BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7035
(70 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P28685|CNTN2_CHICK Contactin-2 OS=Gallus gallus GN=CNTN2 PE=1 SV=1
Length = 1036
Score = 35.4 bits (80), Expect = 0.11, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 7 QLYNNISAGVIVSNQSLVLQNVSRARAGHYTCVGSNGEGDGQSNAQKTAYD 57
+L N S I ++ +L+LQN+S++ G YTC N G S + D
Sbjct: 452 ELLTNSSRVTITADGTLILQNISKSDEGKYTCFAENFMGKANSTGILSVRD 502
>sp|Q9JMB8|CNTN6_MOUSE Contactin-6 OS=Mus musculus GN=Cntn6 PE=2 SV=2
Length = 1028
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 16 VIVSNQSLVLQNVSRARAGHYTCVGSNGEGDGQSN 50
+ + + SL + NV+RA AG YTCV +N G+G+S+
Sbjct: 457 LFLEDGSLKICNVTRADAGSYTCVATNQFGNGKSS 491
>sp|O35158|CDON_RAT Cell adhesion molecule-related/down-regulated by oncogenes
OS=Rattus norvegicus GN=Cdon PE=1 SV=2
Length = 1256
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 23/49 (46%)
Query: 22 SLVLQNVSRARAGHYTCVGSNGEGDGQSNAQKTAYDIGLGIPAEPLFRS 70
SL +Q V+R AG YTC N G QS A T AEP+ S
Sbjct: 484 SLSIQAVTREHAGKYTCEAVNKHGSTQSEAFLTVVPFETNTKAEPVTPS 532
>sp|Q868Z9|PPN_DROME Papilin OS=Drosophila melanogaster GN=Ppn PE=1 SV=2
Length = 2898
Score = 33.5 bits (75), Expect = 0.34, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 5 NVQLYNNISAGVIVSNQSLVLQNVSRARAGHYTCVGSNG--EGDGQSN 50
+V LYNN + LVL +V+ A +G YTC SN +G++N
Sbjct: 2791 DVPLYNNERVQITYQPHRLVLSDVTSADSGKYTCRASNAYTYANGEAN 2838
Score = 29.6 bits (65), Expect = 5.3, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 22/45 (48%)
Query: 2 SFSNVQLYNNISAGVIVSNQSLVLQNVSRARAGHYTCVGSNGEGD 46
S N+ + N V+ +N L + V + G Y CV SNG G+
Sbjct: 2556 SLKNLVINTNKGRYVLTANGDLTIVQVRQTDDGTYVCVASNGLGE 2600
>sp|P97528|CNTN6_RAT Contactin-6 OS=Rattus norvegicus GN=Cntn6 PE=1 SV=1
Length = 1028
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 22 SLVLQNVSRARAGHYTCVGSNGEGDGQSN 50
SL + NV+R+ AG YTCV +N G+G+S+
Sbjct: 463 SLKICNVTRSDAGSYTCVATNQFGNGKSS 491
>sp|Q90610|NEO1_CHICK Neogenin (Fragment) OS=Gallus gallus PE=2 SV=1
Length = 1443
Score = 33.5 bits (75), Expect = 0.42, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 25/50 (50%)
Query: 17 IVSNQSLVLQNVSRARAGHYTCVGSNGEGDGQSNAQKTAYDIGLGIPAEP 66
IV +L + + ++ G Y C+ N G+ Q+ AQ D+ + IP P
Sbjct: 355 IVKEHNLQVLGLVKSDEGFYQCIAENDVGNAQAGAQLIILDLDVAIPTLP 404
>sp|Q3UQ28|PXDN_MOUSE Peroxidasin homolog OS=Mus musculus GN=Pxdn PE=2 SV=2
Length = 1475
Score = 32.7 bits (73), Expect = 0.63, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 17 IVSNQSLVLQNVSRARAGHYTCVGSNGEGDGQSNAQKTAYDIGLGIPAEPLF 68
++ + +L++QN A G Y C+ N G+ ++ Y LG PA P F
Sbjct: 293 LLDDGTLMIQNTQEADEGVYQCMAKNVAGEAKTQEVTLRY---LGSPARPTF 341
>sp|Q03364|FGFR2_XENLA Fibroblast growth factor receptor 2 OS=Xenopus laevis GN=fgfr2 PE=2
SV=1
Length = 813
Score = 32.7 bits (73), Expect = 0.66, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 7/58 (12%)
Query: 13 SAGVIVSNQS---LVLQNVSRARAGHYTCVGSNGEGDGQSNAQKTAYDIGLGIPAEPL 67
+AGV V+++ L ++NVS AG YTC+ N G Q +A T + P PL
Sbjct: 304 AAGVNVTDEEIEVLYVRNVSFEDAGEYTCIAGNSIGISQHSAWLTVHP----APVNPL 357
>sp|Q501W4|VTCN1_RAT V-set domain-containing T-cell activation inhibitor 1 OS=Rattus
norvegicus GN=Vtcn1 PE=2 SV=1
Length = 282
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 16 VIVSNQSLVLQNVSRARAGHYTCVGSNGEGDGQSNAQ 52
V+V N SL L+NV AG YTC +G G +N +
Sbjct: 108 VVVGNASLRLKNVQLTDAGTYTCYIHTSKGKGNANLE 144
>sp|Q7TSP5|VTCN1_MOUSE V-set domain containing T-cell activation inhibitor 1 OS=Mus
musculus GN=Vtcn1 PE=1 SV=1
Length = 283
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 16 VIVSNQSLVLQNVSRARAGHYTCVGSNGEGDGQSNAQ 52
V+V N SL L+NV AG YTC +G G +N +
Sbjct: 108 VVVGNASLRLKNVQLTDAGTYTCYIRTSKGKGNANLE 144
>sp|P22063|CNTN2_RAT Contactin-2 OS=Rattus norvegicus GN=Cntn2 PE=1 SV=1
Length = 1040
Score = 32.0 bits (71), Expect = 1.0, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 26/51 (50%)
Query: 7 QLYNNISAGVIVSNQSLVLQNVSRARAGHYTCVGSNGEGDGQSNAQKTAYD 57
++ N + + S+ +L+++N+SR+ G YTC N G S + D
Sbjct: 459 EILGNSTRVTVTSDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSVRD 509
>sp|Q96JA1|LRIG1_HUMAN Leucine-rich repeats and immunoglobulin-like domains protein 1
OS=Homo sapiens GN=LRIG1 PE=1 SV=2
Length = 1093
Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 21/33 (63%)
Query: 20 NQSLVLQNVSRARAGHYTCVGSNGEGDGQSNAQ 52
NQ LV+QNV AG YTC SN G ++++Q
Sbjct: 745 NQLLVVQNVVAEDAGRYTCEMSNTLGTERAHSQ 777
>sp|Q91287|FGFR3_PLEWA Fibroblast growth factor receptor 3 OS=Pleurodeles waltl GN=FGFR3
PE=2 SV=1
Length = 796
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 8/58 (13%)
Query: 13 SAGVIVSNQSLVLQ---NVSRARAGHYTCVGSNGEGDGQSNAQKTAYDIGLGIPAEPL 67
+AGV S++ L +Q NV+ AG YTC+ N G +A T PAEP+
Sbjct: 300 TAGVNTSDKELEIQFLRNVTFEDAGEYTCLAGNSIGYSHHSAWLTVLP-----PAEPV 352
>sp|Q5MD89|VGFR3_DANRE Vascular endothelial growth factor receptor 3 OS=Danio rerio
GN=flt4 PE=2 SV=1
Length = 1357
Score = 31.2 bits (69), Expect = 1.7, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 3 FSNVQLYNNISAGVIV--SNQSLVLQNVSRARAGHYTCVGSNGEGDGQSNA 51
F + Q + IS G+++ SN++L +Q V AG YTC N +G QS+A
Sbjct: 733 FKDNQPLHQIS-GILLQDSNRTLSIQRVREEDAGLYTCSACNQKGCVQSSA 782
>sp|Q5VST9|OBSCN_HUMAN Obscurin OS=Homo sapiens GN=OBSCN PE=1 SV=3
Length = 7968
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 17/31 (54%)
Query: 21 QSLVLQNVSRARAGHYTCVGSNGEGDGQSNA 51
SLVL +V R G YTC+ SN G +A
Sbjct: 5432 HSLVLLDVGRQHQGTYTCIASNAAGQALCSA 5462
>sp|Q8R0S6|WFKN1_MOUSE WAP, Kazal, immunoglobulin, Kunitz and NTR domain-containing
protein 1 OS=Mus musculus GN=Wfikkn1 PE=2 SV=2
Length = 552
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 9/64 (14%)
Query: 7 QLYNNISAGVIVSNQSLVLQNVSRARAGHYTCVGSNGEGDGQSN------AQKTAYDIGL 60
Q+Y N+ V+ S LVL N AG YTC N G +++ + T D
Sbjct: 239 QMYGNV---VVTSIGQLVLYNAQLEDAGLYTCTARNAAGLLRADFPLSVLQRATTQDRDP 295
Query: 61 GIPA 64
GIPA
Sbjct: 296 GIPA 299
>sp|B4KPU0|PTK7_DROMO Tyrosine-protein kinase-like otk OS=Drosophila mojavensis GN=otk
PE=3 SV=1
Length = 1045
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 20 NQSLVLQNVSRARAGHYTCVGSNGEG 45
N +L+ +NVS G+YTCV SN +G
Sbjct: 435 NGTLIFRNVSAEHRGNYTCVASNSQG 460
>sp|P82987|ATL3_HUMAN ADAMTS-like protein 3 OS=Homo sapiens GN=ADAMTSL3 PE=2 SV=4
Length = 1691
Score = 31.2 bits (69), Expect = 2.0, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 8 LYNNISAGVIVSNQSLVLQNVSRARAGHYTCVGSNGEG 45
L N+S ++ N SL+LQNVS G Y C+ +N G
Sbjct: 1340 LSGNVS---LLFNGSLLLQNVSLENEGTYVCIATNALG 1374
>sp|Q7Z7D3|VTCN1_HUMAN V-set domain-containing T-cell activation inhibitor 1 OS=Homo
sapiens GN=VTCN1 PE=1 SV=1
Length = 282
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 16 VIVSNQSLVLQNVSRARAGHYTCVGSNGEGDGQSNAQ 52
VIV N SL L+NV AG Y C +G G +N +
Sbjct: 108 VIVGNASLRLKNVQLTDAGTYKCYIITSKGKGNANLE 144
>sp|Q90Z00|FGR1A_DANRE Fibroblast growth factor receptor 1-A OS=Danio rerio GN=fgfr1a PE=1
SV=2
Length = 810
Score = 30.8 bits (68), Expect = 2.3, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 13 SAGVIVSNQSL-VLQ--NVSRARAGHYTCVGSNGEGDGQSNAQKTAY 56
+AGV +++ + VLQ NVS AG YTC+ N G +A T Y
Sbjct: 302 TAGVNTTDKEMEVLQIRNVSLEDAGEYTCLAGNSIGHSHHSAWLTVY 348
>sp|P0C5H6|TUTLA_RAT Protein turtle homolog A OS=Rattus norvegicus GN=Igsf9 PE=1 SV=1
Length = 1179
Score = 30.8 bits (68), Expect = 2.5, Method: Composition-based stats.
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 17 IVSNQSLVLQNVSRARAGHYTCVGSNG 43
I+ + SL LQ AGHYTCV SNG
Sbjct: 280 ILVDGSLWLQATQPDDAGHYTCVPSNG 306
Score = 29.6 bits (65), Expect = 5.1, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 16 VIVSNQSLVLQNVSRARAGHYTCVGSNGEGDGQSNAQ 52
V V N +L ++ V R AG YTC S+ EG Q
Sbjct: 184 VQVRNGTLWIRRVERGSAGDYTCQASSTEGSVTHTTQ 220
>sp|Q95YM9|FGFR_HALRO Fibroblast growth factor receptor OS=Halocynthia roretzi GN=FGFR
PE=2 SV=1
Length = 763
Score = 30.8 bits (68), Expect = 2.7, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 11/64 (17%)
Query: 13 SAGVIVSN---QSLVLQNVSRARAGHYTCVGSNGEGDGQSNA--------QKTAYDIGLG 61
+AGV ++ + L+L+NVS AG YTC+ N G +A T I G
Sbjct: 226 AAGVNTTDLDMEVLILKNVSFEEAGEYTCLAGNSIGISHQSAWLSVLPVPPPTTDTITKG 285
Query: 62 IPAE 65
IP E
Sbjct: 286 IPNE 289
>sp|Q05BQ1|TUTLA_MOUSE Protein turtle homolog A OS=Mus musculus GN=Igsf9 PE=1 SV=2
Length = 1179
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 17 IVSNQSLVLQNVSRARAGHYTCVGSNG 43
I+ + SL LQ AGHYTCV SNG
Sbjct: 280 ILVDGSLWLQATQPDDAGHYTCVPSNG 306
Score = 30.4 bits (67), Expect = 3.6, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 16 VIVSNQSLVLQNVSRARAGHYTCVGSNGEG 45
V V N +L ++ V R AG YTC S+ EG
Sbjct: 184 VQVQNGTLWIRRVERGSAGDYTCQASSSEG 213
>sp|P70193|LRIG1_MOUSE Leucine-rich repeats and immunoglobulin-like domains protein 1
OS=Mus musculus GN=Lrig1 PE=2 SV=2
Length = 1091
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 21/33 (63%)
Query: 20 NQSLVLQNVSRARAGHYTCVGSNGEGDGQSNAQ 52
NQ LV+QNV AG YTC SN G ++++Q
Sbjct: 747 NQLLVVQNVMIDDAGRYTCEMSNPLGTERAHSQ 779
>sp|Q29JX6|IHOG_DROPS Interference hedgehog OS=Drosophila pseudoobscura pseudoobscura
GN=iHog PE=3 SV=1
Length = 903
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 11 NISAGVIVSNQSLVLQNVSRARAGHYTCVGSN 42
I + +N +L L NVS A AG YTC+ +N
Sbjct: 193 EIKPELAATNGNLFLTNVSTASAGKYTCLATN 224
>sp|Q02246|CNTN2_HUMAN Contactin-2 OS=Homo sapiens GN=CNTN2 PE=1 SV=1
Length = 1040
Score = 30.4 bits (67), Expect = 2.9, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 11 NISAGVIVSNQSLVLQNVSRARAGHYTCVGSNGEGDGQSNAQKTAYD 57
N S + + +L+++N+SR+ G YTC N G S + D
Sbjct: 461 NSSRVTVTPDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSVRD 507
>sp|B4GKZ8|IHOG_DROPE Interference hedgehog OS=Drosophila persimilis GN=iHog PE=3 SV=1
Length = 906
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 11 NISAGVIVSNQSLVLQNVSRARAGHYTCVGSN 42
I + +N +L L NVS A AG YTC+ +N
Sbjct: 193 EIKPELAATNGNLFLTNVSTASAGKYTCLATN 224
>sp|Q9VS29|DSCL_DROME Down syndrome cell adhesion molecule-like protein Dscam2
OS=Drosophila melanogaster GN=Dscam2 PE=2 SV=3
Length = 2074
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 17 IVSNQSLVLQNVSRARAGHYTCVGSNGEGDG 47
++ N SL+LQ+V R G Y C +NG G G
Sbjct: 762 LLGNGSLLLQHVKEDREGFYLCQANNGIGTG 792
>sp|A2ASS6|TITIN_MOUSE Titin OS=Mus musculus GN=Ttn PE=1 SV=1
Length = 35213
Score = 30.4 bits (67), Expect = 3.3, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 7/58 (12%)
Query: 11 NISAGVIVSNQSLVLQNVSRARAGHYTCVGSNGEGDGQSNAQKTAYDIGLGIPAEPLF 68
N ++ + +L + V++ AG YTC SN G +AQ LG+ P F
Sbjct: 8145 NYKMTLVENTATLTVLKVAKGDAGQYTCYASNVAGKDSCSAQ-------LGVQEPPRF 8195
>sp|Q9HCK4|ROBO2_HUMAN Roundabout homolog 2 OS=Homo sapiens GN=ROBO2 PE=1 SV=2
Length = 1378
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 23 LVLQNVSRARAGHYTCVGSNGEGDGQSN-AQKTAYD 57
L++ N ++ AG YTCVG+N G+ S+ A+ T ++
Sbjct: 188 LMISNTRKSDAGMYTCVGTNMVGERDSDPAELTVFE 223
>sp|Q4H3K6|FGFR_CIOIN Fibroblast growth factor receptor OS=Ciona intestinalis GN=FGFR
PE=2 SV=1
Length = 747
Score = 30.4 bits (67), Expect = 3.7, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 21 QSLVLQNVSRARAGHYTCVGSNGEGDGQSNAQKT 54
+ L L+NVS A AG YTC+ N G +A T
Sbjct: 234 EKLTLKNVSFADAGEYTCLAGNSIGVSHVSAWLT 267
>sp|P0C5J5|WFKN1_RAT WAP, Kazal, immunoglobulin, Kunitz and NTR domain-containing
protein 1 OS=Rattus norvegicus GN=Wfikkn1 PE=2 SV=1
Length = 552
Score = 30.0 bits (66), Expect = 3.8, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Query: 7 QLYNNISAGVIVSNQSLVLQNVSRARAGHYTCVGSNGEG 45
Q+Y N+ V+ S LVL N AG YTC N G
Sbjct: 239 QMYGNV---VVTSIGQLVLYNAQLEDAGLYTCTARNAAG 274
>sp|Q9JKA5|GPA33_MOUSE Cell surface A33 antigen OS=Mus musculus GN=Gpa33 PE=2 SV=2
Length = 319
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 18 VSNQSLVLQNVSRARAGHYTCVGSNGEG 45
VS + L+L+N+S AG+Y C SN G
Sbjct: 191 VSGEPLLLKNISTETAGYYICTSSNDVG 218
>sp|Q7TPD3|ROBO2_MOUSE Roundabout homolog 2 OS=Mus musculus GN=Robo2 PE=2 SV=2
Length = 1470
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 23 LVLQNVSRARAGHYTCVGSNGEGDGQSN-AQKTAYD 57
L++ N ++ AG YTCVG+N G+ S+ A+ T ++
Sbjct: 188 LMISNTRKSDAGMYTCVGTNMVGERDSDPAELTVFE 223
>sp|O01761|UNC89_CAEEL Muscle M-line assembly protein unc-89 OS=Caenorhabditis elegans
GN=unc-89 PE=1 SV=3
Length = 8081
Score = 30.0 bits (66), Expect = 4.3, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 17/34 (50%)
Query: 21 QSLVLQNVSRARAGHYTCVGSNGEGDGQSNAQKT 54
Q LVL NV+ AG YTC+ N G A T
Sbjct: 2947 QELVLDNVTPEDAGKYTCIVENTAGKDTCEATLT 2980
>sp|Q96NZ8|WFKN1_HUMAN WAP, Kazal, immunoglobulin, Kunitz and NTR domain-containing
protein 1 OS=Homo sapiens GN=WFIKKN1 PE=1 SV=1
Length = 548
Score = 30.0 bits (66), Expect = 4.8, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Query: 7 QLYNNISAGVIVSNQSLVLQNVSRARAGHYTCVGSNGEG 45
Q+Y N+ V+ S LVL N AG YTC N G
Sbjct: 235 QMYGNV---VVTSIGQLVLYNARPEDAGLYTCTARNAAG 270
>sp|P70211|DCC_MOUSE Netrin receptor DCC OS=Mus musculus GN=Dcc PE=1 SV=2
Length = 1447
Score = 29.6 bits (65), Expect = 5.1, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 17 IVSNQSLVLQNVSRARAGHYTCVGSNGEGDGQSNAQ 52
IV +L + V ++ G Y CV N G+ QS+AQ
Sbjct: 379 IVGGSNLRILGVVKSDEGFYQCVAENEAGNAQSSAQ 414
>sp|Q9UQ52|CNTN6_HUMAN Contactin-6 OS=Homo sapiens GN=CNTN6 PE=1 SV=1
Length = 1028
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 21/32 (65%)
Query: 17 IVSNQSLVLQNVSRARAGHYTCVGSNGEGDGQ 48
++ + SL + N++R+ AG YTC+ +N G +
Sbjct: 458 LLEDGSLKIYNITRSDAGSYTCIATNQFGTAK 489
>sp|Q63155|DCC_RAT Netrin receptor DCC OS=Rattus norvegicus GN=Dcc PE=1 SV=2
Length = 1445
Score = 29.6 bits (65), Expect = 5.3, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 17 IVSNQSLVLQNVSRARAGHYTCVGSNGEGDGQSNAQ 52
IV +L + V ++ G Y CV N G+ QS+AQ
Sbjct: 379 IVGGSNLRILGVVKSDEGFYQCVAENEAGNAQSSAQ 414
>sp|Q8AXZ4|CNT1A_DANRE Contactin-1a OS=Danio rerio GN=cntn1a PE=2 SV=1
Length = 1032
Score = 29.6 bits (65), Expect = 5.3, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 24/51 (47%)
Query: 7 QLYNNISAGVIVSNQSLVLQNVSRARAGHYTCVGSNGEGDGQSNAQKTAYD 57
+L +N S I + SL L N+S++ G YTC N G S + D
Sbjct: 463 ELLHNSSRISIWLDGSLELLNISKSDEGKYTCFAENDRGRANSTGSLSITD 513
>sp|Q90Z04|CDON_XENLA Cell adhesion molecule-related/down-regulated by oncogenes
OS=Xenopus laevis GN=cdon PE=2 SV=1
Length = 1249
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 23 LVLQNVSRARAGHYTCVGSNGEGDGQ 48
LV++ V R+ AG+Y+CV NG G Q
Sbjct: 277 LVIEQVQRSDAGNYSCVLGNGSGISQ 302
>sp|P97798|NEO1_MOUSE Neogenin OS=Mus musculus GN=Neo1 PE=1 SV=1
Length = 1493
Score = 29.6 bits (65), Expect = 5.5, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 24/50 (48%)
Query: 17 IVSNQSLVLQNVSRARAGHYTCVGSNGEGDGQSNAQKTAYDIGLGIPAEP 66
IV +L + + ++ G Y C+ N G+ Q+ AQ + + IP P
Sbjct: 400 IVKEHNLQVLGLVKSDEGFYQCIAENDVGNAQAGAQLIILEHDVAIPTLP 449
>sp|Q32MD9|CDON_MOUSE Cell adhesion molecule-related/down-regulated by oncogenes OS=Mus
musculus GN=Cdon PE=1 SV=2
Length = 1250
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 17/30 (56%)
Query: 22 SLVLQNVSRARAGHYTCVGSNGEGDGQSNA 51
SL +Q V+ AG YTC +N G QS A
Sbjct: 483 SLSIQAVTLEHAGKYTCEATNKHGSTQSEA 512
>sp|Q8WZ42|TITIN_HUMAN Titin OS=Homo sapiens GN=TTN PE=1 SV=4
Length = 34350
Score = 29.6 bits (65), Expect = 5.8, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 7/58 (12%)
Query: 11 NISAGVIVSNQSLVLQNVSRARAGHYTCVGSNGEGDGQSNAQKTAYDIGLGIPAEPLF 68
N ++ + +L + V + AG YTC SN G +AQ LG+ P F
Sbjct: 8184 NYKMTLVENTATLTVLKVGKGDAGQYTCYASNIAGKDSCSAQ-------LGVQEPPRF 8234
>sp|Q4VA61|DSCL1_MOUSE Down syndrome cell adhesion molecule-like protein 1 homolog OS=Mus
musculus GN=Dscaml1 PE=1 SV=2
Length = 2053
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 24/50 (48%)
Query: 17 IVSNQSLVLQNVSRARAGHYTCVGSNGEGDGQSNAQKTAYDIGLGIPAEP 66
I+ N SL++++V G+Y C SNG G S A I I + P
Sbjct: 746 ILPNSSLLIRHVLEEDIGYYLCQASNGVGTDISKAMFLTVKIPAMITSHP 795
>sp|Q61330|CNTN2_MOUSE Contactin-2 OS=Mus musculus GN=Cntn2 PE=2 SV=2
Length = 1040
Score = 29.6 bits (65), Expect = 6.1, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 25/51 (49%)
Query: 7 QLYNNISAGVIVSNQSLVLQNVSRARAGHYTCVGSNGEGDGQSNAQKTAYD 57
++ N + + + +L+++N+SR+ G YTC N G S + D
Sbjct: 459 EILGNSTRVTVTLDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSVRD 509
>sp|P20241|NRG_DROME Neuroglian OS=Drosophila melanogaster GN=Nrg PE=1 SV=2
Length = 1302
Score = 29.3 bits (64), Expect = 7.1, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Query: 21 QSLVLQNVSRARAGHYTCVGSNGEGDGQSNAQKTAYDIGLGIPAEPLF 68
+SLV++ + AG YTC SNG G+ QS + I L + + P F
Sbjct: 300 KSLVIRQTNFDDAGTYTCDVSNGVGNAQS------FSIILNVNSVPYF 341
>sp|Q6PDN3|MYLK_MOUSE Myosin light chain kinase, smooth muscle OS=Mus musculus GN=Mylk
PE=1 SV=3
Length = 1941
Score = 29.3 bits (64), Expect = 7.7, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 16/33 (48%)
Query: 22 SLVLQNVSRARAGHYTCVGSNGEGDGQSNAQKT 54
SLV+ V G YTC SNG G Q + T
Sbjct: 90 SLVIHTVREEDKGKYTCEASNGSGARQVTVELT 122
>sp|O15146|MUSK_HUMAN Muscle, skeletal receptor tyrosine-protein kinase OS=Homo sapiens
GN=MUSK PE=1 SV=1
Length = 869
Score = 29.3 bits (64), Expect = 8.1, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 17 IVSNQSLVLQNVSRARAGHYTCVGSNGEGDGQSNAQKTAYDI 58
++ + SL + NV + AG Y CV N G S K ++
Sbjct: 169 VLESGSLRIHNVQKEDAGQYRCVAKNSLGTAYSKVVKLEVEV 210
>sp|P11799|MYLK_CHICK Myosin light chain kinase, smooth muscle OS=Gallus gallus PE=1 SV=2
Length = 1906
Score = 28.9 bits (63), Expect = 9.7, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 18/34 (52%)
Query: 21 QSLVLQNVSRARAGHYTCVGSNGEGDGQSNAQKT 54
Q L +QNV A AG YTC N G +A+ T
Sbjct: 211 QYLEIQNVQLADAGIYTCTVVNSAGKASVSAELT 244
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.130 0.364
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,697,755
Number of Sequences: 539616
Number of extensions: 784817
Number of successful extensions: 2327
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 2088
Number of HSP's gapped (non-prelim): 248
length of query: 70
length of database: 191,569,459
effective HSP length: 42
effective length of query: 28
effective length of database: 168,905,587
effective search space: 4729356436
effective search space used: 4729356436
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)