BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7033
(107 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P48994|TRPL_DROME Transient-receptor-potential-like protein OS=Drosophila
melanogaster GN=trpl PE=1 SV=2
Length = 1124
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 63/72 (87%)
Query: 36 QFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKI 95
+FVAHSNIQQLL+++WYDGLPGFRRK +++K++ ++++ ++FP YCL+YM + TG++
Sbjct: 310 KFVAHSNIQQLLSSIWYDGLPGFRRKSIVDKVICIAQVAVLFPLYCLIYMCAPNCRTGQL 369
Query: 96 IRKPFVKFVVHA 107
+RKPF+KF++HA
Sbjct: 370 MRKPFMKFLIHA 381
>sp|P19334|TRP_DROME Transient receptor potential protein OS=Drosophila melanogaster
GN=trp PE=1 SV=3
Length = 1275
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 54/71 (76%)
Query: 37 FVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKII 96
FVAH N+QQLLAA+WYDGLPGFRRK ++L+D+ K+ FP Y L Y+++ S+ K +
Sbjct: 304 FVAHPNVQQLLAAIWYDGLPGFRRKQASQQLMDVVKLGCSFPIYSLKYILAPDSEGAKFM 363
Query: 97 RKPFVKFVVHA 107
RKPFVKF+ H+
Sbjct: 364 RKPFVKFITHS 374
>sp|Q9VJJ7|TRPG_DROME Transient receptor potential-gamma protein OS=Drosophila
melanogaster GN=trpgamma PE=1 SV=2
Length = 1128
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 57/72 (79%)
Query: 36 QFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKI 95
+FVAHSN+QQLLA++WY+GLPGFRRK + + +D+ +I ++FP + L Y+++ S G+
Sbjct: 289 KFVAHSNVQQLLASIWYEGLPGFRRKNMALQAVDIIRIGIMFPIFSLAYILAPYSSIGQT 348
Query: 96 IRKPFVKFVVHA 107
+RKPF+KF+ H+
Sbjct: 349 MRKPFIKFICHS 360
>sp|Q9UL62|TRPC5_HUMAN Short transient receptor potential channel 5 OS=Homo sapiens
GN=TRPC5 PE=1 SV=1
Length = 973
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 47/72 (65%)
Query: 36 QFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKI 95
+FVA N QQLLA +WYDG PG+RRK + KLL I +FP + Y+IS S+ G
Sbjct: 300 EFVAQPNCQQLLATLWYDGFPGWRRKHWVVKLLTCMTIGFLFPMLSIAYLISPRSNLGLF 359
Query: 96 IRKPFVKFVVHA 107
I+KPF+KF+ H
Sbjct: 360 IKKPFIKFICHT 371
>sp|Q9QX29|TRPC5_MOUSE Short transient receptor potential channel 5 OS=Mus musculus
GN=Trpc5 PE=1 SV=2
Length = 975
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 47/72 (65%)
Query: 36 QFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKI 95
+FVA N QQLLA +WYDG PG+RRK + KLL I +FP + Y+IS S+ G
Sbjct: 300 EFVAQPNCQQLLATLWYDGFPGWRRKHWVVKLLTCMTIGFLFPMLSIAYLISPRSNLGLF 359
Query: 96 IRKPFVKFVVHA 107
I+KPF+KF+ H
Sbjct: 360 IKKPFIKFICHT 371
>sp|O62852|TRPC5_RABIT Short transient receptor potential channel 5 OS=Oryctolagus
cuniculus GN=TRPC5 PE=2 SV=1
Length = 974
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 47/72 (65%)
Query: 36 QFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKI 95
+FVA N QQLLA +WYDG PG+RRK + KLL I +FP + Y+IS S+ G
Sbjct: 300 EFVAQPNCQQLLATLWYDGFPGWRRKHWVVKLLTCMTIGFLFPMLSIAYLISPRSNLGLF 359
Query: 96 IRKPFVKFVVHA 107
I+KPF+KF+ H
Sbjct: 360 IKKPFIKFICHT 371
>sp|Q9UBN4|TRPC4_HUMAN Short transient receptor potential channel 4 OS=Homo sapiens
GN=TRPC4 PE=1 SV=1
Length = 977
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 46/72 (63%)
Query: 36 QFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKI 95
+FVA N QQLLA+ WYD PG+RR+ K++ I L+FP + + Y+I+ S G
Sbjct: 299 EFVAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCFIIGLLFPVFSVCYLIAPKSPLGLF 358
Query: 96 IRKPFVKFVVHA 107
IRKPF+KF+ H
Sbjct: 359 IRKPFIKFICHT 370
>sp|O35119|TRPC4_RAT Short transient receptor potential channel 4 OS=Rattus norvegicus
GN=Trpc4 PE=1 SV=2
Length = 977
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 46/72 (63%)
Query: 36 QFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKI 95
+FVA N QQLLA+ WYD PG+RR+ K++ I L+FP + + Y+I+ S G
Sbjct: 299 EFVAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCFIIGLLFPVFSVCYLIAPKSPLGLF 358
Query: 96 IRKPFVKFVVHA 107
IRKPF+KF+ H
Sbjct: 359 IRKPFIKFICHT 370
>sp|Q9QUQ5|TRPC4_MOUSE Short transient receptor potential channel 4 OS=Mus musculus
GN=Trpc4 PE=1 SV=1
Length = 974
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 46/72 (63%)
Query: 36 QFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKI 95
+FVA N QQLLA+ WYD PG+RR+ K++ I L+FP + + Y+I+ S G
Sbjct: 299 EFVAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCFIIGLLFPVFSVCYLIAPKSPLGLF 358
Query: 96 IRKPFVKFVVHA 107
IRKPF+KF+ H
Sbjct: 359 IRKPFIKFICHT 370
>sp|P79100|TRPC4_BOVIN Short transient receptor potential channel 4 OS=Bos taurus GN=TRPC4
PE=2 SV=2
Length = 979
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 46/72 (63%)
Query: 36 QFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKI 95
+FVA N QQLLA+ WYD PG+RR+ K++ + L+FP + + Y+I+ S G
Sbjct: 299 EFVAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCFIVGLLFPVFSVCYLIAPKSPLGLF 358
Query: 96 IRKPFVKFVVHA 107
IRKPF+KF+ H
Sbjct: 359 IRKPFIKFICHT 370
>sp|Q9TUN9|TRPC1_RABIT Short transient receptor potential channel 1 OS=Oryctolagus
cuniculus GN=TRPC1 PE=2 SV=1
Length = 759
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 46/72 (63%)
Query: 36 QFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKI 95
+FV+ SN QQ L +W+ + G+RRKP +K++ + + + +P L Y+I+ S G+I
Sbjct: 286 EFVSQSNCQQFLNTVWFGQMSGYRRKPTCKKIMTVLTVGIFWPVLSLCYLIAPKSQFGRI 345
Query: 96 IRKPFVKFVVHA 107
I PF+KF++H
Sbjct: 346 IHTPFMKFIIHG 357
>sp|O18784|TRPC1_BOVIN Short transient receptor potential channel 1 OS=Bos taurus GN=TRPC1
PE=2 SV=1
Length = 793
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 46/72 (63%)
Query: 36 QFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKI 95
+FV+ SN QQ L +W+ + G+RRKP +K++ + + + +P L Y+I+ S G+I
Sbjct: 320 EFVSQSNCQQFLNTVWFGQMSGYRRKPTCKKIMTVLTVGIFWPVLSLCYLIAPKSQFGRI 379
Query: 96 IRKPFVKFVVHA 107
I PF+KF++H
Sbjct: 380 IHTPFMKFIIHG 391
>sp|Q61056|TRPC1_MOUSE Short transient receptor potential channel 1 OS=Mus musculus
GN=Trpc1 PE=1 SV=5
Length = 793
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 46/72 (63%)
Query: 36 QFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKI 95
+FV+ SN QQ L +W+ + G+RRKP +K++ + + + +P L Y+I+ S G+I
Sbjct: 320 EFVSQSNCQQFLNTVWFGQMSGYRRKPTCKKIMTVLTVGIFWPVLSLCYLIAPKSQFGRI 379
Query: 96 IRKPFVKFVVHA 107
I PF+KF++H
Sbjct: 380 IHTPFMKFIIHG 391
>sp|Q9QX01|TRPC1_RAT Short transient receptor potential channel 1 OS=Rattus norvegicus
GN=Trpc1 PE=1 SV=1
Length = 759
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 46/72 (63%)
Query: 36 QFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKI 95
+FV+ SN QQ L +W+ + G+RRKP +K++ + + + +P L Y+I+ S G+I
Sbjct: 286 EFVSQSNCQQFLNTVWFGQMSGYRRKPTCKKIMTVLTVGIFWPVLSLCYLIAPKSQFGRI 345
Query: 96 IRKPFVKFVVHA 107
I PF+KF++H
Sbjct: 346 IHTPFMKFIIHG 357
>sp|P48995|TRPC1_HUMAN Short transient receptor potential channel 1 OS=Homo sapiens
GN=TRPC1 PE=1 SV=1
Length = 793
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 46/72 (63%)
Query: 36 QFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKI 95
+FV+ SN QQ L +W+ + G+RRKP +K++ + + + +P L Y+I+ S G+I
Sbjct: 320 EFVSQSNCQQFLNTVWFGQMSGYRRKPTCKKIMTVLTVGIFWPVLSLCYLIAPKSQFGRI 379
Query: 96 IRKPFVKFVVHA 107
I PF+KF++H
Sbjct: 380 IHTPFMKFIIHG 391
>sp|Q9Y210|TRPC6_HUMAN Short transient receptor potential channel 6 OS=Homo sapiens
GN=TRPC6 PE=1 SV=1
Length = 931
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%)
Query: 36 QFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKI 95
+FVAH N QQ L ++WY+ L G R++ + K L + + + P+ L+Y + S GKI
Sbjct: 376 KFVAHPNCQQQLLSIWYENLSGLRQQTMAVKFLVVLAVAIGLPFLALIYWFAPCSKMGKI 435
Query: 96 IRKPFVKFVVHA 107
+R PF+KFV HA
Sbjct: 436 MRGPFMKFVAHA 447
>sp|Q61143|TRPC6_MOUSE Short transient receptor potential channel 6 OS=Mus musculus
GN=Trpc6 PE=1 SV=3
Length = 930
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%)
Query: 36 QFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKI 95
+FVAH N QQ L ++WY+ L G R++ + K L + + + P+ L+Y + S GKI
Sbjct: 375 KFVAHPNCQQQLLSIWYENLSGLRQQTMAVKFLVVLAVAIGLPFLALIYWCAPCSKMGKI 434
Query: 96 IRKPFVKFVVHA 107
+R PF+KFV HA
Sbjct: 435 LRGPFMKFVAHA 446
>sp|Q9HCX4|TRPC7_HUMAN Short transient receptor potential channel 7 OS=Homo sapiens
GN=TRPC7 PE=1 SV=1
Length = 862
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 36 QFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKI 95
+FVAH N QQ L MWY+ L G R++ + K L + + + P+ + Y I+ S G+
Sbjct: 321 KFVAHPNCQQQLLTMWYENLSGLRQQSIAVKFLAVFGVSIGLPFLAIAYWIAPCSKLGRT 380
Query: 96 IRKPFVKFVVHA 107
+R PF+KFV HA
Sbjct: 381 LRSPFMKFVAHA 392
>sp|Q9WVC5|TRPC7_MOUSE Short transient receptor potential channel 7 OS=Mus musculus
GN=Trpc7 PE=2 SV=1
Length = 862
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 36 QFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKI 95
+FVAH N QQ L MWY+ L G R++ + K L + + + P+ + Y I+ S G+
Sbjct: 321 KFVAHPNCQQQLLTMWYENLSGLRQQSIAVKFLAVFGVSIGLPFLAIAYWIAPCSKLGQT 380
Query: 96 IRKPFVKFVVHA 107
+R PF+KFV HA
Sbjct: 381 LRSPFMKFVAHA 392
>sp|Q9JMI9|TRPC3_RAT Short transient receptor potential channel 3 OS=Rattus norvegicus
GN=Trpc3 PE=2 SV=3
Length = 836
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 43/72 (59%)
Query: 36 QFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKI 95
+FVAH N QQ L +WY+ L G R + + K L + + L P+ + Y I+ S GKI
Sbjct: 307 KFVAHPNCQQQLLTIWYENLSGLREQTIAIKCLVVLVVALGLPFLAIGYWIAPCSRLGKI 366
Query: 96 IRKPFVKFVVHA 107
+R PF+KFV HA
Sbjct: 367 LRSPFMKFVAHA 378
>sp|Q9QZC1|TRPC3_MOUSE Short transient receptor potential channel 3 OS=Mus musculus
GN=Trpc3 PE=2 SV=1
Length = 836
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 43/72 (59%)
Query: 36 QFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKI 95
+FVAH N QQ L +WY+ L G R + + K L + + L P+ + Y I+ S GKI
Sbjct: 307 KFVAHPNCQQQLLTIWYENLSGLREQTIAIKCLVVLVVALGLPFLAIGYWIAPCSRLGKI 366
Query: 96 IRKPFVKFVVHA 107
+R PF+KFV HA
Sbjct: 367 LRSPFMKFVAHA 378
>sp|Q13507|TRPC3_HUMAN Short transient receptor potential channel 3 OS=Homo sapiens
GN=TRPC3 PE=1 SV=3
Length = 836
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 43/72 (59%)
Query: 36 QFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKI 95
+FVAH N QQ L +WY+ L G R + + K L + + L P+ + Y I+ S GKI
Sbjct: 307 KFVAHPNCQQQLLTIWYENLSGLREQTIAIKCLVVLVVALGLPFLAIGYWIAPCSRLGKI 366
Query: 96 IRKPFVKFVVHA 107
+R PF+KFV HA
Sbjct: 367 LRSPFMKFVAHA 378
>sp|P34586|TRPL_CAEEL Transient-receptor-potential-like protein OS=Caenorhabditis elegans
GN=trp-1 PE=2 SV=3
Length = 1027
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 45/71 (63%)
Query: 37 FVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKII 96
FV+H + QQLL ++WY+G+P +R + ++ ++P +CL+Y++ S G+++
Sbjct: 325 FVSHPHCQQLLTSIWYEGIPYRQRSGTWANFFLYAFLLFLWPIFCLMYILMPKSRLGRLV 384
Query: 97 RKPFVKFVVHA 107
R PF+KF ++
Sbjct: 385 RSPFMKFFYYS 395
>sp|Q9R244|TRPC2_MOUSE Short transient receptor potential channel 2 OS=Mus musculus
GN=Trpc2 PE=2 SV=2
Length = 1172
Score = 55.5 bits (132), Expect = 9e-08, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 43/72 (59%)
Query: 36 QFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKI 95
QFVAH QQ+L+++W L G+R + KL I L P+ C+ Y ++ S G++
Sbjct: 598 QFVAHPICQQVLSSIWCGNLAGWRGSTTIWKLFVAFLIFLTMPFLCIGYWLAPKSQLGRL 657
Query: 96 IRKPFVKFVVHA 107
++ P +KF++H+
Sbjct: 658 LKIPVLKFLLHS 669
>sp|Q9R283|TRPC2_RAT Short transient receptor potential channel 2 OS=Rattus norvegicus
GN=Trpc2 PE=2 SV=2
Length = 1170
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 43/72 (59%)
Query: 36 QFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKI 95
QFVAH QQ+L+++W L G+R + KL I L P+ C+ Y ++ S G++
Sbjct: 597 QFVAHPICQQVLSSIWCGNLAGWRGSTTIWKLFVAFLIFLTMPFLCIGYWLAPKSRLGRL 656
Query: 96 IRKPFVKFVVHA 107
++ P +KF++H+
Sbjct: 657 LKIPVLKFLLHS 668
>sp|B3CTE6|RS7_ORITI 30S ribosomal protein S7 OS=Orientia tsutsugamushi (strain Ikeda)
GN=rpsG PE=3 SV=1
Length = 173
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 18 ITHRCQSHKYQPLPTNFFQFVAHSNIQQ-LLAAMWYDGLPGFRRKPLLEKLLDLSKII 74
++ RC K + LP+N +Q ++ + Q +LA+ + L K L+EK+LD KII
Sbjct: 1 MSRRCTEVKRKSLPSNKYQSISAATSNQIMLASKLINKLTHHGNKELVEKMLD--KII 56
>sp|Q9YHD3|BAG6A_XENLA Large proline-rich protein bag6-A OS=Xenopus laevis GN=Bag6-a PE=2
SV=1
Length = 1135
Score = 33.5 bits (75), Expect = 0.44, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 20 HRCQSHKYQP-LPTNFFQFVAHSNIQQLLAAMWYDGLPGFRRKP 62
H +H + P LP F Q ++H QQ +AA +PGF+ P
Sbjct: 444 HGGSAHIHMPGLPPEFMQAISHQITQQAMAAASGQQIPGFQAPP 487
>sp|A4IH17|BAG6_XENTR Large proline-rich protein bag6 OS=Xenopus tropicalis GN=Bag6 PE=2
SV=1
Length = 1129
Score = 32.7 bits (73), Expect = 0.60, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 20 HRCQSHKYQP-LPTNFFQFVAHSNIQQLLAAMWYDGLPGFRRKP 62
H +H + P LP F Q ++H QQ +AA +PGF+ P
Sbjct: 440 HGGSAHIHMPGLPPEFMQAISHQITQQAVAAASGQQIPGFQAPP 483
>sp|A5CF22|RS7_ORITB 30S ribosomal protein S7 OS=Orientia tsutsugamushi (strain
Boryong) GN=rpsG PE=3 SV=1
Length = 173
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 18 ITHRCQSHKYQPLPTNFFQFVAHSNIQQ-LLAAMWYDGLPGFRRKPLLEKLLDLSKII 74
++ RC K + LP+N +Q ++ + Q +LA+ + L K L+EK+LD KII
Sbjct: 1 MSRRCTEVKRKSLPSNKYQSISAATPNQIMLASKLINKLTHHGNKELVEKMLD--KII 56
>sp|Q6PA26|BAG6B_XENLA Large proline-rich protein bag6-B OS=Xenopus laevis GN=Bag6-b PE=2
SV=1
Length = 1116
Score = 30.4 bits (67), Expect = 3.2, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 20 HRCQSHKYQP-LPTNFFQFVAHSNIQQLLAAMWYDGLPGFRRKP 62
H +H + P LP F Q +++ QQ +AA +PGF+ P
Sbjct: 423 HGGSAHIHMPGLPPEFMQAISNQITQQAMAAASGQQIPGFQAPP 466
>sp|Q6MLS4|GLMM_BDEBA Phosphoglucosamine mutase OS=Bdellovibrio bacteriovorus (strain
ATCC 15356 / DSM 50701 / NCIB 9529 / HD100) GN=glmM PE=3
SV=1
Length = 457
Score = 30.0 bits (66), Expect = 4.0, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 1 MSESGLAQVATGIGDKLITHRCQSHKY 27
M+E+G+ V TG+GDK + + H Y
Sbjct: 305 MNEAGIKLVKTGVGDKYVVEEMRKHGY 331
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.328 0.143 0.442
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,954,071
Number of Sequences: 539616
Number of extensions: 1470236
Number of successful extensions: 2954
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 2926
Number of HSP's gapped (non-prelim): 31
length of query: 107
length of database: 191,569,459
effective HSP length: 75
effective length of query: 32
effective length of database: 151,098,259
effective search space: 4835144288
effective search space used: 4835144288
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)