Sbjct: 208 EKSACKSSDLWALGCIIYQL 227
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 82/200 (41%), Gaps = 12/200 (6%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG GSF V L ++ + E+ I E + E VM D VKL
Sbjct: 38 LGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
Y + + G+L Y+R ET +R AE+ + Y
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--------CTRF--YTAEIVSALEY 145
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLK 307
L K +HRDL N ++ +D+ +++ DFG + + + + ++++PE L
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 308 DGVFTSHSDVWSYGVVLWEM 327
+ SD+W+ G +++++
Sbjct: 206 EKSACKSSDLWALGCIIYQL 225
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 101/225 (44%), Gaps = 21/225 (9%)
Query: 126 DELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASER--EKAEFLNEASVMKAFDTHH 183
+ELG+G F +V + K L IK +S R + + E S++K +
Sbjct: 17 EELGSGQFAVVKKCREKS-TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
V+ L+ V ++I+EL+ GG+L ++L E+ T + ++ +
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFL----------AEKESLTEEEATEFLKQILN 125
Query: 244 GMAYLADKKFVHRDLAARNCMVAD----DLTVKVGDFGMTRDIYETEYYRKGSRGFLPVR 299
G+ YL + H DL N M+ D +K+ DFG+ I ++ + F
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPE 182
Query: 300 WMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVL 344
++APE + +D+WS GV+ + + + AS P+ G + ++ L
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGAS-PFLGDTKQETL 226
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 98/230 (42%), Gaps = 30/230 (13%)
Query: 105 DDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASER 164
D +L+ KD E L S L E+G+GSFG VY +D R+ +E K++
Sbjct: 42 DVAELFFKDDPEKLFSD---LREIGHGSFGAVY--FARDVRN-SEVVAIKKMSYSGKQSN 95
Query: 165 EK-AEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIME--LMGGGDLKNYLRSCRPDAE 221
EK + + E ++ + ++ G + ++ME L DL
Sbjct: 96 EKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDL------------ 143
Query: 222 TDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRD 281
+V + P I + G+AYL +HRD+ A N ++++ VK+GDFG
Sbjct: 144 LEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASI 203
Query: 282 IYETEYYRKGSRGFLPVRWMAPE---SLKDGVFTSHSDVWSYGVVLWEMA 328
+ + WMAPE ++ +G + DVWS G+ E+A
Sbjct: 204 MAPANXFVGTP------YWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 247
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 82/200 (41%), Gaps = 12/200 (6%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG GSF V L ++ + E+ I E + E VM D VKL
Sbjct: 41 LGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 98
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
Y + + G+L Y+R ET +R AE+ + Y
Sbjct: 99 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--------CTRF--YTAEIVSALEY 148
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLK 307
L K +HRDL N ++ +D+ +++ DFG + + + + ++++PE L
Sbjct: 149 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 208
Query: 308 DGVFTSHSDVWSYGVVLWEM 327
+ SD+W+ G +++++
Sbjct: 209 EKSACKSSDLWALGCIIYQL 228
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 82/200 (41%), Gaps = 12/200 (6%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG GSF V L ++ + E+ I E + E VM D VKL
Sbjct: 38 LGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
Y + + G+L Y+R ET +R AE+ + Y
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--------CTRF--YTAEIVSALEY 145
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLK 307
L K +HRDL N ++ +D+ +++ DFG + + + + ++++PE L
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 308 DGVFTSHSDVWSYGVVLWEM 327
+ SD+W+ G +++++
Sbjct: 206 EKSACKSSDLWALGCIIYQL 225
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 101/225 (44%), Gaps = 21/225 (9%)
Query: 126 DELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASER--EKAEFLNEASVMKAFDTHH 183
+ELG+G F +V + K L IK +S R + + E S++K +
Sbjct: 17 EELGSGQFAVVKKCREKS-TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
V+ L+ V ++I+EL+ GG+L ++L E+ T + ++ +
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFL----------AEKESLTEEEATEFLKQILN 125
Query: 244 GMAYLADKKFVHRDLAARNCMVAD----DLTVKVGDFGMTRDIYETEYYRKGSRGFLPVR 299
G+ YL + H DL N M+ D +K+ DFG+ I ++ + F
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPE 182
Query: 300 WMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVL 344
++APE + +D+WS GV+ + + + AS P+ G + ++ L
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGAS-PFLGDTKQETL 226
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 101/225 (44%), Gaps = 21/225 (9%)
Query: 126 DELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASER--EKAEFLNEASVMKAFDTHH 183
+ELG+G F +V + K L IK +S R + + E S++K +
Sbjct: 17 EELGSGQFAVVKKCREKS-TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
V+ L+ V ++I+EL+ GG+L ++L E+ T + ++ +
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFL----------AEKESLTEEEATEFLKQILN 125
Query: 244 GMAYLADKKFVHRDLAARNCMVAD----DLTVKVGDFGMTRDIYETEYYRKGSRGFLPVR 299
G+ YL + H DL N M+ D +K+ DFG+ I ++ + F
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPE 182
Query: 300 WMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVL 344
++APE + +D+WS GV+ + + + AS P+ G + ++ L
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGAS-PFLGDTKQETL 226
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 99/234 (42%), Gaps = 28/234 (11%)
Query: 114 SWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
WE LD+ LG GSFG V L+K + + I + ++
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIE 86
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
LNE +++A + +VKL + + ++ME + GG++ ++LR + R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--------IGRF 138
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
+R AA++ YL ++RDL N ++ ++V DFG + + +
Sbjct: 139 SEPHARF--YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT-----LASQPYQ 336
G+ +L APE + + D W+ GV+++EMA A QP Q
Sbjct: 197 XLCGTPEYL-----APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 101/225 (44%), Gaps = 21/225 (9%)
Query: 126 DELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASER--EKAEFLNEASVMKAFDTHH 183
+ELG+G F +V + K L IK +S R + + E S++K +
Sbjct: 17 EELGSGQFAVVKKCREKS-TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
V+ L+ V ++I+EL+ GG+L ++L E+ T + ++ +
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFL----------AEKESLTEEEATEFLKQILN 125
Query: 244 GMAYLADKKFVHRDLAARNCMVAD----DLTVKVGDFGMTRDIYETEYYRKGSRGFLPVR 299
G+ YL + H DL N M+ D +K+ DFG+ I ++ + F
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPE 182
Query: 300 WMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVL 344
++APE + +D+WS GV+ + + + AS P+ G + ++ L
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGAS-PFLGDTKQETL 226
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 101/225 (44%), Gaps = 21/225 (9%)
Query: 126 DELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASER--EKAEFLNEASVMKAFDTHH 183
+ELG+G F +V + K L IK +S R + + E S++K +
Sbjct: 16 EELGSGQFAVVKKCREKS-TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 74
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
V+ L+ V ++I+EL+ GG+L ++L E+ T + ++ +
Sbjct: 75 VITLHEVYENKTDVILILELVAGGELFDFL----------AEKESLTEEEATEFLKQILN 124
Query: 244 GMAYLADKKFVHRDLAARNCMVAD----DLTVKVGDFGMTRDIYETEYYRKGSRGFLPVR 299
G+ YL + H DL N M+ D +K+ DFG+ I ++ + F
Sbjct: 125 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPE 181
Query: 300 WMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVL 344
++APE + +D+WS GV+ + + + AS P+ G + ++ L
Sbjct: 182 FVAPEIVNYEPLGLEADMWSIGVITYILLSGAS-PFLGDTKQETL 225
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 82/200 (41%), Gaps = 12/200 (6%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG GSF V L ++ + E+ I E + E VM D VKL
Sbjct: 40 LGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
Y + + G+L Y+R ET +R AE+ + Y
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--------CTRF--YTAEIVSALEY 147
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLK 307
L K +HRDL N ++ +D+ +++ DFG + + + + ++++PE L
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 308 DGVFTSHSDVWSYGVVLWEM 327
+ SD+W+ G +++++
Sbjct: 208 EKSACKSSDLWALGCIIYQL 227
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 82/200 (41%), Gaps = 12/200 (6%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG GSF V L ++ + E+ I E + E VM D VKL
Sbjct: 40 LGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
Y + + G+L Y+R ET +R AE+ + Y
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--------CTRF--YTAEIVSALEY 147
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLK 307
L K +HRDL N ++ +D+ +++ DFG + + + + ++++PE L
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 308 DGVFTSHSDVWSYGVVLWEM 327
+ SD+W+ G +++++
Sbjct: 208 EKSACKSSDLWALGCIIYQL 227
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 101/225 (44%), Gaps = 21/225 (9%)
Query: 126 DELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASER--EKAEFLNEASVMKAFDTHH 183
+ELG+G F +V + K L IK +S R + + E S++K +
Sbjct: 16 EELGSGQFAVVKKCREKS-TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 74
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
V+ L+ V ++I+EL+ GG+L ++L E+ T + ++ +
Sbjct: 75 VITLHEVYENKTDVILILELVAGGELFDFL----------AEKESLTEEEATEFLKQILN 124
Query: 244 GMAYLADKKFVHRDLAARNCMVAD----DLTVKVGDFGMTRDIYETEYYRKGSRGFLPVR 299
G+ YL + H DL N M+ D +K+ DFG+ I ++ + F
Sbjct: 125 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPE 181
Query: 300 WMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVL 344
++APE + +D+WS GV+ + + + AS P+ G + ++ L
Sbjct: 182 FVAPEIVNYEPLGLEADMWSIGVITYILLSGAS-PFLGDTKQETL 225
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 82/200 (41%), Gaps = 12/200 (6%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG GSF V L ++ + E+ I E + E VM D VKL
Sbjct: 43 LGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 100
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
Y + + G+L Y+R ET +R AE+ + Y
Sbjct: 101 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--------CTRF--YTAEIVSALEY 150
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLK 307
L K +HRDL N ++ +D+ +++ DFG + + + + ++++PE L
Sbjct: 151 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 210
Query: 308 DGVFTSHSDVWSYGVVLWEM 327
+ SD+W+ G +++++
Sbjct: 211 EKSACKSSDLWALGCIIYQL 230
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHV 184
++++G G++G+VY+ K E K+ + +E + + E S++K + ++
Sbjct: 8 VEKIGEGTYGVVYKARNK---LTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 185 VKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADG 244
VKL V+ N ++ E + DLK ++ + A T + L I ++ G
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS---ALTGIP-----LPLIKSYLFQLLQG 115
Query: 245 MAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPE 304
+A+ + +HRDL +N ++ + +K+ DFG+ R R + + + + APE
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYTHEVVTLWYRAPE 173
Query: 305 SLKD-GVFTSHSDVWSYGVVLWEMAT 329
L +++ D+WS G + EM T
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHV 184
++++G G++G+VY+ K E K+ + +E + + E S++K + ++
Sbjct: 7 VEKIGEGTYGVVYKARNK---LTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 185 VKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADG 244
VKL V+ N ++ E + DLK ++ + A T + L I ++ G
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS---ALTGIP-----LPLIKSYLFQLLQG 114
Query: 245 MAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPE 304
+A+ + +HRDL +N ++ + +K+ DFG+ R R + + + + APE
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYTHEVVTLWYRAPE 172
Query: 305 SLKD-GVFTSHSDVWSYGVVLWEMAT 329
L +++ D+WS G + EM T
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 101/225 (44%), Gaps = 21/225 (9%)
Query: 126 DELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASER--EKAEFLNEASVMKAFDTHH 183
+ELG+G F +V + K L IK +S R + + E S++K +
Sbjct: 17 EELGSGQFAVVKKCREKS-TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
V+ L+ V ++I+EL+ GG+L ++L E+ T + ++ +
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFL----------AEKESLTEEEATEFLKQILN 125
Query: 244 GMAYLADKKFVHRDLAARNCMVAD----DLTVKVGDFGMTRDIYETEYYRKGSRGFLPVR 299
G+ YL + H DL N M+ D +K+ DFG+ I ++ + F
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPE 182
Query: 300 WMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVL 344
++APE + +D+WS GV+ + + + AS P+ G + ++ L
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGAS-PFLGDTKQETL 226
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 101/225 (44%), Gaps = 21/225 (9%)
Query: 126 DELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASER--EKAEFLNEASVMKAFDTHH 183
+ELG+G F +V + K L IK +S R + + E S++K +
Sbjct: 17 EELGSGKFAVVKKCREKS-TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
V+ L+ V ++I+EL+ GG+L ++L E+ T + ++ +
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFL----------AEKESLTEEEATEFLKQILN 125
Query: 244 GMAYLADKKFVHRDLAARNCMVAD----DLTVKVGDFGMTRDIYETEYYRKGSRGFLPVR 299
G+ YL + H DL N M+ D +K+ DFG+ I ++ + F
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPE 182
Query: 300 WMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVL 344
++APE + +D+WS GV+ + + + AS P+ G + ++ L
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGAS-PFLGDTKQETL 226
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 99/234 (42%), Gaps = 28/234 (11%)
Query: 114 SWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
WE LD+ LG GSFG V L+K + + I + ++
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIE 86
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
LNE +++A + +VKL + + ++ME + GG++ ++LR + R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--------IGRF 138
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
+R AA++ YL ++RDL N ++ ++V DFG + + +
Sbjct: 139 SEPHARF--YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT-----LASQPYQ 336
G+ +L APE + + D W+ GV+++EMA A QP Q
Sbjct: 197 XLCGTPEYL-----APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 98/234 (41%), Gaps = 28/234 (11%)
Query: 114 SWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
WE LD+ LG GSFG V L+K S + I + ++
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIE 86
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
LNE +++A + +VKL + + ++ME + GG++ ++LR + R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--------IGRF 138
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
+R AA++ YL ++RDL N ++ ++V DFG + + +
Sbjct: 139 SEPHARF--YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT-----LASQPYQ 336
G+ +APE + + D W+ GV+++EMA A QP Q
Sbjct: 197 XLCGT-----PEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 99/234 (42%), Gaps = 28/234 (11%)
Query: 114 SWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
WE LD+ LG GSFG V L+K + + I + ++
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIE 86
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
LNE +++A + +VKL + + ++ME + GG++ ++LR + R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--------IGRF 138
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
+R AA++ YL ++RDL N ++ ++V DFG + + +
Sbjct: 139 SEPHARF--YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT-----LASQPYQ 336
G+ +L APE + + D W+ GV+++EMA A QP Q
Sbjct: 197 XLCGTPEYL-----APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 99/234 (42%), Gaps = 28/234 (11%)
Query: 114 SWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
WE LD+ LG GSFG V L+K + + I + ++
Sbjct: 30 KWENPAQNTAHLDQFERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIE 87
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
LNE +++A + +VKL + + ++ME + GG++ ++LR + R
Sbjct: 88 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--------IGRF 139
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
+R AA++ YL ++RDL N ++ ++V DFG + + +
Sbjct: 140 SEPHARF--YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 197
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT-----LASQPYQ 336
G+ +L APE + + D W+ GV+++EMA A QP Q
Sbjct: 198 TLCGTPEYL-----APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 82/200 (41%), Gaps = 12/200 (6%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG GSF V L ++ + E+ I E + E VM D VKL
Sbjct: 40 LGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
Y + + G+L Y+R ET +R AE+ + Y
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--------CTRF--YTAEIVSALEY 147
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLK 307
L K +HRDL N ++ +D+ +++ DFG + + + + ++++PE L
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 308 DGVFTSHSDVWSYGVVLWEM 327
+ SD+W+ G +++++
Sbjct: 208 EKSAXKSSDLWALGCIIYQL 227
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 98/234 (41%), Gaps = 28/234 (11%)
Query: 114 SWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
WE LD+ LG GSFG V L+K S + I + ++
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIE 86
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
LNE +++A + +VKL + + ++ME + GG++ ++LR + R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--------IGRF 138
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
+R AA++ YL ++RDL N ++ ++V DFG + + +
Sbjct: 139 SEPHARF--YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT-----LASQPYQ 336
G+ +L AP + + D W+ GV+++EMA A QP Q
Sbjct: 197 XLCGTPEYL-----APAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 99/234 (42%), Gaps = 28/234 (11%)
Query: 114 SWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
WE LD+ LG GSFG V L+K + + I + ++
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIE 86
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
LNE +++A + +VKL + + ++ME + GG++ ++LR + R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--------IGRF 138
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
+R AA++ YL ++RDL N ++ ++V DFG + + +
Sbjct: 139 XEPHARF--YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT-----LASQPYQ 336
G+ +L APE + + D W+ GV+++EMA A QP Q
Sbjct: 197 XLCGTPEYL-----APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 82/200 (41%), Gaps = 12/200 (6%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG GSF V L ++ + E+ I E + E VM D VKL
Sbjct: 45 LGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 102
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
Y + + G+L Y+R ET +R AE+ + Y
Sbjct: 103 YFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--------CTRF--YTAEIVSALEY 152
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLK 307
L K +HRDL N ++ +D+ +++ DFG + + + + ++++PE L
Sbjct: 153 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 212
Query: 308 DGVFTSHSDVWSYGVVLWEM 327
+ SD+W+ G +++++
Sbjct: 213 EKSACKSSDLWALGCIIYQL 232
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 30/233 (12%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASV-MKAFDTHH 183
L E+G+G+ G V++ FR H A+K + ++ E L + V +K+ D +
Sbjct: 30 LGEMGSGTCGQVWK---MRFRKTG-HVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPY 85
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVER-SPPTLSRIL-QMAAEV 241
+V+ +G + MELMG +C AE +R P RIL +M +
Sbjct: 86 IVQCFGTFITNTDVFIAMELMG---------TC---AEKLKKRMQGPIPERILGKMTVAI 133
Query: 242 ADGMAYLADKK-FVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRW 300
+ YL +K +HRD+ N ++ + +K+ DFG++ + + + R +
Sbjct: 134 VKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDD---KAKDRSAGCAAY 190
Query: 301 MAPESLKDGVFTS-----HSDVWSYGVVLWEMATLASQPYQGLSNE-QVLNWV 347
MAPE + T +DVWS G+ L E+AT PY+ + +VL V
Sbjct: 191 MAPERIDPPDPTKPDYDIRADVWSLGISLVELAT-GQFPYKNCKTDFEVLTKV 242
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 99/234 (42%), Gaps = 28/234 (11%)
Query: 114 SWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
WE LD+ LG GSFG V L+K + + I + ++
Sbjct: 30 KWENPAQNTAHLDQFERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIE 87
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
LNE +++A + +VKL + + ++ME + GG++ ++LR + R
Sbjct: 88 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--------IGRF 139
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
+R AA++ YL ++RDL N ++ ++V DFG + + +
Sbjct: 140 XEPHARF--YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 197
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT-----LASQPYQ 336
G+ +L APE + + D W+ GV+++EMA A QP Q
Sbjct: 198 XLCGTPEYL-----APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 94/235 (40%), Gaps = 20/235 (8%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG G F + D + + K +REK E S+ ++ HVV
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM--EISIHRSLAHQHVVGF 104
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDA--ETDVERSPPTLSRILQMAAEVADGM 245
+G + + V++EL CR + E R T ++ G
Sbjct: 105 HGFFEDNDFVFVVLEL------------CRRRSLLELHKRRKALTEPEARYYLRQIVLGC 152
Query: 246 AYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPES 305
YL + +HRDL N + +DL VK+GDFG+ + E + RK P ++APE
Sbjct: 153 QYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKVLCGTP-NYIAPEV 210
Query: 306 LKDGVFTSHSDVWSYGVVLWEMATLASQPYQ-GLSNEQVLNWVKGKSSNEYKVNP 359
L + DVWS G +++ + + P++ E L K + S +NP
Sbjct: 211 LSKKGHSFEVDVWSIGCIMYTL-LVGKPPFETSCLKETYLRIKKNEYSIPKHINP 264
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 82/200 (41%), Gaps = 12/200 (6%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG GSF V L ++ + E+ I E + E VM D VKL
Sbjct: 40 LGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
Y + + G+L Y+R ET +R AE+ + Y
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--------CTRF--YTAEIVSALEY 147
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLK 307
L K +HRDL N ++ +D+ +++ DFG + + + + ++++PE L
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 308 DGVFTSHSDVWSYGVVLWEM 327
+ SD+W+ G +++++
Sbjct: 208 EKSACKSSDLWALGCIIYQL 227
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 98/230 (42%), Gaps = 30/230 (13%)
Query: 105 DDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASER 164
D +L+ KD E L S L E+G+GSFG VY +D R+ +E K++
Sbjct: 3 DVAELFFKDDPEKLFSD---LREIGHGSFGAVY--FARDVRN-SEVVAIKKMSYSGKQSN 56
Query: 165 EK-AEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIME--LMGGGDLKNYLRSCRPDAE 221
EK + + E ++ + ++ G + ++ME L DL
Sbjct: 57 EKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDL------------ 104
Query: 222 TDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRD 281
+V + P I + G+AYL +HRD+ A N ++++ VK+GDFG
Sbjct: 105 LEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASI 164
Query: 282 IYETEYYRKGSRGFLPVRWMAPE---SLKDGVFTSHSDVWSYGVVLWEMA 328
+ + WMAPE ++ +G + DVWS G+ E+A
Sbjct: 165 MAPANXFVGTP------YWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 208
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 99/234 (42%), Gaps = 28/234 (11%)
Query: 114 SWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
WE LD+ LG GSFG V L+K + + I + ++
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIE 86
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
LNE +++A + +VKL + + ++ME + GG++ ++LR + R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--------IGRF 138
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
+R AA++ YL ++RDL N ++ ++V DFG + + +
Sbjct: 139 XEPHARF--YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT-----LASQPYQ 336
G+ +L APE + + D W+ GV+++EMA A QP Q
Sbjct: 197 XLCGTPEYL-----APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 99/207 (47%), Gaps = 17/207 (8%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIK-VANENASEREKAEFLNEASVMKAFDTHH 183
++++G G++G+VY+ K L A+K + + +E + + E S++K + +
Sbjct: 15 VEKIGEGTYGVVYKARNK----LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
+VKL V+ N ++ E + DLK ++ + A T + L I ++
Sbjct: 71 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS---ALTGI-----PLPLIKSYLFQLLQ 121
Query: 244 GMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAP 303
G+A+ + +HRDL +N ++ + +K+ DFG+ R R + + + + AP
Sbjct: 122 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYTHEVVTLWYRAP 179
Query: 304 ESLKDGVFTSHS-DVWSYGVVLWEMAT 329
E L + S + D+WS G + EM T
Sbjct: 180 EILLGXKYYSTAVDIWSLGCIFAEMVT 206
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 94/235 (40%), Gaps = 20/235 (8%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG G F + D + + K +REK E S+ ++ HVV
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM--EISIHRSLAHQHVVGF 106
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDA--ETDVERSPPTLSRILQMAAEVADGM 245
+G + + V++EL CR + E R T ++ G
Sbjct: 107 HGFFEDNDFVFVVLEL------------CRRRSLLELHKRRKALTEPEARYYLRQIVLGC 154
Query: 246 AYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPES 305
YL + +HRDL N + +DL VK+GDFG+ + E + RK P ++APE
Sbjct: 155 QYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKVLCGTP-NYIAPEV 212
Query: 306 LKDGVFTSHSDVWSYGVVLWEMATLASQPYQ-GLSNEQVLNWVKGKSSNEYKVNP 359
L + DVWS G +++ + + P++ E L K + S +NP
Sbjct: 213 LSKKGHSFEVDVWSIGCIMYTL-LVGKPPFETSCLKETYLRIKKNEYSIPKHINP 266
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 101/225 (44%), Gaps = 21/225 (9%)
Query: 126 DELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASER--EKAEFLNEASVMKAFDTHH 183
+ELG+G F +V + K L IK +S R + + E S++K +
Sbjct: 17 EELGSGQFAVVKKCREKS-TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
V+ L+ V ++I+EL+ GG+L ++L E+ T + ++ +
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFL----------AEKESLTEEEATEFLKQILN 125
Query: 244 GMAYLADKKFVHRDLAARNCMVAD----DLTVKVGDFGMTRDIYETEYYRKGSRGFLPVR 299
G+ YL + H DL N M+ D +K+ DFG+ I ++ + F
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPE 182
Query: 300 WMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVL 344
++APE + +D+WS GV+ + + + AS P+ G + ++ L
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGAS-PFLGDTKQETL 226
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 99/234 (42%), Gaps = 28/234 (11%)
Query: 114 SWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
WE LD+ LG GSFG V L+K + + I + ++
Sbjct: 22 KWESPAQNTAHLDQFERIKTLGTGSFGRVM--LVKHKETGNHYAMKILDKQKVVKLKQIE 79
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
LNE +++A + +VKL + + ++ME + GG++ ++LR + R
Sbjct: 80 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--------IGRF 131
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
+R AA++ YL ++RDL N ++ ++V DFG + + +
Sbjct: 132 SEPHARF--YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 189
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT-----LASQPYQ 336
G+ +L APE + + D W+ GV+++EMA A QP Q
Sbjct: 190 XLCGTPEYL-----APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 238
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 101/225 (44%), Gaps = 21/225 (9%)
Query: 126 DELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASER--EKAEFLNEASVMKAFDTHH 183
+ELG+G F +V + K L IK +S R + + E S++K +
Sbjct: 17 EELGSGQFAVVKKCREKS-TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
V+ L+ V ++I+EL+ GG+L ++L E+ T + ++ +
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFL----------AEKESLTEEEATEFLKQILN 125
Query: 244 GMAYLADKKFVHRDLAARNCMVAD----DLTVKVGDFGMTRDIYETEYYRKGSRGFLPVR 299
G+ YL + H DL N M+ D +K+ DFG+ I ++ + F
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPA 182
Query: 300 WMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVL 344
++APE + +D+WS GV+ + + + AS P+ G + ++ L
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGAS-PFLGDTKQETL 226
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHV 184
++++G G++G+VY+ K E K+ + +E + + E S++K + ++
Sbjct: 8 VEKIGEGTYGVVYKARNK---LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 185 VKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADG 244
VKL V+ N ++ E + DLK ++ + A T + L I ++ G
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS---ALTGIP-----LPLIKSYLFQLLQG 115
Query: 245 MAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPE 304
+A+ + +HRDL +N ++ + +K+ DFG+ R R + + + + APE
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYTHEVVTLWYRAPE 173
Query: 305 SLKD-GVFTSHSDVWSYGVVLWEMAT 329
L +++ D+WS G + EM T
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHV 184
++++G G++G+VY+ K E K+ + +E + + E S++K + ++
Sbjct: 7 VEKIGEGTYGVVYKARNK---LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 185 VKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADG 244
VKL V+ N ++ E + DLK ++ + A T + L I ++ G
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS---ALTGIP-----LPLIKSYLFQLLQG 114
Query: 245 MAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPE 304
+A+ + +HRDL +N ++ + +K+ DFG+ R R + + + + APE
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYTHEVVTLWYRAPE 172
Query: 305 SLKD-GVFTSHSDVWSYGVVLWEMAT 329
L +++ D+WS G + EM T
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 99/234 (42%), Gaps = 28/234 (11%)
Query: 114 SWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
WE LD+ LG GSFG V L+K + + I + ++
Sbjct: 50 KWESPAQNTAHLDQFERIKTLGTGSFGRVM--LVKHKETGNHYAMKILDKQKVVKLKQIE 107
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
LNE +++A + +VKL + + ++ME + GG++ ++LR + R
Sbjct: 108 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--------IGRF 159
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
+R AA++ YL ++RDL N ++ ++V DFG + + +
Sbjct: 160 SEPHARF--YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 217
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT-----LASQPYQ 336
G+ +L APE + + D W+ GV+++EMA A QP Q
Sbjct: 218 XLCGTPEYL-----APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 266
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 99/207 (47%), Gaps = 17/207 (8%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIK-VANENASEREKAEFLNEASVMKAFDTHH 183
++++G G++G+VY+ K L A+K + + +E + + E S++K + +
Sbjct: 8 VEKIGEGTYGVVYKARNK----LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
+VKL V+ N ++ E + DLK ++ + A T + L I ++
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS---ALTGIP-----LPLIKSYLFQLLQ 114
Query: 244 GMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAP 303
G+A+ + +HRDL +N ++ + +K+ DFG+ R R + + + + AP
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYTHEVVTLWYRAP 172
Query: 304 ESLKDGVFTSHS-DVWSYGVVLWEMAT 329
E L + S + D+WS G + EM T
Sbjct: 173 EILLGXKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHV 184
++++G G++G+VY+ K E K+ + +E + + E S++K + ++
Sbjct: 7 VEKIGEGTYGVVYKARNK---LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 185 VKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADG 244
VKL V+ N ++ E + DLK ++ + A T + L I ++ G
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS---ALTGIP-----LPLIKSYLFQLLQG 114
Query: 245 MAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPE 304
+A+ + +HRDL +N ++ + +K+ DFG+ R R + + + + APE
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYTHEVVTLWYRAPE 172
Query: 305 SLKD-GVFTSHSDVWSYGVVLWEMAT 329
L +++ D+WS G + EM T
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 99/234 (42%), Gaps = 28/234 (11%)
Query: 114 SWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
WE LD+ LG GSFG V L+K + + I + ++
Sbjct: 22 KWESPAQNTAHLDQFERIKTLGTGSFGRVM--LVKHKETGNHYAMKILDKQKVVKLKQIE 79
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
LNE +++A + +VKL + + ++ME + GG++ ++LR + R
Sbjct: 80 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--------IGRF 131
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
+R AA++ YL ++RDL N ++ ++V DFG + + +
Sbjct: 132 XEPHARF--YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 189
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT-----LASQPYQ 336
G+ +L APE + + D W+ GV+++EMA A QP Q
Sbjct: 190 XLCGTPEYL-----APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 238
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHV 184
++++G G++G+VY+ K E K+ + +E + + E S++K + ++
Sbjct: 8 VEKIGEGTYGVVYKARNK---LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 185 VKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADG 244
VKL V+ N ++ E + DLK ++ + A T + L I ++ G
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS---ALTGIP-----LPLIKSYLFQLLQG 115
Query: 245 MAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPE 304
+A+ + +HRDL +N ++ + +K+ DFG+ R R + + + + APE
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYTHEVVTLWYRAPE 173
Query: 305 SLKD-GVFTSHSDVWSYGVVLWEMAT 329
L +++ D+WS G + EM T
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 99/207 (47%), Gaps = 17/207 (8%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIK-VANENASEREKAEFLNEASVMKAFDTHH 183
++++G G++G+VY+ K L A+K + + +E + + E S++K + +
Sbjct: 15 VEKIGEGTYGVVYKARNK----LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
+VKL V+ N ++ E + DLK ++ + A T + L I ++
Sbjct: 71 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS---ALTGI-----PLPLIKSYLFQLLQ 121
Query: 244 GMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAP 303
G+A+ + +HRDL +N ++ + +K+ DFG+ R R + + + + AP
Sbjct: 122 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYTHEVVTLWYRAP 179
Query: 304 ESLKDGVFTSHS-DVWSYGVVLWEMAT 329
E L + S + D+WS G + EM T
Sbjct: 180 EILLGCKYYSTAVDIWSLGCIFAEMVT 206
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 99/207 (47%), Gaps = 17/207 (8%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIK-VANENASEREKAEFLNEASVMKAFDTHH 183
++++G G++G+VY+ K L A+K + + +E + + E S++K + +
Sbjct: 9 VEKIGEGTYGVVYKARNK----LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
+VKL V+ N ++ E + DLK ++ + A T + L I ++
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS---ALTGIP-----LPLIKSYLFQLLQ 115
Query: 244 GMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAP 303
G+A+ + +HRDL +N ++ + +K+ DFG+ R R + + + + AP
Sbjct: 116 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYTHEVVTLWYRAP 173
Query: 304 ESLKDGVFTSHS-DVWSYGVVLWEMAT 329
E L + S + D+WS G + EM T
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 99/234 (42%), Gaps = 28/234 (11%)
Query: 114 SWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
WE LD+ LG GSFG V L+K + + I + ++
Sbjct: 30 KWESPAQNTAHLDQFERIKTLGTGSFGRVM--LVKHKETGNHYAMKILDKQKVVKLKQIE 87
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
LNE +++A + +VKL + + ++ME + GG++ ++LR + R
Sbjct: 88 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--------IGRF 139
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
+R AA++ YL ++RDL N ++ ++V DFG + + +
Sbjct: 140 SEPHARF--YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 197
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT-----LASQPYQ 336
G+ +L APE + + D W+ GV+++EMA A QP Q
Sbjct: 198 XLCGTPEYL-----APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 101/225 (44%), Gaps = 21/225 (9%)
Query: 126 DELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASER--EKAEFLNEASVMKAFDTHH 183
+ELG+G F +V + K L IK +S R + + E S++K +
Sbjct: 17 EELGSGVFAVVKKCREKS-TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
V+ L+ V ++I+EL+ GG+L ++L E+ T + ++ +
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFL----------AEKESLTEEEATEFLKQILN 125
Query: 244 GMAYLADKKFVHRDLAARNCMVAD----DLTVKVGDFGMTRDIYETEYYRKGSRGFLPVR 299
G+ YL + H DL N M+ D +K+ DFG+ I ++ + F
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPE 182
Query: 300 WMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVL 344
++APE + +D+WS GV+ + + + AS P+ G + ++ L
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGAS-PFLGDTKQETL 226
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 99/234 (42%), Gaps = 28/234 (11%)
Query: 114 SWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
WE LD+ LG GSFG V L+K + + I + ++
Sbjct: 30 KWESPAQNTAHLDQFERIKTLGTGSFGRVM--LVKHKETGNHYAMKILDKQKVVKLKQIE 87
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
LNE +++A + +VKL + + ++ME + GG++ ++LR + R
Sbjct: 88 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--------IGRF 139
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
+R AA++ YL ++RDL N ++ ++V DFG + + +
Sbjct: 140 SEPHARF--YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 197
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT-----LASQPYQ 336
G+ +L APE + + D W+ GV+++EMA A QP Q
Sbjct: 198 XLCGTPEYL-----APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 101/225 (44%), Gaps = 21/225 (9%)
Query: 126 DELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASER--EKAEFLNEASVMKAFDTHH 183
+ELG+G F +V + K L IK +S R + + E S++K +
Sbjct: 17 EELGSGQFAVVKKCREKS-TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
V+ L+ V ++I+EL+ GG+L ++L E+ T + ++ +
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFL----------AEKESLTEEEATEFLKQILN 125
Query: 244 GMAYLADKKFVHRDLAARNCMVAD----DLTVKVGDFGMTRDIYETEYYRKGSRGFLPVR 299
G+ YL + H DL N M+ D +K+ DFG+ I ++ + F
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPE 182
Query: 300 WMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVL 344
++APE + +D+WS GV+ + + + AS P+ G + ++ L
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGAS-PFLGDTKQETL 226
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 84/175 (48%), Gaps = 14/175 (8%)
Query: 153 AIKVANENASEREKAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNY 212
AIK+ ++N + E +K H+ +LY V+ N +++E GG+L +Y
Sbjct: 39 AIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDY 98
Query: 213 LRSCRPDAETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVK 272
+ S +R +R++ ++ +AY+ + + HRDL N + + +K
Sbjct: 99 IIS--------QDRLSEEETRVV--FRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLK 148
Query: 273 VGDFGM-TRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFT-SHSDVWSYGVVLW 325
+ DFG+ + +Y+ + G L + APE ++ + S +DVWS G++L+
Sbjct: 149 LIDFGLCAKPKGNKDYHLQTCCGSLA--YAAPELIQGKSYLGSEADVWSMGILLY 201
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 100/224 (44%), Gaps = 44/224 (19%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEH-----PCAIKVANE---NASEREKAEFLNEASVMKAF 179
+G G+F V LA H A+K+ ++ N + +K E +MK
Sbjct: 23 IGKGNFAKV---------KLARHVLTGREVAVKIIDKTQLNPTSLQK--LFREVRIMKIL 71
Query: 180 DTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAA 239
+ ++VKL+ V+ ++ME GG++ +YL + E + ++ Q+ +
Sbjct: 72 NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEAR------AKFRQIVS 125
Query: 240 EVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSR-----G 294
V Y K VHRDL A N ++ D+ +K+ DFG + + + G++ G
Sbjct: 126 AVQ----YCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNE------FTVGNKLDTFCG 175
Query: 295 FLPVRWMAPESLKDGVFTS-HSDVWSYGVVLWEMATLASQPYQG 337
P + APE + + DVWS GV+L+ + + S P+ G
Sbjct: 176 SPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDG 216
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 14/201 (6%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG GSF V L ++ + E+ I E + E VM D VKL
Sbjct: 40 LGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
Y + + G L Y+R ET +R AE+ + Y
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDET--------CTRF--YTAEIVSALEY 147
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFL-PVRWMAPESL 306
L K +HRDL N ++ +D+ +++ DFG T + E + + F+ ++++PE L
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANSFVGTAQYVSPELL 206
Query: 307 KDGVFTSHSDVWSYGVVLWEM 327
+ + SD+W+ G +++++
Sbjct: 207 TEKSASKSSDLWALGCIIYQL 227
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 99/234 (42%), Gaps = 28/234 (11%)
Query: 114 SWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
WE LD+ LG GSFG V L+K + + I + ++
Sbjct: 30 KWESPAQNTAHLDQFERIKTLGTGSFGRVM--LVKHKETGNHYAMKILDKQKVVKLKQIE 87
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
LNE +++A + +VKL + + ++ME + GG++ ++LR + R
Sbjct: 88 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--------IGRF 139
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
+R AA++ YL ++RDL N ++ ++V DFG + + +
Sbjct: 140 SEPHARF--YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 197
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT-----LASQPYQ 336
G+ +L APE + + D W+ GV+++EMA A QP Q
Sbjct: 198 XLCGTPEYL-----APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHV 184
++++G G++G+VY+ K E K+ + +E + + E S++K + ++
Sbjct: 12 VEKIGEGTYGVVYKARNK---LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 185 VKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADG 244
VKL V+ N ++ E + DLK ++ + A T + L I ++ G
Sbjct: 69 VKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS---ALTGI-----PLPLIKSYLFQLLQG 119
Query: 245 MAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPE 304
+A+ + +HRDL +N ++ + +K+ DFG+ R R + + + + APE
Sbjct: 120 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYTHEVVTLWYRAPE 177
Query: 305 SLKD-GVFTSHSDVWSYGVVLWEMAT 329
L +++ D+WS G + EM T
Sbjct: 178 ILLGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHV 184
++++G G++G+VY+ K E K+ + +E + + E S++K + ++
Sbjct: 11 VEKIGEGTYGVVYKARNK---LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 185 VKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADG 244
VKL V+ N ++ E + DLK+++ + A T + L I ++ G
Sbjct: 68 VKLLDVIHTENKLYLVFEFLSM-DLKDFMDAS---ALTGIP-----LPLIKSYLFQLLQG 118
Query: 245 MAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPE 304
+A+ + +HRDL +N ++ + +K+ DFG+ R R + + + APE
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYXHEVVTLWYRAPE 176
Query: 305 SLKDGVFTSHS-DVWSYGVVLWEMAT 329
L + S + D+WS G + EM T
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 99/207 (47%), Gaps = 17/207 (8%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIK-VANENASEREKAEFLNEASVMKAFDTHH 183
++++G G++G+VY+ K L A+K + + +E + + E S++K + +
Sbjct: 10 VEKIGEGTYGVVYKARNK----LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
+VKL V+ N ++ E + DLK+++ + A T + L I ++
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLSM-DLKDFMDAS---ALTGIP-----LPLIKSYLFQLLQ 116
Query: 244 GMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAP 303
G+A+ + +HRDL +N ++ + +K+ DFG+ R R + + + AP
Sbjct: 117 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYXHEVVTLWYRAP 174
Query: 304 ESLKD-GVFTSHSDVWSYGVVLWEMAT 329
E L +++ D+WS G + EM T
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 98/207 (47%), Gaps = 17/207 (8%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIK-VANENASEREKAEFLNEASVMKAFDTHH 183
++++G G++G+VY+ K L A+K + + +E + + E S++K + +
Sbjct: 11 VEKIGEGTYGVVYKARNK----LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
+VKL V+ N ++ E + DLK ++ + A T + L I ++
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS---ALTGI-----PLPLIKSYLFQLLQ 117
Query: 244 GMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAP 303
G+A+ + +HRDL +N ++ + +K+ DFG+ R R + + + AP
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYXHEVVTLWYRAP 175
Query: 304 ESLKDGVFTSHS-DVWSYGVVLWEMAT 329
E L + S + D+WS G + EM T
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 98/207 (47%), Gaps = 17/207 (8%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIK-VANENASEREKAEFLNEASVMKAFDTHH 183
++++G G++G+VY+ K L A+K + + +E + + E S++K + +
Sbjct: 10 VEKIGEGTYGVVYKARNK----LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
+VKL V+ N ++ E + DLK ++ + A T + L I ++
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS---ALTGI-----PLPLIKSYLFQLLQ 116
Query: 244 GMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAP 303
G+A+ + +HRDL +N ++ + +K+ DFG+ R R + + + AP
Sbjct: 117 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYXHEVVTLWYRAP 174
Query: 304 ESLKDGVFTSHS-DVWSYGVVLWEMAT 329
E L + S + D+WS G + EM T
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHV 184
++++G G++G+VY+ K E K+ + +E + + E S++K + ++
Sbjct: 8 VEKIGEGTYGVVYKARNK---LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 185 VKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADG 244
VKL V+ N ++ E + DLK ++ + A T + L I ++ G
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS---ALTGI-----PLPLIKSYLFQLLQG 115
Query: 245 MAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPE 304
+A+ + +HRDL +N ++ + +K+ DFG+ R R + + + APE
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYXHEVVTLWYRAPE 173
Query: 305 SLKD-GVFTSHSDVWSYGVVLWEMAT 329
L +++ D+WS G + EM T
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHV 184
++++G G++G+VY+ K E K+ + +E + + E S++K + ++
Sbjct: 12 VEKIGEGTYGVVYKARNK---LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 185 VKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADG 244
VKL V+ N ++ E + DLK ++ + A T + L I ++ G
Sbjct: 69 VKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS---ALTGI-----PLPLIKSYLFQLLQG 119
Query: 245 MAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPE 304
+A+ + +HRDL +N ++ + +K+ DFG+ R R + + + APE
Sbjct: 120 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYXHEVVTLWYRAPE 177
Query: 305 SLKDGVFTSHS-DVWSYGVVLWEMAT 329
L + S + D+WS G + EM T
Sbjct: 178 ILLGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 98/207 (47%), Gaps = 17/207 (8%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIK-VANENASEREKAEFLNEASVMKAFDTHH 183
++++G G++G+VY+ K L A+K + + +E + + E S++K + +
Sbjct: 11 VEKIGEGTYGVVYKARNK----LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
+VKL V+ N ++ E + DLK ++ + A T + L I ++
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLHQ-DLKTFMDAS---ALTGIP-----LPLIKSYLFQLLQ 117
Query: 244 GMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAP 303
G+A+ + +HRDL +N ++ + +K+ DFG+ R R + + + AP
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYXHEVVTLWYRAP 175
Query: 304 ESLKD-GVFTSHSDVWSYGVVLWEMAT 329
E L +++ D+WS G + EM T
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHV 184
++++G G++G+VY+ K E K+ + +E + + E S++K + ++
Sbjct: 11 VEKIGEGTYGVVYKARNK---LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 185 VKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADG 244
VKL V+ N ++ E + DLK ++ + A T + L I ++ G
Sbjct: 68 VKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS---ALTGI-----PLPLIKSYLFQLLQG 118
Query: 245 MAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPE 304
+A+ + +HRDL +N ++ + +K+ DFG+ R R + + + APE
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYXHEVVTLWYRAPE 176
Query: 305 SLKD-GVFTSHSDVWSYGVVLWEMAT 329
L +++ D+WS G + EM T
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHV 184
++++G G++G+VY+ K E K+ + +E + + E S++K + ++
Sbjct: 7 VEKIGEGTYGVVYKARNK---LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 185 VKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADG 244
VKL V+ N ++ E + DLK ++ + A T + L I ++ G
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS---ALTGI-----PLPLIKSYLFQLLQG 114
Query: 245 MAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPE 304
+A+ + +HRDL +N ++ + +K+ DFG+ R R + + + APE
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYXHEVVTLWYRAPE 172
Query: 305 SLKD-GVFTSHSDVWSYGVVLWEMAT 329
L +++ D+WS G + EM T
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 81/200 (40%), Gaps = 12/200 (6%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG GSF L ++ + E+ I E + E VM D VKL
Sbjct: 38 LGEGSFSTTV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
Y + + G+L Y+R ET +R AE+ + Y
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--------CTRF--YTAEIVSALEY 145
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLK 307
L K +HRDL N ++ +D+ +++ DFG + + + + ++++PE L
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 308 DGVFTSHSDVWSYGVVLWEM 327
+ SD+W+ G +++++
Sbjct: 206 EKSACKSSDLWALGCIIYQL 225
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHV 184
++++G G++G+VY+ K E K+ + +E + + E S++K + ++
Sbjct: 9 VEKIGEGTYGVVYKARNK---LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 185 VKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADG 244
VKL V+ N ++ E + DLK ++ + A T + L I ++ G
Sbjct: 66 VKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS---ALTGIP-----LPLIKSYLFQLLQG 116
Query: 245 MAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPE 304
+A+ + +HRDL +N ++ + +K+ DFG+ R R + + + APE
Sbjct: 117 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYXHEVVTLWYRAPE 174
Query: 305 SLKDGVFTSHS-DVWSYGVVLWEMAT 329
L + S + D+WS G + EM T
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHV 184
++++G G++G+VY+ K E K+ + +E + + E S++K + ++
Sbjct: 10 VEKIGEGTYGVVYKARNK---LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 185 VKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADG 244
VKL V+ N ++ E + DLK ++ + A T + L I ++ G
Sbjct: 67 VKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS---ALTGI-----PLPLIKSYLFQLLQG 117
Query: 245 MAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPE 304
+A+ + +HRDL +N ++ + +K+ DFG+ R R + + + APE
Sbjct: 118 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYXHEVVTLWYRAPE 175
Query: 305 SLKDGVFTSHS-DVWSYGVVLWEMAT 329
L + S + D+WS G + EM T
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 23/219 (10%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHH--VV 185
LG G FG VY K + A+KV ++ E+E E + HH ++
Sbjct: 31 LGKGKFGNVYLAREKKSHFIV----ALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNIL 86
Query: 186 KLYGVVSEGNPTLVIMELMGGGDL-KNYLRSCRPDAETDVERSPPTLSRILQMAAEVADG 244
+LY + +I+E G+L K +SC D + R + E+AD
Sbjct: 87 RLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQ-----------RTATIMEELADA 135
Query: 245 MAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPE 304
+ Y KK +HRD+ N ++ +K+ DFG + ++ RK G L ++ PE
Sbjct: 136 LMYCHGKKVIHRDIKPENLLLGLKGELKIADFGWS--VHAPSLRRKTMCGTL--DYLPPE 191
Query: 305 SLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
++ + D+W GV+ +E+ + + P++ S+ +
Sbjct: 192 MIEGRMHNEKVDLWCIGVLCYEL-LVGNPPFESASHNET 229
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 102/236 (43%), Gaps = 32/236 (13%)
Query: 114 SWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
WE LD+ LG GSFG R ++ + H A+K+ ++ + K
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFG---RVMLVKHKETGNH-FAMKILDKQKVVKLKQ 84
Query: 168 --EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVE 225
LNE +++A + +VKL + + ++ME + GG++ ++LR +
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRR--------IG 136
Query: 226 RSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
R +R AA++ YL ++RDL N ++ ++V DFG + +
Sbjct: 137 RFSEPHARF--YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194
Query: 286 EYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT-----LASQPYQ 336
+ G+ +L APE + + D W+ GV+++EMA A QP Q
Sbjct: 195 TWXLCGTPEYL-----APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 98/207 (47%), Gaps = 17/207 (8%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIK-VANENASEREKAEFLNEASVMKAFDTHH 183
++++G G++G+VY+ K L A+K + + +E + + E S++K + +
Sbjct: 8 VEKIGEGTYGVVYKARNK----LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
+VKL V+ N ++ E + DLK ++ + A T + L I ++
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS---ALTGI-----PLPLIKSYLFQLLQ 114
Query: 244 GMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAP 303
G+A+ + +HRDL +N ++ + +K+ DFG+ R R + + + AP
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYXHEVVTLWYRAP 172
Query: 304 ESLKD-GVFTSHSDVWSYGVVLWEMAT 329
E L +++ D+WS G + EM T
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHV 184
++++G G++G+VY+ K E K+ + +E + + E S++K + ++
Sbjct: 8 VEKIGEGTYGVVYKARNK---LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 185 VKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADG 244
VKL V+ N ++ E + DLK ++ + A T + L I ++ G
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS---ALTGI-----PLPLIKSYLFQLLQG 115
Query: 245 MAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPE 304
+A+ + +HRDL +N ++ + +K+ DFG+ R R + + + APE
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYXHEVVTLWYRAPE 173
Query: 305 SLKDGVFTSHS-DVWSYGVVLWEMAT 329
L + S + D+WS G + EM T
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHV 184
++++G G++G+VY+ K E K+ + +E + + E S++K + ++
Sbjct: 8 VEKIGEGTYGVVYKARNK---LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 185 VKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADG 244
VKL V+ N ++ E + DLK ++ + A T + L I ++ G
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS---ALTGI-----PLPLIKSYLFQLLQG 115
Query: 245 MAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPE 304
+A+ + +HRDL +N ++ + +K+ DFG+ R R + + + APE
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYXHEVVTLWYRAPE 173
Query: 305 SLKD-GVFTSHSDVWSYGVVLWEMAT 329
L +++ D+WS G + EM T
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 97/234 (41%), Gaps = 28/234 (11%)
Query: 114 SWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
WE LD+ LG GSFG V L+K + + I + ++
Sbjct: 30 KWESPAQNTAHLDQFERIRTLGTGSFGRVM--LVKHKETGNHYAMKILDKQKVVKLKQIE 87
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERS 227
LNE + +A + +VKL + + +++E GG++ ++LR + R
Sbjct: 88 HTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRR--------IGRF 139
Query: 228 PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
+R AA++ YL ++RDL N ++ +KV DFG + + +
Sbjct: 140 SEPHARF--YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTW 197
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT-----LASQPYQ 336
G+ +L APE + + D W+ GV+++EMA A QP Q
Sbjct: 198 XLCGTPEYL-----APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 102/236 (43%), Gaps = 32/236 (13%)
Query: 114 SWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
WE LD+ LG GSFG R ++ + H A+K+ ++ + K
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFG---RVMLVKHKETGNH-FAMKILDKQKVVKLKQ 84
Query: 168 --EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVE 225
LNE +++A + +VKL + + ++ME + GG++ ++LR +
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRR--------IG 136
Query: 226 RSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
R +R AA++ YL ++RDL N ++ ++V DFG + +
Sbjct: 137 RFSEPHARF--YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194
Query: 286 EYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT-----LASQPYQ 336
+ G+ +L APE + + D W+ GV+++EMA A QP Q
Sbjct: 195 TWXLCGTPEYL-----APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHV 184
++++G G++G+VY+ K E K+ + +E + + E S++K + ++
Sbjct: 8 VEKIGEGTYGVVYKARNK---LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 185 VKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADG 244
VKL V+ N ++ E + DLK+++ + A T + L I ++ G
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQ-DLKDFMDAS---ALTGI-----PLPLIKSYLFQLLQG 115
Query: 245 MAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPE 304
+A+ + +HRDL N ++ + +K+ DFG+ R R + + + APE
Sbjct: 116 LAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVP--VRTYXHEVVTLWYRAPE 173
Query: 305 SLKD-GVFTSHSDVWSYGVVLWEMAT 329
L +++ D+WS G + EM T
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHV 184
++++G G++G+VY+ K E K+ + +E + + E S++K + ++
Sbjct: 7 VEKIGEGTYGVVYKARNK---LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 185 VKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADG 244
VKL V+ N ++ E + DLK ++ + A T + L I ++ G
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS---ALTGI-----PLPLIKSYLFQLLQG 114
Query: 245 MAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPE 304
+A+ + +HRDL +N ++ + +K+ DFG+ R R + + + APE
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYXHEVVTLWYRAPE 172
Query: 305 SLKD-GVFTSHSDVWSYGVVLWEMAT 329
L +++ D+WS G + EM T
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 102/236 (43%), Gaps = 32/236 (13%)
Query: 114 SWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKA 167
WE LD+ LG GSFG R ++ + H A+K+ ++ + K
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFG---RVMLVKHKETGNH-FAMKILDKQKVVKLKQ 84
Query: 168 --EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVE 225
LNE +++A + +VKL + + ++ME + GG++ ++LR +
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRR--------IG 136
Query: 226 RSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
R +R AA++ YL ++RDL N ++ ++V DFG + +
Sbjct: 137 RFSEPHARF--YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194
Query: 286 EYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT-----LASQPYQ 336
+ G+ +L APE + + D W+ GV+++EMA A QP Q
Sbjct: 195 TWXLCGTPEYL-----APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHV 184
++++G G++G+VY+ K E K+ + +E + + E S++K + ++
Sbjct: 8 VEKIGEGTYGVVYKARNK---LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 185 VKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADG 244
VKL V+ N ++ E + DLK ++ + A T + L I ++ G
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS---ALTGIP-----LPLIKSYLFQLLQG 115
Query: 245 MAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPE 304
+++ + +HRDL +N ++ + +K+ DFG+ R R + + + + APE
Sbjct: 116 LSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYTHEVVTLWYRAPE 173
Query: 305 SLKDGVFTSHS-DVWSYGVVLWEMAT 329
L + S + D+WS G + EM T
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHV 184
++++G G++G+VY+ K E K+ + +E + + E S++K + ++
Sbjct: 9 VEKIGEGTYGVVYKARNK---LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 185 VKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADG 244
VKL V+ N ++ E + DLK ++ + A T + L I ++ G
Sbjct: 66 VKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS---ALTGI-----PLPLIKSYLFQLLQG 116
Query: 245 MAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPE 304
+A+ + +HRDL +N ++ + +K+ DFG+ R R + + + APE
Sbjct: 117 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYXHEVVTLWYRAPE 174
Query: 305 SLKDGVFTSHS-DVWSYGVVLWEMAT 329
L + S + D+WS G + EM T
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 100/225 (44%), Gaps = 21/225 (9%)
Query: 126 DELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASER--EKAEFLNEASVMKAFDTHH 183
+ELG+G F +V + K L IK +S R + + E S++K +
Sbjct: 17 EELGSGQFAVVKKCREKS-TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
V+ L+ V ++I EL+ GG+L ++L E+ T + ++ +
Sbjct: 76 VITLHEVYENKTDVILIGELVAGGELFDFL----------AEKESLTEEEATEFLKQILN 125
Query: 244 GMAYLADKKFVHRDLAARNCMVAD----DLTVKVGDFGMTRDIYETEYYRKGSRGFLPVR 299
G+ YL + H DL N M+ D +K+ DFG+ I ++ + F
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPE 182
Query: 300 WMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVL 344
++APE + +D+WS GV+ + + + AS P+ G + ++ L
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGAS-PFLGDTKQETL 226
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 97/207 (46%), Gaps = 17/207 (8%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIK-VANENASEREKAEFLNEASVMKAFDTHH 183
++++G G++G+VY+ K L A+K + + +E + + E S++K + +
Sbjct: 11 VEKIGEGTYGVVYKARNK----LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
+VKL V+ N ++ E + DLK ++ + A T + L I ++
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLSM-DLKKFMDAS---ALTGI-----PLPLIKSYLFQLLQ 117
Query: 244 GMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAP 303
G+A+ + +HRDL N ++ + +K+ DFG+ R R + + + AP
Sbjct: 118 GLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVP--VRTYXHEVVTLWYRAP 175
Query: 304 ESLKD-GVFTSHSDVWSYGVVLWEMAT 329
E L +++ D+WS G + EM T
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHV 184
++++G G++G+VY+ K E K+ + +E + + E S++K + ++
Sbjct: 9 VEKIGEGTYGVVYKARNK---LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 185 VKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADG 244
VKL V+ N ++ E + DLK ++ + A T + L I ++ G
Sbjct: 66 VKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS---ALTGI-----PLPLIKSYLFQLLQG 116
Query: 245 MAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPE 304
+A+ + +HRDL N ++ + +K+ DFG+ R R + + + APE
Sbjct: 117 LAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVP--VRTYXHEVVTLWYRAPE 174
Query: 305 SLKDGVFTSHS-DVWSYGVVLWEMAT 329
L + S + D+WS G + EM T
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHV 184
++++G G++G+VY+ K E K+ + +E + + E S++K + ++
Sbjct: 10 VEKIGEGTYGVVYKARNK---LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 185 VKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADG 244
VKL V+ N ++ E + DLK ++ + A T + L I ++ G
Sbjct: 67 VKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS---ALTGI-----PLPLIKSYLFQLLQG 117
Query: 245 MAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPE 304
+A+ + +HRDL N ++ + +K+ DFG+ R R + + + APE
Sbjct: 118 LAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVP--VRTYXHEVVTLWYRAPE 175
Query: 305 SLKDGVFTSHS-DVWSYGVVLWEMAT 329
L + S + D+WS G + EM T
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 97/207 (46%), Gaps = 17/207 (8%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIK-VANENASEREKAEFLNEASVMKAFDTHH 183
++++G G++G+VY+ K L A+K + + +E + + E S++K + +
Sbjct: 9 VEKIGEGTYGVVYKARNK----LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
+VKL V+ N ++ E + DLK ++ + A T + L I ++
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLSM-DLKKFMDAS---ALTGI-----PLPLIKSYLFQLLQ 115
Query: 244 GMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAP 303
G+A+ + +HRDL N ++ + +K+ DFG+ R R + + + AP
Sbjct: 116 GLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVP--VRTYXHEVVTLWYRAP 173
Query: 304 ESLKD-GVFTSHSDVWSYGVVLWEMAT 329
E L +++ D+WS G + EM T
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 29/205 (14%)
Query: 127 ELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVK 186
ELG G+ +VYR K + P A+KV + +K E V+ +++K
Sbjct: 60 ELGRGATSIVYRCKQKG----TQKPYALKVLKKTV---DKKIVRTEIGVLLRLSHPNIIK 112
Query: 187 LYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMA 246
L + +++EL+ GG+L + + VE+ + ++ + +A
Sbjct: 113 LKEIFETPTEISLVLELVTGGELFDRI----------VEKGYYSERDAADAVKQILEAVA 162
Query: 247 YLADKKFVHRDLAARNCMVAD---DLTVKVGDFGMTRDIYETEYYRK---GSRGFLPVRW 300
YL + VHRDL N + A D +K+ DFG+++ I E + K G+ G+
Sbjct: 163 YLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSK-IVEHQVLMKTVCGTPGYC---- 217
Query: 301 MAPESLKDGVFTSHSDVWSYGVVLW 325
APE L+ + D+WS G++ +
Sbjct: 218 -APEILRGCAYGPEVDMWSVGIITY 241
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHV 184
++++G G++G+VY+ K E K+ + +E + + E S++K + ++
Sbjct: 7 VEKIGEGTYGVVYKARNK---LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 185 VKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADG 244
VKL V+ N ++ E + DLK ++ + A T + L I ++ G
Sbjct: 64 VKLLDVIHTENKLYLVFEHVHQ-DLKTFMDAS---ALTGIP-----LPLIKSYLFQLLQG 114
Query: 245 MAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPE 304
+A+ + +HRDL +N ++ + +K+ DFG+ R R + + + + APE
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYTHEVVTLWYRAPE 172
Query: 305 SLKD-GVFTSHSDVWSYGVVLWEMAT 329
L +++ D+WS G + EM T
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 104/238 (43%), Gaps = 27/238 (11%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENA--SEREKAEFL 170
D++E +R LG GSFG V +K+ L A+KV ++ + + +
Sbjct: 23 DNFEFIRV-------LGKGSFGKVMLARVKETGDLY----AVKVLKKDVILQDDDVECTM 71
Query: 171 NEASVMKAFDTH-HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPP 229
E ++ H + +L+ + +ME + GGDL +++ R E
Sbjct: 72 TEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDE-------- 123
Query: 230 TLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYR 289
+R AAE+ + +L DK ++RDL N ++ + K+ DFGM ++
Sbjct: 124 --ARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTT 181
Query: 290 KGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV 347
G ++APE L++ ++ D W+ GV+L+EM P++ + + + +
Sbjct: 182 ATFCG--TPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLC-GHAPFEAENEDDLFEAI 236
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 97/237 (40%), Gaps = 12/237 (5%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG G FG V+ +K L + C + + E ++ + +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKL--YACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
++M +M GGD++ ++ + D E R + A++ G+ +
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQE------PRAIFYTAQIVSGLEH 304
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLK 307
L + ++RDL N ++ DD V++ D G+ ++ + KG G +MAPE L
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAG--TPGFMAPELLL 362
Query: 308 DGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSNEYKVNPPISLS 364
+ D ++ GV L+EM A P++ E+V N + E V P S
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIA-ARGPFRA-RGEKVENKELKQRVLEQAVTYPDKFS 417
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 69/139 (49%), Gaps = 11/139 (7%)
Query: 198 LVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRD 257
+ ME G L+ ++ R E+ L+ L++ ++ G+ Y+ KK +HRD
Sbjct: 110 FIQMEFCDKGTLEQWIEKRRG------EKLDKVLA--LELFEQITKGVDYIHSKKLIHRD 161
Query: 258 LAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDV 317
L N + D VK+GDFG+ + + + R S+G L R+M+PE + + D+
Sbjct: 162 LKPSNIFLVDTKQVKIGDFGLVTSL-KNDGKRTRSKGTL--RYMSPEQISSQDYGKEVDL 218
Query: 318 WSYGVVLWEMATLASQPYQ 336
++ G++L E+ + ++
Sbjct: 219 YALGLILAELLHVCDTAFE 237
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 97/237 (40%), Gaps = 12/237 (5%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG G FG V+ +K L + C + + E ++ + +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKL--YACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
++M +M GGD++ ++ + D E R + A++ G+ +
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQE------PRAIFYTAQIVSGLEH 304
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLK 307
L + ++RDL N ++ DD V++ D G+ ++ + KG G +MAPE L
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAG--TPGFMAPELLL 362
Query: 308 DGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSNEYKVNPPISLS 364
+ D ++ GV L+EM A P++ E+V N + E V P S
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIA-ARGPFRA-RGEKVENKELKQRVLEQAVTYPDKFS 417
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 98/207 (47%), Gaps = 22/207 (10%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVAN-ENASEREKAEFLNEASVMKAFDTH 182
+ +ELG G+F +V R + + LA A + N + S R+ + EA + +
Sbjct: 15 LFEELGKGAFSVVRRCV----KVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHP 70
Query: 183 HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVA 242
++V+L+ +SE +I +L+ GG+L + + +E D S +Q ++
Sbjct: 71 NIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADA-------SHCIQ---QIL 120
Query: 243 DGMAYLADKKFVHRDLAARNCMVADDL---TVKVGDFGMTRDIYETEYYRKGSRGFLPVR 299
+ + + VHR+L N ++A L VK+ DFG+ E E ++ GF
Sbjct: 121 EAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLA---IEVEGEQQAWFGFAGTP 177
Query: 300 -WMAPESLKDGVFTSHSDVWSYGVVLW 325
+++PE L+ + D+W+ GV+L+
Sbjct: 178 GYLSPEVLRKDPYGKPVDLWACGVILY 204
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 97/237 (40%), Gaps = 12/237 (5%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG G FG V+ +K L + C + + E ++ + +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKL--YACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
++M +M GGD++ ++ + D E R + A++ G+ +
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQE------PRAIFYTAQIVSGLEH 304
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLK 307
L + ++RDL N ++ DD V++ D G+ ++ + KG G +MAPE L
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAG--TPGFMAPELLL 362
Query: 308 DGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSNEYKVNPPISLS 364
+ D ++ GV L+EM A P++ E+V N + E V P S
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIA-ARGPFRA-RGEKVENKELKQRVLEQAVTYPDKFS 417
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 97/237 (40%), Gaps = 12/237 (5%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG G FG V+ +K L + C + + E ++ + +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKL--YACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
++M +M GGD++ ++ + D E R + A++ G+ +
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQE------PRAIFYTAQIVSGLEH 304
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLK 307
L + ++RDL N ++ DD V++ D G+ ++ + KG G +MAPE L
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAG--TPGFMAPELLL 362
Query: 308 DGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKGKSSNEYKVNPPISLS 364
+ D ++ GV L+EM A P++ E+V N + E V P S
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIA-ARGPFRA-RGEKVENKELKQRVLEQAVTYPDKFS 417
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 28/212 (13%)
Query: 127 ELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMK---AFDTHH 183
E+G G++G V++ +D ++ +V + E + E +V++ F+ +
Sbjct: 18 EIGEGAYGKVFKA--RDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPN 75
Query: 184 VVKLYGVVS------EGNPTLVIMELMGGGDLKNYL-RSCRPDAETDVERSPPTLSRILQ 236
VV+L+ V + E TLV + DL YL + P T+ I
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHV--DQDLTTYLDKVPEPGVPTET---------IKD 124
Query: 237 MAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFL 296
M ++ G+ +L + VHRDL +N +V +K+ DFG+ R IY ++ +
Sbjct: 125 MMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR-IYS---FQMALTSVV 180
Query: 297 PVRWM-APESLKDGVFTSHSDVWSYGVVLWEM 327
W APE L + + D+WS G + EM
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 82/182 (45%), Gaps = 17/182 (9%)
Query: 163 EREKAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAET 222
E + A LN +++ +DT G + ++ME + G L++ + +
Sbjct: 62 EAQNAAALNHPAIVAVYDTGEAETPAGPLP-----YIVMEYVDGVTLRDIVHT------- 109
Query: 223 DVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI 282
P T R +++ A+ + + +HRD+ N M++ VKV DFG+ R I
Sbjct: 110 ---EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI 166
Query: 283 YETEYYRKGSRGFL-PVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNE 341
++ + + ++++PE + + SDV+S G VL+E+ T P+ G S +
Sbjct: 167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT-GEPPFTGDSPD 225
Query: 342 QV 343
V
Sbjct: 226 SV 227
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 100/228 (43%), Gaps = 44/228 (19%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEH-----PCAIKVANE---NASEREKAEFLNEASV 175
+L +G G+F V LA H A+K+ ++ N+S +K E +
Sbjct: 18 LLKTIGKGNFAKV---------KLARHILTGKEVAVKIIDKTQLNSSSLQK--LFREVRI 66
Query: 176 MKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRIL 235
K + ++VKL+ V+ ++ E GG++ +YL + E + ++
Sbjct: 67 XKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEAR------AKFR 120
Query: 236 QMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSR-- 293
Q+ + V Y K VHRDL A N ++ D +K+ DFG + + + G++
Sbjct: 121 QIVSAVQ----YCHQKFIVHRDLKAENLLLDADXNIKIADFGFSNE------FTFGNKLD 170
Query: 294 ---GFLPVRWMAPESLKDGVFTS-HSDVWSYGVVLWEMATLASQPYQG 337
G P + APE + + DVWS GV+L+ + + S P+ G
Sbjct: 171 AFCGAPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDG 215
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 28/212 (13%)
Query: 127 ELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMK---AFDTHH 183
E+G G++G V++ +D ++ +V + E + E +V++ F+ +
Sbjct: 18 EIGEGAYGKVFKA--RDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPN 75
Query: 184 VVKLYGVVS------EGNPTLVIMELMGGGDLKNYL-RSCRPDAETDVERSPPTLSRILQ 236
VV+L+ V + E TLV + DL YL + P T+ I
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHV--DQDLTTYLDKVPEPGVPTET---------IKD 124
Query: 237 MAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFL 296
M ++ G+ +L + VHRDL +N +V +K+ DFG+ R IY ++ +
Sbjct: 125 MMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR-IYS---FQMALTSVV 180
Query: 297 PVRWM-APESLKDGVFTSHSDVWSYGVVLWEM 327
W APE L + + D+WS G + EM
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 98/230 (42%), Gaps = 38/230 (16%)
Query: 120 SKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAF 179
K L+++G G++G V++ R E +V ++ E + L E ++K
Sbjct: 2 QKYEKLEKIGEGTYGTVFKA---KNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL 58
Query: 180 DTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAA 239
++V+L+ V+ ++ E DLK Y SC D + ++ +S
Sbjct: 59 KHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKS---------FLF 108
Query: 240 EVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGF-LPV 298
++ G+ + + +HRDL +N ++ + +K+ +FG+ +R F +PV
Sbjct: 109 QLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGL-------------ARAFGIPV 155
Query: 299 R---------WMAPESLKDG--VFTSHSDVWSYGVVLWEMATLASQPYQG 337
R W P + G ++++ D+WS G + E+A + G
Sbjct: 156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPG 205
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 95/208 (45%), Gaps = 24/208 (11%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHH 183
+ +ELG G+F +V R + K + + A + + S R+ + EA + + +
Sbjct: 35 LFEELGKGAFSVVRRCVKK---TPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPN 91
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
+V+L+ +SE ++ +L+ GG+L + + +E D ++ +
Sbjct: 92 IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS----------HCIHQILE 141
Query: 244 GMAYLADKKFVHRDLAARNCMVADDL---TVKVGDFGMTRDIYETE---YYRKGSRGFLP 297
+ ++ VHRDL N ++A VK+ DFG+ ++ + + G+ G+L
Sbjct: 142 SVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYL- 200
Query: 298 VRWMAPESLKDGVFTSHSDVWSYGVVLW 325
+PE L+ + D+W+ GV+L+
Sbjct: 201 ----SPEVLRKDPYGKPVDIWACGVILY 224
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 28/212 (13%)
Query: 127 ELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMK---AFDTHH 183
E+G G++G V++ +D ++ +V + E + E +V++ F+ +
Sbjct: 18 EIGEGAYGKVFKA--RDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPN 75
Query: 184 VVKLYGVVS------EGNPTLVIMELMGGGDLKNYL-RSCRPDAETDVERSPPTLSRILQ 236
VV+L+ V + E TLV + DL YL + P T+ I
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHV--DQDLTTYLDKVPEPGVPTET---------IKD 124
Query: 237 MAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFL 296
M ++ G+ +L + VHRDL +N +V +K+ DFG+ R IY ++ +
Sbjct: 125 MMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR-IYS---FQMALTSVV 180
Query: 297 PVRWM-APESLKDGVFTSHSDVWSYGVVLWEM 327
W APE L + + D+WS G + EM
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHV 184
++++G G++G+VY+ K E K+ + +E + + E S++K + ++
Sbjct: 11 VEKIGEGTYGVVYKARNK---LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 185 VKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADG 244
VKL V+ N ++ E + DLK ++ + A T + L I ++ G
Sbjct: 68 VKLLDVIHTENKLYLVFEHVDQ-DLKKFMDAS---ALTGI-----PLPLIKSYLFQLLQG 118
Query: 245 MAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPE 304
+A+ + +HRDL +N ++ + +K+ DFG+ R R + + + APE
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYXHEVVTLWYRAPE 176
Query: 305 SLKDGVFTSHS-DVWSYGVVLWEMAT 329
L + S + D+WS G + EM T
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 98/221 (44%), Gaps = 33/221 (14%)
Query: 120 SKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIK-VANENASEREKAEFLNEASVMK- 177
S+ + E+G G++G VY+ +D S H A+K V N E + E ++++
Sbjct: 4 SRYEPVAEIGVGAYGTVYKA--RDPHS--GHFVALKSVRVPNGEEGLPISTVREVALLRR 59
Query: 178 --AFDTHHVVKLYGVVS------EGNPTLVIMELMGGGDLKNYLRSCRPD---AETDVER 226
AF+ +VV+L V + E TLV + DL+ YL P AET
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV--DQDLRTYLDKAPPPGLPAET---- 113
Query: 227 SPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETE 286
I + + G+ +L VHRDL N +V TVK+ DFG+ R IY
Sbjct: 114 -------IKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLAR-IY--S 163
Query: 287 YYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEM 327
Y + + + + APE L + + D+WS G + EM
Sbjct: 164 YQMALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 97/225 (43%), Gaps = 41/225 (18%)
Query: 120 SKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIK-VANENASEREKAEFLNEASVMK- 177
S+ + E+G G++G VY+ +D S H A+K V N E + E ++++
Sbjct: 4 SRYEPVAEIGVGAYGTVYKA--RDPHS--GHFVALKSVRVPNGEEGLPISTVREVALLRR 59
Query: 178 --AFDTHHVVKLYGVVS------EGNPTLVIMELMGGGDLKNYLRSCRPD---AETDVER 226
AF+ +VV+L V + E TLV + DL+ YL P AET
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV--DQDLRTYLDKAPPPGLPAET---- 113
Query: 227 SPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETE 286
I + + G+ +L VHRDL N +V TVK+ DFG+ R IY +
Sbjct: 114 -------IKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLAR-IYSYQ 165
Query: 287 YYRKGSRGFLPVR----WMAPESLKDGVFTSHSDVWSYGVVLWEM 327
PV + APE L + + D+WS G + EM
Sbjct: 166 M------ALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 111/263 (42%), Gaps = 32/263 (12%)
Query: 104 GDDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIK---VANEN 160
DDD L++ D +E + + +G G F +V R + ++ A+K VA
Sbjct: 18 ADDDVLFE-DVYE-------LCEVIGKGPFSVVRRCINRE----TGQQFAVKIVDVAKFT 65
Query: 161 ASEREKAEFLN-EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPD 219
+S E L EAS+ H+V+L S ++ E M G DL +
Sbjct: 66 SSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVK---R 122
Query: 220 AETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVA---DDLTVKVGDF 276
A+ S S ++ ++ + + Y D +HRD+ ++A + VK+G F
Sbjct: 123 ADAGFVYSEAVASHYMR---QILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGF 179
Query: 277 GMTRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQ 336
G+ + E+ G G +MAPE +K + DVW GV+L+ + + P+
Sbjct: 180 GVAIQLGESGLVAGGRVG--TPHFMAPEVVKREPYGKPVDVWGCGVILFILLS-GCLPFY 236
Query: 337 GLSNEQVLNWVKGKSSNEYKVNP 359
G +KGK YK+NP
Sbjct: 237 GTKERLFEGIIKGK----YKMNP 255
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 97/222 (43%), Gaps = 35/222 (15%)
Query: 120 SKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIK-VANENASEREKAEFLNEASVMK- 177
S+ + E+G G++G VY+ +D S H A+K V N E + E ++++
Sbjct: 4 SRYEPVAEIGVGAYGTVYKA--RDPHS--GHFVALKSVRVPNGEEGLPISTVREVALLRR 59
Query: 178 --AFDTHHVVKLYGVVS------EGNPTLVIMELMGGGDLKNYLRSCRPD---AETDVER 226
AF+ +VV+L V + E TLV + DL+ YL P AET
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV--DQDLRTYLDKAPPPGLPAET---- 113
Query: 227 SPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETE 286
I + + G+ +L VHRDL N +V TVK+ DFG+ R IY
Sbjct: 114 -------IKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLAR-IYS-- 163
Query: 287 YYRKGSRGFLPVRWM-APESLKDGVFTSHSDVWSYGVVLWEM 327
Y+ + W APE L + + D+WS G + EM
Sbjct: 164 -YQMALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 111/263 (42%), Gaps = 32/263 (12%)
Query: 104 GDDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIK---VANEN 160
DDD L++ D +E + + +G G F +V R + ++ A+K VA
Sbjct: 16 ADDDVLFE-DVYE-------LCEVIGKGPFSVVRRCINRE----TGQQFAVKIVDVAKFT 63
Query: 161 ASEREKAEFLN-EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPD 219
+S E L EAS+ H+V+L S ++ E M G DL +
Sbjct: 64 SSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVK---R 120
Query: 220 AETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVA---DDLTVKVGDF 276
A+ S S ++ ++ + + Y D +HRD+ ++A + VK+G F
Sbjct: 121 ADAGFVYSEAVASHYMR---QILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGF 177
Query: 277 GMTRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQ 336
G+ + E+ G G +MAPE +K + DVW GV+L+ + + P+
Sbjct: 178 GVAIQLGESGLVAGGRVG--TPHFMAPEVVKREPYGKPVDVWGCGVILFILLS-GCLPFY 234
Query: 337 GLSNEQVLNWVKGKSSNEYKVNP 359
G +KGK YK+NP
Sbjct: 235 GTKERLFEGIIKGK----YKMNP 253
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 87/183 (47%), Gaps = 22/183 (12%)
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
+ +L+ + +ME + GGDL +++ E + AAE+A
Sbjct: 83 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKE----------PHAVFYAAEIAI 132
Query: 244 GMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPV-RWMA 302
G+ +L K ++RDL N M+ + +K+ DFGM + E + ++ F ++A
Sbjct: 133 GLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKXFCGTPDYIA 189
Query: 303 PESLKDGVFTSHSDVWSYGVVLWEMATLASQ-PYQGLSNEQVLNWVKGKSSNEYKVNPPI 361
PE + + D W++GV+L+EM LA Q P++G +++ +S E+ V P
Sbjct: 190 PEIIAYQPYGKSVDWWAFGVLLYEM--LAGQAPFEGEDEDELF-----QSIMEHNVAYPK 242
Query: 362 SLS 364
S+S
Sbjct: 243 SMS 245
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 80/178 (44%), Gaps = 17/178 (9%)
Query: 163 EREKAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAET 222
E + A LN +++ +DT G + ++ME + G L++ + +
Sbjct: 62 EAQNAAALNHPAIVAVYDTGEAETPAGPLP-----YIVMEYVDGVTLRDIVHT------- 109
Query: 223 DVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI 282
P T R +++ A+ + + +HRD+ N M++ VKV DFG+ R I
Sbjct: 110 ---EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI 166
Query: 283 YETEYYRKGSRGFL-PVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLS 339
++ + + ++++PE + + SDV+S G VL+E+ T P+ G S
Sbjct: 167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT-GEPPFTGDS 223
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 80/178 (44%), Gaps = 17/178 (9%)
Query: 163 EREKAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAET 222
E + A LN +++ +DT G + ++ME + G L++ + +
Sbjct: 62 EAQNAAALNHPAIVAVYDTGEAETPAGPLP-----YIVMEYVDGVTLRDIVHT------- 109
Query: 223 DVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI 282
P T R +++ A+ + + +HRD+ N M++ VKV DFG+ R I
Sbjct: 110 ---EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI 166
Query: 283 YETEYYRKGSRGFL-PVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLS 339
++ + + ++++PE + + SDV+S G VL+E+ T P+ G S
Sbjct: 167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT-GEPPFTGDS 223
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 96/216 (44%), Gaps = 17/216 (7%)
Query: 115 WEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEAS 174
++ L K L+++G G++G+VY+ R +A + +E + + E S
Sbjct: 16 FQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIP----STAIREIS 71
Query: 175 VMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRI 234
++K ++V L V+ ++ E M DLK L D ++ S+I
Sbjct: 72 LLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVL---------DENKTGLQDSQI 121
Query: 235 LQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRG 294
++ G+A+ + +HRDL +N ++ D +K+ DFG+ R R +
Sbjct: 122 KIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIP--VRSYTHE 179
Query: 295 FLPVRWMAPESLKDG-VFTSHSDVWSYGVVLWEMAT 329
+ + + AP+ L +++ D+WS G + EM T
Sbjct: 180 VVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMIT 215
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 96/216 (44%), Gaps = 17/216 (7%)
Query: 115 WEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEAS 174
++ L K L+++G G++G+VY+ R +A + +E + + E S
Sbjct: 16 FQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIP----STAIREIS 71
Query: 175 VMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRI 234
++K ++V L V+ ++ E M DLK L D ++ S+I
Sbjct: 72 LLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVL---------DENKTGLQDSQI 121
Query: 235 LQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRG 294
++ G+A+ + +HRDL +N ++ D +K+ DFG+ R R +
Sbjct: 122 KIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIP--VRSYTHE 179
Query: 295 FLPVRWMAPESLKDG-VFTSHSDVWSYGVVLWEMAT 329
+ + + AP+ L +++ D+WS G + EM T
Sbjct: 180 VVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMIT 215
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 80/178 (44%), Gaps = 17/178 (9%)
Query: 163 EREKAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAET 222
E + A LN +++ +DT G + ++ME + G L++ + +
Sbjct: 79 EAQNAAALNHPAIVAVYDTGEAETPAGPLP-----YIVMEYVDGVTLRDIVHT------- 126
Query: 223 DVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI 282
P T R +++ A+ + + +HRD+ N M++ VKV DFG+ R I
Sbjct: 127 ---EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI 183
Query: 283 YETEYYRKGSRGFL-PVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLS 339
++ + + ++++PE + + SDV+S G VL+E+ T P+ G S
Sbjct: 184 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT-GEPPFTGDS 240
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 98/209 (46%), Gaps = 26/209 (12%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVAN-ENASEREKAEFLNEASVMKAFDTH 182
+ +++G G+F +V R + + H A K+ N + S R+ + EA + +
Sbjct: 8 LYEDIGKGAFSVVRRCV----KLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHS 63
Query: 183 HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVA 242
++V+L+ +SE ++ +L+ GG+L + + +E D S +Q ++
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADA-------SHCIQ---QIL 113
Query: 243 DGMAYLADKKFVHRDLAARNCMVADDL---TVKVGDFGMTRDIYETE---YYRKGSRGFL 296
+ + + VHRDL N ++A VK+ DFG+ ++ + + G+ G+L
Sbjct: 114 EAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYL 173
Query: 297 PVRWMAPESLKDGVFTSHSDVWSYGVVLW 325
+PE L+ + D+W+ GV+L+
Sbjct: 174 -----SPEVLRKEAYGKPVDIWACGVILY 197
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 98/234 (41%), Gaps = 20/234 (8%)
Query: 119 RSKVTI-----LDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEA 173
R+KVT+ L LG G+FG V L+++ + + I ++ E A + E+
Sbjct: 2 RAKVTMNDFDYLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTES 59
Query: 174 SVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSR 233
V++ + L + +ME GG+L +L R E R
Sbjct: 60 RVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTE----------ER 109
Query: 234 ILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSR 293
AE+ + YL + V+RD+ N M+ D +K+ DFG+ ++ K
Sbjct: 110 ARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC 169
Query: 294 GFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV 347
G ++APE L+D + D W GVV++EM P+ +E++ +
Sbjct: 170 G--TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC-GRLPFYNQDHERLFELI 220
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 95/224 (42%), Gaps = 24/224 (10%)
Query: 118 LRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANEN---ASEREKAEFLNEAS 174
L S+ L LG G GLV+ + D C +VA + + L E
Sbjct: 9 LGSRYMDLKPLGCGGNGLVFSAVDND--------CDKRVAIKKIVLTDPQSVKHALREIK 60
Query: 175 VMKAFDTHHVVKLYGVVSEGNPTLV-----IMELMGGGDLKNYLRSCRPDAETDVERSPP 229
+++ D ++VK++ ++ L + EL ++ Y+ + D +E+ P
Sbjct: 61 IIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET---DLANVLEQGPL 117
Query: 230 TLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMV-ADDLTVKVGDFGMTRDIYETEYY 288
++ G+ Y+ +HRDL N + +DL +K+GDFG+ R I + Y
Sbjct: 118 LEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLAR-IMDPHYS 176
Query: 289 RKG--SRGFLPVRWMAPE-SLKDGVFTSHSDVWSYGVVLWEMAT 329
KG S G + + +P L +T D+W+ G + EM T
Sbjct: 177 HKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLT 220
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 87/183 (47%), Gaps = 22/183 (12%)
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
+ +L+ + +ME + GGDL +++ E + AAE+A
Sbjct: 404 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKE----------PHAVFYAAEIAI 453
Query: 244 GMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPV-RWMA 302
G+ +L K ++RDL N M+ + +K+ DFGM + E + ++ F ++A
Sbjct: 454 GLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKXFCGTPDYIA 510
Query: 303 PESLKDGVFTSHSDVWSYGVVLWEMATLASQ-PYQGLSNEQVLNWVKGKSSNEYKVNPPI 361
PE + + D W++GV+L+EM LA Q P++G +++ +S E+ V P
Sbjct: 511 PEIIAYQPYGKSVDWWAFGVLLYEM--LAGQAPFEGEDEDELF-----QSIMEHNVAYPK 563
Query: 362 SLS 364
S+S
Sbjct: 564 SMS 566
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 106/243 (43%), Gaps = 34/243 (13%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVAN-ENASEREKAEFLN 171
W++ ++ I + +G G FG VY G R E AI++ + E +E + F
Sbjct: 26 QEWDIPFEQLEIGELIGKGRFGQVYHG-----RWHGE--VAIRLIDIERDNEDQLKAFKR 78
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
E + +VV G +I L G L + +R + + + R
Sbjct: 79 EVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTR----- 133
Query: 232 SRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKG 291
Q+A E+ GM YL K +H+DL ++N D+ V + DFG+ + R+
Sbjct: 134 ----QIAQEIVKGMGYLHAKGILHKDLKSKNVFY-DNGKVVITDFGLFSISGVLQAGRRE 188
Query: 292 SR-----GFL------PVRWMAPESLKDGV-FTSHSDVWSYGVVLWEMAT----LASQPY 335
+ G+L +R ++P++ +D + F+ HSDV++ G + +E+ +QP
Sbjct: 189 DKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPA 248
Query: 336 QGL 338
+ +
Sbjct: 249 EAI 251
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 28/168 (16%)
Query: 168 EFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIM--ELMGGGDLKNYLRSCRPDAETDVE 225
+ E +++K D +VVKL V+ + N + M EL+ G P E
Sbjct: 82 QVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQG----------PVMEV--- 128
Query: 226 RSPPTLSRILQMAA-----EVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTR 280
PTL + + A ++ G+ YL +K +HRD+ N +V +D +K+ DFG++
Sbjct: 129 ---PTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSN 185
Query: 281 DIYETEYYRKGSRGFLPVRWMAPESLKD--GVFTSHS-DVWSYGVVLW 325
+ ++ + G P +MAPESL + +F+ + DVW+ GV L+
Sbjct: 186 EFKGSDALLSNTVG-TPA-FMAPESLSETRKIFSGKALDVWAMGVTLY 231
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 69/139 (49%), Gaps = 11/139 (7%)
Query: 198 LVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRD 257
+ ME G L+ ++ R E+ L+ L++ ++ G+ Y+ KK ++RD
Sbjct: 96 FIQMEFCDKGTLEQWIEKRRG------EKLDKVLA--LELFEQITKGVDYIHSKKLINRD 147
Query: 258 LAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDV 317
L N + D VK+GDFG+ + + + R S+G L R+M+PE + + D+
Sbjct: 148 LKPSNIFLVDTKQVKIGDFGLVTSL-KNDGKRXRSKGTL--RYMSPEQISSQDYGKEVDL 204
Query: 318 WSYGVVLWEMATLASQPYQ 336
++ G++L E+ + ++
Sbjct: 205 YALGLILAELLHVCDTAFE 223
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 18/204 (8%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
+G G+FG V L++ + + + E + A F E +M ++ VV+L
Sbjct: 82 IGRGAFGEV--QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL 139
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
+ + ++ME M GGDL N + + DV P +R AEV +
Sbjct: 140 FYAFQDDRYLYMVMEYMPGGDLVNLM------SNYDV---PEKWARFY--TAEVVLALDA 188
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLK 307
+ F+HRD+ N ++ +K+ DFG + + R + P +++PE LK
Sbjct: 189 IHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTP-DYISPEVLK 247
Query: 308 ----DGVFTSHSDVWSYGVVLWEM 327
DG + D WS GV L+EM
Sbjct: 248 SQGGDGYYGRECDWWSVGVFLYEM 271
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 18/204 (8%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
+G G+FG V L++ + + + E + A F E +M ++ VV+L
Sbjct: 77 IGRGAFGEV--QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL 134
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
+ + ++ME M GGDL N + + DV P +R AEV +
Sbjct: 135 FYAFQDDRYLYMVMEYMPGGDLVNLM------SNYDV---PEKWARFY--TAEVVLALDA 183
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLK 307
+ F+HRD+ N ++ +K+ DFG + + R + P +++PE LK
Sbjct: 184 IHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTP-DYISPEVLK 242
Query: 308 ----DGVFTSHSDVWSYGVVLWEM 327
DG + D WS GV L+EM
Sbjct: 243 SQGGDGYYGRECDWWSVGVFLYEM 266
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 39/248 (15%)
Query: 104 GDDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASE 163
G +D+L + + K D +G G +V R + + H A+K+ E +E
Sbjct: 78 GPEDELPDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHR----ATGHEFAVKIM-EVTAE 132
Query: 164 REKAEFLNEASVMKAFDTH---------HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLR 214
R E L E +TH H++ L + ++ +LM G+L +YL
Sbjct: 133 RLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL- 191
Query: 215 SCRPDAETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVG 274
E+ + + + + +++L VHRDL N ++ D++ +++
Sbjct: 192 ---------TEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLS 242
Query: 275 DFGMTRDIYETEYYRK--GSRGFLPVRWMAPESLKDGVFTSHS------DVWSYGVVLWE 326
DFG + + E R+ G+ G+L APE LK + +H D+W+ GV+L+
Sbjct: 243 DFGFSCHLEPGEKLRELCGTPGYL-----APEILKCSMDETHPGYGKEVDLWACGVILFT 297
Query: 327 MATLASQP 334
+ LA P
Sbjct: 298 L--LAGSP 303
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 95/219 (43%), Gaps = 22/219 (10%)
Query: 111 KKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAE-- 168
KK W + I LG G FG VY K + + A+KV + E+ E
Sbjct: 6 KKRQWAL--EDFEIGRPLGKGKFGNVYLAREKQSKFI----LALKVLFKAQLEKAGVEHQ 59
Query: 169 FLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSP 228
E + ++++LYG + +I+E G++ L+ ++ D +R+
Sbjct: 60 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKL---SKFDEQRTA 116
Query: 229 PTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY 288
++ E+A+ ++Y K+ +HRD+ N ++ +K+ DFG + ++
Sbjct: 117 TYIT-------ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSR 167
Query: 289 RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEM 327
R G L ++ PE ++ + D+WS GV+ +E
Sbjct: 168 RXXLXGTLD--YLPPEMIEGRMHDEKVDLWSLGVLCYEF 204
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 18/204 (8%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
+G G+FG V L++ + + + E + A F E +M ++ VV+L
Sbjct: 82 IGRGAFGEV--QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL 139
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
+ + ++ME M GGDL N + + DV P +R AEV +
Sbjct: 140 FYAFQDDRYLYMVMEYMPGGDLVNLM------SNYDV---PEKWARFY--TAEVVLALDA 188
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLK 307
+ F+HRD+ N ++ +K+ DFG + + R + P +++PE LK
Sbjct: 189 IHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTP-DYISPEVLK 247
Query: 308 ----DGVFTSHSDVWSYGVVLWEM 327
DG + D WS GV L+EM
Sbjct: 248 SQGGDGYYGRECDWWSVGVFLYEM 271
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 77/176 (43%), Gaps = 16/176 (9%)
Query: 169 FLNEASVMKAFDTHHVVKLYGVVSEGNPT----LVIMELMGGGDLKNYLRSCRPDAETDV 224
F EA A + +V +Y P ++ME + G L++ + +
Sbjct: 59 FRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHT--------- 109
Query: 225 ERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYE 284
P T R +++ A+ + + +HRD+ N M++ VKV DFG+ R I +
Sbjct: 110 -EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIAD 168
Query: 285 TEYYRKGSRGFL-PVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLS 339
+ + + ++++PE + + SDV+S G VL+E+ T P+ G S
Sbjct: 169 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT-GEPPFTGDS 223
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 100/238 (42%), Gaps = 53/238 (22%)
Query: 122 VTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDT 181
+ + + +G G FG V+RG + A+K+ S RE+ + EA + +
Sbjct: 6 IVLQESIGKGRFGEVWRGKWRG------EEVAVKIF----SSREERSWFREAEIYQTVML 55
Query: 182 HH--VVKLYGVVSEGNPTLVIMELMGG----GDLKNYLRSCRPDAETDVERSPPTLSRIL 235
H ++ ++ N T + L+ G L +YL R T+ ++
Sbjct: 56 RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----------NRYTVTVEGMI 104
Query: 236 QMAAEVADGMAYL--------ADKKFVHRDLAARNCMVADDLTVKVGDFGM-------TR 280
++A A G+A+L HRDL ++N +V + T + D G+ T
Sbjct: 105 KLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATD 164
Query: 281 DIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSH------SDVWSYGVVLWEMATLAS 332
I +R G++ R+MAPE L D + H +D+++ G+V WE+A S
Sbjct: 165 TIDIAPNHRVGTK-----RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCS 217
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 80/178 (44%), Gaps = 17/178 (9%)
Query: 163 EREKAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAET 222
E + A LN +++ +DT G + ++ME + G L++ + +
Sbjct: 62 EAQNAAALNHPAIVAVYDTGEAETPAGPLP-----YIVMEYVDGVTLRDIVHT------- 109
Query: 223 DVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI 282
P T R +++ A+ + + +HRD+ N +++ VKV DFG+ R I
Sbjct: 110 ---EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAI 166
Query: 283 YETEYYRKGSRGFL-PVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLS 339
++ + + ++++PE + + SDV+S G VL+E+ T P+ G S
Sbjct: 167 ADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT-GEPPFTGDS 223
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 100/238 (42%), Gaps = 53/238 (22%)
Query: 122 VTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDT 181
+ + + +G G FG V+RG + A+K+ S RE+ + EA + +
Sbjct: 31 IVLQESIGKGRFGEVWRGKWRG------EEVAVKIF----SSREERSWFREAEIYQTVML 80
Query: 182 HH--VVKLYGVVSEGNPTLVIMELMGG----GDLKNYLRSCRPDAETDVERSPPTLSRIL 235
H ++ ++ N T + L+ G L +YL R T+ ++
Sbjct: 81 RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----------NRYTVTVEGMI 129
Query: 236 QMAAEVADGMAYL--------ADKKFVHRDLAARNCMVADDLTVKVGDFGM-------TR 280
++A A G+A+L HRDL ++N +V + T + D G+ T
Sbjct: 130 KLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATD 189
Query: 281 DIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSH------SDVWSYGVVLWEMATLAS 332
I +R G++ R+MAPE L D + H +D+++ G+V WE+A S
Sbjct: 190 TIDIAPNHRVGTK-----RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCS 242
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 100/238 (42%), Gaps = 53/238 (22%)
Query: 122 VTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDT 181
+ + + +G G FG V+RG + A+K+ S RE+ + EA + +
Sbjct: 5 IVLQESIGKGRFGEVWRGKWRG------EEVAVKIF----SSREERSWFREAEIYQTVML 54
Query: 182 HH--VVKLYGVVSEGNPTLVIMELMGG----GDLKNYLRSCRPDAETDVERSPPTLSRIL 235
H ++ ++ N T + L+ G L +YL R T+ ++
Sbjct: 55 RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----------NRYTVTVEGMI 103
Query: 236 QMAAEVADGMAYL--------ADKKFVHRDLAARNCMVADDLTVKVGDFGM-------TR 280
++A A G+A+L HRDL ++N +V + T + D G+ T
Sbjct: 104 KLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATD 163
Query: 281 DIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSH------SDVWSYGVVLWEMATLAS 332
I +R G++ R+MAPE L D + H +D+++ G+V WE+A S
Sbjct: 164 TIDIAPNHRVGTK-----RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCS 216
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 100/238 (42%), Gaps = 53/238 (22%)
Query: 122 VTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDT 181
+ + + +G G FG V+RG + A+K+ S RE+ + EA + +
Sbjct: 8 IVLQESIGKGRFGEVWRGKWRG------EEVAVKIF----SSREERSWFREAEIYQTVML 57
Query: 182 HH--VVKLYGVVSEGNPTLVIMELMGG----GDLKNYLRSCRPDAETDVERSPPTLSRIL 235
H ++ ++ N T + L+ G L +YL R T+ ++
Sbjct: 58 RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----------NRYTVTVEGMI 106
Query: 236 QMAAEVADGMAYL--------ADKKFVHRDLAARNCMVADDLTVKVGDFGM-------TR 280
++A A G+A+L HRDL ++N +V + T + D G+ T
Sbjct: 107 KLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATD 166
Query: 281 DIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSH------SDVWSYGVVLWEMATLAS 332
I +R G++ R+MAPE L D + H +D+++ G+V WE+A S
Sbjct: 167 TIDIAPNHRVGTK-----RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCS 219
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 100/238 (42%), Gaps = 53/238 (22%)
Query: 122 VTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDT 181
+ + + +G G FG V+RG + A+K+ S RE+ + EA + +
Sbjct: 44 IVLQESIGKGRFGEVWRGKWRG------EEVAVKIF----SSREERSWFREAEIYQTVML 93
Query: 182 HH--VVKLYGVVSEGNPTLVIMELMGG----GDLKNYLRSCRPDAETDVERSPPTLSRIL 235
H ++ ++ N T + L+ G L +YL R T+ ++
Sbjct: 94 RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----------NRYTVTVEGMI 142
Query: 236 QMAAEVADGMAYL--------ADKKFVHRDLAARNCMVADDLTVKVGDFGM-------TR 280
++A A G+A+L HRDL ++N +V + T + D G+ T
Sbjct: 143 KLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATD 202
Query: 281 DIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSH------SDVWSYGVVLWEMATLAS 332
I +R G++ R+MAPE L D + H +D+++ G+V WE+A S
Sbjct: 203 TIDIAPNHRVGTK-----RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCS 255
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 94/219 (42%), Gaps = 25/219 (11%)
Query: 116 EVLRSKVTILD-----ELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAE-- 168
E+ + K TI D LG G FG VY K + + A+KV ++ E+E E
Sbjct: 5 EMPKRKFTIDDFDIVRPLGKGKFGNVYLAREKQNKFI----MALKVLFKSQLEKEGVEHQ 60
Query: 169 FLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSP 228
E + +++++Y + +++E G+L L+ D +RS
Sbjct: 61 LRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQK---HGRFDEQRSA 117
Query: 229 PTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY 288
+ E+AD + Y ++K +HRD+ N ++ +K+ DFG + ++
Sbjct: 118 TFME-------ELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLR 168
Query: 289 RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEM 327
R+ G L ++ PE ++ D+W GV+ +E
Sbjct: 169 RRXMCGTL--DYLPPEMIEGKTHDEKVDLWCAGVLCYEF 205
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 94/219 (42%), Gaps = 25/219 (11%)
Query: 116 EVLRSKVTILD-----ELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAE-- 168
E+ + K TI D LG G FG VY K + + A+KV ++ E+E E
Sbjct: 6 EMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFI----MALKVLFKSQLEKEGVEHQ 61
Query: 169 FLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSP 228
E + +++++Y + +++E G+L L+ D +RS
Sbjct: 62 LRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQK---HGRFDEQRSA 118
Query: 229 PTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY 288
+ E+AD + Y ++K +HRD+ N ++ +K+ DFG + ++
Sbjct: 119 TFME-------ELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLR 169
Query: 289 RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEM 327
R+ G L ++ PE ++ D+W GV+ +E
Sbjct: 170 RRXMCGTL--DYLPPEMIEGKTHDEKVDLWCAGVLCYEF 206
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 100/238 (42%), Gaps = 53/238 (22%)
Query: 122 VTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDT 181
+ + + +G G FG V+RG + A+K+ S RE+ + EA + +
Sbjct: 11 IVLQESIGKGRFGEVWRGKWRG------EEVAVKIF----SSREERSWFREAEIYQTVML 60
Query: 182 HH--VVKLYGVVSEGNPTLVIMELMGG----GDLKNYLRSCRPDAETDVERSPPTLSRIL 235
H ++ ++ N T + L+ G L +YL R T+ ++
Sbjct: 61 RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----------NRYTVTVEGMI 109
Query: 236 QMAAEVADGMAYL--------ADKKFVHRDLAARNCMVADDLTVKVGDFGM-------TR 280
++A A G+A+L HRDL ++N +V + T + D G+ T
Sbjct: 110 KLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATD 169
Query: 281 DIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSH------SDVWSYGVVLWEMATLAS 332
I +R G++ R+MAPE L D + H +D+++ G+V WE+A S
Sbjct: 170 TIDIAPNHRVGTK-----RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCS 222
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 94/219 (42%), Gaps = 25/219 (11%)
Query: 116 EVLRSKVTILD-----ELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAE-- 168
E+ + K TI D LG G FG VY K + + A+KV ++ E+E E
Sbjct: 5 EMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFI----MALKVLFKSQLEKEGVEHQ 60
Query: 169 FLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSP 228
E + +++++Y + +++E G+L L+ D +RS
Sbjct: 61 LRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQK---HGRFDEQRSA 117
Query: 229 PTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY 288
+ E+AD + Y ++K +HRD+ N ++ +K+ DFG + ++
Sbjct: 118 TFME-------ELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLR 168
Query: 289 RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEM 327
R+ G L ++ PE ++ D+W GV+ +E
Sbjct: 169 RRXMCGTL--DYLPPEMIEGKTHDEKVDLWCAGVLCYEF 205
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 102/229 (44%), Gaps = 24/229 (10%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHH 183
I +ELG G+FG+V+R R+ + A V + S++E E M
Sbjct: 161 IHEELGTGAFGVVHRVTE---RATGNNFAAKFVMTPHESDKETVR--KEIQTMSVLRHPT 215
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
+V L+ + N ++I E M GG+L + E + + ++ +V
Sbjct: 216 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVAD---------EHNKMSEDEAVEYMRQVCK 266
Query: 244 GMAYLADKKFVHRDLAARNCMVADDLT--VKVGDFGMTR--DIYETEYYRKGSRGFLPVR 299
G+ ++ + +VH DL N M + +K+ DFG+T D ++ G+ F
Sbjct: 267 GLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEF---- 322
Query: 300 WMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVK 348
APE + ++D+WS GV+ + + + S P+ G ++++ L VK
Sbjct: 323 -AAPEVAEGKPVGYYTDMWSVGVLSYILLSGLS-PFGGENDDETLRNVK 369
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 101/236 (42%), Gaps = 21/236 (8%)
Query: 118 LRSKVTI-----LDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNE 172
L S+VT+ L LG G+FG V L+K+ + + I ++ E A L E
Sbjct: 1 LGSRVTMNEFEYLKLLGKGTFGKVI--LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTE 58
Query: 173 ASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLS 232
V++ + L + +ME GG+L +L R +E
Sbjct: 59 NRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSE----------D 108
Query: 233 RILQMAAEVADGMAYL-ADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKG 291
R AE+ + YL ++K V+RDL N M+ D +K+ DFG+ ++ + K
Sbjct: 109 RARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX 168
Query: 292 SRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV 347
G ++APE L+D + D W GVV++EM P+ +E++ +
Sbjct: 169 FCG--TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC-GRLPFYNQDHEKLFELI 221
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 102/229 (44%), Gaps = 24/229 (10%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHH 183
I +ELG G+FG+V+R R+ + A V + S++E E M
Sbjct: 55 IHEELGTGAFGVVHRVTE---RATGNNFAAKFVMTPHESDKETVR--KEIQTMSVLRHPT 109
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
+V L+ + N ++I E M GG+L + E + + ++ +V
Sbjct: 110 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVAD---------EHNKMSEDEAVEYMRQVCK 160
Query: 244 GMAYLADKKFVHRDLAARNCMVADDLT--VKVGDFGMTR--DIYETEYYRKGSRGFLPVR 299
G+ ++ + +VH DL N M + +K+ DFG+T D ++ G+ F
Sbjct: 161 GLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEF---- 216
Query: 300 WMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVK 348
APE + ++D+WS GV+ + + + S P+ G ++++ L VK
Sbjct: 217 -AAPEVAEGKPVGYYTDMWSVGVLSYILLSGLS-PFGGENDDETLRNVK 263
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 101/227 (44%), Gaps = 20/227 (8%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHH 183
IL+ELG+G+FG+V+R + K A + +K NE S+M
Sbjct: 55 ILEELGSGAFGVVHRCVEK-----ATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPK 109
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
++ L+ + ++I+E + GG+L + + A D + S + ++ A E
Sbjct: 110 LINLHDAFEDKYEMVLILEFLSGGELFDRI------AAEDYKMSEAEVINYMRQACE--- 160
Query: 244 GMAYLADKKFVHRDLAARN--CMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWM 301
G+ ++ + VH D+ N C +VK+ DFG+ + E + + +
Sbjct: 161 GLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTAT---AEFA 217
Query: 302 APESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVK 348
APE + ++D+W+ GV+ + + + S P+ G + + L VK
Sbjct: 218 APEIVDREPVGFYTDMWAIGVLGYVLLSGLS-PFAGEDDLETLQNVK 263
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 95/219 (43%), Gaps = 22/219 (10%)
Query: 111 KKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAE-- 168
KK W + I LG G FG VY K + + A+KV + E+ E
Sbjct: 6 KKRQWAL--EDFEIGRPLGKGKFGNVYLAREKQSKFI----LALKVLFKAQLEKAGVEHQ 59
Query: 169 FLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSP 228
E + ++++LYG + +I+E G++ L+ ++ D +R+
Sbjct: 60 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKL---SKFDEQRTA 116
Query: 229 PTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY 288
++ E+A+ ++Y K+ +HRD+ N ++ +K+ DFG + ++
Sbjct: 117 TYIT-------ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSR 167
Query: 289 RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEM 327
R G L ++ PE ++ + D+WS GV+ +E
Sbjct: 168 RTTLCGTLD--YLPPEMIEGRMHDEKVDLWSLGVLCYEF 204
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 90/202 (44%), Gaps = 20/202 (9%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAE--FLNEASVMKAFDTHHVV 185
LG G FG VY K+ + + A+KV + E+ E E + +++
Sbjct: 16 LGKGKFGNVYLAREKNSKFI----LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 71
Query: 186 KLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
+LYG + +I+E G + L+ ++ D +R+ ++ E+A+ +
Sbjct: 72 RLYGYFHDSTRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYIT-------ELANAL 121
Query: 246 AYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPES 305
+Y KK +HRD+ N ++ +K+ DFG + ++ R G L ++ PE
Sbjct: 122 SYCHSKKVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLD--YLPPEM 177
Query: 306 LKDGVFTSHSDVWSYGVVLWEM 327
++ + D+WS GV+ +E
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEF 199
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 15/220 (6%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG G+FG V L+++ + + I ++ E A + E+ V++ + L
Sbjct: 13 LGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
+ +ME GG+L +L R E R AE+ + Y
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTE----------ERARFYGAEIVSALEY 120
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLK 307
L + V+RD+ N M+ D +K+ DFG+ ++ K G ++APE L+
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCG--TPEYLAPEVLE 178
Query: 308 DGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV 347
D + D W GVV++EM P+ +E++ +
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMC-GRLPFYNQDHERLFELI 217
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 15/220 (6%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG G+FG V L+++ + + I ++ E A + E+ V++ + L
Sbjct: 13 LGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
+ +ME GG+L +L R E R AE+ + Y
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTE----------ERARFYGAEIVSALEY 120
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLK 307
L + V+RD+ N M+ D +K+ DFG+ ++ K G ++APE L+
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCG--TPEYLAPEVLE 178
Query: 308 DGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV 347
D + D W GVV++EM P+ +E++ +
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMC-GRLPFYNQDHERLFELI 217
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 15/220 (6%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG G+FG V L+++ + + I ++ E A + E+ V++ + L
Sbjct: 13 LGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
+ +ME GG+L +L R E R AE+ + Y
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTE----------ERARFYGAEIVSALEY 120
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLK 307
L + V+RD+ N M+ D +K+ DFG+ ++ K G ++APE L+
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCG--TPEYLAPEVLE 178
Query: 308 DGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV 347
D + D W GVV++EM P+ +E++ +
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMC-GRLPFYNQDHERLFELI 217
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 98/232 (42%), Gaps = 16/232 (6%)
Query: 117 VLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVM 176
V ++ L LG G+FG V L+K+ + + I ++ E A L E V+
Sbjct: 7 VTMNEFEYLKLLGKGTFGKVI--LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVL 64
Query: 177 KAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQ 236
+ + L + +ME GG+L +L R +E R
Sbjct: 65 QNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSE----------DRARF 114
Query: 237 MAAEVADGMAYL-ADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGF 295
AE+ + YL ++K V+RDL N M+ D +K+ DFG+ ++ + K G
Sbjct: 115 YGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCG- 173
Query: 296 LPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV 347
++APE L+D + D W GVV++EM P+ +E++ +
Sbjct: 174 -TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC-GRLPFYNQDHEKLFELI 223
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 100/216 (46%), Gaps = 36/216 (16%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTH- 182
+ +++G GS+ + R + K A+K+ ++ S+R+ E E ++ + H
Sbjct: 26 VKEDIGVGSYSVCKRCIHK----ATNMEFAVKIIDK--SKRDPTE---EIEILLRYGQHP 76
Query: 183 HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVA 242
+++ L V +G V+ ELM GG+L + + + +E + T+++ ++
Sbjct: 77 NIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVE------ 130
Query: 243 DGMAYLADKKFVHRDLAARNCMVADDL----TVKVGDFGMTRDIYETEYYRKGSRGFL-- 296
YL + VHRDL N + D+ ++++ DFG + + + G L
Sbjct: 131 ----YLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL-------RAENGLLMT 179
Query: 297 ---PVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
++APE L+ + + D+WS GV+L+ M T
Sbjct: 180 PCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLT 215
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 15/220 (6%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG G+FG V L+++ + + I ++ E A + E+ V++ + L
Sbjct: 13 LGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
+ +ME GG+L +L R E R AE+ + Y
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTE----------ERARFYGAEIVSALEY 120
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLK 307
L + V+RD+ N M+ D +K+ DFG+ ++ K G ++APE L+
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCG--TPEYLAPEVLE 178
Query: 308 DGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV 347
D + D W GVV++EM P+ +E++ +
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMC-GRLPFYNQDHERLFELI 217
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 98/232 (42%), Gaps = 16/232 (6%)
Query: 117 VLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVM 176
V ++ L LG G+FG V L+K+ + + I ++ E A L E V+
Sbjct: 6 VTMNEFEYLKLLGKGTFGKVI--LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVL 63
Query: 177 KAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQ 236
+ + L + +ME GG+L +L R +E R
Sbjct: 64 QNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSE----------DRARF 113
Query: 237 MAAEVADGMAYL-ADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGF 295
AE+ + YL ++K V+RDL N M+ D +K+ DFG+ ++ + K G
Sbjct: 114 YGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCG- 172
Query: 296 LPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV 347
++APE L+D + D W GVV++EM P+ +E++ +
Sbjct: 173 -TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC-GRLPFYNQDHEKLFELI 222
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 99/237 (41%), Gaps = 16/237 (6%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLN 171
K V ++ L LG G+FG V L+K+ + + I ++ E A L
Sbjct: 140 KPKHRVTMNEFEYLKLLGKGTFGKVI--LVKEKATGRYYAMKILKKEVIVAKDEVAHTLT 197
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
E V++ + L + +ME GG+L +L R +E
Sbjct: 198 ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSE---------- 247
Query: 232 SRILQMAAEVADGMAYL-ADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRK 290
R AE+ + YL ++K V+RDL N M+ D +K+ DFG+ ++ + K
Sbjct: 248 DRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMK 307
Query: 291 GSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV 347
G ++APE L+D + D W GVV++EM P+ +E++ +
Sbjct: 308 TFCG--TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC-GRLPFYNQDHEKLFELI 361
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 15/220 (6%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG G+FG V L+++ + + I ++ E A + E+ V++ + L
Sbjct: 13 LGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
+ +ME GG+L +L R E R AE+ + Y
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTE----------ERARFYGAEIVSALEY 120
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLK 307
L + V+RD+ N M+ D +K+ DFG+ ++ K G ++APE L+
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCG--TPEYLAPEVLE 178
Query: 308 DGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV 347
D + D W GVV++EM P+ +E++ +
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMC-GRLPFYNQDHERLFELI 217
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 90/216 (41%), Gaps = 29/216 (13%)
Query: 120 SKVTILDELGNGSFGLVYRGLIKDFRSLAEHPC-----AIKVANENA--SEREKAEFLNE 172
S L +G GSFG V LA H A+KV + A ++E+ ++E
Sbjct: 38 SDFHFLKVIGKGSFGKVL---------LARHKAEEVFYAVKVLQKKAILKKKEEKHIMSE 88
Query: 173 ASVM-KAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
+V+ K +V L+ + +++ + GG+L +L+ R E
Sbjct: 89 RNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLE---------- 138
Query: 232 SRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKG 291
R AAE+A + YL V+RDL N ++ + + DFG+ ++ E+
Sbjct: 139 PRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKE--NIEHNSTT 196
Query: 292 SRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEM 327
S ++APE L + D W G VL+EM
Sbjct: 197 STFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEM 232
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 95/215 (44%), Gaps = 24/215 (11%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAE--FLNEASVMKAFDTHHVV 185
LG G FG VY L ++ +S + A+KV + E+ E E + +++
Sbjct: 20 LGKGKFGNVY--LARERQS--KFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNIL 75
Query: 186 KLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
+LYG + +I+E L R + + D +R+ ++ E+A+ +
Sbjct: 76 RLYGYFHDATRVYLILEY---APLGTVYRELQKLSRFDEQRTATYIT-------ELANAL 125
Query: 246 AYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPES 305
+Y K+ +HRD+ N ++ + +K+ DFG + ++ R G L ++ PE
Sbjct: 126 SYCHSKRVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRTTLCGTLD--YLPPEM 181
Query: 306 LKDGVFTSHSDVWSYGVVLWE----MATLASQPYQ 336
++ + D+WS GV+ +E M + YQ
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQ 216
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 97/208 (46%), Gaps = 24/208 (11%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHH 183
+ +ELG G+F +V R + + E+ I + + S R+ + EA + + +
Sbjct: 8 LFEELGKGAFSVVRRCM--KIPTGQEYAAKI-INTKKLSARDHQKLEREARICRLLKHPN 64
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
+V+L+ +SE ++ +L+ GG+L + + +E D S +Q ++ +
Sbjct: 65 IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADA-------SHCIQ---QILE 114
Query: 244 GMAYLADKKFVHRDLAARNCMVADD---LTVKVGDFGMTRDIYETE---YYRKGSRGFLP 297
+ + VHRDL N ++A VK+ DFG+ ++ + + G+ G+L
Sbjct: 115 SVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYL- 173
Query: 298 VRWMAPESLKDGVFTSHSDVWSYGVVLW 325
+PE L+ + D+W+ GV+L+
Sbjct: 174 ----SPEVLRKDPYGKPVDMWACGVILY 197
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 15/220 (6%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG G+FG V L+++ + + I ++ E A + E+ V++ + L
Sbjct: 18 LGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 75
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
+ +ME GG+L +L R E R AE+ + Y
Sbjct: 76 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTE----------ERARFYGAEIVSALEY 125
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLK 307
L + V+RD+ N M+ D +K+ DFG+ ++ K G ++APE L+
Sbjct: 126 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCG--TPEYLAPEVLE 183
Query: 308 DGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV 347
D + D W GVV++EM P+ +E++ +
Sbjct: 184 DNDYGRAVDWWGLGVVMYEMMC-GRLPFYNQDHERLFELI 222
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 96/215 (44%), Gaps = 24/215 (11%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAE--FLNEASVMKAFDTHHVV 185
LG G FG VY L ++ +S + A+KV + E+ E E + +++
Sbjct: 20 LGKGKFGNVY--LARERQS--KFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNIL 75
Query: 186 KLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
+LYG + +I+E G + L+ + D +R+ ++ E+A+ +
Sbjct: 76 RLYGYFHDATRVYLILEYAPLGTVYRELQKL---SRFDEQRTATYIT-------ELANAL 125
Query: 246 AYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPES 305
+Y K+ +HRD+ N ++ + +K+ DFG + ++ R G L ++ PE
Sbjct: 126 SYCHSKRVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRDTLCGTLD--YLPPEM 181
Query: 306 LKDGVFTSHSDVWSYGVVLWE----MATLASQPYQ 336
++ + D+WS GV+ +E M + YQ
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQ 216
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 99/237 (41%), Gaps = 16/237 (6%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLN 171
K V ++ L LG G+FG V L+K+ + + I ++ E A L
Sbjct: 143 KPKHRVTMNEFEYLKLLGKGTFGKVI--LVKEKATGRYYAMKILKKEVIVAKDEVAHTLT 200
Query: 172 EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
E V++ + L + +ME GG+L +L R +E
Sbjct: 201 ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSE---------- 250
Query: 232 SRILQMAAEVADGMAYL-ADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRK 290
R AE+ + YL ++K V+RDL N M+ D +K+ DFG+ ++ + K
Sbjct: 251 DRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMK 310
Query: 291 GSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV 347
G ++APE L+D + D W GVV++EM P+ +E++ +
Sbjct: 311 TFCG--TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC-GRLPFYNQDHEKLFELI 364
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 98/227 (43%), Gaps = 32/227 (14%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIK-VANENASEREKAEFL 170
K WEV + L +G+G++G V F + H A+K ++ S
Sbjct: 15 KTIWEV-PERYQNLSPVGSGAYGSVCAA----FDTKTGHRVAVKKLSRPFQSIIHAKRTY 69
Query: 171 NEASVMKAFDTHHVVKLYGVVS------EGNPTLVIMELMGGGDLKNYLRSCRPDAETDV 224
E ++K +V+ L V + E N ++ LMG DL N ++ C+ + V
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHV 127
Query: 225 ERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYE 284
+ + ++ G+ Y+ +HRDL N V +D +K+ DFG+ R
Sbjct: 128 QF----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 173
Query: 285 TEYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ GF+ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 174 --HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 97/208 (46%), Gaps = 24/208 (11%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHH 183
+ +ELG G+F +V R + + E+ I + + S R+ + EA + + +
Sbjct: 8 LFEELGKGAFSVVRRCM--KIPTGQEYAAKI-INTKKLSARDHQKLEREARICRLLKHPN 64
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
+V+L+ +SE ++ +L+ GG+L + + +E D S +Q ++ +
Sbjct: 65 IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADA-------SHCIQ---QILE 114
Query: 244 GMAYLADKKFVHRDLAARNCMVADD---LTVKVGDFGMTRDIYETE---YYRKGSRGFLP 297
+ + VHRDL N ++A VK+ DFG+ ++ + + G+ G+L
Sbjct: 115 SVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYL- 173
Query: 298 VRWMAPESLKDGVFTSHSDVWSYGVVLW 325
+PE L+ + D+W+ GV+L+
Sbjct: 174 ----SPEVLRKDPYGKPVDMWACGVILY 197
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 88/204 (43%), Gaps = 18/204 (8%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
+G G+FG V L++ S + + E + A F E +M ++ VV+L
Sbjct: 83 IGRGAFGEVQ--LVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL 140
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAY 247
+ + ++ME M GGDL N + + DV P ++ AEV +
Sbjct: 141 FCAFQDDKYLYMVMEYMPGGDLVNLM------SNYDV---PEKWAKFY--TAEVVLALDA 189
Query: 248 LADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLK 307
+ +HRD+ N ++ +K+ DFG + ET + P +++PE LK
Sbjct: 190 IHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTP-DYISPEVLK 248
Query: 308 ----DGVFTSHSDVWSYGVVLWEM 327
DG + D WS GV L+EM
Sbjct: 249 SQGGDGYYGRECDWWSVGVFLFEM 272
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 94/229 (41%), Gaps = 40/229 (17%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASER-EKAEFLNEASVMKAFDTHHVVK 186
+G GS+G VY K+ E AIK N + + L E +++ + ++++
Sbjct: 34 IGRGSYGYVYLAYDKN----TEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIR 89
Query: 187 LYGVVSEGN----PTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVA 242
LY ++ + L I+ + DLK ++ P T+ I + +
Sbjct: 90 LYDLIIPDDLLKFDELYIVLEIADSDLKKLFKT--PIFLTE--------EHIKTILYNLL 139
Query: 243 DGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTR------------DIYETE---- 286
G ++ + +HRDL NC++ D +VKV DFG+ R D+ E E
Sbjct: 140 LGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGP 199
Query: 287 ---YYRKGSRGFLPVRWM-APE-SLKDGVFTSHSDVWSYGVVLWEMATL 330
+K + RW APE L +T D+WS G + E+ +
Sbjct: 200 HNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNM 248
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 98/227 (43%), Gaps = 32/227 (14%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIK-VANENASEREKAEFL 170
K WEV + L +G+G++G V F + H A+K ++ S
Sbjct: 11 KTIWEV-PERYQNLSPVGSGAYGSVCAA----FDTKTGHRVAVKKLSRPFQSIIHAKRTY 65
Query: 171 NEASVMKAFDTHHVVKLYGVVS------EGNPTLVIMELMGGGDLKNYLRSCRPDAETDV 224
E ++K +V+ L V + E N ++ LMG DL N ++ C+ + V
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHV 123
Query: 225 ERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYE 284
+ + ++ G+ Y+ +HRDL N V +D +K+ DFG+ R
Sbjct: 124 QF----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 169
Query: 285 TEYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ GF+ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 170 --HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 98/227 (43%), Gaps = 32/227 (14%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIK-VANENASEREKAEFL 170
K WEV + L +G+G++G V F + H A+K ++ S
Sbjct: 15 KTIWEV-PERYQNLSPVGSGAYGSVCAA----FDTKTGHRVAVKKLSRPFQSIIHAKRTY 69
Query: 171 NEASVMKAFDTHHVVKLYGVVS------EGNPTLVIMELMGGGDLKNYLRSCRPDAETDV 224
E ++K +V+ L V + E N ++ LMG DL N ++ C+ + V
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHV 127
Query: 225 ERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYE 284
+ + ++ G+ Y+ +HRDL N V +D +K+ DFG+ R
Sbjct: 128 QF----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 173
Query: 285 TEYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ GF+ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 174 --HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 96/221 (43%), Gaps = 49/221 (22%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVAN---ENASEREKAEFLNEASVMKAFDT 181
L +G+G+ G+V + + ++ E AIK + +N + ++A E +MK +
Sbjct: 29 LKPIGSGAQGIV----VAAYDAILERNVAIKKLSRPFQNQTHAKRA--YRELVLMKVVNH 82
Query: 182 HHVVKLYGVVS------EGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRIL 235
+++ L V + E ++MELM +L ++ E D ER L ++L
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLSQVIQ-----MELDHERMSYLLYQML 136
Query: 236 QMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRD---------IYETE 286
G+ +L +HRDL N +V D T+K+ DFG+ R T
Sbjct: 137 V-------GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTR 189
Query: 287 YYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEM 327
YYR APE + + + D+WS GV++ EM
Sbjct: 190 YYR------------APEVILGMGYKENVDIWSVGVIMGEM 218
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 89/202 (44%), Gaps = 20/202 (9%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAE--FLNEASVMKAFDTHHVV 185
LG G FG VY K + + A+KV + E+ E E + +++
Sbjct: 16 LGKGKFGNVYLAREKQSKFI----LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 71
Query: 186 KLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
+LYG + +I+E G + L+ ++ D +R+ ++ E+A+ +
Sbjct: 72 RLYGYFHDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYIT-------ELANAL 121
Query: 246 AYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPES 305
+Y K+ +HRD+ N ++ +K+ DFG + ++ R G L ++ PE
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLD--YLPPEM 177
Query: 306 LKDGVFTSHSDVWSYGVVLWEM 327
++ + D+WS GV+ +E
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEF 199
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 98/230 (42%), Gaps = 22/230 (9%)
Query: 100 QLMGGDDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANE 159
+L ++ KK W + I LG G FG VY K + + A+KV +
Sbjct: 16 ELASKQKNEESKKRQWAL--EDFEIGRPLGKGKFGNVYLAREKQSKFI----LALKVLFK 69
Query: 160 NASEREKAE--FLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCR 217
E+ E E + ++++LYG + +I+E G + L+
Sbjct: 70 AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL- 128
Query: 218 PDAETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFG 277
++ D +R+ ++ E+A+ ++Y K+ +HRD+ N ++ +K+ DFG
Sbjct: 129 --SKFDEQRTATYIT-------ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 179
Query: 278 MTRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEM 327
+ ++ R G L ++ PE ++ + D+WS GV+ +E
Sbjct: 180 WS--VHAPSSRRTTLCGTL--DYLPPEMIEGRMHDEKVDLWSLGVLCYEF 225
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 94/219 (42%), Gaps = 22/219 (10%)
Query: 111 KKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAE-- 168
KK W + I LG G FG VY K + + A+KV + E+ E
Sbjct: 4 KKRQWAL--EDFEIGRPLGKGKFGNVYLAREKQSKFI----LALKVLFKAQLEKAGVEHQ 57
Query: 169 FLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSP 228
E + ++++LYG + +I+E G + R + ++ D +R+
Sbjct: 58 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV---YRELQKLSKFDEQRTA 114
Query: 229 PTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY 288
++ E+A+ ++Y K+ +HRD+ N ++ +K+ DFG + ++
Sbjct: 115 TYIT-------ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSR 165
Query: 289 RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEM 327
R G L ++ PE ++ + D+WS GV+ +E
Sbjct: 166 RXXLCGTLD--YLPPEMIEGRMHDEKVDLWSLGVLCYEF 202
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 89/202 (44%), Gaps = 20/202 (9%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAE--FLNEASVMKAFDTHHVV 185
LG G FG VY K + + A+KV + E+ E E + +++
Sbjct: 19 LGKGKFGNVYLAREKQSKFI----LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 74
Query: 186 KLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
+LYG + +I+E G + R + ++ D +R+ ++ E+A+ +
Sbjct: 75 RLYGYFHDATRVYLILEYAPLGTV---YRELQKLSKFDEQRTATYIT-------ELANAL 124
Query: 246 AYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPES 305
+Y K+ +HRD+ N ++ +K+ DFG + ++ R G L ++ PE
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLD--YLPPEM 180
Query: 306 LKDGVFTSHSDVWSYGVVLWEM 327
++ + D+WS GV+ +E
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEF 202
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 94/219 (42%), Gaps = 22/219 (10%)
Query: 111 KKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAE-- 168
KK W + I LG G FG VY K + + A+KV + E+ E
Sbjct: 1 KKRQWAL--EDFEIGRPLGKGKFGNVYLAREKQSKFI----LALKVLFKAQLEKAGVEHQ 54
Query: 169 FLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSP 228
E + ++++LYG + +I+E G + R + ++ D +R+
Sbjct: 55 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV---YRELQKLSKFDEQRTA 111
Query: 229 PTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY 288
++ E+A+ ++Y K+ +HRD+ N ++ +K+ DFG + ++
Sbjct: 112 TYIT-------ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSR 162
Query: 289 RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEM 327
R G L ++ PE ++ + D+WS GV+ +E
Sbjct: 163 RTDLCGTLD--YLPPEMIEGRMHDEKVDLWSLGVLCYEF 199
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 95/222 (42%), Gaps = 28/222 (12%)
Query: 127 ELGNGSFGLVYRGLIKDFRSLAEHP-CAIKVANENASEREKAEFLNEASVMKAFDTHHVV 185
E+G GSF VY+GL D + E C ++ SER++ F EA +K ++V
Sbjct: 33 EIGRGSFKTVYKGL--DTETTVEVAWCELQDRKLTKSERQR--FKEEAEXLKGLQHPNIV 88
Query: 186 KLY----GVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEV 241
+ Y V +++ EL G LK YL+ + + V RS ++
Sbjct: 89 RFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKV-XKIKVLRS---------WCRQI 138
Query: 242 ADGMAYLADKK--FVHRDLAARNCMVADDL-TVKVGDFGMTRDIYETEYYRKGSRGFLPV 298
G+ +L + +HRDL N + +VK+GD G+ + + K G
Sbjct: 139 LKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA--TLKRASFAKAVIG--TP 194
Query: 299 RWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSN 340
+ APE ++ + DV+++G E AT + PY N
Sbjct: 195 EFXAPEXYEEK-YDESVDVYAFGXCXLEXAT-SEYPYSECQN 234
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 98/230 (42%), Gaps = 22/230 (9%)
Query: 100 QLMGGDDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANE 159
+L ++ KK W + I LG G FG VY K + + A+KV +
Sbjct: 16 ELASKQKNEESKKRQWAL--EDFEIGRPLGKGKFGNVYLAREKQSKFI----LALKVLFK 69
Query: 160 NASEREKAE--FLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCR 217
E+ E E + ++++LYG + +I+E G + L+
Sbjct: 70 AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL- 128
Query: 218 PDAETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFG 277
++ D +R+ ++ E+A+ ++Y K+ +HRD+ N ++ +K+ DFG
Sbjct: 129 --SKFDEQRTATYIT-------ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 179
Query: 278 MTRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEM 327
+ ++ R G L ++ PE ++ + D+WS GV+ +E
Sbjct: 180 WS--VHAPSSRRDDLCGTL--DYLPPEMIEGRMHDEKVDLWSLGVLCYEF 225
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 92/216 (42%), Gaps = 21/216 (9%)
Query: 119 RSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVAN--ENASEREKAEFLNEASVM 176
R IL +G G+FG V +K+ A+ A+K+ N E E A F E V+
Sbjct: 73 REDFEILKVIGRGAFGEVAVVKLKN----ADKVFAMKILNKWEMLKRAETACFREERDVL 128
Query: 177 KAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQ 236
D+ + L+ + N ++M+ GGDL L +R P ++R
Sbjct: 129 VNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFE-------DRLPEEMARFY- 180
Query: 237 MAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFL 296
AE+ + + +VHRD+ N ++ + +++ DFG + E +
Sbjct: 181 -LAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGT 239
Query: 297 PVRWMAPESLK-----DGVFTSHSDVWSYGVVLWEM 327
P +++PE L+ G + D WS GV ++EM
Sbjct: 240 P-DYISPEILQAMEGGKGRYGPECDWWSLGVCMYEM 274
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 89/202 (44%), Gaps = 20/202 (9%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAE--FLNEASVMKAFDTHHVV 185
LG G FG VY K + + A+KV + E+ E E + +++
Sbjct: 15 LGKGKFGNVYLAREKQSKFI----LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 70
Query: 186 KLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
+LYG + +I+E G + L+ ++ D +R+ ++ E+A+ +
Sbjct: 71 RLYGYFHDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYIT-------ELANAL 120
Query: 246 AYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPES 305
+Y K+ +HRD+ N ++ +K+ DFG + ++ R G L ++ PE
Sbjct: 121 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLD--YLPPEM 176
Query: 306 LKDGVFTSHSDVWSYGVVLWEM 327
++ + D+WS GV+ +E
Sbjct: 177 IEGRMHDEKVDLWSLGVLCYEF 198
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 94/219 (42%), Gaps = 22/219 (10%)
Query: 111 KKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAE-- 168
KK W + I LG G FG VY K + + A+KV + E+ E
Sbjct: 3 KKRQWAL--EDFEIGRPLGKGKFGNVYLAREKQSKFI----LALKVLFKAQLEKAGVEHQ 56
Query: 169 FLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSP 228
E + ++++LYG + +I+E G + R + ++ D +R+
Sbjct: 57 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV---YRELQKLSKFDEQRTA 113
Query: 229 PTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY 288
++ E+A+ ++Y K+ +HRD+ N ++ +K+ DFG + ++
Sbjct: 114 TYIT-------ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSR 164
Query: 289 RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEM 327
R G L ++ PE ++ + D+WS GV+ +E
Sbjct: 165 RXXLCGTLD--YLPPEMIEGRMHDEKVDLWSLGVLCYEF 201
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 91/217 (41%), Gaps = 18/217 (8%)
Query: 111 KKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFL 170
KK W + I LG G FG VY K + + K E A + +
Sbjct: 4 KKRQWAL--EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLR 59
Query: 171 NEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPT 230
E + ++++LYG + +I+E G + R + ++ D +R+
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV---YRELQKLSKFDEQRTATY 116
Query: 231 LSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRK 290
++ E+A+ ++Y K+ +HRD+ N ++ +K+ DFG + ++ R
Sbjct: 117 IT-------ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRT 167
Query: 291 GSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEM 327
G L ++ PE ++ + D+WS GV+ +E
Sbjct: 168 TLCGTLD--YLPPEMIEGRMHDEKVDLWSLGVLCYEF 202
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 94/219 (42%), Gaps = 22/219 (10%)
Query: 111 KKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAE-- 168
KK W + I LG G FG VY K + + A+KV + E+ E
Sbjct: 4 KKRQWAL--EDFEIGRPLGKGKFGNVYLAREKQSKFI----LALKVLFKAQLEKAGVEHQ 57
Query: 169 FLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSP 228
E + ++++LYG + +I+E G + R + ++ D +R+
Sbjct: 58 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV---YRELQKLSKFDEQRTA 114
Query: 229 PTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY 288
++ E+A+ ++Y K+ +HRD+ N ++ +K+ DFG + ++
Sbjct: 115 TYIT-------ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSR 165
Query: 289 RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEM 327
R G L ++ PE ++ + D+WS GV+ +E
Sbjct: 166 RTTLCGTLD--YLPPEMIEGRMHDEKVDLWSLGVLCYEF 202
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 94/219 (42%), Gaps = 22/219 (10%)
Query: 111 KKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAE-- 168
KK W + I LG G FG VY K + + A+KV + E+ E
Sbjct: 6 KKRQWAL--EDFEIGRPLGKGKFGNVYLAREKQSKFI----LALKVLFKAQLEKAGVEHQ 59
Query: 169 FLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSP 228
E + ++++LYG + +I+E G + R + ++ D +R+
Sbjct: 60 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV---YRELQKLSKFDEQRTA 116
Query: 229 PTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY 288
++ E+A+ ++Y K+ +HRD+ N ++ +K+ DFG + ++
Sbjct: 117 TYIT-------ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSR 167
Query: 289 RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEM 327
R G L ++ PE ++ + D+WS GV+ +E
Sbjct: 168 RTDLCGTLD--YLPPEMIEGRMHDEKVDLWSLGVLCYEF 204
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 94/219 (42%), Gaps = 22/219 (10%)
Query: 111 KKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAE-- 168
KK W + I LG G FG VY K + + A+KV + E+ E
Sbjct: 2 KKRQWAL--EDFEIGRPLGKGKFGNVYLAREKQSKFI----LALKVLFKAQLEKAGVEHQ 55
Query: 169 FLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSP 228
E + ++++LYG + +I+E G + R + ++ D +R+
Sbjct: 56 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV---YRELQKLSKFDEQRTA 112
Query: 229 PTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY 288
++ E+A+ ++Y K+ +HRD+ N ++ +K+ DFG + ++
Sbjct: 113 TYIT-------ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSR 163
Query: 289 RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEM 327
R G L ++ PE ++ + D+WS GV+ +E
Sbjct: 164 RTDLCGTLD--YLPPEMIEGRMHDEKVDLWSLGVLCYEF 200
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 94/219 (42%), Gaps = 22/219 (10%)
Query: 111 KKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAE-- 168
KK W + I LG G FG VY K + + A+KV + E+ E
Sbjct: 6 KKRQWAL--EDFEIGRPLGKGKFGNVYLAREKQSKFI----LALKVLFKAQLEKAGVEHQ 59
Query: 169 FLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSP 228
E + ++++LYG + +I+E G + R + ++ D +R+
Sbjct: 60 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV---YRELQKLSKFDEQRTA 116
Query: 229 PTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY 288
++ E+A+ ++Y K+ +HRD+ N ++ +K+ DFG + ++
Sbjct: 117 TYIT-------ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSR 167
Query: 289 RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEM 327
R G L ++ PE ++ + D+WS GV+ +E
Sbjct: 168 RTTLCGTLD--YLPPEMIEGRMHDEKVDLWSLGVLCYEF 204
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 98/230 (42%), Gaps = 22/230 (9%)
Query: 100 QLMGGDDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANE 159
+L ++ KK W + I LG G FG VY K + + A+KV +
Sbjct: 7 ELASKQKNEESKKRQWAL--EDFEIGRPLGKGKFGNVYLAREKQSKFI----LALKVLFK 60
Query: 160 NASEREKAE--FLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCR 217
E+ E E + ++++LYG + +I+E G + R +
Sbjct: 61 AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV---YRELQ 117
Query: 218 PDAETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFG 277
++ D +R+ ++ E+A+ ++Y K+ +HRD+ N ++ +K+ DFG
Sbjct: 118 KLSKFDEQRTATYIT-------ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 170
Query: 278 MTRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEM 327
+ ++ R G L ++ PE ++ + D+WS GV+ +E
Sbjct: 171 WS--VHAPSSRRTTLCGTLD--YLPPEMIEGRMHDEKVDLWSLGVLCYEF 216
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 94/219 (42%), Gaps = 22/219 (10%)
Query: 111 KKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAE-- 168
KK W + I LG G FG VY K + + A+KV + E+ E
Sbjct: 2 KKRQWAL--EDFEIGRPLGKGKFGNVYLAREKQSKFI----LALKVLFKAQLEKAGVEHQ 55
Query: 169 FLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSP 228
E + ++++LYG + +I+E G + R + ++ D +R+
Sbjct: 56 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV---YRELQKLSKFDEQRTA 112
Query: 229 PTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY 288
++ E+A+ ++Y K+ +HRD+ N ++ +K+ DFG + ++
Sbjct: 113 TYIT-------ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSR 163
Query: 289 RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEM 327
R G L ++ PE ++ + D+WS GV+ +E
Sbjct: 164 RDTLCGTLD--YLPPEMIEGRMHDEKVDLWSLGVLCYEF 200
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 89/202 (44%), Gaps = 20/202 (9%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAE--FLNEASVMKAFDTHHVV 185
LG G FG VY K + + A+KV + E+ E E + +++
Sbjct: 16 LGKGKFGNVYLAREKQSKFI----LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 71
Query: 186 KLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
+LYG + +I+E G + L+ ++ D +R+ ++ E+A+ +
Sbjct: 72 RLYGYFHDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYIT-------ELANAL 121
Query: 246 AYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPES 305
+Y K+ +HRD+ N ++ +K+ DFG + ++ R G L ++ PE
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLD--YLPPEM 177
Query: 306 LKDGVFTSHSDVWSYGVVLWEM 327
++ + D+WS GV+ +E
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEF 199
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 89/202 (44%), Gaps = 20/202 (9%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAE--FLNEASVMKAFDTHHVV 185
LG G FG VY K + + A+KV + E+ E E + +++
Sbjct: 16 LGKGKFGNVYLAREKQSKFI----LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 71
Query: 186 KLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
+LYG + +I+E G + L+ ++ D +R+ ++ E+A+ +
Sbjct: 72 RLYGYFHDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYIT-------ELANAL 121
Query: 246 AYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPES 305
+Y K+ +HRD+ N ++ +K+ DFG + ++ R G L ++ PE
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLD--YLPPEM 177
Query: 306 LKDGVFTSHSDVWSYGVVLWEM 327
++ + D+WS GV+ +E
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEF 199
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 89/202 (44%), Gaps = 20/202 (9%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAE--FLNEASVMKAFDTHHVV 185
LG G FG VY K + + A+KV + E+ E E + +++
Sbjct: 16 LGKGKFGNVYLAREKQSKFI----LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 71
Query: 186 KLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
+LYG + +I+E G + L+ ++ D +R+ ++ E+A+ +
Sbjct: 72 RLYGYFHDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYIT-------ELANAL 121
Query: 246 AYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPES 305
+Y K+ +HRD+ N ++ +K+ DFG + ++ R G L ++ PE
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTXLCGTLD--YLPPEM 177
Query: 306 LKDGVFTSHSDVWSYGVVLWEM 327
++ + D+WS GV+ +E
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEF 199
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 89/202 (44%), Gaps = 20/202 (9%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAE--FLNEASVMKAFDTHHVV 185
LG G FG VY K + + A+KV + E+ E E + +++
Sbjct: 16 LGKGKFGNVYLAREKQSKFI----LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 71
Query: 186 KLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
+LYG + +I+E G + L+ ++ D +R+ ++ E+A+ +
Sbjct: 72 RLYGYFHDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYIT-------ELANAL 121
Query: 246 AYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPES 305
+Y K+ +HRD+ N ++ +K+ DFG + ++ R G L ++ PE
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLD--YLPPEM 177
Query: 306 LKDGVFTSHSDVWSYGVVLWEM 327
++ + D+WS GV+ +E
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEF 199
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 89/202 (44%), Gaps = 20/202 (9%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAE--FLNEASVMKAFDTHHVV 185
LG G FG VY K + + A+KV + E+ E E + +++
Sbjct: 13 LGKGKFGNVYLAREKQRKFI----LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 68
Query: 186 KLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
+LYG + +I+E G + L+ ++ D +R+ ++ E+A+ +
Sbjct: 69 RLYGYFHDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYIT-------ELANAL 118
Query: 246 AYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPES 305
+Y K+ +HRD+ N ++ +K+ DFG + ++ R G L ++ PE
Sbjct: 119 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLD--YLPPEM 174
Query: 306 LKDGVFTSHSDVWSYGVVLWEM 327
++ + D+WS GV+ +E
Sbjct: 175 IEGRMHDEKVDLWSLGVLCYEF 196
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 103/227 (45%), Gaps = 29/227 (12%)
Query: 117 VLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVM 176
+ ++ ++ ++G G +G V+ G + KVA + E+A + E +
Sbjct: 34 TIAKQIQMVKQIGKGRYGEVWMGKWR----------GEKVAVKVFFTTEEASWFRETEIY 83
Query: 177 KAFDTHHVVKLYGVVSEGNPT------LVIMELMGGGDLKNYLRSCRPDAETDVERSPPT 230
+ H L + ++ T +I + G L +YL+S DA++ ++ + +
Sbjct: 84 QTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSS 143
Query: 231 LSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGM-------TRDIY 283
+S + + E+ A HRDL ++N +V + T + D G+ T ++
Sbjct: 144 VSGLCHLHTEIFSTQGKPA---IAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVD 200
Query: 284 ETEYYRKGSRGFLPVRWMAPESLKDGVFTSH--SDVWSYGVVLWEMA 328
R G++ ++P + ESL F S+ +D++S+G++LWE+A
Sbjct: 201 IPPNTRVGTKRYMPPE-VLDESLNRNHFQSYIMADMYSFGLILWEVA 246
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 93/219 (42%), Gaps = 22/219 (10%)
Query: 111 KKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAE-- 168
KK W + I LG G FG VY K + + A+KV + E+ E
Sbjct: 6 KKRQWAL--EDFEIGRPLGKGKFGNVYLAREKQSKFI----LALKVLFKAQLEKAGVEHQ 59
Query: 169 FLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSP 228
E + ++++LYG + +I+E G + R + ++ D +R+
Sbjct: 60 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV---YRELQKLSKFDEQRTA 116
Query: 229 PTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY 288
++ E+A+ ++Y K+ +HRD+ N ++ +K+ DFG + ++
Sbjct: 117 TYIT-------ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSR 167
Query: 289 RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEM 327
R G L ++ PE ++ D+WS GV+ +E
Sbjct: 168 RTTLCGTLD--YLPPEXIEGRXHDEKVDLWSLGVLCYEF 204
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 88/202 (43%), Gaps = 20/202 (9%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAE--FLNEASVMKAFDTHHVV 185
LG G FG VY K + + A+KV + E+ E E + +++
Sbjct: 20 LGKGKFGNVYLAREKQSKFI----LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 75
Query: 186 KLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
+LYG + +I+E L R + ++ D +R+ ++ E+A+ +
Sbjct: 76 RLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYIT-------ELANAL 125
Query: 246 AYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPES 305
+Y K+ +HRD+ N ++ +K+ DFG + ++ R G L ++ PE
Sbjct: 126 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLD--YLPPEM 181
Query: 306 LKDGVFTSHSDVWSYGVVLWEM 327
++ + D+WS GV+ +E
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEF 203
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 98/227 (43%), Gaps = 32/227 (14%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIK-VANENASEREKAEFL 170
K WEV + L +G+G++G V F + H A+K ++ S
Sbjct: 11 KTIWEV-PERYQNLSPVGSGAYGSVCAA----FDTKTGHRVAVKKLSRPFQSIIHAKRTY 65
Query: 171 NEASVMKAFDTHHVVKLYGVVS------EGNPTLVIMELMGGGDLKNYLRSCRPDAETDV 224
E ++K +V+ L V + E N ++ LMG DL N ++ C+ + V
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHV 123
Query: 225 ERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYE 284
+ + ++ G+ Y+ +HRDL N V +D +K+ DFG+ R
Sbjct: 124 QF----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 169
Query: 285 TEYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 170 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 89/202 (44%), Gaps = 20/202 (9%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAE--FLNEASVMKAFDTHHVV 185
LG G FG VY K + + A+KV + E+ E E + +++
Sbjct: 19 LGKGKFGNVYLAREKQSKFI----LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 74
Query: 186 KLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
+LYG + +I+E G + L+ ++ D +R+ ++ E+A+ +
Sbjct: 75 RLYGYFHDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYIT-------ELANAL 124
Query: 246 AYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPES 305
+Y K+ +HRD+ N ++ +K+ DFG + ++ R G L ++ PE
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLD--YLPPEM 180
Query: 306 LKDGVFTSHSDVWSYGVVLWEM 327
++ + D+WS GV+ +E
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEF 202
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 89/202 (44%), Gaps = 20/202 (9%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAE--FLNEASVMKAFDTHHVV 185
LG G FG VY K + + A+KV + E+ E E + +++
Sbjct: 16 LGKGKFGNVYLAREKQSKFI----LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 71
Query: 186 KLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
+LYG + +I+E G + L+ ++ D +R+ ++ E+A+ +
Sbjct: 72 RLYGYFHDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYIT-------ELANAL 121
Query: 246 AYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPES 305
+Y K+ +HRD+ N ++ +K+ DFG + ++ R G L ++ PE
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTELCGTLD--YLPPEM 177
Query: 306 LKDGVFTSHSDVWSYGVVLWEM 327
++ + D+WS GV+ +E
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEF 199
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 98/227 (43%), Gaps = 32/227 (14%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIK-VANENASEREKAEFL 170
K WEV + L +G+G++G V F + H A+K ++ S
Sbjct: 15 KTIWEV-PERYQNLSPVGSGAYGSVCAA----FDTKTGHRVAVKKLSRPFQSIIHAKRTY 69
Query: 171 NEASVMKAFDTHHVVKLYGVVS------EGNPTLVIMELMGGGDLKNYLRSCRPDAETDV 224
E ++K +V+ L V + E N ++ LMG DL N ++ C+ + V
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHV 127
Query: 225 ERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYE 284
+ + ++ G+ Y+ +HRDL N V +D +K+ DFG+ R
Sbjct: 128 QF----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 173
Query: 285 TEYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 174 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 98/227 (43%), Gaps = 32/227 (14%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIK-VANENASEREKAEFL 170
K WEV + L +G+G++G V F + H A+K ++ S
Sbjct: 35 KTIWEV-PERYQNLSPVGSGAYGSVCAA----FDTKTGHRVAVKKLSRPFQSIIHAKRTY 89
Query: 171 NEASVMKAFDTHHVVKLYGVVS------EGNPTLVIMELMGGGDLKNYLRSCRPDAETDV 224
E ++K +V+ L V + E N ++ LMG DL N ++ C+ + V
Sbjct: 90 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHV 147
Query: 225 ERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYE 284
+ + ++ G+ Y+ +HRDL N V +D +K+ DFG+ R
Sbjct: 148 QF----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 193
Query: 285 TEYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 194 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 238
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 98/227 (43%), Gaps = 32/227 (14%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIK-VANENASEREKAEFL 170
K WEV + L +G+G++G V F + H A+K ++ S
Sbjct: 34 KTIWEV-PERYQNLSPVGSGAYGSVCAA----FDTKTGHRVAVKKLSRPFQSIIHAKRTY 88
Query: 171 NEASVMKAFDTHHVVKLYGVVS------EGNPTLVIMELMGGGDLKNYLRSCRPDAETDV 224
E ++K +V+ L V + E N ++ LMG DL N ++ C+ + V
Sbjct: 89 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHV 146
Query: 225 ERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYE 284
+ + ++ G+ Y+ +HRDL N V +D +K+ DFG+ R
Sbjct: 147 QF----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 192
Query: 285 TEYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 193 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 237
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 96/221 (43%), Gaps = 49/221 (22%)
Query: 125 LDELGNGSFGLV---YRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDT 181
L +G+G+ G+V Y +++ R++A + N+ ++R E + +MK +
Sbjct: 29 LKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELV----LMKVVNH 82
Query: 182 HHVVKLYGVVS------EGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRIL 235
+++ L V + E ++MELM +L ++ E D ER L ++L
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLSQVIQ-----MELDHERMSYLLYQML 136
Query: 236 QMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRD---------IYETE 286
G+ +L +HRDL N +V D T+K+ DFG+ R T
Sbjct: 137 V-------GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTR 189
Query: 287 YYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEM 327
YYR APE + + + D+WS GV++ EM
Sbjct: 190 YYR------------APEVILGMGYKENVDIWSVGVIMGEM 218
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 93/219 (42%), Gaps = 22/219 (10%)
Query: 111 KKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAE-- 168
KK W + I LG G FG VY K + + A+KV + E+ E
Sbjct: 2 KKRQWAL--EDFEIGRPLGKGKFGNVYLAREKQSKFI----LALKVLFKAQLEKAGVEHQ 55
Query: 169 FLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSP 228
E + ++++LYG + +I+E G + R + ++ D +R+
Sbjct: 56 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV---YRELQKLSKFDEQRTA 112
Query: 229 PTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY 288
++ E+A+ ++Y K+ +HRD+ N ++ +K+ DFG + +
Sbjct: 113 TYIT-------ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--CHAPSSR 163
Query: 289 RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEM 327
R G L ++ PE ++ + D+WS GV+ +E
Sbjct: 164 RTTLSGTLD--YLPPEMIEGRMHDEKVDLWSLGVLCYEF 200
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 91/219 (41%), Gaps = 27/219 (12%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG G FG+V+ K + + AIK E + + + E + + +V+
Sbjct: 13 LGRGGFGVVFEAKNK----VDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRY 68
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYL----RSCRPDAETDVERSPPTL-----SRILQMA 238
+ E N T E + K YL + CR + D T+ S L +
Sbjct: 69 FNAWLEKNTT----EKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIF 124
Query: 239 AEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETE----------YY 288
++A+ + +L K +HRDL N D VKVGDFG+ + + E Y
Sbjct: 125 LQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAY 184
Query: 289 RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEM 327
+ + +M+PE + ++ D++S G++L+E+
Sbjct: 185 ARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFEL 223
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 95/226 (42%), Gaps = 41/226 (18%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG G+FG V +K +L AIK +E + + L+E ++ + + +VV+
Sbjct: 14 LGQGAFGQV----VKARNALDSRYYAIKKIRH--TEEKLSTILSEVMLLASLNHQYVVRY 67
Query: 188 YGV-------------VSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRI 234
Y V + + + ME G L + + S + + D
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRD---------EY 118
Query: 235 LQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRG 294
++ ++ + ++Y+ + +HRDL N + + VK+GDFG+ ++++ + K
Sbjct: 119 WRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 295 FLP------------VRWMAPESLK-DGVFTSHSDVWSYGVVLWEM 327
LP ++A E L G + D++S G++ +EM
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM 224
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 98/227 (43%), Gaps = 32/227 (14%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIK-VANENASEREKAEFL 170
K WEV + L +G+G++G V F + H A+K ++ S
Sbjct: 21 KTIWEV-PERYQNLSPVGSGAYGSVCAA----FDTKTGHRVAVKKLSRPFQSIIHAKRTY 75
Query: 171 NEASVMKAFDTHHVVKLYGVVS------EGNPTLVIMELMGGGDLKNYLRSCRPDAETDV 224
E ++K +V+ L V + E N ++ LMG DL N ++ C+ + V
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHV 133
Query: 225 ERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYE 284
+ + ++ G+ Y+ +HRDL N V +D +K+ DFG+ R
Sbjct: 134 QF----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 179
Query: 285 TEYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 180 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 96/227 (42%), Gaps = 32/227 (14%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIK-VANENASEREKAEFL 170
K WEV + L +G+G++G V F + H A+K ++ S
Sbjct: 11 KTIWEV-PERYQNLSPVGSGAYGSVCAA----FDTKTGHRVAVKKLSRPFQSIIHAKRTY 65
Query: 171 NEASVMKAFDTHHVVKLYGVVS------EGNPTLVIMELMGGGDLKNYLRSCRPDAETDV 224
E ++K +V+ L V + E N ++ LMG DL N ++ +
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCAKL------ 118
Query: 225 ERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYE 284
T + + ++ G+ Y+ +HRDL N V +D +K+ DFG+ R
Sbjct: 119 -----TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 169
Query: 285 TEYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 170 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 97/215 (45%), Gaps = 30/215 (13%)
Query: 118 LRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMK 177
+R ++ LG+G+F V+ L+K + L A+K ++ + R+ + NE +V+K
Sbjct: 7 IRKTFIFMEVLGSGAFSEVF--LVK--QRLTGKLFALKCIKKSPAFRDSS-LENEIAVLK 61
Query: 178 AFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQM 237
++V L + ++M+L+ GG+L + + +ER T +
Sbjct: 62 KIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRI----------LERGVYTEKDASLV 111
Query: 238 AAEVADGMAYLADKKFVHRDLAARNCMV---ADDLTVKVGDFGMTR----DIYETEYYRK 290
+V + YL + VHRDL N + ++ + + DFG+++ I T
Sbjct: 112 IQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTAC--- 168
Query: 291 GSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLW 325
G+ G++ APE L ++ D WS GV+ +
Sbjct: 169 GTPGYV-----APEVLAQKPYSKAVDCWSIGVITY 198
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 97/224 (43%), Gaps = 36/224 (16%)
Query: 120 SKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIK---VANENASERE-KAEFLNEASV 175
S+ + E+G G++G VY+ +D S H A+K V N + E ++
Sbjct: 9 SRYEPVAEIGVGAYGTVYKA--RDPHS--GHFVALKSVRVPNGGGGGGGLPISTVREVAL 64
Query: 176 MK---AFDTHHVVKLYGVVS------EGNPTLVIMELMGGGDLKNYLRSCRPD---AETD 223
++ AF+ +VV+L V + E TLV + DL+ YL P AET
Sbjct: 65 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV--DQDLRTYLDKAPPPGLPAET- 121
Query: 224 VERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIY 283
I + + G+ +L VHRDL N +V TVK+ DFG+ R IY
Sbjct: 122 ----------IKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLAR-IY 170
Query: 284 ETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEM 327
Y + + + + APE L + + D+WS G + EM
Sbjct: 171 --SYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 212
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 109/242 (45%), Gaps = 26/242 (10%)
Query: 126 DELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVV 185
D LG G+ V+RG K L AIKV N + R + E V+K + ++V
Sbjct: 15 DILGQGATANVFRGRHKKTGDL----FAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIV 70
Query: 186 KLYGVVSEGNP--TLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
KL+ + E ++IME G L L + ++ P S L + +V
Sbjct: 71 KLFAIEEETTTRHKVLIMEFCPCGSLYTVL-----EEPSNAYGLPE--SEFLIVLRDVVG 123
Query: 244 GMAYLADKKFVHRDLAARNCM--VADD--LTVKVGDFGMTRDIYETEYYRK--GSRGFL- 296
GM +L + VHR++ N M + +D K+ DFG R++ + E + G+ +L
Sbjct: 124 GMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLH 183
Query: 297 PVRWMAPESLKDGV--FTSHSDVWSYGVVLWEMAT--LASQPYQG-LSNEQVL-NWVKGK 350
P + KD + + D+WS GV + AT L +P++G N++V+ + GK
Sbjct: 184 PDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGK 243
Query: 351 SS 352
S
Sbjct: 244 PS 245
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 100/225 (44%), Gaps = 23/225 (10%)
Query: 123 TILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTH 182
T+ + +G GS+G V + K R A K+ + ++ F E +MK+ D
Sbjct: 12 TLENTIGRGSWGEVKIAVQKGTRI---RRAAKKIPKYFVEDVDR--FKQEIEIMKSLDHP 66
Query: 183 HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVA 242
++++LY + ++MEL GG+L + R E+D R + +V
Sbjct: 67 NIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAAR----------IMKDVL 116
Query: 243 DGMAYLADKKFVHRDLAARNCMV---ADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVR 299
+AY HRDL N + + D +K+ DFG+ + R ++ P
Sbjct: 117 SAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMR--TKVGTPY- 173
Query: 300 WMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVL 344
+++P+ L +G++ D WS GV+++ + P+ ++ +V+
Sbjct: 174 YVSPQVL-EGLYGPECDEWSAGVMMYVLLC-GYPPFSAPTDXEVM 216
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 122 VTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDT 181
+T LG GSFG V+R +KD ++ + CA+K R + + E +
Sbjct: 74 MTHQPRLGRGSFGEVHR--MKDKQTGFQ--CAVKKV------RLEVFRVEELVACAGLSS 123
Query: 182 HHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRS--CRPDAETDVERSPPTLSRILQMAA 239
+V LYG V EG + MEL+ GG L ++ C P+ R L
Sbjct: 124 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPE------------DRALYYLG 171
Query: 240 EVADGMAYLADKKFVHRDLAARNCMVADDLT-VKVGDFGMTRDIYETEYYRKGSRG-FLP 297
+ +G+ YL ++ +H D+ A N +++ D + + DFG + + G ++P
Sbjct: 172 QALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP 231
Query: 298 --VRWMAPESLKDGVFTSHSDVWSYGVVLWEM 327
MAPE + + D+WS ++ M
Sbjct: 232 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHM 263
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 92/206 (44%), Gaps = 22/206 (10%)
Query: 123 TILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTH 182
T+ + +G GS+G V + K R A K+ + ++ F E +MK+ D
Sbjct: 29 TLENTIGRGSWGEVKIAVQKGTRI---RRAAKKIPKYFVEDVDR--FKQEIEIMKSLDHP 83
Query: 183 HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVA 242
++++LY + ++MEL GG+L + R E+D R + +V
Sbjct: 84 NIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAAR----------IMKDVL 133
Query: 243 DGMAYLADKKFVHRDLAARNCMV---ADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVR 299
+AY HRDL N + + D +K+ DFG+ + R ++ P
Sbjct: 134 SAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMR--TKVGTPY- 190
Query: 300 WMAPESLKDGVFTSHSDVWSYGVVLW 325
+++P+ L +G++ D WS GV+++
Sbjct: 191 YVSPQVL-EGLYGPECDEWSAGVMMY 215
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 100/230 (43%), Gaps = 31/230 (13%)
Query: 104 GDDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASE 163
G+ +KK + E ++ + LG G+F V K L A+K + A +
Sbjct: 7 GESSSSWKKQA-EDIKKIFEFKETLGTGAFSEVVLAEEKATGKL----FAVKCIPKKALK 61
Query: 164 REKAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETD 223
+++ NE +V++ ++V L + N ++M+L+ GG+L + +
Sbjct: 62 GKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRI---------- 111
Query: 224 VERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMV---ADDLTVKVGDFGMTR 280
VE+ T + +V D + YL VHRDL N + ++ + + DFG+++
Sbjct: 112 VEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSK 171
Query: 281 -----DIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLW 325
D+ T G+ G++ APE L ++ D WS GV+ +
Sbjct: 172 MEGKGDVMSTAC---GTPGYV-----APEVLAQKPYSKAVDCWSIGVIAY 213
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 98/227 (43%), Gaps = 32/227 (14%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIK-VANENASEREKAEFL 170
K WEV + L +G+G++G V F + H A+K ++ S
Sbjct: 25 KTIWEV-PERYQNLAPVGSGAYGSVCAA----FDTKTGHRVAVKKLSRPFQSIIHAKRTY 79
Query: 171 NEASVMKAFDTHHVVKLYGVVS------EGNPTLVIMELMGGGDLKNYLRSCRPDAETDV 224
E ++K +V+ L V + E N ++ LMG DL N ++ C+ + V
Sbjct: 80 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHV 137
Query: 225 ERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYE 284
+ + ++ G+ Y+ +HRDL N V +D +K+ DFG+ R
Sbjct: 138 QF----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 183
Query: 285 TEYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 184 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 228
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 101/230 (43%), Gaps = 43/230 (18%)
Query: 121 KVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFD 180
+V +++ +G G +G V+RGL A+K+ S R++ + E +
Sbjct: 9 QVALVECVGKGRYGEVWRGLWHG------ESVAVKIF----SSRDEQSWFRETEIYNTVL 58
Query: 181 THHVVKLYGVVSE------GNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRI 234
H L + S+ +I G L ++L+ + P L+
Sbjct: 59 LRHDNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQR---------QTLEPHLA-- 107
Query: 235 LQMAAEVADGMAYLADKKF--------VHRDLAARNCMVADDLTVKVGDFGMT-RDIYET 285
L++A A G+A+L + F HRD +RN +V +L + D G+ +
Sbjct: 108 LRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGS 167
Query: 286 EYYRKGSRGFLPV-RWMAPESLKDGV----FTSH--SDVWSYGVVLWEMA 328
+Y G+ + R+MAPE L + + F S+ +D+W++G+VLWE+A
Sbjct: 168 DYLDIGNNPRVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIA 217
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 98/229 (42%), Gaps = 30/229 (13%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANEN--ASEREKAEFL 170
D +E+LR+ +G GSFG V D + + A+K N+ E
Sbjct: 15 DHFEILRA-------IGKGSFGKVCIVQKNDTKKMY----AMKYMNKQKCVERNEVRNVF 63
Query: 171 NEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPT 230
E +M+ + +V L+ + ++++L+ GGDL+ +L+ +V T
Sbjct: 64 KELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQ-------NVHFKEET 116
Query: 231 LSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRK 290
+ + E+ + YL +++ +HRD+ N ++ + V + DF + + E
Sbjct: 117 VKLFI---CELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAA-MLPRETQIT 172
Query: 291 GSRGFLPVRWMAPE---SLKDGVFTSHSDVWSYGVVLWEMATLASQPYQ 336
G P +MAPE S K ++ D WS GV +E+ +PY
Sbjct: 173 TMAGTKP--YMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLR-GRRPYH 218
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 94/219 (42%), Gaps = 22/219 (10%)
Query: 111 KKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAE-- 168
KK W + I LG G FG VY K + + A+KV + E+ E
Sbjct: 4 KKRQWAL--EDFEIGRPLGKGKFGNVYLAREKQSKFI----LALKVLFKAQLEKAGVEHQ 57
Query: 169 FLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSP 228
E + ++++LYG + +I+E G + R + ++ D +R+
Sbjct: 58 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV---YRELQKLSKFDEQRTA 114
Query: 229 PTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY 288
++ E+A+ ++Y K+ +HRD+ N ++ +K+ +FG + ++
Sbjct: 115 TYIT-------ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSR 165
Query: 289 RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEM 327
R G L ++ PE ++ + D+WS GV+ +E
Sbjct: 166 RTTLCGTLD--YLPPEMIEGRMHDEKVDLWSLGVLCYEF 202
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 99/232 (42%), Gaps = 47/232 (20%)
Query: 121 KVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFD 180
++T+L+ +G G +G V+RG S A+K+ S R++ + E +
Sbjct: 9 QITLLECVGKGRYGEVWRG------SWQGENVAVKIF----SSRDEKSWFRETELYNTVM 58
Query: 181 THHVVKLYGVVSE------GNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRI 234
H L + S+ +I G L +YL+ D +
Sbjct: 59 LRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVS-----------C 107
Query: 235 LQMAAEVADGMAYLADKKF--------VHRDLAARNCMVADDLTVKVGDFGMTRDIYETE 286
L++ +A G+A+L + F HRDL ++N +V + + D G+ + ++
Sbjct: 108 LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA--VMHSQ 165
Query: 287 YYRKGSRGFLP----VRWMAPESLKDGV----FTSHS--DVWSYGVVLWEMA 328
+ G P R+MAPE L + + F S+ D+W++G+VLWE+A
Sbjct: 166 STNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA 217
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 94/219 (42%), Gaps = 22/219 (10%)
Query: 111 KKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAE-- 168
KK W + I LG G FG VY K + + A+KV + E+ E
Sbjct: 3 KKRQWAL--EDFEIGRPLGKGKFGNVYLAREKQSKFI----LALKVLFKAQLEKAGVEHQ 56
Query: 169 FLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSP 228
E + ++++LYG + +I+E G + R + ++ D +R+
Sbjct: 57 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV---YRELQKLSKFDEQRTA 113
Query: 229 PTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYY 288
++ E+A+ ++Y K+ +HRD+ N ++ +K+ +FG + ++
Sbjct: 114 TYIT-------ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSR 164
Query: 289 RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEM 327
R G L ++ PE ++ + D+WS GV+ +E
Sbjct: 165 RTTLCGTLD--YLPPEMIEGRMHDEKVDLWSLGVLCYEF 201
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 109/242 (45%), Gaps = 26/242 (10%)
Query: 126 DELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVV 185
D LG G+ V+RG K L AIKV N + R + E V+K + ++V
Sbjct: 15 DILGQGATANVFRGRHKKTGDL----FAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIV 70
Query: 186 KLYGVVSEGNP--TLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
KL+ + E ++IME G L L + ++ P S L + +V
Sbjct: 71 KLFAIEEETTTRHKVLIMEFCPCGSLYTVL-----EEPSNAYGLPE--SEFLIVLRDVVG 123
Query: 244 GMAYLADKKFVHRDLAARNCM--VADD--LTVKVGDFGMTRDIYETEYYRK--GSRGFL- 296
GM +L + VHR++ N M + +D K+ DFG R++ + E + G+ +L
Sbjct: 124 GMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLH 183
Query: 297 PVRWMAPESLKDGV--FTSHSDVWSYGVVLWEMAT--LASQPYQG-LSNEQVL-NWVKGK 350
P + KD + + D+WS GV + AT L +P++G N++V+ + GK
Sbjct: 184 PDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGK 243
Query: 351 SS 352
S
Sbjct: 244 PS 245
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 99/232 (42%), Gaps = 47/232 (20%)
Query: 121 KVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFD 180
++T+L+ +G G +G V+RG S A+K+ S R++ + E +
Sbjct: 38 QITLLECVGKGRYGEVWRG------SWQGENVAVKIF----SSRDEKSWFRETELYNTVM 87
Query: 181 THHVVKLYGVVSE------GNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRI 234
H L + S+ +I G L +YL+ D +
Sbjct: 88 LRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVS-----------C 136
Query: 235 LQMAAEVADGMAYLADKKF--------VHRDLAARNCMVADDLTVKVGDFGMTRDIYETE 286
L++ +A G+A+L + F HRDL ++N +V + + D G+ + ++
Sbjct: 137 LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA--VMHSQ 194
Query: 287 YYRKGSRGFLP----VRWMAPESLKDGV----FTSHS--DVWSYGVVLWEMA 328
+ G P R+MAPE L + + F S+ D+W++G+VLWE+A
Sbjct: 195 STNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA 246
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 97/227 (42%), Gaps = 32/227 (14%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIK-VANENASEREKAEFL 170
K WEV + L +G+G++G V F + H A+K ++ S
Sbjct: 35 KTIWEV-PERYQNLSPVGSGAYGSVCAA----FDTKTGHRVAVKKLSRPFQSIIHAKRTY 89
Query: 171 NEASVMKAFDTHHVVKLYGVVS------EGNPTLVIMELMGGGDLKNYLRSCRPDAETDV 224
E ++K +V+ L V + E N ++ LMG DL N ++ C+ + V
Sbjct: 90 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHV 147
Query: 225 ERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYE 284
+ + ++ G+ Y+ +HRDL N V +D +K+ DFG+ R
Sbjct: 148 QF----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 193
Query: 285 TEYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G + RW APE + + + + + D+WS G ++ E+ T
Sbjct: 194 --HTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 238
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 122 VTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDT 181
+T +G GSFG V+R +KD ++ + CA+K R + + E +
Sbjct: 60 MTHQPRVGRGSFGEVHR--MKDKQTGFQ--CAVKKV------RLEVFRVEELVACAGLSS 109
Query: 182 HHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRS--CRPDAETDVERSPPTLSRILQMAA 239
+V LYG V EG + MEL+ GG L ++ C P+ R L
Sbjct: 110 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPE------------DRALYYLG 157
Query: 240 EVADGMAYLADKKFVHRDLAARNCMVADDLT-VKVGDFGMTRDIYETEYYRKGSRG-FLP 297
+ +G+ YL ++ +H D+ A N +++ D + + DFG + + G ++P
Sbjct: 158 QALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP 217
Query: 298 --VRWMAPESLKDGVFTSHSDVWSYGVVLWEM 327
MAPE + + D+WS ++ M
Sbjct: 218 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHM 249
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 97/207 (46%), Gaps = 26/207 (12%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFL--NEA---SVMKAFDTH 182
+G G FG VY D + A+K ++ + ++ E L NE S++ D
Sbjct: 197 IGRGGFGEVYGCRKADTGKMY----AMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCP 252
Query: 183 HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVA 242
+V + + I++LM GGDL +L +E D+ AAE+
Sbjct: 253 FIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF----------YAAEII 302
Query: 243 DGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRK-GSRGFLPVRWM 301
G+ ++ ++ V+RDL N ++ + V++ D G+ D + + + G+ G +M
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHG-----YM 357
Query: 302 APESLKDGV-FTSHSDVWSYGVVLWEM 327
APE L+ GV + S +D +S G +L+++
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKL 384
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 97/207 (46%), Gaps = 26/207 (12%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFL--NEA---SVMKAFDTH 182
+G G FG VY D + A+K ++ + ++ E L NE S++ D
Sbjct: 197 IGRGGFGEVYGCRKADTGKMY----AMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCP 252
Query: 183 HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVA 242
+V + + I++LM GGDL +L +E D+ AAE+
Sbjct: 253 FIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF----------YAAEII 302
Query: 243 DGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRK-GSRGFLPVRWM 301
G+ ++ ++ V+RDL N ++ + V++ D G+ D + + + G+ G +M
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHG-----YM 357
Query: 302 APESLKDGV-FTSHSDVWSYGVVLWEM 327
APE L+ GV + S +D +S G +L+++
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKL 384
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 96/226 (42%), Gaps = 30/226 (13%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLV------YRGLIKDFRSLAEHPCAIKVANENASERE 165
K WEV + L +G+G++G V GL + L+ +I A E
Sbjct: 15 KTIWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 73
Query: 166 KAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVE 225
+ + +V+ D + + E N ++ LMG DL N ++ C+ + V+
Sbjct: 74 LLKHMKHENVIGLLDVFTPAR---SLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHVQ 128
Query: 226 RSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
+ ++ G+ Y+ +HRDL N V +D +K+ DFG+ R
Sbjct: 129 F----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----- 173
Query: 286 EYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLT 218
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 89/212 (41%), Gaps = 40/212 (18%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG GSFG V+R ++D ++ + CA+K E E + +V L
Sbjct: 82 LGRGSFGEVHR--MEDKQTGFQ--CAVKKVRLEVFRAE------ELMACAGLTSPRIVPL 131
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLR--SCRPDAETDVERSPPTLSRILQMAAEVADGM 245
YG V EG + MEL+ GG L ++ C P+ R L + +G+
Sbjct: 132 YGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPE------------DRALYYLGQALEGL 179
Query: 246 AYLADKKFVHRDLAARNCMVADDLT-VKVGDF---------GMTRDIYETEYYRKGSRGF 295
YL ++ +H D+ A N +++ D + + DF G+ +D+ +Y G+
Sbjct: 180 EYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYI-PGTETH 238
Query: 296 LPVRWMAPESLKDGVFTSHSDVWSYGVVLWEM 327
MAPE + + DVWS ++ M
Sbjct: 239 -----MAPEVVLGRSCDAKVDVWSSCCMMLHM 265
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 122 VTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDT 181
+T +G GSFG V+R +KD ++ + CA+K R + + E +
Sbjct: 76 MTHQPRVGRGSFGEVHR--MKDKQTGFQ--CAVKKV------RLEVFRVEELVACAGLSS 125
Query: 182 HHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRS--CRPDAETDVERSPPTLSRILQMAA 239
+V LYG V EG + MEL+ GG L ++ C P+ R L
Sbjct: 126 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPE------------DRALYYLG 173
Query: 240 EVADGMAYLADKKFVHRDLAARNCMVADDLT-VKVGDFGMTRDIYETEYYRKGSRG-FLP 297
+ +G+ YL ++ +H D+ A N +++ D + + DFG + + G ++P
Sbjct: 174 QALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP 233
Query: 298 --VRWMAPESLKDGVFTSHSDVWSYGVVLWEM 327
MAPE + + D+WS ++ M
Sbjct: 234 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHM 265
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 98/231 (42%), Gaps = 47/231 (20%)
Query: 122 VTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDT 181
+T+L+ +G G +G V+RG S A+K+ S R++ + E +
Sbjct: 10 ITLLECVGKGRYGEVWRG------SWQGENVAVKIF----SSRDEKSWFRETELYNTVML 59
Query: 182 HHVVKLYGVVSE------GNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRIL 235
H L + S+ +I G L +YL+ D + L
Sbjct: 60 RHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVS-----------CL 108
Query: 236 QMAAEVADGMAYLADKKF--------VHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY 287
++ +A G+A+L + F HRDL ++N +V + + D G+ + ++
Sbjct: 109 RIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA--VMHSQS 166
Query: 288 YRKGSRGFLP----VRWMAPESLKDGV----FTSHS--DVWSYGVVLWEMA 328
+ G P R+MAPE L + + F S+ D+W++G+VLWE+A
Sbjct: 167 TNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA 217
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 97/207 (46%), Gaps = 26/207 (12%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFL--NEA---SVMKAFDTH 182
+G G FG VY D + A+K ++ + ++ E L NE S++ D
Sbjct: 196 IGRGGFGEVYGCRKADTGKMY----AMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCP 251
Query: 183 HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVA 242
+V + + I++LM GGDL +L +E D+ AAE+
Sbjct: 252 FIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF----------YAAEII 301
Query: 243 DGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRK-GSRGFLPVRWM 301
G+ ++ ++ V+RDL N ++ + V++ D G+ D + + + G+ G +M
Sbjct: 302 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHG-----YM 356
Query: 302 APESLKDGV-FTSHSDVWSYGVVLWEM 327
APE L+ GV + S +D +S G +L+++
Sbjct: 357 APEVLQKGVAYDSSADWFSLGCMLFKL 383
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 97/207 (46%), Gaps = 26/207 (12%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFL--NEA---SVMKAFDTH 182
+G G FG VY D + A+K ++ + ++ E L NE S++ D
Sbjct: 197 IGRGGFGEVYGCRKADTGKMY----AMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCP 252
Query: 183 HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVA 242
+V + + I++LM GGDL +L +E D+ AAE+
Sbjct: 253 FIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF----------YAAEII 302
Query: 243 DGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRK-GSRGFLPVRWM 301
G+ ++ ++ V+RDL N ++ + V++ D G+ D + + + G+ G +M
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHG-----YM 357
Query: 302 APESLKDGV-FTSHSDVWSYGVVLWEM 327
APE L+ GV + S +D +S G +L+++
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKL 384
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 98/222 (44%), Gaps = 18/222 (8%)
Query: 114 SWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAE-HPCAIKVANENASEREKAEFLNE 172
++EV + + ELG G++G+V + R + A+K + +E+ L +
Sbjct: 45 NFEVKADDLEPIMELGRGAYGVVEK-----MRHVPSGQIMAVKRIRATVNSQEQKRLLMD 99
Query: 173 ASV-MKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
+ M+ D V YG + + MELM L + + +T E L
Sbjct: 100 LDISMRTVDCPFTVTFYGALFREGDVWICMELMDTS-LDKFYKQVIDKGQTIPED---IL 155
Query: 232 SRILQMAAEVADGMAYLADK-KFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET--EYY 288
+I A + + +L K +HRD+ N ++ VK+ DFG++ + ++ +
Sbjct: 156 GKI---AVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTI 212
Query: 289 RKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATL 330
G + ++ + PE + G ++ SD+WS G+ + E+A L
Sbjct: 213 DAGCKPYMAPERINPELNQKG-YSVKSDIWSLGITMIELAIL 253
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 95/221 (42%), Gaps = 49/221 (22%)
Query: 125 LDELGNGSFGLV---YRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDT 181
L +G+G+ G+V Y +++ R++A + N+ ++R E + +MK +
Sbjct: 29 LKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELV----LMKVVNH 82
Query: 182 HHVVKLYGVVS------EGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRIL 235
+++ L V + E ++MELM +L ++ E D ER L ++L
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLSQVIQ-----MELDHERMSYLLYQML 136
Query: 236 QMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRD---------IYETE 286
G+ +L +HRDL N +V D T+K+ DFG+ R T
Sbjct: 137 V-------GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTR 189
Query: 287 YYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEM 327
YYR APE + + + D+WS G ++ EM
Sbjct: 190 YYR------------APEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 99/233 (42%), Gaps = 49/233 (21%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLV---YRGLIKDFRSLAEHPCAIKVANENASEREKAEF 169
DS + + L +G+G+ G+V Y +++ R++A + N+ ++R E
Sbjct: 17 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYREL 74
Query: 170 LNEASVMKAFDTHHVVKLYGVVS------EGNPTLVIMELMGGGDLKNYLRSCRPDAETD 223
+ +MK + +++ L V + E ++MELM +L ++ E D
Sbjct: 75 V----LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLSQVIQ-----MELD 124
Query: 224 VERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRD-- 281
ER L ++L G+ +L +HRDL N +V D T+K+ DFG+ R
Sbjct: 125 HERMSYLLYQMLC-------GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177
Query: 282 -------IYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEM 327
T YYR APE + + + D+WS G ++ EM
Sbjct: 178 TSFMMTPYVVTRYYR------------APEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 96/226 (42%), Gaps = 30/226 (13%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLV------YRGLIKDFRSLAEHPCAIKVANENASERE 165
K WEV + L +G+G++G V GL + L+ +I A E
Sbjct: 44 KTIWEV-PERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELR 102
Query: 166 KAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVE 225
+ + +V+ D V + E N ++ LMG DL N ++ C+ + V+
Sbjct: 103 LLKHMKHENVIGLLD---VFTPATSLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHVQ 157
Query: 226 RSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
+ ++ G+ Y+ +HRDL N V +D +K+ DFG+ R
Sbjct: 158 F----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----- 202
Query: 286 EYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 203 -HTDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLT 247
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 98/234 (41%), Gaps = 49/234 (20%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLV---YRGLIKDFRSLAEHPCAIKVANENASEREKAEF 169
DS + + L +G+G+ G+V Y ++ R++A + N+ ++R E
Sbjct: 10 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYREL 67
Query: 170 LNEASVMKAFDTHHVVKLYGVVS------EGNPTLVIMELMGGGDLKNYLRSCRPDAETD 223
+ +MK + +++ L V + E ++MELM +L ++ E D
Sbjct: 68 V----LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLXQVIQ-----MELD 117
Query: 224 VERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRD-- 281
ER L ++L G+ +L +HRDL N +V D T+K+ DFG+ R
Sbjct: 118 HERMSYLLYQMLX-------GIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAG 170
Query: 282 -------IYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMA 328
T YYR APE + + + D+WS G ++ EM
Sbjct: 171 TSFMMTPYVVTRYYR------------APEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 94/226 (41%), Gaps = 34/226 (15%)
Query: 120 SKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAF 179
SK L ++G G+FG V++ R + KV EN E L E +++
Sbjct: 18 SKYEKLAKIGQGTFGEVFKA---RHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL 74
Query: 180 DTHHVVKLYGVV---------SEGNPTLVI--MELMGGGDLKNYLRSCRPDAETDVERSP 228
+VV L + +G+ LV E G L N L V+ +
Sbjct: 75 KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL----------VKFTL 124
Query: 229 PTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI---YET 285
+ R++QM + +G+ Y+ K +HRD+ A N ++ D +K+ DFG+ R +
Sbjct: 125 SEIKRVMQM---LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS 181
Query: 286 EYYRKGSRGFLPVRWMAPESLKDGV--FTSHSDVWSYGVVLWEMAT 329
+ R +R + W P L G + D+W G ++ EM T
Sbjct: 182 QPNRYXNR--VVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 104/247 (42%), Gaps = 58/247 (23%)
Query: 106 DDKLYKKDSWEVLRSKVTILDE------LGNGSFGLV---YRGLIKDFRSLAEHPCAIKV 156
D++ Y S EV S T+L +G+G+ G+V Y ++ R++A +
Sbjct: 7 DNQFY---SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLD--RNVAIKKLSRPF 61
Query: 157 ANENASEREKAEFLNEASVMKAFDTHHVVKLYGVVS------EGNPTLVIMELMGGGDLK 210
N+ ++R E + +MK + +++ L V + E ++MELM +L
Sbjct: 62 QNQTHAKRAYRELV----LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLX 116
Query: 211 NYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLT 270
++ E D ER L ++L G+ +L +HRDL N +V D T
Sbjct: 117 QVIQ-----MELDHERMSYLLYQMLX-------GIKHLHSAGIIHRDLKPSNIVVKSDXT 164
Query: 271 VKVGDFGMTRD---------IYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYG 321
+K+ DFG+ R T YYR APE + + + D+WS G
Sbjct: 165 LKILDFGLARTAGTSFMMTPYVVTRYYR------------APEVILGMGYKENVDIWSVG 212
Query: 322 VVLWEMA 328
++ EM
Sbjct: 213 CIMGEMV 219
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 104/247 (42%), Gaps = 58/247 (23%)
Query: 106 DDKLYKKDSWEVLRSKVTILDE------LGNGSFGLV---YRGLIKDFRSLAEHPCAIKV 156
D++ Y S EV S T+L +G+G+ G+V Y ++ R++A +
Sbjct: 7 DNQFY---SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLD--RNVAIKKLSRPF 61
Query: 157 ANENASEREKAEFLNEASVMKAFDTHHVVKLYGVVS------EGNPTLVIMELMGGGDLK 210
N+ ++R E + +MK + +++ L V + E ++MELM +L
Sbjct: 62 QNQTHAKRAYRELV----LMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLX 116
Query: 211 NYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLT 270
++ E D ER L ++L G+ +L +HRDL N +V D T
Sbjct: 117 QVIQ-----MELDHERMSYLLYQMLX-------GIKHLHSAGIIHRDLKPSNIVVKSDXT 164
Query: 271 VKVGDFGMTRD---------IYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYG 321
+K+ DFG+ R T YYR APE + + + D+WS G
Sbjct: 165 LKILDFGLARTAGTSFMMTPYVVTRYYR------------APEVILGMGYKENVDIWSVG 212
Query: 322 VVLWEMA 328
++ EM
Sbjct: 213 CIMGEMV 219
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 95/221 (42%), Gaps = 49/221 (22%)
Query: 125 LDELGNGSFGLV---YRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDT 181
L +G+G+ G+V Y +++ R++A + N+ ++R E + +MK +
Sbjct: 29 LKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELV----LMKCVNH 82
Query: 182 HHVVKLYGVVS------EGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRIL 235
+++ L V + E ++MELM +L ++ E D ER L ++L
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLSQVIQ-----MELDHERMSYLLYQML 136
Query: 236 QMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRD---------IYETE 286
G+ +L +HRDL N +V D T+K+ DFG+ R T
Sbjct: 137 C-------GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTR 189
Query: 287 YYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEM 327
YYR APE + + + D+WS G ++ EM
Sbjct: 190 YYR------------APEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 96/226 (42%), Gaps = 30/226 (13%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLV------YRGLIKDFRSLAEHPCAIKVANENASERE 165
K WEV + L +G+G++G V GL + L+ +I A E
Sbjct: 20 KTIWEV-PERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 78
Query: 166 KAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVE 225
+ + +V+ D V + E N ++ LMG DL N ++ C+ + V+
Sbjct: 79 LLKHMKHENVIGLLD---VFTPARSLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHVQ 133
Query: 226 RSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
+ ++ G+ Y+ +HRDL N V +D +K+ DFG+ R
Sbjct: 134 F----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR----- 178
Query: 286 EYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 179 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 96/222 (43%), Gaps = 26/222 (11%)
Query: 120 SKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAF 179
SK L ++G G+FG V++ R + KV EN E L E +++
Sbjct: 18 SKYEKLAKIGQGTFGEVFKA---RHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL 74
Query: 180 DTHHVVKLYGVV-SEGNP------TLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLS 232
+VV L + ++ +P ++ ++ DL L + V+ + +
Sbjct: 75 KHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLL------SNVLVKFTLSEIK 128
Query: 233 RILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI---YETEYYR 289
R++QM + +G+ Y+ K +HRD+ A N ++ D +K+ DFG+ R ++ R
Sbjct: 129 RVMQM---LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR 185
Query: 290 KGSRGFLPVRWMAPESLKDGV--FTSHSDVWSYGVVLWEMAT 329
+R + W P L G + D+W G ++ EM T
Sbjct: 186 YXNR--VVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 95/221 (42%), Gaps = 49/221 (22%)
Query: 125 LDELGNGSFGLV---YRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDT 181
L +G+G+ G+V Y +++ R++A + N+ ++R E + +MK +
Sbjct: 29 LKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELV----LMKVVNH 82
Query: 182 HHVVKLYGVVS------EGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRIL 235
+++ L V + E ++MELM +L ++ E D ER L ++L
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLSQVIQ-----MELDHERMSYLLYQML 136
Query: 236 QMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRD---------IYETE 286
G+ +L +HRDL N +V D T+K+ DFG+ R T
Sbjct: 137 C-------GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTR 189
Query: 287 YYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEM 327
YYR APE + + + D+WS G ++ EM
Sbjct: 190 YYR------------APEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 99/233 (42%), Gaps = 49/233 (21%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLV---YRGLIKDFRSLAEHPCAIKVANENASEREKAEF 169
DS + + L +G+G+ G+V Y +++ R++A + N+ ++R E
Sbjct: 19 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYREL 76
Query: 170 LNEASVMKAFDTHHVVKLYGVVS------EGNPTLVIMELMGGGDLKNYLRSCRPDAETD 223
+ +MK + +++ L V + E ++MELM +L ++ E D
Sbjct: 77 V----LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQ-----MELD 126
Query: 224 VERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRD-- 281
ER L ++L G+ +L +HRDL N +V D T+K+ DFG+ R
Sbjct: 127 HERMSYLLYQMLC-------GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 179
Query: 282 -------IYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEM 327
T YYR APE + + + D+WS G ++ EM
Sbjct: 180 TSFMMVPFVVTRYYR------------APEVILGMGYKENVDIWSVGCIMGEM 220
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 94/226 (41%), Gaps = 34/226 (15%)
Query: 120 SKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAF 179
SK L ++G G+FG V++ R + KV EN E L E +++
Sbjct: 17 SKYEKLAKIGQGTFGEVFKA---RHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL 73
Query: 180 DTHHVVKLYGVVS---------EGNPTLVI--MELMGGGDLKNYLRSCRPDAETDVERSP 228
+VV L + +G+ LV E G L N L V+ +
Sbjct: 74 KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL----------VKFTL 123
Query: 229 PTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI---YET 285
+ R++QM + +G+ Y+ K +HRD+ A N ++ D +K+ DFG+ R +
Sbjct: 124 SEIKRVMQM---LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS 180
Query: 286 EYYRKGSRGFLPVRWMAPESLKDGV--FTSHSDVWSYGVVLWEMAT 329
+ R +R + W P L G + D+W G ++ EM T
Sbjct: 181 QPNRYXNR--VVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 224
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 97/226 (42%), Gaps = 30/226 (13%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLV------YRGLIKDFRSLAEHPCAIKVANENASERE 165
K WEV + L +G+G++G V GL + L++ +I A E
Sbjct: 27 KTIWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELR 85
Query: 166 KAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVE 225
+ + +V+ D + + E N ++ LMG DL N ++ C+ + V+
Sbjct: 86 LLKHMKHENVIGLLDVFTPAR---SLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHVQ 140
Query: 226 RSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
+ ++ G+ Y+ +HRDL N V +D +K+ DFG+ R
Sbjct: 141 F----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----- 185
Query: 286 EYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 186 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 230
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 85/185 (45%), Gaps = 32/185 (17%)
Query: 153 AIKVANENASEREKAEFLNEASVMKAFDTH-HVVKLYGVVSEGNPTLVIMELMGGGDLKN 211
A+KV ++ S+R+ +E E ++ + H +++ L V +G ++ ELM GG+L +
Sbjct: 56 AVKVIDK--SKRDPSE---EIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLD 110
Query: 212 YLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDL-- 269
+ + +E + T+ + ++ YL + VHRDL N + D+
Sbjct: 111 KILRQKFFSEREASFVLHTIGKTVE----------YLHSQGVVHRDLKPSNILYVDESGN 160
Query: 270 --TVKVGDFGMTRDIYETEYYRKGSRGFL-----PVRWMAPESLKDGVFTSHSDVWSYGV 322
+++ DFG + + + G L ++APE LK + D+WS G+
Sbjct: 161 PECLRICDFGFAKQL-------RAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGI 213
Query: 323 VLWEM 327
+L+ M
Sbjct: 214 LLYTM 218
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 100/240 (41%), Gaps = 28/240 (11%)
Query: 114 SWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAE-HPCAIKVANENASEREKAEFLNE 172
S EV + + ELG G++G+V + R + A+K + +E+ L +
Sbjct: 1 SMEVKADDLEPIMELGRGAYGVVEK-----MRHVPSGQIMAVKRIRATVNSQEQKRLLMD 55
Query: 173 ASV-MKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
+ M+ D V YG + + MELM L + + +T E L
Sbjct: 56 LDISMRTVDCPFTVTFYGALFREGDVWICMELMDTS-LDKFYKQVIDKGQTIPED---IL 111
Query: 232 SRILQMAAEVADGMAYLADK-KFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRK 290
+I A + + +L K +HRD+ N ++ VK+ DFG++ + + + +
Sbjct: 112 GKI---AVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVD-DVAKD 167
Query: 291 GSRGFLPVRWMAPE----SLKDGVFTSHSDVWSYGVVLWEMATLA------SQPYQGLSN 340
G P +MAPE L ++ SD+WS G+ + E+A L P+Q L
Sbjct: 168 IDAGCKP--YMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQ 225
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 96/226 (42%), Gaps = 30/226 (13%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLV------YRGLIKDFRSLAEHPCAIKVANENASERE 165
K WEV + L +G+G++G V GL + L+ +I A E
Sbjct: 11 KTIWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 69
Query: 166 KAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVE 225
+ + +V+ D + + E N ++ LMG DL N ++ C+ + V+
Sbjct: 70 LLKHMKHENVIGLLDVFTPAR---SLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHVQ 124
Query: 226 RSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
+ ++ G+ Y+ +HRDL N V +D +K+ DFG+ R
Sbjct: 125 F----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----- 169
Query: 286 EYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 170 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 96/226 (42%), Gaps = 30/226 (13%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLV------YRGLIKDFRSLAEHPCAIKVANENASERE 165
K WEV + L +G+G++G V GL + L+ +I A E
Sbjct: 13 KTIWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 71
Query: 166 KAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVE 225
+ + +V+ D + + E N ++ LMG DL N ++ C+ + V+
Sbjct: 72 LLKHMKHENVIGLLDVFTPAR---SLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHVQ 126
Query: 226 RSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
+ ++ G+ Y+ +HRDL N V +D +K+ DFG+ R
Sbjct: 127 F----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----- 171
Query: 286 EYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 172 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 216
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 96/226 (42%), Gaps = 30/226 (13%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLV------YRGLIKDFRSLAEHPCAIKVANENASERE 165
K WEV + L +G+G++G V GL + L+ +I A E
Sbjct: 15 KTIWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 73
Query: 166 KAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVE 225
+ + +V+ D + + E N ++ LMG DL N ++ C+ + V+
Sbjct: 74 LLKHMKHENVIGLLDVFTPAR---SLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHVQ 128
Query: 226 RSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
+ ++ G+ Y+ +HRDL N V +D +K+ DFG+ R
Sbjct: 129 F----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----- 173
Query: 286 EYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 94/226 (41%), Gaps = 34/226 (15%)
Query: 120 SKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAF 179
SK L ++G G+FG V++ R + KV EN E L E +++
Sbjct: 18 SKYEKLAKIGQGTFGEVFKA---RHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL 74
Query: 180 DTHHVVKLYGVVS---------EGNPTLVI--MELMGGGDLKNYLRSCRPDAETDVERSP 228
+VV L + +G+ LV E G L N L V+ +
Sbjct: 75 KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL----------VKFTL 124
Query: 229 PTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI---YET 285
+ R++QM + +G+ Y+ K +HRD+ A N ++ D +K+ DFG+ R +
Sbjct: 125 SEIKRVMQM---LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS 181
Query: 286 EYYRKGSRGFLPVRWMAPESLKDGV--FTSHSDVWSYGVVLWEMAT 329
+ R +R + W P L G + D+W G ++ EM T
Sbjct: 182 QPNRYXNR--VVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 96/226 (42%), Gaps = 30/226 (13%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLV------YRGLIKDFRSLAEHPCAIKVANENASERE 165
K WEV + L +G+G++G V GL + L+ +I A E
Sbjct: 12 KTIWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 70
Query: 166 KAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVE 225
+ + +V+ D + + E N ++ LMG DL N ++ C+ + V+
Sbjct: 71 LLKHMKHENVIGLLDVFTPAR---SLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHVQ 125
Query: 226 RSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
+ ++ G+ Y+ +HRDL N V +D +K+ DFG+ R
Sbjct: 126 F----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----- 170
Query: 286 EYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 171 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 215
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 96/226 (42%), Gaps = 30/226 (13%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLV------YRGLIKDFRSLAEHPCAIKVANENASERE 165
K WEV + L +G+G++G V GL + L+ +I A E
Sbjct: 22 KTIWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 80
Query: 166 KAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVE 225
+ + +V+ D V + E N ++ LMG DL N ++ C+ + V+
Sbjct: 81 LLKHMKHENVIGLLD---VFTPARSLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHVQ 135
Query: 226 RSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
+ ++ G+ Y+ +HRDL N V +D +K+ DFG+ R +
Sbjct: 136 F----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE 185
Query: 286 EYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 186 ------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 91/222 (40%), Gaps = 50/222 (22%)
Query: 122 VTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDT 181
V I+D G GSF A E RE L E +++
Sbjct: 34 VKIIDVTGGGSFS----------------------AEEVQELREAT--LKEVDILRKVSG 69
Query: 182 H-HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAE 240
H ++++L ++ +LM G+L +YL V S +I++ E
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE-------KVTLSEKETRKIMRALLE 122
Query: 241 VADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRK--GSRGFLPV 298
V + L VHRDL N ++ DD+ +K+ DFG + + E R+ G+ +L
Sbjct: 123 VICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYL-- 177
Query: 299 RWMAPESLKDGVFTSHS------DVWSYGVVLWEMATLASQP 334
APE ++ + +H D+WS GV+++ + LA P
Sbjct: 178 ---APEIIECSMNDNHPGYGKEVDMWSTGVIMYTL--LAGSP 214
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 96/226 (42%), Gaps = 30/226 (13%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLV------YRGLIKDFRSLAEHPCAIKVANENASERE 165
K WEV + L +G+G++G V GL + L+ +I A E
Sbjct: 12 KTIWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 70
Query: 166 KAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVE 225
+ + +V+ D + + E N ++ LMG DL N ++ C+ + V+
Sbjct: 71 LLKHMKHENVIGLLDVFTPAR---SLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHVQ 125
Query: 226 RSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
+ ++ G+ Y+ +HRDL N V +D +K+ DFG+ R
Sbjct: 126 F----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----- 170
Query: 286 EYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 171 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 215
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 96/226 (42%), Gaps = 30/226 (13%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLV------YRGLIKDFRSLAEHPCAIKVANENASERE 165
K WEV + L +G+G++G V GL + L+ +I A E
Sbjct: 21 KTIWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 79
Query: 166 KAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVE 225
+ + +V+ D V + E N ++ LMG DL N ++ C+ + V+
Sbjct: 80 LLKHMKHENVIGLLD---VFTPARSLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHVQ 134
Query: 226 RSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
+ ++ G+ Y+ +HRDL N V +D +K+ DFG+ R
Sbjct: 135 F----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----- 179
Query: 286 EYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 180 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 96/226 (42%), Gaps = 30/226 (13%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLV------YRGLIKDFRSLAEHPCAIKVANENASERE 165
K WEV + L +G+G++G V GL + L+ +I A E
Sbjct: 20 KTIWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 78
Query: 166 KAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVE 225
+ + +V+ D V + E N ++ LMG DL N ++ C+ + V+
Sbjct: 79 LLKHMKHENVIGLLD---VFTPARSLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHVQ 133
Query: 226 RSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
+ ++ G+ Y+ +HRDL N V +D +K+ DFG+ R
Sbjct: 134 F----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----- 178
Query: 286 EYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 179 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 98/234 (41%), Gaps = 49/234 (20%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVAN---ENASEREKAEF 169
DS + + L +G+G+ G+V + ++ E AIK + +N + ++A
Sbjct: 17 DSTFTVLKRYQNLKPIGSGAQGIVCAA----YDAILERNVAIKKLSRPFQNQTHAKRA-- 70
Query: 170 LNEASVMKAFDTHHVVKLYGVVS------EGNPTLVIMELMGGGDLKNYLRSCRPDAETD 223
E +MK + +++ L V + E ++MELM +L ++ E D
Sbjct: 71 YRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQ-----MELD 124
Query: 224 VERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI- 282
ER L ++L G+ +L +HRDL N +V D T+K+ DFG+ R
Sbjct: 125 HERMSYLLYQMLC-------GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177
Query: 283 --------YETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMA 328
T YYR APE + + + D+WS G ++ EM
Sbjct: 178 TSFMMEPEVVTRYYR------------APEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 96/226 (42%), Gaps = 30/226 (13%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLV------YRGLIKDFRSLAEHPCAIKVANENASERE 165
K WEV + L +G+G++G V GL + L+ +I A E
Sbjct: 38 KTIWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 96
Query: 166 KAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVE 225
+ + +V+ D + + E N ++ LMG DL N ++ C+ + V+
Sbjct: 97 LLKHMKHENVIGLLDVFTPAR---SLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHVQ 151
Query: 226 RSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
+ ++ G+ Y+ +HRDL N V +D +K+ DFG+ R
Sbjct: 152 F----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----- 196
Query: 286 EYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 197 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 241
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 96/226 (42%), Gaps = 30/226 (13%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLV------YRGLIKDFRSLAEHPCAIKVANENASERE 165
K WEV + L +G+G++G V GL + L+ +I A E
Sbjct: 22 KTIWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 80
Query: 166 KAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVE 225
+ + +V+ D V + E N ++ LMG DL N ++ C+ + V+
Sbjct: 81 LLKHMKHENVIGLLD---VFTPARSLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHVQ 135
Query: 226 RSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
+ ++ G+ Y+ +HRDL N V +D +K+ DFG+ R +
Sbjct: 136 F----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE 185
Query: 286 EYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 186 ------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 99/233 (42%), Gaps = 49/233 (21%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLV---YRGLIKDFRSLAEHPCAIKVANENASEREKAEF 169
DS + + L +G+G+ G+V Y +++ R++A + N+ ++R E
Sbjct: 17 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYREL 74
Query: 170 LNEASVMKAFDTHHVVKLYGVVS------EGNPTLVIMELMGGGDLKNYLRSCRPDAETD 223
+ +MK + +++ L V + E ++MELM +L ++ E D
Sbjct: 75 V----LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQ-----MELD 124
Query: 224 VERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI- 282
ER L ++L G+ +L +HRDL N +V D T+K+ DFG+ R
Sbjct: 125 HERMSYLLYQMLC-------GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177
Query: 283 --------YETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEM 327
T YYR APE + + + D+WS G ++ EM
Sbjct: 178 TSFMMTPEVVTRYYR------------APEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 96/226 (42%), Gaps = 30/226 (13%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLV------YRGLIKDFRSLAEHPCAIKVANENASERE 165
K WEV + L +G+G++G V GL + L+ +I A E
Sbjct: 20 KTIWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 78
Query: 166 KAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVE 225
+ + +V+ D V + E N ++ LMG DL N ++ C+ + V+
Sbjct: 79 LLKHMKHENVIGLLD---VFTPARSLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHVQ 133
Query: 226 RSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
+ ++ G+ Y+ +HRDL N V +D +K+ DFG+ R
Sbjct: 134 F----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR----- 178
Query: 286 EYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 179 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 96/226 (42%), Gaps = 30/226 (13%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLV------YRGLIKDFRSLAEHPCAIKVANENASERE 165
K WEV + L +G+G++G V GL + L+ +I A E
Sbjct: 21 KTIWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 79
Query: 166 KAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVE 225
+ + +V+ D V + E N ++ LMG DL N ++ C+ + V+
Sbjct: 80 LLKHMKHENVIGLLD---VFTPARSLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHVQ 134
Query: 226 RSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
+ ++ G+ Y+ +HRDL N V +D +K+ DFG+ R
Sbjct: 135 F----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----- 179
Query: 286 EYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 180 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 96/226 (42%), Gaps = 30/226 (13%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLV------YRGLIKDFRSLAEHPCAIKVANENASERE 165
K WEV + L +G+G++G V GL + L+ +I A E
Sbjct: 34 KTIWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 92
Query: 166 KAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVE 225
+ + +V+ D + + E N ++ LMG DL N ++ C+ + V+
Sbjct: 93 LLKHMKHENVIGLLDVFTPAR---SLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHVQ 147
Query: 226 RSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
+ ++ G+ Y+ +HRDL N V +D +K+ DFG+ R
Sbjct: 148 F----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----- 192
Query: 286 EYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 193 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 237
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 96/226 (42%), Gaps = 30/226 (13%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLV------YRGLIKDFRSLAEHPCAIKVANENASERE 165
K WEV + L +G+G++G V GL + L+ +I A E
Sbjct: 26 KTIWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 84
Query: 166 KAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVE 225
+ + +V+ D + + E N ++ LMG DL N ++ C+ + V+
Sbjct: 85 LLKHMKHENVIGLLDVFTPAR---SLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHVQ 139
Query: 226 RSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
+ ++ G+ Y+ +HRDL N V +D +K+ DFG+ R
Sbjct: 140 F----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR----- 184
Query: 286 EYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 185 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 229
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 96/226 (42%), Gaps = 30/226 (13%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLV------YRGLIKDFRSLAEHPCAIKVANENASERE 165
K WEV + L +G+G++G V GL + L+ +I A E
Sbjct: 15 KTIWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 73
Query: 166 KAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVE 225
+ + +V+ D V + E N ++ LMG DL N ++ C+ + V+
Sbjct: 74 LLKHMKHENVIGLLD---VFTPARSLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHVQ 128
Query: 226 RSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
+ ++ G+ Y+ +HRDL N V +D +K+ DFG+ R
Sbjct: 129 F----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----- 173
Query: 286 EYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 96/226 (42%), Gaps = 30/226 (13%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLV------YRGLIKDFRSLAEHPCAIKVANENASERE 165
K WEV + L +G+G++G V GL + L+ +I A E
Sbjct: 35 KTIWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 93
Query: 166 KAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVE 225
+ + +V+ D + + E N ++ LMG DL N ++ C+ + V+
Sbjct: 94 LLKHMKHENVIGLLDVFTPAR---SLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHVQ 148
Query: 226 RSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
+ ++ G+ Y+ +HRDL N V +D +K+ DFG+ R
Sbjct: 149 F----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----- 193
Query: 286 EYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 194 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 238
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 96/226 (42%), Gaps = 30/226 (13%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLV------YRGLIKDFRSLAEHPCAIKVANENASERE 165
K WEV + L +G+G++G V GL + L+ +I A E
Sbjct: 22 KTIWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 80
Query: 166 KAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVE 225
+ + +V+ D V + E N ++ LMG DL N ++ C+ + V+
Sbjct: 81 LLKHMKHENVIGLLD---VFTPARSLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHVQ 135
Query: 226 RSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
+ ++ G+ Y+ +HRDL N V +D +K+ DFG+ R +
Sbjct: 136 F----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE 185
Query: 286 EYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 186 ------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 96/226 (42%), Gaps = 30/226 (13%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLV------YRGLIKDFRSLAEHPCAIKVANENASERE 165
K WEV + L +G+G++G V GL + L+ +I A E
Sbjct: 15 KTIWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 73
Query: 166 KAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVE 225
+ + +V+ D V + E N ++ LMG DL N ++ C+ + V+
Sbjct: 74 LLKHMKHENVIGLLD---VFTPARSLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHVQ 128
Query: 226 RSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
+ ++ G+ Y+ +HRDL N V +D +K+ DFG+ R
Sbjct: 129 F----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----- 173
Query: 286 EYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 87/206 (42%), Gaps = 28/206 (13%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG GSFG V+R ++D ++ + CA+K E E + +V L
Sbjct: 101 LGRGSFGEVHR--MEDKQTGFQ--CAVKKVRLEVFRAE------ELMACAGLTSPRIVPL 150
Query: 188 YGVVSEGNPTLVIMELMGGGDLKNYLR--SCRPDAETDVERSPPTLSRILQMAAEVADGM 245
YG V EG + MEL+ GG L ++ C P+ R L + +G+
Sbjct: 151 YGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPE------------DRALYYLGQALEGL 198
Query: 246 AYLADKKFVHRDLAARNCMVADDLT-VKVGDFGMTRDIYETEYYRKGSRG-FLP--VRWM 301
YL ++ +H D+ A N +++ D + + DFG + + G ++P M
Sbjct: 199 EYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHM 258
Query: 302 APESLKDGVFTSHSDVWSYGVVLWEM 327
APE + + DVWS ++ M
Sbjct: 259 APEVVLGRSCDAKVDVWSSCCMMLHM 284
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 93/191 (48%), Gaps = 27/191 (14%)
Query: 162 SEREKAEFLNEASVMKAFDTHHVVKLYGVVSEG---NPTLVIMELMGGGDLKNYLRSCRP 218
S R+ +F E ++ F +V+ + G +PTL I M G L N L
Sbjct: 47 STRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTL-ITHWMPYGSLYNVLHE--- 102
Query: 219 DAETDVERSPPTLSRILQMAAEVADGMAYLAD-KKFVHRD-LAARNCMVADDLTVKVGDF 276
V++S + ++ A ++A GMA+L + + R L +R+ M+ +D+T ++
Sbjct: 103 GTNFVVDQS-----QAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARIS-- 155
Query: 277 GMTRDIYETEY-YRKGSRGFLPVRWMAPESLK---DGVFTSHSDVWSYGVVLWEMATLAS 332
+ + ++ ++ R + P W+APE+L+ + +D+WS+ V+LWE+ T
Sbjct: 156 -----MADVKFSFQSPGRMYAPA-WVAPEALQKKPEDTNRRSADMWSFAVLLWELVT-RE 208
Query: 333 QPYQGLSNEQV 343
P+ LSN ++
Sbjct: 209 VPFADLSNMEI 219
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 98/233 (42%), Gaps = 49/233 (21%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVAN---ENASEREKAEF 169
DS + + L +G+G+ G+V + ++ E AIK + +N + ++A
Sbjct: 17 DSTFTVLKRYQNLKPIGSGAQGIVCAA----YDAILERNVAIKKLSRPFQNQTHAKRA-- 70
Query: 170 LNEASVMKAFDTHHVVKLYGVVS------EGNPTLVIMELMGGGDLKNYLRSCRPDAETD 223
E +MK + +++ L V + E ++MELM +L ++ E D
Sbjct: 71 YRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQ-----MELD 124
Query: 224 VERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRD-- 281
ER L ++L G+ +L +HRDL N +V D T+K+ DFG+ R
Sbjct: 125 HERMSYLLYQMLC-------GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177
Query: 282 -------IYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEM 327
T YYR APE + + + D+WS G ++ EM
Sbjct: 178 TSFMMTPYVVTRYYR------------APEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 96/226 (42%), Gaps = 30/226 (13%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLV------YRGLIKDFRSLAEHPCAIKVANENASERE 165
K WEV + L +G+G++G V GL + L+ +I A E
Sbjct: 17 KTIWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 75
Query: 166 KAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVE 225
+ + +V+ D + + E N ++ LMG DL N ++ C+ + V+
Sbjct: 76 LLKHMKHENVIGLLDVFTPAR---SLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHVQ 130
Query: 226 RSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
+ ++ G+ Y+ +HRDL N V +D +K+ DFG+ R
Sbjct: 131 F----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----- 175
Query: 286 EYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 176 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 96/226 (42%), Gaps = 30/226 (13%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLV------YRGLIKDFRSLAEHPCAIKVANENASERE 165
K WEV + L +G+G++G V GL + L+ +I A E
Sbjct: 17 KTIWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 75
Query: 166 KAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVE 225
+ + +V+ D V + E N ++ LMG DL N ++ C+ + V+
Sbjct: 76 LLKHMKHENVIGLLD---VFTPARSLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHVQ 130
Query: 226 RSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
+ ++ G+ Y+ +HRDL N V +D +K+ DFG+ R
Sbjct: 131 F----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----- 175
Query: 286 EYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 176 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 91/222 (40%), Gaps = 50/222 (22%)
Query: 122 VTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDT 181
V I+D G GSF A E RE L E +++
Sbjct: 47 VKIIDVTGGGSFS----------------------AEEVQELREAT--LKEVDILRKVSG 82
Query: 182 H-HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAE 240
H ++++L ++ +LM G+L +YL V S +I++ E
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE-------KVTLSEKETRKIMRALLE 135
Query: 241 VADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRK--GSRGFLPV 298
V + L VHRDL N ++ DD+ +K+ DFG + + E R+ G+ +L
Sbjct: 136 VICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYL-- 190
Query: 299 RWMAPESLKDGVFTSHS------DVWSYGVVLWEMATLASQP 334
APE ++ + +H D+WS GV+++ + LA P
Sbjct: 191 ---APEIIECSMNDNHPGYGKEVDMWSTGVIMYTL--LAGSP 227
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 96/226 (42%), Gaps = 30/226 (13%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLV------YRGLIKDFRSLAEHPCAIKVANENASERE 165
K WEV + L +G+G++G V GL + L+ +I A E
Sbjct: 15 KTIWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 73
Query: 166 KAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVE 225
+ + +V+ D V + E N ++ LMG DL N ++ C+ + V+
Sbjct: 74 LLKHMKHENVIGLLD---VFTPARSLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHVQ 128
Query: 226 RSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
+ ++ G+ Y+ +HRDL N V +D +K+ DFG+ R
Sbjct: 129 F----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----- 173
Query: 286 EYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 96/242 (39%), Gaps = 43/242 (17%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASER-EKAEFLNEASVMKAFDTHHVVK 186
+G GS+G VY K+ A AIK N + + L E +++ + ++++
Sbjct: 36 IGRGSYGYVYLAYDKN----ANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIR 91
Query: 187 LYGVVSEGN----PTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVA 242
L+ ++ + L I+ + DLK ++ E V+ + +
Sbjct: 92 LHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVK----------TILYNLL 141
Query: 243 DGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTR------DIY------------- 283
G ++ + +HRDL NC++ D +VK+ DFG+ R DI+
Sbjct: 142 LGEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEE 201
Query: 284 ---ETEYYRKGSRGFLPVRWM-APE-SLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGL 338
+ +K + RW APE L +T+ D+WS G + E+ +
Sbjct: 202 PGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNP 261
Query: 339 SN 340
+N
Sbjct: 262 TN 263
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 96/226 (42%), Gaps = 30/226 (13%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLV------YRGLIKDFRSLAEHPCAIKVANENASERE 165
K WEV + L +G+G++G V GL + L+ +I A E
Sbjct: 15 KTIWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 73
Query: 166 KAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVE 225
+ + +V+ D + + E N ++ LMG DL N ++ C+ + V+
Sbjct: 74 LLKHMKHENVIGLLDVFTPAR---SLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHVQ 128
Query: 226 RSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
+ ++ G+ Y+ +HRDL N V +D +K+ DFG+ R
Sbjct: 129 F----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----- 173
Query: 286 EYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 96/226 (42%), Gaps = 30/226 (13%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLV------YRGLIKDFRSLAEHPCAIKVANENASERE 165
K WEV + L +G+G++G V GL + L+ +I A E
Sbjct: 17 KTIWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 75
Query: 166 KAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVE 225
+ + +V+ D + + E N ++ LMG DL N ++ C+ + V+
Sbjct: 76 LLKHMKHENVIGLLDVFTPAR---SLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHVQ 130
Query: 226 RSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
+ ++ G+ Y+ +HRDL N V +D +K+ DFG+ R
Sbjct: 131 F----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----- 175
Query: 286 EYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 176 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 94/226 (41%), Gaps = 41/226 (18%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG G+FG V +K +L AIK +E + + L+E ++ + + +VV+
Sbjct: 14 LGQGAFGQV----VKARNALDSRYYAIKKIRH--TEEKLSTILSEVMLLASLNHQYVVRY 67
Query: 188 YGV-------------VSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRI 234
Y V + + + ME L + + S + + D
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRD---------EY 118
Query: 235 LQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRG 294
++ ++ + ++Y+ + +HRDL N + + VK+GDFG+ ++++ + K
Sbjct: 119 WRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 295 FLP------------VRWMAPESLK-DGVFTSHSDVWSYGVVLWEM 327
LP ++A E L G + D++S G++ +EM
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM 224
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 96/226 (42%), Gaps = 30/226 (13%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLV------YRGLIKDFRSLAEHPCAIKVANENASERE 165
K WEV + L +G+G++G V GL + L+ +I A E
Sbjct: 27 KTIWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 85
Query: 166 KAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVE 225
+ + +V+ D + + E N ++ LMG DL N ++ C+ + V+
Sbjct: 86 LLKHMKHENVIGLLDVFTPAR---SLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHVQ 140
Query: 226 RSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
+ ++ G+ Y+ +HRDL N V +D +K+ DFG+ R
Sbjct: 141 F----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----- 185
Query: 286 EYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 186 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 230
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 85/185 (45%), Gaps = 32/185 (17%)
Query: 153 AIKVANENASEREKAEFLNEASVMKAFDTH-HVVKLYGVVSEGNPTLVIMELMGGGDLKN 211
A+KV ++ S+R+ +E E ++ + H +++ L V +G ++ ELM GG+L +
Sbjct: 56 AVKVIDK--SKRDPSE---EIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLD 110
Query: 212 YLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDL-- 269
+ + +E + T+ + ++ YL + VHRDL N + D+
Sbjct: 111 KILRQKFFSEREASFVLHTIGKTVE----------YLHSQGVVHRDLKPSNILYVDESGN 160
Query: 270 --TVKVGDFGMTRDIYETEYYRKGSRGFL-----PVRWMAPESLKDGVFTSHSDVWSYGV 322
+++ DFG + + + G L ++APE LK + D+WS G+
Sbjct: 161 PECLRICDFGFAKQL-------RAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGI 213
Query: 323 VLWEM 327
+L+ M
Sbjct: 214 LLYTM 218
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 96/226 (42%), Gaps = 30/226 (13%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLV------YRGLIKDFRSLAEHPCAIKVANENASERE 165
K WEV + L +G+G++G V GL + L+ +I A E
Sbjct: 15 KTIWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 73
Query: 166 KAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVE 225
+ + +V+ D V + E N ++ LMG DL N ++ C+ + V+
Sbjct: 74 LLKHMKHENVIGLLD---VFTPARSLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHVQ 128
Query: 226 RSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
+ ++ G+ Y+ +HRDL N V +D +K+ DFG+ R
Sbjct: 129 F----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----- 173
Query: 286 EYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 96/226 (42%), Gaps = 30/226 (13%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLV------YRGLIKDFRSLAEHPCAIKVANENASERE 165
K WEV + L +G+G++G V GL + L+ +I A E
Sbjct: 22 KTIWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 80
Query: 166 KAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVE 225
+ + +V+ D V + E N ++ LMG DL N ++ C+ + V+
Sbjct: 81 LLKHMKHENVIGLLD---VFTPARSLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHVQ 135
Query: 226 RSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
+ ++ G+ Y+ +HRDL N V +D +K+ DFG+ R
Sbjct: 136 F----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----- 180
Query: 286 EYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 181 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 96/226 (42%), Gaps = 30/226 (13%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLV------YRGLIKDFRSLAEHPCAIKVANENASERE 165
K WEV + L +G+G++G V GL + L+ +I A E
Sbjct: 27 KTIWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 85
Query: 166 KAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVE 225
+ + +V+ D + + E N ++ LMG DL N ++ C+ + V+
Sbjct: 86 LLKHMKHENVIGLLDVFTPAR---SLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHVQ 140
Query: 226 RSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
+ ++ G+ Y+ +HRDL N V +D +K+ DFG+ R
Sbjct: 141 F----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----- 185
Query: 286 EYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 186 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 230
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 96/226 (42%), Gaps = 30/226 (13%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLV------YRGLIKDFRSLAEHPCAIKVANENASERE 165
K WEV + L +G+G++G V GL + L+ +I A E
Sbjct: 20 KTIWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 78
Query: 166 KAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVE 225
+ + +V+ D V + E N ++ LMG DL N ++ C+ + V+
Sbjct: 79 LLKHMKHENVIGLLD---VFTPARSLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHVQ 133
Query: 226 RSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
+ ++ G+ Y+ +HRDL N V +D +K+ DFG+ R
Sbjct: 134 F----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----- 178
Query: 286 EYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 179 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 99/233 (42%), Gaps = 49/233 (21%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLV---YRGLIKDFRSLAEHPCAIKVANENASEREKAEF 169
DS + + L +G+G+ G+V Y +++ R++A + N+ ++R E
Sbjct: 18 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYREL 75
Query: 170 LNEASVMKAFDTHHVVKLYGVVS------EGNPTLVIMELMGGGDLKNYLRSCRPDAETD 223
+ +MK + +++ L V + E ++MELM +L ++ E D
Sbjct: 76 V----LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQ-----MELD 125
Query: 224 VERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRD-- 281
ER L ++L G+ +L +HRDL N +V D T+K+ DFG+ R
Sbjct: 126 HERMSYLLYQMLC-------GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 178
Query: 282 -------IYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEM 327
T YYR APE + + + D+WS G ++ EM
Sbjct: 179 TSFMMTPYVVTRYYR------------APEVILGMGYKENVDIWSVGCIMGEM 219
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 96/226 (42%), Gaps = 30/226 (13%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLV------YRGLIKDFRSLAEHPCAIKVANENASERE 165
K WEV + L +G+G++G V GL + L+ +I A E
Sbjct: 14 KTIWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 72
Query: 166 KAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVE 225
+ + +V+ D V + E N ++ LMG DL N ++ C+ + V+
Sbjct: 73 LLKHMKHENVIGLLD---VFTPARSLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHVQ 127
Query: 226 RSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
+ ++ G+ Y+ +HRDL N V +D +K+ DFG+ R
Sbjct: 128 F----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----- 172
Query: 286 EYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 173 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 217
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 96/226 (42%), Gaps = 30/226 (13%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLV------YRGLIKDFRSLAEHPCAIKVANENASERE 165
K WEV + L +G+G++G V GL + L+ +I A E
Sbjct: 38 KTIWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 96
Query: 166 KAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVE 225
+ + +V+ D + + E N ++ LMG DL N ++ C+ + V+
Sbjct: 97 LLKHMKHENVIGLLDVFTPAR---SLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHVQ 151
Query: 226 RSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
+ ++ G+ Y+ +HRDL N V +D +K+ DFG+ R
Sbjct: 152 F----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----- 196
Query: 286 EYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 197 -HTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 241
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 96/226 (42%), Gaps = 30/226 (13%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLV------YRGLIKDFRSLAEHPCAIKVANENASERE 165
K WEV + L +G+G++G V GL + L+ +I A E
Sbjct: 15 KTIWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 73
Query: 166 KAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVE 225
+ + +V+ D V + E N ++ LMG DL N ++ C+ + V+
Sbjct: 74 LLKHMKHENVIGLLD---VFTPARSLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHVQ 128
Query: 226 RSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
+ ++ G+ Y+ +HRDL N V +D +K+ DFG+ R
Sbjct: 129 F----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----- 173
Query: 286 EYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 98/216 (45%), Gaps = 36/216 (16%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTH- 182
+ +++G GS+ + R + K A+K+ ++ S+R+ E E ++ + H
Sbjct: 26 VKEDIGVGSYSVCKRCIHK----ATNXEFAVKIIDK--SKRDPTE---EIEILLRYGQHP 76
Query: 183 HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVA 242
+++ L V +G V+ EL GG+L + + + +E + T+++ ++
Sbjct: 77 NIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVE------ 130
Query: 243 DGMAYLADKKFVHRDLAARNCMVADDL----TVKVGDFGMTRDIYETEYYRKGSRGFL-- 296
YL + VHRDL N + D+ ++++ DFG + + + G L
Sbjct: 131 ----YLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL-------RAENGLLXT 179
Query: 297 ---PVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
++APE L+ + + D+WS GV+L+ T
Sbjct: 180 PCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLT 215
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 95/226 (42%), Gaps = 30/226 (13%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLV------YRGLIKDFRSLAEHPCAIKVANENASERE 165
K WEV + L +G+G++G V GL + L+ +I A E
Sbjct: 15 KTIWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 73
Query: 166 KAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVE 225
+ + +V+ D + + E N ++ LMG DL N ++S +
Sbjct: 74 LLKHMKHENVIGLLDVFTPAR---SLEEFNDVYLVTHLMGA-DLNNIVKSQKL------- 122
Query: 226 RSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
T + + ++ G+ Y+ +HRDL N V +D +K+ DFG+ R
Sbjct: 123 ----TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCR----- 173
Query: 286 EYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 98/233 (42%), Gaps = 49/233 (21%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLV---YRGLIKDFRSLAEHPCAIKVANENASEREKAEF 169
DS + + L +G+G+ G+V Y +++ R++A + N+ ++R E
Sbjct: 17 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYREL 74
Query: 170 LNEASVMKAFDTHHVVKLYGVVS------EGNPTLVIMELMGGGDLKNYLRSCRPDAETD 223
+ +MK + +++ L V + E ++MELM N + + E D
Sbjct: 75 V----LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA----NLCQVIQ--MELD 124
Query: 224 VERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRD-- 281
ER L ++L G+ +L +HRDL N +V D T+K+ DFG+ R
Sbjct: 125 HERMSYLLYQMLC-------GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177
Query: 282 -------IYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEM 327
T YYR APE + + + D+WS G ++ EM
Sbjct: 178 TSFMMTPYVVTRYYR------------APEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 96/226 (42%), Gaps = 30/226 (13%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLV------YRGLIKDFRSLAEHPCAIKVANENASERE 165
K WEV + L +G+G++G V GL + L+ +I A E
Sbjct: 26 KTIWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 84
Query: 166 KAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVE 225
+ + +V+ D + + E N ++ LMG DL N ++ C+ + V+
Sbjct: 85 LLKHMKHENVIGLLDVFTPAR---SLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHVQ 139
Query: 226 RSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
+ ++ G+ Y+ +HRDL N V +D +K+ DFG+ R
Sbjct: 140 F----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----- 184
Query: 286 EYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 185 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 229
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 97/227 (42%), Gaps = 32/227 (14%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIK-VANENASEREKAEFL 170
K WEV + L +G+G++G V F + H A+K ++ S
Sbjct: 15 KTIWEV-PERYQNLSPVGSGAYGSVCAA----FDTKTGHRVAVKKLSRPFQSIIHAKRTY 69
Query: 171 NEASVMKAFDTHHVVKLYGVVS------EGNPTLVIMELMGGGDLKNYLRSCRPDAETDV 224
E ++K +V+ L V + E N ++ LMG DL N ++ C+ + V
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHV 127
Query: 225 ERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYE 284
+ + ++ G+ Y+ +HRDL N V +D +K+ DF + R
Sbjct: 128 QF----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLAR---- 173
Query: 285 TEYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 174 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 104/247 (42%), Gaps = 58/247 (23%)
Query: 106 DDKLYKKDSWEVLRSKVTILDE------LGNGSFGLV---YRGLIKDFRSLAEHPCAIKV 156
D++ Y S EV S T+L +G+G+ G+V Y ++ R++A +
Sbjct: 7 DNQFY---SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLD--RNVAIKKLSRPF 61
Query: 157 ANENASEREKAEFLNEASVMKAFDTHHVVKLYGVVS------EGNPTLVIMELMGGGDLK 210
N+ ++R E + +MK + +++ L V + E ++MELM +L
Sbjct: 62 QNQTHAKRAYRELV----LMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLX 116
Query: 211 NYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLT 270
++ E D ER L ++L G+ +L +HRDL N +V D T
Sbjct: 117 QVIQ-----MELDHERMSYLLYQMLC-------GIKHLHSAGIIHRDLKPSNIVVKSDXT 164
Query: 271 VKVGDFGMTRD---------IYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYG 321
+K+ DFG+ R T YYR APE + + + D+WS G
Sbjct: 165 LKILDFGLARTAGTSFMMTPYVVTRYYR------------APEVILGMGYKENVDIWSVG 212
Query: 322 VVLWEMA 328
++ EM
Sbjct: 213 CIMGEMV 219
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 102/232 (43%), Gaps = 33/232 (14%)
Query: 109 LYKKD----SWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASER 164
YK+D +WE+ ++ V+ +G+G++G V + D RS E K++ SE
Sbjct: 28 FYKQDVNKTAWELPKTYVSP-THVGSGAYGSVCSAI--DKRS-GEKVAIKKLSRPFQSEI 83
Query: 165 EKAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNY--LRSCRPDAET 222
E ++K +V+ L V + + L+N+ P +T
Sbjct: 84 FAKRAYRELLLLKHMQHENVIGLLDVFTPAS------------SLRNFYDFYLVMPFMQT 131
Query: 223 DVER---SPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMT 279
D+++ + +I + ++ G+ Y+ VHRDL N V +D +K+ DFG+
Sbjct: 132 DLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLA 191
Query: 280 RDIYETEYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
R + G++ RW APE + + + + D+WS G ++ EM T
Sbjct: 192 R------HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLT 237
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 98/234 (41%), Gaps = 49/234 (20%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVAN---ENASEREKAEF 169
DS + + L +G+G+ G+V + ++ E AIK + +N + ++A
Sbjct: 11 DSTFTVLKRYQNLKPIGSGAQGIVCAA----YDAILERNVAIKKLSRPFQNQTHAKRA-- 64
Query: 170 LNEASVMKAFDTHHVVKLYGVVS------EGNPTLVIMELMGGGDLKNYLRSCRPDAETD 223
E +MK + +++ L V + E ++MELM +L ++ E D
Sbjct: 65 YRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQ-----MELD 118
Query: 224 VERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRD-- 281
ER L ++L G+ +L +HRDL N +V D T+K+ DFG+ R
Sbjct: 119 HERMSYLLYQMLC-------GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 171
Query: 282 -------IYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMA 328
T YYR APE + + + D+WS G ++ EM
Sbjct: 172 TSFMMTPYVVTRYYR------------APEVILGMGYKENVDLWSVGCIMGEMV 213
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 103/244 (42%), Gaps = 40/244 (16%)
Query: 121 KVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEF----LNEASVM 176
+ T L +G G++G+V S +H +VA + S E + L E ++
Sbjct: 44 RYTQLQYIGEGAYGMV--------SSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQIL 95
Query: 177 KAFDTHHVVKLYGVVS----EGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLS 232
F +V+ + ++ E + I++ + DL L+S + +
Sbjct: 96 LRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSND----------- 144
Query: 233 RILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGS 292
I ++ G+ Y+ +HRDL N ++ +K+ DFG+ R I + E+
Sbjct: 145 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLAR-IADPEH---DH 200
Query: 293 RGFL----PVRWM-APE-SLKDGVFTSHSDVWSYGVVLWEMATLASQP-YQGLSNEQVLN 345
GFL RW APE L +T D+WS G +L EM L+++P + G LN
Sbjct: 201 TGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM--LSNRPIFPGKHYLDQLN 258
Query: 346 WVKG 349
+ G
Sbjct: 259 HILG 262
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 99/234 (42%), Gaps = 49/234 (20%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLV---YRGLIKDFRSLAEHPCAIKVANENASEREKAEF 169
DS + + L +G+G+ G+V Y +++ R++A + N+ ++R E
Sbjct: 22 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYREL 79
Query: 170 LNEASVMKAFDTHHVVKLYGVVS------EGNPTLVIMELMGGGDLKNYLRSCRPDAETD 223
+ +MK + +++ L V + E ++MELM +L ++ E D
Sbjct: 80 V----LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQ-----MELD 129
Query: 224 VERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRD-- 281
ER L ++L G+ +L +HRDL N +V D T+K+ DFG+ R
Sbjct: 130 HERMSYLLYQMLC-------GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 182
Query: 282 -------IYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMA 328
T YYR APE + + + D+WS G ++ EM
Sbjct: 183 TSFMMTPYVVTRYYR------------APEVILGMGYKENVDLWSVGCIMGEMV 224
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 90/222 (40%), Gaps = 50/222 (22%)
Query: 122 VTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDT 181
V I+D G GSF A E RE L E +++
Sbjct: 47 VKIIDVTGGGSFS----------------------AEEVQELREAT--LKEVDILRKVSG 82
Query: 182 H-HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAE 240
H ++++L ++ +LM G+L +YL V S +I++ E
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE-------KVTLSEKETRKIMRALLE 135
Query: 241 VADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRK--GSRGFLPV 298
V + L VHRDL N ++ DD+ +K+ DFG + + E R G+ +L
Sbjct: 136 VICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYL-- 190
Query: 299 RWMAPESLKDGVFTSHS------DVWSYGVVLWEMATLASQP 334
APE ++ + +H D+WS GV+++ + LA P
Sbjct: 191 ---APEIIECSMNDNHPGYGKEVDMWSTGVIMYTL--LAGSP 227
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 96/226 (42%), Gaps = 30/226 (13%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLV------YRGLIKDFRSLAEHPCAIKVANENASERE 165
K WEV + L +G+G++G V GL + L+ +I A E
Sbjct: 17 KTIWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 75
Query: 166 KAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVE 225
+ + +V+ D V + E N ++ LMG DL N ++ C+ + V+
Sbjct: 76 LLKHMKHENVIGLLD---VFTPARSLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHVQ 130
Query: 226 RSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
+ ++ G+ Y+ +HRDL N V +D +K+ DFG+ R
Sbjct: 131 F----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR----- 175
Query: 286 EYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 176 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 102/232 (43%), Gaps = 33/232 (14%)
Query: 109 LYKKD----SWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASER 164
YK+D +WE+ ++ V+ +G+G++G V + D RS E K++ SE
Sbjct: 10 FYKQDVNKTAWELPKTYVSP-THVGSGAYGSVCSAI--DKRS-GEKVAIKKLSRPFQSEI 65
Query: 165 EKAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNY--LRSCRPDAET 222
E ++K +V+ L V + + L+N+ P +T
Sbjct: 66 FAKRAYRELLLLKHMQHENVIGLLDVFTPAS------------SLRNFYDFYLVMPFMQT 113
Query: 223 DVERS---PPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMT 279
D+++ + +I + ++ G+ Y+ VHRDL N V +D +K+ DFG+
Sbjct: 114 DLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLA 173
Query: 280 RDIYETEYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
R + G++ RW APE + + + + D+WS G ++ EM T
Sbjct: 174 R------HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLT 219
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 96/226 (42%), Gaps = 30/226 (13%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLV------YRGLIKDFRSLAEHPCAIKVANENASERE 165
K WEV + L +G+G++G V GL + L+ +I A E
Sbjct: 21 KTIWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 79
Query: 166 KAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVE 225
+ + +V+ D V + E N ++ LMG DL N ++ C+ + V+
Sbjct: 80 LLKHMKHENVIGLLD---VFTPARSLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHVQ 134
Query: 226 RSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
+ ++ G+ Y+ +HRDL N V +D +K+ DFG+ R
Sbjct: 135 F----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR----- 179
Query: 286 EYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 180 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 104/246 (42%), Gaps = 58/246 (23%)
Query: 106 DDKLYKKDSWEVLRSKVTILDE------LGNGSFGLV---YRGLIKDFRSLAEHPCAIKV 156
D++ Y S EV S T+L +G+G+ G+V Y ++ R++A +
Sbjct: 45 DNQFY---SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLD--RNVAIKKLSRPF 99
Query: 157 ANENASEREKAEFLNEASVMKAFDTHHVVKLYGVVS------EGNPTLVIMELMGGGDLK 210
N+ ++R E + +MK + +++ L V + E ++MELM +L
Sbjct: 100 QNQTHAKRAYRELV----LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLC 154
Query: 211 NYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLT 270
++ E D ER L ++L G+ +L +HRDL N +V D T
Sbjct: 155 QVIQ-----MELDHERMSYLLYQMLC-------GIKHLHSAGIIHRDLKPSNIVVKSDCT 202
Query: 271 VKVGDFGMTRDI---------YETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYG 321
+K+ DFG+ R T YYR APE + + + D+WS G
Sbjct: 203 LKILDFGLARTAGTSFMMTPYVVTRYYR------------APEVILGMGYKENVDIWSVG 250
Query: 322 VVLWEM 327
++ EM
Sbjct: 251 CIMGEM 256
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 102/248 (41%), Gaps = 60/248 (24%)
Query: 106 DDKLYKKDSWEVLRSKVTILDE------LGNGSFGLV---YRGLIKDFRSLAEHPCAIKV 156
D++ Y S EV S T+L +G+G+ G+V Y ++ R++A +
Sbjct: 7 DNQFY---SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLD--RNVAIKKLSRPF 61
Query: 157 ANENASEREKAEFLNEASVMKAFDTHHVVKLYGVVS------EGNPTLVIMELMGGGDLK 210
N+ ++R E + +MK + +++ L V + E ++MELM
Sbjct: 62 QNQTHAKRAYRELV----LMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--- 114
Query: 211 NYLRSCRP-DAETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDL 269
C+ E D ER L ++L G+ +L +HRDL N +V D
Sbjct: 115 ----LCQVIQMELDHERMSYLLYQMLC-------GIKHLHSAGIIHRDLKPSNIVVKSDX 163
Query: 270 TVKVGDFGMTRD---------IYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSY 320
T+K+ DFG+ R T YYR APE + + + D+WS
Sbjct: 164 TLKILDFGLARTAGTSFMMTPYVVTRYYR------------APEVILGMGYKENVDIWSV 211
Query: 321 GVVLWEMA 328
G ++ EM
Sbjct: 212 GCIMGEMV 219
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 87/222 (39%), Gaps = 46/222 (20%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEF----LNEASVMKAFDTHH 183
LG G++G+V S P VA + +K F L E ++K F +
Sbjct: 19 LGEGAYGVVC--------SATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHEN 70
Query: 184 VVKLYGV-----VSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVER--SPPTLS--RI 234
++ ++ + N +I ELM +TD+ R S LS I
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELM----------------QTDLHRVISTQMLSDDHI 114
Query: 235 LQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY------- 287
+ + L +HRDL N ++ + +KV DFG+ R I E+
Sbjct: 115 QYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 288 YRKGSRGFLPVRWM-APE-SLKDGVFTSHSDVWSYGVVLWEM 327
+ G F+ RW APE L ++ DVWS G +L E+
Sbjct: 175 QQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 104/246 (42%), Gaps = 58/246 (23%)
Query: 106 DDKLYKKDSWEVLRSKVTILDE------LGNGSFGLV---YRGLIKDFRSLAEHPCAIKV 156
D++ Y S EV S T+L +G+G+ G+V Y ++ R++A +
Sbjct: 45 DNQFY---SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLD--RNVAIKKLSRPF 99
Query: 157 ANENASEREKAEFLNEASVMKAFDTHHVVKLYGVVS------EGNPTLVIMELMGGGDLK 210
N+ ++R E + +MK + +++ L V + E ++MELM +L
Sbjct: 100 QNQTHAKRAYRELV----LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLC 154
Query: 211 NYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLT 270
++ E D ER L ++L G+ +L +HRDL N +V D T
Sbjct: 155 QVIQ-----MELDHERMSYLLYQMLC-------GIKHLHSAGIIHRDLKPSNIVVKSDCT 202
Query: 271 VKVGDFGMTRD---------IYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYG 321
+K+ DFG+ R T YYR APE + + + D+WS G
Sbjct: 203 LKILDFGLARTAGTSFMMTPYVVTRYYR------------APEVILGMGYKENVDIWSVG 250
Query: 322 VVLWEM 327
++ EM
Sbjct: 251 CIMGEM 256
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 98/234 (41%), Gaps = 49/234 (20%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVAN---ENASEREKAEF 169
DS + + L +G+G+ G+V + ++ E AIK + +N + ++A
Sbjct: 17 DSTFTVLKRYQNLKPIGSGAQGIVCAA----YDAILERNVAIKKLSRPFQNQTHAKRA-- 70
Query: 170 LNEASVMKAFDTHHVVKLYGVVS------EGNPTLVIMELMGGGDLKNYLRSCRPDAETD 223
E +MK + +++ L V + E ++MELM +L ++ E D
Sbjct: 71 YRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQ-----MELD 124
Query: 224 VERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI- 282
ER L ++L G+ +L +HRDL N +V D T+K+ DFG+ R
Sbjct: 125 HERMSYLLYQMLC-------GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177
Query: 283 --------YETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMA 328
T YYR APE + + + D+WS G ++ EM
Sbjct: 178 TSFMMEPEVVTRYYR------------APEVILGMGYKENVDLWSVGCIMGEMV 219
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 98/234 (41%), Gaps = 49/234 (20%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLV---YRGLIKDFRSLAEHPCAIKVANENASEREKAEF 169
DS + + L +G+G+ G+V Y ++ R++A + N+ ++R E
Sbjct: 11 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYREL 68
Query: 170 LNEASVMKAFDTHHVVKLYGVVS------EGNPTLVIMELMGGGDLKNYLRSCRPDAETD 223
+ +MK + +++ L V + E ++MELM +L ++ E D
Sbjct: 69 V----LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQ-----MELD 118
Query: 224 VERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRD-- 281
ER L ++L G+ +L +HRDL N +V D T+K+ DFG+ R
Sbjct: 119 HERMSYLLYQMLC-------GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 171
Query: 282 -------IYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMA 328
T YYR APE + + + D+WS G ++ EM
Sbjct: 172 TSFMMTPYVVTRYYR------------APEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 104/247 (42%), Gaps = 58/247 (23%)
Query: 106 DDKLYKKDSWEVLRSKVTILDE------LGNGSFGLV---YRGLIKDFRSLAEHPCAIKV 156
D++ Y S EV S T+L +G+G+ G+V Y ++ R++A +
Sbjct: 8 DNQFY---SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLD--RNVAIKKLSRPF 62
Query: 157 ANENASEREKAEFLNEASVMKAFDTHHVVKLYGVVS------EGNPTLVIMELMGGGDLK 210
N+ ++R E + +MK + +++ L V + E ++MELM +L
Sbjct: 63 QNQTHAKRAYRELV----LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLC 117
Query: 211 NYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLT 270
++ E D ER L ++L G+ +L +HRDL N +V D T
Sbjct: 118 QVIQ-----MELDHERMSYLLYQMLC-------GIKHLHSAGIIHRDLKPSNIVVKSDCT 165
Query: 271 VKVGDFGMTRD---------IYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYG 321
+K+ DFG+ R T YYR APE + + + D+WS G
Sbjct: 166 LKILDFGLARTAGTSFMMTPYVVTRYYR------------APEVILGMGYKENVDIWSVG 213
Query: 322 VVLWEMA 328
++ EM
Sbjct: 214 CIMGEMV 220
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 98/234 (41%), Gaps = 49/234 (20%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLV---YRGLIKDFRSLAEHPCAIKVANENASEREKAEF 169
DS + + L +G+G+ G+V Y ++ R++A + N+ ++R E
Sbjct: 10 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYREL 67
Query: 170 LNEASVMKAFDTHHVVKLYGVVS------EGNPTLVIMELMGGGDLKNYLRSCRPDAETD 223
+ +MK + +++ L V + E ++MELM +L ++ E D
Sbjct: 68 V----LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQ-----MELD 117
Query: 224 VERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRD-- 281
ER L ++L G+ +L +HRDL N +V D T+K+ DFG+ R
Sbjct: 118 HERMSYLLYQMLC-------GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 170
Query: 282 -------IYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMA 328
T YYR APE + + + D+WS G ++ EM
Sbjct: 171 TSFMMTPYVVTRYYR------------APEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 104/247 (42%), Gaps = 58/247 (23%)
Query: 106 DDKLYKKDSWEVLRSKVTILDE------LGNGSFGLV---YRGLIKDFRSLAEHPCAIKV 156
D++ Y S EV S T+L +G+G+ G+V Y ++ R++A +
Sbjct: 7 DNQFY---SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLD--RNVAIKKLSRPF 61
Query: 157 ANENASEREKAEFLNEASVMKAFDTHHVVKLYGVVS------EGNPTLVIMELMGGGDLK 210
N+ ++R E + +MK + +++ L V + E ++MELM +L
Sbjct: 62 QNQTHAKRAYRELV----LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLC 116
Query: 211 NYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLT 270
++ E D ER L ++L G+ +L +HRDL N +V D T
Sbjct: 117 QVIQ-----MELDHERMSYLLYQMLC-------GIKHLHSAGIIHRDLKPSNIVVKSDCT 164
Query: 271 VKVGDFGMTRD---------IYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYG 321
+K+ DFG+ R T YYR APE + + + D+WS G
Sbjct: 165 LKILDFGLARTAGTSFMMTPYVVTRYYR------------APEVILGMGYKENVDIWSVG 212
Query: 322 VVLWEMA 328
++ EM
Sbjct: 213 CIMGEMV 219
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 94/226 (41%), Gaps = 30/226 (13%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLV------YRGLIKDFRSLAEHPCAIKVANENASERE 165
K WEV + L +G+G++G V GL + L+ +I A E
Sbjct: 15 KTIWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 73
Query: 166 KAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVE 225
+ + +V+ D V + E N ++ LMG DL N ++ +
Sbjct: 74 LLKHMKHENVIGLLD---VFTPARSLEEFNDVYLVTHLMGA-DLNNIVKXQKL------- 122
Query: 226 RSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
T + + ++ G+ Y+ +HRDL N V +D +K+ DFG+ R
Sbjct: 123 ----TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR----- 173
Query: 286 EYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 104/247 (42%), Gaps = 58/247 (23%)
Query: 106 DDKLYKKDSWEVLRSKVTILDE------LGNGSFGLV---YRGLIKDFRSLAEHPCAIKV 156
D++ Y S EV S T+L +G+G+ G+V Y ++ R++A +
Sbjct: 7 DNQFY---SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLD--RNVAIKKLSRPF 61
Query: 157 ANENASEREKAEFLNEASVMKAFDTHHVVKLYGVVS------EGNPTLVIMELMGGGDLK 210
N+ ++R E + +MK + +++ L V + E ++MELM +L
Sbjct: 62 QNQTHAKRAYRELV----LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLC 116
Query: 211 NYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLT 270
++ E D ER L ++L G+ +L +HRDL N +V D T
Sbjct: 117 QVIQ-----MELDHERMSYLLYQMLC-------GIKHLHSAGIIHRDLKPSNIVVKSDCT 164
Query: 271 VKVGDFGMTRD---------IYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYG 321
+K+ DFG+ R T YYR APE + + + D+WS G
Sbjct: 165 LKILDFGLARTAGTSFMMTPYVVTRYYR------------APEVILGMGYKENVDIWSVG 212
Query: 322 VVLWEMA 328
++ EM
Sbjct: 213 CIMGEMV 219
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 104/247 (42%), Gaps = 58/247 (23%)
Query: 106 DDKLYKKDSWEVLRSKVTILDE------LGNGSFGLV---YRGLIKDFRSLAEHPCAIKV 156
D++ Y S EV S T+L +G+G+ G+V Y ++ R++A +
Sbjct: 1 DNQFY---SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLD--RNVAIKKLSRPF 55
Query: 157 ANENASEREKAEFLNEASVMKAFDTHHVVKLYGVVS------EGNPTLVIMELMGGGDLK 210
N+ ++R E + +MK + +++ L V + E ++MELM +L
Sbjct: 56 QNQTHAKRAYRELV----LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLC 110
Query: 211 NYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLT 270
++ E D ER L ++L G+ +L +HRDL N +V D T
Sbjct: 111 QVIQ-----MELDHERMSYLLYQMLC-------GIKHLHSAGIIHRDLKPSNIVVKSDCT 158
Query: 271 VKVGDFGMTRD---------IYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYG 321
+K+ DFG+ R T YYR APE + + + D+WS G
Sbjct: 159 LKILDFGLARTAGTSFMMTPYVVTRYYR------------APEVILGMGYKENVDIWSVG 206
Query: 322 VVLWEMA 328
++ EM
Sbjct: 207 CIMGEMV 213
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 104/247 (42%), Gaps = 58/247 (23%)
Query: 106 DDKLYKKDSWEVLRSKVTILDE------LGNGSFGLV---YRGLIKDFRSLAEHPCAIKV 156
D++ Y S EV S T+L +G+G+ G+V Y ++ R++A +
Sbjct: 6 DNQFY---SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLD--RNVAIKKLSRPF 60
Query: 157 ANENASEREKAEFLNEASVMKAFDTHHVVKLYGVVS------EGNPTLVIMELMGGGDLK 210
N+ ++R E + +MK + +++ L V + E ++MELM +L
Sbjct: 61 QNQTHAKRAYRELV----LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLC 115
Query: 211 NYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLT 270
++ E D ER L ++L G+ +L +HRDL N +V D T
Sbjct: 116 QVIQ-----MELDHERMSYLLYQMLC-------GIKHLHSAGIIHRDLKPSNIVVKSDCT 163
Query: 271 VKVGDFGMTRD---------IYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYG 321
+K+ DFG+ R T YYR APE + + + D+WS G
Sbjct: 164 LKILDFGLARTAGTSFMMTPYVVTRYYR------------APEVILGMGYKENVDIWSVG 211
Query: 322 VVLWEMA 328
++ EM
Sbjct: 212 CIMGEMV 218
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 104/247 (42%), Gaps = 58/247 (23%)
Query: 106 DDKLYKKDSWEVLRSKVTILDE------LGNGSFGLV---YRGLIKDFRSLAEHPCAIKV 156
D++ Y S EV S T+L +G+G+ G+V Y ++ R++A +
Sbjct: 8 DNQFY---SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLD--RNVAIKKLSRPF 62
Query: 157 ANENASEREKAEFLNEASVMKAFDTHHVVKLYGVVS------EGNPTLVIMELMGGGDLK 210
N+ ++R E + +MK + +++ L V + E ++MELM +L
Sbjct: 63 QNQTHAKRAYRELV----LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLC 117
Query: 211 NYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLT 270
++ E D ER L ++L G+ +L +HRDL N +V D T
Sbjct: 118 QVIQ-----MELDHERMSYLLYQMLC-------GIKHLHSAGIIHRDLKPSNIVVKSDCT 165
Query: 271 VKVGDFGMTRD---------IYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYG 321
+K+ DFG+ R T YYR APE + + + D+WS G
Sbjct: 166 LKILDFGLARTAGTSFMMTPYVVTRYYR------------APEVILGMGYKENVDIWSVG 213
Query: 322 VVLWEMA 328
++ EM
Sbjct: 214 CIMGEMV 220
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 94/226 (41%), Gaps = 30/226 (13%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLV------YRGLIKDFRSLAEHPCAIKVANENASERE 165
K WEV + L +G+G++G V GL + L+ +I A E
Sbjct: 15 KTIWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 73
Query: 166 KAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVE 225
+ + +V+ D + + E N ++ LMG DL N ++ +
Sbjct: 74 LLKHMKHENVIGLLDVFTPAR---SLEEFNDVYLVTHLMGA-DLNNIVKXQKL------- 122
Query: 226 RSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
T + + ++ G+ Y+ +HRDL N V +D +K+ DFG+ R
Sbjct: 123 ----TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----- 173
Query: 286 EYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 96/226 (42%), Gaps = 30/226 (13%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLV------YRGLIKDFRSLAEHPCAIKVANENASERE 165
K WEV + L +G+G++G V GL + L+ +I A E
Sbjct: 15 KTIWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 73
Query: 166 KAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVE 225
+ + +V+ D V + E N ++ LMG DL N ++ C+ + V+
Sbjct: 74 LLKHMKHENVIGLLD---VFTPARSLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHVQ 128
Query: 226 RSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
+ ++ G+ Y+ +HRDL N V +D +K+ D+G+ R
Sbjct: 129 F----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLAR----- 173
Query: 286 EYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 97/234 (41%), Gaps = 31/234 (13%)
Query: 124 ILDELGNGSFGLVYR---------GLIKDFRSLAEHPCAIKVANENASEREKAEFLNEAS 174
+L LG G +G V++ G I + L + A+ V N + KAE +
Sbjct: 21 LLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKK---AMIVRNAKDTAHTKAE----RN 73
Query: 175 VMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRI 234
+++ +V L G +I+E + GG+L L ER +
Sbjct: 74 ILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL-----------EREGIFMEDT 122
Query: 235 LQM-AAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSR 293
AE++ + +L K ++RDL N M+ VK+ DFG+ ++
Sbjct: 123 ACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFC 182
Query: 294 GFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV 347
G + +MAPE L D WS G ++++M T + P+ G + ++ ++ +
Sbjct: 183 G--TIEYMAPEILMRSGHNRAVDWWSLGALMYDMLT-GAPPFTGENRKKTIDKI 233
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 97/234 (41%), Gaps = 31/234 (13%)
Query: 124 ILDELGNGSFGLVYR---------GLIKDFRSLAEHPCAIKVANENASEREKAEFLNEAS 174
+L LG G +G V++ G I + L + A+ V N + KAE +
Sbjct: 21 LLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKK---AMIVRNAKDTAHTKAE----RN 73
Query: 175 VMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRI 234
+++ +V L G +I+E + GG+L L ER +
Sbjct: 74 ILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL-----------EREGIFMEDT 122
Query: 235 LQM-AAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSR 293
AE++ + +L K ++RDL N M+ VK+ DFG+ ++
Sbjct: 123 ACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFC 182
Query: 294 GFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWV 347
G + +MAPE L D WS G ++++M T + P+ G + ++ ++ +
Sbjct: 183 G--TIEYMAPEILMRSGHNRAVDWWSLGALMYDMLT-GAPPFTGENRKKTIDKI 233
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 87/222 (39%), Gaps = 46/222 (20%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEF----LNEASVMKAFDTHH 183
LG G++G+V S P VA + +K F L E ++K F +
Sbjct: 19 LGEGAYGVVC--------SATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHEN 70
Query: 184 VVKLYGV-----VSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVER--SPPTLS--RI 234
++ ++ + N +I ELM +TD+ R S LS I
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELM----------------QTDLHRVISTQMLSDDHI 114
Query: 235 LQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY------- 287
+ + L +HRDL N ++ + +KV DFG+ R I E+
Sbjct: 115 QYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 288 YRKGSRGFLPVRWM-APE-SLKDGVFTSHSDVWSYGVVLWEM 327
+ G ++ RW APE L ++ DVWS G +L E+
Sbjct: 175 QQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 79/196 (40%), Gaps = 42/196 (21%)
Query: 169 FLNEASVMKAFDTHHVVKLYGVV-----SEGNPTLVIMELMGGGDLKNYLRSCRPDAETD 223
L E +++ + HVVK+ +V + + V++E+ D K R+ P T+
Sbjct: 99 ILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEI-ADSDFKKLFRT--PVYLTE 155
Query: 224 VERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI- 282
+ I + + G+ Y+ +HRDL NC+V D +VKV DFG+ R +
Sbjct: 156 LH--------IKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVD 207
Query: 283 -----------------------YETEYYRKGSRGFLPVRWM-APE-SLKDGVFTSHSDV 317
T+ ++ G + RW APE L +T DV
Sbjct: 208 YPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDV 267
Query: 318 WSYGVVLWEMATLASQ 333
WS G + E+ + +
Sbjct: 268 WSIGCIFAELLNMIKE 283
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 95/226 (42%), Gaps = 30/226 (13%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLV------YRGLIKDFRSLAEHPCAIKVANENASERE 165
K WEV + L +G+G++G V GL + L+ +I A E
Sbjct: 15 KTIWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 73
Query: 166 KAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVE 225
+ + +V+ D V + E N ++ LMG DL N ++ C+ + V+
Sbjct: 74 LLKHMKHENVIGLLD---VFTPARSLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHVQ 128
Query: 226 RSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
+ ++ G+ Y+ +HRDL N V +D +K+ DFG+ R
Sbjct: 129 F----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----- 173
Query: 286 EYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G + RW APE + + + + + D+WS G ++ E+ T
Sbjct: 174 -HTDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 95/217 (43%), Gaps = 26/217 (11%)
Query: 120 SKVTILDELGNGSFGLVYRGLIKDFRS--LAEHPCAIKVANENASEREK-AEFLNEASVM 176
K + + LG+G+FG V+ + K+ + + KV + E K + E +++
Sbjct: 24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAIL 83
Query: 177 KAFDTHHVVKLYGVVSEGNPTLVIMELMGGG-DLKNYL-RSCRPDAETDVERSPPTLSRI 234
+ +++K+ + ++ME G G DL ++ R R D P S I
Sbjct: 84 SRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDE--------PLASYI 135
Query: 235 LQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRG 294
+ ++ + YL K +HRD+ N ++A+D T+K+ DFG Y +G
Sbjct: 136 FR---QLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFG------SAAYLERGKLF 186
Query: 295 FL---PVRWMAPESLKDGVFTSHS-DVWSYGVVLWEM 327
+ + + APE L + ++WS GV L+ +
Sbjct: 187 YTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTL 223
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 96/220 (43%), Gaps = 39/220 (17%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
+GNGSFG+VY+ + D L AIK ++ + + E +M+ D ++V+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELV----AIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRL 78
Query: 188 -YGVVSEGNPT-LVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
Y S G +V + L+ + R R + +++ P + L M ++ +
Sbjct: 79 RYFFYSSGEKKDVVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYM-YQLFRSL 135
Query: 246 AYLADKKFVHRDLAARNCMVADDLTV-KVGDFGMTRDIYETE---------YYRKGSRGF 295
AY+ HRD+ +N ++ D V K+ DFG + + E YYR
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR------ 189
Query: 296 LPVRWMAPESLKDGV-FTSHSDVWSYGVVLWEMATLASQP 334
APE + +TS DVWS G VL E+ L QP
Sbjct: 190 ------APELIFGATDYTSSIDVWSAGCVLAEL--LLGQP 221
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 98/223 (43%), Gaps = 28/223 (12%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLN 171
K WEV + ++ L +G+G++G V D R L + K++ S
Sbjct: 13 KTVWEVPQ-RLQGLRPVGSGAYGSVCSAY--DAR-LRQKVAVKKLSRPFQSLIHARRTYR 68
Query: 172 EASVMKAFDTHHVVKLYGVVS-----EGNPTLVIMELMGGGDLKNYLRSCRPDAETDVER 226
E ++K +V+ L V + E + ++ + G DL N ++ C+ ++ V+
Sbjct: 69 ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVK-CQALSDEHVQF 127
Query: 227 SPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETE 286
+ ++ G+ Y+ +HRDL N V +D +++ DFG+ R E
Sbjct: 128 ----------LVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEE- 176
Query: 287 YYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEM 327
G++ RW APE + + + + + D+WS G ++ E+
Sbjct: 177 -----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 214
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 94/219 (42%), Gaps = 21/219 (9%)
Query: 116 EVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVAN--ENASEREKAEFLNEA 173
++ R I+ +G G+FG V +K+ E A+K+ N E E A F E
Sbjct: 70 QLHREDFEIIKVIGRGAFGEVAVVKMKN----TERIYAMKILNKWEMLKRAETACFREER 125
Query: 174 SVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSR 233
V+ D + L+ + N ++M+ GGDL L ++ P ++R
Sbjct: 126 DVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFE-------DKLPEDMAR 178
Query: 234 ILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSR 293
E+ + + +VHRD+ N ++ + +++ DFG + + +
Sbjct: 179 FY--IGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVA 236
Query: 294 GFLPVRWMAPE---SLKDGV--FTSHSDVWSYGVVLWEM 327
P +++PE +++DG+ + D WS GV ++EM
Sbjct: 237 VGTP-DYISPEILQAMEDGMGKYGPECDWWSLGVCMYEM 274
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 76/172 (44%), Gaps = 37/172 (21%)
Query: 176 MKAFDTHHVVKLYGVVSEGNPTL---VIMELMGGGDLKNYL-RSCR-PDAETDVERSPPT 230
M F T + V G + +P + + M+L +LK+++ R C D E V
Sbjct: 115 MDPFSTKNTV---GQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGV------ 165
Query: 231 LSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI-------- 282
L + ++A+ + +L K +HRDL N D VKVGDFG+ +
Sbjct: 166 ---CLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 222
Query: 283 -------YETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEM 327
Y T + G++ + M+PE + ++ D++S G++L+E+
Sbjct: 223 VLTPMPAYATHXGQVGTKLY-----MSPEQIHGNNYSHKVDIFSLGLILFEL 269
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 94/219 (42%), Gaps = 21/219 (9%)
Query: 116 EVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVAN--ENASEREKAEFLNEA 173
++ R I+ +G G+FG V +K+ E A+K+ N E E A F E
Sbjct: 86 QLHREDFEIIKVIGRGAFGEVAVVKMKN----TERIYAMKILNKWEMLKRAETACFREER 141
Query: 174 SVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSR 233
V+ D + L+ + N ++M+ GGDL L ++ P ++R
Sbjct: 142 DVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFE-------DKLPEDMAR 194
Query: 234 ILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSR 293
E+ + + +VHRD+ N ++ + +++ DFG + + +
Sbjct: 195 FY--IGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVA 252
Query: 294 GFLPVRWMAPE---SLKDGV--FTSHSDVWSYGVVLWEM 327
P +++PE +++DG+ + D WS GV ++EM
Sbjct: 253 VGTP-DYISPEILQAMEDGMGKYGPECDWWSLGVCMYEM 290
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 105/244 (43%), Gaps = 40/244 (16%)
Query: 121 KVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEF----LNEASVM 176
+ T L +G G++G+V S ++ ++VA + S E + L E ++
Sbjct: 44 RYTNLSYIGEGAYGMVC--------SAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 95
Query: 177 KAFDTHHVVKLYGVVSEGNPTL-------VIMELMGGGDLKNYLRSCRPDAETDVERSPP 229
F +++ + ++ PT+ ++ LMG DL L++ +
Sbjct: 96 LRFRHENIIGINDIIRA--PTIEQMKDVYLVTHLMGA-DLYKLLKTQHLSND-------- 144
Query: 230 TLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYR 289
I ++ G+ Y+ +HRDL N ++ +K+ DFG+ R + + ++
Sbjct: 145 ---HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLAR-VADPDHDH 200
Query: 290 KGS-RGFLPVRWM-APE-SLKDGVFTSHSDVWSYGVVLWEMATLASQP-YQGLSNEQVLN 345
G ++ RW APE L +T D+WS G +L EM L+++P + G LN
Sbjct: 201 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM--LSNRPIFPGKHYLDQLN 258
Query: 346 WVKG 349
+ G
Sbjct: 259 HILG 262
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 100/236 (42%), Gaps = 39/236 (16%)
Query: 105 DDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANEN---- 160
DD +Y K LR + + LG+G+ G V F AI++ ++
Sbjct: 138 DDQSVYPK----ALRDEYIMSKTLGSGACGEVKLA----FERKTCKKVAIRIISKRKFAI 189
Query: 161 ASEREKAEFLN---EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCR 217
S RE LN E ++K + ++K+ + +++ELM GG+L + + +
Sbjct: 190 GSAREADPALNVETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNK 248
Query: 218 PDAETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVA---DDLTVKVG 274
E + QM V YL + +HRDL N +++ +D +K+
Sbjct: 249 RLKEATCKLY------FYQMLLAVQ----YLHENGIIHRDLKPENVLLSSQEEDCLIKIT 298
Query: 275 DFGMTRDIYETEYYRK--GSRGFLPVRWMAPE---SLKDGVFTSHSDVWSYGVVLW 325
DFG ++ + ET R G+ +L APE S+ + D WS GV+L+
Sbjct: 299 DFGHSKILGETSLMRTLCGTPTYL-----APEVLVSVGTAGYNRAVDCWSLGVILF 349
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 98/223 (43%), Gaps = 28/223 (12%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLN 171
K WEV + ++ L +G+G++G V D R L + K++ S
Sbjct: 21 KTVWEVPQ-RLQGLRPVGSGAYGSVCSAY--DAR-LRQKVAVKKLSRPFQSLIHARRTYR 76
Query: 172 EASVMKAFDTHHVVKLYGVVS-----EGNPTLVIMELMGGGDLKNYLRSCRPDAETDVER 226
E ++K +V+ L V + E + ++ + G DL N ++ C+ ++ V+
Sbjct: 77 ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVK-CQALSDEHVQF 135
Query: 227 SPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETE 286
+ ++ G+ Y+ +HRDL N V +D +++ DFG+ R E
Sbjct: 136 ----------LVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE- 184
Query: 287 YYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEM 327
G++ RW APE + + + + + D+WS G ++ E+
Sbjct: 185 -----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 222
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 95/226 (42%), Gaps = 30/226 (13%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLV------YRGLIKDFRSLAEHPCAIKVANENASERE 165
K WEV + L +G+G++G V GL + L+ +I A E
Sbjct: 15 KTIWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 73
Query: 166 KAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVE 225
+ + +V+ D + + E N ++ LMG DL N ++ C+ + V+
Sbjct: 74 LLKHMKHENVIGLLDVFTPAR---SLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHVQ 128
Query: 226 RSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
+ ++ G+ Y+ +HRDL N V +D +K+ FG+ R
Sbjct: 129 F----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLAR----- 173
Query: 286 EYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 100/236 (42%), Gaps = 39/236 (16%)
Query: 105 DDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANEN---- 160
DD +Y K LR + + LG+G+ G V F AI++ ++
Sbjct: 124 DDQSVYPK----ALRDEYIMSKTLGSGACGEVKLA----FERKTCKKVAIRIISKRKFAI 175
Query: 161 ASEREKAEFLN---EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCR 217
S RE LN E ++K + ++K+ + +++ELM GG+L + + +
Sbjct: 176 GSAREADPALNVETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNK 234
Query: 218 PDAETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVA---DDLTVKVG 274
E + QM V YL + +HRDL N +++ +D +K+
Sbjct: 235 RLKEATCKLY------FYQMLLAVQ----YLHENGIIHRDLKPENVLLSSQEEDCLIKIT 284
Query: 275 DFGMTRDIYETEYYRK--GSRGFLPVRWMAPE---SLKDGVFTSHSDVWSYGVVLW 325
DFG ++ + ET R G+ +L APE S+ + D WS GV+L+
Sbjct: 285 DFGHSKILGETSLMRTLCGTPTYL-----APEVLVSVGTAGYNRAVDCWSLGVILF 335
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 97/212 (45%), Gaps = 23/212 (10%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
+GNGSFG+VY+ + D L AIK + + + + E +M+ D ++V+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELV----AIKKVLQGKAFKNR-----ELQIMRKLDHCNIVRL 78
Query: 188 -YGVVSEGNPT-LVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
Y S G V + L+ + R R + +++ P + L M ++ +
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYM-YQLFRSL 135
Query: 246 AYLADKKFVHRDLAARNCMVADDLTV-KVGDFGMTRDIYETEYYRKGSRGFLPVRWM-AP 303
AY+ HRD+ +N ++ D V K+ DFG + + E + ++ R+ AP
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----PNVSYICSRYYRAP 191
Query: 304 ESLKDGV-FTSHSDVWSYGVVLWEMATLASQP 334
E + +TS DVWS G VL E+ L QP
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAEL--LLGQP 221
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 104/241 (43%), Gaps = 34/241 (14%)
Query: 121 KVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEF----LNEASVM 176
+ T L +G G++G+V S ++ ++VA + S E + L E ++
Sbjct: 26 RYTNLSYIGEGAYGMVC--------SAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 77
Query: 177 KAFDTHHVVKLYGVVS----EGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLS 232
AF +++ + ++ E + I++ + DL L++ +
Sbjct: 78 LAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND----------- 126
Query: 233 RILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGS 292
I ++ G+ Y+ +HRDL N ++ +K+ DFG+ R + + ++ G
Sbjct: 127 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGF 185
Query: 293 -RGFLPVRWM-APE-SLKDGVFTSHSDVWSYGVVLWEMATLASQP-YQGLSNEQVLNWVK 348
++ RW APE L +T D+WS G +L EM L+++P + G LN +
Sbjct: 186 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM--LSNRPIFPGKHYLDQLNHIL 243
Query: 349 G 349
G
Sbjct: 244 G 244
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 89/204 (43%), Gaps = 19/204 (9%)
Query: 127 ELGNGSFGLVYRG-LIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVV 185
+L GL G +++ F CA+K+ ++ R++ + +AS ++
Sbjct: 12 QLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVC--IL 69
Query: 186 KLYGVVSEGNPTL-VIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADG 244
+Y + G L +IME M GG+L + ++ A T+ E + ++ ++
Sbjct: 70 DVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAA--------EIMRDIGTA 121
Query: 245 MAYLADKKFVHRDLAARNCMVAD---DLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWM 301
+ +L HRD+ N + D +K+ DFG + ET + + P ++
Sbjct: 122 IQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK---ETTQNALQTPCYTPY-YV 177
Query: 302 APESLKDGVFTSHSDVWSYGVVLW 325
APE L + D+WS GV+++
Sbjct: 178 APEVLGPEKYDKSCDMWSLGVIMY 201
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 86/222 (38%), Gaps = 46/222 (20%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEF----LNEASVMKAFDTHH 183
LG G++G+V S P VA + +K F L E ++K F +
Sbjct: 19 LGEGAYGVVC--------SATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHEN 70
Query: 184 VVKLYGV-----VSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVER--SPPTLS--RI 234
++ ++ + N +I ELM +TD+ R S LS I
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELM----------------QTDLHRVISTQMLSDDHI 114
Query: 235 LQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEY------- 287
+ + L +HRDL N ++ + +KV DFG+ R I E+
Sbjct: 115 QYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 288 YRKGSRGFLPVRWM-APE-SLKDGVFTSHSDVWSYGVVLWEM 327
+ G + RW APE L ++ DVWS G +L E+
Sbjct: 175 QQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 103/228 (45%), Gaps = 34/228 (14%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIK-VANENASEREKAEFL 170
K +WEV R+ L +G+G++G V + D R+ A+ AIK + SE
Sbjct: 18 KTAWEV-RAVYRDLQPVGSGAYGAVCSAV--DGRTGAK--VAIKKLYRPFQSELFAKRAY 72
Query: 171 NEASVMKAFDTHHVVKLYGVVSEGNPTL-------VIMELMGGGDLKNYLRSCRPDAETD 223
E ++K +V+ L V + + TL ++M MG DL ++ + +
Sbjct: 73 RELRLLKHMRHENVIGLLDVFTP-DETLDDFTDFYLVMPFMGT-DLGKLMKHEKLGED-- 128
Query: 224 VERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIY 283
RI + ++ G+ Y+ +HRDL N V +D +K+ DFG+ R
Sbjct: 129 ---------RIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQA- 178
Query: 284 ETEYYRKGSRGFLPVRWM-APESLKDGV-FTSHSDVWSYGVVLWEMAT 329
++E G + RW APE + + + +T D+WS G ++ EM T
Sbjct: 179 DSEM-----XGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMIT 221
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 97/212 (45%), Gaps = 23/212 (10%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
+GNGSFG+VY+ + D L AIK ++ + + E +M+ D ++V+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELV----AIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRL 78
Query: 188 -YGVVSEGNPT-LVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
Y S G V + L+ + R R + +++ P + L M ++ +
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYM-YQLFRSL 135
Query: 246 AYLADKKFVHRDLAARNCMVADDLTV-KVGDFGMTRDIYETEYYRKGSRGFLPVRWM-AP 303
AY+ HRD+ +N ++ D V K+ DFG + + E + ++ R+ AP
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----PNVSYICSRYYRAP 191
Query: 304 ESLKDGV-FTSHSDVWSYGVVLWEMATLASQP 334
E + +TS DVWS G VL E+ L QP
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAEL--LLGQP 221
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 90/207 (43%), Gaps = 25/207 (12%)
Query: 127 ELGNGSFGLVYRG-LIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVV 185
+L GL G +++ F CA+K+ ++ R++ + +AS H+V
Sbjct: 31 QLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQAS-----GGPHIV 85
Query: 186 ---KLYGVVSEGNPTL-VIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEV 241
+Y + G L +IME M GG+L + ++ A T+ E + ++ ++
Sbjct: 86 CILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAA--------EIMRDI 137
Query: 242 ADGMAYLADKKFVHRDLAARNCMVAD---DLTVKVGDFGMTRDIYETEYYRKGSRGFLPV 298
+ +L HRD+ N + D +K+ DFG + ET + + P
Sbjct: 138 GTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK---ETTQNALQTPCYTPY 194
Query: 299 RWMAPESLKDGVFTSHSDVWSYGVVLW 325
++APE L + D+WS GV+++
Sbjct: 195 -YVAPEVLGPEKYDKSCDMWSLGVIMY 220
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 97/212 (45%), Gaps = 23/212 (10%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
+GNGSFG+VY+ + D L AIK + + + + E +M+ D ++V+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELV----AIKKVLQGKAFKNR-----ELQIMRKLDHCNIVRL 78
Query: 188 -YGVVSEGNPT-LVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
Y S G V + L+ + R R + +++ P + L M ++ +
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYM-YQLFRSL 135
Query: 246 AYLADKKFVHRDLAARNCMVADDLTV-KVGDFGMTRDIYETEYYRKGSRGFLPVRWM-AP 303
AY+ HRD+ +N ++ D V K+ DFG + + E + ++ R+ AP
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----PNVSYICSRYYRAP 191
Query: 304 ESLKDGV-FTSHSDVWSYGVVLWEMATLASQP 334
E + +TS DVWS G VL E+ L QP
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAEL--LLGQP 221
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 101/237 (42%), Gaps = 26/237 (10%)
Query: 121 KVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFD 180
+ T L +G G++G+V + +L + AIK + + L E ++ F
Sbjct: 28 RYTNLSYIGEGAYGMVCSA----YDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFR 83
Query: 181 THHVVKLYGVVS----EGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQ 236
+++ + ++ E + I++ + DL L++ + I
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND-----------HICY 132
Query: 237 MAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGS-RGF 295
++ G+ Y+ +HRDL N ++ +K+ DFG+ R + + ++ G +
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFLTEY 191
Query: 296 LPVRWM-APE-SLKDGVFTSHSDVWSYGVVLWEMATLASQP-YQGLSNEQVLNWVKG 349
+ RW APE L +T D+WS G +L EM L+++P + G LN + G
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM--LSNRPIFPGKHYLDQLNHILG 246
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 95/226 (42%), Gaps = 30/226 (13%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLV------YRGLIKDFRSLAEHPCAIKVANENASERE 165
K WEV + L +G+G++G V GL + L+ +I A E
Sbjct: 15 KTIWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 73
Query: 166 KAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVE 225
+ + +V+ D V + E N ++ LMG DL N ++ C+ + V+
Sbjct: 74 LLKHMKHENVIGLLD---VFTPARSLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHVQ 128
Query: 226 RSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
+ ++ G+ Y+ +HRDL N V +D +K+ D G+ R
Sbjct: 129 F----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLAR----- 173
Query: 286 EYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 97/223 (43%), Gaps = 28/223 (12%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLN 171
K WEV + ++ L +G+G++G V D R L + K++ S
Sbjct: 21 KTVWEVPQ-RLQGLRPVGSGAYGSVCSAY--DAR-LRQKVAVKKLSRPFQSLIHARRTYR 76
Query: 172 EASVMKAFDTHHVVKLYGVVS-----EGNPTLVIMELMGGGDLKNYLRSCRPDAETDVER 226
E ++K +V+ L V + E + ++ + G DL N ++S A +D
Sbjct: 77 ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKS---QALSD--- 130
Query: 227 SPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETE 286
+ + ++ G+ Y+ +HRDL N V +D +++ DFG+ R E
Sbjct: 131 -----EHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE- 184
Query: 287 YYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEM 327
G++ RW APE + + + + + D+WS G ++ E+
Sbjct: 185 -----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 222
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 95/220 (43%), Gaps = 39/220 (17%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
+GNGSFG+VY+ + D L AIK ++ + + E +M+ D ++V+L
Sbjct: 29 IGNGSFGVVYQAKLCDSGELV----AIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRL 79
Query: 188 -YGVVSEGNPT-LVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
Y S G V + L+ + R R + +++ P + L M ++ +
Sbjct: 80 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYM-YQLFRSL 136
Query: 246 AYLADKKFVHRDLAARNCMVADDLTV-KVGDFGMTRDIYETE---------YYRKGSRGF 295
AY+ HRD+ +N ++ D V K+ DFG + + E YYR
Sbjct: 137 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR------ 190
Query: 296 LPVRWMAPESLKDGV-FTSHSDVWSYGVVLWEMATLASQP 334
APE + +TS DVWS G VL E+ L QP
Sbjct: 191 ------APELIFGATDYTSSIDVWSAGCVLAEL--LLGQP 222
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 95/220 (43%), Gaps = 39/220 (17%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
+GNGSFG+VY+ + D L AIK ++ + + E +M+ D ++V+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELV----AIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRL 78
Query: 188 -YGVVSEGNPT-LVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
Y S G V + L+ + R R + +++ P + L M ++ +
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYM-YQLFRSL 135
Query: 246 AYLADKKFVHRDLAARNCMVADDLTV-KVGDFGMTRDIYETE---------YYRKGSRGF 295
AY+ HRD+ +N ++ D V K+ DFG + + E YYR
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR------ 189
Query: 296 LPVRWMAPESLKDGV-FTSHSDVWSYGVVLWEMATLASQP 334
APE + +TS DVWS G VL E+ L QP
Sbjct: 190 ------APELIFGATDYTSSIDVWSAGCVLAEL--LLGQP 221
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 95/226 (42%), Gaps = 30/226 (13%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLV------YRGLIKDFRSLAEHPCAIKVANENASERE 165
K WEV + L +G+G++G V GL + L+ +I A E
Sbjct: 15 KTIWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 73
Query: 166 KAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVE 225
+ + +V+ D V + E N ++ LMG DL N ++ C+ + V+
Sbjct: 74 LLKHMKHENVIGLLD---VFTPARSLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHVQ 128
Query: 226 RSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
+ ++ G+ Y+ +HRDL N V +D +K+ D G+ R
Sbjct: 129 F----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLAR----- 173
Query: 286 EYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 95/220 (43%), Gaps = 39/220 (17%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
+GNGSFG+VY+ + D L AIK ++ + + E +M+ D ++V+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELV----AIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRL 78
Query: 188 -YGVVSEGNPT-LVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
Y S G V + L+ + R R + +++ P + L M ++ +
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYM-YQLFRSL 135
Query: 246 AYLADKKFVHRDLAARNCMVADDLTV-KVGDFGMTRDIYETE---------YYRKGSRGF 295
AY+ HRD+ +N ++ D V K+ DFG + + E YYR
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR------ 189
Query: 296 LPVRWMAPESLKDGV-FTSHSDVWSYGVVLWEMATLASQP 334
APE + +TS DVWS G VL E+ L QP
Sbjct: 190 ------APELIFGATDYTSSIDVWSAGCVLAEL--LLGQP 221
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 97/212 (45%), Gaps = 23/212 (10%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
+GNGSFG+VY+ + D L AIK ++ + + E +M+ D ++V+L
Sbjct: 41 IGNGSFGVVYQAKLCDSGELV----AIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRL 91
Query: 188 -YGVVSEGNPT-LVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
Y S G V + L+ + R R + +++ P + L M ++ +
Sbjct: 92 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYM-YQLFRSL 148
Query: 246 AYLADKKFVHRDLAARNCMVADDLTV-KVGDFGMTRDIYETEYYRKGSRGFLPVRWM-AP 303
AY+ HRD+ +N ++ D V K+ DFG + + E + ++ R+ AP
Sbjct: 149 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----PNVSYICSRYYRAP 204
Query: 304 ESLKDGV-FTSHSDVWSYGVVLWEMATLASQP 334
E + +TS DVWS G VL E+ L QP
Sbjct: 205 ELIFGATDYTSSIDVWSAGCVLAEL--LLGQP 234
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 95/220 (43%), Gaps = 39/220 (17%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
+GNGSFG+VY+ + D L AIK ++ + + E +M+ D ++V+L
Sbjct: 32 IGNGSFGVVYQAKLCDSGELV----AIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRL 82
Query: 188 -YGVVSEGNPT-LVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
Y S G V + L+ + R R + +++ P + L M ++ +
Sbjct: 83 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYM-YQLFRSL 139
Query: 246 AYLADKKFVHRDLAARNCMVADDLTV-KVGDFGMTRDIYETE---------YYRKGSRGF 295
AY+ HRD+ +N ++ D V K+ DFG + + E YYR
Sbjct: 140 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR------ 193
Query: 296 LPVRWMAPESLKDGV-FTSHSDVWSYGVVLWEMATLASQP 334
APE + +TS DVWS G VL E+ L QP
Sbjct: 194 ------APELIFGATDYTSSIDVWSAGCVLAEL--LLGQP 225
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 101/237 (42%), Gaps = 26/237 (10%)
Query: 121 KVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFD 180
+ T L +G G++G+V + +L + AIK + + L E ++ F
Sbjct: 22 RYTNLSYIGEGAYGMVCSA----YDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 77
Query: 181 THHVVKLYGVVS----EGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQ 236
+++ + ++ E + I++ + DL L++ + I
Sbjct: 78 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND-----------HICY 126
Query: 237 MAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGS-RGF 295
++ G+ Y+ +HRDL N ++ +K+ DFG+ R + + ++ G +
Sbjct: 127 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEY 185
Query: 296 LPVRWM-APE-SLKDGVFTSHSDVWSYGVVLWEMATLASQP-YQGLSNEQVLNWVKG 349
+ RW APE L +T D+WS G +L EM L+++P + G LN + G
Sbjct: 186 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM--LSNRPIFPGKHYLDQLNHILG 240
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 104/241 (43%), Gaps = 34/241 (14%)
Query: 121 KVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEF----LNEASVM 176
+ T L +G G++G+V S ++ ++VA + S E + L E ++
Sbjct: 26 RYTNLSYIGEGAYGMVC--------SAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 77
Query: 177 KAFDTHHVVKLYGVVS----EGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLS 232
AF +++ + ++ E + I++ + DL L++ +
Sbjct: 78 LAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND----------- 126
Query: 233 RILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGS 292
I ++ G+ Y+ +HRDL N ++ +K+ DFG+ R + + ++ G
Sbjct: 127 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLAR-VADPDHDHTGF 185
Query: 293 -RGFLPVRWM-APE-SLKDGVFTSHSDVWSYGVVLWEMATLASQP-YQGLSNEQVLNWVK 348
++ RW APE L +T D+WS G +L EM L+++P + G LN +
Sbjct: 186 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM--LSNRPIFPGKHYLDQLNHIL 243
Query: 349 G 349
G
Sbjct: 244 G 244
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 95/226 (42%), Gaps = 30/226 (13%)
Query: 112 KDSWEVLRSKVTILDELGNGSFGLV------YRGLIKDFRSLAEHPCAIKVANENASERE 165
K WEV + L +G+G++G V GL + L+ +I A E
Sbjct: 15 KTIWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 73
Query: 166 KAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVE 225
+ + +V+ D + + E N ++ LMG DL N ++ C+ + V+
Sbjct: 74 LLKHMKHENVIGLLDVFTPAR---SLEEFNDVYLVTHLMGA-DLNNIVK-CQKLTDDHVQ 128
Query: 226 RSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYET 285
+ ++ G+ Y+ +HRDL N V +D +K+ D G+ R
Sbjct: 129 F----------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLAR----- 173
Query: 286 EYYRKGSRGFLPVRWM-APESLKDGVFTSHS-DVWSYGVVLWEMAT 329
+ G++ RW APE + + + + + D+WS G ++ E+ T
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 101/237 (42%), Gaps = 26/237 (10%)
Query: 121 KVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFD 180
+ T L +G G++G+V + +L + AIK + + L E ++ F
Sbjct: 29 RYTNLSYIGEGAYGMVCSA----YDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 84
Query: 181 THHVVKLYGVVS----EGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQ 236
+++ + ++ E + I++ + DL L++ + I
Sbjct: 85 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND-----------HICY 133
Query: 237 MAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGS-RGF 295
++ G+ Y+ +HRDL N ++ +K+ DFG+ R + + ++ G +
Sbjct: 134 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEY 192
Query: 296 LPVRWM-APE-SLKDGVFTSHSDVWSYGVVLWEMATLASQP-YQGLSNEQVLNWVKG 349
+ RW APE L +T D+WS G +L EM L+++P + G LN + G
Sbjct: 193 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM--LSNRPIFPGKHYLDQLNHILG 247
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 101/237 (42%), Gaps = 26/237 (10%)
Query: 121 KVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFD 180
+ T L +G G++G+V + +L + AIK + + L E ++ F
Sbjct: 30 RYTNLSYIGEGAYGMVCSA----YDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 85
Query: 181 THHVVKLYGVVS----EGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQ 236
+++ + ++ E + I++ + DL L++ + I
Sbjct: 86 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND-----------HICY 134
Query: 237 MAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGS-RGF 295
++ G+ Y+ +HRDL N ++ +K+ DFG+ R + + ++ G +
Sbjct: 135 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEY 193
Query: 296 LPVRWM-APE-SLKDGVFTSHSDVWSYGVVLWEMATLASQP-YQGLSNEQVLNWVKG 349
+ RW APE L +T D+WS G +L EM L+++P + G LN + G
Sbjct: 194 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM--LSNRPIFPGKHYLDQLNHILG 248
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 101/237 (42%), Gaps = 26/237 (10%)
Query: 121 KVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFD 180
+ T L +G G++G+V + +L + AIK + + L E ++ F
Sbjct: 21 RYTNLSYIGEGAYGMVCSA----YDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 76
Query: 181 THHVVKLYGVVS----EGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQ 236
+++ + ++ E + I++ + DL L++ + I
Sbjct: 77 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND-----------HICY 125
Query: 237 MAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGS-RGF 295
++ G+ Y+ +HRDL N ++ +K+ DFG+ R + + ++ G +
Sbjct: 126 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEY 184
Query: 296 LPVRWM-APE-SLKDGVFTSHSDVWSYGVVLWEMATLASQP-YQGLSNEQVLNWVKG 349
+ RW APE L +T D+WS G +L EM L+++P + G LN + G
Sbjct: 185 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM--LSNRPIFPGKHYLDQLNHILG 239
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 101/237 (42%), Gaps = 26/237 (10%)
Query: 121 KVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFD 180
+ T L +G G++G+V + +L + AIK + + L E ++ F
Sbjct: 28 RYTNLSYIGEGAYGMVCSA----YDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 83
Query: 181 THHVVKLYGVVS----EGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQ 236
+++ + ++ E + I++ + DL L++ + I
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND-----------HICY 132
Query: 237 MAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGS-RGF 295
++ G+ Y+ +HRDL N ++ +K+ DFG+ R + + ++ G +
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEY 191
Query: 296 LPVRWM-APE-SLKDGVFTSHSDVWSYGVVLWEMATLASQP-YQGLSNEQVLNWVKG 349
+ RW APE L +T D+WS G +L EM L+++P + G LN + G
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM--LSNRPIFPGKHYLDQLNHILG 246
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 101/237 (42%), Gaps = 26/237 (10%)
Query: 121 KVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFD 180
+ T L +G G++G+V + +L + AIK + + L E ++ F
Sbjct: 22 RYTNLSYIGEGAYGMVCSA----YDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 77
Query: 181 THHVVKLYGVVS----EGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQ 236
+++ + ++ E + I++ + DL L++ + I
Sbjct: 78 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND-----------HICY 126
Query: 237 MAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGS-RGF 295
++ G+ Y+ +HRDL N ++ +K+ DFG+ R + + ++ G +
Sbjct: 127 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEY 185
Query: 296 LPVRWM-APE-SLKDGVFTSHSDVWSYGVVLWEMATLASQP-YQGLSNEQVLNWVKG 349
+ RW APE L +T D+WS G +L EM L+++P + G LN + G
Sbjct: 186 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM--LSNRPIFPGKHYLDQLNHILG 240
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 101/237 (42%), Gaps = 26/237 (10%)
Query: 121 KVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFD 180
+ T L +G G++G+V + +L + AIK + + L E ++ F
Sbjct: 28 RYTNLSYIGEGAYGMVCSA----YDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 83
Query: 181 THHVVKLYGVVS----EGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQ 236
+++ + ++ E + I++ + DL L++ + I
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND-----------HICY 132
Query: 237 MAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGS-RGF 295
++ G+ Y+ +HRDL N ++ +K+ DFG+ R + + ++ G +
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFLTEY 191
Query: 296 LPVRWM-APE-SLKDGVFTSHSDVWSYGVVLWEMATLASQP-YQGLSNEQVLNWVKG 349
+ RW APE L +T D+WS G +L EM L+++P + G LN + G
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM--LSNRPIFPGKHYLDQLNHILG 246
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 82/189 (43%), Gaps = 34/189 (17%)
Query: 155 KVANENASEREKAE-FLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDL---- 209
K N+ S + K + F NE ++ + + G+++ + +I E M +
Sbjct: 75 KSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFD 134
Query: 210 -------KNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAYLADKKFV-HRDLAAR 261
KNY +C + I + V + +Y+ ++K + HRD+
Sbjct: 135 EYFFVLDKNY--TCFIPIQV-----------IKCIIKSVLNSFSYIHNEKNICHRDVKPS 181
Query: 262 NCMVADDLTVKVGDFGMTRDIYETEYYRKGSRG---FLPVRWMAPESLKDGVFTSHSDVW 318
N ++ + VK+ DFG + Y + KGSRG F+P + + ES +G + D+W
Sbjct: 182 NILMDKNGRVKLSDFGESE--YMVDKKIKGSRGTYEFMPPEFFSNESSYNG---AKVDIW 236
Query: 319 SYGVVLWEM 327
S G+ L+ M
Sbjct: 237 SLGICLYVM 245
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 102/237 (43%), Gaps = 26/237 (10%)
Query: 121 KVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFD 180
+ T L +G G++G+V + +L + AIK + + L E ++ F
Sbjct: 28 RYTNLSYIGEGAYGMVCSA----YDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 83
Query: 181 THHVVKLYGVVS----EGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQ 236
+++ + ++ E + I++ + DL L+ C+ + I
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-CQHLSN----------DHICY 132
Query: 237 MAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGS-RGF 295
++ G+ Y+ +HRDL N ++ +K+ DFG+ R + + ++ G +
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEY 191
Query: 296 LPVRWM-APE-SLKDGVFTSHSDVWSYGVVLWEMATLASQP-YQGLSNEQVLNWVKG 349
+ RW APE L +T D+WS G +L EM L+++P + G LN + G
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM--LSNRPIFPGKHYLDQLNHILG 246
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 94/220 (42%), Gaps = 39/220 (17%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
+GNGSFG+VY+ + D L AIK + + + + E +M+ D ++V+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELV----AIKKVLQGKAFKNR-----ELQIMRKLDHCNIVRL 78
Query: 188 -YGVVSEGNPT-LVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
Y S G V + L+ R R + +++ P + L M ++ +
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPATVYRVAR--HYSRAKQTLPVIYVKLYM-YQLFRSL 135
Query: 246 AYLADKKFVHRDLAARNCMVADDLTV-KVGDFGMTRDIYETE---------YYRKGSRGF 295
AY+ HRD+ +N ++ D V K+ DFG + + E YYR
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR------ 189
Query: 296 LPVRWMAPESLKDGV-FTSHSDVWSYGVVLWEMATLASQP 334
APE + +TS DVWS G VL E+ L QP
Sbjct: 190 ------APELIFGATDYTSSIDVWSAGCVLAEL--LLGQP 221
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 95/220 (43%), Gaps = 39/220 (17%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
+GNGSFG+VY+ + D L AIK ++ + + E +M+ D ++V+L
Sbjct: 47 IGNGSFGVVYQAKLCDSGELV----AIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRL 97
Query: 188 -YGVVSEGNPT-LVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
Y S G V + L+ + R R + +++ P + L M ++ +
Sbjct: 98 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYM-YQLFRSL 154
Query: 246 AYLADKKFVHRDLAARNCMVADDLTV-KVGDFGMTRDIYETE---------YYRKGSRGF 295
AY+ HRD+ +N ++ D V K+ DFG + + E YYR
Sbjct: 155 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR------ 208
Query: 296 LPVRWMAPESLKDGV-FTSHSDVWSYGVVLWEMATLASQP 334
APE + +TS DVWS G VL E+ L QP
Sbjct: 209 ------APELIFGATDYTSSIDVWSAGCVLAEL--LLGQP 240
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 95/220 (43%), Gaps = 39/220 (17%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
+GNGSFG+VY+ + D L AIK ++ + + E +M+ D ++V+L
Sbjct: 36 IGNGSFGVVYQAKLCDSGELV----AIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRL 86
Query: 188 -YGVVSEGNPT-LVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
Y S G V + L+ + R R + +++ P + L M ++ +
Sbjct: 87 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYM-YQLFRSL 143
Query: 246 AYLADKKFVHRDLAARNCMVADDLTV-KVGDFGMTRDIYETE---------YYRKGSRGF 295
AY+ HRD+ +N ++ D V K+ DFG + + E YYR
Sbjct: 144 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR------ 197
Query: 296 LPVRWMAPESLKDGV-FTSHSDVWSYGVVLWEMATLASQP 334
APE + +TS DVWS G VL E+ L QP
Sbjct: 198 ------APELIFGATDYTSSIDVWSAGCVLAEL--LLGQP 229
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 95/220 (43%), Gaps = 39/220 (17%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
+GNGSFG+VY+ + D L AIK ++ + + E +M+ D ++V+L
Sbjct: 40 IGNGSFGVVYQAKLCDSGELV----AIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRL 90
Query: 188 -YGVVSEGNPT-LVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
Y S G V + L+ + R R + +++ P + L M ++ +
Sbjct: 91 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYM-YQLFRSL 147
Query: 246 AYLADKKFVHRDLAARNCMVADDLTV-KVGDFGMTRDIYETE---------YYRKGSRGF 295
AY+ HRD+ +N ++ D V K+ DFG + + E YYR
Sbjct: 148 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR------ 201
Query: 296 LPVRWMAPESLKDGV-FTSHSDVWSYGVVLWEMATLASQP 334
APE + +TS DVWS G VL E+ L QP
Sbjct: 202 ------APELIFGATDYTSSIDVWSAGCVLAEL--LLGQP 233
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 97/212 (45%), Gaps = 23/212 (10%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
+GNGSFG+VY+ + D L AIK ++ + + E +M+ D ++V+L
Sbjct: 33 IGNGSFGVVYQAKLCDSGELV----AIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRL 83
Query: 188 -YGVVSEGNPT-LVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
Y S G V + L+ + R R + +++ P + L M ++ +
Sbjct: 84 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYM-YQLFRSL 140
Query: 246 AYLADKKFVHRDLAARNCMVADDLTV-KVGDFGMTRDIYETEYYRKGSRGFLPVRWM-AP 303
AY+ HRD+ +N ++ D V K+ DFG + + E + ++ R+ AP
Sbjct: 141 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----PNVSYICSRYYRAP 196
Query: 304 ESLKDGV-FTSHSDVWSYGVVLWEMATLASQP 334
E + +TS DVWS G VL E+ L QP
Sbjct: 197 ELIFGATDYTSSIDVWSAGCVLAEL--LLGQP 226
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 95/220 (43%), Gaps = 39/220 (17%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
+GNGSFG+VY+ + D L AIK ++ + + E +M+ D ++V+L
Sbjct: 40 IGNGSFGVVYQAKLCDSGELV----AIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRL 90
Query: 188 -YGVVSEGNPT-LVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
Y S G V + L+ + R R + +++ P + L M ++ +
Sbjct: 91 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYM-YQLFRSL 147
Query: 246 AYLADKKFVHRDLAARNCMVADDLTV-KVGDFGMTRDIYETE---------YYRKGSRGF 295
AY+ HRD+ +N ++ D V K+ DFG + + E YYR
Sbjct: 148 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR------ 201
Query: 296 LPVRWMAPESLKDGV-FTSHSDVWSYGVVLWEMATLASQP 334
APE + +TS DVWS G VL E+ L QP
Sbjct: 202 ------APELIFGATDYTSSIDVWSAGCVLAEL--LLGQP 233
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 103/246 (41%), Gaps = 58/246 (23%)
Query: 106 DDKLYKKDSWEVLRSKVTILDE------LGNGSFGLVYRGLIKDFRSLAEHPCAIKVAN- 158
D++ Y S EV S T+L +G+G+ G+V F ++ A+K +
Sbjct: 7 DNQFY---SVEVADSTFTVLKRYQQLKPIGSGAQGIVCAA----FDTVLGINVAVKKLSR 59
Query: 159 --ENASEREKAEFLNEASVMKAFDTHHVVKLYGVVS------EGNPTLVIMELMGGGDLK 210
+N + ++A E ++K + +++ L V + E ++MELM +L
Sbjct: 60 PFQNQTHAKRA--YRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLC 116
Query: 211 NYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLT 270
+ E D ER L ++L G+ +L +HRDL N +V D T
Sbjct: 117 QVIH-----MELDHERMSYLLYQMLC-------GIKHLHSAGIIHRDLKPSNIVVKSDCT 164
Query: 271 VKVGDFGMTRDIYE---------TEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYG 321
+K+ DFG+ R T YYR APE + + ++ D+WS G
Sbjct: 165 LKILDFGLARTACTNFMMTPYVVTRYYR------------APEVILGMGYAANVDIWSVG 212
Query: 322 VVLWEM 327
++ E+
Sbjct: 213 CIMGEL 218
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 172 EASVMKAFDTH-HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPT 230
E V + H +V L+ + ++E + GGDL +++ R + P
Sbjct: 70 EKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR--------KLPEE 121
Query: 231 LSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRK 290
+R +AE++ + YL ++ ++RDL N ++ + +K+ D+GM + E R
Sbjct: 122 HARFY--SAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK-----EGLRP 174
Query: 291 G--SRGFLPV-RWMAPESLKDGVFTSHSDVWSYGVVLWEM 327
G + F ++APE L+ + D W+ GV+++EM
Sbjct: 175 GDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEM 214
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 172 EASVMKAFDTH-HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPT 230
E V + H +V L+ + ++E + GGDL +++ R + P
Sbjct: 55 EKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR--------KLPEE 106
Query: 231 LSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRK 290
+R +AE++ + YL ++ ++RDL N ++ + +K+ D+GM + E R
Sbjct: 107 HARFY--SAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK-----EGLRP 159
Query: 291 G--SRGFLPV-RWMAPESLKDGVFTSHSDVWSYGVVLWEM 327
G + F ++APE L+ + D W+ GV+++EM
Sbjct: 160 GDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEM 199
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 97/212 (45%), Gaps = 23/212 (10%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
+GNGSFG+VY+ + D L AIK ++ + + E +M+ D ++V+L
Sbjct: 56 IGNGSFGVVYQAKLCDSGELV----AIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRL 106
Query: 188 -YGVVSEGNPT-LVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
Y S G V + L+ + R R + +++ P + L M ++ +
Sbjct: 107 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYM-YQLFRSL 163
Query: 246 AYLADKKFVHRDLAARNCMVADDLTV-KVGDFGMTRDIYETEYYRKGSRGFLPVRWM-AP 303
AY+ HRD+ +N ++ D V K+ DFG + + E + ++ R+ AP
Sbjct: 164 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----PNVSYICSRYYRAP 219
Query: 304 ESLKDGV-FTSHSDVWSYGVVLWEMATLASQP 334
E + +TS DVWS G VL E+ L QP
Sbjct: 220 ELIFGATDYTSSIDVWSAGCVLAEL--LLGQP 249
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 96/225 (42%), Gaps = 35/225 (15%)
Query: 116 EVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANEN----ASEREKAEFLN 171
+ LR + + LG+G+ G V F AIK+ ++ S RE LN
Sbjct: 12 KALRDEYIMSKTLGSGACGEVKLA----FERKTCKKVAIKIISKRKFAIGSAREADPALN 67
Query: 172 ---EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSP 228
E ++K + ++K+ + +++ELM GG+L + + + E +
Sbjct: 68 VETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY- 125
Query: 229 PTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVA---DDLTVKVGDFGMTRDIYET 285
QM V YL + +HRDL N +++ +D +K+ DFG ++ + ET
Sbjct: 126 -----FYQMLLAVQ----YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 176
Query: 286 EYYRK--GSRGFLPVRWMAPE---SLKDGVFTSHSDVWSYGVVLW 325
R G+ +L APE S+ + D WS GV+L+
Sbjct: 177 SLMRTLCGTPTYL-----APEVLVSVGTAGYNRAVDCWSLGVILF 216
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 96/225 (42%), Gaps = 35/225 (15%)
Query: 116 EVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANEN----ASEREKAEFLN 171
+ LR + + LG+G+ G V F AIK+ ++ S RE LN
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLA----FERKTCKKVAIKIISKRKFAIGSAREADPALN 61
Query: 172 ---EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSP 228
E ++K + ++K+ + +++ELM GG+L + + + E +
Sbjct: 62 VETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY- 119
Query: 229 PTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVA---DDLTVKVGDFGMTRDIYET 285
QM V YL + +HRDL N +++ +D +K+ DFG ++ + ET
Sbjct: 120 -----FYQMLLAVQ----YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 170
Query: 286 EYYRK--GSRGFLPVRWMAPE---SLKDGVFTSHSDVWSYGVVLW 325
R G+ +L APE S+ + D WS GV+L+
Sbjct: 171 SLMRTLCGTPTYL-----APEVLVSVGTAGYNRAVDCWSLGVILF 210
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 7/114 (6%)
Query: 240 EVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGS-RGFLPV 298
++ G+ Y+ +HRDL N ++ +K+ DFG+ R + + ++ G ++
Sbjct: 132 QILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLAR-VADPDHDHTGFLTEYVAT 190
Query: 299 RWM-APE-SLKDGVFTSHSDVWSYGVVLWEMATLASQP-YQGLSNEQVLNWVKG 349
RW APE L +T D+WS G +L EM L+++P + G LN + G
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEM--LSNRPIFPGKHYLDQLNHILG 242
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 96/225 (42%), Gaps = 35/225 (15%)
Query: 116 EVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANEN----ASEREKAEFLN 171
+ LR + + LG+G+ G V F AIK+ ++ S RE LN
Sbjct: 5 KALRDEYIMSKTLGSGACGEVKLA----FERKTCKKVAIKIISKRKFAIGSAREADPALN 60
Query: 172 ---EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSP 228
E ++K + ++K+ + +++ELM GG+L + + + E +
Sbjct: 61 VETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY- 118
Query: 229 PTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVA---DDLTVKVGDFGMTRDIYET 285
QM V YL + +HRDL N +++ +D +K+ DFG ++ + ET
Sbjct: 119 -----FYQMLLAVQ----YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 169
Query: 286 EYYRK--GSRGFLPVRWMAPE---SLKDGVFTSHSDVWSYGVVLW 325
R G+ +L APE S+ + D WS GV+L+
Sbjct: 170 SLMRTLCGTPTYL-----APEVLVSVGTAGYNRAVDCWSLGVILF 209
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 172 EASVMKAFDTH-HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPT 230
E V + H +V L+ + ++E + GGDL +++ R + P
Sbjct: 102 EKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR--------KLPEE 153
Query: 231 LSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRK 290
+R +AE++ + YL ++ ++RDL N ++ + +K+ D+GM + E R
Sbjct: 154 HARFY--SAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK-----EGLRP 206
Query: 291 G--SRGFLPV-RWMAPESLKDGVFTSHSDVWSYGVVLWEM 327
G + F ++APE L+ + D W+ GV+++EM
Sbjct: 207 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEM 246
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 7/114 (6%)
Query: 240 EVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGS-RGFLPV 298
++ G+ Y+ +HRDL N ++ +K+ DFG+ R + + ++ G ++
Sbjct: 152 QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVAT 210
Query: 299 RWM-APE-SLKDGVFTSHSDVWSYGVVLWEMATLASQP-YQGLSNEQVLNWVKG 349
RW APE L +T D+WS G +L EM L+++P + G LN + G
Sbjct: 211 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEM--LSNRPIFPGKHYLDQLNHILG 262
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 96/225 (42%), Gaps = 35/225 (15%)
Query: 116 EVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANEN----ASEREKAEFLN 171
+ LR + + LG+G+ G V F AIK+ ++ S RE LN
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLA----FERKTCKKVAIKIISKRKFAIGSAREADPALN 61
Query: 172 ---EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSP 228
E ++K + ++K+ + +++ELM GG+L + + + E +
Sbjct: 62 VETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY- 119
Query: 229 PTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVA---DDLTVKVGDFGMTRDIYET 285
QM V YL + +HRDL N +++ +D +K+ DFG ++ + ET
Sbjct: 120 -----FYQMLLAVQ----YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 170
Query: 286 EYYRK--GSRGFLPVRWMAPE---SLKDGVFTSHSDVWSYGVVLW 325
R G+ +L APE S+ + D WS GV+L+
Sbjct: 171 SLMRTLCGTPTYL-----APEVLVSVGTAGYNRAVDCWSLGVILF 210
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 172 EASVMKAFDTH-HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPT 230
E V + H +V L+ + ++E + GGDL +++ R + P
Sbjct: 59 EKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR--------KLPEE 110
Query: 231 LSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRK 290
+R +AE++ + YL ++ ++RDL N ++ + +K+ D+GM + E R
Sbjct: 111 HARFY--SAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK-----EGLRP 163
Query: 291 G--SRGFLPV-RWMAPESLKDGVFTSHSDVWSYGVVLWEM 327
G + F ++APE L+ + D W+ GV+++EM
Sbjct: 164 GDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEM 203
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 7/114 (6%)
Query: 240 EVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGS-RGFLPV 298
++ G+ Y+ +HRDL N ++ +K+ DFG+ R + + ++ G ++
Sbjct: 132 QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVAT 190
Query: 299 RWM-APE-SLKDGVFTSHSDVWSYGVVLWEMATLASQP-YQGLSNEQVLNWVKG 349
RW APE L +T D+WS G +L EM L+++P + G LN + G
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEM--LSNRPIFPGKHYLDQLNHILG 242
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 7/114 (6%)
Query: 240 EVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGS-RGFLPV 298
++ G+ Y+ +HRDL N ++ +K+ DFG+ R + + ++ G ++
Sbjct: 134 QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVAT 192
Query: 299 RWM-APE-SLKDGVFTSHSDVWSYGVVLWEMATLASQP-YQGLSNEQVLNWVKG 349
RW APE L +T D+WS G +L EM L+++P + G LN + G
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEM--LSNRPIFPGKHYLDQLNHILG 244
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 96/225 (42%), Gaps = 35/225 (15%)
Query: 116 EVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANEN----ASEREKAEFLN 171
+ LR + + LG+G+ G V F AIK+ ++ S RE LN
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLA----FERKTCKKVAIKIISKRKFAIGSAREADPALN 61
Query: 172 ---EASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSP 228
E ++K + ++K+ + +++ELM GG+L + + + E +
Sbjct: 62 VETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY- 119
Query: 229 PTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVA---DDLTVKVGDFGMTRDIYET 285
QM V YL + +HRDL N +++ +D +K+ DFG ++ + ET
Sbjct: 120 -----FYQMLLAVQ----YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 170
Query: 286 EYYRK--GSRGFLPVRWMAPE---SLKDGVFTSHSDVWSYGVVLW 325
R G+ +L APE S+ + D WS GV+L+
Sbjct: 171 SLMRTLCGTPTYL-----APEVLVSVGTAGYNRAVDCWSLGVILF 210
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 7/114 (6%)
Query: 240 EVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGS-RGFLPV 298
++ G+ Y+ +HRDL N ++ +K+ DFG+ R + + ++ G ++
Sbjct: 132 QILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFLTEYVAT 190
Query: 299 RWM-APE-SLKDGVFTSHSDVWSYGVVLWEMATLASQP-YQGLSNEQVLNWVKG 349
RW APE L +T D+WS G +L EM L+++P + G LN + G
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEM--LSNRPIFPGKHYLDQLNHILG 242
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 7/114 (6%)
Query: 240 EVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGS-RGFLPV 298
++ G+ Y+ +HRDL N ++ +K+ DFG+ R + + ++ G ++
Sbjct: 140 QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVAT 198
Query: 299 RWM-APE-SLKDGVFTSHSDVWSYGVVLWEMATLASQP-YQGLSNEQVLNWVKG 349
RW APE L +T D+WS G +L EM L+++P + G LN + G
Sbjct: 199 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEM--LSNRPIFPGKHYLDQLNHILG 250
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 7/114 (6%)
Query: 240 EVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGS-RGFLPV 298
++ G+ Y+ +HRDL N ++ +K+ DFG+ R + + ++ G ++
Sbjct: 132 QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVAT 190
Query: 299 RWM-APE-SLKDGVFTSHSDVWSYGVVLWEMATLASQP-YQGLSNEQVLNWVKG 349
RW APE L +T D+WS G +L EM L+++P + G LN + G
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEM--LSNRPIFPGKHYLDQLNHILG 242
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 7/114 (6%)
Query: 240 EVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGS-RGFLPV 298
++ G+ Y+ +HRDL N ++ +K+ DFG+ R + + ++ G ++
Sbjct: 136 QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVAT 194
Query: 299 RWM-APE-SLKDGVFTSHSDVWSYGVVLWEMATLASQP-YQGLSNEQVLNWVKG 349
RW APE L +T D+WS G +L EM L+++P + G LN + G
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEM--LSNRPIFPGKHYLDQLNHILG 246
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 92/212 (43%), Gaps = 20/212 (9%)
Query: 121 KVTILDELGNGS--FGLVYRG-LIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMK 177
K I+D+ S GL G +++ F + A+K+ + R + E AS +
Sbjct: 18 KNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRAS--Q 75
Query: 178 AFDTHHVVKLYGVVSEGNPTL-VIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQ 236
+V +Y + G L ++ME + GG+L + ++ A T+ E S +
Sbjct: 76 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS--------E 127
Query: 237 MAAEVADGMAYLADKKFVHRDLAARNCMVAD---DLTVKVGDFGMTRDIYETEYYRKGSR 293
+ + + + YL HRD+ N + + +K+ DFG ++ T + +
Sbjct: 128 IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET--TSHNSLTTP 185
Query: 294 GFLPVRWMAPESLKDGVFTSHSDVWSYGVVLW 325
+ P ++APE L + D+WS GV+++
Sbjct: 186 CYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMY 216
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 7/114 (6%)
Query: 240 EVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGS-RGFLPV 298
++ G+ Y+ +HRDL N ++ +K+ DFG+ R + + ++ G ++
Sbjct: 132 QILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFLTEYVAT 190
Query: 299 RWM-APE-SLKDGVFTSHSDVWSYGVVLWEMATLASQP-YQGLSNEQVLNWVKG 349
RW APE L +T D+WS G +L EM L+++P + G LN + G
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEM--LSNRPIFPGKHYLDQLNHILG 242
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 97/212 (45%), Gaps = 23/212 (10%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
+GNGSFG+VY+ + D L AIK ++ + + E +M+ D ++V+L
Sbjct: 62 IGNGSFGVVYQAKLCDSGELV----AIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRL 112
Query: 188 -YGVVSEGNPT-LVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
Y S G V + L+ + R R + +++ P + L M ++ +
Sbjct: 113 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYM-YQLFRSL 169
Query: 246 AYLADKKFVHRDLAARNCMVADDLTV-KVGDFGMTRDIYETEYYRKGSRGFLPVRWM-AP 303
AY+ HRD+ +N ++ D V K+ DFG + + E + ++ R+ AP
Sbjct: 170 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----PNVSYICSRYYRAP 225
Query: 304 ESLKDGV-FTSHSDVWSYGVVLWEMATLASQP 334
E + +TS DVWS G VL E+ L QP
Sbjct: 226 ELIFGATDYTSSIDVWSAGCVLAEL--LLGQP 255
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 91/215 (42%), Gaps = 26/215 (12%)
Query: 121 KVTILDELGNGS--FGLVYRG-LIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMK 177
K I+D+ S GL G +++ F + A+K+ + R + E AS
Sbjct: 17 KNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRAS--- 73
Query: 178 AFDTHHVVKLYGVVSE----GNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSR 233
H+V++ V L++ME + GG+L + ++ A T+ E S
Sbjct: 74 --QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS------ 125
Query: 234 ILQMAAEVADGMAYLADKKFVHRDLAARNCMVAD---DLTVKVGDFGMTRDIYETEYYRK 290
++ + + + YL HRD+ N + + +K+ DFG ++ T +
Sbjct: 126 --EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET--TSHNSL 181
Query: 291 GSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLW 325
+ + P ++APE L + D+WS GV+++
Sbjct: 182 TTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMY 215
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 101/231 (43%), Gaps = 46/231 (19%)
Query: 122 VTILDELGNGSFGLVYRG-LIKDFRSLAEHPCAIKVANENASEREKAEFLNEASV--MKA 178
+ +L+ G FG V++ L+ ++ ++ P ++K + NE V +
Sbjct: 26 LQLLEVKARGRFGCVWKAQLLNEYVAVKIFPI-----------QDKQSWQNEYEVYSLPG 74
Query: 179 FDTHHVVKLYGVVSEGNPTLVIMELMGG----GDLKNYLRSCRPDAETDVERSPPTLSRI 234
++++ G G V + L+ G L ++L++ + + + +
Sbjct: 75 MKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKA-----------NVVSWNEL 123
Query: 235 LQMAAEVADGMAYLADK----------KFVHRDLAARNCMVADDLTVKVGDFGMTRDIYE 284
+A +A G+AYL + HRD+ ++N ++ ++LT + DFG+ +E
Sbjct: 124 CHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALK-FE 182
Query: 285 TEYYRKGSRGFLPV-RWMAPESLKDGVFTSHS-----DVWSYGVVLWEMAT 329
+ G + R+MAPE L+ + D+++ G+VLWE+A+
Sbjct: 183 AGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 92/212 (43%), Gaps = 20/212 (9%)
Query: 121 KVTILDELGNGS--FGLVYRG-LIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMK 177
K I+D+ S GL G +++ F + A+K+ + R + E AS +
Sbjct: 10 KNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRAS--Q 67
Query: 178 AFDTHHVVKLYGVVSEGNPTL-VIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQ 236
+V +Y + G L ++ME + GG+L + ++ A T+ E S +
Sbjct: 68 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS--------E 119
Query: 237 MAAEVADGMAYLADKKFVHRDLAARNCMVAD---DLTVKVGDFGMTRDIYETEYYRKGSR 293
+ + + + YL HRD+ N + + +K+ DFG ++ T + +
Sbjct: 120 IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET--TSHNSLTTP 177
Query: 294 GFLPVRWMAPESLKDGVFTSHSDVWSYGVVLW 325
+ P ++APE L + D+WS GV+++
Sbjct: 178 CYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMY 208
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 91/215 (42%), Gaps = 26/215 (12%)
Query: 121 KVTILDELGNGS--FGLVYRG-LIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMK 177
K I+D+ S GL G +++ F + A+K+ + R + E AS
Sbjct: 11 KNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRAS--- 67
Query: 178 AFDTHHVVKLYGVVSE----GNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSR 233
H+V++ V L++ME + GG+L + ++ A T+ E S
Sbjct: 68 --QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS------ 119
Query: 234 ILQMAAEVADGMAYLADKKFVHRDLAARNCMVAD---DLTVKVGDFGMTRDIYETEYYRK 290
++ + + + YL HRD+ N + + +K+ DFG ++ T +
Sbjct: 120 --EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET--TSHNSL 175
Query: 291 GSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLW 325
+ + P ++APE L + D+WS GV+++
Sbjct: 176 TTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMY 209
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 95/220 (43%), Gaps = 39/220 (17%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
+GNGSFG+VY+ + D L AIK ++ + + E +M+ D ++V+L
Sbjct: 62 IGNGSFGVVYQAKLCDSGELV----AIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRL 112
Query: 188 -YGVVSEGNPT-LVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
Y S G V + L+ + R R + +++ P + L M ++ +
Sbjct: 113 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYM-YQLFRSL 169
Query: 246 AYLADKKFVHRDLAARNCMVADDLTV-KVGDFGMTRDIYETE---------YYRKGSRGF 295
AY+ HRD+ +N ++ D V K+ DFG + + E YYR
Sbjct: 170 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR------ 223
Query: 296 LPVRWMAPESLKDGV-FTSHSDVWSYGVVLWEMATLASQP 334
APE + +TS DVWS G VL E+ L QP
Sbjct: 224 ------APELIFGATDYTSSIDVWSAGCVLAEL--LLGQP 255
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 91/215 (42%), Gaps = 26/215 (12%)
Query: 121 KVTILDELGNGS--FGLVYRG-LIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMK 177
K I+D+ S GL G +++ F + A+K+ + R + E AS
Sbjct: 16 KNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRAS--- 72
Query: 178 AFDTHHVVKLYGVVSE----GNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSR 233
H+V++ V L++ME + GG+L + ++ A T+ E S
Sbjct: 73 --QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS------ 124
Query: 234 ILQMAAEVADGMAYLADKKFVHRDLAARNCMVAD---DLTVKVGDFGMTRDIYETEYYRK 290
++ + + + YL HRD+ N + + +K+ DFG ++ T +
Sbjct: 125 --EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET--TSHNSL 180
Query: 291 GSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLW 325
+ + P ++APE L + D+WS GV+++
Sbjct: 181 TTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMY 214
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 87/202 (43%), Gaps = 21/202 (10%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG G G V ++ F + A+K+ + R + E AS + +V +
Sbjct: 26 LGLGINGKV----LQIFNKRTQEKFALKMLQDCPKARREVELHWRAS--QCPHIVRIVDV 79
Query: 188 YGVVSEGNPTL-VIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMA 246
Y + G L ++ME + GG+L + ++ A T+ E S ++ + + +
Sbjct: 80 YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS--------EIMKSIGEAIQ 131
Query: 247 YLADKKFVHRDLAARNCMVAD---DLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAP 303
YL HRD+ N + + +K+ DFG ++ T + + + P ++AP
Sbjct: 132 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET--TSHNSLTTPCYTPY-YVAP 188
Query: 304 ESLKDGVFTSHSDVWSYGVVLW 325
E L + D+WS GV+++
Sbjct: 189 EVLGPEKYDKSCDMWSLGVIMY 210
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 97/212 (45%), Gaps = 23/212 (10%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
+GNGSFG+VY+ + D L AIK ++ + + E +M+ D ++V+L
Sbjct: 64 IGNGSFGVVYQAKLCDSGELV----AIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRL 114
Query: 188 -YGVVSEGNPT-LVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
Y S G V + L+ + R R + +++ P + L M ++ +
Sbjct: 115 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYM-YQLFRSL 171
Query: 246 AYLADKKFVHRDLAARNCMVADDLTV-KVGDFGMTRDIYETEYYRKGSRGFLPVRWM-AP 303
AY+ HRD+ +N ++ D V K+ DFG + + E + ++ R+ AP
Sbjct: 172 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----PNVSYICSRYYRAP 227
Query: 304 ESLKDGV-FTSHSDVWSYGVVLWEMATLASQP 334
E + +TS DVWS G VL E+ L QP
Sbjct: 228 ELIFGATDYTSSIDVWSAGCVLAEL--LLGQP 257
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 101/240 (42%), Gaps = 32/240 (13%)
Query: 121 KVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFD 180
+ T L +G G++G+V + +L + AIK + + L E ++ F
Sbjct: 28 RYTNLSYIGEGAYGMVCSA----YDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 83
Query: 181 THHVVKLYGVVS----EGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQ 236
+++ + ++ E + I++ + DL L++ + I
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND-----------HICY 132
Query: 237 MAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFL 296
++ G+ Y+ +HRDL N ++ +K+ DFG+ R + + ++ GFL
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDH---DHTGFL 188
Query: 297 ----PVRWM-APE-SLKDGVFTSHSDVWSYGVVLWEMATLASQP-YQGLSNEQVLNWVKG 349
RW APE L +T D+WS G +L EM L+++P + G LN + G
Sbjct: 189 XEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM--LSNRPIFPGKHYLDQLNHILG 246
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 101/240 (42%), Gaps = 32/240 (13%)
Query: 121 KVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFD 180
+ T L +G G++G+V + +L + AIK + + L E ++ F
Sbjct: 29 RYTNLSYIGEGAYGMVCSA----YDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 84
Query: 181 THHVVKLYGVVS----EGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQ 236
+++ + ++ E + I++ + DL L++ + I
Sbjct: 85 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND-----------HICY 133
Query: 237 MAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFL 296
++ G+ Y+ +HRDL N ++ +K+ DFG+ R + + ++ GFL
Sbjct: 134 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDH---DHTGFL 189
Query: 297 ----PVRWM-APE-SLKDGVFTSHSDVWSYGVVLWEMATLASQP-YQGLSNEQVLNWVKG 349
RW APE L +T D+WS G +L EM L+++P + G LN + G
Sbjct: 190 XEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM--LSNRPIFPGKHYLDQLNHILG 247
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 91/235 (38%), Gaps = 38/235 (16%)
Query: 114 SWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANEN---ASEREKAEFL 170
S +VL ++ I+D LG G+FG V + D ++ H V N + + R + + L
Sbjct: 8 SGDVLSARYEIVDTLGEGAFGKVVECI--DHKAGGRHVAVKIVKNVDRYCEAARSEIQVL 65
Query: 171 NEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPT 230
+ T V++ ++ EL+G L Y D + P
Sbjct: 66 EHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLG---LSTY------DFIKENGFLPFR 116
Query: 231 LSRILQMAAEVADGMAYLADKKFVHRDLAARNCM-VADDLT------------------V 271
L I +MA ++ + +L K H DL N + V D T +
Sbjct: 117 LDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDI 176
Query: 272 KVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWE 326
KV DFG Y+ E++ S + APE + ++ DVWS G +L E
Sbjct: 177 KVVDFGSA--TYDDEHH---STLVXXRHYRAPEVILALGWSQPCDVWSIGCILIE 226
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 97/212 (45%), Gaps = 23/212 (10%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
+GNGSFG+VY+ + D L AIK ++ + + E +M+ D ++V+L
Sbjct: 66 IGNGSFGVVYQAKLCDSGELV----AIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRL 116
Query: 188 -YGVVSEGNPT-LVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
Y S G V + L+ + R R + +++ P + L M ++ +
Sbjct: 117 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYM-YQLFRSL 173
Query: 246 AYLADKKFVHRDLAARNCMVADDLTV-KVGDFGMTRDIYETEYYRKGSRGFLPVRWM-AP 303
AY+ HRD+ +N ++ D V K+ DFG + + E + ++ R+ AP
Sbjct: 174 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----PNVSYICSRYYRAP 229
Query: 304 ESLKDGV-FTSHSDVWSYGVVLWEMATLASQP 334
E + +TS DVWS G VL E+ L QP
Sbjct: 230 ELIFGATDYTSSIDVWSAGCVLAEL--LLGQP 259
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 91/215 (42%), Gaps = 26/215 (12%)
Query: 121 KVTILDELGNGS--FGLVYRG-LIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMK 177
K I+D+ S GL G +++ F + A+K+ + R + E AS
Sbjct: 56 KNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRAS--- 112
Query: 178 AFDTHHVVKLYGVVSE----GNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSR 233
H+V++ V L++ME + GG+L + ++ A T+ E S
Sbjct: 113 --QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS------ 164
Query: 234 ILQMAAEVADGMAYLADKKFVHRDLAARNCMVAD---DLTVKVGDFGMTRDIYETEYYRK 290
++ + + + YL HRD+ N + + +K+ DFG ++ T +
Sbjct: 165 --EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET--TSHNSL 220
Query: 291 GSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLW 325
+ + P ++APE L + D+WS GV+++
Sbjct: 221 TTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMY 254
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 97/212 (45%), Gaps = 23/212 (10%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
+GNGSFG+VY+ + D L AIK ++ + + E +M+ D ++V+L
Sbjct: 107 IGNGSFGVVYQAKLCDSGELV----AIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRL 157
Query: 188 -YGVVSEGNPT-LVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGM 245
Y S G V + L+ + R R + +++ P + L M ++ +
Sbjct: 158 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYM-YQLFRSL 214
Query: 246 AYLADKKFVHRDLAARNCMVADDLTV-KVGDFGMTRDIYETEYYRKGSRGFLPVRWM-AP 303
AY+ HRD+ +N ++ D V K+ DFG + + E + ++ R+ AP
Sbjct: 215 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----PNVSYICSRYYRAP 270
Query: 304 ESLKDGV-FTSHSDVWSYGVVLWEMATLASQP 334
E + +TS DVWS G VL E+ L QP
Sbjct: 271 ELIFGATDYTSSIDVWSAGCVLAEL--LLGQP 300
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 90/212 (42%), Gaps = 20/212 (9%)
Query: 121 KVTILDELGNGS--FGLVYRG-LIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMK 177
K I+D+ S GL G +++ F + A+K+ + R + E AS +
Sbjct: 10 KNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRAS--Q 67
Query: 178 AFDTHHVVKLYGVVSEGNPTL-VIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQ 236
+V +Y + G L ++ME + GG+L + ++ A T+ E S +
Sbjct: 68 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS--------E 119
Query: 237 MAAEVADGMAYLADKKFVHRDLAARNCMVAD---DLTVKVGDFGMTRDIYETEYYRKGSR 293
+ + + + YL HRD+ N + + +K+ DFG + ET + +
Sbjct: 120 IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTE 176
Query: 294 GFLPVRWMAPESLKDGVFTSHSDVWSYGVVLW 325
++APE L + D+WS GV+++
Sbjct: 177 PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMY 208
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 86/205 (41%), Gaps = 27/205 (13%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG G G V ++ F + A+K+ + R + E AS H+V++
Sbjct: 76 LGLGINGKV----LQIFNKRTQEKFALKMLQDCPKARREVELHWRAS-----QCPHIVRI 126
Query: 188 YGVVSE----GNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
V L++ME + GG+L + ++ A T+ E S ++ + +
Sbjct: 127 VDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS--------EIMKSIGE 178
Query: 244 GMAYLADKKFVHRDLAARNCMVAD---DLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRW 300
+ YL HRD+ N + + +K+ DFG ++ T + + + P +
Sbjct: 179 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET--TSHNSLTTPCYTPY-Y 235
Query: 301 MAPESLKDGVFTSHSDVWSYGVVLW 325
+APE L + D+WS GV+++
Sbjct: 236 VAPEVLGPEKYDKSCDMWSLGVIMY 260
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 86/198 (43%), Gaps = 18/198 (9%)
Query: 133 FGLVYRG-LIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKLYGVV 191
GL G +++ F + A+K+ + R + E AS + +V +Y +
Sbjct: 40 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRAS--QCPHIVRIVDVYENL 97
Query: 192 SEGNPTL-VIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAYLAD 250
G L ++ME + GG+L + ++ A T+ E S ++ + + + YL
Sbjct: 98 YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS--------EIMKSIGEAIQYLHS 149
Query: 251 KKFVHRDLAARNCMVAD---DLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLK 307
HRD+ N + + +K+ DFG ++ T + + + P ++APE L
Sbjct: 150 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET--TSHNSLTTPCYTPY-YVAPEVLG 206
Query: 308 DGVFTSHSDVWSYGVVLW 325
+ D+WS GV+++
Sbjct: 207 PEKYDKSCDMWSLGVIMY 224
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 86/205 (41%), Gaps = 27/205 (13%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG G G V ++ F + A+K+ + R + E AS H+V++
Sbjct: 26 LGLGINGKV----LQIFNKRTQEKFALKMLQDCPKARREVELHWRAS-----QCPHIVRI 76
Query: 188 YGVVSE----GNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
V L++ME + GG+L + ++ A T+ E S ++ + +
Sbjct: 77 VDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS--------EIMKSIGE 128
Query: 244 GMAYLADKKFVHRDLAARNCMVAD---DLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRW 300
+ YL HRD+ N + + +K+ DFG ++ T + + + P +
Sbjct: 129 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET--TSHNSLTTPCYTPY-Y 185
Query: 301 MAPESLKDGVFTSHSDVWSYGVVLW 325
+APE L + D+WS GV+++
Sbjct: 186 VAPEVLGPEKYDKSCDMWSLGVIMY 210
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 91/235 (38%), Gaps = 38/235 (16%)
Query: 114 SWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANEN---ASEREKAEFL 170
S +VL ++ I+D LG G+FG V + D ++ H V N + + R + + L
Sbjct: 8 SGDVLSARYEIVDTLGEGAFGKVVECI--DHKAGGRHVAVKIVKNVDRYCEAARSEIQVL 65
Query: 171 NEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPT 230
+ T V++ ++ EL+G L Y D + P
Sbjct: 66 EHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLG---LSTY------DFIKENGFLPFR 116
Query: 231 LSRILQMAAEVADGMAYLADKKFVHRDLAARNCM-VADDLT------------------V 271
L I +MA ++ + +L K H DL N + V D T +
Sbjct: 117 LDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDI 176
Query: 272 KVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWE 326
KV DFG Y+ E++ S + APE + ++ DVWS G +L E
Sbjct: 177 KVVDFGSA--TYDDEHH---STLVSTRHYRAPEVILALGWSQPCDVWSIGCILIE 226
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 108/258 (41%), Gaps = 37/258 (14%)
Query: 102 MGGDDDKLYKKDSWEVLRSK---VTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVAN 158
+G DDD + E + K +IL ++G+G V++ L + + AIK N
Sbjct: 35 LGTDDDDKASSSANECISVKGRIYSILKQIGSGGSSKVFQVL-----NEKKQIYAIKYVN 89
Query: 159 -ENASEREKAEFLNEASVMKAFDTH--HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRS 215
E A + + NE + + H +++LY ++ME G DL ++L+
Sbjct: 90 LEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKK 148
Query: 216 CRPDAETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGD 275
+ D +L+ + + VH DL N ++ D + +K+ D
Sbjct: 149 KK---SIDPWERKSYWKNMLE-------AVHTIHQHGIVHSDLKPANFLIVDGM-LKLID 197
Query: 276 FGMTRDIY-ETEYYRKGSRGFLPVRWMAPESLKDGVFTSHS-----------DVWSYGVV 323
FG+ + +T K S+ V +M PE++KD + + DVWS G +
Sbjct: 198 FGIANQMQPDTTSVVKDSQ-VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCI 256
Query: 324 LWEMATLASQPYQGLSNE 341
L+ M T P+Q + N+
Sbjct: 257 LYYM-TYGKTPFQQIINQ 273
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 54/255 (21%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVAN---ENASEREKAEF 169
DS + + L +G+G+ G+V F ++ A+K + +N + ++A
Sbjct: 15 DSTFTVLKRYQQLKPIGSGAQGIVCAA----FDTVLGINVAVKKLSRPFQNQTHAKRA-- 68
Query: 170 LNEASVMKAFDTHHVVKLYGVVS------EGNPTLVIMELMGGGDLKNYLRSCRP-DAET 222
E ++K + +++ L V + E ++MELM C+ E
Sbjct: 69 YRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-------LCQVIHMEL 121
Query: 223 DVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDI 282
D ER L ++L G+ +L +HRDL N +V D T+K+ DFG+ R
Sbjct: 122 DHERMSYLLYQMLC-------GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 174
Query: 283 YE---------TEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQ 333
T YYR APE + + + D+WS G ++ E+ S
Sbjct: 175 STNFMMTPYVVTRYYR------------APEVILGMGYKENVDIWSVGCIMGELVK-GSV 221
Query: 334 PYQGLSNEQVLNWVK 348
+QG + + W K
Sbjct: 222 IFQG--TDHIDQWNK 234
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 88/211 (41%), Gaps = 36/211 (17%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASERE-KAEFLNEASVMKAFDTHHVVK 186
+G GS+G+V + KD + AIK E+ ++ K + E ++K ++V
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIV----AIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVN 88
Query: 187 LYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSR--ILQMAAEVADG 244
L V + ++ E + L D+E P L + + ++ +G
Sbjct: 89 LLEVCKKKKRWYLVFEFVDHTIL------------DDLELFPNGLDYQVVQKYLFQIING 136
Query: 245 MAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTR------DIYETEYYRKGSRGFLPV 298
+ + +HRD+ N +V+ VK+ DFG R ++Y+ E +
Sbjct: 137 IGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDE---------VAT 187
Query: 299 RWM-APESL-KDGVFTSHSDVWSYGVVLWEM 327
RW APE L D + DVW+ G ++ EM
Sbjct: 188 RWYRAPELLVGDVKYGKAVDVWAIGCLVTEM 218
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 107/266 (40%), Gaps = 38/266 (14%)
Query: 104 GDDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASE 163
G D + + E+ ++ + L G F VY +D S E+ A+K N E
Sbjct: 12 GRDQSDFVGQTVELGELRLRVRRVLAEGGFAFVYEA--QDVGSGREY--ALKRLLSNEEE 67
Query: 164 REKAEFLNEASVMKAFDTH-HVVKLYGVVS-------EGNPTLVIMELMGGGDLKNYLRS 215
+ +A + E MK H ++V+ S G +++ + G L +L+
Sbjct: 68 KNRA-IIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKK 126
Query: 216 CRPDAETDVERSPPTLSRILQMAAEVADGMAYLADKK--FVHRDLAARNCMVADDLTVKV 273
R P + +L++ + + ++ +K +HRDL N ++++ T+K+
Sbjct: 127 ME-------SRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKL 179
Query: 274 GDFGMTRDI-----YETEYYRKG------SRGFLPVRWMAPESL---KDGVFTSHSDVWS 319
DFG I Y R+ +R P+ + PE + + D+W+
Sbjct: 180 CDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPM-YRTPEIIDLYSNFPIGEKQDIWA 238
Query: 320 YGVVLWEMATLASQPYQGLSNEQVLN 345
G +L+ + P++ + +++N
Sbjct: 239 LGCILY-LLCFRQHPFEDGAKLRIVN 263
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/225 (19%), Positives = 91/225 (40%), Gaps = 41/225 (18%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTHHVVKL 187
LG G+FG V +K +L AIK +E + + L+E ++ + + +VV+
Sbjct: 14 LGQGAFGQV----VKARNALDSRYYAIKKIRH--TEEKLSTILSEVXLLASLNHQYVVRY 67
Query: 188 YGV-------------VSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRI 234
Y V + + + E L + + S + + D
Sbjct: 68 YAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRD---------EY 118
Query: 235 LQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRG 294
++ ++ + ++Y+ + +HR+L N + + VK+GDFG+ ++++ + K
Sbjct: 119 WRLFRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 295 FLP------------VRWMAPESLK-DGVFTSHSDVWSYGVVLWE 326
LP ++A E L G + D +S G++ +E
Sbjct: 179 NLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE 223
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 99/241 (41%), Gaps = 55/241 (22%)
Query: 117 VLRSKVTILDELGNGSFGLVYRG-LIKDFRSLAEHPCAIKVANENASEREKAEFLNEASV 175
V R + +L+ G FG V++ L+ DF ++ P ++K + +E +
Sbjct: 12 VPRGSLQLLEIKARGRFGCVWKAQLMNDFVAVKIFPL-----------QDKQSWQSEREI 60
Query: 176 MKAFDTHHVVKLYGVVSEGNPTLVIMEL------MGGGDLKNYLRSCRPDAETDVERSPP 229
H L + +E + + +EL G L +YL+ +
Sbjct: 61 FSTPGMKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLKG-----------NII 109
Query: 230 TLSRILQMAAEVADGMAYLADK-----------KFVHRDLAARNCMVADDLTVKVGDFGM 278
T + + +A ++ G++YL + HRD ++N ++ DLT + DFG+
Sbjct: 110 TWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGL 169
Query: 279 TRDIYETE-----YYRKGSRGFLPVRWMAPESLKDGVFTSHS-----DVWSYGVVLWEMA 328
+ + + G+R R+MAPE L+ + D+++ G+VLWE+
Sbjct: 170 AVRFEPGKPPGDTHGQVGTR-----RYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELV 224
Query: 329 T 329
+
Sbjct: 225 S 225
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 108/258 (41%), Gaps = 37/258 (14%)
Query: 102 MGGDDDKLYKKDSWEVLRSK---VTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVAN 158
+G DDD + E + K +IL ++G+G V++ L + + AIK N
Sbjct: 35 LGTDDDDKASSSANECISVKGRIYSILKQIGSGGSSKVFQVL-----NEKKQIYAIKYVN 89
Query: 159 -ENASEREKAEFLNEASVMKAFDTH--HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRS 215
E A + + NE + + H +++LY ++ME G DL ++L+
Sbjct: 90 LEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKK 148
Query: 216 CRPDAETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGD 275
+ D +L+ + + VH DL N ++ D + +K+ D
Sbjct: 149 KK---SIDPWERKSYWKNMLE-------AVHTIHQHGIVHSDLKPANFLIVDGM-LKLID 197
Query: 276 FGMTRDIY-ETEYYRKGSRGFLPVRWMAPESLKDGVFTSHS-----------DVWSYGVV 323
FG+ + +T K S+ V +M PE++KD + + DVWS G +
Sbjct: 198 FGIANQMQPDTTSVVKDSQ-VGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCI 256
Query: 324 LWEMATLASQPYQGLSNE 341
L+ M T P+Q + N+
Sbjct: 257 LYYM-TYGKTPFQQIINQ 273
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 108/258 (41%), Gaps = 37/258 (14%)
Query: 102 MGGDDDKLYKKDSWEVLRSK---VTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVAN 158
+G DDD + E + K +IL ++G+G V++ L + + AIK N
Sbjct: 35 LGTDDDDKASSSANECISVKGRIYSILKQIGSGGSSKVFQVL-----NEKKQIYAIKYVN 89
Query: 159 -ENASEREKAEFLNEASVMKAFDTH--HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRS 215
E A + + NE + + H +++LY ++ME G DL ++L+
Sbjct: 90 LEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKK 148
Query: 216 CRPDAETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGD 275
+ D +L+ + + VH DL N ++ D + +K+ D
Sbjct: 149 KK---SIDPWERKSYWKNMLE-------AVHTIHQHGIVHSDLKPANFLIVDGM-LKLID 197
Query: 276 FGMTRDIY-ETEYYRKGSRGFLPVRWMAPESLKDGVFTSHS-----------DVWSYGVV 323
FG+ + +T K S+ V +M PE++KD + + DVWS G +
Sbjct: 198 FGIANQMQPDTTSVVKDSQ-VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCI 256
Query: 324 LWEMATLASQPYQGLSNE 341
L+ M T P+Q + N+
Sbjct: 257 LYYM-TYGKTPFQQIINQ 273
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/229 (19%), Positives = 98/229 (42%), Gaps = 21/229 (9%)
Query: 118 LRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMK 177
L K I ++LG G FG+V+R + + ++ K +++ + E S++
Sbjct: 3 LYEKYMIAEDLGRGEFGIVHRCV----ETSSKKTYMAKFVKVKGTDQVLVK--KEISILN 56
Query: 178 AFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQM 237
+++ L+ ++I E + G D+ + + + ER I+
Sbjct: 57 IARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELN---ERE------IVSY 107
Query: 238 AAEVADGMAYLADKKFVHRDLAARNCMVAD--DLTVKVGDFGMTRDIYETEYYRKGSRGF 295
+V + + +L H D+ N + T+K+ +FG R + + +R F
Sbjct: 108 VHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFR---LLF 164
Query: 296 LPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQVL 344
+ APE + V ++ +D+WS G +++ + + P+ +N+Q++
Sbjct: 165 TAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLS-GINPFLAETNQQII 212
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 56/124 (45%), Gaps = 28/124 (22%)
Query: 235 LQMAAEVADGMAYLADKKFVHRDLAARNCMV-------------ADDLTVKVGDFGMTRD 281
+ + ++A G+A+L K +HRDL +N +V A++L + + DFG+ +
Sbjct: 136 ISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK 195
Query: 282 IYETEYYRK-------GSRGFLPVRWMAPESLKDGV---FTSHSDVWSYGVVLWEMATLA 331
+ + + G+ G W APE L++ T D++S G V + + +
Sbjct: 196 LDSGQXXFRXNLNNPSGTSG-----WRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKG 250
Query: 332 SQPY 335
P+
Sbjct: 251 KHPF 254
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 56/124 (45%), Gaps = 28/124 (22%)
Query: 235 LQMAAEVADGMAYLADKKFVHRDLAARNCMV-------------ADDLTVKVGDFGMTRD 281
+ + ++A G+A+L K +HRDL +N +V A++L + + DFG+ +
Sbjct: 136 ISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK 195
Query: 282 IYETEYYRK-------GSRGFLPVRWMAPESLKDGV---FTSHSDVWSYGVVLWEMATLA 331
+ + + G+ G W APE L++ T D++S G V + + +
Sbjct: 196 LDSGQXXFRXNLNNPSGTSG-----WRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKG 250
Query: 332 SQPY 335
P+
Sbjct: 251 KHPF 254
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 94/233 (40%), Gaps = 32/233 (13%)
Query: 123 TILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVAN-ENASEREKAEFLNEASVMKAFDT 181
+IL ++G+G V++ L + + AIK N E A + + NE + +
Sbjct: 31 SILKQIGSGGSSKVFQVL-----NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ 85
Query: 182 H--HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAA 239
H +++LY ++ME G DL ++L+ + D +L+
Sbjct: 86 HSDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKK---SIDPWERKSYWKNMLE--- 138
Query: 240 EVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVR 299
+ + VH DL N ++ D + +K+ DFG+ + V
Sbjct: 139 ----AVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDXXXVVKDSQVGTVN 193
Query: 300 WMAPESLKDGVFTSHS-----------DVWSYGVVLWEMATLASQPYQGLSNE 341
+M PE++KD + + DVWS G +L+ M T P+Q + N+
Sbjct: 194 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYM-TYGKTPFQQIINQ 245
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 78/195 (40%), Gaps = 16/195 (8%)
Query: 146 SLAEHPCAIKVANENASERE--KAEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMEL 203
++ E A+K+ +E S + EA HVV ++ V L
Sbjct: 56 TVRERIVALKLXSETLSSDPVFRTRXQREARTAGRLQEPHVVPIHDFGEIDGQLYVDXRL 115
Query: 204 MGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNC 263
+ G DL LR P A PP R + + ++ + HRD+ N
Sbjct: 116 INGVDLAAXLRRQGPLA-------PP---RAVAIVRQIGSALDAAHAAGATHRDVKPENI 165
Query: 264 MVADDLTVKVGDFGMTRDIYETEYYRKGSR-GFLPVRWMAPESLKDGVFTSHSDVWSYGV 322
+V+ D + DFG+ + + + G+ G L + APE + T +D+++
Sbjct: 166 LVSADDFAYLVDFGIASATTDEKLTQLGNTVGTL--YYXAPERFSESHATYRADIYALTC 223
Query: 323 VLWEMATLASQPYQG 337
VL+E T S PYQG
Sbjct: 224 VLYECLT-GSPPYQG 237
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 100/234 (42%), Gaps = 34/234 (14%)
Query: 123 TILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVAN-ENASEREKAEFLNEASVMKAFDT 181
+IL ++G+G V++ L + + AIK N E A + + NE + +
Sbjct: 15 SILKQIGSGGSSKVFQVL-----NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ 69
Query: 182 H--HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAA 239
H +++LY ++ME G DL ++L+ + + ER
Sbjct: 70 HSDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLK--KKKSIDPWERK--------SYWK 118
Query: 240 EVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIY-ETEYYRKGSRGFLPV 298
+ + + + VH DL N ++ D + +K+ DFG+ + +T K S+ V
Sbjct: 119 NMLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQ-VGTV 176
Query: 299 RWMAPESLKDGVFTSHS-----------DVWSYGVVLWEMATLASQPYQGLSNE 341
+M PE++KD + + DVWS G +L+ M T P+Q + N+
Sbjct: 177 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYM-TYGKTPFQQIINQ 229
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 100/234 (42%), Gaps = 34/234 (14%)
Query: 123 TILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVAN-ENASEREKAEFLNEASVMKAFDT 181
+IL ++G+G V++ L + + AIK N E A + + NE + +
Sbjct: 11 SILKQIGSGGSSKVFQVL-----NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ 65
Query: 182 H--HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAA 239
H +++LY ++ME G DL ++L+ + + ER
Sbjct: 66 HSDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLK--KKKSIDPWERK--------SYWK 114
Query: 240 EVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIY-ETEYYRKGSRGFLPV 298
+ + + + VH DL N ++ D + +K+ DFG+ + +T K S+ V
Sbjct: 115 NMLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQ-VGTV 172
Query: 299 RWMAPESLKDGVFTSHS-----------DVWSYGVVLWEMATLASQPYQGLSNE 341
+M PE++KD + + DVWS G +L+ M T P+Q + N+
Sbjct: 173 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYM-TYGKTPFQQIINQ 225
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 99/234 (42%), Gaps = 34/234 (14%)
Query: 123 TILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVAN-ENASEREKAEFLNEASVMKAFDT 181
+IL ++G+G V++ L + + AIK N E A + + NE + +
Sbjct: 31 SILKQIGSGGSSKVFQVL-----NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ 85
Query: 182 H--HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAA 239
H +++LY ++ME G DL ++L+ + D +L+
Sbjct: 86 HSDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKK---SIDPWERKSYWKNMLE--- 138
Query: 240 EVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIY-ETEYYRKGSRGFLPV 298
+ + VH DL N ++ D + +K+ DFG+ + +T K S+ V
Sbjct: 139 ----AVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQ-VGTV 192
Query: 299 RWMAPESLKDGVFTSHS-----------DVWSYGVVLWEMATLASQPYQGLSNE 341
+M PE++KD + + DVWS G +L+ M T P+Q + N+
Sbjct: 193 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYM-TYGKTPFQQIINQ 245
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 26/206 (12%)
Query: 127 ELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENAS--EREKAEFLNEASVMKAFDTHHV 184
++G+G+FG+ L++D L + A+K A+ E + E +N S+ ++
Sbjct: 27 DIGSGNFGVAR--LMRD--KLTKELVAVKYIERGAAIDENVQREIINHRSLRHP----NI 78
Query: 185 VKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADG 244
V+ V+ +IME GG+L Y R C ++ E +R ++ G
Sbjct: 79 VRFKEVILTPTHLAIIMEYASGGEL--YERICNAGRFSEDE------ARFF--FQQLLSG 128
Query: 245 MAYLADKKFVHRDLAARNCMV--ADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMA 302
++Y + HRDL N ++ + +K+ DFG ++ + + S P ++A
Sbjct: 129 VSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKS--SVLHSQPKSTVGTPA-YIA 185
Query: 303 PESLKDGVFTSH-SDVWSYGVVLWEM 327
PE L + +DVWS GV L+ M
Sbjct: 186 PEVLLRQEYDGKIADVWSCGVTLYVM 211
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 16/132 (12%)
Query: 240 EVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIY-----ETEYYRKGSRG 294
++ DG+ YL + VH+D+ N ++ T+K+ G+ ++ +T +GS
Sbjct: 117 QLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPA 176
Query: 295 FLPVRWMAPESLKDGVFTSHS---DVWSYGVVLWEMATLASQPYQGLSNEQVL-NWVKGK 350
F P PE + +G+ T D+WS GV L+ + T P++G + ++ N KG
Sbjct: 177 FQP-----PE-IANGLDTFSGFKVDIWSAGVTLYNITT-GLYPFEGDNIYKLFENIGKGS 229
Query: 351 SSNEYKVNPPIS 362
+ PP+S
Sbjct: 230 YAIPGDCGPPLS 241
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 100/234 (42%), Gaps = 34/234 (14%)
Query: 123 TILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVAN-ENASEREKAEFLNEASVMKAFDT 181
+IL ++G+G V++ L + + AIK N E A + + NE + +
Sbjct: 12 SILKQIGSGGSSKVFQVL-----NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ 66
Query: 182 H--HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAA 239
H +++LY ++ME G DL ++L+ + + ER
Sbjct: 67 HSDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLK--KKKSIDPWERK--------SYWK 115
Query: 240 EVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIY-ETEYYRKGSRGFLPV 298
+ + + + VH DL N ++ D + +K+ DFG+ + +T K S+ V
Sbjct: 116 NMLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQ-VGTV 173
Query: 299 RWMAPESLKDGVFTSHS-----------DVWSYGVVLWEMATLASQPYQGLSNE 341
+M PE++KD + + DVWS G +L+ M T P+Q + N+
Sbjct: 174 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYM-TYGKTPFQQIINQ 226
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 84/190 (44%), Gaps = 25/190 (13%)
Query: 162 SEREKAEFLNEASVMKAFDTHHVVKLYGVVSEG---NPTLVIMELMGGGDLKNYLRSCRP 218
S R+ +F E ++ F +V+ + G +PTL I G L N L
Sbjct: 47 STRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTL-ITHWXPYGSLYNVLHE--- 102
Query: 219 DAETDVERSPPTLSRILQMAAEVADGMAYLAD-KKFVHRD-LAARNCMVADDLTVKVGDF 276
V++S + ++ A + A G A+L + + R L +R+ + +D T ++
Sbjct: 103 GTNFVVDQS-----QAVKFALDXARGXAFLHTLEPLIPRHALNSRSVXIDEDXTARISXA 157
Query: 277 GMTRDIYETEYYRKGSRGFLPVRWMAPESLK---DGVFTSHSDVWSYGVVLWEMATLASQ 333
+ ++ R + P W+APE+L+ + +D WS+ V+LWE+ T
Sbjct: 158 DVKFS------FQSPGRXYAPA-WVAPEALQKKPEDTNRRSADXWSFAVLLWELVT-REV 209
Query: 334 PYQGLSNEQV 343
P+ LSN ++
Sbjct: 210 PFADLSNXEI 219
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 109/243 (44%), Gaps = 42/243 (17%)
Query: 126 DELGNGSFG-LVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASVMKAFDTH-H 183
D LG+G+ G +VYRG+ D R +A ++ E S ++ E +++ D H +
Sbjct: 30 DVLGHGAEGTIVYRGMF-DNRDVA----VKRILPECFSFADR-----EVQLLRESDEHPN 79
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
V++ + + + +EL L+ Y+ + A +E P TL LQ +
Sbjct: 80 VIRYFCTEKDRQFQYIAIELCAAT-LQEYVEQ-KDFAHLGLE--PITL---LQ---QTTS 129
Query: 244 GMAYLADKKFVHRDLAARNCMVA-----DDLTVKVGDFGMTRDIY--ETEYYRK----GS 292
G+A+L VHRDL N +++ + + DFG+ + + + R+ G+
Sbjct: 130 GLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGT 189
Query: 293 RGFLPVRWMAPESLKDGVF---TSHSDVWSYGVVLWEMATLASQPYQGLSNEQVLNWVKG 349
G W+APE L + T D++S G V + + + S P+ G S ++ N + G
Sbjct: 190 EG-----WIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPF-GKSLQRQANILLG 243
Query: 350 KSS 352
S
Sbjct: 244 ACS 246
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 58/131 (44%), Gaps = 14/131 (10%)
Query: 198 LVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRD 257
L++ E + GG+L + ++ A T+ E S ++ + + + YL HRD
Sbjct: 135 LIVXECLDGGELFSRIQDRGDQAFTEREAS--------EIXKSIGEAIQYLHSINIAHRD 186
Query: 258 LAARNCMVAD---DLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSH 314
+ N + + +K+ DFG ++ T + + + P ++APE L +
Sbjct: 187 VKPENLLYTSKRPNAILKLTDFGFAKET--TSHNSLTTPCYTPY-YVAPEVLGPEKYDKS 243
Query: 315 SDVWSYGVVLW 325
D WS GV+ +
Sbjct: 244 CDXWSLGVIXY 254
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 92/223 (41%), Gaps = 18/223 (8%)
Query: 113 DSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNE 172
+++EV + + ELG G++G+V K + A+K + +E+ L +
Sbjct: 27 ENFEVKADDLEPIXELGRGAYGVVE----KXRHVPSGQIXAVKRIRATVNSQEQKRLLXD 82
Query: 173 ASV-MKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTL 231
+ + D V YG + + EL K Y + +++
Sbjct: 83 LDISXRTVDCPFTVTFYGALFREGDVWICXELXDTSLDKFYKQV--------IDKGQTIP 134
Query: 232 SRIL-QMAAEVADGMAYLADK-KFVHRDLAARNCMVADDLTVKVGDFGMTRDIYE--TEY 287
IL ++A + + +L K +HRD+ N ++ VK DFG++ + + +
Sbjct: 135 EDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKD 194
Query: 288 YRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMATL 330
G + + + PE + G ++ SD+WS G+ E+A L
Sbjct: 195 IDAGCKPYXAPERINPELNQKG-YSVKSDIWSLGITXIELAIL 236
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 14/104 (13%)
Query: 245 MAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPV-----R 299
+A+L + VH D+ N + K+GDFG+ ++ G+ G V R
Sbjct: 170 LAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVEL--------GTAGAGEVQEGDPR 221
Query: 300 WMAPESLKDGVFTSHSDVWSYGVVLWEMATLASQPYQGLSNEQV 343
+MAPE L+ G + + +DV+S G+ + E+A P+ G +Q+
Sbjct: 222 YMAPELLQ-GSYGTAADVFSLGLTILEVACNMELPHGGEGWQQL 264
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 56/128 (43%), Gaps = 32/128 (25%)
Query: 235 LQMAAEVADGMAYLADKKFVHRDLAARNCMV-------------ADDLTVKVGDFGMTRD 281
+ + ++A G+A+L K +HRDL +N +V A++L + + DFG+ +
Sbjct: 118 ISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK 177
Query: 282 IYETEYYRK-------GSRGFLPVRWMAPESLKDG-------VFTSHSDVWSYGVVLWEM 327
+ + + G+ G W APE L++ T D++S G V + +
Sbjct: 178 LDSGQXXFRXNLNNPSGTSG-----WRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYI 232
Query: 328 ATLASQPY 335
+ P+
Sbjct: 233 LSKGKHPF 240
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 32/222 (14%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPC----AIKVANENASEREKAEFLNEASVMKAF 179
+L LG G++G V+ R ++ H A+KV + A+ +KA+ +
Sbjct: 58 LLKVLGTGAYGKVFL-----VRKISGHDTGKLYAMKVLKK-ATIVQKAKTTEHTRTERQV 111
Query: 180 DTH-----HVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRI 234
H +V L+ +I++ + GG+L +L +R T +
Sbjct: 112 LEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLS----------QRERFTEHEV 161
Query: 235 LQMAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRG 294
E+ + +L ++RD+ N ++ + V + DFG++++ E R +
Sbjct: 162 QIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETER--AYD 219
Query: 295 FL-PVRWMAPESLKDGVFTSHS---DVWSYGVVLWEMATLAS 332
F + +MAP+ ++ G + H D WS GV+++E+ T AS
Sbjct: 220 FCGTIEYMAPDIVRGGD-SGHDKAVDWWSLGVLMYELLTGAS 260
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 94/216 (43%), Gaps = 38/216 (17%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASV-------MKAFD 180
+G GSFG V +K + + + AIK+ + K FLN+A + M D
Sbjct: 62 IGKGSFGQV----VKAYDRVEQEWVAIKII------KNKKAFLNQAQIEVRLLELMNKHD 111
Query: 181 T---HHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQM 237
T +++V L N ++ E++ +L + LR+ T+ L+R +
Sbjct: 112 TEMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRN------TNFRGVSLNLTR--KF 162
Query: 238 AAEVADGMAYLADKKF--VHRDLAARNCMVADD--LTVKVGDFGMTRDIYETEYYRKGSR 293
A ++ + +LA + +H DL N ++ + +K+ DFG + + + Y SR
Sbjct: 163 AQQMCTALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIYQXIQSR 222
Query: 294 GFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
+ +PE L + D+WS G +L EM T
Sbjct: 223 FY-----RSPEVLLGMPYDLAIDMWSLGCILVEMHT 253
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 55/123 (44%), Gaps = 22/123 (17%)
Query: 235 LQMAAEVADGMAYLADKKFVHRDLAARNCMV-------------ADDLTVKVGDFGMTR- 280
+ + ++A G+A+L K +HRDL +N +V A++L + + DFG+ +
Sbjct: 118 ISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK 177
Query: 281 -DIYETEYYRKGSRGFLPVRWMAPESLKDG-------VFTSHSDVWSYGVVLWEMATLAS 332
D ++ + + W APE L++ T D++S G V + + +
Sbjct: 178 LDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGK 237
Query: 333 QPY 335
P+
Sbjct: 238 HPF 240
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 93/247 (37%), Gaps = 63/247 (25%)
Query: 116 EVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASV 175
VLR K ++ +LG G++G+V++ + R E K+ + F N
Sbjct: 6 HVLR-KYELVKKLGKGAYGIVWKSI---DRRTGEVVAVKKIFDA---------FQNSTDA 52
Query: 176 MKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDV---------ER 226
+ F +++ EL G ++ N L R D + DV +
Sbjct: 53 QRTF---------------REIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMETDL 97
Query: 227 SPPTLSRILQ------MAAEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTR 280
+ IL+ + ++ + YL +HRD+ N ++ + VKV DFG++R
Sbjct: 98 HAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSR 157
Query: 281 DIY---------------ETEYYRKGS---RGFLPVRWM-APESLKDGV-FTSHSDVWSY 320
TE + ++ RW APE L +T D+WS
Sbjct: 158 SFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSL 217
Query: 321 GVVLWEM 327
G +L E+
Sbjct: 218 GCILGEI 224
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 94/216 (43%), Gaps = 38/216 (17%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASV-------MKAFD 180
+G GSFG V +K + + + AIK+ + K FLN+A + M D
Sbjct: 62 IGKGSFGQV----VKAYDRVEQEWVAIKII------KNKKAFLNQAQIEVRLLELMNKHD 111
Query: 181 T---HHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQM 237
T +++V L N ++ E++ +L + LR+ T+ L+R +
Sbjct: 112 TEMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRN------TNFRGVSLNLTR--KF 162
Query: 238 AAEVADGMAYLADKKF--VHRDLAARNCMVADDL--TVKVGDFGMTRDIYETEYYRKGSR 293
A ++ + +LA + +H DL N ++ + +K+ DFG + + + Y SR
Sbjct: 163 AQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSR 222
Query: 294 GFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
+ +PE L + D+WS G +L EM T
Sbjct: 223 FY-----RSPEVLLGMPYDLAIDMWSLGCILVEMHT 253
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 100/224 (44%), Gaps = 33/224 (14%)
Query: 109 LYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVAN--ENASEREK 166
++ D +E+++ ++G+G+FG+ L++D +S A+K E E K
Sbjct: 14 MHDSDRYELVK-------DIGSGNFGVAR--LMRDKQS--NELVAVKYIERGEKIDENVK 62
Query: 167 AEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVER 226
E +N S+ ++V+ V+ ++ME GG+L + R C ++ E
Sbjct: 63 REIINHRSLRHP----NIVRFKEVILTPTHLAIVMEYASGGEL--FERICNAGRFSEDE- 115
Query: 227 SPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMV--ADDLTVKVGDFGMTRDIYE 284
+R ++ G++Y + HRDL N ++ + +K+ DFG ++
Sbjct: 116 -----ARFF--FQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKS--S 166
Query: 285 TEYYRKGSRGFLPVRWMAPESLKDGVFTSH-SDVWSYGVVLWEM 327
+ + S P ++APE L + +DVWS GV L+ M
Sbjct: 167 VLHSQPKSTVGTPA-YIAPEVLLKKEYDGKVADVWSCGVTLYVM 209
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 244 GMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWM-A 302
G+ L + VHRDL N ++AD+ + + DF + R+ + ++ RW A
Sbjct: 146 GLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLARE----DTADANKTHYVTHRWYRA 201
Query: 303 PE-SLKDGVFTSHSDVWSYGVVLWEM 327
PE ++ FT D+WS G V+ EM
Sbjct: 202 PELVMQFKGFTKLVDMWSAGCVMAEM 227
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 98/224 (43%), Gaps = 33/224 (14%)
Query: 109 LYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVAN--ENASEREK 166
++ D +E+++ ++G G+FG+ L++D + A A+K E E K
Sbjct: 15 MHDSDRYELVK-------DIGAGNFGVAR--LMRDKQ--ANELVAVKYIERGEKIDENVK 63
Query: 167 AEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVER 226
E +N S+ ++V+ V+ ++ME GG+L + R C ++ E
Sbjct: 64 REIINHRSLRHP----NIVRFKEVILTPTHLAIVMEYASGGEL--FERICNAGRFSEDE- 116
Query: 227 SPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMV--ADDLTVKVGDFGMTRDIYE 284
+R ++ G++Y + HRDL N ++ + +K+ DFG ++
Sbjct: 117 -----ARFF--FQQLISGVSYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSK---A 166
Query: 285 TEYYRKGSRGFLPVRWMAPESLKDGVFTSH-SDVWSYGVVLWEM 327
+ + + ++APE L + +DVWS GV L+ M
Sbjct: 167 SVLHSQPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVM 210
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 244 GMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPVRWM-A 302
G+ L + VHRDL N ++AD+ + + DF + R+ + ++ RW A
Sbjct: 146 GLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLARE----DTADANKTHYVTHRWYRA 201
Query: 303 PE-SLKDGVFTSHSDVWSYGVVLWEM 327
PE ++ FT D+WS G V+ EM
Sbjct: 202 PELVMQFKGFTKLVDMWSAGCVMAEM 227
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 94/216 (43%), Gaps = 38/216 (17%)
Query: 128 LGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEFLNEASV-------MKAFD 180
+G GSFG V +K + + + AIK+ + K FLN+A + M D
Sbjct: 43 IGKGSFGQV----VKAYDRVEQEWVAIKII------KNKKAFLNQAQIEVRLLELMNKHD 92
Query: 181 T---HHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQM 237
T +++V L N ++ E++ +L + LR+ T+ L+R +
Sbjct: 93 TEMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRN------TNFRGVSLNLTR--KF 143
Query: 238 AAEVADGMAYLADKKF--VHRDLAARNCMVADDL--TVKVGDFGMTRDIYETEYYRKGSR 293
A ++ + +LA + +H DL N ++ + +K+ DFG + + + Y SR
Sbjct: 144 AQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSR 203
Query: 294 GFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
+ +PE L + D+WS G +L EM T
Sbjct: 204 FY-----RSPEVLLGMPYDLAIDMWSLGCILVEMHT 234
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 8/117 (6%)
Query: 214 RSCRPDAETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVAD-DLTVK 272
R CR V PP L ++ + G +L HRD+ N +V + D T+K
Sbjct: 114 RCCRNYYRRQVA-PPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLK 172
Query: 273 VGDFGMTRDIYETEYYRKGSRGFLPVRWM-APESL-KDGVFTSHSDVWSYGVVLWEM 327
+ DFG + + +E + ++ R+ APE + + +T+ D+WS G + EM
Sbjct: 173 LCDFGSAKKLSPSE----PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEM 225
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 90/209 (43%), Gaps = 23/209 (11%)
Query: 125 LDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANEN-ASEREKAEFLNEASVMKAFDTHH 183
LD LG G F VY+ K+ + IK+ + + A + L E +++ +
Sbjct: 15 LDFLGEGQFATVYKARDKNTNQIVAIK-KIKLGHRSEAKDGINRTALREIKLLQELSHPN 73
Query: 184 VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMAAEVAD 243
++ L + ++ + M DL+ ++ + + +P + + M +
Sbjct: 74 IIGLLDAFGHKSNISLVFDFMET-DLEVIIK------DNSLVLTPSHIKAYMLMTLQ--- 123
Query: 244 GMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGF---LPVRW 300
G+ YL +HRDL N ++ ++ +K+ DFG+ + + +R + + RW
Sbjct: 124 GLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKS------FGSPNRAYXHQVVTRW 177
Query: 301 M-APESLKDG-VFTSHSDVWSYGVVLWEM 327
APE L ++ D+W+ G +L E+
Sbjct: 178 YRAPELLFGARMYGVGVDMWAVGCILAEL 206
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 100/224 (44%), Gaps = 33/224 (14%)
Query: 109 LYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVAN--ENASEREK 166
++ D +E+++ ++G+G+FG+ L++D +S A+K E + K
Sbjct: 15 MHDSDRYELVK-------DIGSGNFGVAR--LMRDKQS--NELVAVKYIERGEKIAANVK 63
Query: 167 AEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVER 226
E +N S+ ++V+ V+ ++ME GG+L + R C ++ E
Sbjct: 64 REIINHRSLRHP----NIVRFKEVILTPTHLAIVMEYASGGEL--FERICNAGRFSEDE- 116
Query: 227 SPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMV--ADDLTVKVGDFGMTRDIYE 284
+R ++ G++Y + HRDL N ++ + +K+ DFG ++
Sbjct: 117 -----ARFF--FQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKS--S 167
Query: 285 TEYYRKGSRGFLPVRWMAPESLKDGVFTSH-SDVWSYGVVLWEM 327
+ + S P ++APE L + +DVWS GV L+ M
Sbjct: 168 VLHSQPKSTVGTPA-YIAPEVLLKKEYDGKVADVWSCGVTLYVM 210
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 94/230 (40%), Gaps = 34/230 (14%)
Query: 124 ILDELGNGSFGLVYRGLIKDFRSLAEHPCAIK-VANENASEREKAEFLNEASVMKAFDTH 182
+ +LG G F Y L++ H A+K + +RE+A+ EA + + F+
Sbjct: 33 FIQKLGEGGFS--YVDLVEGLHD--GHFYALKRILCHEQQDREEAQ--READMHRLFNHP 86
Query: 183 HVVKL--YGVVSEG--NPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSRILQMA 238
++++L Y + G + +++ G L N + + E +IL +
Sbjct: 87 NILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTE------DQILWLL 140
Query: 239 AEVADGMAYLADKKFVHRDLAARNCMVADDLTVKVGDFGMTRDIYETEYYRKGSRGFLPV 298
+ G+ + K + HRDL N ++ D+ + D G + + + +GSR L +
Sbjct: 141 LGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLG---SMNQACIHVEGSRQALTL 197
Query: 299 R----------WMAPESL---KDGVFTSHSDVWSYGVVLWEMATLASQPY 335
+ + APE V +DVWS G VL+ M PY
Sbjct: 198 QDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAM-MFGEGPY 246
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 93/231 (40%), Gaps = 24/231 (10%)
Query: 105 DDDKLYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIK-VANENASE 163
DD Y + + + + +L +G GSFG V +K + A+K V NE
Sbjct: 82 DDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQV----VKAYDHKVHQHVALKMVRNEKRFH 137
Query: 164 REKAEFLNEASVMKAFD---THHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDA 220
R+ AE + ++ D T +V+ + + N + EL+ +L ++ +
Sbjct: 138 RQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQG 196
Query: 221 ETDVERSPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMVADD--LTVKVGDFGM 278
+ L + + A + + L + +H DL N ++ +KV DFG
Sbjct: 197 FS--------LPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGS 248
Query: 279 TRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWEMAT 329
+ ++ Y SR + APE + + D+WS G +L E+ T
Sbjct: 249 SCYEHQRVYTXIQSRFY-----RAPEVILGARYGMPIDMWSLGCILAELLT 294
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 89/232 (38%), Gaps = 40/232 (17%)
Query: 118 LRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEF-LNEASVM 176
L+ + I+ LG G+FG V L + + A+K+ RE A +N +
Sbjct: 17 LQERYEIVGNLGEGTFGKVVECLD---HARGKSQVALKIIRNVGKYREAARLEINVLKKI 73
Query: 177 KAFDTHH---VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSR 233
K D + V + + + EL+G + +L+ E + + P L
Sbjct: 74 KEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFE-FLK------ENNFQ--PYPLPH 124
Query: 234 ILQMAAEVADGMAYLADKKFVHRDLAARNCMVAD-------------------DLTVKVG 274
+ MA ++ + +L + + H DL N + + + +++V
Sbjct: 125 VRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVA 184
Query: 275 DFGMTRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWE 326
DFG +E +R + P PE + + + DVWS G +L+E
Sbjct: 185 DFGSATFDHEHHTTIVATRHYRP-----PEVILELGWAQPCDVWSIGCILFE 231
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 89/232 (38%), Gaps = 40/232 (17%)
Query: 118 LRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVANENASEREKAEF-LNEASVM 176
L+ + I+ LG G+FG V L + + A+K+ RE A +N +
Sbjct: 26 LQERYEIVGNLGEGTFGKVVECLD---HARGKSQVALKIIRNVGKYREAARLEINVLKKI 82
Query: 177 KAFDTHH---VVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVERSPPTLSR 233
K D + V + + + EL+G + +L+ E + + P L
Sbjct: 83 KEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFE-FLK------ENNFQ--PYPLPH 133
Query: 234 ILQMAAEVADGMAYLADKKFVHRDLAARNCMVAD-------------------DLTVKVG 274
+ MA ++ + +L + + H DL N + + + +++V
Sbjct: 134 VRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVA 193
Query: 275 DFGMTRDIYETEYYRKGSRGFLPVRWMAPESLKDGVFTSHSDVWSYGVVLWE 326
DFG +E +R + P PE + + + DVWS G +L+E
Sbjct: 194 DFGSATFDHEHHTTIVATRHYRP-----PEVILELGWAQPCDVWSIGCILFE 240
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 99/224 (44%), Gaps = 33/224 (14%)
Query: 109 LYKKDSWEVLRSKVTILDELGNGSFGLVYRGLIKDFRSLAEHPCAIKVAN--ENASEREK 166
++ D +E+++ ++G+G+FG+ L++D +S A+K E E K
Sbjct: 15 MHDSDRYELVK-------DIGSGNFGVAR--LMRDKQS--NELVAVKYIERGEKIDENVK 63
Query: 167 AEFLNEASVMKAFDTHHVVKLYGVVSEGNPTLVIMELMGGGDLKNYLRSCRPDAETDVER 226
E +N S+ ++V+ V+ ++ME GG+L + R C ++ E
Sbjct: 64 REIINHRSLRHP----NIVRFKEVILTPTHLAIVMEYASGGEL--FERICNAGRFSEDE- 116
Query: 227 SPPTLSRILQMAAEVADGMAYLADKKFVHRDLAARNCMV--ADDLTVKVGDFGMTRDIYE 284
+R ++ G++Y + HRDL N ++ + +K+ FG ++
Sbjct: 117 -----ARFF--FQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKS--S 167
Query: 285 TEYYRKGSRGFLPVRWMAPESLKDGVFTSH-SDVWSYGVVLWEM 327
+ + S P ++APE L + +DVWS GV L+ M
Sbjct: 168 VLHSQPKSTVGTPA-YIAPEVLLKKEYDGKVADVWSCGVTLYVM 210
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,475,486
Number of Sequences: 62578
Number of extensions: 395173
Number of successful extensions: 3538
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 863
Number of HSP's successfully gapped in prelim test: 173
Number of HSP's that attempted gapping in prelim test: 994
Number of HSP's gapped (non-prelim): 1053
length of query: 364
length of database: 14,973,337
effective HSP length: 100
effective length of query: 264
effective length of database: 8,715,537
effective search space: 2300901768
effective search space used: 2300901768
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)