Query psy7036
Match_columns 254
No_of_seqs 209 out of 1688
Neff 12.0
Searched_HMMs 29240
Date Sat Aug 17 01:06:53 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7036.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7036hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2rik_A Titin; I-SET IG fold, p 100.0 5.9E-36 2E-40 222.6 27.4 222 7-254 4-226 (284)
2 3b43_A Titin; I-SET IG fold, e 100.0 1.2E-34 4.2E-39 234.9 28.0 226 3-254 285-511 (570)
3 3b43_A Titin; I-SET IG fold, e 100.0 1.2E-34 4.1E-39 234.9 27.2 229 6-254 3-231 (570)
4 2yd9_A Receptor-type tyrosine- 100.0 1.3E-34 4.6E-39 217.3 24.5 232 6-254 4-239 (304)
5 1qz1_A Neural cell adhesion mo 100.0 8.2E-33 2.8E-37 206.3 23.9 221 8-254 2-230 (291)
6 2wim_A N-CAM 2, NCAM2, neural 100.0 4E-32 1.4E-36 202.6 22.1 220 7-254 3-228 (291)
7 3laf_A Deleted in colorectal c 100.0 1E-32 3.5E-37 214.8 18.3 227 5-254 118-346 (403)
8 2ec8_A MAST/stem cell growth f 100.0 4E-31 1.4E-35 212.5 24.7 224 6-254 209-440 (524)
9 2y25_A Myomesin; structural pr 100.0 2.3E-33 7.8E-38 211.8 9.6 234 2-254 1-256 (317)
10 2a38_A Titin; Z1Z2, structural 100.0 5.1E-31 1.8E-35 185.2 19.6 189 6-206 3-193 (194)
11 2j8h_A Titin, connectin; cardi 100.0 2.8E-30 9.4E-35 181.9 22.9 192 7-207 3-196 (197)
12 3o4o_C Interleukin-1 receptor 100.0 5.4E-32 1.8E-36 206.2 13.5 229 4-254 14-264 (339)
13 1ry7_B FGFR-3, fibroblast grow 100.0 1.2E-32 4E-37 209.4 8.6 233 2-254 2-256 (334)
14 3lcy_A Titin; A-BAND, IG tande 100.0 1E-29 3.4E-34 179.0 22.8 192 4-207 3-195 (197)
15 3qs9_E FL cytokine receptor; i 100.0 1.3E-30 4.5E-35 208.5 20.4 212 5-254 226-441 (527)
16 2yd1_A Tyrosine-protein phosph 100.0 1.8E-29 6.3E-34 179.7 23.9 192 6-208 4-200 (212)
17 2nzi_A Titin; IG-domain, FNIII 100.0 3.7E-29 1.3E-33 187.8 26.4 235 6-254 2-245 (305)
18 2c5d_C AXL oncogene, tyrosine- 100.0 2.3E-29 7.8E-34 176.9 22.3 182 8-206 2-191 (195)
19 3kld_A Contactin 4, axcam, BIG 100.0 2.8E-30 9.7E-35 199.8 19.0 223 6-254 3-329 (384)
20 3rjd_A High affinity immunoglo 100.0 5.7E-30 1.9E-34 188.1 19.3 200 8-252 1-203 (262)
21 2yd6_A PTPRD protein; hydrolas 100.0 3.2E-29 1.1E-33 178.5 22.1 197 6-208 4-204 (212)
22 3laf_A Deleted in colorectal c 100.0 1.2E-29 4.2E-34 197.5 21.6 227 6-254 19-255 (403)
23 1epf_A NCAM, protein (neural c 100.0 7.1E-29 2.4E-33 173.8 22.0 184 8-206 2-189 (191)
24 3qs7_E FL cytokine receptor; i 100.0 6E-29 2.1E-33 194.1 23.8 225 10-254 50-360 (423)
25 3p3y_A Neurofascin; IG domains 100.0 1.5E-29 5E-34 197.0 20.4 227 5-254 13-346 (404)
26 2v44_A NCAM2, neural cell adhe 100.0 7.6E-29 2.6E-33 173.4 21.7 179 10-205 4-184 (189)
27 2rik_A Titin; I-SET IG fold, p 100.0 9.9E-29 3.4E-33 183.6 23.5 188 5-207 95-283 (284)
28 2wv3_A Neuroplastin; igcam, me 100.0 2.1E-28 7.3E-33 171.3 23.3 181 7-207 2-189 (190)
29 3dmk_A DOWN syndrome cell adhe 100.0 1.9E-28 6.6E-33 206.4 26.9 234 7-254 428-748 (816)
30 3rbs_A Myomesin-1; immunoglobu 100.0 1.4E-29 4.6E-34 179.2 16.1 187 7-206 2-205 (207)
31 2v5t_A NCAM2, N-CAM 2, neural 100.0 8E-29 2.8E-33 173.2 19.9 182 8-207 2-187 (189)
32 2ec8_A MAST/stem cell growth f 100.0 1.7E-29 5.7E-34 203.1 18.5 229 5-254 111-348 (524)
33 2rcj_C Light chain; immunoglob 100.0 5.4E-29 1.8E-33 200.1 21.3 235 6-254 112-357 (523)
34 2o26_X MAST/stem cell growth f 100.0 3.9E-29 1.3E-33 186.4 18.9 209 6-254 10-223 (290)
35 3oq3_B IFN-alpha/beta binding 100.0 4.4E-29 1.5E-33 189.3 18.4 209 16-254 37-266 (329)
36 3dmk_A DOWN syndrome cell adhe 100.0 1.2E-28 4.2E-33 207.6 22.9 219 6-254 341-560 (816)
37 4fqp_A Poliovirus receptor; im 100.0 3.7E-29 1.3E-33 188.5 17.5 227 11-254 3-252 (313)
38 2iep_A Muscle-specific kinase 100.0 9.2E-29 3.2E-33 173.3 18.3 184 6-208 5-190 (192)
39 2wng_A Tyrosine-protein phosph 100.0 7.6E-29 2.6E-33 187.9 18.9 231 9-254 4-256 (327)
40 1rhf_A Tyrosine-protein kinase 100.0 3E-28 1E-32 169.4 20.3 177 8-206 2-181 (182)
41 2rcj_C Light chain; immunoglob 100.0 2.2E-28 7.6E-33 196.5 22.4 235 6-254 217-461 (523)
42 2v9r_A Roundabout homolog 1; p 100.0 6.7E-29 2.3E-33 176.7 17.2 192 5-208 6-202 (212)
43 2v5m_A Dscam; neurobiology SPL 100.0 1.1E-29 3.7E-34 196.9 14.0 224 7-254 102-341 (388)
44 2jll_A NCAM2, neural cell adhe 100.0 1.4E-27 4.8E-32 185.1 25.7 186 8-207 1-193 (389)
45 4dep_C Interleukin-1 receptor 100.0 1.8E-28 6.3E-33 187.4 20.4 225 8-254 6-264 (349)
46 1cs6_A Axonin-1; neural cell a 100.0 1.2E-28 4.1E-33 190.6 18.8 227 7-254 3-241 (382)
47 1e07_A Carcinoembryonic antige 100.0 3E-28 1E-32 200.3 22.1 206 12-254 385-593 (642)
48 1itb_B Type 1 interleukin-1 re 100.0 5.6E-30 1.9E-34 193.1 10.9 214 16-254 13-243 (315)
49 2y23_A Myomesin; structural pr 100.0 2.9E-28 1E-32 183.4 19.9 226 17-254 10-256 (312)
50 3ejj_X Macrophage colony-stimu 100.0 2.6E-28 8.9E-33 181.8 19.2 215 7-254 3-221 (289)
51 4fa8_A Secreted protein BARF1; 100.0 3.5E-29 1.2E-33 176.2 13.2 173 17-200 2-194 (203)
52 1bih_A Hemolin; insect immunit 100.0 3.5E-29 1.2E-33 194.4 14.4 231 4-254 2-246 (395)
53 2va4_A NCAM2, N-CAM 2, neural 100.0 1.1E-27 3.8E-32 167.8 20.3 183 8-206 2-191 (192)
54 3u83_A Poliovirus receptor-rel 100.0 5.2E-28 1.8E-32 183.5 19.2 225 8-254 14-267 (331)
55 3ojm_B Fibroblast growth facto 100.0 4.7E-28 1.6E-32 174.5 17.9 197 6-208 13-221 (231)
56 2vr9_A Roundabout 1, ROBO; imm 100.0 8.3E-28 2.9E-32 171.7 18.6 189 6-205 7-203 (217)
57 1qgc_4 Protein (immunoglobulin 100.0 3.3E-28 1.1E-32 191.4 17.3 234 8-254 116-379 (438)
58 3grw_A Fibroblast growth facto 100.0 2E-27 6.9E-32 172.4 20.1 195 7-208 10-218 (241)
59 1cs6_A Axonin-1; neural cell a 100.0 2.9E-28 9.9E-33 188.5 16.6 214 15-254 108-328 (382)
60 3k0w_A Mucosa-associated lymph 100.0 2.2E-27 7.5E-32 169.7 19.6 177 5-208 15-202 (218)
61 1e07_A Carcinoembryonic antige 100.0 4E-27 1.4E-31 193.6 23.7 207 11-254 206-415 (642)
62 2v5m_A Dscam; neurobiology SPL 100.0 1.4E-28 4.8E-33 190.6 14.3 225 7-254 2-246 (388)
63 2r15_A Myomesin-1; sarcomeric 100.0 1.8E-27 6.1E-32 169.4 18.7 179 21-207 15-209 (212)
64 3vh8_G Killer cell immunoglobu 100.0 5.6E-28 1.9E-32 182.3 15.8 220 6-254 22-251 (316)
65 3kld_A Contactin 4, axcam, BIG 100.0 1E-27 3.4E-32 185.6 16.9 172 13-207 210-382 (384)
66 1bih_A Hemolin; insect immunit 100.0 5.9E-27 2E-31 181.9 20.2 174 15-206 219-394 (395)
67 1qz1_A Neural cell adhesion mo 100.0 3E-27 1E-31 176.2 17.9 187 5-207 97-289 (291)
68 1f97_A Junction adhesion molec 100.0 1.8E-27 6.3E-32 169.2 16.0 182 9-207 2-206 (212)
69 4fom_A Poliovirus receptor-rel 100.0 2.6E-27 9E-32 178.0 17.3 220 17-254 8-247 (308)
70 1qgc_4 Protein (immunoglobulin 100.0 2.1E-27 7.3E-32 186.8 17.3 226 10-254 3-254 (438)
71 1za6_B IGG heavy chain; immuno 100.0 2.7E-27 9.2E-32 180.5 16.5 235 13-254 5-278 (344)
72 2wim_A N-CAM 2, NCAM2, neural 100.0 3.9E-27 1.3E-31 175.6 16.1 185 6-208 96-284 (291)
73 2oz4_A Intercellular adhesion 100.0 4.5E-27 1.5E-31 173.0 16.2 200 8-254 6-219 (265)
74 4dkd_C Macrophage colony-stimu 100.0 1.4E-27 4.8E-32 178.1 13.5 215 6-254 2-221 (292)
75 2ocw_A Polymeric-immunoglobuli 100.0 3.2E-26 1.1E-30 186.3 22.2 227 3-252 107-363 (585)
76 2wqr_A IG epsilon chain C regi 100.0 3.1E-27 1.1E-31 178.7 14.9 239 6-254 5-255 (323)
77 3sgj_C Human FCG3A receptor; r 100.0 6E-27 2E-31 165.4 15.4 166 7-208 6-174 (204)
78 1wio_A CD4, T-cell surface gly 99.9 2.2E-27 7.6E-32 182.3 14.2 186 18-254 106-317 (363)
79 3qs9_E FL cytokine receptor; i 99.9 2.2E-26 7.6E-31 184.2 20.4 207 14-254 54-262 (527)
80 3p3y_A Neurofascin; IG domains 99.9 1.5E-26 5E-31 180.1 18.5 171 17-207 231-402 (404)
81 3s97_C Contactin-1; carbonic a 99.9 1.1E-26 3.8E-31 163.9 15.9 186 9-207 8-200 (201)
82 2ocw_A Polymeric-immunoglobuli 99.9 5.7E-26 2E-30 184.9 22.1 218 13-254 5-253 (585)
83 3jz7_A MCAR, CAR, coxsackievir 99.9 4.8E-27 1.6E-31 167.3 13.7 184 12-207 4-211 (214)
84 2ifg_A High affinity nerve gro 99.9 7.3E-27 2.5E-31 178.3 15.4 186 5-207 155-344 (347)
85 1z7z_I Intercellular adhesion 99.9 1.3E-25 4.4E-30 177.3 22.3 215 7-254 84-315 (450)
86 2yd9_A Receptor-type tyrosine- 99.9 3.2E-26 1.1E-30 171.7 17.8 182 8-208 108-291 (304)
87 1z7z_I Intercellular adhesion 99.9 1.7E-26 5.7E-31 182.3 17.0 204 11-254 2-225 (450)
88 4f80_A Butyrophilin subfamily 99.9 5.5E-26 1.9E-30 163.3 18.2 183 15-207 11-212 (226)
89 1fnl_A Low affinity immunoglob 99.9 4.3E-26 1.5E-30 157.4 16.8 165 7-207 6-173 (175)
90 3b5h_A Cervical EMMPRIN, HAB18 99.9 3.3E-25 1.1E-29 154.2 20.2 167 18-207 8-182 (184)
91 3bp6_B Programmed cell death 1 99.9 5.8E-26 2E-30 160.4 16.2 183 11-208 5-193 (202)
92 3p2t_A Leukocyte immunoglobuli 99.9 1E-26 3.6E-31 163.4 12.3 174 7-196 4-179 (196)
93 3qs7_E FL cytokine receptor; i 99.9 1.1E-25 3.7E-30 175.8 18.4 178 14-208 233-414 (423)
94 1igt_B IGG2A intact antibody - 99.9 6.1E-26 2.1E-30 178.8 16.8 237 8-254 123-382 (444)
95 2x1w_L Vascular endothelial gr 99.9 1.2E-25 4E-30 160.1 16.8 183 13-208 12-207 (213)
96 1f2q_A High affinity immunoglo 99.9 3.9E-26 1.3E-30 157.7 13.8 166 7-208 3-171 (176)
97 3mjg_X Beta-type platelet-deri 99.9 9.1E-26 3.1E-30 168.0 16.8 208 9-254 1-215 (289)
98 1hzh_H IGG, immunoglobulin hea 99.9 1.3E-25 4.5E-30 177.5 18.5 235 14-254 6-287 (457)
99 1wio_A CD4, T-cell surface gly 99.9 1.9E-27 6.5E-32 182.7 7.7 196 17-254 3-215 (363)
100 2y25_A Myomesin; structural pr 99.9 6.9E-27 2.4E-31 176.3 10.5 184 17-208 107-315 (317)
101 3oq3_B IFN-alpha/beta binding 99.9 5E-25 1.7E-29 167.0 20.8 188 8-206 128-328 (329)
102 1vca_A VCAM-D1,2, human vascul 99.9 3.1E-25 1.1E-29 156.4 18.1 182 11-208 3-197 (202)
103 2fbo_J V1V2;, variable region- 99.9 1.8E-25 6E-30 163.0 17.4 181 11-198 5-239 (250)
104 1nbq_A JAM, junctional adhesio 99.9 1.2E-26 4.2E-31 164.6 10.7 182 8-206 4-207 (209)
105 3sbw_C Programmed cell death 1 99.9 4.6E-25 1.6E-29 158.0 18.9 187 13-208 6-211 (222)
106 3r4d_A CEA-related cell adhesi 99.9 2.5E-25 8.5E-30 157.8 17.2 179 11-207 2-199 (208)
107 1ry7_B FGFR-3, fibroblast grow 99.9 4.7E-26 1.6E-30 173.0 14.1 186 17-208 132-327 (334)
108 2d3v_A Leukocyte immunoglobuli 99.9 1.7E-26 5.7E-31 162.4 10.7 175 7-196 4-180 (196)
109 2y23_A Myomesin; structural pr 99.9 1.9E-25 6.6E-30 168.0 17.0 188 8-207 106-311 (312)
110 3ry4_A Low affinity immunoglob 99.9 1.2E-25 4E-30 154.5 14.5 163 8-206 4-169 (170)
111 4frw_A Poliovirus receptor-rel 99.9 8.5E-25 2.9E-29 155.9 19.4 187 13-207 4-210 (218)
112 1ugn_A LIR1, leukocyte immunog 99.9 6.8E-26 2.3E-30 159.5 13.1 175 7-196 4-181 (198)
113 3v2a_R Vascular endothelial gr 99.9 1.9E-26 6.3E-31 193.3 11.5 219 9-254 224-458 (772)
114 3ejj_X Macrophage colony-stimu 99.9 7E-25 2.4E-29 163.2 18.6 185 11-207 92-280 (289)
115 3mj8_L Stimulatory hamster ant 99.9 1.3E-25 4.6E-30 159.8 13.4 186 9-202 2-207 (213)
116 1itb_B Type 1 interleukin-1 re 99.9 2.7E-24 9.2E-29 162.0 21.0 181 18-207 113-313 (315)
117 1hzh_H IGG, immunoglobulin hea 99.9 1.4E-25 4.8E-30 177.4 14.1 238 8-254 132-391 (457)
118 3nl4_L Antigen binding fragmen 99.9 3.9E-25 1.3E-29 157.4 15.0 176 9-192 2-198 (213)
119 1igt_B IGG2A intact antibody - 99.9 8.3E-25 2.9E-29 172.4 18.3 234 13-254 5-278 (444)
120 3d9a_L Light chain of hyhel10 99.9 4.3E-25 1.5E-29 157.2 14.4 190 10-205 3-210 (213)
121 2gi7_A GPVI protein; IG-like d 99.9 5.7E-25 2E-29 152.9 14.5 160 7-196 7-168 (184)
122 1uct_A Immunoglobulin alpha FC 99.9 3.9E-25 1.3E-29 157.6 13.4 183 6-208 7-198 (218)
123 2ny1_B T-cell surface glycopro 99.9 4.7E-25 1.6E-29 153.4 13.5 164 17-208 4-179 (184)
124 1oll_A NK receptor; immune sys 99.9 5.8E-25 2E-29 153.4 13.7 168 7-195 3-172 (188)
125 2o26_X MAST/stem cell growth f 99.9 3.5E-25 1.2E-29 165.0 13.4 190 7-208 90-288 (290)
126 1lk3_L 9D7 light chain; antige 99.9 1.5E-24 5E-29 154.1 15.8 185 10-203 3-207 (210)
127 4fqp_A Poliovirus receptor; im 99.9 4.6E-24 1.6E-28 160.7 18.7 187 4-208 113-304 (313)
128 1iga_A IGA1; immunoglobulin; N 99.9 2E-23 6.9E-28 165.8 22.8 239 11-254 4-284 (475)
129 3mj6_A Junctional adhesion mol 99.9 1.2E-24 4E-29 160.3 13.9 207 8-235 5-255 (268)
130 1igy_B IGG1 intact antibody MA 99.9 3.8E-25 1.3E-29 173.8 11.9 236 13-254 4-268 (434)
131 1hng_A CD2; T lymphocyte adhes 99.9 7.6E-25 2.6E-29 151.0 11.3 157 17-205 5-173 (176)
132 3s96_B 3B5H10 FAB light chain; 99.9 3.2E-24 1.1E-28 153.2 15.0 187 9-201 2-213 (218)
133 3r06_A Anti-mouse CD3epsilon a 99.9 2.5E-24 8.4E-29 153.3 14.2 188 9-204 2-209 (213)
134 3tv3_L PGT128 light chain, IG 99.9 1.3E-24 4.5E-29 154.4 12.4 184 9-202 2-205 (211)
135 1igy_B IGG1 intact antibody MA 99.9 4E-26 1.4E-30 179.4 4.9 237 8-254 119-372 (434)
136 1b6u_A KIR2DL3, P58 killer cel 99.9 7.4E-24 2.5E-28 154.3 16.3 220 7-254 6-236 (257)
137 1jbj_A CD3 epsilon and gamma e 99.9 1.1E-24 3.8E-29 151.6 11.5 150 19-198 10-179 (186)
138 2pet_A Lutheran blood group gl 99.9 5E-24 1.7E-28 153.5 15.2 175 13-194 5-211 (231)
139 4dep_C Interleukin-1 receptor 99.9 8.3E-25 2.8E-29 167.1 11.4 184 15-207 127-332 (349)
140 1c1e_H Catalytic antibody 1E9 99.9 7.3E-24 2.5E-28 151.5 15.5 185 13-204 5-216 (219)
141 4i0k_A CD276 antigen; immunogl 99.9 1.3E-24 4.6E-29 155.6 11.4 186 16-208 3-206 (222)
142 1q0x_L FAB 9B1, light chain; a 99.9 1.3E-23 4.4E-28 149.4 16.2 183 10-200 3-207 (212)
143 1iga_A IGA1; immunoglobulin; N 99.9 3.2E-23 1.1E-27 164.6 20.1 225 20-254 138-386 (475)
144 3sob_L Antibody light chain; b 99.9 5.4E-24 1.9E-28 153.9 14.0 190 8-205 24-233 (237)
145 2rgs_A I, IG gamma-2B heavy ch 99.9 2.8E-24 9.7E-29 153.4 12.1 192 6-199 7-207 (218)
146 2c1o_A IGK-C protein; FAB frag 99.9 7.1E-24 2.4E-28 155.0 14.0 188 8-203 38-250 (254)
147 3v2a_R Vascular endothelial gr 99.9 2.2E-23 7.5E-28 174.8 18.6 217 15-254 133-364 (772)
148 2vol_A Murine IGG FC; FC, zinc 99.9 7.1E-24 2.4E-28 150.1 13.2 187 10-198 4-198 (207)
149 2if7_A SLAM family member 6; N 99.9 1.8E-23 6E-28 146.4 15.1 163 13-201 3-185 (193)
150 3u83_A Poliovirus receptor-rel 99.9 3E-23 1E-27 157.3 17.2 183 7-208 129-320 (331)
151 1q9r_B S25-2 FAB (IGG1K) heavy 99.9 2.4E-23 8.1E-28 149.1 15.5 186 14-204 6-219 (222)
152 2ghw_B Anti-SARS SCFV antibody 99.9 2.3E-22 7.9E-27 146.3 20.5 193 9-207 4-241 (247)
153 2wng_A Tyrosine-protein phosph 99.9 2.6E-23 9E-28 157.5 16.0 175 18-198 127-309 (327)
154 2xzc_L FAB A.17 light chain; i 99.9 2.2E-23 7.4E-28 148.7 14.6 185 11-204 4-211 (216)
155 1nfd_E H57 FAB; complex (immun 99.9 6.9E-25 2.4E-29 156.0 6.8 181 11-199 3-203 (212)
156 3pv7_A B7-H6, IG-like domain-c 99.9 1.7E-23 5.6E-28 152.5 14.1 187 13-206 8-222 (248)
157 3d9a_H Heavy chain of hyhel10 99.9 2.3E-23 7.8E-28 147.9 14.0 181 14-202 6-208 (210)
158 1nkr_A P58-CL42 KIR; inhibitor 99.9 3.7E-23 1.3E-27 145.8 14.9 172 7-194 7-183 (201)
159 1p6f_A NKP46, natural cytotoxi 99.9 3.2E-23 1.1E-27 149.9 14.8 181 7-208 6-191 (242)
160 4dkd_C Macrophage colony-stimu 99.9 9.6E-24 3.3E-28 157.3 12.5 190 6-208 86-281 (292)
161 4fom_A Poliovirus receptor-rel 99.9 6.3E-24 2.1E-28 159.5 11.3 178 12-208 118-300 (308)
162 1sy6_A T-cell surface glycopro 99.9 9.9E-24 3.4E-28 148.9 11.2 162 20-207 15-203 (204)
163 1nqb_A Single-chain antibody f 99.9 2.6E-22 8.7E-27 146.7 18.7 184 13-207 5-232 (256)
164 3bkj_L WO2 IGG2A FAB fragment 99.9 3.2E-23 1.1E-27 151.3 13.9 189 8-204 34-247 (252)
165 1moe_A Anti-CEA MAB T84.66; an 99.9 7.1E-23 2.4E-27 148.4 15.6 179 10-193 3-219 (240)
166 3rjd_A High affinity immunoglo 99.9 8.6E-23 2.9E-27 149.8 16.3 157 13-198 87-249 (262)
167 1dr9_A B7-1 (CD80), T lymphocy 99.9 6.4E-23 2.2E-27 144.6 14.9 175 17-204 3-197 (201)
168 3auv_A SC-DSFV derived from th 99.9 2.3E-22 7.9E-27 148.6 18.3 182 8-194 12-235 (276)
169 4dzb_B Vbeta2 (MAIT T cell rec 99.9 4.3E-23 1.5E-27 150.1 14.0 187 9-199 2-222 (246)
170 1pz5_B Heavy chain of FAB (SYA 99.9 7.4E-23 2.5E-27 146.3 14.7 183 14-203 6-216 (220)
171 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.9 2.5E-22 8.5E-27 146.9 17.8 185 8-197 3-235 (256)
172 3uzq_A Anti-dengue MAB 4E11; d 99.9 1.3E-22 4.4E-27 148.2 16.0 193 11-208 4-244 (253)
173 2p1y_A Bispecific alpha/beta T 99.9 2.3E-22 7.9E-27 145.5 17.1 181 10-195 2-222 (238)
174 3esu_F Antibody 14B7* light ch 99.9 1.8E-22 6E-27 147.2 16.5 181 8-193 4-231 (250)
175 1f3r_B FV antibody fragment; I 99.9 1.7E-22 5.9E-27 147.8 16.2 177 14-195 6-232 (257)
176 4fmk_A Poliovirus receptor-rel 99.9 1.4E-22 4.6E-27 145.1 15.4 185 14-206 7-215 (225)
177 2zg1_A Sialic acid-binding IG- 99.9 1.7E-22 5.7E-27 143.8 15.8 177 12-205 4-210 (214)
178 3juy_B 3B3 single chain varian 99.9 4.7E-22 1.6E-26 145.4 18.5 185 7-196 5-244 (256)
179 1mju_H Immunoglobulin MS6-12; 99.9 2.2E-22 7.4E-27 144.5 16.2 188 13-207 5-216 (227)
180 3o4o_C Interleukin-1 receptor 99.9 2.7E-24 9.3E-29 163.6 5.5 182 18-206 130-333 (339)
181 2fbj_H IGA-kappa J539 FAB (hea 99.9 6.7E-22 2.3E-26 141.3 17.7 181 14-199 6-212 (220)
182 1l6x_A Immunoglobulin gamma-1 99.9 6.8E-23 2.3E-27 145.1 12.1 188 9-198 2-198 (207)
183 1i1c_A IGG2A, IG gamma-2A chai 99.9 6.9E-23 2.4E-27 147.9 12.1 193 7-201 14-215 (239)
184 2j6e_L IGM, FAB light chain; a 99.9 3.7E-23 1.3E-27 149.3 10.6 188 9-202 21-229 (234)
185 1dee_B IGM RF 2A2; FAB-IBP com 99.9 1.3E-21 4.6E-26 140.0 18.3 186 14-202 6-221 (223)
186 3umt_A SCFV heavy chain and li 99.9 8.4E-22 2.9E-26 144.1 17.6 190 14-208 8-245 (256)
187 3gkz_A Anti-methamphetamine si 99.9 1.9E-21 6.6E-26 142.2 19.1 193 10-207 10-248 (257)
188 2znx_A SCFV; fluorotryptohpan, 99.9 8E-22 2.7E-26 143.0 16.8 181 9-194 2-222 (242)
189 3eow_R Poliovirus receptor; im 99.9 2.1E-23 7E-28 149.3 8.3 185 14-207 5-211 (221)
190 1op3_H FAB 2G12, heavy chain; 99.9 1.9E-22 6.4E-27 144.7 13.3 179 14-199 6-216 (225)
191 1qok_A MFE-23 recombinant anti 99.9 2.7E-21 9.3E-26 143.3 19.6 191 11-207 29-267 (282)
192 3omz_A Human vdelta1 gamma del 99.9 3.7E-22 1.3E-26 146.2 14.8 184 8-194 2-231 (259)
193 1zvo_C Myeloma immunoglobulin 99.9 5E-21 1.7E-25 153.2 22.0 186 13-202 5-226 (512)
194 1svz_A Immunoglobulin;, single 99.9 2.3E-21 7.8E-26 141.0 18.3 180 10-194 3-228 (247)
195 3bae_H WO2 IGG2A FAB fragment 99.9 3.6E-22 1.2E-26 143.5 13.8 185 15-204 7-222 (228)
196 1hxm_B Gamma-delta T-cell rece 99.9 3.2E-21 1.1E-25 139.8 18.7 195 9-206 2-227 (242)
197 3bqu_C 3H6 FAB light chain; be 99.9 5.6E-24 1.9E-28 153.5 3.7 182 8-197 23-224 (233)
198 1gsm_A Madcam-1, mucosal addre 99.9 7.2E-21 2.5E-25 132.9 18.9 171 9-199 7-196 (210)
199 1dn0_B IGM-kappa cold agglutin 99.9 3.6E-21 1.2E-25 138.6 17.7 189 14-207 6-226 (232)
200 3liz_H 4C3 monoclonal antibody 99.9 9.3E-22 3.2E-26 143.5 14.7 187 14-207 6-219 (253)
201 3ux9_B SCFV antibody; five hel 99.9 1E-21 3.5E-26 143.7 14.9 178 13-195 7-236 (256)
202 4ei6_B Vbeta16 XV19 type II na 99.9 1.2E-21 4.2E-26 142.3 14.9 187 8-199 2-221 (245)
203 2xqy_G A13-D6.3 monoclonal ant 99.9 2E-21 6.9E-26 142.1 15.9 185 12-203 10-220 (261)
204 3q5y_A TCR N15 beta; IG, T cel 99.9 3.5E-21 1.2E-25 139.4 16.7 186 9-199 3-215 (240)
205 2oz4_A Intercellular adhesion 99.9 5.1E-22 1.7E-26 146.0 12.2 160 8-207 100-263 (265)
206 3mjg_X Beta-type platelet-deri 99.9 1.5E-21 5.1E-26 145.2 14.9 172 18-208 105-278 (289)
207 2gjj_A A21 single-chain antibo 99.9 5.3E-21 1.8E-25 140.3 17.4 181 7-194 4-239 (264)
208 2wqr_A IG epsilon chain C regi 99.9 4.6E-22 1.6E-26 150.4 11.8 185 10-197 115-309 (323)
209 2w59_A IGY FCU3-4; immunoglobu 99.9 8.8E-22 3E-26 141.7 12.3 187 8-198 12-218 (231)
210 3nfj_J T cell receptor beta ch 99.9 2.9E-21 1E-25 140.3 14.3 186 10-199 3-221 (245)
211 3bn9_D E2 FAB heavy chain; ant 99.9 2.3E-21 8E-26 141.3 13.4 188 15-207 7-229 (257)
212 1ccz_A Protein (CD58); LFA-3, 99.9 9.9E-22 3.4E-26 134.6 10.6 155 16-204 3-167 (171)
213 3pl6_D MBP peptide / T-cell re 99.9 1.4E-21 4.8E-26 143.9 12.2 187 8-199 26-243 (268)
214 3vh8_G Killer cell immunoglobu 99.9 1.2E-21 4.1E-26 147.6 12.0 174 8-197 119-297 (316)
215 1hnf_A CD2; T lymphocyte adhes 99.9 3.4E-21 1.2E-25 132.9 13.0 158 15-204 6-177 (182)
216 3m8o_H Immunoglobulin A1 heavy 99.9 9.7E-21 3.3E-25 135.4 15.8 179 13-198 5-213 (221)
217 3mtr_A N-CAM-1, NCAM-1, neural 99.9 3.9E-21 1.3E-25 136.9 13.5 185 7-207 18-208 (215)
218 1zvo_C Myeloma immunoglobulin 99.9 8.5E-20 2.9E-24 146.1 22.6 222 22-254 149-437 (512)
219 1x9q_A SCFV, 4M5.3 anti-fluore 99.9 5.6E-21 1.9E-25 140.6 14.5 183 7-194 14-254 (268)
220 2dru_A Chimera of CD48 antigen 99.9 8.5E-21 2.9E-25 131.1 14.2 157 15-203 6-176 (180)
221 1c5d_H Monoclonal antibody aga 99.9 8.3E-21 2.8E-25 135.2 14.2 182 15-203 7-211 (215)
222 2gki_A Nuclease; anti-DNA anti 99.9 2E-20 7E-25 139.2 15.9 178 13-195 27-258 (291)
223 3nl4_H Antigen binding fragmen 99.9 1.5E-20 5.3E-25 133.8 14.6 183 13-205 4-211 (215)
224 2wbj_D OB TCR; transmembrane, 99.9 5E-21 1.7E-25 141.7 12.3 190 8-199 24-247 (279)
225 3fku_X Neutralizing antibody F 99.9 3.3E-20 1.1E-24 137.3 15.9 180 9-195 2-234 (280)
226 3knb_A Titin; IG-like, titin, 99.9 1.1E-20 3.6E-25 117.5 10.8 96 6-104 3-98 (100)
227 3knb_B Obscurin-like protein 1 99.8 9.2E-21 3.2E-25 119.1 10.2 95 5-104 10-104 (107)
228 3qib_D 2B4 beta chain; IG doma 99.8 7.8E-21 2.7E-25 140.0 11.2 190 8-200 27-247 (270)
229 1bec_A 14.3.D T cell antigen r 99.8 9.1E-20 3.1E-24 131.8 15.9 184 11-199 2-214 (238)
230 4acp_A IG gamma-1 chain C regi 99.8 1.2E-20 4.2E-25 135.9 11.2 189 8-198 23-219 (240)
231 2aty_A Complement receptor chi 99.8 9.7E-20 3.3E-24 140.2 16.3 184 12-197 171-362 (376)
232 1ypz_F T-cell receptor gamma c 99.8 8.1E-20 2.8E-24 131.3 14.6 192 10-204 3-223 (230)
233 1za6_B IGG heavy chain; immuno 99.8 1.3E-20 4.4E-25 143.6 10.8 193 7-201 119-334 (344)
234 3to4_D NKT vbeta2 (mouse varia 99.8 5.3E-20 1.8E-24 134.2 13.6 184 11-198 4-220 (253)
235 3tv3_H PGT128 heavy chain, IG 99.8 8.9E-20 3E-24 131.9 14.1 188 14-206 6-235 (239)
236 3qhz_H Human monoclonal antibo 99.8 4.3E-20 1.5E-24 133.0 12.3 189 14-206 6-227 (232)
237 3o3u_N Maltose-binding peripla 99.8 6.2E-20 2.1E-24 149.3 14.5 172 16-198 374-567 (581)
238 3u2s_H PG9 heavy chain; greek 99.8 3.3E-19 1.1E-23 129.5 15.3 189 13-206 4-236 (248)
239 1oga_E TRBC1, T-cell receptor 99.8 1.8E-19 6.2E-24 131.3 13.3 188 9-199 4-220 (252)
240 2yd1_A Tyrosine-protein phosph 99.8 1.1E-18 3.7E-23 123.9 17.0 137 111-254 5-144 (212)
241 1mq8_A ICAM-1, intercellular a 99.8 6.6E-19 2.3E-23 129.7 15.9 207 11-254 2-225 (291)
242 2c5d_C AXL oncogene, tyrosine- 99.8 1.1E-18 3.8E-23 122.2 15.4 132 112-254 2-141 (195)
243 2yd6_A PTPRD protein; hydrolas 99.8 8E-19 2.7E-23 124.6 14.8 137 111-254 5-142 (212)
244 1ow0_A IG alpha-1 chain C regi 99.8 7.3E-21 2.5E-25 135.3 4.2 186 8-198 3-201 (214)
245 2a38_A Titin; Z1Z2, structural 99.8 6.1E-19 2.1E-23 123.4 12.5 131 112-254 5-137 (194)
246 2cqv_A MLCK, myosin light chai 99.8 1.3E-18 4.3E-23 111.1 12.6 98 4-106 3-100 (114)
247 1rhf_A Tyrosine-protein kinase 99.8 2.2E-18 7.7E-23 119.3 14.5 128 114-254 4-133 (182)
248 4fa8_A Secreted protein BARF1; 99.8 2.8E-19 9.7E-24 125.7 9.7 120 122-254 3-140 (203)
249 2j8h_A Titin, connectin; cardi 99.8 1.4E-18 4.8E-23 121.9 13.3 135 111-254 3-138 (197)
250 3knb_A Titin; IG-like, titin, 99.8 2E-18 6.8E-23 107.1 11.5 95 111-207 4-98 (100)
251 2wv3_A Neuroplastin; igcam, me 99.8 4.9E-18 1.7E-22 118.4 14.6 121 112-254 3-126 (190)
252 2c1o_A IGK-C protein; FAB frag 99.8 1.1E-18 3.6E-23 127.4 11.4 160 76-254 11-190 (254)
253 3shs_A HOC head outer capsid p 99.8 7.1E-17 2.4E-21 114.1 19.5 193 8-245 2-209 (304)
254 3n9g_H FAB fragment of MAB CR4 99.8 1.4E-17 4.8E-22 119.7 16.6 188 14-207 6-224 (230)
255 2iep_A Muscle-specific kinase 99.8 2.6E-18 8.8E-23 120.0 12.2 127 112-254 7-134 (192)
256 3qp3_A Titin; I-SET IG-like, s 99.8 3.8E-18 1.3E-22 106.8 11.6 98 3-105 3-100 (103)
257 3lcy_A Titin; A-BAND, IG tande 99.8 6E-18 2E-22 118.6 13.5 129 111-254 6-137 (197)
258 2nzi_A Titin; IG-domain, FNIII 99.8 5.2E-18 1.8E-22 127.0 13.6 156 15-199 111-281 (305)
259 1g1c_A Immunoglobulin-like dom 99.8 6.2E-18 2.1E-22 105.1 11.7 94 7-104 4-97 (99)
260 1epf_A NCAM, protein (neural c 99.8 7.7E-18 2.6E-22 117.5 13.5 125 116-254 6-134 (191)
261 3iu4_H CHP3 FAB heavy chain; a 99.8 3.6E-18 1.2E-22 125.0 12.3 183 15-205 7-221 (263)
262 1ypz_E T cell receptor delta, 99.8 2E-17 6.8E-22 116.8 15.2 170 10-197 3-198 (207)
263 2jll_A NCAM2, neural cell adhe 99.8 8.4E-17 2.9E-21 124.5 19.9 179 5-201 97-281 (389)
264 3mlr_H Human monoclonal anti-H 99.8 1.6E-17 5.4E-22 119.0 14.3 181 15-203 7-221 (226)
265 2va4_A NCAM2, N-CAM 2, neural 99.8 1.5E-17 5E-22 116.1 13.7 116 121-254 13-128 (192)
266 2v44_A NCAM2, neural cell adhe 99.8 1.9E-17 6.6E-22 115.3 14.3 121 118-254 8-130 (189)
267 2kdg_A Myotilin; immonoglobuli 99.8 5.6E-18 1.9E-22 105.5 10.3 96 6-105 3-98 (100)
268 3knb_B Obscurin-like protein 1 99.8 4.8E-18 1.6E-22 106.7 9.9 94 111-208 12-105 (107)
269 3sob_H Antibody heavy chain, l 99.8 5.5E-17 1.9E-21 118.5 16.0 187 15-207 30-250 (256)
270 3puc_A Titin; I-SET IG-like do 99.8 1.6E-17 5.4E-22 103.2 11.2 95 5-104 3-97 (99)
271 2v5t_A NCAM2, N-CAM 2, neural 99.8 2E-17 6.9E-22 115.1 12.6 126 113-254 3-132 (189)
272 1u2h_A APEG-1, aortic preferen 99.7 2.3E-17 8E-22 102.4 11.1 94 7-104 4-97 (99)
273 1wwb_X Protein (brain derived 99.7 6.3E-17 2.1E-21 101.0 12.8 97 6-105 2-98 (103)
274 2kkq_A Myotilin; unknown funct 99.7 3.3E-17 1.1E-21 104.6 11.7 97 5-105 12-109 (116)
275 3irg_A Titin; IG-like, titin, 99.7 2.8E-17 9.5E-22 102.3 10.8 96 6-104 3-98 (100)
276 3ojm_B Fibroblast growth facto 99.7 1.1E-17 3.7E-22 120.2 9.8 124 120-254 27-152 (231)
277 1wit_A Twitchin 18TH IGSF modu 99.7 1.5E-17 5.1E-22 102.0 9.1 89 8-103 2-92 (93)
278 3grw_A Fibroblast growth facto 99.7 6.3E-17 2.1E-21 117.0 13.6 125 119-254 22-148 (241)
279 2vr9_A Roundabout 1, ROBO; imm 99.7 1.3E-17 4.3E-22 118.8 9.7 132 111-254 8-143 (217)
280 1fhg_A Telokin; immunoglobulin 99.7 5E-17 1.7E-21 109.3 11.9 98 4-105 37-134 (154)
281 3irg_B Obscurin-like protein 1 99.7 3.4E-17 1.2E-21 103.2 10.2 95 5-104 10-104 (107)
282 2yuz_A Myosin-binding protein 99.7 2.6E-17 8.8E-22 102.1 9.3 91 5-104 4-94 (100)
283 3k0w_A Mucosa-associated lymph 99.7 9.2E-17 3.1E-21 114.5 13.5 130 111-254 17-152 (218)
284 1iam_A ICAM-1, CD54, intercell 99.7 1.7E-15 5.7E-20 103.6 19.0 162 11-198 2-168 (185)
285 2dav_A SLOW MYBP-C, myosin-bin 99.7 1.6E-16 5.3E-21 101.5 12.8 100 6-105 5-111 (126)
286 3cx2_A Myosin-binding protein 99.7 1.4E-16 4.6E-21 100.5 12.4 98 7-104 3-107 (108)
287 1nct_A Titin; cell adhesion, g 99.7 7.7E-18 2.6E-22 105.8 6.6 94 6-104 12-105 (106)
288 1waa_A Titin; metal binding pr 99.7 1E-16 3.4E-21 97.9 11.3 89 6-104 3-91 (93)
289 3bp6_B Programmed cell death 1 99.7 2E-16 6.9E-21 111.3 14.5 122 120-254 10-137 (202)
290 3rbs_A Myomesin-1; immunoglobu 99.7 1.3E-16 4.4E-21 112.6 13.2 128 121-254 11-151 (207)
291 2edj_A Roundabout homolog 2; K 99.7 6.6E-17 2.2E-21 100.6 10.1 93 6-105 6-98 (100)
292 2bk8_A Connectin, M1, titin he 99.7 1.8E-16 6.3E-21 97.9 11.9 90 10-104 3-93 (97)
293 2eo9_A Roundabout homolog 1; b 99.7 4.5E-17 1.5E-21 104.5 9.5 94 5-105 5-98 (118)
294 1f97_A Junction adhesion molec 99.7 6.5E-17 2.2E-21 114.6 11.0 121 117-254 6-139 (212)
295 3kvq_A Vascular endothelial gr 99.7 1.4E-17 4.9E-22 105.1 6.7 98 1-105 3-100 (108)
296 2dm3_A KIAA0992 protein, palla 99.7 1.8E-17 6.3E-22 105.0 7.0 97 5-105 6-102 (110)
297 3f8u_B Tapasin; endoplasmic re 99.7 1.5E-15 5E-20 115.3 18.5 177 14-196 164-389 (401)
298 1he7_A High affinity nerve gro 99.7 4.1E-16 1.4E-20 99.4 12.7 95 7-105 3-99 (126)
299 2v9r_A Roundabout homolog 1; p 99.7 2.5E-17 8.7E-22 116.7 7.9 134 111-254 8-146 (212)
300 2e7c_A Myosin-binding protein 99.7 2.1E-16 7.2E-21 101.3 11.1 93 7-105 20-115 (118)
301 2yr3_A Myosin light chain kina 99.7 4E-17 1.4E-21 101.3 7.5 92 4-103 7-98 (99)
302 2dm2_A Palladin; beta-sandwich 99.7 8.1E-17 2.8E-21 102.0 8.9 97 5-105 5-102 (110)
303 2ckn_A Basic fibroblast growth 99.7 3.5E-17 1.2E-21 100.7 7.0 87 7-103 8-94 (95)
304 2edn_A Myosin-binding protein 99.7 1.1E-16 3.8E-21 101.0 9.1 98 7-104 11-115 (118)
305 3caf_A Fibroblast growth facto 99.7 9.2E-17 3.1E-21 99.9 8.2 92 7-103 3-99 (100)
306 2cqv_A MLCK, myosin light chai 99.7 7.8E-16 2.7E-20 98.0 12.7 95 111-209 6-100 (114)
307 3s97_C Contactin-1; carbonic a 99.7 7.7E-17 2.6E-21 113.2 8.7 129 117-254 13-147 (201)
308 1mq8_A ICAM-1, intercellular a 99.7 1.9E-17 6.6E-22 121.9 5.3 176 13-208 91-282 (291)
309 2r15_A Myomesin-1; sarcomeric 99.7 7E-16 2.4E-20 109.3 13.2 126 124-254 14-151 (212)
310 1hxm_A Gamma-delta T-cell rece 99.7 1.8E-15 6.3E-20 108.2 15.1 169 10-196 3-198 (229)
311 2kdg_A Myotilin; immonoglobuli 99.7 7.1E-16 2.4E-20 95.8 11.2 94 112-208 5-98 (100)
312 3bfo_A Mucosa-associated lymph 99.7 5.1E-16 1.8E-20 94.7 10.3 84 7-104 2-86 (91)
313 1g1c_A Immunoglobulin-like dom 99.7 7.5E-16 2.6E-20 95.5 11.1 93 112-207 5-97 (99)
314 2d3v_A Leukocyte immunoglobuli 99.7 1E-16 3.5E-21 112.3 7.9 126 112-254 5-132 (196)
315 2lu7_A Obscurin-like protein 1 99.7 3.3E-16 1.1E-20 93.5 8.9 80 15-104 3-82 (84)
316 3u1s_H FAB PGT145 heavy chain; 99.7 1.2E-15 4.3E-20 111.9 13.9 185 15-205 30-262 (267)
317 3nl4_L Antigen binding fragmen 99.7 5.3E-16 1.8E-20 110.1 11.2 126 119-254 8-149 (213)
318 2lvc_A Obscurin-like protein 1 99.7 2.5E-16 8.4E-21 95.6 7.9 86 8-103 4-91 (91)
319 1x44_A Myosin-binding protein 99.7 1.3E-15 4.5E-20 95.1 11.4 91 7-105 6-96 (103)
320 1gxe_A Myosin binding protein 99.7 2E-16 7E-21 103.7 7.9 86 14-104 24-138 (139)
321 2yuv_A Myosin-binding protein 99.7 2E-15 6.9E-20 93.7 12.1 91 5-105 4-95 (100)
322 3p2t_A Leukocyte immunoglobuli 99.7 2.1E-16 7.3E-21 110.7 8.3 126 112-254 5-132 (196)
323 2eo9_A Roundabout homolog 1; b 99.7 1.4E-15 4.8E-20 97.5 11.5 92 111-208 7-98 (118)
324 2k1m_A Myosin-binding protein 99.7 1.3E-15 4.3E-20 93.7 10.6 88 7-104 7-94 (95)
325 3sgj_C Human FCG3A receptor; r 99.7 7.5E-16 2.6E-20 108.5 10.7 113 114-254 9-123 (204)
326 1wit_A Twitchin 18TH IGSF modu 99.7 8.8E-16 3E-20 94.0 9.4 89 112-206 2-92 (93)
327 3qp3_A Titin; I-SET IG-like, s 99.7 1.8E-15 6.3E-20 94.5 11.0 93 112-208 8-100 (103)
328 2fbo_J V1V2;, variable region- 99.7 1.4E-15 4.9E-20 110.4 11.9 124 120-254 10-170 (250)
329 1u2h_A APEG-1, aortic preferen 99.7 1.6E-15 5.3E-20 94.1 10.4 93 112-207 5-97 (99)
330 1wwc_A Protein (NT-3 growth fa 99.6 3.4E-15 1.2E-19 95.7 12.0 100 2-105 2-101 (118)
331 3irg_A Titin; IG-like, titin, 99.6 3.2E-15 1.1E-19 92.8 11.5 94 112-207 5-98 (100)
332 1nbq_A JAM, junctional adhesio 99.6 2.4E-16 8.4E-21 111.3 7.0 123 115-254 7-142 (209)
333 2dlt_A Myosin binding protein 99.6 6.9E-16 2.4E-20 96.9 8.2 92 5-104 5-96 (106)
334 3b5h_A Cervical EMMPRIN, HAB18 99.6 2.6E-15 8.9E-20 104.0 12.0 107 123-254 9-118 (184)
335 2kkq_A Myotilin; unknown funct 99.6 8.5E-15 2.9E-19 93.4 13.3 95 111-208 14-109 (116)
336 2e6p_A Obscurin-like protein 1 99.6 1.7E-15 5.9E-20 94.8 9.7 90 5-104 4-96 (104)
337 2cry_A KIN of IRRE-like protei 99.6 9.9E-17 3.4E-21 103.5 4.1 102 2-105 8-113 (122)
338 2dm3_A KIAA0992 protein, palla 99.6 8.8E-16 3E-20 97.2 8.4 96 111-209 8-103 (110)
339 2pet_A Lutheran blood group gl 99.6 2E-15 6.8E-20 108.4 11.3 124 118-254 6-154 (231)
340 2edf_A Obscurin; beta-sandwich 99.6 1.3E-15 4.4E-20 95.2 9.0 90 6-105 6-95 (103)
341 3mj8_L Stimulatory hamster ant 99.6 3.3E-15 1.1E-19 105.9 12.2 125 121-254 9-150 (213)
342 3puc_A Titin; I-SET IG-like do 99.6 3.6E-15 1.2E-19 92.4 10.8 92 112-207 6-97 (99)
343 2dm2_A Palladin; beta-sandwich 99.6 4E-15 1.4E-19 94.1 11.1 95 111-208 7-102 (110)
344 1fhg_A Telokin; immunoglobulin 99.6 4.2E-15 1.5E-19 99.8 11.8 95 111-208 40-134 (154)
345 3sbw_C Programmed cell death 1 99.6 3.4E-15 1.2E-19 106.5 12.0 124 119-254 8-150 (222)
346 1ugn_A LIR1, leukocyte immunog 99.6 5E-16 1.7E-20 108.9 7.4 126 112-254 5-133 (198)
347 2eny_A Obscurin; beta-sandwich 99.6 1.1E-15 3.9E-20 95.4 8.2 90 7-105 7-97 (104)
348 2v5y_A Receptor-type tyrosine- 99.6 8.2E-15 2.8E-19 122.2 15.7 166 22-208 90-260 (731)
349 2cr6_A KIAA1556 protein, obscu 99.6 1.5E-15 5E-20 96.9 8.7 93 5-105 9-102 (115)
350 2gi7_A GPVI protein; IG-like d 99.6 2.9E-15 9.9E-20 103.8 10.9 117 112-254 8-126 (184)
351 1vca_A VCAM-D1,2, human vascul 99.6 4.3E-15 1.5E-19 104.4 11.8 114 122-254 11-128 (202)
352 1he7_A High affinity nerve gro 99.6 1.3E-14 4.3E-19 92.6 12.8 83 126-208 14-99 (126)
353 2cpc_A KIAA0657 protein; immun 99.6 9.9E-15 3.4E-19 92.7 12.5 93 3-105 5-100 (113)
354 1fnl_A Low affinity immunoglob 99.6 2.5E-15 8.4E-20 103.3 10.2 115 112-254 7-123 (175)
355 2edj_A Roundabout homolog 2; K 99.6 5E-15 1.7E-19 91.9 10.7 92 111-208 7-98 (100)
356 3jz7_A MCAR, CAR, coxsackievir 99.6 2E-15 6.9E-20 107.0 9.9 124 120-254 8-156 (214)
357 3kvq_A Vascular endothelial gr 99.6 2.2E-15 7.6E-20 94.9 8.9 92 111-208 9-100 (108)
358 3so5_A LIG-3, leucine-rich rep 99.6 6.5E-15 2.2E-19 93.3 11.1 99 5-103 7-111 (112)
359 2edh_A Obscurin; structural ge 99.6 1.3E-14 4.4E-19 92.2 12.4 88 7-105 18-105 (113)
360 2edk_A Myosin-binding protein 99.6 4.3E-16 1.5E-20 97.0 5.3 89 6-104 6-98 (101)
361 3bn3_B ICAM-5, intercellular a 99.6 3.5E-14 1.2E-18 97.8 15.3 167 10-196 4-174 (196)
362 1c1e_H Catalytic antibody 1E9 99.6 9.1E-15 3.1E-19 104.1 12.8 128 120-254 8-160 (219)
363 2dav_A SLOW MYBP-C, myosin-bin 99.6 2.6E-14 8.9E-19 91.2 13.5 97 112-208 7-111 (126)
364 4f80_A Butyrophilin subfamily 99.6 1.1E-14 3.9E-19 104.1 13.3 122 120-254 12-153 (226)
365 1hng_A CD2; T lymphocyte adhes 99.6 2E-15 6.8E-20 103.8 8.9 112 122-254 6-129 (176)
366 1wwb_X Protein (brain derived 99.6 3E-14 1E-18 88.8 13.5 84 125-208 14-98 (103)
367 2bk8_A Connectin, M1, titin he 99.6 2.1E-14 7.1E-19 88.6 12.6 87 118-208 7-94 (97)
368 1pd6_A Cardiac MYBP-C;, myosin 99.6 5.1E-15 1.7E-19 92.4 9.8 90 5-104 12-103 (104)
369 1uct_A Immunoglobulin alpha FC 99.6 1.3E-15 4.4E-20 108.4 7.8 128 111-254 8-139 (218)
370 2rgs_A I, IG gamma-2B heavy ch 99.6 2.7E-15 9.4E-20 106.8 9.4 124 124-254 23-153 (218)
371 2ens_A Advanced glycosylation 99.6 8.3E-16 2.8E-20 94.7 5.9 85 5-103 7-93 (96)
372 3m45_A Cell adhesion molecule 99.6 1E-14 3.5E-19 91.8 11.0 94 6-104 4-105 (108)
373 3irg_B Obscurin-like protein 1 99.6 6.5E-15 2.2E-19 92.6 9.9 94 111-208 12-105 (107)
374 2dm7_A KIAA1556 protein; beta- 99.6 7.5E-15 2.6E-19 92.5 10.1 90 5-105 5-94 (108)
375 3cx2_A Myosin-binding protein 99.6 5.7E-14 2E-18 88.4 14.0 97 111-207 3-107 (108)
376 4acp_A IG gamma-1 chain C regi 99.6 2.4E-15 8.4E-20 108.2 8.6 158 82-254 1-166 (240)
377 2yuz_A Myosin-binding protein 99.6 1.1E-14 3.7E-19 90.2 10.3 90 111-208 6-95 (100)
378 3s35_X Vascular endothelial gr 99.6 6.3E-15 2.2E-19 95.0 9.5 94 14-107 14-112 (122)
379 1f2q_A High affinity immunoglo 99.6 2E-15 6.9E-20 103.8 7.4 115 112-254 4-120 (176)
380 1ntl_A CRRY-IG; immunology, co 99.6 9.6E-14 3.3E-18 111.9 18.2 183 11-197 345-537 (551)
381 2v9t_A Roundabout homolog 1; s 99.6 2E-15 6.9E-20 96.6 6.9 99 5-104 6-108 (117)
382 1nct_A Titin; cell adhesion, g 99.6 2.2E-15 7.5E-20 94.5 6.9 93 111-207 13-105 (106)
383 2ghw_B Anti-SARS SCFV antibody 99.6 1.2E-14 4.3E-19 105.4 11.7 133 121-254 11-169 (247)
384 3r4d_A CEA-related cell adhesi 99.6 1.6E-14 5.6E-19 101.9 12.0 117 122-254 9-143 (208)
385 2ckn_A Basic fibroblast growth 99.6 1.3E-14 4.4E-19 89.1 10.0 87 111-206 8-94 (95)
386 3d9a_L Light chain of hyhel10 99.6 9.1E-15 3.1E-19 103.7 10.6 126 119-254 8-148 (213)
387 1pz5_B Heavy chain of FAB (SYA 99.6 2.1E-14 7.1E-19 102.4 12.4 128 120-254 8-161 (220)
388 1oll_A NK receptor; immune sys 99.6 5.2E-15 1.8E-19 102.9 9.0 125 113-254 5-131 (188)
389 2e7b_A Obscurin; IG-like domai 99.6 4.7E-15 1.6E-19 92.6 7.8 89 6-104 6-94 (103)
390 2e6q_A Obscurin-like protein 1 99.6 2.6E-14 9E-19 89.6 11.1 90 6-105 6-105 (112)
391 3r06_A Anti-mouse CD3epsilon a 99.6 2.6E-14 8.9E-19 101.3 12.6 126 119-254 8-148 (213)
392 3qr2_A Basigin; CD147, EMMPRIN 99.6 1.2E-14 4E-19 95.7 10.0 90 6-95 19-116 (137)
393 4hwu_A Fibroblast growth facto 99.6 7E-15 2.4E-19 90.4 8.3 82 13-105 6-87 (95)
394 2cr3_A Basic fibroblast growth 99.6 1.7E-15 5.9E-20 93.8 5.5 83 13-105 8-90 (99)
395 3tv3_L PGT128 light chain, IG 99.6 1.6E-14 5.3E-19 102.3 11.1 123 121-254 9-147 (211)
396 1wwc_A Protein (NT-3 growth fa 99.6 4.8E-14 1.7E-18 90.2 12.3 81 128-208 21-101 (118)
397 3qib_D 2B4 beta chain; IG doma 99.6 8.3E-15 2.8E-19 107.7 10.0 160 76-254 3-185 (270)
398 1gl4_B Basement membrane-speci 99.6 5.8E-15 2E-19 91.3 7.7 87 8-104 9-97 (98)
399 1lk3_L 9D7 light chain; antige 99.6 2.1E-14 7.2E-19 101.5 11.7 126 119-254 7-147 (210)
400 2dku_A KIAA1556 protein; beta- 99.6 1.5E-14 5.2E-19 90.2 9.7 90 6-105 6-95 (103)
401 1q9r_B S25-2 FAB (IGG1K) heavy 99.6 3.6E-14 1.2E-18 101.3 12.8 127 121-254 9-163 (222)
402 1nkr_A P58-CL42 KIR; inhibitor 99.6 1.7E-14 5.9E-19 101.3 10.9 128 112-254 8-140 (201)
403 2ifg_A High affinity nerve gro 99.6 8.2E-16 2.8E-20 117.2 4.4 144 80-254 136-280 (347)
404 3s96_B 3B5H10 FAB light chain; 99.6 2.2E-14 7.6E-19 102.0 11.6 125 121-254 9-157 (218)
405 2e7c_A Myosin-binding protein 99.6 3.7E-14 1.3E-18 90.8 11.5 84 120-208 32-115 (118)
406 3d9a_H Heavy chain of hyhel10 99.6 1.9E-14 6.6E-19 101.8 11.0 126 121-254 9-154 (210)
407 1moe_A Anti-CEA MAB T84.66; an 99.6 2.5E-14 8.5E-19 103.3 11.7 130 118-254 7-155 (240)
408 2if7_A SLAM family member 6; N 99.6 1.9E-14 6.5E-19 100.4 10.6 121 119-254 5-144 (193)
409 1nqb_A Single-chain antibody f 99.6 1.8E-14 6.2E-19 105.1 10.7 124 120-254 8-160 (256)
410 2lu7_A Obscurin-like protein 1 99.6 2.5E-14 8.6E-19 85.3 9.1 79 120-207 4-82 (84)
411 3umt_A SCFV heavy chain and li 99.6 3E-14 1E-18 103.9 11.4 133 121-254 11-172 (256)
412 3ry4_A Low affinity immunoglob 99.6 2.2E-14 7.5E-19 98.0 9.9 111 116-254 8-120 (170)
413 2yr3_A Myosin light chain kina 99.6 9.7E-15 3.3E-19 90.4 7.4 89 111-206 10-98 (99)
414 2cry_A KIN of IRRE-like protei 99.6 6.2E-16 2.1E-20 99.7 2.0 97 111-208 13-113 (122)
415 2vol_A Murine IGG FC; FC, zinc 99.6 1E-14 3.4E-19 103.0 8.2 124 124-254 15-145 (207)
416 2edn_A Myosin-binding protein 99.6 4.6E-14 1.6E-18 89.1 10.3 97 112-208 12-116 (118)
417 2zg1_A Sialic acid-binding IG- 99.6 6.5E-14 2.2E-18 99.3 12.3 125 119-254 7-161 (214)
418 3juy_B 3B3 single chain varian 99.6 4E-14 1.4E-18 103.3 11.3 142 112-254 6-184 (256)
419 3pv7_A B7-H6, IG-like domain-c 99.6 1.8E-14 6.1E-19 104.6 9.3 124 119-254 10-154 (248)
420 1op3_H FAB 2G12, heavy chain; 99.6 1.4E-13 4.7E-18 98.4 13.8 126 121-254 9-164 (225)
421 1gsm_A Madcam-1, mucosal addre 99.6 7.6E-14 2.6E-18 97.5 11.9 110 121-254 16-133 (210)
422 2p1y_A Bispecific alpha/beta T 99.6 4.8E-14 1.6E-18 101.7 11.3 133 119-254 7-161 (238)
423 1q0x_L FAB 9B1, light chain; a 99.6 4.7E-14 1.6E-18 99.9 11.0 127 119-254 7-151 (212)
424 1gxe_A Myosin binding protein 99.6 2.1E-14 7.1E-19 94.1 8.4 85 119-207 25-138 (139)
425 3gkz_A Anti-methamphetamine si 99.5 6.7E-14 2.3E-18 102.1 12.1 134 120-254 16-176 (257)
426 3caf_A Fibroblast growth facto 99.5 2E-14 6.9E-19 89.2 7.9 83 120-206 16-99 (100)
427 1f3r_B FV antibody fragment; I 99.5 5.9E-14 2E-18 102.4 11.6 132 122-254 10-173 (257)
428 2xot_A Amphoterin-induced prot 99.5 1.9E-14 6.3E-19 110.2 9.3 107 14-145 252-360 (361)
429 2xot_A Amphoterin-induced prot 99.5 2.2E-14 7.7E-19 109.8 9.5 106 119-253 253-360 (361)
430 1waa_A Titin; metal binding pr 99.5 3E-14 1E-18 86.9 8.1 88 111-207 4-91 (93)
431 3sob_L Antibody light chain; b 99.5 5.3E-14 1.8E-18 101.3 10.8 126 119-254 31-171 (237)
432 2lvc_A Obscurin-like protein 1 99.5 5.9E-14 2E-18 85.0 9.0 85 112-205 4-90 (91)
433 1qok_A MFE-23 recombinant anti 99.5 9.2E-14 3.2E-18 102.8 11.9 133 120-254 34-195 (282)
434 2x1w_L Vascular endothelial gr 99.5 4.3E-14 1.5E-18 100.2 9.6 119 119-254 14-141 (213)
435 2fbj_H IGA-kappa J539 FAB (hea 99.5 2.4E-13 8.1E-18 96.9 13.5 126 121-254 9-159 (220)
436 4dzb_B Vbeta2 (MAIT T cell rec 99.5 5.1E-14 1.7E-18 102.1 10.2 131 118-254 7-161 (246)
437 4f9l_D 20.1 anti-BTN3A1 antibo 99.5 5.8E-13 2E-17 93.5 14.8 180 10-192 3-230 (259)
438 3uzq_A Anti-dengue MAB 4E11; d 99.5 6.4E-14 2.2E-18 102.0 10.5 135 119-254 8-171 (253)
439 1dr9_A B7-1 (CD80), T lymphocy 99.5 4.2E-14 1.4E-18 99.3 9.2 119 121-254 3-141 (201)
440 1c5d_H Monoclonal antibody aga 99.5 2.2E-13 7.4E-18 96.7 12.9 127 121-254 9-158 (215)
441 3omz_A Human vdelta1 gamma del 99.5 2.7E-14 9.2E-19 104.4 8.3 136 116-254 6-171 (259)
442 2ny1_B T-cell surface glycopro 99.5 1.3E-14 4.5E-19 100.4 6.3 115 121-254 4-131 (184)
443 1x44_A Myosin-binding protein 99.5 1.5E-13 5.2E-18 85.6 10.6 90 112-208 7-96 (103)
444 3bae_H WO2 IGG2A FAB fragment 99.5 2E-13 6.9E-18 97.8 12.7 127 121-254 9-166 (228)
445 1mju_H Immunoglobulin MS6-12; 99.5 2.2E-13 7.5E-18 97.5 12.7 129 119-254 7-157 (227)
446 1l6x_A Immunoglobulin gamma-1 99.5 4.8E-14 1.7E-18 99.5 9.0 123 125-254 16-145 (207)
447 1jbj_A CD3 epsilon and gamma e 99.5 2.6E-14 8.7E-19 99.2 7.4 112 124-254 11-138 (186)
448 3mj6_A Junctional adhesion mol 99.5 2.3E-14 7.9E-19 105.2 7.6 122 117-254 10-155 (268)
449 3rbg_A Cytotoxic and regulator 99.5 8.4E-14 2.9E-18 89.9 9.2 90 11-105 4-101 (124)
450 2znx_A SCFV; fluorotryptohpan, 99.5 1.2E-13 4.2E-18 99.8 11.0 134 118-254 7-158 (242)
451 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.5 4.3E-13 1.5E-17 97.8 13.9 134 117-254 8-170 (256)
452 2xzc_L FAB A.17 light chain; i 99.5 1.3E-13 4.6E-18 97.8 10.9 126 119-254 7-150 (216)
453 1i1c_A IGG2A, IG gamma-2A chai 99.5 5.3E-14 1.8E-18 101.4 8.9 124 124-254 29-159 (239)
454 1dee_B IGM RF 2A2; FAB-IBP com 99.5 3E-13 1E-17 96.5 12.7 127 121-254 9-162 (223)
455 2w59_A IGY FCU3-4; immunoglobu 99.5 4.9E-14 1.7E-18 101.2 8.6 128 119-254 20-154 (231)
456 3bfo_A Mucosa-associated lymph 99.5 2.4E-13 8.3E-18 82.7 10.5 80 115-207 6-86 (91)
457 3esu_F Antibody 14B7* light ch 99.5 2.8E-13 9.4E-18 98.4 12.4 136 116-254 8-167 (250)
458 3auv_A SC-DSFV derived from th 99.5 1.3E-13 4.5E-18 101.7 10.7 136 116-254 16-170 (276)
459 4frw_A Poliovirus receptor-rel 99.5 2.5E-13 8.5E-18 96.2 11.8 126 119-254 6-152 (218)
460 1nfd_E H57 FAB; complex (immun 99.5 3.4E-14 1.2E-18 100.6 7.2 127 119-254 6-149 (212)
461 4i0k_A CD276 antigen; immunogl 99.5 3.2E-14 1.1E-18 101.4 7.0 123 122-254 5-145 (222)
462 3bkj_L WO2 IGG2A FAB fragment 99.5 2.3E-13 8E-18 99.0 11.5 126 119-254 41-186 (252)
463 2edh_A Obscurin; structural ge 99.5 2.1E-13 7E-18 86.6 9.7 99 95-208 7-105 (113)
464 2cr6_A KIAA1556 protein, obscu 99.5 2.9E-14 1E-18 90.8 5.7 90 112-208 13-102 (115)
465 2eys_A NKT15; natural killer T 99.5 6E-13 2.1E-17 93.7 12.9 165 10-196 5-188 (210)
466 1b6u_A KIR2DL3, P58 killer cel 99.5 6.7E-13 2.3E-17 96.6 13.5 128 112-254 7-139 (257)
467 2v5y_A Receptor-type tyrosine- 99.5 9.4E-12 3.2E-16 103.9 21.9 171 7-200 164-346 (731)
468 1zxq_A ICAM-2, intercellular a 99.5 8.2E-12 2.8E-16 85.2 17.6 163 10-195 4-172 (192)
469 2e6p_A Obscurin-like protein 1 99.5 1.9E-13 6.5E-18 85.4 9.0 89 111-208 6-97 (104)
470 2eo1_A OBSCN protein, cDNA FLJ 99.5 1.8E-13 6.2E-18 85.1 8.5 79 16-104 19-97 (102)
471 3s35_X Vascular endothelial gr 99.5 3.1E-13 1E-17 87.0 9.8 88 121-208 17-110 (122)
472 2eny_A Obscurin; beta-sandwich 99.5 2.5E-13 8.6E-18 84.7 9.0 90 111-208 7-97 (104)
473 2xqy_G A13-D6.3 monoclonal ant 99.5 8.7E-13 3E-17 96.3 13.1 129 119-254 13-165 (261)
474 2cr3_A Basic fibroblast growth 99.5 2.3E-13 8E-18 84.1 8.6 80 120-208 11-90 (99)
475 1hnf_A CD2; T lymphocyte adhes 99.5 9.3E-14 3.2E-18 95.7 7.5 114 120-254 7-134 (182)
476 2dlt_A Myosin binding protein 99.5 2E-13 7E-18 85.5 8.5 90 111-207 7-96 (106)
477 2edf_A Obscurin; beta-sandwich 99.5 2E-13 7E-18 85.0 8.4 89 111-208 7-95 (103)
478 2k1m_A Myosin-binding protein 99.5 8.6E-13 3E-17 80.9 11.0 87 112-207 8-94 (95)
479 3eow_R Poliovirus receptor; im 99.5 6.7E-14 2.3E-18 99.8 6.7 122 121-254 8-151 (221)
480 3mtr_A N-CAM-1, NCAM-1, neural 99.5 5.7E-13 1.9E-17 94.5 11.4 94 112-208 19-112 (215)
481 2v9t_A Roundabout homolog 1; s 99.5 1.3E-13 4.3E-18 88.1 7.1 97 111-207 8-108 (117)
482 1p6f_A NKP46, natural cytotoxi 99.5 2E-13 7E-18 98.5 8.8 126 112-254 7-134 (242)
483 2yuv_A Myosin-binding protein 99.5 1.1E-12 3.8E-17 81.2 11.0 89 111-208 6-95 (100)
484 3ux9_B SCFV antibody; five hel 99.5 4.1E-13 1.4E-17 97.9 10.4 132 119-254 9-170 (256)
485 3c6l_A TCR 2W20 alpha chain; T 99.2 5.1E-15 1.7E-19 101.8 0.0 134 11-153 3-151 (185)
486 1svz_A Immunoglobulin;, single 99.5 6.1E-13 2.1E-17 96.4 10.9 132 119-254 8-163 (247)
487 3bn9_D E2 FAB heavy chain; ant 99.5 4.1E-13 1.4E-17 97.8 9.9 127 121-254 9-169 (257)
488 1hxm_B Gamma-delta T-cell rece 99.5 1.2E-12 4.1E-17 94.6 12.3 134 118-254 7-168 (242)
489 3pl6_D MBP peptide / T-cell re 99.5 9.9E-13 3.4E-17 96.5 11.9 133 115-254 29-182 (268)
490 4ei6_B Vbeta16 XV19 type II na 99.5 1.3E-12 4.3E-17 94.6 12.2 132 116-254 6-160 (245)
491 1gl4_B Basement membrane-speci 99.4 1.1E-12 3.8E-17 80.9 10.1 80 119-207 17-97 (98)
492 3bqu_C 3H6 FAB light chain; be 99.4 4.3E-14 1.5E-18 101.6 4.2 126 119-254 30-170 (233)
493 4f9p_D 103.2 anti-BTN3A1 antib 99.4 2.7E-11 9.4E-16 84.6 17.9 174 18-194 10-229 (254)
494 1ccz_A Protein (CD58); LFA-3, 99.4 5.4E-13 1.8E-17 91.1 9.4 109 122-254 5-124 (171)
495 3nl4_H Antigen binding fragmen 99.4 1.1E-12 3.9E-17 93.0 11.5 126 120-254 7-156 (215)
496 4gos_A V-SET domain-containing 99.4 2.6E-13 8.9E-18 87.5 7.3 96 9-104 6-119 (125)
497 3nfj_J T cell receptor beta ch 99.4 1.1E-12 3.7E-17 95.0 11.4 128 119-254 8-160 (245)
498 3so5_A LIG-3, leucine-rich rep 99.4 8E-13 2.7E-17 83.5 9.2 96 111-206 9-111 (112)
499 2j6e_L IGM, FAB light chain; a 99.4 1.5E-13 5.3E-18 98.7 6.3 127 119-254 26-171 (234)
500 2dku_A KIAA1556 protein; beta- 99.4 2.7E-12 9.1E-17 79.9 11.1 89 111-208 7-95 (103)
No 1
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=100.00 E-value=5.9e-36 Score=222.61 Aligned_cols=222 Identities=26% Similarity=0.483 Sum_probs=183.5
Q ss_pred CCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEE
Q psy7036 7 FAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKV 86 (254)
Q Consensus 7 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 86 (254)
.+|.|...|....+.+|++++|.|.+.+.|.+.++|++++..+....++.+..... ...|.|.+++..|+|.|+|
T Consensus 4 ~pP~~~~~p~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~-----~~~L~i~~v~~~d~G~Y~C 78 (284)
T 2rik_A 4 APPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVEN-----TATLTVLKVTKGDAGQYTC 78 (284)
T ss_dssp CCCEEEECCCCEEEETTCCEEEEEEEESSSCCEEEEEETTEECCSSSSEEEEEETT-----EEEEEESSCCGGGCEEEEE
T ss_pred CCCEEEccccceEecCCCcEEEEEEEEcCCCCEEEEEECCEECcCCCcEEEEEcCC-----EEEEEEecCCcccCEEEEE
Confidence 58899999999999999999999999988889999999999987766655443221 2389999999999999999
Q ss_pred EEEcCCCceEEEEEEEEeccccCCCCCccccC-CCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcC
Q psy7036 87 KAKNKMGEVAASINLNFSREQIDGLAPTFLKK-PSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDK 165 (254)
Q Consensus 87 ~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~-~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~ 165 (254)
.+.|..|.....+.|.|. .+|.+... .....+..|+.+.|.|.+.+.|.+.+.|++++..+............
T Consensus 79 ~~~n~~g~~~~~~~l~V~------~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~ 152 (284)
T 2rik_A 79 YASNVAGKDSCSAQLGVQ------EPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVE 152 (284)
T ss_dssp EEEETTEEEEEEEEEEEE------CCCEEEECCCSEEEEETTCCEEEEEEEESSSCCEEEEEETTEECCCSSSEEEEEET
T ss_pred EEEECCceEEEEEEEEcc------CCCcccccCCCceEecCCceEEEEEEEeeeCCCEEEEEECCEECcCCCcEEEEEcC
Confidence 999998888788888886 34443332 33456788999999999999999999999999988766554443332
Q ss_pred CCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEe
Q psy7036 166 DGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLV 245 (254)
Q Consensus 166 ~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~ 245 (254)
.. ..|.|.+++.+|.|.|+|.+.|..|.....+.|.|.. +|.+...+....+.+|+ .+.|.|.+.
T Consensus 153 ~~----~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~----------~p~~~~~~~~~~~~~g~-~v~l~C~~~ 217 (284)
T 2rik_A 153 SV----AVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKE----------PPVFRKKPHPVETLKGA-DVHLECELQ 217 (284)
T ss_dssp TE----EEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC----------CCBCCSCCCCEEECTTC-CEEEEEECB
T ss_pred CE----EEEEECCCCcccCEEEEEEEEcCCCceeEEEEEEEec----------CCcceeCCCcceecCCC-eEEEEEEEE
Confidence 21 3799999999999999999999999888888888874 56666667777788899 999999999
Q ss_pred ccCCCceeC
Q psy7036 246 GEPEPTISW 254 (254)
Q Consensus 246 ~~p~p~~~W 254 (254)
|.|.|.++|
T Consensus 218 g~p~~~v~W 226 (284)
T 2rik_A 218 GTPPFQVSW 226 (284)
T ss_dssp SSSCCEEEE
T ss_pred ecCCCEEEE
Confidence 999999998
No 2
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=1.2e-34 Score=234.88 Aligned_cols=226 Identities=22% Similarity=0.454 Sum_probs=187.7
Q ss_pred CCCCCCCeeEeCCC-ceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCC
Q psy7036 3 IAEDFAPSFTQKPQ-LRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDA 81 (254)
Q Consensus 3 ~~~~~~p~~~~~~~-~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 81 (254)
+.+..+|.|...+. ...+.+|+.+.|.|.+.|.|.+.++|+|++..+....++.+.... ....|.|.+++.+|+
T Consensus 285 l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~~~~l~~~~~~~~~~~~-----~~~~L~i~~v~~~D~ 359 (570)
T 3b43_A 285 LGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVE-----SVAVLEMYNLSVEDS 359 (570)
T ss_dssp ECCBCCCEEEECCCSBCCEESSCEEEEEEEEESSSSCEEEEEETTEECCCSSSEEEEEET-----TEEEEEEESCCGGGC
T ss_pred EEeecCCcccccCCCccEEcCCCcEEEEEEEeeCCCCEEEEeECCEECCCCCcEEEEEEC-----CEEEEEECCCCcccC
Confidence 34556788776554 345789999999999999999999999999998877665544322 123799999999999
Q ss_pred eEEEEEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceE
Q psy7036 82 GLYKVKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKF 161 (254)
Q Consensus 82 G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~ 161 (254)
|.|+|.+.|..|.......|.|. .+|.+...+....+.+|+.+.|.|.+.|.|.+.+.|+|++..+.......+
T Consensus 360 G~Y~C~a~N~~g~~~~~~~l~V~------~~P~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~ 433 (570)
T 3b43_A 360 GDYTCEAHNAAGSASSSTSLKVK------EPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKI 433 (570)
T ss_dssp EEEEEEEEBTTBCCEEEEEECEE------CCCEECSCCCCEEECTTCCEEEEEEEESSSSCCCEEEETTEECCSSSSEEE
T ss_pred EEEEEEEEeCCCEEEEEEEEEec------CCCeeecCCCceeecCCCEEEEEEEEecCCCCEEEEEECCEECcCCCCEEE
Confidence 99999999999998888888887 466666666677788999999999999999999999999998876555444
Q ss_pred EEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEE
Q psy7036 162 SIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIE 241 (254)
Q Consensus 162 ~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~ 241 (254)
..... ...|.|.++..+|.|.|+|.|.|..|.......|.|.. +|.+...+....+..|+ .+.|.
T Consensus 434 ~~~~~----~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~v~~----------~P~~~~~~~~~~~~~g~-~~~l~ 498 (570)
T 3b43_A 434 MSENF----LTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLKA----------PPRFVKKLSDISTVVGE-EVQLQ 498 (570)
T ss_dssp EEETT----EEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECC----------CCEEEECCCCBCCBTTC-CEEEE
T ss_pred EEcCC----EEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEecc----------CCcccccCCCceecCCC-eEEEE
Confidence 32221 13799999999999999999999999988888888864 77888888888889999 99999
Q ss_pred EEEeccCCCceeC
Q psy7036 242 CRLVGEPEPTISW 254 (254)
Q Consensus 242 C~~~~~p~p~~~W 254 (254)
|.+.|.|.|.+.|
T Consensus 499 c~~~g~p~~~v~W 511 (570)
T 3b43_A 499 ATIEGAEPISVAW 511 (570)
T ss_dssp EEEESCSSCCCEE
T ss_pred EEEecCCCCEEEE
Confidence 9999999999998
No 3
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=1.2e-34 Score=234.91 Aligned_cols=229 Identities=25% Similarity=0.450 Sum_probs=185.8
Q ss_pred CCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEE
Q psy7036 6 DFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYK 85 (254)
Q Consensus 6 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 85 (254)
..+|.|...++...+.+|++++|.|.+.|.|.+.++|||+|..+....++.+... .....|.|.+++.+|+|.|+
T Consensus 3 ~~pP~f~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~-----~~~~~L~I~~v~~~D~G~Y~ 77 (570)
T 3b43_A 3 MEPPYFIEPLEHVEAAIGEPITLQCKVDGTPEIRIAWYKEHTKLRSAPAYKMQFK-----NNVASLVINKVDHSDVGEYT 77 (570)
T ss_dssp CCCCEEEECCCCEEECTTSCEEEEEEEESSSSCEEEEECSSSBCCCCSSEEEECC-----TTEEEEEESSCCGGGCEEEE
T ss_pred CCCCcceEECCceEEcCCCEEEEEEEEccCCCCEEEEEECCEEccCCCCEEEEEE-----CCEEEEEEccCChhhCEEEE
Confidence 4589999999999999999999999999999999999999998876655544321 12348999999999999999
Q ss_pred EEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcC
Q psy7036 86 VKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDK 165 (254)
Q Consensus 86 C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~ 165 (254)
|.+.|..|.......+.|... ..+|.+...........|+.+.|.|.+.+.|++.+.|+|++..+............
T Consensus 78 C~a~N~~g~~~~~~~l~v~~~---~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~ 154 (570)
T 3b43_A 78 CKAENSVGAVASSAVLVIKER---KLPPSFARKLKDVHETLGFPVAFECRINGSEPLQVSWYKDGELLKDDANLQTSFIH 154 (570)
T ss_dssp EEEEETTEEEEEEEEEEECCC---CCCCEESSCCCCEEEETTSCEEEEEEEESSSSCEEEEEETTEECCCCSSEEEEEET
T ss_pred EEEEeCCceEEEEEEEEECCC---CCCCcccccCCCeEecCCCeEEEEEEEccCCCCEEEEEECCEECcCCCCEEEEEEC
Confidence 999999988777777776531 13556655566677778999999999999999999999999988765543333222
Q ss_pred CCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEe
Q psy7036 166 DGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLV 245 (254)
Q Consensus 166 ~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~ 245 (254)
+. ..|.|.++..+|.|.|+|.|.|..|....+..+.|... ..+|.+...|....+.+|+ .+.|.|.+.
T Consensus 155 ~~----~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~-------~~pp~~~~~p~~~~v~~G~-~~~l~C~~~ 222 (570)
T 3b43_A 155 NV----ATLQILQTDQSHVGQYNCSASNPLGTASSSAKLTLSEH-------EVPPFFDLKPVSVDLALGE-SGTFKCHVT 222 (570)
T ss_dssp TE----EEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC-------CCCCEEEECCCCBCCBSBS-CEEEEEEEE
T ss_pred CE----EEEEECcCChHHCEEEEEEEEeCCcEEEEEEEEEEcCC-------CCCCccccCCceeEecCCC-eEEEEEEEE
Confidence 21 37999999999999999999999998877777777632 2367777778777888999 999999999
Q ss_pred ccCCCceeC
Q psy7036 246 GEPEPTISW 254 (254)
Q Consensus 246 ~~p~p~~~W 254 (254)
|.|.|.++|
T Consensus 223 g~p~p~i~W 231 (570)
T 3b43_A 223 GTAPIKITW 231 (570)
T ss_dssp SSSCCEEEE
T ss_pred ECCCCEEEE
Confidence 999999998
No 4
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.3e-34 Score=217.34 Aligned_cols=232 Identities=22% Similarity=0.395 Sum_probs=173.9
Q ss_pred CCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCC-CCCeEE
Q psy7036 6 DFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIE-TDAGLY 84 (254)
Q Consensus 6 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~-~d~G~Y 84 (254)
..+|.|...|....+.+|++++|.|.+.|.|.+.++|+++|..+... +........+ ....|.|.+++. .|+|.|
T Consensus 4 ~~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~g~~i~~~-~~~~~~~~~~---~~~~L~i~~~~~~~D~G~Y 79 (304)
T 2yd9_A 4 EEPPRFIKEPKDQIGVSGGVASFVCQATGDPKPRVTWNKKGKKVNSQ-RFETIEFDES---AGAVLRIQPLRTPRDENVY 79 (304)
T ss_dssp CCCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEC-------CT-TEEEEEETTT---TEEEEEECSCCTTTTCSEE
T ss_pred ccCCeeeecCCceEecCCCeEEEEEEEEEeCCCeEEEEECCEECCCC-ceEEEEecCC---CceEEEEecccccCCCeEE
Confidence 46899999999999999999999999999999999999999987543 3333222221 123799999998 999999
Q ss_pred EEEEEcCCCceEEEEEEEEeccccC-CCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCc-ceEE
Q psy7036 85 KVKAKNKMGEVAASINLNFSREQID-GLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKR-HKFS 162 (254)
Q Consensus 85 ~C~~~~~~~~~~~~~~l~v~~~~~~-~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~-~~~~ 162 (254)
+|.+.|..|.....+.|.|...... ...|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+..... .++.
T Consensus 80 ~C~a~n~~g~~~~~~~l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~ 159 (304)
T 2yd9_A 80 ECVAQNSVGEITVHAKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIK 159 (304)
T ss_dssp EEEEECSSCEECCEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEECCEEECSSCCEEEEEETTEECCGGGGTTSEE
T ss_pred EEEEECCCCeEEEEEEEEEeccccCCCCCCeeecCCccEEEeCCCeEEEEEECccCCCCeEEEEECCEECcCCCCcceEE
Confidence 9999999988777888888643221 1124555556667788999999999999999999999999988764422 2333
Q ss_pred EcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEE-EEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEE
Q psy7036 163 IDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNAT-ISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIE 241 (254)
Q Consensus 163 ~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~ 241 (254)
...++ .|.|.+++.+|.|.|+|.+.|..|..... ..+.|.. ...+|.+...+....+.+|+ .+.|.
T Consensus 160 ~~~~~-----~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~-------~~~~P~~~~~~~~~~v~~G~-~v~l~ 226 (304)
T 2yd9_A 160 QLRSG-----ALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRV-------QNVAPRFSILPMSHEIMPGG-NVNIT 226 (304)
T ss_dssp ECTTS-----CEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC-------CCEEEEEEECCCCBCCCTTC-CEEEE
T ss_pred eCCCe-----EEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEe-------eccCCcEEecCCceEEcCCC-eEEEE
Confidence 33333 79999999999999999999998865422 4444442 11357777777777888999 99999
Q ss_pred EEEeccCCCceeC
Q psy7036 242 CRLVGEPEPTISW 254 (254)
Q Consensus 242 C~~~~~p~p~~~W 254 (254)
|.+.|.|.|.++|
T Consensus 227 C~~~g~p~p~v~W 239 (304)
T 2yd9_A 227 CVAVGSPMPYVKW 239 (304)
T ss_dssp EEEEEESCCEEEE
T ss_pred EEEeeeCCCEEEE
Confidence 9999999999998
No 5
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=100.00 E-value=8.2e-33 Score=206.34 Aligned_cols=221 Identities=23% Similarity=0.408 Sum_probs=169.2
Q ss_pred CCeeEeCCCceeecCCCeEEEEEEEeeCC-CCceEEEe-CCEEeeeCC-cceEEEeecCCcceEEEEEEeccCCCCCeEE
Q psy7036 8 APSFTQKPQLRQEDEGNRLIFECQLLCNP-KPDIVWFR-GETQLSEDT-RTVMKTTPIGTNKYLVALELDDVIETDAGLY 84 (254)
Q Consensus 8 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~-~~~v~W~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 84 (254)
+|.|...|....+.+|++++|.|.+.+.+ .+.+.|++ +|..+.... +..+.... ...+.|.|.+++..|+|.|
T Consensus 2 ~~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~~~~~~~~~~~~----~~~~~L~i~~~~~~D~G~Y 77 (291)
T 1qz1_A 2 VLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWND----DDSSTLTIYNANIDDAGIY 77 (291)
T ss_dssp CCCEEEESSSEEEETTCCEEEEEEESSCCSCCEEEEECTTSCBCCSSCSSEEEEEEE----TTEEEEEECSCCGGGCEEE
T ss_pred CcceEecCCCceEeCCCeEEEEEEeCCCCCCcEeEEECCCCeECccCCceEEEEEcC----CCeEEEEEecCCCCCCEEE
Confidence 57888999999999999999999998876 68999999 777665432 22222111 1234899999999999999
Q ss_pred EEEEEcCCCc-eEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEE
Q psy7036 85 KVKAKNKMGE-VAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSI 163 (254)
Q Consensus 85 ~C~~~~~~~~-~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~ 163 (254)
+|.+.|..+. ....+.|.|. .+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+......++..
T Consensus 78 ~C~~~n~~g~~~~~~~~l~v~------~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~ 151 (291)
T 1qz1_A 78 KCVVTAEDGTQSEATVNVKIF------QKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIV 151 (291)
T ss_dssp EEEEECTTSCEEEEEEEEEEE------CCSEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEETTSCSSTTCCTTEEE
T ss_pred EEEEEcCCCCeeEEEEEEEee------ccccccCCCCcccccCCCeEEEEEEeccCCCCEEEEEECCEEcccCCCceEEE
Confidence 9999998854 4556777775 34555555566778899999999999999999999999998876554444444
Q ss_pred cCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcc--eEEEEEEEecCCCCCCCCCCCCeeecCC--ccccccCCCCcEE
Q psy7036 164 DKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGES--NATISLNFDSDDAPVPGEGTKPVFTERP--VTKQSDDDLNDIV 239 (254)
Q Consensus 164 ~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~p~~~~~~--~~~~~~~g~~~~~ 239 (254)
..++ .|.|.+++.+|.|.|+|.+.|..+.. ...+.+.|.. +|.+...+ ....+.+|+ .+.
T Consensus 152 ~~~~-----~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~----------~p~~~~~~~~~~~~~~~g~-~v~ 215 (291)
T 1qz1_A 152 LSNN-----YLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNV----------PPTVQARQSIVNATANLGQ-SVT 215 (291)
T ss_dssp CTTS-----CEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEEE----------EEEEEESCSEEEEETTSCC-CEE
T ss_pred ccCC-----cEEEccCccccCeEEEEEEEecCCCceeeEEEEEEEec----------CCcccccccccccccccCc-eEE
Confidence 4444 69999999999999999999876443 3455555553 45554432 344677898 999
Q ss_pred EEEEEeccCCCceeC
Q psy7036 240 IECRLVGEPEPTISW 254 (254)
Q Consensus 240 l~C~~~~~p~p~~~W 254 (254)
|.|.+.|.|.|.++|
T Consensus 216 l~C~~~g~p~p~i~W 230 (291)
T 1qz1_A 216 LVCDADGFPEPTMSW 230 (291)
T ss_dssp EEEEEEEESCCEEEE
T ss_pred EEEEEEEeCCCcEEE
Confidence 999999999999998
No 6
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=100.00 E-value=4e-32 Score=202.63 Aligned_cols=220 Identities=22% Similarity=0.426 Sum_probs=165.4
Q ss_pred CCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEe-CCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEE
Q psy7036 7 FAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFR-GETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYK 85 (254)
Q Consensus 7 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 85 (254)
.+|.|...+....+.+|+.++|.|.+.+.|. .+.|++ ++..+....+..+... + ....|.|.+++..|+|.|+
T Consensus 3 ~~p~v~~~~~~~~v~~G~~v~l~C~~~~~p~-~v~W~~~~g~~~~~~~~~~~~~~--~---~~~~L~i~~~~~~D~G~Y~ 76 (291)
T 2wim_A 3 ALLQVTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKE--G---VRSRLTIYNANIEDAGIYR 76 (291)
T ss_dssp CCCEEEESCSEEEEETTCCEEEEEEEESCCS-EEECBCTTCCBCCCBTTEEEEEE--T---TEEEEEECSCCGGGCEEEE
T ss_pred CCceEEEeccceEecCCCcEEEEEEEeCCCC-ceEEECCCCcCccCCCcEEEecC--C---CEEEEEEccCCcccCEEEE
Confidence 4789999999999999999999999988764 899999 6776665555444322 1 2348999999999999999
Q ss_pred EEEEcCCCce-EEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEc
Q psy7036 86 VKAKNKMGEV-AASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSID 164 (254)
Q Consensus 86 C~~~~~~~~~-~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~ 164 (254)
|.+.+..|.. ...+.|.|. .++.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+......++...
T Consensus 77 C~~~n~~g~~~~~~~~l~v~------~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~ 150 (291)
T 2wim_A 77 CQATDAKGQTQEATVVLEIY------QKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAML 150 (291)
T ss_dssp EEEECSSSCEEEEEEEEEEE------CCCBCCSCCCSEEEETTSCEEECCCCBCSSCCEEEEECC----CBCCCSSEEEC
T ss_pred EEEecccCceEEEEEEEEec------CCcceEeCCCChhhcCCCCEEEEEEEccCCCCEEEEEECCccccccCCceEEEc
Confidence 9999988765 346667765 344444455566788999999999999999999999999988765444444444
Q ss_pred CCCCceeeEEEEccCCCCCceeEEEEEEcCCCcc--eEEEEEEEecCCCCCCCCCCCCeeecCCc--cccccCCCCcEEE
Q psy7036 165 KDGHSYFASLEIIDVTIEDAGKYKVTAKNELGES--NATISLNFDSDDAPVPGEGTKPVFTERPV--TKQSDDDLNDIVI 240 (254)
Q Consensus 165 ~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~p~~~~~~~--~~~~~~g~~~~~l 240 (254)
.++ .|.|.++..+|.|.|+|.+.|..+.. ...+.+.+.. +|.+...+. ...+.+|+ .+.|
T Consensus 151 ~~~-----~L~i~~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~----------~p~~~~~~~~~~~~~~~g~-~~~l 214 (291)
T 2wim_A 151 ANN-----NLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNV----------PPAISMPQKSFNATAERGE-EMTF 214 (291)
T ss_dssp TTS-----CEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEB----------CCCCBCSCSEEECCSSSCC-EEEE
T ss_pred cCC-----CEEEEecchhhCEEEEEEEEECCCCeeEEeeEEEEecc----------CCccccCcccccceecCCC-eEEE
Confidence 444 69999999999999999999987543 3445555553 333333322 44677888 9999
Q ss_pred EEEEeccCCCceeC
Q psy7036 241 ECRLVGEPEPTISW 254 (254)
Q Consensus 241 ~C~~~~~p~p~~~W 254 (254)
.|.+.|.|.|.++|
T Consensus 215 ~C~~~g~p~p~v~W 228 (291)
T 2wim_A 215 SCRASGSPEPAISW 228 (291)
T ss_dssp ECBCCCBSCCEEEE
T ss_pred EEEeecCCCCeEEE
Confidence 99999999999998
No 7
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=100.00 E-value=1e-32 Score=214.83 Aligned_cols=227 Identities=22% Similarity=0.406 Sum_probs=175.4
Q ss_pred CCCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCc-ceEEEeecCCcceEEEEEEeccCCCCCeE
Q psy7036 5 EDFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTR-TVMKTTPIGTNKYLVALELDDVIETDAGL 83 (254)
Q Consensus 5 ~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 83 (254)
+..+|.+...+....+.+|+++.|.|.+.+.|.+.+.|++++..+..... ........+ .|.|.+++..|+|.
T Consensus 118 v~~p~~~~~~~~~~~~~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~------~L~i~~~~~~d~G~ 191 (403)
T 3laf_A 118 VAGPLRFLSQTESITAFMGDTVLLKCEVIGDPMPTIHWQKNQQDLNPIPGDSRVVVLPSG------ALQISRLQPGDSGV 191 (403)
T ss_dssp ECCCCEECSCCCCEEEETTSCEEECCCEECSSCCEEEEEESSSBCCCCTTCCSEEECTTS------CEEECSCCGGGCEE
T ss_pred ecCCCccccCCCcEEEEcCCeEEEEEEEcccCCCeEEEEECCEeccccCCceEEEEcCCc------eEEEcccccccCEE
Confidence 34567777788888899999999999999889999999999987743222 122222122 69999999999999
Q ss_pred EEEEEEcCCCce-EEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEE
Q psy7036 84 YKVKAKNKMGEV-AASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFS 162 (254)
Q Consensus 84 Y~C~~~~~~~~~-~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~ 162 (254)
|+|.+.|..+.. .....+.|...+....++.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+........
T Consensus 192 Y~C~~~n~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~- 270 (403)
T 3laf_A 192 YRCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCVSGYPPPSFTWLRGEEVIQLRSKKYS- 270 (403)
T ss_dssp EEEEEECSSCCCBCCCEEEEEECCCCCCEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCSSSSEE-
T ss_pred EEEEEEcCCCceeccceeEEEecCCCcccCceEecCCCceEecCCCcEEEEEEcCCCCCCeEEEEECCeeccCCCceEE-
Confidence 999999987653 345666665322211112233445556778999999999999999999999999988765443322
Q ss_pred EcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEE
Q psy7036 163 IDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIEC 242 (254)
Q Consensus 163 ~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C 242 (254)
...+. .|.|.++..+|.|.|+|.+.|..|.....+.+.|.. +|.+...+....+.+|+ .+.|.|
T Consensus 271 ~~~~~-----~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~----------~p~~~~~~~~~~~~~g~-~v~l~C 334 (403)
T 3laf_A 271 LLGGS-----NLLISNVTDDDSGTYTCVVTYKNENISASAELTVLV----------PPWFLNHPSNLYAYESM-DIEFEC 334 (403)
T ss_dssp EETTT-----EEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEE----------EEEEEECCCCEECCTTC-CEEECC
T ss_pred ECCcc-----EEEEeCCCHHHCEEEEEEEEcCCCceEEEEEEEEEC----------CCcEeecCcceEEecCC-eEEEEE
Confidence 22232 799999999999999999999999888888888874 67777777777888999 999999
Q ss_pred EEeccCCCceeC
Q psy7036 243 RLVGEPEPTISW 254 (254)
Q Consensus 243 ~~~~~p~p~~~W 254 (254)
.+.|.|.|.++|
T Consensus 335 ~~~g~p~p~v~W 346 (403)
T 3laf_A 335 AVSGKPVPTVNW 346 (403)
T ss_dssp EEEEESCCEEEE
T ss_pred EEeeccCCEEEE
Confidence 999999999998
No 8
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=100.00 E-value=4e-31 Score=212.50 Aligned_cols=224 Identities=16% Similarity=0.236 Sum_probs=171.5
Q ss_pred CCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCc-eEEEeCCEEe--eeCCcceEEEeecCCcceEEEEEEeccCCCCCe
Q psy7036 6 DFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPD-IVWFRGETQL--SEDTRTVMKTTPIGTNKYLVALELDDVIETDAG 82 (254)
Q Consensus 6 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~-v~W~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G 82 (254)
..+|.|...+....+.+|++++|.|.+.+.|.+. ++|++++..+ ..... ..............|.|.+++..|+|
T Consensus 209 ~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~~i~W~~~~~~~~~~~~~~--~~~~~~~~~~~~~~L~I~~~~~~D~G 286 (524)
T 2ec8_A 209 KAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYN--SWHHGDFNYERQATLTISSARVNDSG 286 (524)
T ss_dssp CSCCEEECSCSEEEEETTSCEEEEEEEEESSTTCEEEEEETTCSCCCCEEEE--EEECSSSCEEEEEEEEESSCCTTTCE
T ss_pred CCCCcEEecCCcceEEcCCcEEEEEEEecCCCcEEEEEEeCCCCCccccccc--cccccCCccceEEEEEECCCCHHHCE
Confidence 4688998888888999999999999999988876 9999999873 22211 11111112233458999999999999
Q ss_pred EEEEEEEcCCCceEEEEEEEEeccccCCCCCcccc---CCCeeeecCCCeEEEEEEEeeCCCCe-EEEEECCEecccCCc
Q psy7036 83 LYKVKAKNKMGEVAASINLNFSREQIDGLAPTFLK---KPSIRQEDDGKRLLFECRIQADPAPT-VIWSHSGVQVKEDKR 158 (254)
Q Consensus 83 ~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~---~~~~~~~~~g~~~~l~C~~~~~~~~~-~~W~~~~~~~~~~~~ 158 (254)
.|+|.+.|..|.....+.|.|.. +|.+.. ......+..|+.+.|.|.+.+.|.+. +.|++++..+.....
T Consensus 287 ~Y~C~a~n~~g~~~~~~~l~V~~------~p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~~v~W~k~g~~~~~~~~ 360 (524)
T 2ec8_A 287 VFMCYANNTFGSANVTTTLEVVD------KGFINIFPMINTTVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWE 360 (524)
T ss_dssp EEEEEEECSSCEEEEEEEEEEES------SCEEEEEESSCSEEEECTTCCEEEEEEEEEESCCCEEEEESSSCBCSSSBC
T ss_pred EEEEEEEecCCceEEEEEEEEec------cCceEeecCCCceEEEcCCCcEEEEEEEeecCCCcEEEEEECCeeccCCcc
Confidence 99999999999888888888873 333332 22357788999999999999999998 999999988765543
Q ss_pred ceEEEcCC-CCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCc
Q psy7036 159 HKFSIDKD-GHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLND 237 (254)
Q Consensus 159 ~~~~~~~~-~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~ 237 (254)
.......+ .....+.|.|.+++.+|.|.|+|.|.|..|....++.|.|.. +|.+...+. ..+|
T Consensus 361 ~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~----------~P~i~~~~~---~~~g--- 424 (524)
T 2ec8_A 361 DYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVNAAIAFNVYVNT----------KPEILTYDR---LVNG--- 424 (524)
T ss_dssp CEESCCSSSCCEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECE----------EEEEEEEEC---CSSS---
T ss_pred ceeEEccCCCceeEEEEEEeecCcccCeEEEEEEEecCceEEEEEEEEEec----------CCeEeeccc---CcCc---
Confidence 22212111 122446899999999999999999999999988888888864 566665443 2222
Q ss_pred EEEEEEEeccCCCceeC
Q psy7036 238 IVIECRLVGEPEPTISW 254 (254)
Q Consensus 238 ~~l~C~~~~~p~p~~~W 254 (254)
.|.|.+.|+|.|.++|
T Consensus 425 -~l~C~~~g~P~p~i~W 440 (524)
T 2ec8_A 425 -MLQCVAAGFPEPTIDW 440 (524)
T ss_dssp -CEEEEEEEESCCEEEC
T ss_pred -EEEEEEEeecCCEEEE
Confidence 9999999999999999
No 9
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=100.00 E-value=2.3e-33 Score=211.78 Aligned_cols=234 Identities=20% Similarity=0.346 Sum_probs=163.2
Q ss_pred CCCCCCCCeeEeCCCceeecCCCeEEEEEEEeeC-CCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCC
Q psy7036 2 GIAEDFAPSFTQKPQLRQEDEGNRLIFECQLLCN-PKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETD 80 (254)
Q Consensus 2 ~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~-~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d 80 (254)
|+.+-.+|.|...+ ...+.+|++++|.|.+.+. |.+.+.|+|+|..+....++.+. .....|.|.+++..|
T Consensus 1 gi~~~~~P~~~~~~-~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~-------~~~~~L~i~~~~~~d 72 (317)
T 2y25_A 1 GIDPFTGPHFVEYL-SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFK-------DGICTLLITEFSKKD 72 (317)
T ss_dssp -CCSSSCCEEEEEE-EEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCSCC------------CCEEEEETTCCSTT
T ss_pred CCCccCCCcEeeee-eEEECCCCeEEEEEEEcCCCCCCEEEEEECCeEcCCCCcEEEE-------CCeEEEEEccCCccc
Confidence 45666789998554 5889999999999999876 77899999999998766554432 112389999999999
Q ss_pred CeEEEEEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEee----------CCCCeEEEEECC
Q psy7036 81 AGLYKVKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQA----------DPAPTVIWSHSG 150 (254)
Q Consensus 81 ~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~----------~~~~~~~W~~~~ 150 (254)
+|.|+|.+.|..+.....+.|.|.. ++.+........+..|+.+.|.|.+.+ .|.+.+.|++++
T Consensus 73 ~G~Y~C~~~n~~g~~~~~~~l~v~~------~~~~~~~~~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~ 146 (317)
T 2y25_A 73 AGIYEVILKDDRGKDKSRLKLVDEA------FKELMMEVCKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNG 146 (317)
T ss_dssp CSCEEEEEESSSCEEEEEECCSTHH------HHHHHHHHHHHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESS
T ss_pred CeEEEEEEECCCCcEEEEEEEEEec------CccccccCCceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECC
Confidence 9999999999888766665555432 111111111223345556666666554 688899999999
Q ss_pred EecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEecC-----------CCCCCCCCCC
Q psy7036 151 VQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDSD-----------DAPVPGEGTK 219 (254)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~~-----------~~~~~~~~~~ 219 (254)
..+............. ...|.|.+++.+|.|.|+|.+.|..|....++.+.+... .+.......+
T Consensus 147 ~~~~~~~~~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p 222 (317)
T 2y25_A 147 SAIRYSDRVKTGVTGE----QIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRA 222 (317)
T ss_dssp SBCCCCSSEEEEECSS----EEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHHHHTTTSC
T ss_pred EECCCCCCeEEeccCC----EEEEEECcCCcccCeeEEEEEEeCCceEEEEEEEeeeeccccchhhcccCCcccCcCCCC
Confidence 8887655444333222 236999999999999999999999888877777665310 0000001112
Q ss_pred CeeecCCccccccCCCCcEEEEEEEeccCCCceeC
Q psy7036 220 PVFTERPVTKQSDDDLNDIVIECRLVGEPEPTISW 254 (254)
Q Consensus 220 p~~~~~~~~~~~~~g~~~~~l~C~~~~~p~p~~~W 254 (254)
+.+...+....+.+|+ .+.|.|.+.|+|.|.+.|
T Consensus 223 ~~~~~~~~~~~v~~g~-~~~l~C~~~g~p~p~i~W 256 (317)
T 2y25_A 223 RVLGGLPDVVTIQEGK-ALNLTCNVWGDPPPEVSW 256 (317)
T ss_dssp EEEEBCCSEEEEETTS-BBCEEEEEECSSCCEEEE
T ss_pred cccccCCccEEEEcCC-EEEEEEEEecCCCCEEEE
Confidence 3333345666788899 999999999999999998
No 10
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=100.00 E-value=5.1e-31 Score=185.17 Aligned_cols=189 Identities=26% Similarity=0.428 Sum_probs=150.8
Q ss_pred CCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCC--cceEEEeecCCcceEEEEEEeccCCCCCeE
Q psy7036 6 DFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDT--RTVMKTTPIGTNKYLVALELDDVIETDAGL 83 (254)
Q Consensus 6 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 83 (254)
..+|.|...+....+.+|++++|.|.+.+.|.+.+.|++++..+.... +...... + ....|.|.+++..|+|.
T Consensus 3 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~--~---~~~~L~i~~~~~~d~G~ 77 (194)
T 2a38_A 3 TQAPTFTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFS--D---GRAKLTIPAVTKANSGR 77 (194)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEEE--T---TEEEEEESSCCGGGCEE
T ss_pred CCCCeEEccCCceEEECCCEEEEEEEEEecCCCEEEEEECCEEcccccCCceEEEeC--C---CEEEEEECCCCcccCEE
Confidence 347899999999999999999999999998999999999998876553 2333221 1 23489999999999999
Q ss_pred EEEEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEE
Q psy7036 84 YKVKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSI 163 (254)
Q Consensus 84 Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~ 163 (254)
|+|.+.+..+.......|.|... ..+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+..........
T Consensus 78 Y~C~~~n~~~~~~~~~~l~v~~~---~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~ 154 (194)
T 2a38_A 78 YSLKATNGSGQATSTAELLVKAE---TAPPNFVQRLQSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQSSLDFQISQ 154 (194)
T ss_dssp EEEEEEETTEEEEEEEEEEEECC---CEEEEEEECCCCEEECTTEEEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEE
T ss_pred EEEEEEcCCceEeEEEEEEEccC---CCCCEEEeCCccEEEcCCCEEEEEEEEEEecCCeEEEEECCEECCCCCcEEEEE
Confidence 99999998888777777777631 134444555556778899999999999999999999999999887655544433
Q ss_pred cCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEE
Q psy7036 164 DKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNF 206 (254)
Q Consensus 164 ~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v 206 (254)
... ...|.|.++..+|.|.|+|.|.|..|....++.|.|
T Consensus 155 ~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 193 (194)
T 2a38_A 155 EGD----LYSLLIAEAYPEDSGTYSVNATNSVGRATSTAELLV 193 (194)
T ss_dssp ETT----EEEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred cCC----EEEEEECCCChhcCeEEEEEEEeCCCceEEEEEEEE
Confidence 222 137999999999999999999999998888887776
No 11
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.98 E-value=2.8e-30 Score=181.89 Aligned_cols=192 Identities=22% Similarity=0.379 Sum_probs=150.6
Q ss_pred CCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCC-cceEEEeecCCcceEEEEEEeccCCCCCeEEE
Q psy7036 7 FAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDT-RTVMKTTPIGTNKYLVALELDDVIETDAGLYK 85 (254)
Q Consensus 7 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 85 (254)
.+|.|...+....+.+|++++|.|.+.+.|.+.+.|++++..+.... ++.+... . ...+.|.|.+++..|+|.|+
T Consensus 3 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~-~---~~~~~L~i~~~~~~d~G~Y~ 78 (197)
T 2j8h_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEF-K---GGYHQLIIASVTDDDATVYQ 78 (197)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEE-T---TTEEEEEECSCCGGGCSEEE
T ss_pred CCCEEEEcCCccEEcCCCEEEEEEEEeecCCCEEEEEECCEECccCCCcEEEEEc-C---CCEEEEEECcCCHHhCEEEE
Confidence 58999999999999999999999999989999999999999886543 3332221 1 12347999999999999999
Q ss_pred EEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcC
Q psy7036 86 VKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDK 165 (254)
Q Consensus 86 C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~ 165 (254)
|.+.|..+.....+.|.|...+.... +.....+....+..|+.+.|.|.+.+.|.+.+.|++++..+.......+....
T Consensus 79 C~~~n~~g~~~~~~~l~V~~~p~~~~-~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~ 157 (197)
T 2j8h_A 79 VRATNQGGSVSGTASLEVEVPAKIHL-PKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTR 157 (197)
T ss_dssp EEEEETTEEEEEEEEEEEEEEEEECC-SSCBTTBEEEEEETTCCCEEEEEEEEESCCEEEEEESSCEECSSSSCEEEECS
T ss_pred EEEEECCCceeEEEEEEEcCCCcCCC-CccccccCeEEEeCCCEEEEEEEEEecCCCcEEEEECCEEeecCCCEEEEEcC
Confidence 99999988877888888864333222 22222334566788999999999999999999999999988755544443322
Q ss_pred CCCceeeEEEEcc-CCCCCceeEEEEEEcCCCcceEEEEEEEe
Q psy7036 166 DGHSYFASLEIID-VTIEDAGKYKVTAKNELGESNATISLNFD 207 (254)
Q Consensus 166 ~~~~~~~~l~i~~-~~~~d~G~y~C~~~~~~~~~~~~~~~~v~ 207 (254)
. ...|.|.+ +..+|.|.|+|.|.|..|....++.|.|.
T Consensus 158 ~----~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 196 (197)
T 2j8h_A 158 S----FTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVA 196 (197)
T ss_dssp S----EEEEECTTCCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred C----ceEEEEeCCCCcccCEeEEEEEEeCCCcEeEEEEEEEe
Confidence 2 23799999 99999999999999999998888888774
No 12
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.98 E-value=5.4e-32 Score=206.18 Aligned_cols=229 Identities=18% Similarity=0.267 Sum_probs=171.7
Q ss_pred CCCCCCeeEeCCCceeecCCCeEEEEEEEe-------eCCCCceEEEeCCEEe--eeCCcceEEEeecCCcceEEEEEEe
Q psy7036 4 AEDFAPSFTQKPQLRQEDEGNRLIFECQLL-------CNPKPDIVWFRGETQL--SEDTRTVMKTTPIGTNKYLVALELD 74 (254)
Q Consensus 4 ~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~-------~~~~~~v~W~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~i~ 74 (254)
.....|.|...+....+.+|+++.|.|.+. +.|.+.+.|++++..+ ......++.. ..+ .|.|.
T Consensus 14 ~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~-~~~------~L~i~ 86 (339)
T 3o4o_C 14 AARSCRFRGRHYKREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWA-QDG------ALWLL 86 (339)
T ss_dssp ----CEEEEECSCCEEEETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSCCSSSCEEE-ETT------EEEES
T ss_pred cchhhHhhCcCceEEEEECCccEEEEeccccccccccCCCCceEEEEECCCCcccCccccccEEe-eCC------eEEEC
Confidence 345689999999999999999999999997 7888999999999873 3322333322 111 79999
Q ss_pred ccCCCCCeEEEEEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEE-----EeeCCCCeEEEEEC
Q psy7036 75 DVIETDAGLYKVKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECR-----IQADPAPTVIWSHS 149 (254)
Q Consensus 75 ~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~-----~~~~~~~~~~W~~~ 149 (254)
+++..|+|.|+|.+.|..+.....+.|.|...... ..........+..|+.+.|.|. +.+.|.+.+.|+++
T Consensus 87 ~v~~~D~G~Y~C~~~n~~g~~~~~~~l~V~~~~~~----~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~ 162 (339)
T 3o4o_C 87 PALQEDSGTYVCTTRNASYCDKMSIELRVFENTDA----FLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKD 162 (339)
T ss_dssp SBCTTCCEEEECCEEETTEEEEEEEEEEEECSCGG----GHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEES
T ss_pred CCCcccCEEEEEEEECCcceEEEEEEEEEEcCCCc----cccccccceEEECCCCEEEEecCCcccccCCCCceEEEecC
Confidence 99999999999999998888888888888642110 0011122346778999999999 77888999999999
Q ss_pred CEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCc----ceEEEEEEEecCCCCCCCCCCCCeeecC
Q psy7036 150 GVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGE----SNATISLNFDSDDAPVPGEGTKPVFTER 225 (254)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~----~~~~~~~~v~~~~~~~~~~~~~p~~~~~ 225 (254)
+..+...... +....+. ..|.|.+++.+|.|.|+|.+.|..+. ....+.|.|..... ..+|.+...
T Consensus 163 g~~~~~~~~~-~~~~~~~----~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~-----~~~P~i~~~ 232 (339)
T 3o4o_C 163 SLLLDKDNEK-FLSVRGT----THLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKE-----ETIPVIISP 232 (339)
T ss_dssp SCBCCTTCSS-EEECTTS----SEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCCC-----CCCCEECCC
T ss_pred CeeCCCCCce-eEEcCCc----ceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCC-----CCCCEEecC
Confidence 9887654332 2232222 17999999999999999999998773 45567777764321 135677777
Q ss_pred CccccccCCCCcEEEEEEE---eccC-CCceeC
Q psy7036 226 PVTKQSDDDLNDIVIECRL---VGEP-EPTISW 254 (254)
Q Consensus 226 ~~~~~~~~g~~~~~l~C~~---~~~p-~p~~~W 254 (254)
+....+.+|+ .+.|.|.+ .|.| .+.++|
T Consensus 233 ~~~~~v~~G~-~v~L~C~~~~~~g~P~~~~v~W 264 (339)
T 3o4o_C 233 LKTISASLGS-RLTIPCKVFLGTGTPLTTMLWW 264 (339)
T ss_dssp SCCCCCCCCS-CCCCCCCEEESSSCCSSCEEEE
T ss_pred CceeEeccCC-CEEEEEEEECCCCCCCCceEEE
Confidence 7777888999 99999999 8998 778888
No 13
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.97 E-value=1.2e-32 Score=209.41 Aligned_cols=233 Identities=18% Similarity=0.361 Sum_probs=96.7
Q ss_pred CCCCCCCCeeEeCCCceeecCCCeEEEEEEEeeC-CCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCC
Q psy7036 2 GIAEDFAPSFTQKPQLRQEDEGNRLIFECQLLCN-PKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETD 80 (254)
Q Consensus 2 ~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~-~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d 80 (254)
|-....++-....+....+.+|++++|.|.+.+. |.+.+.|+|+|..+....++... ...|.|.+++..|
T Consensus 2 g~~~~~p~p~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~---------~~~L~i~~v~~~D 72 (334)
T 1ry7_B 2 GRAAEVPGPEPGQQEQLVFGSGDAVELSCPPPGGGPMGPTVWVKDGTGLVPSERVLVG---------PQRLQVLNASHED 72 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CccccCCCCCCCCcCcEEEecCCcEEEEeeCCCCCCCcceEEEECCeeCCCcccEEec---------cceEEEeeccccc
Confidence 3333433333344778889999999999999875 67899999999988665444321 1279999999999
Q ss_pred CeEEEEEEEcCCCceEEEEEEEEeccccCC----------------CCCcccc----CCCeeeecCCCeEEEEEEEeeCC
Q psy7036 81 AGLYKVKAKNKMGEVAASINLNFSREQIDG----------------LAPTFLK----KPSIRQEDDGKRLLFECRIQADP 140 (254)
Q Consensus 81 ~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~----------------~~~~~~~----~~~~~~~~~g~~~~l~C~~~~~~ 140 (254)
+|.|+|.+.|. +.....+.|.|....... .+|.+.. ......+..|+.+.|.|.+.+.|
T Consensus 73 ~G~Y~C~a~n~-~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p 151 (334)
T 1ry7_B 73 SGAYSCRQRLT-QRVLCHFSVRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNP 151 (334)
T ss_dssp -----------------------------------------------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSS
T ss_pred CEEEEEEEEeC-CeEEEEEEEEEeccCccccccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEccCCC
Confidence 99999999988 766667777775422110 1232221 12235677899999999999999
Q ss_pred CCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEecCCCCCCCCCCCC
Q psy7036 141 APTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDSDDAPVPGEGTKP 220 (254)
Q Consensus 141 ~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p 220 (254)
.+.+.|++++..+.............+. ..|.|.+++.+|.|.|+|.+.|..|.....+.+.|....+ .+|
T Consensus 152 ~~~v~W~~~~~~~~~~~~~~~~~~~~~~---~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~------~~p 222 (334)
T 1ry7_B 152 TPSISWLKNGREFRGEHRIGGIKLRHQQ---WSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSP------HRP 222 (334)
T ss_dssp CCEEECCBTTBCCCTTSSTTCCCCCTTT---TEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECCCC------SSC
T ss_pred CCeEEEEECCEECcccccccceecccce---EEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecCCC------CCC
Confidence 9999999999887654332111111111 2799999999999999999999998888888888875322 133
Q ss_pred eeec-CCccccccCCCCcEEEEEEEeccCCCceeC
Q psy7036 221 VFTE-RPVTKQSDDDLNDIVIECRLVGEPEPTISW 254 (254)
Q Consensus 221 ~~~~-~~~~~~~~~g~~~~~l~C~~~~~p~p~~~W 254 (254)
.+.. .+....+.+|+ .+.|.|.+.|+|.|.++|
T Consensus 223 ~~~~~~~~~~~~~~G~-~v~l~C~~~g~p~p~v~W 256 (334)
T 1ry7_B 223 ILQAGLPANQTAVLGS-DVEFHCKVYSDAQPHIQW 256 (334)
T ss_dssp BCCTTCSCCEEEESSC-CEEECCCCBCSSCEEEEE
T ss_pred ceEecCCCceEEeCCC-CEEEEEEEecCCCCeEEE
Confidence 3432 34566778899 999999999999999998
No 14
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.97 E-value=1e-29 Score=178.95 Aligned_cols=192 Identities=22% Similarity=0.351 Sum_probs=151.9
Q ss_pred CCCCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeE
Q psy7036 4 AEDFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGL 83 (254)
Q Consensus 4 ~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 83 (254)
.+..+|.|...+....+.+|+++.|.|.+.+.|.+.+.|++++..+....+..+... + ....|.|.+++..|+|.
T Consensus 3 ~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~--~---~~~~L~i~~~~~~d~G~ 77 (197)
T 3lcy_A 3 MSGEAPGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSD--G---RTHTLTVMTEEQEDEGV 77 (197)
T ss_dssp CCCEEEEEEECCCCEEEETTSEEEEEEEEEEESCCEEEEEETTEEECCCSSEEEEES--S---SEEEEEEECCSGGGCEE
T ss_pred ccCCCCcccccCCceEEeCCCcEEEEEEEecCCCCEEEEEECCEECCCCccEEEEeC--C---CEEEEEEecCCccCCEE
Confidence 456789999999999999999999999999889999999999999876665544322 1 23479999999999999
Q ss_pred EEEEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEE
Q psy7036 84 YKVKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSI 163 (254)
Q Consensus 84 Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~ 163 (254)
|+|.+.+..+.......|.|...+... + .........+..|+.+.|.|.+.+.|.+.+.|++++..+.......+..
T Consensus 78 Y~C~~~n~~~~~~~~~~l~v~~~p~~~--~-~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~ 154 (197)
T 3lcy_A 78 YTCIATNEVGEVETSSKLLLQATPQFH--P-GYPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQNSENITIEN 154 (197)
T ss_dssp EEEEEECSSCEEEEEEEEEEEEEEEEC--T-TSCCCSEEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEE
T ss_pred EEEEEECCCCceeEEEEEEEEcCCCCC--C-CccCCcceeecCCCeEEEEEEEeeeeCCeeEEeECCEECCCCCceEEEE
Confidence 999999988887777888776422111 0 0112344567789999999999999999999999999887655544433
Q ss_pred cCCCCceeeEEEEccCCC-CCceeEEEEEEcCCCcceEEEEEEEe
Q psy7036 164 DKDGHSYFASLEIIDVTI-EDAGKYKVTAKNELGESNATISLNFD 207 (254)
Q Consensus 164 ~~~~~~~~~~l~i~~~~~-~d~G~y~C~~~~~~~~~~~~~~~~v~ 207 (254)
... ...|.|.++.. +|.|.|+|.|.|..|....++.|.|.
T Consensus 155 ~~~----~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 195 (197)
T 3lcy_A 155 TEH----YTHLVMKNVQRKTHAGKYKVQLSNVFGTVDAILDVEIQ 195 (197)
T ss_dssp CSS----EEEEEESSCCHHHHCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred cCC----EEEEEEccccchhhCceEEEEEEcCcCceEEEEEEEEe
Confidence 221 13799999985 89999999999999999888888775
No 15
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.97 E-value=1.3e-30 Score=208.53 Aligned_cols=212 Identities=18% Similarity=0.223 Sum_probs=153.7
Q ss_pred CCCCCeeEeCCCceeecCCCeEEEEEEEe-eCCCCceEEEeCCEEeeeCCcceEEEee-cCCcceEEEEEEeccCCCCCe
Q psy7036 5 EDFAPSFTQKPQLRQEDEGNRLIFECQLL-CNPKPDIVWFRGETQLSEDTRTVMKTTP-IGTNKYLVALELDDVIETDAG 82 (254)
Q Consensus 5 ~~~~p~~~~~~~~~~v~~g~~v~l~C~~~-~~~~~~v~W~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~i~~~~~~d~G 82 (254)
+...|.+ .|....+.+|+++.|.|.+. +.|.+.++|++++..+............ .........|.|.+++.+|+|
T Consensus 226 V~~~p~~--~p~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG 303 (527)
T 3qs9_E 226 LNQTPQT--TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTG 303 (527)
T ss_dssp SSSCCCC--SCCEEEECTTSCEEEEEEEEESSSCCCEEEECSSSCCCGGGEEEEEEEETTTEEEEEEEEEESSCCGGGCE
T ss_pred EeccCcc--CCCceEEeCCCeEEEEEEEccCCCCeEEEEEECCEECCCCceeeeeeeccCcceeeEEEEEEccCCcccCe
Confidence 3344544 56677899999999999996 8899999999999877554332221111 111122346999999999999
Q ss_pred EEEEEEEcCCCceEEEEEEEEeccccCCCCCccccC--CCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcce
Q psy7036 83 LYKVKAKNKMGEVAASINLNFSREQIDGLAPTFLKK--PSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHK 160 (254)
Q Consensus 83 ~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~--~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~ 160 (254)
.|+|.+.|. ....+.|.|.. +|.+... .....+.+|+.+.|.|.+.+.|.|.+.|+|++..+.......
T Consensus 304 ~Y~C~a~N~---~~~~~~L~V~~------~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~ 374 (527)
T 3qs9_E 304 YYTCSSSKH---PSQSALVTIVE------KGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGL 374 (527)
T ss_dssp EEEEEETTE---EEEEEEEEEC--------CEEECCCSCCEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCBC
T ss_pred EEEEEEEeC---CCceEEEEEEc------cCccccccCcccEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCcccc
Confidence 999999987 56677777763 2222221 124567789999999999999999999999999886544311
Q ss_pred EEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEE
Q psy7036 161 FSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVI 240 (254)
Q Consensus 161 ~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l 240 (254)
..+. .|.|.+++.+|+|.|+|.|.|..|....++.|.|.. +|.+...+. ...|
T Consensus 375 ---~~~~-----~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L~V~~----------~P~i~~~~~---------~~~l 427 (527)
T 3qs9_E 375 ---DNGY-----SISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRR----------KPQVLAEAS---------ASQA 427 (527)
T ss_dssp ---SSSS-----EEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC--C----------CCEEEECCC---------CE--
T ss_pred ---cCCc-----EEEEecCCcccCEEEEEEEEeCCCcEEEEEEEEEec----------CCeEEEeCC---------CCEE
Confidence 1122 799999999999999999999999888888888764 666665432 2357
Q ss_pred EEEEeccCCCceeC
Q psy7036 241 ECRLVGEPEPTISW 254 (254)
Q Consensus 241 ~C~~~~~p~p~~~W 254 (254)
.|.+.|+|.|.++|
T Consensus 428 ~C~a~g~P~p~i~W 441 (527)
T 3qs9_E 428 SCFSDGYPLPSWTW 441 (527)
T ss_dssp -EEEECSSCCEEEE
T ss_pred EEEEEEEcCCeEEE
Confidence 99999999999999
No 16
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.97 E-value=1.8e-29 Score=179.72 Aligned_cols=192 Identities=26% Similarity=0.457 Sum_probs=150.4
Q ss_pred CCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEee-eCCcceEEEeecCCcceEEEEEEeccCC-CCCeE
Q psy7036 6 DFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLS-EDTRTVMKTTPIGTNKYLVALELDDVIE-TDAGL 83 (254)
Q Consensus 6 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~i~~~~~-~d~G~ 83 (254)
..+|.|...|....+.+|++++|.|.+.+.|.+.+.|++++..+. ...++.+..... ....|.|.+++. .|+|.
T Consensus 4 ~~pP~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~----~~~~L~i~~v~~~~d~G~ 79 (212)
T 2yd1_A 4 AHPPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPG----GISILRIEPVRAGRDDAP 79 (212)
T ss_dssp -CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCTTSTTEEEEEETT----TEEEEEESSCCTTTTCSE
T ss_pred CCCCEEEcCCCceEEecCCEEEEEEEEccCCCCeEEEEECCEECCCCcceeEEEEcCC----CeEEEEEEecCCCCcCce
Confidence 358999999999999999999999999999999999999999886 333333332211 124899999999 99999
Q ss_pred EEEEEEcCCCc-eEEEEEEEEeccccC-CCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceE
Q psy7036 84 YKVKAKNKMGE-VAASINLNFSREQID-GLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKF 161 (254)
Q Consensus 84 Y~C~~~~~~~~-~~~~~~l~v~~~~~~-~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~ 161 (254)
|+|.+.|..+. ....+.|.|...... ..+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+.......
T Consensus 80 Y~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~- 158 (212)
T 2yd1_A 80 YECVAENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRY- 158 (212)
T ss_dssp EEEEEECSSSCEEEEEEEEEEECTTCSCTTCCEEEECCCCEEEETTCCEEECCEEECSSCCEEEEEETTEECCTTSTTE-
T ss_pred EEEEEEeCCCCeEEeeEEEEEecccCCCCCCCeeEeCCCceEeecCCeEEEEEEeccCCCCeEEEEECCeEcccCCCeE-
Confidence 99999999887 677888888642211 112455555556678889999999999999999999999999886543322
Q ss_pred EEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEE-EEEEEec
Q psy7036 162 SIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNAT-ISLNFDS 208 (254)
Q Consensus 162 ~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~-~~~~v~~ 208 (254)
... ++ .|.|.+++.+|.|.|+|.|.|..|..... +.|.|..
T Consensus 159 ~~~-~~-----~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V~~ 200 (212)
T 2yd1_A 159 SLK-DG-----FLQIENSREEDQGKYECVAENSMGTEHSKATNLYVKV 200 (212)
T ss_dssp EEE-TT-----EEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred Ecc-CC-----eEEEccCChhhCEEEEEEeecCCCceeEEEEEEEEEe
Confidence 222 22 79999999999999999999999987653 6777774
No 17
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.97 E-value=3.7e-29 Score=187.75 Aligned_cols=235 Identities=19% Similarity=0.314 Sum_probs=168.3
Q ss_pred CCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCC-cceEEEeecCCcceEEEEEEeccCCCCCeEE
Q psy7036 6 DFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDT-RTVMKTTPIGTNKYLVALELDDVIETDAGLY 84 (254)
Q Consensus 6 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 84 (254)
..+|.|...|....+.+|++++|.|.+.+.|.+.+.|++++..+.... ++.+.... ...+.|.|.+++..|+|.|
T Consensus 2 ~~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~----~~~~~L~i~~v~~~d~G~Y 77 (305)
T 2nzi_A 2 AMAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFK----GGYHQLIIASVTDDDATVY 77 (305)
T ss_dssp CCCCEEEECCCCEEECTTCCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEET----TTEEEEEESSCCGGGCSEE
T ss_pred CCCCeeeecccceEEeCCCcEEEEEEEeCCCCCeEEEEECCEEcccCCCeEEEEECC----CCEEEEEEccCChhhCeEE
Confidence 358999999999999999999999999999999999999999886543 23222211 1234799999999999999
Q ss_pred EEEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEc
Q psy7036 85 KVKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSID 164 (254)
Q Consensus 85 ~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~ 164 (254)
+|.+.|..|.....+.|.|...+... .+..........+..|+.+.|.|.+.+.|.+.+.|++++..+.......+...
T Consensus 78 ~C~a~n~~g~~~~~~~l~V~~~p~~~-~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~ 156 (305)
T 2nzi_A 78 QVRATNQGGSVSGTASLEVEVPAKIH-LPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVT 156 (305)
T ss_dssp EEEEEETTEEEEEEEEEEECEEEEEC-CCHHHHSSCCEEEETTCCEEEEEEEEEESCCEEEEEESSSBCCSSSSCEEEEC
T ss_pred EEEEEcCCCCccceEEEEEecCCccC-CCccccccccEEecCCCEEEEEEEECCCCCCEEEEEECCEECCCCCcEEEEEc
Confidence 99999998888788888886432221 12222233456677899999999999999999999999988765554444332
Q ss_pred CCCCceeeEEEEcc-CCCCCceeEEEEEEcCCCcceEEEEEEEecCCCCCCCCCCCCeeec-CCcccc------ccCCCC
Q psy7036 165 KDGHSYFASLEIID-VTIEDAGKYKVTAKNELGESNATISLNFDSDDAPVPGEGTKPVFTE-RPVTKQ------SDDDLN 236 (254)
Q Consensus 165 ~~~~~~~~~l~i~~-~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~-~~~~~~------~~~g~~ 236 (254)
.. ...|.|.+ +..+|.|.|+|.|.|..|....++.+.|...+.++ ..+.+.. ....+. ...|+
T Consensus 157 ~~----~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~p----~~~~~~~~~~~~v~l~w~~p~~~g~- 227 (305)
T 2nzi_A 157 RS----FTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVPDPP----RGVKVSDVSRDSVNLTWTEPASDGG- 227 (305)
T ss_dssp SS----EEEEEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEBCCCCC----EEEEEESCCSSCEEEEEECCSCCSB-
T ss_pred CC----ceEEEEecCCccCccEEEEEEEEeCCCceeeEEEEEEecCCCCC----CCceeeeccCCEEEEEEcCCccCCC-
Confidence 22 13799999 99999999999999999998888888887532211 0011111 111111 12344
Q ss_pred cEEEEEEEeccCCCceeC
Q psy7036 237 DIVIECRLVGEPEPTISW 254 (254)
Q Consensus 237 ~~~l~C~~~~~p~p~~~W 254 (254)
...+.|.+.+.+.+...|
T Consensus 228 ~~i~~y~v~~~~~~~~~w 245 (305)
T 2nzi_A 228 SKITNYIVEKCATTAERW 245 (305)
T ss_dssp SCEEEEEEEEEETTSCCE
T ss_pred CceeEEEEEEecCCCCcc
Confidence 566777777776666555
No 18
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.97 E-value=2.3e-29 Score=176.93 Aligned_cols=182 Identities=18% Similarity=0.332 Sum_probs=143.4
Q ss_pred CCeeEeCCCceeecCCCeEEEEEEEe-eCCCCceEEEeCCEEeeeCCc--ceEEEeecCCcce--EEEEEEeccCCCCCe
Q psy7036 8 APSFTQKPQLRQEDEGNRLIFECQLL-CNPKPDIVWFRGETQLSEDTR--TVMKTTPIGTNKY--LVALELDDVIETDAG 82 (254)
Q Consensus 8 ~p~~~~~~~~~~v~~g~~v~l~C~~~-~~~~~~v~W~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~l~i~~~~~~d~G 82 (254)
+|.|...|....+.+|++++|.|.+. +.|.+.+.|++++..+..... .++....++...+ ...|.|.+++..|+|
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 81 (195)
T 2c5d_C 2 ESPFVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTG 81 (195)
T ss_dssp CCSEEECCCCEEECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTCE
T ss_pred CCeeccChhheEEecCCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCCc
Confidence 68899999999999999999999998 899999999999999876532 2332222222222 458999999999999
Q ss_pred EEEEEEEcCCCceEE-EEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCC-eEEEEECCEecccCCcce
Q psy7036 83 LYKVKAKNKMGEVAA-SINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAP-TVIWSHSGVQVKEDKRHK 160 (254)
Q Consensus 83 ~Y~C~~~~~~~~~~~-~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~-~~~W~~~~~~~~~~~~~~ 160 (254)
.|+|.+.+..+.... .+.|.|. .+|.+...+....+.+|+.+.|.|.+.+.|.+ .+.|++++..+......
T Consensus 82 ~Y~C~~~~~~~~~~~~~~~l~V~------~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~- 154 (195)
T 2c5d_C 82 QYQCLVFLGHQTFVSQPGYVGLE------GLPYFLEEPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPGH- 154 (195)
T ss_dssp EEEEEEEETTEEEECCCEEEEEC------CSCEEEECCCCEEECTTCCEEEEEEEECSSCCCEEEEEESSCBSSSSTTS-
T ss_pred EEEEEEEeCCCceecccEEEEEe------cCCeEEcCCCcEEEcCCCEEEEEeECCCCCCCCEEEEEECCEeccCCCCc-
Confidence 999999998765433 3777775 45666666666778899999999999999999 99999999887654332
Q ss_pred EEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcce-EEEEEEE
Q psy7036 161 FSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESN-ATISLNF 206 (254)
Q Consensus 161 ~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~-~~~~~~v 206 (254)
..+ ..|.|.+++ |+|.|+|.|.|..|... ..+.|.|
T Consensus 155 ---~~~-----~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 155 ---GPQ-----RSLHVPGLN--KTSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp ---SCC-----EEEEECCCS--SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred ---CCC-----CeEEEcccc--cCceEEEEEEcCCCceEEEEEEEEE
Confidence 111 379999887 78999999999999875 6777776
No 19
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.97 E-value=2.8e-30 Score=199.85 Aligned_cols=223 Identities=26% Similarity=0.463 Sum_probs=158.5
Q ss_pred CCCCeeEeCCCceee---cCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEecc-CCCCC
Q psy7036 6 DFAPSFTQKPQLRQE---DEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDV-IETDA 81 (254)
Q Consensus 6 ~~~p~~~~~~~~~~v---~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~-~~~d~ 81 (254)
+..|.|...|....+ .+|+.+.|.|.+.|.|.+.++|+|+|..+......++... ++ .|.|.+. +..|+
T Consensus 3 ~~~P~f~~~P~~~~~~~~~eg~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~-~g------~l~i~~~~~~~D~ 75 (384)
T 3kld_A 3 GSGPVFVQEPSHVMFPLDSEEKKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVV-DG------SLLINNPNKTQDA 75 (384)
T ss_dssp CEEEEEEECCCCEEEETTCSCSEEEECCEEEEESCCEEEEEETTEECCC----CEEEE-TT------EEEEESCCHHHHC
T ss_pred CCCCEEEeCCcceEeecCCCCCeEEEEeEecCCCCCEEEEEECCEECcCCCCccEEEE-CC------EEEEcCCCCcccC
Confidence 457899999988776 6899999999999999999999999999865443333321 12 5666665 67899
Q ss_pred eEEEEEEEcCCCceE-EEEEEEEeccccC--------------------CCC----------------------------
Q psy7036 82 GLYKVKAKNKMGEVA-ASINLNFSREQID--------------------GLA---------------------------- 112 (254)
Q Consensus 82 G~Y~C~~~~~~~~~~-~~~~l~v~~~~~~--------------------~~~---------------------------- 112 (254)
|.|+|.|.|..|... ....+.+...... ..+
T Consensus 76 G~Y~C~A~N~~G~~~s~~~~l~v~~~~~~~~~~~~~~~v~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~ 155 (384)
T 3kld_A 76 GTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSYQDNRRFVSQE 155 (384)
T ss_dssp EEEEEEEEETTEEEECCCEEEEEEEECCCSCCCCCCEEEEETCCEEECCCCCSEESCEEEEEEETTEECCCSSSEEECTT
T ss_pred EEEEEEEEcCcccEEecceEEEEecccccccCCCCceeEEcCCCeEEecCCCCCCCCeEEEEEECCCCCEeeccEEEEcC
Confidence 999999998877532 1222222100000 000
Q ss_pred -------------------------------------------------Ccc-ccCCCeeeecCCCeEEEEEEEeeCCCC
Q psy7036 113 -------------------------------------------------PTF-LKKPSIRQEDDGKRLLFECRIQADPAP 142 (254)
Q Consensus 113 -------------------------------------------------~~~-~~~~~~~~~~~g~~~~l~C~~~~~~~~ 142 (254)
|.+ ...+....+.+|+.+.|.|.+.+.|.|
T Consensus 156 ~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~P~p 235 (384)
T 3kld_A 156 TGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPVP 235 (384)
T ss_dssp TCCEEESSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEEEEEECCCEEEEEEEECCSEEEEETTSCEEEEEEEEEESCC
T ss_pred CCcEEEeecCHHHCceEEEEEecccccceeeCCceEEEEccCCcccccCCceeecCCCceEecCCCcEEEEEEEeecCCC
Confidence 000 001122335679999999999999999
Q ss_pred eEEEEECCE-ecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEecCCCCCCCCCCCCe
Q psy7036 143 TVIWSHSGV-QVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDSDDAPVPGEGTKPV 221 (254)
Q Consensus 143 ~~~W~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~ 221 (254)
.+.|++++. .+.... .. ...++ .|.|.+++.+|+|.|+|.|.|..|.......+.|.. +|.
T Consensus 236 ~i~W~k~~~~~~~~~~--~~-~~~~~-----~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~----------~P~ 297 (384)
T 3kld_A 236 TILWRRADGKPIARKA--RR-HKSNG-----ILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYA----------QPN 297 (384)
T ss_dssp EEEEEETTCCCCCTTC--EE-CTTSC-----EEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEE----------EEE
T ss_pred cEEEEeCCCccccccc--ee-cCCCc-----EEEECCCChhhCEEEEEEEEcCCCeEEEEEEEEEec----------CCc
Confidence 999999543 443211 11 12222 799999999999999999999999888888888874 567
Q ss_pred eecCCccccccCCCCcEEEEEEEeccCCCceeC
Q psy7036 222 FTERPVTKQSDDDLNDIVIECRLVGEPEPTISW 254 (254)
Q Consensus 222 ~~~~~~~~~~~~g~~~~~l~C~~~~~p~p~~~W 254 (254)
+...+....+..|+ .+.|.|.+.|.|.|.++|
T Consensus 298 ~~~~~~~~~v~~g~-~v~l~C~~~g~P~p~i~W 329 (384)
T 3kld_A 298 WVQIINDIHVAMEE-SVFWECKANGRPKPTYRW 329 (384)
T ss_dssp EEECCCCEEECTTC-CEEEECEEEEESCCEEEE
T ss_pred cccCCCceEecCCC-CEEEEeECCccCCCeEEE
Confidence 77777777888899 999999999999999999
No 20
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.97 E-value=5.7e-30 Score=188.10 Aligned_cols=200 Identities=19% Similarity=0.266 Sum_probs=154.1
Q ss_pred CCeeEeCCCceeecCCCeEEEEEEEeeCCCC-ceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEE
Q psy7036 8 APSFTQKPQLRQEDEGNRLIFECQLLCNPKP-DIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKV 86 (254)
Q Consensus 8 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 86 (254)
.|.|...|....+.+|+.+.|.|.+.+.+.+ .++|+++|..+..... .|.|.+++..|+|.|+|
T Consensus 1 kP~i~~~p~~~~v~~G~~v~l~C~~~~~~~~~~~~W~~~g~~~~~~~~---------------~l~i~~~~~~d~G~Y~C 65 (262)
T 3rjd_A 1 KAVITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQTSTP---------------SYRITSASVNDSGEYRC 65 (262)
T ss_dssp CCEEEESSCCSEEETTCCEEEEEECSSCCCTTCEEEEETTEECSCCSS---------------EEEESSCCGGGCEEEEE
T ss_pred CCeEecCCCcEEeeCCCeEEEEEECCCCCCCceEEEEECCEEeeccCC---------------eEEEecCCcccCeEEEE
Confidence 4889999999899999999999999888777 8999999998764321 69999999999999999
Q ss_pred EEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEE-eeCCCCeEEEEECCEecccCCcceEEEcC
Q psy7036 87 KAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRI-QADPAPTVIWSHSGVQVKEDKRHKFSIDK 165 (254)
Q Consensus 87 ~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~-~~~~~~~~~W~~~~~~~~~~~~~~~~~~~ 165 (254)
.+.+..+.. .+.|.|.. ++ ....+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+.... .
T Consensus 66 ~~~~~~~s~--~~~l~v~~------~~-~~~~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~~~-------~ 129 (262)
T 3rjd_A 66 QRGLSGRSD--PIQLEIHR------GW-LLLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFFH-------W 129 (262)
T ss_dssp EESSSCCCC--CEEEEEEC------SS-EEEEESCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEEEE-------E
T ss_pred EEecCCccc--cEEEEEec------cc-eEecCCCeEEecCCeEEEEEEccCCCCCceEEEEECCccccccC-------C
Confidence 998766544 45556642 22 2222334457789999999999 677888999999998764221 1
Q ss_pred CCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEe
Q psy7036 166 DGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLV 245 (254)
Q Consensus 166 ~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~ 245 (254)
+ ..|.|.+++.+|.|.|+|.+.|..+.....+.|.|... ..+|.+...+ ...+.+|+ .+.|.|.+.
T Consensus 130 ~-----~~l~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~-------~~~p~~~~~~-~~~~~~g~-~~~l~C~~~ 195 (262)
T 3rjd_A 130 N-----SNLTILKTNISHNGTYHCSGMGKHRYTSAGISVTVKEL-------FPAPVLNASV-TSPLLEGN-LVTLSCETK 195 (262)
T ss_dssp C-----CCEEESSCCGGGCEEEEEEEESSSEEEEECEEEEEECS-------SCCCEEEESS-CSSEETTC-CEEEEEECC
T ss_pred C-----CeEEEEECChhhCEEEEEEEeCCCCccccceEEEeccC-------CCCCeEeecC-ceeecCCC-eEEEEeEcc
Confidence 1 26999999999999999999999877777777877642 1256666655 45677888 999999999
Q ss_pred ccCC-Cce
Q psy7036 246 GEPE-PTI 252 (254)
Q Consensus 246 ~~p~-p~~ 252 (254)
+.|. |.+
T Consensus 196 ~~p~~p~~ 203 (262)
T 3rjd_A 196 LLLQRPGL 203 (262)
T ss_dssp CCCC----
T ss_pred cCCCCCCc
Confidence 9986 553
No 21
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.97 E-value=3.2e-29 Score=178.46 Aligned_cols=197 Identities=23% Similarity=0.387 Sum_probs=147.4
Q ss_pred CCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEecc-CCCCCeEE
Q psy7036 6 DFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDV-IETDAGLY 84 (254)
Q Consensus 6 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~-~~~d~G~Y 84 (254)
..+|.|...|....+.+|+++.|.|.+.|.|.+.+.|++++..+........ ....+ ....|.|.++ +..|+|.|
T Consensus 4 ~~~P~~~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~~~~~~-~~~~~---~~~~L~i~~v~~~~d~G~Y 79 (212)
T 2yd6_A 4 ETPPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVI-EFDDG---SGSVLRIQPLRTPRDEAIY 79 (212)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCTTEEEE-EEGGG---TEEEEEECSCCTTTTCEEE
T ss_pred CCCCeEEeCcceeEEecCCeEEEEEEEeeCCCCEEEEEECCcCCCCCceeEE-EEcCC---CceEEEEeccCCCCCCeEE
Confidence 4578999999999999999999999999999999999999998875433222 22111 1237999999 59999999
Q ss_pred EEEEEcCCCceEEEEEEEEeccccC-CCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCC-cceEE
Q psy7036 85 KVKAKNKMGEVAASINLNFSREQID-GLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDK-RHKFS 162 (254)
Q Consensus 85 ~C~~~~~~~~~~~~~~l~v~~~~~~-~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~-~~~~~ 162 (254)
+|.+.|..+.....+.|.|...... ...|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+.... ..++.
T Consensus 80 ~C~a~n~~g~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~ 159 (212)
T 2yd6_A 80 ECVASNNVGEISVSTRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIK 159 (212)
T ss_dssp EEEEEETTEEEEEEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEEC------CCEE
T ss_pred EEEEEcCCCcEEEEEEEEEeccCccCCCcceeecCCcceeEecCCCEEEEEEecCCCCCeEEEEECCccccCcCCCceEE
Confidence 9999999988888888888643211 123455555556678889999999999999999999999999886542 11222
Q ss_pred EcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcce-EEEEEEEec
Q psy7036 163 IDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESN-ATISLNFDS 208 (254)
Q Consensus 163 ~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~-~~~~~~v~~ 208 (254)
...... .+.|.|.++..+|.|.|+|.|.|..|... ....+.+..
T Consensus 160 ~~~~~~--~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~~a~l~~~~ 204 (212)
T 2yd6_A 160 QLRSES--IGALQIEQSEESDQGKYECVATNSAGTRYSAPANLYVRG 204 (212)
T ss_dssp EEEETT--EEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred EEecCC--eEEEEEcCCCcccCEEEEEEEECCCCccccccccEEEEe
Confidence 211111 24899999999999999999999999763 446666653
No 22
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.97 E-value=1.2e-29 Score=197.47 Aligned_cols=227 Identities=21% Similarity=0.380 Sum_probs=167.9
Q ss_pred CCCCeeEeCCCceeecCCCeEEEEEEEee-CCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEecc-----CCC
Q psy7036 6 DFAPSFTQKPQLRQEDEGNRLIFECQLLC-NPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDV-----IET 79 (254)
Q Consensus 6 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~-----~~~ 79 (254)
.....|...|.+..+.+|++++|.|.+.+ .|.+.+.|+|+|..+......+.....++ .|.|.++ +..
T Consensus 19 ~~~~~~~~~P~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~------~l~i~~~~~~~~~~~ 92 (403)
T 3laf_A 19 RRSLHFVSEPSDAVTMRGGNVLLNCSAESDRGVPVIKWKKDGLILALGMDDRKQQLPNG------SLLIQNILHSRHHKP 92 (403)
T ss_dssp CCSSEEEECCCCEEECTTCCEEECCEEECTTCCCEEEEEETTEECCTTSCTTEEECTTS------CEEECSCCCBTTBCS
T ss_pred ceeEEEEeCCCceEEecCCcEEEEEEcCCCCCCceEEEEECCEECccCCcccEEEecCC------cEEEeeeeccCCCCC
Confidence 34567888999999999999999999976 57788999999999875443333333222 4666666 677
Q ss_pred CCeEEEEEEEcCCCce--EEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCC
Q psy7036 80 DAGLYKVKAKNKMGEV--AASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDK 157 (254)
Q Consensus 80 d~G~Y~C~~~~~~~~~--~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~ 157 (254)
|+|.|+|.+.+..+.. ...+.+.|. .++.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+....
T Consensus 93 D~G~Y~C~~~~~~~~~~~s~~~~l~v~------~p~~~~~~~~~~~~~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~ 166 (403)
T 3laf_A 93 DEGLYQCEASLGDSGSIISRTAKVMVA------GPLRFLSQTESITAFMGDTVLLKCEVIGDPMPTIHWQKNQQDLNPIP 166 (403)
T ss_dssp SCEEEEEEEECGGGCEEECCCEEEEEC------CCCEECSCCCCEEEETTSCEEECCCEECSSCCEEEEEESSSBCCCCT
T ss_pred cceEEEEEEEeCCCccEEEEEEEEEec------CCCccccCCCcEEEEcCCeEEEEEEEcccCCCeEEEEECCEeccccC
Confidence 9999999999654332 334556654 35555666667788899999999999999999999999998775322
Q ss_pred -cceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcc-eEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCC
Q psy7036 158 -RHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGES-NATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDL 235 (254)
Q Consensus 158 -~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~ 235 (254)
........++ .|.|.+++.+|+|.|+|.+.|..+.. .....+.|...+.. ...+.+...+....+.+|+
T Consensus 167 ~~~~~~~~~~~-----~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~l~v~~~p~~----~~~~~~~~~~~~~~~~~g~ 237 (403)
T 3laf_A 167 GDSRVVVLPSG-----ALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGL----HRQLYFLQRPSNVIAIEGK 237 (403)
T ss_dssp TCCSEEECTTS-----CEEECSCCGGGCEEEEEEEECSSCCCBCCCEEEEEECCCCC----CEEEEEEECCCCEEEETTS
T ss_pred CceEEEEcCCc-----eEEEcccccccCEEEEEEEEcCCCceeccceeEEEecCCCc----ccCceEecCCCceEecCCC
Confidence 2223333333 79999999999999999999987753 34566666542211 1123455566667788899
Q ss_pred CcEEEEEEEeccCCCceeC
Q psy7036 236 NDIVIECRLVGEPEPTISW 254 (254)
Q Consensus 236 ~~~~l~C~~~~~p~p~~~W 254 (254)
.+.|.|.+.+.|.|.+.|
T Consensus 238 -~~~l~C~~~~~p~~~~~W 255 (403)
T 3laf_A 238 -DAVLECCVSGYPPPSFTW 255 (403)
T ss_dssp -CEEECCEEEEESCCEEEE
T ss_pred -cEEEEEEcCCCCCCeEEE
Confidence 999999999999999998
No 23
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.97 E-value=7.1e-29 Score=173.81 Aligned_cols=184 Identities=21% Similarity=0.353 Sum_probs=142.8
Q ss_pred CCeeEeCCCceeecCCCeEEEEEEEeeCC-CCceEEEe-CCEEeee-CCcceEEEeecCCcceEEEEEEeccCCCCCeEE
Q psy7036 8 APSFTQKPQLRQEDEGNRLIFECQLLCNP-KPDIVWFR-GETQLSE-DTRTVMKTTPIGTNKYLVALELDDVIETDAGLY 84 (254)
Q Consensus 8 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~-~~~v~W~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 84 (254)
++.|...|....+.+|++++|.|.+.+.+ .+.+.|++ ++..+.. ..++.+... ......|.|.+++..|+|.|
T Consensus 2 p~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~----~~~~~~L~i~~~~~~d~G~Y 77 (191)
T 1epf_A 2 VLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWN----DDDSSTLTIYNANIDDAGIY 77 (191)
T ss_dssp -CCEEEESSSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEE----ETTEEEEEECSCCGGGCEEE
T ss_pred ceEEEecCCCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEEC----CCCceEEEEccCCcccCEEE
Confidence 46788889999999999999999998866 78999999 8887763 333332221 11234899999999999999
Q ss_pred EEEEEcCC-CceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEE
Q psy7036 85 KVKAKNKM-GEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSI 163 (254)
Q Consensus 85 ~C~~~~~~-~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~ 163 (254)
+|.+.+.. +.....+.|.|. .+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+......++..
T Consensus 78 ~C~~~~~~~~~~~~~~~l~v~------~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~ 151 (191)
T 1epf_A 78 KCVVTAEDGTQSEATVNVKIF------QKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIV 151 (191)
T ss_dssp EEEEEETTTEEEEEEEEEEEE------CCSEEEECCSSEECCTTSCEEECCEEECSSCCEEEEEETTEEGGGGCCTTEEE
T ss_pred EEEEEcCCCcceEEEEEEEee------cCceEecCCCcEeecCCCeEEEEEEECCCCCCEEEEEECCEEeeccCCceEEE
Confidence 99999987 455667777775 45555556666778899999999999999999999999999886554444544
Q ss_pred cCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEE
Q psy7036 164 DKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNF 206 (254)
Q Consensus 164 ~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v 206 (254)
..++ .|.|.++..+|.|.|+|.|.|..+.......+.|
T Consensus 152 ~~~~-----~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~i~v 189 (191)
T 1epf_A 152 LSNN-----YLQIRGIKKTDEGTYRCEGRILARGEINFKDIQV 189 (191)
T ss_dssp CTTS-----CEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEE
T ss_pred ecCC-----eEEECCCChhhCEEEEEEEEEecceeEEEEEEEE
Confidence 4444 6999999999999999999998865544444443
No 24
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.97 E-value=6e-29 Score=194.11 Aligned_cols=225 Identities=12% Similarity=0.159 Sum_probs=151.9
Q ss_pred eeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEEEEE
Q psy7036 10 SFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKVKAK 89 (254)
Q Consensus 10 ~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 89 (254)
.++..+..+.|.+|+++.|.|.+.+.|.+.+.|++++..+....... ....+...|.|.+++..|+|.|+|.+.
T Consensus 50 ~~~~~~~~v~V~~G~~v~L~C~v~g~P~p~i~W~~~~~~l~~~~~~~------~~~~~~~sL~I~~v~~~D~G~Y~C~a~ 123 (423)
T 3qs7_E 50 GTVYEAAAVEVDVSASITLQVLVDAPGNISCLWVFKHSSLNCQPHFD------LQNRGVVSMVILKMTETQAGEYLLFIQ 123 (423)
T ss_dssp ------CEEEECSSCCEEEEEECSCCSSCEEEEEETTEEECCCCBC-----------CEEEEEESSCCSSSCSEEEEEEE
T ss_pred cceeccccEEEecCCcEEEEEEEEcCCCCeEEEEECCCccCccceec------cccceEEEEEEeecCcccCEEEEEEEE
Confidence 44556668899999999999999999999999999998765432211 111223379999999999999999999
Q ss_pred cCCCceEEEEEEEEeccccC---------------------C-CCCcc--------------------------------
Q psy7036 90 NKMGEVAASINLNFSREQID---------------------G-LAPTF-------------------------------- 115 (254)
Q Consensus 90 ~~~~~~~~~~~l~v~~~~~~---------------------~-~~~~~-------------------------------- 115 (254)
|..|.....+.|.|...+.. + .+|.+
T Consensus 124 N~~g~~~~~~~l~V~~~p~~~~~~p~~~~~~~~~~L~C~a~G~P~P~i~W~k~~~~~~~~~~~~~~~~~~~~~~l~~~d~ 203 (423)
T 3qs7_E 124 SEATNYTILFTVSIRNTLLYTLRRPYFRKMENQDALVCISESVPEPIVEWVLCDSQGESCKEESPAVVKKEEKVLHELFG 203 (423)
T ss_dssp C--CEEEEEEEEEEC-----CEEEEEEEECSSSSCEEEEEEESSCCEEEEEEC-------------CEEECCSEECCCCS
T ss_pred cCCCcEEEEEEEEEecCccccccCCcEeccCCceEEEEEEeeecCCeEEEEECCCCCccccccccccccccceEEecccC
Confidence 99888777777766510000 0 00000
Q ss_pred ---------------------------ccCCCeeeecCCCeEEEEEEEee-CCCCeEEEEECCEecccCCcceEE-EcCC
Q psy7036 116 ---------------------------LKKPSIRQEDDGKRLLFECRIQA-DPAPTVIWSHSGVQVKEDKRHKFS-IDKD 166 (254)
Q Consensus 116 ---------------------------~~~~~~~~~~~g~~~~l~C~~~~-~~~~~~~W~~~~~~~~~~~~~~~~-~~~~ 166 (254)
...+....+.+|+.+.|.|.+.+ .|.+.+.|++++..+......... ...+
T Consensus 204 G~Y~C~A~N~~G~~~~~~~~l~V~~~p~~~~~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k~g~~l~~~~~~~~~~~~~~ 283 (423)
T 3qs7_E 204 TDIRCCARNELGRECTRLFTIDLNQTPQTTLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTN 283 (423)
T ss_dssp SCEEEEEECSSCEEEEECEEEESSSCCCSSTTEEEEETTSCEEEEEEEEESSSCCCEEEEESSSBCCGGGEEEEEEEETT
T ss_pred eEEEEEEEcCCCCcceeeEEEEEecCCccCCCceEEeCCCeEEEEEEEEcCCCCcEEEEEECCEEccccceeecccccCC
Confidence 00111233557999999999998 677899999999877543221111 1111
Q ss_pred C-CceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEecCCCCCCCCCCCCeeecCC--ccccccCCCCcEEEEEE
Q psy7036 167 G-HSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDSDDAPVPGEGTKPVFTERP--VTKQSDDDLNDIVIECR 243 (254)
Q Consensus 167 ~-~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~--~~~~~~~g~~~~~l~C~ 243 (254)
. ......|.|.+++.+|+|.|+|.|.|. ....+.|.|.. +|.+...+ ....+.+|+ .+.|.|.
T Consensus 284 ~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~---~~~~~~L~V~~----------~p~i~~~~~~~~~~v~~G~-~v~l~C~ 349 (423)
T 3qs7_E 284 RTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTIVE----------KGFINATNSSEDYEIDQYE-EFCFSVR 349 (423)
T ss_dssp TEEEEEEEEEESSCCTTTCEEEEEEETTE---EEEEEEEEEES----------SCEEEEC---CEECCCTTC-CCCEEEE
T ss_pred ceeEEEEEEEEeecCHHHCEEEEEEEecC---CCceEEEEEEe----------CCcceEcCCCccEEecCCC-eEEEEEE
Confidence 1 122347999999999999999999998 66667777764 34444333 345678889 9999999
Q ss_pred EeccCCCceeC
Q psy7036 244 LVGEPEPTISW 254 (254)
Q Consensus 244 ~~~~p~p~~~W 254 (254)
+.|+|.|.++|
T Consensus 350 ~~g~P~p~i~W 360 (423)
T 3qs7_E 350 FKAYPQIRCTW 360 (423)
T ss_dssp EEEESCCEEEE
T ss_pred EEEcCCCeEEE
Confidence 99999999999
No 25
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.97 E-value=1.5e-29 Score=197.05 Aligned_cols=227 Identities=27% Similarity=0.457 Sum_probs=167.1
Q ss_pred CCCCCeeEe-CCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEe----ccCCC
Q psy7036 5 EDFAPSFTQ-KPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELD----DVIET 79 (254)
Q Consensus 5 ~~~~p~~~~-~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~----~~~~~ 79 (254)
...+|.|.. .+....+.+|++++|.|.+.|.|.+.++|+|+|..+......++....... .|.|. +++.+
T Consensus 13 ~~~~P~i~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~-----~l~i~~~~~~~~~~ 87 (404)
T 3p3y_A 13 LTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSG-----TLVIDFRSGGRPEE 87 (404)
T ss_dssp CCCCCCEEEECCTTCEECSSSCCCCCEEECCSSCCEEEEEETTEECCGGGCSSCBCCSSSC-----CCBCCCTTTCCTTS
T ss_pred ccCCCcccccCCccEEEcCCCCEEEEEEecCCCCCeEEEEECCEEeeeecCCcceEecCCc-----eEEEEeccCCCCcc
Confidence 446788875 467778999999999999999999999999999987644332222111111 35553 78899
Q ss_pred CCeEEEEEEEcCCCceE-EEEEEEEeccccC-------------------------------------------------
Q psy7036 80 DAGLYKVKAKNKMGEVA-ASINLNFSREQID------------------------------------------------- 109 (254)
Q Consensus 80 d~G~Y~C~~~~~~~~~~-~~~~l~v~~~~~~------------------------------------------------- 109 (254)
|+|.|+|.+.|..|... ..+.|.|...+..
T Consensus 88 D~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~ 167 (404)
T 3p3y_A 88 YEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQ 167 (404)
T ss_dssp SCEEEEEEEECSSCEEEEEEEEEEECCCCCCCCCCCCCEEEETTSCEEECCCCCCCSSCCEEEEECTTSCBCCCCSSEEE
T ss_pred CCEEEEEEEEcCCCeEeeeeEEEEEeccCccccCCCCCeEEccCCcEEEEeCCCCCCCCCeEEEeCCCccccCCCCcEEE
Confidence 99999999999887753 4566666430000
Q ss_pred -----------------C--------------------------------CCCccccC---CCeeeecCCCeEEEEEEEe
Q psy7036 110 -----------------G--------------------------------LAPTFLKK---PSIRQEDDGKRLLFECRIQ 137 (254)
Q Consensus 110 -----------------~--------------------------------~~~~~~~~---~~~~~~~~g~~~~l~C~~~ 137 (254)
. .+|.+... .....+..|+.+.|.|.+.
T Consensus 168 ~~~~~l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~v~l~C~~~ 247 (404)
T 3p3y_A 168 GHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIAS 247 (404)
T ss_dssp CTTSCEEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEECCSCCCCCCCCBSSSCSSEEEEEEETTSCEEEECCBC
T ss_pred cCCCcEEEEeeeeccCCcceEEEEEeccccceeccCceeEEEeccCCccccCCccccccCCCCCceEecCCCEEEEEEEC
Confidence 0 00000000 0112356789999999999
Q ss_pred eCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEecCCCCCCCCC
Q psy7036 138 ADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDSDDAPVPGEG 217 (254)
Q Consensus 138 ~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 217 (254)
+.|.+.+.|++++..+..... .. ...++ .|.|.++..+|+|.|+|.|.|..|.....+.|.|..
T Consensus 248 g~p~~~v~W~~~~~~~~~~~~-~~-~~~~~-----~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~--------- 311 (404)
T 3p3y_A 248 GVPTPDIAWYKKGGDLPSDKA-KF-ENFNK-----ALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA--------- 311 (404)
T ss_dssp CSSCCEEEEEETTBCCCTTTE-EE-EGGGT-----EEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEE---------
T ss_pred CCCCCcEEEEECCEECCCCcc-cc-cccCc-----eEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEEeC---------
Confidence 999999999999988754432 22 12222 799999999999999999999999888888888875
Q ss_pred CCCeeecCCccccccCCCCcEEEEEEEeccCCCceeC
Q psy7036 218 TKPVFTERPVTKQSDDDLNDIVIECRLVGEPEPTISW 254 (254)
Q Consensus 218 ~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p~p~~~W 254 (254)
+|.+...+....+.+|+ .+.|.|.+.|+|.|.++|
T Consensus 312 -~p~~~~~~~~~~v~~g~-~~~l~C~~~g~p~p~v~W 346 (404)
T 3p3y_A 312 -APYWLDEPKNLILAPGE-DGRLVCRANGNPKPTVQW 346 (404)
T ss_dssp -EEEEEECCCCEEECTTC-CEEEECEEEEESCCEEEE
T ss_pred -CCeeeccCCcceeecCC-cEEEEEEccccCCCceEE
Confidence 67777777778888999 999999999999999998
No 26
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.97 E-value=7.6e-29 Score=173.39 Aligned_cols=179 Identities=21% Similarity=0.387 Sum_probs=138.3
Q ss_pred eeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEe-CCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEEEE
Q psy7036 10 SFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFR-GETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKVKA 88 (254)
Q Consensus 10 ~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 88 (254)
+|...|....+.+|++++|.|.+.+.|. .+.|++ ++..+....+..+... + ....|.|.+++..|+|.|+|.+
T Consensus 4 ~~~~~~~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~~~~~~~~~--~---~~~~L~i~~~~~~d~G~Y~C~~ 77 (189)
T 2v44_A 4 QVTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKE--G---VRSRLTIYNANIEDAGIYRCQA 77 (189)
T ss_dssp EEEESCSEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCCCCSSEEEEEE--T---TEEEEEECSCCGGGCEEEEEEE
T ss_pred EEEecCCceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccCCCceEEEECC--C---CeEEEEEccCCcccCeEEEEEE
Confidence 5677888999999999999999988877 899999 7777766555544322 1 2238999999999999999999
Q ss_pred EcCCCce-EEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCC
Q psy7036 89 KNKMGEV-AASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDG 167 (254)
Q Consensus 89 ~~~~~~~-~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~ 167 (254)
.+..+.. ...+.|.|. .+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+......++....++
T Consensus 78 ~~~~g~~~~~~~~l~v~------~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~ 151 (189)
T 2v44_A 78 TDAKGQTQEATVVLEIY------QKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANN 151 (189)
T ss_dssp ECTTSCEEEEEEEEEEE------CCCEEESCCCSEEEETTSCEEECCEEECSSCCEEEEEEEC--CEECCCTTEEECTTS
T ss_pred EeCCCCcEEEEEEEEEe------cCCceeecCCcEEEeCCCCEEEEEEECcCCCCcEEEEECCcEEeccCCCCEEEecCC
Confidence 9988765 566777776 344554445556788999999999999999999999999988764333444444444
Q ss_pred CceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEE
Q psy7036 168 HSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLN 205 (254)
Q Consensus 168 ~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~ 205 (254)
.|.|.+++.+|.|.|+|.|.|..+.......+.
T Consensus 152 -----~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~~~ 184 (189)
T 2v44_A 152 -----NLQILNINKSDEGIYRCEGRVEARGEIDFRDII 184 (189)
T ss_dssp -----CEEETTCCGGGCEEEEEEEEETTTTEEEEEEEE
T ss_pred -----cEEEEEcCcccCeEEEEEEEccccCceeeeeEE
Confidence 799999999999999999999987654443333
No 27
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.97 E-value=9.9e-29 Score=183.62 Aligned_cols=188 Identities=24% Similarity=0.468 Sum_probs=152.1
Q ss_pred CCCCCeeEeCCC-ceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeE
Q psy7036 5 EDFAPSFTQKPQ-LRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGL 83 (254)
Q Consensus 5 ~~~~p~~~~~~~-~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 83 (254)
+..+|.+...+. ...+.+|+.+.|.|.+.+.|.+.+.|++++..+....+....... ....|.|.+++..|+|.
T Consensus 95 V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~-----~~~~L~i~~~~~~d~G~ 169 (284)
T 2rik_A 95 VQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVE-----SVAVLEMYNLSVEDSGD 169 (284)
T ss_dssp EECCCEEEECCCSEEEEETTCCEEEEEEEESSSCCEEEEEETTEECCCSSSEEEEEET-----TEEEEEECSCCGGGCEE
T ss_pred ccCCCcccccCCCceEecCCceEEEEEEEeeeCCCEEEEEECCEECcCCCcEEEEEcC-----CEEEEEECCCCcccCEE
Confidence 345677665543 456889999999999999999999999999998776655443322 13379999999999999
Q ss_pred EEEEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEE
Q psy7036 84 YKVKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSI 163 (254)
Q Consensus 84 Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~ 163 (254)
|+|.+.|..|.....+.|.|. .+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+.......+..
T Consensus 170 Y~C~a~n~~g~~~~~~~l~V~------~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~ 243 (284)
T 2rik_A 170 YTCEAHNAAGSASSSTSLKVK------EPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMS 243 (284)
T ss_dssp EEEEEECSSCEEEEEEEEEEE------CCCBCCSCCCCEEECTTCCEEEEEECBSSSCCEEEEEETTEEECBTTTEEEEE
T ss_pred EEEEEEcCCCceeEEEEEEEe------cCCcceeCCCcceecCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEE
Confidence 999999999988888888887 45555555666778899999999999999999999999999887665544433
Q ss_pred cCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEe
Q psy7036 164 DKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFD 207 (254)
Q Consensus 164 ~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~ 207 (254)
... .+.|.|.++..+|.|.|+|.|.|..|....++.|.|+
T Consensus 244 ~~~----~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 283 (284)
T 2rik_A 244 ENF----LTSIHILNVDSADIGEYQCKASNDVGSYTCVGSITLK 283 (284)
T ss_dssp ETT----EEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred cCC----EEEEEEcCCCcccCEEEEEEEEeCCCceeEEEEEEEc
Confidence 221 2379999999999999999999999999888888775
No 28
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.97 E-value=2.1e-28 Score=171.26 Aligned_cols=181 Identities=17% Similarity=0.344 Sum_probs=140.4
Q ss_pred CCCeeEeCCCceeecC-CCeEEEEEEEeeCCC--CceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeE
Q psy7036 7 FAPSFTQKPQLRQEDE-GNRLIFECQLLCNPK--PDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGL 83 (254)
Q Consensus 7 ~~p~~~~~~~~~~v~~-g~~v~l~C~~~~~~~--~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 83 (254)
.+|.|...+. ..+.+ |++++|.|.+.+.+. +.+.|++++..+....... ....|.|.+++..|+|.
T Consensus 2 ~~P~i~~~~~-~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~----------~~~~L~i~~~~~~d~G~ 70 (190)
T 2wv3_A 2 NEPRIVTSEE-VIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNA----------SNMEYRINKPRAEDSGE 70 (190)
T ss_dssp -CCEEEECCC-EECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCCBCC----------SEEEEEESSCCGGGCEE
T ss_pred CCCcccccce-EEEccCCceEEEEEEeccCCCCceEEEEEECCEECcccceEe----------ccEEEEEecCCcccCEE
Confidence 4788877554 45656 999999999988776 7899999999886543321 12389999999999999
Q ss_pred EEEEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEE--CCEecccC-Ccce
Q psy7036 84 YKVKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSH--SGVQVKED-KRHK 160 (254)
Q Consensus 84 Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~--~~~~~~~~-~~~~ 160 (254)
|+|.+.|. +.....+.|.|. .+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++ ++..+... ...+
T Consensus 71 Y~C~~~n~-~~~~~~~~l~V~------~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~~~~~ 143 (190)
T 2wv3_A 71 YHCVYHFV-SAPKANATIEVK------AAPDITGHKRSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGR 143 (190)
T ss_dssp EEEEEEET-TEEEEEEEEEEE------CCCEEEEECSEEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEECCCTTSC
T ss_pred EEEEEEeC-CcccccEEEEEe------cCCcccccCCcceeeCCCcEEEEEEeCccCCCceEEEEcCCCceeeeecCCCe
Confidence 99999998 777788888887 45666655666778899999999999999999999999 67665421 1122
Q ss_pred EEEcCCCCceeeEEEEccCC-CCCceeEEEEEEcCCCcceEEEEEEEe
Q psy7036 161 FSIDKDGHSYFASLEIIDVT-IEDAGKYKVTAKNELGESNATISLNFD 207 (254)
Q Consensus 161 ~~~~~~~~~~~~~l~i~~~~-~~d~G~y~C~~~~~~~~~~~~~~~~v~ 207 (254)
+....++. .+.|.|.++. .+|.|.|+|.|.|..|....++.|.|.
T Consensus 144 ~~~~~~~~--~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 144 FFIINKEN--YTELNIVNLQITEDPGEYECNATNSIGSASVSTVLRVR 189 (190)
T ss_dssp EEEEECSS--EEEEEECSCCTTTSCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred EEEecCCC--eeEEEEEeccccCCCEEEEEEEEecCCcceeEEEEEEE
Confidence 22222221 1379999999 799999999999999998888888775
No 29
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.97 E-value=1.9e-28 Score=206.44 Aligned_cols=234 Identities=24% Similarity=0.354 Sum_probs=177.7
Q ss_pred CCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEE
Q psy7036 7 FAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKV 86 (254)
Q Consensus 7 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 86 (254)
.+|.+...+....+.+|+.+.|.|.+.|.|.+.++|+++|..+....+..............+.|.|.+++..|+|.|+|
T Consensus 428 ~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 507 (816)
T 3dmk_A 428 DPPVIRQAFQEETMEPGPSVFLKCVAGGNPTPEISWELDGKKIANNDRYQVGQYVTVNGDVVSYLNITSVHANDGGLYKC 507 (816)
T ss_dssp CCCEEEEECCCEEECSSSCEEEEEEEECSSCCEEEEEETTEECCSCTTEEEEEEECTTSCEEEEEEESSCCTTTCEEEEE
T ss_pred CCCceEecCcceEEcCCCCEEEEEEEecCCCCEEEEEECCEECCCCCCcccccEEecCCCcEEEEEEeeccccCCEEEEE
Confidence 57788887888889999999999999999999999999999987766555433333333445579999999999999999
Q ss_pred EEEcCCCceEEEEEEEEeccccC---------------------------------------------------------
Q psy7036 87 KAKNKMGEVAASINLNFSREQID--------------------------------------------------------- 109 (254)
Q Consensus 87 ~~~~~~~~~~~~~~l~v~~~~~~--------------------------------------------------------- 109 (254)
.+.|..|.......|.|...+..
T Consensus 508 ~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~~~~l~~~~~~~~~~~~~l~i~~v~ 587 (816)
T 3dmk_A 508 IAKSKVGVAEHSAKLNVYGLPYIRQMEKKAIVAGETLIVTCPVAGYPIDSIVWERDNRALPINRKQKVFPNGTLIIENVE 587 (816)
T ss_dssp EEEETTEEEEEEEEEEECSSCEECCCCCEEEETTCCEEEECCEECSSEEEEEEEETTEESCCSTTEEECTTSEEEESSCC
T ss_pred EEEECCCeEEEEEEEEEecCCeeEccCCeEEecCCeEEEEEEecCCCCCEEEEEECCeEcccCCceEEecCCeEEEEecC
Confidence 99999888777777766431000
Q ss_pred ----------------------------CCCCccc-cCCCeeeecCCCeEEEEEEEeeCCCC-eEEEEECCEecccCCcc
Q psy7036 110 ----------------------------GLAPTFL-KKPSIRQEDDGKRLLFECRIQADPAP-TVIWSHSGVQVKEDKRH 159 (254)
Q Consensus 110 ----------------------------~~~~~~~-~~~~~~~~~~g~~~~l~C~~~~~~~~-~~~W~~~~~~~~~~~~~ 159 (254)
..+|.+. .......+..|+.+.|.|.+.+.+.+ .+.|++++..+......
T Consensus 588 ~~~d~G~Y~C~a~n~~g~~~~~~~~v~v~~~p~~~~~~~~~~~~~~G~~v~L~C~~~~~~~~~~i~W~~~g~~l~~~~~~ 667 (816)
T 3dmk_A 588 RNSDQATYTCVAKNQEGYSARGSLEVQVMVLPRIIPFAFEEGPAQVGQYLTLHCSVPGGDLPLNIDWTLDGQAISEDLGI 667 (816)
T ss_dssp HHHHCEEEEEEEEESSSCEEEEEEEEEEECCCCCBCCCCCSSCEESSCEEEEEEBCCCSSSCCEEEEEETTBCCCGGGTC
T ss_pred ccccCEEEEEEEEECCCceeeeeEEEEEecCCccccccccccccCCCCeEEEEEEEeCCCCCCEEEEEECCeEcCCCCCe
Confidence 0000000 00112234579999999998766554 89999999888654443
Q ss_pred eEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEE
Q psy7036 160 KFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIV 239 (254)
Q Consensus 160 ~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~ 239 (254)
........ .+.|.|.++..+|.|.|+|.|.|..|....+..|.|.. +|.+...+....+.+|+ .+.
T Consensus 668 ~~~~~~~~---~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~----------~P~~~~~~~~~~v~~G~-~v~ 733 (816)
T 3dmk_A 668 TTSRVGRR---GSVLTIEAVEASHAGNFTCHARNLAGHQQFTTPLNVYV----------PPRWILEPTDKAFAQGS-DAK 733 (816)
T ss_dssp EEEEETTT---EEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECEEE----------EEEEEECCCCEEEETTC-CEE
T ss_pred eEEEcCCC---eeEEEEccCChhhCEEEEEEEEeCCccEEEEEEEEEEe----------CCceeeecccceecCCC-cEE
Confidence 33222221 24799999999999999999999999988888888874 67787778778888999 999
Q ss_pred EEEEEeccCCCceeC
Q psy7036 240 IECRLVGEPEPTISW 254 (254)
Q Consensus 240 l~C~~~~~p~p~~~W 254 (254)
|.|.+.|+|.|.++|
T Consensus 734 l~C~~~g~P~p~i~W 748 (816)
T 3dmk_A 734 VECKADGFPKPQVTW 748 (816)
T ss_dssp EECEEEEESCCEEEC
T ss_pred EEEEEecCCCCeEEE
Confidence 999999999999999
No 30
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.97 E-value=1.4e-29 Score=179.21 Aligned_cols=187 Identities=17% Similarity=0.303 Sum_probs=135.6
Q ss_pred CCCeeEeCCCceeecCCCeEEEEEEEee-CCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEE
Q psy7036 7 FAPSFTQKPQLRQEDEGNRLIFECQLLC-NPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYK 85 (254)
Q Consensus 7 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 85 (254)
..|.|.... ...+.+|+.+.|.|.+.+ .|.+.++|++||..+..+.++.+.... ......|.|.+++.+|+|.|+
T Consensus 2 ~~p~~~~~~-~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~~~~~~~~~---~~g~~~L~I~~v~~~D~G~Y~ 77 (207)
T 3rbs_A 2 IDPFTKSEL-AVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDR---NTGIIEMFMEKLQDEDEGTYT 77 (207)
T ss_dssp ----CCEEE-EEEECGGGCEEEEEECSCCCSCCEEEEEETTEEECSSSSCEEEECT---TTCEEEEEESCCCGGGCEEEE
T ss_pred CCCeeecCC-ceEEEeCCeEEEEEEEecCCCCCEEEEEECCEECccCCCEEEEEeC---CCCEEEEEECCCChhhCEEEE
Confidence 356666544 568899999999999964 799999999999999877776665422 224457999999999999999
Q ss_pred EEEEcCCCceEEEEEEEEecccc---------------CCCCCccccCCCeeeecCCCeEEEEEEEeeC-CCCeEEEEEC
Q psy7036 86 VKAKNKMGEVAASINLNFSREQI---------------DGLAPTFLKKPSIRQEDDGKRLLFECRIQAD-PAPTVIWSHS 149 (254)
Q Consensus 86 C~~~~~~~~~~~~~~l~v~~~~~---------------~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~~~~W~~~ 149 (254)
|.+.| |.......+.+..... ...+|.+.... ...+.+|+.+.|.|.+.+. |.|.+.|+|+
T Consensus 78 C~a~N--g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~-~~~v~~g~~v~l~C~v~g~~P~p~i~W~k~ 154 (207)
T 3rbs_A 78 FQLQD--GKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYL-SWEVTGECNVLLKCKVANIKKETHIVWYKD 154 (207)
T ss_dssp EEEEE--TTEEEEEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEE-EEEEETTTEEEEEEEEESCCTTCEEEEEET
T ss_pred EEEEC--CCeEEEEEEEEEccchhhhcccccccccccccCCCCceEecC-CcEEcCCCcEEEEEEEeCCCCCCEEEEEEC
Confidence 99998 4444444433211000 00134443322 3567889999999999998 8999999999
Q ss_pred CEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEE
Q psy7036 150 GVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNF 206 (254)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v 206 (254)
+..+...... .. .+ ....|.|.+++.+|+|.|+|.|.|..|....+..|..
T Consensus 155 g~~l~~~~~~--~~-~~---~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~~ 205 (207)
T 3rbs_A 155 EREISVDEKH--DF-KD---GICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVD 205 (207)
T ss_dssp TEEECCCCCC--CC-SS---EEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEECC
T ss_pred CEECCCCCce--Ec-CC---CEEEEEECCCCcccCEEEEEEEEcCCCEEEEEEEEec
Confidence 9998654321 11 11 1237999999999999999999999999888877754
No 31
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.97 E-value=8e-29 Score=173.19 Aligned_cols=182 Identities=16% Similarity=0.367 Sum_probs=136.8
Q ss_pred CCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEEE
Q psy7036 8 APSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKVK 87 (254)
Q Consensus 8 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 87 (254)
+|.|...+....+.+|++++|.|.+.+.|.+.+.|++++..+......++.....+ .|.|.+++..|+|.|+|.
T Consensus 2 ~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~------~L~i~~~~~~d~G~Y~C~ 75 (189)
T 2v5t_A 2 MLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANN------NLQILNINKSDEGIYRCE 75 (189)
T ss_dssp CCEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEC-----CBCCCTTEEECTTS------CEEETTCCGGGCEEEEEE
T ss_pred CceeeccCCCEEEeCCCcEEEEEEEcCCCCCEEEEEECCccceeccCCeEEEecCC------CEEEeeCCHhHCcEEEEE
Confidence 68899999999999999999999999889999999999988765433333333222 699999999999999999
Q ss_pred EEcCCCceE--EEEEEEEeccccCCCCCccccCCC--eeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEE
Q psy7036 88 AKNKMGEVA--ASINLNFSREQIDGLAPTFLKKPS--IRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSI 163 (254)
Q Consensus 88 ~~~~~~~~~--~~~~l~v~~~~~~~~~~~~~~~~~--~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~ 163 (254)
+.+..+... ....+.|.. +|.+..... ...+..|+.+.|.|.+.+.|.+.+.|++++..+........
T Consensus 76 ~~~~~~~~~~~~~~~l~v~~------~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~-- 147 (189)
T 2v5t_A 76 GRVEARGEIDFRDIIVIVNV------PPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYIL-- 147 (189)
T ss_dssp EEETTTTEEEEEEEEEEEEE------EEEEECSCCEEEEETTSCCCEEEECEEEEESCCEEEEEETTEECCCSSSEEE--
T ss_pred EEEcCCCceEEEEEEEEecC------CCCcccccccccccccCCCcEEEEEEEccCCCCeEEEEECCEECcCCCcEEE--
Confidence 998775433 344555542 233322222 34677899999999999999999999999998876554333
Q ss_pred cCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEe
Q psy7036 164 DKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFD 207 (254)
Q Consensus 164 ~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~ 207 (254)
..++ ..|.|.++..+|.|.|+|.|.|..|....++.|.|.
T Consensus 148 ~~~~----~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 187 (189)
T 2v5t_A 148 KGSN----TELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVF 187 (189)
T ss_dssp ETTT----TEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred ecCC----CEEEEcCCChhhCeeEEEEEEeCCCceeEEEEEEEE
Confidence 2222 279999999999999999999999988888877765
No 32
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.97 E-value=1.7e-29 Score=203.08 Aligned_cols=229 Identities=16% Similarity=0.191 Sum_probs=168.3
Q ss_pred CCCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEe-CCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCe-
Q psy7036 5 EDFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFR-GETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAG- 82 (254)
Q Consensus 5 ~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G- 82 (254)
+..+|.+...+....+.+|+.++|.|.+.+.+.+.++||+ +|..+....++.. ...+ .|.|.+++..|+|
T Consensus 111 V~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~v~W~~~~g~~l~~~~~~~~--~~~~------~L~i~~~~~~d~G~ 182 (524)
T 2ec8_A 111 VRDPAKLFLVDRSLYGKEDNDTLVRCPLTDPEVTNYSLKGCQGKPLPKDLRFIP--DPKA------GIMIKSVKRAYHRL 182 (524)
T ss_dssp CCCSSCSBCCCCCCCEETTSCEEECCCBSCCCCSCEEEECSSSCCCCSSCEEEE--ETTT------EEEEESCCGGGTTC
T ss_pred ECCCCcccccccceEEEcCCeEEEECcCCCCccceEEEEccCCcCcCCCCceeE--CCCc------cEEEeccchhhCCc
Confidence 3445555566777889999999999999876778999998 7777765443322 2222 6999999999999
Q ss_pred EEEEEEEcCCCceE-EEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCe-EEEEECCEecccCCcce
Q psy7036 83 LYKVKAKNKMGEVA-ASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPT-VIWSHSGVQVKEDKRHK 160 (254)
Q Consensus 83 ~Y~C~~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~-~~W~~~~~~~~~~~~~~ 160 (254)
.|+|.+.|..+... ..+.|.|... ...+|.+...+....+.+|+.+.|.|.+.+.|.+. +.|++++..+.......
T Consensus 183 ~Y~C~a~n~~~~~~s~~~~l~V~~~--~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~~i~W~~~~~~~~~~~~~~ 260 (524)
T 2ec8_A 183 CLHCSVDQEGKSVLSEKFILKVRPA--FKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYN 260 (524)
T ss_dssp EEEEEEC----CCCCCCEECCEECC--CCSCCEEECSCSEEEEETTSCEEEEEEEEESSTTCEEEEEETTCSCCCCEEEE
T ss_pred eEEEEEEECCceEEEEEEEEEEEeC--CCCCCcEEecCCcceEEcCCcEEEEEEEecCCCcEEEEEEeCCCCCccccccc
Confidence 99999998766543 3666666421 12566666666777888999999999999998886 99999988742111111
Q ss_pred EEEcCC-CCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEecCCCCCCCCCCCCeeecCC---ccccccCCCC
Q psy7036 161 FSIDKD-GHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDSDDAPVPGEGTKPVFTERP---VTKQSDDDLN 236 (254)
Q Consensus 161 ~~~~~~-~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~---~~~~~~~g~~ 236 (254)
.....+ .......|.|.++..+|+|.|+|.|.|..|.....+.|.|.. +|.+...+ ....+.+|+
T Consensus 261 ~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~----------~p~~~~~~~~~~~~~v~~G~- 329 (524)
T 2ec8_A 261 SWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVD----------KGFINIFPMINTTVFVNDGE- 329 (524)
T ss_dssp EEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCEEEEEEEEEEES----------SCEEEEEESSCSEEEECTTC-
T ss_pred cccccCCccceEEEEEECCCCHHHCEEEEEEEEecCCceEEEEEEEEec----------cCceEeecCCCceEEEcCCC-
Confidence 112111 122335899999999999999999999999888888888874 45554433 356788999
Q ss_pred cEEEEEEEeccCCCc-eeC
Q psy7036 237 DIVIECRLVGEPEPT-ISW 254 (254)
Q Consensus 237 ~~~l~C~~~~~p~p~-~~W 254 (254)
.+.|.|.+.|+|.|. ++|
T Consensus 330 ~v~l~C~~~g~P~p~~v~W 348 (524)
T 2ec8_A 330 NVDLIVEYEAFPKPEHQQW 348 (524)
T ss_dssp CEEEEEEEEEESCCCEEEE
T ss_pred cEEEEEEEeecCCCcEEEE
Confidence 999999999999999 998
No 33
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.97 E-value=5.4e-29 Score=200.10 Aligned_cols=235 Identities=13% Similarity=0.160 Sum_probs=159.0
Q ss_pred CCCCeeEeCCCceeecCCCeEEEEEEEeeCCCC--ceEEEeCCEEeeeCCcceE-EEeecCCcceEEEEEEeccCCCCCe
Q psy7036 6 DFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKP--DIVWFRGETQLSEDTRTVM-KTTPIGTNKYLVALELDDVIETDAG 82 (254)
Q Consensus 6 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~--~v~W~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~G 82 (254)
..+|.+...+....+.+|+.++|.|.+.|.+.+ .++|+|+|..+........ ....++.....+.|.|.+++.+|+|
T Consensus 112 ~~~P~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G 191 (523)
T 2rcj_C 112 KANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHR 191 (523)
T ss_pred CcCCeEEecCCcccccCCCceEEEEEeccccCCceEEEEecCCCCCCCceEeccccccCCCCEEEEEEEEEechhcCCCc
Confidence 356777777777677889999999999887653 8999999988754322111 1111222223357999999999999
Q ss_pred EEEEEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeC-CCC-eEEEEECCEecccCCcce
Q psy7036 83 LYKVKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQAD-PAP-TVIWSHSGVQVKEDKRHK 160 (254)
Q Consensus 83 ~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~-~~~W~~~~~~~~~~~~~~ 160 (254)
.|+|.+.|..+.......+.+.. ....+|.+........+.+|+.+.|.|.+.+. |.+ .+.|++++..+.......
T Consensus 192 ~Y~C~a~n~~~~~~~~~~~~~~~--~~~~~P~v~~~~~~~~~~~G~~~~l~C~~~g~~P~p~~v~W~k~g~~~~~~~~~~ 269 (523)
T 2rcj_C 192 SYSCQVTHEGSTVEKTVAPTECS--ASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPQPVTVSWNSGALTSGVHTFPA 269 (523)
T ss_pred eEEEEEEecCcccccceeeeecC--CCCcCCEEEecCCCcccccCCceEEEEEEeceeCCCeEEEEecCCcccceEeCCc
Confidence 99999999887655544433211 11133443322223345689999999999886 777 899999997754322111
Q ss_pred EEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEecCCCCCCCCCCCCe-eecCCcccc-ccCCCCcE
Q psy7036 161 FSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDSDDAPVPGEGTKPV-FTERPVTKQ-SDDDLNDI 238 (254)
Q Consensus 161 ~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~-~~~~~~~~~-~~~g~~~~ 238 (254)
.....+.+...+.|.|.++..+| |.|+|.|.|..|.......+.+.. .|. +...|.... +.+|+ .+
T Consensus 270 ~~~~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~g~~~~~~~l~v~~----------~P~~~~~~p~~~~~v~~g~-~~ 337 (523)
T 2rcj_C 270 VLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPLS----------LPSVFLFPPKPKDTLMISR-TP 337 (523)
T ss_pred EecCCCcEEEEEEEEechhhcCC-ceEEEEEEeCCCCcceEEecCCCc----------CceEEecCCCchhhcccCC-ce
Confidence 21111222334689999999999 999999999999876666665542 233 333444333 67888 99
Q ss_pred EEEEEEeccCC----CceeC
Q psy7036 239 VIECRLVGEPE----PTISW 254 (254)
Q Consensus 239 ~l~C~~~~~p~----p~~~W 254 (254)
.|.|.+.|.|+ +.++|
T Consensus 338 ~l~C~~~g~~p~~~~~~v~W 357 (523)
T 2rcj_C 338 EVTCVVVDVSHEDPQVKFNW 357 (523)
T ss_pred EEEEEEecccCCCCceEEEE
Confidence 99999999754 47888
No 34
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.97 E-value=3.9e-29 Score=186.39 Aligned_cols=209 Identities=13% Similarity=0.138 Sum_probs=157.7
Q ss_pred CCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEE
Q psy7036 6 DFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYK 85 (254)
Q Consensus 6 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 85 (254)
..+|.|...+....+.+|++++|.|.+.+ .++|++++..+. .. ...+ ..|.|.+++..|+|.|+
T Consensus 10 ~~~P~i~~~~~~~~v~~G~~v~l~C~~~~----~i~W~~~~~~~~------~~-~~~~-----~~L~i~~~~~~d~G~Y~ 73 (290)
T 2o26_X 10 PSPPSIHPAQSELIVEAGDTLSLTCIDPD----FVRWTFKTYFNE------MV-ENKK-----NEWIQEKAEATRTGTYT 73 (290)
T ss_dssp --CCEESSCSSEEEEETTSCEEEEEECTT----EEEEEEECSSSC------EE-EECS-----SEEEETTCCGGGCEEEE
T ss_pred CCCCEEeCCCCeEEEcCCCcEEEEECCCC----cEEEecCCccee------ee-cCCC-----ceEEEeccCHHhCeEEE
Confidence 46788888888889999999999999976 899999987651 11 1111 27999999999999999
Q ss_pred EEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCC-CeEEEE-ECCEecccCCcceEEE
Q psy7036 86 VKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPA-PTVIWS-HSGVQVKEDKRHKFSI 163 (254)
Q Consensus 86 C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~-~~~~W~-~~~~~~~~~~~~~~~~ 163 (254)
|.+.| |. ...+.|.|.. +|..........+.+|+.+.|.|.+.+ |. +.+.|+ +++..+.... ++..
T Consensus 74 C~~~n--g~-~~~~~l~V~~------~~~~~~~~~~~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~~~~--~~~~ 141 (290)
T 2o26_X 74 CSNSN--GL-TSSIYVFVRD------PAKLFLVGLPLFGKEDSDALVRCPLTD-PQVSQYSLIECDGKSLPTDL--TFVP 141 (290)
T ss_dssp EEESS--SC-EEEEEEEEEC------SSCCBCCCCCEEEETTSCEEECCCBSC-CSCEEEEEEETTSCCCCTTC--EEEE
T ss_pred EEeeC--Cc-cEEEEEEEeC------CCcccccccceEEecCCeEEEeCcCCC-CCCceEEEEeCCCcCCCCCC--ceee
Confidence 99998 43 6667777763 233234445567779999999999985 77 889995 6777665432 3333
Q ss_pred cCCCCceeeEEEEccCCCCCce-eEEEEEEcCCCcc-eEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEE
Q psy7036 164 DKDGHSYFASLEIIDVTIEDAG-KYKVTAKNELGES-NATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIE 241 (254)
Q Consensus 164 ~~~~~~~~~~l~i~~~~~~d~G-~y~C~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~ 241 (254)
..++ .|.|.+++.+|.| .|+|.|.|..+.. ...+.+.|... ...+|.+...+....+.+|+ .+.|.
T Consensus 142 ~~~~-----~L~i~~v~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~------~~~~P~i~~~~~~~~v~~G~-~v~l~ 209 (290)
T 2o26_X 142 NPKA-----GITIKNVKRAYHRLCVRCAAQRDGTWLHSDKFTLKVREA------IKAIPVVSVPETSHLLKKGD-TFTVV 209 (290)
T ss_dssp ETTT-----EEEEESCCGGGTTCEEEEEEEETTEEEECCCEEEEEECC------CCSCCEEECSCSBCCCCTTC-CEEEE
T ss_pred CCCC-----CEEEecccHHHCCCEEEEEEEECCceEEeEEEEEEEEeC------CCCCCccccCCCcceEecCC-cEEEE
Confidence 3333 7999999999999 9999999985543 33466666531 12367787777777888999 99999
Q ss_pred EEEeccCCCc-eeC
Q psy7036 242 CRLVGEPEPT-ISW 254 (254)
Q Consensus 242 C~~~~~p~p~-~~W 254 (254)
|.+.|.|.|. ++|
T Consensus 210 C~~~g~p~p~~i~W 223 (290)
T 2o26_X 210 CTIKDVSTSVNSMW 223 (290)
T ss_dssp EEEEESSTTCEEEE
T ss_pred EEEecCCcceeEEE
Confidence 9999999997 998
No 35
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.97 E-value=4.4e-29 Score=189.31 Aligned_cols=209 Identities=15% Similarity=0.198 Sum_probs=150.2
Q ss_pred CceeecCCCeEEEEEEEeeC---------CCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCe-EEE
Q psy7036 16 QLRQEDEGNRLIFECQLLCN---------PKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAG-LYK 85 (254)
Q Consensus 16 ~~~~v~~g~~v~l~C~~~~~---------~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G-~Y~ 85 (254)
..+.+.+|+++.|.|.+.+. |.+.++|+|++..+....+. . ..+ .|.|.+++.+|+| .|+
T Consensus 37 ~~v~v~eG~~v~L~C~~~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~-~---~~~------~L~i~~v~~~D~Gs~Y~ 106 (329)
T 3oq3_B 37 MNDMAALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRPLNRR-V---KNG------DLWIANYTSNDSHRRYL 106 (329)
T ss_dssp EEEEECTTSCEEECCHHHHCTTTGGGSCCTTCEEEEEECSSSCEECSTT-E---ETT------EEEESSCCGGGGGCCEE
T ss_pred ceEEEECCCeEEEEccCCCCccccccccCCCCeeEEEECCCCccccCce-e---ecc------eEEEcCCChHhCCCcEE
Confidence 55678999999999999774 55789999999876553332 1 111 7999999999999 999
Q ss_pred EEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCC-CCeEEEEECCEecccCCcceEEEc
Q psy7036 86 VKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADP-APTVIWSHSGVQVKEDKRHKFSID 164 (254)
Q Consensus 86 C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~-~~~~~W~~~~~~~~~~~~~~~~~~ 164 (254)
|.+.|..|.......+.+.. .+|.+........+.+|+.+.|.|.+.+.| .+.+.|+|++..+..... ++...
T Consensus 107 C~a~n~~g~~~~~~~~~v~~-----~~p~~~~~~~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~~~-~~~~~ 180 (329)
T 3oq3_B 107 CTVTTKNGDCVQGIVRSHIR-----KPPSCIPETYELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIIDGT-KYSQS 180 (329)
T ss_dssp EEEECTTSCEEEEEEEEEEC-----CCCSCEEEEEETTSSTTTCEEEECCCCSCCCCCEEEEEETTEECCCSSS-SEEEE
T ss_pred EEEEeCCCceeeEEEEEEEc-----CCCcEeccccceEEeCCCcEEEEeccCCCCCCceEEEEECCccCCCCCc-eEecC
Confidence 99999887644433334432 233333222233456799999999999999 899999999998853332 23222
Q ss_pred CCCCceeeEEEEccCCCCCceeEEEEEEcC--CCcceEE----EEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcE
Q psy7036 165 KDGHSYFASLEIIDVTIEDAGKYKVTAKNE--LGESNAT----ISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDI 238 (254)
Q Consensus 165 ~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~--~~~~~~~----~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~ 238 (254)
++ .|.|.+++.+|+|.|+|.|.|. .|..... +.|.|...+.. ..|.+ .+....+.+|+ .+
T Consensus 181 -~~-----~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~-----~~~~~--~~~~~~v~~G~-~~ 246 (329)
T 3oq3_B 181 -GQ-----NLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDH-----RFKLI--LDPKINVTIGE-PA 246 (329)
T ss_dssp -TT-----EEEECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCCC-----CEEEE--CCSEEEECTTS-CE
T ss_pred -CC-----EEEEeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECCCCC-----CCcee--cCCeeEEecCC-CE
Confidence 22 7999999999999999999987 6544333 55666542111 11333 45556788899 99
Q ss_pred EEEEEEeccC---CC-ceeC
Q psy7036 239 VIECRLVGEP---EP-TISW 254 (254)
Q Consensus 239 ~l~C~~~~~p---~p-~~~W 254 (254)
.|.|.+.|.| .| .++|
T Consensus 247 ~l~C~~~g~p~~~~~i~v~W 266 (329)
T 3oq3_B 247 NITCTAVSTSLLVDDVLIDW 266 (329)
T ss_dssp EEEEEEEETTCCTTCCEEEE
T ss_pred EEEEEEEECCCCCCCcEEEE
Confidence 9999999998 67 7788
No 36
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.97 E-value=1.2e-28 Score=207.64 Aligned_cols=219 Identities=21% Similarity=0.398 Sum_probs=172.7
Q ss_pred CCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEE
Q psy7036 6 DFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYK 85 (254)
Q Consensus 6 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 85 (254)
..+|.+...+....+.+|++++|.|.+.+.|.+.++|+++|..+..... .|.|.+++..|+|.|+
T Consensus 341 ~~~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~~~~~~~---------------~L~i~~v~~~d~G~Y~ 405 (816)
T 3dmk_A 341 TAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHSES---------------VLRIESVKKEDKGMYQ 405 (816)
T ss_dssp CEEEEEEEESSEEECCTTSCEEEEEEEEEECCCEEEEEETTEECSCCSS---------------EEEESSCCGGGCEEEE
T ss_pred cCCCceeeCCCceEecCCCCEEEEEEEeccCCCEEEEEECCEECCCCCC---------------EEEEcCCCHHHCEEEE
Confidence 3456666777788899999999999999999999999999998754321 6999999999999999
Q ss_pred EEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEc-
Q psy7036 86 VKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSID- 164 (254)
Q Consensus 86 C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~- 164 (254)
|.+.|..+.......+.|... ..+|.+........+..|+.+.|.|.+.+.|.+.+.|++++..+...........
T Consensus 406 C~a~n~~g~~~~~~~l~v~~~---~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~ 482 (816)
T 3dmk_A 406 CFVRNDRESAEASAELKLGGR---FDPPVIRQAFQEETMEPGPSVFLKCVAGGNPTPEISWELDGKKIANNDRYQVGQYV 482 (816)
T ss_dssp EEEECSSCEEEECCEEECCCS---SCCCEEEEECCCEEECSSSCEEEEEEEECSSCCEEEEEETTEECCSCTTEEEEEEE
T ss_pred EEEECCCCcEEEEEEEEEccc---cCCCceEecCcceEEcCCCCEEEEEEEecCCCCEEEEEECCEECCCCCCcccccEE
Confidence 999999887777777776421 1455555555556788999999999999999999999999998865544332211
Q ss_pred CCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEE
Q psy7036 165 KDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRL 244 (254)
Q Consensus 165 ~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~ 244 (254)
.......+.|.|.++..+|.|.|+|.|.|..|....+..+.|.. +|.+. .+....+.+|+ .+.|.|.+
T Consensus 483 ~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~----------~p~~~-~~~~~~v~~G~-~v~l~C~~ 550 (816)
T 3dmk_A 483 TVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNVYG----------LPYIR-QMEKKAIVAGE-TLIVTCPV 550 (816)
T ss_dssp CTTSCEEEEEEESSCCTTTCEEEEEEEEETTEEEEEEEEEEECS----------SCEEC-CCCCEEEETTC-CEEEECCE
T ss_pred ecCCCcEEEEEEeeccccCCEEEEEEEEECCCeEEEEEEEEEec----------CCeeE-ccCCeEEecCC-eEEEEEEe
Confidence 11112234799999999999999999999999888888888874 34443 33345677888 99999999
Q ss_pred eccCCCceeC
Q psy7036 245 VGEPEPTISW 254 (254)
Q Consensus 245 ~~~p~p~~~W 254 (254)
.+.|.+.+.|
T Consensus 551 ~g~p~~~i~W 560 (816)
T 3dmk_A 551 AGYPIDSIVW 560 (816)
T ss_dssp ECSSEEEEEE
T ss_pred cCCCCCEEEE
Confidence 9999989988
No 37
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.97 E-value=3.7e-29 Score=188.49 Aligned_cols=227 Identities=15% Similarity=0.180 Sum_probs=151.1
Q ss_pred eEeCCCceeecCCCeEEEEEEEeeCCCC-----ceEEEeCCEEe-------------eeCCcceEEEeecCCcceEEEEE
Q psy7036 11 FTQKPQLRQEDEGNRLIFECQLLCNPKP-----DIVWFRGETQL-------------SEDTRTVMKTTPIGTNKYLVALE 72 (254)
Q Consensus 11 ~~~~~~~~~v~~g~~v~l~C~~~~~~~~-----~v~W~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~l~ 72 (254)
++..|..+.+..|++++|.|.+.+.+.+ .++|+|++... ....+..+...........++|.
T Consensus 3 vv~~P~~v~~~~G~~v~L~C~v~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~ 82 (313)
T 4fqp_A 3 VVQAPTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLR 82 (313)
T ss_dssp EEECCSEECCBTTSCEEECCEEECCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEE
T ss_pred EEcCCCEEEEecCCCEEEEEEEECCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEE
Confidence 4567888889999999999999875543 48999987521 11112211111111122234799
Q ss_pred EeccCCCCCeEEEEEEEc-CCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEe-eCCCCeEEEEECC
Q psy7036 73 LDDVIETDAGLYKVKAKN-KMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQ-ADPAPTVIWSHSG 150 (254)
Q Consensus 73 i~~~~~~d~G~Y~C~~~~-~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~~~~~~~~W~~~~ 150 (254)
|.+++.+|+|.|+|.+.+ ..+.....+.|.+. .+|..........+..+..+.+.|.+. +.|.+.+.|++++
T Consensus 83 I~~v~~~D~G~Y~C~v~~~~~~~~~~~~~l~v~------~~P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~ 156 (313)
T 4fqp_A 83 MFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVL------AKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDL 156 (313)
T ss_dssp ECSCCGGGCEEEEEEEECSSSCEEEEEEEECCB------BCCEEEEEECCBCCCSSCEEEEEEEEEEEBSCCEEEEEETT
T ss_pred ECcCChhhCEEEEEEEeeccCcceeeeeeeeec------cCCcceecccceEeecCceEEEEEEccCccCCcEEEeecCC
Confidence 999999999999998864 44555566666654 334433333344556788888999865 7889999999998
Q ss_pred EecccCCcceEEEcCCCC-ceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEecCCCCCCCCCCCCeeecCC-cc
Q psy7036 151 VQVKEDKRHKFSIDKDGH-SYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDSDDAPVPGEGTKPVFTERP-VT 228 (254)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~-~~ 228 (254)
..+.... ......++. ...+.|.|.....+|.|.|+|.|.|..+.......+.+... .+|.+...+ ..
T Consensus 157 ~~~~~~~--~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~--------~~P~v~~~~~~~ 226 (313)
T 4fqp_A 157 GGMPNTS--QVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVY--------YPPEVSISGYDN 226 (313)
T ss_dssp CCEEEEE--EEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBC--------EEEEEEEECCCS
T ss_pred ccccccc--eeeeecccccccceeeeecccccccCeeEEEEEEccCcCccceeeeecccc--------cCCccccccccc
Confidence 7764322 122222222 23457999999999999999999998876654444443321 255554433 33
Q ss_pred ccccCCCCcEEEEEEEeccCCC-ceeC
Q psy7036 229 KQSDDDLNDIVIECRLVGEPEP-TISW 254 (254)
Q Consensus 229 ~~~~~g~~~~~l~C~~~~~p~p-~~~W 254 (254)
..+.+|+ .+.|.|.+.|+|.| .++|
T Consensus 227 ~~~~~g~-~v~l~C~~~g~P~p~~v~W 252 (313)
T 4fqp_A 227 NWYLGQN-EATLTCDARSNPEPTGYNW 252 (313)
T ss_dssp CEETTCC-CEEEEEEEEEESCCCEEEE
T ss_pred eeecCCC-eEEEEEEecCCCCCcEEEE
Confidence 3445566 99999999999999 5888
No 38
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.97 E-value=9.2e-29 Score=173.35 Aligned_cols=184 Identities=26% Similarity=0.439 Sum_probs=143.9
Q ss_pred CCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEE
Q psy7036 6 DFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYK 85 (254)
Q Consensus 6 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 85 (254)
..+|.|...+....+.+|++++|.|.+.+.|.+.+.|++++..+..... ++.....+. .|.|.+++..|+|.|+
T Consensus 5 ~~~P~i~~~~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~~~~-~~~~~~~~~-----~L~i~~~~~~d~G~Y~ 78 (192)
T 2iep_A 5 PKAPVITTPLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDT-RYSIRENGQ-----LLTILSVEDSDDGIYC 78 (192)
T ss_dssp CEEEEESSCCCEEEEETTSCEEEECCEEEESCCEEEEEETTEECCTTCT-TEEEEGGGT-----EEEESSCCGGGCEEEE
T ss_pred CCCceeecCccceeeeCCCcEEEEeeCCCCCCCeEEEEECCEEccccCc-cEEEcCCcc-----EEEEcCCCcccCeEEE
Confidence 3468888888888999999999999999888899999999998764322 222222222 6999999999999999
Q ss_pred EEEEcCCCc-eEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEc
Q psy7036 86 VKAKNKMGE-VAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSID 164 (254)
Q Consensus 86 C~~~~~~~~-~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~ 164 (254)
|.+.+..+. ......|.|.. +|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+..... ....
T Consensus 79 C~~~~~~~~~~~~~~~l~v~~------~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~--~~~~ 150 (192)
T 2iep_A 79 CTANNGVGGAVESCGALQVKM------KPKITRPPINVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALRENSR--IAVL 150 (192)
T ss_dssp EEEECSSSCCEEEEEEEEEEE------EEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCCSS--EEEC
T ss_pred EEEEcCCCceeEeEEEEEEEe------CCccccCCcceEEeCCCcEEEEEEEeccCCceEEEEeCCEEccCCCc--EEEe
Confidence 999998876 45556676652 34444445566788999999999999999999999999998865543 2233
Q ss_pred CCCCceeeEEEEccCCCCCceeEEEEEEcCCCcc-eEEEEEEEec
Q psy7036 165 KDGHSYFASLEIIDVTIEDAGKYKVTAKNELGES-NATISLNFDS 208 (254)
Q Consensus 165 ~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~-~~~~~~~v~~ 208 (254)
.++ .|.|.+++.+|.|.|+|.|.|..|.. ...+.|.|..
T Consensus 151 ~~~-----~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~ 190 (192)
T 2iep_A 151 ESG-----SLRIHNVQKEDAGQYRCVAKNSLGTAYSKLVKLEVEV 190 (192)
T ss_dssp TTS-----CEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred cCC-----cEEEecCChhhCEEEEEEEEcCCCcEEEEEEEEEEEe
Confidence 333 69999999999999999999999876 4567777763
No 39
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.97 E-value=7.6e-29 Score=187.87 Aligned_cols=231 Identities=13% Similarity=0.208 Sum_probs=152.0
Q ss_pred CeeEeCCCceeecCCCeEEEEEEEeeC-CCCceEEEeCCEE----eeeCC---cceEEEeecC--CcceEEEEEEeccCC
Q psy7036 9 PSFTQKPQLRQEDEGNRLIFECQLLCN-PKPDIVWFRGETQ----LSEDT---RTVMKTTPIG--TNKYLVALELDDVIE 78 (254)
Q Consensus 9 p~~~~~~~~~~v~~g~~v~l~C~~~~~-~~~~v~W~~~~~~----~~~~~---~~~~~~~~~~--~~~~~~~l~i~~~~~ 78 (254)
..|+..|....+.+|++++|.|.+.+. |.+.++|+|++.. +.... ..++...... .......|.|.+++.
T Consensus 4 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~ 83 (327)
T 2wng_A 4 LQVIQPDKSVSVAAGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITP 83 (327)
T ss_dssp CCEECCCSEEEEETTSCEEECCEESCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCCG
T ss_pred eEEEcCCCceEEecCCcEEEEEEccCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCcc
Confidence 457778889999999999999999886 8889999998743 11110 0112111110 012233799999999
Q ss_pred CCCeEEEEEEEcCCCce-----EEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCC--eEEEEECCE
Q psy7036 79 TDAGLYKVKAKNKMGEV-----AASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAP--TVIWSHSGV 151 (254)
Q Consensus 79 ~d~G~Y~C~~~~~~~~~-----~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~--~~~W~~~~~ 151 (254)
+|+|.|+|.+.|..+.. .....|.|...+ .+|.+. .+ ...+..|+.+.|.|.+.+.|++ .+.|++++.
T Consensus 84 ~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p---~~p~i~-~~-~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~ 158 (327)
T 2wng_A 84 ADAGTYYCVKFRKGSPDTEFKSGAGTELSVRAKP---SAPVVS-GP-AARATPQHTVSFTCESHGFSPRDITLKWFKNGN 158 (327)
T ss_dssp GGCEEEEEEEEESSTTCEEEEECCCEEEEEEBCC---CCCEEE-CC-SSCBCTTCEEEEEEEEEEEBSSCCEEEEEETTE
T ss_pred ccCeEEEEEeecCCCcceeEeecCcEEEEEEecC---CCceee-cc-ccccCCCCEEEEEEEEeCccCCCcEEEEEECCE
Confidence 99999999999876541 124566665321 222222 22 2456789999999999988765 899999998
Q ss_pred ecccCCcceEEEcCC-C-CceeeEEEEccCCCCCceeEEEEEEcCCCcc-eEEEEEEEecCCCCCCCCCCCCeeecCCcc
Q psy7036 152 QVKEDKRHKFSIDKD-G-HSYFASLEIIDVTIEDAGKYKVTAKNELGES-NATISLNFDSDDAPVPGEGTKPVFTERPVT 228 (254)
Q Consensus 152 ~~~~~~~~~~~~~~~-~-~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~ 228 (254)
.+..... ....... + ....+.|.|.....+|.|.|+|.|.|..+.. .......+... ...+|.+...+..
T Consensus 159 ~l~~~~~-~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~------v~~~P~i~~~~~~ 231 (327)
T 2wng_A 159 ELSDFQT-NVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSET------IRVPPTLEVTQQP 231 (327)
T ss_dssp ECCCEEE-EEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEEGGGT------BCBCCEEEEEEEC
T ss_pred Ecccccc-ccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccCCCcccceEEeccc------cCCCCEEEEecCC
Confidence 8764432 1112212 1 2234568888777778899999999988763 22222222211 1125666655444
Q ss_pred ccccCCCCcEEEEEEEeccCC-C-ceeC
Q psy7036 229 KQSDDDLNDIVIECRLVGEPE-P-TISW 254 (254)
Q Consensus 229 ~~~~~g~~~~~l~C~~~~~p~-p-~~~W 254 (254)
+.+|+ .+.|.|.+.|.|+ + .+.|
T Consensus 232 --~~~G~-~v~l~C~~~g~~p~~~~v~W 256 (327)
T 2wng_A 232 --VRAEN-QVNVTCQVRKFYPQRLQLTW 256 (327)
T ss_dssp --CSSTT-CCEEEEEEEEEBSSCEEEEE
T ss_pred --cCCCC-cEEEEEEEccccCCCcEEEE
Confidence 67888 9999999999644 4 6888
No 40
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.97 E-value=3e-28 Score=169.35 Aligned_cols=177 Identities=16% Similarity=0.317 Sum_probs=137.0
Q ss_pred CCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEEE
Q psy7036 8 APSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKVK 87 (254)
Q Consensus 8 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 87 (254)
.|.|...|....+.+|++++|.|.+.+.|.+.+.|++++..+....+....... ......|.|.+++..|+|.|+|.
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~---~~~~~~L~i~~~~~~d~G~Y~C~ 78 (182)
T 1rhf_A 2 GLKLMGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSE---QHWIGFLSLKSVERSDAGRYWCQ 78 (182)
T ss_dssp -----CCCEEEEEETTCCEEEEEEEESCSSCCEEEEETTEECCSSEEEEEEEET---TEEEEEEEESSCCGGGCEEEEEE
T ss_pred CCEEEeCCcceEEeCCCcEEEEEEEeCCCCCeEEEEECCeecCCCCceEEEecC---CCceEEEEEeecCcccCeEEEEE
Confidence 477888899999999999999999998889999999999988766444333221 22345899999999999999999
Q ss_pred EEcCCCc-eEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCC-eEEEEECCEecccCCcceEEEcC
Q psy7036 88 AKNKMGE-VAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAP-TVIWSHSGVQVKEDKRHKFSIDK 165 (254)
Q Consensus 88 ~~~~~~~-~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~-~~~W~~~~~~~~~~~~~~~~~~~ 165 (254)
+.+..+. ....+.|.|. .+|.+...+....+..|+.+.|.|.+.+.|.+ .+.|++++..+..... .
T Consensus 79 ~~~~~~~~~~~~~~l~V~------~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~------~ 146 (182)
T 1rhf_A 79 VEDGGETEISQPVWLTVE------GVPFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPAP------S 146 (182)
T ss_dssp ESSCTTCEECCCEEEEEE------CSCEEEECCCCEEECTTCCEEEEEEEECSSSCCEEEEEETTEECSCSEE------S
T ss_pred EEcCCCcEEEEEEEEEEe------cCCeEEecCcceEecCCCEEEEEeEecCCCCCCEEEEEcCCeECCCCCC------C
Confidence 9988664 3456777776 45666666666788899999999999999999 9999999988754321 1
Q ss_pred CCCceeeEEEEccCCCCCceeEEEEEEcCCCcce-EEEEEEE
Q psy7036 166 DGHSYFASLEIIDVTIEDAGKYKVTAKNELGESN-ATISLNF 206 (254)
Q Consensus 166 ~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~-~~~~~~v 206 (254)
. ..|.|.++ +|+|.|+|.|.|..|... .++.|.|
T Consensus 147 ~-----~~L~i~~~--~d~G~Y~C~a~N~~g~~~s~~~~l~V 181 (182)
T 1rhf_A 147 P-----SVLNVTGV--TQSTMFSCEAHNLKGLASSRTATVHL 181 (182)
T ss_dssp S-----EEEEECCC--SSCEEEEEEEEETTEEEECCCEEEEE
T ss_pred c-----eEEEEecc--ccCeEEEEEEECCCCCcccceEEEEe
Confidence 1 27889887 589999999999998774 4666665
No 41
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.97 E-value=2.2e-28 Score=196.51 Aligned_cols=235 Identities=14% Similarity=0.206 Sum_probs=157.3
Q ss_pred CCCCeeEeCCCceeecCCCeEEEEEEEeeC-CCC-ceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeE
Q psy7036 6 DFAPSFTQKPQLRQEDEGNRLIFECQLLCN-PKP-DIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGL 83 (254)
Q Consensus 6 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~-~~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 83 (254)
..+|.+...+....+.+|+.+.|.|.+.|. |.+ .++|++++..+........ ....+.....+.|.|.+++..| |.
T Consensus 217 ~~~P~v~~~~~~~~~~~G~~~~l~C~~~g~~P~p~~v~W~k~g~~~~~~~~~~~-~~~~g~~~~~s~L~i~~~~~~d-G~ 294 (523)
T 2rcj_C 217 TKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPQPVTVSWNSGALTSGVHTFPAV-LQSSGLYSLSSVVTVPSSSLGT-QT 294 (523)
T ss_pred CcCCEEEecCCCcccccCCceEEEEEEeceeCCCeEEEEecCCcccceEeCCcE-ecCCCcEEEEEEEEechhhcCC-ce
Confidence 345666544444467899999999999885 767 8999999987533211111 1112222334589999999999 99
Q ss_pred EEEEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeee-ecCCCeEEEEEEEeeCCC----CeEEEEECCEecccCCc
Q psy7036 84 YKVKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQ-EDDGKRLLFECRIQADPA----PTVIWSHSGVQVKEDKR 158 (254)
Q Consensus 84 Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~-~~~g~~~~l~C~~~~~~~----~~~~W~~~~~~~~~~~~ 158 (254)
|+|.|.|..|.......|.|.. .|..+...+.... +.+|+.+.|.|.+.+.++ +.+.|+|++..+.....
T Consensus 295 Y~C~a~n~~g~~~~~~~l~v~~-----~P~~~~~~p~~~~~v~~g~~~~l~C~~~g~~p~~~~~~v~W~k~g~~l~~~~~ 369 (523)
T 2rcj_C 295 YICNVNHKPSNTKVDKRVEPLS-----LPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPQVKFNWYVDGVQVHNAKT 369 (523)
T ss_pred EEEEEEeCCCCcceEEecCCCc-----CceEEecCCCchhhcccCCceEEEEEEecccCCCCceEEEEEECCeEccCCcc
Confidence 9999999998866666665532 1222222222222 678999999999998653 48999999998865543
Q ss_pred ceEEEcCCCC-ceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCc
Q psy7036 159 HKFSIDKDGH-SYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLND 237 (254)
Q Consensus 159 ~~~~~~~~~~-~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~ 237 (254)
.......++. ...+.|.|.++..+|.|.|+|.|.|..+.......+.+... ...+|.+...+.......++ .
T Consensus 370 ~~~~~~~~g~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~------~~~~P~v~~~~~~~~~~~~~-~ 442 (523)
T 2rcj_C 370 KPREQQYNSTYRVVSVLTVLHQNWLDGKEYKCKVSNKALPAPIEKTISKAKG------QPREPQVYTLPPSREEMTKN-Q 442 (523)
T ss_pred CCceecCCCcEEEEEEEEECHHHhcCCCeEEEEEeCCCCCCceeEEEEcccC------CCCCCEEEEeCCChHHccCC-c
Confidence 2222223332 34467999999999999999999998777655544443110 11355555444333445677 7
Q ss_pred EEEEEEEeccCCC--ceeC
Q psy7036 238 IVIECRLVGEPEP--TISW 254 (254)
Q Consensus 238 ~~l~C~~~~~p~p--~~~W 254 (254)
+.|.|.+.|.|+| .++|
T Consensus 443 ~~l~C~~~g~~p~~~~v~W 461 (523)
T 2rcj_C 443 VSLTCLVKGFYPSDIAVEW 461 (523)
T ss_pred eEEEEEEEeeECCCCEEEE
Confidence 9999999998766 7888
No 42
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.97 E-value=6.7e-29 Score=176.72 Aligned_cols=192 Identities=24% Similarity=0.460 Sum_probs=142.7
Q ss_pred CCCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcc--eEEEeecCCcceEEEEEEeccCCCCCe
Q psy7036 5 EDFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRT--VMKTTPIGTNKYLVALELDDVIETDAG 82 (254)
Q Consensus 5 ~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~i~~~~~~d~G 82 (254)
...+|.|...|....+.+|++++|.|.+.+.|.+.+.|++++..+...... ........+......|.|.+++..|+|
T Consensus 6 ~~~pp~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G 85 (212)
T 2v9r_A 6 EDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEG 85 (212)
T ss_dssp CCEEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCE
T ss_pred ccCCcceecCCCceEEeCCCcEEEEEEcCCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCe
Confidence 345789999999999999999999999998899999999999987643211 011111122222224566778999999
Q ss_pred EEEEEEEcCCCce-EEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEE-eeCCCCeEEEEECCEecccCCcce
Q psy7036 83 LYKVKAKNKMGEV-AASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRI-QADPAPTVIWSHSGVQVKEDKRHK 160 (254)
Q Consensus 83 ~Y~C~~~~~~~~~-~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~-~~~~~~~~~W~~~~~~~~~~~~~~ 160 (254)
.|+|.+.|..+.. .....|.|.. .++.+...+....+..|+.+.|.|.+ .+.|.+.+.|++++..+......
T Consensus 86 ~Y~C~~~n~~g~~~~~~~~l~V~~-----~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~~~~- 159 (212)
T 2v9r_A 86 VYVCVARNYLGEAVSHDASLEVAI-----LRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDER- 159 (212)
T ss_dssp EEEEEEEETTEEEECCCEEEEECE-----ECSSCSBCCCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECTTSTT-
T ss_pred EEEEEEECCCCceeecceEEEEEe-----ccccceeCCCceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCCcce-
Confidence 9999999987754 3456666643 23334445556678899999999998 88999999999999988754432
Q ss_pred EEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceE-EEEEEEec
Q psy7036 161 FSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNA-TISLNFDS 208 (254)
Q Consensus 161 ~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~-~~~~~v~~ 208 (254)
+... ++ .|.|.++..+|.|.|+|.|.|..|.... .+.|.|..
T Consensus 160 ~~~~-~~-----~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~V~~ 202 (212)
T 2v9r_A 160 ITIR-GG-----KLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLE 202 (212)
T ss_dssp EEEE-TT-----EEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred EEcc-CC-----eEEEeeCCHhhCeeEEEEEecccCceecceEEEEEEe
Confidence 2222 22 7999999999999999999999987644 47777774
No 43
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.97 E-value=1.1e-29 Score=196.88 Aligned_cols=224 Identities=19% Similarity=0.260 Sum_probs=158.0
Q ss_pred CCCeeEeCCCceeecCCCeEEEEEEEeeCC---CCceEEEeCCEEeeeCC---cceEEEeecCCcceEEEEEEeccCCCC
Q psy7036 7 FAPSFTQKPQLRQEDEGNRLIFECQLLCNP---KPDIVWFRGETQLSEDT---RTVMKTTPIGTNKYLVALELDDVIETD 80 (254)
Q Consensus 7 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~---~~~v~W~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~i~~~~~~d 80 (254)
.+|.+...+....+.+|+.++|.|.+.+.+ .+.+.|++++..+.... ..+......+ .|.|.+++..|
T Consensus 102 ~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~------~L~i~~v~~~d 175 (388)
T 2v5m_A 102 VAQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAEYDGKYLVLPSG------ELHIREVGPED 175 (388)
T ss_dssp CCCCCCCBCCCEEEETTSCEEECCBCCTTTTTTEEEEEEEETTCCEECSSSCBTTTEEECTTS------CEEESSCCGGG
T ss_pred cccccccCccceeeecCCcEEEEEECcCCCCCCcceEEEEeCCCcccccccCCCCcEEEccCC------cEEEecCCccc
Confidence 456666667777899999999999997654 37899999987664321 1122222222 69999999999
Q ss_pred C-eEEEEEEEcCCCceE-E---EEEEEEeccccCCCCCcc-ccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecc
Q psy7036 81 A-GLYKVKAKNKMGEVA-A---SINLNFSREQIDGLAPTF-LKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVK 154 (254)
Q Consensus 81 ~-G~Y~C~~~~~~~~~~-~---~~~l~v~~~~~~~~~~~~-~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~ 154 (254)
+ |.|+|.+.+..+... . ...|.|...... ..|.+ ........+..|+.+.|.|.+.+.|.+.+.|++++..+.
T Consensus 176 ~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~-~~p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~ 254 (388)
T 2v5m_A 176 GYKSYQCRTKHRLTGETRLSATKGRLVITEPISS-SAPRTPALVQKPLELMVAHTISLLCPAQGFPAPSFRWYKFIEGTT 254 (388)
T ss_dssp GGCCEEEEEEETTTCCEEECSSCBCEEEECCCSC-EEEECCSSCCCCEEEETTSCEEECCCCEEESCCEEEEEEECTTSS
T ss_pred cCeeEEEEeccCCCCceeeccccceEEEecCCcC-CCCcCccccCCceEEeeCCcEEEEEECCCCCCCEEEEEecCCCCc
Confidence 9 999999998764322 1 124455421110 01111 112223457789999999999999999999999754321
Q ss_pred cC----CcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEecCCCCCCCCCCCCeeecCCcccc
Q psy7036 155 ED----KRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQ 230 (254)
Q Consensus 155 ~~----~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~ 230 (254)
.. ...++... + ..|.|.+++.+|.|.|+|.|.|..|.....+.|.|.. +|.+...|....
T Consensus 255 ~~~~~~~~~~~~~~-~-----~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~----------~p~~~~~~~~~~ 318 (388)
T 2v5m_A 255 RKQAVVLNDRVKQV-S-----GTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTA----------PLSAKIDPPTQT 318 (388)
T ss_dssp CEEECCCSSSEEEE-T-----TEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEE----------EEEEEEESSEEE
T ss_pred ccccccccCceecc-c-----CEEEECcCCHHHCeEEEEEEecCCCceeEEEEEEEeC----------CCccccCCCcEE
Confidence 10 11111111 2 2799999999999999999999999888888888874 555666666777
Q ss_pred ccCCCCcEEEEEEEeccCCCceeC
Q psy7036 231 SDDDLNDIVIECRLVGEPEPTISW 254 (254)
Q Consensus 231 ~~~g~~~~~l~C~~~~~p~p~~~W 254 (254)
+.+|+ .+.|.|.+.|+|.|.++|
T Consensus 319 v~~g~-~~~l~C~~~g~p~p~i~W 341 (388)
T 2v5m_A 319 VDFGR-PAVFTCQYTGNPIKTVSW 341 (388)
T ss_dssp ECTTS-CEEEEEEEEEECCCEEEE
T ss_pred ecCCC-CEEEEEEeccccCCeEEE
Confidence 88999 999999999999999998
No 44
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.96 E-value=1.4e-27 Score=185.07 Aligned_cols=186 Identities=23% Similarity=0.412 Sum_probs=145.2
Q ss_pred CCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeC--CEEeeeC-----CcceEEEeecCCcceEEEEEEeccCCCC
Q psy7036 8 APSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRG--ETQLSED-----TRTVMKTTPIGTNKYLVALELDDVIETD 80 (254)
Q Consensus 8 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~--~~~~~~~-----~~~~~~~~~~~~~~~~~~l~i~~~~~~d 80 (254)
+|.|.. +....+.+|++++|.|.+.|.|.+.++|+|+ |..+... .++.+. .. .....|.|.+++.+|
T Consensus 1 ~P~i~~-~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~--~~---~~~~~L~i~~v~~~D 74 (389)
T 2jll_A 1 QPHIIQ-LKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVK--GQ---HGSSSLHIKDVKLSD 74 (389)
T ss_dssp CCEEEE-CCCEEEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEE--EC---SSEEEEEEESCCGGG
T ss_pred CCeEEe-cCceEEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEe--cc---CCcceEEEcccChhh
Confidence 477776 5566788999999999999999999999999 8887642 233222 11 223489999999999
Q ss_pred CeEEEEEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcce
Q psy7036 81 AGLYKVKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHK 160 (254)
Q Consensus 81 ~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~ 160 (254)
+|.|+|.+.|..|.....+.|.|.. +|.+........+..|+.+.|.|.+.+.|.+.+.|++++..+.......
T Consensus 75 ~G~Y~C~a~n~~g~~~~~~~l~V~~------~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~ 148 (389)
T 2jll_A 75 SGRYDCEAASRIGGHQKSMYLDIEY------APKFISNQTIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTN 148 (389)
T ss_dssp CEEEEEEEECSSCEEEEEEEEEEEE------EEEECCSCCEEEECTTCCEEEEECEEEESCCEEEEEETTEESSCTTCTT
T ss_pred CEEEEEEEEeCCCCcceEEEEEEEe------CCEEecCcceEEeccCCEEEEEEEEEecCCCeEEEEECCccCCcccCce
Confidence 9999999999999888888888873 4444444444567889999999999999999999999999887654323
Q ss_pred EEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEe
Q psy7036 161 FSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFD 207 (254)
Q Consensus 161 ~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~ 207 (254)
+....++. .+.|.|.++..+|.|.|+|.|.|..|.......+.+.
T Consensus 149 ~~~~~~~~--~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~ 193 (389)
T 2jll_A 149 LKTYSTGR--KMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALA 193 (389)
T ss_dssp EEEEECSS--CEEEEECCCSTTSSEEEEEEEEETTEEEEEEEEEEEC
T ss_pred EEEeccCC--EEEEEECCCChhhCEEEEEEEEcCCCcEEEEEEEEec
Confidence 33222221 1379999999999999999999999988777777664
No 45
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.96 E-value=1.8e-28 Score=187.40 Aligned_cols=225 Identities=12% Similarity=0.211 Sum_probs=148.6
Q ss_pred CCeeEeC-CCceeecCCCeEEEEEEEeeCC-----------CCceEEEeCCE------Eee-eCCcceEEEeecCCcceE
Q psy7036 8 APSFTQK-PQLRQEDEGNRLIFECQLLCNP-----------KPDIVWFRGET------QLS-EDTRTVMKTTPIGTNKYL 68 (254)
Q Consensus 8 ~p~~~~~-~~~~~v~~g~~v~l~C~~~~~~-----------~~~v~W~~~~~------~~~-~~~~~~~~~~~~~~~~~~ 68 (254)
.+.+... ...+.+.+|+++.|.|.+.+.| .+.+.|+|++. .+. .....++... +.
T Consensus 6 c~~~~~~~~~~v~v~~G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~--~~---- 79 (349)
T 4dep_C 6 CDDWGLDTMRQIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKE--KD---- 79 (349)
T ss_dssp CEEEEECCCCCCEEETTSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCEEEE--TT----
T ss_pred ccccccceeeeEEEecCCeEEEEccccccccccccccccCCCceEEEEECCCCCcccccccccccCceEeec--CC----
Confidence 3444443 5667899999999999998655 48999999873 111 0112222211 11
Q ss_pred EEEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEE-----eeCCCCe
Q psy7036 69 VALELDDVIETDAGLYKVKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRI-----QADPAPT 143 (254)
Q Consensus 69 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~-----~~~~~~~ 143 (254)
.|.|.+++.+|+|.|+|.+.|..+.....+.|.|...+.. .+.....+....+..|+.+.|.|.+ .+.|.+.
T Consensus 80 -~L~i~~~~~~D~G~Y~C~a~n~~~~~~~~~~l~V~~~~~~--~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~ 156 (349)
T 4dep_C 80 -VLWFRPTLLNDTGNYTCMLRNTTYCSKVAFPLEVVQKDSC--FNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPT 156 (349)
T ss_dssp -EEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCTT--SCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCE
T ss_pred -EEEEccCChhhCEEEEEEEecCCceEEEEEEEEEecCCcc--cCcccccCcceeeecCccEEEEcCCCcccccCCCCce
Confidence 7999999999999999999999888888888888742211 1111122334567889999999984 6788999
Q ss_pred EEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCC-Ccc---eEEEEEEEecCCCCCCCCCCC
Q psy7036 144 VIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNEL-GES---NATISLNFDSDDAPVPGEGTK 219 (254)
Q Consensus 144 ~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~-~~~---~~~~~~~v~~~~~~~~~~~~~ 219 (254)
+.|+|++..+... ..+.... ..|.|.+++.+|+|.|+|.|.|.. |.. ...+.|.|..... ...+
T Consensus 157 v~W~k~~~~l~~~--~~~~~~~------~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~----~~~~ 224 (349)
T 4dep_C 157 ITWYMGCYKIQNF--NNVIPEG------MNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPK----NAVP 224 (349)
T ss_dssp EEEEETTEECCSC--SSEEEET------TEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGG----GCCS
T ss_pred EEEeeCCEECCCc--cceeecC------CEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCC----CCCC
Confidence 9999999988543 2222222 279999999999999999999986 443 4566666653211 1124
Q ss_pred CeeecCCccc--cccCCCCcEEEEEEEe----ccCCCceeC
Q psy7036 220 PVFTERPVTK--QSDDDLNDIVIECRLV----GEPEPTISW 254 (254)
Q Consensus 220 p~~~~~~~~~--~~~~g~~~~~l~C~~~----~~p~p~~~W 254 (254)
|.+...+... .+.+|+ .+.|.|.+. |.|.|.++|
T Consensus 225 p~i~~~~~~~~~~v~~G~-~v~l~C~~~~~~~g~p~p~v~W 264 (349)
T 4dep_C 225 PVIHSPNDHVVYEKEPGE-ELLIPCTVYFSFLMDSRNEVWW 264 (349)
T ss_dssp CEEC-----------------CCCEEEEECCCTTCCCEEEE
T ss_pred CeEecCCCceeEEEecCC-cEEEEEEEEEccCCCCCCEEEE
Confidence 6665554332 677888 999999998 578899998
No 46
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.96 E-value=1.2e-28 Score=190.64 Aligned_cols=227 Identities=20% Similarity=0.334 Sum_probs=161.3
Q ss_pred CCCeeEeCCCceee---cCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCC-CCCe
Q psy7036 7 FAPSFTQKPQLRQE---DEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIE-TDAG 82 (254)
Q Consensus 7 ~~p~~~~~~~~~~v---~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~-~d~G 82 (254)
.+|.|...|....+ .+|++++|.|.+.|.|.+.+.|+|+|..+......++... .+ .|.|.++.. .|+|
T Consensus 3 ~~P~~~~~p~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~k~g~~~~~~~~~~~~~~-~~------~L~i~~~~~~~D~G 75 (382)
T 1cs6_A 3 YGPVFEEQPAHTLFPEGSAEEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRLV-AG------DLVISNPVKAKDAG 75 (382)
T ss_dssp EEEEEEECCCCEEEETTCSCCEEEECCEEEEESCCEEEEEETTEECCCSTTSSEEEE-TT------EEEEESCCHHHHCE
T ss_pred CCCEEEECCCcEEEecCCCCCcEEEEEEecCCCCCEEEEEECCEECCcCCCccEEee-CC------eEEEecccccccCE
Confidence 47899999988776 7899999999999999999999999999876543333322 11 699999997 9999
Q ss_pred EEEEEEEcCCCceE-EEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEE-eeCCCCeEEEEECCEecccCCcce
Q psy7036 83 LYKVKAKNKMGEVA-ASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRI-QADPAPTVIWSHSGVQVKEDKRHK 160 (254)
Q Consensus 83 ~Y~C~~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~-~~~~~~~~~W~~~~~~~~~~~~~~ 160 (254)
.|+|.+.|..|... ....|.|... +...........+.+|+.+.|.|.+ .+.|.+.+.|++++..+......+
T Consensus 76 ~Y~C~a~n~~g~~~s~~~~l~v~~~-----~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~ 150 (382)
T 1cs6_A 76 SYQCVATNARGTVVSREASLRFGFL-----QEFSAEERDPVKITEGWGVMFTCSPPPHYPALSYRWLLNEFPNFIPADGR 150 (382)
T ss_dssp EEEEEEEETTEEEECCCEEEEEEEE-----CCCCSSCCCCEEEETTSCEEECCCCCSEESCCEEEEEESSTTCBCCCCSS
T ss_pred EEEEEEEcCCcEEEecceEEEeecc-----ccccccCCCceEEecCCcEEEEeCCCCCCCCcEEEEEECCCccccccCce
Confidence 99999999887643 2455555421 1111122345678899999999995 456788999999987653222222
Q ss_pred EEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceE-----EEEEEEecCCCCCCCCCCCCeeec-CCccccccCC
Q psy7036 161 FSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNA-----TISLNFDSDDAPVPGEGTKPVFTE-RPVTKQSDDD 234 (254)
Q Consensus 161 ~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~p~~~~-~~~~~~~~~g 234 (254)
.....+. ..|.|.+++.+|.|.|+|.+.|..+.... ...+.+..... ...+|.+.. .+....+.+|
T Consensus 151 ~~~~~~~----~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~~~----~~~~P~~~~~~~~~~~~~~G 222 (382)
T 1cs6_A 151 RFVSQTT----GNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAEDA----RQYAPSIKAKFPADTYALTG 222 (382)
T ss_dssp EEECTTT----CCEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCC----CCEEEEEEECCCSEEEEETT
T ss_pred EEEecCc----eEEEEEeeCcccCeeEEEEEEEccccccceeEccceeeccchhhc----ccCCCceeccCCCceEEeCC
Confidence 2222221 16999999999999999999998754322 23444432110 112344443 3556678889
Q ss_pred CCcEEEEEEEeccCCCceeC
Q psy7036 235 LNDIVIECRLVGEPEPTISW 254 (254)
Q Consensus 235 ~~~~~l~C~~~~~p~p~~~W 254 (254)
+ .+.|.|.+.|.|.|.+.|
T Consensus 223 ~-~v~l~C~~~g~p~~~i~W 241 (382)
T 1cs6_A 223 Q-MVTLECFAFGNPVPQIKW 241 (382)
T ss_dssp C-CEEEECEEEEESCCEEEE
T ss_pred C-eEEEEEEEccCCCCEEEE
Confidence 9 999999999999999998
No 47
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.96 E-value=3e-28 Score=200.26 Aligned_cols=206 Identities=19% Similarity=0.362 Sum_probs=157.4
Q ss_pred EeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEEEEEcC
Q psy7036 12 TQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKVKAKNK 91 (254)
Q Consensus 12 ~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~ 91 (254)
...+....+.+|+.++|.|.+.|.|.+.++|+++|..+.... .|.|.+++..|+|.|+|.+.|.
T Consensus 385 ~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~~~~~~----------------~L~i~~~~~~d~G~Y~C~a~n~ 448 (642)
T 1e07_A 385 TISPSYTYYRPGVNLSLSCHAASNPPAQYSWLIDGNIQQHTQ----------------ELFISNITEKNSGLYTCQANNS 448 (642)
T ss_pred eecCCceEecCCCcEEEEEEcCccCCCeEEEEECCEEcCCCc----------------eEEEccCChhhCeEEEEEEEcC
Confidence 445666778999999999999999999999999998765321 5999999999999999999999
Q ss_pred CCceEEE--EEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCc
Q psy7036 92 MGEVAAS--INLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHS 169 (254)
Q Consensus 92 ~~~~~~~--~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~ 169 (254)
.|....+ +.+.|.... .+|.+. ......+..|+.+.|.|.+. .+.+.+.|++++..+....+..+ ..++
T Consensus 449 ~g~~~~s~~~~v~v~~~~---~~p~i~-~~~~~~v~~g~~v~l~C~~~-~~~~~i~W~~~g~~l~~~~~~~~--~~~~-- 519 (642)
T 1e07_A 449 ASGHSRTTVKTITVSAEL---PKPSIS-SNNSKPVEDKDAVAFTCEPE-AQNTTYLWWVNGQSLPVSPRLQL--SNGN-- 519 (642)
T ss_pred CCCCcccceEEEEEeccC---CCceEe-cCCceeecCCCeEEEEEECC-CCCcEEEEEECCEeCCCCCcEEE--cCCC--
Confidence 8765544 444443210 233332 23345677899999999997 47889999999998876554333 2222
Q ss_pred eeeEEEEccCCCCCceeEEEEEEcCCCcce-EEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEeccC
Q psy7036 170 YFASLEIIDVTIEDAGKYKVTAKNELGESN-ATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEP 248 (254)
Q Consensus 170 ~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p 248 (254)
..|.|.++..+|.|.|+|.|.|..|... ..+.|.|... ++.+...+....+.+|+ .+.|.|.+.|.|
T Consensus 520 --~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~---------p~~~~~~~~~~~v~~g~-~~~l~C~~~g~p 587 (642)
T 1e07_A 520 --RTLTLFNVTRNDARAYVCGIQNSVSANRSDPVTLDVLYG---------PDTPIISPPDSSYLSGA-NLNLSCHSASNP 587 (642)
T ss_pred --cEEEEeecChhcCceEEEEeEcCCCCccCCCEEEEEEeC---------CCcceecCCceeEEcCC-cEEEEEEeccCC
Confidence 2799999999999999999999998753 3577777642 22334445566788899 999999999999
Q ss_pred CCceeC
Q psy7036 249 EPTISW 254 (254)
Q Consensus 249 ~p~~~W 254 (254)
.|.++|
T Consensus 588 ~p~v~W 593 (642)
T 1e07_A 588 SPQYSW 593 (642)
T ss_pred CCeEEE
Confidence 999999
No 48
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.96 E-value=5.6e-30 Score=193.10 Aligned_cols=214 Identities=17% Similarity=0.253 Sum_probs=154.6
Q ss_pred CceeecCCCeEEEEEEEeeCC-CCceEEEeCCEEeee--CCcceEEEeecCCcceEEEEEEeccCCCCCeEEEEEEEcCC
Q psy7036 16 QLRQEDEGNRLIFECQLLCNP-KPDIVWFRGETQLSE--DTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKVKAKNKM 92 (254)
Q Consensus 16 ~~~~v~~g~~v~l~C~~~~~~-~~~v~W~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~ 92 (254)
..+.+.+|+++.|.|.+.+.+ .+.++|+|++..+.. ....++... +. .|.|.+++.+|+|.|+|.+.|..
T Consensus 13 ~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~--~~-----~L~i~~v~~~D~G~Y~C~a~n~~ 85 (315)
T 1itb_B 13 IILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQH--KE-----KLWFVPAKVEDSGHYYCVVRNSS 85 (315)
T ss_dssp CCCEEETTSCCCCBCCCCSCCCSSCCCEECTTSCSCSCCCTTSSSEEC--SS-----BEECTTCCGGGCSCCEECCCSSS
T ss_pred eEEEEcCCCcEEEEeeccCcCCCceEEEEeCCCcCccccccCCcEecc--CC-----eEEECCCChhhCEEEEEEEeCCc
Confidence 356789999999999998876 789999999864321 112222211 11 69999999999999999999988
Q ss_pred CceEEEEEEEEeccccCCCCCccccCC---CeeeecCCCeEEEEEEE------eeCCCCeEEEEECCEecccCCcceEEE
Q psy7036 93 GEVAASINLNFSREQIDGLAPTFLKKP---SIRQEDDGKRLLFECRI------QADPAPTVIWSHSGVQVKEDKRHKFSI 163 (254)
Q Consensus 93 ~~~~~~~~l~v~~~~~~~~~~~~~~~~---~~~~~~~g~~~~l~C~~------~~~~~~~~~W~~~~~~~~~~~~~~~~~ 163 (254)
+.....+.+.+.. .+|.+...+ ....+..|+.+.|.|.+ .+.|.+.+.|++++..+..... ++..
T Consensus 86 g~~~~~~~v~v~~-----~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~~-~~~~ 159 (315)
T 1itb_B 86 YCLRIKISAKFVE-----NEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNI-HFSG 159 (315)
T ss_dssp CCCCEECCCEEEC-----CCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCSS-SEEE
T ss_pred eEEEEEEEEEEeC-----CCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCccc-eEee
Confidence 8766666665542 233322111 23457789999999998 7889999999999998865332 2222
Q ss_pred cCCCCceeeEEEEccCCCCCceeEEEEEE-cCCCcc---eEEEEEEEecCCCCCCCCCCCCeeecCCcc-ccccCCCCcE
Q psy7036 164 DKDGHSYFASLEIIDVTIEDAGKYKVTAK-NELGES---NATISLNFDSDDAPVPGEGTKPVFTERPVT-KQSDDDLNDI 238 (254)
Q Consensus 164 ~~~~~~~~~~l~i~~~~~~d~G~y~C~~~-~~~~~~---~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~-~~~~~g~~~~ 238 (254)
. ++ .|.|.+++.+|+|.|+|.+. |..|.. ...+.+.+.... ...+|.+...+.. ..+.+|+ .+
T Consensus 160 ~-~~-----~L~i~~v~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~-----~~~~P~~~~~~~~~~~~~~g~-~v 227 (315)
T 1itb_B 160 V-KD-----RLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEEN-----KPTRPVIVSPANETMEVDLGS-QI 227 (315)
T ss_dssp E-TT-----EEEESSCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCC-----CCCCCEECSCCSEEEECCSSS-CE
T ss_pred c-Cc-----eEEEEeceehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCC-----CCCCCEEecCCCCcEEEeCCC-cE
Confidence 2 22 79999999999999999999 777765 334444333211 1236777665543 4678898 99
Q ss_pred EEEEEEeccCCCceeC
Q psy7036 239 VIECRLVGEPEPTISW 254 (254)
Q Consensus 239 ~l~C~~~~~p~p~~~W 254 (254)
.|.|.+.|.|.|.++|
T Consensus 228 ~l~C~~~g~P~p~i~W 243 (315)
T 1itb_B 228 QLICNVTGQLSDIAYW 243 (315)
T ss_dssp EEEEEEEECTTSEEEE
T ss_pred EEEEEEecCCCCeeEE
Confidence 9999999999999998
No 49
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.96 E-value=2.9e-28 Score=183.40 Aligned_cols=226 Identities=15% Similarity=0.235 Sum_probs=156.2
Q ss_pred ceeecCCCeEEEEEEEe-eCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEEEEEcCCCce
Q psy7036 17 LRQEDEGNRLIFECQLL-CNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKVKAKNKMGEV 95 (254)
Q Consensus 17 ~~~v~~g~~v~l~C~~~-~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~ 95 (254)
.+.+.+|+.+.|.|... +.|.+.++|+|++..+....++.+... + ....|.|.+++.+|+|.|+|.+.|..|..
T Consensus 10 ~~~v~eg~~v~l~~~~~~~~p~~~v~W~k~~~~i~~~~~~~~~~~--~---~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~ 84 (312)
T 2y23_A 10 VVNVDDDGVISLNFECDKMTPKSEFSWSKDYVSTEDSPRLEVESK--G---NKTKMTFKDLGMDDLGIYSCDVTDTDGIA 84 (312)
T ss_dssp EEEECTTCCEEEEEECSSCCTTCCEEEEETTEECTTCTTEEEEEE--T---TEEEEEESSCCGGGCEEEEEEESSSCCCC
T ss_pred eEEEecCCeEEEEEEEeCCCCCcEEEEEECCEECCCCCCEEEEEe--C---CEEEEEECcCCccCCEEEEEEEEeCCCcE
Confidence 45788999999999885 478899999999999886666555432 1 12389999999999999999999988754
Q ss_pred EEEEEEEEeccccCC------CCCccccCCC-eeeecCCCeEEEEEEEe-eCCCCeEEEEECCEecccCCcceEEEcCCC
Q psy7036 96 AASINLNFSREQIDG------LAPTFLKKPS-IRQEDDGKRLLFECRIQ-ADPAPTVIWSHSGVQVKEDKRHKFSIDKDG 167 (254)
Q Consensus 96 ~~~~~l~v~~~~~~~------~~~~~~~~~~-~~~~~~g~~~~l~C~~~-~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~ 167 (254)
. +..+.|....... .+|.+..... ...+.+|+.+.|.|.+. +.|.+.+.|++++..+.......+......
T Consensus 85 ~-s~~l~v~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~ 163 (312)
T 2y23_A 85 S-SYLIDEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNT 163 (312)
T ss_dssp E-EEEECHHHHHHHHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSSSCEEEEETTT
T ss_pred E-EEEEEEeeeeeeecccccCCCCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCCcEEEEEccCC
Confidence 4 4555553211000 0333333222 56788999999999998 889999999999999877655554443222
Q ss_pred CceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEecCC-------CCC----CCCCCCCeeecCCccccccCCCC
Q psy7036 168 HSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDSDD-------APV----PGEGTKPVFTERPVTKQSDDDLN 236 (254)
Q Consensus 168 ~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~~~-------~~~----~~~~~~p~~~~~~~~~~~~~g~~ 236 (254)
. ...|.|.+++.+|.|.|+|.+.+........ +.+.... ++. .....+|.+... ....+.+|+
T Consensus 164 ~--~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~v~~G~- 237 (312)
T 2y23_A 164 G--IIEMFMEKLQDEDEGTYTFQLQDGKATNHST--VVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEY-LSWEVTGEC- 237 (312)
T ss_dssp T--EEEEEESCCCGGGCEEEEEEEESSSCEEEEE--EEECTHHHHHHHHHHHHHHHHHHHHHSSEEEEE-EEEEEETTT-
T ss_pred C--EEEEEEccCCcccCEeEEEEEEeCCceEEEE--EEEcchhhhhhcccccccccchhhccCCceeec-ceEEEeCCC-
Confidence 2 2469999999999999999998654433333 3331000 000 000013444432 235678899
Q ss_pred cEEEEEEEeccCCC-ceeC
Q psy7036 237 DIVIECRLVGEPEP-TISW 254 (254)
Q Consensus 237 ~~~l~C~~~~~p~p-~~~W 254 (254)
.+.|.|.+.+.|.| .++|
T Consensus 238 ~~~l~C~~~~~p~~~~v~W 256 (312)
T 2y23_A 238 NVLLKCKVANIKKETHIVW 256 (312)
T ss_dssp EEEEEEEEESCCSSCEEEE
T ss_pred EEEEEEEEcCCCCCCEEEE
Confidence 99999999999988 8998
No 50
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.96 E-value=2.6e-28 Score=181.77 Aligned_cols=215 Identities=14% Similarity=0.129 Sum_probs=155.8
Q ss_pred CCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEE
Q psy7036 7 FAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKV 86 (254)
Q Consensus 7 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 86 (254)
.+|.+...+....+.+|++++|.|.+.+ .++|++++.... ... ... ....|.|.+++..|+|.|+|
T Consensus 3 p~p~i~~~~~~~~v~~G~~v~L~C~~~~----~v~W~~~~~~~~-----~~~--~~~---~~~~L~i~~~~~~d~G~Y~C 68 (289)
T 3ejj_X 3 PAPVIEPSGPELVVEPGETVTLRCVSNG----SVEWDGPISPYW-----TLD--PES---PGSTLTTRNATFKNTGTYRC 68 (289)
T ss_dssp -CCEEESCSSEEEECTTCCEEEEEECSS----CCEEECSCSSSS-----EEC--CCS---SCCEEEESSCCGGGCEEEEE
T ss_pred CCcEecCCCceEEECCCCCEEEEEEeCC----cEEEccCCCceE-----EEe--ccC---CccEEEEeeeccccCEEEEE
Confidence 4678888888889999999999999976 499998764211 111 111 11279999999999999999
Q ss_pred EEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCe-EEEEE-CCEecccCCcceEEEc
Q psy7036 87 KAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPT-VIWSH-SGVQVKEDKRHKFSID 164 (254)
Q Consensus 87 ~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~-~~W~~-~~~~~~~~~~~~~~~~ 164 (254)
.+.+..+.....+.|.|.. .+..+...+....+.+|+.+.|.|.+.+.+.+. +.|++ ++..+..... +...
T Consensus 69 ~~~~~~~~~~~~~~l~V~~-----~~~~~~~~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~--~~~~ 141 (289)
T 3ejj_X 69 TELEDPMAGSTTIHLYVKD-----PAHSWNLLAQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRKTV--YFFS 141 (289)
T ss_dssp ECCC-----CEEEEEEECC-----SSCSEEESCSEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCTTCC--EEEE
T ss_pred EEeccCCcceeEEEEEEeC-----CCcceecccceEEEecCCceEeEEEccCCCcceEEEEEecCCeecCCCcc--EEEC
Confidence 9998887777788888863 122234455677888999999999998876655 99986 5555543332 3333
Q ss_pred CCCCceeeEEEEccCCCCCceeEEEEEE-cCCCcceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEE
Q psy7036 165 KDGHSYFASLEIIDVTIEDAGKYKVTAK-NELGESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECR 243 (254)
Q Consensus 165 ~~~~~~~~~l~i~~~~~~d~G~y~C~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~ 243 (254)
.++ .|.|.+++.+|.|.|+|.+. +..+.....+.|.|.... ..+|.+...+....+.+|+ .+.|.|.
T Consensus 142 ~~~-----~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~~l~V~~~~------~~~p~i~~~~~~~~~~~g~-~~~l~C~ 209 (289)
T 3ejj_X 142 PWR-----GFIIRKAKVLDSNTYVCKTMVNGRESTSTGIWLKVNRVH------PEPPQIKLEPSKLVRIRGE-AAQIVCS 209 (289)
T ss_dssp TTT-----EEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEESSC------CCCCEEEEESSSEECCSSS-CEEEEEE
T ss_pred CCC-----CEEEeecccccCEEEEEEEEeCCCccccccEEEEEEECC------CCCCeEEecCCceEEEeCC-cEEEEEE
Confidence 333 79999999999999999999 444555666777776421 2367777777777778899 9999999
Q ss_pred Eec-cCCCceeC
Q psy7036 244 LVG-EPEPTISW 254 (254)
Q Consensus 244 ~~~-~p~p~~~W 254 (254)
+.+ .|.|.+.|
T Consensus 210 ~~~~~p~~~i~W 221 (289)
T 3ejj_X 210 ATNAEVGFNVIL 221 (289)
T ss_dssp EEESSSCCEEEE
T ss_pred eCCCCCceEEEE
Confidence 998 78899998
No 51
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.96 E-value=3.5e-29 Score=176.23 Aligned_cols=173 Identities=17% Similarity=0.141 Sum_probs=122.6
Q ss_pred ceeecCCCeEEEEEE---EeeCCCCceEEEeCCEEeee---------------CCcceEEEeecCCcceEEEEEEeccCC
Q psy7036 17 LRQEDEGNRLIFECQ---LLCNPKPDIVWFRGETQLSE---------------DTRTVMKTTPIGTNKYLVALELDDVIE 78 (254)
Q Consensus 17 ~~~v~~g~~v~l~C~---~~~~~~~~v~W~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~l~i~~~~~ 78 (254)
++++.+|++++|.|. +.+.|.+.|+|+|+|..... ..+........ .....|.|.+++.
T Consensus 2 ~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~L~I~~v~~ 78 (203)
T 4fa8_A 2 AVTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRS---ANTFFLVVTAANI 78 (203)
T ss_dssp CCEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEE---TTEEEEEESSCCG
T ss_pred CeEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEc---CCEEEEEEccCCH
Confidence 567899999999996 45678899999997632110 00111111111 1234799999999
Q ss_pred CCCeEEEEEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEeccc--C
Q psy7036 79 TDAGLYKVKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKE--D 156 (254)
Q Consensus 79 ~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~--~ 156 (254)
+|+|.|+|.+.|..|.....+.|.|. .||.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+.. .
T Consensus 79 ~D~G~Y~C~a~n~~g~~~~~~~l~V~------~p~~~~~~~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~~~~ 152 (203)
T 4fa8_A 79 SHDGNYLCRMKLGETEVTKQEHLSVV------KPLTLSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPTA 152 (203)
T ss_dssp GGCEEEEEEEEETTEEEEEEEEEEEE------EEEEEEEEEEECCSSCSCCEEEEEEEEEESCCEEEECCC---------
T ss_pred HHCeEEEEEEEcCCCcEEEEEEEEec------CCceeeecceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCeeecCccc
Confidence 99999999999999988888888886 344444445556678899999999999999999999987655432 2
Q ss_pred CcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceE
Q psy7036 157 KRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNA 200 (254)
Q Consensus 157 ~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~ 200 (254)
...++....++.. ..+.|.+++.+|.|.|+|.|.|..|.+..
T Consensus 153 ~~~r~~~~~~g~l--~il~i~~v~~~D~G~YtC~A~N~~G~a~~ 194 (203)
T 4fa8_A 153 ANGGVMKEKDGSL--SVAVDLSLPKPWHLPVTCVGKNDKEEAHG 194 (203)
T ss_dssp ---CCEECTTSCE--EEEEEEEECSSCCCCEEEEEESSSCEEEE
T ss_pred ccceEEEeCCCCE--EEEEECCCCHHHCEEEEEEEEcCCCEEEE
Confidence 2334445555532 24667789999999999999999998764
No 52
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.96 E-value=3.5e-29 Score=194.42 Aligned_cols=231 Identities=17% Similarity=0.197 Sum_probs=160.5
Q ss_pred CCCCCCeeEeCCCceeecCCCeEEEEEEEee-CCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCe
Q psy7036 4 AEDFAPSFTQKPQLRQEDEGNRLIFECQLLC-NPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAG 82 (254)
Q Consensus 4 ~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G 82 (254)
.+..+|.|...|....+.+|+.++|.|.+.+ .|.+.++|+|+|..+...... ....... .+|.|.+++..|+|
T Consensus 2 ~v~~~P~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~-~~~~~~~-----~~L~i~~~~~~D~G 75 (395)
T 1bih_A 2 PVDKYPVLKDQPAEVLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEHN-AALRKDE-----GSLVFLRPQASDEG 75 (395)
T ss_dssp ---CCCEECCCCSEEEEETTSCEEECCCEESCCSSCEEEEEESSSBCCTTTTT-EEECTTS-----CCEEESSCCGGGCE
T ss_pred CcCCCCEeecCCCceEEeCCCEEEEEEEEecCCCCceEEEEECCcCcccccce-EEEecCC-----ceEEEecCCCCCCc
Confidence 4567899999999999999999999999988 788999999999887665432 2111111 16999999999999
Q ss_pred EEEEEEEcCCCceE-EEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEE-eeCCCCeEEEEECCE---ecccC-
Q psy7036 83 LYKVKAKNKMGEVA-ASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRI-QADPAPTVIWSHSGV---QVKED- 156 (254)
Q Consensus 83 ~Y~C~~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~-~~~~~~~~~W~~~~~---~~~~~- 156 (254)
.|+|.+.|..|... ..+.|.|... ..|.+ .+....+.+|+.+.|.|.+ .+.|.+.+.|++++. .....
T Consensus 76 ~Y~C~a~n~~g~~~s~~~~l~v~~~----~~p~~--~~~~~~~~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~ 149 (395)
T 1bih_A 76 HYQCFAETPAGVASSRVISFRKTYL----IASPA--KTHEKTPIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVT 149 (395)
T ss_dssp EEEEEEEETTEEEECCCEEEEEEEE----ECCCC--EEEEECCBTTEEEEECCCCCEEESCCEEEEEEEETTSCGGGCCC
T ss_pred EEEEEEEeCCCeEEeEEEEEEEEEe----ecCCc--CCcceeeeeCCcEEEEecCCCCCCCCeEEEEecCCCcCcccccc
Confidence 99999999877643 2345554321 11222 2234567789999999995 788999999999862 11111
Q ss_pred -CcceEEEcCCCCceeeEEEEccCCCCCce---eEEEEEEcCCCcceEEEEEEEec-CCCC--CCCCCCCCeeecCCccc
Q psy7036 157 -KRHKFSIDKDGHSYFASLEIIDVTIEDAG---KYKVTAKNELGESNATISLNFDS-DDAP--VPGEGTKPVFTERPVTK 229 (254)
Q Consensus 157 -~~~~~~~~~~~~~~~~~l~i~~~~~~d~G---~y~C~~~~~~~~~~~~~~~~v~~-~~~~--~~~~~~~p~~~~~~~~~ 229 (254)
...++....++ .|.|.+++.+|.| .|+|.+.|..+............ .... .......|.+ .+...
T Consensus 150 ~~~~~~~~~~~~-----~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~ 222 (395)
T 1bih_A 150 DFDRRITAGPDG-----NLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQY--VSKDM 222 (395)
T ss_dssp CCCTTEEECTTS-----CEEEEEECGGGCCSSEEEEEEEECTTCSSCEEEEEEEECCCBCCSSCCCCCCEEEE--ECCSE
T ss_pred cccccEEEcCCC-----cEEEEEEeeccCCCceEEEEEEEecccceEEEeeeEEecccccccccccCCcCcee--cCCce
Confidence 02233344444 6999999999999 99999999988765443322221 1100 0011123444 24555
Q ss_pred cccCCCCcEEEEEEEeccCCCceeC
Q psy7036 230 QSDDDLNDIVIECRLVGEPEPTISW 254 (254)
Q Consensus 230 ~~~~g~~~~~l~C~~~~~p~p~~~W 254 (254)
.+.+|+ .+.|.|.+.|.|.|.++|
T Consensus 223 ~~~~G~-~v~l~C~~~g~p~~~i~W 246 (395)
T 1bih_A 223 MAKAGD-VTMIYCMYGSNPMGYPNY 246 (395)
T ss_dssp EEETTS-CEEEEEEEECSSCCCCEE
T ss_pred EEECCC-cEEEEEEeccCCCCeEEE
Confidence 778899 999999999999999998
No 53
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.96 E-value=1.1e-27 Score=167.77 Aligned_cols=183 Identities=23% Similarity=0.503 Sum_probs=138.1
Q ss_pred CCeeEeCCC--ceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEE
Q psy7036 8 APSFTQKPQ--LRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYK 85 (254)
Q Consensus 8 ~p~~~~~~~--~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 85 (254)
+|.|...+. ...+.+|++++|.|.+.+.|.+.+.|++++..+....+..+. .... .|.|.+++..|+|.|+
T Consensus 2 pP~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~--~~~~-----~L~i~~~~~~d~G~Y~ 74 (192)
T 2va4_A 2 MPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILK--GSNT-----ELTVRNIINSDGGPYV 74 (192)
T ss_dssp CCEEECSCCEEEEETTSCCCEEEECEEECSSCCEEEEEETTEECCCSSSEEEE--TTTT-----EEEECSCCGGGCEEEE
T ss_pred CCcccCCCCCcEEEEecCCCEEEEEeeccCCCCeEEEEECCeEcCCCccEEEe--CCee-----EEEEecCChhcCcEEE
Confidence 688876654 467889999999999998899999999999998776554332 1111 7999999999999999
Q ss_pred EEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEEC--CEecccCC---cce
Q psy7036 86 VKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHS--GVQVKEDK---RHK 160 (254)
Q Consensus 86 C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~--~~~~~~~~---~~~ 160 (254)
|.+.+..+.....+.|.|.. +|.+... ....+..|+.+.|.|.+.+.|.+.+.|+++ +..+.... ..+
T Consensus 75 C~~~~~~~~~~~~~~l~V~~------~p~~~~~-~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~ 147 (192)
T 2va4_A 75 CRATNKAGEDEKQAFLQVFV------QPHIIQL-KNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGR 147 (192)
T ss_dssp EEEEETTEEEEEEEEEEEEE------EEEEEEE-CCEEECTTSEEEEEEEEEEESCCEEEEEETTTTEEECTTCBCTTSC
T ss_pred EEEEccccccceEEEEEEEc------cCccccc-CcceEEeCCeEEEEEEecCCCCCcEEEEeCCCCceeeccccccCCc
Confidence 99999888877777787763 3333222 234566799999999999999999999998 55443211 111
Q ss_pred EEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEE
Q psy7036 161 FSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNF 206 (254)
Q Consensus 161 ~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v 206 (254)
+...... ..+.|.|.+++.+|.|.|+|.|.|..|....++.|.|
T Consensus 148 ~~~~~~~--~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 191 (192)
T 2va4_A 148 IEVKGQH--GSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDI 191 (192)
T ss_dssp EEEEEET--TEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred EEEeecc--CceEEEEecCCcccCEEEEEEEEecCCceEEEEEEEe
Confidence 1111111 1247999999999999999999999999888887776
No 54
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.96 E-value=5.2e-28 Score=183.54 Aligned_cols=225 Identities=15% Similarity=0.237 Sum_probs=151.3
Q ss_pred CCeeEeCCCceeecCCCeEEEEEEEeeC----CCCceEEEeCC--EE-------------eeeCCcceEEEeecCCcceE
Q psy7036 8 APSFTQKPQLRQEDEGNRLIFECQLLCN----PKPDIVWFRGE--TQ-------------LSEDTRTVMKTTPIGTNKYL 68 (254)
Q Consensus 8 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~----~~~~v~W~~~~--~~-------------~~~~~~~~~~~~~~~~~~~~ 68 (254)
++.+...+....+.+|++++|.|.+.+. +.+.+.|++++ .. +......++.... .....
T Consensus 14 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~--~~~~~ 91 (331)
T 3u83_A 14 PSQVVQVNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLR--PSFTD 91 (331)
T ss_dssp -------CEEEEEETTCCEEECCBCSSCCSSCEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESS--CSSSB
T ss_pred CcceEEcCCcEEEEecCCEEEeeecCCCCCCCceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecc--cCCCC
Confidence 4456677788899999999999999765 44579999953 21 1111112222211 11122
Q ss_pred EEEEEeccCCCCCeEEEEE-EEcCCCceEEEEEEEEeccccCCCCCcc--ccCCCeeeecCC---CeEEEEEE-EeeCCC
Q psy7036 69 VALELDDVIETDAGLYKVK-AKNKMGEVAASINLNFSREQIDGLAPTF--LKKPSIRQEDDG---KRLLFECR-IQADPA 141 (254)
Q Consensus 69 ~~l~i~~~~~~d~G~Y~C~-~~~~~~~~~~~~~l~v~~~~~~~~~~~~--~~~~~~~~~~~g---~~~~l~C~-~~~~~~ 141 (254)
.+|.|.+++..|+|.|+|. +.+..+.....+.|.|.. +|.+ ........+.+| +.+.|.|. ..+.|.
T Consensus 92 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~------~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~ 165 (331)
T 3u83_A 92 GTIRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMA------KPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPP 165 (331)
T ss_dssp CCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEB------CCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSC
T ss_pred ceEEEcccCcccCcEEEEEEEecCCCccEEEEEEEEec------CCcceeecCCCceeecCCCccceEEEEEEecCCcCC
Confidence 3799999999999999998 455566677778888863 3332 223445566777 77999998 888999
Q ss_pred CeEEEEECCEecccCCcceEEEcCCCC-ceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEecCCCCCCCCCCCC
Q psy7036 142 PTVIWSHSGVQVKEDKRHKFSIDKDGH-SYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDSDDAPVPGEGTKP 220 (254)
Q Consensus 142 ~~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p 220 (254)
+.+.|++++...... ......++. ...+.|.|..+..+|.|.|+|.|.|..+....++.|.|.. +|
T Consensus 166 ~~i~W~~~~~~~~~~---~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~----------~P 232 (331)
T 3u83_A 166 SVVSWETRLKGEAEY---QEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQY----------EP 232 (331)
T ss_dssp CEEEEEESSCCEEEE---EEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEEE----------EE
T ss_pred ceEEEEcCCCCcccc---ceeECCCCcEEEEEEEEEEeccccCCCEEEEEEecCCCcceeeEEEEEec----------CC
Confidence 999999963221110 111112222 2345799999999999999999999988877777777764 45
Q ss_pred eeec-CCccccccCCCCcEEEEEEEeccCCCc-eeC
Q psy7036 221 VFTE-RPVTKQSDDDLNDIVIECRLVGEPEPT-ISW 254 (254)
Q Consensus 221 ~~~~-~~~~~~~~~g~~~~~l~C~~~~~p~p~-~~W 254 (254)
.+.. .+....+.+|+ .+.|.|.+.|+|.|. +.|
T Consensus 233 ~~~~~~~~~~~~~~g~-~~~l~C~~~g~p~p~~i~W 267 (331)
T 3u83_A 233 EVTIEGFDGNWYLQRM-DVKLTCKADANPPATEYHW 267 (331)
T ss_dssp EEEEECCCSCCBTTCC-CEEEEEEEEEESCCCEEEE
T ss_pred eEEEecCCCceEeCCC-eEEEEEeCcCCCCCCEEEE
Confidence 5543 33444577888 999999999999998 998
No 55
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.96 E-value=4.7e-28 Score=174.55 Aligned_cols=197 Identities=21% Similarity=0.360 Sum_probs=145.9
Q ss_pred CCCCeeEeCC----CceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCC
Q psy7036 6 DFAPSFTQKP----QLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDA 81 (254)
Q Consensus 6 ~~~p~~~~~~----~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 81 (254)
..+|.|...+ ....+.+|++++|.|.+.+.|.+.+.|++++..+....+........+ ...|.|.+++..|+
T Consensus 13 ~~~P~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~----~~~L~i~~~~~~d~ 88 (231)
T 3ojm_B 13 KRAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQ----HWSLIMESVVPSDK 88 (231)
T ss_dssp CEEEEESCGGGGCCSCEEEETTSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGG----GTEEEECSCCGGGC
T ss_pred ccCCccccccccCceeEEEccCCCEEEEEecccCCCCeEEEEECCccccccccccceeeecC----cceEEEecCCcccC
Confidence 3467776655 677899999999999999999999999999998866544321111111 11799999999999
Q ss_pred eEEEEEEEcCCCceEEEEEEEEeccccCCCCCccc-cCCCeeeecCCCeEEEEEEEeeCCCCeEEEEE----CCEecccC
Q psy7036 82 GLYKVKAKNKMGEVAASINLNFSREQIDGLAPTFL-KKPSIRQEDDGKRLLFECRIQADPAPTVIWSH----SGVQVKED 156 (254)
Q Consensus 82 G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~-~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~----~~~~~~~~ 156 (254)
|.|+|.+.|..+.......|.|..... .+|... ..+....+..|+.+.|.|.+.+.|.+.+.|++ ++..+...
T Consensus 89 G~Y~C~~~n~~~~~~~~~~l~V~~~~~--~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~~~ 166 (231)
T 3ojm_B 89 GNYTCVVENEYGSINHTYHLDVVERSR--HRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPD 166 (231)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEECCCC--CCCEECTTCSCCEEEETTCCEEEECCEECSSCCEEEEEEECCBTTBSBCTT
T ss_pred EEEEEEEecccCcccccEEEEEEcCCC--CCCceeeccCCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCCccccCC
Confidence 999999999988877788888864221 122222 23445678889999999999999999999999 77666543
Q ss_pred CcceEEEc---CCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEec
Q psy7036 157 KRHKFSID---KDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDS 208 (254)
Q Consensus 157 ~~~~~~~~---~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~ 208 (254)
........ .......+.|.|.++..+|.|.|+|.|.|..|....++.|.|..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 221 (231)
T 3ojm_B 167 GLPYLKVLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIGQANQSAWLTVLP 221 (231)
T ss_dssp SCBCEEEEEECSTTCSCTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CcceEeEecccccccCCccEEEEecCCHHHCeEEEEEEEeccceEeeEEEEEEec
Confidence 32222111 10111123799999999999999999999999998888888875
No 56
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.96 E-value=8.3e-28 Score=171.73 Aligned_cols=189 Identities=24% Similarity=0.416 Sum_probs=140.9
Q ss_pred CCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEE
Q psy7036 6 DFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYK 85 (254)
Q Consensus 6 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 85 (254)
..+|.|...|....+.+|++++|.|.+.+.|.+.+.|+++|..+............. .......+.|.+++..|+|.|+
T Consensus 7 ~~~P~i~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~-~~~~~~~l~i~~v~~~d~G~Y~ 85 (217)
T 2vr9_A 7 YQSPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFK-DGALFFYRTMQGKKEQDGGEYW 85 (217)
T ss_dssp CCCCEEEECCCCEEECTTSCEEECCEEECSSCCEEEEEETTEECCCSSSSSSEEECT-TSCEEESSCCBSSSCBCCEEEE
T ss_pred cCCCEEecCCCceEEeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCCccceeEEec-CCceEEEEEeccCCcccCceEE
Confidence 468899999999999999999999999988899999999999887643222221111 2222223478899999999999
Q ss_pred EEEEcCCCce-EEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEE-eeCCCCeEEEEECCEecccCCc-----
Q psy7036 86 VKAKNKMGEV-AASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRI-QADPAPTVIWSHSGVQVKEDKR----- 158 (254)
Q Consensus 86 C~~~~~~~~~-~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~-~~~~~~~~~W~~~~~~~~~~~~----- 158 (254)
|.+.|..+.. .....|.|.. .++.+...+....+..|+.+.|.|.+ .+.|.+.+.|++++..+.....
T Consensus 86 C~~~n~~g~~~~~~~~l~v~~-----~~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~~~~~~ 160 (217)
T 2vr9_A 86 CVAKNRVGQAVSRHASLQIAV-----LRDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGA 160 (217)
T ss_dssp EEEEETTEEEECCCEEEEECE-----ECCSCSBCCCCEEECTTSCEEECCBCCCEESCCEEEEEETTEEECCCCCC---C
T ss_pred EEEecCCCccccccceEEEEE-----eCCCcEECCCccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCccccccccc
Confidence 9999988764 2345555542 23444455556778899999999998 8899999999999988763321
Q ss_pred -ceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEE
Q psy7036 159 -HKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLN 205 (254)
Q Consensus 159 -~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~ 205 (254)
.+.....++ .|.|.+++.+|.|.|+|.|.|..|....+..+.
T Consensus 161 ~~~~~~~~~~-----~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~~l 203 (217)
T 2vr9_A 161 SSRVRIVDGG-----NLLISNVEPIDEGNYKCIAQNLVGTRESSYAKL 203 (217)
T ss_dssp CCSEEEETTT-----EEEESSCCSTTCEEEEEEEEETTEEEECCCEEE
T ss_pred CCcEEecCCC-----cEEEeeCCHHHCeEEEEEEEcccceeccccEEE
Confidence 122222232 799999999999999999999999876554333
No 57
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.96 E-value=3.3e-28 Score=191.41 Aligned_cols=234 Identities=15% Similarity=0.213 Sum_probs=150.2
Q ss_pred CCeeEeCCCceeecCCCeEEEEEEEee-CCCC-ceEEEeCCEEeeeCCcceEEEee--cCCcceEEEEEEeccCCCCCeE
Q psy7036 8 APSFTQKPQLRQEDEGNRLIFECQLLC-NPKP-DIVWFRGETQLSEDTRTVMKTTP--IGTNKYLVALELDDVIETDAGL 83 (254)
Q Consensus 8 ~p~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~-~v~W~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~i~~~~~~d~G~ 83 (254)
+|.+...+....+.+|+.++|.|.+.+ .|.+ .++|+|+|..+............ ++.....+.|.|.+++.+|+|.
T Consensus 116 ~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~ 195 (438)
T 1qgc_4 116 APTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNS 195 (438)
T ss_dssp CCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCE
T ss_pred CCEEEecCCChhhccCCceEEEEEEccccCCCcEEEEEECCEEcCCCceeccccccCCCCcEEEEEEEEEeCcccCCCCe
Confidence 566665443333456889999999987 6766 89999999987654111111111 1111224589999999999999
Q ss_pred EEEEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCC--CCeEEEEEC--CEeccc----
Q psy7036 84 YKVKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADP--APTVIWSHS--GVQVKE---- 155 (254)
Q Consensus 84 Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~--~~~~~W~~~--~~~~~~---- 155 (254)
|+|.+.|..+.......+.+. .++.....+....+.+|+.+.|.|.+.+.| .+.+.|+|+ +..+..
T Consensus 196 Y~C~a~n~~~~~~~~~~~~~~------~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~ 269 (438)
T 1qgc_4 196 YTCEATHKTSTSPIVKSFNRN------ECEVMLVESGGGLVKPGGSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWVATI 269 (438)
T ss_dssp EEEEEEETTCSSCEEEEEETT------C-CCEEEEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEE
T ss_pred EEEEEEecccCCceecccccc------cceeEEecCCceEEecCCcEEEEEEEcccccCCcEEEEEECCCCCCcEEEEEE
Confidence 999999988765333333221 111222223455688999999999999988 678999996 433210
Q ss_pred -----------CCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCC-----cceEEEEEEEecCCCCCCCCCCC
Q psy7036 156 -----------DKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELG-----ESNATISLNFDSDDAPVPGEGTK 219 (254)
Q Consensus 156 -----------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~~~ 219 (254)
....++....+.......|.|.+++.+|+|.|+|.|.|..+ .......+.|... ...+
T Consensus 270 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~------~~~~ 343 (438)
T 1qgc_4 270 SSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSADTAMYYCVRREDGGDEGFAYWGQGTVVTVSAA------KTTP 343 (438)
T ss_dssp CTTSCCEECCGGGTTTEEEEEETTTTEEEEEECSCCGGGCCEEEEEECCSSSCCCCCSBCCCEEEEECSS------CCBC
T ss_pred eecCCceecCcccCCcEEEEeecCCCeEEEEECCCChhhCEEEEEEEEccCCCccceeeCCCEEEEEecC------CCCC
Confidence 00111222111111124799999999999999999998543 2223445666531 1124
Q ss_pred CeeecCCccccccCCCCcEEEEEEEecc-CCC-ceeC
Q psy7036 220 PVFTERPVTKQSDDDLNDIVIECRLVGE-PEP-TISW 254 (254)
Q Consensus 220 p~~~~~~~~~~~~~g~~~~~l~C~~~~~-p~p-~~~W 254 (254)
|.+...+....+.+|+ .+.|.|.+.|. |.| .++|
T Consensus 344 P~v~~~~~~~~~~~g~-~v~L~C~~~g~~P~~~~v~W 379 (438)
T 1qgc_4 344 PSVYPLAPGSAAAAAS-MVTLGCLVKGYFPEPVTVTW 379 (438)
T ss_dssp CEEEEECCCGGGCCSS-EEEEEEEEESCBSSCCEEEE
T ss_pred CeEEEcCcccccccCC-cEEEEEEeccccCCCcEEEE
Confidence 5554433334567888 99999999997 888 8988
No 58
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.96 E-value=2e-27 Score=172.41 Aligned_cols=195 Identities=22% Similarity=0.391 Sum_probs=143.3
Q ss_pred CCCeeEeC----CCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceE-EEeecCCcceEEEEEEeccCCCCC
Q psy7036 7 FAPSFTQK----PQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVM-KTTPIGTNKYLVALELDDVIETDA 81 (254)
Q Consensus 7 ~~p~~~~~----~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~ 81 (254)
.+|.|... +....+.+|+++.|.|.+.+.|.+.+.|++++..+........ ...... ..|.|.+++..|+
T Consensus 10 ~~P~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~-----~~L~i~~v~~~d~ 84 (241)
T 3grw_A 10 GAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQ-----WSLVMESVVPSDR 84 (241)
T ss_dssp -CCEESSGGGGSCCEEEEETTSEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEEEGGG-----TEEEECSCCGGGC
T ss_pred CCceeEcCCCCCCcceEEcCCCeEEEEEEecCCCCceeEEEECCcccCCCCcccceeeeccc-----eEEEEEeCCcccC
Confidence 46777644 4467889999999999999989999999999998865543311 111111 1799999999999
Q ss_pred eEEEEEEEcCCCceEEEEEEEEeccccCCCCCcc-ccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEE----CCEecccC
Q psy7036 82 GLYKVKAKNKMGEVAASINLNFSREQIDGLAPTF-LKKPSIRQEDDGKRLLFECRIQADPAPTVIWSH----SGVQVKED 156 (254)
Q Consensus 82 G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~-~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~----~~~~~~~~ 156 (254)
|.|+|.+.+..+.......|.|..... .++.+ ...+....+..|+.+.|.|.+.+.|.+.+.|++ ++..+...
T Consensus 85 G~Y~C~~~~~~~~~~~~~~l~V~~~~~--~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~ 162 (241)
T 3grw_A 85 GNYTCVVENKFGSIRQTYTLDVLERSP--HRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPD 162 (241)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEECCCC--CCCEEEECTTCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCTT
T ss_pred EEEEEEEeecCCceEEEEEEEEeccCC--CCceeecCCCccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccCCC
Confidence 999999999888877788888764211 12222 223445667889999999999999999999999 77766544
Q ss_pred CcceEEEc----CCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEec
Q psy7036 157 KRHKFSID----KDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDS 208 (254)
Q Consensus 157 ~~~~~~~~----~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~ 208 (254)
........ .......+.|.|.++..+|.|.|+|.|.|..|....++.|.|..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 218 (241)
T 3grw_A 163 GTPYVTVLKSWISESVEADVRLRLANVSERDGGEYLCRATNFIGVAEKAFWLSVHG 218 (241)
T ss_dssp TCCCEEEEEEEECSBSEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEC--
T ss_pred CceeeeeeeEeeeeecCCceEEEECcCCcccCcEEEEEEecCcceEEEEEEEEecC
Confidence 33222111 11112335799999999999999999999999998888888875
No 59
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.96 E-value=2.9e-28 Score=188.48 Aligned_cols=214 Identities=19% Similarity=0.320 Sum_probs=156.8
Q ss_pred CCceeecCCCeEEEEEEE-eeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEEEEEcCCC
Q psy7036 15 PQLRQEDEGNRLIFECQL-LCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKVKAKNKMG 93 (254)
Q Consensus 15 ~~~~~v~~g~~v~l~C~~-~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~ 93 (254)
+....+.+|++++|.|.+ .+.|.+.+.|++++..+......+........ .|.|.+++..|+|.|+|.+.+..+
T Consensus 108 ~~~~~v~~G~~v~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~-----~L~i~~~~~~d~G~Y~C~~~n~~g 182 (382)
T 1cs6_A 108 RDPVKITEGWGVMFTCSPPPHYPALSYRWLLNEFPNFIPADGRRFVSQTTG-----NLYIAKTEASDLGNYSCFATSHID 182 (382)
T ss_dssp CCCEEEETTSCEEECCCCCSEESCCEEEEEESSTTCBCCCCSSEEECTTTC-----CEEESSCCGGGCEEEEEEEEEEET
T ss_pred CCceEEecCCcEEEEeCCCCCCCCcEEEEEECCCccccccCceEEEecCce-----EEEEEeeCcccCeeEEEEEEEccc
Confidence 455678999999999996 45688899999998754322222221111111 699999999999999999998775
Q ss_pred ceEE-----EEEEEEeccccCCCCCcccc-CCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCC
Q psy7036 94 EVAA-----SINLNFSREQIDGLAPTFLK-KPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDG 167 (254)
Q Consensus 94 ~~~~-----~~~l~v~~~~~~~~~~~~~~-~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~ 167 (254)
.... ...+.+........+|.+.. .+....+..|+.+.|.|.+.+.|.+.+.|++++..+... . ...+
T Consensus 183 ~~~~~~~s~~~~l~v~~~~~~~~~P~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~----~-~~~~- 256 (382)
T 1cs6_A 183 FITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFAFGNPVPQIKWRKLDGSQTSK----W-LSSE- 256 (382)
T ss_dssp TEEEEEECCCEEEEEESCCCCCEEEEEEECCCSEEEEETTCCEEEECEEEEESCCEEEEEECCSCCSCC----C-SBSS-
T ss_pred cccceeEccceeeccchhhcccCCCceeccCCCceEEeCCCeEEEEEEEccCCCCEEEEEECCcccccE----E-ecCC-
Confidence 3222 23444432111112333322 344667889999999999999999999999988765421 1 1111
Q ss_pred CceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEecc
Q psy7036 168 HSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGE 247 (254)
Q Consensus 168 ~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~ 247 (254)
..|.|.+++.+|.|.|+|.+.|..|.......|.|.. +|.+...+....+.+|+ .+.|.|.+.|.
T Consensus 257 ----~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~----------~p~~~~~~~~~~~~~g~-~~~l~C~~~g~ 321 (382)
T 1cs6_A 257 ----PLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHA----------QPDWLDVITDTEADIGS-DLRWSCVASGK 321 (382)
T ss_dssp ----SEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEE----------EEEEEECCCCEEEETTC-CEEEECEEEEE
T ss_pred ----cEEEEccCChhhCEEEEEEEEcCCCeEEEEEEEEEec----------CCCcccCCCccEEcCCC-eEEEEEEeeee
Confidence 2799999999999999999999999888888888874 56677677777888899 99999999999
Q ss_pred CCCceeC
Q psy7036 248 PEPTISW 254 (254)
Q Consensus 248 p~p~~~W 254 (254)
|.|.++|
T Consensus 322 p~p~v~W 328 (382)
T 1cs6_A 322 PRPAVRW 328 (382)
T ss_dssp SCCEEEE
T ss_pred cCCEEEE
Confidence 9999998
No 60
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.96 E-value=2.2e-27 Score=169.67 Aligned_cols=177 Identities=16% Similarity=0.284 Sum_probs=139.2
Q ss_pred CCCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEE
Q psy7036 5 EDFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLY 84 (254)
Q Consensus 5 ~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 84 (254)
.+..+.|...|....+.+|+++.|.|.+.+.|.+.+.|++++..+..... ..|.|.+++..|+|.|
T Consensus 15 ~~~~~~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~--------------~~L~i~~v~~~d~G~Y 80 (218)
T 3k0w_A 15 VPRGSKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNGNT--------------SELIFNAVHVKDAGFY 80 (218)
T ss_dssp ----CCEEECCCCEEEETTSBEEEECEETTTTSSEEEEEETTEECTTCCS--------------SEEEETTCCGGGCEEE
T ss_pred cCCCCEEEECCCCeEEeCCCcEEEEeeecCCCCCEEEEEECCEECCCCCC--------------CEEEEccCChhhCeEe
Confidence 34578899999999999999999999999888999999999998754321 1799999999999999
Q ss_pred EEEEEcCCCce-EEEEEEEEecccc---------CCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecc
Q psy7036 85 KVKAKNKMGEV-AASINLNFSREQI---------DGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVK 154 (254)
Q Consensus 85 ~C~~~~~~~~~-~~~~~l~v~~~~~---------~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~ 154 (254)
+|.+.+..+.. ...+.|.|..... ...+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+.
T Consensus 81 ~C~~~n~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~~~~~~ 160 (218)
T 3k0w_A 81 VCRVNNNFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLT 160 (218)
T ss_dssp EEEEECTTCCEECCCEEEEEECCCGGGCTTCCSBCCSSCEEEECCCCEEECTTCCEEEECEEEBSSCCEEEEEETTEECT
T ss_pred EEEEEcCCCCceeeEEEEEEEccCcccccccccccCCCceEEECCCceeecCCCcEEEEEEecccCCCeEEEEECCEECC
Confidence 99999987753 4456677754211 0112444555566778899999999999999999999999998875
Q ss_pred cCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCc-ceEEEEEEEec
Q psy7036 155 EDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGE-SNATISLNFDS 208 (254)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~-~~~~~~~~v~~ 208 (254)
.... ..|.|.+++.+|.|.|+|.|.|..|. .+..+.|.|..
T Consensus 161 ~~~~-------------~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~ 202 (218)
T 3k0w_A 161 HETK-------------KLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIIDE 202 (218)
T ss_dssp TCCS-------------SEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEECC
T ss_pred CCCC-------------CEEEEeecChhcCEEEEEEEEcCCCCceeeeEEEEEeC
Confidence 4321 17999999999999999999998887 46667777764
No 61
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.96 E-value=4e-27 Score=193.64 Aligned_cols=207 Identities=20% Similarity=0.330 Sum_probs=152.9
Q ss_pred eEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEEEEEc
Q psy7036 11 FTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKVKAKN 90 (254)
Q Consensus 11 ~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 90 (254)
+...+....+.+|+.++|.|.+.+.|.+.++|+++|..+... ..|.|.+++..|+|.|+|.+.|
T Consensus 206 ~~~~~~~~~~~~G~~~~l~C~~~g~p~~~i~W~~~g~~i~~~----------------~~L~i~~~~~~d~G~Y~C~a~n 269 (642)
T 1e07_A 206 PTISPLNTSYRSGENLNLSCHAASNPPAQYSWFVNGTFQQST----------------QELFIPNITVNNSGSYTCQAHN 269 (642)
T ss_pred cEEecCCcccccCCEEEEEEEcCCCCCcEEEEEECCeEcccC----------------CceEEecccccCCeEEEEEEEe
Confidence 344556667899999999999988999999999999877321 1699999999999999999999
Q ss_pred CCCceEE--EEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCC
Q psy7036 91 KMGEVAA--SINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGH 168 (254)
Q Consensus 91 ~~~~~~~--~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~ 168 (254)
..|.... .+.|.|.... .+|.+. ......+..|+.+.|.|.+.+.| +.+.|++++..+....+..+. .++
T Consensus 270 ~~g~~~~s~~~~v~v~~~~---~~p~i~-~~~~~~~~~g~~v~l~C~~~~~p-~~v~W~~~g~~l~~~~~~~~~--~~~- 341 (642)
T 1e07_A 270 SDTGLNRTTVTTITVYAEP---PKPFIT-SNNSNPVEDEDAVALTCEPEIQN-TTYLWWVNNQSLPVSPRLQLS--NDN- 341 (642)
T ss_pred CCCceEEeeeEEEEEEccC---CCCEEE-cCCceeEecCCcEEEEEECCCCC-ccEEEEECCccCCCcCCEEEe--CCC-
Confidence 8876543 3455554210 122222 22334455678899999998876 689999999887655443332 222
Q ss_pred ceeeEEEEccCCCCCceeEEEEEEcCCCcc-eEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEecc
Q psy7036 169 SYFASLEIIDVTIEDAGKYKVTAKNELGES-NATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGE 247 (254)
Q Consensus 169 ~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~ 247 (254)
..|.|.++..+|.|.|+|.|.|..|.. ...+.|.|...+ +.....+....+.+|+ .+.|.|.+.|+
T Consensus 342 ---~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p---------~~~~~~~~~~~~~~g~-~~~l~C~~~g~ 408 (642)
T 1e07_A 342 ---RTLTLLSVTRNDVGPYECGIQNELSVDHSDPVILNVLYGP---------DDPTISPSYTYYRPGV-NLSLSCHAASN 408 (642)
T ss_pred ---CEEEEeccCcccCeeEEEEEeCCCCCcceeeEEEEEEcCC---------CCCeecCCceEecCCC-cEEEEEEcCcc
Confidence 279999999999999999999998864 455677776411 1122234555678898 99999999999
Q ss_pred CCCceeC
Q psy7036 248 PEPTISW 254 (254)
Q Consensus 248 p~p~~~W 254 (254)
|.|.++|
T Consensus 409 p~~~i~W 415 (642)
T 1e07_A 409 PPAQYSW 415 (642)
T ss_pred CCCeEEE
Confidence 9999999
No 62
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.96 E-value=1.4e-28 Score=190.58 Aligned_cols=225 Identities=20% Similarity=0.316 Sum_probs=156.3
Q ss_pred CCCeeEeCCCc-eeecCCCeEEEEEEEeeCCCCceEEEe-CCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCC----
Q psy7036 7 FAPSFTQKPQL-RQEDEGNRLIFECQLLCNPKPDIVWFR-GETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETD---- 80 (254)
Q Consensus 7 ~~p~~~~~~~~-~~v~~g~~v~l~C~~~~~~~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d---- 80 (254)
.+|.|...|.. ..+.+|+.++|.|.+.|.|.+.++|+| +|..+......... ..++ .|.|.+++..|
T Consensus 2 ~~P~f~~~p~~~~~~~~G~~v~l~C~~~g~p~p~v~W~k~~g~~~~~~~~~~~~-~~~~------~L~i~~~~~~d~~~~ 74 (388)
T 2v5m_A 2 KGPVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQI-SSDG------KLVFPPFRAEDYRQE 74 (388)
T ss_dssp EEEEEEECCCSEEEEETTTCEEEECEEEEESCCEEEEEETTSCBCCCBTTTBEE-CSTT------EEEECCCCGGGCCHH
T ss_pred CCCchhhCCCceEEEEcCccEEEEEECCCCCCCEEEEEcCCCCccccCCCceEE-cCCc------eEEecccChhhcccc
Confidence 47899988876 457899999999999999999999999 78777654433321 1111 79999999987
Q ss_pred --CeEEEEEEEcCCCce-EEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCC---CeEEEEECCEecc
Q psy7036 81 --AGLYKVKAKNKMGEV-AASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPA---PTVIWSHSGVQVK 154 (254)
Q Consensus 81 --~G~Y~C~~~~~~~~~-~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~---~~~~W~~~~~~~~ 154 (254)
+|.|+|.+.|..|.. ...+.|.+. .+|.+........+.+|+.+.|.|.+.+.+. +.+.|++++..+.
T Consensus 75 ~d~G~Y~C~a~n~~g~~~s~~~~v~v~------~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~~~v~W~~~~~~~~ 148 (388)
T 2v5m_A 75 VHAQVYACLARNQFGSIISRDVHVRAV------VAQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENY 148 (388)
T ss_dssp HHEEEEEEEEEETTEEEECCCEEEEEE------CCCCCCCBCCCEEEETTSCEEECCBCCTTTTTTEEEEEEEETTCCEE
T ss_pred ccCceEEEEEEccCCeEEecceEEEEc------cccccccCccceeeecCCcEEEEEECcCCCCCCcceEEEEeCCCccc
Confidence 999999999988763 345566664 3344444445567889999999999887653 6799999987653
Q ss_pred cCC---cceEEEcCCCCceeeEEEEccCCCCCc-eeEEEEEEcCCCcceE-E---EEEEEecCCCCCCCCCCCCeeecCC
Q psy7036 155 EDK---RHKFSIDKDGHSYFASLEIIDVTIEDA-GKYKVTAKNELGESNA-T---ISLNFDSDDAPVPGEGTKPVFTERP 226 (254)
Q Consensus 155 ~~~---~~~~~~~~~~~~~~~~l~i~~~~~~d~-G~y~C~~~~~~~~~~~-~---~~~~v~~~~~~~~~~~~~p~~~~~~ 226 (254)
... ..+.....++ .|.|.+++.+|. |.|+|.+.|..+.... . ..+.|....... .+..|.+..
T Consensus 149 ~~~~~~~~~~~~~~~~-----~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~--~p~~~~~~~-- 219 (388)
T 2v5m_A 149 FPGAEYDGKYLVLPSG-----ELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSS--APRTPALVQ-- 219 (388)
T ss_dssp CSSSCBTTTEEECTTS-----CEEESSCCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCSCE--EEECCSSCC--
T ss_pred ccccCCCCcEEEccCC-----cEEEecCCccccCeeEEEEeccCCCCceeeccccceEEEecCCcCC--CCcCccccC--
Confidence 221 1223333333 699999999999 9999999998643321 1 234444311000 000111222
Q ss_pred ccccccCCCCcEEEEEEEeccCCCceeC
Q psy7036 227 VTKQSDDDLNDIVIECRLVGEPEPTISW 254 (254)
Q Consensus 227 ~~~~~~~g~~~~~l~C~~~~~p~p~~~W 254 (254)
....+.+|+ .+.|.|.+.|+|.|.+.|
T Consensus 220 ~~~~v~~G~-~v~l~C~~~g~p~p~v~W 246 (388)
T 2v5m_A 220 KPLELMVAH-TISLLCPAQGFPAPSFRW 246 (388)
T ss_dssp CCEEEETTS-CEEECCCCEEESCCEEEE
T ss_pred CceEEeeCC-cEEEEEECCCCCCCEEEE
Confidence 223467788 999999999999999998
No 63
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.96 E-value=1.8e-27 Score=169.38 Aligned_cols=179 Identities=16% Similarity=0.271 Sum_probs=136.4
Q ss_pred cCCCeEEEEEEEeeC-CCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEEEEEcCCCceEEEE
Q psy7036 21 DEGNRLIFECQLLCN-PKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKVKAKNKMGEVAASI 99 (254)
Q Consensus 21 ~~g~~v~l~C~~~~~-~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~ 99 (254)
-.++.+.|.|.+.+. |.+.++|+|+|..+....+..+.... ....|.|.+++.+|+|.|+|.+.|..+.....+
T Consensus 15 c~~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~~~~~~~~~~-----~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~ 89 (212)
T 2r15_A 15 STAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTG-----EQIWLQINEPTPNDKGKYVMELFDGKTGHQKTV 89 (212)
T ss_dssp ECSSEEEEEEEBSSCCSSCEEEEEETTEECCCCSSEEEEEET-----TEEEEEEESCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred EcCceEEEEEEEeccCCCceEEEEECCEEccCCCeEEEEEeC-----CEEEEEECCCCcccCEEEEEEEecCCcceEEEE
Confidence 467788888888774 58899999999999876665543322 123799999999999999999999888776666
Q ss_pred EEEEecc---------------ccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEc
Q psy7036 100 NLNFSRE---------------QIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSID 164 (254)
Q Consensus 100 ~l~v~~~---------------~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~ 164 (254)
.|.|... .....++.....+....+..|+.+.|.|.+.+.|.+.+.|++++..+.......+...
T Consensus 90 ~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~ 169 (212)
T 2r15_A 90 DLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQTDHCNLKFE 169 (212)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTCCEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEE
T ss_pred EEEEeeccchhhhccccCcccccccCCCcccccCCCcEEEccCCeEEEEEEEcCCCCceEEEEECCeECccCCCEEEEEc
Confidence 6654310 0000122233345566788999999999999999999999999999876665554443
Q ss_pred CCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEe
Q psy7036 165 KDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFD 207 (254)
Q Consensus 165 ~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~ 207 (254)
.++ .+.|.|.+++.+|.|.|+|.|.|..|....++.|.|.
T Consensus 170 ~~~---~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 209 (212)
T 2r15_A 170 AGR---TAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVF 209 (212)
T ss_dssp TTT---EEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCC---EEEEEEcCcchHHCeEEEEEEEcCCCcEEEEEEEEEE
Confidence 222 1489999999999999999999999998888888876
No 64
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.96 E-value=5.6e-28 Score=182.27 Aligned_cols=220 Identities=11% Similarity=0.186 Sum_probs=150.0
Q ss_pred CCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEE
Q psy7036 6 DFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYK 85 (254)
Q Consensus 6 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 85 (254)
..+|.|...|. ..+.+|++++|.|.+.+. .+.+.|+|+|..+....... . ....|.|.+++.+|+|.|+
T Consensus 22 ~~~P~i~~~p~-~~v~~G~~v~L~C~~~~~-~~~~~W~k~g~~~~~~~~~~----~-----~~~~L~I~~v~~~D~G~Y~ 90 (316)
T 3vh8_G 22 QDKPFLSAWPS-AVVPRGGHVTLRCHYRHR-FNNFMLYKEDRIHIPIFHGR----I-----FQESFNMSPVTTAHAGNYT 90 (316)
T ss_dssp --CCEEEEESC-SEEETTSCEEEEEEBTTB-CCSEEEEESSCSSSCHHHHC----C-----BSSCEEECSCCGGGCEEEE
T ss_pred CCCCEeeccCC-CccCCCCCEEEEEEccCC-CceEEEEeCCCccceeecCC----c-----ceEEEEECCCCcccCeEEE
Confidence 35788888887 568899999999999876 67899999998653311100 0 0116999999999999999
Q ss_pred EEEEcCCC-----ceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcce
Q psy7036 86 VKAKNKMG-----EVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHK 160 (254)
Q Consensus 86 C~~~~~~~-----~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~ 160 (254)
|.+.+..+ .....+.|.|... ..+|.+...+... +.+|+.++|.|.+. .+.+.+.|++++..+.......
T Consensus 91 C~a~~~~~~~~~~~~s~~~~l~V~~~---~~~p~~~~~~~~~-v~~G~~v~L~C~~~-~~~~~~~w~k~g~~~~~~~~~~ 165 (316)
T 3vh8_G 91 CRGSHPHSPTGWSAPSNPVVIMVTGN---HRKPSLLAHPGPL-VKSGERVILQCWSD-IMFEHFFLHKEGISKDPSRLVG 165 (316)
T ss_dssp EEEBCSSSSSSBCCCCCCEEEEEECS---SCCCEEEEESCSE-EETTCCEEEEEEES-SCCSEEEEEETTCCSCCEEEEC
T ss_pred EEEEcCCCCcceecCCCcEEEEEecC---CCCCeEEecCCCc-cCCCCeEEEEEcCC-CCCcEEEEEECCCccccceeee
Confidence 99986332 2334566666531 1233443333333 77899999999984 5567899999987664221111
Q ss_pred EEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcc-----eEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCC
Q psy7036 161 FSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGES-----NATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDL 235 (254)
Q Consensus 161 ~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~ 235 (254)
.... ......|.|.+++.+|+|.|+|.|.|..+.. ...+.|.|.. ...+|.+...+.. .+.+|+
T Consensus 166 ~~~~---~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~-------~~~~p~i~~~~~~-~v~~G~ 234 (316)
T 3vh8_G 166 QIHD---GVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTG-------PYEKPSLSAQPGP-KVQAGE 234 (316)
T ss_dssp EEET---TEEEEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEEC-------SSCCCEEEEESCS-CCCTTS
T ss_pred eecC---CCceEEEEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEecC-------CCCCCeEEeCCCC-eecCCC
Confidence 1110 1122479999999999999999999987742 4455666653 1235666665543 578898
Q ss_pred CcEEEEEEEeccCCCceeC
Q psy7036 236 NDIVIECRLVGEPEPTISW 254 (254)
Q Consensus 236 ~~~~l~C~~~~~p~p~~~W 254 (254)
.+.|.|.+. .|.+.+.|
T Consensus 235 -~v~L~C~~~-~~~~~~~W 251 (316)
T 3vh8_G 235 -SVTLSCSSR-SSYDMYHL 251 (316)
T ss_dssp -CCEEEEEES-SCCSEEEE
T ss_pred -cEEEEEECC-CCCcEEEE
Confidence 999999997 46677877
No 65
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.96 E-value=1e-27 Score=185.57 Aligned_cols=172 Identities=27% Similarity=0.471 Sum_probs=138.6
Q ss_pred eCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCE-EeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEEEEEcC
Q psy7036 13 QKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGET-QLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKVKAKNK 91 (254)
Q Consensus 13 ~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~ 91 (254)
..+....+.+|+++.|.|.+.|.|.+.+.|++++. .+....+ . .... ..|.|.+++.+|+|.|+|.+.|.
T Consensus 210 ~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~~~--~--~~~~-----~~L~I~~v~~~D~G~Y~C~a~N~ 280 (384)
T 3kld_A 210 QFPETVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARKAR--R--HKSN-----GILEIPNFQQEDAGSYECVAENS 280 (384)
T ss_dssp ECCSEEEEETTSCEEEEEEEEEESCCEEEEEETTCCCCCTTCE--E--CTTS-----CEEEECSCCGGGCEEEEEEEEET
T ss_pred cCCCceEecCCCcEEEEEEEeecCCCcEEEEeCCCccccccce--e--cCCC-----cEEEECCCChhhCEEEEEEEEcC
Confidence 34666778999999999999999999999999544 4432211 1 1111 17999999999999999999999
Q ss_pred CCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCcee
Q psy7036 92 MGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYF 171 (254)
Q Consensus 92 ~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (254)
.|.......|.|. .+|.+........+..|+.+.|.|.+.|.|.|.+.|+|++..+....... .. ++
T Consensus 281 ~G~~~~~~~l~v~------~~P~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~--~~-~~---- 347 (384)
T 3kld_A 281 RGKNVAKGQLTFY------AQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNGDPLLTRDRIQ--IE-QG---- 347 (384)
T ss_dssp TEEEEEEEEEEEE------EEEEEEECCCCEEECTTCCEEEECEEEEESCCEEEEEETTEECCCBTTEE--EE-TT----
T ss_pred CCeEEEEEEEEEe------cCCccccCCCceEecCCCCEEEEeECCccCCCeEEEEECCEECCCCccEE--Ee-CC----
Confidence 9988888888886 34555555566778899999999999999999999999999886544432 22 22
Q ss_pred eEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEe
Q psy7036 172 ASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFD 207 (254)
Q Consensus 172 ~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~ 207 (254)
.|.|.++..+|+|.|+|.|.|..|....+..|.|.
T Consensus 348 -~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~a~L~V~ 382 (384)
T 3kld_A 348 -TLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVI 382 (384)
T ss_dssp -EEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred -EEEEeecChhhCEEEEEEEEeCCceEEeceEEEEe
Confidence 79999999999999999999999999888888875
No 66
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.95 E-value=5.9e-27 Score=181.89 Aligned_cols=174 Identities=21% Similarity=0.382 Sum_probs=139.2
Q ss_pred CCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEEEEEcCCCc
Q psy7036 15 PQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKVKAKNKMGE 94 (254)
Q Consensus 15 ~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 94 (254)
+....+.+|+.+.|.|.+.+.|.+.+.|++++..+......++........ ..|.|.+++..|+|.|+|.+.|..|.
T Consensus 219 ~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~---~~L~i~~~~~~d~G~Y~C~a~n~~g~ 295 (395)
T 1bih_A 219 SKDMMAKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSG---KRLLFKTTLPEDEGVYTCEVDNGVGK 295 (395)
T ss_dssp CCSEEEETTSCEEEEEEEECSSCCCCEEEETTEECCCCTTSSEESCSSSTT---SEEEESSCCGGGCEEEEEEECCSSSS
T ss_pred CCceEEECCCcEEEEEEeccCCCCeEEEEECCEEcCCCCceeEEEEecCCC---ceEEEccCChhhCEEEEEEEEeCCCC
Confidence 556788999999999999999999999999999887654443332211111 16999999999999999999999888
Q ss_pred eEE-EEEEEEeccccCCCCCccccCCCe-eeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceee
Q psy7036 95 VAA-SINLNFSREQIDGLAPTFLKKPSI-RQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFA 172 (254)
Q Consensus 95 ~~~-~~~l~v~~~~~~~~~~~~~~~~~~-~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (254)
... .+.|.|.. +|.+...+.. ..+..|+.+.|.|.+.+.|.+.+.|++++..+... ++....+
T Consensus 296 ~~~~~~~l~V~~------~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~---~~~~~~~------ 360 (395)
T 1bih_A 296 PQKHSLKLTVVS------APKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPLSGG---RATVTDS------ 360 (395)
T ss_dssp CEEEEEEEEEEE------EEEEEECCCSEEEECTTSCEEEECEEEEESCCCCEEEETTEECCSS---SEEEETT------
T ss_pred ceEEEEEEEEEc------CCccccCCCcceEecCCCeEEEEEEECcccCCeeEEEECCEECCCC---ceEEECC------
Confidence 655 78888873 4445444444 67889999999999999999999999999987643 2333222
Q ss_pred EEEEccCCCCCceeEEEEEEcCCCcceEEEEEEE
Q psy7036 173 SLEIIDVTIEDAGKYKVTAKNELGESNATISLNF 206 (254)
Q Consensus 173 ~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v 206 (254)
.|.|.++..+|.|.|+|.|.|..|....++.|.|
T Consensus 361 ~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~V 394 (395)
T 1bih_A 361 GLVIKGVKNGDKGYYGCRATNEHGDKYFETLVQV 394 (395)
T ss_dssp EEEESSCCSTTCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEEeeCCcccCEEEEEEEEccCCCceEEEEEEE
Confidence 7999999999999999999999999888887766
No 67
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.95 E-value=3e-27 Score=176.17 Aligned_cols=187 Identities=20% Similarity=0.359 Sum_probs=142.5
Q ss_pred CCCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEE
Q psy7036 5 EDFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLY 84 (254)
Q Consensus 5 ~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 84 (254)
+..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+......++.....+ .|.|.+++..|+|.|
T Consensus 97 v~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~------~L~i~~~~~~d~G~Y 170 (291)
T 1qz1_A 97 IFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNN------YLQIRGIKKTDEGTY 170 (291)
T ss_dssp EECCSEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEETTSCSSTTCCTTEEECTTS------CEEETTCCGGGCEEE
T ss_pred eeccccccCCCCcccccCCCeEEEEEEeccCCCCEEEEEECCEEcccCCCceEEEccCC------cEEEccCccccCeEE
Confidence 34567888888888899999999999999999999999999987755444333333222 699999999999999
Q ss_pred EEEEEcCCCce--EEEEEEEEeccccCCCCCccccCC--CeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCc--
Q psy7036 85 KVKAKNKMGEV--AASINLNFSREQIDGLAPTFLKKP--SIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKR-- 158 (254)
Q Consensus 85 ~C~~~~~~~~~--~~~~~l~v~~~~~~~~~~~~~~~~--~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~-- 158 (254)
+|.+.|..+.. ...+.+.|. .+|.+.... ....+..|+.+.|.|.+.+.|.+.+.|++++..+.....
T Consensus 171 ~C~a~n~~~~~~~~~~~~l~v~------~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~ 244 (291)
T 1qz1_A 171 RCEGRILARGEINFKDIQVIVN------VPPTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEEEDD 244 (291)
T ss_dssp EEEEEEGGGTEEEEEEEEEEEE------EEEEEEESCSEEEEETTSCCCEEEEEEEEEESCCEEEEEETTEECCCC--CC
T ss_pred EEEEEecCCCceeeEEEEEEEe------cCCcccccccccccccccCceEEEEEEEEEeCCCcEEEEECCEECcCCCCCC
Confidence 99999866432 344555554 233333222 244677899999999999999999999999998865531
Q ss_pred ceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEe
Q psy7036 159 HKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFD 207 (254)
Q Consensus 159 ~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~ 207 (254)
.++....++ +.|.|.++..+|.|.|+|.|.|..|.....+.|.|.
T Consensus 245 ~~~~~~~~~----~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 289 (291)
T 1qz1_A 245 EKHIFSDDS----SELTIRNVDKNDEAEYVCIAENKAGEQDASIHLKVF 289 (291)
T ss_dssp SSEEECTTS----CEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred cceEEcCCC----cEEEEEecChhcCEEEEEEEEeCCCceEEEEEEEEE
Confidence 233333332 279999999999999999999999998888888875
No 68
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.95 E-value=1.8e-27 Score=169.24 Aligned_cols=182 Identities=19% Similarity=0.279 Sum_probs=132.6
Q ss_pred CeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEee----------eCCcceEEEeecCCcceEEEEEEeccCC
Q psy7036 9 PSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLS----------EDTRTVMKTTPIGTNKYLVALELDDVIE 78 (254)
Q Consensus 9 p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 78 (254)
..|...+....+.+|+++.|.|.+.+.|.+.+.|++++..+. .....++.... ..|.|.+++.
T Consensus 2 ~~v~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-------~~L~i~~v~~ 74 (212)
T 1f97_A 2 GSVYTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSS-------SGITFSSVTR 74 (212)
T ss_dssp CEEECSCSEEEEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEET-------TEEEESCCCG
T ss_pred ceEEecCCCeEEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEeec-------eeEEEcccCc
Confidence 467778888899999999999999988899999999775421 11111222111 2799999999
Q ss_pred CCCeEEEEEEEcCCC--ceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEE-EeeCCCCeEEEEECCE-ecc
Q psy7036 79 TDAGLYKVKAKNKMG--EVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECR-IQADPAPTVIWSHSGV-QVK 154 (254)
Q Consensus 79 ~d~G~Y~C~~~~~~~--~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~-~~~~~~~~~~W~~~~~-~~~ 154 (254)
.|+|.|+|.+.+..| .....+.|.|.. +|.+........+..|+.+.|.|. ..+.|.+.+.|++++. .+.
T Consensus 75 ~D~G~Y~C~~~~~~g~~~~~~~~~l~V~~------~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~ 148 (212)
T 1f97_A 75 KDNGEYTCMVSEEGGQNYGEVSIHLTVLV------PPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLT 148 (212)
T ss_dssp GGCEEEEEEEEETTSSSEEEEEEEEEEEB------CCCCCEEECCSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC
T ss_pred ccCeEEEEEEEccCCCcccEEEEEEEEEc------CCCCcccCCccccCCCCeEEEEEEcccCcCCCEEEEEeCCccccc
Confidence 999999999999876 445667777763 333322223346778999999999 7889999999999998 765
Q ss_pred cCCcc-------eEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcc--eEEEEEEEe
Q psy7036 155 EDKRH-------KFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGES--NATISLNFD 207 (254)
Q Consensus 155 ~~~~~-------~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~--~~~~~~~v~ 207 (254)
..... .+...... ..|.|.++..+|.|.|+|.|.|..|.. +..+.|.|.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~----~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~V~ 206 (212)
T 1f97_A 149 ADAKKTRAFMNSSFTIDPKS----GDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAV 206 (212)
T ss_dssp -----CBSCSSSCEEECTTT----CCEEESSCCGGGCEEEEEEEECSSSCCEECCCEEEEEE
T ss_pred ccccccccccCceeEecCCC----ceEEEEecChhhCcEEEEEEccccCCccccceEEEEEE
Confidence 43321 12222111 279999999999999999999999987 556666665
No 69
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.95 E-value=2.6e-27 Score=177.97 Aligned_cols=220 Identities=13% Similarity=0.203 Sum_probs=143.8
Q ss_pred ceeecCCCeEEEEEEEee-CCCCceEEEeCCEEee---------------eCCcceEEEeecCCcceEEEEEEeccCCCC
Q psy7036 17 LRQEDEGNRLIFECQLLC-NPKPDIVWFRGETQLS---------------EDTRTVMKTTPIGTNKYLVALELDDVIETD 80 (254)
Q Consensus 17 ~~~v~~g~~v~l~C~~~~-~~~~~v~W~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d 80 (254)
.+.+.+|++++|.|.+.+ .+.+.++|+|++.... .....++.... .....++|.|.+++.+|
T Consensus 8 ~vtv~~G~~v~L~C~v~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~sL~I~~v~~~D 85 (308)
T 4fom_A 8 HVTAVWGKNVSLKCLIEVNETITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKN--YSLNDATITLHNIGFSD 85 (308)
T ss_dssp SCEEETTSCEEECCBCCCSSCEEEEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEESC--CSSSBCCEEECSCCGGG
T ss_pred EeEEEcCCcEEEEEEecCCCCCcEEEEEECCCCCCceEEEecCCCCceecCcccceEEeec--cCCCceEEEEccCCHHH
Confidence 567889999999999864 4456799998643211 01111121111 11122379999999999
Q ss_pred CeEEEEEEEcC-CCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEE-eeCCCCeEEEEECCEecccCCc
Q psy7036 81 AGLYKVKAKNK-MGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRI-QADPAPTVIWSHSGVQVKEDKR 158 (254)
Q Consensus 81 ~G~Y~C~~~~~-~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~-~~~~~~~~~W~~~~~~~~~~~~ 158 (254)
+|.|+|.+.+. .+.......+.+... ..+.....+.......|+.+.|.|.+ .+.|.+.+.|++++..+....
T Consensus 86 ~G~Y~C~a~n~~~~~~~~~~~~~v~~~----~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~~- 160 (308)
T 4fom_A 86 SGKYICKAVTFPLGNAQSSTTVTVLVE----PTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEMESTT- 160 (308)
T ss_dssp CEEEEEEEEETTTEEEEEEEEEEEEBC----CEEEEEECSSCCCTTCSCEEEEEEEEEEEBSCCEEEECCCSSBCCEEE-
T ss_pred CEEEEEEEeeCCCcceeeeeEEEeeec----cccccccccceeEEcCCceEEEEEEecCCcCCceEEEEECCccccccc-
Confidence 99999999875 445555666666531 11112223334445568899999985 578999999999987764321
Q ss_pred ceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEecCCCCCCCCCCCCeeecCCcc-ccccCCCCc
Q psy7036 159 HKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDSDDAPVPGEGTKPVFTERPVT-KQSDDDLND 237 (254)
Q Consensus 159 ~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~-~~~~~g~~~ 237 (254)
...........+.|.|.....+|.|.|+|.|.|..+.......+.+... .+|.+...+.. ..+..|+ .
T Consensus 161 --~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~--------~~P~~~~~~~~~~~~~~g~-~ 229 (308)
T 4fom_A 161 --TSFPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQ--------YAPEVSVTGYDGNWFVGRK-G 229 (308)
T ss_dssp --EECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCC--------EEEEECCBCCCSCEETTCC-S
T ss_pred --ceeeeecccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEe--------cCCeeEEcccceeeeeccc-c
Confidence 1111222233457999999999999999999998876654444443321 24555444433 3445566 9
Q ss_pred EEEEEEEeccCCC-ceeC
Q psy7036 238 IVIECRLVGEPEP-TISW 254 (254)
Q Consensus 238 ~~l~C~~~~~p~p-~~~W 254 (254)
+.|.|.+.|.|.| .+.|
T Consensus 230 v~l~C~~~g~P~p~~v~W 247 (308)
T 4fom_A 230 VNLKCNADANPPPFKSVW 247 (308)
T ss_dssp CEEECCEEEESCEEEEEC
T ss_pred EEEEEEEecCCCCcEEEE
Confidence 9999999999998 5888
No 70
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.95 E-value=2.1e-27 Score=186.80 Aligned_cols=226 Identities=18% Similarity=0.231 Sum_probs=150.8
Q ss_pred eeEeCCCceeecCCCeEEEEEEEeeCCC----CceEEEeCC--EEe---e---------eCCcceEEEeecCCcceEEEE
Q psy7036 10 SFTQKPQLRQEDEGNRLIFECQLLCNPK----PDIVWFRGE--TQL---S---------EDTRTVMKTTPIGTNKYLVAL 71 (254)
Q Consensus 10 ~~~~~~~~~~v~~g~~v~l~C~~~~~~~----~~v~W~~~~--~~~---~---------~~~~~~~~~~~~~~~~~~~~l 71 (254)
.|++.|..+.+.+|++++|.|.+.+.+. +.+.|+|++ ..+ . ...++... .. ...+.|
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~--~~---~~~~~L 77 (438)
T 1qgc_4 3 VLTQSPASLAVSLGQRATISCRASESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGS--GS---RTDFTL 77 (438)
T ss_dssp CEEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEE--EE---TTEEEE
T ss_pred ceEecCCeEEeeCCCCEEEEEecCCCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEE--cc---CCcEEE
Confidence 4667788889999999999999987765 489999963 211 1 01222221 11 123479
Q ss_pred EEeccCCCCCeEEEEEEEcCCCce-EEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEee-CCCC-eEEEEE
Q psy7036 72 ELDDVIETDAGLYKVKAKNKMGEV-AASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQA-DPAP-TVIWSH 148 (254)
Q Consensus 72 ~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~-~~~W~~ 148 (254)
.|.+++.+|+|.|+|.+.|..+.. .....|.|... ..+|.+...........|+.+.|.|.+.+ .|.+ .+.|++
T Consensus 78 ~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~---~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k 154 (438)
T 1qgc_4 78 TIDPVEADDVATYYCQQSNEVPLTFGAGTKLDLKRA---DAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKI 154 (438)
T ss_dssp EESSCCGGGCEEEEEEECSSTTCCBCCCEEEEECCC---CBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEE
T ss_pred EeCCCcCcCCeeEEEEEecCCCccccCceeEEecCC---CCCCEEEecCCChhhccCCceEEEEEEccccCCCcEEEEEE
Confidence 999999999999999999877642 33456666421 12444433222222335779999999987 6777 899999
Q ss_pred CCEecccCCcceEEE--cCCCC-ceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEecCCCCCCCCCCCCeeecC
Q psy7036 149 SGVQVKEDKRHKFSI--DKDGH-SYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDSDDAPVPGEGTKPVFTER 225 (254)
Q Consensus 149 ~~~~~~~~~~~~~~~--~~~~~-~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~~ 225 (254)
++..+.......... ..++. ...+.|.|.++..+|+|.|+|.|.|..+.......+.... .+.....
T Consensus 155 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~----------~~~~~~~ 224 (438)
T 1qgc_4 155 DGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNE----------CEVMLVE 224 (438)
T ss_dssp TTEEECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSCEEEEEETTC-----------CCEEEE
T ss_pred CCEEcCCCceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCCceeccccccc----------ceeEEec
Confidence 998876541111111 12221 2245899999999999999999999888764444433210 1122223
Q ss_pred CccccccCCCCcEEEEEEEeccC--CCceeC
Q psy7036 226 PVTKQSDDDLNDIVIECRLVGEP--EPTISW 254 (254)
Q Consensus 226 ~~~~~~~~g~~~~~l~C~~~~~p--~p~~~W 254 (254)
+....+.+|+ .+.|.|.+.|.| .+.+.|
T Consensus 225 ~~~~~v~~G~-~v~L~C~~~g~p~~~~~v~W 254 (438)
T 1qgc_4 225 SGGGLVKPGG-SLKLSCTASGFIFNRCAMSW 254 (438)
T ss_dssp ECCEEECTTC-CEEEEEEEESSCGGGSCEEE
T ss_pred CCceEEecCC-cEEEEEEEcccccCCcEEEE
Confidence 4555688899 999999999998 568888
No 71
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.95 E-value=2.7e-27 Score=180.55 Aligned_cols=235 Identities=12% Similarity=0.212 Sum_probs=144.3
Q ss_pred eCCCceeecCCCeEEEEEEEeeC--CCCceEEEeC--CEEee-----------------eCCcceEEEeecCCcceEEEE
Q psy7036 13 QKPQLRQEDEGNRLIFECQLLCN--PKPDIVWFRG--ETQLS-----------------EDTRTVMKTTPIGTNKYLVAL 71 (254)
Q Consensus 13 ~~~~~~~v~~g~~v~l~C~~~~~--~~~~v~W~~~--~~~~~-----------------~~~~~~~~~~~~~~~~~~~~l 71 (254)
..|....+.+|++++|.|.+.+. +.+.+.|||+ +..+. ...++.+... .......|
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~---~~~~~~~L 81 (344)
T 1za6_B 5 VQSGAEVVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTAD---TSASTAYV 81 (344)
T ss_dssp EECCCEEECTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEE---TTTTEEEE
T ss_pred eCCCCeEEeCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEe---cCCCEEEE
Confidence 34556789999999999999875 3678999986 32211 0122222211 11233489
Q ss_pred EEeccCCCCCeEEEEEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeC-CC-CeEEEEEC
Q psy7036 72 ELDDVIETDAGLYKVKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQAD-PA-PTVIWSHS 149 (254)
Q Consensus 72 ~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~-~~~~W~~~ 149 (254)
.|.+++.+|+|.|+|.+.+..+.......|.|.... ..+|.+........+..|+.+.|.|.+.+. |. +.+.|+++
T Consensus 82 ~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~~--~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~ 159 (344)
T 1za6_B 82 ELSSLRSEDTAVYFCTRSLNMAYWGQGTLVTVSSAS--TKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSG 159 (344)
T ss_dssp EECSCCGGGCEEEEEEETTTTCEECCCEEEEECSSC--CBCCEEEEECCSCTTTSSSEEEEEEEEEEEBSSCCCEEETTT
T ss_pred EECCCCcccCEEEEEEEecCcceecCcEEEEEecCC--CCCCeEEEccccccccCCCcEEEEEEEeeEECCCeEEEEecC
Confidence 999999999999999999865444445667775211 123333322222335689999999999886 54 68999999
Q ss_pred CEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEecC-----------CCC---CCC
Q psy7036 150 GVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDSD-----------DAP---VPG 215 (254)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~~-----------~~~---~~~ 215 (254)
+..+............+.+...+.|.|.++..+| |.|+|.|.|..+.......+.+... ... ...
T Consensus 160 g~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~ 238 (344)
T 1za6_B 160 ALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCGGGSSGGGSGG 238 (344)
T ss_dssp TBCTTEEECCCEECTTSCEEEEEEEEEETTHHHH-BCEEEEEEEGGGTEEEEEEECCCCC--------------------
T ss_pred CccCceeECCCeECCCCCEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCccceEeecccccccccccCCCCCCccccccCC
Confidence 8764211111111111222234579999888878 9999999998876544433321100 000 001
Q ss_pred CCCCCeeecCCccccccCCCCcEEEEEEEecc-CC-CceeC
Q psy7036 216 EGTKPVFTERPVTKQSDDDLNDIVIECRLVGE-PE-PTISW 254 (254)
Q Consensus 216 ~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~-p~-p~~~W 254 (254)
...+|.+...+.......|+ .+.|.|.+.|. |+ +.++|
T Consensus 239 ~~~~P~v~~~~~~~~~~~~~-~~~L~C~~~g~~P~~~~v~W 278 (344)
T 1za6_B 239 QPREPQVYTLPPSRDELTKN-QVSLTCLVKGFYPSDIAVEW 278 (344)
T ss_dssp CCBCCEEEEECCCGGGGGSS-SEEEEEEEEEEBSSCCEEEE
T ss_pred CCcCCEEEEeCCChHhccCC-cEEEEEEEeeEECCCeEEEE
Confidence 12356555443333345688 79999999996 43 57888
No 72
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.95 E-value=3.9e-27 Score=175.57 Aligned_cols=185 Identities=16% Similarity=0.358 Sum_probs=137.7
Q ss_pred CCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEE
Q psy7036 6 DFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYK 85 (254)
Q Consensus 6 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 85 (254)
..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+......+......+ .|.|.+++..|+|.|+
T Consensus 96 ~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~------~L~i~~v~~~d~G~Y~ 169 (291)
T 2wim_A 96 YQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANN------NLQILNINKSDEGIYR 169 (291)
T ss_dssp ECCCBCCSCCCSEEEETTSCEEECCCCBCSSCCEEEEECC----CBCCCSSEEECTTS------CEEETTCCGGGCEEEE
T ss_pred cCCcceEeCCCChhhcCCCCEEEEEEEccCCCCEEEEEECCccccccCCceEEEccCC------CEEEEecchhhCEEEE
Confidence 3456666677777899999999999999889999999999988765433333333222 6999999999999999
Q ss_pred EEEEcCCCceE--EEEEEEEeccccCCCCCccccCCC--eeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceE
Q psy7036 86 VKAKNKMGEVA--ASINLNFSREQIDGLAPTFLKKPS--IRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKF 161 (254)
Q Consensus 86 C~~~~~~~~~~--~~~~l~v~~~~~~~~~~~~~~~~~--~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~ 161 (254)
|.+.+..+... ..+.+.|. .+|.+..... ...+..|+.+.|.|.+.+.|.+.+.|++++..+.......
T Consensus 170 C~~~n~~~~~~~~~~~~~~v~------~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~- 242 (291)
T 2wim_A 170 CEGRVEARGEIDFRDIIVIVN------VPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYI- 242 (291)
T ss_dssp EEEEETTTTEEEEEEEEEEEE------BCCCCBCSCSEEECCSSSCCEEEEECBCCCBSCCEEEEEETTEECCCTTTEE-
T ss_pred EEEEECCCCeeEEeeEEEEec------cCCccccCcccccceecCCCeEEEEEEeecCCCCeEEEEECCEECcCCccEE-
Confidence 99998775433 34455554 3444433332 3456789999999999999999999999999887655432
Q ss_pred EEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEec
Q psy7036 162 SIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDS 208 (254)
Q Consensus 162 ~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~ 208 (254)
....+ ..|.|.++..+|.|.|+|.|.|..|....++.+.|..
T Consensus 243 -~~~~~----~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~ 284 (291)
T 2wim_A 243 -LKGSN----TELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFV 284 (291)
T ss_dssp -ECSTT----CEEEEESCCSTTCEEEEEEEEETTEEEEEEEEEEC--
T ss_pred -EcCCc----cEEEEeeCCcccCEEEEEEEEECCCceeeeEEEEEEE
Confidence 22222 2799999999999999999999999999998888764
No 73
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.95 E-value=4.5e-27 Score=173.01 Aligned_cols=200 Identities=16% Similarity=0.194 Sum_probs=143.4
Q ss_pred CCeeEeCCCceeecCCCeEEEEEEEee-CCCC--ceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEecc---CCCCC
Q psy7036 8 APSFTQKPQLRQEDEGNRLIFECQLLC-NPKP--DIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDV---IETDA 81 (254)
Q Consensus 8 ~p~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~--~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~---~~~d~ 81 (254)
+|.+... ..+.+|++++|.|.+.+ .|.+ .++|+|+|..+.. .+.. .+. .+.+... +..|+
T Consensus 6 ~p~~~~~---~~v~~G~~v~l~C~~~g~~p~p~~~v~W~k~~~~l~~----~~~~--~~~-----~~~~~~~~~~~~~d~ 71 (265)
T 2oz4_A 6 PPQLVSP---RVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP----TVTY--GND-----SFSAKASVSVTAEDE 71 (265)
T ss_dssp CCEEECC---SEEETTEEEEEEEEEESCSCGGGCEEEEEETTEECCC----EEEE--CSS-----EEEEEEEEEECGGGC
T ss_pred CCccccC---ceEecCCCEEEEEEccCCCCCcceEEEEEeCCEECCc----eEee--CCC-----eEEEEeecccccccC
Confidence 4555432 36889999999999988 6766 9999999998754 1111 111 3444444 77888
Q ss_pred eE--EEEEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcc
Q psy7036 82 GL--YKVKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRH 159 (254)
Q Consensus 82 G~--Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~ 159 (254)
|. |+|.+.|..+.....+.|.|... .+|.+.. ....+.+|+.+.|.|.+. |.+.+.| +|..+....
T Consensus 72 g~g~Y~C~a~n~~~~~~~~~~l~V~~~----p~p~~~~--~~~~v~~G~~v~l~C~~~--p~~~i~W--~g~~~~~~~-- 139 (265)
T 2oz4_A 72 GTQRLTCAVILGNQSQETLQTVTIYSF----PAPNVIL--TKPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQPLG-- 139 (265)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEECC----CCCEEEE--SCSEEETTCEEEEEEECC--TTSEEEE--SSCSSSCCS--
T ss_pred CcceEEEEEecCCCCcEEEEEEEEeCC----CCceeec--CCceecCCCcEEEEEEcc--CCCEEEE--CCEEccCCC--
Confidence 85 99999999888888888888631 1233332 334567899999999987 8889999 776652211
Q ss_pred eEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCC-Ccce---EEEEEEEecCCCCCCCCCCCCeeec--CCccccccC
Q psy7036 160 KFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNEL-GESN---ATISLNFDSDDAPVPGEGTKPVFTE--RPVTKQSDD 233 (254)
Q Consensus 160 ~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~-~~~~---~~~~~~v~~~~~~~~~~~~~p~~~~--~~~~~~~~~ 233 (254)
..+.|.|.....+|.|.|+|.|.|.. |... ..+.|.|.. +|.+.. .|....+.+
T Consensus 140 ----------~~~~l~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~----------~p~~~~~~~p~~~~v~~ 199 (265)
T 2oz4_A 140 ----------PRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLY----------GPRLDERDCPGNWTWPE 199 (265)
T ss_dssp ----------SEECCEEECCGGGTTEEEEEEEEEECSSSEEEEEEEEEEEEEE----------EEECCGGGSCSEEEEET
T ss_pred ----------CcEEEEEccccccCCceEEEEEEcCCCCCcccccccEEEEEEe----------CCccccccCCCccEEcC
Confidence 11268889899999999999998654 6554 566677664 333332 244557788
Q ss_pred CCCcEEEEEEEeccCCCceeC
Q psy7036 234 DLNDIVIECRLVGEPEPTISW 254 (254)
Q Consensus 234 g~~~~~l~C~~~~~p~p~~~W 254 (254)
|+ .+.|.|.+.|+|.|.++|
T Consensus 200 g~-~~~l~C~~~g~P~p~i~W 219 (265)
T 2oz4_A 200 NS-QQTPMCQAWGNPLPELKC 219 (265)
T ss_dssp TC-EECCCCCCEEESCCEEEE
T ss_pred CC-eEEEEeECccCCCCeEEE
Confidence 99 999999999999999998
No 74
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.95 E-value=1.4e-27 Score=178.09 Aligned_cols=215 Identities=12% Similarity=0.093 Sum_probs=153.6
Q ss_pred CCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEE
Q psy7036 6 DFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYK 85 (254)
Q Consensus 6 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 85 (254)
..+|.|...+....+.+|++++|.|.+.+. ++|++++.. .... . .....+.|.|.+++..|+|.|+
T Consensus 2 ~~~P~i~~~~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~-----~~~~--~---~~~~~~~L~i~~~~~~d~G~Y~ 67 (292)
T 4dkd_C 2 GSIPVIEPSVPELVVKPGATVTLRCVGNGS----VEWDGPPSP-----HWTL--Y---SDGSSSILSTNNATFQNTGTYR 67 (292)
T ss_dssp --CCEEESCCSSCEECTTCCEEEEEECSSC----CCBCCCCCS-----SCEE--C---CBTTEEEEEESSCCGGGCSCEE
T ss_pred CCCceecCCCCeEEEcCCCcEEEEEcCCCc----eEEccCCCC-----ceEE--e---ccCceEEEEEcccccccCEEEE
Confidence 357899999989999999999999999763 999976532 1111 1 1112348999999999999999
Q ss_pred EEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCC--CeEEEEECC-EecccCCcceEE
Q psy7036 86 VKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPA--PTVIWSHSG-VQVKEDKRHKFS 162 (254)
Q Consensus 86 C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~--~~~~W~~~~-~~~~~~~~~~~~ 162 (254)
|.+.|..+.....+.|.|.. .+..+...+....+.+|+.+.|.|.+.+ +. +.+.|++++ ..+.... ...
T Consensus 68 C~~~n~~~~~~~~~~l~V~~-----~~~~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~~~~~~~--~~~ 139 (292)
T 4dkd_C 68 CTEPGDPLGGSAAIHLYVKD-----PARPWNVLAQEVVVFEDQDALLPCLLTD-PVLEAGVSLVRVRGRPLMRHT--NYS 139 (292)
T ss_dssp ECCCC----CCEEECCEECC-----SSCCEEESCSEEEEETTSCEECCEEESS-GGGGSSEEEEEGGGCCCCSSC--CEE
T ss_pred EEEccCCCCcceEEEEEEcC-----ccccccccCCeEEEcCCCcEEEeeeCCC-CCcceeEEEEecCCCccccCC--ccc
Confidence 99998887777777888763 2222344455677889999999999987 44 689999974 4443222 222
Q ss_pred EcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcc-eEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEE
Q psy7036 163 IDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGES-NATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIE 241 (254)
Q Consensus 163 ~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~ 241 (254)
...++ .|.|.+++.+|.|.|+|.+.|..+.. ...+.|.|.... ..+|.+...+....+.+|+ .+.|.
T Consensus 140 ~~~~~-----~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~~------~~~p~i~~~~~~~~~~~g~-~v~l~ 207 (292)
T 4dkd_C 140 FSPWH-----GFTIHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQKVI------PGPPALTLVPAELVRIRGE-AAQIV 207 (292)
T ss_dssp CCSSS-----CCEETTCCGGGCSEEEEEECSTTSCEECCCEEEEEECCC------CSSCEEEEESSCBCCCSSS-CEEEE
T ss_pred ccCCc-----eEEECCCCHHHCeEEEEEEEeCCCceeEEEEEEEEeCCC------CCCCeEEccCCceeEecCC-CEEEE
Confidence 33332 59999999999999999999887754 346777776421 1267777777777777899 99999
Q ss_pred EEEeccCCC-ceeC
Q psy7036 242 CRLVGEPEP-TISW 254 (254)
Q Consensus 242 C~~~~~p~p-~~~W 254 (254)
|.+.+.|.+ .+.|
T Consensus 208 C~~~~~~~~~~~~w 221 (292)
T 4dkd_C 208 CSASSVDVNFDVFL 221 (292)
T ss_dssp EEEEESSSCCEEEC
T ss_pred EEecCCCCceEEEE
Confidence 999987754 5776
No 75
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.95 E-value=3.2e-26 Score=186.31 Aligned_cols=227 Identities=15% Similarity=0.243 Sum_probs=159.1
Q ss_pred CCCCCCCeeEeCCCceeecCCCeEEEEEEEeeC-CCCceEEEeCCEEee----eC-------CcceEEEeecCCcceEEE
Q psy7036 3 IAEDFAPSFTQKPQLRQEDEGNRLIFECQLLCN-PKPDIVWFRGETQLS----ED-------TRTVMKTTPIGTNKYLVA 70 (254)
Q Consensus 3 ~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~-~~~~v~W~~~~~~~~----~~-------~~~~~~~~~~~~~~~~~~ 70 (254)
+.+..+|.|...+....+.+|++++|.|.+.+. +.+.+.|+|++.... .. ...+......+.....+.
T Consensus 107 l~V~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 186 (585)
T 2ocw_A 107 LEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFS 186 (585)
T ss_pred EEEecCccccCCCccEEEEcCCCEEEEEEecCCCCCccEEEEECCCCCceEEecCCcccCccccCcEEEEeccCCCcEEE
Confidence 344567888888888899999999999999864 467899999875321 10 012223333333344558
Q ss_pred EEEeccCCCCCeEEEEEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCC---CeEEEE
Q psy7036 71 LELDDVIETDAGLYKVKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPA---PTVIWS 147 (254)
Q Consensus 71 l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~---~~~~W~ 147 (254)
|.|.+++..|+|.|+|.+.|..+.....+.|.|.. .+ +..+.+.+|+.+.|.|.+ +.+. +.+.|+
T Consensus 187 L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~-----~~------p~~~~~~~G~~v~l~C~~-~~~~~~~~~~~w~ 254 (585)
T 2ocw_A 187 VVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLK-----PE------PELVYEDLRGSVTFHCAL-GPEVANVAKFLCR 254 (585)
T ss_pred EEEccCChhHCeEEEEEeccCCccccceEEEEEcc-----CC------CceeEEcCCCcEEEEEEc-CCCCCCceEEEEE
Confidence 99999999999999999999988887888888863 12 233456789999999997 4443 578886
Q ss_pred -ECCEe---cccC-------CcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcce----EEEEEEEecCCCC
Q psy7036 148 -HSGVQ---VKED-------KRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESN----ATISLNFDSDDAP 212 (254)
Q Consensus 148 -~~~~~---~~~~-------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~----~~~~~~v~~~~~~ 212 (254)
+++.. +... ...++............|.|.+++.+|.|.|+|.|.|..+... ..+.|.|..
T Consensus 255 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~i~~v~~~d~G~Y~C~a~n~g~~~~~~~~~~~~l~V~~---- 330 (585)
T 2ocw_A 255 QSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCGAHSDGQLQEGSPIQAWQLFVNE---- 330 (585)
T ss_pred eCCCCCcceEEeCCCcCCcccCCceEeeccCCCcEEEEEEccCChhhCEEEEEEEEcCCCccccCceeeEEEEEec----
Confidence 77732 1110 1112222211111122699999999999999999999533321 667777764
Q ss_pred CCCCCCCCeeecCCccccccCCCCcEEEEEEEeccCCCce
Q psy7036 213 VPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEPEPTI 252 (254)
Q Consensus 213 ~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p~p~~ 252 (254)
+|.+...+....+.+|+ .+.|.|.+.+.|.|.+
T Consensus 331 ------~p~~~~~~~~~~~~~G~-~v~l~C~~~~~p~p~i 363 (585)
T 2ocw_A 331 ------ESTIPRSPTVVKGVAGS-SVAVLCPYNRKESKSI 363 (585)
T ss_pred ------ccccccCCcceEEEeCC-cEEEEEecCCCCCccE
Confidence 45555567777788999 9999999999999876
No 76
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.95 E-value=3.1e-27 Score=178.73 Aligned_cols=239 Identities=14% Similarity=0.146 Sum_probs=145.0
Q ss_pred CCCCeeEeCCCceeecCC--CeEEEEEEEeeC-C-CCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCC
Q psy7036 6 DFAPSFTQKPQLRQEDEG--NRLIFECQLLCN-P-KPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDA 81 (254)
Q Consensus 6 ~~~p~~~~~~~~~~v~~g--~~v~l~C~~~~~-~-~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 81 (254)
..+|.+...+.......| ++++|.|.+.+. | .+.|+|+|+|..+............++.....+.|.|.+....|+
T Consensus 5 ~~~P~v~~~~~~~~~~~~~~~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~ 84 (323)
T 2wqr_A 5 FTPPTVKILQSSCDGGGHFPPTIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSD 84 (323)
T ss_dssp CCCCCCEEEEECCCTTSCCCSEEEEEEEEEEECCCCEEEEEEETTEECCGGGEEEEEEEETTEEEEEEEEEEEHHHHHTT
T ss_pred CCCCEEEEeCCChHHhccCCCcEEEEEEEeCeECCCeEEEEEECCEEcccceecCCcCccCCcEEEEEEEEEcHHHcCCC
Confidence 456776655433333344 699999999885 4 478999999998865432211111122223345788988888899
Q ss_pred eEEEEEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeC-CCC---eEEEEECC-EecccC
Q psy7036 82 GLYKVKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQAD-PAP---TVIWSHSG-VQVKED 156 (254)
Q Consensus 82 G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~---~~~W~~~~-~~~~~~ 156 (254)
|.|+|.+.|..+.....+.+.+.. ....++.+...+....+..|+.+.|.|.+.+. |.+ .+.|++++ ..+...
T Consensus 85 g~Y~C~a~n~~~~~~~~~~~~~~~--~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~ 162 (323)
T 2wqr_A 85 RTYTCQVTYQGHTFEDSTKKCADS--NPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHS 162 (323)
T ss_dssp CCEEEEEEETTEEEEEEECCCCCS--SGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCC
T ss_pred CcEEEEEEeCCCCcceeeecCCCC--CCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccc
Confidence 999999998776543332211100 00012122333344456789999999998885 455 89999975 433221
Q ss_pred CcceEEEcCCCC-ceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCC
Q psy7036 157 KRHKFSIDKDGH-SYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDL 235 (254)
Q Consensus 157 ~~~~~~~~~~~~-~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~ 235 (254)
.. ......++. ...+.|.|.+++.+|.|.|+|.|.|..+.....+.+.+.. ....+|.+...+.......|+
T Consensus 163 ~~-~~~~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~~~~~~~~v~~~~------~~~~~P~v~~~~~~~~~~~g~ 235 (323)
T 2wqr_A 163 TR-KEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLPRALMRSTTKTS------GPRAAPEVYAFATPEWPGSRD 235 (323)
T ss_dssp CC-EEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSCEEEEECCCC------SCCBCCEEEEEECCCCTTCTT
T ss_pred cC-CCccCCCCCEEEEEEEEECHHHccCCCCEEEEEECCCCCCCeeeEEEccC------CCCCCCEEEEeCCChHHhcCC
Confidence 11 111111221 2345799999999999999999999875443343332210 011255554433332334488
Q ss_pred CcEEEEEEEecc-CCC-ceeC
Q psy7036 236 NDIVIECRLVGE-PEP-TISW 254 (254)
Q Consensus 236 ~~~~l~C~~~~~-p~p-~~~W 254 (254)
.+.|.|.+.|. |.+ .++|
T Consensus 236 -~~~l~C~~~g~~p~~~~v~W 255 (323)
T 2wqr_A 236 -KRTLACLIQNFMPEDISVQW 255 (323)
T ss_dssp -EEEEEEEEEEEBSSCCEEEE
T ss_pred -cEEEEEEeeeeeCCCcEEEE
Confidence 99999999985 443 6888
No 77
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.95 E-value=6e-27 Score=165.44 Aligned_cols=166 Identities=17% Similarity=0.266 Sum_probs=127.2
Q ss_pred CCCeeEeCCCceeecCCCeEEEEEEEeeCCCCc-eEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEE
Q psy7036 7 FAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPD-IVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYK 85 (254)
Q Consensus 7 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~-v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 85 (254)
..|.+...|....+.+|++++|.|.+.+.+.+. +.|+|+|..+.... ..|.|.+++.+|+|.|+
T Consensus 6 p~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~~~---------------~~L~i~~v~~~D~G~Y~ 70 (204)
T 3sgj_C 6 PKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQA---------------SSYFIDAATVDDSGEYR 70 (204)
T ss_dssp CBCEEEEESCCSEEETTCCEEEEEECCSSSSCCCEEEEETTEEESCCS---------------SEEEESSCCGGGCEEEE
T ss_pred CCCeEEEcCCCeEEECCCCEEEEEcCCCCCCCcEEEEEECCEEcccCc---------------cEEEEecccccCCEEEE
Confidence 467788888878899999999999998877665 99999999876543 17999999999999999
Q ss_pred EEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeC-CCCeEEEEECCEecccCCcceEEEc
Q psy7036 86 VKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQAD-PAPTVIWSHSGVQVKEDKRHKFSID 164 (254)
Q Consensus 86 C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~~~~W~~~~~~~~~~~~~~~~~~ 164 (254)
|.+.|... ...+.|.|.. ++.+...+. ..+.+|+.+.|.|.+.+. |.+.+.|++++..+....
T Consensus 71 C~a~n~~~--s~~~~l~V~~------~p~~~~~~~-~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~~------- 134 (204)
T 3sgj_C 71 CQTQLSTL--SDPVQLEVHI------GWLLLQAPR-WVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKYFH------- 134 (204)
T ss_dssp EEETTSBC--CCCEEEEEEC------SSEEEECSC-SEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEEEEE-------
T ss_pred EEeCCCcc--cccEEEEEec------CceEecCCc-eeEeCCCcEEEEEEecCCCCCceEEEEECCcEeeccc-------
Confidence 99987543 3455666652 233333332 567789999999999665 557899999998753211
Q ss_pred CCCCceeeEEEEccCCCCCceeEEEEEEcCC-CcceEEEEEEEec
Q psy7036 165 KDGHSYFASLEIIDVTIEDAGKYKVTAKNEL-GESNATISLNFDS 208 (254)
Q Consensus 165 ~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~-~~~~~~~~~~v~~ 208 (254)
.+ ..|.|.+++.+|+|.|+|.|.|.. +..+..+.|.|..
T Consensus 135 ~~-----~~L~i~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l~V~~ 174 (204)
T 3sgj_C 135 HN-----SDFYIPKATLKDSGSYFCRGLVGSKNVSSETVQITITQ 174 (204)
T ss_dssp EC-----CCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred CC-----ceEEECcCCcccCEEEEEEEEeCCCceecCcEEEEEeC
Confidence 11 279999999999999999999954 4456677777775
No 78
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.95 E-value=2.2e-27 Score=182.32 Aligned_cols=186 Identities=15% Similarity=0.164 Sum_probs=141.4
Q ss_pred eeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEEEEEcCCCceEE
Q psy7036 18 RQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKVKAKNKMGEVAA 97 (254)
Q Consensus 18 ~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~ 97 (254)
..+.+|++++|.|.+.+.|.+.++|++++..+... . ..|.|.+++..|+|.|+|.+.+..+....
T Consensus 106 ~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~---------~------~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~ 170 (363)
T 1wio_A 106 THLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQG---------G------KTLSVSQLELQDSGTWTCTVLQNQKKVEF 170 (363)
T ss_dssp SSEESBSCEEEEEECCTTCCCCEEEECSSSCEEEE---------S------SEEEECSBCGGGCEECEEEEEETTEEEEE
T ss_pred eEEecCCCEEEEEEcCCCCCCeEEEEcCCCccccc---------c------eEEEEeeCChhcCCEEEEEEecCCCeEEE
Confidence 36789999999999988899999999987543211 1 17999999999999999999987666666
Q ss_pred EEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEee-----CCCCeEEEEECCEeccc--------CCcceEEEc
Q psy7036 98 SINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQA-----DPAPTVIWSHSGVQVKE--------DKRHKFSID 164 (254)
Q Consensus 98 ~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-----~~~~~~~W~~~~~~~~~--------~~~~~~~~~ 164 (254)
.+.|.|.. +|.. +....+.+|+.+.|.|.+.+ .|.+.+.|++++..+.. .....+...
T Consensus 171 ~~~l~v~~------~p~~---~~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~ 241 (363)
T 1wio_A 171 KIDIVVLA------FQKA---SSIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRV 241 (363)
T ss_dssp CCEECEEC------CSCS---EEEEEEETBCCEEEECCCCCCCCSSCEEEEEEEEESSCCCCCCEEEEEECSSCEEEEEE
T ss_pred EEEEEEec------CCCC---CCceEEecCCEEEEEEEEecccccCCCceeEEEecCCCCccceEEEEEecCCeeecccc
Confidence 66666652 2221 14556778999999998877 77889999999987654 222111110
Q ss_pred ---------CCCCceeeEEEEccCCCCCceeEEEEEEcC--CCcceEEEEEEEecCCCCCCCCCCCCeeecCCccccccC
Q psy7036 165 ---------KDGHSYFASLEIIDVTIEDAGKYKVTAKNE--LGESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDD 233 (254)
Q Consensus 165 ---------~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~ 233 (254)
.++ ...|.|.++..+|+|.|+|.|.|. .|.....+.|.|.. + .
T Consensus 242 ~~~~~~~~~~~~---~~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~~~~l~V~~-------------v----------~ 295 (363)
T 1wio_A 242 TQDPKLQMGKKL---PLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMR-------------A----------T 295 (363)
T ss_dssp ECSSCCBCCSSS---SCEEEESSBCGGGCEEEEEEECBTTTTCCEEEEEEEEEEE-------------E----------C
T ss_pred ccchhhhcccCC---ceEEEEccCCcCcCcEEEEEEEEhhhcCeEEEEEeEEEEE-------------e----------c
Confidence 111 127999999999999999999999 88877777777752 1 1
Q ss_pred CCCcEEEEEEEeccCCCc--eeC
Q psy7036 234 DLNDIVIECRLVGEPEPT--ISW 254 (254)
Q Consensus 234 g~~~~~l~C~~~~~p~p~--~~W 254 (254)
|+ .+.|.|.+.|.|.|. ++|
T Consensus 296 g~-~~~l~C~~~g~p~p~~~i~W 317 (363)
T 1wio_A 296 QL-QKNLTCEVWGPTSPKLMLSL 317 (363)
T ss_dssp CC-SSSEEEEEESSCCTTCCEEE
T ss_pred CC-CeeEEEEEccccCCCccEEE
Confidence 66 899999999999988 888
No 79
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.95 E-value=2.2e-26 Score=184.16 Aligned_cols=207 Identities=14% Similarity=0.168 Sum_probs=137.4
Q ss_pred CCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEEEEEcCCC
Q psy7036 14 KPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKVKAKNKMG 93 (254)
Q Consensus 14 ~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~ 93 (254)
.+..+.|.+|++++|.|.+.+.+...+.|++++..+.....+.. .+....+|.|.+++.+|+|.|+|.+.|..+
T Consensus 54 ~~~~~~v~~g~~~~L~c~~~~~~~~~~~W~~~~~~l~~~~~~~~------~~r~~~SL~I~~v~~~D~G~Y~C~~~n~~~ 127 (527)
T 3qs9_E 54 EAAAVEVDVSASITLQVLVDAPGNISCLWVFKHSSLNCQPHFDL------QNRGVVSMVILKMTETQAGEYLLFIQSEAT 127 (527)
T ss_dssp --CEEEECSSCCEEEEEECSCCSSCEEEEEETTEEECCCCBC-----------CEEEEEESSCCSSSCSEEEEEEEC--C
T ss_pred eeeeEEEeccccEEEEEEEecCCceeEEEEecCCccCcccccCC------CcceEEEEEECcCChhhCeeEEEEEEeccc
Confidence 33478899999999999998888889999999987754433321 112334799999999999999999999887
Q ss_pred ceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeE
Q psy7036 94 EVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFAS 173 (254)
Q Consensus 94 ~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (254)
.....+.|.|.. ..............+..+.|.|.+.|.|.|.+.|++++..+..... ..... ..
T Consensus 128 ~~~~~~~v~v~~-------~~~~~~~~p~~~~~~~~~~L~C~a~G~P~P~i~W~~~~~~~~~~~~-----~~~~~---~~ 192 (527)
T 3qs9_E 128 NYTILFTVSIRN-------TLLYTLRRPYFRKMENQDALVCISESVPEPIVEWVLCDSQGESCKE-----ESPAV---VK 192 (527)
T ss_dssp EEEEEEEEEEC------------CEEEEEEEECSSSSCEEEEEEESSCCEEEEEEC------------------C---EE
T ss_pred cEEEEEEEEECC-------ceeeccCCCcEEecCCceEEEEEEceecCCeEEEEECCCCCccccc-----cCCcE---EE
Confidence 766666666641 1111111112234567778999999999999999998765431110 00000 01
Q ss_pred EEEccCCCCCceeEEEEEEcCCCcceEE-EEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEe-ccCCCc
Q psy7036 174 LEIIDVTIEDAGKYKVTAKNELGESNAT-ISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLV-GEPEPT 251 (254)
Q Consensus 174 l~i~~~~~~d~G~y~C~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~-~~p~p~ 251 (254)
.....+..+|+|.|+|.|.|..|..... +.|.|.. .|.+ .+....+.+|+ .+.|.|.+. |.|.|.
T Consensus 193 ~~~~~~~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~----------~p~~--~p~~~~v~~G~-~v~L~C~~~~g~p~p~ 259 (527)
T 3qs9_E 193 KEEKVLHELFGTDIRCCARNELGRECTRLFTIDLNQ----------TPQT--TLPQLFLKVGE-PLWIRCKAVHVNHGFG 259 (527)
T ss_dssp ECCSEECCCCSSCEEEEEECSSCEEEEECEEEESSS----------CCCC--SCCEEEECTTS-CEEEEEEEEESSSCCC
T ss_pred EeeeeccccCCEEEEEEEEeCCCcccceEEEEEEec----------cCcc--CCCceEEeCCC-eEEEEEEEccCCCCeE
Confidence 2223345789999999999999876544 6666653 2222 34456778899 999999996 899999
Q ss_pred eeC
Q psy7036 252 ISW 254 (254)
Q Consensus 252 ~~W 254 (254)
++|
T Consensus 260 i~W 262 (527)
T 3qs9_E 260 LTW 262 (527)
T ss_dssp EEE
T ss_pred EEE
Confidence 999
No 80
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.95 E-value=1.5e-26 Score=180.14 Aligned_cols=171 Identities=26% Similarity=0.422 Sum_probs=139.0
Q ss_pred ceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEEEEEcCCCceE
Q psy7036 17 LRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKVKAKNKMGEVA 96 (254)
Q Consensus 17 ~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~ 96 (254)
...+.+|+++.|.|.+.+.|.+.++|++++..+..... .. .... ..|.|.+++..|+|.|+|.+.|..|...
T Consensus 231 ~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~-~~--~~~~-----~~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 302 (404)
T 3p3y_A 231 SQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKA-KF--ENFN-----KALRITNVSEEDSGEYFCLASNKMGSIR 302 (404)
T ss_dssp EEEEETTSCEEEECCBCCSSCCEEEEEETTBCCCTTTE-EE--EGGG-----TEEEESSCCGGGCEEEEEEEECSSCEEE
T ss_pred CceEecCCCEEEEEEECCCCCCcEEEEECCEECCCCcc-cc--cccC-----ceEEEccCCHhHCEEEEEEEEeCCCcEE
Confidence 45688999999999999999999999999988765433 11 1111 1799999999999999999999999888
Q ss_pred EEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcc-eEEEcCCCCceeeEEE
Q psy7036 97 ASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRH-KFSIDKDGHSYFASLE 175 (254)
Q Consensus 97 ~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~ 175 (254)
..+.|.|.. +|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+...... .... .++ .|.
T Consensus 303 ~~~~l~V~~------~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~-~~~-----~L~ 370 (404)
T 3p3y_A 303 HTISVRVKA------APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREV-AGD-----TII 370 (404)
T ss_dssp EEEEEEEEE------EEEEEECCCCEEECTTCCEEEECEEEEESCCEEEEEETTEEGGGSCCCTTEEE-ETT-----EEE
T ss_pred EEEEEEEeC------CCeeeccCCcceeecCCcEEEEEEccccCCCceEEEECCEecCCCCCCceEEe-cCC-----EEE
Confidence 888888873 455555556677889999999999999999999999999988755322 2222 222 799
Q ss_pred EccCCCCCceeEEEEEEcCCCcceEEEEEEEe
Q psy7036 176 IIDVTIEDAGKYKVTAKNELGESNATISLNFD 207 (254)
Q Consensus 176 i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~ 207 (254)
|.++..+|+|.|+|.|.|..|.....+.|.|.
T Consensus 371 i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 402 (404)
T 3p3y_A 371 FRDTQISSRAVYQCNTSNEHGYLLANAFVSVL 402 (404)
T ss_dssp ESSCCSSCCCEEEEEEEETTEEEEEEEEEEEC
T ss_pred EeecCHHHCEEEEEEEEeCCCcEEEEEEEEEE
Confidence 99999999999999999999999888888775
No 81
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.95 E-value=1.1e-26 Score=163.86 Aligned_cols=186 Identities=17% Similarity=0.240 Sum_probs=133.6
Q ss_pred CeeE-eCCCceeecCCCeEEEEEE-EeeCCC-CceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEE
Q psy7036 9 PSFT-QKPQLRQEDEGNRLIFECQ-LLCNPK-PDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYK 85 (254)
Q Consensus 9 p~~~-~~~~~~~v~~g~~v~l~C~-~~~~~~-~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 85 (254)
|.|. ..+....+.+|+++.|.|. +.+.|. +.+.|++++..+............... .|.|.+++..|+|.|+
T Consensus 8 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~~~~~~-----~L~i~~v~~~d~G~Y~ 82 (201)
T 3s97_C 8 DPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNG-----NLYIANVEASDKGNYS 82 (201)
T ss_dssp CCCCSSCCCCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEECTTTC-----CEEESSCCGGGCEEEE
T ss_pred CccCcCCCceEEEECCCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEEEcCCC-----eEEECcCCcccCeEEE
Confidence 4443 4557788999999999999 778888 999999998766432222222221111 6999999999999999
Q ss_pred EEEEcCCCceEE---EEEEEEeccc-cCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceE
Q psy7036 86 VKAKNKMGEVAA---SINLNFSREQ-IDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKF 161 (254)
Q Consensus 86 C~~~~~~~~~~~---~~~l~v~~~~-~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~ 161 (254)
|.+.+..+.... ...+.+.... ....+|.+........+..|+.+.|.|.+.+.|.+.+.|++++..+... ..+
T Consensus 83 C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~--~~~ 160 (201)
T 3s97_C 83 CFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPST--AEI 160 (201)
T ss_dssp EEEEEGGGTEEEECCCEEEEEECCSSCCCEEEEEEEECCCEEEETTCCEEEEEEEEEESCCEEEEEETTBCCCTT--CEE
T ss_pred EEEEecCCCcchhhcccceeeccccccCCCCCceEecCCceEEecCCcEEEEEEccCCCCCceEEEeCCCcCCCc--eee
Confidence 999987655332 2333332111 1112333333334567788999999999999999999999999876533 222
Q ss_pred EEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEe
Q psy7036 162 SIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFD 207 (254)
Q Consensus 162 ~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~ 207 (254)
. ..+. .|.|.++..+|.|.|+|.|.|..|....++.|.|.
T Consensus 161 ~-~~~~-----~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 200 (201)
T 3s97_C 161 S-TSGA-----VLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQ 200 (201)
T ss_dssp E-TTTT-----EEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred c-CCCC-----EEEEccCChhhCEEEEEEEEecCCceeeeEEEEEe
Confidence 2 2222 79999999999999999999999998888888775
No 82
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.95 E-value=5.7e-26 Score=184.87 Aligned_cols=218 Identities=16% Similarity=0.224 Sum_probs=152.1
Q ss_pred eCCCceeecCCCeEEEEEEEeeCCC---CceEEEeCCEEe-----eeC-------CcceEEEeecCCcceEEEEEEeccC
Q psy7036 13 QKPQLRQEDEGNRLIFECQLLCNPK---PDIVWFRGETQL-----SED-------TRTVMKTTPIGTNKYLVALELDDVI 77 (254)
Q Consensus 13 ~~~~~~~v~~g~~v~l~C~~~~~~~---~~v~W~~~~~~~-----~~~-------~~~~~~~~~~~~~~~~~~l~i~~~~ 77 (254)
..|..+.+.+|++++|.|.+.+.+. ..+.|+|++..+ ... ...++..... .......|.|.+++
T Consensus 5 ~~P~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~g~~~L~I~~v~ 83 (585)
T 2ocw_A 5 FGPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNF-PENGTFVVNIAQLS 83 (585)
T ss_pred cCcceeEEecCCcEEEEEeCCCCcCCCcccEEEEeCCCCCCceEEEECCCcccceeeceEEEEec-CCCCEEEEEECCCC
Confidence 4567788999999999999987654 379999987532 110 0111211110 12233479999999
Q ss_pred CCCCeEEEEEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCC-CCeEEEEECCEecc--
Q psy7036 78 ETDAGLYKVKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADP-APTVIWSHSGVQVK-- 154 (254)
Q Consensus 78 ~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~-~~~~~W~~~~~~~~-- 154 (254)
..|+|.|+|.+.+..+.....+.|.|. .+|.+...+....+.+|+.+.|.|.+.+.+ .+.+.|+|++....
T Consensus 84 ~~D~G~Y~C~~~n~~~~~~~~~~l~V~------~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~~~~~~ 157 (585)
T 2ocw_A 84 QDDSGRYKCGLGINSRGLSFDVSLEVS------QGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVL 157 (585)
T ss_pred cccCEEEEEEcccCCCCceEEEEEEEe------cCccccCCCccEEEEcCCCEEEEEEecCCCCCccEEEEECCCCCceE
Confidence 999999999999888877777888886 455555566677888999999999998654 56799999875421
Q ss_pred --cC-------CcceEEEcCCC-CceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEecCCCCCCCCCCCCeeec
Q psy7036 155 --ED-------KRHKFSIDKDG-HSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDSDDAPVPGEGTKPVFTE 224 (254)
Q Consensus 155 --~~-------~~~~~~~~~~~-~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~ 224 (254)
.. ...+.....++ ......|.|.+++.+|+|.|+|.+.|..+.....+.|.|... +
T Consensus 158 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~---------~----- 223 (585)
T 2ocw_A 158 VIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKP---------E----- 223 (585)
T ss_pred EecCCcccCccccCcEEEEeccCCCcEEEEEEccCChhHCeEEEEEeccCCccccceEEEEEccC---------C-----
Confidence 10 01112222111 122347999999999999999999999988888888887631 1
Q ss_pred CCccccccCCCCcEEEEEEEeccCC---CceeC
Q psy7036 225 RPVTKQSDDDLNDIVIECRLVGEPE---PTISW 254 (254)
Q Consensus 225 ~~~~~~~~~g~~~~~l~C~~~~~p~---p~~~W 254 (254)
|....+.+|+ .+.|.|.+ +.|. +.+.|
T Consensus 224 -p~~~~~~~G~-~v~l~C~~-~~~~~~~~~~~w 253 (585)
T 2ocw_A 224 -PELVYEDLRG-SVTFHCAL-GPEVANVAKFLC 253 (585)
T ss_pred -CceeEEcCCC-cEEEEEEc-CCCCCCceEEEE
Confidence 2233466788 99999997 4444 45666
No 83
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.95 E-value=4.8e-27 Score=167.28 Aligned_cols=184 Identities=16% Similarity=0.249 Sum_probs=128.5
Q ss_pred EeCCCceeecCCCeEEEEEEEeeCC----CCceEEEe----------------CCEEeee---CCcceEEEeecCCcceE
Q psy7036 12 TQKPQLRQEDEGNRLIFECQLLCNP----KPDIVWFR----------------GETQLSE---DTRTVMKTTPIGTNKYL 68 (254)
Q Consensus 12 ~~~~~~~~v~~g~~v~l~C~~~~~~----~~~v~W~~----------------~~~~~~~---~~~~~~~~~~~~~~~~~ 68 (254)
...+..+.+.+|++++|.|.+.+.+ .+.+.|++ ++..+.. ....+............
T Consensus 4 ~~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 83 (214)
T 3jz7_A 4 TTPEQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGD 83 (214)
T ss_dssp --CEEEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTB
T ss_pred ecCCceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCc
Confidence 3445667889999999999998765 46899998 3333321 11112222221111223
Q ss_pred EEEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEE-eeCCCCeEEEE
Q psy7036 69 VALELDDVIETDAGLYKVKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRI-QADPAPTVIWS 147 (254)
Q Consensus 69 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~-~~~~~~~~~W~ 147 (254)
.+|.|.+++..|+|.|+|.+.+..+.....+.|.|.. +|.+........+..|+.+.|.|.+ .+.|.+.+.|+
T Consensus 84 ~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~------~p~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~ 157 (214)
T 3jz7_A 84 ASINVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLV------KPSGTRCFVDGSEEIGNDFKLKCEPKEGSLPLQFEWQ 157 (214)
T ss_dssp CCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC------CCBSCEEEEESCCBTTCCEEEEEECSBCCSSCEEEEE
T ss_pred ccEEEccCChhhCeEEEEEEEeCCCccccEEEEEEEc------CCCCceeeeecceecCCcEEEEecCCCCCCCCEEEEE
Confidence 3799999999999999999999888878888888873 3333222223346789999999999 78999999999
Q ss_pred ECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEe
Q psy7036 148 HSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFD 207 (254)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~ 207 (254)
+++........... ...++ .|.|.+++.+|.|.|+|.|.|..|....++.|.|.
T Consensus 158 ~~~~~~~~~~~~~~-~~~~~-----~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 211 (214)
T 3jz7_A 158 KLSDSQTMPTPWLA-EMTSP-----VISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVV 211 (214)
T ss_dssp ECSTTCCCCGGGGG-GTTSS-----EEEECSCCGGGCEEEEEEEECSSCEEEEEEEECCB
T ss_pred ECCCCCccCcccee-ccCCC-----EEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEEEe
Confidence 95432221111111 11122 79999999999999999999999998888887775
No 84
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.95 E-value=7.3e-27 Score=178.30 Aligned_cols=186 Identities=18% Similarity=0.254 Sum_probs=143.2
Q ss_pred CCCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCe-E
Q psy7036 5 EDFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAG-L 83 (254)
Q Consensus 5 ~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G-~ 83 (254)
...+|.|...+....+.+|++++|.|.+.+.|.+.+.|++++..+...... ........|.|.+++..|+| .
T Consensus 155 ~c~~P~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~~-------~~~~~~~~L~i~~v~~~D~G~~ 227 (347)
T 2ifg_A 155 SCGVPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMK-------SGGLPSLGLTLANVTSDLNRKN 227 (347)
T ss_dssp TCCCCEEEEECCSSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEECC-------CCCSSEEEEEEESCCSTTTTCC
T ss_pred cCCCCceeccCCceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeeccccc-------ceecccceEEEeeCChHHCCCe
Confidence 446899999998889999999999999999999999999988654321111 11223348999999999999 9
Q ss_pred EEEEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEE
Q psy7036 84 YKVKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSI 163 (254)
Q Consensus 84 Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~ 163 (254)
|+|.+.|..|.....+.|.|. .+|.+ .......|+.+.|.|.+.|.|.|.+.|++++..+..........
T Consensus 228 Y~C~a~n~~g~~~~~~~l~V~------~~P~i----~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~ 297 (347)
T 2ifg_A 228 VTCWAENDVGRAEVSVQVNVS------FPASV----QLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEF 297 (347)
T ss_dssp EEECCEETTEECCEEECCCCB------EEEEE----EECCCEESSSEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEE
T ss_pred EEEEEEcCCCCEEEEEEEEEc------CCCee----eeccCccCceEEEEEEeeecCCCcEEEEeCCEECCCCcceeeEE
Confidence 999999998887777777765 23332 11223468999999999999999999999999887544433322
Q ss_pred cC---CCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEe
Q psy7036 164 DK---DGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFD 207 (254)
Q Consensus 164 ~~---~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~ 207 (254)
.. +.......|.|.+++.+|+|.|+|.|.|..|....++.+.|.
T Consensus 298 ~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 344 (347)
T 2ifg_A 298 LEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFM 344 (347)
T ss_dssp CCCCTTCCCEEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEECSC
T ss_pred EeecCCCcccceEEEECCCCcccCceEEEEEecCCCceeeEEEEEec
Confidence 22 122334579999999999999999999999988888877765
No 85
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.95 E-value=1.3e-25 Score=177.27 Aligned_cols=215 Identities=14% Similarity=0.218 Sum_probs=146.1
Q ss_pred CCCeeE-eCCCceeecCCCeEEEEEEEeeCCCC---ceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCe
Q psy7036 7 FAPSFT-QKPQLRQEDEGNRLIFECQLLCNPKP---DIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAG 82 (254)
Q Consensus 7 ~~p~~~-~~~~~~~v~~g~~v~l~C~~~~~~~~---~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G 82 (254)
.+|.+. ..+....+.+|++++|.|.+.+.+.+ .++|+|++..+...... .......|.|.+++.+|+|
T Consensus 84 ~~P~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~g~~l~~~~~~--------~~~~~~~L~i~~~~~~d~G 155 (450)
T 1z7z_I 84 WTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAV--------GEPAEVTTTVLVRRDHHGA 155 (450)
T ss_dssp BCCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEECC--------TTTEEEEEEEECCSSCSSC
T ss_pred eCCCcceecCCCceEeeCCeEEEEEEecCCCCCcCcEEEEeeCCEEeeccccc--------ccccceEEEEEeeccccCc
Confidence 355544 56677789999999999999988777 89999999988654311 1122348999999999999
Q ss_pred EEEEEEEcCCCceE--------EEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeC-C--CCeEEEEECCE
Q psy7036 83 LYKVKAKNKMGEVA--------ASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQAD-P--APTVIWSHSGV 151 (254)
Q Consensus 83 ~Y~C~~~~~~~~~~--------~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-~--~~~~~W~~~~~ 151 (254)
.|+|.+.|..|... ....+.|... ...+|.+.. ...+.+|+.+.|.|.+.+. | .+.+.|++++.
T Consensus 156 ~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~--~~~~p~~~~---~~~v~~G~~v~l~C~~~g~~P~~~~~~~W~~~~~ 230 (450)
T 1z7z_I 156 NFSCRTELDLRPQGLELFENTSAPYQLQTFVL--PATPPQLVS---PRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQ 230 (450)
T ss_dssp EEEEEEEEECGGGTSCEEEEECCCEECEECCC--CSSCCEEEC---CSEEETTSEEEEEEEEESCTTGGGCEEEEEETTE
T ss_pred eEEEEEEcccCCCCceEEeeccCccceeeecc--CCCCCEecC---ceeEEeCCcEEEEEEeeCCCCCCceEEEEeCCCE
Confidence 99999999876422 2233444321 012222211 1567789999999999988 6 68999999998
Q ss_pred ecccCCcceEEEcCCCCceeeEEEEccCCCCCce--eEEEEEEcCCCcceEEEEEEEecCCCCCCCCCCCCeeecCCccc
Q psy7036 152 QVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAG--KYKVTAKNELGESNATISLNFDSDDAPVPGEGTKPVFTERPVTK 229 (254)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G--~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~ 229 (254)
.+.. .+....+. ....+.+ +++.+|.| .|+|.+.|..+.......|.|...+ +|.+... ..
T Consensus 231 ~~~~----~~~~~~~~--~~~~~~~-~v~~~d~G~~~Y~C~a~n~~g~~~~~~~l~V~~~~--------~p~i~~~--~~ 293 (450)
T 1z7z_I 231 RLNP----TVTYGNDS--FSAKASV-SVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFP--------APNVILT--KP 293 (450)
T ss_dssp ECCC----EEEEETTE--EEEEEEE-ECCGGGCEEEEEEEEEEETTEEEEEEEEEEEECCC--------CCEEEES--CS
T ss_pred eCCc----eEEecCCc--eeEEEEE-EeEhhhCCcEEEEEEEccCCccEEEEEEEEEecCC--------CCeEecC--Ce
Confidence 8754 12222221 1112223 67899999 9999999999888888888887522 3555433 34
Q ss_pred cccCCCCcEEEEEEEeccCCCceeC
Q psy7036 230 QSDDDLNDIVIECRLVGEPEPTISW 254 (254)
Q Consensus 230 ~~~~g~~~~~l~C~~~~~p~p~~~W 254 (254)
.+.+|+ .+.|.|.+. |.|.++|
T Consensus 294 ~v~~G~-~v~l~C~~~--p~p~i~W 315 (450)
T 1z7z_I 294 EVSEGT-EVTVKCEAH--PRAKVTL 315 (450)
T ss_dssp EEETTC-EEEEEEEC----------
T ss_pred eEeCCC-cEEEEEecC--CCCEeEE
Confidence 678899 999999997 8889998
No 86
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.95 E-value=3.2e-26 Score=171.73 Aligned_cols=182 Identities=26% Similarity=0.426 Sum_probs=136.5
Q ss_pred CCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCc-ceEEEeecCCcceEEEEEEeccCCCCCeEEEE
Q psy7036 8 APSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTR-TVMKTTPIGTNKYLVALELDDVIETDAGLYKV 86 (254)
Q Consensus 8 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 86 (254)
.|.+...+....+.+|+++.|.|.+.+.|.+.+.|++++..+..... .++.....+ .|.|.+++..|+|.|+|
T Consensus 108 ~p~i~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~------~L~i~~~~~~d~G~Y~C 181 (304)
T 2yd9_A 108 FPNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQLRSG------ALQIESSEETDQGKYEC 181 (304)
T ss_dssp CCEEEECCCCEEEETTSCEEECCEEECSSCCEEEEEETTEECCGGGGTTSEEECTTS------CEEECSCCGGGCEEEEE
T ss_pred CCeeecCCccEEEeCCCeEEEEEECccCCCCeEEEEECCEECcCCCCcceEEeCCCe------EEEEccCCcccCEEEEE
Confidence 37888888888899999999999999999999999999998865422 223222222 69999999999999999
Q ss_pred EEEcCCCceEEE-EEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcC
Q psy7036 87 KAKNKMGEVAAS-INLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDK 165 (254)
Q Consensus 87 ~~~~~~~~~~~~-~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~ 165 (254)
.+.|..|..... ..+.|... ..+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+.......
T Consensus 182 ~a~n~~g~~~~~~~~l~v~~~---~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~----- 253 (304)
T 2yd9_A 182 VATNSAGVRYSSPANLYVRVQ---NVAPRFSILPMSHEIMPGGNVNITCVAVGSPMPYVKWMQGAEDLTPEDDMP----- 253 (304)
T ss_dssp EEEETTEEEECCCEEEEEECC---CEEEEEEECCCCBCCCTTCCEEEEEEEEEESCCEEEEEETTEECSCSSSCC-----
T ss_pred EEEeCCCCEEeccEEEEEEee---ccCCcEEecCCceEEcCCCeEEEEEEEeeeCCCEEEEEECCEECCCccccc-----
Confidence 999988865432 44444311 134555555555678889999999999999999999999998886543211
Q ss_pred CCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEec
Q psy7036 166 DGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDS 208 (254)
Q Consensus 166 ~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~ 208 (254)
.+ ...|.|.++ +|+|.|+|.|.|..|....++.|.|..
T Consensus 254 ~~---~~~L~i~~~--~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 291 (304)
T 2yd9_A 254 VG---RNVLELTDV--KDSANYTCVAMSSLGVIEAVAQITVKS 291 (304)
T ss_dssp BS---EEEEEECSC--CSCEEEEEEEEETTEEEEEEEEEC---
T ss_pred CC---cEEEEEccc--ccCEEEEEEEEeCCCcEEEEEEEEEec
Confidence 11 125666665 689999999999999998888888874
No 87
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.95 E-value=1.7e-26 Score=182.34 Aligned_cols=204 Identities=18% Similarity=0.237 Sum_probs=148.3
Q ss_pred eEeCCCceeecCCCeEEEEEEEeeCCCCce-----EEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEE
Q psy7036 11 FTQKPQLRQEDEGNRLIFECQLLCNPKPDI-----VWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYK 85 (254)
Q Consensus 11 ~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v-----~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 85 (254)
|...|....+.+|++++|.|.+.+ |.+.+ .|+|++..+... + ...|.|.+++. |+| |+
T Consensus 2 i~~~P~~~~v~~G~~v~L~C~~~g-p~p~~~~~~~~w~k~~~~~~~~-~-------------~~~l~i~~v~~-d~g-Y~ 64 (450)
T 1z7z_I 2 TSVSPSKVILPRGGSVLVTCSTSC-DQPMLLGIETPLPKKELLLPGN-N-------------RKVYELSNVQE-DSQ-PM 64 (450)
T ss_dssp CEEESSEEEEETTEEEEEEEECCS-SCCCEEEECSSSCEEECCSSTT-T-------------EEEEEEEEECS-CBC-CE
T ss_pred cccCCCceEEecCCcEEEEEEccC-CCcccccccceeeecceEecCC-C-------------ceEEEEEeccc-CCe-eE
Confidence 566788889999999999999998 88888 899876543211 1 11689999987 999 99
Q ss_pred EEEEcCCCceEEEEEEEEeccccCCCCCccc-cCCCeeeecCCCeEEEEEEEeeCCCC---eEEEEECCEecccCCcceE
Q psy7036 86 VKAKNKMGEVAASINLNFSREQIDGLAPTFL-KKPSIRQEDDGKRLLFECRIQADPAP---TVIWSHSGVQVKEDKRHKF 161 (254)
Q Consensus 86 C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~-~~~~~~~~~~g~~~~l~C~~~~~~~~---~~~W~~~~~~~~~~~~~~~ 161 (254)
|.+.+..+.....+.|.|.. +|... ..+....+.+|+.+.|.|.+.+.+++ .+.|+|++..+......
T Consensus 65 C~a~~~~~~~~~~~~l~V~~------~P~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~g~~l~~~~~~-- 136 (450)
T 1z7z_I 65 CYSNCPDGQSTAKTFLTVYW------TPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAV-- 136 (450)
T ss_dssp EEEEETTEEEEEECEEEEEB------CCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEECC--
T ss_pred EEEeCCCCcceeEEEEEEEe------CCCcceecCCCceEeeCCeEEEEEEecCCCCCcCcEEEEeeCCEEeeccccc--
Confidence 99987666666677787763 33333 44455678899999999999998887 89999999887533210
Q ss_pred EEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcce--------EEEEEEEecCCCCCCCCCCCCeeecCCccccccC
Q psy7036 162 SIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESN--------ATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDD 233 (254)
Q Consensus 162 ~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~--------~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~ 233 (254)
.......|.|.+++.+|.|.|+|.|.|..|... ....+.+... ...+|.+... ..+.+
T Consensus 137 -----~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~------~~~~p~~~~~---~~v~~ 202 (450)
T 1z7z_I 137 -----GEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVL------PATPPQLVSP---RVLEV 202 (450)
T ss_dssp -----TTTEEEEEEEECCSSCSSCEEEEEEEEECGGGTSCEEEEECCCEECEECCC------CSSCCEEECC---SEEET
T ss_pred -----ccccceEEEEEeeccccCceEEEEEEcccCCCCceEEeeccCccceeeecc------CCCCCEecCc---eeEEe
Confidence 011123799999999999999999999877543 2233333321 0123444322 56778
Q ss_pred CCCcEEEEEEEecc-C--CCceeC
Q psy7036 234 DLNDIVIECRLVGE-P--EPTISW 254 (254)
Q Consensus 234 g~~~~~l~C~~~~~-p--~p~~~W 254 (254)
|+ .+.|.|.+.|. | .+.++|
T Consensus 203 G~-~v~l~C~~~g~~P~~~~~~~W 225 (450)
T 1z7z_I 203 DT-QGTVVCSLDGLFPVSEAQVHL 225 (450)
T ss_dssp TS-EEEEEEEEESCTTGGGCEEEE
T ss_pred CC-cEEEEEEeeCCCCCCceEEEE
Confidence 99 99999999998 7 577887
No 88
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.95 E-value=5.5e-26 Score=163.29 Aligned_cols=183 Identities=15% Similarity=0.153 Sum_probs=121.3
Q ss_pred CCceeecCCCeEEEEEEEeeCCCC---ceEEEeCCEE-----------eee----CCcceEEEeecCCcceEEEEEEecc
Q psy7036 15 PQLRQEDEGNRLIFECQLLCNPKP---DIVWFRGETQ-----------LSE----DTRTVMKTTPIGTNKYLVALELDDV 76 (254)
Q Consensus 15 ~~~~~v~~g~~v~l~C~~~~~~~~---~v~W~~~~~~-----------~~~----~~~~~~~~~~~~~~~~~~~l~i~~~ 76 (254)
++++.+.+|++|+|.|.+.+.+.+ .|+|+|++.. +.. ....+............++|.|.++
T Consensus 11 ~~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v 90 (226)
T 4f80_A 11 SGPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNV 90 (226)
T ss_dssp SSCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSC
T ss_pred CCCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeC
Confidence 345788999999999999765543 6999987632 111 1112222223333344568999999
Q ss_pred CCCCCeEEEEEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEee-CCCCeEEEEECCEeccc
Q psy7036 77 IETDAGLYKVKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQA-DPAPTVIWSHSGVQVKE 155 (254)
Q Consensus 77 ~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~~~~W~~~~~~~~~ 155 (254)
+..|+|.|+|.+.|..+.....+.+.+.. ..........+..|..+.+.|.+.+ .|.|.+.|++++..+..
T Consensus 91 ~~~D~G~Y~C~a~n~~~~~~~~v~~~~~~--------~~~~~~~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~ 162 (226)
T 4f80_A 91 TASDSGKYLCYFQDGDFYEKALVELKVAA--------LGSDLHVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIP 162 (226)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEEEEEEB--------CCCCCEEEEEEEETTEEEEEEEEEEEBSCCEEEEECTTSCBCC
T ss_pred chHHCeeEEEEEECCCcEEEEEEEEeecc--------ceecccceeeeccCCceeeEEEeccCCCCCEEEEEECCceEcC
Confidence 99999999999999887766666555532 1112223455678999999999887 58999999997654433
Q ss_pred CCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEe
Q psy7036 156 DKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFD 207 (254)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~ 207 (254)
..........++. ...+.+..++.+|.|.|+|.|.|..|...++..|.|.
T Consensus 163 ~~~~~~~~~~~g~--~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~~v~v~ 212 (226)
T 4f80_A 163 TVEAPVVADGVGL--YAVAASVIMRGSSGEGVSCTIRSSLLGLEKTASISIA 212 (226)
T ss_dssp CEECCCEECTTSC--EEEEEEEEECC----CEEEEEEETTTTEEEEEEECCC
T ss_pred CCceEEEECCCCc--EEEEEEEEechhcCcEEEEEEEeCCCCeEEEEEEEEC
Confidence 3333333333332 1234455677899999999999999999888887775
No 89
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.95 E-value=4.3e-26 Score=157.39 Aligned_cols=165 Identities=17% Similarity=0.260 Sum_probs=125.9
Q ss_pred CCCeeEeCCCceeecCCCeEEEEEEEeeCCCCc-eEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEE
Q psy7036 7 FAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPD-IVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYK 85 (254)
Q Consensus 7 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~-v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 85 (254)
.+|.+...|....+.+|++++|.|.+.+.+.+. +.|+|++..+..... .|.|.+++.+|+|.|+
T Consensus 6 ~~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~~~~~---------------~L~i~~~~~~d~G~Y~ 70 (175)
T 1fnl_A 6 PKAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQAS---------------SYFIDAATVNDSGEYR 70 (175)
T ss_dssp CCCEEEEESCCSEEETTCCEEEEEECCCBTTBCCCEEEETTEEEESSCS---------------EEEESSCCGGGCEEEE
T ss_pred CCCEEEEcCCceeeeCCCcEEEEeeCCCCCCCcceEEEECCEEccCCce---------------EEEEeCCCcccCEEEE
Confidence 478888888888899999999999998877665 899999988764211 7999999999999999
Q ss_pred EEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCC-eEEEEECCEecccCCcceEEEc
Q psy7036 86 VKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAP-TVIWSHSGVQVKEDKRHKFSID 164 (254)
Q Consensus 86 C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~-~~~W~~~~~~~~~~~~~~~~~~ 164 (254)
|.+.|..+. ..+.|.|.. ++..... ....+.+|+.+.|.|.+.+.+++ .+.|++++..+... .
T Consensus 71 C~~~n~~~s--~~~~l~V~~------~~~~~~~-~~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~~------~- 134 (175)
T 1fnl_A 71 CQTNLSTLS--DPVQLEVHI------GWLLLQA-PRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKYF------H- 134 (175)
T ss_dssp EECSSSCCC--CCEEEEEEC------SSEEEEC-SCSEEETTCCEEEEEEECTTCCCEEEEEEETTEEEEEE------E-
T ss_pred EEeeCCccc--ccEEEEEeC------CCceeeC-CCceecCCCCEEEEEEcCCCCCceEEEEEECCeEccCC------C-
Confidence 999885543 345666652 2222222 23457789999999999887665 89999999876321 1
Q ss_pred CCCCceeeEEEEccCCCCCceeEEEEEEcCCCc-ceEEEEEEEe
Q psy7036 165 KDGHSYFASLEIIDVTIEDAGKYKVTAKNELGE-SNATISLNFD 207 (254)
Q Consensus 165 ~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~-~~~~~~~~v~ 207 (254)
.+ ..|.|.+++.+|.|.|+|.|.|..+. .+..+.|.|.
T Consensus 135 ~~-----~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~ 173 (175)
T 1fnl_A 135 HN-----SDFHIPKATLKDSGSYFCRGLVGSKNVSSETVNITIT 173 (175)
T ss_dssp EC-----CCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred CC-----CEEEEcccChhhCeEEEEEEEcCCCCccCccEEEEEe
Confidence 11 27999999999999999999997654 3555666664
No 90
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.94 E-value=3.3e-25 Score=154.22 Aligned_cols=167 Identities=19% Similarity=0.352 Sum_probs=123.9
Q ss_pred eeecCCCeEEEEEEEeeCCCC--ceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEEEEEcCCCce
Q psy7036 18 RQEDEGNRLIFECQLLCNPKP--DIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKVKAKNKMGEV 95 (254)
Q Consensus 18 ~~v~~g~~v~l~C~~~~~~~~--~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~ 95 (254)
..+.+|++++|.|.+.+.+.+ .+.|+|++..+........ ...|.|. +..|+|.|+|.+.|..
T Consensus 8 ~~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~~~~----------~~~l~i~--~~~d~G~Y~C~~~n~~--- 72 (184)
T 3b5h_A 8 TVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPGQ----------KTEFKVD--SDDQWGEYSCVFLPEP--- 72 (184)
T ss_dssp EEEEETTEEEEEEEEESCSSCCCEEEEESSSEEEECTTCCCS----------EEEEEEC--GGGCCEEEEEEEESTT---
T ss_pred EEEecCCCEEEEEECCCCCCCceEEEEEeCCEEeecccccCC----------cEEEEEe--chhhCeEEEEEEECCc---
Confidence 467899999999999876666 8999999998876543211 1246665 6899999999999732
Q ss_pred EEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCC-CCeEEEEE---CCE-ecccCCcceEEEcCCCCce
Q psy7036 96 AASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADP-APTVIWSH---SGV-QVKEDKRHKFSIDKDGHSY 170 (254)
Q Consensus 96 ~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~-~~~~~W~~---~~~-~~~~~~~~~~~~~~~~~~~ 170 (254)
.....|.|. .+|.+...+....+..|+.+.|.|.+.+.| .+.+.|++ ++. .+......++....++.
T Consensus 73 ~~~~~l~V~------~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~-- 144 (184)
T 3b5h_A 73 MGTANIQLH------GPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQG-- 144 (184)
T ss_dssp SCEEEEEEC------CSCCCEESCSEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEETT--
T ss_pred CcEEEEEEe------cCCceeecCCCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecCC--
Confidence 245667775 455555555666788999999999999999 78999999 444 33322222232222221
Q ss_pred eeEEEEccCC-CCCceeEEEEEEcCCCcceEEEEEEEe
Q psy7036 171 FASLEIIDVT-IEDAGKYKVTAKNELGESNATISLNFD 207 (254)
Q Consensus 171 ~~~l~i~~~~-~~d~G~y~C~~~~~~~~~~~~~~~~v~ 207 (254)
.+.|.|.++. .+|.|.|+|.|.|..|.....+.|.|.
T Consensus 145 ~~~L~i~~v~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 182 (184)
T 3b5h_A 145 RSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRVR 182 (184)
T ss_dssp EEEEEECSCCTTTSSEEEEEEEEETTEEEEEEEEEEEC
T ss_pred eeEEEEeeccccccCceEEEEEEeCCCcceEEEEEEEe
Confidence 2479999999 999999999999999998888888775
No 91
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.94 E-value=5.8e-26 Score=160.38 Aligned_cols=183 Identities=10% Similarity=0.108 Sum_probs=128.7
Q ss_pred eEeCCCceeecCCCeEEEEEEEeeCCC-----CceEEEeC-CEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEE
Q psy7036 11 FTQKPQLRQEDEGNRLIFECQLLCNPK-----PDIVWFRG-ETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLY 84 (254)
Q Consensus 11 ~~~~~~~~~v~~g~~v~l~C~~~~~~~-----~~v~W~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 84 (254)
+...+..+.+.+|+++.|.|.+.+.+. +.+.|+|+ +.......+..+ ...........|.|.+++.+|+|.|
T Consensus 5 v~~p~~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~--~~~~~~~~~~~L~I~~v~~~D~G~Y 82 (202)
T 3bp6_B 5 VTAPKEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATL--LEEQLPLGKALFHIPSVQVRDSGQY 82 (202)
T ss_dssp EECSCSEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEE--CGGGGGGTEEEEEECSCCGGGCEEE
T ss_pred EecCCcCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEE--eeccccCCeeEEEECCCCHHHCcEE
Confidence 344556788999999999999988765 78999994 443333333322 2221122345899999999999999
Q ss_pred EEEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEc
Q psy7036 85 KVKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSID 164 (254)
Q Consensus 85 ~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~ 164 (254)
+|.+.+..+.....+.|.|.... ..|.+ ....+..|+.+.|.|.+.|.|.+.+.|++++..+.. .....
T Consensus 83 ~C~~~~~~~~~~~~~~l~V~~~~---~~p~~----~~~~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~~~----~~~~~ 151 (202)
T 3bp6_B 83 RCLVICGAAWDYKYLTVKVKASY---MRIDT----RILEVPGTGEVQLTCQARGYPLAEVSWQNVSVPANT----SHIRT 151 (202)
T ss_dssp EEEEEETTEEEEEEEEEEEEBCC---CCEEE----EEEECTTTCCEEEEEEEEEBSCCEEEETTCCSCCEE----EEEEC
T ss_pred EEEEEeCCCcceEEEEEEecCCC---CcccE----EEEecCCCCeEEEEEEccccCCceEEEEeCCCCccC----ceeeC
Confidence 99999988877778888886311 11111 112456799999999999999999999998765421 11222
Q ss_pred CCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEec
Q psy7036 165 KDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDS 208 (254)
Q Consensus 165 ~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~ 208 (254)
.++. ...+.|.++..+|.|.|+|.|.|..|.....+.|.|..
T Consensus 152 ~~~~--~~~~~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~v~~ 193 (202)
T 3bp6_B 152 PEGL--YQVTSVLRLKPQPSRNFSCMFWNAHMKELTSAIIDPLS 193 (202)
T ss_dssp TTSC--EEEEEEEEECCCTTCCEEEEEEETTTTEEEEEEECC--
T ss_pred CCCC--EEEEEEEEEEcCCCCEEEEEEEcCCcccccEEEEEecC
Confidence 2222 23577888889999999999999999988888777653
No 92
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.94 E-value=1e-26 Score=163.42 Aligned_cols=174 Identities=16% Similarity=0.146 Sum_probs=122.8
Q ss_pred CCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEE
Q psy7036 7 FAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKV 86 (254)
Q Consensus 7 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 86 (254)
.+|.|...|.. .+.+|++|+|.|.+.+ +.+.+.|+|++..+....... ........|.|.+++..|+|.|+|
T Consensus 4 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~------~~~~~~~~L~i~~v~~~D~G~Y~C 75 (196)
T 3p2t_A 4 PKPTLWAEPGS-VISWGNSVTIWCQGTL-EAREYRLDKEESPAPWDRQNP------LEPKNKARFSIPSMTEDYAGRYRC 75 (196)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTSCSCSEEECC------CSSSSEEEEEESSCCGGGCEEEEE
T ss_pred CCCEEEccCCC-cCCCCCcEEEEeeCCC-CCCEEEEEECCCCCccccccc------ccCCceEEEEeccCCcccCceEEE
Confidence 36888888877 8899999999999986 678999999987664311110 011123379999999999999999
Q ss_pred EEEcCCCc--eEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEc
Q psy7036 87 KAKNKMGE--VAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSID 164 (254)
Q Consensus 87 ~~~~~~~~--~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~ 164 (254)
.+.|..+. ....+.|.|... ..+|.+...+. ..+.+|+.++|.|.+.+. .+.+.|+|++..+...........
T Consensus 76 ~a~n~~g~~~~s~~~~l~V~~~---~~~p~~~~~~~-~~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~ 150 (196)
T 3p2t_A 76 YYRSPVGWSQPSDPLELVMTGA---YSKPTLSALPS-PLVTSGKSVTLLCQSRSP-MDTFLLCKERAAHPLLCLRSEHGA 150 (196)
T ss_dssp EEEETTEEBCCCCCEEEEEECS---SCCCEEEEESC-SEECTTCCEEEEEEEEEE-EEEEEEEETTCCCGGGSEEEEEEE
T ss_pred EEeCCCcccCCCccEEEEecCC---CCCCEEEeCCc-ceecCCCeEEEEEecCCC-CCEEEEEeCCCcccceeecccccc
Confidence 99998872 344566666531 12333333332 256789999999998874 458999999876643321111000
Q ss_pred CCCCceeeEEEEccCCCCCceeEEEEEEcCCC
Q psy7036 165 KDGHSYFASLEIIDVTIEDAGKYKVTAKNELG 196 (254)
Q Consensus 165 ~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~ 196 (254)
......|.|.+++.+|+|.|+|.|.|..+
T Consensus 151 ---~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~ 179 (196)
T 3p2t_A 151 ---QQHQAEFPMSPVTSVHGGTYRCFSSHGFS 179 (196)
T ss_dssp ---EEEEEEEEECSCCGGGCEEEEEEEECGGG
T ss_pred ---cCcceEEEeCCCcccCCCeEEEEEEcCCC
Confidence 01123799999999999999999999876
No 93
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.94 E-value=1.1e-25 Score=175.80 Aligned_cols=178 Identities=17% Similarity=0.201 Sum_probs=127.1
Q ss_pred CCCceeecCCCeEEEEEEEee-CCCCceEEEeCCEEeeeCCcceEEEeecC-CcceEEEEEEeccCCCCCeEEEEEEEcC
Q psy7036 14 KPQLRQEDEGNRLIFECQLLC-NPKPDIVWFRGETQLSEDTRTVMKTTPIG-TNKYLVALELDDVIETDAGLYKVKAKNK 91 (254)
Q Consensus 14 ~~~~~~v~~g~~v~l~C~~~~-~~~~~v~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~i~~~~~~d~G~Y~C~~~~~ 91 (254)
.+....+.+|+.+.|.|.+.| .|.+.++|+|++..+.....+........ .......|.|.+++..|+|.|+|.|.|.
T Consensus 233 ~~~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~ 312 (423)
T 3qs7_E 233 TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH 312 (423)
T ss_dssp STTEEEEETTSCEEEEEEEEESSSCCCEEEEESSSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCTTTCEEEEEEETTE
T ss_pred CCCceEEeCCCeEEEEEEEEcCCCCcEEEEEECCEEccccceeecccccCCceeEEEEEEEEeecCHHHCEEEEEEEecC
Confidence 445667899999999999998 67799999999987754322211111111 1122337999999999999999999987
Q ss_pred CCceEEEEEEEEeccccCCCCCccccCC--CeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCc
Q psy7036 92 MGEVAASINLNFSREQIDGLAPTFLKKP--SIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHS 169 (254)
Q Consensus 92 ~~~~~~~~~l~v~~~~~~~~~~~~~~~~--~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~ 169 (254)
....+.|.|.. +|.+...+ ....+.+|+.+.|.|.+.+.|.|.+.|+|++..+...... ..+..
T Consensus 313 ---~~~~~~L~V~~------~p~i~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~----~~~~~- 378 (423)
T 3qs7_E 313 ---PSQSALVTIVE------KGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKG----LDNGY- 378 (423)
T ss_dssp ---EEEEEEEEEES------SCEEEEC---CEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCB----CSSSS-
T ss_pred ---CCceEEEEEEe------CCcceEcCCCccEEecCCCeEEEEEEEEEcCCCeEEEEECCEECCCcccc----ccCCc-
Confidence 56677788863 33332222 3456778999999999999999999999999988644310 00111
Q ss_pred eeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEec
Q psy7036 170 YFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDS 208 (254)
Q Consensus 170 ~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~ 208 (254)
.+.+.....+|+|.|+|.|.|..|....++.|.|..
T Consensus 379 ---~~~~~~~~~~D~G~YtC~A~N~~G~~~~s~~L~v~~ 414 (423)
T 3qs7_E 379 ---SISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRS 414 (423)
T ss_dssp ---EEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC---
T ss_pred ---EEEEEecccccCEEEEEEEEcCCceEEEEEEEEEec
Confidence 222345567899999999999999999998888875
No 94
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.94 E-value=6.1e-26 Score=178.83 Aligned_cols=237 Identities=12% Similarity=0.169 Sum_probs=148.3
Q ss_pred CCeeEeCCCceeecCCCeEEEEEEEeeC-CCC-ceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEE
Q psy7036 8 APSFTQKPQLRQEDEGNRLIFECQLLCN-PKP-DIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYK 85 (254)
Q Consensus 8 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~-~~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 85 (254)
+|.+...+....+.+|+.++|.|.+.|. |.+ .++|++++..+......... ..+.....+.|.|.++...| |.|+
T Consensus 123 ~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~--~~~~~~~~s~L~i~~~~~~d-g~Y~ 199 (444)
T 1igt_B 123 APSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVL--QSDLYTLSSSVTVTSSTWPS-QSIT 199 (444)
T ss_dssp CCEEEEECCCSSCCCSSCEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEE--ETTEEEEEEEEEECSTTTTT-SCCE
T ss_pred CCceeEecccccCCCCCcEEEEEEEcceeCCCcEEEEecCCCCCCeEecCccc--cCCcEEEEEEEEEchhhcCC-CeEE
Confidence 4544432323345799999999999884 766 99999988753111000011 01112223479999999999 9999
Q ss_pred EEEEcCCCceEEEEEEEEecc------------ccCCCCCcc-ccCCCeee-ecCCCeEEEEEEEeeCC----CCeEEEE
Q psy7036 86 VKAKNKMGEVAASINLNFSRE------------QIDGLAPTF-LKKPSIRQ-EDDGKRLLFECRIQADP----APTVIWS 147 (254)
Q Consensus 86 C~~~~~~~~~~~~~~l~v~~~------------~~~~~~~~~-~~~~~~~~-~~~g~~~~l~C~~~~~~----~~~~~W~ 147 (254)
|.+.|..+.......+.+.+. .....+|.+ ...+.... +..|+.+.|.|.+.+.+ .+.+.|+
T Consensus 200 C~a~n~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~ 279 (444)
T 1igt_B 200 CNVAHPASSTKVDKKIEPRGPTIKPCPPCKCPAPNLLGGPSVFIFPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWF 279 (444)
T ss_dssp EEEEETTTTEEEEEECCCCCCSCCCCCCCSCCCSCCCCCCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTCCCCEEEEE
T ss_pred EEEEeCCCCcceEEEeccCCCCcccCCccccCCcccCCCceEEecCCchhheeecCCCcEEEEEEeecccCCCCeEEEEE
Confidence 999999887544444432100 000113332 22222222 47899999999999874 3589999
Q ss_pred ECCEecccCCcceEEEcCCC-CceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEecCCCCCCCCCCCCeeecCC
Q psy7036 148 HSGVQVKEDKRHKFSIDKDG-HSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDSDDAPVPGEGTKPVFTERP 226 (254)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~ 226 (254)
+++..+............++ ....+.|.|.+++.+|.|.|+|.|.|..+.......+.+... ...+|.+...+
T Consensus 280 k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~------~~~~P~v~~~~ 353 (444)
T 1igt_B 280 VNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWMSGKEFKCKVNNKDLPAPIERTISKPKG------SVRAPQVYVLP 353 (444)
T ss_dssp ETTEECSSTTCBCCEEECSSSEEEEEEEECCHHHHHTTCEEEEEEECTTCSSCEEEEEECCCC------CCBCCEEEEEC
T ss_pred ECCccccCcccccceeCCCCcEEEEEEEEEcHHHhccCCcEEEEEEcCCCCCceEEEEeccCC------CCCCCEEEEeC
Confidence 99988754332222222222 234468999999999999999999999887644444432100 12356665444
Q ss_pred ccccccCCCCcEEEEEEEecc-CCC-ceeC
Q psy7036 227 VTKQSDDDLNDIVIECRLVGE-PEP-TISW 254 (254)
Q Consensus 227 ~~~~~~~g~~~~~l~C~~~~~-p~p-~~~W 254 (254)
.......++ .+.|.|.+.|. |.+ .++|
T Consensus 354 ~~~~~~~~~-~~~L~C~~~g~~P~~~~v~W 382 (444)
T 1igt_B 354 PPEEEMTKK-QVTLTCMVTDFMPEDIYVEW 382 (444)
T ss_dssp CCGGGTTSS-EEEEEEEEEEEBSSCCEEEE
T ss_pred CChHHccCC-eEEEEEEEEeeeCCCCEEEE
Confidence 333345677 79999999994 666 7888
No 95
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.94 E-value=1.2e-25 Score=160.07 Aligned_cols=183 Identities=12% Similarity=0.148 Sum_probs=123.9
Q ss_pred eCCCceeecCC--CeEEEEEEEeeCCCCceEEEeC---CEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEEE
Q psy7036 13 QKPQLRQEDEG--NRLIFECQLLCNPKPDIVWFRG---ETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKVK 87 (254)
Q Consensus 13 ~~~~~~~v~~g--~~v~l~C~~~~~~~~~v~W~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 87 (254)
..|..+.+.+| ++++|.|.+.+ |.+.++|+++ +..+....+.. ..... .|.|.+++.+|+|.|+|.
T Consensus 12 ~~p~~v~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~~~~~~--~~~~~------~l~I~~v~~~D~G~Y~C~ 82 (213)
T 2x1w_L 12 DQHGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGNRIS--WDSKK------GFTIPSYMISYAGMVFCE 82 (213)
T ss_dssp --CEEEEECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECCCSSSCE--EETTT------EEEEEGGGTTTCSEEEEE
T ss_pred CCceEEEEecCCCccEEEeeccCC-CCcEEEEEhhcCCCccccCCCccc--ccCCc------cEEEccCChhcCceEEEE
Confidence 45678889999 99999999975 7789999884 55555443222 12111 699999999999999999
Q ss_pred EEcCCCceEE-EEEEEEeccccCCCCCccc-cCCCeeeecCCCeEEEEEEEeeCC--CCeEEEEECCEecccCCc-ceEE
Q psy7036 88 AKNKMGEVAA-SINLNFSREQIDGLAPTFL-KKPSIRQEDDGKRLLFECRIQADP--APTVIWSHSGVQVKEDKR-HKFS 162 (254)
Q Consensus 88 ~~~~~~~~~~-~~~l~v~~~~~~~~~~~~~-~~~~~~~~~~g~~~~l~C~~~~~~--~~~~~W~~~~~~~~~~~~-~~~~ 162 (254)
+.|..+.... .+.|.|.. ..+|.+. .......+.+|+.++|.|.+.+.| .+.+.|++++..+..... ....
T Consensus 83 a~n~~~~~~s~~~~l~v~~----~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~~ 158 (213)
T 2x1w_L 83 AKINDESYQSIMYIVVVVG----YRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDL 158 (213)
T ss_dssp EC----CEECCCEEEEECB----CCEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEEEE
T ss_pred EEECCeeEEEEEEEEEEeC----CcccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEEEecccc
Confidence 9885443322 25666632 1122222 233344788999999999999865 357999998876432211 0000
Q ss_pred EcCCC---CceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEec
Q psy7036 163 IDKDG---HSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDS 208 (254)
Q Consensus 163 ~~~~~---~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~ 208 (254)
....+ ....+.|.|.+++.+|+|.|+|.|.|..|....++.|.|..
T Consensus 159 ~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~ 207 (213)
T 2x1w_L 159 KTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHE 207 (213)
T ss_dssp CCCSSCSCEEEEEEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred ccccCccceeeeEEEEECCCCcccCEEEEEEEecCCCcEEEEEEEEEec
Confidence 00010 22345899999999999999999999999988888888874
No 96
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.94 E-value=3.9e-26 Score=157.75 Aligned_cols=166 Identities=18% Similarity=0.243 Sum_probs=123.7
Q ss_pred CCCeeEeCCCceeecCCCeEEEEEEEeeCCCC-ceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEE
Q psy7036 7 FAPSFTQKPQLRQEDEGNRLIFECQLLCNPKP-DIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYK 85 (254)
Q Consensus 7 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 85 (254)
.+|.|...|....+.+|++++|.|.+.+.+.+ .+.|++++..+..... .|.|.+++..|+|.|+
T Consensus 3 ~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~~~~~---------------~L~i~~v~~~d~G~Y~ 67 (176)
T 1f2q_A 3 QKPKVSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEETNS---------------SLNIVNAKFEDSGEYK 67 (176)
T ss_dssp -CCCCEEESSCSEEETTCCEEEECCTTCC----CCEEEETTEECSCCSS---------------EEEECSCCGGGCEEEE
T ss_pred CCCEEEcCCCCcceecCCcEEEEEeCCCCCCcceEEEEECCeECCCCce---------------EEEEeccceecCEEEE
Confidence 46888888888889999999999999877764 6999999988764211 7999999999999999
Q ss_pred EEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEe-eCCCCeEEEEECCEecccCCcceEEEc
Q psy7036 86 VKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQ-ADPAPTVIWSHSGVQVKEDKRHKFSID 164 (254)
Q Consensus 86 C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~~~~~~~~W~~~~~~~~~~~~~~~~~~ 164 (254)
|.+.+..+.. .+.|.|.. ++.... .....+.+|+.+.|.|.+. +.|.+.+.|++++..+.....
T Consensus 68 C~~~~~~~s~--~~~l~V~~------~~~~~~-~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~------ 132 (176)
T 1f2q_A 68 CQHQQVNESE--PVYLEVFS------DWLLLQ-ASAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYWYE------ 132 (176)
T ss_dssp EECTTSSCCC--CEEEEEEC------SSEEEE-ESCSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECCSCCC------
T ss_pred EEcCCccccc--cEEEEEeC------cceeec-CCcceeeCCCCEEEEEEecCCCCceEEEEEECCEEEeeecC------
Confidence 9998866543 45555541 222221 2234567899999999994 566779999999988742211
Q ss_pred CCCCceeeEEEEccCCCCCceeEEEEEEcCCCc-ceEEEEEEEec
Q psy7036 165 KDGHSYFASLEIIDVTIEDAGKYKVTAKNELGE-SNATISLNFDS 208 (254)
Q Consensus 165 ~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~-~~~~~~~~v~~ 208 (254)
+ ..|.|.+++.+|+|.|+|.|.|..+. .+..+.|.|..
T Consensus 133 -~-----~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~ 171 (176)
T 1f2q_A 133 -N-----HNISITNATVEDSGTYYCTGKVWQLDYESEPLNITVIK 171 (176)
T ss_dssp -S-----SEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred -C-----CeEEECCCCcccCEEEEEEEEeCCcceEecCEEEEEec
Confidence 1 27999999999999999999997443 34556777764
No 97
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.94 E-value=9.1e-26 Score=168.05 Aligned_cols=208 Identities=14% Similarity=0.172 Sum_probs=136.1
Q ss_pred CeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEEEE
Q psy7036 9 PSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKVKA 88 (254)
Q Consensus 9 p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 88 (254)
|.|........+.+|++++|.|.+.+. ++|++++..+.. .... .........|.|.+++..|+|.|+|.+
T Consensus 1 P~i~~~~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~~~~----~~~~--~~~~~~~~~L~i~~~~~~D~G~Y~C~a 70 (289)
T 3mjg_X 1 LVVTPPGPELVLNVSSTFVLTCSGSAP----VVWERMSQEPPQ----EMAK--AQDGTFSSVLTLTNLTGLDTGEYFCTH 70 (289)
T ss_dssp CCBCSSCSEEECCTTCCEEEEEEESSC----CEEEBTTBCCSE----EEEE--CTTSCEEEEEEECSCCGGGCEEEEEEC
T ss_pred CeecCCCCeEEEeCCCcEEEEEeccce----EEEECCCCCccc----ceec--cCCCceeEEEEEccCChhhCEEEEEEE
Confidence 455555666788999999999999764 999999987631 1111 112223458999999999999999999
Q ss_pred EcCCCc---eEEEEEEEEeccccCCCCCccccCCCe---eeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEE
Q psy7036 89 KNKMGE---VAASINLNFSREQIDGLAPTFLKKPSI---RQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFS 162 (254)
Q Consensus 89 ~~~~~~---~~~~~~l~v~~~~~~~~~~~~~~~~~~---~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~ 162 (254)
.|..|. ....+.|.|... ..+ +...... ..+.+|+.+.|.|.+. .|.+.+.|++++....... .
T Consensus 71 ~n~~g~~~~~~~~~~v~v~~p----~~~-~~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~w~~~~~~~~~~~--~-- 140 (289)
T 3mjg_X 71 NDSRGLETDERKRLYIFVPDP----TVG-FLPNDAEELFIFLTEITEITIPCRVT-DPQLVVTLHEKKGDVALPV--P-- 140 (289)
T ss_dssp CC------CCCEEEEEECCCT----TCC-BCCCCHHHHEEEESSCCCEEECCCBS-CTTSCEEEEESSCCSCCCC--C--
T ss_pred cccCCCCcCcEEeEEEEEECC----CcC-cccCCCCcceEEeecCCeEEEEeEcC-CCCceEEEEeCCCCCccce--e--
Confidence 988765 334455554321 111 1111111 5678899999999997 7778899998652221110 0
Q ss_pred EcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcc-eEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEE
Q psy7036 163 IDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGES-NATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIE 241 (254)
Q Consensus 163 ~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~ 241 (254)
..... .+. ...|.|.|+|.|.|..+.. ...+.+.+... .+|.+...+....+.+|+ .+.|.
T Consensus 141 ~~~~~-----~~~----~~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~~--------~~p~i~~~~~~~~v~~G~-~v~L~ 202 (289)
T 3mjg_X 141 YDHQR-----GFS----GIFEDRSYICKTTIGDREVDSDAYYVYRLQV--------SSINVSVNAVQTVVRQGE-NITLM 202 (289)
T ss_dssp EETTT-----EEE----ECCCSSEEEEEEEETTEEEECCCEEEEECCC--------CCCCCEEEESCSEEETTS-CEEEE
T ss_pred ecCCc-----Cee----eeccCcEEEEEEEeCCceeeeeeEEEEecCC--------CCCCcEEeCCcceeEcCC-CEEEE
Confidence 11111 111 2569999999999876644 33345555532 244455555556788899 99999
Q ss_pred EEEeccCCCceeC
Q psy7036 242 CRLVGEPEPTISW 254 (254)
Q Consensus 242 C~~~~~p~p~~~W 254 (254)
|.+.|.|.|.++|
T Consensus 203 C~~~g~p~p~v~W 215 (289)
T 3mjg_X 203 CIVIGNEVVNFEW 215 (289)
T ss_dssp EEEESCSSBEEEE
T ss_pred EEECCCCCcceEE
Confidence 9999999999998
No 98
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.94 E-value=1.3e-25 Score=177.51 Aligned_cols=235 Identities=14% Similarity=0.180 Sum_probs=146.4
Q ss_pred CCCceeecCCCeEEEEEEEeeCC--CCceEEEeC--CE---Ee-ee-----------CCcceEEEeecCCcceEEEEEEe
Q psy7036 14 KPQLRQEDEGNRLIFECQLLCNP--KPDIVWFRG--ET---QL-SE-----------DTRTVMKTTPIGTNKYLVALELD 74 (254)
Q Consensus 14 ~~~~~~v~~g~~v~l~C~~~~~~--~~~v~W~~~--~~---~~-~~-----------~~~~~~~~~~~~~~~~~~~l~i~ 74 (254)
.+..+.+.+|++++|.|.+.+.+ .+.+.|||+ +. .+ .. ....++....+. ....+.|.|.
T Consensus 6 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~-~~~~~~L~I~ 84 (457)
T 1hzh_H 6 QSGAEVKKPGASVKVSCQASGYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADT-SANTAYMELR 84 (457)
T ss_dssp ECCCEEECTTCCEEECEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEET-TTTEEEEEEC
T ss_pred cCCceEEcCCCCEEEEEEecCccccCcEEEEEEeCCCCCcEEEEEEecCCCceecCccccCceEEEEeC-CCCEEEEEEC
Confidence 45567899999999999998765 678999984 21 11 00 011122222111 1234589999
Q ss_pred ccCCCCCeEEEEEEEcCCC------------ceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeC-CC
Q psy7036 75 DVIETDAGLYKVKAKNKMG------------EVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQAD-PA 141 (254)
Q Consensus 75 ~~~~~d~G~Y~C~~~~~~~------------~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~ 141 (254)
+++.+|+|.|+|.+.+..+ .......|.|... ...+|.+........+..|+.+.|.|.+.+. |.
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~--~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~ 162 (457)
T 1hzh_H 85 SLRSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSA--STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPE 162 (457)
T ss_dssp SCCGGGCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSC--CCBCCEEEEECCCSCCCTTCCEEEEEEEESBBSC
T ss_pred CCCcccCEEEEEEEecCCccccccccccccceECCcEEEEecCC--CCCCCeEEecCccccccCCCcEEEEEEEeEEeCC
Confidence 9999999999999998764 1223456666531 1123433322222345689999999999886 54
Q ss_pred -CeEEEEECCEecccCCcceEEEcCCC-CceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEecCC-------CC
Q psy7036 142 -PTVIWSHSGVQVKEDKRHKFSIDKDG-HSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDSDD-------AP 212 (254)
Q Consensus 142 -~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~~~-------~~ 212 (254)
+.+.|++++..+........ ...++ +...+.|.|.++..+| |.|+|.|.|..+.......+.+.... .+
T Consensus 163 ~~~v~W~k~~~~~~~~~~~~~-~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~~~~~~~ 240 (457)
T 1hzh_H 163 PVTVSWNSGALTSGVHTFPAV-LQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKAEPKSCDKTHTCPPCP 240 (457)
T ss_dssp CCEEEETTTTBCTTEEEEEEE-ECTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGGGTEEEEEECCCCCSCSSCSCCSCC
T ss_pred CeEEEEEeCCEeccceEcCce-ECCCCCEEEEEEEEecccccCC-ceEEEEEEeCCCCcceeEEecccCCCcccccCCCC
Confidence 78999999865432111111 12222 2334579999999999 99999999987765555444433210 00
Q ss_pred CCCCCCCCee-ecCCcccc-ccCCCCcEEEEEEEeccCCC----ceeC
Q psy7036 213 VPGEGTKPVF-TERPVTKQ-SDDDLNDIVIECRLVGEPEP----TISW 254 (254)
Q Consensus 213 ~~~~~~~p~~-~~~~~~~~-~~~g~~~~~l~C~~~~~p~p----~~~W 254 (254)
.+....+|.+ ...|.... +.+|+ .+.|.|.+.|.|++ .++|
T Consensus 241 ~~~~~~~p~v~~~~p~~~~~~~~G~-~v~L~C~~~g~~p~p~~~~i~W 287 (457)
T 1hzh_H 241 APELLGGPSVFLFPPKPKDTLMISR-TPEVTCVVVDVSHEDPEVKFNW 287 (457)
T ss_dssp CCCCSSSCEEEEECCCHHHHHCTTS-CCCEEEEEECCCTTCCCCEEEE
T ss_pred CccccCCceEEeECcCchhhcccCC-ceEEEEEEEcccCCCCceEEEE
Confidence 0001124554 44444333 67788 99999999998553 7888
No 99
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.94 E-value=1.9e-27 Score=182.71 Aligned_cols=196 Identities=9% Similarity=0.090 Sum_probs=137.9
Q ss_pred ceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeC--C----------cceEEEeecCCcceEEEEEEeccCCCCCeEE
Q psy7036 17 LRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSED--T----------RTVMKTTPIGTNKYLVALELDDVIETDAGLY 84 (254)
Q Consensus 17 ~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~--~----------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 84 (254)
.+.+.+|++++|.|.+.+.|.+.+.|+|++..+... . ..++....+........|.|.+++.+|+|.|
T Consensus 3 ~v~~~~G~~v~L~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 82 (363)
T 1wio_A 3 VVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTY 82 (363)
T ss_dssp EEEEETTSCEEECCCCTTCSSCCEEEEETTCCEEEEEETTEEEECSSTTGGGEECCHHHHHTTCCCEEECSCCGGGCEEE
T ss_pred eEEEeCCCeEEEEEEecCCCceEEEEEeCCccceeccCccEEecCCcccccceeeeeccccCCeEEEEECCCCHHHCEEE
Confidence 457889999999999988899999999998532111 1 1111110000001123699999999999999
Q ss_pred EEEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEc
Q psy7036 85 KVKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSID 164 (254)
Q Consensus 85 ~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~ 164 (254)
+|.+.|.. ..+.|.|.... .. + ...+.+|+.+.|.|.+.+.|.+.+.|++++..+. .
T Consensus 83 ~C~~~n~~----~~~~l~V~~~~---~~------~-~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~--------~- 139 (363)
T 1wio_A 83 ICEVEDQK----EEVQLLVFGLT---AN------S-DTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNI--------Q- 139 (363)
T ss_dssp EEEETTEE----EEEEEEEEEEE---ES------S-CSSEESBSCEEEEEECCTTCCCCEEEECSSSCEE--------E-
T ss_pred EEEEEECC----CcEEEEEEeCC---CC------C-ceEEecCCCEEEEEEcCCCCCCeEEEEcCCCccc--------c-
Confidence 99998764 25566665311 11 1 1246789999999999889999999999875431 1
Q ss_pred CCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEE
Q psy7036 165 KDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRL 244 (254)
Q Consensus 165 ~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~ 244 (254)
.. ..|.|.+++.+|+|.|+|.+.|..+.....+.+.|.. +|. .+....+.+|+ .+.|.|.+
T Consensus 140 ~~-----~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v~~----------~p~---~~~~~~~~~G~-~v~l~C~~ 200 (363)
T 1wio_A 140 GG-----KTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLA----------FQK---ASSIVYKKEGE-QVEFSFPL 200 (363)
T ss_dssp ES-----SEEEECSBCGGGCEECEEEEEETTEEEEECCEECEEC----------CSC---SEEEEEEETBC-CEEEECCC
T ss_pred cc-----eEEEEeeCChhcCCEEEEEEecCCCeEEEEEEEEEec----------CCC---CCCceEEecCC-EEEEEEEE
Confidence 11 2799999999999999999998766666666666653 111 12444567888 99999988
Q ss_pred ec-----cCCCceeC
Q psy7036 245 VG-----EPEPTISW 254 (254)
Q Consensus 245 ~~-----~p~p~~~W 254 (254)
.+ +|.|.++|
T Consensus 201 ~~~~~~~~P~p~i~W 215 (363)
T 1wio_A 201 AFTVEKLTGSGELWW 215 (363)
T ss_dssp CCCCCSSCEEEEEEE
T ss_pred ecccccCCCceeEEE
Confidence 87 78888988
No 100
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.94 E-value=6.9e-27 Score=176.27 Aligned_cols=184 Identities=18% Similarity=0.295 Sum_probs=137.9
Q ss_pred ceeecCCCeEEEEEEEee----------CCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEE
Q psy7036 17 LRQEDEGNRLIFECQLLC----------NPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKV 86 (254)
Q Consensus 17 ~~~v~~g~~v~l~C~~~~----------~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 86 (254)
...+.+|+.+.|.|.+.+ .|.+.+.|++++..+....+...... + ....|.|.+++..|+|.|+|
T Consensus 107 ~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~--~---~~~~L~i~~~~~~d~G~Y~C 181 (317)
T 2y25_A 107 KKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVT--G---EQIWLQINEPTPNDKGKYVM 181 (317)
T ss_dssp HHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCCCCSSEEEEEC--S---SEEEEEEESCCGGGCEEEEE
T ss_pred ceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEECCCCCCeEEecc--C---CEEEEEECcCCcccCeeEEE
Confidence 344568888888888876 68899999999998876655444322 1 23379999999999999999
Q ss_pred EEEcCCCceEEEEEEEEecc--------------ccCCCCCccc-cCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCE
Q psy7036 87 KAKNKMGEVAASINLNFSRE--------------QIDGLAPTFL-KKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGV 151 (254)
Q Consensus 87 ~~~~~~~~~~~~~~l~v~~~--------------~~~~~~~~~~-~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~ 151 (254)
.+.|..|.....+.+.|... .....+|.+. ..+....+..|+.+.|.|.+.+.|.+.+.|++++.
T Consensus 182 ~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~ 261 (317)
T 2y25_A 182 ELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEK 261 (317)
T ss_dssp EEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHHHHTTTSCEEEEBCCSEEEEETTSBBCEEEEEECSSCCEEEEEESSS
T ss_pred EEEeCCceEEEEEEEeeeeccccchhhcccCCcccCcCCCCcccccCCccEEEEcCCEEEEEEEEecCCCCEEEEEECCE
Confidence 99998888777777665310 0011122222 23445678899999999999999999999999999
Q ss_pred ecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEec
Q psy7036 152 QVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDS 208 (254)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~ 208 (254)
.+.......+.... +. .+.|.|.+++.+|.|.|+|.|.|..|....++.|.|..
T Consensus 262 ~~~~~~~~~~~~~~-~~--~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 315 (317)
T 2y25_A 262 ALASDDHCNLKFEA-GR--TAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVFI 315 (317)
T ss_dssp EECCCSSEEECCBT-TT--EEEEEEBSCCSTTCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred eCCCCCcEEEEEcC-CC--EEEEEECCCCHHHCEEEEEEEEeCCCeEEEEEEEEEEc
Confidence 88765543332221 21 24899999999999999999999999998888888863
No 101
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.94 E-value=5e-25 Score=167.03 Aligned_cols=188 Identities=15% Similarity=0.135 Sum_probs=133.2
Q ss_pred CCeeEeCCCceeecCCCeEEEEEEEeeCC-CCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEE
Q psy7036 8 APSFTQKPQLRQEDEGNRLIFECQLLCNP-KPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKV 86 (254)
Q Consensus 8 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~-~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 86 (254)
+|.+...+....+.+|+.+.|.|.+.+.| .+.++|+|++..+..... ++... .. .|.|.+++.+|+|.|+|
T Consensus 128 ~p~~~~~~~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~~~-~~~~~-~~------~L~I~~v~~~D~G~Y~C 199 (329)
T 3oq3_B 128 PPSCIPETYELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIIDGT-KYSQS-GQ------NLIIHNPELEDSGRYDC 199 (329)
T ss_dssp CCSCEEEEEETTSSTTTCEEEECCCCSCCCCCEEEEEETTEECCCSSS-SEEEE-TT------EEEECSCCGGGCEEEEE
T ss_pred CCcEeccccceEEeCCCcEEEEeccCCCCCCceEEEEECCccCCCCCc-eEecC-CC------EEEEeecChhhCEEEEE
Confidence 34443333334467899999999999988 899999999998853322 22222 11 79999999999999999
Q ss_pred EEEcC--CCceEE----EEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCC---CC-eEEEEECCEeccc-
Q psy7036 87 KAKNK--MGEVAA----SINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADP---AP-TVIWSHSGVQVKE- 155 (254)
Q Consensus 87 ~~~~~--~~~~~~----~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~---~~-~~~W~~~~~~~~~- 155 (254)
.+.|. .|.... .+.|.|...+.. ..... .+....+..|+.+.|.|.+.+.| .+ .+.|++++..+..
T Consensus 200 ~a~n~~~~g~~~~~~s~~~~l~V~~~~~~--~~~~~-~~~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~~g~~i~~~ 276 (329)
T 3oq3_B 200 YVHYDDVRIKNDIVVSRCKILTVIPSQDH--RFKLI-LDPKINVTIGEPANITCTAVSTSLLVDDVLIDWENPSGWIIGL 276 (329)
T ss_dssp EEEECCTTSSSCEEEEEEEEEEEECCCCC--CEEEE-CCSEEEECTTSCEEEEEEEEETTCCTTCCEEEEECTTSCBCCB
T ss_pred EEEecccCCCceeEEEeeEEEEEECCCCC--CCcee-cCCeeEEecCCCEEEEEEEEECCCCCCCcEEEEEECCeeeecc
Confidence 99986 544322 366777532110 00222 45567888999999999999998 77 8999999887432
Q ss_pred CCcceEEEcCCCCceeeEEEEccCCCCCce-eEEEEEEcCCCcceEEEEEEE
Q psy7036 156 DKRHKFSIDKDGHSYFASLEIIDVTIEDAG-KYKVTAKNELGESNATISLNF 206 (254)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G-~y~C~~~~~~~~~~~~~~~~v 206 (254)
...........+....+.|.|.+++.+|.| .|+|.|.|..|....++.|.|
T Consensus 277 ~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~~Y~C~a~N~~G~~~~~~~l~v 328 (329)
T 3oq3_B 277 DFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNYYFDKTLTTTVVL 328 (329)
T ss_dssp CSSEEEEEEEETTEEEEEEEESSCCGGGTTCEEEEEEECSSCEEEEEEEEEE
T ss_pred CCceeeeecccCceeEeEEEEEeccHHHCCCcEEEEEEecCCceEEEEEEEe
Confidence 222111111122234568999999999999 999999999999888877765
No 102
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.94 E-value=3.1e-25 Score=156.40 Aligned_cols=182 Identities=14% Similarity=0.123 Sum_probs=121.7
Q ss_pred eEeCCCcee-ecCCCeEEEEEEEeeCCCCceEEEeCCE-EeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEEEE
Q psy7036 11 FTQKPQLRQ-EDEGNRLIFECQLLCNPKPDIVWFRGET-QLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKVKA 88 (254)
Q Consensus 11 ~~~~~~~~~-v~~g~~v~l~C~~~~~~~~~v~W~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 88 (254)
+...|.... +.+|++++|.|.+.|.|.+.+.|+++.. .+. ...... + ....|.|.+++..|+|.|+|.+
T Consensus 3 v~i~p~~~~~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~~----~~~~~~--~---~~~~L~I~~v~~~D~G~Y~C~a 73 (202)
T 1vca_A 3 IETTPESRYLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPLN----GKVTNE--G---TTSTLTMNPVSFGNEHSYLCTA 73 (202)
T ss_dssp EEEESSSEEEEETTSCEEEEEEEESCSSCEEEEEETTCCCCS----SEEEEE--T---TEEEEEESSCCGGGCSEEEEEE
T ss_pred EEECCCCcEEEcCCCcEEEEEeecCCCCCeEEEECCCCCCcc----ceEEEc--C---CccEEEECcCCHHHCEEEEEEE
Confidence 445555544 4599999999999999999999998432 111 111111 1 1236999999999999999999
Q ss_pred EcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCC---CeEEEEECCEecccCCcceEEEcC
Q psy7036 89 KNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPA---PTVIWSHSGVQVKEDKRHKFSIDK 165 (254)
Q Consensus 89 ~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~---~~~~W~~~~~~~~~~~~~~~~~~~ 165 (254)
.|..+.....+.|.|... |........ ..+.+|+.++|.|.+.+.++ +.+.|+|++..+....... ....
T Consensus 74 ~n~~~~~~~~~~l~V~~~-----p~~~~~~~~-~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~~-~~~~ 146 (202)
T 1vca_A 74 TCESRKLEKGIQVEIYSF-----PKDPEIHLS-GPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLE-DADR 146 (202)
T ss_dssp EETTEEEEEEEEEEEEBC-----CSCCEEEES-SCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECCS-CCSS
T ss_pred EECCceEeeEEEEEEEeC-----CCCCEeCCc-eEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECccccccc-ccCc
Confidence 999887777888888631 211111122 45778999999999987643 3799999998774321000 0000
Q ss_pred C-CCceeeEEEEccCCCCCceeEEEEEEcCCCcc-------eEEEEEEEec
Q psy7036 166 D-GHSYFASLEIIDVTIEDAGKYKVTAKNELGES-------NATISLNFDS 208 (254)
Q Consensus 166 ~-~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~-------~~~~~~~v~~ 208 (254)
. .....+.|.|.....+|.|.|+|.|.|..+.. ..++.|.|..
T Consensus 147 ~~~~~~~~~l~i~~~~~d~~g~ytC~A~n~~~~~~~~~~~~~~~~~L~V~y 197 (202)
T 1vca_A 147 KSLETKSLEVTFTPVIEDIGKVLVCRAKLHIDEMDSVPTVRQAVKELQVYI 197 (202)
T ss_dssp CCCEEEEEEEEECCCGGGTTCEEEEEEEECSCCCTTSCSEEEEEEECCEEC
T ss_pred CcceEEEEEEEEEeeeccCCCeEEEEEEccccCCCCcceeEeeEEEEEEec
Confidence 0 11223467788888889999999999987652 3456666653
No 103
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.94 E-value=1.8e-25 Score=163.04 Aligned_cols=181 Identities=17% Similarity=0.234 Sum_probs=123.1
Q ss_pred eEeCCCceeecCCCeEEEEEEEee---CCCCceEEEeCCEEee-----e-----------------------CCcceEEE
Q psy7036 11 FTQKPQLRQEDEGNRLIFECQLLC---NPKPDIVWFRGETQLS-----E-----------------------DTRTVMKT 59 (254)
Q Consensus 11 ~~~~~~~~~v~~g~~v~l~C~~~~---~~~~~v~W~~~~~~~~-----~-----------------------~~~~~~~~ 59 (254)
+...+..+.+.+|++++|.|.+.+ .+.+.+.|++++.... . ....+...
T Consensus 5 v~~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 84 (250)
T 2fbo_J 5 VRTTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASV 84 (250)
T ss_dssp EECSCSEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEEC
T ss_pred EEcCCCceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEe
Confidence 445666788999999999999987 7788999999874321 0 00111111
Q ss_pred eecCCcceEEEEEEeccCCCCCeEEEEEEEcCCCce-----EEEEEEEEeccccCCCCCccc-cCCCeeeecCCCeEEEE
Q psy7036 60 TPIGTNKYLVALELDDVIETDAGLYKVKAKNKMGEV-----AASINLNFSREQIDGLAPTFL-KKPSIRQEDDGKRLLFE 133 (254)
Q Consensus 60 ~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~-----~~~~~l~v~~~~~~~~~~~~~-~~~~~~~~~~g~~~~l~ 133 (254)
... ....|.|.+++.+|+|.|+|.+.+..+.. ...+.|.|.... .++.+. ..+....+.+|+.+.|.
T Consensus 85 ~~~----~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~---~~~~~~~~~~~~~~v~~g~~v~L~ 157 (250)
T 2fbo_J 85 ANL----AAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHT---PSNNVHVSTAEVVQVDEGNDITMT 157 (250)
T ss_dssp SCT----TSCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTS---CCSCCEECCCSEEECCTTCCEEEC
T ss_pred ccC----CcceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccC---CCCeEEEecCceEEecCCCcEEEE
Confidence 110 12379999999999999999999877642 456777775321 122222 33445667789999999
Q ss_pred EEEeeCCCCeEEEEECCEecccCCcceEEE------------cC--CCCc---eeeEEEEccCCCCCceeEEEEEEcCCC
Q psy7036 134 CRIQADPAPTVIWSHSGVQVKEDKRHKFSI------------DK--DGHS---YFASLEIIDVTIEDAGKYKVTAKNELG 196 (254)
Q Consensus 134 C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~------------~~--~~~~---~~~~l~i~~~~~~d~G~y~C~~~~~~~ 196 (254)
|.+.+.|.|.+.|++++..+.......... .. .... ....|.|.+++.+|+|.|+|.|.|..|
T Consensus 158 C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g 237 (250)
T 2fbo_J 158 CPCTDCANANVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCELATGQG 237 (250)
T ss_dssp CCEESCTTCEEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGGCEEEEEEEESSSS
T ss_pred EEecCCCCCeeEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcccCEEEEEEecCCcc
Confidence 999999999999999988765432111000 00 0000 013799999999999999999999766
Q ss_pred cc
Q psy7036 197 ES 198 (254)
Q Consensus 197 ~~ 198 (254)
..
T Consensus 238 ~~ 239 (250)
T 2fbo_J 238 EL 239 (250)
T ss_dssp GG
T ss_pred cc
Confidence 43
No 104
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.94 E-value=1.2e-26 Score=164.63 Aligned_cols=182 Identities=14% Similarity=0.299 Sum_probs=130.9
Q ss_pred CCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEee----------eCCcceEEEeecCCcceEEEEEEeccC
Q psy7036 8 APSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLS----------EDTRTVMKTTPIGTNKYLVALELDDVI 77 (254)
Q Consensus 8 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~l~i~~~~ 77 (254)
++.|...+....+.+|+++.|.|.+.+.|.+.+.|++++..+. .....++.... ..|.|.+++
T Consensus 4 ~~~i~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-------~~L~i~~~~ 76 (209)
T 1nbq_A 4 SVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLP-------TGITFKSVT 76 (209)
T ss_dssp CCEEECSCSBCCEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEET-------TEEECSCCC
T ss_pred eEEEEcCCCceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEeec-------cEEEEeeCC
Confidence 4567778888899999999999999988899999999765421 11111111111 279999999
Q ss_pred CCCCeEEEEEEEcCCCc--eEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEE-eeCCCCeEEEEECCEecc
Q psy7036 78 ETDAGLYKVKAKNKMGE--VAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRI-QADPAPTVIWSHSGVQVK 154 (254)
Q Consensus 78 ~~d~G~Y~C~~~~~~~~--~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~-~~~~~~~~~W~~~~~~~~ 154 (254)
..|+|.|+|.+.+..+. ....+.|.|. .+|..........+..|+.+.|.|.+ .+.|.+.+.|++++..+.
T Consensus 77 ~~d~G~Y~C~~~~~~g~~~~~~~~~l~V~------~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~ 150 (209)
T 1nbq_A 77 REDTGTYTCMVSEEGGNSYGEVKVKLIVL------VPPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMP 150 (209)
T ss_dssp TTSCSEEEEEEEETTSSCEECCEEECCEE------BCCCCCCCCCBSEEETTSCEEECCCCCSCBSCCEEEEEETTCCCC
T ss_pred HHHCcEEEEEEecCCCCccceEEEEEEEe------cCCcCCCcccccceecCCEEEEEEeCCCCCCCceeEEEECCeeCC
Confidence 99999999999987653 3345566665 23333333334567789999999996 889999999999998776
Q ss_pred cCCcc-------eEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcc--eEEEEEEE
Q psy7036 155 EDKRH-------KFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGES--NATISLNF 206 (254)
Q Consensus 155 ~~~~~-------~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~--~~~~~~~v 206 (254)
..... .+..... .+.|.|.++..+|.|.|+|.|.|..|.. ...+.|.|
T Consensus 151 ~~~~~~~~~~~~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~v~l~V 207 (209)
T 1nbq_A 151 TNPKSTRAFSNSSYVLNPT----TGELVFDPLSASDTGEYSCEARNGYGTPMTSNAVRMEA 207 (209)
T ss_dssp SCSSSSSSCTTCCCCCCTT----TCCEEESSCCGGGCCCEEEEEECSSSCCEECCCBCCEE
T ss_pred CccccceeeeccceEEcCC----cceEEEEeccccCCeEEEEEEeCCcCcccccccEEEEE
Confidence 54321 1111111 1379999999999999999999999987 33444443
No 105
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.94 E-value=4.6e-25 Score=157.99 Aligned_cols=187 Identities=15% Similarity=0.184 Sum_probs=122.3
Q ss_pred eCCCceeecCCCeEEEEEEEeeCC-----CCceEEEeCCEEeeeCC-------------cceEEEeecCCcceEEEEEEe
Q psy7036 13 QKPQLRQEDEGNRLIFECQLLCNP-----KPDIVWFRGETQLSEDT-------------RTVMKTTPIGTNKYLVALELD 74 (254)
Q Consensus 13 ~~~~~~~v~~g~~v~l~C~~~~~~-----~~~v~W~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~l~i~ 74 (254)
..++.+.+.+|++++|.|.+.+.| ...+.|+|++..+.... ..+.............+|.|.
T Consensus 6 ~p~~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~ 85 (222)
T 3sbw_C 6 VPKDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQIT 85 (222)
T ss_dssp CSCSEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEES
T ss_pred cCCccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEc
Confidence 345667889999999999987655 34899999875432110 111221111111234589999
Q ss_pred ccCCCCCeEEEEEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEEC-CEec
Q psy7036 75 DVIETDAGLYKVKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHS-GVQV 153 (254)
Q Consensus 75 ~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~-~~~~ 153 (254)
+++.+|+|.|+|.+.+ .+.....+.|.|.. ++..........+..|+.+.|.|.+.+.|.+.+.|+++ +..+
T Consensus 86 ~v~~~D~G~Y~C~~~~-~~~~~~~~~l~V~~------~~~~~~~~~~~~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~~ 158 (222)
T 3sbw_C 86 DVKLQDAGVYRCMISY-GGADYKRITVKVNA------PYNKINQRILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQVL 158 (222)
T ss_dssp SCCGGGCEEEEEEEES-SSEEEEEEEEEEEB------CCCCCEEEEEEEETTTTEEEEEEEEEEBSCCEEEEEETTCCEE
T ss_pred CcccccCeEEEEEEEe-CCCceeEEEEEEEC------CCCCCCceeeeeecCCCcEEEEEEecCCCCCeEEEEECCCcee
Confidence 9999999999999998 55666677788763 22211111112567899999999999999999999998 5554
Q ss_pred ccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEec
Q psy7036 154 KEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDS 208 (254)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~ 208 (254)
............++. + ....+..+..+|.|.|+|.|.|..|.......|.|..
T Consensus 159 ~~~~~~~~~~~~~~~-~-~~~~~l~v~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~ 211 (222)
T 3sbw_C 159 SGKTTTTNSKREEKL-F-NVTSTLRINTTTNEIFYCTFRRLDPEENHTAELVIPE 211 (222)
T ss_dssp CCEEEEEECC----C-E-EEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCC
T ss_pred cCccceEEEcCCCCC-E-EEEEEEEEeccCCcEEEEEEEeCccceeeEEEEEecC
Confidence 332211111112221 1 1222223456899999999999999998888888764
No 106
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.94 E-value=2.5e-25 Score=157.82 Aligned_cols=179 Identities=15% Similarity=0.239 Sum_probs=127.1
Q ss_pred eEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeC-----------------CcceEEEeecCCcceEEEEEE
Q psy7036 11 FTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSED-----------------TRTVMKTTPIGTNKYLVALEL 73 (254)
Q Consensus 11 ~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~l~i 73 (254)
+...+....+.+|++++|.|...+.+.+.+.||+++...... ...+.....+ .+|.|
T Consensus 2 ~~i~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~------~~L~i 75 (208)
T 3r4d_A 2 VTIEAVPPQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSN------GSLLF 75 (208)
T ss_dssp CEEEEESSEEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTT------SCEEE
T ss_pred ccccCccceeecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecC------CeEEE
Confidence 344555668899999999999877888899999975422110 0111111111 16999
Q ss_pred eccCCCCCeEEEEEEEcCC-CceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEe
Q psy7036 74 DDVIETDAGLYKVKAKNKM-GEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQ 152 (254)
Q Consensus 74 ~~~~~~d~G~Y~C~~~~~~-~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~ 152 (254)
.+++..|+|.|+|.+.+.. +.......|.|.... ..|.+...... +..|+.+.|.|.+.+.| +.+.|++++..
T Consensus 76 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~---~~p~i~~~~~~--~~~g~~v~l~C~~~~~p-p~i~W~~~g~~ 149 (208)
T 3r4d_A 76 QMITMKDMGVYTLDMTDENYRRTQATVRFHVHQPV---TQPFLQVTNTT--VKELDSVTLTCLSNDIG-ANIQWLFNSQS 149 (208)
T ss_dssp CSCCGGGCEEEEEEEECSSCEEEEEEEEEEEECCC---CCCEEEESCSS--CCTTCCEEEEEECSCTT-CEEEEEETTEE
T ss_pred ccccccCCeEEEEEEEcccCceeEEEEEEEeccCC---CCCEEecCCce--EeeCCCEEEEEECCCCC-CceEEEECCEe
Confidence 9999999999999999885 455666777775321 22333333332 77899999999998866 79999999998
Q ss_pred cccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcc-eEEEEEEEe
Q psy7036 153 VKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGES-NATISLNFD 207 (254)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~-~~~~~~~v~ 207 (254)
+.......+ ..++ ..|.|.++..+|.|.|+|.|.|..|.. +..+.|.|.
T Consensus 150 l~~~~~~~~--~~~~----~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v~ 199 (208)
T 3r4d_A 150 LQLTERMTL--SQNN----SILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDII 199 (208)
T ss_dssp CCCCSSEEE--ETTT----TEEEESSCCGGGCEEEEEEEECTTCCEECCCEEECCC
T ss_pred CCCCCCeEE--cCCC----CEEEEeccCHHhCeEEEEEEecCCCcccCCceeeeEE
Confidence 875554333 2222 279999999999999999999999976 345666554
No 107
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.94 E-value=4.7e-26 Score=172.99 Aligned_cols=186 Identities=24% Similarity=0.399 Sum_probs=137.0
Q ss_pred ceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEEEEEcCCCceE
Q psy7036 17 LRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKVKAKNKMGEVA 96 (254)
Q Consensus 17 ~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~ 96 (254)
...+.+|+++.|.|.+.+.|.+.+.|++++..+....+....... . ....|.|.+++..|+|.|+|.+.|..|...
T Consensus 132 ~~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~-~---~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~ 207 (334)
T 1ry7_B 132 LLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLR-H---QQWSLVMESVVPSDRGNYTCVVENKFGSIR 207 (334)
T ss_dssp EEEEETTCCEEEECCCCCSSCCEEECCBTTBCCCTTSSTTCCCCC-T---TTTEEEECSCCGGGCCCEEEEEEETTEEEE
T ss_pred eEEecCCCcEEEEEEccCCCCCeEEEEECCEECcccccccceecc-c---ceEEEEECCCCcccCEEEEEEEEeCCCCEE
Confidence 357889999999999999999999999999887654432111111 1 112799999999999999999999998888
Q ss_pred EEEEEEEeccccCCCCCcccc-CCCeeeecCCCeEEEEEEEeeCCCCeEEEEE----CCEecccCCcceEEEcCCC----
Q psy7036 97 ASINLNFSREQIDGLAPTFLK-KPSIRQEDDGKRLLFECRIQADPAPTVIWSH----SGVQVKEDKRHKFSIDKDG---- 167 (254)
Q Consensus 97 ~~~~l~v~~~~~~~~~~~~~~-~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~----~~~~~~~~~~~~~~~~~~~---- 167 (254)
..+.|.|..... .+|.+.. .+....+..|+.+.|.|.+.+.|.+.+.|++ ++..+..............
T Consensus 208 ~~~~l~V~~~~~--~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 285 (334)
T 1ry7_B 208 QTYTLDVLERSP--HRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANT 285 (334)
T ss_dssp EEEEEEEECCCC--SSCBCCTTCSCCEEEESSCCEEECCCCBCSSCEEEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSC
T ss_pred EEEEEEEecCCC--CCCceEecCCCceEEeCCCCEEEEEEEecCCCCeEEEEECCcCCCccccCCCCeeEEEeecCcccc
Confidence 888888864211 1232222 2345678889999999999999999999999 6666543332111111111
Q ss_pred -CceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEec
Q psy7036 168 -HSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDS 208 (254)
Q Consensus 168 -~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~ 208 (254)
....+.|.|.++..+|.|.|+|.|.|..|....++.|.|..
T Consensus 286 ~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 327 (334)
T 1ry7_B 286 TDKELEVLSLHNVTFEDAGEYTCLAGNSIGFSHHSAWLVVLP 327 (334)
T ss_dssp SCTTCCCEEECSCCTTSCSEEEEEEEESSCCEEEEEEEEEEC
T ss_pred ccccccEEEEccCCHHHCEEEEEEEeCCCCeEEEEEEEEEEE
Confidence 01123799999999999999999999999999999888875
No 108
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.94 E-value=1.7e-26 Score=162.36 Aligned_cols=175 Identities=14% Similarity=0.122 Sum_probs=113.4
Q ss_pred CCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEE
Q psy7036 7 FAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKV 86 (254)
Q Consensus 7 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 86 (254)
.+|.|...|.. .+.+|++|+|.|.+.+.+. .+.|+|++..+...... .........|.|.+++..|+|.|+|
T Consensus 4 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~------~~~~~~~~~L~i~~v~~~D~G~Y~C 75 (196)
T 2d3v_A 4 SKATLWAEPGS-VISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDTQN------PLEPKNKARFSIPSMTEHHAGRYRC 75 (196)
T ss_dssp CBCEEEEESCS-EEETTCCEEEEEECCTTCC-EEEEEETTCSSCSEEEC------CCSSTTEEEEEESSCCGGGCEEEEE
T ss_pred CCCEEEeCCCC-cccCCCeEEEEEeCCCCCc-EEEEEECCCCCCccccc------ccCCccccEEEeccCChhHCeEEEE
Confidence 57888888875 7899999999999987665 89999999865421110 0011223479999999999999999
Q ss_pred EEEcCCCce--EEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEc
Q psy7036 87 KAKNKMGEV--AASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSID 164 (254)
Q Consensus 87 ~~~~~~~~~--~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~ 164 (254)
.+.|..+.. ...+.|.|... ..+|.+...+ ...+.+|+.++|.|.+.+.| +.+.|+|++..+........ ..
T Consensus 76 ~a~n~~g~~~~s~~~~l~V~~~---~~~p~i~~~~-~~~v~~G~~v~L~C~~~~~p-~~~~W~k~g~~~~~~~~~~~-~~ 149 (196)
T 2d3v_A 76 YYYSPAGWSEPSDPLELVVTGF---YNKPTLSALP-SPVVTSGENVTLQCGSRLRF-DRFILTEEGDHKLSWTLDSQ-LT 149 (196)
T ss_dssp EEEETTEECBCCCCEEEEEECS---SCCCEEEC------------CEEEEEESSCC-SEEEEEEC---CCEEEEECE-EC
T ss_pred EEeCCCCcCCcCccEEEEecCC---CCCCeEEccC-CccccCCCcEEEEEEcCCCC-CEEEEEccCCcccccccccc-cc
Confidence 999876532 34566777531 1234433332 24677899999999998888 89999999987642211101 11
Q ss_pred CCCCceeeEEEEccCCCCCceeEEEEEEcCCC
Q psy7036 165 KDGHSYFASLEIIDVTIEDAGKYKVTAKNELG 196 (254)
Q Consensus 165 ~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~ 196 (254)
..+ .....|.|.+++.+|+|.|+|.|.|..+
T Consensus 150 ~~~-~~~~~L~I~~v~~~D~G~Y~C~a~n~~~ 180 (196)
T 2d3v_A 150 PSG-QFQALFPVGPVTPSHRWMLRCYGSRRHI 180 (196)
T ss_dssp TTS-CEEEEEECCCCBTTBCEEEEEEEEETTE
T ss_pred cCC-CceeEEEeeecCcccCeeEEEEEEccCC
Confidence 111 1123799999999999999999998754
No 109
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.94 E-value=1.9e-25 Score=168.00 Aligned_cols=188 Identities=17% Similarity=0.315 Sum_probs=135.3
Q ss_pred CCeeEeCCC-ceeecCCCeEEEEEEEe-eCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEE
Q psy7036 8 APSFTQKPQ-LRQEDEGNRLIFECQLL-CNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYK 85 (254)
Q Consensus 8 ~p~~~~~~~-~~~v~~g~~v~l~C~~~-~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 85 (254)
+|.+...+. ...+.+|+.+.|.|.+. +.|.+.+.|++++..+....++.+...... ....|.|.+++..|+|.|+
T Consensus 106 ~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~---~~~~L~i~~~~~~d~G~Y~ 182 (312)
T 2y23_A 106 FPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNT---GIIEMFMEKLQDEDEGTYT 182 (312)
T ss_dssp SCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSSSCEEEEETTT---TEEEEEESCCCGGGCEEEE
T ss_pred CCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCCcEEEEEccCC---CEEEEEEccCCcccCEeEE
Confidence 444443333 67889999999999998 789999999999999987766655443222 2347999999999999999
Q ss_pred EEEEcCCCceEEEEEEEEeccc---------------cCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCC-eEEEEEC
Q psy7036 86 VKAKNKMGEVAASINLNFSREQ---------------IDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAP-TVIWSHS 149 (254)
Q Consensus 86 C~~~~~~~~~~~~~~l~v~~~~---------------~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~-~~~W~~~ 149 (254)
|.+.+..... ...+.+.... ....+|.+... ....+..|+.+.|.|.+.+.|.+ .+.|+++
T Consensus 183 C~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~ 259 (312)
T 2y23_A 183 FQLQDGKATN--HSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEY-LSWEVTGECNVLLKCKVANIKKETHIVWYKD 259 (312)
T ss_dssp EEEESSSCEE--EEEEEECTHHHHHHHHHHHHHHHHHHHHHSSEEEEE-EEEEEETTTEEEEEEEEESCCSSCEEEEEET
T ss_pred EEEEeCCceE--EEEEEEcchhhhhhcccccccccchhhccCCceeec-ceEEEeCCCEEEEEEEEcCCCCCCEEEEeeC
Confidence 9998654433 3333331100 00012322211 12567799999999999999888 9999999
Q ss_pred CEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEe
Q psy7036 150 GVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFD 207 (254)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~ 207 (254)
+..+.......+. ++ ...|.|.++..+|+|.|+|.|.|..|....++.|.+.
T Consensus 260 g~~~~~~~~~~~~---~~---~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~i~ 311 (312)
T 2y23_A 260 EREISVDEKHDFK---DG---ICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDE 311 (312)
T ss_dssp TEEEEEECCC-------C---EEEEEECSCSGGGCEEEEEEEESTTCCEEEEEEECSC
T ss_pred CEECCCCCcEEEE---CC---EEEEEECcCCHHHCEEEEEEEEcCCCceeeeeEEEec
Confidence 9988654433322 11 2389999999999999999999999999888877653
No 110
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.94 E-value=1.2e-25 Score=154.45 Aligned_cols=163 Identities=15% Similarity=0.247 Sum_probs=122.9
Q ss_pred CCeeEeCCCceeecCCCeEEEEEEEeeCC-CCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEE
Q psy7036 8 APSFTQKPQLRQEDEGNRLIFECQLLCNP-KPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKV 86 (254)
Q Consensus 8 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~-~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 86 (254)
.|.+...|....+.+|+++.|.|.+.+.+ .+.+.|++++..+..... .+.+.+++..|+|.|+|
T Consensus 4 ~p~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~~~~---------------~~~~~~~~~~d~G~Y~C 68 (170)
T 3ry4_A 4 KAVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTHTQ---------------PSYRFKANNNDSGEYTC 68 (170)
T ss_dssp BCEEEEESCCSEEETTCEEEEEEESCCCSSSSCEEEEETTEECTTCCS---------------SEEEEECCGGGCEEEEE
T ss_pred CCEEEeCCCCeEEECCCcEEEEEEecCCCCcceEEEEECCeEcccCcc---------------ceEEEecccccCeEEEE
Confidence 56777888877899999999999998876 678999999998765422 36677899999999999
Q ss_pred EEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEe-eCCCCeEEEEECCEecccCCcceEEEcC
Q psy7036 87 KAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQ-ADPAPTVIWSHSGVQVKEDKRHKFSIDK 165 (254)
Q Consensus 87 ~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~~~~~~~~W~~~~~~~~~~~~~~~~~~~ 165 (254)
.+.+..... .+.|.|.. ++.... .....+.+|+.+.|.|.+. +.|.+.+.|++++..+.... .
T Consensus 69 ~~~~~~~s~--~~~l~v~~------~~~~~~-~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~-------~ 132 (170)
T 3ry4_A 69 QTGQTSLSD--PVHLTVLF------EWLVLQ-TPHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKFSH-------L 132 (170)
T ss_dssp EETTSBCCC--CEEEEEEC------CSEEEE-CSCSEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEEES-------S
T ss_pred EEeCCCceE--eEEEEEEC------CceEec-CCCceeecCCeEEEEEECCCCCCCceEEEEECCeEccccC-------C
Confidence 998755433 45666652 222222 2234577899999999994 45668999999988764211 1
Q ss_pred CCCceeeEEEEccCCCCCceeEEEEEEcCCCc-ceEEEEEEE
Q psy7036 166 DGHSYFASLEIIDVTIEDAGKYKVTAKNELGE-SNATISLNF 206 (254)
Q Consensus 166 ~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~-~~~~~~~~v 206 (254)
+ ..|.|.+++.+|.|.|+|.+.|..|. .+..+.|.|
T Consensus 133 ~-----~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V 169 (170)
T 3ry4_A 133 D-----PTFSIPQANHSHSGDYHCTGNIGYTLFSSKPVTITV 169 (170)
T ss_dssp C-----CEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred C-----CeEEEEeccccCCEEEEEEEEeCcCccccccEEEEE
Confidence 2 27999999999999999999999886 344555554
No 111
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.94 E-value=8.5e-25 Score=155.91 Aligned_cols=187 Identities=12% Similarity=0.183 Sum_probs=126.8
Q ss_pred eCCCceeecCCCeEEEEEEEeeCCCC---ceEEEeCCEEeeeC----------------CcceEEEeecCCcceEEEEEE
Q psy7036 13 QKPQLRQEDEGNRLIFECQLLCNPKP---DIVWFRGETQLSED----------------TRTVMKTTPIGTNKYLVALEL 73 (254)
Q Consensus 13 ~~~~~~~v~~g~~v~l~C~~~~~~~~---~v~W~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~l~i 73 (254)
..|+.+.+.+|++++|.|.+.+.+.+ .|+|+|++..+... ...++...........++|.|
T Consensus 4 ~~p~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I 83 (218)
T 4frw_A 4 ETSDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLL 83 (218)
T ss_dssp ECCSEEEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEE
T ss_pred eCCCeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEE
Confidence 45677889999999999999887654 48999976432111 011111111112222347999
Q ss_pred eccCCCCCeEEEEEEEcCCCceEE-EEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEe
Q psy7036 74 DDVIETDAGLYKVKAKNKMGEVAA-SINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQ 152 (254)
Q Consensus 74 ~~~~~~d~G~Y~C~~~~~~~~~~~-~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~ 152 (254)
.+++..|+|.|.|.+.+..+.... ...+.+.. .++..........+..|..+.+.|.+.+.|.|.+.|++++..
T Consensus 84 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~c~~~g~p~p~i~W~~~~~~ 158 (218)
T 4frw_A 84 RNAVQADEGEYECRVSTFPAGSFQARLRLRVLV-----PPLPSLNPGPALEEGQGLTLAASCTAEGSPAPSVTWDTEVKG 158 (218)
T ss_dssp SSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEB-----CCCCEEEECSCEETTCCSEEEEEEEEEEBSCCEEEEEESSCC
T ss_pred eeccHHHCCceeEEEEeccCceeeeEEEEEEee-----eccceeeeeeeeeeeeccccceeeeccCCcCceEEEEECCcc
Confidence 999999999999999876654333 33333331 222223333445667889999999999999999999999876
Q ss_pred cccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEe
Q psy7036 153 VKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFD 207 (254)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~ 207 (254)
+..... . .........+.|.|.++..+|.|.|+|.|.|+.|.....+.+.|.
T Consensus 159 ~~~~~~--~-~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~v~ 210 (218)
T 4frw_A 159 TTSSRS--F-KHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHILH 210 (218)
T ss_dssp EEEEEE--E-ECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECC
T ss_pred cccCce--E-ecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEEEE
Confidence 643321 1 112222334689999999999999999999999987666655554
No 112
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.94 E-value=6.8e-26 Score=159.52 Aligned_cols=175 Identities=15% Similarity=0.163 Sum_probs=117.4
Q ss_pred CCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEE
Q psy7036 7 FAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKV 86 (254)
Q Consensus 7 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 86 (254)
.+|.|...|.. .+.+|++++|.|.+.+.+. .+.|+|++..+........ ..... ..|.|.+++..|+|.|+|
T Consensus 4 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~-~~~~~-----~~L~i~~v~~~D~G~Y~C 75 (198)
T 1ugn_A 4 PKPTLWAEPGS-VITQGSPVTLRCQGGQETQ-EYRLYREKKTAPWITRIPQ-ELVKK-----GQFPIPSITWEHTGRYRC 75 (198)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCTTCC-CEEEEESSSCCHHHHTSCH-HHHTT-----TEEEESSCCGGGCEEEEE
T ss_pred CCCeEeccCCC-cccCCCcEEEEEEecCCCc-EEEEEECCccccccccccc-cCCcc-----cEEEECCCCHHHCeEEEE
Confidence 57888888874 7899999999999987665 6999999987642111100 00011 179999999999999999
Q ss_pred EEEcCC-C--ceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEE
Q psy7036 87 KAKNKM-G--EVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSI 163 (254)
Q Consensus 87 ~~~~~~-~--~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~ 163 (254)
.+.|.. + .....+.|.|... ..+|.+...+ ...+.+|+.+.|.|.+.+. .+.+.|+|++..+..... ....
T Consensus 76 ~a~n~~~g~~~~s~~~~l~V~~~---~~~p~i~~~~-~~~v~~G~~v~L~C~~~~~-~~~v~W~k~g~~~~~~~~-~~~~ 149 (198)
T 1ugn_A 76 YYGSDTAGRSESSDPLELVVTGA---YIKPTLSAQP-SPVVNSGGNVTLQCDSQVA-FDGFILCKEGEDEHPQCL-NSQP 149 (198)
T ss_dssp EEEETTTEECCCCCCEEEEEECS---SCCCEEEEES-CSEEETTCCEEEEEECSSC-CSEEEEEEC------CEE-EC--
T ss_pred EEECCCCCcccCCccEEEEEccc---ccCCccccCC-ccccCCCCcEEEEEecCCC-CcEEEEEECCCccCCccc-cccc
Confidence 999876 4 3345566777531 1123333222 2467789999999999888 779999999987642211 1111
Q ss_pred cCCCCceeeEEEEccCCCCCceeEEEEEEcCCC
Q psy7036 164 DKDGHSYFASLEIIDVTIEDAGKYKVTAKNELG 196 (254)
Q Consensus 164 ~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~ 196 (254)
..++ .....|.|.+++.+|.|.|+|.|.|..+
T Consensus 150 ~~~~-~~~~~L~i~~v~~~D~G~Y~C~a~n~~~ 181 (198)
T 1ugn_A 150 HARG-SSRAIFSVGPVSPSRRWWYRCYAYDSNS 181 (198)
T ss_dssp -----CCEEEEEECCCCTTSCEEEEEEEECTTS
T ss_pred cCCC-cceeEEEecccCcccCeEEEEEEEeCCC
Confidence 1111 0123799999999999999999999865
No 113
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.94 E-value=1.9e-26 Score=193.32 Aligned_cols=219 Identities=21% Similarity=0.373 Sum_probs=65.6
Q ss_pred CeeEeCC-CceeecCCCeEEEEEEEee--CCCCceEEEeCCEEeeeCCcceEEEeec---CCcceEEEEEEeccCCCCCe
Q psy7036 9 PSFTQKP-QLRQEDEGNRLIFECQLLC--NPKPDIVWFRGETQLSEDTRTVMKTTPI---GTNKYLVALELDDVIETDAG 82 (254)
Q Consensus 9 p~~~~~~-~~~~v~~g~~v~l~C~~~~--~~~~~v~W~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~i~~~~~~d~G 82 (254)
|.+...+ ....+.+|++++|.|.+.+ .+.+.+.|++++..+............. ......+.|.|.+++..|+|
T Consensus 224 ~~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G 303 (772)
T 3v2a_R 224 YDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQG 303 (772)
T ss_dssp EEEEEECCSCEEEETTCCEEEEEEEEECTTCCCEEEEECC--------CEEEEC-----CCCEEEEEEEEESSCCSTTCS
T ss_pred ceeeeCCCCceEEecCCcEEEEEEEecCCCCceeEEEecCCccCCCceeeeccccccccccceEEEEEEEECcCCcCCCe
Confidence 3444444 3468899999999999987 4567899999988764432221110000 22234558999999999999
Q ss_pred EEEEEEEcCCCceEEEEEEEEeccccCCCCCcccc---CCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcc
Q psy7036 83 LYKVKAKNKMGEVAASINLNFSREQIDGLAPTFLK---KPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRH 159 (254)
Q Consensus 83 ~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~---~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~ 159 (254)
.|+|.+.|..+.....+.|.|.. +|.+.. ......+..|+.+.|.|.+.+.|.+.+.|++++..+.....
T Consensus 304 ~Y~C~~~~~~~~~~~~~~l~V~~------~p~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~g~~l~~~~~- 376 (772)
T 3v2a_R 304 LYTCAASSGLMTKKNSTFVRVHE------KPFVAFGSGMESLVEATVGERVRIPAKYLGYPPPEIKWYKNGIPLESNHT- 376 (772)
T ss_dssp EEEEEEECSSCEEEEEEEEEEEC------CCC------------------------------------------------
T ss_pred EEEEEEEcCCcceeEEEEEEEeC------CCeeEeccCCCCcEEEcCCCcEEEEEEEeeeCCCeEEEEECCEeCCCCce-
Confidence 99999999888877788888864 332221 12345677899999999999999999999999987754221
Q ss_pred eEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceE--EEEEEEecCCCCCCCCCCCCeeecC----CccccccC
Q psy7036 160 KFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNA--TISLNFDSDDAPVPGEGTKPVFTER----PVTKQSDD 233 (254)
Q Consensus 160 ~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~p~~~~~----~~~~~~~~ 233 (254)
+ ..+ ..|.|.++..+|.|.|+|.|.|..|.... .+.+.|.. +|.+... +. ..+.+
T Consensus 377 -~--~~~-----~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~s~~~~l~v~~----------~P~~~~~~~~~~~-~~~~~ 437 (772)
T 3v2a_R 377 -I--KAG-----HVLTIMEVSERDTGNYTVILTNPISKEKQSHVVSLVVYV----------PPQIGEKSLISPV-DSYQY 437 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -E--ccc-----eeEEEecCChhcCceEEEEEEECCcCeEEEEEEEEEEec----------CCcccccccCCCc-cccCC
Confidence 1 111 27999999999999999999999886543 44444442 3333221 21 13678
Q ss_pred CCCcEEEEEEEeccCCCc-eeC
Q psy7036 234 DLNDIVIECRLVGEPEPT-ISW 254 (254)
Q Consensus 234 g~~~~~l~C~~~~~p~p~-~~W 254 (254)
|+ .+.|.|.+.|.|.|. ++|
T Consensus 438 g~-~~~l~C~~~g~p~p~~v~W 458 (772)
T 3v2a_R 438 GT-TQTLTCTVYAIPPPHHIHW 458 (772)
T ss_dssp ----------------------
T ss_pred CC-cEEEEeEeccCCCCcEEEE
Confidence 88 999999999999996 988
No 114
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.94 E-value=7e-25 Score=163.21 Aligned_cols=185 Identities=19% Similarity=0.250 Sum_probs=138.4
Q ss_pred eEeCCCceeecCCCeEEEEEEEeeCCCCc-eEEEe-CCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEEEE
Q psy7036 11 FTQKPQLRQEDEGNRLIFECQLLCNPKPD-IVWFR-GETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKVKA 88 (254)
Q Consensus 11 ~~~~~~~~~v~~g~~v~l~C~~~~~~~~~-v~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 88 (254)
+...+....+.+|+++.|.|.+.+.+.+. +.|++ ++..+....+..+ ...+ .|.|.+++..|+|.|+|.+
T Consensus 92 ~~~~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~--~~~~------~L~i~~v~~~d~G~Y~C~a 163 (289)
T 3ejj_X 92 WNLLAQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRKTVYFF--SPWR------GFIIRKAKVLDSNTYVCKT 163 (289)
T ss_dssp EEESCSEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCTTCCEEE--ETTT------EEEESSCCGGGCEEEEEEE
T ss_pred eecccceEEEecCCceEeEEEccCCCcceEEEEEecCCeecCCCccEEE--CCCC------CEEEeecccccCEEEEEEE
Confidence 66777888899999999999998766655 99986 6666654444332 2222 6999999999999999999
Q ss_pred E-cCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEee-CCCCeEEEEECCEecccCCcceEEEcCC
Q psy7036 89 K-NKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQA-DPAPTVIWSHSGVQVKEDKRHKFSIDKD 166 (254)
Q Consensus 89 ~-~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~~~~W~~~~~~~~~~~~~~~~~~~~ 166 (254)
. +..+.....+.|.|... ...+|.+...+....+..|+.+.|.|.+.+ .|.+.+.|++++..+....... ....
T Consensus 164 ~~~~~~~~~~~~~l~V~~~--~~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~--~~~~ 239 (289)
T 3ejj_X 164 MVNGRESTSTGIWLKVNRV--HPEPPQIKLEPSKLVRIRGEAAQIVCSATNAEVGFNVILKRGDTKLEIPLNSD--FQDN 239 (289)
T ss_dssp EETTEEEECCCEEEEEESS--CCCCCEEEEESSSEECCSSSCEEEEEEEEESSSCCEEEEEETTEECCCCEEEE--ECSS
T ss_pred EeCCCccccccEEEEEEEC--CCCCCeEEecCCceEEEeCCcEEEEEEeCCCCCceEEEEEECCEEeeccCCcc--cccc
Confidence 9 44445556677777531 113555555555566678999999999998 7889999999998875432211 1122
Q ss_pred CCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEe
Q psy7036 167 GHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFD 207 (254)
Q Consensus 167 ~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~ 207 (254)
.....+.|.|.+++.+|.|.|+|.|.|..|....++.|.+.
T Consensus 240 ~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~s~~L~~~ 280 (289)
T 3ejj_X 240 YYKKVRALSLNAVDFQDAGIYSCVASNDVGTRTATMNFQVV 280 (289)
T ss_dssp SEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEEECC
T ss_pred eEEeeEEEEEEeecccCCEEEEEEEEcCCCCccccEEEEEE
Confidence 22234589999999999999999999999999999888765
No 115
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.93 E-value=1.3e-25 Score=159.81 Aligned_cols=186 Identities=12% Similarity=0.166 Sum_probs=126.0
Q ss_pred CeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeC--CEE---ee---------eCCcceEEEeecCCcceEEEEEEe
Q psy7036 9 PSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRG--ETQ---LS---------EDTRTVMKTTPIGTNKYLVALELD 74 (254)
Q Consensus 9 p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~--~~~---~~---------~~~~~~~~~~~~~~~~~~~~l~i~ 74 (254)
|.+.+.| ...+.+|++++|.|.+.+.+.+.+.|+|. +.. +. ...++.... ......|.|.
T Consensus 2 ~~v~~~~-~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-----~~~~~~L~I~ 75 (213)
T 3mj8_L 2 YTLTQPP-LVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSN-----SGNMATLTIS 75 (213)
T ss_dssp CCBBCCS-EEEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEE-----ETTEEEEEES
T ss_pred eeEEeCC-cEEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEe-----cCCEEEEEEC
Confidence 4566667 78899999999999999889999999982 211 11 111222211 1223479999
Q ss_pred ccCCCCCeEEEEEEEcCCC---ceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeC-CC-CeEEEEEC
Q psy7036 75 DVIETDAGLYKVKAKNKMG---EVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQAD-PA-PTVIWSHS 149 (254)
Q Consensus 75 ~~~~~d~G~Y~C~~~~~~~---~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~-~~~~W~~~ 149 (254)
+++.+|+|.|+|.+.+..+ .......|.|... ...+|.+...+....+..|+.+.|.|.+.+. |+ +.+.|+++
T Consensus 76 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~--~~~~P~i~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~ 153 (213)
T 3mj8_L 76 KAQAGDEADYYCQSWDGTNSAWVFGSGTKVTVLGQ--PNAAPSVTLFPPSSEELKTNQATLVCMINGFYPADVAVTWEAD 153 (213)
T ss_dssp SCCGGGCEEEEEEEEETTTTEEEEBCCEEEEEECS--CCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEET
T ss_pred CCChhhCEEEEEEeccCCcceeEEcCceEEEEeCC--CCCCCeEEccCCCcccccCCcEEEEEEeeceeCCCeEEEEEcC
Confidence 9999999999999999877 3344566777531 1134444433333334479999999999885 33 48999999
Q ss_pred CEecccCCcce-EEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEE
Q psy7036 150 GVQVKEDKRHK-FSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATI 202 (254)
Q Consensus 150 ~~~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~ 202 (254)
+..+....... ...........+.|.|.++..+|.|.|+|.|.|..+....++
T Consensus 154 g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~ 207 (213)
T 3mj8_L 154 GTPITQGVKTTQPSKSDSKYMATSYLTMTADAWKSRNTFICKVTHGGNTVEKSL 207 (213)
T ss_dssp TEEECTTEEECCCEEETTEEEEEEEEEEESHHHHSCSCEEEEEEETTEEEEEEE
T ss_pred CcccCCCcccCCcCccCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCccEEeee
Confidence 99886432111 111111122335799999999999999999999876555444
No 116
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.93 E-value=2.7e-24 Score=162.04 Aligned_cols=181 Identities=18% Similarity=0.273 Sum_probs=133.5
Q ss_pred eeecCCCeEEEEEEE------eeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEEEEE-c
Q psy7036 18 RQEDEGNRLIFECQL------LCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKVKAK-N 90 (254)
Q Consensus 18 ~~v~~g~~v~l~C~~------~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~-~ 90 (254)
..+.+|+++.|.|.+ .+.|.+.++|++++..+..... +... ..+ .|.|.+++..|+|.|+|.+. |
T Consensus 113 ~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~~-~~~~-~~~------~L~i~~v~~~d~G~Y~C~a~~n 184 (315)
T 1itb_B 113 QKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNI-HFSG-VKD------RLIVMNVAEKHRGNYTCHASYT 184 (315)
T ss_dssp EEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCSS-SEEE-ETT------EEEESSCCGGGCEEEEEEEEEE
T ss_pred eEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCccc-eEee-cCc------eEEEEeceehhCcEEEEEEEcC
Confidence 467899999999998 7788999999999999865332 2221 111 79999999999999999999 7
Q ss_pred CCCce---EEEEEEEEeccccCCCCCccccCCCe-eeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcce----EE
Q psy7036 91 KMGEV---AASINLNFSREQIDGLAPTFLKKPSI-RQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHK----FS 162 (254)
Q Consensus 91 ~~~~~---~~~~~l~v~~~~~~~~~~~~~~~~~~-~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~----~~ 162 (254)
..|.. ...+.+.+... ....+|.+...+.. ..+..|+.+.|.|.+.+.|.+.+.|++++..+....... ..
T Consensus 185 ~~g~~~~~~~~~~~~~~~~-~~~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~i~~~~~~~~~~~~~ 263 (315)
T 1itb_B 185 YLGKQYPITRVIEFITLEE-NKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYS 263 (315)
T ss_dssp ETTEEEEEEEEEEEEEECC-CCCCCCEECSCCSEEEECCSSSCEEEEEEEEECTTSEEEEEETTEECCTTCSSEEEEEEE
T ss_pred CCCcEEEEEEEEEEEEecC-CCCCCCEEecCCCCcEEEeCCCcEEEEEEEecCCCCeeEEEECCEECCccccccccccee
Confidence 77765 23334433321 11245555544443 467899999999999999999999999999887654311 11
Q ss_pred EcCC--C--CceeeEEEEccCCCCC-ceeEEEEEEcCCCcceEEEEEEEe
Q psy7036 163 IDKD--G--HSYFASLEIIDVTIED-AGKYKVTAKNELGESNATISLNFD 207 (254)
Q Consensus 163 ~~~~--~--~~~~~~l~i~~~~~~d-~G~y~C~~~~~~~~~~~~~~~~v~ 207 (254)
.... . ....+.|.|.+++.+| .|.|+|.|.|..|....++.|.|.
T Consensus 264 ~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~ 313 (315)
T 1itb_B 264 VENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYP 313 (315)
T ss_dssp ECCSSCGGGEEEEEEEEESSCCGGGGTSCEEEEEECTTCCEEEEEEEECC
T ss_pred eeccCCCceeEEEEEEEEeecCHHHcCCceEEEEecCCCceeEEEEEEec
Confidence 1111 0 1234589999999999 999999999999999988888765
No 117
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.93 E-value=1.4e-25 Score=177.39 Aligned_cols=238 Identities=12% Similarity=0.158 Sum_probs=141.0
Q ss_pred CCeeEeCCCceeecCCCeEEEEEEEeeC-CC-CceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEE
Q psy7036 8 APSFTQKPQLRQEDEGNRLIFECQLLCN-PK-PDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYK 85 (254)
Q Consensus 8 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~-~~-~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 85 (254)
+|.+...+....+.+|+.++|.|.+.+. |. +.++|++++..+... ........++.....+.|.|.++..+| |.|+
T Consensus 132 ~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~~~~~~~~-~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~ 209 (457)
T 1hzh_H 132 GPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVH-TFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYI 209 (457)
T ss_dssp CCEEEEECCCSCCCTTCCEEEEEEEESBBSCCCEEEETTTTBCTTEE-EEEEEECTTSCEEEEEEEEECSGGGGT-SCCE
T ss_pred CCeEEecCccccccCCCcEEEEEEEeEEeCCCeEEEEEeCCEeccce-EcCceECCCCCEEEEEEEEecccccCC-ceEE
Confidence 4555444433456799999999999875 64 789999998643211 010111111222234479999999999 9999
Q ss_pred EEEEcCCCceEEEEEEEEecccc-----------CCCCCcc-ccCCCeee-ecCCCeEEEEEEEeeCCCC----eEEEEE
Q psy7036 86 VKAKNKMGEVAASINLNFSREQI-----------DGLAPTF-LKKPSIRQ-EDDGKRLLFECRIQADPAP----TVIWSH 148 (254)
Q Consensus 86 C~~~~~~~~~~~~~~l~v~~~~~-----------~~~~~~~-~~~~~~~~-~~~g~~~~l~C~~~~~~~~----~~~W~~ 148 (254)
|.+.|..+.......+.+..... ...+|.+ ...+.... +..|+.+.|.|.+.+.+++ .+.|+|
T Consensus 210 C~a~n~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~v~L~C~~~g~~p~p~~~~i~W~k 289 (457)
T 1hzh_H 210 CNVNHKPSNTKVDKKAEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYV 289 (457)
T ss_dssp EEEEEGGGTEEEEEECCCCCSCSSCSCCSCCCCCCSSSCEEEEECCCHHHHHCTTSCCCEEEEEECCCTTCCCCEEEEEE
T ss_pred EEEEeCCCCcceeEEecccCCCcccccCCCCCccccCCceEEeECcCchhhcccCCceEEEEEEEcccCCCCceEEEEEe
Confidence 99999877654444444321100 0012332 22222222 5679999999999987553 899999
Q ss_pred CCEecccCCcceEEEcCCCC-ceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEecCCCCCCCCCCCCeeecCCc
Q psy7036 149 SGVQVKEDKRHKFSIDKDGH-SYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDSDDAPVPGEGTKPVFTERPV 227 (254)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~ 227 (254)
++..+............++. ...+.|.|.....+|.|.|+|.|.|..+.......+.+.. ....+|.+...+.
T Consensus 290 ~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~G~Y~C~a~n~~~~~~~~~~v~~~~------~~~~~P~v~~~~~ 363 (457)
T 1hzh_H 290 DGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK------GQPREPQVYTLPP 363 (457)
T ss_dssp TTEEECCCEEEEEEECTTSCEEEEEEECCCHHHHHHTCCEEEEEECTTSSSCEEEEECCCC------CCCBCCEEEEECC
T ss_pred CCccccccccccceecCCCcEEEEEEEEECHHHccCCCcEEEEEeCCCCCCcceEEEEccc------CCCCCCeEEEECC
Confidence 99887533222222222332 1122333333333449999999998766554444443211 0123566655443
Q ss_pred cccccCCCCcEEEEEEEeccCCC--ceeC
Q psy7036 228 TKQSDDDLNDIVIECRLVGEPEP--TISW 254 (254)
Q Consensus 228 ~~~~~~g~~~~~l~C~~~~~p~p--~~~W 254 (254)
......++ .+.|.|.+.|.|+| .++|
T Consensus 364 ~~~~~~~~-~~~l~C~~~g~~p~~~~v~W 391 (457)
T 1hzh_H 364 SRDELTKN-QVSLTCLVKGFYPSDIAVEW 391 (457)
T ss_dssp CGGGGGSS-EEEEEEEEEEEBSSCCEEEE
T ss_pred CccccCCC-cEEEEEEEEeEECCCCEEEE
Confidence 33345677 69999999997554 7888
No 118
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.93 E-value=3.9e-25 Score=157.39 Aligned_cols=176 Identities=17% Similarity=0.221 Sum_probs=122.1
Q ss_pred CeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCC--E---Eeee---------CCcceEEEeecCCcceEEEEEEe
Q psy7036 9 PSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGE--T---QLSE---------DTRTVMKTTPIGTNKYLVALELD 74 (254)
Q Consensus 9 p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~--~---~~~~---------~~~~~~~~~~~~~~~~~~~l~i~ 74 (254)
|.+++.|....+.+|++++|.|.+.+.+.+.+.|||++ . .+.. ..++... . ....+.|.|.
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~--~---~~~~~~L~I~ 76 (213)
T 3nl4_L 2 VVMTQTPASVSEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGS--G---SGTDFTLTIS 76 (213)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEE--E---ETTEEEEEEC
T ss_pred ccEEeCCCeEEEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEe--c---CCCEEEEEEC
Confidence 56778888899999999999999998889999999842 1 1111 1222222 1 1223479999
Q ss_pred ccCCCCCeEEEEEEEcCCCc---eEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEee-CCCCeEEEEECC
Q psy7036 75 DVIETDAGLYKVKAKNKMGE---VAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQA-DPAPTVIWSHSG 150 (254)
Q Consensus 75 ~~~~~d~G~Y~C~~~~~~~~---~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~~~~W~~~~ 150 (254)
+++.+|+|.|+|.+.+..+. ......|.|.. ...+|.+........+..|+.+.|.|.+.+ .|.+.+.|++++
T Consensus 77 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~---~~~~p~v~~~~~~~~~~~g~~v~l~C~~~g~~P~~~v~W~k~g 153 (213)
T 3nl4_L 77 DLECADAATYYCQSTYENPTYVSFGGGTEVGVKG---DPVAPTVLIFPPSADLVATGTVTIVCVANKYFPDVTVTWEVDG 153 (213)
T ss_dssp SCCGGGCEEEEEEECCSSTTTCEECCCEEEEEEC---CCBCCEEEEECCCHHHHTTSEEEEEEEEEEEBSCCEEEEEETT
T ss_pred CCChHHCEEEEEecCCCCceeEEeCCCeEEEEeC---CCcCCeEEEeCCchhhccCCcEeEEEEEecccCCcEEEEEeCC
Confidence 99999999999999987662 23345566642 123444433333334557999999999998 888999999999
Q ss_pred EecccCCcceE--EEcCCC-CceeeEEEEccCCCCCceeEEEEEE
Q psy7036 151 VQVKEDKRHKF--SIDKDG-HSYFASLEIIDVTIEDAGKYKVTAK 192 (254)
Q Consensus 151 ~~~~~~~~~~~--~~~~~~-~~~~~~l~i~~~~~~d~G~y~C~~~ 192 (254)
..+........ ....++ +...+.|.|..+..+|.|.|+|.|.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 154 TTQTTGIENSKTPQNSADCTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp EECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred ccCCCCeecccCcccCCCCeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 88754320111 111111 1233679999999999999999999
No 119
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.93 E-value=8.3e-25 Score=172.35 Aligned_cols=234 Identities=15% Similarity=0.227 Sum_probs=145.0
Q ss_pred eCCCceeecCCCeEEEEEEEeeCC--CCceEEEeCC--EEe----e-------------eCCcceEEEeecCCcceEEEE
Q psy7036 13 QKPQLRQEDEGNRLIFECQLLCNP--KPDIVWFRGE--TQL----S-------------EDTRTVMKTTPIGTNKYLVAL 71 (254)
Q Consensus 13 ~~~~~~~v~~g~~v~l~C~~~~~~--~~~v~W~~~~--~~~----~-------------~~~~~~~~~~~~~~~~~~~~l 71 (254)
..|....+.+|++++|.|.+.+.+ .+.+.|||++ ..+ . ...++.+... . ....+.|
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~--~-~~~~~~L 81 (444)
T 1igt_B 5 QESGGGLVQPGGSLKLSCATSGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRD--N-AKNTLYL 81 (444)
T ss_dssp EEECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTSSCEECCGGGTTTEEEEEE--T-TTTEEEE
T ss_pred ecCCCeEEcCCCCEEEEEEcCCCccCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEe--C-CCCeEEE
Confidence 345567899999999999998754 5789999852 211 1 0112222211 1 1234589
Q ss_pred EEeccCCCCCeEEEEEEEcCCCc---eEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeC-CCC-eEEE
Q psy7036 72 ELDDVIETDAGLYKVKAKNKMGE---VAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQAD-PAP-TVIW 146 (254)
Q Consensus 72 ~i~~~~~~d~G~Y~C~~~~~~~~---~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~-~~~W 146 (254)
.|.+++.+|+|.|+|.+.+..+. ......|.|... ...+|.+........+..|+.+.|.|.+.+. |.+ .+.|
T Consensus 82 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~--~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W 159 (444)
T 1igt_B 82 QMSRLKSEDTAMYYCARHGGYYAMDYWGQGTTVTVSSA--KTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTW 159 (444)
T ss_dssp EECSCCGGGCEEEEEEEECSSSCEEEEBCCEEEEECSC--CCBCCEEEEECCCSSCCCSSCEEEEEEEEEEBSSCCEEEE
T ss_pred EECCCCHHHCEEEEEEEecCCcccccccCcEEEEecCC--CCCCCceeEecccccCCCCCcEEEEEEEcceeCCCcEEEE
Confidence 99999999999999999987543 122356666521 1123333221222234689999999999885 766 8999
Q ss_pred EECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEecC--------CCCCCCCCC
Q psy7036 147 SHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDSD--------DAPVPGEGT 218 (254)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~~--------~~~~~~~~~ 218 (254)
++++..+......... ....+...+.|.|.+...+| |.|+|.|.|..+.......+.+... ..+......
T Consensus 160 ~~~~~~~~~~~~~~~~-~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 237 (444)
T 1igt_B 160 NSGSLSSGVHTFPAVL-QSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRGPTIKPCPPCKCPAPNLLG 237 (444)
T ss_dssp GGGTBCTTEEECCCEE-ETTEEEEEEEEEECSTTTTT-SCCEEEEEETTTTEEEEEECCCCCCSCCCCCCCSCCCSCCCC
T ss_pred ecCCCCCCeEecCccc-cCCcEEEEEEEEEchhhcCC-CeEEEEEEeCCCCcceEEEeccCCCCcccCCccccCCcccCC
Confidence 9998763211111111 11112223579999999889 9999999999887655554433210 000001112
Q ss_pred CCee-ecCCcccc-ccCCCCcEEEEEEEeccC---C-CceeC
Q psy7036 219 KPVF-TERPVTKQ-SDDDLNDIVIECRLVGEP---E-PTISW 254 (254)
Q Consensus 219 ~p~~-~~~~~~~~-~~~g~~~~~l~C~~~~~p---~-p~~~W 254 (254)
+|.+ ...|.... +.+|+ .+.|.|.+.|.| + +.++|
T Consensus 238 ~p~v~~~~p~~~~~~~~G~-~~~L~C~~~g~~~~p~~~~v~W 278 (444)
T 1igt_B 238 GPSVFIFPPKIKDVLMISL-SPIVTCVVVDVSEDDPDVQISW 278 (444)
T ss_dssp CCEEEEECCCHHHHHCTTS-CCEEEEEEEEECTTCCCCEEEE
T ss_pred CceEEecCCchhheeecCC-CcEEEEEEeecccCCCCeEEEE
Confidence 4554 44444333 57898 999999999984 3 57888
No 120
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.93 E-value=4.3e-25 Score=157.21 Aligned_cols=190 Identities=18% Similarity=0.239 Sum_probs=125.8
Q ss_pred eeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCC--EEe----------eeCCcceEEEeecCCcceEEEEEEeccC
Q psy7036 10 SFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGE--TQL----------SEDTRTVMKTTPIGTNKYLVALELDDVI 77 (254)
Q Consensus 10 ~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~--~~~----------~~~~~~~~~~~~~~~~~~~~~l~i~~~~ 77 (254)
.+++.|....+.+|++++|.|.+.+.+.+.+.|+|++ ..+ ......++.... ......|.|.+++
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~---~~~~~~L~I~~v~ 79 (213)
T 3d9a_L 3 VLTQSPATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSG---SGTDFTLSINSVE 79 (213)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE---ETTEEEEEESSCC
T ss_pred eEEeCCccEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEc---CCCEEEEEECCCC
Confidence 3566688889999999999999998888899999843 111 011111222111 1123489999999
Q ss_pred CCCCeEEEEEEEcCCCceE-EEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEee-CCCC-eEEEEECCEecc
Q psy7036 78 ETDAGLYKVKAKNKMGEVA-ASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQA-DPAP-TVIWSHSGVQVK 154 (254)
Q Consensus 78 ~~d~G~Y~C~~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~-~~~W~~~~~~~~ 154 (254)
.+|+|.|+|.+.+..+... ....|.|... ..+|.+...........|+.+.|.|.+.+ .|.+ .+.|++++..+.
T Consensus 80 ~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~---~~~p~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~ 156 (213)
T 3d9a_L 80 TEDFGMYFCQQSNSWPYTFGGGTKLEIKRA---DAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQ 156 (213)
T ss_dssp GGGCEEEEEEECSSSSCEECCCEEEEECCC---CBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEEC
T ss_pred hhhCEEEEEeeecCCcceeCCCEEEEEecC---CCCceeEeECCChhhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCc
Confidence 9999999999998776432 2345666421 12444433222222336889999999987 5555 899999999876
Q ss_pred cC-Cc-ceEEEcCCC-CceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEE
Q psy7036 155 ED-KR-HKFSIDKDG-HSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLN 205 (254)
Q Consensus 155 ~~-~~-~~~~~~~~~-~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~ 205 (254)
.. .. .......++ +...+.|.|.++..+|.|.|+|.|.|..........+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~i~ 210 (213)
T 3d9a_L 157 NGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFN 210 (213)
T ss_dssp TTEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSSCEEEEEE
T ss_pred ceeeecCCCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCCCceEEEec
Confidence 54 11 111111222 12346899999999999999999999877665554443
No 121
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.93 E-value=5.7e-25 Score=152.93 Aligned_cols=160 Identities=16% Similarity=0.099 Sum_probs=117.1
Q ss_pred CCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEE
Q psy7036 7 FAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKV 86 (254)
Q Consensus 7 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 86 (254)
.+|.|...|.. .+.+|++++|.|.+.+ +.+.+.|+|++.... . ... .|.|.+++..|+|.|+|
T Consensus 7 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~~~---------~-~~~-----~L~i~~v~~~D~G~Y~C 69 (184)
T 2gi7_A 7 PKPSLQALPSS-LVPLEKPVTLRCQGPP-GVDLYRLEKLSSSRY---------Q-DQA-----VLFIPAMKRSLAGRYRC 69 (184)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECST-TCSEEEEEETTTCCE---------E-SSS-----EEEESSCCGGGCEEEEE
T ss_pred CCCeEEeCCCc-cccCCCcEEEEEeCCC-CCCEEEEEECCcccc---------C-ccc-----EEEECcCChhhCceEEE
Confidence 57888888875 7899999999999976 778999999886511 1 111 79999999999999999
Q ss_pred EEEcCCCc--eEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEc
Q psy7036 87 KAKNKMGE--VAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSID 164 (254)
Q Consensus 87 ~~~~~~~~--~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~ 164 (254)
.+.|..+. ....+.|.|... ..+|.+...+ ...+.+|+.+.|.|.+.+.+ +.+.|+|++..+..... ..
T Consensus 70 ~a~n~~g~~~~s~~~~l~V~~~---~~~p~i~~~p-~~~v~~G~~v~l~C~~~~~~-~~~~w~k~g~~~~~~~~--~~-- 140 (184)
T 2gi7_A 70 SYQNGSLWSLPSDQLELVATGV---FAKPSLSAQP-GPAVSSGGDVTLQCQTRYGF-DQFALYKEGDPAPYKNP--ER-- 140 (184)
T ss_dssp EEEETTEEBCCCCCEEEEEESS---SCCCEEEEEC-CCSSCCTTCEEEEEECSSCC-CEEEEEECCCCTTSCCC--CE--
T ss_pred EEEcCCCccCCCCCEEEEecCc---CCCCEEEeCC-CceecCCCcEEEEEEcCCCC-cEEEEEECCCcCcceec--CC--
Confidence 99987653 234566666421 1234443333 34567899999999976554 69999999987654211 11
Q ss_pred CCCCceeeEEEEccCCCCCceeEEEEEEcCCC
Q psy7036 165 KDGHSYFASLEIIDVTIEDAGKYKVTAKNELG 196 (254)
Q Consensus 165 ~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~ 196 (254)
.....|.|.+++.+|.|.|+|.|.|..+
T Consensus 141 ----~~~~~L~i~~v~~~D~G~Y~C~a~n~~~ 168 (184)
T 2gi7_A 141 ----WYRASFPIITVTAAHSGTYRCYSFSSRD 168 (184)
T ss_dssp ----EEEESSSEEEETTCCSEEEEEEEECTTS
T ss_pred ----CceEEEEEccCCccCCeEEEEEEEeCCC
Confidence 1113688999999999999999999754
No 122
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.93 E-value=3.9e-25 Score=157.64 Aligned_cols=183 Identities=11% Similarity=0.036 Sum_probs=126.0
Q ss_pred CCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEE--EEEEeccCCCCCeE
Q psy7036 6 DFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLV--ALELDDVIETDAGL 83 (254)
Q Consensus 6 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~i~~~~~~d~G~ 83 (254)
..+|.|...|. ..+.+|++|+|.|.+.+ +.+.+.|+|+|..+...... .. . ..... .|.|.+++.+|+|.
T Consensus 7 ~~~P~i~~~p~-~~v~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~~~~-~~--~---~~~~~~~~L~I~~v~~~D~G~ 78 (218)
T 1uct_A 7 FPMPFISAKSS-PVIPLDGSVKIQCQAIR-EAYLTQLMIIKNSTYREIGR-RL--K---FWNETDPEFVIDHMDANKAGR 78 (218)
T ss_dssp SCCCCEEESSC-SEEETTCCEEEEECCCT-TCSEEEEEEEETTEEEECSE-EC--C-------CCCEEEECSCCGGGCEE
T ss_pred CCCCEEEecCC-CccCCCCCEEEEEEcCC-CCCEEEEEECCCcccccccc-cC--C---CCcceeeEEEEcccccccCEE
Confidence 35788888887 47899999999999975 67889999988655432211 00 0 00112 69999999999999
Q ss_pred EEEEEEcCCCce--EEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceE
Q psy7036 84 YKVKAKNKMGEV--AASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKF 161 (254)
Q Consensus 84 Y~C~~~~~~~~~--~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~ 161 (254)
|+|.+.|..+.. ...+.|.|... ..+|.+...+ ...+.+|+.++|.|...+.+.+.+.|+|+|..+... ..
T Consensus 79 Y~C~a~n~~~~~~~s~~~~l~V~~~---~~~P~i~~~p-~~~v~~G~~v~L~C~~~~~~~~~~~W~k~g~~~~~~---~~ 151 (218)
T 1uct_A 79 YQCQYRIGHYRFRYSDTLELVVTGL---YGKPFLSADR-GLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQ---HQ 151 (218)
T ss_dssp EEEEEEETTTEEEECCCEEEEEECS---SCCCEEEESS-CSEECTTCCCEEEEECSSSCCSEEEEEETTCSSCCS---EE
T ss_pred EEEEEEcCCCceeecCCEEEEEcCc---ccCCEEEeCC-CCccCCCCCEEEEEeCCCCCCCEEEEEECCCccccc---cc
Confidence 999999876532 33456666531 1234443333 346789999999997667777899999999876431 11
Q ss_pred EEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCC-----cceEEEEEEEec
Q psy7036 162 SIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELG-----ESNATISLNFDS 208 (254)
Q Consensus 162 ~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~-----~~~~~~~~~v~~ 208 (254)
....+ ..|.|.+++.+|+|.|+|.|.|... ..+..+.|.|..
T Consensus 152 ~~~~~-----~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g 198 (218)
T 1uct_A 152 SGEHP-----ANFSLGPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTD 198 (218)
T ss_dssp ECSSS-----EEEECCSCCGGGCEEEEEEEECTTSTTEECCCCCCEEEEEC-
T ss_pred CCCcc-----CEEEEccCCcccCEEEEEEEEcCCCCCcCCCCCCcEEEEEec
Confidence 11111 3799999999999999999998642 234456666654
No 123
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.93 E-value=4.7e-25 Score=153.42 Aligned_cols=164 Identities=11% Similarity=0.130 Sum_probs=119.5
Q ss_pred ceeecCCCeEEEEEEEeeCCCCceEEEeCCEE--eeeCC----------cceEEEeecCCcceEEEEEEeccCCCCCeEE
Q psy7036 17 LRQEDEGNRLIFECQLLCNPKPDIVWFRGETQ--LSEDT----------RTVMKTTPIGTNKYLVALELDDVIETDAGLY 84 (254)
Q Consensus 17 ~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~--~~~~~----------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 84 (254)
.+.+.+|++++|.|.+.+.+.+.+.|++++.. +.... ..+..............|.|.+++..|+|.|
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y 83 (184)
T 2ny1_B 4 VVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTY 83 (184)
T ss_dssp EEEEETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEE
T ss_pred cEEEeCCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEEE
Confidence 45788999999999998888899999999862 22111 1111111100011223699999999999999
Q ss_pred EEEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEc
Q psy7036 85 KVKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSID 164 (254)
Q Consensus 85 ~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~ 164 (254)
+|.+.+..+ .+.|.|... .. +....+.+|+.+.|.|.+.+.|.+.+.|++++..+. .
T Consensus 84 ~C~~~~~~~----~~~l~V~~~---------~~-~~~~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~~--------~- 140 (184)
T 2ny1_B 84 ICEVEDQKE----EVQLLVFGL---------TA-NSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNI--------Q- 140 (184)
T ss_dssp EEEETTEEE----EEEEEEEEE---------EE-SSCSEEETTCCEEEEEECCTTCCCEEEEECTTSCEE--------E-
T ss_pred EEEEEcCCC----cEEEEEEEe---------cC-CCCceeecCCCEEEEEEcCCCCCCEEEEEeCCCccc--------c-
Confidence 999987644 445555421 01 122356789999999999899999999999875441 1
Q ss_pred CCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEec
Q psy7036 165 KDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDS 208 (254)
Q Consensus 165 ~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~ 208 (254)
.+ ..|.|.+++.+|.|.|+|.|.|..+.....+.|.|..
T Consensus 141 ~~-----~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~ 179 (184)
T 2ny1_B 141 GG-----KTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLA 179 (184)
T ss_dssp ES-----SEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred Cc-----eEEEEecCCcCCCeEEEEEEEECCceEEEEEEEEEEe
Confidence 11 2799999999999999999999888888888888875
No 124
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.93 E-value=5.8e-25 Score=153.43 Aligned_cols=168 Identities=15% Similarity=0.129 Sum_probs=118.1
Q ss_pred CCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEE
Q psy7036 7 FAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKV 86 (254)
Q Consensus 7 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 86 (254)
.+|.|...|.. .+.+|++|+|.|.+.+ +...+.|+|+|..+....... ........|.|.+++..|+|.|+|
T Consensus 3 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~------~~~~~~~~L~I~~v~~~D~G~Y~C 74 (188)
T 1oll_A 3 PKPFIWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPKP------PERINKVKFYIPDMNSRMAGQYSC 74 (188)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECCSS------CTTCCEEEEEESSCCGGGCEEEEE
T ss_pred CCCEEEeecCC-cCCCCCCEEEEEecCC-CCCEEEEEECCCccccccccc------CCCcceeEEEeCcCCcccCeEEEE
Confidence 36888888877 7899999999999864 456899999998765321100 011223379999999999999999
Q ss_pred EEEcCCCc--eEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEc
Q psy7036 87 KAKNKMGE--VAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSID 164 (254)
Q Consensus 87 ~~~~~~~~--~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~ 164 (254)
.+.+..+. ....+.|.|... ..+|.+...+ ...+.+|+.++|.|.+.+ +.+.+.|+|++..+... ....
T Consensus 75 ~~~~~~~~~~~s~~~~l~V~~~---~~~p~i~~~p-~~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~----~~~~ 145 (188)
T 1oll_A 75 IYRVGELWSEPSNLLDLVVTEM---YDTPTLSVHP-GPEVISGEKVTFYCRLDT-ATSMFLLLKEGRSSHVQ----RGYG 145 (188)
T ss_dssp EEEETTEECCCCCCEEEEEESC---SCCCEEEEES-CSEEETTCEEEEEEECSS-SCSEEEEEEESSSCEEE----EEEC
T ss_pred EecCCCCCCCCCCceEEEeccc---CCCCeEEECC-CCccccCCEEEEEEEcCC-CCCEEEEEECCcccccc----ccCC
Confidence 99876442 234566666531 1234443333 345778999999999765 45689999998765431 1111
Q ss_pred CCCCceeeEEEEccCCCCCceeEEEEEEcCC
Q psy7036 165 KDGHSYFASLEIIDVTIEDAGKYKVTAKNEL 195 (254)
Q Consensus 165 ~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~ 195 (254)
.. ...|.|.+++.+|+|.|+|.|.|..
T Consensus 146 ~~----~~~L~I~~v~~~d~G~Y~C~a~n~~ 172 (188)
T 1oll_A 146 KV----QAEFPLGPVTTAHRGTYRCFGSYNN 172 (188)
T ss_dssp SS----EEEEEEEECCGGGCEEEEEECEEET
T ss_pred Cc----eeEEEECCCCcCCCcEEEEEEEcCC
Confidence 11 1379999999999999999999864
No 125
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.93 E-value=3.5e-25 Score=164.99 Aligned_cols=190 Identities=14% Similarity=0.170 Sum_probs=136.1
Q ss_pred CCCeeEeCCCceeecCCCeEEEEEEEeeCCC-CceEEE-eCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCe-E
Q psy7036 7 FAPSFTQKPQLRQEDEGNRLIFECQLLCNPK-PDIVWF-RGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAG-L 83 (254)
Q Consensus 7 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~-~~v~W~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G-~ 83 (254)
.+|.+...+....+.+|+.+.|.|.+.+ |. +.++|+ ++|..+....++. ....+ .|.|.+++..|+| .
T Consensus 90 ~~~~~~~~~~~~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~~~~~~~--~~~~~------~L~i~~v~~~d~G~~ 160 (290)
T 2o26_X 90 DPAKLFLVGLPLFGKEDSDALVRCPLTD-PQVSQYSLIECDGKSLPTDLTFV--PNPKA------GITIKNVKRAYHRLC 160 (290)
T ss_dssp CSSCCBCCCCCEEEETTSCEEECCCBSC-CSCEEEEEEETTSCCCCTTCEEE--EETTT------EEEEESCCGGGTTCE
T ss_pred CCCcccccccceEEecCCeEEEeCcCCC-CCCceEEEEeCCCcCCCCCCcee--eCCCC------CEEEecccHHHCCCE
Confidence 3444445666778889999999999985 77 899995 6777765543322 22222 6999999999999 9
Q ss_pred EEEEEEcCCCceE-EEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCe-EEEEECCEec----ccCC
Q psy7036 84 YKVKAKNKMGEVA-ASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPT-VIWSHSGVQV----KEDK 157 (254)
Q Consensus 84 Y~C~~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~-~~W~~~~~~~----~~~~ 157 (254)
|+|.+.|..+... ..+.|.|... ...+|.+...+....+..|+.+.|.|.+.+.|.+. +.|++++..+ ....
T Consensus 161 Y~C~a~n~~~~~~s~~~~l~V~~~--~~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~ 238 (290)
T 2o26_X 161 VRCAAQRDGTWLHSDKFTLKVREA--IKAIPVVSVPETSHLLKKGDTFTVVCTIKDVSTSVNSMWLKMNPQPQHIAQVKH 238 (290)
T ss_dssp EEEEEEETTEEEECCCEEEEEECC--CCSCCEEECSCSBCCCCTTCCEEEEEEEEESSTTCEEEEEEESSSEEECCCEEC
T ss_pred EEEEEEECCceEEeEEEEEEEEeC--CCCCCccccCCCcceEecCCcEEEEEEEecCCcceeEEEecCCCCCccceeecc
Confidence 9999999855432 2466666521 12456665555566788999999999999999986 9999998763 2222
Q ss_pred cceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEec
Q psy7036 158 RHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDS 208 (254)
Q Consensus 158 ~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~ 208 (254)
...+. ........+.|.|.++..+|+|.|+|.|.|..|.....+.|.|..
T Consensus 239 ~~~~~-~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 288 (290)
T 2o26_X 239 NSWHR-GDFNYERQETLTISSARVDDSGVFMCYANNTFGSANVTTTLKVVE 288 (290)
T ss_dssp CEEEE-ETTEEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEECC--
T ss_pred ccccc-CceeeEEEEEEEEcCCCcccCeEEEEEEeCCCCcEEEEEEEEEEe
Confidence 21121 110112235899999999999999999999999988888777753
No 126
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.93 E-value=1.5e-24 Score=154.11 Aligned_cols=185 Identities=18% Similarity=0.227 Sum_probs=122.8
Q ss_pred eeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCC--EEe---e-------e--CCcceEEEeecCCcceEEEEEEec
Q psy7036 10 SFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGE--TQL---S-------E--DTRTVMKTTPIGTNKYLVALELDD 75 (254)
Q Consensus 10 ~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~--~~~---~-------~--~~~~~~~~~~~~~~~~~~~l~i~~ 75 (254)
.+.+ |....+.+|++++|.|.+.+.+.+.+.|||++ ..+ . . ..++... . ....+.|.|.+
T Consensus 3 ~v~q-p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~--~---~~~~~~L~I~~ 76 (210)
T 1lk3_L 3 VLTQ-PPALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGS--G---SGTDFTLTIDP 76 (210)
T ss_dssp CEEC-CSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEE--E---ETTEEEEEESS
T ss_pred cEEC-CCcEEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEE--e---cCCEEEEEECC
Confidence 3455 88889999999999999998888899999842 211 1 0 1222221 1 11234899999
Q ss_pred cCCCCCeEEEEEEEcCCCceE-EEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEee-CCCC-eEEEEECCEe
Q psy7036 76 VIETDAGLYKVKAKNKMGEVA-ASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQA-DPAP-TVIWSHSGVQ 152 (254)
Q Consensus 76 ~~~~d~G~Y~C~~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~-~~~W~~~~~~ 152 (254)
++.+|+|.|+|.+.+..+... ....|.|... ..+|.+...........|+.+.|.|.+.+ .|.+ .+.|+++|..
T Consensus 77 v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~---~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~ 153 (210)
T 1lk3_L 77 VEADDTAIYFCQQSWNGPLTFGAGTKLELKRA---DAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTE 153 (210)
T ss_dssp CCGGGCEEEEEEECSSSSCEECCCEEEEECCC---CBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEE
T ss_pred CCHHHCeEEEEEEEcCCCceeCCCEEEEEcCC---CcCCeEEEECCchhhccCCcEEEEEEEEeEeCCceEEEEEeCCcc
Confidence 999999999999998766432 2345666421 12444433222222347899999999987 4443 8999999998
Q ss_pred cccC-Cc-ceEEEcCCC-CceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEE
Q psy7036 153 VKED-KR-HKFSIDKDG-HSYFASLEIIDVTIEDAGKYKVTAKNELGESNATIS 203 (254)
Q Consensus 153 ~~~~-~~-~~~~~~~~~-~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~ 203 (254)
+... .. .......++ +...+.|.|.++..+|.|.|+|.|.|..........
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~ 207 (210)
T 1lk3_L 154 RRDGVLDSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSSSPVVKS 207 (210)
T ss_dssp CCTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSSCEEEE
T ss_pred CCCCceEccCCccCCCCCEEEEEEEEEChHHhccCCcEEEEEEecCCCCeeeee
Confidence 7644 11 111111222 233468999999999999999999998765544433
No 127
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.93 E-value=4.6e-24 Score=160.65 Aligned_cols=187 Identities=16% Similarity=0.128 Sum_probs=136.1
Q ss_pred CCCCCCeeEeCCCceeecCCCeEEEEEEEe-eCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCe
Q psy7036 4 AEDFAPSFTQKPQLRQEDEGNRLIFECQLL-CNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAG 82 (254)
Q Consensus 4 ~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~-~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G 82 (254)
.+...|.+...+....+..|+.+.+.|.+. +.|.+.+.|++++..+..... ......+.....+.|.|.+.+..|+|
T Consensus 113 ~v~~~P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~~~~~~~--~~~~~~~~~~~~s~l~i~~~~~~d~g 190 (313)
T 4fqp_A 113 RVLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTSQ--VPGFLSGTVTVTSLWILVPSSQVDGK 190 (313)
T ss_dssp CCBBCCEEEEEECCBCCCSSCEEEEEEEEEEEBSCCEEEEEETTCCEEEEEE--EECSSTTCEEEEEEEEECCCGGGTTC
T ss_pred eeccCCcceecccceEeecCceEEEEEEccCccCCcEEEeecCCccccccce--eeeecccccccceeeeecccccccCe
Confidence 344567776666666778899999999875 689999999999887654322 11112222233446899999999999
Q ss_pred EEEEEEEcCCCceE--EEEEEEEeccccCCCCCccc-cCCCeeeecCCCeEEEEEEEeeCCCC-eEEEEECCEecccCCc
Q psy7036 83 LYKVKAKNKMGEVA--ASINLNFSREQIDGLAPTFL-KKPSIRQEDDGKRLLFECRIQADPAP-TVIWSHSGVQVKEDKR 158 (254)
Q Consensus 83 ~Y~C~~~~~~~~~~--~~~~l~v~~~~~~~~~~~~~-~~~~~~~~~~g~~~~l~C~~~~~~~~-~~~W~~~~~~~~~~~~ 158 (254)
.|+|.+.|..+... ..+.|.|. .+|.+. .......+..|+.+.|.|.+.|+|.| .+.|++++..+....
T Consensus 191 ~Y~C~a~n~~~~~~~~~~~~l~V~------~~P~v~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~~~~~~l~~~~- 263 (313)
T 4fqp_A 191 NVTCKVEHESFEKPQLLTVNLTVY------YPPEVSISGYDNNWYLGQNEATLTCDARSNPEPTGYNWSTTMGPLPPFA- 263 (313)
T ss_dssp EEEEEEECTTSSSCEEEEEECCBC------EEEEEEEECCCSCEETTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTE-
T ss_pred eEEEEEEccCcCccceeeeecccc------cCCccccccccceeecCCCeEEEEEEecCCCCCcEEEEEECCEECCCce-
Confidence 99999999776543 34444443 234332 22233456678999999999999988 699999998775321
Q ss_pred ceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEec
Q psy7036 159 HKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDS 208 (254)
Q Consensus 159 ~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~ 208 (254)
.. .++ .|.|.++..+|+|.|+|.|.|..|....++.|.|..
T Consensus 264 ---~~-~~~-----~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 304 (313)
T 4fqp_A 264 ---VA-QGA-----QLLIRPVDKPINTTLICNVTNALGARQAELTVQVKE 304 (313)
T ss_dssp ---EE-ETT-----EEEECCCSSCCEEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred ---EE-eCC-----EEEECcCChhhCEEEEEEEEeCCCcEEEEEEEEEEe
Confidence 11 122 799999999999999999999999998888888875
No 128
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.92 E-value=2e-23 Score=165.79 Aligned_cols=239 Identities=15% Similarity=0.201 Sum_probs=142.9
Q ss_pred eEeCCCceeecCCCeEEEEEEEeeCC--CCceEEEeCC--EE---eee------------CCcceEEEeecCCcceEEEE
Q psy7036 11 FTQKPQLRQEDEGNRLIFECQLLCNP--KPDIVWFRGE--TQ---LSE------------DTRTVMKTTPIGTNKYLVAL 71 (254)
Q Consensus 11 ~~~~~~~~~v~~g~~v~l~C~~~~~~--~~~v~W~~~~--~~---~~~------------~~~~~~~~~~~~~~~~~~~l 71 (254)
.++.|....+.+|++++|.|.+.+.+ ...+.|||+. .. +.. ....++....+ .....+.|
T Consensus 4 ~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~~L 82 (475)
T 1iga_A 4 LLEQSGAEVKKPGASVKVSCKASGYSFTSYGLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTFTRD-TSATTAYM 82 (475)
T ss_pred eeccCCcEEEeCCCCEEEEEEecCCCCCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEc-CCCCeEEE
Confidence 34567788999999999999998654 5689999853 11 100 00112221111 11234589
Q ss_pred EEeccCCCCCeEEEEEEEcCCCc------eEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeC-CC-C-
Q psy7036 72 ELDDVIETDAGLYKVKAKNKMGE------VAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQAD-PA-P- 142 (254)
Q Consensus 72 ~i~~~~~~d~G~Y~C~~~~~~~~------~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~-~- 142 (254)
.|.+++.+|+|.|.|.+.+..+. ......|.|... ...+|.+..... .....|+.+.|.|.+.+. |. +
T Consensus 83 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~--~~~~P~i~~~~~-~~~~~g~~v~L~C~~~g~~P~~p~ 159 (475)
T 1iga_A 83 GLSSLRPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTVSSA--SPTSPKVFPLSL-CSTQPDGNVVIACLVQGFFPQEPL 159 (475)
T ss_pred EECCCChhhCEEEEEEEeccCCCccceeeecCceEEEeccC--CCcCCeEEecCc-cccCCCCeEEEEEEEeeecCCCce
Confidence 99999999999999999987652 223456666421 012333322221 123579999999999987 55 4
Q ss_pred eEEEEECCEecccCCcceEEEcCCC-CceeeEEEEccCCCCCceeEEEEEEcCCCcc-eEEEEEEEecCCC--------C
Q psy7036 143 TVIWSHSGVQVKEDKRHKFSIDKDG-HSYFASLEIIDVTIEDAGKYKVTAKNELGES-NATISLNFDSDDA--------P 212 (254)
Q Consensus 143 ~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~-~~~~~~~v~~~~~--------~ 212 (254)
.+.|++++...............++ +...+.|.|.....+|.|.|+|.|.|..+.. ...+.+.|..... .
T Consensus 160 ~v~W~~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~v~l~V~~~~~~~~~~~~~~ 239 (475)
T 1iga_A 160 SVTWSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPSQDVTVPCPVPSTPPTPSPSTPPT 239 (475)
T ss_pred EEEEcCCCcccceEeCCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCCceeeeEecccccCccccccccccc
Confidence 8999998753211110001101222 2233568898888899999999999987632 2333332311000 0
Q ss_pred CCCCCCCCee-ecCCccccccCCCCcEEEEEEEeccCC---CceeC
Q psy7036 213 VPGEGTKPVF-TERPVTKQSDDDLNDIVIECRLVGEPE---PTISW 254 (254)
Q Consensus 213 ~~~~~~~p~~-~~~~~~~~~~~g~~~~~l~C~~~~~p~---p~~~W 254 (254)
......+|.+ ...|....+.+|+ .+.|.|.+.|.++ +.++|
T Consensus 240 ~~~~~~~p~v~~~~p~~~~~~~G~-~v~L~C~~~g~~p~~~~~i~W 284 (475)
T 1iga_A 240 PSPSCCHPRLSLHRPALEDLLLGS-EANLTCTLTGLRDASGVTFTW 284 (475)
T ss_pred CCCCCCCcEEEEcCCChHHhccCC-ceEEEEEEEcccCCCceEEEE
Confidence 0000023444 4344444467888 9999999998754 58888
No 129
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.92 E-value=1.2e-24 Score=160.34 Aligned_cols=207 Identities=18% Similarity=0.217 Sum_probs=122.0
Q ss_pred CCeeEeCCCceeecCCCeEEEEEEEe---eCCCCceEEEeCCEEeeeC----------------CcceEEEeecCCcceE
Q psy7036 8 APSFTQKPQLRQEDEGNRLIFECQLL---CNPKPDIVWFRGETQLSED----------------TRTVMKTTPIGTNKYL 68 (254)
Q Consensus 8 ~p~~~~~~~~~~v~~g~~v~l~C~~~---~~~~~~v~W~~~~~~~~~~----------------~~~~~~~~~~~~~~~~ 68 (254)
.+.+...+....+.+|++++|.|.+. +.+.+.+.|++++...... ...++.... ......
T Consensus 5 ~~~v~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~ 83 (268)
T 3mj6_A 5 LPGLTVSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVG-DTFHND 83 (268)
T ss_dssp -------CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECS-CTTTTB
T ss_pred ccccccCCCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEee-cCCCCE
Confidence 45677778888999999999999997 5677789999955321000 001111111 011122
Q ss_pred EEEEEeccCCCCCeEEEEEEEcCCCce--EEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEE---eeCCCCe
Q psy7036 69 VALELDDVIETDAGLYKVKAKNKMGEV--AASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRI---QADPAPT 143 (254)
Q Consensus 69 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~--~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~---~~~~~~~ 143 (254)
.+|.|.+++.+|+|.|+|.+.+..+.. ...+.|.|.. ..+....+..|+.+.|.|.+ .+.|.+.
T Consensus 84 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~-----------~~p~~~~v~~G~~v~L~C~~~~~~~~p~~~ 152 (268)
T 3mj6_A 84 GSLLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVLP-----------EEPRDLRVRVGDTTQMRCSIQSTEEKRVTK 152 (268)
T ss_dssp CCEEECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEEC-----------CCCSEEEEETTCCEEECCBCEESSSSCCCE
T ss_pred EEEEECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEec-----------cCCCccccccCCcEEEEEEecCCCCCCccc
Confidence 479999999999999999999876543 3445555531 12335678899999999999 5668899
Q ss_pred EEEEECCEec-cc-------------------CCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEE
Q psy7036 144 VIWSHSGVQV-KE-------------------DKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATIS 203 (254)
Q Consensus 144 ~~W~~~~~~~-~~-------------------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~ 203 (254)
+.|++++... .. ....+.....+.......|.|.+++.+|.|.|+|.|.|..+.....+.
T Consensus 153 v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~ 232 (268)
T 3mj6_A 153 VNWMFSSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKTIV 232 (268)
T ss_dssp EEEEEECTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred eEEEecCCCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCceEEEEEE
Confidence 9999943211 00 000011111111111247999999999999999999999888888888
Q ss_pred EEEecCCCCCCCCCCCCeeecCCccccccCCC
Q psy7036 204 LNFDSDDAPVPGEGTKPVFTERPVTKQSDDDL 235 (254)
Q Consensus 204 ~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~ 235 (254)
|.|... +|.+...|....+..++
T Consensus 233 l~V~~~---------~p~~~~~p~~~~~~~~q 255 (268)
T 3mj6_A 233 LHVVQD---------EFQRTISPTPPTDKGQQ 255 (268)
T ss_dssp EEEECC--------------------------
T ss_pred EEEEcC---------CCeeeeCCCCCCCCcce
Confidence 888542 34455555555555554
No 130
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.92 E-value=3.8e-25 Score=173.80 Aligned_cols=236 Identities=12% Similarity=0.162 Sum_probs=144.3
Q ss_pred eCCCceeecCCCeEEEEEEEeeCC--CCceEEEeCC--EE---eeeC------------CcceEEEeecCCcceEEEEEE
Q psy7036 13 QKPQLRQEDEGNRLIFECQLLCNP--KPDIVWFRGE--TQ---LSED------------TRTVMKTTPIGTNKYLVALEL 73 (254)
Q Consensus 13 ~~~~~~~v~~g~~v~l~C~~~~~~--~~~v~W~~~~--~~---~~~~------------~~~~~~~~~~~~~~~~~~l~i 73 (254)
..+....+.+|++++|.|.+.+.+ .+.+.|||++ .. +... ...++....+. ....+.|.|
T Consensus 4 ~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~-~~~~~~L~I 82 (434)
T 1igy_B 4 QESGAELARPGASVKMSCKASGYTFTTYTIHWIKQRPGQGLEWIGYINPSSVYTNYNQRFKDKATLTRDR-SSNTANIHL 82 (434)
T ss_dssp ECCCCCEECTBCCEEECCEECSSCGGGCCCEEEEECTTCCEEEEEECCSSSCCCCCCGGGTTTEECCBCG-GGCBBCEEE
T ss_pred ECCCCeEecCCCCEEEEEEccCCcccCceEEEEEECCCCCCEEEEEEccCCCceecCccccccEEEEEEC-CCCEEEEEE
Confidence 455667899999999999998754 6789999863 21 1100 01122211111 112337999
Q ss_pred eccCCCCCeEEEEEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeC-CCC-eEEEEECCE
Q psy7036 74 DDVIETDAGLYKVKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQAD-PAP-TVIWSHSGV 151 (254)
Q Consensus 74 ~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~-~~~W~~~~~ 151 (254)
.+++.+|+|.|+|.+.+..+.......|.|... ...+|.+........+..|+.+.|.|.+.+. |.+ .+.|++++.
T Consensus 83 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~--~~~~P~i~~~~~~~~~~~G~~v~L~C~~~g~~P~p~~v~W~k~~~ 160 (434)
T 1igy_B 83 SSLTSDDSAVYYCVREGEVPYWGQGTTVTVSSA--KTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSL 160 (434)
T ss_dssp CSBCGGGCSEECCCCSSSSCCCCCCEECEECCS--CCBCCCEEEECCCCCCCCTTEEEEEEEEEEEBSSCCEEEETTTTB
T ss_pred CCCChHHCEEEEEEEEccccccCCceEEEEccC--CCCCCeEEEcCCccccCCCCcEEEEEEEeeecCCCeEEEEeeCCc
Confidence 999999999999999886444444556666521 0123333222222234689999999999886 666 899999987
Q ss_pred ecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEecCCCCC---CCCCCCCeeecCCcc
Q psy7036 152 QVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDSDDAPV---PGEGTKPVFTERPVT 228 (254)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~p~~~~~~~~ 228 (254)
.+........ .....+...+.|.|.++..+| |.|+|.|.|..+.......+.+......+ +....+..+...|..
T Consensus 161 ~~~~~~~~~~-~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~v~~~~p~~ 238 (434)
T 1igy_B 161 SSGVHTFPAV-LQSDLYTLSSSVTVPSSPRPS-ETVTCNVAHPASSTKVDKKIVPRDCGCKPCICTVPEVSSVFIFPPKP 238 (434)
T ss_dssp CSSEEECCCE-ECSSCEEEEEEEEEETTTTTS-SCCEEEEECTTTTCCEEEECCCCCCCCCCCCCCCSSSCCEEEECCCH
T ss_pred CCCeEecCce-ecCCcEEEEEEEEEcchhcCC-CcEEEEEEeCCCCccceeeccCCCCCCccccCCCCcCcEEEEeCCCh
Confidence 5321110011 111222233579999999888 99999999998876555544332100000 000012333434433
Q ss_pred cc-ccCCCCcEEEEEEEeccC----CCceeC
Q psy7036 229 KQ-SDDDLNDIVIECRLVGEP----EPTISW 254 (254)
Q Consensus 229 ~~-~~~g~~~~~l~C~~~~~p----~p~~~W 254 (254)
.. +.+|+ .+.|.|.+.|.| .+.++|
T Consensus 239 ~~~v~~G~-~~~L~C~~~g~~p~P~~~~i~W 268 (434)
T 1igy_B 239 KDTLLITV-TPKVTCVVVDISKDDPEVQFSW 268 (434)
T ss_dssp HHHHSTTS-CCEEEEEECCCCSSCCCCCBCB
T ss_pred HHhcccCC-CcEEEEEEeccccCCCCeEEEE
Confidence 32 78899 999999999884 347888
No 131
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.92 E-value=7.6e-25 Score=151.03 Aligned_cols=157 Identities=13% Similarity=0.178 Sum_probs=112.0
Q ss_pred ceeecCCCeEEEEEEEee--CCCCceEEEeCCEEeeeC--------CcceEEEeecCCcceEEEEEEeccCCCCCeEEEE
Q psy7036 17 LRQEDEGNRLIFECQLLC--NPKPDIVWFRGETQLSED--------TRTVMKTTPIGTNKYLVALELDDVIETDAGLYKV 86 (254)
Q Consensus 17 ~~~v~~g~~v~l~C~~~~--~~~~~v~W~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 86 (254)
.+.+.+|++|+|.|...+ .+.+.+.|+|++..+... ...++....++ +|.|.+++..|+|.|+|
T Consensus 5 ~v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~g------sL~I~~v~~~D~G~Y~C 78 (176)
T 1hng_A 5 TVWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANG------DLKIKNLTRDDSGTYNV 78 (176)
T ss_dssp EEEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTTS------CEEESSCCGGGCEEEEE
T ss_pred EEEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECCCC------cEEEcccccccCEEEEE
Confidence 456789999999995433 456789999999765310 11122222121 59999999999999999
Q ss_pred EEEcCCCce--EEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEc
Q psy7036 87 KAKNKMGEV--AASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSID 164 (254)
Q Consensus 87 ~~~~~~~~~--~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~ 164 (254)
.+.|..|.. ...+.|.|.... ..|. .. ..+..+.|.|.+.+.|.+.+.|++++..+.....
T Consensus 79 ~~~n~~g~~~~~~~~~l~V~~~~---~~p~-------i~-~~~~~v~L~C~~~g~p~p~i~W~~~g~~l~~~~~------ 141 (176)
T 1hng_A 79 TVYSTNGTRILNKALDLRILEMV---SKPM-------IY-WECSNATLTCEVLEGTDVELKLYQGKEHLRSLRQ------ 141 (176)
T ss_dssp EEEETTCCEEEEEEEEEEEECCC---CCCE-------EE-EETTTTEEEEECSSCSSCEEEEEETTEEEEEESS------
T ss_pred EEEeCCCCEEEEEEEEEEEeCCC---CCCE-------EE-ecCCcEEEEEEecCCCCcEEEEEECCEECCCCCc------
Confidence 999998876 566777775310 1111 11 1244589999999999999999999987754322
Q ss_pred CCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEE
Q psy7036 165 KDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLN 205 (254)
Q Consensus 165 ~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~ 205 (254)
+.|.+++.+|.|.|+|.|.|..|.......|.
T Consensus 142 ---------~~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~ 173 (176)
T 1hng_A 142 ---------KTMSYQWTNLRAPFKCKAVNRVSQESEMEVVN 173 (176)
T ss_dssp ---------SEEEEECSCCSSCEEEEEEETTEEEEEEECCC
T ss_pred ---------EEEEEEEccCCeEEEEEEEecCCCceeccccc
Confidence 33446778999999999999999877766554
No 132
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.92 E-value=3.2e-24 Score=153.17 Aligned_cols=187 Identities=12% Similarity=0.197 Sum_probs=119.1
Q ss_pred CeeEeCCCceeecCCCeEEEEEEEeeC-CCCceEEEeCC---E--Ee-eeCC----------cceEEEeecCCcceEEEE
Q psy7036 9 PSFTQKPQLRQEDEGNRLIFECQLLCN-PKPDIVWFRGE---T--QL-SEDT----------RTVMKTTPIGTNKYLVAL 71 (254)
Q Consensus 9 p~~~~~~~~~~v~~g~~v~l~C~~~~~-~~~~v~W~~~~---~--~~-~~~~----------~~~~~~~~~~~~~~~~~l 71 (254)
|.+++.| ...+.+|++++|.|.+.+. +.+.+.|||.+ . .+ .... ..++.... ....++|
T Consensus 2 ~~v~~~p-~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~---~~~~~~L 77 (218)
T 3s96_B 2 LVLTQSS-SASFSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSS---SGADRYL 77 (218)
T ss_dssp CSEECCS-EEEEETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEE---ETTEEEE
T ss_pred CeEEeCC-cEEECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEec---CCceEEE
Confidence 4566677 8889999999999999988 88999999832 1 11 1000 01111111 1223479
Q ss_pred EEeccCCCCCeEEEEEEEcCCC-----ceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEee-CCCC-eE
Q psy7036 72 ELDDVIETDAGLYKVKAKNKMG-----EVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQA-DPAP-TV 144 (254)
Q Consensus 72 ~i~~~~~~d~G~Y~C~~~~~~~-----~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~-~~ 144 (254)
.|.+++.+|+|.|+|.+.+..+ .......|.|.... ..+|.+...........|+.+.|.|.+.+ .|.+ .+
T Consensus 78 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~--~~~P~~~~~~~~~~~~~~~~v~L~C~~~g~~p~~~~v 155 (218)
T 3s96_B 78 SISNIQPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLGQP--KSTPTLTVFPPSSEELKENKATLVCLISNFSPSGVTV 155 (218)
T ss_dssp EESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCC--CBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEE
T ss_pred EEccCCcccCEEEEEEEecCCCCceeEEEcCcEEEEEecCC--CCCceEEeeCCCcccccCCcEEEEEEECcccCCCeEE
Confidence 9999999999999999998775 22334566765311 13344333222233345789999999988 5666 89
Q ss_pred EEEECCEecccCCcceEEEcCCC-CceeeEEEEccCCCCCceeEEEEEEcCCCcceEE
Q psy7036 145 IWSHSGVQVKEDKRHKFSIDKDG-HSYFASLEIIDVTIEDAGKYKVTAKNELGESNAT 201 (254)
Q Consensus 145 ~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~ 201 (254)
.|++++..+............++ ....+.|.|.....+|.|.|+|.|.|..+....+
T Consensus 156 ~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~ 213 (218)
T 3s96_B 156 AWKANGTPITQGVDTSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGDTVEKS 213 (218)
T ss_dssp EEEETTEEC--------------CEEEEEEEEEEHHHHHTCSCEEEEEEETTEEEEEE
T ss_pred EEEECCEECcCceecCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCCccccc
Confidence 99999998865322111111122 2223468888888889999999999987655444
No 133
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.92 E-value=2.5e-24 Score=153.26 Aligned_cols=188 Identities=15% Similarity=0.193 Sum_probs=126.4
Q ss_pred CeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCC---E--Eeee---------CCcceEEEeecCCcceEEEEEEe
Q psy7036 9 PSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGE---T--QLSE---------DTRTVMKTTPIGTNKYLVALELD 74 (254)
Q Consensus 9 p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~---~--~~~~---------~~~~~~~~~~~~~~~~~~~l~i~ 74 (254)
|.+.+.|....+.+|++++|.|.+.+.+.+.+.|||.+ . .+.. ..++... . ....+.|.|.
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~--~---~~~~~~L~I~ 76 (213)
T 3r06_A 2 IQMTQSPSSLPASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGS--G---SGRDSSFTIS 76 (213)
T ss_dssp CCEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEE--E---ETTEEEEEES
T ss_pred CeeEeCCCEEEecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEe--c---cCCEEEEEEC
Confidence 56777788899999999999999998888999999832 1 1111 1222222 1 1233489999
Q ss_pred ccCCCCCeEEEEEEEcCCCc-eEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCC--CeEEEEECCE
Q psy7036 75 DVIETDAGLYKVKAKNKMGE-VAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPA--PTVIWSHSGV 151 (254)
Q Consensus 75 ~~~~~d~G~Y~C~~~~~~~~-~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~--~~~~W~~~~~ 151 (254)
+++.+|+|.|+|.+.+..+. ......|.|.. ...+|.+...+.......|+.+.|.|.+.+.++ +.+.|++++.
T Consensus 77 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~---~~~~p~v~~~~~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~ 153 (213)
T 3r06_A 77 SLESEDIGSYYCQQYYNYPWTFGPGTKLEIKR---ADAKPTVSIFPPSSEQLGTGSATLVCFVNNFYPKDINVKWKVDGS 153 (213)
T ss_dssp SCCGGGCSEEEEEECSSSSCEECCCEEEEECC---CCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCEEEEEEETTE
T ss_pred CCCcccCEEEEEecccCCceEEcCCceEEEec---cCCCceeeeeCCCceecCCCCcEEEEEEeeecCCceEEEEEECCc
Confidence 99999999999999887543 23345566631 124454444333334456888999999988654 3799999999
Q ss_pred ecccCC--cceEEEcCCC-CceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEE
Q psy7036 152 QVKEDK--RHKFSIDKDG-HSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISL 204 (254)
Q Consensus 152 ~~~~~~--~~~~~~~~~~-~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~ 204 (254)
.+.... ........++ +...+.|.|.....+|.|.|+|.|.|..........+
T Consensus 154 ~l~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~v~n~~~~~~~~~~~ 209 (213)
T 3r06_A 154 EKRDGVLQSVTDQDSKDSTYSLSSTLSLTKADYERHNLYTCEVTHKTSTAAIVKTL 209 (213)
T ss_dssp EECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSCEEEEE
T ss_pred ccCCceEeccCceeCCCCcEEEEEEEEeCHHHhccCCeEEEEEEecccCcceEEec
Confidence 876431 1111111222 2334578888888889999999999987655544443
No 134
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.92 E-value=1.3e-24 Score=154.44 Aligned_cols=184 Identities=15% Similarity=0.180 Sum_probs=122.5
Q ss_pred CeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeC--CEEee------------eCCcceEEEeecCCcceEEEEEEe
Q psy7036 9 PSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRG--ETQLS------------EDTRTVMKTTPIGTNKYLVALELD 74 (254)
Q Consensus 9 p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~--~~~~~------------~~~~~~~~~~~~~~~~~~~~l~i~ 74 (254)
|.+.+.+ ...+.+|++++|.|.+. +.+.+.|||+ +..+. ...++.... ....++|.|.
T Consensus 2 ~~v~~~~-~~~v~~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-----~~~~~~L~I~ 73 (211)
T 3tv3_L 2 SALTQPP-SASGSPGQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSK-----SGNTASLTVS 73 (211)
T ss_dssp -CCBCCS-EEEECTTCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEE-----ETTEEEEEEE
T ss_pred ceEEeCc-eEEEcCCCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEc-----cCCEEEEEEC
Confidence 3455556 78899999999999998 8889999994 22111 112222221 1223489999
Q ss_pred ccCCCCCeEEEEEEEcCCC--ceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeC--CCCeEEEEECC
Q psy7036 75 DVIETDAGLYKVKAKNKMG--EVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQAD--PAPTVIWSHSG 150 (254)
Q Consensus 75 ~~~~~d~G~Y~C~~~~~~~--~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~--~~~~~~W~~~~ 150 (254)
+++.+|+|.|+|.+.+..+ .......|.|... ...+|.+...+.......|+.+.|.|.+.+. +.+.+.|++++
T Consensus 74 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~--~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g 151 (211)
T 3tv3_L 74 GLQTDDEAVYYCGSLVGNWDVIFGGGTKLTVLGQ--PKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADS 151 (211)
T ss_dssp SCCGGGCEEEEEEEEETTTEEEECCCEEEEECCS--CCBCCEEEEECCCHHHHHTTCEEEEEEEEEEBSSCCEEEEEETT
T ss_pred CCChhHCEEEEEEEecCCCceeECCCceEEEeCC--CCcCCeeEecCCchhhhcCCCeEEEEEeeeecCCCeEEEEEECC
Confidence 9999999999999999876 3444566676521 1134444433333333469999999999885 35789999999
Q ss_pred EecccCCcc-eEEEcCCC-CceeeEEEEccCCCCCceeEEEEEEcCCCcceEEE
Q psy7036 151 VQVKEDKRH-KFSIDKDG-HSYFASLEIIDVTIEDAGKYKVTAKNELGESNATI 202 (254)
Q Consensus 151 ~~~~~~~~~-~~~~~~~~-~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~ 202 (254)
..+...... ......++ +...+.|.|.+...+|.|.|+|.|.|..+...+++
T Consensus 152 ~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~~~~~~~ 205 (211)
T 3tv3_L 152 SPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTV 205 (211)
T ss_dssp EEECTTEEECCCEECTTSSEEEEEEEEECHHHHHHSSCEEEEEEETTEEEEEEE
T ss_pred eecCCCcccCCceECCCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCCCEEeec
Confidence 987642111 11122222 23346799999988999999999999876555443
No 135
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.92 E-value=4e-26 Score=179.37 Aligned_cols=237 Identities=11% Similarity=0.151 Sum_probs=143.7
Q ss_pred CCeeEeCCCceeecCCCeEEEEEEEeeC-CCC-ceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEE
Q psy7036 8 APSFTQKPQLRQEDEGNRLIFECQLLCN-PKP-DIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYK 85 (254)
Q Consensus 8 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~-~~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 85 (254)
+|.+...+....+.+|+.++|.|.+.|. |.+ .+.|++++..+......... ..+.....+.|.|.++...| |.|+
T Consensus 119 ~P~i~~~~~~~~~~~G~~v~L~C~~~g~~P~p~~v~W~k~~~~~~~~~~~~~~--~~~~~~~~s~L~i~~~~~~d-g~Y~ 195 (434)
T 1igy_B 119 PPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVL--QSDLYTLSSSVTVPSSPRPS-ETVT 195 (434)
T ss_dssp CCCEEEECCCCCCCCTTEEEEEEEEEEEBSSCCEEEETTTTBCSSEEECCCEE--CSSCEEEEEEEEEETTTTTS-SCCE
T ss_pred CCeEEEcCCccccCCCCcEEEEEEEeeecCCCeEEEEeeCCcCCCeEecCcee--cCCcEEEEEEEEEcchhcCC-CcEE
Confidence 4554433333346799999999999885 766 99999998753111000000 11222223479999999889 9999
Q ss_pred EEEEcCCCceEEEEEEEEeccc-------cCCCCCccccCCCeee-ecCCCeEEEEEEEeeCC----CCeEEEEECCEec
Q psy7036 86 VKAKNKMGEVAASINLNFSREQ-------IDGLAPTFLKKPSIRQ-EDDGKRLLFECRIQADP----APTVIWSHSGVQV 153 (254)
Q Consensus 86 C~~~~~~~~~~~~~~l~v~~~~-------~~~~~~~~~~~~~~~~-~~~g~~~~l~C~~~~~~----~~~~~W~~~~~~~ 153 (254)
|.+.|..+.......+.+.... ....+..+...+.... +..|+.+.|.|.+.+.+ .+.+.|++++..+
T Consensus 196 C~a~n~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~v~~~~p~~~~~v~~G~~~~L~C~~~g~~p~P~~~~i~W~k~~~~~ 275 (434)
T 1igy_B 196 CNVAHPASSTKVDKKIVPRDCGCKPCICTVPEVSSVFIFPPKPKDTLLITVTPKVTCVVVDISKDDPEVQFSWFVDNVEV 275 (434)
T ss_dssp EEEECTTTTCCEEEECCCCCCCCCCCCCCCSSSCCEEEECCCHHHHHSTTSCCEEEEEECCCCSSCCCCCBCBBSSSCCB
T ss_pred EEEEeCCCCccceeeccCCCCCCccccCCCCcCcEEEEeCCChHHhcccCCCcEEEEEEeccccCCCCeEEEEEeCCccc
Confidence 9999998875444444332100 0001121122222222 77899999999999874 3579999998776
Q ss_pred ccCCcceEEEcCCC-CceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEecCCCCCCCCCCCCeeecCCcccccc
Q psy7036 154 KEDKRHKFSIDKDG-HSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSD 232 (254)
Q Consensus 154 ~~~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~ 232 (254)
............++ +...+.|.|.++..+|.|.|+|.|.|..+.......+.+... ...+|.+...+......
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~------~~~~P~v~~~~~~~~~~ 349 (434)
T 1igy_B 276 HTAQTQPREEQFNSTFRVVSALPIMHQDWLNGKEFKCRVNSAAFPAPIEKTISKTKG------KPRAPQVYTIPPPKEQM 349 (434)
T ss_dssp CCCSCCCCCCCCSSSCCCCCCEECCHHHHHHTCCCBCCBCCSSCSSCCCCCCCCCCS------CCBCCCCEEECCCSSSS
T ss_pred CCcccCcceeCCCCcEEEEEEEEECHHHccCCCcEEEEEECCCCCCceeEEEeccCC------CCcCCEEEEECCCHHHh
Confidence 43322111111111 122347999999999999999999998886533222322100 11245554444333455
Q ss_pred CCCCcEEEEEEEecc-CCC-ceeC
Q psy7036 233 DDLNDIVIECRLVGE-PEP-TISW 254 (254)
Q Consensus 233 ~g~~~~~l~C~~~~~-p~p-~~~W 254 (254)
.|+ .+.|.|.+.|. |++ .++|
T Consensus 350 ~~~-~~~L~C~~~g~~P~~~~v~W 372 (434)
T 1igy_B 350 AKD-KVSLTCMITDFFPEDITVEW 372 (434)
T ss_dssp SSS-EEEEEEEEEEEBCSCEEEEE
T ss_pred cCC-cEEEEEEEEeeECCCeEEEE
Confidence 678 89999999996 433 7888
No 136
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.92 E-value=7.4e-24 Score=154.33 Aligned_cols=220 Identities=11% Similarity=0.113 Sum_probs=122.3
Q ss_pred CCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEE
Q psy7036 7 FAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKV 86 (254)
Q Consensus 7 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 86 (254)
.+|.|...|. ..+.+|++|+|.|.+.+ +.+.+.|||+|..+...... ...........|.|.+++.+|+|.|+|
T Consensus 6 ~kP~i~~~P~-~~V~~G~~VtL~C~~~~-~~~~~~W~k~g~~~~~~~~~----~~~~~~~~~~~L~I~~v~~~DsG~Y~C 79 (257)
T 1b6u_A 6 RKPSLLAHPG-PLVKSEETVILQCWSDV-RFQHFLLHREGKFKDTLHLI----GEHHDGVSKANFSIGPMMQDLAGTYRC 79 (257)
T ss_dssp CCCEECCBSC-SEEESSCCEEEEEEESS-CCSEEEEEEESTTCEEEEEE----CBCCTTCEEEEEEECSCCTTTCEEEEE
T ss_pred CCCEEEEcCC-CEecCCCCEEEEEecCC-CCcEEEEEECCCCCCcceee----eeccCCCceEEEEeecCCcccCEEEEE
Confidence 4678887776 57889999999999963 56789999988644321100 000111233479999999999999999
Q ss_pred EEEcCCC-----ceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceE
Q psy7036 87 KAKNKMG-----EVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKF 161 (254)
Q Consensus 87 ~~~~~~~-----~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~ 161 (254)
.+.+... .....+.|.|... ..+|.+...+. ..+.+|+.++|.|.+.+. .+.+.|+|++..+........
T Consensus 80 ~a~~~~~~~~~s~~S~~~~L~V~~~---~~~P~l~~~p~-~~V~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~~~~~~~ 154 (257)
T 1b6u_A 80 YGSVTHSPYQLSAPSDPLDIVITGL---YEKPSLSAQPG-PTVLAGESVTLSCSSRSS-YDMYHLSREGEAHERRFSAGP 154 (257)
T ss_dssp EEECSSCTTSCCCCCCCEEEEEECS---SCCCEEECSSC-TTCBTTCEEEEEEECSSC-CSEEEEEETTSSCEECCBCBC
T ss_pred eEeccCCCccccccCCCEEEecccC---CCCcceEccCC-CccCCCCEEEEEEeCCCC-CcEEEEEECCcccCccccccc
Confidence 9986432 2234566777531 12344433333 356789999999998765 468999999876643221110
Q ss_pred EEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCC-----cceEEEEEEEecCCCCCCCCCCCCeeec-CCccccccCCC
Q psy7036 162 SIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELG-----ESNATISLNFDSDDAPVPGEGTKPVFTE-RPVTKQSDDDL 235 (254)
Q Consensus 162 ~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~~~p~~~~-~~~~~~~~~g~ 235 (254)
...+ .....|.|.+++ |+|.|+|.+.+... ..+..+.|.|... |.+.. .|.......|.
T Consensus 155 --~~~~-~~~~~l~I~~v~--D~G~Y~C~a~~~~~p~~~s~~S~pl~L~V~g~----------p~~~~p~~~~~~~~~g~ 219 (257)
T 1b6u_A 155 --KVNG-TFQADFPLGPAT--HGGTYRCFGSFRDSPYEWSNSSDPLLVSVTGN----------PSNSWPSPTEPSSETGN 219 (257)
T ss_dssp --CSSS-CCBEEEEEEECC--SCEEEEEEEECSSCTTBBCCCCCCEEECCBCC----------C----------------
T ss_pred --ccCC-ceeEEEEecccc--cCEEEEEEEEcCCCCcccccCCCCEEEEEecc----------CCCCCCCCcccCccCCC
Confidence 0000 112479999998 99999999997532 2244566666642 22221 12222344566
Q ss_pred CcEEEEEEEeccCCCceeC
Q psy7036 236 NDIVIECRLVGEPEPTISW 254 (254)
Q Consensus 236 ~~~~l~C~~~~~p~p~~~W 254 (254)
.+.|.|.+ |.+-+.|.|
T Consensus 220 -~~~l~~~~-~~~~~~~~~ 236 (257)
T 1b6u_A 220 -PRHLHAAA-EQKLISEED 236 (257)
T ss_dssp -------------------
T ss_pred -eEEEEEEE-cchHHHHHH
Confidence 88898775 444445544
No 137
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.92 E-value=1.1e-24 Score=151.65 Aligned_cols=150 Identities=13% Similarity=0.224 Sum_probs=108.3
Q ss_pred eecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEec-cCCCCCeEEEEEEEcCCCceEE
Q psy7036 19 QEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDD-VIETDAGLYKVKAKNKMGEVAA 97 (254)
Q Consensus 19 ~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~-~~~~d~G~Y~C~~~~~~~~~~~ 97 (254)
.+.+|++++|.|.+.+ + +.++|+|+|..+..... + .|.|.+ ++.+|+|.|+|.+.|..|....
T Consensus 10 v~~~G~~v~L~C~~~~-~-~~i~W~k~g~~l~~~~~--------~------~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~ 73 (186)
T 1jbj_A 10 VSISGTSVELTCPLDS-D-ENLKWEKNGQELPQKHD--------K------HLVLQDFSEVEDSGYYVCYTPASNKNTYL 73 (186)
T ss_dssp EEEETTEEEEECSSCC-C-TTCEEEETTEEECSCCC--------S------EEEEESCCTTTSCEEEEEECSSCCCCCCE
T ss_pred EEeCCcEEEEEEeCCC-C-CceEEEECCEECCCCCC--------C------EEEECCCCccccCEEEEEEEEeCCCcEEE
Confidence 4578999999999986 3 35999999998865411 1 699999 9999999999999998887555
Q ss_pred EEEEEEeccccCC------------CCCccccC----CCe---eeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCc
Q psy7036 98 SINLNFSREQIDG------------LAPTFLKK----PSI---RQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKR 158 (254)
Q Consensus 98 ~~~l~v~~~~~~~------------~~~~~~~~----~~~---~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~ 158 (254)
.+.+.|....... .++.+... ... ..+..|+.+.|.|.+ |.|.+.|+|++..+.....
T Consensus 74 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~---p~p~i~W~k~g~~i~~~~~ 150 (186)
T 1jbj_A 74 YLKARVGSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGL---TDKTIKWLKDGSIISPLNA 150 (186)
T ss_dssp EECCCCCSCCCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSS---SCSCEEEEETTEECCCSSC
T ss_pred EEEEEEecccccccccccccccccCCccccccccccccccccceecCCCCeEEEEeeC---CCCeEEEEECCEECcccCC
Confidence 5555543211100 00100000 001 123489999999998 7889999999998763321
Q ss_pred ceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcc
Q psy7036 159 HKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGES 198 (254)
Q Consensus 159 ~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~ 198 (254)
.. ..|.|.++..+|+|.|+|.|.|..|..
T Consensus 151 ------~~-----~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 151 ------TK-----NTWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp ------CS-----SCCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred ------Cc-----ceEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 11 279999999999999999999987765
No 138
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.92 E-value=5e-24 Score=153.50 Aligned_cols=175 Identities=15% Similarity=0.232 Sum_probs=120.4
Q ss_pred eCCCceeecCCCeEEEEEEEeeCCC-CceEEEeCCEE-----ee----eCCcceEEEe----------ecCCcceEEEEE
Q psy7036 13 QKPQLRQEDEGNRLIFECQLLCNPK-PDIVWFRGETQ-----LS----EDTRTVMKTT----------PIGTNKYLVALE 72 (254)
Q Consensus 13 ~~~~~~~v~~g~~v~l~C~~~~~~~-~~v~W~~~~~~-----~~----~~~~~~~~~~----------~~~~~~~~~~l~ 72 (254)
..|....+.+|+++.|.|.+.+.+. +.+.|++++.. +. ....+.-+.. ... . ..|.
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~-~---~~L~ 80 (231)
T 2pet_A 5 SVPPLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDS-Q---GRLV 80 (231)
T ss_dssp CCCSEEEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECT-T---CCEE
T ss_pred cCCCcEEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCC-C---ceEE
Confidence 4566778999999999999988774 89999975432 11 1111111111 111 1 1499
Q ss_pred EeccCCCCCeEEEEEEEcCC-CceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeE-EEEEEE-eeCCCCeEEEEEC
Q psy7036 73 LDDVIETDAGLYKVKAKNKM-GEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRL-LFECRI-QADPAPTVIWSHS 149 (254)
Q Consensus 73 i~~~~~~d~G~Y~C~~~~~~-~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~-~l~C~~-~~~~~~~~~W~~~ 149 (254)
|.+++..|+|.|+|.+.+.. +.....+.|.|...+ ..|.+...+....+..|+.+ .|.|.+ .+.|.+.+.|+++
T Consensus 81 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p---~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~~ 157 (231)
T 2pet_A 81 LAEAQVGDERDYVCVVRAGAAGTAEATARLNVFAKP---EATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYRN 157 (231)
T ss_dssp ESSCCGGGCEEEEEEEECGGGCEEEEEEEEEEEBCC---CCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSCCEEEEEET
T ss_pred EcccCcccCceEEEEEEecCCCceEEEEEEEEEecC---CCcEEecCCcceeecCCCceEEEEEEeECcccCCEEEEEEC
Confidence 99999999999999999887 667778888886422 22444444445556688887 999999 8899999999999
Q ss_pred CEecccCC----cceEEE----cCCC-CceeeEEEEccCCCCCceeEEEEEEcC
Q psy7036 150 GVQVKEDK----RHKFSI----DKDG-HSYFASLEIIDVTIEDAGKYKVTAKNE 194 (254)
Q Consensus 150 ~~~~~~~~----~~~~~~----~~~~-~~~~~~l~i~~~~~~d~G~y~C~~~~~ 194 (254)
+..+.... ...+.. ..++ +...+.|.|.....+|.|.|+|.|.|.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~ 211 (231)
T 2pet_A 158 GQRLEVPVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYS 211 (231)
T ss_dssp TEECCCCSSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEE
T ss_pred CccCccccccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcC
Confidence 99886554 222111 1111 122356888766666799999999995
No 139
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.92 E-value=8.3e-25 Score=167.15 Aligned_cols=184 Identities=17% Similarity=0.282 Sum_probs=105.9
Q ss_pred CCceeecCCCeEEEEEEE-----eeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEEEEE
Q psy7036 15 PQLRQEDEGNRLIFECQL-----LCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKVKAK 89 (254)
Q Consensus 15 ~~~~~v~~g~~v~l~C~~-----~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 89 (254)
+....+.+|+.+.|.|.+ .+.|.+.++|+|++..+..... +... +. .|.|.+++.+|+|.|+|.+.
T Consensus 127 ~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~~~~--~~~~--~~-----~L~i~~v~~~d~G~Y~C~a~ 197 (349)
T 4dep_C 127 PVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNFNN--VIPE--GM-----NLSFLIALISNNGNYTCVVT 197 (349)
T ss_dssp CEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCSCSS--EEEE--TT-----EEEEESCCGGGCEEEEEEEE
T ss_pred CcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEECCCccc--eeec--CC-----EEEEeeeeecCCcEEEEEEE
Confidence 445578899999999985 6678999999999998865422 2211 11 79999999999999999999
Q ss_pred cCC-Cce---EEEEEEEEeccccCCCCCccccCCCe--eeecCCCeEEEEEEEe----eCCCCeEEEEECCEeccc-CCc
Q psy7036 90 NKM-GEV---AASINLNFSREQIDGLAPTFLKKPSI--RQEDDGKRLLFECRIQ----ADPAPTVIWSHSGVQVKE-DKR 158 (254)
Q Consensus 90 ~~~-~~~---~~~~~l~v~~~~~~~~~~~~~~~~~~--~~~~~g~~~~l~C~~~----~~~~~~~~W~~~~~~~~~-~~~ 158 (254)
|.. +.. ...+.|.|........+|.+...... ..+..|+.+.|.|.+. +.|.+.+.|++++..+.. ...
T Consensus 198 n~~~g~~~~~~~~~~l~v~~~~~~~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~~~~~g~p~p~v~W~~~g~~l~~~~~~ 277 (349)
T 4dep_C 198 YPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITID 277 (349)
T ss_dssp EEETTEEEEEEEEEEEEEECCGGGCCSCEEC----------------CCCEEEEECCCTTCCCEEEEESSCC--------
T ss_pred EeeCCEEEEEEEEEEEEEEccCCCCCCCeEecCCCceeEEEecCCcEEEEEEEEEccCCCCCCEEEEEECCEEccccCCc
Confidence 976 443 45666776543222224554433322 2677899999999998 468899999999987754 111
Q ss_pred ceEE-----EcCCCCceeeEEEEccCCCCCc-eeEEEEEEcCCCcceEEEEEEEe
Q psy7036 159 HKFS-----IDKDGHSYFASLEIIDVTIEDA-GKYKVTAKNELGESNATISLNFD 207 (254)
Q Consensus 159 ~~~~-----~~~~~~~~~~~l~i~~~~~~d~-G~y~C~~~~~~~~~~~~~~~~v~ 207 (254)
.... ...++....+.|.|.++..+|. |.|+|.|.|..|.....+.|.|.
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~ 332 (349)
T 4dep_C 278 VTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSAKGEVAKAAKVKQK 332 (349)
T ss_dssp CCCCEEEECCTTCCEEEEECC-------------CEEEEECSSCEEEEECC----
T ss_pred cccccceeeecCCCcEEEEEEEEeeccHHHcCCcEEEEEEcCCCcEEEEEEEeee
Confidence 1110 0012222345699999999999 99999999999998888877775
No 140
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.92 E-value=7.3e-24 Score=151.47 Aligned_cols=185 Identities=10% Similarity=0.162 Sum_probs=117.8
Q ss_pred eCCCceeecCCCeEEEEEEEeeCC--CCceEEEeC--CEEee-----------------eCCcceEEEeecCCcceEEEE
Q psy7036 13 QKPQLRQEDEGNRLIFECQLLCNP--KPDIVWFRG--ETQLS-----------------EDTRTVMKTTPIGTNKYLVAL 71 (254)
Q Consensus 13 ~~~~~~~v~~g~~v~l~C~~~~~~--~~~v~W~~~--~~~~~-----------------~~~~~~~~~~~~~~~~~~~~l 71 (254)
..|....+.+|++++|.|.+.+.+ .+.+.|||+ +..+. ...++.+.... .....+|
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~---~~~~~~L 81 (219)
T 1c1e_H 5 VQSGPELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLET---SATTAYL 81 (219)
T ss_dssp EECCCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEG---GGTEEEE
T ss_pred eCCCCeEecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEec---CCCEEEE
Confidence 346677899999999999998765 678999986 33221 01222222111 1123489
Q ss_pred EEeccCCCCCeEEEEEEEcCCCc----eEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEee-CCCC-eEE
Q psy7036 72 ELDDVIETDAGLYKVKAKNKMGE----VAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQA-DPAP-TVI 145 (254)
Q Consensus 72 ~i~~~~~~d~G~Y~C~~~~~~~~----~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~-~~~ 145 (254)
.|.+++.+|+|.|+|.+.+..+. ......|.|... ...+|.+........+..|+.+.|.|.+.+ .|.| .+.
T Consensus 82 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~--~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~ 159 (219)
T 1c1e_H 82 QINNLKNEDMATYFCARGTTIVRAMDYWGQGTSLTVSSA--KTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVT 159 (219)
T ss_dssp EECSCCGGGCEEEEEEEEETTTTEEEEECCCEEEEECCC--CCBCCEEEEECCCSSSCCSSEEEEEEEEEEEBSSCCEEE
T ss_pred EECCCCcccCEEEEEEEeccCcccceeecCceEEEEecC--CCCCCeEEEecCccccccCCeEEEEEEcccccCCCeEEE
Confidence 99999999999999999987632 123456666531 112233332222224567999999999998 8888 999
Q ss_pred EEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEE
Q psy7036 146 WSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISL 204 (254)
Q Consensus 146 W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~ 204 (254)
|++++..+........ ...+.+...+.|.|..... |.|.|+|.|.|..+.......|
T Consensus 160 W~~~g~~~~~~~~~~~-~~~~~~~~~s~L~i~~~~~-d~g~Y~C~a~n~~~~~~~~~~i 216 (219)
T 1c1e_H 160 WNSGSLSSGVHTFPAV-LQSDLYTLSSSVTVPSSPR-PSETVTCNVAHPASSTKVDKKI 216 (219)
T ss_dssp EGGGTBCTTEEECCCE-ESSSCEEEEEEEEEESSST-TTSCCEEEEEEGGGTEEEEEEC
T ss_pred EEeCCcccceEecCCc-ccCCeEEEEEEEEEecccC-CCCEEEEEEEeCCCCccEEEec
Confidence 9999876532111111 1112222345788844444 5699999999988766555443
No 141
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.92 E-value=1.3e-24 Score=155.58 Aligned_cols=186 Identities=17% Similarity=0.255 Sum_probs=120.9
Q ss_pred CceeecCCCeEEEEEEEeeCCC-----CceEEEeCCEEe-----------eeCCcceEEEeecCCcceEEEEEEeccCCC
Q psy7036 16 QLRQEDEGNRLIFECQLLCNPK-----PDIVWFRGETQL-----------SEDTRTVMKTTPIGTNKYLVALELDDVIET 79 (254)
Q Consensus 16 ~~~~v~~g~~v~l~C~~~~~~~-----~~v~W~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 79 (254)
+.+.+.+|++++|.|.+.+.+. +.+.|++++... ......+.............+|.|.+++..
T Consensus 3 ~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~ 82 (222)
T 4i0k_A 3 DPVVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVT 82 (222)
T ss_dssp CCCCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGG
T ss_pred CCEEEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCcccc
Confidence 3457889999999999977643 689999986332 011111222111111112347999999999
Q ss_pred CCeEEEEEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEE-eeCCCCeEEEEEC-CEecccCC
Q psy7036 80 DAGLYKVKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRI-QADPAPTVIWSHS-GVQVKEDK 157 (254)
Q Consensus 80 d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~-~~~~~~~~~W~~~-~~~~~~~~ 157 (254)
|+|.|+|.+.+.. .....+.|.|... ...|.+...+ ...+..|+.+.|.|.+ .+.|.+.+.|+++ +..+....
T Consensus 83 D~G~Y~C~~~~~~-~~~~~~~l~V~~~---~~~p~i~~~~-~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~~~ 157 (222)
T 4i0k_A 83 DEGSYTCFVSIQD-FDSAAVSLQVAAP---YSKPSMTLEP-NKDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGNV 157 (222)
T ss_dssp GCSCEEEEEEECC-CCCCCCCCCCCBC---CCCCEEECCC------CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCSEE
T ss_pred cCEEEEEEEEeCC-CceEEEEEEEEcC---CCCCcEEeCC-CceecCCceEEEEEecccccCCCeEEEEcCCCccCCCCc
Confidence 9999999999753 3344455555421 1223333332 3356689999999998 7889999999994 44443222
Q ss_pred cceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEec
Q psy7036 158 RHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDS 208 (254)
Q Consensus 158 ~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~ 208 (254)
........++ ..+.|.|.++..+|.|.|+|.|.|..|....++.|.|..
T Consensus 158 ~~~~~~~~~~--~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 206 (222)
T 4i0k_A 158 TTSQMANERG--LFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITG 206 (222)
T ss_dssp EEEEEECTTS--CEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCC
T ss_pred ceeEEcCCCC--eEEEEEEEEEEeCCCCEEEEEEECCCCCCceEEEEEEeC
Confidence 2122222222 234688999999999999999999999999888888864
No 142
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.92 E-value=1.3e-23 Score=149.44 Aligned_cols=183 Identities=16% Similarity=0.151 Sum_probs=120.3
Q ss_pred eeEeCCCceeecCCCeEEEEEEEeeCC---CCceEEEeCC--EEe---e---------eCCcceEEEeecCCcceEEEEE
Q psy7036 10 SFTQKPQLRQEDEGNRLIFECQLLCNP---KPDIVWFRGE--TQL---S---------EDTRTVMKTTPIGTNKYLVALE 72 (254)
Q Consensus 10 ~~~~~~~~~~v~~g~~v~l~C~~~~~~---~~~v~W~~~~--~~~---~---------~~~~~~~~~~~~~~~~~~~~l~ 72 (254)
.+++ |....+.+|++++|.|.+.+.+ .+.+.|+|++ ..+ . ...++... . ....+.|.
T Consensus 3 ~v~~-p~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~--~---~~~~~~L~ 76 (212)
T 1q0x_L 3 VVTQ-ESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGS--L---IGDKAALT 76 (212)
T ss_dssp CEEE-CSEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEE--E---ETTEEEEE
T ss_pred eEEC-CCeEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEE--e---eCCEEEEE
Confidence 3556 8888999999999999998766 4789999852 222 1 01222221 1 12234899
Q ss_pred EeccCCCCCeEEEEEEEcCCCce-EEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCC--eEEEEEC
Q psy7036 73 LDDVIETDAGLYKVKAKNKMGEV-AASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAP--TVIWSHS 149 (254)
Q Consensus 73 i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~--~~~W~~~ 149 (254)
|.+++.+|+|.|.|.+.+..+.. .....|.|... ...+|.+...........|+.+.|.|.+.+.+++ .+.|+++
T Consensus 77 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~--~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~ 154 (212)
T 1q0x_L 77 ITGAQTEDEAIYFCALWSNNKLVFGGGTKLTVLGQ--PKSSPTVTLFPPSSEELSTAKATLVCTITDFYPGVVTVDWKVD 154 (212)
T ss_dssp ESSCCGGGCEEEEEEEECSSCEEECCCEEEEECCS--CCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEET
T ss_pred ECCCCccCCEEEEEEEecCchhhcCCCeEEEEecC--CCCCCeeEEeCCCHHHccCCcEEEEEEEEEEeCCCeEEEEEEC
Confidence 99999999999999999876532 22345555321 1134444332222233468899999999885433 8999999
Q ss_pred CEecccCCcc-eEEEcCCCC-ceeeEEEEccCCCCCceeEEEEEEcCCCcceE
Q psy7036 150 GVQVKEDKRH-KFSIDKDGH-SYFASLEIIDVTIEDAGKYKVTAKNELGESNA 200 (254)
Q Consensus 150 ~~~~~~~~~~-~~~~~~~~~-~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~ 200 (254)
+..+...... ......++. ...+.|.|.....+|.|.|+|.|.|......+
T Consensus 155 g~~l~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~ 207 (212)
T 1q0x_L 155 GTPVTAGMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHSSNK 207 (212)
T ss_dssp TEEECTTEEECCCEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTEEEEE
T ss_pred CEeCCCCeecCCceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCcceee
Confidence 9887644211 112222222 33457999999999999999999997655433
No 143
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.92 E-value=3.2e-23 Score=164.64 Aligned_cols=225 Identities=13% Similarity=0.163 Sum_probs=135.4
Q ss_pred ecCCCeEEEEEEEeeC-CC-C-ceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEEEEEcCCCce-
Q psy7036 20 EDEGNRLIFECQLLCN-PK-P-DIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKVKAKNKMGEV- 95 (254)
Q Consensus 20 v~~g~~v~l~C~~~~~-~~-~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~- 95 (254)
+.+|+.++|.|.+.|. |. + .|+|++++...............++.....+.|.|.++...|+|.|+|.+.|..+..
T Consensus 138 ~~~g~~v~L~C~~~g~~P~~p~~v~W~~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~ 217 (475)
T 1iga_A 138 TQPDGNVVIACLVQGFFPQEPLSVTWSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPSQ 217 (475)
T ss_pred cCCCCeEEEEEEEeeecCCCceEEEEcCCCcccceEeCCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCCce
Confidence 3689999999999886 55 4 999999875321110000000111222233468899999999999999999987632
Q ss_pred EEEEEEEEeccc-----------cCC-CCCcc-ccCCCeeeecCCCeEEEEEEEeeCCC---CeEEEEECCEecccCCcc
Q psy7036 96 AASINLNFSREQ-----------IDG-LAPTF-LKKPSIRQEDDGKRLLFECRIQADPA---PTVIWSHSGVQVKEDKRH 159 (254)
Q Consensus 96 ~~~~~l~v~~~~-----------~~~-~~~~~-~~~~~~~~~~~g~~~~l~C~~~~~~~---~~~~W~~~~~~~~~~~~~ 159 (254)
...+.+.|.... ... .+|.+ ...+....+..|+.+.|.|.+.+.++ +.+.| ++..+......
T Consensus 218 ~~~v~l~V~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~G~~v~L~C~~~g~~p~~~~~i~W--~~~~~~~~~~~ 295 (475)
T 1iga_A 218 DVTVPCPVPSTPPTPSPSTPPTPSPSCCHPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW--TPSSGKSAVQG 295 (475)
T ss_pred eeeEecccccCcccccccccccCCCCCCCcEEEEcCCChHHhccCCceEEEEEEEcccCCCceEEEE--CCCCcCCcccc
Confidence 223332231100 000 12322 22222223578999999999988754 58999 44333221111
Q ss_pred eEEEcCCC-CceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEecCCCCCCCCCCCCeeecCC-ccccccCCCCc
Q psy7036 160 KFSIDKDG-HSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDSDDAPVPGEGTKPVFTERP-VTKQSDDDLND 237 (254)
Q Consensus 160 ~~~~~~~~-~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~-~~~~~~~g~~~ 237 (254)
......++ +...+.|.|.++..+|.|.|+|.|.|..+.......|.+.. ...+|.+...+ ....+.+|+ .
T Consensus 296 ~~~~~~~g~~~~~~~L~I~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~-------~~~~P~v~~~~~~~~~v~~g~-~ 367 (475)
T 1iga_A 296 PPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTAAYPESKTPLTATLSKSG-------NTFRPEVHLLPPPSEELALNE-L 367 (475)
T ss_pred CceECCCCCEEEEEEEEEchHHhccCCcEEEEEEcCCCCCceEEEeecCC-------CCCCCeEEEECCChHHhccCC-c
Confidence 11111122 22345799999999999999999999988765444443311 12355554433 333456777 8
Q ss_pred EEEEEEEecc-CC-CceeC
Q psy7036 238 IVIECRLVGE-PE-PTISW 254 (254)
Q Consensus 238 ~~l~C~~~~~-p~-p~~~W 254 (254)
+.|.|.+.|. |+ +.++|
T Consensus 368 ~~L~C~~~g~~P~~~~v~W 386 (475)
T 1iga_A 368 VTLTCLARGFSPKDVLVRW 386 (475)
T ss_pred eEEEEEEeeeECCCCEEEE
Confidence 9999999996 43 47888
No 144
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.92 E-value=5.4e-24 Score=153.93 Aligned_cols=190 Identities=16% Similarity=0.206 Sum_probs=126.7
Q ss_pred CCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCC-----EEee---------eCCcceEEEeecCCcceEEEEEE
Q psy7036 8 APSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGE-----TQLS---------EDTRTVMKTTPIGTNKYLVALEL 73 (254)
Q Consensus 8 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~-----~~~~---------~~~~~~~~~~~~~~~~~~~~l~i 73 (254)
.+.+...|....+.+|++++|.|.+.+.+.+.+.|||++ ..+. ...++... . .....+|.|
T Consensus 24 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~--~---~~~~~~L~I 98 (237)
T 3sob_L 24 DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGS--G---SGTDFTLTI 98 (237)
T ss_dssp CCCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEE--E---ETTEEEEEE
T ss_pred cceEEeCCCeEEEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEE--c---CCCEEEEEE
Confidence 345677788889999999999999988888899999842 1111 01222222 1 112348999
Q ss_pred eccCCCCCeEEEEEEEcCCCc-eEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeC-C-CCeEEEEECC
Q psy7036 74 DDVIETDAGLYKVKAKNKMGE-VAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQAD-P-APTVIWSHSG 150 (254)
Q Consensus 74 ~~~~~~d~G~Y~C~~~~~~~~-~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-~-~~~~~W~~~~ 150 (254)
.+++.+|+|.|+|.+.+..+. ......+.|.. ...+|.+...........|+.+.|.|.+.+. | .+.+.|++++
T Consensus 99 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~---~~~~p~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g 175 (237)
T 3sob_L 99 SSLQPEDFATYYCQQSYTTPPTFGQGTKVEIKR---TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDN 175 (237)
T ss_dssp SSCCGGGCEEEEEEECSSSSCEECCCEEEEEEC---CCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETT
T ss_pred CCCChhhCeEEEEeeccCCceEEcCcEEEEEec---CCCCCceEEeCCChhhccCCceEEEEEEcccCCCceEEEEEECC
Confidence 999999999999999876653 22334556542 1234444333332333458889999999884 4 5799999999
Q ss_pred EecccCC--cceEEEcCCCC-ceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEE
Q psy7036 151 VQVKEDK--RHKFSIDKDGH-SYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLN 205 (254)
Q Consensus 151 ~~~~~~~--~~~~~~~~~~~-~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~ 205 (254)
..+.... ........++. ...+.|.|.....+|.|.|+|.|.|..........+.
T Consensus 176 ~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~ 233 (237)
T 3sob_L 176 ALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFN 233 (237)
T ss_dssp EECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSCEEEEEE
T ss_pred CCCCCceeecccccccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCCCceeeeee
Confidence 9876431 11111112222 3346789999999999999999999887665554443
No 145
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.91 E-value=2.8e-24 Score=153.40 Aligned_cols=192 Identities=15% Similarity=0.169 Sum_probs=119.6
Q ss_pred CCCCeeEeCCCcee--ecCCCeEEEEEEEeeC---C-CCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCC
Q psy7036 6 DFAPSFTQKPQLRQ--EDEGNRLIFECQLLCN---P-KPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIET 79 (254)
Q Consensus 6 ~~~p~~~~~~~~~~--v~~g~~v~l~C~~~~~---~-~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 79 (254)
...|.+...|.... +.+|++++|.|.+.+. + .+.|+|+|++..+.............+.....+.|.|.+++..
T Consensus 7 ~~~p~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~ 86 (218)
T 2rgs_A 7 EGGPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWM 86 (218)
T ss_dssp --CCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHHHHH
T ss_pred CCCCEEEEECcCHHHhhccCCCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHHHcC
Confidence 34666655555544 8899999999999876 3 3789999999876533211111111111123457999999999
Q ss_pred CCeEEEEEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEee-CCCC-eEEEEECCEecccCC
Q psy7036 80 DAGLYKVKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQA-DPAP-TVIWSHSGVQVKEDK 157 (254)
Q Consensus 80 d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~-~~~W~~~~~~~~~~~ 157 (254)
|+|.|+|.+.|..+.......+... .....+|.+...+.......|+.+.|.|.+.| .|.+ .+.|++++..+....
T Consensus 87 D~g~Y~C~~~~~~~~~~~~~~v~~~--~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~ 164 (218)
T 2rgs_A 87 SGKEFKCKVNNKDLPSPIERTISKI--KGLVRAPQVYILPPPAEQLSRKDVSLTCLVVGFNPGDISVEWTSNGHTEENYK 164 (218)
T ss_dssp TTCCEEEEEEETTCSSCEEEEECCC--CCCCBCCEEEEECCCGGGTTSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEE
T ss_pred CCCeEEEEEECCcCCCcceEEEeec--CCCCCCCEEEEECCChHHhcCCceEEEEEEEeeeCCCcEEEEEECCEeccCce
Confidence 9999999999887643122222110 01123444432222222235899999999998 5665 899999998874322
Q ss_pred cceEEEcCCCC-ceeeEEEEccCCCCCceeEEEEEEcCCCcce
Q psy7036 158 RHKFSIDKDGH-SYFASLEIIDVTIEDAGKYKVTAKNELGESN 199 (254)
Q Consensus 158 ~~~~~~~~~~~-~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~ 199 (254)
........++. ...+.|.|.....+|.|.|+|.|.|......
T Consensus 165 ~~~~~~~~~gt~~~~s~l~v~~~~~~d~g~YtC~a~n~~l~~~ 207 (218)
T 2rgs_A 165 DTAPVLDSDGSYFIYSKLNMKTSKWEKTDSFSCNVRHEGLKNY 207 (218)
T ss_dssp ECCCEECTTSCEEEEEEEEEEHHHHHHCSCEEEEEECTTSGGG
T ss_pred ecccEECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCCCc
Confidence 22222233332 3344566766666679999999999876543
No 146
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.91 E-value=7.1e-24 Score=154.96 Aligned_cols=188 Identities=18% Similarity=0.193 Sum_probs=123.2
Q ss_pred CCeeEeCCCceeecCCCeEEEEEEEeeCC-----CCceEEEeCC--EEee----------e--CCcceEEEeecCCcceE
Q psy7036 8 APSFTQKPQLRQEDEGNRLIFECQLLCNP-----KPDIVWFRGE--TQLS----------E--DTRTVMKTTPIGTNKYL 68 (254)
Q Consensus 8 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~-----~~~v~W~~~~--~~~~----------~--~~~~~~~~~~~~~~~~~ 68 (254)
.|.+...|....+.+|++++|.|.+.+.+ .+.+.|+|++ ..+. . ..++... . ....
T Consensus 38 ~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~--~---~~~~ 112 (254)
T 2c1o_A 38 ELVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGS--G---SGTD 112 (254)
T ss_dssp CCCEEEECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEE--E---ETTE
T ss_pred ceeEEeCCceEEecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCceEEEEeccccCCCccceEEEe--c---CCCE
Confidence 56777778889999999999999998876 4899999843 2110 1 1222221 1 1123
Q ss_pred EEEEEeccCCCCCeEEEEEEEcCCCceE-EEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeC-CC-CeEE
Q psy7036 69 VALELDDVIETDAGLYKVKAKNKMGEVA-ASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQAD-PA-PTVI 145 (254)
Q Consensus 69 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~-~~~~ 145 (254)
+.|.|.+++.+|+|.|+|.+.|..+... ....+.|... ..+|.+...........|+.+.|.|.+.+. |+ +.+.
T Consensus 113 ~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~---~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~ 189 (254)
T 2c1o_A 113 FTLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKRA---DAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVK 189 (254)
T ss_dssp EEEEESSCCGGGCSEEEEEECSSSSCEEBCCEEEEECCC---CBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEE
T ss_pred EEEEECcCCcccCEEEEEEEEcCcceEecCCEEEEECCC---CCCCeeEeecCChhhccCCcEEEEEEEecccCCCcEEE
Confidence 4799999999999999999998765322 2335555421 124444332222223357799999999884 44 4699
Q ss_pred EEECCEecccC-Cc-ceEEEcCCCC-ceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEE
Q psy7036 146 WSHSGVQVKED-KR-HKFSIDKDGH-SYFASLEIIDVTIEDAGKYKVTAKNELGESNATIS 203 (254)
Q Consensus 146 W~~~~~~~~~~-~~-~~~~~~~~~~-~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~ 203 (254)
|+|++..+... .. .......++. ...+.|.|.++..+|.|.|+|.|.|..........
T Consensus 190 W~k~g~~l~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~ 250 (254)
T 2c1o_A 190 WKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKS 250 (254)
T ss_dssp EEESSSEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSSCEEEE
T ss_pred EEECCCcccCcceeccccccCCCCcEEEEEEEEeccccccCCCeEEEEEEcCCCCCcceEe
Confidence 99999887544 11 1111112221 23468999999999999999999998776544433
No 147
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.91 E-value=2.2e-23 Score=174.76 Aligned_cols=217 Identities=14% Similarity=0.190 Sum_probs=119.8
Q ss_pred CCceeecCC--CeEEEEEEEeeCCCCceEEEeC--CEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEEEEEc
Q psy7036 15 PQLRQEDEG--NRLIFECQLLCNPKPDIVWFRG--ETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKVKAKN 90 (254)
Q Consensus 15 ~~~~~v~~g--~~v~l~C~~~~~~~~~v~W~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 90 (254)
+....+.+| ++++|.|.+.+ |.+.++|+++ +..+........ ..... .|.|.+++..|+|.|+|.+.+
T Consensus 133 ~~~~~v~~G~~~~v~L~C~~~~-p~~~v~w~~~~~~~~~~~~~~~~~-~~~~~------~l~i~~~~~~d~G~Y~C~~~~ 204 (772)
T 3v2a_R 133 HGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGNRIS-WDSKK------GFTIPSYMISYAGMVFCEAKI 204 (772)
T ss_dssp EEEEEEESSCCCEEEECCCCSC-SSCCEEEEEETTTEEECCCSSSCE-EETTT------EEEEEGGGTTTCSEEEEEEEE
T ss_pred ceeEEEecCCCCeEEEEccCCC-CCcEEEEEecCCCccccCCCceee-cCCCC------CeEecCCChhhCeEEEEEEEE
Confidence 455678889 89999999975 7789999997 665544332211 11111 699999999999999999997
Q ss_pred CCCceEE-EEEEEEeccccCCCCCccc-cCCCeeeecCCCeEEEEEEEee--CCCCeEEEEECCEecccCCcceEEEcC-
Q psy7036 91 KMGEVAA-SINLNFSREQIDGLAPTFL-KKPSIRQEDDGKRLLFECRIQA--DPAPTVIWSHSGVQVKEDKRHKFSIDK- 165 (254)
Q Consensus 91 ~~~~~~~-~~~l~v~~~~~~~~~~~~~-~~~~~~~~~~g~~~~l~C~~~~--~~~~~~~W~~~~~~~~~~~~~~~~~~~- 165 (254)
....... ...+.+... .++.+. .......+..|+.+.|.|.+.+ .+.+.+.|++++..+............
T Consensus 205 ~~~~~~s~~~~~~v~~~----~~~~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~ 280 (772)
T 3v2a_R 205 NDESYQSIMYIVVVVGY----RIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQ 280 (772)
T ss_dssp TTEEEECCEEEEEEECC----CEEEEEEECCSCEEEETTCCEEEEEEEEECTTCCCEEEEECC--------CEEEEC---
T ss_pred CCceEEEEEEEEEEecC----ccceeeeCCCCceEEecCCcEEEEEEEecCCCCceeEEEecCCccCCCceeeecccccc
Confidence 5443222 133333211 112222 2233357889999999999987 445689999998775432221111000
Q ss_pred ---CCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEecCCCCCCCCCCCCeeec---CCccccccCCCCcEE
Q psy7036 166 ---DGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDSDDAPVPGEGTKPVFTE---RPVTKQSDDDLNDIV 239 (254)
Q Consensus 166 ---~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~---~~~~~~~~~g~~~~~ 239 (254)
......+.|.|.+++.+|+|.|+|.+.|..+.....+.|.|.. +|.+.. .+....+.+|+ .+.
T Consensus 281 ~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~----------~p~~~~~~~~~~~~~v~~G~-~v~ 349 (772)
T 3v2a_R 281 SGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHE----------KPFVAFGSGMESLVEATVGE-RVR 349 (772)
T ss_dssp --CCCEEEEEEEEESSCCSTTCSEEEEEEECSSCEEEEEEEEEEEC----------CCC---------------------
T ss_pred ccccceEEEEEEEECcCCcCCCeEEEEEEEcCCcceeEEEEEEEeC----------CCeeEeccCCCCcEEEcCCC-cEE
Confidence 1223446899999999999999999999988877788888875 222221 22345678898 999
Q ss_pred EEEEEeccCCCceeC
Q psy7036 240 IECRLVGEPEPTISW 254 (254)
Q Consensus 240 l~C~~~~~p~p~~~W 254 (254)
|.|.+.|+|.|.+.|
T Consensus 350 l~C~~~~~p~~~v~W 364 (772)
T 3v2a_R 350 IPAKYLGYPPPEIKW 364 (772)
T ss_dssp ---------------
T ss_pred EEEEEeeeCCCeEEE
Confidence 999999999999998
No 148
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.91 E-value=7.1e-24 Score=150.15 Aligned_cols=187 Identities=13% Similarity=0.183 Sum_probs=117.4
Q ss_pred eeEeCCCcee-ecCCCeEEEEEEEeeCC----CCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEE
Q psy7036 10 SFTQKPQLRQ-EDEGNRLIFECQLLCNP----KPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLY 84 (254)
Q Consensus 10 ~~~~~~~~~~-v~~g~~v~l~C~~~~~~----~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 84 (254)
.+...|.... +.+|++++|.|.+.+.+ ...++|+|++..+.............+.....+.|.|.+++..|+|.|
T Consensus 4 v~~~~P~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y 83 (207)
T 2vol_A 4 VFIFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGKEF 83 (207)
T ss_dssp EEEECCCHHHHHSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTCCE
T ss_pred EEEeCcChhhhhccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCCEE
Confidence 3455666544 88999999999998764 348999999977643211000001111112234799999999999999
Q ss_pred EEEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeC-CC-CeEEEEECCEecccCCcceEE
Q psy7036 85 KVKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQAD-PA-PTVIWSHSGVQVKEDKRHKFS 162 (254)
Q Consensus 85 ~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~-~~~~W~~~~~~~~~~~~~~~~ 162 (254)
+|.+.+..+.......+.+. .....+|.+...+.......|+.+.|.|.+.+. |+ +.+.|+++|..+.........
T Consensus 84 ~C~a~~~~~~~~~~~~v~~~--~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~ 161 (207)
T 2vol_A 84 KCRVNSAAFPAPIEKTISKT--KGRPKAPQVYTLPPPKEQMAKDKVSLTCMITDFFPEDITVEWESNGQPAENYKNTQPI 161 (207)
T ss_dssp EEEEECTTCSSCEEEEECCC--CCCCBCCEEEEECCCTGGGSSSEEEEEEEEEEEBSSCCEEEEEETTEECSCEEECCCE
T ss_pred EEEEEccCCCCceEEEeccC--CCCCcCCeEEEeCCCHHHhcCCceEEEEEEeeEECCCCEEEEEECCEeccCcccCCce
Confidence 99999987753222233210 011234444322222222358999999999985 44 389999999987533222222
Q ss_pred EcCCCC-ceeeEEEEccCCCCCceeEEEEEEcCCCcc
Q psy7036 163 IDKDGH-SYFASLEIIDVTIEDAGKYKVTAKNELGES 198 (254)
Q Consensus 163 ~~~~~~-~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~ 198 (254)
...++. ...+.|.|.....+|.|.|+|.|.|.....
T Consensus 162 ~~~~g~~~~~s~l~i~~~~~~~~g~ytC~a~n~~l~~ 198 (207)
T 2vol_A 162 MDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGLHN 198 (207)
T ss_dssp ECTTSCEEEEEEEEEEHHHHSSCCEEEEEEECTTSGG
T ss_pred ECCCCCEEEEEEEEECHHHcCCCCEEEEEEECCCCCC
Confidence 233332 334567777766778999999999987644
No 149
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.91 E-value=1.8e-23 Score=146.43 Aligned_cols=163 Identities=15% Similarity=0.220 Sum_probs=111.9
Q ss_pred eCCCceeecCCCeEEEEEEEee-CCCCceEEEeCCEEee---eCCc-------------ceEEEeecCCcceEEEEEEec
Q psy7036 13 QKPQLRQEDEGNRLIFECQLLC-NPKPDIVWFRGETQLS---EDTR-------------TVMKTTPIGTNKYLVALELDD 75 (254)
Q Consensus 13 ~~~~~~~v~~g~~v~l~C~~~~-~~~~~v~W~~~~~~~~---~~~~-------------~~~~~~~~~~~~~~~~l~i~~ 75 (254)
..|..+.+.+|++|+|.|.+.+ .+.+.+.|++++..+. .... .++.... ..+|.|.+
T Consensus 3 ~~p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~~------~~sL~I~~ 76 (193)
T 2if7_A 3 LTPLMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQ------SYSLQLSN 76 (193)
T ss_dssp CCCEEEEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEECT------TCCEEECS
T ss_pred CCCeEEEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEECC------CeEEEECC
Confidence 3566788999999999999875 4556899999986542 1100 0122111 12799999
Q ss_pred cCCCCCeEEEEEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCC-eEEEEEEEeeC-CCCeEEEEECCEec
Q psy7036 76 VIETDAGLYKVKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGK-RLLFECRIQAD-PAPTVIWSHSGVQV 153 (254)
Q Consensus 76 ~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~-~~~l~C~~~~~-~~~~~~W~~~~~~~ 153 (254)
++..|+|.|+|.+.+..+.....+.|.|.... ..|.+.... .....|. .+.|.|.+.+. |.+.+.|++++..+
T Consensus 77 v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~~---~~p~i~~~~--~~~~~g~~~v~L~C~~~g~~p~p~i~W~~~g~~l 151 (193)
T 2if7_A 77 LKMEDTGSYRAQISTKTSAKLSSYTLRILRQL---RNIQVTNHS--QLFQNMTCELHLTCSVEDADDNVSFRWEALGNTL 151 (193)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEEEEECCC---EEEEEEECC--C---CSSEEEEEEEEEESCCTTCEEEEEETTEEE
T ss_pred CCcccCceEEEEEEecCCCeEEEEEEEEEccC---CCCeEecCc--eeecCCCceEEEEEEEecCCCceEEEEEeCCEEc
Confidence 99999999999999988776667788886311 112222222 1123455 89999999985 57899999998765
Q ss_pred ccCCcceEEEcCCCCceeeEEEEccCCCC-CceeEEEEEEcCCCcceEE
Q psy7036 154 KEDKRHKFSIDKDGHSYFASLEIIDVTIE-DAGKYKVTAKNELGESNAT 201 (254)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~l~i~~~~~~-d~G~y~C~~~~~~~~~~~~ 201 (254)
... . .|.|.....+ |.|.|+|.|.|..|..+..
T Consensus 152 ~~~----------~-----~l~i~~~~~~~d~G~Y~C~a~N~~g~~s~~ 185 (193)
T 2if7_A 152 SSQ----------P-----NLTVSWDPRISSEQDYTCIAENAVSNLSFS 185 (193)
T ss_dssp ESS----------S-----EEEEEECTTTCSCCEEEEEEEETTEEEEEE
T ss_pred CCC----------C-----eEEEEeccCcCCCCcEEEEEECCCCccccc
Confidence 321 1 4666544444 8999999999999877554
No 150
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.91 E-value=3e-23 Score=157.33 Aligned_cols=183 Identities=16% Similarity=0.220 Sum_probs=133.0
Q ss_pred CCCee--EeCCCceeecCC---CeEEEEEE-EeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCC
Q psy7036 7 FAPSF--TQKPQLRQEDEG---NRLIFECQ-LLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETD 80 (254)
Q Consensus 7 ~~p~~--~~~~~~~~v~~g---~~v~l~C~-~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d 80 (254)
.+|.+ ...+....+.+| +.++|.|. ..+.|.+.++|++++...... .......+.......|.|.+++..|
T Consensus 129 ~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~---~~~~~~~~~~~~~~~L~i~~~~~~d 205 (331)
T 3u83_A 129 AKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETRLKGEAEY---QEIRNPNGTVTVISRYRLVPSREAH 205 (331)
T ss_dssp BCCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCCEEEEEESSCCEEEE---EEEECTTSCEEEEEEEEECCCGGGT
T ss_pred cCCcceeecCCCceeecCCCccceEEEEEEecCCcCCceEEEEcCCCCcccc---ceeECCCCcEEEEEEEEEEeccccC
Confidence 34544 235566678888 78999998 778899999999953221110 0111112222233479999999999
Q ss_pred CeEEEEEEEcCCCceEEEEEEEEeccccCCCCCccc-cCCCeeeecCCCeEEEEEEEeeCCCCe-EEEEECCEecccCCc
Q psy7036 81 AGLYKVKAKNKMGEVAASINLNFSREQIDGLAPTFL-KKPSIRQEDDGKRLLFECRIQADPAPT-VIWSHSGVQVKEDKR 158 (254)
Q Consensus 81 ~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~-~~~~~~~~~~g~~~~l~C~~~~~~~~~-~~W~~~~~~~~~~~~ 158 (254)
+|.|+|.+.|..+.....+.|.|.. +|.+. .......+..|+.+.|.|.+.+.|.+. +.|++++..+....
T Consensus 206 ~G~Y~C~a~n~~~~~~~~~~l~V~~------~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~i~W~~~~~~~~~~~- 278 (331)
T 3u83_A 206 QQSLACIVNYHMDRFKESLTLNVQY------EPEVTIEGFDGNWYLQRMDVKLTCKADANPPATEYHWTTLNGSLPKGV- 278 (331)
T ss_dssp TCEEEEEEEETTEEEEEEEECCEEE------EEEEEEECCCSCCBTTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTE-
T ss_pred CCEEEEEEecCCCcceeeEEEEEec------CCeEEEecCCCceEeCCCeEEEEEeCcCCCCCCEEEEEECCCcccccc-
Confidence 9999999999988877777777753 33332 223334577899999999999999998 99999998775331
Q ss_pred ceEEEcCCCCceeeEEEEc-cCCCCCceeEEEEEEcCCCcceEEEEEEEec
Q psy7036 159 HKFSIDKDGHSYFASLEII-DVTIEDAGKYKVTAKNELGESNATISLNFDS 208 (254)
Q Consensus 159 ~~~~~~~~~~~~~~~l~i~-~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~ 208 (254)
... ++ .|.|. ++..+|.|.|+|.|.|..|.....+.|.|..
T Consensus 279 ---~~~-~~-----~L~i~~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 320 (331)
T 3u83_A 279 ---EAQ-NR-----TLFFKGPINYSLAGTYICEATNPIGTRSGQVEVNITE 320 (331)
T ss_dssp ---EEE-TT-----EEEECSCCCGGGCEEEEEEEEETTEEEEEEEEECCBC
T ss_pred ---eec-Cc-----EEEEeCCCccccCeEEEEEEEeccccceEEEEEEEec
Confidence 111 22 79999 8999999999999999999988888888775
No 151
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.91 E-value=2.4e-23 Score=149.12 Aligned_cols=186 Identities=11% Similarity=0.162 Sum_probs=119.3
Q ss_pred CCCceeecCCCeEEEEEEEeeCC--CCceEEEeCC--EE---ee----e----------CCcceEEEeecCCcceEEEEE
Q psy7036 14 KPQLRQEDEGNRLIFECQLLCNP--KPDIVWFRGE--TQ---LS----E----------DTRTVMKTTPIGTNKYLVALE 72 (254)
Q Consensus 14 ~~~~~~v~~g~~v~l~C~~~~~~--~~~v~W~~~~--~~---~~----~----------~~~~~~~~~~~~~~~~~~~l~ 72 (254)
.|....+.+|++++|.|.+.+.+ .+.+.|||++ .. +. . ....++....+. .....+|.
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~-~~~~~~L~ 84 (222)
T 1q9r_B 6 ESGGGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDN-SQSILYLQ 84 (222)
T ss_dssp EECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEET-TTTEEEEE
T ss_pred cCCceeEcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEEC-CCCeEEEE
Confidence 34566899999999999998755 6789999843 11 10 0 001122222111 12245899
Q ss_pred EeccCCCCCeEEEEEEEcCCC-----ceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeC-CCC-eEE
Q psy7036 73 LDDVIETDAGLYKVKAKNKMG-----EVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQAD-PAP-TVI 145 (254)
Q Consensus 73 i~~~~~~d~G~Y~C~~~~~~~-----~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~-~~~ 145 (254)
|.+++.+|+|.|.|.+.+..+ .......|.|... ...+|.+........+..|+.+.|.|.+.+. |.+ .+.
T Consensus 85 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~--~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~ 162 (222)
T 1q9r_B 85 MNTLRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAA--KTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVT 162 (222)
T ss_dssp ECSCCGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSS--CCBCCEEEEECCCSCCCCSSEEEEEEEEEEEBSSCCEEE
T ss_pred ECcCCcccCeEEEEEEeccCCcccceEeCCceEEEeccC--CCCCCeEEEccccccccCCCcEEEEEEEccEECCCCEEE
Confidence 999999999999999998654 2223456666531 1123433322222234579999999999985 887 999
Q ss_pred EEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEE
Q psy7036 146 WSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISL 204 (254)
Q Consensus 146 W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~ 204 (254)
|++++..+.... .......+.+...+.|.|.+...+| |.|+|.|.|..+.......|
T Consensus 163 W~~~g~~~~~~~-~~~~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~~~~~~~i 219 (222)
T 1q9r_B 163 WNSGSLSSGVHT-FPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKI 219 (222)
T ss_dssp EGGGTBCTTEEE-EEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEEEC
T ss_pred EecCCeEcceEe-ccccccCCcEEEEEEEEECchhcCC-CeEEEEEEccCCCCcEEEec
Confidence 999987654221 1111111222234579999999889 99999999998876655544
No 152
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.91 E-value=2.3e-22 Score=146.31 Aligned_cols=193 Identities=15% Similarity=0.214 Sum_probs=121.8
Q ss_pred CeeEeCCCceeecCCCeEEEEEEEeeCC--CCceEEEeCC--EE---ee--------------eCCcceEEEeecCCcce
Q psy7036 9 PSFTQKPQLRQEDEGNRLIFECQLLCNP--KPDIVWFRGE--TQ---LS--------------EDTRTVMKTTPIGTNKY 67 (254)
Q Consensus 9 p~~~~~~~~~~v~~g~~v~l~C~~~~~~--~~~v~W~~~~--~~---~~--------------~~~~~~~~~~~~~~~~~ 67 (254)
+.+... ....+.+|++++|.|.+.+.| .+.+.|+|++ .. +. ...++.+... ....
T Consensus 4 ~~v~~p-~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~---~~~~ 79 (247)
T 2ghw_B 4 VQLVQS-GGGVVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRD---NSKN 79 (247)
T ss_dssp CEEEEE-CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEE---TTTT
T ss_pred eEEEec-CCEEEecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEe---CCCC
Confidence 344444 557899999999999998876 6789999842 11 10 0122222211 1122
Q ss_pred EEEEEEeccCCCCCeEEEEEEEcCCCc--eEEEEEEEEecccc---------CCCCCccccCCCeeeecCCCeEEEEEEE
Q psy7036 68 LVALELDDVIETDAGLYKVKAKNKMGE--VAASINLNFSREQI---------DGLAPTFLKKPSIRQEDDGKRLLFECRI 136 (254)
Q Consensus 68 ~~~l~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~~l~v~~~~~---------~~~~~~~~~~~~~~~~~~g~~~~l~C~~ 136 (254)
..+|.|.+++.+|+|.|+|.+.|..+. ......|.|..... ...++.+...+....+.+|+.++|.|.+
T Consensus 80 ~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~ 159 (247)
T 2ghw_B 80 TLYLQMNSLRAEDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERATLSCRA 159 (247)
T ss_dssp EEEEEECSCCGGGCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEECTTSCEEEEEEE
T ss_pred EEEEEECcCCHHHCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCCcEEEEEEe
Confidence 347999999999999999999987322 22344667653210 0123333444556678899999999999
Q ss_pred eeCCCCeEEEEE--CCEecc----------cCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcc-eEEEE
Q psy7036 137 QADPAPTVIWSH--SGVQVK----------EDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGES-NATIS 203 (254)
Q Consensus 137 ~~~~~~~~~W~~--~~~~~~----------~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~-~~~~~ 203 (254)
.+.+.+.+.|+| ++..+. .....++...... ....|.|.+++.+|+|.|+|.|.|..... .....
T Consensus 160 ~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~g~~t~ 237 (247)
T 2ghw_B 160 SQSVRSNLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSG--TDFTLTISRLEPEDFAVYYCQQRSNWPPTFGQGTK 237 (247)
T ss_dssp SSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEECSS--SEEEEEECSCCGGGCEEEEEEECSSSSCEECCCEE
T ss_pred CCCccceEEEEEECCCCCcEEEEEEeccCCCccCCCEEEecCC--CeEEEEECcCCHHHCEEEEEEEccCCCceEcCCEE
Confidence 999888999999 444321 0011122222111 12379999999999999999999854322 23344
Q ss_pred EEEe
Q psy7036 204 LNFD 207 (254)
Q Consensus 204 ~~v~ 207 (254)
|.|.
T Consensus 238 l~V~ 241 (247)
T 2ghw_B 238 VEVK 241 (247)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 5554
No 153
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.91 E-value=2.6e-23 Score=157.45 Aligned_cols=175 Identities=12% Similarity=0.138 Sum_probs=112.4
Q ss_pred eeecCCCeEEEEEEEeeCCCC--ceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEEEEEcCCCce
Q psy7036 18 RQEDEGNRLIFECQLLCNPKP--DIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKVKAKNKMGEV 95 (254)
Q Consensus 18 ~~v~~g~~v~l~C~~~~~~~~--~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~ 95 (254)
..+.+|+.+.|.|.+.+.|.+ .++|+++|..+.............+.....+.|.|.....+|.|.|+|.+.|..+..
T Consensus 127 ~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~ 206 (327)
T 2wng_A 127 ARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQG 206 (327)
T ss_dssp SCBCTTCEEEEEEEEEEEBSSCCEEEEEETTEECCCEEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCS
T ss_pred cccCCCCEEEEEEEEeCccCCCcEEEEEECCEEccccccccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccCC
Confidence 567899999999999887655 899999999886443211111111222233468888777777899999999987652
Q ss_pred ---EEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCC-CC-eEEEEECCEecccCCcceEEEcCCCC-c
Q psy7036 96 ---AASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADP-AP-TVIWSHSGVQVKEDKRHKFSIDKDGH-S 169 (254)
Q Consensus 96 ---~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~-~~-~~~W~~~~~~~~~~~~~~~~~~~~~~-~ 169 (254)
.....+.+. ...+|.+...+.. +.+|+.+.|.|.+.+.+ ++ .+.|+++|..+............++. .
T Consensus 207 ~~~~~~~~~~~~----v~~~P~i~~~~~~--~~~G~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~ 280 (327)
T 2wng_A 207 DPLRGTANLSET----IRVPPTLEVTQQP--VRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETASTVTENKDGTYN 280 (327)
T ss_dssp CCEEEEEEGGGT----BCBCCEEEEEEEC--CSSTTCCEEEEEEEEEBSSCEEEEEEETTEEEEEEECCSCEECTTSCEE
T ss_pred CcccceEEeccc----cCCCCEEEEecCC--cCCCCcEEEEEEEccccCCCcEEEEEECCeEccCcccCceEECCCCcEE
Confidence 223333221 1244544332222 66899999999999854 44 79999999987654333333333432 3
Q ss_pred eeeEEEEccCCCCCceeEEEEEEcCCCcc
Q psy7036 170 YFASLEIIDVTIEDAGKYKVTAKNELGES 198 (254)
Q Consensus 170 ~~~~l~i~~~~~~d~G~y~C~~~~~~~~~ 198 (254)
..+.|.|..+..+|.|.|+|.|.|..+..
T Consensus 281 ~~~~L~i~~~~~~d~G~Y~C~a~N~~~~~ 309 (327)
T 2wng_A 281 WMSWLLVNVSAHRDDVKLTCQVEHDGQPA 309 (327)
T ss_dssp EEEEEEC-------CCEEEEEEEETTCCC
T ss_pred EEEEEEEccccccCCCEEEEEEEeCCCCC
Confidence 34578999999999999999999998865
No 154
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.91 E-value=2.2e-23 Score=148.69 Aligned_cols=185 Identities=16% Similarity=0.179 Sum_probs=118.8
Q ss_pred eEeCCCceeecCCCeEEEEEEEee-CC-CCceEEEeCC--EEe---e-------e--CCcceEEEeecCCcceEEEEEEe
Q psy7036 11 FTQKPQLRQEDEGNRLIFECQLLC-NP-KPDIVWFRGE--TQL---S-------E--DTRTVMKTTPIGTNKYLVALELD 74 (254)
Q Consensus 11 ~~~~~~~~~v~~g~~v~l~C~~~~-~~-~~~v~W~~~~--~~~---~-------~--~~~~~~~~~~~~~~~~~~~l~i~ 74 (254)
+.+ |....+.+|++++|.|.+.+ .+ .+.+.|+|++ ..+ . . ..++... . ....+.|.|.
T Consensus 4 v~q-p~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~--~---~~~~~~L~I~ 77 (216)
T 2xzc_L 4 LTQ-PPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGS--K---SGTSATLGIT 77 (216)
T ss_dssp BBC-CSEEEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEE--E---ETTEEEEEEC
T ss_pred EEC-CCcEEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEe--c---cCCEEEEEEC
Confidence 344 67788999999999999643 32 5789999853 111 1 0 1122221 1 1223479999
Q ss_pred ccCCCCCeEEEEEEEcCCC--ceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEee-CCCC-eEEEEECC
Q psy7036 75 DVIETDAGLYKVKAKNKMG--EVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQA-DPAP-TVIWSHSG 150 (254)
Q Consensus 75 ~~~~~d~G~Y~C~~~~~~~--~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~-~~~W~~~~ 150 (254)
+++.+|+|.|+|.+.+..+ .......|.|... ..+|.+...........|+.+.|.|.+.+ .|.+ .+.|++++
T Consensus 78 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~---~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g 154 (216)
T 2xzc_L 78 GLQTGDEADYYCGTWDSSLNPVFGGGTKLEIKRT---VAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDN 154 (216)
T ss_dssp SCCGGGCEEEEEEEECTTSCEEEBCCEEEEECCC---CBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETT
T ss_pred CCCcccCEEEEEEEEeCCCcceECCCEEEEEcCC---CCCCceEEeCCChhhccCCcEEEEEEEEeEcCCceEEEEEECC
Confidence 9999999999999998775 1222345666321 13444333222112235889999999988 4554 89999999
Q ss_pred EecccC-Cc-ceEEEcCCC-CceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEE
Q psy7036 151 VQVKED-KR-HKFSIDKDG-HSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISL 204 (254)
Q Consensus 151 ~~~~~~-~~-~~~~~~~~~-~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~ 204 (254)
..+... .. .......++ +...+.|.|.....+|.|.|+|.|.|..........+
T Consensus 155 ~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~i 211 (216)
T 2xzc_L 155 ALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSF 211 (216)
T ss_dssp EECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSCEEEEE
T ss_pred eecCCCeeEecCcccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCCCceEEec
Confidence 987544 11 111111222 2334689999999999999999999987665554444
No 155
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.91 E-value=6.9e-25 Score=156.02 Aligned_cols=181 Identities=15% Similarity=0.192 Sum_probs=119.3
Q ss_pred eEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeC--CEEee---e---------CCcceEEEeecCCcceEEEEEEecc
Q psy7036 11 FTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRG--ETQLS---E---------DTRTVMKTTPIGTNKYLVALELDDV 76 (254)
Q Consensus 11 ~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~--~~~~~---~---------~~~~~~~~~~~~~~~~~~~l~i~~~ 76 (254)
+.+ |....+.+|++++|.|.+.+.+.+.+.|||+ +..+. . ..++.+.. ......|.|.++
T Consensus 3 v~q-p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~-----~~~~~~L~I~~v 76 (212)
T 1nfd_E 3 LIQ-PSSASVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGST-----SGTTATLTISGA 76 (212)
T ss_dssp EEC-CSEEEEETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEE-----ETTEEEEEETTC
T ss_pred eEC-CCeEEEeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEe-----eCCEEEEEECcC
Confidence 445 7788899999999999988777778999984 22221 0 12222221 112347999999
Q ss_pred CCCCCeEEEEEEEcCCC-c--eEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeC-CC-CeEEEEECCE
Q psy7036 77 IETDAGLYKVKAKNKMG-E--VAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQAD-PA-PTVIWSHSGV 151 (254)
Q Consensus 77 ~~~d~G~Y~C~~~~~~~-~--~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~-~~~~W~~~~~ 151 (254)
+.+|+|.|+|.+.|..+ . ......|.|... ...+|.+...........|+.+.|.|.+.+. |+ +.+.|++++.
T Consensus 77 ~~~D~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~--~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~ 154 (212)
T 1nfd_E 77 QPEDEAAYYCLSSYGDNNDLVFGSGTQLTVLRG--PKSSPKVTVFPPSPEELRTNKATLVCLVNDFYPGSATVTWKANGA 154 (212)
T ss_dssp CGGGCSEEEEEEEETTTTEEEECCCEEEEEECC--CCBCCEEECCCCCHHHHHTTEECCCEEEEEEBSSCCEEEEEETTE
T ss_pred CcccCEEEEEEEEcccCcccccCCceEEEEccC--CCCCCEEEeeCCchHhccCCceEEEEEEEeeECCccEEEEEECCe
Confidence 99999999999996322 1 122345555321 1134444433333334568899999999886 54 7999999998
Q ss_pred ecccCCcce-EEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcce
Q psy7036 152 QVKEDKRHK-FSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESN 199 (254)
Q Consensus 152 ~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~ 199 (254)
.+....... .....+++...+.|.|.++..+|.|.|+|.|.|..+...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~ 203 (212)
T 1nfd_E 155 TINDGVKTTKPSKQGQNYMTSSYLSLTADQWKSHNRVSCQVTHEGETVE 203 (212)
T ss_dssp EECSSCBCCCCBCSSSCEEEEEBCCEEHHHHHTCSCEEEEEECTTTTCC
T ss_pred EcCCCeecCCceecCCCceEEEEEEEchhhcCCCCeEEEEEEeCCceEE
Confidence 876442211 111122222235699999999999999999999876533
No 156
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.91 E-value=1.7e-23 Score=152.46 Aligned_cols=187 Identities=10% Similarity=0.134 Sum_probs=117.0
Q ss_pred eCCCceeecCCCeEEEEEEEeeCCCCc-----eEEEeCCEEee------eCCcceEEEeec-------CCcceEEEEEEe
Q psy7036 13 QKPQLRQEDEGNRLIFECQLLCNPKPD-----IVWFRGETQLS------EDTRTVMKTTPI-------GTNKYLVALELD 74 (254)
Q Consensus 13 ~~~~~~~v~~g~~v~l~C~~~~~~~~~-----v~W~~~~~~~~------~~~~~~~~~~~~-------~~~~~~~~l~i~ 74 (254)
..|....+.+|++++|.|.+.+.|.+. +.|++++.... ............ .......+|.|.
T Consensus 8 ~~p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~ 87 (248)
T 3pv7_A 8 MAGGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLP 87 (248)
T ss_dssp STTSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEES
T ss_pred eCCCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeC
Confidence 455667889999999999998877665 99999632110 000000000000 001123369999
Q ss_pred ccCCCCCeEEEEEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEee-CCCC-eEEEEECCEe
Q psy7036 75 DVIETDAGLYKVKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQA-DPAP-TVIWSHSGVQ 152 (254)
Q Consensus 75 ~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~-~~~W~~~~~~ 152 (254)
+++..|+|.|+|.+.+..+.....+.|.|.. +|.+...+. .....|..+.|.|.+.+ .|.+ .+.|++++..
T Consensus 88 ~v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~------~P~v~~~~~-~~~~~~~~~~L~C~~~g~~P~pi~v~W~k~g~~ 160 (248)
T 3pv7_A 88 GIQLEEAGEYRCEVVVTPLKAQGTVQLEVVA------SPASRLLLD-QVGMKENEDKYMCESSGFYPEAINITWEKQTQK 160 (248)
T ss_dssp SCCGGGCEEEEEEEEETTEEEEEEEEEEEEB------CCEEEEECC---------CEEEEEEEEEBSSCCEEEEEEECSS
T ss_pred CCCHHHCeEEEEEEEeCCccceeEEEEEEec------CCceEEecC-CccccCCCcEEEEEEccEECCCeEEEEEECCcc
Confidence 9999999999999999887777788888863 444333322 22345777889999998 7888 9999999865
Q ss_pred cccCC------c-ceEEEcCCCC-ceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEE
Q psy7036 153 VKEDK------R-HKFSIDKDGH-SYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNF 206 (254)
Q Consensus 153 ~~~~~------~-~~~~~~~~~~-~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v 206 (254)
+.... . .......++. ...+.|.|.....+|.|.|+|.|.|..+.......+.+
T Consensus 161 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~~~~~~~~~~v~l 222 (248)
T 3pv7_A 161 FPHPIEISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHASLHTPLRSNFTL 222 (248)
T ss_dssp SCSCEEECTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEECTTCSSCEEEEECC
T ss_pred CCCccccccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEECCCCCCCcEEEEEE
Confidence 43210 0 1122222222 33467888899999999999999999887544444333
No 157
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.91 E-value=2.3e-23 Score=147.93 Aligned_cols=181 Identities=13% Similarity=0.169 Sum_probs=116.6
Q ss_pred CCCceeecCCCeEEEEEEEeeCC--CCceEEEeC--CEEe----e------------eCCcceEEEeecCCcceEEEEEE
Q psy7036 14 KPQLRQEDEGNRLIFECQLLCNP--KPDIVWFRG--ETQL----S------------EDTRTVMKTTPIGTNKYLVALEL 73 (254)
Q Consensus 14 ~~~~~~v~~g~~v~l~C~~~~~~--~~~v~W~~~--~~~~----~------------~~~~~~~~~~~~~~~~~~~~l~i 73 (254)
.|....+.+|++++|.|.+.+.+ .+.+.|+|+ +... . ...++.+.... ....++|.|
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~---~~~~~~L~I 82 (210)
T 3d9a_H 6 ESGPSLVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDT---SKNQYYLDL 82 (210)
T ss_dssp EESCSEECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEG---GGTEEEEEE
T ss_pred cCCCEEecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecC---CCCEEEEEE
Confidence 35667899999999999998765 478999985 2211 1 11222222211 112348999
Q ss_pred eccCCCCCeEEEEEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeC-CCC-eEEEEECCE
Q psy7036 74 DDVIETDAGLYKVKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQAD-PAP-TVIWSHSGV 151 (254)
Q Consensus 74 ~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~-~~~W~~~~~ 151 (254)
.+++.+|+|.|.|.+.+.. .......|.|... ...+|.+........+..|+.+.|.|.+.+. |.+ .+.|++++.
T Consensus 83 ~~v~~~D~G~Y~C~~~~~~-~~~~~~~l~V~~~--~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~ 159 (210)
T 3d9a_H 83 NSVTTEDTATYYCANWDGD-YWGQGTLVTVSAA--KTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSL 159 (210)
T ss_dssp CSCCGGGCEEEEEEETTSS-CBCCCEEEEECCC--CCBCCEEEEECCTTSCCCSSEEEEEEEEEEEBSSCCEEEEGGGTB
T ss_pred CCCCcccCEEEEEEEecCc-ccccceEEEeccC--CCCCCEEEEecCCcccccCCcEEEEEEEeeEecCCcEEEEeeCCc
Confidence 9999999999999998863 2222345666421 1123333322222335679999999999886 877 999999987
Q ss_pred ecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEE
Q psy7036 152 QVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATI 202 (254)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~ 202 (254)
.+......... ........+.|.|.....+| |.|+|.|.|..+......
T Consensus 160 ~~~~~~~~~~~-~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~ 208 (210)
T 3d9a_H 160 SSGVHTFPAVL-QSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDK 208 (210)
T ss_dssp CTTEEECCCEE-ETTEEEEEEEEEEEGGGTTT-SCCEEEEEEGGGTEEEEE
T ss_pred ccceEEcCCcc-CCCcEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCccccc
Confidence 64321111111 11112234579999888877 999999999988765443
No 158
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.91 E-value=3.7e-23 Score=145.80 Aligned_cols=172 Identities=12% Similarity=0.127 Sum_probs=115.8
Q ss_pred CCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEE
Q psy7036 7 FAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKV 86 (254)
Q Consensus 7 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 86 (254)
.+|.|...|. ..+.+|++|+|.|.+. .+.+.+.|||+|..+........ . ........|.|.+++.+|+|.|+|
T Consensus 7 ~~P~i~~~p~-~~v~~G~~v~L~C~~~-~~~~~~~w~k~g~~~~~~~~~~~-~---~~~~~~~~l~I~~v~~~D~G~Y~C 80 (201)
T 1nkr_A 7 RKPSLLAHPG-PLVKSEETVILQCWSD-VMFEHFLLHREGMFNDTLRLIGE-H---HDGVSKANFSISRMTQDLAGTYRC 80 (201)
T ss_dssp CCCEEEEESC-SEEETTCCEEEEEEES-SCCSEEEEEEESSSCEEEEEECE-E---ETTEEEEEEEESSCCGGGCEEEEE
T ss_pred CCCeEEEEcC-CccCCCCcEEEEEecc-CCCCEEEEEECCCcCCcceeeee-c---CCCCceEEEEeccCCcccCeEEEE
Confidence 4678888776 6788999999999997 46789999999875532111000 0 011123379999999999999999
Q ss_pred EEEcCCC-----ceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceE
Q psy7036 87 KAKNKMG-----EVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKF 161 (254)
Q Consensus 87 ~~~~~~~-----~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~ 161 (254)
.+.+... .....+.|.|... ..+|.+...+. ..+.+|+.++|.|.+.+ +.+.+.|+|++..+........
T Consensus 81 ~a~~~~~~~~~~~~s~~~~l~V~~~---~~~p~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~ 155 (201)
T 1nkr_A 81 YGSVTHSPYQVSAPSDPLDIVIIGL---YEKPSLSAQPG-PTVLAGENVTLSCSSRS-SYDMYHLSREGEAHERRLPAGP 155 (201)
T ss_dssp EEEBTTBTTCCCCCCCCEEEEEECS---SCCCEEEEESC-SEECTTCEEEEEEEESS-CCSEEEEEETTCSSCEEEECEE
T ss_pred eEecCCCCccccCCCCCEEEEeecc---CCCCceecCCC-CccCCCCeEEEEEeCCC-CCceEEEEECCcccCccccccc
Confidence 9986431 2234556676531 12344433333 35789999999999875 5678999999876643211111
Q ss_pred EEcCCCCceeeEEEEccCCCCCceeEEEEEEcC
Q psy7036 162 SIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNE 194 (254)
Q Consensus 162 ~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~ 194 (254)
.. .+ .....|.|.+++ |+|.|+|.|.+.
T Consensus 156 ~~--~~-~~~~~L~i~~v~--d~G~Y~C~a~~~ 183 (201)
T 1nkr_A 156 KV--NG-TFQADFPLGPAT--HGGTYRCFGSFH 183 (201)
T ss_dssp EE--TT-EEEEEEEEEECC--SCEEEEEEEEET
T ss_pred cc--CC-ceEEEEEeCCcC--CCeeEEEEEEcC
Confidence 11 11 112479999998 999999999865
No 159
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.91 E-value=3.2e-23 Score=149.88 Aligned_cols=181 Identities=14% Similarity=0.128 Sum_probs=125.0
Q ss_pred CCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEE
Q psy7036 7 FAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKV 86 (254)
Q Consensus 7 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 86 (254)
.+|.|...|.. .+.+|++|+|.|.+.+ +...+.|||++..+....... ........|.|.+++.+|+|.|+|
T Consensus 6 ~kP~i~~~P~~-~v~~G~~VtL~C~~~~-~~~~~~w~k~g~~~~~~~~~~------~~~~~~~~L~I~~v~~~DsG~Y~C 77 (242)
T 1p6f_A 6 PKPFIWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPKP------PERINKVKFYIPDMNSRMAGQYSC 77 (242)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECCSS------CTTCCEEEEEECSCCGGGCEEEEE
T ss_pred CCCEEEeeCCC-ccCCCCcEEEEEeeCC-CCcEEEEEECCCccccccccc------cCCcceeEEEecCCCcccCeEEEE
Confidence 47888888877 7899999999999864 456899999998765211100 011123379999999999999999
Q ss_pred EEEcCCCc--eEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEc
Q psy7036 87 KAKNKMGE--VAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSID 164 (254)
Q Consensus 87 ~~~~~~~~--~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~ 164 (254)
.+.+..+. ....+.|.|... ...|.+...+ ...+.+|+.++|.|.+.+. .+.+.|+|++..+.. .....
T Consensus 78 ~~~~~~~~s~~S~~~~L~V~~~---~~~P~i~~~p-~~~v~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~----~~~~~ 148 (242)
T 1p6f_A 78 IYRVGELWSEPSNLLDLVVTEM---YDTPTLSVHP-GPEVISGEKVTFYCRLDTA-TSMFLLLKEGRSSHV----QRGYG 148 (242)
T ss_dssp EEEETTEECCCCCCEEEEEECC---SCCCEEEEES-CSEEETTCEEEEEEECTTS-CSEEEEEECSSSCEE----EEEEC
T ss_pred EEecCCccccCCcceEEEeecc---cCCCceEccC-CCccCCCCcEEEEEecCCC-CCEEEEEECCCccCc----cccCC
Confidence 99875432 234566666531 1234433333 2357789999999998654 458999999876542 11111
Q ss_pred CCCCceeeEEEEccCCCCCceeEEEEEEcCC---CcceEEEEEEEec
Q psy7036 165 KDGHSYFASLEIIDVTIEDAGKYKVTAKNEL---GESNATISLNFDS 208 (254)
Q Consensus 165 ~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~---~~~~~~~~~~v~~ 208 (254)
. ....|.|.+++.+|+|.|+|.+.|.. ...+..+.|.|..
T Consensus 149 ~----~~~~l~I~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~~ 191 (242)
T 1p6f_A 149 K----VQAEFPLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVTG 191 (242)
T ss_dssp S----SEEEEEEEECCGGGCEEEEEEEEEETTEECCCCCCEEEEEEC
T ss_pred C----ceEEEEeCCCccccCEEEEEEEECCCCcccCCCCCEEEEEec
Confidence 1 12379999999999999999999864 2335566677764
No 160
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.91 E-value=9.6e-24 Score=157.29 Aligned_cols=190 Identities=16% Similarity=0.169 Sum_probs=134.3
Q ss_pred CCCCe-eEeCCCceeecCCCeEEEEEEEeeCCC--CceEEEeC-CEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCC
Q psy7036 6 DFAPS-FTQKPQLRQEDEGNRLIFECQLLCNPK--PDIVWFRG-ETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDA 81 (254)
Q Consensus 6 ~~~p~-~~~~~~~~~v~~g~~v~l~C~~~~~~~--~~v~W~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 81 (254)
..+|. +...+....+.+|+++.|.|.+.+ +. +.+.|+++ +..+....+.. ....+ .|.|.+++..|+
T Consensus 86 ~~~~~~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~~~~~~~~~~--~~~~~------~L~i~~~~~~d~ 156 (292)
T 4dkd_C 86 KDPARPWNVLAQEVVVFEDQDALLPCLLTD-PVLEAGVSLVRVRGRPLMRHTNYS--FSPWH------GFTIHRAKFIQS 156 (292)
T ss_dssp CCSSCCEEESCSEEEEETTSCEECCEEESS-GGGGSSEEEEEGGGCCCCSSCCEE--CCSSS------CCEETTCCGGGC
T ss_pred cCccccccccCCeEEEcCCCcEEEeeeCCC-CCcceeEEEEecCCCccccCCccc--ccCCc------eEEECCCCHHHC
Confidence 33443 466677788999999999999986 44 78999997 44443333221 11111 499999999999
Q ss_pred eEEEEEEEcCCCceE-EEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCC-CeEEEEECCEecccCCcc
Q psy7036 82 GLYKVKAKNKMGEVA-ASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPA-PTVIWSHSGVQVKEDKRH 159 (254)
Q Consensus 82 G~Y~C~~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~-~~~~W~~~~~~~~~~~~~ 159 (254)
|.|+|.+.|..+... ..+.|.|... ...+|.+...+....+..|+.+.|.|.+.+.|. ..+.|++++..+......
T Consensus 157 G~Y~C~a~n~~~~~~s~~~~l~V~~~--~~~~p~i~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~~w~~~~~~~~~~~~~ 234 (292)
T 4dkd_C 157 QDYQCSALMGGRKVMSISIRLKVQKV--IPGPPALTLVPAELVRIRGEAAQIVCSASSVDVNFDVFLQHNNTKLAIPQQS 234 (292)
T ss_dssp SEEEEEECSTTSCEECCCEEEEEECC--CCSSCEEEEESSCBCCCSSSCEEEEEEEEESSSCCEEECCBSSCCCCCCBEE
T ss_pred eEEEEEEEeCCCceeEEEEEEEEeCC--CCCCCeEEccCCceeEecCCCEEEEEEecCCCCceEEEEeCCCcccccCccc
Confidence 999999998776543 3677777631 112555555555556678999999999988765 568899988766543332
Q ss_pred eEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEec
Q psy7036 160 KFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDS 208 (254)
Q Consensus 160 ~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~ 208 (254)
.+. .......+.|.|.+++.+|.|.|+|.|.|..|....++.|.|..
T Consensus 235 ~~~--~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 281 (292)
T 4dkd_C 235 DFH--NNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTSMFFRVVE 281 (292)
T ss_dssp EEE--TTEEEEEEEEEESSCCTTSCEEEEEEEECSSCEEEEEEEECC--
T ss_pred eec--cceeeeEEEEEECccChhcCeEEEEEEecCCCCceeEEEEEEee
Confidence 221 11122235899999999999999999999999988888888764
No 161
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.91 E-value=6.3e-24 Score=159.55 Aligned_cols=178 Identities=17% Similarity=0.186 Sum_probs=128.3
Q ss_pred EeCCCceeecCCCeEEEEEEE-eeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEEEEEc
Q psy7036 12 TQKPQLRQEDEGNRLIFECQL-LCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKVKAKN 90 (254)
Q Consensus 12 ~~~~~~~~v~~g~~v~l~C~~-~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 90 (254)
...+.......|+.+.|.|.+ .+.|.+.++|++++..+..... ....+.....+.|.|.++...|.|.|+|.+.|
T Consensus 118 ~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~~~----~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n 193 (308)
T 4fom_A 118 IKGPDSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEMESTTT----SFPNETATIISQYKLFPTRFARGRRITCVVKH 193 (308)
T ss_dssp EECSSCCCTTCSCEEEEEEEEEEEBSCCEEEECCCSSBCCEEEE----ECTTSCEEEEEEEEECCCGGGTTCEEEEEEEC
T ss_pred ccccceeEEcCCceEEEEEEecCCcCCceEEEEECCcccccccc----eeeeecccccccceEEeeeecCCccEEEEEEc
Confidence 345555566788999999986 5789999999999877643211 11222233344799999999999999999999
Q ss_pred CCCceEE--EEEEEEeccccCCCCCccc-cCCCeeeecCCCeEEEEEEEeeCCCC-eEEEEECCEecccCCcceEEEcCC
Q psy7036 91 KMGEVAA--SINLNFSREQIDGLAPTFL-KKPSIRQEDDGKRLLFECRIQADPAP-TVIWSHSGVQVKEDKRHKFSIDKD 166 (254)
Q Consensus 91 ~~~~~~~--~~~l~v~~~~~~~~~~~~~-~~~~~~~~~~g~~~~l~C~~~~~~~~-~~~W~~~~~~~~~~~~~~~~~~~~ 166 (254)
..+.... .+.|.|. .+|.+. .......+..|+.+.|.|.+.+.|.| .+.|+|++..+..... ..+
T Consensus 194 ~~~~~~~~~~~~l~V~------~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~k~~~~~~~~~~-----~~~ 262 (308)
T 4fom_A 194 PALEKDIRYSFILDIQ------YAPEVSVTGYDGNWFVGRKGVNLKCNADANPPPFKSVWSRLDGQWPDGLL-----ASD 262 (308)
T ss_dssp TTCSSCEEEEEECCCC------EEEEECCBCCCSCEETTCCSCEEECCEEEESCEEEEECCBSSSCCCSSCB-----CST
T ss_pred cCCCCceEEeEEEEEe------cCCeeEEcccceeeeeccccEEEEEEEecCCCCcEEEEEECCeECCCcEE-----EcC
Confidence 8765433 4444443 233332 22233456678999999999999988 6999999877643321 112
Q ss_pred CCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEec
Q psy7036 167 GHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDS 208 (254)
Q Consensus 167 ~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~ 208 (254)
+ ..|.|.+++.+|+|.|+|.|.|..|....++.|.|..
T Consensus 263 ~----~~l~i~~v~~~d~G~Y~C~A~N~~G~~~~~~~l~V~~ 300 (308)
T 4fom_A 263 N----TLHFVHPLTFNYSGVYICKVTNSLGQRSDQKVIYISD 300 (308)
T ss_dssp T----EEECCSCCCSCCCSEEEEEEEETTEEEEEEEECCEEC
T ss_pred C----eEEEECCCChhhCEEEEEEEEeCCCcEEEEEEEEEEc
Confidence 2 2567889999999999999999999988888888764
No 162
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.90 E-value=9.9e-24 Score=148.88 Aligned_cols=162 Identities=15% Similarity=0.325 Sum_probs=107.7
Q ss_pred ecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEEEEEcCCCceEEEE
Q psy7036 20 EDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKVKAKNKMGEVAASI 99 (254)
Q Consensus 20 v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~ 99 (254)
+.+|++++|.|.+ |.+.++|+|+|..+..... .. ..|.|.+++.+|+|.|+|.+.+.. .. .+
T Consensus 15 ~~~G~~v~L~C~~---p~~~i~W~k~g~~l~~~~~------~~------~~L~i~~v~~~DsG~Y~C~~~~~~-s~--~~ 76 (204)
T 1sy6_A 15 YQEDGSVLLTCDA---EAKNITWFKDGKMIGFLTE------DK------KKWNLGSNAKDPRGMYQCKGSQNK-SK--PL 76 (204)
T ss_dssp CCSSSEEEEEECS---CSSEEEEEETTEEEEEEES------SC------CCEEEEEGGGCCEEEEEEESSSSC-CC--CE
T ss_pred ecCCCeEEEEEcC---CCCEEEEEECCEECCCCCC------CC------CeEEeCCCCcCCCEEEEEEecCCC-Ce--eE
Confidence 4689999999998 7789999999998764210 01 169999999999999999965432 21 23
Q ss_pred EEEEeccc------------------------c-CCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecc
Q psy7036 100 NLNFSREQ------------------------I-DGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVK 154 (254)
Q Consensus 100 ~l~v~~~~------------------------~-~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~ 154 (254)
.|.+.... . ...++.+...+. ....+|+.++|.|. +.|.+.+.|++++..+.
T Consensus 77 ~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~v~~~G~~v~L~C~--g~p~p~i~W~k~~~~l~ 153 (204)
T 1sy6_A 77 QVYYRMGSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTPY-KVSISGTTVILTCP--QYPGSEILWQHNDKNIG 153 (204)
T ss_dssp EEEEEC------------------------------------CCCC-EEEEETTEEEEECS--CCCSSCEEEEETTEEES
T ss_pred EEEEEEeccccccccccccccccccccccccccccccccceecCCc-eeeecCCcEEEEcC--CCCCCceEEEECCEECC
Confidence 44443000 0 000111222222 22237999999998 78888999999998875
Q ss_pred cCCcceEEEcCCCCceeeEEEEccC-CCCCceeEEEEEEcCCCcc-eEEEEEEEe
Q psy7036 155 EDKRHKFSIDKDGHSYFASLEIIDV-TIEDAGKYKVTAKNELGES-NATISLNFD 207 (254)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~l~i~~~-~~~d~G~y~C~~~~~~~~~-~~~~~~~v~ 207 (254)
...........++ .|.|.++ +.+|+|.|+|.|.|..|.. +..+.|.++
T Consensus 154 ~~~~~~~~~~~~~-----~L~I~~v~~~~D~G~Y~C~A~N~~g~~~s~~l~l~~~ 203 (204)
T 1sy6_A 154 GDEDDKNIGSDED-----HLSLKEFSELEQSGYYVCYPRGSKPEDANFYLYLRAR 203 (204)
T ss_dssp CCTTCTTEEEETT-----EEEETTCCHHHHCEEEEEEETTSCGGGSSCEEEEEEC
T ss_pred CccCCceEecCCC-----EEEEeeCCccccCEEEEEEeccCCCCceeEEEEEEEe
Confidence 4322111111233 7999999 9999999999999999863 566666543
No 163
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.90 E-value=2.6e-22 Score=146.74 Aligned_cols=184 Identities=15% Similarity=0.202 Sum_probs=120.5
Q ss_pred eCCCceeecCCCeEEEEEEEeeCC--CCceEEEeC--CEEe---ee--------------CCcceEEEeecCCcceEEEE
Q psy7036 13 QKPQLRQEDEGNRLIFECQLLCNP--KPDIVWFRG--ETQL---SE--------------DTRTVMKTTPIGTNKYLVAL 71 (254)
Q Consensus 13 ~~~~~~~v~~g~~v~l~C~~~~~~--~~~v~W~~~--~~~~---~~--------------~~~~~~~~~~~~~~~~~~~l 71 (254)
..|....+.+|++|+|.|.+.+.+ .+.+.|+|+ +..+ .. ..++.+... ......+|
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~---~~~~~~~L 81 (256)
T 1nqb_A 5 QQSGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVD---KPSSTAYM 81 (256)
T ss_dssp EECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEE---TTTTEEEE
T ss_pred ECCCCeeecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEe---cCCCEEEE
Confidence 456677899999999999998765 678999984 2211 10 122222221 11224489
Q ss_pred EEeccCCCCCeEEEEEEEcCCCc-----eEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCC----
Q psy7036 72 ELDDVIETDAGLYKVKAKNKMGE-----VAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAP---- 142 (254)
Q Consensus 72 ~i~~~~~~d~G~Y~C~~~~~~~~-----~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~---- 142 (254)
.|.+++.+|+|.|+|.+.+..+. ......|.|. .++.+...+....+.+|+.++|.|.+.+.+.+
T Consensus 82 ~I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~------~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~ 155 (256)
T 1nqb_A 82 QLSSLTSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVS------SDIELTQTPLSLPVSLGDQASISCRSSQSIVHSNGN 155 (256)
T ss_dssp EECSCCGGGCEEEEEEECCTTSSSSCSEECCCEEEEEC------CCCCEEEECSEEEECTTCCEEEEEEESSCCBCTTSC
T ss_pred EECcCChhhCEEEEEEEeeccCccceeEEcCceeeeec------ccccEEecCcEEEEecCCcEEEEeEecCcccccccc
Confidence 99999999999999999987552 1234566665 33444444556678899999999999888765
Q ss_pred -eEEEEE--CCEeccc----------CCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCc-ceEEEEEEEe
Q psy7036 143 -TVIWSH--SGVQVKE----------DKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGE-SNATISLNFD 207 (254)
Q Consensus 143 -~~~W~~--~~~~~~~----------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~-~~~~~~~~v~ 207 (254)
.+.|+| ++..+.. ....++...... ....|.|.+++.+|+|.|+|.+.+.... ......|.|.
T Consensus 156 ~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~ 232 (256)
T 1nqb_A 156 TYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSG--TDFTLKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEIK 232 (256)
T ss_dssp BCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEET--TEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred eEEEEEEECCCCCcEEEEEEeCCCCCccCCcEEEEccC--CEEEEEECCCChHHCEEEEEEEccCCceEECCCEEEEEE
Confidence 899999 4543210 001112111111 1237999999999999999999885432 2233445554
No 164
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.90 E-value=3.2e-23 Score=151.27 Aligned_cols=189 Identities=18% Similarity=0.193 Sum_probs=123.6
Q ss_pred CCeeEeCCCceeecCCCeEEEEEEEeeCC-----CCceEEEeCC--E---Eeee---------CCcceEEEeecCCcceE
Q psy7036 8 APSFTQKPQLRQEDEGNRLIFECQLLCNP-----KPDIVWFRGE--T---QLSE---------DTRTVMKTTPIGTNKYL 68 (254)
Q Consensus 8 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~-----~~~v~W~~~~--~---~~~~---------~~~~~~~~~~~~~~~~~ 68 (254)
.+.+.+.|....+.+|++|+|.|.+.+.+ .+.+.|||++ . .+.. ..++... . ....
T Consensus 34 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~--~---~~~~ 108 (252)
T 3bkj_L 34 DVLMTQTPLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGS--G---SGTD 108 (252)
T ss_dssp CCCEEEECSEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEE--E---ETTE
T ss_pred ccEEEeCCceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEE--c---cCCE
Confidence 45567778888999999999999998876 5889999854 1 1110 1122221 1 1223
Q ss_pred EEEEEeccCCCCCeEEEEEEEcCCCce-EEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeC-CCC-eEE
Q psy7036 69 VALELDDVIETDAGLYKVKAKNKMGEV-AASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQAD-PAP-TVI 145 (254)
Q Consensus 69 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~-~~~ 145 (254)
..|.|.+++.+|+|.|.|.+.+..+.. .....|.|... ..+|.+...........|+.++|.|.+.+. |.+ .+.
T Consensus 109 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~---~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~ 185 (252)
T 3bkj_L 109 FTLRISRVEAEDLGVYYCFQASLVPLTFGAGTKLELKRA---DAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVK 185 (252)
T ss_dssp EEEEESSCCGGGCEEEEEEECSBSSCEECCCEEEEECCC---CBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEE
T ss_pred EEEEECCCCcccCEEEEEEEEcCCccEECCCEEEEEeCC---CcCcEEEEeCCChhhcCCCcEEEEEEEeeEeCCCcEEE
Confidence 479999999999999999998875532 22345666421 123443332222223368899999999884 443 799
Q ss_pred EEECCEecccC-Cc-ceEEEcCCCC-ceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEE
Q psy7036 146 WSHSGVQVKED-KR-HKFSIDKDGH-SYFASLEIIDVTIEDAGKYKVTAKNELGESNATISL 204 (254)
Q Consensus 146 W~~~~~~~~~~-~~-~~~~~~~~~~-~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~ 204 (254)
|++++..+... .. .......++. ...+.|.|.+...+|.|.|+|.|.|..........+
T Consensus 186 W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~p~~~~~ 247 (252)
T 3bkj_L 186 WKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSF 247 (252)
T ss_dssp EEETTEEECSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSSCEEEEE
T ss_pred EEECCeecCCCeeeecCcccCCCCCEEEEEEEEEcchhccCCCeEEEEEEeCCCCCCeeEee
Confidence 99999887543 11 1111122222 334679999999999999999999987665444333
No 165
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.90 E-value=7.1e-23 Score=148.36 Aligned_cols=179 Identities=17% Similarity=0.206 Sum_probs=117.7
Q ss_pred eeEeCCCceeecCCCeEEEEEEEeeCC----CCceEEEeCC--E---Eeee---------CCcceEEEeecCCcceEEEE
Q psy7036 10 SFTQKPQLRQEDEGNRLIFECQLLCNP----KPDIVWFRGE--T---QLSE---------DTRTVMKTTPIGTNKYLVAL 71 (254)
Q Consensus 10 ~~~~~~~~~~v~~g~~v~l~C~~~~~~----~~~v~W~~~~--~---~~~~---------~~~~~~~~~~~~~~~~~~~l 71 (254)
.+.+.|....+.+|++|+|.|.+.+.+ .+.+.|+|++ . .+.. ..++.+. . .....+|
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~--~---~~~~~~L 77 (240)
T 1moe_A 3 VLTQSPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGT--G---SRTDFTL 77 (240)
T ss_dssp CEEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEE--E---ETTEEEE
T ss_pred ceEeeCCeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEE--e---cCCeEEE
Confidence 467778888999999999999998877 7889999852 1 1111 1222221 1 1123479
Q ss_pred EEeccCCCCCeEEEEEEEcCCCc-eEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCC--CeEEEEE
Q psy7036 72 ELDDVIETDAGLYKVKAKNKMGE-VAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPA--PTVIWSH 148 (254)
Q Consensus 72 ~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~--~~~~W~~ 148 (254)
.|.+++..|+|.|+|.+.+..+. ......|.|........++.....+....+.+|+.+.|.|.+.+.|. +.+.|+|
T Consensus 78 ~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k 157 (240)
T 1moe_A 78 IIDPVEADDVATYYCQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVK 157 (240)
T ss_dssp EESSCCGGGCEEEEEEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEE
T ss_pred EEcCCChhhCEEEEEEEccCCceeecCCEEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEEEcCccCCCCEEEEEE
Confidence 99999999999999999987654 33455677753211111222333345567889999999999998873 5899999
Q ss_pred C--CEecc-----c--C--------CcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEc
Q psy7036 149 S--GVQVK-----E--D--------KRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKN 193 (254)
Q Consensus 149 ~--~~~~~-----~--~--------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~ 193 (254)
+ +..+. . . ...++....+.......|.|.+++.+|+|.|+|.|.+
T Consensus 158 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 219 (240)
T 1moe_A 158 QRPEQGLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSEDTAVYYCAPFG 219 (240)
T ss_dssp ECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECS
T ss_pred ECCCCCcEEEEEEcccCCccccCccccccEEEEEcccCCEEEEEECcCCHHHCEEEEEEEEe
Confidence 6 22210 0 0 0111222111111124799999999999999999985
No 166
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.90 E-value=8.6e-23 Score=149.76 Aligned_cols=157 Identities=16% Similarity=0.200 Sum_probs=119.8
Q ss_pred eCCCceeecCCCeEEEEEEE-eeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEEEEEcC
Q psy7036 13 QKPQLRQEDEGNRLIFECQL-LCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKVKAKNK 91 (254)
Q Consensus 13 ~~~~~~~v~~g~~v~l~C~~-~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~ 91 (254)
..+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+..... . ..|.|.+++..|+|.|+|.+.|.
T Consensus 87 ~~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~~~~-------~------~~l~i~~~~~~d~G~Y~C~~~n~ 153 (262)
T 3rjd_A 87 LQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFFHW-------N------SNLTILKTNISHNGTYHCSGMGK 153 (262)
T ss_dssp EEESCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEEEEE-------C------CCEEESSCCGGGCEEEEEEEESS
T ss_pred ecCCCeEEecCCeEEEEEEccCCCCCceEEEEECCccccccCC-------C------CeEEEEECChhhCEEEEEEEeCC
Confidence 34455678899999999999 6678889999999998753211 1 16999999999999999999998
Q ss_pred CCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCC-Ce----EEEEECCEecccCCcceEEEcCC
Q psy7036 92 MGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPA-PT----VIWSHSGVQVKEDKRHKFSIDKD 166 (254)
Q Consensus 92 ~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~-~~----~~W~~~~~~~~~~~~~~~~~~~~ 166 (254)
.+.....+.|.|.... .+|.+...+ ...+..|+.+.|.|.+.+.|. +. +.|++++..+... ...
T Consensus 154 ~~~~~~~~~l~V~~~~---~~p~~~~~~-~~~~~~g~~~~l~C~~~~~p~~p~~~~~~~w~~~~~~~~~~-------~~~ 222 (262)
T 3rjd_A 154 HRYTSAGISVTVKELF---PAPVLNASV-TSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRGR-------NTS 222 (262)
T ss_dssp SEEEEECEEEEEECSS---CCCEEEESS-CSSEETTCCEEEEEECCCCCC-----EEEEEEETTEEEEEE-------ESC
T ss_pred CCccccceEEEeccCC---CCCeEeecC-ceeecCCCeEEEEeEcccCCCCCCccEEEEEEeCCcEeccc-------CCC
Confidence 8777777788876311 233333333 445778999999999998875 43 7899998876422 111
Q ss_pred CCceeeEEEEccCCCCCceeEEEEEEcCCCcc
Q psy7036 167 GHSYFASLEIIDVTIEDAGKYKVTAKNELGES 198 (254)
Q Consensus 167 ~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~ 198 (254)
+.|.|.++..+|.|.|+|.|.|..|..
T Consensus 223 -----~~L~i~~v~~~d~G~Y~C~a~n~~G~~ 249 (262)
T 3rjd_A 223 -----SEYQILTARREDSGLYWCEAATEDGNV 249 (262)
T ss_dssp -----CEEEESSCCGGGCEEEEEEEEETTSSC
T ss_pred -----ceEEEEEechhhCeEEEEEEEcccCce
Confidence 279999999999999999999999975
No 167
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.90 E-value=6.4e-23 Score=144.60 Aligned_cols=175 Identities=12% Similarity=0.150 Sum_probs=116.2
Q ss_pred ceeecCCCeEEEEEEEee----CCCCceEEEeCCEEeeeCC----------cceEEEeecCCcceEEEEEEeccCCCCCe
Q psy7036 17 LRQEDEGNRLIFECQLLC----NPKPDIVWFRGETQLSEDT----------RTVMKTTPIGTNKYLVALELDDVIETDAG 82 (254)
Q Consensus 17 ~~~v~~g~~v~l~C~~~~----~~~~~v~W~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G 82 (254)
.+.+.+|++++|.|.+.+ .+.+.+.|++++..+.... ..+...... . ..+|.|.+++..|+|
T Consensus 3 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~~~-~---~~~L~I~~v~~~D~G 78 (201)
T 1dr9_A 3 HVTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDIT-N---NLSIVILALRPSDEG 78 (201)
T ss_dssp EEEEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEEST-T---TTEEEECSCCGGGCE
T ss_pred eEEEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEccC-C---CcEEEEecccchhCe
Confidence 457889999999999853 3567899999998763110 111111111 1 127999999999999
Q ss_pred EEEEEEEcCCCce-----EEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEe-eCCCCeEEEEECCEecccC
Q psy7036 83 LYKVKAKNKMGEV-----AASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQ-ADPAPTVIWSHSGVQVKED 156 (254)
Q Consensus 83 ~Y~C~~~~~~~~~-----~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~~~~~~~~W~~~~~~~~~~ 156 (254)
.|+|.+.+..+.. ...+.|.|.... ..|.+. ......|+.+.|.|.+. +.|.|.+.|++++..+...
T Consensus 79 ~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~---~~p~~~----~~~~~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~~ 151 (201)
T 1dr9_A 79 TYECVVLKYEKDAFKREHLAEVTLSVKADF---PTPSIS----DFEIPTSNIRRIICSTSGGFPEPHLSWLENGEELNAI 151 (201)
T ss_dssp EEEEEEEECCTTSCEEEEEEEEEEEEECCC---CCCEEE----EEECSSTTEEEEEEEEEEESSCEEEEEEESSCEECCS
T ss_pred EEEEEEEcCCCCccccccccEEEEEEcCCC---CCCceE----eccCCCCCeEEEEEecCCccCCCEEEEEECCEECccc
Confidence 9999999976543 346667765311 112211 11224588999999995 8999999999999887644
Q ss_pred CcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEE
Q psy7036 157 KRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISL 204 (254)
Q Consensus 157 ~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~ 204 (254)
. .......++..+. ...+..+..+|.|.|+|.|.|..+.....+.+
T Consensus 152 ~-~~~~~~~~~~~~~-~~~~~~v~~~d~g~Y~C~a~n~~~~~s~~~~~ 197 (201)
T 1dr9_A 152 N-TTVSQDPETELYA-VSSKLDFNMTTNHSFMCLIKYGHLRVNQTFNW 197 (201)
T ss_dssp E-EEEEECTTTCCEE-EEEEEEEETTSCEEEEEEEEETTCCEEEEEEE
T ss_pred c-ceEEecCCCcEEE-EEEEEEEEecCCCEEEEEEecCcceeeeEEec
Confidence 2 2333333322221 12233445689999999999999887776654
No 168
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.90 E-value=2.3e-22 Score=148.63 Aligned_cols=182 Identities=14% Similarity=0.186 Sum_probs=118.3
Q ss_pred CCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCC-----EEeee---------CCcceEEEeecCCcceEEEEEE
Q psy7036 8 APSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGE-----TQLSE---------DTRTVMKTTPIGTNKYLVALEL 73 (254)
Q Consensus 8 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~-----~~~~~---------~~~~~~~~~~~~~~~~~~~l~i 73 (254)
.+.+.+.|....+.+|++|+|.|.+.+.+.+.+.|||++ ..+.. ..++.+. . ......|.|
T Consensus 12 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~--~---~~~~~~L~I 86 (276)
T 3auv_A 12 DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGS--G---SGTDFTLTI 86 (276)
T ss_dssp CCCEEEECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEE--E---ETTEEEEEE
T ss_pred ceeEEeCCCeEEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEe--c---cCCeEEEEE
Confidence 456778888889999999999999988888899999854 12211 1222221 1 122347999
Q ss_pred eccCCCCCeEEEEEEEcCCCc-eEEEEEEEEeccccC--------CCCCccccCCCeeeecCCCeEEEEEEEeeCC--CC
Q psy7036 74 DDVIETDAGLYKVKAKNKMGE-VAASINLNFSREQID--------GLAPTFLKKPSIRQEDDGKRLLFECRIQADP--AP 142 (254)
Q Consensus 74 ~~~~~~d~G~Y~C~~~~~~~~-~~~~~~l~v~~~~~~--------~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~--~~ 142 (254)
.+++.+|+|.|.|.+.|..+. ......|.|...+.. ..++.....+....+.+|+.++|.|.+.+.+ .+
T Consensus 87 ~~v~~~DsG~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~ 166 (276)
T 3auv_A 87 SSLQPEDFATYYCQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLSCAASGFTISDY 166 (276)
T ss_dssp SSCCGGGCEEEEEEECSSSSCCCCCCEEEEC-----------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGS
T ss_pred ccCChhhCEEEEEEEecCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEecCCCeEEEEEEecCccCCCC
Confidence 999999999999999987543 223355666532100 0111222233456788999999999998876 48
Q ss_pred eEEEEECC--Eec---c------------cCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcC
Q psy7036 143 TVIWSHSG--VQV---K------------EDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNE 194 (254)
Q Consensus 143 ~~~W~~~~--~~~---~------------~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~ 194 (254)
.+.|+|++ ... . .....++....+.......|.|.+++.+|+|.|+|.+.|.
T Consensus 167 ~v~W~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 235 (276)
T 3auv_A 167 WIHWVRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVF 235 (276)
T ss_dssp EEEEEEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred EEEEEEcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhHCEEEEEEEEcC
Confidence 89999963 111 0 0011122222111111237999999999999999999997
No 169
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.90 E-value=4.3e-23 Score=150.06 Aligned_cols=187 Identities=12% Similarity=0.200 Sum_probs=122.6
Q ss_pred CeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEe----------------CCEEeeeC---CcceEEEeecCCcceEE
Q psy7036 9 PSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFR----------------GETQLSED---TRTVMKTTPIGTNKYLV 69 (254)
Q Consensus 9 p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~----------------~~~~~~~~---~~~~~~~~~~~~~~~~~ 69 (254)
+.+++.|..+.+.+|++|+|.|.+.+.+.+.+.||| ++...... .++.+... . ...+
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~--~--~~~~ 77 (246)
T 4dzb_B 2 AVVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHA--S--LTLS 77 (246)
T ss_dssp CCEEEECSEEEEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEE--E--TTEE
T ss_pred CccEECCcEEEEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEec--C--CCEE
Confidence 356778888899999999999999988889999998 22222111 22222211 1 2245
Q ss_pred EEEEeccCCCCCeEEEEEEEcCCC----ceEEEEEEEEeccccCCCCCccc-cCCCeeeecCCCeEEEEEEEeeCCCC--
Q psy7036 70 ALELDDVIETDAGLYKVKAKNKMG----EVAASINLNFSREQIDGLAPTFL-KKPSIRQEDDGKRLLFECRIQADPAP-- 142 (254)
Q Consensus 70 ~l~i~~~~~~d~G~Y~C~~~~~~~----~~~~~~~l~v~~~~~~~~~~~~~-~~~~~~~~~~g~~~~l~C~~~~~~~~-- 142 (254)
+|.|.+++.+|+|.|.|.+.+..+ .......|.|........+|.+. ..+....+..|+.+.|.|.+.+.+++
T Consensus 78 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~ 157 (246)
T 4dzb_B 78 TLTVTSAHPEDSSFYICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHV 157 (246)
T ss_dssp EEEECSCCGGGCEEEEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCE
T ss_pred EEEECCCCHHHCEEEEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeecCCchhccCCCcEEEEEEEccCcCCce
Confidence 899999999999999999987543 12234456665321111233332 22333344568999999999886654
Q ss_pred eEEEEECCEecccCCcceEEE-------cCCCCceeeEEEEccCCCCC-ceeEEEEEEcCCCcce
Q psy7036 143 TVIWSHSGVQVKEDKRHKFSI-------DKDGHSYFASLEIIDVTIED-AGKYKVTAKNELGESN 199 (254)
Q Consensus 143 ~~~W~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~i~~~~~~d-~G~y~C~~~~~~~~~~ 199 (254)
.+.|++++..+.......... ....+...+.|.|.....+| .|.|+|.|.|......
T Consensus 158 ~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~~~~~ 222 (246)
T 4dzb_B 158 ELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 222 (246)
T ss_dssp EEEEEETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCTT
T ss_pred EEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEecCCCCc
Confidence 899999998876432211100 01122233568888888888 9999999999866544
No 170
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.90 E-value=7.4e-23 Score=146.34 Aligned_cols=183 Identities=13% Similarity=0.182 Sum_probs=117.3
Q ss_pred CCCceeecCCCeEEEEEEEeeCC--CCceEEEeCC--EE---e-ee---------------CCcceEEEeecCCcceEEE
Q psy7036 14 KPQLRQEDEGNRLIFECQLLCNP--KPDIVWFRGE--TQ---L-SE---------------DTRTVMKTTPIGTNKYLVA 70 (254)
Q Consensus 14 ~~~~~~v~~g~~v~l~C~~~~~~--~~~v~W~~~~--~~---~-~~---------------~~~~~~~~~~~~~~~~~~~ 70 (254)
.|....+.+|++++|.|.+.+.+ .+.+.|+|++ .. + .. ..++.+.... .....+
T Consensus 6 ~p~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~---~~~~~~ 82 (220)
T 1pz5_B 6 ESGGGLVQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDD---SKSSVY 82 (220)
T ss_dssp EECCEEECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEG---GGTEEE
T ss_pred ccCCEEEcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeC---CCCeEE
Confidence 45677899999999999998765 6789999853 11 1 10 1222222111 122448
Q ss_pred EEEeccCCCCCeEEEEEEEcCCCce-E--EEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeC-CCC-eEE
Q psy7036 71 LELDDVIETDAGLYKVKAKNKMGEV-A--ASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQAD-PAP-TVI 145 (254)
Q Consensus 71 l~i~~~~~~d~G~Y~C~~~~~~~~~-~--~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~-~~~ 145 (254)
|.|.+++.+|+|.|.|.+.+..+.. . ....|.|... ...+|.+........+.+|+.+.|.|.+.+. |.| .+.
T Consensus 83 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~--~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~ 160 (220)
T 1pz5_B 83 LQMNNLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSA--TTTAPSVYPLVPGCSDTSGSSVTLGCLVKGYFPEPVTVK 160 (220)
T ss_dssp EEECSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSS--CCBCCEEEEECCCSCCSCSSSEEEEEEEEEEBSSCCEEE
T ss_pred EEEccCCHHHCEEEEEEEecCCcccceECCCEEEEEccC--CCCCCeEEEcccccccCCCCcEEEEEEEEEEeCCCeEEE
Confidence 9999999999999999999875321 1 3456666421 1123333322222235679999999999987 888 999
Q ss_pred EEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEE
Q psy7036 146 WSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATIS 203 (254)
Q Consensus 146 W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~ 203 (254)
|++++............ ..+.+...+.|.|.+...+| |.|+|.|.|..+...+++.
T Consensus 161 W~~~~~~~~~~~~~~~~-~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~ 216 (220)
T 1pz5_B 161 WNYGALSSGVRTVSSVL-QSGFYSLSSLVTVPSSTWPS-QTVICNVAHPASKVDLIKE 216 (220)
T ss_dssp EGGGTCCTTEEECCCEE-ETTEEEEEEEEEECGGGTTT-SCCEEEEEEGGGTEEEEEE
T ss_pred EecCCcccceEEcCCcc-cCCeEEEEEEEEEcchhcCC-ceEEEEEEECCccEeeeec
Confidence 99987642100000011 11112234579999888766 9999999999987666543
No 171
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.90 E-value=2.5e-22 Score=146.88 Aligned_cols=185 Identities=15% Similarity=0.195 Sum_probs=120.6
Q ss_pred CCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCC--E---Eee----------eCCcceEEEeecCCcceEEEEE
Q psy7036 8 APSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGE--T---QLS----------EDTRTVMKTTPIGTNKYLVALE 72 (254)
Q Consensus 8 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~--~---~~~----------~~~~~~~~~~~~~~~~~~~~l~ 72 (254)
...+++.|....+.+|++|+|.|.+.+.+.+.+.|||.. . .+. ...++..... ......+|.
T Consensus 3 ~~~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~---~~~~~~sL~ 79 (256)
T 3tf7_C 3 AQSVTQPDARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFS---KSDSSFHLR 79 (256)
T ss_dssp -CEEECSCSEEEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEE---TTTTEEEEE
T ss_pred ccEEEecCceEEecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEc---CCCCEEEEE
Confidence 346778888899999999999999988899999999832 1 111 1223322211 112344899
Q ss_pred EeccCCCCCeEEEEEEEcCCCc----eEEEEEEEEeccc--------------cCCCCCccccCCCeeeecCCCeEEEEE
Q psy7036 73 LDDVIETDAGLYKVKAKNKMGE----VAASINLNFSREQ--------------IDGLAPTFLKKPSIRQEDDGKRLLFEC 134 (254)
Q Consensus 73 i~~~~~~d~G~Y~C~~~~~~~~----~~~~~~l~v~~~~--------------~~~~~~~~~~~~~~~~~~~g~~~~l~C 134 (254)
|.+++.+|+|.|+|.+.+..+. ......|.|.... ....++.+...+....+.+|+.++|.|
T Consensus 80 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C 159 (256)
T 3tf7_C 80 KASVHRSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSPRNKVTVTGENVTLSC 159 (256)
T ss_dssp ESSCCGGGCSEEEEEEECTTCTTCEEECCCEEEEEEC---------------------CCEEESCSEEEEETTCCEEECE
T ss_pred ECCCCcccCEEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecCCEEEEeCCCcEEEEE
Confidence 9999999999999999986542 2224566665310 011344555666677788999999999
Q ss_pred EEeeCCCCeEEEEECCE--ec---cc---C-------CcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCc
Q psy7036 135 RIQADPAPTVIWSHSGV--QV---KE---D-------KRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGE 197 (254)
Q Consensus 135 ~~~~~~~~~~~W~~~~~--~~---~~---~-------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~ 197 (254)
.+.+. .+.+.|+|... .. .. . ...++..... ......|.|.+++.+|+|.|+|.+.|..|.
T Consensus 160 ~~~~~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~ 235 (256)
T 3tf7_C 160 RQTNS-HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRT-TQEDFFLTLESASPSQTSLYFCASSDAPGQ 235 (256)
T ss_dssp EECSC-CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECC-SSSBCEEEESSCCGGGCEEEEEEEEEETTE
T ss_pred EcCCC-ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeC-CCCeEEEEECCCCHHHCEEEEEEecCCCCc
Confidence 99876 67899998421 10 00 0 0011111111 111237999999999999999999997664
No 172
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.90 E-value=1.3e-22 Score=148.15 Aligned_cols=193 Identities=15% Similarity=0.170 Sum_probs=123.4
Q ss_pred eEeCCCceeecCCCeEEEEEEEeeCC--CCceEEEeC--CEEee-----------------eCCcceEEEeecCCcceEE
Q psy7036 11 FTQKPQLRQEDEGNRLIFECQLLCNP--KPDIVWFRG--ETQLS-----------------EDTRTVMKTTPIGTNKYLV 69 (254)
Q Consensus 11 ~~~~~~~~~v~~g~~v~l~C~~~~~~--~~~v~W~~~--~~~~~-----------------~~~~~~~~~~~~~~~~~~~ 69 (254)
++..|....+.+|++|+|.|.+.+.+ .+.+.|||. +..+. ...++.+... .....+
T Consensus 4 ~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~---~~~~~~ 80 (253)
T 3uzq_A 4 LLEQSGAELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITAD---TSSNTA 80 (253)
T ss_dssp CEEECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEE---TTTTEE
T ss_pred eEecCCCeeecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEee---cCCCeE
Confidence 45677788999999999999998744 678999982 21110 0122222221 112244
Q ss_pred EEEEeccCCCCCeEEEEEEEcCCCce-EEEEEEEEeccc---------cCCCCCccccCCCeeeecCCCeEEEEEEEeeC
Q psy7036 70 ALELDDVIETDAGLYKVKAKNKMGEV-AASINLNFSREQ---------IDGLAPTFLKKPSIRQEDDGKRLLFECRIQAD 139 (254)
Q Consensus 70 ~l~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~v~~~~---------~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~ 139 (254)
+|.|.+++.+|+|.|+|.+.+..+.. .....|.|.... ....++.+...+....+.+|+.++|.|.+.+.
T Consensus 81 ~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~ 160 (253)
T 3uzq_A 81 YLHLSSLTSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAVSLGQRATISCRASEN 160 (253)
T ss_dssp EEEECSCCGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEECTTSCEEEEEEESSC
T ss_pred EEEeCCCCcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEEeCCCCEEEEEEecCc
Confidence 79999999999999999999865543 245566665310 01123444555666788899999999999888
Q ss_pred CCC----eEEEEECC--Eecc---c-------CCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcc-eEEE
Q psy7036 140 PAP----TVIWSHSG--VQVK---E-------DKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGES-NATI 202 (254)
Q Consensus 140 ~~~----~~~W~~~~--~~~~---~-------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~-~~~~ 202 (254)
+.+ .+.|+|+. .... . ....++.....+ ....|.|.+++.+|+|.|.|.+.|..+.. ....
T Consensus 161 ~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~fg~gt 238 (253)
T 3uzq_A 161 VDRYGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSR--TDFTLTINPVEADDVATYFCQRSNEVPWTFGGGT 238 (253)
T ss_dssp CEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET--TEEEEEESSCCGGGCEEEEEEECSSSSCCBCCCE
T ss_pred cccCCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCC--CEEEEEECCCCHHHCEEEEEEEccCCCcEECCCE
Confidence 776 89999852 2111 0 000112111111 12379999999999999999999865432 3344
Q ss_pred EEEEec
Q psy7036 203 SLNFDS 208 (254)
Q Consensus 203 ~~~v~~ 208 (254)
.|.|..
T Consensus 239 ~l~v~~ 244 (253)
T 3uzq_A 239 KLEIKR 244 (253)
T ss_dssp EEEECC
T ss_pred EEEEcC
Confidence 566654
No 173
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.90 E-value=2.3e-22 Score=145.49 Aligned_cols=181 Identities=15% Similarity=0.198 Sum_probs=115.0
Q ss_pred eeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeC--CEEe---e----------e--CCcceEEEeecCCcceEEEEE
Q psy7036 10 SFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRG--ETQL---S----------E--DTRTVMKTTPIGTNKYLVALE 72 (254)
Q Consensus 10 ~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~--~~~~---~----------~--~~~~~~~~~~~~~~~~~~~l~ 72 (254)
.+.+.|..+.+.+|++|+|.|. .+.+.+.+.|+|+ +..+ . . ..++.+.. . ......|.
T Consensus 2 ~v~q~p~~~~v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~--~~~~~~L~ 76 (238)
T 2p1y_A 2 AVTQSPRNKVAVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASR--P--SQENFSLI 76 (238)
T ss_dssp CEEEECSEEEEETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEEC--C--SSSBCEEE
T ss_pred cceECccceEEeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEc--c--CCceEEEE
Confidence 4667788889999999999999 6788899999995 2111 0 0 12222221 1 11223799
Q ss_pred EeccCCCCCeEEEEEEEcCCCc-----eEEEEEEEEeccccCCC------CCccccCCCeeeecCCCeEEEEEEEeeCCC
Q psy7036 73 LDDVIETDAGLYKVKAKNKMGE-----VAASINLNFSREQIDGL------APTFLKKPSIRQEDDGKRLLFECRIQADPA 141 (254)
Q Consensus 73 i~~~~~~d~G~Y~C~~~~~~~~-----~~~~~~l~v~~~~~~~~------~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~ 141 (254)
|.+++.+|+|.|+|.+.+..+. ......|.|........ .+.+...+....+.+|+.++|.|.+.+.|.
T Consensus 77 I~~v~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~ 156 (238)
T 2p1y_A 77 LELATPSQTSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTVWEGETAILNCSYENSAF 156 (238)
T ss_dssp ESSCCGGGCEEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSEEEEETTSCEEEEEECCCTTC
T ss_pred EecCCcccCeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCceEEEeCCCeEEEEEEEecCCC
Confidence 9999999999999999987542 11234566643110000 013333455667889999999999999999
Q ss_pred CeEEEEECCE--e---cc---c----CCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCC
Q psy7036 142 PTVIWSHSGV--Q---VK---E----DKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNEL 195 (254)
Q Consensus 142 ~~~~W~~~~~--~---~~---~----~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~ 195 (254)
+.+.|+|++. . +. . ....++....+.......|.|.+++.+|+|.|+|.|.|..
T Consensus 157 ~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 157 DYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAIDTN 222 (238)
T ss_dssp CEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEEEEEEEETT
T ss_pred CcEEEEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEEEEEEeeCC
Confidence 9999999641 1 10 0 0011111110111112479999999999999999999974
No 174
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.90 E-value=1.8e-22 Score=147.20 Aligned_cols=181 Identities=15% Similarity=0.196 Sum_probs=116.7
Q ss_pred CCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCC-----EEeee---------CCcceEEEeecCCcceEEEEEE
Q psy7036 8 APSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGE-----TQLSE---------DTRTVMKTTPIGTNKYLVALEL 73 (254)
Q Consensus 8 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~-----~~~~~---------~~~~~~~~~~~~~~~~~~~l~i 73 (254)
.+.+.+.|..+.+.+|++|+|.|.+.+.+.+.+.|+|++ ..+.. ..++.. ... .....|.|
T Consensus 4 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~--~~~---~~~~~L~I 78 (250)
T 3esu_F 4 DIVLIQSTSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSG--SGS---GTDYSLTI 78 (250)
T ss_dssp CCCEECSCSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEE--EEE---TTEEEEEE
T ss_pred ceeEEecCCEEEeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEE--eCC---CCEEEEEE
Confidence 346777888889999999999999998888899999853 11110 112211 111 12347999
Q ss_pred eccCCCCCeEEEEEEEcCCCce-EEEEEEEEecccc-------------CCCCCccccCCCeeeecCCCeEEEEEEEeeC
Q psy7036 74 DDVIETDAGLYKVKAKNKMGEV-AASINLNFSREQI-------------DGLAPTFLKKPSIRQEDDGKRLLFECRIQAD 139 (254)
Q Consensus 74 ~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~v~~~~~-------------~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~ 139 (254)
.+++.+|+|.|.|.+.|..+.. .....|.|..... ...++.....+....+.+|+.++|.|.+.+.
T Consensus 79 ~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~ 158 (250)
T 3esu_F 79 SNLEQEDIGTYFCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPELVKPGASVKISCKDSGY 158 (250)
T ss_dssp SSCCGGGCEEEEEEECSSSSCEECCCEEEEEC------------------------CEECCCEEECTTCCEEEEEECCST
T ss_pred ccCChhhCEEEEEEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCceEEcCCceEEEEEEecCC
Confidence 9999999999999999875542 2334566643100 0012222333445668899999999999887
Q ss_pred C--CCeEEEEEC--CEeccc---------------CCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEc
Q psy7036 140 P--APTVIWSHS--GVQVKE---------------DKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKN 193 (254)
Q Consensus 140 ~--~~~~~W~~~--~~~~~~---------------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~ 193 (254)
+ .+.+.|+|+ +..+.. ....++....++.....+|.|.+++.+|+|.|.|.+.+
T Consensus 159 ~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 159 AFSSSWMNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAVYFCARSG 231 (250)
T ss_dssp TGGGSEEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred cccCCEEEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCcccCEEEEEEEec
Confidence 6 778999997 332210 00012222211111224799999999999999999997
No 175
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.90 E-value=1.7e-22 Score=147.81 Aligned_cols=177 Identities=18% Similarity=0.212 Sum_probs=113.7
Q ss_pred CCCceeecCCCeEEEEEEEeeCC--CCceEEEeC--CE---Eee-------------eCCcceEEEeecCCcceEEEEEE
Q psy7036 14 KPQLRQEDEGNRLIFECQLLCNP--KPDIVWFRG--ET---QLS-------------EDTRTVMKTTPIGTNKYLVALEL 73 (254)
Q Consensus 14 ~~~~~~v~~g~~v~l~C~~~~~~--~~~v~W~~~--~~---~~~-------------~~~~~~~~~~~~~~~~~~~~l~i 73 (254)
.|....+.+|++|+|.|.+.+.+ .+.+.|+|+ +. .+. ...++.+... ......+|.|
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~---~~~~~~~L~I 82 (257)
T 1f3r_B 6 ESGPGLVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRD---TSKNQVFLKM 82 (257)
T ss_dssp EECCSEECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEE---TTTTEEEEEE
T ss_pred CCCCccccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEE---CCCCEEEEEE
Confidence 34456799999999999998874 688999985 21 111 0122222211 1123448999
Q ss_pred eccCCCCCeEEEEEEEcCCC-------ce--EEEEEEEEeccccC---------CCCCccccCCCeeeecCCCeEEEEEE
Q psy7036 74 DDVIETDAGLYKVKAKNKMG-------EV--AASINLNFSREQID---------GLAPTFLKKPSIRQEDDGKRLLFECR 135 (254)
Q Consensus 74 ~~~~~~d~G~Y~C~~~~~~~-------~~--~~~~~l~v~~~~~~---------~~~~~~~~~~~~~~~~~g~~~~l~C~ 135 (254)
.+++.+|+|.|+|.+.+..| .. .....|.|...... ..++.+...+....+.+|+.++|.|.
T Consensus 83 ~~v~~~DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~ 162 (257)
T 1f3r_B 83 NSLQTDDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRVTLSCK 162 (257)
T ss_dssp ESCCTTCCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCTTCCEEEEEE
T ss_pred CCCCcccCEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcCCCCEEEEEE
Confidence 99999999999999998753 11 13446666532100 00112223344566789999999999
Q ss_pred EeeCCCCeEEEEE--CCEeccc----C------CcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCC
Q psy7036 136 IQADPAPTVIWSH--SGVQVKE----D------KRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNEL 195 (254)
Q Consensus 136 ~~~~~~~~~~W~~--~~~~~~~----~------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~ 195 (254)
+.+.+.+.+.|+| ++..+.. . ...++.....+ ....|.|.+++.+|+|.|.|.|.|..
T Consensus 163 ~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~L~I~~v~~~D~G~Y~C~a~n~~ 232 (257)
T 1f3r_B 163 GSQNINNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSG--TDYTLTISSLQPEDVATYFCYQYNNG 232 (257)
T ss_dssp CSSCCBTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEB--TEEEEEECSCCGGGCSEEEEEEESSS
T ss_pred ECCcCCCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCC--CEEEEEECCCChhhCEEEEEEEeCCC
Confidence 9988888999999 4443210 0 01112111111 12379999999999999999999964
No 176
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.90 E-value=1.4e-22 Score=145.15 Aligned_cols=185 Identities=12% Similarity=0.122 Sum_probs=116.5
Q ss_pred CCCceeecCCCeEEEEEEEeeCCCC---ceEEEeCCEEeeeC--C------------cceEEEee----cCCcceEEEEE
Q psy7036 14 KPQLRQEDEGNRLIFECQLLCNPKP---DIVWFRGETQLSED--T------------RTVMKTTP----IGTNKYLVALE 72 (254)
Q Consensus 14 ~~~~~~v~~g~~v~l~C~~~~~~~~---~v~W~~~~~~~~~~--~------------~~~~~~~~----~~~~~~~~~l~ 72 (254)
.|..+.+.+|++|+|.|.+.+.+.+ .|+|+|++..+... . ..+..... .......++|.
T Consensus 7 vp~~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~ 86 (225)
T 4fmk_A 7 VLPEVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLA 86 (225)
T ss_dssp CCSEEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEE
T ss_pred eCCEEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEE
Confidence 4456788999999999999876655 48999976433110 0 00011000 01112234799
Q ss_pred EeccCCCCCeEEEEEEEcCCCceEE-EEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEE-eeCCCCeEEEEECC
Q psy7036 73 LDDVIETDAGLYKVKAKNKMGEVAA-SINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRI-QADPAPTVIWSHSG 150 (254)
Q Consensus 73 i~~~~~~d~G~Y~C~~~~~~~~~~~-~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~-~~~~~~~~~W~~~~ 150 (254)
|.+++.+|+|.|+|.+.+..+.... ...+.+. .++.............+..+.+.|.+ .+.|++.+.|++++
T Consensus 87 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~P~~~~~w~~~~ 160 (225)
T 4fmk_A 87 FRGLRVEDEGNYTCEFATFPNGTRRGVTWLRVI------AQPENHAEAQEVTIGPQSVAVARCVSTGGRPPARITWISSL 160 (225)
T ss_dssp ECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEE------BCCEEEEEECCBCCSSSCEEEEEEEEEEEBSCCEEEEECSS
T ss_pred EccCCHHHCcceEEEEEeCCCcceeeeeeeeee------cCCceeecccceeecceeeeeeeeeecCCCCCCEEEEEECC
Confidence 9999999999999999987765433 3333333 23333222233344556667777764 46788899999987
Q ss_pred EecccCCcceEEEcCCC-CceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEE
Q psy7036 151 VQVKEDKRHKFSIDKDG-HSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNF 206 (254)
Q Consensus 151 ~~~~~~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v 206 (254)
..+.... ......++ ....+.|.|.+++.+|.|.|+|.|.|..+.......+.+
T Consensus 161 ~~~~~~~--~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~~~~~v~l 215 (225)
T 4fmk_A 161 GGEAKDT--QEPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPILLPVTL 215 (225)
T ss_dssp CCEEEEE--EEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEEC
T ss_pred ccccCCc--ceEEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeEEEEEEEE
Confidence 6543221 11122222 233467999999999999999999999887655544444
No 177
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.90 E-value=1.7e-22 Score=143.84 Aligned_cols=177 Identities=14% Similarity=0.228 Sum_probs=114.8
Q ss_pred EeCCCceeecCCCeEEEEEEEeeC-------CCCceEEEeCCEE------eee---------CCcceEEEeecCCcceEE
Q psy7036 12 TQKPQLRQEDEGNRLIFECQLLCN-------PKPDIVWFRGETQ------LSE---------DTRTVMKTTPIGTNKYLV 69 (254)
Q Consensus 12 ~~~~~~~~v~~g~~v~l~C~~~~~-------~~~~v~W~~~~~~------~~~---------~~~~~~~~~~~~~~~~~~ 69 (254)
...|..+.+.+|++|+|.|.+.+. +.+.+.|||++.. +.. ....++....+ .....+
T Consensus 4 ~~~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~ 82 (214)
T 2zg1_A 4 LQVQKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGD-VQKKNC 82 (214)
T ss_dssp EECCSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSC-GGGTBC
T ss_pred eeCCcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEecc-CCCCeE
Confidence 456778899999999999998753 4678999998752 110 11122222211 111233
Q ss_pred EEEEeccCCCCCeEEEEEEEcCCCceE----EEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeC----CC
Q psy7036 70 ALELDDVIETDAGLYKVKAKNKMGEVA----ASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQAD----PA 141 (254)
Q Consensus 70 ~l~i~~~~~~d~G~Y~C~~~~~~~~~~----~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~----~~ 141 (254)
+|.|.+++.+|+|.|.|.+.+..+... ..+.|.|.... .+|.+.. +. .+.+|+.++|.|.+.+. |.
T Consensus 83 sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~---~~p~i~~-~~--~~~~G~~v~L~C~~~~~~~~~p~ 156 (214)
T 2zg1_A 83 SLSIGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALI---EKPDIHF-LE--PLESGRPTRLSCSLPGSCEAGPP 156 (214)
T ss_dssp CEEECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCC---CCCEEC---C--CCCTTCCEEEEEECTTCCSCSSC
T ss_pred EEEEccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCC---CCCceec-Cc--cccCCCeEEEEEEeccCCCCCCC
Confidence 799999999999999999998753221 35667776321 1333322 11 25689999999998764 78
Q ss_pred CeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEE
Q psy7036 142 PTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLN 205 (254)
Q Consensus 142 ~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~ 205 (254)
+.+.|++++....... ....+.|.|..+..+|.|.|+|.|.|..+.......+.
T Consensus 157 p~v~W~~~~~~~~~~~----------~~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~~~~~~~v~ 210 (214)
T 2zg1_A 157 LTFSWTGNALSPLDPE----------TTRSSELTLTPRPEDHGTNLTCQMKRQGAQVTTERTVQ 210 (214)
T ss_dssp CEEEEESSTTSSSCSS----------CCCSSEEEECCCTTCCSCEEEEEEECC----CCEEEEE
T ss_pred ceEEEeCCCCccCCCC----------ceeEEEEEEecccHHcCcEEEEEEEeCCCCcceEEEEE
Confidence 8999999885432111 01123799999999999999999999865544443343
No 178
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.90 E-value=4.7e-22 Score=145.43 Aligned_cols=185 Identities=17% Similarity=0.206 Sum_probs=120.3
Q ss_pred CCCeeEeCCCceeecCCCeEEEEEEEeeC--CCCceEEEeCC--E---Eeee--------------CCcceEEEeecCCc
Q psy7036 7 FAPSFTQKPQLRQEDEGNRLIFECQLLCN--PKPDIVWFRGE--T---QLSE--------------DTRTVMKTTPIGTN 65 (254)
Q Consensus 7 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~--~~~~v~W~~~~--~---~~~~--------------~~~~~~~~~~~~~~ 65 (254)
.+|.+...+..+.+.+|++|+|.|.+.+. +.+.+.|||.. . .+.. ..++.+.... .
T Consensus 5 ~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~---~ 81 (256)
T 3juy_B 5 HHQVQLVQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADT---S 81 (256)
T ss_dssp --CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEET---T
T ss_pred cceEEEEecCCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEec---C
Confidence 45677888999999999999999999873 57789999732 1 1100 1122222111 1
Q ss_pred ceEEEEEEeccCCCCCeEEEEEEEcC------------CCceEEEEEEEEeccccC---------CCCCccccCCCeeee
Q psy7036 66 KYLVALELDDVIETDAGLYKVKAKNK------------MGEVAASINLNFSREQID---------GLAPTFLKKPSIRQE 124 (254)
Q Consensus 66 ~~~~~l~i~~~~~~d~G~Y~C~~~~~------------~~~~~~~~~l~v~~~~~~---------~~~~~~~~~~~~~~~ 124 (254)
....+|.|.+++.+|+|.|.|.+.+. .........|.|...... ..++.+...+....+
T Consensus 82 ~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 161 (256)
T 3juy_B 82 ANTAYMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAPGTLSL 161 (256)
T ss_dssp TTEEEEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEECSEEEE
T ss_pred CCEEEEEECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecCCeEEE
Confidence 22347999999999999999999986 222334556777542110 013445555667788
Q ss_pred cCCCeEEEEEEEeeCCC-CeEEEEEC--CEeccc----------CCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEE
Q psy7036 125 DDGKRLLFECRIQADPA-PTVIWSHS--GVQVKE----------DKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTA 191 (254)
Q Consensus 125 ~~g~~~~l~C~~~~~~~-~~~~W~~~--~~~~~~----------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~ 191 (254)
.+|+.++|.|.+.+.+. +.+.|+|. +..... ....++....++. ...|.|.+++.+|+|.|.|.+
T Consensus 162 ~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~~~L~I~~v~~~DsG~Y~C~~ 239 (256)
T 3juy_B 162 SPGERATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGT--DFTLTITRVEPEDFALYYCQV 239 (256)
T ss_dssp CTTSCEEEEEEESSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETT--EEEEEESSCCGGGCSEEEEEE
T ss_pred eCCCCEEEEEEECCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCC--EEEEEECCCCHhHCEEEEEEE
Confidence 89999999999988776 89999983 221110 0011111111111 236999999999999999999
Q ss_pred EcCCC
Q psy7036 192 KNELG 196 (254)
Q Consensus 192 ~~~~~ 196 (254)
.|...
T Consensus 240 ~~~~~ 244 (256)
T 3juy_B 240 YGASS 244 (256)
T ss_dssp CCSSC
T ss_pred eeCCC
Confidence 88543
No 179
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.90 E-value=2.2e-22 Score=144.52 Aligned_cols=188 Identities=12% Similarity=0.195 Sum_probs=115.6
Q ss_pred eCCCceeecCCCeEEEEEEEeeCC--CCceEEEeCC--EE---ee--e------------CCcceEEEeecCCcceEEEE
Q psy7036 13 QKPQLRQEDEGNRLIFECQLLCNP--KPDIVWFRGE--TQ---LS--E------------DTRTVMKTTPIGTNKYLVAL 71 (254)
Q Consensus 13 ~~~~~~~v~~g~~v~l~C~~~~~~--~~~v~W~~~~--~~---~~--~------------~~~~~~~~~~~~~~~~~~~l 71 (254)
..|....+.+|++|+|.|.+.+.+ .+.+.|||++ .. +. . ..++.+... . .....+|
T Consensus 5 ~qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~--~-~~~~~sL 81 (227)
T 1mju_H 5 QQPGAELVKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVD--T-SSSTAYM 81 (227)
T ss_dssp ECCSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEE--T-TTTEEEE
T ss_pred cCCCCeEEcCCCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEe--C-CCCeEEE
Confidence 456677899999999999998766 6789999853 21 10 0 122222211 1 1234589
Q ss_pred EEeccCCCCCeEEEEEEEcCCCc-eEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeC-CCC-eEEEEE
Q psy7036 72 ELDDVIETDAGLYKVKAKNKMGE-VAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQAD-PAP-TVIWSH 148 (254)
Q Consensus 72 ~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~-~~~W~~ 148 (254)
.|.+++.+|+|.|.|.+.+..+. ......|.|... ...+|.+........+..|+.++|.|.+.+. |.+ .+.|++
T Consensus 82 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~--~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~ 159 (227)
T 1mju_H 82 QLSSLTSDDSAVYYCANKLGWFPYWGQGTLVTVSAA--KTTAPSVYPLAPVCGDTSGSSVTLGCLVKGYFPEPVTLTWNS 159 (227)
T ss_dssp EECSCCGGGCEEEEEEEEETTEEEECCCEEEEECSS--CCBCCEEEEECCCC------CEEEEEEEEEEBSSCCEEEEGG
T ss_pred EECCCCcccCEEEEEEECCCCceEEcCcEEEEEcCC--CCCCCEEEEecCCccccCCCcEEEEEEeecEeCCCeEEEEec
Confidence 99999999999999999875321 112346676531 1123333222112235579999999999885 666 899999
Q ss_pred CCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEe
Q psy7036 149 SGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFD 207 (254)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~ 207 (254)
++..+......... ..+.+...+.|.|.....+| |.|+|.|.|..+.......+.+.
T Consensus 160 ~g~~~~~~~~~~~~-~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~~~~~ 216 (227)
T 1mju_H 160 GSLSSGVHTFPAVL-QSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPR 216 (227)
T ss_dssp GTBCTTEEECCCEE-ETTEEEEEEEEEECTTTTTT-SCCEEEEEEGGGTEEEEEECCCC
T ss_pred CCCcCCcEECCcee-cCCeEEEEEEEEEchhhcCC-CeEEEEEEECCCCcceEEEeCCC
Confidence 98764311111111 11212234579999988888 99999999977665555555443
No 180
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.89 E-value=2.7e-24 Score=163.64 Aligned_cols=182 Identities=16% Similarity=0.253 Sum_probs=132.0
Q ss_pred eeecCCCeEEEEEE-----EeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEEEEEcCC
Q psy7036 18 RQEDEGNRLIFECQ-----LLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKVKAKNKM 92 (254)
Q Consensus 18 ~~v~~g~~v~l~C~-----~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~ 92 (254)
..+.+|+.+.|.|. +.+.|.+.+.|++++..+..... +....... ..|.|.+++..|+|.|+|.+.|..
T Consensus 130 ~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~~-~~~~~~~~-----~~L~i~~v~~~d~G~Y~C~a~n~~ 203 (339)
T 3o4o_C 130 QILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNE-KFLSVRGT-----THLLVHDVALEDAGYYRCVLTFAH 203 (339)
T ss_dssp EEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTCS-SEEECTTS-----SEEEESSCCGGGCEEEEEEEECCB
T ss_pred eEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCCCCc-eeEEcCCc-----ceEEEcccCHhhCeEEEEEEEECC
Confidence 46789999999999 77788999999999988765422 22222111 179999999999999999999987
Q ss_pred Cc----eEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEE---eeCC-CCeEEEEECCEecccCCc------
Q psy7036 93 GE----VAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRI---QADP-APTVIWSHSGVQVKEDKR------ 158 (254)
Q Consensus 93 ~~----~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~---~~~~-~~~~~W~~~~~~~~~~~~------ 158 (254)
+. ....+.|.|..... ..+|.+...+....+..|+.+.|.|.+ .+.| .+.+.|++++..+.....
T Consensus 204 g~~~~~~~~~~~l~V~~~~~-~~~P~i~~~~~~~~v~~G~~v~L~C~~~~~~g~P~~~~v~W~~~g~~~~~~~~~~~~~~ 282 (339)
T 3o4o_C 204 EGQQYNITRSIELRIKKKKE-ETIPVIISPLKTISASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHIESAYPGGRVTE 282 (339)
T ss_dssp TTBCCEEEEEEEEEEECCCC-CCCCEECCCSCCCCCCCCSCCCCCCCEEESSSCCSSCEEEEESSSSCSSSSSCSSSCEE
T ss_pred CCeEEEEEEEEEEEEEcCCC-CCCCEEecCCceeEeccCCCEEEEEEEECCCCCCCCceEEEEECCeeccccccccccee
Confidence 63 45567777764221 124555555555677889999999999 7888 789999999877643211
Q ss_pred -ceEEEcCCCC-ceeeEEEEccCCCCCc-eeEEEEEEcCCCcceEEEEEEE
Q psy7036 159 -HKFSIDKDGH-SYFASLEIIDVTIEDA-GKYKVTAKNELGESNATISLNF 206 (254)
Q Consensus 159 -~~~~~~~~~~-~~~~~l~i~~~~~~d~-G~y~C~~~~~~~~~~~~~~~~v 206 (254)
.......++. ...+.|.|.++..+|. |.|+|.|.|..|.......+.+
T Consensus 283 ~~~~~~~~~g~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~~~~ 333 (339)
T 3o4o_C 283 GPRQEYSENNENYIEVPLIFDPVTREDLHMDFKCVVHNTLSFQTLRTTVKE 333 (339)
T ss_dssp CCCEECCCSSSCEEEECCEECSSCCCSCCCCCEEEEEETTEEECCBCCCCC
T ss_pred cceEEecccCceEEEEEEEEEEechhhcCccEEEEEEeccCceEEEEEhhH
Confidence 1112222222 2334799999999997 9999999999998877665543
No 181
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.89 E-value=6.7e-22 Score=141.29 Aligned_cols=181 Identities=15% Similarity=0.203 Sum_probs=116.8
Q ss_pred CCCceeecCCCeEEEEEEEeeCC--CCceEEEeCC--E---Eee-e-----------CCcceEEEeecCCcceEEEEEEe
Q psy7036 14 KPQLRQEDEGNRLIFECQLLCNP--KPDIVWFRGE--T---QLS-E-----------DTRTVMKTTPIGTNKYLVALELD 74 (254)
Q Consensus 14 ~~~~~~v~~g~~v~l~C~~~~~~--~~~v~W~~~~--~---~~~-~-----------~~~~~~~~~~~~~~~~~~~l~i~ 74 (254)
.|....+.+|++|+|.|.+.+.+ .+.+.|||.. . .+. . ....++....+ ......+|.|.
T Consensus 6 q~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~~L~I~ 84 (220)
T 2fbj_H 6 ESGGGLVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRD-NAKNSLYLQMS 84 (220)
T ss_dssp EECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEC-SSSCEEEEEEC
T ss_pred cCCCeEecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEee-CCCCEEEEEEC
Confidence 34567899999999999998755 5789999843 1 111 0 01112222221 12234589999
Q ss_pred ccCCCCCeEEEEEEEcCCCc---eEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeC-CC--CeEEEEE
Q psy7036 75 DVIETDAGLYKVKAKNKMGE---VAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQAD-PA--PTVIWSH 148 (254)
Q Consensus 75 ~~~~~d~G~Y~C~~~~~~~~---~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~--~~~~W~~ 148 (254)
+++.+|+|.|.|.+.+..+. ......|.|.... ..+|.+...+ ...+..|+.++|.|.+.+. |. +.+.|++
T Consensus 85 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~--~~~P~v~~~~-~~~~~~g~~v~L~C~~~g~~P~~~~~v~W~~ 161 (220)
T 2fbj_H 85 KVRSEDTALYYCARLHYYGYNAYWGQGTLVTVSAES--ARNPTIYPLT-LPPALSSDPVIIGCLIHDYFPSGTMNVTWGK 161 (220)
T ss_dssp SCCGGGCEEEEEEEEETTTEEEEECCCEEEEECSSC--CBCCEEEEEC-CCSSSCCSSEEEEEEEEEEBSCCCEEEEESC
T ss_pred CCChhhCEEEEEEEeccccccceecCCEEEEecCCC--CCCCEEEEee-cccccCCCcEEEEEEEEeEECCCcEEEEEec
Confidence 99999999999999986542 1234567775311 1234333222 2235679999999999886 65 6899999
Q ss_pred CCEecccCCcceEEEcCCC-CceeeEEEEccCCCCCceeEEEEEEcCCCcce
Q psy7036 149 SGVQVKEDKRHKFSIDKDG-HSYFASLEIIDVTIEDAGKYKVTAKNELGESN 199 (254)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~ 199 (254)
++..+..... ......++ +...+.|.|.....+|.|.|+|.|.|..+...
T Consensus 162 ~~~~~~~~~~-~~~~~~~g~~~~~s~L~i~~~~~~d~g~ytC~v~n~~~~~~ 212 (220)
T 2fbj_H 162 SGKDITTVNF-PPALASGGRYTMSNQLTLPAVECPEGESVKCSVQHDSNPVQ 212 (220)
T ss_dssp CCSSCEEEEC-CCEECSSSCEEEEEEEEECGGGSCTTCEEEEEEEETTSCCE
T ss_pred CCEecceEec-CceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCceE
Confidence 9876521111 11112222 23345799998888899999999999887644
No 182
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.89 E-value=6.8e-23 Score=145.13 Aligned_cols=188 Identities=14% Similarity=0.191 Sum_probs=110.2
Q ss_pred CeeEeCCCceee--cCCCeEEEEEEEeeCC----CCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCe
Q psy7036 9 PSFTQKPQLRQE--DEGNRLIFECQLLCNP----KPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAG 82 (254)
Q Consensus 9 p~~~~~~~~~~v--~~g~~v~l~C~~~~~~----~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G 82 (254)
|.+...|....+ .+|++++|.|.+.|.+ ...|+|+|++..+............++.......|.|......|+|
T Consensus 2 P~v~~~pps~~~~~~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~g 81 (207)
T 1l6x_A 2 PSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGK 81 (207)
T ss_dssp CEEEEECCCHHHHHCTTSCCEEEEEEEEECSSSCCCEEEEEETTEEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTC
T ss_pred CeEEEeCcChHHheecCCceEEEEEEecccCCCCCeEEEEEECCccccCcccCCceeccCCcEEEEEEEEEEHHHccCCc
Confidence 444443433333 7999999999998854 3589999999877543211111111222122223445444455699
Q ss_pred EEEEEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeC-CC-CeEEEEECCEecccCCcce
Q psy7036 83 LYKVKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQAD-PA-PTVIWSHSGVQVKEDKRHK 160 (254)
Q Consensus 83 ~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~-~~~~W~~~~~~~~~~~~~~ 160 (254)
.|+|.+.|..+.......+.+. .....+|.+...........|..+.|.|.+.+. |. +.+.|+++|..+.......
T Consensus 82 ~Y~C~a~n~~~~~~~~~~v~~~--~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~ 159 (207)
T 1l6x_A 82 EYKCKVSNKALPAPIEKTISKA--KGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTP 159 (207)
T ss_dssp CEEEEEECTTSSSCEEEEECCC--CSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECC
T ss_pred eEEEEEEcCcCCcceEEEeccC--CCCCcCCEEEEECCChHHhcCCcEEEEEEEeCeECCCeEEEEEECCeeccCccccC
Confidence 9999999987754223233210 011134443322221112245669999999985 44 4899999998875322222
Q ss_pred EEEcCCCC-ceeeEEEEccCCCCCceeEEEEEEcCCCcc
Q psy7036 161 FSIDKDGH-SYFASLEIIDVTIEDAGKYKVTAKNELGES 198 (254)
Q Consensus 161 ~~~~~~~~-~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~ 198 (254)
.....++. ...+.|.|.....+|.|.|+|.|.|.....
T Consensus 160 ~~~~~~gt~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~~ 198 (207)
T 1l6x_A 160 PVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHN 198 (207)
T ss_dssp CEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSGG
T ss_pred ceECCCCCEEEEEEEEECHHHcCCCCEEEEEEEcCCcCC
Confidence 22233432 334556676666678999999999987654
No 183
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.89 E-value=6.9e-23 Score=147.95 Aligned_cols=193 Identities=13% Similarity=0.176 Sum_probs=118.1
Q ss_pred CCCee-EeCCCcee-ecCCCeEEEEEEEeeC---CCC-ceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCC
Q psy7036 7 FAPSF-TQKPQLRQ-EDEGNRLIFECQLLCN---PKP-DIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETD 80 (254)
Q Consensus 7 ~~p~~-~~~~~~~~-v~~g~~v~l~C~~~~~---~~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d 80 (254)
..|.+ ...+.... +.+|++++|.|.+.+. |.+ .|+|||++..+.............+.....+.|.|.+++..|
T Consensus 14 ~~P~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D 93 (239)
T 1i1c_A 14 EVSSVFIFPPKTKDVLGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLN 93 (239)
T ss_dssp ---CEEEECCCHHHHTTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHT
T ss_pred cCCEEEEECCChHHhcccCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHccC
Confidence 34544 44444433 7899999999999876 665 899999986654321111111112222344589999999999
Q ss_pred CeEEEEEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeC-CC-CeEEEEECCEecccCCc
Q psy7036 81 AGLYKVKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQAD-PA-PTVIWSHSGVQVKEDKR 158 (254)
Q Consensus 81 ~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~-~~~~W~~~~~~~~~~~~ 158 (254)
+|.|+|.+.+..+.......+... .....+|.+...+.......|+.+.|.|.+.++ |. ..+.|+++|..+.....
T Consensus 94 ~g~Y~C~~~~~~~~~~~~~~v~~~--~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~ 171 (239)
T 1i1c_A 94 GKTFKCKVNSGAFPAPIEKSISKP--EGTPRGPQVYTMAPPKEEMTQSQVSITCMVKGFYPPDIYTEWKMNGQPQENYKN 171 (239)
T ss_dssp TCCEEEEEECSSSSSCEEEEECCC--SSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEE
T ss_pred CCeEEEEEecccCCCCcEEEEecC--CCCCcCCEEEEECCChHHhcCCcEEEEEEEeeeECCCeEEEEEECCEECCCcee
Confidence 999999999987754222222210 011234443322222222347889999999884 44 47999999998754322
Q ss_pred ceEEEcCCCC-ceeeEEEEccCCCCCceeEEEEEEcCCCcceEE
Q psy7036 159 HKFSIDKDGH-SYFASLEIIDVTIEDAGKYKVTAKNELGESNAT 201 (254)
Q Consensus 159 ~~~~~~~~~~-~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~ 201 (254)
.......++. ...+.|.|.....+|.|.|+|.|.|........
T Consensus 172 ~~~~~~~dgt~~~~s~l~v~~~~~~~~g~YtC~v~n~~l~~~~~ 215 (239)
T 1i1c_A 172 TPPTMDTDGSYFLYSKLNVKKETWQQGNTFTCSVLHEGLENEHT 215 (239)
T ss_dssp CCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSGGGEE
T ss_pred cCceECCCCCEEEEEEEEEChhhcCCCCEEEEEEECCCCCCCcE
Confidence 2222333432 334556676655667999999999987654433
No 184
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.89 E-value=3.7e-23 Score=149.27 Aligned_cols=188 Identities=16% Similarity=0.193 Sum_probs=118.8
Q ss_pred CeeEeCCCceeecCCCeEEEEEEEeeCC-CC-ceEEEeCC--EEe---ee-------CCcceEEEeecCCcceEEEEEEe
Q psy7036 9 PSFTQKPQLRQEDEGNRLIFECQLLCNP-KP-DIVWFRGE--TQL---SE-------DTRTVMKTTPIGTNKYLVALELD 74 (254)
Q Consensus 9 p~~~~~~~~~~v~~g~~v~l~C~~~~~~-~~-~v~W~~~~--~~~---~~-------~~~~~~~~~~~~~~~~~~~l~i~ 74 (254)
+.+.+ |....+.+|++++|.|.+.+.+ .+ .+.|||++ ..+ .. ....++.... ......|.|.
T Consensus 21 ~~v~~-p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~---~~~~~~L~I~ 96 (234)
T 2j6e_L 21 SVLTQ-PPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSK---SGTSASLAIS 96 (234)
T ss_dssp CCCBC-CSCCCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEE---ETTEEEEEEE
T ss_pred cEEeC-CCcEEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEe---cCCeEEEEEC
Confidence 34455 7778899999999999998744 34 69999863 211 10 0011121111 1123489999
Q ss_pred ccCCCCCeEEEEEEEcCCCc---eEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCC--CeEEEEEC
Q psy7036 75 DVIETDAGLYKVKAKNKMGE---VAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPA--PTVIWSHS 149 (254)
Q Consensus 75 ~~~~~d~G~Y~C~~~~~~~~---~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~--~~~~W~~~ 149 (254)
+++.+|+|.|+|.+.+..+. ......|.|.... ..+|.+...........|+.++|.|.+.+.++ +.+.|+++
T Consensus 97 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~--~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~ 174 (234)
T 2j6e_L 97 GLRSEDEADYYCATWDDSLSAVIFGGGTKLTVLGQP--KAAPSVTLFPPSSEELQANKATLVCLISDFFPGAVTVAWKAD 174 (234)
T ss_dssp SCCSTTCSEEEEEEEETTTTEEEECCCBCCCBCCCC--CCCCCCCEECCCHHHHTTSCCCEEECCCBCSSCCCEEEEEET
T ss_pred CCCHHHCEEEEEEEEcCCcceeEecCCEEEEEecCC--CCCCcccccCCChhHhcCCceEEEEEEEEEcCCceEEEEEEC
Confidence 99999999999999988762 1223445553211 12343332222222345889999999988644 38999999
Q ss_pred CEecccCCcc-eEEEcCCC-CceeeEEEEccCCCCCceeEEEEEEcCCCcceEEE
Q psy7036 150 GVQVKEDKRH-KFSIDKDG-HSYFASLEIIDVTIEDAGKYKVTAKNELGESNATI 202 (254)
Q Consensus 150 ~~~~~~~~~~-~~~~~~~~-~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~ 202 (254)
+..+...... ......++ +...+.|.|.+...+|.|.|+|.|.|......+++
T Consensus 175 g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~ 229 (234)
T 2j6e_L 175 GAPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTV 229 (234)
T ss_dssp TEECCSSEEECCCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTBCCCEEE
T ss_pred CEECCCCccccCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCCceEEec
Confidence 9987543211 01111122 22345799999999999999999999877655443
No 185
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.89 E-value=1.3e-21 Score=140.01 Aligned_cols=186 Identities=11% Similarity=0.150 Sum_probs=116.2
Q ss_pred CCCceeecCCCeEEEEEEEeeCC--CCceEEEeCC--E---Eeee------------CCcceEEEeecCCcceEEEEEEe
Q psy7036 14 KPQLRQEDEGNRLIFECQLLCNP--KPDIVWFRGE--T---QLSE------------DTRTVMKTTPIGTNKYLVALELD 74 (254)
Q Consensus 14 ~~~~~~v~~g~~v~l~C~~~~~~--~~~v~W~~~~--~---~~~~------------~~~~~~~~~~~~~~~~~~~l~i~ 74 (254)
.|..+.+.+|++|+|.|.+.+.+ .+.+.|||.+ . .+.. ....++....+. .....+|.|.
T Consensus 6 qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~-~~~~~sL~I~ 84 (223)
T 1dee_B 6 ESGGGVVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDN-SKNTLYLQMN 84 (223)
T ss_dssp EECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEET-TTTEEEEEEC
T ss_pred cCCCEEEcCCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecC-CCCEEEEEEC
Confidence 34577899999999999998755 4789999843 1 1110 011122222111 1224589999
Q ss_pred ccCCCCCeEEEEEEEcCCC----c--eEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeC-CCC-eEEE
Q psy7036 75 DVIETDAGLYKVKAKNKMG----E--VAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQAD-PAP-TVIW 146 (254)
Q Consensus 75 ~~~~~d~G~Y~C~~~~~~~----~--~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~-~~~W 146 (254)
+++.+|+|.|.|.+.+..+ . ......|.|... ...+|.+........+..|+.++|.|.+.+. |.+ .+.|
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~--~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W 162 (223)
T 1dee_B 85 SLRAEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSG--SASAPTLFPLVSCENSNPSSTVAVGCLAQDFLPDSITFSW 162 (223)
T ss_dssp SCCGGGCEEEEEEEESSSSTTCCEEEECCCEEEEECSS--CCBCCEEEEEECTTCCCSSSEEEEEEEEEEEBSSCCEEEE
T ss_pred CCCHHHCEEEEEEEeccccCcccceeecCcEEEEEccC--CCCCCEEEEecCCcccCCCCcEEEEEEEEEEeCCCeEEEe
Confidence 9999999999999998653 1 112346777521 1123333221111224578999999999886 766 8999
Q ss_pred EE-CCEecccCCcceEEEcCCCCceeeEEEEccCCC--CCceeEEEEEEcCCCcceEEE
Q psy7036 147 SH-SGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTI--EDAGKYKVTAKNELGESNATI 202 (254)
Q Consensus 147 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~--~d~G~y~C~~~~~~~~~~~~~ 202 (254)
++ ++..+..............+...+.|.|..... +|.|.|+|.|.|..+.....+
T Consensus 163 ~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~~~~~~ 221 (223)
T 1dee_B 163 KYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVAQGTNEHVVCKVQHPNGNKEKDV 221 (223)
T ss_dssp EETTSCBCSCEEECCCEEETTEEEEEEEEEEECTTTTSTTCCEEEEEEECTTCCEEEEE
T ss_pred EccCCCccceeEECCccccCCeEEEEEEEEEcHHHhccCCCCEEEEEEEeCCCCCcccc
Confidence 99 887764310000001111222345788887766 789999999999988765544
No 186
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.89 E-value=8.4e-22 Score=144.09 Aligned_cols=190 Identities=15% Similarity=0.228 Sum_probs=120.2
Q ss_pred CCCceeecCCCeEEEEEEEeeCC--CCceEEEeCC--E---Ee-e-------------eCCcceEEEeecCCcceEEEEE
Q psy7036 14 KPQLRQEDEGNRLIFECQLLCNP--KPDIVWFRGE--T---QL-S-------------EDTRTVMKTTPIGTNKYLVALE 72 (254)
Q Consensus 14 ~~~~~~v~~g~~v~l~C~~~~~~--~~~v~W~~~~--~---~~-~-------------~~~~~~~~~~~~~~~~~~~~l~ 72 (254)
.+....+.+|++|+|.|.+.+.+ .+.+.|||.. . .+ . ...++.+.... ......|.
T Consensus 8 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~---~~~~~~L~ 84 (256)
T 3umt_A 8 QSGLELVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDK---SSSTAYLE 84 (256)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEG---GGTEEEEE
T ss_pred ccCceEEcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEec---CCCEEEEE
Confidence 34456799999999999998755 6789999732 1 11 0 01222222111 12234799
Q ss_pred EeccCCCCCeEEEEEEEcC----CCceEEEEEEEEeccc----------cCCCCCccccCCCeeeecCCCeEEEEEEEee
Q psy7036 73 LDDVIETDAGLYKVKAKNK----MGEVAASINLNFSREQ----------IDGLAPTFLKKPSIRQEDDGKRLLFECRIQA 138 (254)
Q Consensus 73 i~~~~~~d~G~Y~C~~~~~----~~~~~~~~~l~v~~~~----------~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~ 138 (254)
|.+++.+|+|.|.|.+.+. .+.......|.|.... ....++.+...+....+.+|+.++|.|.+.+
T Consensus 85 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~ 164 (256)
T 3umt_A 85 LRSLTSEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSSLSASLGERVSITCRASQ 164 (256)
T ss_dssp ECSCCGGGCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEECSEEEECTTCCEEEEEEESS
T ss_pred ECCCCcccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCCeEEEECCCCEEEEEEEec
Confidence 9999999999999999987 2223345667775310 0001445555566678889999999999999
Q ss_pred CCCCeEEEEECC--Eecc----------cCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcc-eEEEEEE
Q psy7036 139 DPAPTVIWSHSG--VQVK----------EDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGES-NATISLN 205 (254)
Q Consensus 139 ~~~~~~~W~~~~--~~~~----------~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~-~~~~~~~ 205 (254)
.+.+.+.|+|+. .... .....++.....+ ....|.|.+++.+|+|.|.|.+.+..... .....|.
T Consensus 165 ~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~L~ 242 (256)
T 3umt_A 165 DIGSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSG--SDYSLTISSLESEDFVDYYCLQYASSPPTFGGGTKLE 242 (256)
T ss_dssp CCTTCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEET--TEEEEEECSCCGGGCSEEEEEECSSSSCEECCCEEEE
T ss_pred CCCcEEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCC--CEEEEEECCCChhHCEEEEEEEeeCCCcEECCCEEEE
Confidence 888899999842 1111 0001112111111 12369999999999999999999864432 3345566
Q ss_pred Eec
Q psy7036 206 FDS 208 (254)
Q Consensus 206 v~~ 208 (254)
|..
T Consensus 243 V~~ 245 (256)
T 3umt_A 243 IKR 245 (256)
T ss_dssp EC-
T ss_pred EEC
Confidence 653
No 187
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.89 E-value=1.9e-21 Score=142.25 Aligned_cols=193 Identities=18% Similarity=0.223 Sum_probs=120.1
Q ss_pred eeEeCCCceeecCCCeEEEEEEEeeC--CCCceEEEeCC--E---Ee---e----------eCCcceEEEeecCCcceEE
Q psy7036 10 SFTQKPQLRQEDEGNRLIFECQLLCN--PKPDIVWFRGE--T---QL---S----------EDTRTVMKTTPIGTNKYLV 69 (254)
Q Consensus 10 ~~~~~~~~~~v~~g~~v~l~C~~~~~--~~~~v~W~~~~--~---~~---~----------~~~~~~~~~~~~~~~~~~~ 69 (254)
.....|....+.+|++|+|.|.+.+. +.+.+.|||.. . .+ . ...++.+.... .....
T Consensus 10 v~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~---~~~~~ 86 (257)
T 3gkz_A 10 VQLQESGPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDT---SKNQV 86 (257)
T ss_dssp EEEEEECCSEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEG---GGTEE
T ss_pred EEEECCCCeEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEec---CCceE
Confidence 34456667789999999999999884 47889999832 1 11 0 01122222111 12244
Q ss_pred EEEEeccCCCCCeEEEEEEEcCCC----ceEEEEEEEEecccc--------CCCCCccccCCCeeeecCCCeEEEEEEEe
Q psy7036 70 ALELDDVIETDAGLYKVKAKNKMG----EVAASINLNFSREQI--------DGLAPTFLKKPSIRQEDDGKRLLFECRIQ 137 (254)
Q Consensus 70 ~l~i~~~~~~d~G~Y~C~~~~~~~----~~~~~~~l~v~~~~~--------~~~~~~~~~~~~~~~~~~g~~~~l~C~~~ 137 (254)
+|.|.+++.+|+|.|+|.+.+..+ .......|.|..... ...++.+...+....+.+|+.++|.|.+.
T Consensus 87 ~L~I~~v~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~ 166 (257)
T 3gkz_A 87 YLQLKSVSSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMSASPGEKVTLTCSAS 166 (257)
T ss_dssp EEEECSCCGGGCEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSEEEECTTCCEEEEEEES
T ss_pred EEEECCCChhhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCceEEEeCCCcEEEEEEEc
Confidence 799999999999999999998621 122345666653200 01234445556667888999999999998
Q ss_pred eCCCC-eEEEEEC--CEeccc---C-------CcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcc-eEEEE
Q psy7036 138 ADPAP-TVIWSHS--GVQVKE---D-------KRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGES-NATIS 203 (254)
Q Consensus 138 ~~~~~-~~~W~~~--~~~~~~---~-------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~-~~~~~ 203 (254)
+.+.+ .+.|+|+ +..... . ...++.....+ ....|.|.+++.+|+|.|.|.+.+..... ..-..
T Consensus 167 ~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~ 244 (257)
T 3gkz_A 167 SSVSSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSG--TSYSLTISSMEAEDAASYFCHQWSSFPFTFGSGTK 244 (257)
T ss_dssp SCCCGGGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET--TEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEE
T ss_pred cCccceEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCC--CEEEEEECCCChHHCEEEEEEEccCCceEEcCCEE
Confidence 88777 8999984 221110 0 00111111111 12369999999999999999998754321 23334
Q ss_pred EEEe
Q psy7036 204 LNFD 207 (254)
Q Consensus 204 ~~v~ 207 (254)
|.|.
T Consensus 245 l~v~ 248 (257)
T 3gkz_A 245 LEIK 248 (257)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 5554
No 188
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.89 E-value=8e-22 Score=142.98 Aligned_cols=181 Identities=16% Similarity=0.184 Sum_probs=115.1
Q ss_pred CeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCC-----EEeee---------CCcceEEEeecCCcceEEEEEEe
Q psy7036 9 PSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGE-----TQLSE---------DTRTVMKTTPIGTNKYLVALELD 74 (254)
Q Consensus 9 p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~-----~~~~~---------~~~~~~~~~~~~~~~~~~~l~i~ 74 (254)
+.+.+.|....+.+|++|+|.|.+.+.+.+.+.|+|++ ..+.. ..++.+. .. .....|.|.
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~--~~---~~~~~L~I~ 76 (242)
T 2znx_A 2 IVLTQSPATLSVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGS--GS---GTDFTLSIN 76 (242)
T ss_dssp CCEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEE--EE---TTEEEEEES
T ss_pred CcEEEcCCeEEEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEe--cC---CCEEEEEEC
Confidence 45678888899999999999999988888899999853 11111 1222221 11 123479999
Q ss_pred ccCCCCCeEEEEEEEcCCCc-eEEEEEEEEeccccC-------CCCCccccCCCeeeecCCCeEEEEEEEeeCC--CCeE
Q psy7036 75 DVIETDAGLYKVKAKNKMGE-VAASINLNFSREQID-------GLAPTFLKKPSIRQEDDGKRLLFECRIQADP--APTV 144 (254)
Q Consensus 75 ~~~~~d~G~Y~C~~~~~~~~-~~~~~~l~v~~~~~~-------~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~--~~~~ 144 (254)
+++.+|+|.|.|.+.+..+. ......|.|...+.. ..++.....+....+.+|+.++|.|.+.+.+ .+.+
T Consensus 77 ~v~~~D~G~Y~C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~v 156 (242)
T 2znx_A 77 SVETEDFGMYFCQQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKPSQTLSLTCSVTGDSITSDYX 156 (242)
T ss_dssp SCCGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEEECCSEECTTSCEEEEEEEESSCGGGSCE
T ss_pred CCChHHCEEEEEeEecCCceEECCCEEEEEcCCCCCCcccccccccceeeecCCcceecCCCeEEEEEEEEccccCCcce
Confidence 99999999999999987543 123456666532110 0011112222234578999999999998876 4789
Q ss_pred EEEECC--Eecc------cC--------CcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcC
Q psy7036 145 IWSHSG--VQVK------ED--------KRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNE 194 (254)
Q Consensus 145 ~W~~~~--~~~~------~~--------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~ 194 (254)
.|+|+. ..+. .. ...++....+.......|.|.+++.+|+|.|.|.+.|.
T Consensus 157 ~W~k~~~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~ 222 (242)
T 2znx_A 157 SXIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTATYYCANXDG 222 (242)
T ss_dssp EEEEECTTSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGGCEEEEEEETTS
T ss_pred eeEeeCCCCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCcCEEEEEeccCC
Confidence 999853 2210 00 01122222111111247999999999999999999874
No 189
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.89 E-value=2.1e-23 Score=149.34 Aligned_cols=185 Identities=14% Similarity=0.165 Sum_probs=120.3
Q ss_pred CCCceeecCCCeEEEEEEEee-CCCC----ceEEEeCCEEee-----e--------CCcceEEEeecCCcceEEEEEEec
Q psy7036 14 KPQLRQEDEGNRLIFECQLLC-NPKP----DIVWFRGETQLS-----E--------DTRTVMKTTPIGTNKYLVALELDD 75 (254)
Q Consensus 14 ~~~~~~v~~g~~v~l~C~~~~-~~~~----~v~W~~~~~~~~-----~--------~~~~~~~~~~~~~~~~~~~l~i~~ 75 (254)
.|..+.+.+|++++|.|.+.+ .+.+ .+.|+|++.... . ..+..+............+|.|.+
T Consensus 5 ~p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~ 84 (221)
T 3eow_R 5 APTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFG 84 (221)
T ss_dssp CCCCCCCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCC
T ss_pred CCCcEEEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEcc
Confidence 345667889999999999954 4443 399999864210 0 122222110000011233899999
Q ss_pred cCCCCCeEEEEEEEcCC-CceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeE-EEEEEEe-eCCCCeEEEEECCEe
Q psy7036 76 VIETDAGLYKVKAKNKM-GEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRL-LFECRIQ-ADPAPTVIWSHSGVQ 152 (254)
Q Consensus 76 ~~~~d~G~Y~C~~~~~~-~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~-~l~C~~~-~~~~~~~~W~~~~~~ 152 (254)
++.+|+|.|+|.+.+.. +.....+.|.|. .+|.+........ ..|+.+ .|.|.+. +.|.+.+.|++++..
T Consensus 85 v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~------~~P~~~~~~~~~~-~~g~~~~~l~C~~~~g~P~p~v~W~k~~~~ 157 (221)
T 3eow_R 85 LRVEDEGSYTCLFVTFPQGSRSVDIWLRVL------AKPQNTAEVQKVQ-LTGEPVPMARCVSTGGRPPAQITWHSDLGG 157 (221)
T ss_dssp SSCCCCSCBEEEEEESSSCSCEEECCCCCC------CCCEEEEEEECCC-CCSSSCCEEEEEEESCSSCCCEEEECSSSC
T ss_pred CChHHCeEEEEEEEeCCCCceEEEEEEEEE------ECCCceeecCCcc-cCCceEEEEEEECCCccCCCeeEEEeCCCC
Confidence 99999999999999876 666666777765 2444332211111 567788 5999987 789999999987543
Q ss_pred cccCCcceEEEc-CCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEe
Q psy7036 153 VKEDKRHKFSID-KDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFD 207 (254)
Q Consensus 153 ~~~~~~~~~~~~-~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~ 207 (254)
..... ..... .......+.|.|.+...+|.|.|+|.|.|..+.....+.|...
T Consensus 158 ~~~~~--~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~~~~~~~v~~~ 211 (221)
T 3eow_R 158 MPQTS--QVPGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFEKPQLLTVSLT 211 (221)
T ss_dssp CCCCE--EECCCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCSSSCEEEEECCC
T ss_pred CCccc--eeecCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCCCCeEEEEEEE
Confidence 32211 11111 1222345689999999999999999999998877777665543
No 190
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.89 E-value=1.9e-22 Score=144.69 Aligned_cols=179 Identities=13% Similarity=0.228 Sum_probs=114.0
Q ss_pred CCCceeecCCCeEEEEEEEeeCC--CCceEEEeCC--EE---ee-e-------------CCcceEEEeecCCcceEEEEE
Q psy7036 14 KPQLRQEDEGNRLIFECQLLCNP--KPDIVWFRGE--TQ---LS-E-------------DTRTVMKTTPIGTNKYLVALE 72 (254)
Q Consensus 14 ~~~~~~v~~g~~v~l~C~~~~~~--~~~v~W~~~~--~~---~~-~-------------~~~~~~~~~~~~~~~~~~~l~ 72 (254)
.|....+.+|++|+|.|.+.+.+ .+.+.|||++ .. +. . ..++.+... . .....+|.
T Consensus 6 qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~--~-~~~~~sL~ 82 (225)
T 1op3_H 6 ESGGGLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRD--D-LEDFVYLQ 82 (225)
T ss_dssp EECCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEE--T-TTTEEEEE
T ss_pred cCCCeEecCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEec--C-CCCEEEEE
Confidence 34567899999999999998765 6789999853 21 10 0 112222211 1 12345899
Q ss_pred EeccCCCCCeEEEEEEEcCCC-----c---eEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeC-CCC-
Q psy7036 73 LDDVIETDAGLYKVKAKNKMG-----E---VAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQAD-PAP- 142 (254)
Q Consensus 73 i~~~~~~d~G~Y~C~~~~~~~-----~---~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~- 142 (254)
|.+++.+|+|.|.|.+.+..+ . ......|.|... ...+|.+........+..|+.+.|.|.+.+. |.+
T Consensus 83 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~--~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~ 160 (225)
T 1op3_H 83 MHKMRVEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPA--STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV 160 (225)
T ss_dssp ECSCCGGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESC--SCBCCEEEEECCCTTCCCCCEEEEEEEEEEEBSSCC
T ss_pred ECCCChhhCEEEEEEEecCCCccccccceeecCCEEEecccC--CCcCCeEEEecccccccCCCcEEEEEEEEeEECCCe
Confidence 999999999999999998754 1 112456777531 1122333221111124579999999999886 666
Q ss_pred eEEEEECCEecccCCcceEEEcCCC-CceeeEEEEccCCCCCceeEEEEEEcCCCcce
Q psy7036 143 TVIWSHSGVQVKEDKRHKFSIDKDG-HSYFASLEIIDVTIEDAGKYKVTAKNELGESN 199 (254)
Q Consensus 143 ~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~ 199 (254)
.+.|++++..+........ ...++ +...+.|.|.....+| |.|+|.|.|..+...
T Consensus 161 ~v~W~~~~~~~~~~~~~~~-~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~ 216 (225)
T 1op3_H 161 TVSWNSGALTSGVHTFPAV-LQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK 216 (225)
T ss_dssp EEECCTTSCCTTCEECCCE-ECTTSCEEEEEEEEEEGGGTTC-CCCCEEEEEGGGTEE
T ss_pred EEEEecCCCcCCeEecCce-eCCCCCEEEEEEEEEechhcCC-CcEEEEEEcCCCCcc
Confidence 8999998865421111111 12222 2334679999888888 999999999765443
No 191
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.89 E-value=2.7e-21 Score=143.32 Aligned_cols=191 Identities=17% Similarity=0.247 Sum_probs=121.2
Q ss_pred eEeCCCceeecCCCeEEEEEEEeeCC--CCceEEEeCC--EE---ee--------------eCCcceEEEeecCCcceEE
Q psy7036 11 FTQKPQLRQEDEGNRLIFECQLLCNP--KPDIVWFRGE--TQ---LS--------------EDTRTVMKTTPIGTNKYLV 69 (254)
Q Consensus 11 ~~~~~~~~~v~~g~~v~l~C~~~~~~--~~~v~W~~~~--~~---~~--------------~~~~~~~~~~~~~~~~~~~ 69 (254)
+...|....+.+|++|+|.|.+.+.+ .+.+.|||++ .. +. ...++.+... ......
T Consensus 29 ~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~---~~~~~~ 105 (282)
T 1qok_A 29 KLQQSGAELVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTD---TSSNTA 105 (282)
T ss_dssp EEEECCCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEE---TTTTEE
T ss_pred EEECCCCEEEeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEe---cCCCeE
Confidence 35567788999999999999998764 5789999953 11 10 0122222211 111234
Q ss_pred EEEEeccCCCCCeEEEEEEEcCCC---ce--EEEEEEEEeccccC---------CCCCccccCCCeeeecCCCeEEEEEE
Q psy7036 70 ALELDDVIETDAGLYKVKAKNKMG---EV--AASINLNFSREQID---------GLAPTFLKKPSIRQEDDGKRLLFECR 135 (254)
Q Consensus 70 ~l~i~~~~~~d~G~Y~C~~~~~~~---~~--~~~~~l~v~~~~~~---------~~~~~~~~~~~~~~~~~g~~~~l~C~ 135 (254)
+|.|.+++.+|+|.|.|.+.+..| .. .....|.|...+.. ..++.+...+....+.+|+.++|.|.
T Consensus 106 sL~I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~ 185 (282)
T 1qok_A 106 YLQLSSLTSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGEKVTITCS 185 (282)
T ss_dssp EEEECSCCGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECSEEEECTTCCEEEEEE
T ss_pred EEEECcCChhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCCEEEEcCCCcEEEEEE
Confidence 899999999999999999998865 11 12346676542110 01233334455667889999999999
Q ss_pred EeeCCCCeEEEEE--CCEeccc----------CCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCc-ceEEE
Q psy7036 136 IQADPAPTVIWSH--SGVQVKE----------DKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGE-SNATI 202 (254)
Q Consensus 136 ~~~~~~~~~~W~~--~~~~~~~----------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~-~~~~~ 202 (254)
+.+.+ +.+.|+| ++..+.. ....++...... ....|.|.+++.+|+|.|+|.+.+.... .....
T Consensus 186 ~~~~~-~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt 262 (282)
T 1qok_A 186 ASSSV-SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSG--TSYSLTISRMEAEDAATYYCQQRSSYPLTFGAGT 262 (282)
T ss_dssp ESSCC-SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET--TEEEEEESSCCGGGCEEEEEEECSSSSCEECCCE
T ss_pred ecCCC-ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCC--CEEEEEEccCChhHCEEEEEEEeeCCCceEeCCE
Confidence 99888 8999999 4543310 001112111111 1237999999999999999999875432 23334
Q ss_pred EEEEe
Q psy7036 203 SLNFD 207 (254)
Q Consensus 203 ~~~v~ 207 (254)
.|.|.
T Consensus 263 ~l~V~ 267 (282)
T 1qok_A 263 KLELK 267 (282)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 45554
No 192
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.89 E-value=3.7e-22 Score=146.22 Aligned_cols=184 Identities=15% Similarity=0.191 Sum_probs=107.3
Q ss_pred CCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeC--C-E--EeeeCC--------------cceEEEeecCCcceE
Q psy7036 8 APSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRG--E-T--QLSEDT--------------RTVMKTTPIGTNKYL 68 (254)
Q Consensus 8 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~--~-~--~~~~~~--------------~~~~~~~~~~~~~~~ 68 (254)
.|.+.+.|..+.+.+|++|+|.|.+.+.+.+.+.|||. + . .+.... +...... .....
T Consensus 2 s~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~---~~~~~ 78 (259)
T 3omz_A 2 SSNLEGRTKSVIRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYG---STRKN 78 (259)
T ss_dssp ---------CEEEETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEEC---C--CC
T ss_pred ccccccCCceeEecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeec---CCCCe
Confidence 46778888889999999999999998888889999982 1 1 111000 1111111 11123
Q ss_pred EEEEEeccCCCCCeEEEEEEEcCCC---ceEEEEEEEEeccccCC-----------CCCccccCCCeeeecCCCeEEEEE
Q psy7036 69 VALELDDVIETDAGLYKVKAKNKMG---EVAASINLNFSREQIDG-----------LAPTFLKKPSIRQEDDGKRLLFEC 134 (254)
Q Consensus 69 ~~l~i~~~~~~d~G~Y~C~~~~~~~---~~~~~~~l~v~~~~~~~-----------~~~~~~~~~~~~~~~~g~~~~l~C 134 (254)
.+|.|.+++.+|+|.|.|.+.+..+ .......|.|....... .++.+...+....+.+|+.++|.|
T Consensus 79 ~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C 158 (259)
T 3omz_A 79 LRMILRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSSVSMPVRKAVTLNC 158 (259)
T ss_dssp CEEEESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCCCCEEEETTCCEEECC
T ss_pred EEEEECCCCcccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeCCEEEEcCCCCEEEEE
Confidence 3799999999999999999998765 23334566665421100 023445556667888999999999
Q ss_pred EEeeC-CCCeEEEEECCE--ecc---c-------CCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcC
Q psy7036 135 RIQAD-PAPTVIWSHSGV--QVK---E-------DKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNE 194 (254)
Q Consensus 135 ~~~~~-~~~~~~W~~~~~--~~~---~-------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~ 194 (254)
.+.+. +.+.+.|+|... .+. . ....++....+.......|.|.+++.+|+|.|.|.+.+.
T Consensus 159 ~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 231 (259)
T 3omz_A 159 LYETSWWSYYIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISALQLEDSAKYFCALGES 231 (259)
T ss_dssp EEECCCSSCEEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESSCCGGGCSEEEEEEESC
T ss_pred ECCCccCCceEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCCChhHCEEEEEEEeCc
Confidence 98774 778999998531 110 0 001122222111111236999999999999999999853
No 193
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.89 E-value=5e-21 Score=153.16 Aligned_cols=186 Identities=16% Similarity=0.196 Sum_probs=111.2
Q ss_pred eCCCceeecCCCeEEEEEEEeeCCC----CceEEEeC--CEE---e-ee----------CCcceEEEeecCCcceEEEEE
Q psy7036 13 QKPQLRQEDEGNRLIFECQLLCNPK----PDIVWFRG--ETQ---L-SE----------DTRTVMKTTPIGTNKYLVALE 72 (254)
Q Consensus 13 ~~~~~~~v~~g~~v~l~C~~~~~~~----~~v~W~~~--~~~---~-~~----------~~~~~~~~~~~~~~~~~~~l~ 72 (254)
..|..+.+.+|++++|.|.+.+.+. ..+.|||. +.. + .. ....++....+ .....++|.
T Consensus 5 ~qp~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~sL~ 83 (512)
T 1zvo_C 5 QESGPGLVKPSETLSLTCIVSGGPIRRTGYYWGWIRQPPGKGLEWIGGVYYTGSIYYNPSLRGRVTISVD-TSRNQFSLN 83 (512)
T ss_pred ECCCCEEEcCCCCEEEEEEEcccccCCCCeeEEEEEeCCCCCcEEEEEEecCCCEEECCccCCceEEEec-CCCCEEEEE
Confidence 3467788999999999999976432 67999985 221 1 10 00112222111 122345899
Q ss_pred EeccCCCCCeEEEEEEEcCCC-----------c--eEEEEEEEEeccccCCCCCcccc-CCCeeeecCCCeEEEEEEEee
Q psy7036 73 LDDVIETDAGLYKVKAKNKMG-----------E--VAASINLNFSREQIDGLAPTFLK-KPSIRQEDDGKRLLFECRIQA 138 (254)
Q Consensus 73 i~~~~~~d~G~Y~C~~~~~~~-----------~--~~~~~~l~v~~~~~~~~~~~~~~-~~~~~~~~~g~~~~l~C~~~~ 138 (254)
|.+++.+|+|.|.|.+.+..+ . ......|.|.... ..+|.+.. .+.......++.+.|.|.+.+
T Consensus 84 I~~v~~~Dsg~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~~~~--~~~P~i~~~~~~~~~~~~~~~v~L~C~~~g 161 (512)
T 1zvo_C 84 LRSMSAADTAMYYCARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAP--TKAPDVFPIISGCRHPKDNSPVVLACLITG 161 (512)
T ss_pred ECcCCHHHCEEEEEEEECCCCccccccccccccccccCceEEEecccC--CcCCeEEeccCCcccccCCCeEEEEEEEEe
Confidence 999999999999999987642 1 1234566665211 12333221 111110124688999999988
Q ss_pred C-CCC-eEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEE
Q psy7036 139 D-PAP-TVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATI 202 (254)
Q Consensus 139 ~-~~~-~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~ 202 (254)
. |.+ .+.|++++...............+.+...+.|.|.....+ .|.|+|.|.|..+......
T Consensus 162 ~~P~p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~-~g~ytC~v~n~~~~~~~~~ 226 (512)
T 1zvo_C 162 YHPTSVTVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWR-QGEYKCVVQHTASKSKKEI 226 (512)
T ss_pred eecCceEEEEEcCcccCceEecCceecCCCCEEEEEEEEEcHHHcC-CceEEEEEEeCCCCceEEE
Confidence 7 655 8999996543211100011111122234467888887777 8999999999988765443
No 194
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.89 E-value=2.3e-21 Score=141.04 Aligned_cols=180 Identities=15% Similarity=0.218 Sum_probs=114.2
Q ss_pred eeEeCCCceeecCCCeEEEEEEEeeCC-----CCceEEEeCC--E---Eeee---------CCcceEEEeecCCcceEEE
Q psy7036 10 SFTQKPQLRQEDEGNRLIFECQLLCNP-----KPDIVWFRGE--T---QLSE---------DTRTVMKTTPIGTNKYLVA 70 (254)
Q Consensus 10 ~~~~~~~~~~v~~g~~v~l~C~~~~~~-----~~~v~W~~~~--~---~~~~---------~~~~~~~~~~~~~~~~~~~ 70 (254)
.+.+.|..+.+.+|++++|.|.+.+.+ .+.+.|+|++ . .+.. ..++.+. . ......
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~--~---~~~~~~ 77 (247)
T 1svz_A 3 LMTQTPLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGS--G---SGTDFT 77 (247)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEE--E---ETTEEE
T ss_pred cEEecCCeEEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEec--c---CCCEEE
Confidence 567778888999999999999998776 6889999842 1 1111 1222221 1 112347
Q ss_pred EEEeccCCCCCeEEEEEEEcCCCc-eEEEEEEEEeccccC-------CCCCccccCCCeeeecCCCeEEEEEEEeeCC--
Q psy7036 71 LELDDVIETDAGLYKVKAKNKMGE-VAASINLNFSREQID-------GLAPTFLKKPSIRQEDDGKRLLFECRIQADP-- 140 (254)
Q Consensus 71 l~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~~l~v~~~~~~-------~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~-- 140 (254)
|.|.+++.+|+|.|.|.+.+..+. ......|.|...... ..++.....+....+.+|+.++|.|.+.+.+
T Consensus 78 L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~ 157 (247)
T 1svz_A 78 LKISRVEAEDLGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQSGPELKKPGETVKISCKATNYAFT 157 (247)
T ss_dssp EEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEECCCEEECTTCCEEEEEEEESSCGG
T ss_pred EEECCCCHHHCEEEEEEEccCCccEECCCEEEEEECCccccccccccccCceEEeCCCceeecCCCcEEEEEEEcCcccC
Confidence 999999999999999999987543 223456666532100 0012122222334588999999999998875
Q ss_pred CCeEEEEECC--Eec------ccC---------CcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcC
Q psy7036 141 APTVIWSHSG--VQV------KED---------KRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNE 194 (254)
Q Consensus 141 ~~~~~W~~~~--~~~------~~~---------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~ 194 (254)
.+.+.|+|+. ... ... ...++....+.......|.|.+++.+|+|.|.|.+.|.
T Consensus 158 ~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 158 DYSMHWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNEDTATYFCVRDRH 228 (247)
T ss_dssp GSCEEEEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEG
T ss_pred CcEEEEEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCChhHCEEEEEEEecc
Confidence 5689999963 111 000 01112211111111248999999999999999999985
No 195
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.89 E-value=3.6e-22 Score=143.49 Aligned_cols=185 Identities=12% Similarity=0.217 Sum_probs=115.4
Q ss_pred CCceeecCCCeEEEEEEEeeCCC----CceEEEeCC--EE---e-ee----------CCcceEEEeecCCcceEEEEEEe
Q psy7036 15 PQLRQEDEGNRLIFECQLLCNPK----PDIVWFRGE--TQ---L-SE----------DTRTVMKTTPIGTNKYLVALELD 74 (254)
Q Consensus 15 ~~~~~v~~g~~v~l~C~~~~~~~----~~v~W~~~~--~~---~-~~----------~~~~~~~~~~~~~~~~~~~l~i~ 74 (254)
|....+.+|++|+|.|.+.+.+. +.+.|||++ .. + .. ....++....+. ......|.|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~-~~~~~~L~I~ 85 (228)
T 3bae_H 7 SGPGLLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDT-SRDMVFMKIT 85 (228)
T ss_dssp ECCSEECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEET-TTTEEEEEEC
T ss_pred CCceeecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcC-CCCeEEEEEc
Confidence 56678999999999999987664 789999842 21 1 10 011122221111 1123589999
Q ss_pred ccCCCCCeEEEEEEEcCCC------c---eEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeC-CCC-e
Q psy7036 75 DVIETDAGLYKVKAKNKMG------E---VAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQAD-PAP-T 143 (254)
Q Consensus 75 ~~~~~d~G~Y~C~~~~~~~------~---~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~-~ 143 (254)
+++.+|+|.|.|.+.+..+ . ......|.|... ...+|.+........+..|+.+.|.|.+.+. |.+ .
T Consensus 86 ~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~--~~~~P~i~~~~~~~~~~~g~~~~l~C~~~g~~P~p~~ 163 (228)
T 3bae_H 86 SVDTADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSA--KTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVT 163 (228)
T ss_dssp SCCGGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSC--CCBCCEEEEECC-----CCSEEEEEEEEEEEBSSCCE
T ss_pred CCCcccCEEEEEEEecCCCccccccceeeeCCcEEEEecCC--CCCCCEEEEecccccccCCCCEEEEEEEccEeCCCEE
Confidence 9999999999999998654 1 112356676531 1123433322222235679999999999886 777 8
Q ss_pred EEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEE
Q psy7036 144 VIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISL 204 (254)
Q Consensus 144 ~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~ 204 (254)
+.|++++..+........ ...+.+...+.|.|.....+| |.|+|.|.|..+.......+
T Consensus 164 v~W~~~~~~~~~~~~~~~-~~~~~~~~~s~L~i~~~~~d~-g~YtC~~~n~~~~~~~~~~~ 222 (228)
T 3bae_H 164 LTWNSGSLSSGVHTFPAV-LQSDLYTLSSSVTVTSSTWPS-ESITCNVAHPASSTKVDKKI 222 (228)
T ss_dssp EEEGGGTCCTTEEEEEEE-EETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEEEC
T ss_pred EEEeeCCcccCceEcCce-eCCCcEEEEEEEEEEhhhcCC-CcEEEEEEECCCCCCEEEEc
Confidence 999998875421111111 111222234579999888866 99999999998876655443
No 196
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.89 E-value=3.2e-21 Score=139.77 Aligned_cols=195 Identities=14% Similarity=0.207 Sum_probs=121.3
Q ss_pred CeeEeCCCceeecCCCeEEEEEEEeeC--CCCceEEEeCC--E---Eee-eC-----------CcceEEEeecCCcceEE
Q psy7036 9 PSFTQKPQLRQEDEGNRLIFECQLLCN--PKPDIVWFRGE--T---QLS-ED-----------TRTVMKTTPIGTNKYLV 69 (254)
Q Consensus 9 p~~~~~~~~~~v~~g~~v~l~C~~~~~--~~~~v~W~~~~--~---~~~-~~-----------~~~~~~~~~~~~~~~~~ 69 (254)
+.+.+.|..+.+.+|++++|.|.+.+. +...+.|||.. . .+. .. ...++....+ .....+
T Consensus 2 ~~v~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~ 80 (242)
T 1hxm_B 2 GHLEQPQISSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRI-PETSTS 80 (242)
T ss_dssp CEEECCCSEEEEETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEE-TTTTEE
T ss_pred CccCcCCceEEecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEec-CCCcEE
Confidence 456778888899999999999999875 56789999842 1 111 00 1122222111 111345
Q ss_pred EEEEeccCCCCCeEEEEEEEcCCC-----c--eEEEEEEEEeccccC-CCCCccc-cCCCeeeecCCCeEEEEEEEeeC-
Q psy7036 70 ALELDDVIETDAGLYKVKAKNKMG-----E--VAASINLNFSREQID-GLAPTFL-KKPSIRQEDDGKRLLFECRIQAD- 139 (254)
Q Consensus 70 ~l~i~~~~~~d~G~Y~C~~~~~~~-----~--~~~~~~l~v~~~~~~-~~~~~~~-~~~~~~~~~~g~~~~l~C~~~~~- 139 (254)
+|.|.+++.+|+|.|.|.+.+... . ......|.|...... ..+|... ..+....+..|+.+.|.|.+.+.
T Consensus 81 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~p~~~v~~p~~~~~~~g~~v~L~C~~~g~~ 160 (242)
T 1hxm_B 81 TLTIHNVEKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFF 160 (242)
T ss_dssp EEEECSCCGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSCCSCBCCCCCCCGGGGGSSSCEEEEEEEEEES
T ss_pred EEEECCCCcccCEEEEEeeecCCccccccceeEcCcEEEEEcccccCCCcCCCceEECCChhhcccCCCceEEEEEeeEE
Confidence 899999999999999999987531 1 112456777532110 0122211 11233345579999999999886
Q ss_pred CC-CeEEEEECCE-ecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEE
Q psy7036 140 PA-PTVIWSHSGV-QVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNF 206 (254)
Q Consensus 140 ~~-~~~~W~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v 206 (254)
|. +.+.|++++. .+............+.+...+.|.|..... + |.|+|.|.|..+.......+.+
T Consensus 161 P~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-g~y~C~v~n~~~~~~~~~~~~~ 227 (242)
T 1hxm_B 161 PDVIKIHWEEKKSNTILGSQEGNTMKTNDTYMKFSWLTVPEKSL-D-KEHRCIVRHENNKNGVDQEIIF 227 (242)
T ss_dssp SCCEEEEEEESSSCCCCCCEECCCEECSSSEEEEEEEEECTGGG-G-SCEEEEEEETTSGGGSCEEEEE
T ss_pred CCCeEEEEEcCCCEeecCccccceecCCCcEEEEEEEEEccccC-C-CEEEEEEEeCCCCCCceeEeec
Confidence 54 6899999987 453221111112222223345788877664 4 9999999999887755555554
No 197
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.88 E-value=5.6e-24 Score=153.50 Aligned_cols=182 Identities=15% Similarity=0.215 Sum_probs=99.5
Q ss_pred CCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCC--EEe---ee---------CCcceEEEeecCCcceEEEEEE
Q psy7036 8 APSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGE--TQL---SE---------DTRTVMKTTPIGTNKYLVALEL 73 (254)
Q Consensus 8 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~--~~~---~~---------~~~~~~~~~~~~~~~~~~~l~i 73 (254)
.+.+.+.|....+.+|++++|.|.+.+.+.+.+.|||++ ..+ .. ..++... ......+|.|
T Consensus 23 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~-----~~~~~~~L~I 97 (233)
T 3bqu_C 23 ETTVTQSPASLSMSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSS-----GYGTDFVFTI 97 (233)
T ss_dssp CCCEEEECSBC-------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCC-----EEEEEEEEC-
T ss_pred ceeEEEcCCeEEEecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEee-----ccCCEEEEEE
Confidence 455667788888999999999999988777789999853 111 10 1111111 0123347999
Q ss_pred eccCCCCCeEEEEEEEcCCCce-EEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCC-CC-eEEEEECC
Q psy7036 74 DDVIETDAGLYKVKAKNKMGEV-AASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADP-AP-TVIWSHSG 150 (254)
Q Consensus 74 ~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~-~~-~~~W~~~~ 150 (254)
.+++.+|+|.|.|.+.+..+.. .....|.|... ..+|.+...+.......|+.++|.|.+.+.+ .+ .+.|+|++
T Consensus 98 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~---~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g 174 (233)
T 3bqu_C 98 ENMLSEDVADYYCLQSDNLPYTFGGGTNLEIKRA---DAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDG 174 (233)
T ss_dssp ----CCCCSEEEEEECSSSSCCBCCCCBC---CC---CBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEEC-
T ss_pred CCCCHHHCEEEEEEEecCCceeecCCEEEEEeCC---CCCCEEEEeCCCHHhhcCCceEEEEEEccccCCceEEEEEECC
Confidence 9999999999999998866532 12234455321 1244433322222233588999999998854 43 79999999
Q ss_pred EecccC-Cc-ceEEEcCCC-CceeeEEEEccCCCCCceeEEEEEEcCCCc
Q psy7036 151 VQVKED-KR-HKFSIDKDG-HSYFASLEIIDVTIEDAGKYKVTAKNELGE 197 (254)
Q Consensus 151 ~~~~~~-~~-~~~~~~~~~-~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~ 197 (254)
..+... .. .......++ +...+.|.|.....+|.|.|+|.|.|....
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 224 (233)
T 3bqu_C 175 SERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 224 (233)
T ss_dssp ----CCEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC---
T ss_pred eeCCCCceEecCCccCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCCC
Confidence 876543 11 011111222 233467999999899999999999997554
No 198
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.88 E-value=7.2e-21 Score=132.88 Aligned_cols=171 Identities=12% Similarity=0.101 Sum_probs=116.2
Q ss_pred CeeEeCCCc-eeecCCCeEEEEEEEeeCCCC--ceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEE
Q psy7036 9 PSFTQKPQL-RQEDEGNRLIFECQLLCNPKP--DIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYK 85 (254)
Q Consensus 9 p~~~~~~~~-~~v~~g~~v~l~C~~~~~~~~--~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 85 (254)
|.....+.. +.+.+|++++|.|.+ +.|.+ .|+|++.+..+ .+ .... .....|.|.+++.+|+|.|.
T Consensus 7 ~~~V~pp~~~v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l---~~--~~~~-----~~~~~L~I~~v~~~d~G~Y~ 75 (210)
T 1gsm_A 7 PLQVEPPEPVVAVALGASRQLTCRL-ACADRGASVQWRGLDTSL---GA--VQSD-----TGRSVLTVRNASLSAAGTRV 75 (210)
T ss_dssp SEEEESCCSEEEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTT---CC--EEEE-----SSEEEEEECSCCGGGCEEEE
T ss_pred CEEEeCCCCceEEeCCCCEEEEEEC-CCCCCCcceEEeeccccc---Cc--EEec-----CCccEEEECccCcccCceEE
Confidence 433344444 588999999999999 77777 99999855333 11 1111 11237999999999999999
Q ss_pred EEEEcCCCceEEEEEEEEeccccCCCCCcccc-CCCeeeecCCCeEEEEEEEeeC-CC----CeEEEEECCEecccCCcc
Q psy7036 86 VKAKNKMGEVAASINLNFSREQIDGLAPTFLK-KPSIRQEDDGKRLLFECRIQAD-PA----PTVIWSHSGVQVKEDKRH 159 (254)
Q Consensus 86 C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~-~~~~~~~~~g~~~~l~C~~~~~-~~----~~~~W~~~~~~~~~~~~~ 159 (254)
|.+.+..+.....+.|.|.. +|.... .+. .+..|+.. |.|.+.+. |. +++.|+|++..+......
T Consensus 76 C~a~n~~~~~~~~~~ltV~~------~P~~~~i~~~--~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk~~~~L~~~~~~ 146 (210)
T 1gsm_A 76 CVGSCGGRTFQHTVQLLVYA------FPNQLTVSPA--ALVPGDPE-VACTAHKVTPVDPNALSFSLLVGGQELEGAQAL 146 (210)
T ss_dssp EEEEETTEEEEEEEEEEEEB------CCSEEEEESS--SBCTTCCE-EEEEEEEEBCCCTTTEEEEEEETTEECTTCEEC
T ss_pred EEEEeCCCceEEEEEEEEEe------cCCCcEEccc--eEEeCCce-EEEEeCCCCCCCCCCcEEEEEECCEEccccccc
Confidence 99999888877788888873 443222 222 45567778 99999885 64 379999999998543211
Q ss_pred e--EEE--------cCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcce
Q psy7036 160 K--FSI--------DKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESN 199 (254)
Q Consensus 160 ~--~~~--------~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~ 199 (254)
. ... ....+...+++.+...+.+|.+.|+|.|.+..-...
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~vts~~~~~~~~~D~~~~~tC~a~~~L~~~~ 196 (210)
T 1gsm_A 147 GPEVQEEEEEPQGDEDVLFRVTERWRLPPLGTPVPPALYCQATMRLPGLE 196 (210)
T ss_dssp CCEEEECTTCCSSCCCCCEEEEEEEECCCCCSSCCSEEEEEEEEEETTEE
T ss_pred ccceecccccccCCcceEEEEEEEEeecCCcccCCceEEEEEEeeCCCCc
Confidence 1 100 011223345677777777777899999998765443
No 199
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.88 E-value=3.6e-21 Score=138.56 Aligned_cols=189 Identities=13% Similarity=0.174 Sum_probs=114.5
Q ss_pred CCCceeecCCCeEEEEEEEeeCC--CCceEEEeCC--E---Eee-e------------CCcceEEEeecCCcceEEEEEE
Q psy7036 14 KPQLRQEDEGNRLIFECQLLCNP--KPDIVWFRGE--T---QLS-E------------DTRTVMKTTPIGTNKYLVALEL 73 (254)
Q Consensus 14 ~~~~~~v~~g~~v~l~C~~~~~~--~~~v~W~~~~--~---~~~-~------------~~~~~~~~~~~~~~~~~~~l~i 73 (254)
.|....+.+|++++|.|.+.+.+ .+.+.|||.. . .+. . ..++.+... . ......|.|
T Consensus 6 qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~--~-~~~~~~L~I 82 (232)
T 1dn0_B 6 QWGAGLLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVD--T-SKNQFSLKL 82 (232)
T ss_dssp EECCCEECTTSCEEEEEEEESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEE--T-TTTEEEEEE
T ss_pred CCCCEEEeCCCcEEEEEEEccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEe--C-CCCEEEEEE
Confidence 34567899999999999998754 5789999842 1 111 0 122222211 1 123458999
Q ss_pred eccCCCCCeEEEEEEEcCC--Cc----eEEEEEEEEeccccCCCCCccccCCCeeeecCC-CeEEEEEEEeeC-CCC-eE
Q psy7036 74 DDVIETDAGLYKVKAKNKM--GE----VAASINLNFSREQIDGLAPTFLKKPSIRQEDDG-KRLLFECRIQAD-PAP-TV 144 (254)
Q Consensus 74 ~~~~~~d~G~Y~C~~~~~~--~~----~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g-~~~~l~C~~~~~-~~~-~~ 144 (254)
.+++.+|+|.|.|.+.+.. +. ......|.|... ...+|.+........+..| +.++|.|.+.+. |.+ .+
T Consensus 83 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~--~~~~P~v~~~~p~~~~~~g~~~v~L~C~~~g~~P~p~~v 160 (232)
T 1dn0_B 83 SSVTAADTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSG--SASAPTLFPLVSCENSPSDTSSVAVGCLAQDFLPDSITF 160 (232)
T ss_dssp CSCCGGGCEEEEEEECSSTTSCSCCSEECCCEEEEECSS--CCBCCEEEEEECC------CCSEEEEEEEEEEBSSCCEE
T ss_pred CCCCcccCEEEEEEEecCCcCCchhhhcccceEEEEccC--CCCCCceEEeccccccCCCCCcEEEEEEEEEEeCCCeEE
Confidence 9999999999999998422 11 123456777531 1123333221111223467 899999999886 766 89
Q ss_pred EEEE-CCEecccCCcceEEEcCCCCceeeEEEEccCCC--CCceeEEEEEEcCCCcceEEEEEEEe
Q psy7036 145 IWSH-SGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTI--EDAGKYKVTAKNELGESNATISLNFD 207 (254)
Q Consensus 145 ~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~--~d~G~y~C~~~~~~~~~~~~~~~~v~ 207 (254)
.|++ ++..+..............+...+.|.|..... +|.|.|+|.|.|..+.......+.+.
T Consensus 161 ~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~ytC~v~n~~~~~~~~~~i~~~ 226 (232)
T 1dn0_B 161 SWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVMAGTDEHVVCKVQHPNGNKEKNVPLPVI 226 (232)
T ss_dssp EEEETTSCEECCEEECCCEEETTEEEEEEEEEECTTCC---CCCEEEEEEECTTCCEEEEEECCC-
T ss_pred EEEcCCCCceeeEEECCccccCCcEEEEEEEEEcHHHhcccCCCeEEEEEEeCCCCcceeEecCCC
Confidence 9999 887765310000001112222346789988886 78999999999998877666655544
No 200
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.88 E-value=9.3e-22 Score=143.54 Aligned_cols=187 Identities=11% Similarity=0.140 Sum_probs=117.2
Q ss_pred CCCceeecCCCeEEEEEEEeeC--CCCceEEEeCC-----EEe-e-------------eCCcceEEEeecCCcceEEEEE
Q psy7036 14 KPQLRQEDEGNRLIFECQLLCN--PKPDIVWFRGE-----TQL-S-------------EDTRTVMKTTPIGTNKYLVALE 72 (254)
Q Consensus 14 ~~~~~~v~~g~~v~l~C~~~~~--~~~~v~W~~~~-----~~~-~-------------~~~~~~~~~~~~~~~~~~~~l~ 72 (254)
.+..+.+.+|++|+|.|.+.+. +...+.|||.. ..+ . ...++.+.... .....+|.
T Consensus 6 ~p~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~---~~~~~sL~ 82 (253)
T 3liz_H 6 ESGGGLVQPGGSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDN---AKNTLFLQ 82 (253)
T ss_dssp EECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEG---GGTEEEEE
T ss_pred cCCCEEECCCCcEEEEEEeeCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeC---CCCEEEEE
Confidence 4556789999999999999763 35689999842 111 0 01223222211 12345799
Q ss_pred EeccCCCCCeEEEEEEEcCC----CceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEee-CCCC-eEEE
Q psy7036 73 LDDVIETDAGLYKVKAKNKM----GEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQA-DPAP-TVIW 146 (254)
Q Consensus 73 i~~~~~~d~G~Y~C~~~~~~----~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~-~~~W 146 (254)
|.+++.+|+|.|.|.+.+.. ........|.|.. ....+|.+........+..|+.+.|.|.+.+ .|.+ .+.|
T Consensus 83 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~--~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W 160 (253)
T 3liz_H 83 MSSLKSEDTAMYYCTRDPAGRAWFAYWGQGTLVTVSA--AKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTW 160 (253)
T ss_dssp ECSCCGGGCEEEEEEECCBTTTBCCEECCCEEEEECS--SCCBCCEEEEECC------CCEEEEEEEEEEEBSSCCEEEE
T ss_pred ECCCChhhCEEEEEEEecCCcceeeEECCCEEEEEec--cCCCCCeEEEecCCcccCCCCcEEEEEEEeeEeCCCeEEEE
Confidence 99999999999999998752 2222334666642 1113444332223334557999999999988 6656 8999
Q ss_pred EECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEe
Q psy7036 147 SHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFD 207 (254)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~ 207 (254)
++++..+........ .....+...+.|.|.....+| |.|+|.|.|..+.......+.+.
T Consensus 161 ~~~~~~~~~~~~~~~-~~~g~~~~~s~L~i~~~~~~d-g~ytC~v~~~~~~~~~~~~~~~~ 219 (253)
T 3liz_H 161 NSGSLSSGVHTFPAV-LQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIVPR 219 (253)
T ss_dssp GGGTBCTTEEECCCE-EETTEEEEEEEEEEETTSTTT-SCCEEEEEEGGGTEEEEEECCCC
T ss_pred EeCCeecceEeCCcc-ccCCeEEEEEEEEEcHHHCCC-ceEEEEEEECCCCcceEEEecCc
Confidence 999874421111111 112222334689999999999 99999999998877766666554
No 201
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.88 E-value=1e-21 Score=143.66 Aligned_cols=178 Identities=14% Similarity=0.215 Sum_probs=111.2
Q ss_pred eCCCceeecCCCeEEEEEEEeeC--CCCceEEEeCC--E---Eee---------eCCcceEEEeecCCcceEEEEEEecc
Q psy7036 13 QKPQLRQEDEGNRLIFECQLLCN--PKPDIVWFRGE--T---QLS---------EDTRTVMKTTPIGTNKYLVALELDDV 76 (254)
Q Consensus 13 ~~~~~~~v~~g~~v~l~C~~~~~--~~~~v~W~~~~--~---~~~---------~~~~~~~~~~~~~~~~~~~~l~i~~~ 76 (254)
..|....+.+|++|+|.|.+.+. +.+.+.|||++ . .+. ...++.. ... .....|.|.++
T Consensus 7 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~--~~~---~~~~~L~I~~v 81 (256)
T 3ux9_B 7 TQPPSVSGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSG--SKS---GTSASLAITGL 81 (256)
T ss_dssp BCCSEEEECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEE--EEE---TTEEEEEECSC
T ss_pred ecCCcEEEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEE--Ecc---CCEEEEEECCC
Confidence 34556789999999999999876 77899999842 1 111 1122222 111 12347999999
Q ss_pred CCCCCeEEEEEEEcCCCc---eEEEEEEEEeccccCCC--------------CCccccCCCeeeecCCCeEEEEEEEeeC
Q psy7036 77 IETDAGLYKVKAKNKMGE---VAASINLNFSREQIDGL--------------APTFLKKPSIRQEDDGKRLLFECRIQAD 139 (254)
Q Consensus 77 ~~~d~G~Y~C~~~~~~~~---~~~~~~l~v~~~~~~~~--------------~~~~~~~~~~~~~~~g~~~~l~C~~~~~ 139 (254)
+.+|+|.|+|.+.+..+. ......|.|........ .+.....+....+.+|+.++|.|.+.+.
T Consensus 82 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~ 161 (256)
T 3ux9_B 82 QSEDEADYYCQVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVESGGGLVQPGGSLRLSCAASGF 161 (256)
T ss_dssp CGGGCEEEEEEEEETTTTEEEECCCEEEEEC----------------------CCEEEEECCEEECTTCCEEEEEEEESS
T ss_pred ChhhCEEEEEEEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEcCCCeEEcCCCeEEEEEEEeCC
Confidence 999999999999986542 22345666653211000 0111122233457889999999999887
Q ss_pred C--CCeEEEEEC--CEec------ccC---------CcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCC
Q psy7036 140 P--APTVIWSHS--GVQV------KED---------KRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNEL 195 (254)
Q Consensus 140 ~--~~~~~W~~~--~~~~------~~~---------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~ 195 (254)
+ .+.+.|+|+ +..+ ... ...++....++......|.|.+++.+|+|.|+|.+.|..
T Consensus 162 ~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 236 (256)
T 3ux9_B 162 TFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARYIDF 236 (256)
T ss_dssp CGGGSEEEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred cccccEEEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCChhhCEEEEEEEEcCC
Confidence 6 678999986 2211 000 001222222211223469999999999999999999864
No 202
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.88 E-value=1.2e-21 Score=142.26 Aligned_cols=187 Identities=11% Similarity=0.159 Sum_probs=119.9
Q ss_pred CCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEe--------------CCEEeeeC----CcceEEEeecCCcceEE
Q psy7036 8 APSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFR--------------GETQLSED----TRTVMKTTPIGTNKYLV 69 (254)
Q Consensus 8 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~--------------~~~~~~~~----~~~~~~~~~~~~~~~~~ 69 (254)
.+.+++.|..+.+.+|++++|.| ..+.+.+.+.||| ++...... .++.+ ... ....+
T Consensus 2 ~~~v~~~p~~v~v~~G~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~--~~~--~~~~~ 76 (245)
T 4ei6_B 2 GPKVLQIPSHQIIDMGQMVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSV--ERP--DGSYF 76 (245)
T ss_dssp CCCCEEECSEEEEETTCCEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEE--ECC--TTSCE
T ss_pred CcceEeCCceEEecCCCCEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEE--Eec--cCceE
Confidence 35677888889999999999999 6567888999998 22222211 22222 221 12345
Q ss_pred EEEEeccCCCCCeEEEEEEEcCC----CceEEEEEEEEeccccCCCCCccc-cCCCeeeecCCCeEEEEEEEeeC-CCC-
Q psy7036 70 ALELDDVIETDAGLYKVKAKNKM----GEVAASINLNFSREQIDGLAPTFL-KKPSIRQEDDGKRLLFECRIQAD-PAP- 142 (254)
Q Consensus 70 ~l~i~~~~~~d~G~Y~C~~~~~~----~~~~~~~~l~v~~~~~~~~~~~~~-~~~~~~~~~~g~~~~l~C~~~~~-~~~- 142 (254)
+|.|.+++.+|+|.|.|.+.+.. ........|.|........+|.+. ..+....+..|+.+.|.|.+.+. |.+
T Consensus 77 sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~ 156 (245)
T 4ei6_B 77 TLKIQPTALEDSAVYFCASSFWGAYAEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHV 156 (245)
T ss_dssp EEEECSCCGGGCEEEEEEEECSSTTCCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCE
T ss_pred EEEECCCCHhHCEEEEEEEccCCCcceEEEcCCcEEEEecccCCCCCceEEEeCCCcccccCCCceEEEEEEeeEeCCCe
Confidence 89999999999999999998532 222334556665311111233322 22333334568999999999884 444
Q ss_pred eEEEEECCEecccCCcceEEE-------cCCCCceeeEEEEccCCCCC-ceeEEEEEEcCCCcce
Q psy7036 143 TVIWSHSGVQVKEDKRHKFSI-------DKDGHSYFASLEIIDVTIED-AGKYKVTAKNELGESN 199 (254)
Q Consensus 143 ~~~W~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~i~~~~~~d-~G~y~C~~~~~~~~~~ 199 (254)
.+.|+++|..+.......... ....+...+.|.|.....+| .|.|+|.|.|......
T Consensus 157 ~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~ytC~v~~~~l~~~ 221 (245)
T 4ei6_B 157 ELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 221 (245)
T ss_dssp EEEEEETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBCTT
T ss_pred EEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEECCCCCc
Confidence 799999998876432211000 11222334568888888778 8999999999765444
No 203
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.88 E-value=2e-21 Score=142.12 Aligned_cols=185 Identities=12% Similarity=0.205 Sum_probs=116.4
Q ss_pred EeCCCceeecCCCeEEEEEEEeeCC--CCceEEEeCC--EE---ee-e-------------CCcceEEEeecCCcceEEE
Q psy7036 12 TQKPQLRQEDEGNRLIFECQLLCNP--KPDIVWFRGE--TQ---LS-E-------------DTRTVMKTTPIGTNKYLVA 70 (254)
Q Consensus 12 ~~~~~~~~v~~g~~v~l~C~~~~~~--~~~v~W~~~~--~~---~~-~-------------~~~~~~~~~~~~~~~~~~~ 70 (254)
...|....+.+|++|+|.|.+.+.+ .+.+.|||+. .. +. . ..++.+... . ......
T Consensus 10 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~--~-~~~~~s 86 (261)
T 2xqy_G 10 LQQPGAELVKPGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVD--K-SSSTVY 86 (261)
T ss_dssp EECCSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEE--G-GGTEEE
T ss_pred EECCCCEEEcCCCCEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEec--C-CCCEEE
Confidence 3456788899999999999998765 6789999863 21 11 0 112222211 1 123458
Q ss_pred EEEeccCCCCCeEEEEEEEcCCCc---eEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeC-CCC-eEE
Q psy7036 71 LELDDVIETDAGLYKVKAKNKMGE---VAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQAD-PAP-TVI 145 (254)
Q Consensus 71 l~i~~~~~~d~G~Y~C~~~~~~~~---~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~-~~~ 145 (254)
|.|.+++.+|+|.|.|.+.+..+. ......|.|... ...+|.+........+..|+.++|.|.+.+. |.+ .+.
T Consensus 87 L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~--~~~~P~v~~~~p~~~v~~g~~v~L~C~~~g~~P~~i~v~ 164 (261)
T 2xqy_G 87 IQLSSLTSEDSAVYYCGRLGYVYGFDYWGQGTTLTVSSA--KTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLT 164 (261)
T ss_dssp EEECSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSS--CCBCCEEEEECCCCC--CCSEEEEEEEEEEEBSSCCEEE
T ss_pred EEEcCCCcccCeEEEEEEecCCCcceEECCCEEEEEccC--CCCCCeEEEeCCCccccCCCcEEEEEEEEeEeCCCCEEE
Confidence 999999999999999999986431 112356676531 1123333322212235679999999999875 666 899
Q ss_pred EEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEE
Q psy7036 146 WSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATIS 203 (254)
Q Consensus 146 W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~ 203 (254)
|++++..+......... ....+...+.|.|.....+| |.|+|.|.|..........
T Consensus 165 W~k~g~~~~~~~~~~~~-~~g~~~~~s~L~i~~~~~~~-g~YtC~v~n~~~~~~~~~~ 220 (261)
T 2xqy_G 165 WNSGSLSSGVHTFPAVL-QSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKK 220 (261)
T ss_dssp EGGGTCCTTEEECCCEE-ETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEEE
T ss_pred EecCCCcCceEecCcee-cCCcEEEEEEEEEeccccCC-CEEEEEEEECCCCccEEEE
Confidence 99998765321111111 12222234689999888878 9999999997655444433
No 204
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.88 E-value=3.5e-21 Score=139.43 Aligned_cols=186 Identities=12% Similarity=0.241 Sum_probs=119.3
Q ss_pred CeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeC--------------CEEeee---CCcceEEEeecCCcceEEEE
Q psy7036 9 PSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRG--------------ETQLSE---DTRTVMKTTPIGTNKYLVAL 71 (254)
Q Consensus 9 p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~--------------~~~~~~---~~~~~~~~~~~~~~~~~~~l 71 (254)
+.+++.|..+.+.+|++|+|.|.+.+ +.+.+.|||. +..... ..++.+.. . ....++|
T Consensus 3 ~~v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~--~~~~~sL 77 (240)
T 3q5y_A 3 SGVVQSPRHIIKEKGGRSVLTCIPIS-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQ--F--DDYHSEM 77 (240)
T ss_dssp CCCEEECSEEEEETTCCEEEEEECCT-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEE--C--TTSCEEE
T ss_pred cccccCcceeeecCCCcEEEEEEeCC-CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEe--C--CCCEEEE
Confidence 45677888889999999999999874 7789999982 221111 12222221 1 1234589
Q ss_pred EEeccCCCCCeEEEEEEEcCC---CceEEEEEEEEeccccCCCCCccc-cCCCeeeecCCCeEEEEEEEee-CCCC-eEE
Q psy7036 72 ELDDVIETDAGLYKVKAKNKM---GEVAASINLNFSREQIDGLAPTFL-KKPSIRQEDDGKRLLFECRIQA-DPAP-TVI 145 (254)
Q Consensus 72 ~i~~~~~~d~G~Y~C~~~~~~---~~~~~~~~l~v~~~~~~~~~~~~~-~~~~~~~~~~g~~~~l~C~~~~-~~~~-~~~ 145 (254)
.|.+++.+|+|.|.|.+.+.. ........|.|........+|.+. ..+....+..|+.+.|.|.+.+ .|.+ .+.
T Consensus 78 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~ 157 (240)
T 3q5y_A 78 NMSALELEDSAMYFCASSLRWGDEQYFGPGTRLTVLEDLRNVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELS 157 (240)
T ss_dssp EECSCCGGGCEEEEEEEESSTTBCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEE
T ss_pred EECcCChhHCEEEEEEEccCCCcceEEcCCEEEEEeccccCCCCCeeEEeCCchhhcccCCceEEEEEEeeEECCCeEEE
Confidence 999999999999999997322 122334456665311111333332 2233334456899999999988 5555 789
Q ss_pred EEECCEecccCCcce--EEEcCCC-CceeeEEEEccCCCCC-ceeEEEEEEcCCCcce
Q psy7036 146 WSHSGVQVKEDKRHK--FSIDKDG-HSYFASLEIIDVTIED-AGKYKVTAKNELGESN 199 (254)
Q Consensus 146 W~~~~~~~~~~~~~~--~~~~~~~-~~~~~~l~i~~~~~~d-~G~y~C~~~~~~~~~~ 199 (254)
|+++|..+....... .....++ +...+.|.|.....+| .|.|+|.|.|......
T Consensus 158 W~~~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~~~~~ 215 (240)
T 3q5y_A 158 WWVNGKEVHSGVSTDPQAYKESNYSYSLSSRLRVSATFWHNPRNHFRCQVQFHGLSEE 215 (240)
T ss_dssp EEETTEEECTTEEECSSCEEEETTEEEEEEEEEEEHHHHSCTTCEEEEEEEECCBCTT
T ss_pred EEECCEECcCcEecCCceeeCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCCCc
Confidence 999999886432211 1122222 2334568999888888 6799999999765543
No 205
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.88 E-value=5.1e-22 Score=146.00 Aligned_cols=160 Identities=16% Similarity=0.183 Sum_probs=117.0
Q ss_pred CCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEEE
Q psy7036 8 APSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKVK 87 (254)
Q Consensus 8 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 87 (254)
+|.+.. ....+.+|+.++|.|.+. |.+.++| +|..+.... ....|.|..+..+|.|.|+|.
T Consensus 100 ~p~~~~--~~~~v~~G~~v~l~C~~~--p~~~i~W--~g~~~~~~~-------------~~~~l~i~~~~~~~~g~Y~C~ 160 (265)
T 2oz4_A 100 APNVIL--TKPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQPLG-------------PRAQLLLKATPEDNGRSFSCS 160 (265)
T ss_dssp CCEEEE--SCSEEETTCEEEEEEECC--TTSEEEE--SSCSSSCCS-------------SEECCEEECCGGGTTEEEEEE
T ss_pred Cceeec--CCceecCCCcEEEEEEcc--CCCEEEE--CCEEccCCC-------------CcEEEEEccccccCCceEEEE
Confidence 345543 345678999999999998 8899999 776652211 112688999999999999999
Q ss_pred EEcCC-CceE---EEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEE
Q psy7036 88 AKNKM-GEVA---ASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSI 163 (254)
Q Consensus 88 ~~~~~-~~~~---~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~ 163 (254)
+.|.. |... ..+.|.|...+.. .....+....+.+|+.+.|.|.+.|.|.+.+.|++++..+
T Consensus 161 a~n~~~g~~~~~s~~~~l~V~~~p~~----~~~~~p~~~~v~~g~~~~l~C~~~g~P~p~i~W~~~~~~~---------- 226 (265)
T 2oz4_A 161 ATLEVAGQLIHKNQTRELRVLYGPRL----DERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFP---------- 226 (265)
T ss_dssp EEEECSSSEEEEEEEEEEEEEEEEEC----CGGGSCSEEEEETTCEECCCCCCEEESCCEEEEEETTTEE----------
T ss_pred EEcCCCCCcccccccEEEEEEeCCcc----ccccCCCccEEcCCCeEEEEeECccCCCCeEEEEECCccc----------
Confidence 98544 5544 5667777632211 1122344567888999999999999999999999998721
Q ss_pred cCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEe
Q psy7036 164 DKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFD 207 (254)
Q Consensus 164 ~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~ 207 (254)
...+ .+. .++.+|+|.|+|.|.|..|.....+.|.|.
T Consensus 227 ~~~g-----~~~--~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 263 (265)
T 2oz4_A 227 LPIG-----ESV--TVTRDLEGTYLCRARSTQGEVTREVTVNVL 263 (265)
T ss_dssp CCTT-----SCE--ECCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCCC-----cEE--EeehhhCeEEEEEEECCCCcEEEEEEEEEe
Confidence 1122 121 377899999999999999999888888886
No 206
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.88 E-value=1.5e-21 Score=145.23 Aligned_cols=172 Identities=10% Similarity=0.107 Sum_probs=118.4
Q ss_pred eeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEEEEEcCCCceE-
Q psy7036 18 RQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKVKAKNKMGEVA- 96 (254)
Q Consensus 18 ~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~- 96 (254)
..+.+|+++.|.|.+. .|.+.++|++++........ . ... . .+. ...|+|.|+|.+.+..+...
T Consensus 105 ~~v~~G~~v~l~C~~~-~p~~~v~w~~~~~~~~~~~~--~--~~~---~---~~~----~~~d~G~Y~C~a~n~~~~~~s 169 (289)
T 3mjg_X 105 IFLTEITEITIPCRVT-DPQLVVTLHEKKGDVALPVP--Y--DHQ---R---GFS----GIFEDRSYICKTTIGDREVDS 169 (289)
T ss_dssp EEESSCCCEEECCCBS-CTTSCEEEEESSCCSCCCCC--E--ETT---T---EEE----ECCCSSEEEEEEEETTEEEEC
T ss_pred EEeecCCeEEEEeEcC-CCCceEEEEeCCCCCcccee--e--cCC---c---Cee----eeccCcEEEEEEEeCCceeee
Confidence 5688999999999998 77889999987522111100 0 000 0 111 36799999999997665432
Q ss_pred EEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCC-CCceeeEEE
Q psy7036 97 ASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKD-GHSYFASLE 175 (254)
Q Consensus 97 ~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~ 175 (254)
....|.|... .+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++...............+ .....+.|.
T Consensus 170 ~~~~l~v~~~----~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 245 (289)
T 3mjg_X 170 DAYYVYRLQV----SSINVSVNAVQTVVRQGENITLMCIVIGNEVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILH 245 (289)
T ss_dssp CCEEEEECCC----CCCCCEEEESCSEEETTSCEEEEEEEESCSSBEEEEECTTSSSSCCCCCEEEESCTTTTEEEEEEE
T ss_pred eeEEEEecCC----CCCCcEEeCCcceeEcCCCEEEEEEECCCCCcceEEEcCCccCCCcccccccccCCcceEEEEEEE
Confidence 3345666421 24444444444567899999999999999999999998776543322211112111 123446899
Q ss_pred EccCCCCCceeEEEEEEcCCCcceEEEEEEEec
Q psy7036 176 IIDVTIEDAGKYKVTAKNELGESNATISLNFDS 208 (254)
Q Consensus 176 i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~ 208 (254)
|.++..+|.|.|+|.|.|..|....+..|.|..
T Consensus 246 I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~ 278 (289)
T 3mjg_X 246 IPSAELEDSGTYTCNVTESVNDHQDEKAINITV 278 (289)
T ss_dssp ESSCCSSCCEEEEEEEEETTTTEEEEEEEEEEE
T ss_pred EcccChhhCcEEEEEeecCCCCceeEEEEEEEE
Confidence 999999999999999999999999888888875
No 207
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.88 E-value=5.3e-21 Score=140.33 Aligned_cols=181 Identities=15% Similarity=0.230 Sum_probs=116.8
Q ss_pred CCCeeEeCCCceeecCCCeEEEEEEEeeCC------CCceEEEeC--CE---Eeee---------CCcceEEEeecCCcc
Q psy7036 7 FAPSFTQKPQLRQEDEGNRLIFECQLLCNP------KPDIVWFRG--ET---QLSE---------DTRTVMKTTPIGTNK 66 (254)
Q Consensus 7 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~------~~~v~W~~~--~~---~~~~---------~~~~~~~~~~~~~~~ 66 (254)
..+.+.+.|..+.+.+|++|+|.|.+.+.+ .+.+.|||+ +. .+.. ..++.+. .. .
T Consensus 4 ~~~~v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~--~~---~ 78 (264)
T 2gjj_A 4 ADIVLTQTPSSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGS--GS---G 78 (264)
T ss_dssp CCCCEEEECSEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEE--EE---T
T ss_pred cccceEecCCeEEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEe--cC---C
Confidence 346788889899999999999999998776 678999984 22 1111 1222222 11 1
Q ss_pred eEEEEEEeccCCCCCeEEEEEEEcCCCc-eEEEEEEEEecccc------------CCCCCcc-ccCCCeeeecCCCeEEE
Q psy7036 67 YLVALELDDVIETDAGLYKVKAKNKMGE-VAASINLNFSREQI------------DGLAPTF-LKKPSIRQEDDGKRLLF 132 (254)
Q Consensus 67 ~~~~l~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~~l~v~~~~~------------~~~~~~~-~~~~~~~~~~~g~~~~l 132 (254)
....|.|.+++.+|+|.|.|.+.+..+. ......|.|...+. ....+.+ ...+....+.+|+.++|
T Consensus 79 ~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L 158 (264)
T 2gjj_A 79 TDFTLTIGSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPEVVKTGASVKI 158 (264)
T ss_dssp TEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEECC-------------------CCEEEECCCEEECTTCCEEE
T ss_pred CEEEEEECCCCHHHCEEEEEEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeCCCCEEEcCCCcEEE
Confidence 2348999999999999999999986542 22345667753210 0001111 12222346889999999
Q ss_pred EEEEeeCCC--CeEEEEECC--Ee---cc---c-----------CCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEE
Q psy7036 133 ECRIQADPA--PTVIWSHSG--VQ---VK---E-----------DKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTA 191 (254)
Q Consensus 133 ~C~~~~~~~--~~~~W~~~~--~~---~~---~-----------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~ 191 (254)
.|.+.+.+. +.+.|+|+. .. +. . ..+..+..... .....|.|.+++.+|+|.|.|.+
T Consensus 159 ~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~--~~~~~L~I~~v~~~DsG~Y~C~a 236 (264)
T 2gjj_A 159 SCKASGYSFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTS--SSTAFMQLNSLTSEDSADYYCVR 236 (264)
T ss_dssp EEEEESSCGGGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETT--TTEEEEEECSCCGGGCEEEEEEE
T ss_pred EEEEeCCccCCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCC--CCEEEEEECcCCcccCEEEEEEE
Confidence 999988764 789999963 21 10 0 11111211111 11348999999999999999999
Q ss_pred EcC
Q psy7036 192 KNE 194 (254)
Q Consensus 192 ~~~ 194 (254)
.|.
T Consensus 237 ~n~ 239 (264)
T 2gjj_A 237 SGN 239 (264)
T ss_dssp ECS
T ss_pred ecC
Confidence 985
No 208
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.88 E-value=4.6e-22 Score=150.39 Aligned_cols=185 Identities=16% Similarity=0.208 Sum_probs=116.3
Q ss_pred eeEeCCCceeecCCCeEEEEEEEeeC-CCC---ceEEEeCC-EEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEE
Q psy7036 10 SFTQKPQLRQEDEGNRLIFECQLLCN-PKP---DIVWFRGE-TQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLY 84 (254)
Q Consensus 10 ~~~~~~~~~~v~~g~~v~l~C~~~~~-~~~---~v~W~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 84 (254)
.+...|....+.+|++++|.|.+.+. |.+ .++|||++ ..+..... .......+.....+.|.|.+++..|+|.|
T Consensus 115 v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~-~~~~~~~g~~~~~~~L~I~~~~~~D~G~Y 193 (323)
T 2wqr_A 115 AYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTR-KEEKQRNGTLTVTSTLPVGTRDWIEGETY 193 (323)
T ss_dssp EEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCC-EEEECTTSCEEEEEEEECCHHHHHTTCCE
T ss_pred EEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccccC-CCccCCCCCEEEEEEEEECHHHccCCCCE
Confidence 34555666668899999999999875 555 89999975 43322111 11111111112344799999999999999
Q ss_pred EEEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeC-CCC-eEEEEECCEecccCCcc--e
Q psy7036 85 KVKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQAD-PAP-TVIWSHSGVQVKEDKRH--K 160 (254)
Q Consensus 85 ~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~-~~~W~~~~~~~~~~~~~--~ 160 (254)
+|.+.|..+.... .+.|........+|.+...........|+.+.|.|.+.+. |.+ .+.|+|++..+...... .
T Consensus 194 ~C~a~n~~~~~~~--~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~ 271 (323)
T 2wqr_A 194 QCRVTHPHLPRAL--MRSTTKTSGPRAAPEVYAFATPEWPGSRDKRTLACLIQNFMPEDISVQWLHNEVQLPDARHSTTQ 271 (323)
T ss_dssp EEEEECTTSSSCE--EEEECCCCSCCBCCEEEEEECCCCTTCTTEEEEEEEEEEEBSSCCEEEEEETTEECCGGGEEECC
T ss_pred EEEEECCCCCCCe--eeEEEccCCCCCCCEEEEeCCChHHhcCCcEEEEEEeeeeeCCCcEEEEEECCEECCCCceeecC
Confidence 9999987644322 3333211001134433222111112239999999999884 443 79999999987543111 0
Q ss_pred EEEcCCC-CceeeEEEEccCCCCCceeEEEEEEcCCCc
Q psy7036 161 FSIDKDG-HSYFASLEIIDVTIEDAGKYKVTAKNELGE 197 (254)
Q Consensus 161 ~~~~~~~-~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~ 197 (254)
.....++ +...+.|.|.....+|.|.|+|.|.|....
T Consensus 272 ~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 309 (323)
T 2wqr_A 272 PRKTKGSGFFVFSRLEVTRAEWEQKDEFICRAVHEAAS 309 (323)
T ss_dssp CEECSSSSEEEEEEEEEEHHHHHHCCCEEEEEECTTST
T ss_pred cccCCCCcEEEEEEEEEChHHccCCCEEEEEEEeCCCC
Confidence 1112222 234467999999999999999999998876
No 209
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.87 E-value=8.8e-22 Score=141.66 Aligned_cols=187 Identities=11% Similarity=0.114 Sum_probs=119.7
Q ss_pred CCee-EeCCCceeecCCCeEEEEEEEeeC-CC-C-ceEEEeCCEEe-eeCCcceEEEeecCCcceEEEEEEeccCCCCCe
Q psy7036 8 APSF-TQKPQLRQEDEGNRLIFECQLLCN-PK-P-DIVWFRGETQL-SEDTRTVMKTTPIGTNKYLVALELDDVIETDAG 82 (254)
Q Consensus 8 ~p~~-~~~~~~~~v~~g~~v~l~C~~~~~-~~-~-~v~W~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G 82 (254)
+|.+ ...|....+.+|++++|.|.+.+. |. + .++|+++|..+ ..... ......++.....+.|.|.+++..|+|
T Consensus 12 ~P~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~~~-~~~~~~~g~~~~~s~L~I~~~~~~D~g 90 (231)
T 2w59_A 12 PIQLYAIPPSPGELYISLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPDPM-VLQEHFNGTYSASSAVPVSTQDWLSGE 90 (231)
T ss_dssp CCEEEEECCCHHHHHTSCCCEEEEEEEEESCCTTCEEEEECSSSSCCCCCCC-EEEECTTSCEEEEEEEECCHHHHHTTC
T ss_pred CCEEEEeCcChhhcccCCceEEEEEEeCccCCCCeEEEEEcCCeeccccccc-cceECCCCcEEEEEEEEecchhccCCC
Confidence 5554 456777778899999999999884 63 4 99999998776 32211 111112222233457999999999999
Q ss_pred EEEEEEEcCCCceEEEEEEEEeccccCCCCCcccc-CCCeeeecCCCeEEEEEEEeeC-C-CCeEEEEECCEecccCCcc
Q psy7036 83 LYKVKAKNKMGEVAASINLNFSREQIDGLAPTFLK-KPSIRQEDDGKRLLFECRIQAD-P-APTVIWSHSGVQVKEDKRH 159 (254)
Q Consensus 83 ~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~-~~~~~~~~~g~~~~l~C~~~~~-~-~~~~~W~~~~~~~~~~~~~ 159 (254)
.|+|.+.+..+.... .+.|........+|.+.. .+....+ .+..+.|.|.+.++ | .+.+.|+|+|..+......
T Consensus 91 ~Y~C~~~~~~~~~~~--~~~v~~~~~~~~~P~v~v~~~~~~~~-~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~ 167 (231)
T 2w59_A 91 RFTCTVQHEELPLPL--SKSVYRNTGPTTPPLIYPFAPHPEEL-SLSRVTLSCLVRGFRPRDIEIRWLRDHRAVPATEFV 167 (231)
T ss_dssp CEEEEEECTTCSSCE--EEEECCCCSCCBCCEEEEECCCGGGG-GSSEEEEEEEEEEEBSSCCEEEEEETTEECCGGGCE
T ss_pred EEEEEEEcCCCCCce--EEEEecCCCCCcCCEEEEeCCCHHHh-ccCceEEEEEEEeccCCCcEEEEEECCEECCCcccc
Confidence 999999987754333 333321100112333322 2221122 24579999999985 4 3689999999988654311
Q ss_pred e--EEEc--------CC-C-CceeeEEEEccCCCCCceeEEEEEEcCCCcc
Q psy7036 160 K--FSID--------KD-G-HSYFASLEIIDVTIEDAGKYKVTAKNELGES 198 (254)
Q Consensus 160 ~--~~~~--------~~-~-~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~ 198 (254)
. .... .+ + +...+.|.|.....+|.|.|+|.|.|.....
T Consensus 168 ~~~~~~~~~~~~~~~~d~gt~~~~s~L~i~~~~~~~~g~YtC~v~n~~l~~ 218 (231)
T 2w59_A 168 TTAVLPEERTANGAGGDGDTFFVYSKMSVETAKWNGGTVFACMAVHEALPM 218 (231)
T ss_dssp ECCCEECCTTSCC---CCCCEEEEEEEEEEHHHHHTTCCEEEEEECTTSTT
T ss_pred cCccccCcccccccCCCCCeEEEEEEEEEeHHHcCCCCcEEEEEEcCCCCC
Confidence 1 1222 22 2 2345678888888889999999999987654
No 210
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.87 E-value=2.9e-21 Score=140.30 Aligned_cols=186 Identities=14% Similarity=0.214 Sum_probs=118.6
Q ss_pred eeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeC--CEE---e-ee----------CCcceEEEeecCCcceEEEEEE
Q psy7036 10 SFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRG--ETQ---L-SE----------DTRTVMKTTPIGTNKYLVALEL 73 (254)
Q Consensus 10 ~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~--~~~---~-~~----------~~~~~~~~~~~~~~~~~~~l~i 73 (254)
.+...|..+.+.+|++|+|.|.+.+.+.+.+.|||. +.. + .. ..++.+... ....++|.|
T Consensus 3 ~v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~----~~~~~sL~I 78 (245)
T 3nfj_J 3 TIHQWPATLVQPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRP----QDRQFILSS 78 (245)
T ss_dssp EEEEECSEEEEETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEE----ETTEEEEEE
T ss_pred eeeCCCceEEecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEec----CCCEEEEEE
Confidence 466778888999999999999999888899999982 211 1 00 122222221 123448999
Q ss_pred eccCCCCCeEEEEEEEcCCC------ceEEEEEEEEeccccCCCCCcccc-CCCeeeecCCCeEEEEEEEeeC-CCC-eE
Q psy7036 74 DDVIETDAGLYKVKAKNKMG------EVAASINLNFSREQIDGLAPTFLK-KPSIRQEDDGKRLLFECRIQAD-PAP-TV 144 (254)
Q Consensus 74 ~~~~~~d~G~Y~C~~~~~~~------~~~~~~~l~v~~~~~~~~~~~~~~-~~~~~~~~~g~~~~l~C~~~~~-~~~-~~ 144 (254)
.+++.+|+|.|.|.+.+..+ .......|.|........+|.+.. .+....+..|+.+.|.|.+.+. |++ .+
T Consensus 79 ~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v 158 (245)
T 3nfj_J 79 KKLLLSDSGFYLCAWSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVEL 158 (245)
T ss_dssp SSCCGGGCEEEEEEEECCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEE
T ss_pred CCCChhhCEEEEEEEeeccCCCceeEEECCCeEEEEEcccCCCCCCceEeecCCcccccCCCceEEEEEEccCcCCCEEE
Confidence 99999999999999998322 122344666653111112333321 2222234458999999999885 444 68
Q ss_pred EEEECCEecccCCcceEE--E-----cCCCCceeeEEEEccCCCCC-ceeEEEEEEcCCCcce
Q psy7036 145 IWSHSGVQVKEDKRHKFS--I-----DKDGHSYFASLEIIDVTIED-AGKYKVTAKNELGESN 199 (254)
Q Consensus 145 ~W~~~~~~~~~~~~~~~~--~-----~~~~~~~~~~l~i~~~~~~d-~G~y~C~~~~~~~~~~ 199 (254)
.|+++|..+......... . ....+...+.|.|.....+| .|.|+|.|.|......
T Consensus 159 ~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~~YtC~v~~~~~~~~ 221 (245)
T 3nfj_J 159 SWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 221 (245)
T ss_dssp EEEETTEEECTTEEECSSCEESSSSSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCSS
T ss_pred EEEECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEECCCCCc
Confidence 999999988643211100 0 11122234578888887777 6699999999866544
No 211
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.87 E-value=2.3e-21 Score=141.27 Aligned_cols=188 Identities=11% Similarity=0.181 Sum_probs=104.2
Q ss_pred CCceeecCCCeEEEEEEEeeCC--CCceEEEeCC--E---Ee-ee-----------CCcceEEEeecCCcceEEEEEEec
Q psy7036 15 PQLRQEDEGNRLIFECQLLCNP--KPDIVWFRGE--T---QL-SE-----------DTRTVMKTTPIGTNKYLVALELDD 75 (254)
Q Consensus 15 ~~~~~v~~g~~v~l~C~~~~~~--~~~v~W~~~~--~---~~-~~-----------~~~~~~~~~~~~~~~~~~~l~i~~ 75 (254)
|....+.+|++|+|.|.+.+.+ .+.+.|||.. . .+ .. ....++....+ .......|.|.+
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~sL~I~~ 85 (257)
T 3bn9_D 7 SGGGLVKPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRD-NSKNTLYLQMSS 85 (257)
T ss_dssp ECCEEECTTCEEEEEEEEESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEE-TTTTEEEEEEES
T ss_pred cCCEEEcCCCcEEEEEEeccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEec-CCCCEEEEEECC
Confidence 4566899999999999998765 5789999853 1 11 00 00112222111 112345899999
Q ss_pred cCCCCCeEEEEEEEcCCC----------c---eEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeC-CC
Q psy7036 76 VIETDAGLYKVKAKNKMG----------E---VAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQAD-PA 141 (254)
Q Consensus 76 ~~~~d~G~Y~C~~~~~~~----------~---~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~ 141 (254)
++.+|+|.|.|.+.+..+ . ......|.|... ...+|.+........+..|+.++|.|.+.+. |.
T Consensus 86 v~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~--~~~~P~v~~~~p~~~~~~g~~v~L~C~~~g~~P~ 163 (257)
T 3bn9_D 86 LRAEDTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSA--STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPE 163 (257)
T ss_dssp CCGGGCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSS--CCBCCEECCCCC-----------CCCEEEEEBSS
T ss_pred CChhhCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCC--CCcCCcEEEecCcccccCCCcEEEEEEEeeEECC
Confidence 999999999999998754 1 112346677531 1123443332222235678999999999885 76
Q ss_pred C-eEEEEECCEecccCCcceEEEcCCC-CceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEe
Q psy7036 142 P-TVIWSHSGVQVKEDKRHKFSIDKDG-HSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFD 207 (254)
Q Consensus 142 ~-~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~ 207 (254)
+ .+.|++++..+........ ...++ +...+.|.|.+...+| |.|+|.|.|..........+...
T Consensus 164 pi~v~W~k~g~~~~~~~~~~~-~~~~g~y~~~s~L~I~~~~~~~-g~YtC~v~n~~~~~~~~~~i~~~ 229 (257)
T 3bn9_D 164 PVTVSWNSGALTSGVHTFPAV-LQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEPK 229 (257)
T ss_dssp CCEEEETTTTCCSSCEECCCE-ECTTSCEEEEEECCCC--------CEEEEEEEGGGTEEEEEEECCC
T ss_pred CcEEEEeeCCCcCCcEecCCe-EcCCCCEEEEEEEEEcccccCC-CeEEEEEEecCCCcCEEEEEcCc
Confidence 6 8999999876432111111 12222 2334578888887778 99999999976555555544433
No 212
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.87 E-value=9.9e-22 Score=134.63 Aligned_cols=155 Identities=10% Similarity=0.131 Sum_probs=106.5
Q ss_pred CceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCc----------ceEEEeecCCcceEEEEEEeccCCCCCeEEE
Q psy7036 16 QLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTR----------TVMKTTPIGTNKYLVALELDDVIETDAGLYK 85 (254)
Q Consensus 16 ~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 85 (254)
+.+.+.+|++|+|.|.+. .|.+.+.|++++..+..... .++..... ..+|.|.+++..|+|.|+
T Consensus 3 ~~v~~~~G~~VtL~c~~~-~~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~-----~~sL~I~~v~~~DsG~Y~ 76 (171)
T 1ccz_A 3 QQIYGVVYGNVTFHVPSN-VPLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTV-----SGSLTIYNLTSSDEDEYE 76 (171)
T ss_dssp EEEEEETTCCEEECCCCS-SCCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTT-----TCCEEECSCCGGGCEEEE
T ss_pred cEEEEEcCCCEEEcCCCC-CCcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCC-----CCeEEECCCChhhCceEE
Confidence 346788999999999985 47889999999875432111 11211111 127999999999999999
Q ss_pred EEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcC
Q psy7036 86 VKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDK 165 (254)
Q Consensus 86 C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~ 165 (254)
|.+.+..+ ...+.|.|.... ..|.+. ..... ..|.|.+.+.|.+.+.|++++..+......
T Consensus 77 C~~~n~~~--~~~~~L~V~~~~---~~p~i~-------~~~~~-~~L~C~~~~~p~p~i~W~~~~~~l~~~~~~------ 137 (171)
T 1ccz_A 77 MESPNITD--TMKFFLYVLEMV---SKPMIY-------WECSN-ATLTCEVLEGTDVELKLYQGKEHLRSLRQK------ 137 (171)
T ss_dssp EECTTCCS--CEEEEEEEECCC---CCCEEE-------EETTT-TEEEEECSSCSSCEEEEEETTEEEEEESSS------
T ss_pred EEEeCCCC--cEEEEEEEECcC---CCCEEE-------EecCC-cEEEEEeCCCCCcEEEEEECCEECcCCcce------
Confidence 99998777 566777776311 112221 11111 278999998899999999999877532211
Q ss_pred CCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEE
Q psy7036 166 DGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISL 204 (254)
Q Consensus 166 ~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~ 204 (254)
.+.+. ..+|.|.|+|.|.|..+.......|
T Consensus 138 -------~l~~~--~~~~~g~Y~C~a~N~~~~~~~~~~l 167 (171)
T 1ccz_A 138 -------TMSYQ--WTNLRAPFKCKAVNRVSQESEMEVV 167 (171)
T ss_dssp -------EEEEE--CSCCSSCEEEEEEETTEEEEEEECC
T ss_pred -------EEEEe--ccCCCceEEEEEEcccCcccceeEE
Confidence 34433 3678999999999999887665544
No 213
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.87 E-value=1.4e-21 Score=143.85 Aligned_cols=187 Identities=12% Similarity=0.189 Sum_probs=119.2
Q ss_pred CCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeC--CEE------------eeeC----CcceEEEeecCCcceEE
Q psy7036 8 APSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRG--ETQ------------LSED----TRTVMKTTPIGTNKYLV 69 (254)
Q Consensus 8 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~--~~~------------~~~~----~~~~~~~~~~~~~~~~~ 69 (254)
.+.++..|..+.+.+|++|+|.|.+. .+.+.+.|||. +.. .... .++.+ ... ....+
T Consensus 26 ~~~v~~~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~--~~~--~~~~~ 100 (268)
T 3pl6_D 26 GAGVSQTPSNKVTEKGKYVELRCDPI-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFA--VRP--EGSVS 100 (268)
T ss_dssp -SSCBCCCSEEEEETTCCEEEEEBCB-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEE--ECT--TSSSE
T ss_pred CceeEeCCCEEEecCCCCEEEEEEeC-CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEE--Eec--CCCEE
Confidence 45567778888999999999999986 67789999982 211 1111 22222 211 12345
Q ss_pred EEEEeccCCCCCeEEEEEEEcC--CCceEEEEEEEEeccccCCCCCccc-cCCCeeeecCCCeEEEEEEEeeCCCC--eE
Q psy7036 70 ALELDDVIETDAGLYKVKAKNK--MGEVAASINLNFSREQIDGLAPTFL-KKPSIRQEDDGKRLLFECRIQADPAP--TV 144 (254)
Q Consensus 70 ~l~i~~~~~~d~G~Y~C~~~~~--~~~~~~~~~l~v~~~~~~~~~~~~~-~~~~~~~~~~g~~~~l~C~~~~~~~~--~~ 144 (254)
+|.|.+++.+|+|.|+|.+.+. .........|.|........+|.+. ..+....+..|+.++|.|.+.+.+++ .+
T Consensus 101 sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v 180 (268)
T 3pl6_D 101 TLKIQRTERGDSAVYLCATSALGDTQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVEL 180 (268)
T ss_dssp EEEECSCCGGGCEEEEEEEESSSSSCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEE
T ss_pred EEEECCCCcccCEEEEEEEecCCCceeeCCcEEEEEecCcccccCCceEEeCCCcccccCCCceEEEEEECcccCCCeEE
Confidence 8999999999999999999974 2223334566665321111234322 22333344568999999999986554 89
Q ss_pred EEEECCEecccCCcceE------EEcCCC-CceeeEEEEccCCCCC-ceeEEEEEEcCCCcce
Q psy7036 145 IWSHSGVQVKEDKRHKF------SIDKDG-HSYFASLEIIDVTIED-AGKYKVTAKNELGESN 199 (254)
Q Consensus 145 ~W~~~~~~~~~~~~~~~------~~~~~~-~~~~~~l~i~~~~~~d-~G~y~C~~~~~~~~~~ 199 (254)
.|+++|..+........ ....++ +...+.|.|.....+| .|.|+|.|.|......
T Consensus 181 ~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~l~~~ 243 (268)
T 3pl6_D 181 SWWVNGKEVHSGVCTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 243 (268)
T ss_dssp EEEESSSEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBCTT
T ss_pred EEEECCEECCCCeEeccccccccccCCCCcEEEEEEEEEcHHHhccCCCEEEEEEEcCCCCCC
Confidence 99999988754321100 000122 2334578888877777 9999999999866543
No 214
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.87 E-value=1.2e-21 Score=147.64 Aligned_cols=174 Identities=11% Similarity=0.142 Sum_probs=112.2
Q ss_pred CCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEEE
Q psy7036 8 APSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKVK 87 (254)
Q Consensus 8 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 87 (254)
+|.+...+... +.+|++++|.|.+. .+.+.+.|++++..+......... ........|.|.+++..|+|.|+|.
T Consensus 119 ~p~~~~~~~~~-v~~G~~v~L~C~~~-~~~~~~~w~k~g~~~~~~~~~~~~----~~~~~~~~L~i~~v~~~D~G~Y~C~ 192 (316)
T 3vh8_G 119 KPSLLAHPGPL-VKSGERVILQCWSD-IMFEHFFLHKEGISKDPSRLVGQI----HDGVSKANFSIGPMMLALAGTYRCY 192 (316)
T ss_dssp CCEEEEESCSE-EETTCCEEEEEEES-SCCSEEEEEETTCCSCCEEEECEE----ETTEEEEEEEECSCCGGGCEEEEEE
T ss_pred CCeEEecCCCc-cCCCCeEEEEEcCC-CCCcEEEEEECCCccccceeeeee----cCCCceEEEEECCCChhhCceEEEE
Confidence 56666666554 88999999999995 556789999998766322111110 0112234799999999999999999
Q ss_pred EEcCCCce-----EEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEE
Q psy7036 88 AKNKMGEV-----AASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFS 162 (254)
Q Consensus 88 ~~~~~~~~-----~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~ 162 (254)
+.|..+.. ...+.|.|... ..+|.+...+. ..+.+|+.++|.|.+. .+.+.+.|+|++..+...... .
T Consensus 193 a~n~~g~~~~s~~s~~~~l~V~~~---~~~p~i~~~~~-~~v~~G~~v~L~C~~~-~~~~~~~W~k~g~~~~~~~~~--~ 265 (316)
T 3vh8_G 193 GSVTHTPYQLSAPSDPLDIVVTGP---YEKPSLSAQPG-PKVQAGESVTLSCSSR-SSYDMYHLSREGGAHERRLPA--V 265 (316)
T ss_dssp EECTTCTTBCCCCCCCEEEEEECS---SCCCEEEEESC-SCCCTTSCCEEEEEES-SCCSEEEEEETTSSCCEEEEC--E
T ss_pred EecCCCCccccCCCCCEEEEecCC---CCCCeEEeCCC-CeecCCCcEEEEEECC-CCCcEEEEEECCCcCCCceec--e
Confidence 99887641 34556666531 12333333322 2567899999999986 577899999998765422111 0
Q ss_pred EcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCc
Q psy7036 163 IDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGE 197 (254)
Q Consensus 163 ~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~ 197 (254)
.. ........|.|.+++ |+|.|+|.+.|..+.
T Consensus 266 ~~-~~~~~~~~L~i~~v~--D~G~Y~C~a~n~~~~ 297 (316)
T 3vh8_G 266 RK-VNRTFQADFPLGPAT--HGGTYRCFGSFRHSP 297 (316)
T ss_dssp EC-TTSCEEEEEECC-------CEEEEEEEBTTBT
T ss_pred ec-cCCceeEEEEcCCcC--CCEEEEEEeecCCCc
Confidence 11 111123479999999 999999999997653
No 215
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.87 E-value=3.4e-21 Score=132.94 Aligned_cols=158 Identities=15% Similarity=0.229 Sum_probs=109.5
Q ss_pred CCceeecCCCeEEEEEEEe--eCCCCceEEEe--CCEEeeeC--------CcceEEEeecCCcceEEEEEEeccCCCCCe
Q psy7036 15 PQLRQEDEGNRLIFECQLL--CNPKPDIVWFR--GETQLSED--------TRTVMKTTPIGTNKYLVALELDDVIETDAG 82 (254)
Q Consensus 15 ~~~~~v~~g~~v~l~C~~~--~~~~~~v~W~~--~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G 82 (254)
.+.+.+.+|++|+|.|... +.+.+.|.|++ ++..+... ...++....++ +|.|.+++..|+|
T Consensus 6 ~~~v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ng------sL~I~~v~~~DsG 79 (182)
T 1hnf_A 6 ALETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNG------TLKIKHLKTDDQD 79 (182)
T ss_dssp CEEEEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTTS------CEEECSCCGGGCE
T ss_pred ccEEEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCCC------CEEECCCChhhCE
Confidence 4556789999999999543 24567899999 88776311 11223223222 6999999999999
Q ss_pred EEEEEEEcCCCceE--EEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcce
Q psy7036 83 LYKVKAKNKMGEVA--ASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHK 160 (254)
Q Consensus 83 ~Y~C~~~~~~~~~~--~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~ 160 (254)
.|+|.+.|..|... ..+.|.|.+.. ..|.+ .. .+..+.|.|.+.+.|.+.+.|++++..+ ..
T Consensus 80 ~Y~c~~~n~~g~~~~~~~~~L~V~~~~---~~P~i-------~~-~~~~v~L~C~~~~~p~~~~~W~~~g~~l-~~---- 143 (182)
T 1hnf_A 80 IYKVSIYDTKGKNVLEKIFDLKIQERV---SKPKI-------SW-TCINTTLTCEVMNGTDPELNLYQDGKHL-KL---- 143 (182)
T ss_dssp EEEEEEEETTSCEEEEEEEEEEEECCC---CCCEE-------EE-ETTTTEEEEECSSCSSCEEEEEESSCEE-EE----
T ss_pred EEEEEEEeCCCceeEEEEEEEEEcCcC---CCCEE-------EE-ccCcEEEEeEccCCCCCEEEEEECCEEC-CC----
Confidence 99999999887653 45667775310 12221 11 2336899999998889999999999877 11
Q ss_pred EEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEE
Q psy7036 161 FSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISL 204 (254)
Q Consensus 161 ~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~ 204 (254)
... .+.+.. ..+|.|.|+|.|.|+.+.......+
T Consensus 144 ----~~~-----~i~~~~-~~~d~G~Y~C~a~N~~~~~~s~~~~ 177 (182)
T 1hnf_A 144 ----SQR-----VITHKW-TTSLSAKFKCTAGNKVSKESSVEPV 177 (182)
T ss_dssp ----ESS-----CEEEEC-CSCEEEEEEEEEECSSCEEEEEEEE
T ss_pred ----CCc-----EEEEec-ccCCCcEEEEEEEeCCCCcEEccee
Confidence 011 243333 4689999999999999987766554
No 216
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.87 E-value=9.7e-21 Score=135.41 Aligned_cols=179 Identities=13% Similarity=0.182 Sum_probs=113.2
Q ss_pred eCCCceeecCCCeEEEEEEEeeCC--CCceEEEeCC--EE---e-e--e-------------CCcceEEEeecCCcceEE
Q psy7036 13 QKPQLRQEDEGNRLIFECQLLCNP--KPDIVWFRGE--TQ---L-S--E-------------DTRTVMKTTPIGTNKYLV 69 (254)
Q Consensus 13 ~~~~~~~v~~g~~v~l~C~~~~~~--~~~v~W~~~~--~~---~-~--~-------------~~~~~~~~~~~~~~~~~~ 69 (254)
..|....+.+|++|+|.|.+.+.+ .+.+.|||.. .. + . . ..++.+... . ....+
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~--~-~~~~~ 81 (221)
T 3m8o_H 5 VESGGGLVQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRD--D-SKNTA 81 (221)
T ss_dssp EEESCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEE--G-GGTEE
T ss_pred EccCCEEEcCCCCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEec--C-CCCEE
Confidence 345567899999999999998643 5789999732 11 1 0 0 122222211 1 12345
Q ss_pred EEEEeccCCCCCeEEEEEEEcCC--CceEEEEEEEEeccccCCCCCccc-cCCCeeeecCCCeEEEEEEEee-CCC--Ce
Q psy7036 70 ALELDDVIETDAGLYKVKAKNKM--GEVAASINLNFSREQIDGLAPTFL-KKPSIRQEDDGKRLLFECRIQA-DPA--PT 143 (254)
Q Consensus 70 ~l~i~~~~~~d~G~Y~C~~~~~~--~~~~~~~~l~v~~~~~~~~~~~~~-~~~~~~~~~~g~~~~l~C~~~~-~~~--~~ 143 (254)
+|.|.+++.+|+|.|.|.+.+.. ........|.|... ...+|.+. ..+... ..|+.++|.|.+.+ .|. +.
T Consensus 82 sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~--~~~~p~v~~~~~~~~--~~g~~v~L~C~~~~~~P~~~~~ 157 (221)
T 3m8o_H 82 FLQMNSLKSDDTAMYYCVIRGDVYNRQWGQGTLVTVSSA--SPTSPKVFPLSLCST--QPDGNVVIACLVQGFFPQEPLS 157 (221)
T ss_dssp EEEECSCCGGGCEEEEEEEESCTTCCCBBCCEEEEECSC--CCBCCEEEEEECCSC--CCTTEEEEEEEEEEEBSSCSEE
T ss_pred EEEECCCCHHHCEEEEEEEECCChhheECCCEEEEEecC--CCCCCeEEEecCccc--ccCCCEEEEEEEEeeECCCCEE
Confidence 79999999999999999998764 12233445666421 11233332 122212 57999999999988 665 38
Q ss_pred EEEEECCEecccCCcceEEEcCCC-CceeeEEEEccCCCCCceeEEEEEEcCCCcc
Q psy7036 144 VIWSHSGVQVKEDKRHKFSIDKDG-HSYFASLEIIDVTIEDAGKYKVTAKNELGES 198 (254)
Q Consensus 144 ~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~ 198 (254)
+.|++++..+............++ +...+.|.|.....+|.|.|+|.|.|..+..
T Consensus 158 v~W~~~g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~v~~~~~~~ 213 (221)
T 3m8o_H 158 VTWSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPS 213 (221)
T ss_dssp EEESCCSTTCEEEECCCEECSSSSCEEEEEEEEEEGGGSCTTCEEEEEEEETTSCC
T ss_pred EEEEECCEECceEEcCceeeCCCCcEEEEEEEEECHHHcCCCCeEEEEEEECCCCc
Confidence 999998876632211111101222 2334579999999999999999999987543
No 217
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.87 E-value=3.9e-21 Score=136.91 Aligned_cols=185 Identities=21% Similarity=0.290 Sum_probs=125.8
Q ss_pred CCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEE
Q psy7036 7 FAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKV 86 (254)
Q Consensus 7 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 86 (254)
.+|.| ..|....+.+|+.+.|.|.+.|.|.+.+.|+|+|..+......++...... ....|.|.+++..|+|.|+|
T Consensus 18 ~~P~~-~~p~~~~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~---~~~~L~i~~~~~~d~G~Y~C 93 (215)
T 3mtr_A 18 YAPKL-QGPVAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTP---SASYLEVTPDSENDFGNYNC 93 (215)
T ss_dssp EEEEE-ECCSEEEECTTCCEEEEEEEEEESCCEEEEEETTEESSCSSSCSEEEEEET---TEEEEEECCCSGGGCEEEEE
T ss_pred cCCcc-cCCceEEEECCCCEEEEEEEeecCCCEEEEEECCeECCCCCCccEEEecCC---CeeEEEEecCChhhCeEEEE
Confidence 46777 577778899999999999999999999999999999876543333322211 13489999999999999999
Q ss_pred EEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEee----CCCC--eEEEEECCEecccCCcce
Q psy7036 87 KAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQA----DPAP--TVIWSHSGVQVKEDKRHK 160 (254)
Q Consensus 87 ~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~----~~~~--~~~W~~~~~~~~~~~~~~ 160 (254)
.+.|..|.....+.|.|...+ .+|.. ......+..+.+.|.... .|.. .+.|.+++....... .
T Consensus 94 ~a~n~~g~~~~~~~l~v~~~P---~~p~~-----~~~~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~--~ 163 (215)
T 3mtr_A 94 TAVNRIGQESLEFILVQADTP---SSPSI-----DQVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSK--W 163 (215)
T ss_dssp EEECSSCEEEEEEEEEECCCC---CCCEE-----EEEEEETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEE--E
T ss_pred EEEECCCceEEEEEEEECCCC---CCCcc-----eEEEEecceEEEEEecCCccCCCceEEEEEEEEECCCCccccc--c
Confidence 999999998888888886321 11111 111234567888887322 2222 367877664321100 0
Q ss_pred EEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEe
Q psy7036 161 FSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFD 207 (254)
Q Consensus 161 ~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~ 207 (254)
....... ....+.|.++...+.|.|+|.|.|..|....+..+.+.
T Consensus 164 ~~~~~~~--~~~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~ 208 (215)
T 3mtr_A 164 YDAKEAS--MEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFK 208 (215)
T ss_dssp EEHHHHH--HHTEEEEECCCTTCEEEEEEEEEESSCBCCCCCCEEEE
T ss_pred ccccccc--ccccEEECCCCCCCEEEEEEEEEeCCcccCcccceeeE
Confidence 0000000 00279999999999999999999999977655555554
No 218
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.86 E-value=8.5e-20 Score=146.07 Aligned_cols=222 Identities=11% Similarity=0.138 Sum_probs=131.8
Q ss_pred CCCeEEEEEEEeeC-CCC-ceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEEEEEcCCCceEEEE
Q psy7036 22 EGNRLIFECQLLCN-PKP-DIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKVKAKNKMGEVAASI 99 (254)
Q Consensus 22 ~g~~v~l~C~~~~~-~~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~ 99 (254)
.|+.++|.|.+.+. |.+ .++|++++...... ........++.....+.|.|.+.... .|.|+|.+.|..+......
T Consensus 149 ~~~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~-~~~~~~~~~g~~~~~s~L~i~~~~~~-~g~ytC~v~n~~~~~~~~~ 226 (512)
T 1zvo_C 149 DNSPVVLACLITGYHPTSVTVTWYMGTQSQPQR-TFPEIQRRDSYYMTSSQLSTPLQQWR-QGEYKCVVQHTASKSKKEI 226 (512)
T ss_pred CCCeEEEEEEEEeeecCceEEEEEcCcccCceE-ecCceecCCCCEEEEEEEEEcHHHcC-CceEEEEEEeCCCCceEEE
Confidence 46899999999885 654 89999965432100 00001111222233456889888777 9999999999887644433
Q ss_pred -----------EEEEecccc----------------------------------------------CCCCCcc-ccCCCe
Q psy7036 100 -----------NLNFSREQI----------------------------------------------DGLAPTF-LKKPSI 121 (254)
Q Consensus 100 -----------~l~v~~~~~----------------------------------------------~~~~~~~-~~~~~~ 121 (254)
.+.+...+. ...+|.+ ...+..
T Consensus 227 ~~~~~~~~~~~~v~l~~pp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~p~v~~~~p~~ 306 (512)
T 1zvo_C 227 FRWPESPKAQASSVPTAQPQAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPAV 306 (512)
T ss_pred ecCCCCCCcCCEEEEeCCCchhccccccccCchhhccCcccccceeccCCcccccccCcccccCCCCCCCCEEEEECCCh
Confidence 223321000 0012222 122222
Q ss_pred eeecCCCeEEEEEEEeeCCC--CeEEEEECCEecccCCc-ceEEEcCCC-CceeeEEEEccCCCCCceeEEEEEEcCCCc
Q psy7036 122 RQEDDGKRLLFECRIQADPA--PTVIWSHSGVQVKEDKR-HKFSIDKDG-HSYFASLEIIDVTIEDAGKYKVTAKNELGE 197 (254)
Q Consensus 122 ~~~~~g~~~~l~C~~~~~~~--~~~~W~~~~~~~~~~~~-~~~~~~~~~-~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~ 197 (254)
..+..|+.+.|.|.+.++++ ..+.|++++..+..... .......++ +...+.|.|.....+|.|.|+|.|.|..+.
T Consensus 307 ~~~~~g~~~~L~C~v~g~~P~~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~~~~ 386 (512)
T 1zvo_C 307 QDLWLRDKATFTCFVVGSDLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHPSLP 386 (512)
T ss_pred HHhccCCceEEEEEEeceECCCeEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEeCCCC
Confidence 33557999999999988644 38999999988652111 112222233 244568999999999999999999998775
Q ss_pred ceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEE-EEEEEeccCCC--ceeC
Q psy7036 198 SNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIV-IECRLVGEPEP--TISW 254 (254)
Q Consensus 198 ~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~-l~C~~~~~p~p--~~~W 254 (254)
.. ...+....... ...+|.+...+... .|+ .+. |.|.+.|++++ .+.|
T Consensus 387 ~~-~~~~~~~~~~~----~~~~p~v~~~~~~~---~~~-~~~~L~C~~~g~~P~~i~v~W 437 (512)
T 1zvo_C 387 PQ-RLMALREPAAQ----APVKLSLNLLASSD---PPE-AASWLLCEVSGFSPPNILLMW 437 (512)
T ss_pred CC-ceeEEeecCCC----CCCCCEEEEEccCc---CCC-CceEEEEEEeeeCCCCcEEEE
Confidence 53 32232211000 01245444333222 577 899 99999996443 4778
No 219
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.86 E-value=5.6e-21 Score=140.61 Aligned_cols=183 Identities=16% Similarity=0.203 Sum_probs=113.4
Q ss_pred CCCeeEeCCCceeecCCCeEEEEEEEeeCC-----CCceEEEeCC--E---Eeee---------CCcceEEEeecCCcce
Q psy7036 7 FAPSFTQKPQLRQEDEGNRLIFECQLLCNP-----KPDIVWFRGE--T---QLSE---------DTRTVMKTTPIGTNKY 67 (254)
Q Consensus 7 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~-----~~~v~W~~~~--~---~~~~---------~~~~~~~~~~~~~~~~ 67 (254)
..+.+.+.|....+.+|++++|.|.+.+.+ .+.+.|||++ . .+.. ..++.+. .. ..
T Consensus 14 ~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~--~~---~~ 88 (268)
T 1x9q_A 14 SDVVMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGS--GS---GT 88 (268)
T ss_dssp CCCCEEEECSEECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEE--EE---TT
T ss_pred ccceEEeeCCeEEecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEE--cC---CC
Confidence 356677888888999999999999998766 4789999853 1 1111 1222222 11 12
Q ss_pred EEEEEEeccCCCCCeEEEEEEEcCCCc-eEEEEEEEEeccccCC---CCCc--------------cccCCCeeeecCCCe
Q psy7036 68 LVALELDDVIETDAGLYKVKAKNKMGE-VAASINLNFSREQIDG---LAPT--------------FLKKPSIRQEDDGKR 129 (254)
Q Consensus 68 ~~~l~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~~l~v~~~~~~~---~~~~--------------~~~~~~~~~~~~g~~ 129 (254)
...|.|.+++.+|+|.|.|.+.+..+. ......|.|....... .+|. ....+....+.+|+.
T Consensus 89 ~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~p~~pp~~~~~~~~~~~~~~v~~~~~~~~~v~~G~~ 168 (268)
T 1x9q_A 89 DFTLKINRVEAEDLGVYFCSQSTHVPWTFGGGTKLEIKSSADDAKKDAAKKDDAKKDDAKKDGGVKLDETGGGLVQPGGA 168 (268)
T ss_dssp EEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEC------------------------CGGGCEEEEECCEEECTTCC
T ss_pred EEEEEECCCChhHCEEEEEEEecCCCceEcCCEEEEEccCccCCCccccccccccccccccccceEEECCCceEecCCCc
Confidence 347999999999999999999987543 2223455654321100 1110 112223457889999
Q ss_pred EEEEEEEeeCCC--CeEEEEECC--Eecc-----------------cCCcceEEEcCCCCceeeEEEEccCCCCCceeEE
Q psy7036 130 LLFECRIQADPA--PTVIWSHSG--VQVK-----------------EDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYK 188 (254)
Q Consensus 130 ~~l~C~~~~~~~--~~~~W~~~~--~~~~-----------------~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~ 188 (254)
++|.|.+.+.+. +.+.|+++. ..+. .....++....+.......|.|.+++.+|+|.|.
T Consensus 169 v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~ 248 (268)
T 1x9q_A 169 MKLSCVTSGFTFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQMNNLRVEDTGIYY 248 (268)
T ss_dssp EEEEEEEESSCGGGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEE
T ss_pred EEEEEEecCccccccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEECCCCHHHCEEEE
Confidence 999999988763 789999852 2110 0011122221111111247999999999999999
Q ss_pred EEEEcC
Q psy7036 189 VTAKNE 194 (254)
Q Consensus 189 C~~~~~ 194 (254)
|.+.+.
T Consensus 249 C~a~~~ 254 (268)
T 1x9q_A 249 CTGASY 254 (268)
T ss_dssp EEEEET
T ss_pred EEEccC
Confidence 999874
No 220
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.86 E-value=8.5e-21 Score=131.09 Aligned_cols=157 Identities=10% Similarity=0.096 Sum_probs=105.6
Q ss_pred CCceeecCCCeEEEEEEEee-CCCCceEEEeC-CEEeee-C---------Cc--ceEEEeecCCcceEEEEEEeccCCCC
Q psy7036 15 PQLRQEDEGNRLIFECQLLC-NPKPDIVWFRG-ETQLSE-D---------TR--TVMKTTPIGTNKYLVALELDDVIETD 80 (254)
Q Consensus 15 ~~~~~v~~g~~v~l~C~~~~-~~~~~v~W~~~-~~~~~~-~---------~~--~~~~~~~~~~~~~~~~l~i~~~~~~d 80 (254)
...+.+.+|++|+|.|.+.+ .+.+.+.|+|+ +..+.. . .. .++.... ...+|.|.+++..|
T Consensus 6 ~~~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~-----~~~sL~I~~v~~~D 80 (180)
T 2dru_A 6 VPNVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDK-----TNGALRIYNVSKED 80 (180)
T ss_dssp CCEEEEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECT-----TTCCEEECSCCGGG
T ss_pred cceEEEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeC-----CCccEEEcCCCHHH
Confidence 34568899999999999854 34678999994 333211 0 11 1222211 11279999999999
Q ss_pred CeEEEEEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcce
Q psy7036 81 AGLYKVKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHK 160 (254)
Q Consensus 81 ~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~ 160 (254)
+|.|+|.+.+.. .....+.|.|.... ..|.+ .. .+..+.|.|.+...|.+.+.|++++..+..
T Consensus 81 ~G~Y~C~v~~~~-~~~~~~~L~V~~~~---~~P~i-------~~-~~~~v~L~C~~~~gp~p~i~W~~~~~~l~~----- 143 (180)
T 2dru_A 81 RGDYYMRMLHET-EDQWKITMEVYEMV---SKPMI-------YW-ECSNATLTCEVLEGTDVELKLYQGKEHLRS----- 143 (180)
T ss_dssp CEEEEEEEESSS-EEEEEEEEEEECCC---CCCEE-------EE-EGGGTEEEEECSSCTTCEEEEEETTEEEEE-----
T ss_pred CeEEEEEEEcCC-eEEEEEEEEEECCC---CCCEE-------Ee-cCCCEEEEEEeCCCCCCEEEEEECCeECcC-----
Confidence 999999998766 55667778876310 11211 11 345699999993338899999999987741
Q ss_pred EEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEE
Q psy7036 161 FSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATIS 203 (254)
Q Consensus 161 ~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~ 203 (254)
..+. +|.+.. .+|.|.|+|.|.|..+.......
T Consensus 144 ---~~~~-----~l~~~~--~~d~g~Y~C~a~N~~~~~~~~~~ 176 (180)
T 2dru_A 144 ---LRQK-----TMSYQW--TNLRAPFKCKAVNRVSQESEMEV 176 (180)
T ss_dssp ---ESSS-----EEEEEC--SCCSSCEEEEEEETTEEEEEEEC
T ss_pred ---CCCC-----EEEEEE--hhcCccEEEEEecCcCcccccee
Confidence 1111 566533 78999999999999887665543
No 221
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.86 E-value=8.3e-21 Score=135.17 Aligned_cols=182 Identities=12% Similarity=0.183 Sum_probs=110.5
Q ss_pred CCceeecCCCeEEEEEEEeeCC--CCceEEEeCC--EE---e-ee----------CCcceEEEeecCCcceEEEEEEecc
Q psy7036 15 PQLRQEDEGNRLIFECQLLCNP--KPDIVWFRGE--TQ---L-SE----------DTRTVMKTTPIGTNKYLVALELDDV 76 (254)
Q Consensus 15 ~~~~~v~~g~~v~l~C~~~~~~--~~~v~W~~~~--~~---~-~~----------~~~~~~~~~~~~~~~~~~~l~i~~~ 76 (254)
|....+.+|++++|.|.+.+.+ .+.+.|||++ .. + .. ....++....+. ....++|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~-~~~~~~L~I~~v 85 (215)
T 1c5d_H 7 SGPGLVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDT-SKSQVFLKMNSL 85 (215)
T ss_dssp ECCCEECTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEET-TTTEEEEEESSC
T ss_pred CCCeeecCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeC-CCceEEEEECCC
Confidence 5667899999999999998754 5789999852 11 1 10 011222222111 123458999999
Q ss_pred CCCCCeEEEEEEEcCCCc---eEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeC-CCC-eEEEEECCE
Q psy7036 77 IETDAGLYKVKAKNKMGE---VAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQAD-PAP-TVIWSHSGV 151 (254)
Q Consensus 77 ~~~d~G~Y~C~~~~~~~~---~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~-~~~W~~~~~ 151 (254)
+.+|+|.|.|.+.+..+. ......|.|... ...+|.+........+..|+.+.|.|.+.+. |.+ .+.|++++.
T Consensus 86 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~--~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~ 163 (215)
T 1c5d_H 86 QTEDTAIYFCTREDGWNYFDYWGPGTMVTVSSA--QTTAPSVYPLAPGCGDTTSSTVTLGCLVKGYFPEPVTVTWNSGAL 163 (215)
T ss_dssp CGGGCEEEEEEECCSSSCSCCBCCCEEEEECSS--CCBCCCEEEECCCSSCCCCSSEEEEEEEEEEBSSCCEEEEGGGTT
T ss_pred CcccCEEEEEEEecCCcccceEcCCEEEEecCC--CCCCCeEEeccCChhhccCCcEEEEEEEeeeEcCCcEEEEccCCc
Confidence 999999999999876421 122356777521 1123333322212234679999999999886 777 999999886
Q ss_pred ecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEE
Q psy7036 152 QVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATIS 203 (254)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~ 203 (254)
.+..... ......+.+...+.|. ....+| |.|+|.|.|..+.......
T Consensus 164 ~~~~~~~-~~~~~~g~~~~~s~L~--~~~~~~-g~ytC~v~n~~~~~~~~~~ 211 (215)
T 1c5d_H 164 SSDVHTF-PAVLQSGLYTLTSSVT--SSTWPS-QTVTCNVAHPASSTKVDKK 211 (215)
T ss_dssp CCSCCBC-CCEEETTEEEEEEEEE--ESSTTT-SCCEEEEEEGGGTEEEEEE
T ss_pred cCceEec-CcccCCCCEEEEEEEe--cccCCC-CeEEEEEEeCCCCccEEEe
Confidence 5432111 1111121111222344 444456 9999999998887655443
No 222
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.86 E-value=2e-20 Score=139.17 Aligned_cols=178 Identities=13% Similarity=0.169 Sum_probs=112.7
Q ss_pred eCCCceeecCCCeEEEEEEEeeCC--CCceEEEeCC--E---Eee--------------eCCcceEEEeecCCcceEEEE
Q psy7036 13 QKPQLRQEDEGNRLIFECQLLCNP--KPDIVWFRGE--T---QLS--------------EDTRTVMKTTPIGTNKYLVAL 71 (254)
Q Consensus 13 ~~~~~~~v~~g~~v~l~C~~~~~~--~~~v~W~~~~--~---~~~--------------~~~~~~~~~~~~~~~~~~~~l 71 (254)
..|....+.+|++++|.|.+.+.+ .+.+.|||++ . .+. ...++.+.... .....+|
T Consensus 27 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~---~~~~~sL 103 (291)
T 2gki_A 27 QQSGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDK---SSSTAYM 103 (291)
T ss_dssp EECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEG---GGTEEEE
T ss_pred EcCCcEEecCCCCEEEEEeccCCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeC---CCCEEEE
Confidence 345678899999999999998765 5789999853 1 111 01222222111 1123489
Q ss_pred EEeccCCCCCeEEEEEEEcCC-Cc----eEEEEEEEEecc----------ccCCCCCccccCCCeeeecCCCeEEEEEEE
Q psy7036 72 ELDDVIETDAGLYKVKAKNKM-GE----VAASINLNFSRE----------QIDGLAPTFLKKPSIRQEDDGKRLLFECRI 136 (254)
Q Consensus 72 ~i~~~~~~d~G~Y~C~~~~~~-~~----~~~~~~l~v~~~----------~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~ 136 (254)
.|.+++.+|+|.|.|.+.+.. +. ......|.|... .....++.+...+....+.+|+.++|.|.+
T Consensus 104 ~I~~v~~~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~ 183 (291)
T 2gki_A 104 ELSSLTSEDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSPSSLAVSAGEKVTMSCKS 183 (291)
T ss_dssp EECSCCGGGCEEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECSCSEEEEETTSCEEEEEEE
T ss_pred EECcCCHHHCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcCCCEEEEcCCCcEEEEEEc
Confidence 999999999999999999864 21 112346666530 000012333344556678899999999999
Q ss_pred eeCCCC------eEEEEECC--Eec---ccC-------CcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCC
Q psy7036 137 QADPAP------TVIWSHSG--VQV---KED-------KRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNEL 195 (254)
Q Consensus 137 ~~~~~~------~~~W~~~~--~~~---~~~-------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~ 195 (254)
.+.+.+ .+.|+|+. ... ... ...++....++ ....|.|.+++.+|+|.|.|.+.|..
T Consensus 184 ~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~--~~~~L~I~~v~~~DsG~Y~C~a~~~~ 258 (291)
T 2gki_A 184 SQSLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSG--TDFTLTISSVQAEDLAVYYCKQSYYH 258 (291)
T ss_dssp SSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET--TEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred CCccccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecC--CEEEEEECCCCHHHCEEEEEEEccCC
Confidence 888765 89999963 211 100 01112111111 12379999999999999999999854
No 223
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.86 E-value=1.5e-20 Score=133.79 Aligned_cols=183 Identities=12% Similarity=0.131 Sum_probs=107.1
Q ss_pred eCCCceeecCCCeEEEEEEEeeC--CCCceEEEeCC--E---Ee-ee----------CCcceEEEeecCCcceEEEEEEe
Q psy7036 13 QKPQLRQEDEGNRLIFECQLLCN--PKPDIVWFRGE--T---QL-SE----------DTRTVMKTTPIGTNKYLVALELD 74 (254)
Q Consensus 13 ~~~~~~~v~~g~~v~l~C~~~~~--~~~~v~W~~~~--~---~~-~~----------~~~~~~~~~~~~~~~~~~~l~i~ 74 (254)
..|....+.+|++|+|.|.+.+. +.+.+.|||.. . .+ .. ....++.... ......|.|.
T Consensus 4 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~---~~~~~~L~I~ 80 (215)
T 3nl4_H 4 EESGGRLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISK---TSTTVDLKIT 80 (215)
T ss_dssp EEECCCEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEE---CSSEEEEEES
T ss_pred EcCCCEEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEe---eCCEEEEEEC
Confidence 45567789999999999999763 36789999732 1 11 00 0111222221 2234479999
Q ss_pred ccCCCCCeEEEEEEEcCCCc----eEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCC--CeEEEEE
Q psy7036 75 DVIETDAGLYKVKAKNKMGE----VAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPA--PTVIWSH 148 (254)
Q Consensus 75 ~~~~~d~G~Y~C~~~~~~~~----~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~--~~~~W~~ 148 (254)
+++.+|+|.|.|.+.+..+. ......|.|... ...+|.+........+..|+.++|.|.+.+.++ ..+.|++
T Consensus 81 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~--~~~~P~i~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~~ 158 (215)
T 3nl4_H 81 SPTTEDTATYFCVRKYGSEWGGDLWGPGTLVTVSSG--QPKAPSVFPLAPCCGDTPSSTVTLGCLVKGYLPEPVTVTWNS 158 (215)
T ss_dssp SCCGGGCEEEEEEEECSSSSCEEEECCCEEEEECSS--CCBCCEEEEECCCTTCCC--CEEEEEEEEEEBSSCCEEEEGG
T ss_pred CCCcccCEEEEEEEecCCCccceEEcCCEEEEEeCC--CcCCCEEEEecCCccccCCCcEEEEEEEeeeeCCCeEEEEee
Confidence 99999999999999987542 223445666421 112343332222224557999999999988643 3588999
Q ss_pred CCEecccCCcceEEEcCCCC-ceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEE
Q psy7036 149 SGVQVKEDKRHKFSIDKDGH-SYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLN 205 (254)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~ 205 (254)
++..+........ ...++. ...+.+ .+...| |.|+|.|.|..+.......+.
T Consensus 159 ~g~~~~~~~~~~~-~~~~g~~~~~s~l---~v~~~d-g~ytC~v~~~~~~~~~~~~l~ 211 (215)
T 3nl4_H 159 GTLTNGVRTFPSV-RQSSGLYSLSSVV---SVTSSS-QPVTCNVAHPATNTKVDKTVA 211 (215)
T ss_dssp GTBCTTEEECCCE-ECTTSCEEEEEEE---EECC----CCEEEEEEGGGTEEEEEECC
T ss_pred CCEECCeEecCce-ECCCCCEEEEEEE---EEeccC-CEEEEEEEeCCCCcceEEecC
Confidence 9875532222122 222232 111223 345556 999999999888766555543
No 224
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.86 E-value=5e-21 Score=141.67 Aligned_cols=190 Identities=15% Similarity=0.212 Sum_probs=120.1
Q ss_pred CCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCC--E---Eee---e---------CCcceEEEeecCCcceEEE
Q psy7036 8 APSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGE--T---QLS---E---------DTRTVMKTTPIGTNKYLVA 70 (254)
Q Consensus 8 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~--~---~~~---~---------~~~~~~~~~~~~~~~~~~~ 70 (254)
.+.+.+.|..+.+.+|++++|.|.+.+.+.+.+.|||++ . .+. . ....++....+ ....++
T Consensus 24 ~~~v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~--~~~~~s 101 (279)
T 2wbj_D 24 GAVVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHA--SLTLST 101 (279)
T ss_dssp CCCEEEECSEEEEETTSCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEEC--SSSEEE
T ss_pred cceEEeCCCeEEecCCCeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeC--CCCEEE
Confidence 567788888899999999999999987788899999863 1 110 0 00112222211 123458
Q ss_pred EEEeccCCCCCeEEEEEEEcCCC----c--eEEEEEEEEeccccCCCCCccccC-CCeeeecCCCeEEEEEEEeeC-CC-
Q psy7036 71 LELDDVIETDAGLYKVKAKNKMG----E--VAASINLNFSREQIDGLAPTFLKK-PSIRQEDDGKRLLFECRIQAD-PA- 141 (254)
Q Consensus 71 l~i~~~~~~d~G~Y~C~~~~~~~----~--~~~~~~l~v~~~~~~~~~~~~~~~-~~~~~~~~g~~~~l~C~~~~~-~~- 141 (254)
|.|.+++.+|+|.|+|.+.+..+ . ......|.|........+|.+... +....+..|+.+.|.|.+.+. |.
T Consensus 102 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~ 181 (279)
T 2wbj_D 102 LTVTSAHPEDSSFYICSARDLTSGANNEQFFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDH 181 (279)
T ss_dssp EEESSCCGGGCEEEEEEEEETTCBTSCCEEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSCCEEEEEEEEEBSSC
T ss_pred EEEccCCccCCEEEEEEEcccccCCccceeeCCCEEEEEecCCCCCCCCEEEEECCCcccccCCCceEEEEEEeeEcCCC
Confidence 99999999999999999998421 1 122345666532111123433221 222223468899999999986 43
Q ss_pred CeEEEEECCEecccCCcce--EEE----cCCC-CceeeEEEEccCCCCC-ceeEEEEEEcCCCcce
Q psy7036 142 PTVIWSHSGVQVKEDKRHK--FSI----DKDG-HSYFASLEIIDVTIED-AGKYKVTAKNELGESN 199 (254)
Q Consensus 142 ~~~~W~~~~~~~~~~~~~~--~~~----~~~~-~~~~~~l~i~~~~~~d-~G~y~C~~~~~~~~~~ 199 (254)
+.+.|++++..+....... ... ..++ +...+.|.|......| .|.|+|.|.|......
T Consensus 182 ~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~~~YtC~v~n~~~~~~ 247 (279)
T 2wbj_D 182 VELSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 247 (279)
T ss_dssp EEEEEEETTEECCTTEEECSSCEESSTTSTTCCEEEEEEEECCSTTTTCTTCEEEEEEEECCBCTT
T ss_pred cEEEEEECCEECCCCcccccccccccccCCCCcEEEEEEEEEChHHhccCCCEEEEEEEeCCCCCC
Confidence 5899999998875432110 000 1222 2334568888777654 6789999999866544
No 225
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.85 E-value=3.3e-20 Score=137.31 Aligned_cols=180 Identities=16% Similarity=0.241 Sum_probs=112.8
Q ss_pred CeeEeCCCceeecCCCeEEEEEEEeeC--CCCceEEEeCC--EE---e-ee-------------CCcceEEEeecCCcce
Q psy7036 9 PSFTQKPQLRQEDEGNRLIFECQLLCN--PKPDIVWFRGE--TQ---L-SE-------------DTRTVMKTTPIGTNKY 67 (254)
Q Consensus 9 p~~~~~~~~~~v~~g~~v~l~C~~~~~--~~~~v~W~~~~--~~---~-~~-------------~~~~~~~~~~~~~~~~ 67 (254)
+.+.+ |....+.+|++|+|.|.+.+. +.+.+.|||.. .. + .. ..++.+... ....
T Consensus 2 ~~v~q-p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~---~~~~ 77 (280)
T 3fku_X 2 VQLVQ-SGAEVKKPGSSVKVSCTSSEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITAD---QSTR 77 (280)
T ss_dssp CCEEC-CCCCEECTTCCEEEEEEECCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEE---TTTT
T ss_pred CeEEc-CCCEEECCCCcEEEEEEeeccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEe---CCCC
Confidence 34555 778899999999999999764 56789999742 11 0 00 112222211 1222
Q ss_pred EEEEEEeccCCCCCeEEEEEEEcC---------CCceEEEEEEEEecccc---------CCCCCccccCCCeeeecCCCe
Q psy7036 68 LVALELDDVIETDAGLYKVKAKNK---------MGEVAASINLNFSREQI---------DGLAPTFLKKPSIRQEDDGKR 129 (254)
Q Consensus 68 ~~~l~i~~~~~~d~G~Y~C~~~~~---------~~~~~~~~~l~v~~~~~---------~~~~~~~~~~~~~~~~~~g~~ 129 (254)
..+|.|.+++.+|+|.|.|.+.+. .........|.|..... ...++.+...+. ..+.+|+.
T Consensus 78 ~~sL~I~~v~~~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~~p~-~~v~~G~~ 156 (280)
T 3fku_X 78 TAYMDLRSLRSEDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQPPS-VSKGLRQT 156 (280)
T ss_dssp EEEEEECSCCSTTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBCCSE-EEECTTCC
T ss_pred EEEEEECCCChhhCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEeCCc-EEEecCCC
Confidence 358999999999999999999886 11122344566643000 012333444444 78889999
Q ss_pred EEEEEEEee-CC-CCeEEEEECC--Eeccc----------CCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCC
Q psy7036 130 LLFECRIQA-DP-APTVIWSHSG--VQVKE----------DKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNEL 195 (254)
Q Consensus 130 ~~l~C~~~~-~~-~~~~~W~~~~--~~~~~----------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~ 195 (254)
++|.|.+.+ .+ .+.+.|+|.. ..+.. ....++....++. ...|.|.+++.+|+|.|.|.+.+..
T Consensus 157 v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~--~~~L~I~~v~~~DsG~Y~C~~~~~~ 234 (280)
T 3fku_X 157 ATLTCTGNSNNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGN--TASLTITGLQPEDEADYYCSTWDSS 234 (280)
T ss_dssp EEEEEECCCCCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETT--EEEEEECSCCGGGCSEEEEEEEETT
T ss_pred EEEEEEecCCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCC--EEEEEECCCCHHHCEEEEEEEecCC
Confidence 999999887 33 3789999832 21110 0011122221111 2369999999999999999999876
No 226
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.85 E-value=1.1e-20 Score=117.47 Aligned_cols=96 Identities=24% Similarity=0.470 Sum_probs=82.0
Q ss_pred CCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEE
Q psy7036 6 DFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYK 85 (254)
Q Consensus 6 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 85 (254)
+.+|.|...|....+.+|+++.|.|.+.|.|.+.++|+|+|..+......++.....+ ..+.|.|.+++.+|+|.|+
T Consensus 3 ~~PP~i~~~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~---~~~~L~I~~~~~~D~G~Y~ 79 (100)
T 3knb_A 3 GIPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTD---DLTTLIIMDVQKQDGGLYT 79 (100)
T ss_dssp CEEEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECS---SEEEEEESSCCGGGCEEEE
T ss_pred CCCCEEEeCCCcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeeccc---ceEEEEEcCCCccCCEEEE
Confidence 4579999999999999999999999999999999999999999976655444433332 2347999999999999999
Q ss_pred EEEEcCCCceEEEEEEEEe
Q psy7036 86 VKAKNKMGEVAASINLNFS 104 (254)
Q Consensus 86 C~~~~~~~~~~~~~~l~v~ 104 (254)
|.+.|..|.....+.|.|.
T Consensus 80 C~a~N~~G~~~~~~~l~V~ 98 (100)
T 3knb_A 80 LSLGNEFGSDSATVNIHIR 98 (100)
T ss_dssp EEEEETTEEEEEEEEEEEE
T ss_pred EEEEECCCEEEEEEEEEEE
Confidence 9999999998888888885
No 227
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.85 E-value=9.2e-21 Score=119.13 Aligned_cols=95 Identities=27% Similarity=0.449 Sum_probs=82.5
Q ss_pred CCCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEE
Q psy7036 5 EDFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLY 84 (254)
Q Consensus 5 ~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 84 (254)
.+.+|.|+..|.+..+.+|+++.|.|.+.|.|.+.++|+|+|..+....++.+... ...+.|.|.+++..|+|.|
T Consensus 10 ~~~pP~f~~~p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~~~~~~~~~-----~~~~~L~I~~v~~~D~G~Y 84 (107)
T 3knb_B 10 QGSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPAD-----GAEHGLLLTAALPTDAGVY 84 (107)
T ss_dssp CCEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEE-----TTEEEEEESSCCGGGCEEE
T ss_pred CCCCCEEEeCCCcEEEeCCCcEEEEEEEEEecCCEEEEEECcccccceeeEEEeec-----CceEEEEEecCChhhCEEE
Confidence 34589999999999999999999999999999999999999999987766554322 1234799999999999999
Q ss_pred EEEEEcCCCceEEEEEEEEe
Q psy7036 85 KVKAKNKMGEVAASINLNFS 104 (254)
Q Consensus 85 ~C~~~~~~~~~~~~~~l~v~ 104 (254)
+|.+.|..|.....+.|.|.
T Consensus 85 ~C~a~N~~G~~~~~~~l~V~ 104 (107)
T 3knb_B 85 VCRARNAAGEAYAAAAVTVL 104 (107)
T ss_dssp EEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEECCCEEEEEEEEEEE
Confidence 99999999998888888886
No 228
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.85 E-value=7.8e-21 Score=140.04 Aligned_cols=190 Identities=13% Similarity=0.193 Sum_probs=118.3
Q ss_pred CCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeC--CEE---e-eeCCc---------c-eEEEeecCCcceEEEE
Q psy7036 8 APSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRG--ETQ---L-SEDTR---------T-VMKTTPIGTNKYLVAL 71 (254)
Q Consensus 8 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~--~~~---~-~~~~~---------~-~~~~~~~~~~~~~~~l 71 (254)
...+...|..+.+.+|++++|.|.+.+ +.+.+.|||. +.. + ..... . ++.... ......+|
T Consensus 27 ~~~v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~sL 103 (270)
T 3qib_D 27 GMKVIQTPRYLVKGQGQKAKMRCIPEK-GHPVVFWYQQNKNNEFKFLINFQNQEVLQQIDMTEKRFSAEC--PSNSPCSL 103 (270)
T ss_dssp -CCCEEECSEEEEETTSCEEEEEECCT-TCCEEEEEEECTTCCEEEEEEEETTEEEEECHHHHHHEEEEC--CTTSCEEE
T ss_pred ceeEEeCCCeEEEcCCCCEEEEEEecC-CCceEEEEEECCCCCcEEEEEECCCCceecCCccCCcEEEEe--CCCcEEEE
Confidence 456777888889999999999999864 6788999982 211 1 00000 0 122111 12334589
Q ss_pred EEeccCCCCCeEEEEEEEcCCC----ceEEEEEEEEeccccCCCCCcccc-CCCeeeecCCCeEEEEEEEee-CCCC-eE
Q psy7036 72 ELDDVIETDAGLYKVKAKNKMG----EVAASINLNFSREQIDGLAPTFLK-KPSIRQEDDGKRLLFECRIQA-DPAP-TV 144 (254)
Q Consensus 72 ~i~~~~~~d~G~Y~C~~~~~~~----~~~~~~~l~v~~~~~~~~~~~~~~-~~~~~~~~~g~~~~l~C~~~~-~~~~-~~ 144 (254)
.|.+++.+|+|.|.|.+.+... .......|.|........+|.+.. .+....+..|+.++|.|.+.+ .|.+ .+
T Consensus 104 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v 183 (270)
T 3qib_D 104 EIQSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVEL 183 (270)
T ss_dssp EESSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEE
T ss_pred EECCCCHhHCeEEEEEEecCCCccceEECCcEEEEEccccccccCCceEEECCCccccccCCceEEEEEecceeCCCeEE
Confidence 9999999999999999986421 222344566653211112333221 222223445899999999988 5656 79
Q ss_pred EEEECCEecccCCcceE------EEcCCC-CceeeEEEEccCCCCC-ceeEEEEEEcCCCcceE
Q psy7036 145 IWSHSGVQVKEDKRHKF------SIDKDG-HSYFASLEIIDVTIED-AGKYKVTAKNELGESNA 200 (254)
Q Consensus 145 ~W~~~~~~~~~~~~~~~------~~~~~~-~~~~~~l~i~~~~~~d-~G~y~C~~~~~~~~~~~ 200 (254)
.|+++|..+........ ....++ +...+.|.|.....+| .|.|+|.+.|.......
T Consensus 184 ~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~l~~~~ 247 (270)
T 3qib_D 184 SWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSEND 247 (270)
T ss_dssp EEEETTEEECTTEEECSSCEESCTTSSSCCEEEEEEEEEEHHHHHSTTCEEEEEEEECCBCTTS
T ss_pred EEEECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEecCCCCcc
Confidence 99999988864321100 000122 2334578888887777 99999999998665443
No 229
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.84 E-value=9.1e-20 Score=131.80 Aligned_cols=184 Identities=13% Similarity=0.214 Sum_probs=113.5
Q ss_pred eEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCC--E---Eee---e---------CCcceEEEeecCCcceEEEEEE
Q psy7036 11 FTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGE--T---QLS---E---------DTRTVMKTTPIGTNKYLVALEL 73 (254)
Q Consensus 11 ~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~--~---~~~---~---------~~~~~~~~~~~~~~~~~~~l~i 73 (254)
+++.|..+.+.+|++|+|.|.+. .+.+.+.|||++ . .+. . ..++.+. .. ....++|.|
T Consensus 2 v~q~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~--~~--~~~~~~L~I 76 (238)
T 1bec_A 2 VTQSPRNKVAVTGGKVTLSCQQT-NNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKAS--RP--SQEQFSLIL 76 (238)
T ss_dssp EEEECSEEEEETTCCEEEEEEES-SCCSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEE--CC--SSSEEEEEE
T ss_pred cccCCCeeEEeCCCcEEEEEEeC-CCCceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEE--ec--CCCEEEEEE
Confidence 45678888999999999999985 467889999853 1 110 0 1122211 11 123458999
Q ss_pred eccCCCCCeEEEEEEEcCCC---c--eEEEEEEEEeccccCCCCCcccc-CCCeeeecCCCeEEEEEEEeeC-CCC-eEE
Q psy7036 74 DDVIETDAGLYKVKAKNKMG---E--VAASINLNFSREQIDGLAPTFLK-KPSIRQEDDGKRLLFECRIQAD-PAP-TVI 145 (254)
Q Consensus 74 ~~~~~~d~G~Y~C~~~~~~~---~--~~~~~~l~v~~~~~~~~~~~~~~-~~~~~~~~~g~~~~l~C~~~~~-~~~-~~~ 145 (254)
.+++.+|+|.|.|.+.+..+ . ......|.|........+|.+.. .+....+..|+.+.|.|.+.+. |.+ .+.
T Consensus 77 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~ 156 (238)
T 1bec_A 77 ELATPSQTSVYFCASGGGRGSYAEQFFGPGTRLTVLEDLRQVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELS 156 (238)
T ss_dssp SSCCGGGCEEEEEEEESCTTCGGGCEECCCEEEEEESCGGGCBCCEEEEECCCSTTCSSSCSCSEEEEEEEEBSCCEEEE
T ss_pred ecCCcccCEEEEEEEecCCCCccccccCCCEEEEEeccCCCCCCCceEEECCChHHcccCCceEEEEEEeeEeCCCcEEE
Confidence 99999999999999998642 1 11234566653211112444332 2233345578999999999986 654 899
Q ss_pred EEECCEecccCCcc--eEEEcCCCC-ceeeEEEEccCCCCC-ceeEEEEEEcCCCcce
Q psy7036 146 WSHSGVQVKEDKRH--KFSIDKDGH-SYFASLEIIDVTIED-AGKYKVTAKNELGESN 199 (254)
Q Consensus 146 W~~~~~~~~~~~~~--~~~~~~~~~-~~~~~l~i~~~~~~d-~G~y~C~~~~~~~~~~ 199 (254)
|++++..+...... ......++. ...+.|.|......| .|.|+|.|.|......
T Consensus 157 W~~~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l~~~ 214 (238)
T 1bec_A 157 WWVNGKEVHSGVSTDPQAYKESNYSYCLSSRLRVSATFWHNPRNHFRCQVQFHGLSEE 214 (238)
T ss_dssp EEETTEEECTTEEECSSCEEEETTEEEEEEEECCCHHHHTCTTCEEEEEEEECCCCTT
T ss_pred EEECCEECCCceecccceEeCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEcCCCCCC
Confidence 99999887543211 111122221 223445555444444 6789999999754433
No 230
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.84 E-value=1.2e-20 Score=135.86 Aligned_cols=189 Identities=14% Similarity=0.192 Sum_probs=115.6
Q ss_pred CCeeEeCCCcee-ecCCCeEEEEEEEeeCC----CCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCe
Q psy7036 8 APSFTQKPQLRQ-EDEGNRLIFECQLLCNP----KPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAG 82 (254)
Q Consensus 8 ~p~~~~~~~~~~-v~~g~~v~l~C~~~~~~----~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G 82 (254)
++.++..|.... +..|+.++|.|.+.|.. ...|+|+|+|..+............++.....+.|.|......|.|
T Consensus 23 P~v~i~~ps~~~~l~~g~~~~L~C~v~g~~p~P~~i~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~ 102 (240)
T 4acp_A 23 PSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGK 102 (240)
T ss_dssp CEEEEECCCHHHHHSSSSCCEEEEEEESCCC--CCCEEEEEETTEEECCCEECCCEEC---CEEEEEEEECCHHHHHHTC
T ss_pred CEEEEECcChHHhcccCCCcEEEEEEeccccCCCccEEEEEECCcccCCceeccceECCCCeEEEEEEEEEechhccCCC
Confidence 334555666555 66799999999998853 3479999999988543222221222233334457888888888899
Q ss_pred EEEEEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeC-CCC-eEEEEECCEecccCCcce
Q psy7036 83 LYKVKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQAD-PAP-TVIWSHSGVQVKEDKRHK 160 (254)
Q Consensus 83 ~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~-~~~W~~~~~~~~~~~~~~ 160 (254)
.|+|.+.+..+.......+.... ....+|.+...........|+.+.|.|.+.++ |.+ .+.|++++..+.......
T Consensus 103 ~YtC~v~h~~~~~~~~~~i~~~~--~~~~~P~V~v~~~~~~~~~g~~~~L~C~~~gf~P~~i~v~W~k~g~~~~~~~~~~ 180 (240)
T 4acp_A 103 EYKCKVSNKALPAPIEKTISKAK--GQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKATP 180 (240)
T ss_dssp CEEEEEECC----CEEEEECCCC--SCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECC
T ss_pred EEEEEEEcCCCCccccccccccC--CCCCCCEEEEECCChHHhcCCceEEEEEEeEEeCCCcEEEEEECCEECCCcCccC
Confidence 99999998776422222222100 11234444333222222348899999999984 543 799999998864332222
Q ss_pred EEEcCCCC-ceeeEEEEccCCCCCceeEEEEEEcCCCcc
Q psy7036 161 FSIDKDGH-SYFASLEIIDVTIEDAGKYKVTAKNELGES 198 (254)
Q Consensus 161 ~~~~~~~~-~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~ 198 (254)
.....++. ...+.|.|.....++.|.|+|.|.+.....
T Consensus 181 ~~~~~dgt~~~~s~L~v~~~~~~~~~~ytC~V~h~~l~~ 219 (240)
T 4acp_A 181 PVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHN 219 (240)
T ss_dssp CEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSGG
T ss_pred ceECCCCCEEEEEEEEEChHHhCCCCEEEEEEEECCCCC
Confidence 22333332 334677777666678899999999976543
No 231
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.84 E-value=9.7e-20 Score=140.20 Aligned_cols=184 Identities=11% Similarity=0.129 Sum_probs=118.6
Q ss_pred EeCCCcee-ecCCCeEEEEEEEeeC---CC-CceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEE
Q psy7036 12 TQKPQLRQ-EDEGNRLIFECQLLCN---PK-PDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKV 86 (254)
Q Consensus 12 ~~~~~~~~-v~~g~~v~l~C~~~~~---~~-~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 86 (254)
+..+.... +.+|++++|.|.+.+. |. ..|+|+|++..+.............+.....+.|.|.+++.+|+|.|+|
T Consensus 171 ~~~p~~~~~~~~g~~v~L~C~~~g~~P~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C 250 (376)
T 2aty_A 171 IFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKC 250 (376)
T ss_pred EeCcCHHHceeeCCeeEEEEEEeccccCCCccEEEEEECCccccCcccCCCCcccCCcEEEEEEEEechHhccCCCEEEE
Confidence 44555444 7899999999999876 32 3699999986653222111111122223344579999999999999999
Q ss_pred EEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCC--CCeEEEEECCEecccCCcceEEEc
Q psy7036 87 KAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADP--APTVIWSHSGVQVKEDKRHKFSID 164 (254)
Q Consensus 87 ~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~--~~~~~W~~~~~~~~~~~~~~~~~~ 164 (254)
.+.+..+.......+.+.. ....+|.+...+.......|+.++|.|.+.+++ .+.+.|+|++..+...........
T Consensus 251 ~~~~~~~~~~~~~~v~~~~--~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~ 328 (376)
T 2aty_A 251 RVNSAAFPAPIEKTISKTK--GRPKAPQLYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQWNGQPAENYKNTQPIMN 328 (376)
T ss_pred EEecCCCCCceEEEEcCCC--CCCcCCeEEeeCCCHHHhcCCceEEEEEEEEeECCCcEEEEEECCEECCCeEeCCceEC
Confidence 9998776433322332210 112455544444433344588999999999864 457999999988754332222223
Q ss_pred CCCC-ceeeEEEEccCCCCCceeEEEEEEcCCCc
Q psy7036 165 KDGH-SYFASLEIIDVTIEDAGKYKVTAKNELGE 197 (254)
Q Consensus 165 ~~~~-~~~~~l~i~~~~~~d~G~y~C~~~~~~~~ 197 (254)
.++. ...+.|.|.....+|.|.|+|.|.|....
T Consensus 329 ~dgty~~~s~L~i~~~~~~~~~~YtC~v~h~~l~ 362 (376)
T 2aty_A 329 TNESYFVYSKLNVQKSNWEAGNTFTCSVLHEGLH 362 (376)
T ss_pred CCCCEEEEEEEEEcHHHhCCCCcEEEEEEeCCCC
Confidence 3332 44567888877778899999999997654
No 232
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.84 E-value=8.1e-20 Score=131.32 Aligned_cols=192 Identities=15% Similarity=0.197 Sum_probs=116.2
Q ss_pred eeEeCCCceeecCCCeEEEEEEEeeC--CCCceEEEeCC-----EEe-eeC----------CcceEEEeecCCcceEEEE
Q psy7036 10 SFTQKPQLRQEDEGNRLIFECQLLCN--PKPDIVWFRGE-----TQL-SED----------TRTVMKTTPIGTNKYLVAL 71 (254)
Q Consensus 10 ~~~~~~~~~~v~~g~~v~l~C~~~~~--~~~~v~W~~~~-----~~~-~~~----------~~~~~~~~~~~~~~~~~~l 71 (254)
.+.+.|..+.+.+|++|+|.|.+.+. +...+.|||.. ..+ ... ...++....+ .......|
T Consensus 3 ~v~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~~L 81 (230)
T 1ypz_F 3 KLEQPEISISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKN-PSASTSIL 81 (230)
T ss_dssp SEECSCSEEEEETTSCEEEEEEECCGGGGGCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEEC-CTTTEEEE
T ss_pred cccccCCEEEEeCCCcEEEEEEeeccccCccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEc-CCCCEEEE
Confidence 35667888899999999999999764 56789999842 111 100 1122222211 12234589
Q ss_pred EEeccCCCCCeEEEEEEEcC--CCc--eEEEEEEEEeccccC---CCCCcc-ccCCCeeeecCCCeEEEEEEEeeC-CC-
Q psy7036 72 ELDDVIETDAGLYKVKAKNK--MGE--VAASINLNFSREQID---GLAPTF-LKKPSIRQEDDGKRLLFECRIQAD-PA- 141 (254)
Q Consensus 72 ~i~~~~~~d~G~Y~C~~~~~--~~~--~~~~~~l~v~~~~~~---~~~~~~-~~~~~~~~~~~g~~~~l~C~~~~~-~~- 141 (254)
.|.+++.+|+|.|.|.+.+. ... ......|.|...... ..+|.. ...+....+..|+.++|.|.+.+. |.
T Consensus 82 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~l~~~~~p~~~v~~p~~~~v~~g~~~~L~C~~~g~~P~~ 161 (230)
T 1ypz_F 82 TIYSLEEEDEAIYYCSYGEGSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEAFFPDV 161 (230)
T ss_dssp EECSCCGGGCSEEEEEECCTTTCCCCEECSCEEEEEECCCTTCCSCCSCCCCEECCCHHHHHHHSCEEEEEEEEEESSCC
T ss_pred EECcCChhhCEEEEEEEECCCCCcccccCCCEEEEEecccccCcccCCCCceEECCCchhhccCCcceEEEEEeeecCCC
Confidence 99999999999999999874 111 112346676521000 011211 111222334458889999999886 65
Q ss_pred CeEEEEE-CCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEE
Q psy7036 142 PTVIWSH-SGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISL 204 (254)
Q Consensus 142 ~~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~ 204 (254)
+.+.|++ ++..+..............+...+.|.|..... + |.|+|.+.|..+....+..+
T Consensus 162 ~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-~~ytC~v~~~~~~~~~~~~~ 223 (230)
T 1ypz_F 162 IRVYWKEKDGNTILDSQEGDTLKTNDTYMKFSWLTVPERAM-G-KEHRCIVKHENNKGGADQAI 223 (230)
T ss_dssp CEEEEECTTSSCBCCCEECCCEEETTEEEEEEEEEECGGGT-T-SCEEEEEECSSCTTTSCEEE
T ss_pred eEEEEEccCCeEccccccceeecCCCCEEEEEEEEEEhhhC-C-CEEEEEEEECCCCCceeEee
Confidence 5899999 776664322111111122223346788887765 4 89999999987765544444
No 233
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.84 E-value=1.3e-20 Score=143.64 Aligned_cols=193 Identities=14% Similarity=0.194 Sum_probs=116.8
Q ss_pred CCCeeEeCCCceeecCCCeEEEEEEEeeC-CC-CceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEE
Q psy7036 7 FAPSFTQKPQLRQEDEGNRLIFECQLLCN-PK-PDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLY 84 (254)
Q Consensus 7 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~-~~-~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 84 (254)
.+|.+...+....+.+|+.++|.|.+.|. |. +.++|++++..+........ ....+.....+.|.|.++..+| |.|
T Consensus 119 ~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~-~~~~~~~~~~s~L~i~~~~~~d-G~Y 196 (344)
T 1za6_B 119 KGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAV-LQSSGLYSLSSVVTVPSSSLGT-QTY 196 (344)
T ss_dssp BCCEEEEECCSCTTTSSSEEEEEEEEEEEBSSCCCEEETTTTBCTTEEECCCE-ECTTSCEEEEEEEEEETTHHHH-BCE
T ss_pred CCCeEEEccccccccCCCcEEEEEEEeeEECCCeEEEEecCCccCceeECCCe-ECCCCCEEEEEEEEEcHHHcCC-CcE
Confidence 34555544434456799999999999885 64 79999999875321100000 1111222233479999988888 999
Q ss_pred EEEEEcCCCceEEEEEEEEec------------------cccCCCCCccccCCCeeeecCCCeEEEEEEEeeC-C-CCeE
Q psy7036 85 KVKAKNKMGEVAASINLNFSR------------------EQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQAD-P-APTV 144 (254)
Q Consensus 85 ~C~~~~~~~~~~~~~~l~v~~------------------~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-~-~~~~ 144 (254)
+|.+.|..+.......+.+.. ......+|.+...........|..+.|.|.+.+. | .+.+
T Consensus 197 ~C~a~n~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v 276 (344)
T 1za6_B 197 ICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCGGGSSGGGSGGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAV 276 (344)
T ss_dssp EEEEEEGGGTEEEEEEECCCCC--------------------CCBCCEEEEECCCGGGGGSSSEEEEEEEEEEBSSCCEE
T ss_pred EEEEEeCCCCccceEeecccccccccccCCCCCCccccccCCCCcCCEEEEeCCChHhccCCcEEEEEEEeeEECCCeEE
Confidence 999999887643333322100 0001133433222211112246669999999985 4 3589
Q ss_pred EEEECCEecccCCcceEEEcCCCC-ceeeEEEEccCCCCCceeEEEEEEcCCCcceEE
Q psy7036 145 IWSHSGVQVKEDKRHKFSIDKDGH-SYFASLEIIDVTIEDAGKYKVTAKNELGESNAT 201 (254)
Q Consensus 145 ~W~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~ 201 (254)
.|+++|..+............++. ...+.|.|.....+|.|.|+|.|.|........
T Consensus 277 ~W~k~g~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~~~~l~~~~~ 334 (344)
T 1za6_B 277 EWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYT 334 (344)
T ss_dssp EEESSSSCCCSEEECCCEECTTSCEEEEEEEEECHHHHHTTCEEEEEEECTTSTTSEE
T ss_pred EEEECCeECCCcEecceEECCCCcEEEEEEEEEChHHccCCCeEEEEEEcCCCCCCee
Confidence 999999887543322233333432 334567777777778999999999987654443
No 234
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.84 E-value=5.3e-20 Score=134.25 Aligned_cols=184 Identities=13% Similarity=0.176 Sum_probs=112.5
Q ss_pred eEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeC--CE---Ee-eeCCc---------c-eEEEeecCCcceEEEEEEe
Q psy7036 11 FTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRG--ET---QL-SEDTR---------T-VMKTTPIGTNKYLVALELD 74 (254)
Q Consensus 11 ~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~--~~---~~-~~~~~---------~-~~~~~~~~~~~~~~~l~i~ 74 (254)
+.+.|..+.+.+|++|+|.|.+.+.+.+.+.|||. +. .+ ..... . ++......... |.|.
T Consensus 4 v~q~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~----L~I~ 79 (253)
T 3to4_D 4 LEQNPRWRLVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTE----LRLQ 79 (253)
T ss_dssp CEEECSEEEEESSCCEEEEEECSCTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSC----CEEE
T ss_pred EEeCCCeEEEeCCCcEEEEEEeCCCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCe----EEEc
Confidence 45667788899999999999988788889999982 11 11 10000 0 22211111111 9999
Q ss_pred ccCCCCCeEEEEEEEcCCC------ceEEEEEEEEeccccCCCCCcccc-CCCeeeecCCCeEEEEEEEee-CCCC-eEE
Q psy7036 75 DVIETDAGLYKVKAKNKMG------EVAASINLNFSREQIDGLAPTFLK-KPSIRQEDDGKRLLFECRIQA-DPAP-TVI 145 (254)
Q Consensus 75 ~~~~~d~G~Y~C~~~~~~~------~~~~~~~l~v~~~~~~~~~~~~~~-~~~~~~~~~g~~~~l~C~~~~-~~~~-~~~ 145 (254)
+++.+|+|.|.|.+.+..+ .......|.|........+|.+.. .+....+..|..++|.|.+.+ .|.+ .+.
T Consensus 80 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~ 159 (253)
T 3to4_D 80 VANMSQGRTLYCTSSADHWTNTGQLYFGEGSKLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELS 159 (253)
T ss_dssp EESCSSCEEEEEEEECSCCSTTCCEEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEE
T ss_pred cCChhhCeEEEEEEecCCCCcccceEECCCEEEEEecCCCCCCCCeEEEeCCChhhcccCCceEEEEEEceEECCcEEEE
Confidence 9999999999999986543 112234566653111112333221 111122234689999999988 5666 799
Q ss_pred EEECCEecccCCcceE--EEc----CCC-CceeeEEEEccCCCCC-ceeEEEEEEcCCCcc
Q psy7036 146 WSHSGVQVKEDKRHKF--SID----KDG-HSYFASLEIIDVTIED-AGKYKVTAKNELGES 198 (254)
Q Consensus 146 W~~~~~~~~~~~~~~~--~~~----~~~-~~~~~~l~i~~~~~~d-~G~y~C~~~~~~~~~ 198 (254)
|+++|..+........ ... .++ +...+.|.|.....+| .|.|+|.|.|.....
T Consensus 160 W~k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~~~ytC~v~h~~l~~ 220 (253)
T 3to4_D 160 WWVNGKEVHSGVSTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSE 220 (253)
T ss_dssp EEETTEEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCT
T ss_pred EEECCEECCCceecccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEeCCCCC
Confidence 9999998754321110 000 122 2334678888877777 679999999976543
No 235
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.83 E-value=8.9e-20 Score=131.89 Aligned_cols=188 Identities=13% Similarity=0.195 Sum_probs=114.2
Q ss_pred CCCceeecCCCeEEEEEEEeeCC----CCceEEEeCC-----EEe---e------e--------CCcceEEEeecCCcce
Q psy7036 14 KPQLRQEDEGNRLIFECQLLCNP----KPDIVWFRGE-----TQL---S------E--------DTRTVMKTTPIGTNKY 67 (254)
Q Consensus 14 ~~~~~~v~~g~~v~l~C~~~~~~----~~~v~W~~~~-----~~~---~------~--------~~~~~~~~~~~~~~~~ 67 (254)
.|..+.+.+|++|+|.|.+.+.+ ...+.||+.. ..+ . . ....++....+. ...
T Consensus 6 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~-~~~ 84 (239)
T 3tv3_H 6 ESGPTLVEASETLSLTCAVSGDSTAACNSFWGWVRQPPGKGLEWVGSLSHCASYWNRGWTYHNPSLKSRLTLALDT-PKN 84 (239)
T ss_dssp EESCSEECTTSCEEEEEEEESSCTTSSSCEEEEEEECTTSCCEEEEEEECCCCTTSSCEEEECTTTGGGEEEEEEG-GGT
T ss_pred cCCCEEEcCCCCEEEEEEEcCCcccccceEEEEEEECCCCCcEEEEEEecccccccCCceecCccccCCEEEEEEC-CCC
Confidence 45567899999999999998654 3479999832 111 1 0 011122222111 123
Q ss_pred EEEEEEeccCCCCCeEEEEEEEcCCC-------------ceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEE
Q psy7036 68 LVALELDDVIETDAGLYKVKAKNKMG-------------EVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFEC 134 (254)
Q Consensus 68 ~~~l~i~~~~~~d~G~Y~C~~~~~~~-------------~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C 134 (254)
.+.|.|.+++.+|+|.|.|.+.+..+ .......|.|.. ....+|.+........+..|+.+.|.|
T Consensus 85 ~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~~--~~~~~P~v~~~~~~~~~~~g~~v~l~C 162 (239)
T 3tv3_H 85 LVFLKLNSVTAADTATYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSS--ASTKGPSVFPLAPSSKSTSGGTAALGC 162 (239)
T ss_dssp EEEEEECSCCGGGCEEEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEECC--CCCBCCEEEEECCCCCC--TTEEEEEE
T ss_pred EEEEEECCCChhhCEEEEEEEecCccccccccccccceeeeCCCcEEeecc--CCCcCCEEEEECCChhhccCCcEEEEE
Confidence 45799999999999999999986531 111233555542 111334433222333345699999999
Q ss_pred EEeeC-CCC-eEEEEECCEecccCCcceEEEcCCC-CceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEE
Q psy7036 135 RIQAD-PAP-TVIWSHSGVQVKEDKRHKFSIDKDG-HSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNF 206 (254)
Q Consensus 135 ~~~~~-~~~-~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v 206 (254)
.+.+. |.+ .+.|++++..+........ ...++ +...+.|.|.....+| |.|+|.|.|..+.......|.+
T Consensus 163 ~~~~~~p~~~~v~W~~~g~~~~~~~~~~~-~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~l~~ 235 (239)
T 3tv3_H 163 LVKDYFPEPVTVSWNSGALTSGVHTFPAV-LQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEP 235 (239)
T ss_dssp EEEEEBSSCCEEEEGGGTBCTTEEECCCE-ECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEECCC
T ss_pred EEeeEeCCCeEEEEEECCccCceEecCce-ECCCCCEEEEEEEEEchhhcCC-CEEEEEEEECCCCceEEEEecc
Confidence 99884 434 4889998865432211112 22222 2344678999888888 9999999998776655555443
No 236
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.83 E-value=4.3e-20 Score=133.03 Aligned_cols=189 Identities=11% Similarity=0.148 Sum_probs=111.0
Q ss_pred CCCceeecCCCeEEEEEEEeeC--CCCce--EEEeCC-----EEe-e---eCC----------cceEEEeecCCcceEEE
Q psy7036 14 KPQLRQEDEGNRLIFECQLLCN--PKPDI--VWFRGE-----TQL-S---EDT----------RTVMKTTPIGTNKYLVA 70 (254)
Q Consensus 14 ~~~~~~v~~g~~v~l~C~~~~~--~~~~v--~W~~~~-----~~~-~---~~~----------~~~~~~~~~~~~~~~~~ 70 (254)
.+....+.+|++|+|.|.+.+. ....+ .|||.. ..+ . ... ..++....+. .....+
T Consensus 6 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~i~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~-~~~~~s 84 (232)
T 3qhz_H 6 ESGPALVKPTQTLTLTCSFSGFSLSTSGMSVSWIRQPPGKALEWLALIDWDDDTYYITYSSSLKTRLTISKDT-SKSQVV 84 (232)
T ss_dssp EECCSEECTTSCEEEEEEEESCGGGCTTCEEEEEEECTTSCCEEEEEEESSSSCEEECCCTTTTTTEEEEEET-TTTEEE
T ss_pred cCCCEEECCCCcEEEEEEEeCcccccceeEeEEEEECCCCCcEEEEEEECCCCccccccCccccCceEEEecc-CCCEEE
Confidence 3445679999999999999753 22445 999832 111 0 000 1122222111 223457
Q ss_pred EEEeccCCCCCeEEEEEEEcCC--------CceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCC-
Q psy7036 71 LELDDVIETDAGLYKVKAKNKM--------GEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPA- 141 (254)
Q Consensus 71 l~i~~~~~~d~G~Y~C~~~~~~--------~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~- 141 (254)
|.|.+++.+|+|.|.|.+.+.. ........|.|... ...+|.+........+..|+.+.|.|.+.+.++
T Consensus 85 L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~--~~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~ 162 (232)
T 3qhz_H 85 LTMTNMDPVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSSA--STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPE 162 (232)
T ss_dssp EEECSCCGGGCEEEEEEEECCC---CCCCCCEECCCEEEEECSS--CCBCCEEEEECC-------CEEEEEEEEEEEBSS
T ss_pred EEECcCChhhCEEEEEEEeeccCccccccceeeCCCeEEEEecC--CCCCCEEEEecccccccCCCcEEEEEEEeeEeCC
Confidence 9999999999999999998652 11223345666421 113344332222234456999999999987543
Q ss_pred -CeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEE
Q psy7036 142 -PTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNF 206 (254)
Q Consensus 142 -~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v 206 (254)
..+.|++++..+..............+...+.|.|......| |.|+|.|.|..+.......|.+
T Consensus 163 ~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~ytC~v~~~~~~~~~~~~l~~ 227 (232)
T 3qhz_H 163 PVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEP 227 (232)
T ss_dssp CCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGGGT-CCCEEEEEEGGGTEEEEEECCC
T ss_pred CeEEEEEECCEecceeeccceeCCCCCEEEEEEEEEchhhcCC-CEEEEEEEeCCCCccEEEEeCC
Confidence 358899988654322111111112222344679999888888 9999999998877666665544
No 237
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.83 E-value=6.2e-20 Score=149.30 Aligned_cols=172 Identities=16% Similarity=0.226 Sum_probs=117.5
Q ss_pred CceeecCCCeEEEEEEE-eeCCCCceEEEeCCEEeeeC----------CcceEEEeecCCcceEEEEEEeccCCCCCeEE
Q psy7036 16 QLRQEDEGNRLIFECQL-LCNPKPDIVWFRGETQLSED----------TRTVMKTTPIGTNKYLVALELDDVIETDAGLY 84 (254)
Q Consensus 16 ~~~~v~~g~~v~l~C~~-~~~~~~~v~W~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 84 (254)
+...+.+|++++|.|.+ .+.|.+.++|+|++..+... ...+.....++ +|.|.+++..|+|.|
T Consensus 374 ~~~~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~~------~L~i~~v~~~D~G~Y 447 (581)
T 3o3u_N 374 QNITARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPNG------SLFLPAVGIQDEGIF 447 (581)
T ss_dssp EEEEEETTSCEEECCTTCCSSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEECTTS------CEEESSCCGGGCEEE
T ss_pred cccceecCCcEEEeeeecCCCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcCCc------eEEEeccccccCeEE
Confidence 44678899999999999 67888999999976522100 01111111111 699999999999999
Q ss_pred EEEEEcCCCce-EEEEEEEEeccccCCCCCccccCCCeeeecCCC-eEEEEEEEee-CCCCeEEEEECCEecccCCcceE
Q psy7036 85 KVKAKNKMGEV-AASINLNFSREQIDGLAPTFLKKPSIRQEDDGK-RLLFECRIQA-DPAPTVIWSHSGVQVKEDKRHKF 161 (254)
Q Consensus 85 ~C~~~~~~~~~-~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~-~~~l~C~~~~-~~~~~~~W~~~~~~~~~~~~~~~ 161 (254)
+|.+.+..+.. ...+.|.|...+ ..|.+..... .+..+. .+.|.|.+.+ +|.+.+.|++++..+........
T Consensus 448 ~C~~~n~~~~~~~~~~~l~V~~~~---~~p~i~~~~~--~~~~~~~~~~l~C~~~~~~P~~~i~W~~~g~~l~~~~~~~~ 522 (581)
T 3o3u_N 448 RCQAMNRNGKETKSNYRVRVYQIP---GKPEIVDSAS--ELTAGVPNKVGTCVSEGSYPAGTLSWHLDGKPLVPNEKGVS 522 (581)
T ss_dssp EEEEECTTSCEEEEEEEEEEEBCC---CCCEEESCCS--EECTTSCEEEEEEEEEEEBSCCEEEEEETTEECCTTSTTEE
T ss_pred EEEEEcCCCceeEEEEEEEEEcCC---CCCEEEcCCc--ccccCCceeEEEEECCCCCCCCeEEEEECCEECCCCCCeEE
Confidence 99999988876 677888886421 2333322222 234444 4567999988 59999999999998865433221
Q ss_pred E-----E--cCCCCceeeEEEEccCC-CCCceeEEEEEEcCCCcc
Q psy7036 162 S-----I--DKDGHSYFASLEIIDVT-IEDAGKYKVTAKNELGES 198 (254)
Q Consensus 162 ~-----~--~~~~~~~~~~l~i~~~~-~~d~G~y~C~~~~~~~~~ 198 (254)
. . ....+...++|.|..++ .++.|.|+|.+.|.....
T Consensus 523 ~~~~~~~~~~~g~y~~~s~L~i~~~~~~d~~~~y~C~~~n~~~~~ 567 (581)
T 3o3u_N 523 VKEQTRRHPETGLFTLQSELMVTPARGGDPRPTFSCSFSPGLPRH 567 (581)
T ss_dssp EEEEEEECTTTCCEEEEEEEEECCCTTSCSCCCEEEEEECSSCSS
T ss_pred EEeeeEEcCCCceEEEEEEEEEEeccccCCCceEEEEEeccCCCC
Confidence 1 1 12223445789999988 555789999999986543
No 238
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.83 E-value=3.3e-19 Score=129.46 Aligned_cols=189 Identities=11% Similarity=0.167 Sum_probs=112.7
Q ss_pred eCCCceeecCCCeEEEEEEEee--CCCCceEEEeCC--E---Ee-e---e--------CCcceEEEeecCCcceEEEEEE
Q psy7036 13 QKPQLRQEDEGNRLIFECQLLC--NPKPDIVWFRGE--T---QL-S---E--------DTRTVMKTTPIGTNKYLVALEL 73 (254)
Q Consensus 13 ~~~~~~~v~~g~~v~l~C~~~~--~~~~~v~W~~~~--~---~~-~---~--------~~~~~~~~~~~~~~~~~~~l~i 73 (254)
..+..+.+.+|++|+|.|.+.+ .....+.|||.. . .+ . . ....++....+. .....+|.|
T Consensus 4 ~~~~~v~v~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~-~~~~~sL~I 82 (248)
T 3u2s_H 4 VESGGGVVQPGSSLRLSCAASGFDFSRQGMHWVRQAPGQGLEWVAFIKYDGSEKYHADSVWGRLSISRDN-SKDTLYLQM 82 (248)
T ss_dssp EEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEEG-GGTEEEEEE
T ss_pred ecCCCEEEeCCCCEEEEEEeccccCCccEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecC-CCCEEEEEE
Confidence 4566788999999999999975 235679999732 1 11 0 0 011122222111 123458999
Q ss_pred eccCCCCCeEEEEEEEcCC----------------------CceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEE
Q psy7036 74 DDVIETDAGLYKVKAKNKM----------------------GEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLL 131 (254)
Q Consensus 74 ~~~~~~d~G~Y~C~~~~~~----------------------~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 131 (254)
.+++.+|+|.|.|.+.+.. ........|.|.. ....+|.+........+..|+.+.
T Consensus 83 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~V~~--~~~~~P~v~~~~~~~~~~~g~~~~ 160 (248)
T 3u2s_H 83 NSLRVEDTATYFCVREAGGPDYRNGYNYYDFYDGYYNYHYMDVWGKGTTVTVSS--ASTKGPSVFPLAPSSKSTSGGTAA 160 (248)
T ss_dssp CSCCGGGCEEEEEEEEEEECEEETTEEEECGGGCCEEEEEEEEECCCEEEEECS--CCCBCCEEEEECCC------CEEE
T ss_pred CCCCHHHCEEEEEEEeCCCCccccccccccccccccccccceeeCCCEEEEEcc--cCCCCCEEEEeCCCccccCCCcEE
Confidence 9999999999999998641 1111234555542 111333333222223345689999
Q ss_pred EEEEEeeC-C-CCeEEEEECCEecccCCcceEEEcCCC-CceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEE
Q psy7036 132 FECRIQAD-P-APTVIWSHSGVQVKEDKRHKFSIDKDG-HSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNF 206 (254)
Q Consensus 132 l~C~~~~~-~-~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v 206 (254)
|.|.+.+. | ...+.|++++..+........ ...++ +...+.|.|.....+| |.|+|.+.|..+.......+.+
T Consensus 161 L~C~~~~~~P~~~~v~W~~~g~~~~~~~~~~~-~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~l~~ 236 (248)
T 3u2s_H 161 LGCLVKDYFPEPVTVSWNSGALTSGVHTFPAV-LQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEP 236 (248)
T ss_dssp EEEEEEEEBSSCCEEEEGGGTBCTTEEECCCE-ECTTSCEEEEEEEEEEGGGBTT-BCCEEEEEEGGGTEEEEEECCC
T ss_pred EEEEEeeEECCCeEEEEeECCccCceeecCce-ECCCCCEEEEEEEEEChhhcCC-CeEEEEEEECCCCcceEEEEcc
Confidence 99999874 4 356999998865432211111 22233 2344678888888888 9999999998776665555443
No 239
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.82 E-value=1.8e-19 Score=131.35 Aligned_cols=188 Identities=13% Similarity=0.177 Sum_probs=115.5
Q ss_pred CeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCC--E---Eeee--C--------CcceEEEeecCCcceEEEEEE
Q psy7036 9 PSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGE--T---QLSE--D--------TRTVMKTTPIGTNKYLVALEL 73 (254)
Q Consensus 9 p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~--~---~~~~--~--------~~~~~~~~~~~~~~~~~~l~i 73 (254)
+.+.+.|..+.+.+|++++|.|.+. .+.+.+.|||+. . .+.. . ...++...... .....|.|
T Consensus 4 ~~v~q~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~--~~~~~L~I 80 (252)
T 1oga_E 4 GGITQSPKYLFRKEGQNVTLSCEQN-LNHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREK--KESFPLTV 80 (252)
T ss_dssp -CEECSCSEEEEETTCCEEECCEEC-SCCSEEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSS--TTBCCEEE
T ss_pred ccceEcCCeEEEcCCCcEEEEEEeC-CCCCEEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEecC--CCEEEEEE
Confidence 3567778888999999999999985 457889999853 1 1110 0 11122222111 12237999
Q ss_pred eccCCCCCeEEEEEEEcCC---CceEEEEEEEEeccccCCCCCcccc-CCCeeeecCCCeEEEEEEEeeC-CCC-eEEEE
Q psy7036 74 DDVIETDAGLYKVKAKNKM---GEVAASINLNFSREQIDGLAPTFLK-KPSIRQEDDGKRLLFECRIQAD-PAP-TVIWS 147 (254)
Q Consensus 74 ~~~~~~d~G~Y~C~~~~~~---~~~~~~~~l~v~~~~~~~~~~~~~~-~~~~~~~~~g~~~~l~C~~~~~-~~~-~~~W~ 147 (254)
.+++.+|+|.|.|.+.+.. ........|.|........+|.+.. .+....+..|+.+.|.|.+.+. |.+ .+.|+
T Consensus 81 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~ 160 (252)
T 1oga_E 81 TSAQKNPTAFYLCASSSRSSYEQYFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWW 160 (252)
T ss_dssp CSCCSCCCEEEEEEEESSTTSCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEE
T ss_pred CcCChhhCEEEEEEEecCCccceeECCCEEEEEecccCCCCCCeEEEECCChhhhccCCceEEEEEEeeEcCCCcEEEEE
Confidence 9999999999999999752 1112234566653111113443332 2222234468899999999885 654 89999
Q ss_pred ECCEecccCCcce--EE----EcCCC-CceeeEEEEccCCCC-CceeEEEEEEcCCCcce
Q psy7036 148 HSGVQVKEDKRHK--FS----IDKDG-HSYFASLEIIDVTIE-DAGKYKVTAKNELGESN 199 (254)
Q Consensus 148 ~~~~~~~~~~~~~--~~----~~~~~-~~~~~~l~i~~~~~~-d~G~y~C~~~~~~~~~~ 199 (254)
+++..+....... .. ...++ +...+.|.|...... |.|.|+|.+.|......
T Consensus 161 ~~g~~l~~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l~~~ 220 (252)
T 1oga_E 161 VNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 220 (252)
T ss_dssp ETTEEECSSEEECSSCEESCTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCTT
T ss_pred ECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCCCC
Confidence 9998875432110 00 01222 233456888766654 57799999999866544
No 240
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.82 E-value=1.1e-18 Score=123.91 Aligned_cols=137 Identities=26% Similarity=0.521 Sum_probs=108.2
Q ss_pred CCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEeccc-CCcceEEEcCCCCceeeEEEEccCCC-CCceeEE
Q psy7036 111 LAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKE-DKRHKFSIDKDGHSYFASLEIIDVTI-EDAGKYK 188 (254)
Q Consensus 111 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~i~~~~~-~d~G~y~ 188 (254)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.. ..........++. +.|.|.++.. +|+|.|+
T Consensus 5 ~pP~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~---~~L~i~~v~~~~d~G~Y~ 81 (212)
T 2yd1_A 5 HPPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGI---SILRIEPVRAGRDDAPYE 81 (212)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCTTSTTEEEEEETTTE---EEEEESSCCTTTTCSEEE
T ss_pred CCCEEEcCCCceEEecCCEEEEEEEEccCCCCeEEEEECCEECCCCcceeEEEEcCCCe---EEEEEEecCCCCcCceEE
Confidence 567777777778889999999999999999999999999998863 2333333222322 3899999999 9999999
Q ss_pred EEEEcCCCc-ceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEeccCCCceeC
Q psy7036 189 VTAKNELGE-SNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEPEPTISW 254 (254)
Q Consensus 189 C~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p~p~~~W 254 (254)
|.+.|..+. ....+.|.|....... ...|.+...+....+.+|+ .+.|.|.+.|.|.|.++|
T Consensus 82 C~~~n~~g~~~~~~~~l~V~~~~~~~---~~~p~~~~~~~~~~~~~g~-~v~l~C~~~g~p~p~i~W 144 (212)
T 2yd1_A 82 CVAENGVGDAVSADATLTIYEGDKTP---AGFPVITQGPGTRVIEVGH-TVLMTCKAIGNPTPNIYW 144 (212)
T ss_dssp EEEECSSSCEEEEEEEEEEECTTCSC---TTCCEEEECCCCEEEETTC-CEEECCEEECSSCCEEEE
T ss_pred EEEEeCCCCeEEeeEEEEEecccCCC---CCCCeeEeCCCceEeecCC-eEEEEEEeccCCCCeEEE
Confidence 999999888 6777888887533221 1247777777777788899 999999999999999998
No 241
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.82 E-value=6.6e-19 Score=129.71 Aligned_cols=207 Identities=15% Similarity=0.157 Sum_probs=104.9
Q ss_pred eEeCCCceeecCCCeEEEEEEEeeCCCCc-eEEEeC--CEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEEE
Q psy7036 11 FTQKPQLRQEDEGNRLIFECQLLCNPKPD-IVWFRG--ETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKVK 87 (254)
Q Consensus 11 ~~~~~~~~~v~~g~~v~l~C~~~~~~~~~-v~W~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 87 (254)
+.+.|+...|.+|+++.|+|.+. .+.+. +.|.-. +..+... +.....+.|.+++.. |.|.|.
T Consensus 2 ~~v~P~~~~V~~G~sv~l~Cs~~-c~~p~~~~~~t~l~~~~~~~~------------g~~~~~~~l~~v~~~--~~y~C~ 66 (291)
T 1mq8_A 2 TSVSPSKVILPRGGSVLVTCSTS-CDQPKLLGIETPLPKKELLLP------------GNNRKVYELSNVQED--SQPMCY 66 (291)
T ss_dssp EEEECSEEEECTTCEEEEEEEEC-CSSCSEEEEECSSCCCCCCCS------------CSSEEEEEEESCCSC--CCCEEE
T ss_pred eEEeCCccEEcCCCeEEEEEeCC-CCCCccceEEecCCCcccccC------------CCceEEEEEEecccC--CeEEEE
Confidence 45667788999999999999996 44444 888531 1111000 111115788888743 469999
Q ss_pred EEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCC-C--eEEEEECCEecccCCcceEEEc
Q psy7036 88 AKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPA-P--TVIWSHSGVQVKEDKRHKFSID 164 (254)
Q Consensus 88 ~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~-~--~~~W~~~~~~~~~~~~~~~~~~ 164 (254)
+..........+.|.|... |...........+.+|+.++|.|.+.+..+ . .|.|+|+++.+.....
T Consensus 67 ~~~~~~~~~~~v~l~V~~~-----P~~v~I~~~~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~~~------ 135 (291)
T 1mq8_A 67 SNCPDGQSTAKTFLTVYWT-----PERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPA------ 135 (291)
T ss_dssp EECSSCEEEEECEEEECBC-----CSCCCBCCCCSBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEEEEC------
T ss_pred EEcCCccEEEEEEEEEecC-----CCCCEEecCCccccCCCCEEEEEEecCccCCCCcEEEEEECCEEeecccC------
Confidence 9754444556667777631 222222222234778999999999887543 3 5899999977753321
Q ss_pred CCCCceeeEEEEccCCCCCceeEEEEEEcCCCc--------ceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCC
Q psy7036 165 KDGHSYFASLEIIDVTIEDAGKYKVTAKNELGE--------SNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLN 236 (254)
Q Consensus 165 ~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~--------~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~ 236 (254)
........+.+...+.+|.+.|+|+|.|..+. .+....+.|...++ ..+.+.. |. .+.+|+
T Consensus 136 -~~~~~~~~l~~~~~~~D~g~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~~~P~------~~~~~~~-p~--~l~eG~- 204 (291)
T 1mq8_A 136 -VGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPA------TPPQLVS-PR--VLEVDT- 204 (291)
T ss_dssp -CBTTEEEEEECCCSSSCSSCEEEEEEEEECGGGTSCEEEECCCCEECBC------------------------------
T ss_pred -CCCCceEEEEeeeeeccCCceEEEEEEecCCccCCccccccccceEEEEEecCC------CCceecC-Cc--CccCCC-
Confidence 01112236777766677777999999987553 13334555543111 0122222 22 456788
Q ss_pred cEEEEEEEeccCCC---ceeC
Q psy7036 237 DIVIECRLVGEPEP---TISW 254 (254)
Q Consensus 237 ~~~l~C~~~~~p~p---~~~W 254 (254)
.+.|.|.+.|.|++ .++|
T Consensus 205 ~v~l~C~~~g~~P~~~~~v~w 225 (291)
T 1mq8_A 205 QGTVVCSLDGLFPVSEAQVHL 225 (291)
T ss_dssp ---------------------
T ss_pred eEEEEEEcCCCCCCcccEEEE
Confidence 99999999998554 4777
No 242
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.81 E-value=1.1e-18 Score=122.21 Aligned_cols=132 Identities=19% Similarity=0.418 Sum_probs=103.7
Q ss_pred CCccccCCCeeeecCCCeEEEEEEEe-eCCCCeEEEEECCEecccCCc--ceEEEcCCCC-ce--eeEEEEccCCCCCce
Q psy7036 112 APTFLKKPSIRQEDDGKRLLFECRIQ-ADPAPTVIWSHSGVQVKEDKR--HKFSIDKDGH-SY--FASLEIIDVTIEDAG 185 (254)
Q Consensus 112 ~~~~~~~~~~~~~~~g~~~~l~C~~~-~~~~~~~~W~~~~~~~~~~~~--~~~~~~~~~~-~~--~~~l~i~~~~~~d~G 185 (254)
+|.+...+....+.+|+.+.|.|.+. +.|.+.+.|++++..+..... .++....++. .+ .+.|.|.+++.+|+|
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 81 (195)
T 2c5d_C 2 ESPFVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTG 81 (195)
T ss_dssp CCSEEECCCCEEECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTCE
T ss_pred CCeeccChhheEEecCCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCCc
Confidence 45556667778899999999999999 899999999999998876532 2333333221 22 458999999999999
Q ss_pred eEEEEEEcCCCcce-EEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEeccCCC-ceeC
Q psy7036 186 KYKVTAKNELGESN-ATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEPEP-TISW 254 (254)
Q Consensus 186 ~y~C~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p~p-~~~W 254 (254)
.|+|.+.|..+... ..+.|.|.. +|.+...+....+.+|+ .+.|.|.+.|.|.| .++|
T Consensus 82 ~Y~C~~~~~~~~~~~~~~~l~V~~----------~p~~~~~~~~~~~~~g~-~~~l~C~~~g~p~p~~v~W 141 (195)
T 2c5d_C 82 QYQCLVFLGHQTFVSQPGYVGLEG----------LPYFLEEPEDRTVAANT-PFNLSCQAQGPPEPVDLLW 141 (195)
T ss_dssp EEEEEEEETTEEEECCCEEEEECC----------SCEEEECCCCEEECTTC-CEEEEEEEECSSCCCEEEE
T ss_pred EEEEEEEeCCCceecccEEEEEec----------CCeEEcCCCcEEEcCCC-EEEEEeECCCCCCCCEEEE
Confidence 99999999877543 336677753 57777777777888999 99999999999999 8998
No 243
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.81 E-value=8e-19 Score=124.61 Aligned_cols=137 Identities=23% Similarity=0.455 Sum_probs=105.0
Q ss_pred CCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCC-CCCceeEEE
Q psy7036 111 LAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVT-IEDAGKYKV 189 (254)
Q Consensus 111 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~-~~d~G~y~C 189 (254)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.............. .+.|.|.++. .+|+|.|+|
T Consensus 5 ~~P~~~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~---~~~L~i~~v~~~~d~G~Y~C 81 (212)
T 2yd6_A 5 TPPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGS---GSVLRIQPLRTPRDEAIYEC 81 (212)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCTTEEEEEEGGGT---EEEEEECSCCTTTTCEEEEE
T ss_pred CCCeEEeCcceeEEecCCeEEEEEEEeeCCCCEEEEEECCcCCCCCceeEEEEcCCC---ceEEEEeccCCCCCCeEEEE
Confidence 345555556667788999999999999999999999999998865433222222111 1379999994 999999999
Q ss_pred EEEcCCCcceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEeccCCCceeC
Q psy7036 190 TAKNELGESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEPEPTISW 254 (254)
Q Consensus 190 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p~p~~~W 254 (254)
.+.|..|.....+.|.|...... ....|.+...+....+.+|+ .+.|.|.+.|.|.|.++|
T Consensus 82 ~a~n~~g~~~~~~~l~V~~~~~~---~~~~p~~~~~~~~~~~~~g~-~v~l~C~~~g~p~p~v~W 142 (212)
T 2yd6_A 82 VASNNVGEISVSTRLTVLREDQI---PRGFPTIDMGPQLKVVERTR-TATMLCAASGNPDPEITW 142 (212)
T ss_dssp EEEETTEEEEEEEEEEEECGGGC---CTTCCEEEECCCCEEEETTS-CEEEEEEEECSSCCEEEE
T ss_pred EEEcCCCcEEEEEEEEEeccCcc---CCCcceeecCCcceeEecCC-CEEEEEEecCCCCCeEEE
Confidence 99999988878888888753211 12346777777777788888 999999999999999998
No 244
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=99.81 E-value=7.3e-21 Score=135.30 Aligned_cols=186 Identities=11% Similarity=0.099 Sum_probs=114.2
Q ss_pred CCe-eEeCCCceeecCCCeEEEEEEEeeCCC---CceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeE
Q psy7036 8 APS-FTQKPQLRQEDEGNRLIFECQLLCNPK---PDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGL 83 (254)
Q Consensus 8 ~p~-~~~~~~~~~v~~g~~v~l~C~~~~~~~---~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 83 (254)
.|. +.+.|....+.+|++++|.|.+.+.+. +.++| + +..+.............+.......|.|.+++..|+|.
T Consensus 3 ~p~v~~~~P~~~~v~~G~~v~L~C~~~g~~p~~~~~v~W-~-~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~g~ 80 (214)
T 1ow0_A 3 HPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW-T-PSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKT 80 (214)
T ss_dssp CCCCEEECCCHHHHHHCSSCCCEEEETTCCSCCCCCCCB-S-SCSSCCCEECCCCCCSTTCCCEEEECTTTHHHHHHTCE
T ss_pred CCEEEEECcChHHhccCCCcEEEEEEeeeECCCCeEEEE-c-CCCCCCcccCCceECCCCcEEEEEEEEEeHHHcCCCCe
Confidence 344 456688878899999999999987643 68999 4 43332110000000011112244579999999999999
Q ss_pred EEEEEEcCCCceEEEEEEEEeccccCCCCCcccc-CCCeeeecCCCeEEEEEEEeeC-CC-CeEEEEECCEecccCCcc-
Q psy7036 84 YKVKAKNKMGEVAASINLNFSREQIDGLAPTFLK-KPSIRQEDDGKRLLFECRIQAD-PA-PTVIWSHSGVQVKEDKRH- 159 (254)
Q Consensus 84 Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~-~~~~~~~~~g~~~~l~C~~~~~-~~-~~~~W~~~~~~~~~~~~~- 159 (254)
|+|.+.+..+.......+.+. ....+|.+.. .+....+..|+.+.|.|.+.++ |. +.+.|+|++..+......
T Consensus 81 Y~C~~~~~~~~~~~~~~i~~~---~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~ 157 (214)
T 1ow0_A 81 FTCTAAYPESKTPLTATLSKS---GNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYLT 157 (214)
T ss_dssp EEEEECCSSCSSCEEEEEECC---SSCCCCEEEEECCCTTTTTSSSEEEEEEEEEEESSSCCEEEEEETTEECCGGGSEE
T ss_pred EEEEEecCCCCCceeEeeccC---CCCCCCEEEecCCCHHHhccCCceEEEEEEeeeECCCcEEEEEECCEECCCCceee
Confidence 999999877643333333320 1113444322 2222235578899999999985 43 489999999887644211
Q ss_pred -eEEEc---CCCC-ceeeEEEEccCCCCCceeEEEEEEcCCCcc
Q psy7036 160 -KFSID---KDGH-SYFASLEIIDVTIEDAGKYKVTAKNELGES 198 (254)
Q Consensus 160 -~~~~~---~~~~-~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~ 198 (254)
..... .++. ...+.|.|.....++.|.|+|.|.|.....
T Consensus 158 ~~~~~~~~~~dgt~~~~s~l~v~~~~~~~~~~ytC~v~n~~l~~ 201 (214)
T 1ow0_A 158 WASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEALPL 201 (214)
T ss_dssp CCCEECSCSSSCCEEEEEEEEEEHHHHHHTCCEEEEEECTTCTT
T ss_pred cCCcccccCCCCcEEEEEEEEECHHHccCCCEEEEEEECCCCCC
Confidence 12233 3332 334556666555556889999999987554
No 245
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.80 E-value=6.1e-19 Score=123.40 Aligned_cols=131 Identities=25% Similarity=0.427 Sum_probs=103.5
Q ss_pred CCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCC--cceEEEcCCCCceeeEEEEccCCCCCceeEEE
Q psy7036 112 APTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDK--RHKFSIDKDGHSYFASLEIIDVTIEDAGKYKV 189 (254)
Q Consensus 112 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C 189 (254)
+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... ...+..... .+.|.|.+++.+|+|.|+|
T Consensus 5 ~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~----~~~L~i~~~~~~d~G~Y~C 80 (194)
T 2a38_A 5 APTFTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDG----RAKLTIPAVTKANSGRYSL 80 (194)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEEETT----EEEEEESSCCGGGCEEEEE
T ss_pred CCeEEccCCceEEECCCEEEEEEEEEecCCCEEEEEECCEEcccccCCceEEEeCCC----EEEEEECCCCcccCEEEEE
Confidence 4445555566788899999999999999999999999998876543 223322222 2379999999999999999
Q ss_pred EEEcCCCcceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEeccCCCceeC
Q psy7036 190 TAKNELGESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEPEPTISW 254 (254)
Q Consensus 190 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p~p~~~W 254 (254)
.+.|..+.......+.|... ..+|.+...+....+..|+ .+.|.|.+.|+|.|.++|
T Consensus 81 ~~~n~~~~~~~~~~l~v~~~-------~~~p~~~~~~~~~~~~~g~-~~~l~C~~~g~p~~~v~W 137 (194)
T 2a38_A 81 KATNGSGQATSTAELLVKAE-------TAPPNFVQRLQSMTVRQGS-QVRLQVRVTGIPTPVVKF 137 (194)
T ss_dssp EEEETTEEEEEEEEEEEECC-------CEEEEEEECCCCEEECTTE-EEEEEEEEEEESCCEEEE
T ss_pred EEEcCCceEeEEEEEEEccC-------CCCCEEEeCCccEEEcCCC-EEEEEEEEEEecCCeEEE
Confidence 99999888777777777631 2356677677777888899 999999999999999998
No 246
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.80 E-value=1.3e-18 Score=111.09 Aligned_cols=98 Identities=16% Similarity=0.261 Sum_probs=83.4
Q ss_pred CCCCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeE
Q psy7036 4 AEDFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGL 83 (254)
Q Consensus 4 ~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 83 (254)
....+|.|...+....+.+|++++|.|.+.|.|.+.+.|+|++..+....++.+... .....|.|.+++..|+|.
T Consensus 3 s~~~pp~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~-----~~~~~L~I~~v~~~D~G~ 77 (114)
T 2cqv_A 3 SGSSGPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENS-----ENGSKLTILAARQEHCGC 77 (114)
T ss_dssp CCCCCCEESCCCCSEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCCSSSEEEEEC-----SSEEEEEETTCCTTTCEE
T ss_pred CCCCCCEEEeCCCCeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCCCCEEEEEc-----CCEEEEEECCCChhcCEE
Confidence 456789999999999999999999999999999999999999998876665554422 123489999999999999
Q ss_pred EEEEEEcCCCceEEEEEEEEecc
Q psy7036 84 YKVKAKNKMGEVAASINLNFSRE 106 (254)
Q Consensus 84 Y~C~~~~~~~~~~~~~~l~v~~~ 106 (254)
|+|.+.|..|.....+.|.|...
T Consensus 78 Y~C~a~N~~g~~~~~~~l~V~~~ 100 (114)
T 2cqv_A 78 YTLLVENKLGSRQAQVNLTVVDK 100 (114)
T ss_dssp EEEEEECSSCEEECCEEEEEECS
T ss_pred EEEEEEECCCcEEEEEEEEEECC
Confidence 99999999998888888988753
No 247
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.80 E-value=2.2e-18 Score=119.30 Aligned_cols=128 Identities=21% Similarity=0.454 Sum_probs=100.9
Q ss_pred ccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEc
Q psy7036 114 TFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKN 193 (254)
Q Consensus 114 ~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~ 193 (254)
.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.......+.... ....+.|.|.+++.+|.|.|+|.+.|
T Consensus 4 ~~~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~--~~~~~~L~i~~~~~~d~G~Y~C~~~~ 81 (182)
T 1rhf_A 4 KLMGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSE--QHWIGFLSLKSVERSDAGRYWCQVED 81 (182)
T ss_dssp ---CCCEEEEEETTCCEEEEEEEESCSSCCEEEEETTEECCSSEEEEEEEET--TEEEEEEEESSCCGGGCEEEEEEESS
T ss_pred EEEeCCcceEEeCCCcEEEEEEEeCCCCCeEEEEECCeecCCCCceEEEecC--CCceEEEEEeecCcccCeEEEEEEEc
Confidence 3445556678889999999999999899999999999988765443333322 22345899999999999999999999
Q ss_pred CCCc-ceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEeccCCC-ceeC
Q psy7036 194 ELGE-SNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEPEP-TISW 254 (254)
Q Consensus 194 ~~~~-~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p~p-~~~W 254 (254)
..+. ....+.|.|.. +|.+...+....+.+|+ .+.|.|.+.|.|.| .++|
T Consensus 82 ~~~~~~~~~~~l~V~~----------~p~~~~~~~~~~~~~g~-~~~l~C~~~g~p~p~~v~W 133 (182)
T 1rhf_A 82 GGETEISQPVWLTVEG----------VPFFTVEPKDLAVPPNA-PFQLSCEAVGPPEPVTIVW 133 (182)
T ss_dssp CTTCEECCCEEEEEEC----------SCEEEECCCCEEECTTC-CEEEEEEEECSSSCCEEEE
T ss_pred CCCcEEEEEEEEEEec----------CCeEEecCcceEecCCC-EEEEEeEecCCCCCCEEEE
Confidence 8665 34567777764 67777777777888999 99999999999999 8998
No 248
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.80 E-value=2.8e-19 Score=125.65 Aligned_cols=120 Identities=18% Similarity=0.253 Sum_probs=91.8
Q ss_pred eeecCCCeEEEEEE---EeeCCCCeEEEEECCEecccC------C---------cceEEEcCCCCceeeEEEEccCCCCC
Q psy7036 122 RQEDDGKRLLFECR---IQADPAPTVIWSHSGVQVKED------K---------RHKFSIDKDGHSYFASLEIIDVTIED 183 (254)
Q Consensus 122 ~~~~~g~~~~l~C~---~~~~~~~~~~W~~~~~~~~~~------~---------~~~~~~~~~~~~~~~~l~i~~~~~~d 183 (254)
+.+..|+.+.|.|. +.+.|.+.+.|+|++...... . ...+....... ...|.|.+++.+|
T Consensus 3 Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~L~I~~v~~~D 80 (203)
T 4fa8_A 3 VTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSAN--TFFLVVTAANISH 80 (203)
T ss_dssp CEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETT--EEEEEESSCCGGG
T ss_pred eEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCC--EEEEEEccCCHHH
Confidence 45678999999996 456788999999976432110 0 00011111111 2379999999999
Q ss_pred ceeEEEEEEcCCCcceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEeccCCCceeC
Q psy7036 184 AGKYKVTAKNELGESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEPEPTISW 254 (254)
Q Consensus 184 ~G~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p~p~~~W 254 (254)
+|.|+|.|.|..|.....+.|.|.. +|.+...+....+.+|+ .+.|.|.+.|.|.|.++|
T Consensus 81 ~G~Y~C~a~n~~g~~~~~~~l~V~~----------p~~~~~~~~~~~v~~g~-~~~l~C~~~G~P~P~v~W 140 (203)
T 4fa8_A 81 DGNYLCRMKLGETEVTKQEHLSVVK----------PLTLSVHSERSQFPDFS-VLTVTCTVNAFPHPHVQW 140 (203)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEEE----------EEEEEEEEEECCSSCSC-CEEEEEEEEEESCCEEEE
T ss_pred CeEEEEEEEcCCCcEEEEEEEEecC----------CceeeecceeEEEcCCC-EEEEEEEcCCCCCCEEEE
Confidence 9999999999999888888888874 56777777778888999 999999999999999999
No 249
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.80 E-value=1.4e-18 Score=121.86 Aligned_cols=135 Identities=25% Similarity=0.388 Sum_probs=101.4
Q ss_pred CCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCC-cceEEEcCCCCceeeEEEEccCCCCCceeEEE
Q psy7036 111 LAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDK-RHKFSIDKDGHSYFASLEIIDVTIEDAGKYKV 189 (254)
Q Consensus 111 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C 189 (254)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... ...+....++ .+.|.|.+++.+|.|.|+|
T Consensus 3 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~---~~~L~i~~~~~~d~G~Y~C 79 (197)
T 2j8h_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGG---YHQLIIASVTDDDATVYQV 79 (197)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTT---EEEEEECSCCGGGCSEEEE
T ss_pred CCCEEEEcCCccEEcCCCEEEEEEEEeecCCCEEEEEECCEECccCCCcEEEEEcCCC---EEEEEECcCCHHhCEEEEE
Confidence 45666666677788999999999999999999999999998886543 2222222222 2379999999999999999
Q ss_pred EEEcCCCcceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEeccCCCceeC
Q psy7036 190 TAKNELGESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEPEPTISW 254 (254)
Q Consensus 190 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p~p~~~W 254 (254)
.+.|..+.....+.|.|...+. ...|.+...+....+.+|+ .+.|.|.+.|.|.|.+.|
T Consensus 80 ~~~n~~g~~~~~~~l~V~~~p~-----~~~~~~~~~~~~~~~~~g~-~~~l~C~~~g~p~p~i~W 138 (197)
T 2j8h_A 80 RATNQGGSVSGTASLEVEVPAK-----IHLPKTLEGMGAVHALRGE-VVSIKIPFSGKPDPVITW 138 (197)
T ss_dssp EEEETTEEEEEEEEEEEEEEEE-----ECCSSCBTTBEEEEEETTC-CCEEEEEEEEESCCEEEE
T ss_pred EEEECCCceeEEEEEEEcCCCc-----CCCCccccccCeEEEeCCC-EEEEEEEEEecCCCcEEE
Confidence 9999988877777777764211 1122223333445677888 999999999999999998
No 250
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.79 E-value=2e-18 Score=107.14 Aligned_cols=95 Identities=29% Similarity=0.596 Sum_probs=78.7
Q ss_pred CCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEE
Q psy7036 111 LAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVT 190 (254)
Q Consensus 111 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~ 190 (254)
.||.+...+....+.+|+.+.|.|.+.|.|.|.+.|+|++..+......++.....+.. ++|.|.+++.+|+|.|+|.
T Consensus 4 ~PP~i~~~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~--~~L~I~~~~~~D~G~Y~C~ 81 (100)
T 3knb_A 4 IPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDL--TTLIIMDVQKQDGGLYTLS 81 (100)
T ss_dssp EEEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSE--EEEEESSCCGGGCEEEEEE
T ss_pred CCCEEEeCCCcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeecccce--EEEEEcCCCccCCEEEEEE
Confidence 45666666777889999999999999999999999999999987665544444333322 3799999999999999999
Q ss_pred EEcCCCcceEEEEEEEe
Q psy7036 191 AKNELGESNATISLNFD 207 (254)
Q Consensus 191 ~~~~~~~~~~~~~~~v~ 207 (254)
|.|..|....++.|.|+
T Consensus 82 a~N~~G~~~~~~~l~V~ 98 (100)
T 3knb_A 82 LGNEFGSDSATVNIHIR 98 (100)
T ss_dssp EEETTEEEEEEEEEEEE
T ss_pred EEECCCEEEEEEEEEEE
Confidence 99999999888888886
No 251
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.79 E-value=4.9e-18 Score=118.43 Aligned_cols=121 Identities=17% Similarity=0.373 Sum_probs=96.2
Q ss_pred CCccccCCCeeeecC-CCeEEEEEEEeeCCC--CeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEE
Q psy7036 112 APTFLKKPSIRQEDD-GKRLLFECRIQADPA--PTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYK 188 (254)
Q Consensus 112 ~~~~~~~~~~~~~~~-g~~~~l~C~~~~~~~--~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~ 188 (254)
+|.+...+ ...+.+ |+.+.|.|.+.+.+. +.+.|++++..+....... ....|.|.+++.+|+|.|+
T Consensus 3 ~P~i~~~~-~~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~---------~~~~L~i~~~~~~d~G~Y~ 72 (190)
T 2wv3_A 3 EPRIVTSE-EVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNA---------SNMEYRINKPRAEDSGEYH 72 (190)
T ss_dssp CCEEEECC-CEECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCCBCC---------SEEEEEESSCCGGGCEEEE
T ss_pred CCcccccc-eEEEccCCceEEEEEEeccCCCCceEEEEEECCEECcccceEe---------ccEEEEEecCCcccCEEEE
Confidence 34444433 344555 999999999998887 7899999998876443211 1138999999999999999
Q ss_pred EEEEcCCCcceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEeccCCCceeC
Q psy7036 189 VTAKNELGESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEPEPTISW 254 (254)
Q Consensus 189 C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p~p~~~W 254 (254)
|.+.|. +.....+.|.|.. +|.+...+....+.+|+ .+.|.|.+.|+|.|.+.|
T Consensus 73 C~~~n~-~~~~~~~~l~V~~----------~p~~~~~~~~~~~~~g~-~v~l~C~~~g~p~p~i~W 126 (190)
T 2wv3_A 73 CVYHFV-SAPKANATIEVKA----------APDITGHKRSENKNEGQ-DAMMYCKSVGYPHPEWMW 126 (190)
T ss_dssp EEEEET-TEEEEEEEEEEEC----------CCEEEEECSEEEEETTS-CEEEEEEEECSSCCEEEE
T ss_pred EEEEeC-CcccccEEEEEec----------CCcccccCCcceeeCCC-cEEEEEEeCccCCCceEE
Confidence 999998 7777888888874 57777667777788999 999999999999999998
No 252
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.79 E-value=1.1e-18 Score=127.44 Aligned_cols=160 Identities=16% Similarity=0.207 Sum_probs=85.7
Q ss_pred cCCCCCeEEEEEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCC-----CCeEEEEECC
Q psy7036 76 VIETDAGLYKVKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADP-----APTVIWSHSG 150 (254)
Q Consensus 76 ~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~-----~~~~~W~~~~ 150 (254)
++..|+|.|+|.+. |.......+.+. .++.+...+....+.+|+.++|.|.+.+.+ .+.+.|+|+.
T Consensus 11 v~~~dsg~Y~C~a~---g~~~~~~~~~~~------~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~ 81 (254)
T 2c1o_A 11 VRPGTSVKLSCKAS---GYSFTNYWMNWL------RELVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQR 81 (254)
T ss_dssp ------------------------------------CCCEEEECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEEC
T ss_pred ecCCccEEEEEcCc---hhhhhhhhhhee------eceeEEeCCceEEecCCCcEEEEeeccCcccccCCCCceEEEEeC
Confidence 67899999999998 333333333332 244455556678889999999999998887 3789999843
Q ss_pred --Eec----------ccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcc-eEEEEEEEecCCCCCCCCC
Q psy7036 151 --VQV----------KEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGES-NATISLNFDSDDAPVPGEG 217 (254)
Q Consensus 151 --~~~----------~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~-~~~~~~~v~~~~~~~~~~~ 217 (254)
..+ ......++.....+ ..+.|.|.+++.+|+|.|+|.+.|..+.. .....+.|... .
T Consensus 82 ~g~~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~-------~ 152 (254)
T 2c1o_A 82 PGQSPKRLIYLVSKLDSGDPDRFTGSGSG--TDFTLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKRA-------D 152 (254)
T ss_dssp TTSCCEEEEETTTEECTTCCTTEEEEEET--TEEEEEESSCCGGGCSEEEEEECSSSSCEEBCCEEEEECCC-------C
T ss_pred CCCCceEEEEeccccCCCccceEEEecCC--CEEEEEECcCCcccCEEEEEEEEcCcceEecCCEEEEECCC-------C
Confidence 211 01111122221111 12379999999999999999999876532 22334555421 1
Q ss_pred CCCeeecCCccccccCCCCcEEEEEEEecc-CC-CceeC
Q psy7036 218 TKPVFTERPVTKQSDDDLNDIVIECRLVGE-PE-PTISW 254 (254)
Q Consensus 218 ~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~-p~-p~~~W 254 (254)
.+|.+...+.......|+ .+.|.|.+.|. |. +.++|
T Consensus 153 ~~P~v~~~~~~~~~~~g~-~v~l~C~~~g~~p~~~~v~W 190 (254)
T 2c1o_A 153 AAPTVSIFPPSSEQLTSG-GASVVCFLNNFYPKDINVKW 190 (254)
T ss_dssp BCCEEEEECCCHHHHHTT-EEEEEEEEEEEBSSCCEEEE
T ss_pred CCCeeEeecCChhhccCC-cEEEEEEEecccCCCcEEEE
Confidence 246665544433445688 99999999985 44 35888
No 253
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.78 E-value=7.1e-17 Score=114.12 Aligned_cols=193 Identities=14% Similarity=0.209 Sum_probs=128.8
Q ss_pred CCeeEeCCCceeecCCCeEEEEEEEee-CC---CCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeE
Q psy7036 8 APSFTQKPQLRQEDEGNRLIFECQLLC-NP---KPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGL 83 (254)
Q Consensus 8 ~p~~~~~~~~~~v~~g~~v~l~C~~~~-~~---~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 83 (254)
++.+...|....+..|+.++|+|.+.+ .| ...++|+|||..+..... .|.+..+...|+|.
T Consensus 2 ~~tVs~~P~~~~i~~GdsVTLTatVaGGkP~pspyTYqWyKDG~~IsGaT~---------------tLti~s~t~sdSG~ 66 (304)
T 3shs_A 2 AFTVSIQSNKRCFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHENNTA---------------TLTVADATSENAGS 66 (304)
T ss_dssp CEEEEEEESCSSBCTTCCEEEEEEEEESSSCCCCEEEEEEETTEECSCCSS---------------EEEESSCCGGGCEE
T ss_pred ccEEEeCCCCccccCCCCEEEEEEecCCCCCCCCceEEEEECCccccCCcc---------------eEEeeeccccCCeE
Confidence 345666777788999999999999965 45 457999999988654222 68999999999999
Q ss_pred EEEEEEcCCCceEEEEEEEEeccccCCCCCcc-ccCCCeeeecCCCeEEEEEEE--ee-CC-----CCeEEEEECCEecc
Q psy7036 84 YKVKAKNKMGEVAASINLNFSREQIDGLAPTF-LKKPSIRQEDDGKRLLFECRI--QA-DP-----APTVIWSHSGVQVK 154 (254)
Q Consensus 84 Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~-~~~~~~~~~~~g~~~~l~C~~--~~-~~-----~~~~~W~~~~~~~~ 154 (254)
|+|.+.+..|....+..+.|... ..+.+ ...+....+..+..+.|.+.+ .| .+ ...+.|++++..+.
T Consensus 67 YqCvVTDa~Gcs~tSs~VtVT~~----a~l~i~it~P~s~~vssg~sVtL~aTVt~SGGtppA~~~~yTYQWyKngt~Is 142 (304)
T 3shs_A 67 YKVTVQDTDTMTSVESEVFLMEE----AELIVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVID 142 (304)
T ss_dssp EEEEEEETTTCCEEECCCEEECB----CCEEEEESSCSEEEECSSCCEEEEEEEEETTSCCSSTTCCCEEEEEETTEEEE
T ss_pred EEEEEEECCCCeeeeeeEEEecc----CceeEEecCCCceeccCCCeEEEEEEEeccCCCCcccCCCceeEEeeCCeEcc
Confidence 99999988776544444444321 11111 223444555667888898887 43 33 35899999998664
Q ss_pred cCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCc--ceEEEEEEEecCCCCCCCCCCCCeeecCCcccccc
Q psy7036 155 EDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGE--SNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSD 232 (254)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~ 232 (254)
... .|++......++|.|.|.+.|..+. .+.+..|.+.. .+.-.......++.
T Consensus 143 gAq---------------~lT~sS~TateaG~YtV~VTn~~~~c~~s~~~~i~~~~----------~~v~~~~~~~~~~~ 197 (304)
T 3shs_A 143 TTQ---------------DITIQEFTADKNGVYTVKVWGESEDSAASASTKIMLAT----------MNVDQDVVESKTVA 197 (304)
T ss_dssp SSS---------------EEEECSCCGGGCEEEEEEEESSSGGGCEEEEEEEEECE----------EEEEECCCSEEEEE
T ss_pred Ccc---------------ccceeeEEecCCeEEEEEEEcCCCCcccccceEEEEEc----------cccchhheEeehhh
Confidence 332 4677777888999999999998763 24444444432 11111112233556
Q ss_pred CCCCcEEEEEEEe
Q psy7036 233 DDLNDIVIECRLV 245 (254)
Q Consensus 233 ~g~~~~~l~C~~~ 245 (254)
.|+ .+.|...+.
T Consensus 198 ~~~-~~~~~~~~~ 209 (304)
T 3shs_A 198 LGN-EISLNYVVS 209 (304)
T ss_dssp TTS-CEEECCEEE
T ss_pred cCc-EEEEEEEEe
Confidence 677 777766653
No 254
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.78 E-value=1.4e-17 Score=119.67 Aligned_cols=188 Identities=11% Similarity=0.160 Sum_probs=114.2
Q ss_pred CCCceeecCCCeEEEEEEEeeC--CCCceEEEeCC-----EEe-eeC-----------CcceEEEeecCCcceEEEEEEe
Q psy7036 14 KPQLRQEDEGNRLIFECQLLCN--PKPDIVWFRGE-----TQL-SED-----------TRTVMKTTPIGTNKYLVALELD 74 (254)
Q Consensus 14 ~~~~~~v~~g~~v~l~C~~~~~--~~~~v~W~~~~-----~~~-~~~-----------~~~~~~~~~~~~~~~~~~l~i~ 74 (254)
.|..+.+.+|++|+|.|.+.+. ....+.|||.. ..+ ... ...++....+. ......|.|.
T Consensus 6 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~-~~~~~sL~I~ 84 (230)
T 3n9g_H 6 QSGAEVRKPGASTKVSCKASGYTFTHYYMHWVRQAPGQGLEWMGIINPSGGSTTYAQKLQGRVTMTRDT-STSTVYMELS 84 (230)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEET-TTTEEEEEEC
T ss_pred ecCCEEEcCCCCEEEEEEeecceecCcEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecC-CCCEEEEEEC
Confidence 3446789999999999999752 35679999732 111 000 01122221111 2234579999
Q ss_pred ccCCCCCeEEEEEEEcCC-----Cc---eEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeC-C-CCeE
Q psy7036 75 DVIETDAGLYKVKAKNKM-----GE---VAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQAD-P-APTV 144 (254)
Q Consensus 75 ~~~~~d~G~Y~C~~~~~~-----~~---~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-~-~~~~ 144 (254)
+++.+|+|.|.|.+.+.. +. ......|.|... ...+|.+........+..|+.+.|.|.+.+. | .+.+
T Consensus 85 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~--~~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~~~~v 162 (230)
T 3n9g_H 85 SLRSEDTAVYYCARDWGSNYVWGSYPKYWGQGTLVTVSSA--STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTV 162 (230)
T ss_dssp SCCGGGCEEEEEEEECCCSSSTTCCEEEECCCEEEEECSS--CCBCCEEEEECCCCCCCTTCEEEEEEEEEEEBSSCCEE
T ss_pred CCChhhCEEEEEEEccCCCCcccccccccCCCEEEEEEec--CCCCCEEEecCCCccccCCCCEEEEEEEEeEECCCEEE
Confidence 999999999999998753 11 112345666421 1133333322222334579999999999874 4 3468
Q ss_pred EEEECCEecccCCc-ceEEEcCCC-CceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEe
Q psy7036 145 IWSHSGVQVKEDKR-HKFSIDKDG-HSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFD 207 (254)
Q Consensus 145 ~W~~~~~~~~~~~~-~~~~~~~~~-~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~ 207 (254)
.| ++..+..... .......++ +...+.|.|.....+| |.|+|.|.|..+.......+.+.
T Consensus 163 ~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~v~ 224 (230)
T 3n9g_H 163 SW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPK 224 (230)
T ss_dssp EE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEESTTBTT-BCCEEEEEEGGGTEEEEEECCCC
T ss_pred EE--CCcccCCCeEeCCceECCCCCEEEEEEEEECHHHcCC-CeEEEEEEECCCCcceEEEccCC
Confidence 99 5544432111 111122222 2344689999999899 99999999988776666665554
No 255
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.78 E-value=2.6e-18 Score=119.97 Aligned_cols=127 Identities=27% Similarity=0.525 Sum_probs=100.2
Q ss_pred CCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEE
Q psy7036 112 APTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTA 191 (254)
Q Consensus 112 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~ 191 (254)
+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+..... ++....++. .|.|.+++.+|.|.|+|.+
T Consensus 7 ~P~i~~~~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~~~~-~~~~~~~~~----~L~i~~~~~~d~G~Y~C~~ 81 (192)
T 2iep_A 7 APVITTPLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDT-RYSIRENGQ----LLTILSVEDSDDGIYCCTA 81 (192)
T ss_dssp EEEESSCCCEEEEETTSCEEEECCEEEESCCEEEEEETTEECCTTCT-TEEEEGGGT----EEEESSCCGGGCEEEEEEE
T ss_pred CceeecCccceeeeCCCcEEEEeeCCCCCCCeEEEEECCEEccccCc-cEEEcCCcc----EEEEcCCCcccCeEEEEEE
Confidence 44555556667788999999999999999999999999988764332 222222221 6999999999999999999
Q ss_pred EcCCCcc-eEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEeccCCCceeC
Q psy7036 192 KNELGES-NATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEPEPTISW 254 (254)
Q Consensus 192 ~~~~~~~-~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p~p~~~W 254 (254)
.|..+.. .....+.|.. +|.+...+....+.+|+ .+.|.|.+.|.|.|.++|
T Consensus 82 ~~~~~~~~~~~~~l~v~~----------~p~~~~~~~~~~~~~g~-~~~l~C~~~g~p~~~v~W 134 (192)
T 2iep_A 82 NNGVGGAVESCGALQVKM----------KPKITRPPINVKIIEGL-KAVLPCTTMGNPKPSVSW 134 (192)
T ss_dssp ECSSSCCEEEEEEEEEEE----------EEEEEECCCCEEEETTS-CEEECCEEEEESCCEEEE
T ss_pred EcCCCceeEeEEEEEEEe----------CCccccCCcceEEeCCC-cEEEEEEEeccCCceEEE
Confidence 9988773 5556676664 56677667777788899 999999999999999998
No 256
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.78 E-value=3.8e-18 Score=106.85 Aligned_cols=98 Identities=21% Similarity=0.381 Sum_probs=83.2
Q ss_pred CCCCCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCe
Q psy7036 3 IAEDFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAG 82 (254)
Q Consensus 3 ~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G 82 (254)
+....+|.|...+....+.+|+++.|.|.+.+.|.+.+.|+|++..+....++.+... .....|.|.+++..|+|
T Consensus 3 l~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~-----~~~~~L~i~~~~~~D~G 77 (103)
T 3qp3_A 3 FTLDHAPRITLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYTNT-----SGVLTLEILDCHTDDSG 77 (103)
T ss_dssp TTTCEEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEE-----TTEEEEEECSCCGGGCE
T ss_pred CCCCCCCEEEeCCcceEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCEEEEEC-----CCEEEEEEcCCCcccCE
Confidence 4456689999999999999999999999999999999999999999877666544322 12337999999999999
Q ss_pred EEEEEEEcCCCceEEEEEEEEec
Q psy7036 83 LYKVKAKNKMGEVAASINLNFSR 105 (254)
Q Consensus 83 ~Y~C~~~~~~~~~~~~~~l~v~~ 105 (254)
.|+|.+.|..|.....+.|.|..
T Consensus 78 ~Y~C~a~N~~G~~~~~~~l~V~~ 100 (103)
T 3qp3_A 78 TYRAVCTNYKGEASDYATLDVTG 100 (103)
T ss_dssp EEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEEEEeCCCcEEEEEEEEEEC
Confidence 99999999999988888888863
No 257
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.78 E-value=6e-18 Score=118.55 Aligned_cols=129 Identities=23% Similarity=0.416 Sum_probs=99.3
Q ss_pred CCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEE
Q psy7036 111 LAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVT 190 (254)
Q Consensus 111 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~ 190 (254)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.......+..... ...|.|.+++.+|+|.|+|.
T Consensus 6 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~ 81 (197)
T 3lcy_A 6 EAPGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSDGR----THTLTVMTEEQEDEGVYTCI 81 (197)
T ss_dssp EEEEEEECCCCEEEETTSEEEEEEEEEEESCCEEEEEETTEEECCCSSEEEEESSS----EEEEEEECCSGGGCEEEEEE
T ss_pred CCCcccccCCceEEeCCCcEEEEEEEecCCCCEEEEEECCEECCCCccEEEEeCCC----EEEEEEecCCccCCEEEEEE
Confidence 34455555667788899999999999999999999999999887655544433222 23799999999999999999
Q ss_pred EEcCCCcceEEEEEEEecCCCCCCCCCCCCeeec---CCccccccCCCCcEEEEEEEeccCCCceeC
Q psy7036 191 AKNELGESNATISLNFDSDDAPVPGEGTKPVFTE---RPVTKQSDDDLNDIVIECRLVGEPEPTISW 254 (254)
Q Consensus 191 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~---~~~~~~~~~g~~~~~l~C~~~~~p~p~~~W 254 (254)
+.|..+.......+.|.. +|.+.. .+....+..|+ .+.|.|.+.|+|.|.+.|
T Consensus 82 ~~n~~~~~~~~~~l~v~~----------~p~~~~~~~~~~~~~~~~g~-~~~l~C~~~~~p~p~v~W 137 (197)
T 3lcy_A 82 ATNEVGEVETSSKLLLQA----------TPQFHPGYPLKEKYYGAVGS-TLRLHVMYIGRPVPAMTW 137 (197)
T ss_dssp EECSSCEEEEEEEEEEEE----------EEEECTTSCCCSEEEEETTS-CEEEEEEEEEESCCEEEE
T ss_pred EECCCCceeEEEEEEEEc----------CCCCCCCccCCcceeecCCC-eEEEEEEEeeeeCCeeEE
Confidence 999988887777777764 222221 12334566788 999999999999999998
No 258
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.77 E-value=5.2e-18 Score=127.05 Aligned_cols=156 Identities=18% Similarity=0.303 Sum_probs=108.9
Q ss_pred CCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEec-cCCCCCeEEEEEEEcCCC
Q psy7036 15 PQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDD-VIETDAGLYKVKAKNKMG 93 (254)
Q Consensus 15 ~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~-~~~~d~G~Y~C~~~~~~~ 93 (254)
+....+.+|+.+.|.|.+.+.|.+.+.|++++..+....++.+.... ....|.|.+ ++..|+|.|+|.+.|..|
T Consensus 111 ~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~-----~~~~l~i~~~~~~~d~G~Y~C~a~N~~G 185 (305)
T 2nzi_A 111 MGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTR-----SFTSLVFPNGVERKDAGFYVVCAKNRFG 185 (305)
T ss_dssp SCCEEEETTCCEEEEEEEEEESCCEEEEEESSSBCCSSSSCEEEECS-----SEEEEEETTCCCSTTCEEEEEEEEETTE
T ss_pred cccEEecCCCEEEEEEEECCCCCCEEEEEECCEECCCCCcEEEEEcC-----CceEEEEecCCccCccEEEEEEEEeCCC
Confidence 34567889999999999999999999999999888766555443221 123799999 999999999999999999
Q ss_pred ceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEE--------------EeeCCCCeEEEEECCEecccCCcc
Q psy7036 94 EVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECR--------------IQADPAPTVIWSHSGVQVKEDKRH 159 (254)
Q Consensus 94 ~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~--------------~~~~~~~~~~W~~~~~~~~~~~~~ 159 (254)
.....+.|.|...+ .+|... ......+..+.|.|. +...+.+...|.+.+..
T Consensus 186 ~~~~~~~l~v~~~P---~~p~~~----~~~~~~~~~v~l~w~~p~~~g~~~i~~y~v~~~~~~~~~w~~~~~~------- 251 (305)
T 2nzi_A 186 IDQKTVELDVADVP---DPPRGV----KVSDVSRDSVNLTWTEPASDGGSKITNYIVEKCATTAERWLRVGQA------- 251 (305)
T ss_dssp EEEEEEEEEEEBCC---CCCEEE----EEESCCSSCEEEEEECCSCCSBSCEEEEEEEEEETTSCCEEEEEEE-------
T ss_pred ceeeEEEEEEecCC---CCCCCc----eeeeccCCEEEEEEcCCccCCCCceeEEEEEEecCCCCccEECccc-------
Confidence 98888888887422 122110 011123444555554 33333333444433221
Q ss_pred eEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcce
Q psy7036 160 KFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESN 199 (254)
Q Consensus 160 ~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~ 199 (254)
.. ..+.|.++...+.|.|+|.|.|..|...
T Consensus 252 -----~~-----~~~~i~~l~~~~~y~~~~~A~N~~G~~~ 281 (305)
T 2nzi_A 252 -----RE-----TRYTVINLFGKTSYQFRVIAENKFGLSK 281 (305)
T ss_dssp -----SS-----SEEEECSCCSSCEEEEEEEEEETTEECC
T ss_pred -----cC-----ceEEecCCCCCCeEEEEEEEEeCCcccC
Confidence 11 2799999999999999999999988654
No 259
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.77 E-value=6.2e-18 Score=105.06 Aligned_cols=94 Identities=21% Similarity=0.320 Sum_probs=79.8
Q ss_pred CCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEE
Q psy7036 7 FAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKV 86 (254)
Q Consensus 7 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 86 (254)
.+|.|...+....+.+|++++|.|.+.|.|.+.+.|++++..+....+........ ....|.|.+++..|+|.|+|
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~----~~~~L~i~~v~~~D~G~Y~C 79 (99)
T 1g1c_A 4 EAPKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPED----NVCELVIRDVTGEDSASIMV 79 (99)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEEET----TEEEEEECSCCGGGCEEEEE
T ss_pred CCCceEecCcceEEcCCCcEEEEEEEEEeCCCEEEEEECCEECCCCCCEEEEEcCC----CEEEEEECCCCcCCCEEEEE
Confidence 47889999999999999999999999999999999999999988765544332221 23479999999999999999
Q ss_pred EEEcCCCceEEEEEEEEe
Q psy7036 87 KAKNKMGEVAASINLNFS 104 (254)
Q Consensus 87 ~~~~~~~~~~~~~~l~v~ 104 (254)
.+.|..|.....+.|.|.
T Consensus 80 ~a~N~~g~~~~~~~l~V~ 97 (99)
T 1g1c_A 80 KAINIAGETSSHAFLLVQ 97 (99)
T ss_dssp EEEETTEEEEEEEEEEEE
T ss_pred EEEECCCcEEEEEEEEEe
Confidence 999999998888888875
No 260
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.77 E-value=7.7e-18 Score=117.48 Aligned_cols=125 Identities=28% Similarity=0.499 Sum_probs=96.2
Q ss_pred ccCCCeeeecCCCeEEEEEEEeeCC-CCeEEEEE-CCEecccCC-cceEEEcCCCCceeeEEEEccCCCCCceeEEEEEE
Q psy7036 116 LKKPSIRQEDDGKRLLFECRIQADP-APTVIWSH-SGVQVKEDK-RHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAK 192 (254)
Q Consensus 116 ~~~~~~~~~~~g~~~~l~C~~~~~~-~~~~~W~~-~~~~~~~~~-~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~ 192 (254)
...+....+.+|+.+.|.|.+.+.+ .+.+.|++ ++..+.... .......... ...|.|.+++.+|+|.|+|.+.
T Consensus 6 ~~~p~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~---~~~L~i~~~~~~d~G~Y~C~~~ 82 (191)
T 1epf_A 6 DIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDD---SSTLTIYNANIDDAGIYKCVVT 82 (191)
T ss_dssp EEESSSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETT---EEEEEECSCCGGGCEEEEEEEE
T ss_pred EecCCCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCCC---ceEEEEccCCcccCEEEEEEEE
Confidence 3344556788999999999998876 78999999 887766332 2222211111 2389999999999999999999
Q ss_pred cCCC-cceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEeccCCCceeC
Q psy7036 193 NELG-ESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEPEPTISW 254 (254)
Q Consensus 193 ~~~~-~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p~p~~~W 254 (254)
|..+ .....+.|.|.. +|.+...+....+.+|+ .+.|.|.+.|+|.|.++|
T Consensus 83 ~~~~~~~~~~~~l~v~~----------~p~~~~~~~~~~~~~g~-~~~l~C~~~g~p~~~v~W 134 (191)
T 1epf_A 83 AEDGTQSEATVNVKIFQ----------KLMFKNAPTPQEFKEGE-DAVIVCDVVSSLPPTIIW 134 (191)
T ss_dssp ETTTEEEEEEEEEEEEC----------CSEEEECCSSEECCTTS-CEEECCEEECSSCCEEEE
T ss_pred cCCCcceEEEEEEEeec----------CceEecCCCcEeecCCC-eEEEEEEECCCCCCEEEE
Confidence 9874 456667777763 56777777777888999 999999999999999998
No 261
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=99.77 E-value=3.6e-18 Score=125.00 Aligned_cols=183 Identities=11% Similarity=0.165 Sum_probs=106.7
Q ss_pred CCceeecCCCeEEEEEEEeeCC--CCceEEEeCC-----EEe-ee------------CCcceEEEeecCCcceEEEEEEe
Q psy7036 15 PQLRQEDEGNRLIFECQLLCNP--KPDIVWFRGE-----TQL-SE------------DTRTVMKTTPIGTNKYLVALELD 74 (254)
Q Consensus 15 ~~~~~v~~g~~v~l~C~~~~~~--~~~v~W~~~~-----~~~-~~------------~~~~~~~~~~~~~~~~~~~l~i~ 74 (254)
+..+.+.+|++|+|.|.+.+.. ...+.|||.. ..+ .. ..++.+... . .....+|.|.
T Consensus 7 ~~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~--~-~~~~~sL~I~ 83 (263)
T 3iu4_H 7 SGPGLVAPSQSLSITCTVSGFSLSRYSVHWVRQPPGKGLEWLGMIWGGGSTDYNSALKSRLSISKD--N-SKSQVFLKMN 83 (263)
T ss_dssp ECCSEECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECTTSCEEECGGGTTCEEEEEE--G-GGTEEEEEEC
T ss_pred CCCEEEcCCCCEEEEEEeccccCCceEEEEEEECCCCCcEEEEEEeCCCcEeeCcccCCCEEEEec--C-CCCEEEEEEC
Confidence 3457899999999999997533 5679999732 111 00 122222211 1 2234579999
Q ss_pred ccCCCCCeEEEEEEEcCCC--------ceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCC--CeE
Q psy7036 75 DVIETDAGLYKVKAKNKMG--------EVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPA--PTV 144 (254)
Q Consensus 75 ~~~~~d~G~Y~C~~~~~~~--------~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~--~~~ 144 (254)
+++.+|+|.|.|.+.+..+ .......|.|... ...+|.+........+..|+.+.|.|.+.+.++ +.+
T Consensus 84 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~t~l~V~~~--~~~~P~v~~~~~~~~~~~g~~~~L~C~~~~~~P~~~~v 161 (263)
T 3iu4_H 84 SLQTDDTAMYYCARSGVREGRAQAWFAYWGQGTLVTVSAA--STKGPSVFPLAPSSKGSTSGTAALGCLVKDYFPEPVTV 161 (263)
T ss_dssp SCCGGGCEEEEEEEEECC---CEEEEEEECCCEEEEECSS--CCBCCEEEEECCCCCC----EEEEEEEEEEEBSSCCEE
T ss_pred CCCHHHCEEEEEEEEeCCCCccccccceeCCceEEEEecc--cCCCCEEEEccCccccccCCcEEEEEEEEeEeCCceEE
Confidence 9999999999999986531 1112345666421 112333332222223447899999999987532 579
Q ss_pred EEEECCEecccCC-cceEEEcCCC-CceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEE
Q psy7036 145 IWSHSGVQVKEDK-RHKFSIDKDG-HSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLN 205 (254)
Q Consensus 145 ~W~~~~~~~~~~~-~~~~~~~~~~-~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~ 205 (254)
.| ++..+.... ........++ +...+.|.|.....+| |.|+|.+.|..+.......+.
T Consensus 162 ~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~ 221 (263)
T 3iu4_H 162 SW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVE 221 (263)
T ss_dssp EE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEETTHHHH-CCCEEEEEEGGGTEEEEEECC
T ss_pred EE--CCcccCCceeecCceECCCCCEEEEEEEEECHhHcCC-CEEEEEEEECCCCcceeEEEc
Confidence 99 444332111 0111122222 2334678898888888 999999999877655554443
No 262
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.77 E-value=2e-17 Score=116.84 Aligned_cols=170 Identities=15% Similarity=0.205 Sum_probs=103.1
Q ss_pred eeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCC-----EEee-------eCCcceEEEeecCCcceEEEEEEeccC
Q psy7036 10 SFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGE-----TQLS-------EDTRTVMKTTPIGTNKYLVALELDDVI 77 (254)
Q Consensus 10 ~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~-----~~~~-------~~~~~~~~~~~~~~~~~~~~l~i~~~~ 77 (254)
.+.+.|..+.+.+|++|+|.|.+.+.. ..+.|||.+ ..+. ...++.+.. +........|.|.+++
T Consensus 3 ~v~q~p~~v~v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~--~~~~~~~~~L~I~~v~ 79 (207)
T 1ypz_E 3 QVEQSPSALSLHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAF--DSKERRYSTLHIRDAQ 79 (207)
T ss_dssp SEEESCSEEEEETTCCEEEEEEESSCC-SEEEEEEECTTSCCEEEEEESSEEEEETTEEEEE--CTTTCSEEEEEECSCC
T ss_pred ccEECCCeEEEccCCcEEEEEEEeCCC-eEEEEEEeCCCCCeEEEEEEccCCccCCCEEEEe--ccCCCCEEEEEECCCC
Confidence 356778888999999999999997543 479999843 1221 122333222 1112334589999999
Q ss_pred CCCCeEEEEEEEcCCC---------c--eEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeC-CC-CeE
Q psy7036 78 ETDAGLYKVKAKNKMG---------E--VAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQAD-PA-PTV 144 (254)
Q Consensus 78 ~~d~G~Y~C~~~~~~~---------~--~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~-~~~ 144 (254)
.+|+|.|.|.+.+..+ . ......|.|........+|. +.+..+ .+.|.|.+.+. |. +.+
T Consensus 80 ~~D~G~Y~C~~~~~~~~~p~~~~~~~~~~~~~t~L~V~~~~~~~~~P~-------v~~~~~-~~~l~C~~~g~~P~~~~v 151 (207)
T 1ypz_E 80 LEDSGTYFCAADTWHISEGYELGTDKLVFGQGTQVTVEPKSQPPAKPS-------VFIMKN-GTNVACLVKDFYPKEVTI 151 (207)
T ss_dssp GGGCEEEEEEEECBCCCTTCCCCCCCCEECCCEEEEEECCCCCCCCCE-------EEEEEE-TTEEEEEEEEESSSCCEE
T ss_pred HHHCEEEEEEEecCCcccccccccceeeecCccEEEEccCCCCCCCCe-------EEEeCC-CCeEEEEEeeEeCCCeEE
Confidence 9999999999987632 1 11245677753211111221 111111 26899999875 44 689
Q ss_pred EEEECCEecccCCcceEEEcCCCCceeeEEEEccCC-CCCceeEEEEEEcCCCc
Q psy7036 145 IWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVT-IEDAGKYKVTAKNELGE 197 (254)
Q Consensus 145 ~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~-~~d~G~y~C~~~~~~~~ 197 (254)
.|+++ ..+..... ......++ .+.+.... .+|.|.|+|.+.|..+.
T Consensus 152 ~W~~~-~~l~~~~~-~~~~~~~g-----~y~~~~~~~~~~~~~ytC~v~~~~~~ 198 (207)
T 1ypz_E 152 SLRSS-KKIVEFDP-AIVISPSG-----KYSAVKLGQYGDSNSVTCSVQHNSET 198 (207)
T ss_dssp EEECS-SEEEECCC-EEEECTTS-----SEEEEECEEESSTTTCEEEEEETTEE
T ss_pred EEecC-CcccCCcc-ceEEcCCC-----cEEEEEeecccCCCcEEEEEEECCcc
Confidence 99999 66543321 22223333 22332333 36789999999997653
No 263
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.77 E-value=8.4e-17 Score=124.53 Aligned_cols=179 Identities=20% Similarity=0.246 Sum_probs=120.6
Q ss_pred CCCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEE
Q psy7036 5 EDFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLY 84 (254)
Q Consensus 5 ~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 84 (254)
+..+|.|...+....+.+|+.+.|.|.+.|.|.+.++|++++..+......++.....+. ...|.|.+++..|+|.|
T Consensus 97 V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~---~~~L~i~~~~~~d~G~Y 173 (389)
T 2jll_A 97 IEYAPKFISNQTIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTGR---KMILEIAPTSDNDFGRY 173 (389)
T ss_dssp EEEEEEECCSCCEEEECTTCCEEEEECEEEESCCEEEEEETTEESSCTTCTTEEEEECSS---CEEEEECCCSTTSSEEE
T ss_pred EEeCCEEecCcceEEeccCCEEEEEEEEEecCCCeEEEEECCccCCcccCceEEEeccCC---EEEEEECCCChhhCEEE
Confidence 345677776666667899999999999999999999999999998765433333322222 23799999999999999
Q ss_pred EEEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeC----CCC--eEEEEECCEecccCCc
Q psy7036 85 KVKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQAD----PAP--TVIWSHSGVQVKEDKR 158 (254)
Q Consensus 85 ~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~----~~~--~~~W~~~~~~~~~~~~ 158 (254)
+|.+.|..|.......+.+...+ .+|.. .......+..+.|.|..... +.. .+.|.+++...
T Consensus 174 ~C~a~N~~G~~~~~~~l~v~~~P---~~P~~----~~~~~~~~~~~~l~w~~p~~~~g~pi~~y~v~~~~~~~~~----- 241 (389)
T 2jll_A 174 NCTATNHIGTRFQEYILALADVP---SSPYG----VKIIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVASEI----- 241 (389)
T ss_dssp EEEEEETTEEEEEEEEEEECCCC---CCCEE----EEEEEECSSCEEEEEECCSCCTTSCEEEEEEEEEETTCSC-----
T ss_pred EEEEEcCCCcEEEEEEEEecCCC---CCCcc----eEEeeccCCEEEEEEeCCCCCCCcceEEEEEEEEECCCcc-----
Confidence 99999999988777777764211 11110 11122235678888874221 221 35677665321
Q ss_pred ceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEE
Q psy7036 159 HKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNAT 201 (254)
Q Consensus 159 ~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~ 201 (254)
......... ...+.|.++...+.+.|+|.|.|..|....+
T Consensus 242 ~~~~~~~~~---~~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s 281 (389)
T 2jll_A 242 WKIVRSHGV---QTMVVLNNLEPNTTYEIRVAAVNGKGQGDYS 281 (389)
T ss_dssp CEEEECSTT---CSEEEECSCCTTCEEEEEEEEEESSCBCCCC
T ss_pred cEEeeccCC---cceEEECCccCCCEEEEEEEEEcCCccCCCC
Confidence 111111111 1279999999999999999999998865433
No 264
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=99.77 E-value=1.6e-17 Score=119.03 Aligned_cols=181 Identities=12% Similarity=0.164 Sum_probs=108.9
Q ss_pred CCceeecCCCeEEEEEEEeeC--CCCceEEEeCC-----EEe---ee-----------CCcceEEEeecCCcceEEEEEE
Q psy7036 15 PQLRQEDEGNRLIFECQLLCN--PKPDIVWFRGE-----TQL---SE-----------DTRTVMKTTPIGTNKYLVALEL 73 (254)
Q Consensus 15 ~~~~~v~~g~~v~l~C~~~~~--~~~~v~W~~~~-----~~~---~~-----------~~~~~~~~~~~~~~~~~~~l~i 73 (254)
+..+.+.+|++|+|.|.+.+. ....+.|||.. ..+ .. ..++.+.... .....+|.|
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~---~~~~~sL~I 83 (226)
T 3mlr_H 7 SGGEVKQPGQSLKISCKSSGYNFLDSWIGWVRQIPGKGLEWIGIIYPDDSDAHYSPSFEGQVTMSVDK---SISTAYLQW 83 (226)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTBTTBEEEEEG---GGTEEEEEE
T ss_pred CCCEEEecCCCEEEEEEecCccccCCEEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEecC---CCCEEEEEE
Confidence 346789999999999999653 35679999832 111 00 1222222211 123457999
Q ss_pred eccCCCCCeEEEEEEEcCCC-------c--eEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeC-C-CC
Q psy7036 74 DDVIETDAGLYKVKAKNKMG-------E--VAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQAD-P-AP 142 (254)
Q Consensus 74 ~~~~~~d~G~Y~C~~~~~~~-------~--~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-~-~~ 142 (254)
.+++.+|+|.|.|.+.+..+ . ......|.|... ...+|.+........+..|..+.|.|.+.+. | .+
T Consensus 84 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~t~l~V~~~--~~~~P~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~ 161 (226)
T 3mlr_H 84 TTLQASDTGKYFCTRLYLFEGAQSSNAFDLWGQGTMILVSSG--TTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV 161 (226)
T ss_dssp SSCCGGGCEEEEEEEEEEEESSSEEEEEEEECCCEEEEECCC--CCBCCEEEEEEEEECSTTSSEEEEEEEEEEEBSSCC
T ss_pred CCCCcccCEEEEEeEccCCCcccccchhhhhCCccEEeeccC--CCCCCcEEEecCcccccCCCCEEEEEEEEEEECCCe
Confidence 99999999999999976421 0 112335565421 1123333322222334578999999999874 4 35
Q ss_pred eEEEEECCEecccCC-cceEEEcCCC-CceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEE
Q psy7036 143 TVIWSHSGVQVKEDK-RHKFSIDKDG-HSYFASLEIIDVTIEDAGKYKVTAKNELGESNATIS 203 (254)
Q Consensus 143 ~~~W~~~~~~~~~~~-~~~~~~~~~~-~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~ 203 (254)
.+.| ++..+.... ........++ +...+.|.|.....+| |.|+|.+.|..+.......
T Consensus 162 ~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~ 221 (226)
T 3mlr_H 162 TVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKK 221 (226)
T ss_dssp EEEE--GGGTCCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEE
T ss_pred EEEE--CCccccCCeEeCCcEECCCCCEEEEEEEEECHhHcCC-CeEEEEEEECCCCcCeEEE
Confidence 7999 443332111 0111122222 3345689999988888 9999999998776554443
No 265
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.76 E-value=1.5e-17 Score=116.09 Aligned_cols=116 Identities=22% Similarity=0.513 Sum_probs=92.9
Q ss_pred eeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceE
Q psy7036 121 IRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNA 200 (254)
Q Consensus 121 ~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~ 200 (254)
...+.+|+.+.|.|.+.+.|.+.+.|++++..+.......+ ..++ ..|.|.+++.+|.|.|+|.+.|..+....
T Consensus 13 ~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~--~~~~----~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~ 86 (192)
T 2va4_A 13 NATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYIL--KGSN----TELTVRNIINSDGGPYVCRATNKAGEDEK 86 (192)
T ss_dssp EEETTSCCCEEEECEEECSSCCEEEEEETTEECCCSSSEEE--ETTT----TEEEECSCCGGGCEEEEEEEEETTEEEEE
T ss_pred EEEEecCCCEEEEEeeccCCCCeEEEEECCeEcCCCccEEE--eCCe----eEEEEecCChhcCcEEEEEEEccccccce
Confidence 45678899999999999999999999999998876544332 2222 27999999999999999999999888777
Q ss_pred EEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEeccCCCceeC
Q psy7036 201 TISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEPEPTISW 254 (254)
Q Consensus 201 ~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p~p~~~W 254 (254)
.+.|.|.. +|.+...+ ...+.+|+ .+.|.|.+.|+|.|.++|
T Consensus 87 ~~~l~V~~----------~p~~~~~~-~~~~~~g~-~v~l~C~~~~~p~~~v~W 128 (192)
T 2va4_A 87 QAFLQVFV----------QPHIIQLK-NETTYENG-QVTLVCDAEGEPIPEITW 128 (192)
T ss_dssp EEEEEEEE----------EEEEEEEC-CEEECTTS-EEEEEEEEEEESCCEEEE
T ss_pred EEEEEEEc----------cCcccccC-cceEEeCC-eEEEEEEecCCCCCcEEE
Confidence 77777764 44454333 33566788 999999999999999998
No 266
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.76 E-value=1.9e-17 Score=115.26 Aligned_cols=121 Identities=26% Similarity=0.473 Sum_probs=94.9
Q ss_pred CCCeeeecCCCeEEEEEEEeeCCCCeEEEEE-CCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCC
Q psy7036 118 KPSIRQEDDGKRLLFECRIQADPAPTVIWSH-SGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELG 196 (254)
Q Consensus 118 ~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~ 196 (254)
.+....+.+|+.+.|.|.+.+.|. .+.|++ ++..+....+..+.... . .+.|.|.+++.+|+|.|+|.+.|..+
T Consensus 8 ~~~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~~~~~~~~~~--~--~~~L~i~~~~~~d~G~Y~C~~~~~~g 82 (189)
T 2v44_A 8 SLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEG--V--RSRLTIYNANIEDAGIYRCQATDAKG 82 (189)
T ss_dssp SCSEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCCCCSSEEEEEET--T--EEEEEECSCCGGGCEEEEEEEECTTS
T ss_pred cCCceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccCCCceEEEECCC--C--eEEEEEccCCcccCeEEEEEEEeCCC
Confidence 345667889999999999999877 999999 67666544443333222 1 13899999999999999999999988
Q ss_pred cc-eEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEeccCCCceeC
Q psy7036 197 ES-NATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEPEPTISW 254 (254)
Q Consensus 197 ~~-~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p~p~~~W 254 (254)
.. ...+.+.|.. +|.+...+....+.+|+ .+.|.|.+.|.|.|.++|
T Consensus 83 ~~~~~~~~l~v~~----------~p~~~~~~~~~~~~~g~-~~~l~C~~~g~p~p~v~W 130 (189)
T 2v44_A 83 QTQEATVVLEIYQ----------KLTFREVVSPQEFKQGE-DAEVVCRVSSSPAPAVSW 130 (189)
T ss_dssp CEEEEEEEEEEEC----------CCEEESCCCSEEEETTS-CEEECCEEECSSCCEEEE
T ss_pred CcEEEEEEEEEec----------CCceeecCCcEEEeCCC-CEEEEEEECcCCCCcEEE
Confidence 65 5667777764 45566556666788899 999999999999999998
No 267
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.76 E-value=5.6e-18 Score=105.45 Aligned_cols=96 Identities=27% Similarity=0.385 Sum_probs=80.5
Q ss_pred CCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEE
Q psy7036 6 DFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYK 85 (254)
Q Consensus 6 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 85 (254)
..+|.|...|....+.+|++++|.|.+.|.|.+.+.|++++..+............. ....|.|.+++..|+|.|+
T Consensus 3 ~~~P~~~~~p~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~----~~~~L~i~~v~~~D~G~Y~ 78 (100)
T 2kdg_A 3 MGPPRFIQVPENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEK----GLHSLIFEVVRASDAGAYA 78 (100)
T ss_dssp CEEEECCCCCCCEEEETTCCEEEEEECEEESCCEEEEEETTEEECCCSSSCEEEETT----TEEEEEESSCCGGGCEEEE
T ss_pred CCCCeEEeCCCCEEecCCCEEEEEEEEEeeCCCEEEEEECCEECcCCCcEEEEEcCC----CeEEEEECCCCcccCEEEE
Confidence 357888888989999999999999999999999999999999987765544433222 2247999999999999999
Q ss_pred EEEEcCCCceEEEEEEEEec
Q psy7036 86 VKAKNKMGEVAASINLNFSR 105 (254)
Q Consensus 86 C~~~~~~~~~~~~~~l~v~~ 105 (254)
|.+.|..|.....+.|.|..
T Consensus 79 C~a~n~~g~~~~~~~l~V~~ 98 (100)
T 2kdg_A 79 CVAKNRAGEATFTVQLDVLA 98 (100)
T ss_dssp EEEEETTEEEEEEEEEEEEC
T ss_pred EEEEcCCCeEEEEEEEEEEe
Confidence 99999999988888888863
No 268
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.76 E-value=4.8e-18 Score=106.68 Aligned_cols=94 Identities=27% Similarity=0.459 Sum_probs=77.6
Q ss_pred CCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEE
Q psy7036 111 LAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVT 190 (254)
Q Consensus 111 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~ 190 (254)
.||.+...+....+.+|+.+.|.|.+.|.|.+.+.|+|++..+....+..+..... ...|.|.+++.+|+|.|+|.
T Consensus 12 ~pP~f~~~p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~~~~~~~~~~~----~~~L~I~~v~~~D~G~Y~C~ 87 (107)
T 3knb_B 12 SPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGA----EHGLLLTAALPTDAGVYVCR 87 (107)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETT----EEEEEESSCCGGGCEEEEEE
T ss_pred CCCEEEeCCCcEEEeCCCcEEEEEEEEEecCCEEEEEECcccccceeeEEEeecCc----eEEEEEecCChhhCEEEEEE
Confidence 45666666677888999999999999999999999999999987665544433222 23799999999999999999
Q ss_pred EEcCCCcceEEEEEEEec
Q psy7036 191 AKNELGESNATISLNFDS 208 (254)
Q Consensus 191 ~~~~~~~~~~~~~~~v~~ 208 (254)
|.|..|....++.|.|..
T Consensus 88 a~N~~G~~~~~~~l~V~~ 105 (107)
T 3knb_B 88 ARNAAGEAYAAAAVTVLE 105 (107)
T ss_dssp EEETTEEEEEEEEEEEEC
T ss_pred EEECCCEEEEEEEEEEEc
Confidence 999999988888888864
No 269
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=99.76 E-value=5.5e-17 Score=118.46 Aligned_cols=187 Identities=11% Similarity=0.170 Sum_probs=110.1
Q ss_pred CCceeecCCCeEEEEEEEeeC--CCCceEEEeCC-----EEe-e-----------eCCcceEEEeecCCcceEEEEEEec
Q psy7036 15 PQLRQEDEGNRLIFECQLLCN--PKPDIVWFRGE-----TQL-S-----------EDTRTVMKTTPIGTNKYLVALELDD 75 (254)
Q Consensus 15 ~~~~~v~~g~~v~l~C~~~~~--~~~~v~W~~~~-----~~~-~-----------~~~~~~~~~~~~~~~~~~~~l~i~~ 75 (254)
+....+.+|++|+|.|.+.+. ....+.|||.. ..+ . .....++....+. .....+|.|.+
T Consensus 30 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~-~~~~~sL~I~~ 108 (256)
T 3sob_H 30 SGGGLVQPGGSLRLSCAASGFTFTNSYIHWVRQAPGKGLEWVGWITPYGGYTNYADSVKGRFTISADT-SKNTAYLQMNS 108 (256)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCCEEEEEEETTTTEEEECTTTTTTEEEEEEG-GGTEEEEEECS
T ss_pred cCcEEEcCCCCEEEEEEeeccccCCCEEEEEEECCCCCcEEEEEEecCCCceecCCCCCCcEEEEEeC-CCCEEEEEECC
Confidence 345679999999999999753 34679999732 111 0 0011122221111 22345799999
Q ss_pred cCCCCCeEEEEEEEcCCC-----------ceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeC-C-CC
Q psy7036 76 VIETDAGLYKVKAKNKMG-----------EVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQAD-P-AP 142 (254)
Q Consensus 76 ~~~~d~G~Y~C~~~~~~~-----------~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-~-~~ 142 (254)
++.+|+|.|.|.+.+..+ .......|.|... ...+|.+........+..|+.++|.|.+.+. | ..
T Consensus 109 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~--~~~~P~i~~~~~~~~~~~g~~v~L~C~~~~~~p~~~ 186 (256)
T 3sob_H 109 LRAEDTAVYYCARGSGHVNAVKNYGYVMDYWGQGTLVTVSSA--STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV 186 (256)
T ss_dssp CCGGGCEEEEEEEESSCTTCSSCCTTSEEEECCCEEEEECSS--CCBCCEEEEECCC-----TTEEEEEEEEEEEBSSCC
T ss_pred CCcccCEEEEEEEecCCCccccccccceeEECCCEEEEEecC--CCCCCEEEEECCCcccccCCcEEEEEEEEEEECCCe
Confidence 999999999999986431 1122345666421 1133433322222335579999999999874 4 34
Q ss_pred eEEEEECCEecccCCc-ceEEEcCCC-CceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEe
Q psy7036 143 TVIWSHSGVQVKEDKR-HKFSIDKDG-HSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFD 207 (254)
Q Consensus 143 ~~~W~~~~~~~~~~~~-~~~~~~~~~-~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~ 207 (254)
.+.| ++..+..... .......++ +...+.|.|.....+| |.|+|.+.|..+.......+.+.
T Consensus 187 ~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-~~ytC~v~~~~~~~~~~~~~~~~ 250 (256)
T 3sob_H 187 TVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEPK 250 (256)
T ss_dssp EEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEECCCC
T ss_pred EEEE--CCcccCCCeEeCCceeCCCCCEEEEEEEEECHHHcCC-ceEEEEEEeCCCCcceEEEeccc
Confidence 6999 5544332111 111122222 2344679999988889 99999999988776666555443
No 270
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.75 E-value=1.6e-17 Score=103.21 Aligned_cols=95 Identities=19% Similarity=0.302 Sum_probs=80.7
Q ss_pred CCCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEE
Q psy7036 5 EDFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLY 84 (254)
Q Consensus 5 ~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 84 (254)
+..+|.|...+....+.+|+++.|.|.+.+.|.+.+.|++++..+....++.+... + ....|.|.+++..|+|.|
T Consensus 3 ~~~~P~i~~~~~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~--~---~~~~L~i~~~~~~d~G~Y 77 (99)
T 3puc_A 3 ISSKPVIVTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQGGKYKLSED--K---GGFFLEIHKTDTSDSGLY 77 (99)
T ss_dssp CCEEEEEEECCCCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCSSSSEEEEEE--T---TEEEEEECSCCGGGCEEE
T ss_pred CCCCCEEEecCccEEEeCCCcEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEe--C---CEEEEEECCCCcccCEEE
Confidence 45678999999999999999999999999999999999999999877666554322 1 223799999999999999
Q ss_pred EEEEEcCCCceEEEEEEEEe
Q psy7036 85 KVKAKNKMGEVAASINLNFS 104 (254)
Q Consensus 85 ~C~~~~~~~~~~~~~~l~v~ 104 (254)
+|.+.|..|.....+.|.|.
T Consensus 78 ~C~a~n~~g~~~~~~~l~V~ 97 (99)
T 3puc_A 78 TCTVKNSAGSVSSSCKLTIK 97 (99)
T ss_dssp EEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEeCCCcEeEEEEEEEE
Confidence 99999999988888888774
No 271
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.75 E-value=2e-17 Score=115.09 Aligned_cols=126 Identities=24% Similarity=0.472 Sum_probs=91.1
Q ss_pred CccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEE
Q psy7036 113 PTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAK 192 (254)
Q Consensus 113 ~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~ 192 (254)
|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+......++....++ .|.|.+++.+|.|.|+|.+.
T Consensus 3 ~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~-----~L~i~~~~~~d~G~Y~C~~~ 77 (189)
T 2v5t_A 3 LTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANN-----NLQILNINKSDEGIYRCEGR 77 (189)
T ss_dssp CEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEC-----CBCCCTTEEECTTS-----CEEETTCCGGGCEEEEEEEE
T ss_pred ceeeccCCCEEEeCCCcEEEEEEEcCCCCCEEEEEECCccceeccCCeEEEecCC-----CEEEeeCCHhHCcEEEEEEE
Confidence 3444555667788999999999999999999999999988765444445444444 69999999999999999999
Q ss_pred cCCCcce--EEEEEEEecCCCCCCCCCCCCeeecCCc--cccccCCCCcEEEEEEEeccCCCceeC
Q psy7036 193 NELGESN--ATISLNFDSDDAPVPGEGTKPVFTERPV--TKQSDDDLNDIVIECRLVGEPEPTISW 254 (254)
Q Consensus 193 ~~~~~~~--~~~~~~v~~~~~~~~~~~~~p~~~~~~~--~~~~~~g~~~~~l~C~~~~~p~p~~~W 254 (254)
+..+... ..+.+.+.. +|.+...+. ...+.+|+ .+.|.|.+.|.|.|.+.|
T Consensus 78 ~~~~~~~~~~~~~l~v~~----------~p~~~~~~~~~~~~~~~g~-~v~l~C~~~g~p~~~v~W 132 (189)
T 2v5t_A 78 VEARGEIDFRDIIVIVNV----------PPAISMPQKSFNATAERGE-EMTFSCRASGSPEPAISW 132 (189)
T ss_dssp ETTTTEEEEEEEEEEEEE----------EEEEECSCCEEEEETTSCC-CEEEECEEEEESCCEEEE
T ss_pred EcCCCceEEEEEEEEecC----------CCCcccccccccccccCCC-cEEEEEEEccCCCCeEEE
Confidence 9875433 344555543 344443332 44667888 999999999999999998
No 272
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.75 E-value=2.3e-17 Score=102.42 Aligned_cols=94 Identities=24% Similarity=0.399 Sum_probs=78.1
Q ss_pred CCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEE
Q psy7036 7 FAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKV 86 (254)
Q Consensus 7 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 86 (254)
.+|.|...+....+.+|++++|.|.+.+.|.+.+.|++++..+........ ... ......|.|.+++..|+|.|+|
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~~~~~~-~~~---~~~~~~L~i~~~~~~D~G~Y~C 79 (99)
T 1u2h_A 4 APPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFA-EEA---EGGLCRLRILAAERGDAGFYTC 79 (99)
T ss_dssp EEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCBTTEEE-EEC---GGGEEEEEESSCCGGGCEEEEE
T ss_pred CCCEEEEcCCceEecCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCCEEE-EEC---CCCEEEEEEccCCcCCCEEEEE
Confidence 478999999999999999999999999999999999999998875543222 121 1223479999999999999999
Q ss_pred EEEcCCCceEEEEEEEEe
Q psy7036 87 KAKNKMGEVAASINLNFS 104 (254)
Q Consensus 87 ~~~~~~~~~~~~~~l~v~ 104 (254)
.+.|..|.....+.|.|.
T Consensus 80 ~a~N~~g~~~~~~~l~V~ 97 (99)
T 1u2h_A 80 KAVNEYGARQCEARLEVR 97 (99)
T ss_dssp EEEETTEEEEEEEEEEEE
T ss_pred EEEECCCceeEEEEEEEE
Confidence 999999998888888875
No 273
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.74 E-value=6.3e-17 Score=101.02 Aligned_cols=97 Identities=26% Similarity=0.404 Sum_probs=75.4
Q ss_pred CCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEE
Q psy7036 6 DFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYK 85 (254)
Q Consensus 6 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 85 (254)
.++|.+..... ...|+.+.|.|.+.|.|.|.++|+|+|..+....+........+.......|.|.+++..|+|.|+
T Consensus 2 ~~pP~i~~~~~---~~~~~~~~~~c~v~G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 78 (103)
T 1wwb_X 2 HFAPTITFLES---PTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYT 78 (103)
T ss_dssp CCCCCCCCCCC---CCCCCEEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEE
T ss_pred CCCCEEEeccC---ceECcEEEEEEEEEEeCCCEEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEEE
Confidence 45777643222 346889999999999999999999999998876543333222233334557999999999999999
Q ss_pred EEEEcCCCceEEEEEEEEec
Q psy7036 86 VKAKNKMGEVAASINLNFSR 105 (254)
Q Consensus 86 C~~~~~~~~~~~~~~l~v~~ 105 (254)
|.+.|..|.....+.|.|..
T Consensus 79 C~A~N~~G~~~~~~~l~V~~ 98 (103)
T 1wwb_X 79 LIAKNEYGKDEKQISAHFMG 98 (103)
T ss_dssp EEEECSSCEEEEEEEECCSC
T ss_pred EEEEeCCCcEeEEEEEEECC
Confidence 99999999999999888863
No 274
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.74 E-value=3.3e-17 Score=104.64 Aligned_cols=97 Identities=30% Similarity=0.473 Sum_probs=80.5
Q ss_pred CCCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeC-CcceEEEeecCCcceEEEEEEeccCCCCCeE
Q psy7036 5 EDFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSED-TRTVMKTTPIGTNKYLVALELDDVIETDAGL 83 (254)
Q Consensus 5 ~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 83 (254)
...+|.|+..|....+.+|++++|.|.+.|.|.+.+.|++++..+... .++.+.. .+ .....|.|.+++..|+|.
T Consensus 12 ~~~~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~--~~--~~~~~L~I~~v~~~D~G~ 87 (116)
T 2kkq_A 12 HKRAPMFIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQ--DN--TGRVTLLIKDVNKKDAGW 87 (116)
T ss_dssp CCBCCCBSSCCCCEEEETTEEEEEEEEBCCBSCCEEEEEETTEECCCCBTTEEEEE--CT--TCEEEEEEEEECGGGCEE
T ss_pred CCCCCeEEeCCCcEEEeCCCcEEEEEEEeccCCCEEEEEECCEECcCCCCeEEEEe--CC--CCeEEEEECCCCcccCEE
Confidence 345889999999999999999999999999999999999999988753 3333322 11 134479999999999999
Q ss_pred EEEEEEcCCCceEEEEEEEEec
Q psy7036 84 YKVKAKNKMGEVAASINLNFSR 105 (254)
Q Consensus 84 Y~C~~~~~~~~~~~~~~l~v~~ 105 (254)
|+|.+.|..|.....+.|.|..
T Consensus 88 Y~C~a~N~~G~~~~~~~l~V~~ 109 (116)
T 2kkq_A 88 YTVSAVNEAGVTTCNTRLDVTA 109 (116)
T ss_dssp EEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEEEcCCCeEEEEEEEEEeC
Confidence 9999999999988888888874
No 275
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.74 E-value=2.8e-17 Score=102.26 Aligned_cols=96 Identities=24% Similarity=0.470 Sum_probs=78.4
Q ss_pred CCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEE
Q psy7036 6 DFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYK 85 (254)
Q Consensus 6 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 85 (254)
..+|.|...+....+.+|+++.|.|.+.+.|.+.+.|++++..+......++...... ....|.|.+++..|+|.|+
T Consensus 3 ~~pP~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~---~~~~L~i~~v~~~D~G~Y~ 79 (100)
T 3irg_A 3 GIPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTD---DLTTLIIMDVQKQDGGLYT 79 (100)
T ss_dssp CEEEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECS---SEEEEEESSCCGGGCEEEE
T ss_pred CCCCeeecCCCcEEEcCCCcEEEEEEEEEcCCCceEEEECCEEeecCCCCEEEEEecC---CEEEEEEeecCcccCEEEE
Confidence 4578888889889999999999999999999999999999998864333333322222 2348999999999999999
Q ss_pred EEEEcCCCceEEEEEEEEe
Q psy7036 86 VKAKNKMGEVAASINLNFS 104 (254)
Q Consensus 86 C~~~~~~~~~~~~~~l~v~ 104 (254)
|.+.|..|.....+.|.|.
T Consensus 80 C~a~n~~g~~~~~~~l~V~ 98 (100)
T 3irg_A 80 LSLGNEFGSDSATVNIHIR 98 (100)
T ss_dssp EEEEETTEEEEEEEEEEEE
T ss_pred EEEEeCCCcEEEEEEEEEE
Confidence 9999999988888888774
No 276
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.74 E-value=1.1e-17 Score=120.17 Aligned_cols=124 Identities=23% Similarity=0.456 Sum_probs=95.5
Q ss_pred CeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceE-EEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcc
Q psy7036 120 SIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKF-SIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGES 198 (254)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~ 198 (254)
....+.+|+.+.|.|.+.+.|.+.+.|++++..+........ ...... ..|.|.+++.+|+|.|+|.+.|..+..
T Consensus 27 ~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~----~~L~i~~~~~~d~G~Y~C~~~n~~~~~ 102 (231)
T 3ojm_B 27 RLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQH----WSLIMESVVPSDKGNYTCVVENEYGSI 102 (231)
T ss_dssp SCEEEETTSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGG----TEEEECSCCGGGCEEEEEEEEETTEEE
T ss_pred eeEEEccCCCEEEEEecccCCCCeEEEEECCccccccccccceeeecCc----ceEEEecCCcccCEEEEEEEecccCcc
Confidence 556788999999999999999999999999998764433211 111111 279999999999999999999998888
Q ss_pred eEEEEEEEecCCCCCCCCCCCCeeec-CCccccccCCCCcEEEEEEEeccCCCceeC
Q psy7036 199 NATISLNFDSDDAPVPGEGTKPVFTE-RPVTKQSDDDLNDIVIECRLVGEPEPTISW 254 (254)
Q Consensus 199 ~~~~~~~v~~~~~~~~~~~~~p~~~~-~~~~~~~~~g~~~~~l~C~~~~~p~p~~~W 254 (254)
.....+.|..... .+|.+.. .+....+..|+ .+.|.|.+.+.|.|.+.|
T Consensus 103 ~~~~~l~V~~~~~------~~p~~~~~~~~~~~~~~g~-~~~l~C~~~~~p~p~v~W 152 (231)
T 3ojm_B 103 NHTYHLDVVERSR------HRPILQAGLPANASTVVGG-DVEFVCKVYSDAQPHIQW 152 (231)
T ss_dssp EEEEEEEEECCCC------CCCEECTTCSCCEEEETTC-CEEEECCEECSSCCEEEE
T ss_pred cccEEEEEEcCCC------CCCceeeccCCceEEEeCC-cEEEEEEEecCCCCEEEE
Confidence 7788888764321 1333333 35666778899 999999999999999998
No 277
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.74 E-value=1.5e-17 Score=102.01 Aligned_cols=89 Identities=20% Similarity=0.358 Sum_probs=74.0
Q ss_pred CCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCC--EEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEE
Q psy7036 8 APSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGE--TQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYK 85 (254)
Q Consensus 8 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 85 (254)
+|.|...+....+.+|+.+.|.|.+.|.|.+.+.|++++ ..+..... .... .....|.|.+++..|+|.|+
T Consensus 2 ~P~i~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~--~~~~-----~~~~~L~i~~~~~~D~G~Y~ 74 (93)
T 1wit_A 2 KPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPELL--VDAK-----SSTTSIFFPSAKRADSGNYK 74 (93)
T ss_dssp CCEECCCCCEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTTSE--EEEE-----TTEEEEECTTBCGGGCEEEE
T ss_pred CCeEEcCCCceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCcEE--EEec-----CCEEEEEECCCChhcCEEEE
Confidence 688888888889999999999999999999999999999 77654322 2211 12347999999999999999
Q ss_pred EEEEcCCCceEEEEEEEE
Q psy7036 86 VKAKNKMGEVAASINLNF 103 (254)
Q Consensus 86 C~~~~~~~~~~~~~~l~v 103 (254)
|.+.|..|.....+.|.|
T Consensus 75 C~a~N~~G~~~~~~~l~V 92 (93)
T 1wit_A 75 LKVKNELGEDEAIFEVIV 92 (93)
T ss_dssp EEEEETTEEEEEEEEEEE
T ss_pred EEEEcCCCeEEEEEEEEE
Confidence 999999998888887776
No 278
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.74 E-value=6.3e-17 Score=117.03 Aligned_cols=125 Identities=19% Similarity=0.454 Sum_probs=96.3
Q ss_pred CCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcc-eEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCc
Q psy7036 119 PSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRH-KFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGE 197 (254)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~ 197 (254)
.....+.+|+.+.|.|.+.+.|.+.+.|++++..+...... ........ ..|.|.+++.+|.|.|+|.+.|..+.
T Consensus 22 ~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~----~~L~i~~v~~~d~G~Y~C~~~~~~~~ 97 (241)
T 3grw_A 22 KKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQ----WSLVMESVVPSDRGNYTCVVENKFGS 97 (241)
T ss_dssp CCEEEEETTSEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEEEGGG----TEEEECSCCGGGCEEEEEEEEETTEE
T ss_pred CcceEEcCCCeEEEEEEecCCCCceeEEEECCcccCCCCcccceeeeccc----eEEEEEeCCcccCEEEEEEEeecCCc
Confidence 34577889999999999999999999999999987644322 11111111 27999999999999999999999888
Q ss_pred ceEEEEEEEecCCCCCCCCCCCCe-eecCCccccccCCCCcEEEEEEEeccCCCceeC
Q psy7036 198 SNATISLNFDSDDAPVPGEGTKPV-FTERPVTKQSDDDLNDIVIECRLVGEPEPTISW 254 (254)
Q Consensus 198 ~~~~~~~~v~~~~~~~~~~~~~p~-~~~~~~~~~~~~g~~~~~l~C~~~~~p~p~~~W 254 (254)
......+.|....+. +|. +...+....+.+|+ .+.|.|.+.+.|.|.+.|
T Consensus 98 ~~~~~~l~V~~~~~~------~~~~~~~~~~~~~~~~g~-~v~L~C~~~~~p~p~v~W 148 (241)
T 3grw_A 98 IRQTYTLDVLERSPH------RPILQAGLPANQTAVLGS-DVEFHCKVYSDAQPHIQW 148 (241)
T ss_dssp EEEEEEEEEECCCCC------CCEEEECTTCSEECCTTC-CEEEEEEEECSSCCEEEE
T ss_pred eEEEEEEEEeccCCC------CceeecCCCccceecCCC-EEEEEEEEecCCCCEEEE
Confidence 888888887653221 233 33345666788898 999999999999999998
No 279
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.73 E-value=1.3e-17 Score=118.80 Aligned_cols=132 Identities=25% Similarity=0.521 Sum_probs=97.7
Q ss_pred CCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCc--ceEEEcCCCCceeeEEEEccCCCCCceeEE
Q psy7036 111 LAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKR--HKFSIDKDGHSYFASLEIIDVTIEDAGKYK 188 (254)
Q Consensus 111 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~ 188 (254)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+..... ..+.. .++ .....+.|.+++.+|+|.|+
T Consensus 8 ~~P~i~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~-~~~-~~~~~l~i~~v~~~d~G~Y~ 85 (217)
T 2vr9_A 8 QSPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQF-KDG-ALFFYRTMQGKKEQDGGEYW 85 (217)
T ss_dssp CCCEEEECCCCEEECTTSCEEECCEEECSSCCEEEEEETTEECCCSSSSSSEEEC-TTS-CEEESSCCBSSSCBCCEEEE
T ss_pred CCCEEecCCCceEEeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCCccceeEEe-cCC-ceEEEEEeccCCcccCceEE
Confidence 566777777778899999999999999999999999999998865432 22222 222 11223478889999999999
Q ss_pred EEEEcCCCcc-eEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEE-eccCCCceeC
Q psy7036 189 VTAKNELGES-NATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRL-VGEPEPTISW 254 (254)
Q Consensus 189 C~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~-~~~p~p~~~W 254 (254)
|.+.|..|.. .....+.|... +|.+...+....+.+|+ .+.|.|.+ .+.|.|.++|
T Consensus 86 C~~~n~~g~~~~~~~~l~v~~~---------~~~~~~~~~~~~~~~g~-~v~l~C~~~~g~p~~~v~W 143 (217)
T 2vr9_A 86 CVAKNRVGQAVSRHASLQIAVL---------RDDFRVEPKDTRVAKGE-TALLECGPPKGIPEPTLIW 143 (217)
T ss_dssp EEEEETTEEEECCCEEEEECEE---------CCSCSBCCCCEEECTTS-CEEECCBCCCEESCCEEEE
T ss_pred EEEecCCCccccccceEEEEEe---------CCCcEECCCccEEcCCC-eEEEEEECCCCCCCCeEEE
Confidence 9999988765 33444555421 23344455666778899 99999999 8999999998
No 280
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.73 E-value=5e-17 Score=109.26 Aligned_cols=98 Identities=22% Similarity=0.422 Sum_probs=83.0
Q ss_pred CCCCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeE
Q psy7036 4 AEDFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGL 83 (254)
Q Consensus 4 ~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 83 (254)
.+..+|.|...+....+.+|++++|.|.+.|.|.+.+.|+|++..+....++.+.... .....|.|.+++..|+|.
T Consensus 37 ~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~~~~~~~~~~----~~~~~L~I~~v~~~D~G~ 112 (154)
T 1fhg_A 37 KPHVKPYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDE----EGNCSLTISEVCGDDDAK 112 (154)
T ss_dssp CCCEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEECT----TCEEEEEESSCCGGGCEE
T ss_pred cCCCCCeEEccCCcEEEeCCCeEEEEEEEEEecCCEEEEEECCEECCCCCcEEEEECC----CCeEEEEECCCChhcCEE
Confidence 4456899999999999999999999999999999999999999998776665544321 123489999999999999
Q ss_pred EEEEEEcCCCceEEEEEEEEec
Q psy7036 84 YKVKAKNKMGEVAASINLNFSR 105 (254)
Q Consensus 84 Y~C~~~~~~~~~~~~~~l~v~~ 105 (254)
|+|.+.|..|.....+.|.|..
T Consensus 113 Y~C~a~N~~G~~~~~~~l~V~~ 134 (154)
T 1fhg_A 113 YTCKAVNSLGEATCTAELLVET 134 (154)
T ss_dssp EEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEEEECCCeEEEEEEEEEeC
Confidence 9999999999988888888873
No 281
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.73 E-value=3.4e-17 Score=103.18 Aligned_cols=95 Identities=27% Similarity=0.449 Sum_probs=80.1
Q ss_pred CCCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEE
Q psy7036 5 EDFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLY 84 (254)
Q Consensus 5 ~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 84 (254)
...+|.|...+....+.+|++++|.|.+.+.|.+.+.|++++..+....++.+... ...+.|.|.+++..|+|.|
T Consensus 10 ~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~-----~~~~~L~i~~~~~~D~G~Y 84 (107)
T 3irg_B 10 QGSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPAD-----GAEHGLLLTAALPTDAGVY 84 (107)
T ss_dssp CCEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEE-----TTEEEEEESSCCGGGCEEE
T ss_pred CCCCCeeEcCCccEEEeCCCeEEEEEEEeecCCCEEEEEECCeECCCCCcEEEEeC-----CCEEEEEEccCCHHhCEEE
Confidence 34588999999999999999999999999999999999999998876655443221 1233799999999999999
Q ss_pred EEEEEcCCCceEEEEEEEEe
Q psy7036 85 KVKAKNKMGEVAASINLNFS 104 (254)
Q Consensus 85 ~C~~~~~~~~~~~~~~l~v~ 104 (254)
+|.+.|..|.....+.|.|.
T Consensus 85 ~C~a~n~~g~~~~~~~l~V~ 104 (107)
T 3irg_B 85 VCRARNAAGEAYAAAAVTVL 104 (107)
T ss_dssp EEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEcCCCcEEEEEEEEEE
Confidence 99999999988888888886
No 282
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.73 E-value=2.6e-17 Score=102.10 Aligned_cols=91 Identities=12% Similarity=0.220 Sum_probs=75.7
Q ss_pred CCCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEE
Q psy7036 5 EDFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLY 84 (254)
Q Consensus 5 ~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 84 (254)
...+|.|...+.+..+.+|+++.|.|.+ .|.+.++|+|+|..+....++.+... + ..+.|.|.+++.+|+|.|
T Consensus 4 ~~~p~~~~~~~~~~~v~~G~~v~l~C~v--~p~p~v~W~k~g~~l~~~~r~~i~~~--~---~~~~L~I~~v~~~D~G~Y 76 (100)
T 2yuz_A 4 GSSGLKILTPLTDQTVNLGKEICLKCEI--SENIPGKWTKNGLPVQESDRLKVVQK--G---RIHKLVIANALTEDEGDY 76 (100)
T ss_dssp SSCCCCCSBCCCCEEEETTSCCCEEEEC--SSCCCEEEEETTEECCCCSSEEEEEC--S---SEEEEEESSCCGGGCSEE
T ss_pred CCCCCEEeccCCceEEcCCCCEEEEEEe--CCCCeEEEEECCEECCCCCcEEEEEe--C---CEEEEEECCCChhhCEEE
Confidence 3457889999999999999999999999 78899999999999987766655432 1 234799999999999999
Q ss_pred EEEEEcCCCceEEEEEEEEe
Q psy7036 85 KVKAKNKMGEVAASINLNFS 104 (254)
Q Consensus 85 ~C~~~~~~~~~~~~~~l~v~ 104 (254)
+|.+.|. ....++.|.|.
T Consensus 77 ~C~a~N~--~~~~~a~L~V~ 94 (100)
T 2yuz_A 77 VFAPDAY--NVTLPAKVHVI 94 (100)
T ss_dssp EEEESSS--CCCEEEEEEEE
T ss_pred EEEEcCC--CeeEEEEEEEe
Confidence 9999987 45567777876
No 283
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.73 E-value=9.2e-17 Score=114.45 Aligned_cols=130 Identities=18% Similarity=0.288 Sum_probs=99.5
Q ss_pred CCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEE
Q psy7036 111 LAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVT 190 (254)
Q Consensus 111 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~ 190 (254)
..+.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... + ..|.|.+++.+|+|.|+|.
T Consensus 17 ~~~~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~--------~-----~~L~i~~v~~~d~G~Y~C~ 83 (218)
T 3k0w_A 17 RGSKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNGN--------T-----SELIFNAVHVKDAGFYVCR 83 (218)
T ss_dssp --CCEEECCCCEEEETTSBEEEECEETTTTSSEEEEEETTEECTTCC--------S-----SEEEETTCCGGGCEEEEEE
T ss_pred CCCEEEECCCCeEEeCCCcEEEEeeecCCCCCEEEEEECCEECCCCC--------C-----CEEEEccCChhhCeEeEEE
Confidence 34455666677888899999999999999999999999998875432 1 2799999999999999999
Q ss_pred EEcCCCcc-eEEEEEEEecCCCCC-----CCCCCCCeeecCCccccccCCCCcEEEEEEEeccCCCceeC
Q psy7036 191 AKNELGES-NATISLNFDSDDAPV-----PGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEPEPTISW 254 (254)
Q Consensus 191 ~~~~~~~~-~~~~~~~v~~~~~~~-----~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p~p~~~W 254 (254)
+.|..+.. ...+.+.|....... .....+|.+...+....+.+|+ .+.|.|.+.|.|.|.++|
T Consensus 84 ~~n~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~-~v~L~C~~~g~p~~~v~W 152 (218)
T 3k0w_A 84 VNNNFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGS-TLVLQCVAVGSPIPHYQW 152 (218)
T ss_dssp EECTTCCEECCCEEEEEECCCGGGCTTCCSBCCSSCEEEECCCCEEECTTC-CEEEECEEEBSSCCEEEE
T ss_pred EEcCCCCceeeEEEEEEEccCcccccccccccCCCceEEECCCceeecCCC-cEEEEEEecccCCCeEEE
Confidence 99987754 445666666432110 0011246777777777888999 999999999999999998
No 284
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=99.73 E-value=1.7e-15 Score=103.58 Aligned_cols=162 Identities=14% Similarity=0.149 Sum_probs=105.6
Q ss_pred eEeCCCceeecCCCeEEEEEEEeeCCCCc-eEEEeC-CEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEEEE
Q psy7036 11 FTQKPQLRQEDEGNRLIFECQLLCNPKPD-IVWFRG-ETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKVKA 88 (254)
Q Consensus 11 ~~~~~~~~~v~~g~~v~l~C~~~~~~~~~-v~W~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 88 (254)
+.+.|+...|.+|+++.|+|.+. .+.+. +.|.-. ++...... ......|.|.+++. | |.|.|.+
T Consensus 2 v~v~P~~~~V~~G~Sv~l~Cs~~-c~~p~~~~~~t~l~~~~~~~~-----------~~~~~~l~l~~vs~-~-g~y~C~~ 67 (185)
T 1iam_A 2 TSVSPSKVILPRGGSVLVTCSTS-CDQPKLLGIETPLPKKELLLP-----------GNNRKVYELSNVQE-D-SQPMCYS 67 (185)
T ss_dssp EEEESSEEEEETTEEEEEEEEEC-SSSCSEEEEECSSCEEEECSS-----------SSSEEEEEEEEECS-C-BCCEEEE
T ss_pred eEEECCCcEEeCCCCEEEEEEcc-CCCCccceEEeeCCCccEecc-----------CCceeEEEEEecCc-C-CEEEEEE
Confidence 45667778899999999999996 44444 677521 11111010 11122689999983 3 9999999
Q ss_pred EcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeC-CCC--eEEEEECCEecccCCcceEEEcC
Q psy7036 89 KNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQAD-PAP--TVIWSHSGVQVKEDKRHKFSIDK 165 (254)
Q Consensus 89 ~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~--~~~W~~~~~~~~~~~~~~~~~~~ 165 (254)
..........+.|.|.. .|......+....+.+|+.++|.|.+.+. |.. .+.|+|++..+..... ...
T Consensus 68 ~c~~~~~~~~~~l~V~~-----~P~~v~i~~~~~~~~~G~~~tL~C~v~g~~P~~~l~i~w~kg~~~l~~~~~----~~~ 138 (185)
T 1iam_A 68 NCPDGQSTAKTFLTVYW-----TPERVELAPLPSWQPVGKQLTLRCQVEGGAPRAQLTVVLLRGEKELKREPA----VGE 138 (185)
T ss_dssp ECSSCEEEEECEEEEEB-----CCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEEC----CTT
T ss_pred ECCCCceEEEEEEEEeC-----CCCCCEEccCCccccCCCcEEEEEEcCCccCCCCcEEEEEeCCEEcccccC----CCc
Confidence 76655667788888863 23333344444457789999999999885 443 4899999988753220 011
Q ss_pred CCCceeeEEEEccCCCCCceeEEEEEEcCCCcc
Q psy7036 166 DGHSYFASLEIIDVTIEDAGKYKVTAKNELGES 198 (254)
Q Consensus 166 ~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~ 198 (254)
+ ...+|++...+.+|...|+|+|.|..+..
T Consensus 139 ~---~~~tl~~~~~reD~g~~~sC~A~~~l~~~ 168 (185)
T 1iam_A 139 P---AEVTTTVLVRRDHHGAQFSCRTELDLRPQ 168 (185)
T ss_dssp T---EEEEEEEECCSSCSSCEEEEEEEEECGGG
T ss_pred c---ccEEEEEeceeccCCCeEEEEEEecCccc
Confidence 1 12257766555555559999999987743
No 285
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.73 E-value=1.6e-16 Score=101.48 Aligned_cols=100 Identities=21% Similarity=0.314 Sum_probs=75.9
Q ss_pred CCCCeeEeCCCceeecCCCeEEEEEEEeeC---CCCceEEEeCCEE-eee--CCcceEEE-eecCCcceEEEEEEeccCC
Q psy7036 6 DFAPSFTQKPQLRQEDEGNRLIFECQLLCN---PKPDIVWFRGETQ-LSE--DTRTVMKT-TPIGTNKYLVALELDDVIE 78 (254)
Q Consensus 6 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~---~~~~v~W~~~~~~-~~~--~~~~~~~~-~~~~~~~~~~~l~i~~~~~ 78 (254)
..-|.|...|+.+.+.+|++++|.|.+.+. |.|.|+|||+... +.. ..++.+.. .......+.+.|+|.+++.
T Consensus 5 ~~~~~F~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~ 84 (126)
T 2dav_A 5 SSGILFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKD 84 (126)
T ss_dssp CSSCSCCSCCCCCEEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCT
T ss_pred CcccEEEEcCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCc
Confidence 345678999999999999999999999774 7899999997421 111 22333321 1122223456899999999
Q ss_pred CCCeEEEEEEEcCCCceEEEEEEEEec
Q psy7036 79 TDAGLYKVKAKNKMGEVAASINLNFSR 105 (254)
Q Consensus 79 ~d~G~Y~C~~~~~~~~~~~~~~l~v~~ 105 (254)
.|+|.|+|++.|..+.....+.|.|..
T Consensus 85 ~DaG~Y~Cevsn~~g~~~~~~~L~V~~ 111 (126)
T 2dav_A 85 NFAGNYRCEVTYKDKFDSCSFDLEVHE 111 (126)
T ss_dssp TSCEEEEEEEECSSCEEEECCEEEEEC
T ss_pred ccCEEEEEEEEeCCCcEEEEEEEEEEe
Confidence 999999999999999998999999874
No 286
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.73 E-value=1.4e-16 Score=100.51 Aligned_cols=98 Identities=18% Similarity=0.283 Sum_probs=74.6
Q ss_pred CCCeeEeCCCceeecCCCeEEEEEEEeeCCC---CceEEEeCCEEeee---CCcceEEEee-cCCcceEEEEEEeccCCC
Q psy7036 7 FAPSFTQKPQLRQEDEGNRLIFECQLLCNPK---PDIVWFRGETQLSE---DTRTVMKTTP-IGTNKYLVALELDDVIET 79 (254)
Q Consensus 7 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~---~~v~W~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~l~i~~~~~~ 79 (254)
..|.|...|....+.+|++++|.|.+.|.|. +.+.|||++..... ..++.+.... .........|.|.+++..
T Consensus 3 p~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 82 (108)
T 3cx2_A 3 PIGLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPA 82 (108)
T ss_dssp CCCSCSBCCCCEEEETTCCEEEEEEEECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGG
T ss_pred CccEEEeCCCcEEEeCCCCEEEEEEECCCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCc
Confidence 4688999999999999999999999999887 99999998732211 1222222111 111223458999999999
Q ss_pred CCeEEEEEEEcCCCceEEEEEEEEe
Q psy7036 80 DAGLYKVKAKNKMGEVAASINLNFS 104 (254)
Q Consensus 80 d~G~Y~C~~~~~~~~~~~~~~l~v~ 104 (254)
|+|.|+|.+.|..|.....+.|.|.
T Consensus 83 D~G~Y~C~a~N~~G~~~~~~~L~V~ 107 (108)
T 3cx2_A 83 FTGSYRCEVSTKDKFDCSNFNLTVH 107 (108)
T ss_dssp GCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred cCEEEEEEEecCCCceEEEEEEEEe
Confidence 9999999999999999888888874
No 287
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.73 E-value=7.7e-18 Score=105.82 Aligned_cols=94 Identities=30% Similarity=0.489 Sum_probs=79.4
Q ss_pred CCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEE
Q psy7036 6 DFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYK 85 (254)
Q Consensus 6 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 85 (254)
..+|.|...|....+.+|+++.|.|.+.|.|.+.+.|++++..+....++.+... .....|.|.+++..|+|.|+
T Consensus 12 ~~~~~i~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~-----~~~~~L~I~~v~~~D~G~Y~ 86 (106)
T 1nct_A 12 TLAARILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTT-----KYKSTFEISSVQASDEGNYS 86 (106)
T ss_dssp SCCCEEEECCCCEEESSSSCEECCEEEECSSCCBCCBCSSSSCCTTCSSEEEEEC-----SSEEEEEECCCCSSCCSEEE
T ss_pred CCCCEEEECCCCEEEeCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEEC-----CCEEEEEECcCCchhCEEEE
Confidence 3578899999999999999999999999999999999999988766555544321 12348999999999999999
Q ss_pred EEEEcCCCceEEEEEEEEe
Q psy7036 86 VKAKNKMGEVAASINLNFS 104 (254)
Q Consensus 86 C~~~~~~~~~~~~~~l~v~ 104 (254)
|.+.|..|.....+.|.|.
T Consensus 87 C~a~N~~G~~~~~~~l~V~ 105 (106)
T 1nct_A 87 VVVENSEGKQEAEFTLTIQ 105 (106)
T ss_dssp ECCBCSSCBCCEEEEEEEC
T ss_pred EEEEeCCCeEEEEEEEEEE
Confidence 9999999998888888774
No 288
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.72 E-value=1e-16 Score=97.91 Aligned_cols=89 Identities=17% Similarity=0.073 Sum_probs=72.0
Q ss_pred CCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEE
Q psy7036 6 DFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYK 85 (254)
Q Consensus 6 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 85 (254)
..+|.|...+.+..+.+|++++|.|.+.+ +.+.++|+|+|..+....++.+... + ..+.|.|.+++.+|+|.|+
T Consensus 3 ~~~~~~~~~~~~~~v~~G~~v~l~C~v~~-~~~~v~W~k~g~~i~~~~~~~i~~~--g---~~~~L~I~~v~~~D~G~Y~ 76 (93)
T 1waa_A 3 MALIEVEKPLYGVEVFVGETAHFEIELSE-PDVHGQWKLKGQPLAASPDCEIIED--G---KKHILILHNCQLGMTGEVS 76 (93)
T ss_dssp CCCCCEEECCCCEEEETTSCEEEEEEESS-SSCCCEEEETTEECCCBTTEEEEEE--T---TEEEEEECSCCGGGCEEEE
T ss_pred CCCcEeeccCcceEEeCCCCEEEEEEECC-CCCeEEEEECCEECcCCCCEEEEEE--C---CEEEEEECCCChhhCEEEE
Confidence 35788999999999999999999999975 4578999999999987766655432 1 2237999999999999999
Q ss_pred EEEEcCCCceEEEEEEEEe
Q psy7036 86 VKAKNKMGEVAASINLNFS 104 (254)
Q Consensus 86 C~~~~~~~~~~~~~~l~v~ 104 (254)
|.+.|. ..+..|.|.
T Consensus 77 C~a~n~----~~sa~L~V~ 91 (93)
T 1waa_A 77 FQAANT----KSAANLKVK 91 (93)
T ss_dssp EEETTE----EEEEEEEEE
T ss_pred EEECCC----cEEEEEEEE
Confidence 999764 356677764
No 289
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.72 E-value=2e-16 Score=111.31 Aligned_cols=122 Identities=13% Similarity=0.196 Sum_probs=85.7
Q ss_pred CeeeecCCCeEEEEEEEeeCCC-----CeEEEEE-CCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEc
Q psy7036 120 SIRQEDDGKRLLFECRIQADPA-----PTVIWSH-SGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKN 193 (254)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~~~~-----~~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~ 193 (254)
..+.+..|+.+.|.|.+.+.|. +.+.|+| ++.......+..+. ..........|.|.+++.+|+|.|+|.+.|
T Consensus 10 ~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~-~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 88 (202)
T 3bp6_B 10 EVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLL-EEQLPLGKALFHIPSVQVRDSGQYRCLVIC 88 (202)
T ss_dssp SEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEEC-GGGGGGTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred cCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEe-eccccCCeeEEEECCCCHHHCcEEEEEEEe
Confidence 4567889999999999988875 7899999 44333222222221 111011224899999999999999999999
Q ss_pred CCCcceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEeccCCCceeC
Q psy7036 194 ELGESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEPEPTISW 254 (254)
Q Consensus 194 ~~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p~p~~~W 254 (254)
..+.....+.|.|.... ..|.+.. ..+.+|+ .+.|.|.+.|+|.|.++|
T Consensus 89 ~~~~~~~~~~l~V~~~~-------~~p~~~~----~~~~~g~-~v~l~C~~~g~P~p~v~W 137 (202)
T 3bp6_B 89 GAAWDYKYLTVKVKASY-------MRIDTRI----LEVPGTG-EVQLTCQARGYPLAEVSW 137 (202)
T ss_dssp TTEEEEEEEEEEEEBCC-------CCEEEEE----EECTTTC-CEEEEEEEEEBSCCEEEE
T ss_pred CCCcceEEEEEEecCCC-------CcccEEE----EecCCCC-eEEEEEEccccCCceEEE
Confidence 98877778888877421 2233322 1345688 999999999999999999
No 290
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.72 E-value=1.3e-16 Score=112.60 Aligned_cols=128 Identities=15% Similarity=0.240 Sum_probs=90.5
Q ss_pred eeeecCCCeEEEEEEEee-CCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcce
Q psy7036 121 IRQEDDGKRLLFECRIQA-DPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESN 199 (254)
Q Consensus 121 ~~~~~~g~~~~l~C~~~~-~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~ 199 (254)
...+.+|..+.|.|.+.+ .|.+.+.|++++..+..+....+...... ....|.|.+++.+|+|.|+|.|.| |...
T Consensus 11 ~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~~~~~~~~~~~--g~~~L~I~~v~~~D~G~Y~C~a~N--g~a~ 86 (207)
T 3rbs_A 11 AVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNT--GIIEMFMEKLQDEDEGTYTFQLQD--GKAT 86 (207)
T ss_dssp EEEECGGGCEEEEEECSCCCSCCEEEEEETTEEECSSSSCEEEECTTT--CEEEEEESCCCGGGCEEEEEEEEE--TTEE
T ss_pred ceEEEeCCeEEEEEEEecCCCCCEEEEEECCEECccCCCEEEEEeCCC--CEEEEEECCCChhhCEEEEEEEEC--CCeE
Confidence 467788999999999864 78999999999999987666655543321 223799999999999999999999 4444
Q ss_pred EEEEEEEecCCC-------CC----CCCCCCCeeecCCccccccCCCCcEEEEEEEecc-CCCceeC
Q psy7036 200 ATISLNFDSDDA-------PV----PGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGE-PEPTISW 254 (254)
Q Consensus 200 ~~~~~~v~~~~~-------~~----~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~-p~p~~~W 254 (254)
....+.+..... .. .....+|.|...+ ...+.+|+ .+.|.|.+.|. |.|.++|
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~-~~~v~~g~-~v~l~C~v~g~~P~p~i~W 151 (207)
T 3rbs_A 87 NHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYL-SWEVTGEC-NVLLKCKVANIKKETHIVW 151 (207)
T ss_dssp EEEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEE-EEEEETTT-EEEEEEEEESCCTTCEEEE
T ss_pred EEEEEEEEccchhhhcccccccccccccCCCCceEecC-CcEEcCCC-cEEEEEEEeCCCCCCEEEE
Confidence 444332210000 00 0000145565544 46778899 99999999999 9999999
No 291
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.72 E-value=6.6e-17 Score=100.55 Aligned_cols=93 Identities=19% Similarity=0.335 Sum_probs=76.9
Q ss_pred CCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEE
Q psy7036 6 DFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYK 85 (254)
Q Consensus 6 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 85 (254)
..+|.|...|....+.+|++++|.|.+.+.|.+.+.|++++..+..... ++.....+ .|.|.+++..|+|.|+
T Consensus 6 ~~~P~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~-~~~~~~~~------~L~i~~v~~~d~G~Y~ 78 (100)
T 2edj_A 6 SGPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDP-RATIQEQG------TLQIKNLRISDTGTYT 78 (100)
T ss_dssp CSSCEEEECCCCEEEESSSEEEECCEEECSSCCEEEEEESSSEESSSCS-SCEECTTC------CEEEESCCTTTCCEEE
T ss_pred CCCCEEEeCcCCEEEcCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCC-CEEEcCCC------EEEEccCCcccCEEEE
Confidence 4588999999999999999999999999999999999999988763222 12212121 6999999999999999
Q ss_pred EEEEcCCCceEEEEEEEEec
Q psy7036 86 VKAKNKMGEVAASINLNFSR 105 (254)
Q Consensus 86 C~~~~~~~~~~~~~~l~v~~ 105 (254)
|.+.|..|.....+.|.|.+
T Consensus 79 C~a~n~~g~~~~~~~l~V~~ 98 (100)
T 2edj_A 79 CVATSSSGETSWSAVLDVTE 98 (100)
T ss_dssp EEEECSSCCCBCCEEEEEES
T ss_pred EEEEcCCCCEEEEEEEEEec
Confidence 99999999888888888863
No 292
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.72 E-value=1.8e-16 Score=97.92 Aligned_cols=90 Identities=19% Similarity=0.350 Sum_probs=75.4
Q ss_pred eeEeCCCceeecCCCeEEEEEEEeeC-CCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEEEE
Q psy7036 10 SFTQKPQLRQEDEGNRLIFECQLLCN-PKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKVKA 88 (254)
Q Consensus 10 ~~~~~~~~~~v~~g~~v~l~C~~~~~-~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 88 (254)
.+...|....+.+|++++|.|.+.+. |.+.+.|++++..+....++.+... .....|.|.+++..|+|.|+|.+
T Consensus 3 ~v~~~~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~~~~~~~~~~-----~~~~~L~i~~v~~~D~G~Y~C~a 77 (97)
T 2bk8_A 3 MVSGQIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENSEKYEITYE-----DGVAILYVKDITKLDDGTYRCKV 77 (97)
T ss_dssp CEECCCCCEEECTTCCEEEEEEEESCCTTCEEEEEETTEECCSSSSEEEEEE-----TTEEEEEECSCCGGGCEEEEEEE
T ss_pred ceeccCcCEEEcCCCcEEEEEEEeccCCCCEEEEEECCEECcCCCCEEEEEc-----CCeEEEEEecCChhhCeEEEEEE
Confidence 35567778899999999999999986 8999999999999877666554332 12347999999999999999999
Q ss_pred EcCCCceEEEEEEEEe
Q psy7036 89 KNKMGEVAASINLNFS 104 (254)
Q Consensus 89 ~~~~~~~~~~~~l~v~ 104 (254)
.|..|.....+.|.|.
T Consensus 78 ~n~~g~~~~~~~l~V~ 93 (97)
T 2bk8_A 78 VNDYGEDSSYAELFVK 93 (97)
T ss_dssp ECSSCEEEEEEEEEET
T ss_pred ECCCCeEeEEEEEEEE
Confidence 9999998888888875
No 293
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.72 E-value=4.5e-17 Score=104.49 Aligned_cols=94 Identities=20% Similarity=0.314 Sum_probs=77.7
Q ss_pred CCCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEE
Q psy7036 5 EDFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLY 84 (254)
Q Consensus 5 ~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 84 (254)
...+|.|...+....+.+|++++|.|.+.|.|.+.+.|+|++..+..... ++.....+ .|.|.+++.+|+|.|
T Consensus 5 ~~~pP~i~~~p~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~~~~-~~~~~~~~------~L~i~~v~~~D~G~Y 77 (118)
T 2eo9_A 5 SSGPPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDS-RIKQLENG------VLQIRYAKLGDTGRY 77 (118)
T ss_dssp CCCSCCCSBCCCCEEEETTCEEEEECBCCCSSCCEEEEEESSSBCCTTST-TEEEEETT------EEEEESCCGGGCCCE
T ss_pred CCCCCEEEcCCCCEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCCC-eEEEccCC------EEEEccCCcCCCEEE
Confidence 34588999999999999999999999999999999999999988754222 22222222 799999999999999
Q ss_pred EEEEEcCCCceEEEEEEEEec
Q psy7036 85 KVKAKNKMGEVAASINLNFSR 105 (254)
Q Consensus 85 ~C~~~~~~~~~~~~~~l~v~~ 105 (254)
+|.+.|..|.....+.|.|..
T Consensus 78 ~C~a~n~~g~~~~~~~l~V~~ 98 (118)
T 2eo9_A 78 TCIASTPSGEATWSAYIEVQE 98 (118)
T ss_dssp EEEEECSSCEEEEECCEEEEC
T ss_pred EEEEEcCCCcEEEEEEEEEEe
Confidence 999999999988888888874
No 294
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.71 E-value=6.5e-17 Score=114.57 Aligned_cols=121 Identities=19% Similarity=0.299 Sum_probs=88.8
Q ss_pred cCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecc----------cCCcceEEEcCCCCceeeEEEEccCCCCCcee
Q psy7036 117 KKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVK----------EDKRHKFSIDKDGHSYFASLEIIDVTIEDAGK 186 (254)
Q Consensus 117 ~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~----------~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 186 (254)
..+....+.+|+.+.|.|.+.+.|.+.+.|++++..+. .....++.... ..|.|.+++.+|+|.
T Consensus 6 ~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~------~~L~i~~v~~~D~G~ 79 (212)
T 1f97_A 6 TAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSS------SGITFSSVTRKDNGE 79 (212)
T ss_dssp CSCSEEEEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEET------TEEEESCCCGGGCEE
T ss_pred ecCCCeEEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEeec------eeEEEcccCcccCeE
Confidence 34556778899999999999988899999999875521 11111222222 379999999999999
Q ss_pred EEEEEEcCCC--cceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEE-EeccCCCceeC
Q psy7036 187 YKVTAKNELG--ESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECR-LVGEPEPTISW 254 (254)
Q Consensus 187 y~C~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~-~~~~p~p~~~W 254 (254)
|+|.+.+..| .....+.|.|.. +|.+...+....+.+|+ .+.|.|. +.+.|.|.++|
T Consensus 80 Y~C~~~~~~g~~~~~~~~~l~V~~----------~p~~~~~~~~~~~~~g~-~~~l~C~~~~~~p~~~i~W 139 (212)
T 1f97_A 80 YTCMVSEEGGQNYGEVSIHLTVLV----------PPSKPTISVPSSVTIGN-RAVLTCSEHDGSPPSEYSW 139 (212)
T ss_dssp EEEEEEETTSSSEEEEEEEEEEEB----------CCCCCEEECCSEEETTS-CEEEEEECSCCBSCCEEEE
T ss_pred EEEEEEccCCCcccEEEEEEEEEc----------CCCCcccCCccccCCCC-eEEEEEEcccCcCCCEEEE
Confidence 9999999877 345666677764 22232223334677888 9999999 79999999998
No 295
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.71 E-value=1.4e-17 Score=105.14 Aligned_cols=98 Identities=26% Similarity=0.437 Sum_probs=69.3
Q ss_pred CCCCCCCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCC
Q psy7036 1 MGIAEDFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETD 80 (254)
Q Consensus 1 ~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d 80 (254)
+.|.+..+|.|...+....+.+|++++|.|.+.|.|.+.+.|++++..+....+.... ... ..|.|.+++..|
T Consensus 3 ~~v~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~--~~~-----~~L~i~~v~~~D 75 (108)
T 3kvq_A 3 LTVLERVAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLK--DGN-----RNLTIRRVRKED 75 (108)
T ss_dssp --------CCCBSCCCCEEEETTCCEEEECBCC----CCEEEEESSSBCCCBTTEEEE--TTT-----TEEEECSCCGGG
T ss_pred eeECccCCCceecCCCCeEEeCCCeEEEEEECcCcCCCeEEEEECCeEcccCCCeEEe--CCC-----cEEEEeecCccc
Confidence 3566778999999999999999999999999999999999999999887655443321 111 179999999999
Q ss_pred CeEEEEEEEcCCCceEEEEEEEEec
Q psy7036 81 AGLYKVKAKNKMGEVAASINLNFSR 105 (254)
Q Consensus 81 ~G~Y~C~~~~~~~~~~~~~~l~v~~ 105 (254)
+|.|+|.+.|..|.....+.|.|..
T Consensus 76 ~G~Y~C~a~n~~g~~~~~~~l~V~~ 100 (108)
T 3kvq_A 76 EGLYTCQACSVLGCAKVEAFFIIEG 100 (108)
T ss_dssp CEEEEEEEC----CEEEEEEEEEEC
T ss_pred CEEEEEEEEeCCCceEEEEEEEEeC
Confidence 9999999999999988888888863
No 296
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.71 E-value=1.8e-17 Score=104.98 Aligned_cols=97 Identities=26% Similarity=0.420 Sum_probs=81.2
Q ss_pred CCCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEE
Q psy7036 5 EDFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLY 84 (254)
Q Consensus 5 ~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 84 (254)
...+|.|...+....+.+|++++|.|.+.+.|.+.+.|++++..+............. ....|.|.+++..|+|.|
T Consensus 6 ~~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~----~~~~L~i~~v~~~D~G~Y 81 (110)
T 2dm3_A 6 SGFRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVREN----GVHSLIIEPVTSRDAGIY 81 (110)
T ss_dssp CCCCCEEEECCCEEEEESSSCBCCEEEEECSSCCEEECBBSSSBCCCCSSEEEEECTT----SCEEEEESSCCGGGCSBB
T ss_pred CCCCCcEEeCCCcEEEeCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCceEEEEecC----CeEEEEEeeCCcccCEEE
Confidence 4578999999999999999999999999999999999999998877655443332221 234799999999999999
Q ss_pred EEEEEcCCCceEEEEEEEEec
Q psy7036 85 KVKAKNKMGEVAASINLNFSR 105 (254)
Q Consensus 85 ~C~~~~~~~~~~~~~~l~v~~ 105 (254)
+|.+.|..|.....+.|.|..
T Consensus 82 ~C~a~n~~g~~~~~~~l~V~~ 102 (110)
T 2dm3_A 82 TCIATNRAGQNSFSLELVVAA 102 (110)
T ss_dssp CEEEECSSCEEEECCEEEEEC
T ss_pred EEEEECCCCEEEEEEEEEEeC
Confidence 999999999988888888874
No 297
>3f8u_B Tapasin; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens}
Probab=99.71 E-value=1.5e-15 Score=115.28 Aligned_cols=177 Identities=16% Similarity=0.173 Sum_probs=108.9
Q ss_pred CCCceeecCCCeEEEEEEEeeCC--------------CCceEEEeC--CE--Ee--e-eCC-------c-ceEEEee---
Q psy7036 14 KPQLRQEDEGNRLIFECQLLCNP--------------KPDIVWFRG--ET--QL--S-EDT-------R-TVMKTTP--- 61 (254)
Q Consensus 14 ~~~~~~v~~g~~v~l~C~~~~~~--------------~~~v~W~~~--~~--~~--~-~~~-------~-~~~~~~~--- 61 (254)
.+..+.+.+|++++|.|.....+ ...+.||+. |+ .+ . .+. + ....+..
T Consensus 164 q~~sv~a~~Ge~vtL~C~~S~~~~~~~a~~~~~~~~~~~~V~Wyrq~pg~~~~vliY~~g~~~q~~~~~~g~~~f~~~~~ 243 (401)
T 3f8u_B 164 HTPAPRVRLGQDALLDLSFAYMPPTSEAASSLAPGPPPFGLEWRRQHLGKGHLLLAATPGLNGQMPAAQEGAVAFAAWDD 243 (401)
T ss_dssp SCSSCEEETTSCEEECCEEEECCCTTC------CCSCCCEEEEEEEETTEEEEEEEECTTSCCCCCCCCTTCEEEEEESC
T ss_pred CCCcEEEeCCCCEEEEEeCCCCcccccccccccccCCceEEEEEEecCCCCcEEEEEeCCCccccccccCCeEEEEeecc
Confidence 55677899999999999986433 346899963 32 11 1 110 0 1111110
Q ss_pred c---CCcceEEEEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeee-ecCCC-eEEEEEEE
Q psy7036 62 I---GTNKYLVALELDDVIETDAGLYKVKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQ-EDDGK-RLLFECRI 136 (254)
Q Consensus 62 ~---~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~-~~~g~-~~~l~C~~ 136 (254)
+ +......+|.|.+++..|+|.|.|.+.+..+.....+.|.|. .+|.+...+.... ...|+ .++|.|.+
T Consensus 244 ~~~~g~~~g~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~v~L~V~------~pP~V~v~p~~~~~~~~G~~~vtL~C~a 317 (401)
T 3f8u_B 244 DEPWGPWTGNGTFWLPRVQPFQEGTYLATIHLPYLQGQVTLELAVY------KPPKVSLMPATLARAAPGEAPPELLCLV 317 (401)
T ss_dssp CCSSCCEEEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEEEEE------BCCEEEEESSSCCCCCTTCCCCCEEEEE
T ss_pred cccccccCCcEEEEECcCCHhhCceEEEEEEecccceeEEEEEeec------cCCeEeeccCcceeecCCCccEEEEEEe
Confidence 1 123456799999999999999999999887776677777776 3444433322222 34565 79999999
Q ss_pred eeC-CC--CeEEEE-ECCE---ecccCCc---ceEEEcCCC-CceeeEEEEccCCCCCc-eeEEEEEEcCCC
Q psy7036 137 QAD-PA--PTVIWS-HSGV---QVKEDKR---HKFSIDKDG-HSYFASLEIIDVTIEDA-GKYKVTAKNELG 196 (254)
Q Consensus 137 ~~~-~~--~~~~W~-~~~~---~~~~~~~---~~~~~~~~~-~~~~~~l~i~~~~~~d~-G~y~C~~~~~~~ 196 (254)
.++ |. +.+.|. +++. .+..... .......++ +...+.|.+...+.++. +.|+|.+.|...
T Consensus 318 ~GfyP~~~~~VtW~~rdg~~g~~~~~~~~~~~s~~~~~~DGTysvsS~L~V~~~~~e~~g~~YTC~V~H~sL 389 (401)
T 3f8u_B 318 SHFYPSGGLEVEWELRGGPGGRSQKAEGQRWLSALRHHSDGSVSLSGHLQPPPVTTEQHGARYACRIHHPSL 389 (401)
T ss_dssp EEEBSSTTCEEEEEEESSSSCSCEECCSEEEECCCEECTTSCEEEEEEEECCCCCGGGTTCEEEEEEECTTS
T ss_pred cCCcCCCCcEEEEEecCCCCCceecccccccccccccCCCceEEEEEEEEEccCccccCCCEEEEEEEcCCC
Confidence 885 54 689995 7652 1111110 111222333 23445677766543344 599999999763
No 298
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.71 E-value=4.1e-16 Score=99.43 Aligned_cols=95 Identities=20% Similarity=0.241 Sum_probs=73.8
Q ss_pred CCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeec--CCcceEEEEEEeccCCCCCeEE
Q psy7036 7 FAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPI--GTNKYLVALELDDVIETDAGLY 84 (254)
Q Consensus 7 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~i~~~~~~d~G~Y 84 (254)
++|.| .... ...+..+.|.|.+.|.|.|.++|+|||..+....+........ ........|.|.+++..|+|.|
T Consensus 3 ~pP~I-~l~~---~~~~~~~~l~c~v~G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y 78 (126)
T 1he7_A 3 MPASV-QLHT---AVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNY 78 (126)
T ss_dssp CCCCC-CCCC---CCCCCEEEEEEEECCSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEE
T ss_pred CCCEE-EccC---CccCccEEEEEEEeeeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEE
Confidence 57775 2221 3467899999999999999999999999998776654433221 1122345899999999999999
Q ss_pred EEEEEcCCCceEEEEEEEEec
Q psy7036 85 KVKAKNKMGEVAASINLNFSR 105 (254)
Q Consensus 85 ~C~~~~~~~~~~~~~~l~v~~ 105 (254)
+|.|.|..|.....+.|.|..
T Consensus 79 tC~A~N~~G~~~~t~~l~v~~ 99 (126)
T 1he7_A 79 TLLAANPFGQASASIMAAFMD 99 (126)
T ss_dssp EEEEEETTEEEEEEEEECCCS
T ss_pred EEEEEECCCeEEEEEEEEEEc
Confidence 999999999998888888864
No 299
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.71 E-value=2.5e-17 Score=116.70 Aligned_cols=134 Identities=28% Similarity=0.489 Sum_probs=97.6
Q ss_pred CCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCc---ceEEEcCCCCceeeEEEEccCCCCCceeE
Q psy7036 111 LAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKR---HKFSIDKDGHSYFASLEIIDVTIEDAGKY 187 (254)
Q Consensus 111 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~i~~~~~~d~G~y 187 (254)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+..... .......++......+.|.+++.+|+|.|
T Consensus 8 ~pp~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 87 (212)
T 2v9r_A 8 FPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVY 87 (212)
T ss_dssp EEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCEEE
T ss_pred CCcceecCCCceEEeCCCcEEEEEEcCCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCeEE
Confidence 455566666777888999999999999999999999999988764321 11223334433333466677899999999
Q ss_pred EEEEEcCCCcc-eEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEE-eccCCCceeC
Q psy7036 188 KVTAKNELGES-NATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRL-VGEPEPTISW 254 (254)
Q Consensus 188 ~C~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~-~~~p~p~~~W 254 (254)
+|.+.|..+.. .....+.|... ++.+...+....+..|+ .+.|.|.+ .+.|.|.++|
T Consensus 88 ~C~~~n~~g~~~~~~~~l~V~~~---------~~~~~~~~~~~~~~~g~-~~~l~C~~~~~~p~~~v~W 146 (212)
T 2v9r_A 88 VCVARNYLGEAVSHDASLEVAIL---------RDDFRQNPSDVMVAVGE-PAVMECQPPRGHPEPTISW 146 (212)
T ss_dssp EEEEEETTEEEECCCEEEEECEE---------CSSCSBCCCCEEEETTS-CEEEECBCCCEESCCEEEE
T ss_pred EEEEECCCCceeecceEEEEEec---------cccceeCCCceEecCCC-cEEEEEecCCCCCCCEEEE
Confidence 99999988764 34555555431 23344455566778898 99999999 8999999998
No 300
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.70 E-value=2.1e-16 Score=101.32 Aligned_cols=93 Identities=18% Similarity=0.350 Sum_probs=74.9
Q ss_pred CCCeeEe---CCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeE
Q psy7036 7 FAPSFTQ---KPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGL 83 (254)
Q Consensus 7 ~~p~~~~---~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 83 (254)
.+|.|.. .+....+.+|+++.|.|.+.|.|.+.+.|+|++..+. ..+..+... .....|.|.+++..|+|.
T Consensus 20 ~~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~-~~~~~~~~~-----~~~~~L~i~~~~~~D~G~ 93 (118)
T 2e7c_A 20 EPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLD-TSRVHVRTS-----DFDTVFFVRQAARSDSGE 93 (118)
T ss_dssp EEEEECCCTTTSSCEEEESSSCEEEEEEEEEESCCEEEEEETTEECC-CSSCEEEEC-----SSEEEEEESSCCTTTCEE
T ss_pred cCCeEecCcccCCCEEEECCCEEEEEEEEccCCCCEEEEEECCEECC-CCcEEEEEC-----CCeEEEEECCCChhcCEE
Confidence 3677754 3466788999999999999999999999999999986 334433321 123379999999999999
Q ss_pred EEEEEEcCCCceEEEEEEEEec
Q psy7036 84 YKVKAKNKMGEVAASINLNFSR 105 (254)
Q Consensus 84 Y~C~~~~~~~~~~~~~~l~v~~ 105 (254)
|+|.+.|..|.....+.|.|.+
T Consensus 94 Y~C~a~N~~G~~~~~~~l~V~~ 115 (118)
T 2e7c_A 94 YELSVQIENMKDTATIRIRVVE 115 (118)
T ss_dssp EEEEEECSSCEECCEEEEEEEC
T ss_pred EEEEEEeCCCeEEEEEEEEEEc
Confidence 9999999999888888888863
No 301
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.70 E-value=4e-17 Score=101.32 Aligned_cols=92 Identities=24% Similarity=0.434 Sum_probs=75.7
Q ss_pred CCCCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeE
Q psy7036 4 AEDFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGL 83 (254)
Q Consensus 4 ~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 83 (254)
.+..+|.|...+....+.+|++++|.|.+.+.|.+.+.|++++..+...... . . .....|.|.+++..|+|.
T Consensus 7 ~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~-~--~-----~~~~~L~i~~v~~~D~G~ 78 (99)
T 2yr3_A 7 GMEVAPSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYARST-C--E-----AGVAELHIQDALPEDHGT 78 (99)
T ss_dssp CCCEEEEEEECCCCEEECTTCCEEEECEEEEESCCCCEEEESSSBCSSCCCE-E--E-----TTEEEEEECSCCTTCCBC
T ss_pred CcccCCceeecCCCCEEeCCCeEEEEEEEeeeCCCeEEEEECCEECcccceE-e--e-----CCeEEEEECCCChhhCEE
Confidence 3456889999999999999999999999999999999999999877543321 1 1 112379999999999999
Q ss_pred EEEEEEcCCCceEEEEEEEE
Q psy7036 84 YKVKAKNKMGEVAASINLNF 103 (254)
Q Consensus 84 Y~C~~~~~~~~~~~~~~l~v 103 (254)
|+|.+.|..|.....+.|.|
T Consensus 79 Y~C~a~N~~g~~~~~~~l~V 98 (99)
T 2yr3_A 79 YTCLAENALGQVSCSAWVTV 98 (99)
T ss_dssp EEEEEECSSCEEEEECCEEE
T ss_pred EEEEEEECCCeEEEEEEEEE
Confidence 99999999998777777665
No 302
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.70 E-value=8.1e-17 Score=101.96 Aligned_cols=97 Identities=26% Similarity=0.384 Sum_probs=79.8
Q ss_pred CCCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeee-CCcceEEEeecCCcceEEEEEEeccCCCCCeE
Q psy7036 5 EDFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSE-DTRTVMKTTPIGTNKYLVALELDDVIETDAGL 83 (254)
Q Consensus 5 ~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 83 (254)
...+|.|...+....+.+|++++|.|.+.+.|.+.+.|+|++..+.. ..++.+... ......|.|.+++..|+|.
T Consensus 5 ~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~----~~~~~~L~i~~v~~~D~G~ 80 (110)
T 2dm2_A 5 SSGAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRD----LDGTCSLHTTASTLDDDGN 80 (110)
T ss_dssp CSCCCCBSSCCCCEEEETTCCEEEEEEBCCSSCCEEEEECSSCBCCTTCSSEEEEEC----TTCEEEEEESSCCTTTCSC
T ss_pred CCCCCEEEecCcCeEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCeEEEEEC----CCcEEEEEECCCChhhCEE
Confidence 44689999999999999999999999999999999999999988765 333333221 1223479999999999999
Q ss_pred EEEEEEcCCCceEEEEEEEEec
Q psy7036 84 YKVKAKNKMGEVAASINLNFSR 105 (254)
Q Consensus 84 Y~C~~~~~~~~~~~~~~l~v~~ 105 (254)
|+|.+.|..|.....+.|.|..
T Consensus 81 Y~C~a~N~~g~~~~~~~l~V~~ 102 (110)
T 2dm2_A 81 YTIMAANPQGRISCTGRLMVQA 102 (110)
T ss_dssp CEEEEECTTCCEEECCCEEEEC
T ss_pred EEEEEEECCCeEEEEEEEEEEC
Confidence 9999999999988888888864
No 303
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.70 E-value=3.5e-17 Score=100.72 Aligned_cols=87 Identities=25% Similarity=0.393 Sum_probs=73.4
Q ss_pred CCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEE
Q psy7036 7 FAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKV 86 (254)
Q Consensus 7 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 86 (254)
.+|.|...+....+.+|+++.|.|.+.+.| +.+.|+|++..+....++.+. +. .|.|.+++..|+|.|+|
T Consensus 8 ~pp~~~~~~~~~~v~~G~~v~l~C~~~g~p-p~i~W~k~g~~~~~~~~~~~~----~~-----~L~i~~~~~~D~G~Y~C 77 (95)
T 2ckn_A 8 QPWGVPVEVESLLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLVESNRTRIT----GE-----EVEVRDSIPADSGLYAC 77 (95)
T ss_dssp CSCCBTTBBCCEEECTTSCEEEECCEESSC-CEEEEEBTTBCCCCCSSEEEC----SS-----EEEESSCCGGGSEEEEE
T ss_pred CCCEEEcCcceEEEcCCCeEEEEEECCCCC-CceEEEECCEecCCCCCEEEe----CC-----EEEECCCChHHCEEEEE
Confidence 467888888889999999999999999887 799999999888765543332 11 79999999999999999
Q ss_pred EEEcCCCceEEEEEEEE
Q psy7036 87 KAKNKMGEVAASINLNF 103 (254)
Q Consensus 87 ~~~~~~~~~~~~~~l~v 103 (254)
.+.|..|.....+.|.|
T Consensus 78 ~a~n~~g~~~~~~~l~V 94 (95)
T 2ckn_A 78 VTSSPSGSDTTYFSVNV 94 (95)
T ss_dssp EEEETTEEEEEEEEEEE
T ss_pred EeccCCCcEEEEEEEEE
Confidence 99999998877777766
No 304
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.70 E-value=1.1e-16 Score=101.00 Aligned_cols=98 Identities=24% Similarity=0.430 Sum_probs=74.9
Q ss_pred CCCeeEeCCCceeecCCCeEEEEEEEeeC---CCCceEEEeCCE-Eeee--CCcceEEEe-ecCCcceEEEEEEeccCCC
Q psy7036 7 FAPSFTQKPQLRQEDEGNRLIFECQLLCN---PKPDIVWFRGET-QLSE--DTRTVMKTT-PIGTNKYLVALELDDVIET 79 (254)
Q Consensus 7 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~---~~~~v~W~~~~~-~~~~--~~~~~~~~~-~~~~~~~~~~l~i~~~~~~ 79 (254)
..+.|+..|.++.+.+|++++|.|.+.+. |.|.|+|||+.. .+.. ..++.+... ........+.|+|.+++..
T Consensus 11 ~~~~f~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 90 (118)
T 2edn_A 11 PTGVFLKKPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLG 90 (118)
T ss_dssp CSSSCSBCCCCCEEETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCTT
T ss_pred CcceEEECCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCChh
Confidence 45678889999999999999999999874 789999999752 2221 223333221 1122234568999999999
Q ss_pred CCeEEEEEEEcCCCceEEEEEEEEe
Q psy7036 80 DAGLYKVKAKNKMGEVAASINLNFS 104 (254)
Q Consensus 80 d~G~Y~C~~~~~~~~~~~~~~l~v~ 104 (254)
|+|.|+|++.|..|..+..+.|.|.
T Consensus 91 D~G~Y~Cevsn~~g~~s~~~~L~V~ 115 (118)
T 2edn_A 91 DRGYYRLEVKAKDTCDSCGFNIDVE 115 (118)
T ss_dssp TCSCEEEEEECSSCEEEEEECCEEE
T ss_pred hCEEEEEEEEEcCCcEEEEEEEEEE
Confidence 9999999999999998899999886
No 305
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.69 E-value=9.2e-17 Score=99.89 Aligned_cols=92 Identities=23% Similarity=0.451 Sum_probs=72.6
Q ss_pred CCCeeEeCC----CceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcce-EEEeecCCcceEEEEEEeccCCCCC
Q psy7036 7 FAPSFTQKP----QLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTV-MKTTPIGTNKYLVALELDDVIETDA 81 (254)
Q Consensus 7 ~~p~~~~~~----~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~i~~~~~~d~ 81 (254)
.+|.|...+ ....+.+|+++.|.|.+.|.|.+.+.|++++..+....+.. ....... ..|.|.+++..|+
T Consensus 3 ~~P~~~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~-----~~L~i~~v~~~D~ 77 (100)
T 3caf_A 3 RAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQH-----WSLIMESVVPSDK 77 (100)
T ss_dssp EEEEESCTTTTSCCEEEECTTCCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGG-----TEEEECSCCGGGC
T ss_pred CCCEeEcCccccccEEEecCCCEEEEEEEccccCCCEEEEEECCEEcccccccccEEEecCe-----EEEEEccCCcCCC
Confidence 467777554 45678999999999999999999999999999887654322 1111111 1799999999999
Q ss_pred eEEEEEEEcCCCceEEEEEEEE
Q psy7036 82 GLYKVKAKNKMGEVAASINLNF 103 (254)
Q Consensus 82 G~Y~C~~~~~~~~~~~~~~l~v 103 (254)
|.|+|.+.|..|.....+.|.|
T Consensus 78 G~Y~C~a~N~~g~~~~~~~l~V 99 (100)
T 3caf_A 78 GNYTCVVENEYGSINHTYHLDV 99 (100)
T ss_dssp EEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEEEEEEeCCCEEEEEEEEEE
Confidence 9999999999998887777776
No 306
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.69 E-value=7.8e-16 Score=98.02 Aligned_cols=95 Identities=19% Similarity=0.328 Sum_probs=77.9
Q ss_pred CCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEE
Q psy7036 111 LAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVT 190 (254)
Q Consensus 111 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~ 190 (254)
.+|.+...+....+..|+.+.|.|.+.+.|.+.+.|+|++..+....+..+..... ...|.|.+++.+|+|.|+|.
T Consensus 6 ~pp~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~----~~~L~I~~v~~~D~G~Y~C~ 81 (114)
T 2cqv_A 6 SGPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSEN----GSKLTILAARQEHCGCYTLL 81 (114)
T ss_dssp CCCEESCCCCSEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCCSSSEEEEECSS----EEEEEETTCCTTTCEEEEEE
T ss_pred CCCEEEeCCCCeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCCCCEEEEEcCC----EEEEEECCCChhcCEEEEEE
Confidence 56667667777888999999999999999999999999998887655444432221 24899999999999999999
Q ss_pred EEcCCCcceEEEEEEEecC
Q psy7036 191 AKNELGESNATISLNFDSD 209 (254)
Q Consensus 191 ~~~~~~~~~~~~~~~v~~~ 209 (254)
|.|..|.....+.|.|...
T Consensus 82 a~N~~g~~~~~~~l~V~~~ 100 (114)
T 2cqv_A 82 VENKLGSRQAQVNLTVVDK 100 (114)
T ss_dssp EECSSCEEECCEEEEEECS
T ss_pred EEECCCcEEEEEEEEEECC
Confidence 9999998888888888753
No 307
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.69 E-value=7.7e-17 Score=113.22 Aligned_cols=129 Identities=18% Similarity=0.262 Sum_probs=92.7
Q ss_pred cCCCeeeecCCCeEEEEEE-EeeCCC-CeEEEEECCEecccCCcce-EEEcCCCCceeeEEEEccCCCCCceeEEEEEEc
Q psy7036 117 KKPSIRQEDDGKRLLFECR-IQADPA-PTVIWSHSGVQVKEDKRHK-FSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKN 193 (254)
Q Consensus 117 ~~~~~~~~~~g~~~~l~C~-~~~~~~-~~~~W~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~ 193 (254)
..+....+.+|+.+.|.|. +.+.|. +.+.|++++..+....... .....++ .|.|.+++.+|+|.|+|.+.|
T Consensus 13 ~~~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~~~~~~-----~L~i~~v~~~d~G~Y~C~~~~ 87 (201)
T 3s97_C 13 EERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNG-----NLYIANVEASDKGNYSCFVSS 87 (201)
T ss_dssp SCCCCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEECTTTC-----CEEESSCCGGGCEEEEEEEEE
T ss_pred CCCceEEEECCCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEEEcCCC-----eEEECcCCcccCeEEEEEEEe
Confidence 3445677889999999999 888888 8999999987765332222 2222232 799999999999999999999
Q ss_pred CCCcceE---EEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEeccCCCceeC
Q psy7036 194 ELGESNA---TISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEPEPTISW 254 (254)
Q Consensus 194 ~~~~~~~---~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p~p~~~W 254 (254)
..+.... .+.+.+...... ...+|.+...+....+.+|+ .+.|.|.+.|.|.|.+.|
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~~~~~~~g~-~~~l~C~~~g~p~p~v~W 147 (201)
T 3s97_C 88 PSITKSVFSKFIPLIPIPERTT---KPYPADIVVQFKDVYALMGQ-NVTLECFALGNPVPDIRW 147 (201)
T ss_dssp GGGTEEEECCCEEEEEECCSSC---CCEEEEEEEECCCEEEETTC-CEEEEEEEEEESCCEEEE
T ss_pred cCCCcchhhcccceeecccccc---CCCCCceEecCCceEEecCC-cEEEEEEccCCCCCceEE
Confidence 7665432 233333322111 12355565555566788899 999999999999999998
No 308
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.69 E-value=1.9e-17 Score=121.93 Aligned_cols=176 Identities=15% Similarity=0.143 Sum_probs=55.1
Q ss_pred eCCCceeecCCCeEEEEEEEeeC-CCC--ceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEEEEE
Q psy7036 13 QKPQLRQEDEGNRLIFECQLLCN-PKP--DIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKVKAK 89 (254)
Q Consensus 13 ~~~~~~~v~~g~~v~l~C~~~~~-~~~--~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 89 (254)
+.+....+.+|+.++|+|.+.+. |.. .|+|||+++.+...... .......|.+...+.+|.+.|+|+|.
T Consensus 91 I~~~~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~~~~--------~~~~~~~l~~~~~~~D~g~~~~C~A~ 162 (291)
T 1mq8_A 91 LAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAV--------GEPAEVTTTVLVRRDHHGANFSCRTE 162 (291)
T ss_dssp BCCCCSBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEEEECC--------BTTEEEEEECCCSSSCSSCEEEEEEE
T ss_pred EecCCccccCCCCEEEEEEecCccCCCCcEEEEEECCEEeecccCC--------CCCceEEEEeeeeeccCCceEEEEEE
Confidence 33333457899999999999774 443 58999999877543210 11223367777777777779999999
Q ss_pred cCCCc--------eEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCC---eEEEEECCEecccCCc
Q psy7036 90 NKMGE--------VAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAP---TVIWSHSGVQVKEDKR 158 (254)
Q Consensus 90 ~~~~~--------~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~---~~~W~~~~~~~~~~~~ 158 (254)
+..+. ......|.|.. .|+..........+.+|+.+.|.|.+.+.+++ .+.|+++|+.+.....
T Consensus 163 ~~l~~~g~~l~~~~s~~~~L~V~~-----~P~~~~~~~~p~~l~eG~~v~l~C~~~g~~P~~~~~v~w~~~g~~l~~~~~ 237 (291)
T 1mq8_A 163 LDLRPQGLELFENTSAPYQLQTFV-----LPATPPQLVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNPTVT 237 (291)
T ss_dssp EECGGGTSCEEEECCCCEECBC----------------------------------------------------------
T ss_pred ecCCccCCccccccccceEEEEEe-----cCCCCceecCCcCccCCCeEEEEEEcCCCCCCcccEEEEEECCEecCceee
Confidence 86542 23345555542 11111111112256789999999999987554 5999999988754211
Q ss_pred ceEEEcCCCCceeeEEEEccCCC--CCceeEEEEEEcCCCcceEEEEEEEec
Q psy7036 159 HKFSIDKDGHSYFASLEIIDVTI--EDAGKYKVTAKNELGESNATISLNFDS 208 (254)
Q Consensus 159 ~~~~~~~~~~~~~~~l~i~~~~~--~d~G~y~C~~~~~~~~~~~~~~~~v~~ 208 (254)
. ++....+.+.+. +.. ++.+.|+|.+.+..........+.|..
T Consensus 238 ----~--~g~~~~~~~~~~-~~~~~~~~~~~~C~~~~~~~~~~~~~~l~v~~ 282 (291)
T 1mq8_A 238 ----Y--GNDSFSAKASVS-VTAEDEGTQRLTCAVILGNQSQETLQTVTIYS 282 (291)
T ss_dssp ----------------------------------------------------
T ss_pred ----e--cCCeEEEEEecc-eeEcCCCCEEEEEEEEeCCcceEEEEEEEEEc
Confidence 1 122111122221 123 345678899887555556666677764
No 309
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.69 E-value=7e-16 Score=109.26 Aligned_cols=126 Identities=21% Similarity=0.347 Sum_probs=91.5
Q ss_pred ecCCCeEEEEEEEeeC-CCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEE
Q psy7036 124 EDDGKRLLFECRIQAD-PAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATI 202 (254)
Q Consensus 124 ~~~g~~~~l~C~~~~~-~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~ 202 (254)
...++.+.|.|.+.+. |.+.+.|++++..+....+..+..... ...|.|.+++.+|+|.|+|.+.|..+....++
T Consensus 14 ~c~~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~~~~~~~~~~~----~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~ 89 (212)
T 2r15_A 14 QSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGE----QIWLQINEPTPNDKGKYVMELFDGKTGHQKTV 89 (212)
T ss_dssp EECSSEEEEEEEBSSCCSSCEEEEEETTEECCCCSSEEEEEETT----EEEEEEESCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred EEcCceEEEEEEEeccCCCceEEEEECCEEccCCCeEEEEEeCC----EEEEEECCCCcccCEEEEEEEecCCcceEEEE
Confidence 4467888999998875 578999999999987665554443332 13699999999999999999999888777666
Q ss_pred EEEEecCC-----------CCCCCCCCCCeeecCCccccccCCCCcEEEEEEEeccCCCceeC
Q psy7036 203 SLNFDSDD-----------APVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEPEPTISW 254 (254)
Q Consensus 203 ~~~v~~~~-----------~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p~p~~~W 254 (254)
.+.+.... ........++.+...+....+.+|+ .+.|.|.+.|.|.|.+.|
T Consensus 90 ~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~-~~~l~C~~~g~p~p~v~W 151 (212)
T 2r15_A 90 DLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGK-ALNLTCNVWGDPPPEVSW 151 (212)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTC-CEEEEEEEECSSCCEEEE
T ss_pred EEEEeeccchhhhccccCcccccccCCCcccccCCCcEEEccCC-eEEEEEEEcCCCCceEEE
Confidence 66543100 0000001134455556667788899 999999999999999998
No 310
>1hxm_A Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.68 E-value=1.8e-15 Score=108.18 Aligned_cols=169 Identities=14% Similarity=0.185 Sum_probs=101.2
Q ss_pred eeEeCCCceeecCCCeEEEEEEEeeCC--CCceEEEeCC-----EEeee---------CCcceEEEeecCCcceEEEEEE
Q psy7036 10 SFTQKPQLRQEDEGNRLIFECQLLCNP--KPDIVWFRGE-----TQLSE---------DTRTVMKTTPIGTNKYLVALEL 73 (254)
Q Consensus 10 ~~~~~~~~~~v~~g~~v~l~C~~~~~~--~~~v~W~~~~-----~~~~~---------~~~~~~~~~~~~~~~~~~~l~i 73 (254)
.+.+.|..+.+.+|++++|.|.+.+.+ ...+.|||.. ..+.. ..++.+... .......|.|
T Consensus 3 ~v~q~p~~v~v~~G~~vtL~C~~s~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~R~~~~~~---~~~~~~sL~I 79 (229)
T 1hxm_A 3 ELVPEHQTVPVSIGVPATLRCSMKGEAIGNYYINWYRKTQGNTMTFIYREKDIYGPGFKDNFQGDID---IAKNLAVLKI 79 (229)
T ss_dssp CEEESCSEEEEETTCCEEEEEEECSSCGGGSEEEEEEEESSSCSEEEEETTTEECTTTTTTEEEEEE---GGGTEEEEEE
T ss_pred ccEeCCCEEEEcCCCCEEEEeEecCCccCcceEEEEEECCCCCcEEEEEcCCccCCCcCCeEEEEEc---CCCCEEEEEE
Confidence 356778888999999999999997543 4679999842 22211 122222211 1223458999
Q ss_pred eccCCCCCeEEEEEEEcCC------Cc--eEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeC-CCC-e
Q psy7036 74 DDVIETDAGLYKVKAKNKM------GE--VAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQAD-PAP-T 143 (254)
Q Consensus 74 ~~~~~~d~G~Y~C~~~~~~------~~--~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~-~ 143 (254)
.+++.+|+|.|.|.+.+.. +. ......|.|........+|.+. +.. ....|.|.+.++ |.+ .
T Consensus 80 ~~v~~~Dsg~Y~C~~~~~~~~~~~~~~~~~g~gt~L~V~~~~~~~~~P~v~-------~~~-~~~~L~C~~~g~~P~~i~ 151 (229)
T 1hxm_A 80 LAPSERDEGSYYCACDTLGMGGEYTDKLIFGKGTRVTVEPRSQPHTKPSVF-------VMK-NGTNVACLVKEFYPKDIR 151 (229)
T ss_dssp SSCCGGGCEEEEEEEECCCCSSSCCCCCEEBCCEEEEEECCSCCCBCCEEE-------EEE-ETTEEEEEEESCBSSCCE
T ss_pred CcCCHhHCeEEEEEEecCCCcccccchhhcCccEEEEEeccCCCCcCCcEE-------EcC-CCCeEEEEEEEEeCCCEE
Confidence 9999999999999998753 11 1123466665311111122211 111 124899999886 443 8
Q ss_pred EEEEECCEecccCCcceEEEcCCCCceeeEEEEccC-CCCCceeEEEEEEcCCC
Q psy7036 144 VIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDV-TIEDAGKYKVTAKNELG 196 (254)
Q Consensus 144 ~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~-~~~d~G~y~C~~~~~~~ 196 (254)
+.|+++ ..+..... ......++. +.+... ..++.|.|+|.+.|..+
T Consensus 152 v~W~~~-~~~~~~~~-~~~~~~dg~-----y~~~~~~~~~~~~~ytC~V~h~~~ 198 (229)
T 1hxm_A 152 INLVSS-KKITEFDP-AIVISPSGK-----YNAVKLGKYEDSNSVTCSVQHDNK 198 (229)
T ss_dssp EEEECS-SEEEECCC-EEEECTTSS-----EEEEEEEEETTTTTCEEEEEETTE
T ss_pred EEEecC-CEEecCcc-ceEECCCCc-----EEEEECcccCCCCcEEEEEEeCCC
Confidence 999999 66643322 222233332 222222 23678899999999764
No 311
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.68 E-value=7.1e-16 Score=95.83 Aligned_cols=94 Identities=32% Similarity=0.514 Sum_probs=75.9
Q ss_pred CCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEE
Q psy7036 112 APTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTA 191 (254)
Q Consensus 112 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~ 191 (254)
+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+............++. ..|.|.+++.+|+|.|+|.|
T Consensus 5 ~P~~~~~p~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~---~~L~i~~v~~~D~G~Y~C~a 81 (100)
T 2kdg_A 5 PPRFIQVPENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGL---HSLIFEVVRASDAGAYACVA 81 (100)
T ss_dssp EEECCCCCCCEEEETTCCEEEEEECEEESCCEEEEEETTEEECCCSSSCEEEETTTE---EEEEESSCCGGGCEEEEEEE
T ss_pred CCeEEeCCCCEEecCCCEEEEEEEEEeeCCCEEEEEECCEECcCCCcEEEEEcCCCe---EEEEECCCCcccCEEEEEEE
Confidence 444555556677889999999999999999999999999988766544444443332 37999999999999999999
Q ss_pred EcCCCcceEEEEEEEec
Q psy7036 192 KNELGESNATISLNFDS 208 (254)
Q Consensus 192 ~~~~~~~~~~~~~~v~~ 208 (254)
.|..|....++.|.|..
T Consensus 82 ~n~~g~~~~~~~l~V~~ 98 (100)
T 2kdg_A 82 KNRAGEATFTVQLDVLA 98 (100)
T ss_dssp EETTEEEEEEEEEEEEC
T ss_pred EcCCCeEEEEEEEEEEe
Confidence 99999988888888763
No 312
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.68 E-value=5.1e-16 Score=94.67 Aligned_cols=84 Identities=18% Similarity=0.330 Sum_probs=70.9
Q ss_pred CCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEE
Q psy7036 7 FAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKV 86 (254)
Q Consensus 7 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 86 (254)
..+.|...|....+.+|++++|.|.+.|.|.+.+.|+|++..+...... .|.|.+++..|+|.|+|
T Consensus 2 ~~~~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~--------------~L~i~~v~~~d~G~Y~C 67 (91)
T 3bfo_A 2 SKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHETKK--------------LYMVPYVDLEHQGTYWC 67 (91)
T ss_dssp CCCEEEECCCCEEECTTSCEEEECEEECSSCCEEEEEETTEECTTCCSS--------------EEEESSCCGGGCEEEEE
T ss_pred CceEEEECCCccEecCCCcEEEEEEeccCCCCEEEEEcCCeeCCcCCCC--------------eEEECCCCHHhCEEEEE
Confidence 4678889999999999999999999999999999999999887654321 69999999999999999
Q ss_pred EEEcCCCceE-EEEEEEEe
Q psy7036 87 KAKNKMGEVA-ASINLNFS 104 (254)
Q Consensus 87 ~~~~~~~~~~-~~~~l~v~ 104 (254)
.+.|..|... ..+.|.|.
T Consensus 68 ~a~n~~g~~~s~~~~l~V~ 86 (91)
T 3bfo_A 68 HVYNDRDSQDSKKVEIIID 86 (91)
T ss_dssp EEECSSCEEECCCEEEEEC
T ss_pred EEEcCCCCEEeeeEEEEEe
Confidence 9999988643 45666664
No 313
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.68 E-value=7.5e-16 Score=95.53 Aligned_cols=93 Identities=27% Similarity=0.411 Sum_probs=74.5
Q ss_pred CCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEE
Q psy7036 112 APTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTA 191 (254)
Q Consensus 112 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~ 191 (254)
+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+............++ ...|.|.+++.+|+|.|+|.|
T Consensus 5 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~---~~~L~i~~v~~~D~G~Y~C~a 81 (99)
T 1g1c_A 5 APKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDN---VCELVIRDVTGEDSASIMVKA 81 (99)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEEETT---EEEEEECSCCGGGCEEEEEEE
T ss_pred CCceEecCcceEEcCCCcEEEEEEEEEeCCCEEEEEECCEECCCCCCEEEEEcCCC---EEEEEECCCCcCCCEEEEEEE
Confidence 34444555667788999999999999999999999999998876554443322222 237999999999999999999
Q ss_pred EcCCCcceEEEEEEEe
Q psy7036 192 KNELGESNATISLNFD 207 (254)
Q Consensus 192 ~~~~~~~~~~~~~~v~ 207 (254)
.|..|....++.|.|.
T Consensus 82 ~N~~g~~~~~~~l~V~ 97 (99)
T 1g1c_A 82 INIAGETSSHAFLLVQ 97 (99)
T ss_dssp EETTEEEEEEEEEEEE
T ss_pred EECCCcEEEEEEEEEe
Confidence 9999988888888775
No 314
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.68 E-value=1e-16 Score=112.27 Aligned_cols=126 Identities=15% Similarity=0.170 Sum_probs=80.6
Q ss_pred CCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEE
Q psy7036 112 APTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTA 191 (254)
Q Consensus 112 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~ 191 (254)
+|.+...+. ..+.+|+.++|.|.+.+.+. .+.|+|++..+....... ........|.|.+++.+|+|.|+|.+
T Consensus 5 ~P~i~~~p~-~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~-----~~~~~~~~L~i~~v~~~D~G~Y~C~a 77 (196)
T 2d3v_A 5 KATLWAEPG-SVISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDTQNP-----LEPKNKARFSIPSMTEHHAGRYRCYY 77 (196)
T ss_dssp BCEEEEESC-SEEETTCCEEEEEECCTTCC-EEEEEETTCSSCSEEECC-----CSSTTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCEEEeCCC-CcccCCCeEEEEEeCCCCCc-EEEEEECCCCCCcccccc-----cCCccccEEEeccCChhHCeEEEEEE
Confidence 344443343 36778999999999887765 999999987664221100 00111237999999999999999999
Q ss_pred EcCCCcc--eEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEeccCCCceeC
Q psy7036 192 KNELGES--NATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEPEPTISW 254 (254)
Q Consensus 192 ~~~~~~~--~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p~p~~~W 254 (254)
.|..+.. +..+.|.|... ..+|.+...+. ..+.+|+ .++|.|.+.+.| +.+.|
T Consensus 78 ~n~~g~~~~s~~~~l~V~~~-------~~~p~i~~~~~-~~v~~G~-~v~L~C~~~~~p-~~~~W 132 (196)
T 2d3v_A 78 YSPAGWSEPSDPLELVVTGF-------YNKPTLSALPS-PVVTSGE-NVTLQCGSRLRF-DRFIL 132 (196)
T ss_dssp EETTEECBCCCCEEEEEECS-------SCCCEEEC-------------CEEEEEESSCC-SEEEE
T ss_pred eCCCCcCCcCccEEEEecCC-------CCCCeEEccCC-ccccCCC-cEEEEEEcCCCC-CEEEE
Confidence 9987643 34566666641 12466665544 4678898 999999999998 88888
No 315
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.68 E-value=3.3e-16 Score=93.51 Aligned_cols=80 Identities=18% Similarity=0.276 Sum_probs=63.8
Q ss_pred CCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEEEEEcCCCc
Q psy7036 15 PQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKVKAKNKMGE 94 (254)
Q Consensus 15 ~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 94 (254)
+..+.+.+|+++.|.|.+.+ |.+.++|+|||..+....++.+... + ..+.|.|.+++..|+|.|+|.+.|
T Consensus 3 lt~v~~~~G~~v~l~C~vs~-p~p~v~W~k~g~~l~~~~~~~~~~~--~---~~~~L~I~~~~~~D~G~Y~C~a~n---- 72 (84)
T 2lu7_A 3 MTRVRSTPGGDLELVVHLSG-PGGPVRWYKDGERLASQGRVQLEQA--G---ARQVLRVQGARSGDAGEYLCDAPQ---- 72 (84)
T ss_dssp CCCEEECTTSCEEEECCCSC-CSTTCEEEETTEECCCCSSEEEEEC--S---SCEEEEESSCSSTTCEEEEEECTT----
T ss_pred CeEEEEecCCCEEEEEEECC-CCcEEEEEECCEEccccccEEEeec--C---CeEEEEecCCCCcccEEEEEEECC----
Confidence 35678899999999999975 8889999999999988777655432 2 223799999999999999998754
Q ss_pred eEEEEEEEEe
Q psy7036 95 VAASINLNFS 104 (254)
Q Consensus 95 ~~~~~~l~v~ 104 (254)
....+.|.|.
T Consensus 73 ~~~~a~l~V~ 82 (84)
T 2lu7_A 73 DSRIFLVSVE 82 (84)
T ss_dssp TCEEEEEEEC
T ss_pred EEEEEEEEEE
Confidence 4556677774
No 316
>3u1s_H FAB PGT145 heavy chain; IGG, broadly neutralizing antibody, HIV-1 GP120, immune SYST; HET: TYS; 2.30A {Homo sapiens}
Probab=99.68 E-value=1.2e-15 Score=111.89 Aligned_cols=185 Identities=12% Similarity=0.212 Sum_probs=107.5
Q ss_pred CCceeecCCCeEEEEEEEee--CCCCceEEEeCC-----EEe-ee-----------CCcceEEEeecCCcceEEEEEEec
Q psy7036 15 PQLRQEDEGNRLIFECQLLC--NPKPDIVWFRGE-----TQL-SE-----------DTRTVMKTTPIGTNKYLVALELDD 75 (254)
Q Consensus 15 ~~~~~v~~g~~v~l~C~~~~--~~~~~v~W~~~~-----~~~-~~-----------~~~~~~~~~~~~~~~~~~~l~i~~ 75 (254)
+....+.+|++|+|.|.+.+ .....+.|||.. ..+ .. ....++....+. .....+|.|.+
T Consensus 30 ~~~~~~~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~-~~~~~sL~I~~ 108 (267)
T 3u1s_H 30 SGAEVKKPGSSVKVSCKASGNSFSNHDVHWVRQATGQGLEWMGWMSHEGDKTGLAQKFQGRVTITRDS-GASTVYMELRG 108 (267)
T ss_dssp CCCEEECTTCCEEEEEEEGGGGGGTSEEEEEEECTTSCCEEEEEECTTSSCEEECGGGTTTEEEEECG-GGCCEEEEECS
T ss_pred eCCEEEeCCCcEEEEEEeeCCccCCCEEEEEEECCCCCcEEEEEEeCCCCceecCcccCCcEEEEEcC-CCCEEEEEECC
Confidence 34578999999999999965 235689999732 111 10 001122221111 22345799999
Q ss_pred cCCCCCeEEEEEEEcC------CC------------c-------eEEEEEEEEeccccCCCCCccccCCCeeeecCCCeE
Q psy7036 76 VIETDAGLYKVKAKNK------MG------------E-------VAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRL 130 (254)
Q Consensus 76 ~~~~d~G~Y~C~~~~~------~~------------~-------~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~ 130 (254)
++.+|+|.|.|.+.+. .+ . ......|.|... ...+|.+...........|..+
T Consensus 109 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~l~V~~~--~~~~P~v~~~~~~~~~~~g~~~ 186 (267)
T 3u1s_H 109 LTADDTAIYYCLTGSKHRLRDYFLYNEYGPNYEEWGDYLATLDVWGHGTAVTVSSA--STKGPSVFPLAPSSKSTSGGTA 186 (267)
T ss_dssp CCGGGCEEEEEEEEEEEEEEEEEECCTTSSCEEEEEEEEEEEEEECCCEEEEECCC--CCBCCEEEEECCCGGGEETTEE
T ss_pred CChhhCEEEEEEECcCCcccccccccccccccccccccccccceecCCeEEEecCC--CCCCCEEEEecCCcccCCCCcE
Confidence 9999999999998620 00 0 111334555421 1123333321111223468999
Q ss_pred EEEEEEeeC-C-CCeEEEEECCEecccCCc-ceEEEcCCC-CceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEE
Q psy7036 131 LFECRIQAD-P-APTVIWSHSGVQVKEDKR-HKFSIDKDG-HSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLN 205 (254)
Q Consensus 131 ~l~C~~~~~-~-~~~~~W~~~~~~~~~~~~-~~~~~~~~~-~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~ 205 (254)
.|.|.+.+. | .+.+.| ++..+..... .......++ +...+.|.|.....+| +.|+|.+.+..+.......+.
T Consensus 187 ~l~C~~~~~~p~~~~v~W--~~~~~~~~~~~~~~~~~~~g~y~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~ 262 (267)
T 3u1s_H 187 ALGCLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVE 262 (267)
T ss_dssp EEEEEEEEEBSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGGGT-CCCEEEEEEGGGTEEEEEECC
T ss_pred EEEEEEeEEECCCeEEEE--CCcccCCCEEeCCceECCCCCEEEEEEEEECchhcCC-CEEEEEEEECCCCcceEEEcc
Confidence 999998874 4 457999 5544432111 111122222 2344678998888888 999999999876655554443
No 317
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.67 E-value=5.3e-16 Score=110.06 Aligned_cols=126 Identities=17% Similarity=0.257 Sum_probs=86.8
Q ss_pred CCeeeecCCCeEEEEEEEeeCCCCeEEEEECC--Ee---cccC-------CcceEEEcCCCCceeeEEEEccCCCCCcee
Q psy7036 119 PSIRQEDDGKRLLFECRIQADPAPTVIWSHSG--VQ---VKED-------KRHKFSIDKDGHSYFASLEIIDVTIEDAGK 186 (254)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~--~~---~~~~-------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 186 (254)
+....+.+|+.+.|.|.+.+.+.+.+.|+|+. .. +... ...++.....+ ....|.|.+++.+|+|.
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~L~I~~v~~~D~G~ 85 (213)
T 3nl4_L 8 PASVSEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSG--TDFTLTISDLECADAAT 85 (213)
T ss_dssp CSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET--TEEEEEECSCCGGGCEE
T ss_pred CCeEEEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCC--CEEEEEECCCChHHCEE
Confidence 45677889999999999999988999999842 11 1000 01111111111 12379999999999999
Q ss_pred EEEEEEcCCCc---ceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEec-cCCCceeC
Q psy7036 187 YKVTAKNELGE---SNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVG-EPEPTISW 254 (254)
Q Consensus 187 y~C~~~~~~~~---~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~-~p~p~~~W 254 (254)
|+|.+.|..+. ......+.|.. ...+|.+...+....+.+|+ .+.|.|.+.+ .|.|.++|
T Consensus 86 Y~C~~~~~~~~~~~~~~~~~l~V~~-------~~~~p~v~~~~~~~~~~~g~-~v~l~C~~~g~~P~~~v~W 149 (213)
T 3nl4_L 86 YYCQSTYENPTYVSFGGGTEVGVKG-------DPVAPTVLIFPPSADLVATG-TVTIVCVANKYFPDVTVTW 149 (213)
T ss_dssp EEEEECCSSTTTCEECCCEEEEEEC-------CCBCCEEEEECCCHHHHTTS-EEEEEEEEEEEBSCCEEEE
T ss_pred EEEecCCCCceeEEeCCCeEEEEeC-------CCcCCeEEEeCCchhhccCC-cEeEEEEEecccCCcEEEE
Confidence 99999997763 23344555543 12356666555555667788 9999999998 89899998
No 318
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.67 E-value=2.5e-16 Score=95.55 Aligned_cols=86 Identities=13% Similarity=0.258 Sum_probs=64.8
Q ss_pred CCeeEeCCCcee--ecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEE
Q psy7036 8 APSFTQKPQLRQ--EDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYK 85 (254)
Q Consensus 8 ~p~~~~~~~~~~--v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 85 (254)
||.|..+++... +.+|+++.|.|.+.+ |.+.++|+|||..+....++.+... + ..+.|.|.+++.+|+|.|+
T Consensus 4 P~~i~~p~~~~~v~~~~g~~v~l~C~v~~-p~~~v~W~k~g~~i~~~~~~~i~~~--~---~~~~L~I~~v~~~D~G~Y~ 77 (91)
T 2lvc_A 4 PVHIVDPREHVFVHAITSECVMLACEVDR-EDAPVRWYKDGQEVEESDFVVLENE--G---PHRRLVLPATQPSDGGEFQ 77 (91)
T ss_dssp CCCCCBCCSCEEEECCTTCCEEEEEECSC-TTSCCEEEETTSCCCCCSSCEEEEE--T---TEEEEEESSCCGGGCSEEE
T ss_pred CcEEeccCCCeEEEEECCCcEEEEEEECC-CCcEEEEEECCEEeeeeeeeeEEec--C---CeEEEEeCCCChhhcEEEE
Confidence 555665555544 468999999999965 8889999999999988777665433 1 2337999999999999999
Q ss_pred EEEEcCCCceEEEEEEEE
Q psy7036 86 VKAKNKMGEVAASINLNF 103 (254)
Q Consensus 86 C~~~~~~~~~~~~~~l~v 103 (254)
|.|.|. ..++.|.|
T Consensus 78 C~a~n~----~~~~~ltV 91 (91)
T 2lvc_A 78 CVAGDE----CAYFTVTI 91 (91)
T ss_dssp EECSSC----EEEEEEEC
T ss_pred EEEcce----EEEEEEEC
Confidence 998653 44555543
No 319
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.67 E-value=1.3e-15 Score=95.11 Aligned_cols=91 Identities=16% Similarity=0.262 Sum_probs=70.3
Q ss_pred CCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEE
Q psy7036 7 FAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKV 86 (254)
Q Consensus 7 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 86 (254)
.++.|...+....+.+|++++|.|.+.+ +.+.+.|+|++..+....+.++.....+ ....|.|.+++..|+|.|+|
T Consensus 6 ~p~~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~l~~~~~~~~~~~~~~---~~~~L~I~~~~~~D~G~Y~C 81 (103)
T 1x44_A 6 SGIMVTKQLEDTTAYCGERVELECEVSE-DDANVKWFKNGEEIIPGPKSRYRIRVEG---KKHILIIEGATKADAAEYSV 81 (103)
T ss_dssp SSCCCSBCCCCEEEETTEEEEEEEECSS-SSCCCEEEETTEECCCSTTCSEEEEEET---TEEEEEEEEECTTTCSEEEE
T ss_pred CCceeeccCCCEEEECCCCEEEEEEecC-CCCeEEEEECCEECCCCCceEEEEEEcC---CEEEEEECCCCcccCEEEEE
Confidence 3445888889999999999999999976 6689999999999877663322222222 13379999999999999999
Q ss_pred EEEcCCCceEEEEEEEEec
Q psy7036 87 KAKNKMGEVAASINLNFSR 105 (254)
Q Consensus 87 ~~~~~~~~~~~~~~l~v~~ 105 (254)
.+.| ....+.|.|..
T Consensus 82 ~a~n----~~~~~~l~V~~ 96 (103)
T 1x44_A 82 MTTG----GQSSAKLSVDL 96 (103)
T ss_dssp EETT----EEEEEEEEEEC
T ss_pred EECC----CcEEEEEEEeC
Confidence 9986 45667777763
No 320
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.67 E-value=2e-16 Score=103.66 Aligned_cols=86 Identities=22% Similarity=0.413 Sum_probs=68.6
Q ss_pred CCCceeecCCCeEEEEEEEeeCCCCceEEEeCC----------------------------EEee-eCCcceEEEeecCC
Q psy7036 14 KPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGE----------------------------TQLS-EDTRTVMKTTPIGT 64 (254)
Q Consensus 14 ~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~----------------------------~~~~-~~~~~~~~~~~~~~ 64 (254)
.|....+.+|++++|.|.+.|.|.|.++|+|++ ..+. ...+..+... +
T Consensus 24 ~p~~~~v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~--~- 100 (139)
T 1gxe_A 24 IPDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETT--K- 100 (139)
T ss_dssp CCCEEEESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEE--T-
T ss_pred CCCCEEEeCCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeC--C-
Confidence 367788999999999999999999999999998 3331 2233333221 1
Q ss_pred cceEEEEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEEe
Q psy7036 65 NKYLVALELDDVIETDAGLYKVKAKNKMGEVAASINLNFS 104 (254)
Q Consensus 65 ~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~ 104 (254)
..+.|.|.+++..|+|.|+|.+.|..|.....+.|.|.
T Consensus 101 --~~s~L~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V~ 138 (139)
T 1gxe_A 101 --DRSIFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVI 138 (139)
T ss_dssp --TEEEEECSCCCTTTCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred --CEEEEEECCCCcccCEEEEEEEEeCCceEEEEEEEEEE
Confidence 23479999999999999999999999998888888874
No 321
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.67 E-value=2e-15 Score=93.72 Aligned_cols=91 Identities=23% Similarity=0.401 Sum_probs=73.1
Q ss_pred CCCCCeeEeCCCc-eeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeE
Q psy7036 5 EDFAPSFTQKPQL-RQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGL 83 (254)
Q Consensus 5 ~~~~p~~~~~~~~-~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 83 (254)
...+|.|...+.. ..+.+|++++|.|.+. .|.+.+.|||++..+....++.+... + ....|.|.+++..|+|.
T Consensus 4 g~~~p~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~W~k~g~~i~~~~~~~~~~~--~---~~~~L~I~~~~~~D~G~ 77 (100)
T 2yuv_A 4 GSSGAAFAKILDPAYQVDKGGRVRFVVELA-DPKLEVKWYKNGQEIRPSTKYIFEHK--G---CQRILFINNCQMTDDSE 77 (100)
T ss_dssp SSSSCCEEECCCSCEEECTTEEEEEEEEES-CTTSCEEEEESSCBCCCBTTEEEEEE--T---TEEEEEEEEECTTTCCE
T ss_pred CCCCCeEEecCCCccEEcCCCcEEEEEEec-CCCceEEEEECCEECCCCCCEEEEec--C---CEEEEEEcCCCcCcCEE
Confidence 3458899988877 5789999999999998 78899999999998877666554422 1 12379999999999999
Q ss_pred EEEEEEcCCCceEEEEEEEEec
Q psy7036 84 YKVKAKNKMGEVAASINLNFSR 105 (254)
Q Consensus 84 Y~C~~~~~~~~~~~~~~l~v~~ 105 (254)
|+|.+ +.....+.|.|.+
T Consensus 78 Y~C~a----g~~~~~~~l~V~~ 95 (100)
T 2yuv_A 78 YYVTA----GDEKCSTELFVRS 95 (100)
T ss_dssp EEEEE----TTEEEEEEEEECC
T ss_pred EEEEE----CCceEEEEEEEec
Confidence 99999 5566778888863
No 322
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.66 E-value=2.1e-16 Score=110.66 Aligned_cols=126 Identities=16% Similarity=0.224 Sum_probs=87.1
Q ss_pred CCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEE
Q psy7036 112 APTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTA 191 (254)
Q Consensus 112 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~ 191 (254)
+|.+...+.. .+.+|+.++|.|.+.+ +.+.+.|+|++..+....... .. ......|.|.+++.+|+|.|+|.+
T Consensus 5 ~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~--~~---~~~~~~L~i~~v~~~D~G~Y~C~a 77 (196)
T 3p2t_A 5 KPTLWAEPGS-VISWGNSVTIWCQGTL-EAREYRLDKEESPAPWDRQNP--LE---PKNKARFSIPSMTEDYAGRYRCYY 77 (196)
T ss_dssp CCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTSCSCSEEECC--CS---SSSEEEEEESSCCGGGCEEEEEEE
T ss_pred CCEEEccCCC-cCCCCCcEEEEeeCCC-CCCEEEEEECCCCCccccccc--cc---CCceEEEEeccCCcccCceEEEEE
Confidence 3444444444 6778999999999877 678999999987764321100 00 011237999999999999999999
Q ss_pred EcCCCc--ceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEeccCCCceeC
Q psy7036 192 KNELGE--SNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEPEPTISW 254 (254)
Q Consensus 192 ~~~~~~--~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p~p~~~W 254 (254)
.|..+. ....+.|.|... ..+|.+...+.. .+.+|+ .++|.|.+.+.| +.+.|
T Consensus 78 ~n~~g~~~~s~~~~l~V~~~-------~~~p~~~~~~~~-~v~~G~-~v~L~C~~~~~~-~~~~w 132 (196)
T 3p2t_A 78 RSPVGWSQPSDPLELVMTGA-------YSKPTLSALPSP-LVTSGK-SVTLLCQSRSPM-DTFLL 132 (196)
T ss_dssp EETTEEBCCCCCEEEEEECS-------SCCCEEEEESCS-EECTTC-CEEEEEEEEEEE-EEEEE
T ss_pred eCCCcccCCCccEEEEecCC-------CCCCEEEeCCcc-eecCCC-eEEEEEecCCCC-CEEEE
Confidence 998872 355566666531 225666655554 567898 999999998744 46666
No 323
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.66 E-value=1.4e-15 Score=97.45 Aligned_cols=92 Identities=21% Similarity=0.417 Sum_probs=75.4
Q ss_pred CCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEE
Q psy7036 111 LAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVT 190 (254)
Q Consensus 111 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~ 190 (254)
.+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+...... +....++ .|.|.+++.+|+|.|+|.
T Consensus 7 ~pP~i~~~p~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~~~~~-~~~~~~~-----~L~i~~v~~~D~G~Y~C~ 80 (118)
T 2eo9_A 7 GPPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSR-IKQLENG-----VLQIRYAKLGDTGRYTCI 80 (118)
T ss_dssp CSCCCSBCCCCEEEETTCEEEEECBCCCSSCCEEEEEESSSBCCTTSTT-EEEEETT-----EEEEESCCGGGCCCEEEE
T ss_pred CCCEEEcCCCCEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCe-EEEccCC-----EEEEccCCcCCCEEEEEE
Confidence 5666776777788899999999999999999999999999887643322 2223333 799999999999999999
Q ss_pred EEcCCCcceEEEEEEEec
Q psy7036 191 AKNELGESNATISLNFDS 208 (254)
Q Consensus 191 ~~~~~~~~~~~~~~~v~~ 208 (254)
|.|..|.....+.|.|..
T Consensus 81 a~n~~g~~~~~~~l~V~~ 98 (118)
T 2eo9_A 81 ASTPSGEATWSAYIEVQE 98 (118)
T ss_dssp EECSSCEEEEECCEEEEC
T ss_pred EEcCCCcEEEEEEEEEEe
Confidence 999999888888888875
No 324
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.66 E-value=1.3e-15 Score=93.70 Aligned_cols=88 Identities=24% Similarity=0.398 Sum_probs=71.1
Q ss_pred CCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEE
Q psy7036 7 FAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKV 86 (254)
Q Consensus 7 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 86 (254)
..|.|...+....+.+|+++.|.|.+ +.+.+.+.|+|++..+....++.+... + ....|.|.+++..|+|.|+|
T Consensus 7 ~~~~~~~~~~~~~v~~G~~v~l~C~~-~~p~~~v~W~k~~~~l~~~~~~~~~~~--~---~~~~L~I~~v~~~D~G~Y~C 80 (95)
T 2k1m_A 7 PVSAFSKKPRSVEVAAGSPAVFEAET-ERAGVKVRWQRGGSDISASNKYGLATE--G---TRHTLTVREVGPADQGSYAV 80 (95)
T ss_dssp CCCCCSBCCCCEEEETTSCEEEEEEC-SSSSCCCEEECSSSEECSSTTCEEEEE--T---TEEEEEESSCCTTCCSEEEE
T ss_pred CCCeeEeCCCcEEEeCCCcEEEEEEe-CCCCCeEEEEECCEECCCCCcEEEEEc--C---CEEEEEEcCCCcccCEEEEE
Confidence 35788888999999999999999999 688889999999999877666655432 1 13379999999999999999
Q ss_pred EEEcCCCceEEEEEEEEe
Q psy7036 87 KAKNKMGEVAASINLNFS 104 (254)
Q Consensus 87 ~~~~~~~~~~~~~~l~v~ 104 (254)
.+ |.....+.|.|.
T Consensus 81 ~a----g~~~~~~~l~V~ 94 (95)
T 2k1m_A 81 IA----GSSKVKFDLKVI 94 (95)
T ss_dssp EE----TTEEEEEEEEEE
T ss_pred EE----CCceEEEEEEEe
Confidence 99 445566777764
No 325
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.66 E-value=7.5e-16 Score=108.48 Aligned_cols=113 Identities=13% Similarity=0.257 Sum_probs=84.6
Q ss_pred ccccCCCeeeecCCCeEEEEEEEeeCCCCe-EEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEE
Q psy7036 114 TFLKKPSIRQEDDGKRLLFECRIQADPAPT-VIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAK 192 (254)
Q Consensus 114 ~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~-~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~ 192 (254)
.+...+....+.+|+.+.|.|.+.+.+.+. +.|++++..+.... ..|.|.+++.+|+|.|+|.+.
T Consensus 9 ~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~~~--------------~~L~i~~v~~~D~G~Y~C~a~ 74 (204)
T 3sgj_C 9 VVFLEPQWYRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQA--------------SSYFIDAATVDDSGEYRCQTQ 74 (204)
T ss_dssp EEEEESCCSEEETTCCEEEEEECCSSSSCCCEEEEETTEEESCCS--------------SEEEESSCCGGGCEEEEEEET
T ss_pred eEEEcCCCeEEECCCCEEEEEcCCCCCCCcEEEEEECCEEcccCc--------------cEEEEecccccCCEEEEEEeC
Confidence 333444445678999999999999988775 99999998775432 279999999999999999998
Q ss_pred cCCCcceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEecc-CCCceeC
Q psy7036 193 NELGESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGE-PEPTISW 254 (254)
Q Consensus 193 ~~~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~-p~p~~~W 254 (254)
|.. ....+.|.|.. +|.+...+. ..+.+|+ .+.|.|.+.+. |.+.+.|
T Consensus 75 n~~--~s~~~~l~V~~----------~p~~~~~~~-~~v~~G~-~v~L~C~~~~~~p~~~v~W 123 (204)
T 3sgj_C 75 LST--LSDPVQLEVHI----------GWLLLQAPR-WVFKEED-PIHLRCHSWKNTALHKVTY 123 (204)
T ss_dssp TSB--CCCCEEEEEEC----------SSEEEECSC-SEEETTC-CEEEEEEEGGGCCCEEEEE
T ss_pred CCc--ccccEEEEEec----------CceEecCCc-eeEeCCC-cEEEEEEecCCCCCceEEE
Confidence 743 34455566653 344544444 5677898 99999999766 5577888
No 326
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.66 E-value=8.8e-16 Score=94.02 Aligned_cols=89 Identities=22% Similarity=0.344 Sum_probs=70.1
Q ss_pred CCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECC--EecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEE
Q psy7036 112 APTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSG--VQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKV 189 (254)
Q Consensus 112 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C 189 (254)
+|.+...+....+..|+.+.|.|.+.|.|.|.+.|++++ ..+.... ....... .+.|.|.++..+|+|.|+|
T Consensus 2 ~P~i~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~~--~~~~~~~----~~~L~i~~~~~~D~G~Y~C 75 (93)
T 1wit_A 2 KPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPEL--LVDAKSS----TTSIFFPSAKRADSGNYKL 75 (93)
T ss_dssp CCEECCCCCEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTTS--EEEEETT----EEEEECTTBCGGGCEEEEE
T ss_pred CCeEEcCCCceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCcE--EEEecCC----EEEEEECCCChhcCEEEEE
Confidence 344544556778889999999999999999999999999 7765432 2222111 2479999999999999999
Q ss_pred EEEcCCCcceEEEEEEE
Q psy7036 190 TAKNELGESNATISLNF 206 (254)
Q Consensus 190 ~~~~~~~~~~~~~~~~v 206 (254)
.|.|..|....++.|.|
T Consensus 76 ~a~N~~G~~~~~~~l~V 92 (93)
T 1wit_A 76 KVKNELGEDEAIFEVIV 92 (93)
T ss_dssp EEEETTEEEEEEEEEEE
T ss_pred EEEcCCCeEEEEEEEEE
Confidence 99999998888877766
No 327
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.65 E-value=1.8e-15 Score=94.46 Aligned_cols=93 Identities=25% Similarity=0.474 Sum_probs=75.2
Q ss_pred CCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEE
Q psy7036 112 APTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTA 191 (254)
Q Consensus 112 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~ 191 (254)
+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.......+..... ...|.|.++..+|.|.|+|.|
T Consensus 8 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~----~~~L~i~~~~~~D~G~Y~C~a 83 (103)
T 3qp3_A 8 APRITLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYTNTSG----VLTLEILDCHTDDSGTYRAVC 83 (103)
T ss_dssp EEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEETT----EEEEEECSCCGGGCEEEEEEE
T ss_pred CCEEEeCCcceEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCEEEEECCC----EEEEEEcCCCcccCEEEEEEE
Confidence 4445555566778899999999999999999999999999987665544432222 137999999999999999999
Q ss_pred EcCCCcceEEEEEEEec
Q psy7036 192 KNELGESNATISLNFDS 208 (254)
Q Consensus 192 ~~~~~~~~~~~~~~v~~ 208 (254)
.|..|.......|.|..
T Consensus 84 ~N~~G~~~~~~~l~V~~ 100 (103)
T 3qp3_A 84 TNYKGEASDYATLDVTG 100 (103)
T ss_dssp EETTEEEEEEEEEEEEC
T ss_pred EeCCCcEEEEEEEEEEC
Confidence 99999988888888864
No 328
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.65 E-value=1.4e-15 Score=110.45 Aligned_cols=124 Identities=15% Similarity=0.273 Sum_probs=87.4
Q ss_pred CeeeecCCCeEEEEEEEee---CCCCeEEEEECCEecc----------------------------cCCcceEEEcCCCC
Q psy7036 120 SIRQEDDGKRLLFECRIQA---DPAPTVIWSHSGVQVK----------------------------EDKRHKFSIDKDGH 168 (254)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~---~~~~~~~W~~~~~~~~----------------------------~~~~~~~~~~~~~~ 168 (254)
..+.+.+|+.+.|.|.+.+ .+.+.+.|++++.... .....+.....++
T Consensus 10 ~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~- 88 (250)
T 2fbo_J 10 TEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVANLA- 88 (250)
T ss_dssp SEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSCTT-
T ss_pred CceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEeccCC-
Confidence 4567889999999999987 7888999999874320 0001111111111
Q ss_pred ceeeEEEEccCCCCCceeEEEEEEcCCCcc-----eEEEEEEEecCCCCCCCCCCCCeee-cCCccccccCCCCcEEEEE
Q psy7036 169 SYFASLEIIDVTIEDAGKYKVTAKNELGES-----NATISLNFDSDDAPVPGEGTKPVFT-ERPVTKQSDDDLNDIVIEC 242 (254)
Q Consensus 169 ~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~~~p~~~-~~~~~~~~~~g~~~~~l~C 242 (254)
...|.|.+++.+|+|.|+|.+.|..+.. ...+.|.|..... +|.+. ..+....+.+|+ .+.|.|
T Consensus 89 --~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~-------~~~~~~~~~~~~~v~~g~-~v~L~C 158 (250)
T 2fbo_J 89 --APTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTP-------SNNVHVSTAEVVQVDEGN-DITMTC 158 (250)
T ss_dssp --SCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSC-------CSCCEECCCSEEECCTTC-CEEECC
T ss_pred --cceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCC-------CCeEEEecCceEEecCCC-cEEEEE
Confidence 1379999999999999999999987643 3467777764211 22222 334556677898 999999
Q ss_pred EEeccCCCceeC
Q psy7036 243 RLVGEPEPTISW 254 (254)
Q Consensus 243 ~~~~~p~p~~~W 254 (254)
.+.+.|.|.++|
T Consensus 159 ~~~g~p~p~v~W 170 (250)
T 2fbo_J 159 PCTDCANANVTW 170 (250)
T ss_dssp CEESCTTCEEEE
T ss_pred EecCCCCCeeEE
Confidence 999999999998
No 329
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.65 E-value=1.6e-15 Score=94.08 Aligned_cols=93 Identities=27% Similarity=0.464 Sum_probs=72.4
Q ss_pred CCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEE
Q psy7036 112 APTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTA 191 (254)
Q Consensus 112 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~ 191 (254)
+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+........ ...++. .+.|.|.+++.+|+|.|+|.|
T Consensus 5 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~~~~~~-~~~~~~--~~~L~i~~~~~~D~G~Y~C~a 81 (99)
T 1u2h_A 5 PPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFA-EEAEGG--LCRLRILAAERGDAGFYTCKA 81 (99)
T ss_dssp EEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCBTTEEE-EECGGG--EEEEEESSCCGGGCEEEEEEE
T ss_pred CCEEEEcCCceEecCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCCEEE-EECCCC--EEEEEEccCCcCCCEEEEEEE
Confidence 34444455566788999999999999999999999999998865543222 222221 237999999999999999999
Q ss_pred EcCCCcceEEEEEEEe
Q psy7036 192 KNELGESNATISLNFD 207 (254)
Q Consensus 192 ~~~~~~~~~~~~~~v~ 207 (254)
.|..|.....+.|.|.
T Consensus 82 ~N~~g~~~~~~~l~V~ 97 (99)
T 1u2h_A 82 VNEYGARQCEARLEVR 97 (99)
T ss_dssp EETTEEEEEEEEEEEE
T ss_pred EECCCceeEEEEEEEE
Confidence 9999988888888775
No 330
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.65 E-value=3.4e-15 Score=95.66 Aligned_cols=100 Identities=19% Similarity=0.269 Sum_probs=76.3
Q ss_pred CCCCCCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCC
Q psy7036 2 GIAEDFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDA 81 (254)
Q Consensus 2 ~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 81 (254)
.+.+..+|.+...... . ..+...|.|.+.|.|.+.++|+|+|..+....+......... ......|.|.+++..|+
T Consensus 2 ~L~V~~pP~i~~~~~~-~--~~~~~~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~-~~~~~~L~i~~~~~~d~ 77 (118)
T 1wwc_A 2 ALTVYYPPRVVSLEEP-E--LRLEHCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEG-EISEGCLLFNKPTHYNN 77 (118)
T ss_dssp --CCCCCCCCCCCCCC-C--CCCEEEEEEEEECSSCCEEEEEETTEECCCSSSEEEEEEECS-SEEEEEEEEESCCGGGC
T ss_pred EEEEecCCceeccCCC-e--eccceEEEEEeeeeCCCeEEEEECCEECCCCCceeEEEeccC-ccccEEEEECCCChhcC
Confidence 5677788887655332 2 336788999999999999999999999987665554433221 12344899999999999
Q ss_pred eEEEEEEEcCCCceEEEEEEEEec
Q psy7036 82 GLYKVKAKNKMGEVAASINLNFSR 105 (254)
Q Consensus 82 G~Y~C~~~~~~~~~~~~~~l~v~~ 105 (254)
|.|+|.+.|..|.....+.|.|..
T Consensus 78 G~Y~C~a~N~~G~~~~~~~l~v~~ 101 (118)
T 1wwc_A 78 GNYTLIAKNPLGTANQTINGHFLK 101 (118)
T ss_dssp EEEEEEEEETTEEEEEEEEECCSC
T ss_pred EEEEEEEECCCCeEeeEEEEEEcc
Confidence 999999999999988888887763
No 331
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.65 E-value=3.2e-15 Score=92.78 Aligned_cols=94 Identities=30% Similarity=0.607 Sum_probs=74.3
Q ss_pred CCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEE
Q psy7036 112 APTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTA 191 (254)
Q Consensus 112 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~ 191 (254)
+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+......++....+.. .+.|.|.++..+|.|.|+|.+
T Consensus 5 pP~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~--~~~L~i~~v~~~D~G~Y~C~a 82 (100)
T 3irg_A 5 PPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDD--LTTLIIMDVQKQDGGLYTLSL 82 (100)
T ss_dssp EEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSS--EEEEEESSCCGGGCEEEEEEE
T ss_pred CCeeecCCCcEEEcCCCcEEEEEEEEEcCCCceEEEECCEEeecCCCCEEEEEecCC--EEEEEEeecCcccCEEEEEEE
Confidence 445555566778889999999999999999999999999988644333333333221 247999999999999999999
Q ss_pred EcCCCcceEEEEEEEe
Q psy7036 192 KNELGESNATISLNFD 207 (254)
Q Consensus 192 ~~~~~~~~~~~~~~v~ 207 (254)
.|..|.....+.|.|.
T Consensus 83 ~n~~g~~~~~~~l~V~ 98 (100)
T 3irg_A 83 GNEFGSDSATVNIHIR 98 (100)
T ss_dssp EETTEEEEEEEEEEEE
T ss_pred EeCCCcEEEEEEEEEE
Confidence 9999998888888775
No 332
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.65 E-value=2.4e-16 Score=111.33 Aligned_cols=123 Identities=15% Similarity=0.272 Sum_probs=87.5
Q ss_pred cccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecc----------cCCcceEEEcCCCCceeeEEEEccCCCCCc
Q psy7036 115 FLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVK----------EDKRHKFSIDKDGHSYFASLEIIDVTIEDA 184 (254)
Q Consensus 115 ~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~----------~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 184 (254)
+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+. .....++.... ..|.|.+++.+|+
T Consensus 7 i~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~------~~L~i~~~~~~d~ 80 (209)
T 1nbq_A 7 VHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLP------TGITFKSVTREDT 80 (209)
T ss_dssp EECSCSBCCEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEET------TEEECSCCCTTSC
T ss_pred EEcCCCceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEeec------cEEEEeeCCHHHC
Confidence 3344556678889999999999998889999999875421 11111222222 3799999999999
Q ss_pred eeEEEEEEcCCCc--ceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEE-eccCCCceeC
Q psy7036 185 GKYKVTAKNELGE--SNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRL-VGEPEPTISW 254 (254)
Q Consensus 185 G~y~C~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~-~~~p~p~~~W 254 (254)
|.|+|.+.|..+. ....+.|.|.. +|.+...+....+.+|+ .+.|.|.+ .+.|.|.++|
T Consensus 81 G~Y~C~~~~~~g~~~~~~~~~l~V~~----------~p~~~~~~~~~~~~~g~-~~~l~C~~~~~~p~~~v~W 142 (209)
T 1nbq_A 81 GTYTCMVSEEGGNSYGEVKVKLIVLV----------PPSKPTVNIPSSATIGN-RAVLTCSEQDGSPPSEYTW 142 (209)
T ss_dssp SEEEEEEEETTSSCEECCEEECCEEB----------CCCCCCCCCBSEEETTS-CEEECCCCCSCBSCCEEEE
T ss_pred cEEEEEEecCCCCccceEEEEEEEec----------CCcCCCcccccceecCC-EEEEEEeCCCCCCCceeEE
Confidence 9999999998663 34455566654 22222223334577888 99999997 8999999998
No 333
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.65 E-value=6.9e-16 Score=96.94 Aligned_cols=92 Identities=18% Similarity=0.291 Sum_probs=73.4
Q ss_pred CCCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEE
Q psy7036 5 EDFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLY 84 (254)
Q Consensus 5 ~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 84 (254)
...+|.|...+....+.+|+++.|.|.+.+.+.+ +.|||++..+....++.+... + ....|.|.+++.+|+|.|
T Consensus 5 ~~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~-v~W~k~g~~~~~~~~~~~~~~--~---~~~~L~I~~v~~~D~G~Y 78 (106)
T 2dlt_A 5 SSGQLEVLQDIADLTVKAAEQAVFKCEVSDEKVT-GKWYKNGVEVRPSKRITISHV--G---RFHKLVIDDVRPEDEGDY 78 (106)
T ss_dssp SCCCCCEEECCCCEEEESSCCEECCCEESCSSCE-EEEEESSCBCCCCSSCEEEEE--T---TEEEEEESSCCTTTCSCE
T ss_pred CCCCCEEecCCCCeEEeCCCeEEEEEEEcCCCcc-eEEEcCCEECcCCCCEEEEEe--C---CEEEEEECCCCcCCCEEE
Confidence 3457899999999999999999999999987777 999999998877666655422 1 123799999999999999
Q ss_pred EEEEEcCCCceEEEEEEEEe
Q psy7036 85 KVKAKNKMGEVAASINLNFS 104 (254)
Q Consensus 85 ~C~~~~~~~~~~~~~~l~v~ 104 (254)
+|.+.|. .....+.|.|.
T Consensus 79 ~C~a~n~--~~~~~~~l~V~ 96 (106)
T 2dlt_A 79 TFVPDGY--ALSLSAKLNFL 96 (106)
T ss_dssp EEEEETS--CCCCCBCEEEE
T ss_pred EEEEccC--CceEEEEEEEE
Confidence 9999987 33344555554
No 334
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.65 E-value=2.6e-15 Score=103.98 Aligned_cols=107 Identities=18% Similarity=0.354 Sum_probs=81.5
Q ss_pred eecCCCeEEEEEEEeeCCCC--eEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceE
Q psy7036 123 QEDDGKRLLFECRIQADPAP--TVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNA 200 (254)
Q Consensus 123 ~~~~g~~~~l~C~~~~~~~~--~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~ 200 (254)
.+.+|+.+.|.|.+.+.+.+ .+.|++++..+........ ...|.|. +.+|+|.|+|.+.|. ...
T Consensus 9 ~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~~~~---------~~~l~i~--~~~d~G~Y~C~~~n~---~~~ 74 (184)
T 3b5h_A 9 VEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPGQ---------KTEFKVD--SDDQWGEYSCVFLPE---PMG 74 (184)
T ss_dssp EEEETTEEEEEEEEESCSSCCCEEEEESSSEEEECTTCCCS---------EEEEEEC--GGGCCEEEEEEEEST---TSC
T ss_pred EEecCCCEEEEEECCCCCCCceEEEEEeCCEEeecccccCC---------cEEEEEe--chhhCeEEEEEEECC---cCc
Confidence 45679999999999887777 8999999988764432111 1256666 688999999999982 335
Q ss_pred EEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEeccC-CCceeC
Q psy7036 201 TISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEP-EPTISW 254 (254)
Q Consensus 201 ~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p-~p~~~W 254 (254)
...|.|.. +|.+...+....+.+|+ .+.|.|.+.|.| .|.+.|
T Consensus 75 ~~~l~V~~----------~P~~~~~~~~~~~~~g~-~~~l~C~~~g~p~~~~i~W 118 (184)
T 3b5h_A 75 TANIQLHG----------PPRVKAVKSSEHINEGE-TAMLVCKSESVPPVTDWAW 118 (184)
T ss_dssp EEEEEECC----------SCCCEESCSEEEECTTS-CEEEEEECCCSSCCCEEEE
T ss_pred EEEEEEec----------CCceeecCCCcEEcCCC-cEEEEEEECCCCCCCeEEE
Confidence 55666653 56666666666788899 999999999999 788998
No 335
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.64 E-value=8.5e-15 Score=93.38 Aligned_cols=95 Identities=33% Similarity=0.544 Sum_probs=77.4
Q ss_pred CCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccC-CcceEEEcCCCCceeeEEEEccCCCCCceeEEE
Q psy7036 111 LAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKED-KRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKV 189 (254)
Q Consensus 111 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C 189 (254)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... ....+....++ .+.|.|.+++.+|+|.|+|
T Consensus 14 ~~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~---~~~L~I~~v~~~D~G~Y~C 90 (116)
T 2kkq_A 14 RAPMFIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDNTG---RVTLLIKDVNKKDAGWYTV 90 (116)
T ss_dssp BCCCBSSCCCCEEEETTEEEEEEEEBCCBSCCEEEEEETTEECCCCBTTEEEEECTTC---EEEEEEEEECGGGCEEEEE
T ss_pred CCCeEEeCCCcEEEeCCCcEEEEEEEeccCCCEEEEEECCEECcCCCCeEEEEeCCCC---eEEEEECCCCcccCEEEEE
Confidence 5677777788888999999999999999999999999999988643 23333222222 2479999999999999999
Q ss_pred EEEcCCCcceEEEEEEEec
Q psy7036 190 TAKNELGESNATISLNFDS 208 (254)
Q Consensus 190 ~~~~~~~~~~~~~~~~v~~ 208 (254)
.|.|..|.....+.|.|..
T Consensus 91 ~a~N~~G~~~~~~~l~V~~ 109 (116)
T 2kkq_A 91 SAVNEAGVTTCNTRLDVTA 109 (116)
T ss_dssp EEEETTEEEEEEEEEEEEC
T ss_pred EEEcCCCeEEEEEEEEEeC
Confidence 9999999988888888875
No 336
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.64 E-value=1.7e-15 Score=94.75 Aligned_cols=90 Identities=17% Similarity=0.282 Sum_probs=71.5
Q ss_pred CCCCCeeEeCCCc---eeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCC
Q psy7036 5 EDFAPSFTQKPQL---RQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDA 81 (254)
Q Consensus 5 ~~~~p~~~~~~~~---~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 81 (254)
...+|.+...|.. ..+.+|++++|.|.+.+.+.+ +.|+|++..+....++.+.... ....|.|.+++..|+
T Consensus 4 ~~~~P~~~~~p~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~g~~~~~~~~~~~~~~~-----~~~~L~I~~~~~~D~ 77 (104)
T 2e6p_A 4 GSSGPVHILSPQDKVSLTFTTSERVVLTCELSRVDFP-ATWYKDGQKVEESELLVVKMDG-----RKHRLILPEAKVQDS 77 (104)
T ss_dssp CCSSSCCCCBCCSCEEEEEESSSCEECCEECSSTTCC-CEEEETTEECCCBTTBEEEEET-----TEEEEEESSCCTTTC
T ss_pred CCCCCCEEECCCCCccEEEeCCCcEEEEEEecCCCCc-cEEeeCCEECCCCCCEEEEeCC-----CEEEEEECCCChhhC
Confidence 4457888777777 788999999999999988888 9999999998776666554321 233799999999999
Q ss_pred eEEEEEEEcCCCceEEEEEEEEe
Q psy7036 82 GLYKVKAKNKMGEVAASINLNFS 104 (254)
Q Consensus 82 G~Y~C~~~~~~~~~~~~~~l~v~ 104 (254)
|.|+|.+.|..+ .+.|.|.
T Consensus 78 G~Y~C~a~n~~~----~~~l~V~ 96 (104)
T 2e6p_A 78 GEFECRTEGVSA----FFGVTVQ 96 (104)
T ss_dssp EEEEEECSSCCC----CEEEEEE
T ss_pred EEEEEEECCceE----EEEEEEc
Confidence 999999988643 4566665
No 337
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.64 E-value=9.9e-17 Score=103.50 Aligned_cols=102 Identities=21% Similarity=0.363 Sum_probs=81.2
Q ss_pred CCCCCCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCc-eEEEeCCEEeee--CCcceEEEeecCCcceEEEEEEeccCC
Q psy7036 2 GIAEDFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPD-IVWFRGETQLSE--DTRTVMKTTPIGTNKYLVALELDDVIE 78 (254)
Q Consensus 2 ~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~-v~W~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~i~~~~~ 78 (254)
.+.+..+|.|.. +....+.+|+++.|.|.+.|.|.|. +.|++++..+.. ..++.+..... .....+.|.|.+++.
T Consensus 8 ~l~V~~~P~i~~-~~~~~~~~G~~v~l~C~~~g~P~p~~i~W~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~L~I~~v~~ 85 (122)
T 2cry_A 8 TLTVNGPPIISS-TQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETIST-EEGVISTLTISNIVR 85 (122)
T ss_dssp CCCCCSSCCEEE-ECCCCCCTTSCCCCCEEECCSSCCSEEEEESSSCEECSEEETTEEEEEEEE-TTEEEEEEECTTCCH
T ss_pred EEEEecCCCccC-CCeEEEecCCCEEEEEEEeecCCCcEeEEEECCEEccCCCCCCEEEEEecC-CCceEEEEEEcCCCh
Confidence 467778999988 8888899999999999999999987 999999988764 23443322211 122345899999999
Q ss_pred CCC-eEEEEEEEcCCCceEEEEEEEEec
Q psy7036 79 TDA-GLYKVKAKNKMGEVAASINLNFSR 105 (254)
Q Consensus 79 ~d~-G~Y~C~~~~~~~~~~~~~~l~v~~ 105 (254)
.|. |.|+|.+.|..|.....+.|.|.+
T Consensus 86 ~D~~G~Y~C~a~N~~G~~~~~~~l~V~~ 113 (122)
T 2cry_A 86 ADFQTIYNCTAWNSFGSDTEIIRLKEQG 113 (122)
T ss_dssp HHHHSCEEEEEECSSCEEEEEECCCCSC
T ss_pred hhCCceEEEEEECCCCeEEEEEEEEECC
Confidence 999 999999999999988888877753
No 338
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.64 E-value=8.8e-16 Score=97.15 Aligned_cols=96 Identities=30% Similarity=0.547 Sum_probs=78.5
Q ss_pred CCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEE
Q psy7036 111 LAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVT 190 (254)
Q Consensus 111 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~ 190 (254)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+............++. +.|.|.+++.+|.|.|+|.
T Consensus 8 ~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~---~~L~i~~v~~~D~G~Y~C~ 84 (110)
T 2dm3_A 8 FRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGV---HSLIIEPVTSRDAGIYTCI 84 (110)
T ss_dssp CCCEEEECCCEEEEESSSCBCCEEEEECSSCCEEECBBSSSBCCCCSSEEEEECTTSC---EEEEESSCCGGGCSBBCEE
T ss_pred CCCcEEeCCCcEEEeCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCceEEEEecCCe---EEEEEeeCCcccCEEEEEE
Confidence 4666666777788899999999999999999999999999887765544443333332 3799999999999999999
Q ss_pred EEcCCCcceEEEEEEEecC
Q psy7036 191 AKNELGESNATISLNFDSD 209 (254)
Q Consensus 191 ~~~~~~~~~~~~~~~v~~~ 209 (254)
|.|..|.....+.|.|...
T Consensus 85 a~n~~g~~~~~~~l~V~~~ 103 (110)
T 2dm3_A 85 ATNRAGQNSFSLELVVAAK 103 (110)
T ss_dssp EECSSCEEEECCEEEEECC
T ss_pred EECCCCEEEEEEEEEEeCC
Confidence 9999998888888888753
No 339
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.64 E-value=2e-15 Score=108.35 Aligned_cols=124 Identities=19% Similarity=0.356 Sum_probs=92.8
Q ss_pred CCCeeeecCCCeEEEEEEEeeCCC-CeEEEEECCEecc---------cCC--cceEE----------EcCCCCceeeEEE
Q psy7036 118 KPSIRQEDDGKRLLFECRIQADPA-PTVIWSHSGVQVK---------EDK--RHKFS----------IDKDGHSYFASLE 175 (254)
Q Consensus 118 ~~~~~~~~~g~~~~l~C~~~~~~~-~~~~W~~~~~~~~---------~~~--~~~~~----------~~~~~~~~~~~l~ 175 (254)
.+....+..|+.+.|.|.+.+.+. +.+.|++++.... ... ..++. ...++ .|.
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~-----~L~ 80 (231)
T 2pet_A 6 VPPLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQG-----RLV 80 (231)
T ss_dssp CCSEEEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTC-----CEE
T ss_pred CCCcEEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCc-----eEE
Confidence 345677889999999999988885 8899998654311 000 11121 22233 599
Q ss_pred EccCCCCCceeEEEEEEcCC-CcceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcE-EEEEEE-eccCCCce
Q psy7036 176 IIDVTIEDAGKYKVTAKNEL-GESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDI-VIECRL-VGEPEPTI 252 (254)
Q Consensus 176 i~~~~~~d~G~y~C~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~-~l~C~~-~~~p~p~~ 252 (254)
|.+++.+|+|.|+|.+.+.. +.....+.|.|... +..|.+...+....+.+|+ .+ .|.|.+ .+.|.|.+
T Consensus 81 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~-------p~~~~~~~~~~~~~~~~g~-~~~~l~C~~~~~~p~p~i 152 (231)
T 2pet_A 81 LAEAQVGDERDYVCVVRAGAAGTAEATARLNVFAK-------PEATEVSPNKGTLSVMEDS-AQEIATCNSRNGNPAPKI 152 (231)
T ss_dssp ESSCCGGGCEEEEEEEECGGGCEEEEEEEEEEEBC-------CCCCEEEECCSSCCTTCCS-EEEEEEEEEEEEBSCCEE
T ss_pred EcccCcccCceEEEEEEecCCCceEEEEEEEEEec-------CCCcEEecCCcceeecCCC-ceEEEEEEeECcccCCEE
Confidence 99999999999999999987 66677778887752 2346677777777788888 77 999999 89999999
Q ss_pred eC
Q psy7036 253 SW 254 (254)
Q Consensus 253 ~W 254 (254)
+|
T Consensus 153 ~W 154 (231)
T 2pet_A 153 TW 154 (231)
T ss_dssp EE
T ss_pred EE
Confidence 98
No 340
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.64 E-value=1.3e-15 Score=95.19 Aligned_cols=90 Identities=13% Similarity=0.267 Sum_probs=73.1
Q ss_pred CCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEE
Q psy7036 6 DFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYK 85 (254)
Q Consensus 6 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 85 (254)
..+|.|...+....+.+|++++|.|.+.+ +.+.+.|+|++..+....++.+... +. ...|.|.+++..|+|.|+
T Consensus 6 ~~pp~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~~~~~~~~~~~~~--~~---~~~L~I~~v~~~D~G~Y~ 79 (103)
T 2edf_A 6 SGPAAIIKPLEDQWVAPGEDVELRCELSR-AGTPVHWLKDRKAIRKSQKYDVVCE--GT---MAMLVIRGASLKDAGEYT 79 (103)
T ss_dssp CCCCCEEECCCCEEECTTSCEEECCEESS-SSCCCCEEESSCBCCCSSSEEEEEE--TT---EEEEEESSCCTTTCSEEE
T ss_pred CCCcEEEecCCccEEcCCCCEEEEEEEeC-CCCcEEEEECCEEccCCCCEEEEEC--CC---EEEEEECCCCcccCEEEE
Confidence 45788999999999999999999999986 7788999999998877665554422 21 347999999999999999
Q ss_pred EEEEcCCCceEEEEEEEEec
Q psy7036 86 VKAKNKMGEVAASINLNFSR 105 (254)
Q Consensus 86 C~~~~~~~~~~~~~~l~v~~ 105 (254)
|.+.| ....+.|.|..
T Consensus 80 C~a~n----~~~~~~l~V~~ 95 (103)
T 2edf_A 80 CEVEA----SKSTASLHVEE 95 (103)
T ss_dssp EECSS----CEEEEEEEECC
T ss_pred EEEcc----CCcEEEEEEeC
Confidence 99988 35667777763
No 341
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.64 E-value=3.3e-15 Score=105.93 Aligned_cols=125 Identities=16% Similarity=0.231 Sum_probs=86.1
Q ss_pred eeeecCCCeEEEEEEEeeCCCCeEEEEEC--CEecc---c-C------CcceEEEcCCCCceeeEEEEccCCCCCceeEE
Q psy7036 121 IRQEDDGKRLLFECRIQADPAPTVIWSHS--GVQVK---E-D------KRHKFSIDKDGHSYFASLEIIDVTIEDAGKYK 188 (254)
Q Consensus 121 ~~~~~~g~~~~l~C~~~~~~~~~~~W~~~--~~~~~---~-~------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~ 188 (254)
...+.+|+.+.|.|.+.+.+.+.+.|+|. +.... . . ...++..... .....|.|.+++.+|+|.|+
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~--~~~~~L~I~~v~~~D~G~Y~ 86 (213)
T 3mj8_L 9 LVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNS--GNMATLTISKAQAGDEADYY 86 (213)
T ss_dssp EEEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEE--TTEEEEEESSCCGGGCEEEE
T ss_pred cEEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEec--CCEEEEEECCCChhhCEEEE
Confidence 67788999999999999889999999983 21110 0 0 0111111111 11247999999999999999
Q ss_pred EEEEcCCC---cceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEecc-CC-CceeC
Q psy7036 189 VTAKNELG---ESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGE-PE-PTISW 254 (254)
Q Consensus 189 C~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~-p~-p~~~W 254 (254)
|.+.|..+ .......|.|... ...+|.+...+....+.+|+ .+.|.|.+.|. |+ +.++|
T Consensus 87 C~~~~~~~~~~~~~~~~~l~V~~~------~~~~P~i~~~~~~~~~~~g~-~v~l~C~~~g~~p~~~~v~W 150 (213)
T 3mj8_L 87 CQSWDGTNSAWVFGSGTKVTVLGQ------PNAAPSVTLFPPSSEELKTN-QATLVCMINGFYPADVAVTW 150 (213)
T ss_dssp EEEEETTTTEEEEBCCEEEEEECS------CCBCCEEEEECCCHHHHTTT-EEEEEEEEEEEBSSCCEEEE
T ss_pred EEeccCCcceeEEcCceEEEEeCC------CCCCCeEEccCCCcccccCC-cEEEEEEeeceeCCCeEEEE
Confidence 99999887 3345566666631 11366676666555566888 99999999986 44 37888
No 342
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.64 E-value=3.6e-15 Score=92.42 Aligned_cols=92 Identities=25% Similarity=0.397 Sum_probs=73.8
Q ss_pred CCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEE
Q psy7036 112 APTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTA 191 (254)
Q Consensus 112 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~ 191 (254)
+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+.......+..... .+.|.|.++..+|+|.|+|.|
T Consensus 6 ~P~i~~~~~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~a 81 (99)
T 3puc_A 6 KPVIVTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQGGKYKLSEDKG----GFFLEIHKTDTSDSGLYTCTV 81 (99)
T ss_dssp EEEEEECCCCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCSSSSEEEEEETT----EEEEEECSCCGGGCEEEEEEE
T ss_pred CCEEEecCccEEEeCCCcEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEeCC----EEEEEECCCCcccCEEEEEEE
Confidence 3444445566778899999999999999999999999999887665544433222 137999999999999999999
Q ss_pred EcCCCcceEEEEEEEe
Q psy7036 192 KNELGESNATISLNFD 207 (254)
Q Consensus 192 ~~~~~~~~~~~~~~v~ 207 (254)
.|..|.....+.|.|.
T Consensus 82 ~n~~g~~~~~~~l~V~ 97 (99)
T 3puc_A 82 KNSAGSVSSSCKLTIK 97 (99)
T ss_dssp EETTEEEEEEEEEEEE
T ss_pred EeCCCcEeEEEEEEEE
Confidence 9999998888888775
No 343
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.64 E-value=4e-15 Score=94.08 Aligned_cols=95 Identities=28% Similarity=0.466 Sum_probs=76.4
Q ss_pred CCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccC-CcceEEEcCCCCceeeEEEEccCCCCCceeEEE
Q psy7036 111 LAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKED-KRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKV 189 (254)
Q Consensus 111 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C 189 (254)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... ....+....++. ..|.|.+++.+|.|.|+|
T Consensus 7 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~---~~L~i~~v~~~D~G~Y~C 83 (110)
T 2dm2_A 7 GAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGT---CSLHTTASTLDDDGNYTI 83 (110)
T ss_dssp CCCCBSSCCCCEEEETTCCEEEEEEBCCSSCCEEEEECSSCBCCTTCSSEEEEECTTCE---EEEEESSCCTTTCSCCEE
T ss_pred CCCEEEecCcCeEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCeEEEEECCCcE---EEEEECCCChhhCEEEEE
Confidence 4666666677788899999999999999999999999999888653 333333322332 379999999999999999
Q ss_pred EEEcCCCcceEEEEEEEec
Q psy7036 190 TAKNELGESNATISLNFDS 208 (254)
Q Consensus 190 ~~~~~~~~~~~~~~~~v~~ 208 (254)
.|.|..|.....+.|.|..
T Consensus 84 ~a~N~~g~~~~~~~l~V~~ 102 (110)
T 2dm2_A 84 MAANPQGRISCTGRLMVQA 102 (110)
T ss_dssp EEECTTCCEEECCCEEEEC
T ss_pred EEEECCCeEEEEEEEEEEC
Confidence 9999999988888888875
No 344
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.64 E-value=4.2e-15 Score=99.81 Aligned_cols=95 Identities=31% Similarity=0.545 Sum_probs=77.4
Q ss_pred CCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEE
Q psy7036 111 LAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVT 190 (254)
Q Consensus 111 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~ 190 (254)
.+|.+...+....+..|+.+.|.|.+.+.|.+.+.|+|++..+.......+....++. ..|.|.+++.+|.|.|+|.
T Consensus 40 ~~P~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~~~~~~~~~~~~~---~~L~I~~v~~~D~G~Y~C~ 116 (154)
T 1fhg_A 40 VKPYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDEEGN---CSLTISEVCGDDDAKYTCK 116 (154)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEECTTCE---EEEEESSCCGGGCEEEEEE
T ss_pred CCCeEEccCCcEEEeCCCeEEEEEEEEEecCCEEEEEECCEECCCCCcEEEEECCCCe---EEEEECCCChhcCEEEEEE
Confidence 3455555556678889999999999999999999999999988766555444333332 4899999999999999999
Q ss_pred EEcCCCcceEEEEEEEec
Q psy7036 191 AKNELGESNATISLNFDS 208 (254)
Q Consensus 191 ~~~~~~~~~~~~~~~v~~ 208 (254)
|.|..|.....+.|.|..
T Consensus 117 a~N~~G~~~~~~~l~V~~ 134 (154)
T 1fhg_A 117 AVNSLGEATCTAELLVET 134 (154)
T ss_dssp EEETTEEEEEEEEEEEEC
T ss_pred EEECCCeEEEEEEEEEeC
Confidence 999999988888888875
No 345
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.63 E-value=3.4e-15 Score=106.51 Aligned_cols=124 Identities=19% Similarity=0.328 Sum_probs=82.7
Q ss_pred CCeeeecCCCeEEEEEEEeeCCC-----CeEEEEECCEecccCC-------------cceEEEcCCC-CceeeEEEEccC
Q psy7036 119 PSIRQEDDGKRLLFECRIQADPA-----PTVIWSHSGVQVKEDK-------------RHKFSIDKDG-HSYFASLEIIDV 179 (254)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~-----~~~~W~~~~~~~~~~~-------------~~~~~~~~~~-~~~~~~l~i~~~ 179 (254)
...+.+..|+.+.|.|.+.+.|. ..+.|++++..+.... ..+.....++ ......|.|.++
T Consensus 8 ~~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v 87 (222)
T 3sbw_C 8 KDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDV 87 (222)
T ss_dssp CSEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESSC
T ss_pred CccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcCc
Confidence 34567788999999999877663 4799999764331100 0111111110 011247999999
Q ss_pred CCCCceeEEEEEEcCCCcceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEeccCCCceeC
Q psy7036 180 TIEDAGKYKVTAKNELGESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEPEPTISW 254 (254)
Q Consensus 180 ~~~d~G~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p~p~~~W 254 (254)
+.+|+|.|+|.+.| .+.....+.|.|.... ..|... ....+.+|+ .+.|.|.+.|+|.|.++|
T Consensus 88 ~~~D~G~Y~C~~~~-~~~~~~~~~l~V~~~~-------~~~~~~---~~~~~~~g~-~v~L~C~~~g~P~p~i~W 150 (222)
T 3sbw_C 88 KLQDAGVYRCMISY-GGADYKRITVKVNAPY-------NKINQR---ILVVDPVTS-EHELTCQAEGYPKAEVIW 150 (222)
T ss_dssp CGGGCEEEEEEEES-SSEEEEEEEEEEEBCC-------CCCEEE---EEEEETTTT-EEEEEEEEEEBSCCEEEE
T ss_pred ccccCeEEEEEEEe-CCCceeEEEEEEECCC-------CCCCce---eeeeecCCC-cEEEEEEecCCCCCeEEE
Confidence 99999999999999 5666667777776411 122221 112456788 999999999999999999
No 346
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.63 E-value=5e-16 Score=108.94 Aligned_cols=126 Identities=16% Similarity=0.237 Sum_probs=87.4
Q ss_pred CCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEE
Q psy7036 112 APTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTA 191 (254)
Q Consensus 112 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~ 191 (254)
+|.+...+. ..+.+|+.++|.|.+.+.+. .+.|+|++..+............+ ..|.|.+++.+|+|.|+|.+
T Consensus 5 ~P~i~~~p~-~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~-----~~L~i~~v~~~D~G~Y~C~a 77 (198)
T 1ugn_A 5 KPTLWAEPG-SVITQGSPVTLRCQGGQETQ-EYRLYREKKTAPWITRIPQELVKK-----GQFPIPSITWEHTGRYRCYY 77 (198)
T ss_dssp CCEEEEESC-SEEETTCCEEEEEECCTTCC-CEEEEESSSCCHHHHTSCHHHHTT-----TEEEESSCCGGGCEEEEEEE
T ss_pred CCeEeccCC-CcccCCCcEEEEEEecCCCc-EEEEEECCccccccccccccCCcc-----cEEEECCCCHHHCeEEEEEE
Confidence 344444444 36779999999999987765 799999987764211110001112 27999999999999999999
Q ss_pred EcCC-C--cceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEeccCCCceeC
Q psy7036 192 KNEL-G--ESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEPEPTISW 254 (254)
Q Consensus 192 ~~~~-~--~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p~p~~~W 254 (254)
.|.. + .....+.|.|... ...|.+...+. ..+.+|+ .+.|.|.+.+. .|.+.|
T Consensus 78 ~n~~~g~~~~s~~~~l~V~~~-------~~~p~i~~~~~-~~v~~G~-~v~L~C~~~~~-~~~v~W 133 (198)
T 1ugn_A 78 GSDTAGRSESSDPLELVVTGA-------YIKPTLSAQPS-PVVNSGG-NVTLQCDSQVA-FDGFIL 133 (198)
T ss_dssp EETTTEECCCCCCEEEEEECS-------SCCCEEEEESC-SEEETTC-CEEEEEECSSC-CSEEEE
T ss_pred ECCCCCcccCCccEEEEEccc-------ccCCccccCCc-cccCCCC-cEEEEEecCCC-CcEEEE
Confidence 9987 5 3345566766641 12455555443 4677899 99999999988 678887
No 347
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.63 E-value=1.1e-15 Score=95.41 Aligned_cols=90 Identities=18% Similarity=0.246 Sum_probs=71.8
Q ss_pred CCCeeEeCCCceeecCCCeEEEEEEEeeCCC-CceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEE
Q psy7036 7 FAPSFTQKPQLRQEDEGNRLIFECQLLCNPK-PDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYK 85 (254)
Q Consensus 7 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~-~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 85 (254)
.+|.|...+....+.+|++++|.|.+.+.+. +.+.|||+|..+....++.+... + ....|.|.+++.+|+|.|+
T Consensus 7 ~p~~~~~~~~~~~v~~G~~v~l~C~v~~~~~~~~v~W~k~g~~i~~~~r~~~~~~--~---~~~~L~I~~v~~~D~G~Y~ 81 (104)
T 2eny_A 7 GHVGITKRLKTMEVLEGESCSFECVLSHESASDPAMWTVGGKTVGSSSRFQATRQ--G---RKYILVVREAAPSDAGEVV 81 (104)
T ss_dssp CCCCCSBCCCCEEEESSCCEEEEEECSSCCCSSCBCCBSSSSBCSBCSSCEEEEE--T---TEEEEEECSCCTTTCSCEE
T ss_pred CCCEEEecCCCcEEcCCCcEEEEEEEcCCCCCceeEEEECCEECCCCCCEEEEEc--C---CEEEEEECCCCHHHCEEEE
Confidence 3567888999999999999999999987764 47999999999877766655432 1 1337999999999999999
Q ss_pred EEEEcCCCceEEEEEEEEec
Q psy7036 86 VKAKNKMGEVAASINLNFSR 105 (254)
Q Consensus 86 C~~~~~~~~~~~~~~l~v~~ 105 (254)
|.+.| ...++.|.|..
T Consensus 82 C~a~~----~~~~a~L~V~~ 97 (104)
T 2eny_A 82 FSVRG----LTSKASLIVRE 97 (104)
T ss_dssp EEETT----EEEEECEEEEC
T ss_pred EEECC----eeEEEEEEEeC
Confidence 98854 45677778763
No 348
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.63 E-value=8.2e-15 Score=122.25 Aligned_cols=166 Identities=16% Similarity=0.210 Sum_probs=109.2
Q ss_pred CCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccC-CCCCeEEEEEEEcCCCceEEEEE
Q psy7036 22 EGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVI-ETDAGLYKVKAKNKMGEVAASIN 100 (254)
Q Consensus 22 ~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~-~~d~G~Y~C~~~~~~~~~~~~~~ 100 (254)
.+..+.|.|.+.|.|.+.+.|.++|..+..-... .+.|..+. ....+.|.|.+.+..|..... .
T Consensus 90 ~~g~l~v~c~~~g~P~p~i~W~k~g~~~~~~~~~--------------~~~i~~~~~~~~~l~~~~va~~~~G~~~~~-~ 154 (731)
T 2v5y_A 90 PPGLLNVYVKVNNGPLGNPIWNISGDPTRTWNRA--------------ELAISTFWPNFYQVIFEVITSGHQGYLAID-E 154 (731)
T ss_dssp CSEEEEEEEEETTCCCCSEEEEECCCCCSSCEEE--------------EEEECCCTTSCEEEEEEEEECSSCCEEEEC-C
T ss_pred CcceEEEEEecCCCCccceeEEEeCCcCCceeEE--------------EEEEeecCCCceEEEEEEEecCCceEEEEe-e
Confidence 3458999999999999999999999765321111 34444332 222367777666665543221 1
Q ss_pred EEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEE-EE--ECCEecccCCcceEEEcCCCCceeeEEEEc
Q psy7036 101 LNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVI-WS--HSGVQVKEDKRHKFSIDKDGHSYFASLEII 177 (254)
Q Consensus 101 l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~-W~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~ 177 (254)
+.+..... ..+|.+. .+....+..|+.+.|.|.+.|.|.+.+. |+ +++..+..... ... ......+.|.|.
T Consensus 155 v~~~~~~~-~~~p~~~-~~~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~~~~--~~~--~~~~~~~~l~I~ 228 (731)
T 2v5y_A 155 VKVLGHPC-TRTPHFL-RIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEI--KVT--SSRRFIASFNVV 228 (731)
T ss_dssp BEEESSCC-SSSCEEC-CCCCEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEEEEEE--EEC--CSSEEEEEEEEC
T ss_pred EEeeeccc-ccccccc-cccceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCccccccce--EEe--ccccceEEEEEc
Confidence 22221111 1345554 4456788899999999999999999887 88 67766542211 111 111223589999
Q ss_pred cCCCCCceeEEEEEEcCCCc-ceEEEEEEEec
Q psy7036 178 DVTIEDAGKYKVTAKNELGE-SNATISLNFDS 208 (254)
Q Consensus 178 ~~~~~d~G~y~C~~~~~~~~-~~~~~~~~v~~ 208 (254)
++...|.|.|+|.|.|..|. ......+.|..
T Consensus 229 ~~~~~d~g~Y~c~A~n~~G~~~s~~~~l~V~~ 260 (731)
T 2v5y_A 229 NTTKRDAGKYRCMIRTEGGVGISNYAELVVKE 260 (731)
T ss_dssp SCCTTTCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred ccccccCeEEEEEEECCCCCcceeeEEEEEec
Confidence 99999999999999999997 56666677764
No 349
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.63 E-value=1.5e-15 Score=96.85 Aligned_cols=93 Identities=19% Similarity=0.264 Sum_probs=72.9
Q ss_pred CCCC-CeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeE
Q psy7036 5 EDFA-PSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGL 83 (254)
Q Consensus 5 ~~~~-p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 83 (254)
+..+ +.|...+....+.+|++++|.|.+.+.|.+.+.|+|++..+....++.+... .+ ....|.|.+++.+|+|.
T Consensus 9 V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~-~~---~~~~L~I~~v~~~D~G~ 84 (115)
T 2cr6_A 9 VQGRRVHIIEDLEDVDVQEGSSATFRCRISPANYEPVHWFLDKTPLHANELNEIDAQ-PG---GYHVLTLRQLALKDSGT 84 (115)
T ss_dssp CCSSCCEEEECCCEEEEETTSCEECCCEEESTTCCSCEEEESSCEECCSSSCCBCCB-TT---TBCCBEECSCCTTTCEE
T ss_pred EcCCCCeEeccCccEEEeCCCcEEEEEEEcCCCCCccEEEECCEECCCCCcEEEEEc-CC---CEEEEEEcCCChhhCEE
Confidence 3444 4788899999999999999999999999999999999998877665544211 11 12269999999999999
Q ss_pred EEEEEEcCCCceEEEEEEEEec
Q psy7036 84 YKVKAKNKMGEVAASINLNFSR 105 (254)
Q Consensus 84 Y~C~~~~~~~~~~~~~~l~v~~ 105 (254)
|+|.+ |.....+.|.|..
T Consensus 85 Y~C~~----g~~~~~~~L~V~~ 102 (115)
T 2cr6_A 85 IYFEA----GDQRASAALRVTE 102 (115)
T ss_dssp EEEEE----TTEECCEEEEEEC
T ss_pred EEEEE----CCeeEEEEEEEEC
Confidence 99993 4556677888873
No 350
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.63 E-value=2.9e-15 Score=103.78 Aligned_cols=117 Identities=15% Similarity=0.138 Sum_probs=84.1
Q ss_pred CCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEE
Q psy7036 112 APTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTA 191 (254)
Q Consensus 112 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~ 191 (254)
+|.+...+.. .+.+|+.++|.|.+.+ +.+.+.|+|++... ...+. .|.|.+++.+|+|.|+|.+
T Consensus 8 ~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~~---------~~~~~-----~L~i~~v~~~D~G~Y~C~a 71 (184)
T 2gi7_A 8 KPSLQALPSS-LVPLEKPVTLRCQGPP-GVDLYRLEKLSSSR---------YQDQA-----VLFIPAMKRSLAGRYRCSY 71 (184)
T ss_dssp CCEEEEESCS-EEETTCCEEEEEECST-TCSEEEEEETTTCC---------EESSS-----EEEESSCCGGGCEEEEEEE
T ss_pred CCeEEeCCCc-cccCCCcEEEEEeCCC-CCCEEEEEECCccc---------cCccc-----EEEECcCChhhCceEEEEE
Confidence 4444444443 6789999999999876 77899999987651 11122 7999999999999999999
Q ss_pred EcCCCc--ceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEeccCCCceeC
Q psy7036 192 KNELGE--SNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEPEPTISW 254 (254)
Q Consensus 192 ~~~~~~--~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p~p~~~W 254 (254)
.|..+. .+..+.|.|... ..+|.+...+ ...+.+|+ .+.|.|.+.+.| +.+.|
T Consensus 72 ~n~~g~~~~s~~~~l~V~~~-------~~~p~i~~~p-~~~v~~G~-~v~l~C~~~~~~-~~~~w 126 (184)
T 2gi7_A 72 QNGSLWSLPSDQLELVATGV-------FAKPSLSAQP-GPAVSSGG-DVTLQCQTRYGF-DQFAL 126 (184)
T ss_dssp EETTEEBCCCCCEEEEEESS-------SCCCEEEEEC-CCSSCCTT-CEEEEEECSSCC-CEEEE
T ss_pred EcCCCccCCCCCEEEEecCc-------CCCCEEEeCC-CceecCCC-cEEEEEEcCCCC-cEEEE
Confidence 998763 244566666431 1256666656 34677898 999999987655 57777
No 351
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.63 E-value=4.3e-15 Score=104.44 Aligned_cols=114 Identities=15% Similarity=0.191 Sum_probs=81.5
Q ss_pred eeecCCCeEEEEEEEeeCCCCeEEEEECC-EecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceE
Q psy7036 122 RQEDDGKRLLFECRIQADPAPTVIWSHSG-VQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNA 200 (254)
Q Consensus 122 ~~~~~g~~~~l~C~~~~~~~~~~~W~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~ 200 (254)
..+.+|+.+.|.|.+.|.|.+.+.|++.. ..+. . ....... ...|.|.+++.+|+|.|+|.|.|..+....
T Consensus 11 ~~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~~--~--~~~~~~~----~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~ 82 (202)
T 1vca_A 11 YLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPLN--G--KVTNEGT----TSTLTMNPVSFGNEHSYLCTATCESRKLEK 82 (202)
T ss_dssp EEEETTSCEEEEEEEESCSSCEEEEEETTCCCCS--S--EEEEETT----EEEEEESSCCGGGCSEEEEEEEETTEEEEE
T ss_pred EEEcCCCcEEEEEeecCCCCCeEEEECCCCCCcc--c--eEEEcCC----ccEEEECcCCHHHCEEEEEEEEECCceEee
Confidence 34558999999999999999999999843 1111 1 1111111 126999999999999999999999887777
Q ss_pred EEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEeccCC---CceeC
Q psy7036 201 TISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEPE---PTISW 254 (254)
Q Consensus 201 ~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p~---p~~~W 254 (254)
.+.|.|...+ ..+.+. +. ..+.+|+ .++|.|.+.+.++ +.++|
T Consensus 83 ~~~l~V~~~p-------~~~~~~--~~-~~~~~G~-~~~L~C~~~~~~p~~~~~i~W 128 (202)
T 1vca_A 83 GIQVEIYSFP-------KDPEIH--LS-GPLEAGK-PITVKCSVADVYPFDRLEIDL 128 (202)
T ss_dssp EEEEEEEBCC-------SCCEEE--ES-SCEETTS-CEEEEEEEEEEBSGGGEEEEE
T ss_pred EEEEEEEeCC-------CCCEeC--Cc-eEEcCCC-CEEEEEEECCcCCCCCeEEEE
Confidence 8888887521 122333 22 4678899 9999999998644 35788
No 352
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.63 E-value=1.3e-14 Score=92.57 Aligned_cols=83 Identities=19% Similarity=0.314 Sum_probs=67.2
Q ss_pred CCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcC---CCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEE
Q psy7036 126 DGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDK---DGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATI 202 (254)
Q Consensus 126 ~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~ 202 (254)
.+..+.|.|.+.|.|.|.+.|+|||..+............ +.......|.|.++...|+|.|+|.|.|..|....++
T Consensus 14 ~~~~~~l~c~v~G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~~t~ 93 (126)
T 1he7_A 14 EMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASI 93 (126)
T ss_dssp CCCEEEEEEEECCSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred cCccEEEEEEEeeeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeEEEEE
Confidence 5778999999999999999999999999876554333322 1222345899999999999999999999999988888
Q ss_pred EEEEec
Q psy7036 203 SLNFDS 208 (254)
Q Consensus 203 ~~~v~~ 208 (254)
.+.|..
T Consensus 94 ~l~v~~ 99 (126)
T 1he7_A 94 MAAFMD 99 (126)
T ss_dssp EECCCS
T ss_pred EEEEEc
Confidence 777764
No 353
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.63 E-value=9.9e-15 Score=92.73 Aligned_cols=93 Identities=17% Similarity=0.292 Sum_probs=71.2
Q ss_pred CCCCCCCeeEeCCCc---eeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCC
Q psy7036 3 IAEDFAPSFTQKPQL---RQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIET 79 (254)
Q Consensus 3 ~~~~~~p~~~~~~~~---~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 79 (254)
..+..+|.+...|.. ..+.+|+++.|.|.+. .|.+.+.|+|++..+....++.+... + ....|.|.+++.+
T Consensus 5 ~~v~~pp~~~~~p~~~~~~~~~~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~~~~~~~~~--~---~~~~L~I~~v~~~ 78 (113)
T 2cpc_A 5 SSGTDVSSWIVYPSGKVYVAAVRLERVVLTCELC-RPWAEVRWTKDGEEVVESPALLLQKE--D---TVRRLVLPAVQLE 78 (113)
T ss_dssp CCCCSCSCSEEESCSCEEEEEETTCCEEEEEEES-CTTCCCEEEETTEECCCBTTBEEEEC--S---SEEEEEESSCCTT
T ss_pred cccccCCcEEEccCCceeEEEEcCCeEEEEEEec-CCCCeEEEEECCEECccCCCEEEEEC--C---CEEEEEECCCCcc
Confidence 344556766666655 5788999999999996 78889999999999877666554322 1 1237999999999
Q ss_pred CCeEEEEEEEcCCCceEEEEEEEEec
Q psy7036 80 DAGLYKVKAKNKMGEVAASINLNFSR 105 (254)
Q Consensus 80 d~G~Y~C~~~~~~~~~~~~~~l~v~~ 105 (254)
|+|.|+|.+.| ....+.|.|..
T Consensus 79 D~G~Y~C~a~n----~~~~~~l~V~~ 100 (113)
T 2cpc_A 79 DSGEYLCEIDD----ESASFTVTVTE 100 (113)
T ss_dssp TCEEEEEESSS----CEEEEEEEEEC
T ss_pred cCEEEEEEEec----CcEEEEEEEec
Confidence 99999999987 45567777763
No 354
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.63 E-value=2.5e-15 Score=103.27 Aligned_cols=115 Identities=13% Similarity=0.238 Sum_probs=84.2
Q ss_pred CCccccCCCeeeecCCCeEEEEEEEeeCCCCe-EEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEE
Q psy7036 112 APTFLKKPSIRQEDDGKRLLFECRIQADPAPT-VIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVT 190 (254)
Q Consensus 112 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~-~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~ 190 (254)
+|.+...+....+.+|+.+.|.|.+.+.+.+. +.|++++..+... + ..|.|.+++.+|+|.|+|.
T Consensus 7 ~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~~~---------~-----~~L~i~~~~~~d~G~Y~C~ 72 (175)
T 1fnl_A 7 KAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQ---------A-----SSYFIDAATVNDSGEYRCQ 72 (175)
T ss_dssp CCEEEEESCCSEEETTCCEEEEEECCCBTTBCCCEEEETTEEEESS---------C-----SEEEESSCCGGGCEEEEEE
T ss_pred CCEEEEcCCceeeeCCCcEEEEeeCCCCCCCcceEEEECCEEccCC---------c-----eEEEEeCCCcccCEEEEEE
Confidence 34444455555788999999999998887665 8899999876531 1 2799999999999999999
Q ss_pred EEcCCCcceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEeccCCC-ceeC
Q psy7036 191 AKNELGESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEPEP-TISW 254 (254)
Q Consensus 191 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p~p-~~~W 254 (254)
+.|..+. ..+.+.|.. ++.+...+. ..+.+|+ .+.|.|.+.+.|++ .+.|
T Consensus 73 ~~n~~~s--~~~~l~V~~----------~~~~~~~~~-~~~~~g~-~~~l~C~~~~~~~~~~~~W 123 (175)
T 1fnl_A 73 TNLSTLS--DPVQLEVHI----------GWLLLQAPR-WVFKEED-PIHLRCHSWKNTALHKVTY 123 (175)
T ss_dssp CSSSCCC--CCEEEEEEC----------SSEEEECSC-SEEETTC-CEEEEEEECTTCCCEEEEE
T ss_pred eeCCccc--ccEEEEEeC----------CCceeeCCC-ceecCCC-CEEEEEEcCCCCCceEEEE
Confidence 9885553 344555552 223333333 4567888 99999999988665 8888
No 355
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.63 E-value=5e-15 Score=91.92 Aligned_cols=92 Identities=24% Similarity=0.491 Sum_probs=74.6
Q ss_pred CCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEE
Q psy7036 111 LAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVT 190 (254)
Q Consensus 111 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~ 190 (254)
.+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+..... ++....++ .|.|.+++.+|.|.|+|.
T Consensus 7 ~~P~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~-~~~~~~~~-----~L~i~~v~~~d~G~Y~C~ 80 (100)
T 2edj_A 7 GPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDP-RATIQEQG-----TLQIKNLRISDTGTYTCV 80 (100)
T ss_dssp SSCEEEECCCCEEEESSSEEEECCEEECSSCCEEEEEESSSEESSSCS-SCEECTTC-----CEEEESCCTTTCCEEEEE
T ss_pred CCCEEEeCcCCEEEcCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCC-CEEEcCCC-----EEEEccCCcccCEEEEEE
Confidence 456666666777888999999999999999999999999988763332 22333333 699999999999999999
Q ss_pred EEcCCCcceEEEEEEEec
Q psy7036 191 AKNELGESNATISLNFDS 208 (254)
Q Consensus 191 ~~~~~~~~~~~~~~~v~~ 208 (254)
+.|..|.....+.|.|..
T Consensus 81 a~n~~g~~~~~~~l~V~~ 98 (100)
T 2edj_A 81 ATSSSGETSWSAVLDVTE 98 (100)
T ss_dssp EECSSCCCBCCEEEEEES
T ss_pred EEcCCCCEEEEEEEEEec
Confidence 999999888888888763
No 356
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.63 E-value=2e-15 Score=106.95 Aligned_cols=124 Identities=20% Similarity=0.323 Sum_probs=87.1
Q ss_pred CeeeecCCCeEEEEEEEeeCC----CCeEEEEEC----------------CEeccc---CCcceEEEcC-CCCceeeEEE
Q psy7036 120 SIRQEDDGKRLLFECRIQADP----APTVIWSHS----------------GVQVKE---DKRHKFSIDK-DGHSYFASLE 175 (254)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~~~----~~~~~W~~~----------------~~~~~~---~~~~~~~~~~-~~~~~~~~l~ 175 (254)
..+.+.+|+.+.|.|.+.+.+ .+.+.|+++ +..+.. ....+..... +.......|.
T Consensus 8 ~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~ 87 (214)
T 3jz7_A 8 QRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASIN 87 (214)
T ss_dssp EEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCCEE
T ss_pred ceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcccEE
Confidence 456778999999999998876 468999983 332221 0111222221 0011123799
Q ss_pred EccCCCCCceeEEEEEEcCCCcceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEE-eccCCCceeC
Q psy7036 176 IIDVTIEDAGKYKVTAKNELGESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRL-VGEPEPTISW 254 (254)
Q Consensus 176 i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~-~~~p~p~~~W 254 (254)
|.+++.+|+|.|+|.+.|..+.....+.|.|.. +|.+...+....+.+|+ .+.|.|.+ .|.|.|.+.|
T Consensus 88 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~----------~p~~~~~~~~~~~~~g~-~v~l~C~~~~g~p~~~v~W 156 (214)
T 3jz7_A 88 VTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLV----------KPSGTRCFVDGSEEIGN-DFKLKCEPKEGSLPLQFEW 156 (214)
T ss_dssp ECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC----------CCBSCEEEEESCCBTTC-CEEEEEECSBCCSSCEEEE
T ss_pred EccCChhhCeEEEEEEEeCCCccccEEEEEEEc----------CCCCceeeeecceecCC-cEEEEecCCCCCCCCEEEE
Confidence 999999999999999999988778888888875 23333333333467888 99999999 8999999998
No 357
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.62 E-value=2.2e-15 Score=94.94 Aligned_cols=92 Identities=23% Similarity=0.379 Sum_probs=67.0
Q ss_pred CCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEE
Q psy7036 111 LAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVT 190 (254)
Q Consensus 111 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~ 190 (254)
.+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+.......+ ...+. .|.|.+++.+|+|.|+|.
T Consensus 9 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~-~~~~~-----~L~i~~v~~~D~G~Y~C~ 82 (108)
T 3kvq_A 9 VAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVL-KDGNR-----NLTIRRVRKEDEGLYTCQ 82 (108)
T ss_dssp --CCCBSCCCCEEEETTCCEEEECBCC----CCEEEEESSSBCCCBTTEEE-ETTTT-----EEEECSCCGGGCEEEEEE
T ss_pred CCCceecCCCCeEEeCCCeEEEEEECcCcCCCeEEEEECCeEcccCCCeEE-eCCCc-----EEEEeecCcccCEEEEEE
Confidence 466666667778889999999999999999999999999988765544332 22222 799999999999999999
Q ss_pred EEcCCCcceEEEEEEEec
Q psy7036 191 AKNELGESNATISLNFDS 208 (254)
Q Consensus 191 ~~~~~~~~~~~~~~~v~~ 208 (254)
+.|..|.....+.|.|..
T Consensus 83 a~n~~g~~~~~~~l~V~~ 100 (108)
T 3kvq_A 83 ACSVLGCAKVEAFFIIEG 100 (108)
T ss_dssp EC----CEEEEEEEEEEC
T ss_pred EEeCCCceEEEEEEEEeC
Confidence 999999998888888875
No 358
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=99.62 E-value=6.5e-15 Score=93.33 Aligned_cols=99 Identities=18% Similarity=0.309 Sum_probs=72.4
Q ss_pred CCCCCeeEeCCCceeecCCCeEEEEEEEeeC--CCCceEEEeCCEEeeeCCcceEEEeecC---CcceEEEEEEeccCCC
Q psy7036 5 EDFAPSFTQKPQLRQEDEGNRLIFECQLLCN--PKPDIVWFRGETQLSEDTRTVMKTTPIG---TNKYLVALELDDVIET 79 (254)
Q Consensus 5 ~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~--~~~~v~W~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~i~~~~~~ 79 (254)
...+|.|...|....+.+|++++|.|.+.+. +.+.+.|+|++..+.............. .......|.|.+++..
T Consensus 7 ~~~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 86 (112)
T 3so5_A 7 DFPXPQITVQPETQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEFT 86 (112)
T ss_dssp -CCSCEEEECCCCEEECTTCCEEEEEEEEESCCCCCEEEEEETTEECTTCEEEEEEETTGGGSSCEEEEEEEEECSCCGG
T ss_pred CCCCCeEEeCCCCcEEECCCCEEEEEEEecCCCCCEEEEEccCCcccccccccceeeeeccCCCccccceEEEEeccccc
Confidence 4568899999999999999999999999864 4578999999988754321111111000 1112358999999999
Q ss_pred CCeEEEEEEEcCCCc-eEEEEEEEE
Q psy7036 80 DAGLYKVKAKNKMGE-VAASINLNF 103 (254)
Q Consensus 80 d~G~Y~C~~~~~~~~-~~~~~~l~v 103 (254)
|+|.|+|.+.|..|. ....+.|.|
T Consensus 87 D~G~Y~C~a~n~~g~~~s~~~~l~V 111 (112)
T 3so5_A 87 SEGXYQCVISNHFGSSYSVXAXLTI 111 (112)
T ss_dssp GCEEEEEEEEETTEEEECCCEEEEE
T ss_pred cCCeEEEEEEeCCCcEEEeEEEEEe
Confidence 999999999999887 345666655
No 359
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.62 E-value=1.3e-14 Score=92.18 Aligned_cols=88 Identities=22% Similarity=0.440 Sum_probs=71.2
Q ss_pred CCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEE
Q psy7036 7 FAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKV 86 (254)
Q Consensus 7 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 86 (254)
.+|.|...+....+.+|+++.|.|.+.+. +.+.|||++..+....++.+... + ....|.|.+++.+|+|.|+|
T Consensus 18 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~l~~~~~~~~~~~--~---~~~~L~I~~v~~~D~G~Y~C 90 (113)
T 2edh_A 18 LPIKFTEGLRNEEATEGATAVLRCELSKM--APVEWWKGHETLRDGDRHSLRQD--G---ARCELQIRGLVAEDAGEYLC 90 (113)
T ss_dssp SCCCEEECCCCCEECTTSCEEEEEEESSC--CCCEEEESSSBCCCSSSEEEEEE--T---TEEEEEECSCCSTTCEEEEE
T ss_pred CCCcccccCCceEEeCCCeEEEEEEECCC--CcEEEEECCEECCCCCcEEEEEC--C---CEEEEEECCCChhhCEEEEE
Confidence 45689889999999999999999999764 78999999998877666555432 1 23479999999999999999
Q ss_pred EEEcCCCceEEEEEEEEec
Q psy7036 87 KAKNKMGEVAASINLNFSR 105 (254)
Q Consensus 87 ~~~~~~~~~~~~~~l~v~~ 105 (254)
.+ +.....+.|.|..
T Consensus 91 ~a----~~~~~~~~l~V~~ 105 (113)
T 2edh_A 91 MC----GKERTSAMLTVRA 105 (113)
T ss_dssp EE----TTEEEEEEEEECC
T ss_pred Ee----CCCCEEEEEEEeC
Confidence 99 5567778888863
No 360
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.62 E-value=4.3e-16 Score=96.98 Aligned_cols=89 Identities=18% Similarity=0.251 Sum_probs=70.0
Q ss_pred CCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCC----cceEEEeecCCcceEEEEEEeccCCCCC
Q psy7036 6 DFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDT----RTVMKTTPIGTNKYLVALELDDVIETDA 81 (254)
Q Consensus 6 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 81 (254)
..+|.|...+....+.+|++++|.|.+.+.+ +.+.|+|++..+.... ++.+. ..+ ....|.|.+++..|+
T Consensus 6 ~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~-~~v~W~k~g~~i~~~~~~~~~~~~~--~~~---~~~~L~I~~~~~~D~ 79 (101)
T 2edk_A 6 SGPVLIVTPLEDQQVFVGDRVEMAVEVSEEG-AQVMWMKNGVELTREDSFKARYRFK--KDG---KRHILIFSDVVQEDR 79 (101)
T ss_dssp CCCCCEEECCCCEEEESSCCCBCCEEESCSS-CCCEEEESSCBCCCSCCSSCCCEEE--ECS---SEEEEECSSCCGGGC
T ss_pred cCCCEEEecCCceEEcCCCCEEEEEEEeCCC-CEEEEEECCEECCCCCCcceeEEEE--ECC---CEEEEEECCCChhhC
Confidence 3577899999999999999999999999888 8999999999887665 33333 222 234799999999999
Q ss_pred eEEEEEEEcCCCceEEEEEEEEe
Q psy7036 82 GLYKVKAKNKMGEVAASINLNFS 104 (254)
Q Consensus 82 G~Y~C~~~~~~~~~~~~~~l~v~ 104 (254)
|.|+|.+.| ....+.|.|.
T Consensus 80 G~Y~C~a~n----~~~~~~l~V~ 98 (101)
T 2edk_A 80 GRYQVITNG----GQCEAELIVE 98 (101)
T ss_dssp SBEEEECSS----CEECCBEEEE
T ss_pred EEEEEEEcC----CcEEEEEEEe
Confidence 999999986 3344556664
No 361
>3bn3_B ICAM-5, intercellular adhesion molecule 5, telencephalin; I domain, integrin, allosteric mobility, cell adhesi immune system; HET: NAG; 2.10A {Homo sapiens}
Probab=99.62 E-value=3.5e-14 Score=97.77 Aligned_cols=167 Identities=11% Similarity=0.123 Sum_probs=104.7
Q ss_pred eeEeCCCceeecCCCeEEEEEEEeeCCCC-ceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEEEE
Q psy7036 10 SFTQKPQLRQEDEGNRLIFECQLLCNPKP-DIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKVKA 88 (254)
Q Consensus 10 ~~~~~~~~~~v~~g~~v~l~C~~~~~~~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 88 (254)
.+.+.|+...|.+|+++.|+|.+.. +.+ .+.|.-.-.... .. .+ .....+.|.+++ +|.+.|.|.+
T Consensus 4 ~v~v~P~~~~V~~G~Sv~l~Cs~~c-~~p~~~~~~t~l~~~~------~~---~g--~~~~~~~ls~vs-~d~~~~~C~~ 70 (196)
T 3bn3_B 4 WADLQPRVAFVERGGSLWLNCSTNC-PRPERGGLETSLRRNG------TQ---RG--LRWLARQLVDIR-EPETQPVCFF 70 (196)
T ss_dssp CEEEESSEEEEETTEEEEEEEEECC-SSCSEEEEECSSEEEE------EE---EE--TTEEEEEEEEEC-SSEECCEEEE
T ss_pred EEEEcCCCcEEcCCCeEEEEEeCCC-CCCCccEEEEccCCee------Ec---cc--cCceEEEEEEEc-cCCCceEEEE
Confidence 3556778888999999999999963 444 577753211100 00 00 111148899998 8888899998
Q ss_pred EcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeC-CCCe--EEEEECCEecccCCcceEEEcC
Q psy7036 89 KNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQAD-PAPT--VIWSHSGVQVKEDKRHKFSIDK 165 (254)
Q Consensus 89 ~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~~--~~W~~~~~~~~~~~~~~~~~~~ 165 (254)
..........+.|.|.. .|...........+.+|+.++|.|.+.+. |... +.|+|++..+...... ....
T Consensus 71 ~c~~~~~~~~v~l~Vy~-----~P~~v~i~~~~~~~~~G~~~tL~C~v~~~~P~~~L~i~wlkg~~~l~~~~~~--~~~~ 143 (196)
T 3bn3_B 71 RCARRTLQARGLIRTFQ-----RPDRVELMPLPPWQPVGENFTLSCRVPGAGPRASLTLTLLRGAQELIRRSFA--GEPP 143 (196)
T ss_dssp EETTEEEEEECEEEEEB-----CCCCCEECCCCSSEETTSEEEEEEEETTCBCGGGEEEEEEETTEEEEEEECT--TSCT
T ss_pred ECCCCceEEEEEEEEec-----CCCcCEEccCCccccCCCcEEEEEEeCCccCCCCcEEEEEeCCEEeeccccc--cccc
Confidence 76555567788888863 22222233332236789999999999874 4433 8999999887532210 0001
Q ss_pred CCCceeeEEEEccCCCCCceeEEEEEEcCCC
Q psy7036 166 DGHSYFASLEIIDVTIEDAGKYKVTAKNELG 196 (254)
Q Consensus 166 ~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~ 196 (254)
+.....+.+.+...+.++...|+|.|.+..+
T Consensus 144 ~~~~~t~~~~~~~~r~D~g~~~sC~A~l~l~ 174 (196)
T 3bn3_B 144 RARGAVLTATVLARREDHGANFSCRAELDLR 174 (196)
T ss_dssp TCCCEEEEEEEECCGGGTTCEEEEEEEEECG
T ss_pred cccceeEEEEEeeeeccCCCeEEEEEEccCC
Confidence 1111224566665555555599999998776
No 362
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.62 E-value=9.1e-15 Score=104.14 Aligned_cols=128 Identities=20% Similarity=0.316 Sum_probs=83.6
Q ss_pred CeeeecCCCeEEEEEEEeeCC--CCeEEEEEC--CEecc------c---------CCcceEEEcCCCCceeeEEEEccCC
Q psy7036 120 SIRQEDDGKRLLFECRIQADP--APTVIWSHS--GVQVK------E---------DKRHKFSIDKDGHSYFASLEIIDVT 180 (254)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~~~--~~~~~W~~~--~~~~~------~---------~~~~~~~~~~~~~~~~~~l~i~~~~ 180 (254)
....+..|+.+.|.|.+.+.+ .+.+.|+|+ +..+. . ....++....+.......|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 87 (219)
T 1c1e_H 8 GPELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINNLK 87 (219)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECSCC
T ss_pred CCeEecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECCCC
Confidence 345678899999999998865 678999987 32221 0 0011222211111112489999999
Q ss_pred CCCceeEEEEEEcCCCc----ceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEec-cCCC-ceeC
Q psy7036 181 IEDAGKYKVTAKNELGE----SNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVG-EPEP-TISW 254 (254)
Q Consensus 181 ~~d~G~y~C~~~~~~~~----~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~-~p~p-~~~W 254 (254)
.+|+|.|+|.+.|..+. ......+.|.... ..+|.+...+....+.+|+ .+.|.|.+.| +|.| .++|
T Consensus 88 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~------~~~P~i~~~~~~~~~~~g~-~v~L~C~~~g~~P~p~~v~W 160 (219)
T 1c1e_H 88 NEDMATYFCARGTTIVRAMDYWGQGTSLTVSSAK------TTPPSVYPLAPGSAAQTNS-MVTLGCLVKGYFPEPVTVTW 160 (219)
T ss_dssp GGGCEEEEEEEEETTTTEEEEECCCEEEEECCCC------CBCCEEEEECCCSSSCCSS-EEEEEEEEEEEBSSCCEEEE
T ss_pred cccCEEEEEEEeccCcccceeecCceEEEEecCC------CCCCeEEEecCccccccCC-eEEEEEEcccccCCCeEEEE
Confidence 99999999999997632 1234456665311 1245554433333567788 9999999998 8998 8998
No 363
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.62 E-value=2.6e-14 Score=91.18 Aligned_cols=97 Identities=18% Similarity=0.336 Sum_probs=72.2
Q ss_pred CCccccCCCeeeecCCCeEEEEEEEeeC---CCCeEEEEECCEe-ccc--CCcceEE--EcCCCCceeeEEEEccCCCCC
Q psy7036 112 APTFLKKPSIRQEDDGKRLLFECRIQAD---PAPTVIWSHSGVQ-VKE--DKRHKFS--IDKDGHSYFASLEIIDVTIED 183 (254)
Q Consensus 112 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~---~~~~~~W~~~~~~-~~~--~~~~~~~--~~~~~~~~~~~l~i~~~~~~d 183 (254)
.+.+...+..+.+.+|+.++|.|.+.+. |.|.+.|+|+... +.. .....+. .......+...|.|.++...|
T Consensus 7 ~~~F~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 86 (126)
T 2dav_A 7 GILFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNF 86 (126)
T ss_dssp SCSCCSCCCCCEEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTS
T ss_pred ccEEEEcCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCccc
Confidence 3456667778889999999999999875 7899999997421 111 1222221 112222344689999999999
Q ss_pred ceeEEEEEEcCCCcceEEEEEEEec
Q psy7036 184 AGKYKVTAKNELGESNATISLNFDS 208 (254)
Q Consensus 184 ~G~y~C~~~~~~~~~~~~~~~~v~~ 208 (254)
+|.|+|.|.|..+....++.|.|..
T Consensus 87 aG~Y~Cevsn~~g~~~~~~~L~V~~ 111 (126)
T 2dav_A 87 AGNYRCEVTYKDKFDSCSFDLEVHE 111 (126)
T ss_dssp CEEEEEEEECSSCEEEECCEEEEEC
T ss_pred CEEEEEEEEeCCCcEEEEEEEEEEe
Confidence 9999999999999888888898886
No 364
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.62 E-value=1.1e-14 Score=104.14 Aligned_cols=122 Identities=24% Similarity=0.321 Sum_probs=82.4
Q ss_pred CeeeecCCCeEEEEEEEeeCCCC---eEEEEECCEec-----------ccC----CcceEEEcC-CCCceeeEEEEccCC
Q psy7036 120 SIRQEDDGKRLLFECRIQADPAP---TVIWSHSGVQV-----------KED----KRHKFSIDK-DGHSYFASLEIIDVT 180 (254)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~~~~~---~~~W~~~~~~~-----------~~~----~~~~~~~~~-~~~~~~~~l~i~~~~ 180 (254)
..+.+..|+++.|.|.+.+.+.+ .+.|+|++... ... ...+..... ........|.|.+++
T Consensus 12 ~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~ 91 (226)
T 4f80_A 12 GPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVT 91 (226)
T ss_dssp SCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSCC
T ss_pred CCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeCc
Confidence 34667889999999998876544 69999876321 110 001111111 111223589999999
Q ss_pred CCCceeEEEEEEcCCCcceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEec-cCCCceeC
Q psy7036 181 IEDAGKYKVTAKNELGESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVG-EPEPTISW 254 (254)
Q Consensus 181 ~~d~G~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~-~p~p~~~W 254 (254)
.+|+|.|+|.|.|..+.....+.+.+.. .....+....+.+|+ .+.|.|.+.| .|.|.++|
T Consensus 92 ~~D~G~Y~C~a~n~~~~~~~~v~~~~~~------------~~~~~~~~~~~~~g~-~v~l~c~~~g~~P~p~i~W 153 (226)
T 4f80_A 92 ASDSGKYLCYFQDGDFYEKALVELKVAA------------LGSDLHVDVKGYKDG-GIHLECRSTGWYPQPQIQW 153 (226)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEEEEB------------CCCCCEEEEEEEETT-EEEEEEEEEEEBSCCEEEE
T ss_pred hHHCeeEEEEEECCCcEEEEEEEEeecc------------ceecccceeeeccCC-ceeeEEEeccCCCCCEEEE
Confidence 9999999999999888777666655542 112223334566788 9999999988 59999999
No 365
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.62 E-value=2e-15 Score=103.80 Aligned_cols=112 Identities=21% Similarity=0.304 Sum_probs=79.6
Q ss_pred eeecCCCeEEEEEEEee--CCCCeEEEEECCEeccc--------CCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEE
Q psy7036 122 RQEDDGKRLLFECRIQA--DPAPTVIWSHSGVQVKE--------DKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTA 191 (254)
Q Consensus 122 ~~~~~g~~~~l~C~~~~--~~~~~~~W~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~ 191 (254)
+.+.+|+.+.|.|.... .+.+.+.|+|++..+.. ....++....++ .|.|.+++.+|+|.|+|.+
T Consensus 6 v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~g-----sL~I~~v~~~D~G~Y~C~~ 80 (176)
T 1hng_A 6 VWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANG-----DLKIKNLTRDDSGTYNVTV 80 (176)
T ss_dssp EEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTTS-----CEEESSCCGGGCEEEEEEE
T ss_pred EEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECCCC-----cEEEcccccccCEEEEEEE
Confidence 45678999999995333 45668999999875431 011223333343 6999999999999999999
Q ss_pred EcCCCcc--eEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEeccCCCceeC
Q psy7036 192 KNELGES--NATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEPEPTISW 254 (254)
Q Consensus 192 ~~~~~~~--~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p~p~~~W 254 (254)
.|..|.. ...+.|.|... ...|.+.. .+. .+.|.|.+.|.|.|.++|
T Consensus 81 ~n~~g~~~~~~~~~l~V~~~-------~~~p~i~~--------~~~-~v~L~C~~~g~p~p~i~W 129 (176)
T 1hng_A 81 YSTNGTRILNKALDLRILEM-------VSKPMIYW--------ECS-NATLTCEVLEGTDVELKL 129 (176)
T ss_dssp EETTCCEEEEEEEEEEEECC-------CCCCEEEE--------ETT-TTEEEEECSSCSSCEEEE
T ss_pred EeCCCCEEEEEEEEEEEeCC-------CCCCEEEe--------cCC-cEEEEEEecCCCCcEEEE
Confidence 9998886 66677777641 11333332 234 689999999999999999
No 366
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.62 E-value=3e-14 Score=88.77 Aligned_cols=84 Identities=24% Similarity=0.418 Sum_probs=66.9
Q ss_pred cCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEc-CCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEE
Q psy7036 125 DDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSID-KDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATIS 203 (254)
Q Consensus 125 ~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~ 203 (254)
..+..+.|.|.+.|.|.|.+.|+|++..+........... .+.....+.|.|.++..+|+|.|+|.|.|..|....++.
T Consensus 14 ~~~~~~~~~c~v~G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~~~ 93 (103)
T 1wwb_X 14 TSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQIS 93 (103)
T ss_dssp CCCCEEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEE
T ss_pred eECcEEEEEEEEEEeCCCEEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEEEEEEEeCCCcEeEEEE
Confidence 3578899999999999999999999999876643222221 122334457999999999999999999999999988888
Q ss_pred EEEec
Q psy7036 204 LNFDS 208 (254)
Q Consensus 204 ~~v~~ 208 (254)
|.|..
T Consensus 94 l~V~~ 98 (103)
T 1wwb_X 94 AHFMG 98 (103)
T ss_dssp ECCSC
T ss_pred EEECC
Confidence 87764
No 367
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.62 E-value=2.1e-14 Score=88.57 Aligned_cols=87 Identities=20% Similarity=0.373 Sum_probs=71.2
Q ss_pred CCCeeeecCCCeEEEEEEEeeC-CCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCC
Q psy7036 118 KPSIRQEDDGKRLLFECRIQAD-PAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELG 196 (254)
Q Consensus 118 ~~~~~~~~~g~~~~l~C~~~~~-~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~ 196 (254)
.+....+.+|+.+.|.|.+.+. |.+.+.|++++..+.......+..... .+.|.|.+++.+|.|.|+|.+.|..|
T Consensus 7 ~~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~~~~~~~~~~~~----~~~L~i~~v~~~D~G~Y~C~a~n~~g 82 (97)
T 2bk8_A 7 QIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENSEKYEITYEDG----VAILYVKDITKLDDGTYRCKVVNDYG 82 (97)
T ss_dssp CCCCEEECTTCCEEEEEEEESCCTTCEEEEEETTEECCSSSSEEEEEETT----EEEEEECSCCGGGCEEEEEEEECSSC
T ss_pred cCcCEEEcCCCcEEEEEEEeccCCCCEEEEEECCEECcCCCCEEEEEcCC----eEEEEEecCChhhCeEEEEEEECCCC
Confidence 3456778899999999999997 889999999999887665544433222 23799999999999999999999999
Q ss_pred cceEEEEEEEec
Q psy7036 197 ESNATISLNFDS 208 (254)
Q Consensus 197 ~~~~~~~~~v~~ 208 (254)
....++.|.|..
T Consensus 83 ~~~~~~~l~V~~ 94 (97)
T 2bk8_A 83 EDSSYAELFVKG 94 (97)
T ss_dssp EEEEEEEEEETT
T ss_pred eEeEEEEEEEEe
Confidence 988888888763
No 368
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.62 E-value=5.1e-15 Score=92.37 Aligned_cols=90 Identities=14% Similarity=0.330 Sum_probs=68.6
Q ss_pred CCCCCeeEeCCCc-eeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeC-CcceEEEeecCCcceEEEEEEeccCCCCCe
Q psy7036 5 EDFAPSFTQKPQL-RQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSED-TRTVMKTTPIGTNKYLVALELDDVIETDAG 82 (254)
Q Consensus 5 ~~~~p~~~~~~~~-~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G 82 (254)
...+|.|+..+.. ..+.+|++++|.|.+ +.|.+.+.|+|+|..+... .++.+... +. ...|.|.+++.+|+|
T Consensus 12 ~~~~p~f~~~~~~~~~v~~G~~v~L~C~~-~~p~~~v~W~k~g~~l~~~~~~~~~~~~--~~---~~~L~I~~v~~~D~G 85 (104)
T 1pd6_A 12 EKKSTAFQKKLEPAYQVSKGHKIRLTVEL-ADHDAEVKWLKNGQEIQMSGSKYIFESI--GA---KRTLTISQCSLADDA 85 (104)
T ss_dssp CSTTSSCSEECCSEEEEETTSCEEEEEEC-SSSSSCCEEEESSSEECCCSSSSEEEEE--TT---EEEEEECSCSSSSCE
T ss_pred ccCCCEEEEcCCCcEEEecCCCEEEEEEE-cCCCCEEEEEECCEECCCCCCeEEEEec--CC---EEEEEECCCCcccCE
Confidence 3457888777666 789999999999999 6888899999999988766 55544322 21 347999999999999
Q ss_pred EEEEEEEcCCCceEEEEEEEEe
Q psy7036 83 LYKVKAKNKMGEVAASINLNFS 104 (254)
Q Consensus 83 ~Y~C~~~~~~~~~~~~~~l~v~ 104 (254)
.|+|.+.+ ....+.|.|.
T Consensus 86 ~Y~C~a~~----~~~~~~l~V~ 103 (104)
T 1pd6_A 86 AYQCVVGG----EKCSTELFVK 103 (104)
T ss_dssp EEEEEETT----EEECCEEEEE
T ss_pred EEEEEECC----CcEEEEEEEe
Confidence 99999943 3445555553
No 369
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.61 E-value=1.3e-15 Score=108.36 Aligned_cols=128 Identities=13% Similarity=0.025 Sum_probs=87.6
Q ss_pred CCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceee--EEEEccCCCCCceeEE
Q psy7036 111 LAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFA--SLEIIDVTIEDAGKYK 188 (254)
Q Consensus 111 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~i~~~~~~d~G~y~ 188 (254)
.+|.+...+. ..+.+|+.++|.|.+.+ +.+.+.|+|++..+..... ......+ .. .|.|.+++.+|+|.|+
T Consensus 8 ~~P~i~~~p~-~~v~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~~~-~~~~~~~----~~~~~L~I~~v~~~D~G~Y~ 80 (218)
T 1uct_A 8 PMPFISAKSS-PVIPLDGSVKIQCQAIR-EAYLTQLMIIKNSTYREIG-RRLKFWN----ETDPEFVIDHMDANKAGRYQ 80 (218)
T ss_dssp CCCCEEESSC-SEEETTCCEEEEECCCT-TCSEEEEEEEETTEEEECS-EECC--------CCCEEEECSCCGGGCEEEE
T ss_pred CCCEEEecCC-CccCCCCCEEEEEEcCC-CCCEEEEEECCCccccccc-ccCCCCc----ceeeEEEEcccccccCEEEE
Confidence 3455554444 46788999999999876 6778999998865532211 1000001 12 6999999999999999
Q ss_pred EEEEcCCCcc--eEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEeccCCCceeC
Q psy7036 189 VTAKNELGES--NATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEPEPTISW 254 (254)
Q Consensus 189 C~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p~p~~~W 254 (254)
|.+.|..+.. +..+.|.|... ..+|.+...+ ...+.+|+ .++|.|.+.+.|.+.+.|
T Consensus 81 C~a~n~~~~~~~s~~~~l~V~~~-------~~~P~i~~~p-~~~v~~G~-~v~L~C~~~~~~~~~~~W 139 (218)
T 1uct_A 81 CQYRIGHYRFRYSDTLELVVTGL-------YGKPFLSADR-GLVLMPGE-NISLTCSSAHIPFDRFSL 139 (218)
T ss_dssp EEEEETTTEEEECCCEEEEEECS-------SCCCEEEESS-CSEECTTC-CCEEEEECSSSCCSEEEE
T ss_pred EEEEcCCCceeecCCEEEEEcCc-------ccCCEEEeCC-CCccCCCC-CEEEEEeCCCCCCCEEEE
Confidence 9999986533 34456666531 2256666555 34678899 999999777777788887
No 370
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.61 E-value=2.7e-15 Score=106.78 Aligned_cols=124 Identities=15% Similarity=0.209 Sum_probs=81.3
Q ss_pred ecCCCeEEEEEEEeeC---CC-CeEEEEECCEecccCCcceEEEcCCCC-ceeeEEEEccCCCCCceeEEEEEEcCCCcc
Q psy7036 124 EDDGKRLLFECRIQAD---PA-PTVIWSHSGVQVKEDKRHKFSIDKDGH-SYFASLEIIDVTIEDAGKYKVTAKNELGES 198 (254)
Q Consensus 124 ~~~g~~~~l~C~~~~~---~~-~~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~ 198 (254)
+..|+.+.|.|.+.+. |. +.+.|+|++..+............++. ...+.|.|.+++.+|.|.|+|.+.|..+..
T Consensus 23 v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~g~Y~C~~~~~~~~~ 102 (218)
T 2rgs_A 23 LMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWMSGKEFKCKVNNKDLPS 102 (218)
T ss_dssp HCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHHHHHTTCCEEEEEEETTCSS
T ss_pred hccCCCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHHHcCCCCeEEEEEECCcCCC
Confidence 6789999999999886 33 689999999776532211111111221 234579999999999999999999987654
Q ss_pred eEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEec-cCCC-ceeC
Q psy7036 199 NATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVG-EPEP-TISW 254 (254)
Q Consensus 199 ~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~-~p~p-~~~W 254 (254)
.....+.... ....+|.+...+......+|+ .+.|.|.+.| +|.+ .++|
T Consensus 103 ~~~~~v~~~~------~~~~~P~v~~~~~~~~~~~g~-~~~L~C~~~g~~P~~~~v~W 153 (218)
T 2rgs_A 103 PIERTISKIK------GLVRAPQVYILPPPAEQLSRK-DVSLTCLVVGFNPGDISVEW 153 (218)
T ss_dssp CEEEEECCCC------CCCBCCEEEEECCCGGGTTSS-EEEEEEEEEEEBSSCCEEEE
T ss_pred cceEEEeecC------CCCCCCEEEEECCChHHhcCC-ceEEEEEEEeeeCCCcEEEE
Confidence 2222221100 012356665444333334678 9999999999 5766 7998
No 371
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.61 E-value=8.3e-16 Score=94.72 Aligned_cols=85 Identities=16% Similarity=0.315 Sum_probs=68.4
Q ss_pred CCCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEE
Q psy7036 5 EDFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLY 84 (254)
Q Consensus 5 ~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 84 (254)
...+|.|...|....+.+|++++|.|.+.+.|.+.+.|+|++..+..... ..|.|.+++..|+|.|
T Consensus 7 ~~~~~~i~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~--------------~~L~i~~v~~~d~G~Y 72 (96)
T 2ens_A 7 GLEEVQLVVEPEGGAVAPGGTVTLTCEVPAQPSPQIHWMKDGVPLPLPPS--------------PVLILPEIGPQDQGTY 72 (96)
T ss_dssp CCCSCCCEEESTTSEECTTCEEEEECCCSSCSSCCCCCEESSSBCSSCCC--------------SEEEEESCCTTTCEEE
T ss_pred CCCCCEEEECCCCCEEcCCCeEEEEEEEccCCCCEEEEEECCEECcCCCC--------------CEEEECCCCcccCEEE
Confidence 34567888899888999999999999999889899999999887654321 1799999999999999
Q ss_pred EEEEEcCCCceE--EEEEEEE
Q psy7036 85 KVKAKNKMGEVA--ASINLNF 103 (254)
Q Consensus 85 ~C~~~~~~~~~~--~~~~l~v 103 (254)
+|.+.|..+... ..+.|.|
T Consensus 73 ~C~a~n~~~~~~~s~~~~v~V 93 (96)
T 2ens_A 73 SCVATHSSHGPQESRAVSISI 93 (96)
T ss_dssp ECEECCSSCCCEECCCEEEEE
T ss_pred EEEEEeCCCCcEEEEEEEEEE
Confidence 999999655433 3445554
No 372
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.61 E-value=1e-14 Score=91.84 Aligned_cols=94 Identities=18% Similarity=0.176 Sum_probs=70.4
Q ss_pred CCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCE-EeeeC-------CcceEEEeecCCcceEEEEEEeccC
Q psy7036 6 DFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGET-QLSED-------TRTVMKTTPIGTNKYLVALELDDVI 77 (254)
Q Consensus 6 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~-~~~~~-------~~~~~~~~~~~~~~~~~~l~i~~~~ 77 (254)
...|.|...+....+.+|++++|.|.+.+.+.+.+.|++++. .+... .++.+... . .....|.|.+++
T Consensus 4 ~~~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~--~--~~~~~L~I~~v~ 79 (108)
T 3m45_A 4 KGSQGQFPLTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRA--S--WHELSISVSDVS 79 (108)
T ss_dssp ----CCCEECCCEEEETTSCEEEEEEESSCSSCCEEEECTTCCEEEETTEECSCCTTEEEEEE--S--SSEEEEEECSCC
T ss_pred ccCCCccccCCeeEEEeCCcEEEEeEEcCCCccEEEEEcCCCceEEEcCCcccccCcEEEeec--C--CCcEEEEECCCC
Confidence 346778888889999999999999999988889999999875 33221 13222211 1 134489999999
Q ss_pred CCCCeEEEEEEEcCCCceEEEEEEEEe
Q psy7036 78 ETDAGLYKVKAKNKMGEVAASINLNFS 104 (254)
Q Consensus 78 ~~d~G~Y~C~~~~~~~~~~~~~~l~v~ 104 (254)
..|+|.|+|.+.| .+.....+.|.|.
T Consensus 80 ~~D~G~Y~C~~~n-~~~~~~~~~L~V~ 105 (108)
T 3m45_A 80 LSDEGQYTCSLFT-MPVKTSKAYLTVL 105 (108)
T ss_dssp GGGCEEEEEEECS-SSCEEEEEEEEEE
T ss_pred hhHCeEEEEEEEc-CCCcEEEEEEEEE
Confidence 9999999999999 7777788888876
No 373
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.61 E-value=6.5e-15 Score=92.62 Aligned_cols=94 Identities=28% Similarity=0.484 Sum_probs=74.5
Q ss_pred CCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEE
Q psy7036 111 LAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVT 190 (254)
Q Consensus 111 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~ 190 (254)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.......+.. ++. .+.|.|.+++.+|.|.|+|.
T Consensus 12 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~--~~~--~~~L~i~~~~~~D~G~Y~C~ 87 (107)
T 3irg_B 12 SPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPA--DGA--EHGLLLTAALPTDAGVYVCR 87 (107)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCE--ETT--EEEEEESSCCGGGCEEEEEE
T ss_pred CCCeeEcCCccEEEeCCCeEEEEEEEeecCCCEEEEEECCeECCCCCcEEEEe--CCC--EEEEEEccCCHHhCEEEEEE
Confidence 34555555667788899999999999999999999999999886554433322 221 23799999999999999999
Q ss_pred EEcCCCcceEEEEEEEec
Q psy7036 191 AKNELGESNATISLNFDS 208 (254)
Q Consensus 191 ~~~~~~~~~~~~~~~v~~ 208 (254)
+.|..|.....+.|.|..
T Consensus 88 a~n~~g~~~~~~~l~V~~ 105 (107)
T 3irg_B 88 ARNAAGEAYAAAAVTVLE 105 (107)
T ss_dssp EEETTEEEEEEEEEEEEC
T ss_pred EEcCCCcEEEEEEEEEEc
Confidence 999999888888888763
No 374
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=99.61 E-value=7.5e-15 Score=92.50 Aligned_cols=90 Identities=23% Similarity=0.382 Sum_probs=71.2
Q ss_pred CCCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEE
Q psy7036 5 EDFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLY 84 (254)
Q Consensus 5 ~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 84 (254)
...+|.|...+....+.+|++++|.|.+.+. +.+.|+|++..+....++.+... + ..+.|.|.+++..|+|.|
T Consensus 5 ~~~pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~~~~~~~~~~~~~--~---~~~~L~I~~v~~~D~G~Y 77 (108)
T 2dm7_A 5 SSGPARFTQDLKTKEASEGATATLQCELSKV--APVEWKKGPETLRDGGRYSLKQD--G---TRCELQIHDLSVADAGEY 77 (108)
T ss_dssp SCCCCCBCSCCBCCEEETTSCEEEEEEBSSS--CCCEEESSSSBCCSSSSCEEEEE--T---TEEEEEESSCCTTTCSEE
T ss_pred cCCCCeeeecCCcEEEeCCCcEEEEEEeCCC--CeeEEEECCEECCCCCCEEEEec--C---CEEEEEECCCCcccCEEE
Confidence 4568899988999999999999999999754 68999999998876666555432 1 234799999999999999
Q ss_pred EEEEEcCCCceEEEEEEEEec
Q psy7036 85 KVKAKNKMGEVAASINLNFSR 105 (254)
Q Consensus 85 ~C~~~~~~~~~~~~~~l~v~~ 105 (254)
+|.+.| ....+.|.|..
T Consensus 78 ~C~a~n----~~~~~~l~V~~ 94 (108)
T 2dm7_A 78 SCMCGQ----ERTSATLTVRA 94 (108)
T ss_dssp EEEETT----EEEEEECEEEC
T ss_pred EEEEcC----CEEEEEEEEec
Confidence 999943 45666777763
No 375
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.61 E-value=5.7e-14 Score=88.37 Aligned_cols=97 Identities=16% Similarity=0.270 Sum_probs=70.9
Q ss_pred CCCccccCCCeeeecCCCeEEEEEEEeeCCC---CeEEEEECCEeccc-C--CcceEE--EcCCCCceeeEEEEccCCCC
Q psy7036 111 LAPTFLKKPSIRQEDDGKRLLFECRIQADPA---PTVIWSHSGVQVKE-D--KRHKFS--IDKDGHSYFASLEIIDVTIE 182 (254)
Q Consensus 111 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~---~~~~W~~~~~~~~~-~--~~~~~~--~~~~~~~~~~~l~i~~~~~~ 182 (254)
..|.+...+..+.+..|+.++|.|.+.+.|. +.+.|+|++..... . ....+. ...........|.|.+++.+
T Consensus 3 p~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 82 (108)
T 3cx2_A 3 PIGLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPA 82 (108)
T ss_dssp CCCSCSBCCCCEEEETTCCEEEEEEEECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGG
T ss_pred CccEEEeCCCcEEEeCCCCEEEEEEECCCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCc
Confidence 3456667777888999999999999999988 99999998732211 1 111111 11111223458999999999
Q ss_pred CceeEEEEEEcCCCcceEEEEEEEe
Q psy7036 183 DAGKYKVTAKNELGESNATISLNFD 207 (254)
Q Consensus 183 d~G~y~C~~~~~~~~~~~~~~~~v~ 207 (254)
|+|.|+|.+.|..|....++.|.|.
T Consensus 83 D~G~Y~C~a~N~~G~~~~~~~L~V~ 107 (108)
T 3cx2_A 83 FTGSYRCEVSTKDKFDCSNFNLTVH 107 (108)
T ss_dssp GCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred cCEEEEEEEecCCCceEEEEEEEEe
Confidence 9999999999999998888888774
No 376
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.60 E-value=2.4e-15 Score=108.22 Aligned_cols=158 Identities=14% Similarity=0.221 Sum_probs=82.0
Q ss_pred eEEEEEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeee-ecCCCeEEEEEEEeeCC----CCeEEEEECCEecccC
Q psy7036 82 GLYKVKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQ-EDDGKRLLFECRIQADP----APTVIWSHSGVQVKED 156 (254)
Q Consensus 82 G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~-~~~g~~~~l~C~~~~~~----~~~~~W~~~~~~~~~~ 156 (254)
|.|.|.+.+..+. ......+ ..|..+...+.... +..|+.+.|.|.+.+++ ...+.|+++|..+...
T Consensus 1 ~~~~~~~~~~~~~--c~~~~~~------~~P~v~i~~ps~~~~l~~g~~~~L~C~v~g~~p~P~~i~v~W~k~g~~l~~~ 72 (240)
T 4acp_A 1 GTKSCDKTHTCPP--CPAPELL------GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNA 72 (240)
T ss_dssp ------------------------------CEEEEECCCHHHHHSSSSCCEEEEEEESCCC--CCCEEEEEETTEEECCC
T ss_pred CceeeeeeecCCC--CCccccC------CCCEEEEECcChHHhcccCCCcEEEEEEeccccCCCccEEEEEECCcccCCc
Confidence 6789988876543 1111111 12222333334444 45699999999999874 3379999999987543
Q ss_pred CcceEEEcCCC-CceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCC
Q psy7036 157 KRHKFSIDKDG-HSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDL 235 (254)
Q Consensus 157 ~~~~~~~~~~~-~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~ 235 (254)
.........++ +...+.|.|.....+|.|.|+|.|.|..+.......+.... ....+|.+...+.......|+
T Consensus 73 ~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~YtC~v~h~~~~~~~~~~i~~~~------~~~~~P~V~v~~~~~~~~~g~ 146 (240)
T 4acp_A 73 KTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK------GQPREPQVYTLPPSRDELTKN 146 (240)
T ss_dssp EECCCEEC---CEEEEEEEECCHHHHHHTCCEEEEEECC----CEEEEECCCC------SCCBCCEEEEECCCGGGGGSS
T ss_pred eeccceECCCCeEEEEEEEEEechhccCCCEEEEEEEcCCCCccccccccccC------CCCCCCEEEEECCChHHhcCC
Confidence 22222222222 23346788887777789999999999876443333332111 012356665554444444577
Q ss_pred CcEEEEEEEecc-CCC-ceeC
Q psy7036 236 NDIVIECRLVGE-PEP-TISW 254 (254)
Q Consensus 236 ~~~~l~C~~~~~-p~p-~~~W 254 (254)
.+.|.|.+.|. |.+ .++|
T Consensus 147 -~~~L~C~~~gf~P~~i~v~W 166 (240)
T 4acp_A 147 -QVSLTCLVKGFYPSDIAVEW 166 (240)
T ss_dssp -EEEEEEEEEEEBSSCCEEEE
T ss_pred -ceEEEEEEeEEeCCCcEEEE
Confidence 99999999995 654 6888
No 377
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.60 E-value=1.1e-14 Score=90.16 Aligned_cols=90 Identities=21% Similarity=0.328 Sum_probs=71.7
Q ss_pred CCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEE
Q psy7036 111 LAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVT 190 (254)
Q Consensus 111 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~ 190 (254)
.++.+...+....+.+|+.+.|.|.+ .|.+.+.|+|+|..+....+..+... +. ...|.|.++..+|+|.|+|.
T Consensus 6 ~p~~~~~~~~~~~v~~G~~v~l~C~v--~p~p~v~W~k~g~~l~~~~r~~i~~~--~~--~~~L~I~~v~~~D~G~Y~C~ 79 (100)
T 2yuz_A 6 SGLKILTPLTDQTVNLGKEICLKCEI--SENIPGKWTKNGLPVQESDRLKVVQK--GR--IHKLVIANALTEDEGDYVFA 79 (100)
T ss_dssp CCCCCSBCCCCEEEETTSCCCEEEEC--SSCCCEEEEETTEECCCCSSEEEEEC--SS--EEEEEESSCCGGGCSEEEEE
T ss_pred CCCEEeccCCceEEcCCCCEEEEEEe--CCCCeEEEEECCEECCCCCcEEEEEe--CC--EEEEEECCCChhhCEEEEEE
Confidence 45666777778889999999999999 78889999999999876665554433 22 13799999999999999999
Q ss_pred EEcCCCcceEEEEEEEec
Q psy7036 191 AKNELGESNATISLNFDS 208 (254)
Q Consensus 191 ~~~~~~~~~~~~~~~v~~ 208 (254)
|.|. ....+..|.|..
T Consensus 80 a~N~--~~~~~a~L~V~~ 95 (100)
T 2yuz_A 80 PDAY--NVTLPAKVHVIS 95 (100)
T ss_dssp ESSS--CCCEEEEEEEEC
T ss_pred EcCC--CeeEEEEEEEeC
Confidence 9997 455666777764
No 378
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.60 E-value=6.3e-15 Score=95.00 Aligned_cols=94 Identities=18% Similarity=0.294 Sum_probs=66.7
Q ss_pred CCCceeecCCCeEEEEEEEeeC--CCCceEEEeCCEEeeeC---CcceEEEeecCCcceEEEEEEeccCCCCCeEEEEEE
Q psy7036 14 KPQLRQEDEGNRLIFECQLLCN--PKPDIVWFRGETQLSED---TRTVMKTTPIGTNKYLVALELDDVIETDAGLYKVKA 88 (254)
Q Consensus 14 ~~~~~~v~~g~~v~l~C~~~~~--~~~~v~W~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 88 (254)
.+..+.+.+|++++|.|.+.|. +.+.+.|++++..+... ................+.|.|.+++..|+|.|+|.+
T Consensus 14 p~~~v~v~~G~~v~L~C~~~g~p~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a 93 (122)
T 3s35_X 14 PSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAA 93 (122)
T ss_dssp SCSCEEEEETCCEEEEEEEEECTTCCCEEEEECSCTTCCHHHHBCCSCCEEEETTEEEEEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCCEEEecCCeEEEEEEEEcCCCCcEEEEEECCCcccCCceeeeeccccccCCceeeEEEEEEECCCCcccCEEEEEEE
Confidence 3444588999999999999984 45789999988743210 010111111111123347999999999999999999
Q ss_pred EcCCCceEEEEEEEEeccc
Q psy7036 89 KNKMGEVAASINLNFSREQ 107 (254)
Q Consensus 89 ~~~~~~~~~~~~l~v~~~~ 107 (254)
.|..|.....+.|.|.+.+
T Consensus 94 ~n~~g~~~~~~~l~V~~~p 112 (122)
T 3s35_X 94 SSGLMTKKNSTFVRVHEKP 112 (122)
T ss_dssp ECSSCEEEEEEEEEEEEEE
T ss_pred ccCCCceEEEEEEEEeccC
Confidence 9999998889999987543
No 379
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.60 E-value=2e-15 Score=103.83 Aligned_cols=115 Identities=17% Similarity=0.264 Sum_probs=82.3
Q ss_pred CCccccCCCeeeecCCCeEEEEEEEeeCCCC-eEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEE
Q psy7036 112 APTFLKKPSIRQEDDGKRLLFECRIQADPAP-TVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVT 190 (254)
Q Consensus 112 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~-~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~ 190 (254)
+|.+...+....+.+|+.+.|.|.+.+.+.+ .+.|++++..+... + ..|.|.+++.+|+|.|+|.
T Consensus 4 ~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~~~---------~-----~~L~i~~v~~~d~G~Y~C~ 69 (176)
T 1f2q_A 4 KPKVSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEET---------N-----SSLNIVNAKFEDSGEYKCQ 69 (176)
T ss_dssp CCCCEEESSCSEEETTCCEEEECCTTCC----CCEEEETTEECSCC---------S-----SEEEECSCCGGGCEEEEEE
T ss_pred CCEEEcCCCCcceecCCcEEEEEeCCCCCCcceEEEEECCeECCCC---------c-----eEEEEeccceecCEEEEEE
Confidence 4455555555678899999999999888775 69999999876532 1 2799999999999999999
Q ss_pred EEcCCCcceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEe-ccCCCceeC
Q psy7036 191 AKNELGESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLV-GEPEPTISW 254 (254)
Q Consensus 191 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~-~~p~p~~~W 254 (254)
+.|..+... +.+.|.. ++.+...+ ...+.+|+ .+.|.|.+. +.|.+.+.|
T Consensus 70 ~~~~~~s~~--~~l~V~~----------~~~~~~~~-~~~~~~g~-~~~l~C~~~~~~p~~~~~W 120 (176)
T 1f2q_A 70 HQQVNESEP--VYLEVFS----------DWLLLQAS-AEVVMEGQ-PLFLRCHGWRNWDVYKVIY 120 (176)
T ss_dssp CTTSSCCCC--EEEEEEC----------SSEEEEES-CSEEETTS-CEEEEEEEGGGCCEEEEEE
T ss_pred cCCcccccc--EEEEEeC----------cceeecCC-cceeeCCC-CEEEEEEecCCCCceEEEE
Confidence 988665444 4455542 23333222 34667888 999999995 566678888
No 380
>1ntl_A CRRY-IG; immunology, complement, glycoprotein, SCR, CCP, immune system; NMR {Mus musculus}
Probab=99.60 E-value=9.6e-14 Score=111.94 Aligned_cols=183 Identities=14% Similarity=0.187 Sum_probs=113.1
Q ss_pred eEeCCCcee-ecCCCeEEEEEEEeeCCC----CceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEE
Q psy7036 11 FTQKPQLRQ-EDEGNRLIFECQLLCNPK----PDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYK 85 (254)
Q Consensus 11 ~~~~~~~~~-v~~g~~v~l~C~~~~~~~----~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 85 (254)
|...+.... +..+.+..|.|.+.+... ..|+|++++..+............++.....+.|.|......|.+.|+
T Consensus 345 fl~~~~~~~~~~~~~~~~l~C~~~~~~p~~~~i~v~W~~~~~~~~~~~t~~~~~~~n~~~~~~s~L~i~~~~~~~~~~y~ 424 (551)
T 1ntl_A 345 FIFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFK 424 (551)
T ss_pred EEcCCCcccceeeccCcceEEEEEecccCCCceEEEEEECCccccccccCCceECCCCeEEEEEeeEcCHHHccCCceEE
Confidence 444444444 667889999999987533 589999999866432211111122233344557888888888899999
Q ss_pred EEEEcCCCc--eEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCC--CeEEEEECCEecccCCcceE
Q psy7036 86 VKAKNKMGE--VAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPA--PTVIWSHSGVQVKEDKRHKF 161 (254)
Q Consensus 86 C~~~~~~~~--~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~--~~~~W~~~~~~~~~~~~~~~ 161 (254)
|.+.+.... ....+.+.+.. ..+|.+...........|+.++|.|.+.++.+ ..+.|+|+|+.+........
T Consensus 425 C~v~~~~~~~~~~~~~~~~~~~----~~~P~V~~~~~~~~~~~~~~~~L~C~v~gfyP~~i~v~W~k~g~~~~~~~~~~~ 500 (551)
T 1ntl_A 425 CRVNSAAFPAPIEKTISKTKGR----PKAPQLYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQWNGQPAENYKNTQP 500 (551)
T ss_pred EEEecCCCCCCeEEEEecCCCC----CcCCceEEeCCChhhccCCceEEEEEEEEeECCCCEEEEEECCEEccCceeccc
Confidence 999987653 22233333211 13344322222222346889999999998644 47999999998753222222
Q ss_pred EEcCCCC-ceeeEEEEccCCCCCceeEEEEEEcCCCc
Q psy7036 162 SIDKDGH-SYFASLEIIDVTIEDAGKYKVTAKNELGE 197 (254)
Q Consensus 162 ~~~~~~~-~~~~~l~i~~~~~~d~G~y~C~~~~~~~~ 197 (254)
....++. ...+.|.|..-..++.+.|+|.|.+....
T Consensus 501 ~~~~dgty~~~s~l~v~~~~~~~~~~ytC~V~h~~l~ 537 (551)
T 1ntl_A 501 IMNTNGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGLH 537 (551)
T ss_pred eeCCCCCEEEEEEEEEcHHHcCCCCeEEEEEEECCCC
Confidence 2333332 33456777765556678999999987654
No 381
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.60 E-value=2e-15 Score=96.57 Aligned_cols=99 Identities=23% Similarity=0.493 Sum_probs=71.4
Q ss_pred CCCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCc---ceEEEeecCCcceEEEEEEeccCCCCC
Q psy7036 5 EDFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTR---TVMKTTPIGTNKYLVALELDDVIETDA 81 (254)
Q Consensus 5 ~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~i~~~~~~d~ 81 (254)
+..+|.|...|....+.+|++++|.|.+.|.|.+.+.|+|++..+..... .......++ ......+.+.+++..|+
T Consensus 6 ~~~pP~i~~~p~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~v~~~D~ 84 (117)
T 2v9t_A 6 EDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSG-SLFFLRIVHGRKSRPDE 84 (117)
T ss_dssp CCEEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCSSCSEEECTTS-CEEESSCCCBTTBCSSC
T ss_pred ccCCCeeEcCCCCEEEcCCCcEEEEEECCccCCCeEEEEECCEeccccCCCCcceeEEecCC-cEEEEEEEeCCCCcCcC
Confidence 45689999999999999999999999999999999999999998865421 111111111 11111223336689999
Q ss_pred eEEEEEEEcCCCceE-EEEEEEEe
Q psy7036 82 GLYKVKAKNKMGEVA-ASINLNFS 104 (254)
Q Consensus 82 G~Y~C~~~~~~~~~~-~~~~l~v~ 104 (254)
|.|+|.+.|..|... ..+.|.+.
T Consensus 85 G~Y~C~a~N~~G~~~s~~~~l~~~ 108 (117)
T 2v9t_A 85 GVYVCVARNYLGEAVSHDASLEVA 108 (117)
T ss_dssp EEEEEEEEETTEEEECCCEEEEEC
T ss_pred EEEEEEEEeCccceEeeeEEEEhh
Confidence 999999999998754 35556654
No 382
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.60 E-value=2.2e-15 Score=94.52 Aligned_cols=93 Identities=30% Similarity=0.544 Sum_probs=75.5
Q ss_pred CCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEE
Q psy7036 111 LAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVT 190 (254)
Q Consensus 111 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~ 190 (254)
.+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+.......+..... ...|.|.+++.+|+|.|+|.
T Consensus 13 ~~~~i~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~----~~~L~I~~v~~~D~G~Y~C~ 88 (106)
T 1nct_A 13 LAARILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTKY----KSTFEISSVQASDEGNYSVV 88 (106)
T ss_dssp CCCEEEECCCCEEESSSSCEECCEEEECSSCCBCCBCSSSSCCTTCSSEEEEECSS----EEEEEECCCCSSCCSEEEEC
T ss_pred CCCEEEECCCCEEEeCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCC----EEEEEECcCCchhCEEEEEE
Confidence 45556666777889999999999999999999999999998876555444433211 23899999999999999999
Q ss_pred EEcCCCcceEEEEEEEe
Q psy7036 191 AKNELGESNATISLNFD 207 (254)
Q Consensus 191 ~~~~~~~~~~~~~~~v~ 207 (254)
+.|..|....++.|.|.
T Consensus 89 a~N~~G~~~~~~~l~V~ 105 (106)
T 1nct_A 89 VENSEGKQEAEFTLTIQ 105 (106)
T ss_dssp CBCSSCBCCEEEEEEEC
T ss_pred EEeCCCeEEEEEEEEEE
Confidence 99999998888888774
No 383
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.60 E-value=1.2e-14 Score=105.36 Aligned_cols=133 Identities=16% Similarity=0.273 Sum_probs=85.6
Q ss_pred eeeecCCCeEEEEEEEeeCC--CCeEEEEECC--Eec---------------ccCCcceEEEcCCCCceeeEEEEccCCC
Q psy7036 121 IRQEDDGKRLLFECRIQADP--APTVIWSHSG--VQV---------------KEDKRHKFSIDKDGHSYFASLEIIDVTI 181 (254)
Q Consensus 121 ~~~~~~g~~~~l~C~~~~~~--~~~~~W~~~~--~~~---------------~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 181 (254)
...+.+|+.++|.|.+.+.| .+.+.|+|+. ... ......++....+......+|.|.+++.
T Consensus 11 ~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 90 (247)
T 2ghw_B 11 GGVVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRA 90 (247)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSCCG
T ss_pred CEEEecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcCCH
Confidence 45778999999999999887 5789999842 110 0001112222211111124799999999
Q ss_pred CCceeEEEEEEcCCCc--ceEEEEEEEecCCCCCC-----CCCCCCeeecCCccccccCCCCcEEEEEEEeccCCCceeC
Q psy7036 182 EDAGKYKVTAKNELGE--SNATISLNFDSDDAPVP-----GEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEPEPTISW 254 (254)
Q Consensus 182 ~d~G~y~C~~~~~~~~--~~~~~~~~v~~~~~~~~-----~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p~p~~~W 254 (254)
+|+|.|+|.+.|..+. ......|.|.......+ ....++.+...+....+.+|+ .+.|.|.+.+.|.|.++|
T Consensus 91 ~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~-~v~L~C~~~~~~~~~v~W 169 (247)
T 2ghw_B 91 EDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGE-RATLSCRASQSVRSNLAW 169 (247)
T ss_dssp GGCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEECTTS-CEEEEEEESSCCTTCEEE
T ss_pred HHCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCC-cEEEEEEeCCCccceEEE
Confidence 9999999999997322 22334566654211000 001244555566666788999 999999999999889998
No 384
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.59 E-value=1.6e-14 Score=101.88 Aligned_cols=117 Identities=17% Similarity=0.256 Sum_probs=84.1
Q ss_pred eeecCCCeEEEEEEEeeCCCCeEEEEECCEecccC-----------------CcceEEEcCCCCceeeEEEEccCCCCCc
Q psy7036 122 RQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKED-----------------KRHKFSIDKDGHSYFASLEIIDVTIEDA 184 (254)
Q Consensus 122 ~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 184 (254)
..+.+|+.+.|.|...+.+.+.+.|++++...... ...+.....++ .|.|.+++.+|+
T Consensus 9 ~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~-----~L~i~~v~~~D~ 83 (208)
T 3r4d_A 9 PQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNG-----SLLFQMITMKDM 83 (208)
T ss_dssp SEEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTS-----CEEECSCCGGGC
T ss_pred ceeecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecCC-----eEEEccccccCC
Confidence 45678999999999878888899999875422111 01122222222 699999999999
Q ss_pred eeEEEEEEcCC-CcceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEeccCCCceeC
Q psy7036 185 GKYKVTAKNEL-GESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEPEPTISW 254 (254)
Q Consensus 185 G~y~C~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p~p~~~W 254 (254)
|.|+|.+.+.. +.....+.|.|... ...|.+...+.. +.+|+ .+.|.|.+.+.| |.+.|
T Consensus 84 G~Y~C~~~~~~~~~~~~~~~l~V~~~-------~~~p~i~~~~~~--~~~g~-~v~l~C~~~~~p-p~i~W 143 (208)
T 3r4d_A 84 GVYTLDMTDENYRRTQATVRFHVHQP-------VTQPFLQVTNTT--VKELD-SVTLTCLSNDIG-ANIQW 143 (208)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEEECC-------CCCCEEEESCSS--CCTTC-CEEEEEECSCTT-CEEEE
T ss_pred eEEEEEEEcccCceeEEEEEEEeccC-------CCCCEEecCCce--EeeCC-CEEEEEECCCCC-CceEE
Confidence 99999999985 44566677777642 224566655444 77888 999999999876 78888
No 385
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.59 E-value=1.3e-14 Score=89.13 Aligned_cols=87 Identities=23% Similarity=0.347 Sum_probs=70.3
Q ss_pred CCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEE
Q psy7036 111 LAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVT 190 (254)
Q Consensus 111 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~ 190 (254)
.+|.+...+....+..|+.+.|.|.+.+.| +.+.|+|++..+....+ +... ++ .|.|.+++.+|+|.|+|.
T Consensus 8 ~pp~~~~~~~~~~v~~G~~v~l~C~~~g~p-p~i~W~k~g~~~~~~~~--~~~~-~~-----~L~i~~~~~~D~G~Y~C~ 78 (95)
T 2ckn_A 8 QPWGVPVEVESLLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLVESNR--TRIT-GE-----EVEVRDSIPADSGLYACV 78 (95)
T ss_dssp CSCCBTTBBCCEEECTTSCEEEECCEESSC-CEEEEEBTTBCCCCCSS--EEEC-SS-----EEEESSCCGGGSEEEEEE
T ss_pred CCCEEEcCcceEEEcCCCeEEEEEECCCCC-CceEEEECCEecCCCCC--EEEe-CC-----EEEECCCChHHCEEEEEE
Confidence 455666666677889999999999999987 79999999988765443 2222 22 799999999999999999
Q ss_pred EEcCCCcceEEEEEEE
Q psy7036 191 AKNELGESNATISLNF 206 (254)
Q Consensus 191 ~~~~~~~~~~~~~~~v 206 (254)
|.|..|.....+.|.|
T Consensus 79 a~n~~g~~~~~~~l~V 94 (95)
T 2ckn_A 79 TSSPSGSDTTYFSVNV 94 (95)
T ss_dssp EEETTEEEEEEEEEEE
T ss_pred eccCCCcEEEEEEEEE
Confidence 9999998877777765
No 386
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.59 E-value=9.1e-15 Score=103.65 Aligned_cols=126 Identities=18% Similarity=0.281 Sum_probs=84.1
Q ss_pred CCeeeecCCCeEEEEEEEeeCCCCeEEEEECCE--ec----------ccCCcceEEEcCCCCceeeEEEEccCCCCCcee
Q psy7036 119 PSIRQEDDGKRLLFECRIQADPAPTVIWSHSGV--QV----------KEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGK 186 (254)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~--~~----------~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 186 (254)
+..+.+..|+.+.|.|.+.+.|.+.+.|+|+.. .+ ......++.....+ ....|.|.+++.+|+|.
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~L~I~~v~~~D~G~ 85 (213)
T 3d9a_L 8 PATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSG--TDFTLSINSVETEDFGM 85 (213)
T ss_dssp CSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEET--TEEEEEESSCCGGGCEE
T ss_pred CccEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCC--CEEEEEECCCChhhCEE
Confidence 456678899999999999998888999998532 11 00101122221111 12379999999999999
Q ss_pred EEEEEEcCCCcc-eEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEec-cCCC-ceeC
Q psy7036 187 YKVTAKNELGES-NATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVG-EPEP-TISW 254 (254)
Q Consensus 187 y~C~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~-~p~p-~~~W 254 (254)
|+|.+.|..+.. .....+.|... ..+|.+...+....+..|+ .+.|.|.+.| .|.+ .++|
T Consensus 86 Y~C~~~~~~~~~~~~~~~l~V~~~-------~~~p~v~~~~~~~~~~~g~-~~~l~C~~~g~~p~~~~v~W 148 (213)
T 3d9a_L 86 YFCQQSNSWPYTFGGGTKLEIKRA-------DAAPTVSIFPPSSEQLTSG-GASVVCFLNNFYPKDINVKW 148 (213)
T ss_dssp EEEEECSSSSCEECCCEEEEECCC-------CBCCEEEEECCCHHHHHTT-EEEEEEEEEEEBSSCCEEEE
T ss_pred EEEeeecCCcceeCCCEEEEEecC-------CCCceeEeECCChhhcCCC-cEEEEEEEeeecCCceEEEE
Confidence 999999987643 22345556431 1255565544333455788 9999999988 5665 7888
No 387
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.59 E-value=2.1e-14 Score=102.36 Aligned_cols=128 Identities=20% Similarity=0.320 Sum_probs=83.0
Q ss_pred CeeeecCCCeEEEEEEEeeCC--CCeEEEEECC--Ee---c-ccC----C---------cceEEEcCCCCceeeEEEEcc
Q psy7036 120 SIRQEDDGKRLLFECRIQADP--APTVIWSHSG--VQ---V-KED----K---------RHKFSIDKDGHSYFASLEIID 178 (254)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~~~--~~~~~W~~~~--~~---~-~~~----~---------~~~~~~~~~~~~~~~~l~i~~ 178 (254)
....+..|+.+.|.|.+.+.+ .+.+.|+|++ .. + ... . ..++....+.......|.|.+
T Consensus 8 ~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 87 (220)
T 1pz5_B 8 GGGLVQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQMNN 87 (220)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEECS
T ss_pred CCEEEcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEEcc
Confidence 345678899999999998766 6789999853 11 1 000 0 112222111111124799999
Q ss_pred CCCCCceeEEEEEEcCCCcc---eEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEecc-CCC-cee
Q psy7036 179 VTIEDAGKYKVTAKNELGES---NATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGE-PEP-TIS 253 (254)
Q Consensus 179 ~~~~d~G~y~C~~~~~~~~~---~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~-p~p-~~~ 253 (254)
++.+|+|.|.|.+.+..+.. .....+.|... ...+|.+...+....+.+|+ .+.|.|.+.|. |.| .++
T Consensus 88 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~------~~~~P~i~~~~~~~~~~~g~-~v~L~C~~~g~~P~p~~v~ 160 (220)
T 1pz5_B 88 LRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSA------TTTAPSVYPLVPGCSDTSGS-SVTLGCLVKGYFPEPVTVK 160 (220)
T ss_dssp CCGGGCEEEEEEEECTTSSEEEECCCEEEEECSS------CCBCCEEEEECCCSCCSCSS-SEEEEEEEEEEBSSCCEEE
T ss_pred CCHHHCEEEEEEEecCCcccceECCCEEEEEccC------CCCCCeEEEcccccccCCCC-cEEEEEEEEEEeCCCeEEE
Confidence 99999999999999875421 13345666531 11245555433333467788 99999999987 888 899
Q ss_pred C
Q psy7036 254 W 254 (254)
Q Consensus 254 W 254 (254)
|
T Consensus 161 W 161 (220)
T 1pz5_B 161 W 161 (220)
T ss_dssp E
T ss_pred E
Confidence 8
No 388
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.59 E-value=5.2e-15 Score=102.88 Aligned_cols=125 Identities=14% Similarity=0.127 Sum_probs=83.9
Q ss_pred CccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEE
Q psy7036 113 PTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAK 192 (254)
Q Consensus 113 ~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~ 192 (254)
|.+...+.. .+.+|+.++|.|.+.+ +.+.+.|+|++..+....... ........|.|.+++.+|+|.|+|.+.
T Consensus 5 P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~-----~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 77 (188)
T 1oll_A 5 PFIWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPKP-----PERINKVKFYIPDMNSRMAGQYSCIYR 77 (188)
T ss_dssp CEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECCSS-----CTTCCEEEEEESSCCGGGCEEEEEEEE
T ss_pred CEEEeecCC-cCCCCCCEEEEEecCC-CCCEEEEEECCCccccccccc-----CCCcceeEEEeCcCCcccCeEEEEEec
Confidence 344433443 6778999999999864 356899999998764211100 001112379999999999999999999
Q ss_pred cCCCc--ceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEeccCCCceeC
Q psy7036 193 NELGE--SNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEPEPTISW 254 (254)
Q Consensus 193 ~~~~~--~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p~p~~~W 254 (254)
|..+. .+..+.|.|... ..+|.+...|. ..+.+|+ .++|.|.+.+. .+.+.|
T Consensus 78 ~~~~~~~~s~~~~l~V~~~-------~~~p~i~~~p~-~~v~~G~-~v~L~C~~~~~-~~~~~w 131 (188)
T 1oll_A 78 VGELWSEPSNLLDLVVTEM-------YDTPTLSVHPG-PEVISGE-KVTFYCRLDTA-TSMFLL 131 (188)
T ss_dssp ETTEECCCCCCEEEEEESC-------SCCCEEEEESC-SEEETTC-EEEEEEECSSS-CSEEEE
T ss_pred CCCCCCCCCCceEEEeccc-------CCCCeEEECCC-CccccCC-EEEEEEEcCCC-CCEEEE
Confidence 86543 244566666531 12566665553 4578899 99999998664 457777
No 389
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=99.59 E-value=4.7e-15 Score=92.59 Aligned_cols=89 Identities=19% Similarity=0.356 Sum_probs=70.9
Q ss_pred CCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEE
Q psy7036 6 DFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYK 85 (254)
Q Consensus 6 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 85 (254)
..+|.|...+....+.+|++++|.|.+.+.|.+ +.|+|++..+....++.+.. .+ ....|.|.+++..|+|.|+
T Consensus 6 ~~pp~~~~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~~~~l~~~~~~~~~~--~~---~~~~L~I~~v~~~D~G~Y~ 79 (103)
T 2e7b_A 6 SGPVRFQEALKDLEVLEGGAATLRCVLSSVAAP-VKWCYGNNVLRPGDKYSLRQ--EG---AMLELVVRNLRPQDSGRYS 79 (103)
T ss_dssp CCCCCCTBCCCCEEEESSSCEEEEEECSSCCCS-CEEEESSSBCCCSSSEEEEE--CS---SEEEEEECSCCTTTCCCEE
T ss_pred CCCCEEEecCccEEEECCCcEEEEEEEeCCCCC-eEEEECCEECCCCCcEEEEE--cC---CEEEEEEccCCcccCEEEE
Confidence 457888888999999999999999999988888 99999999887665554432 22 2347999999999999999
Q ss_pred EEEEcCCCceEEEEEEEEe
Q psy7036 86 VKAKNKMGEVAASINLNFS 104 (254)
Q Consensus 86 C~~~~~~~~~~~~~~l~v~ 104 (254)
|. .+.....+.|.|.
T Consensus 80 C~----~g~~~~~~~l~V~ 94 (103)
T 2e7b_A 80 CS----FGDQTTSATLTVT 94 (103)
T ss_dssp EE----CSSCBCCBCEEEE
T ss_pred EE----ECCcEEEEEEEEE
Confidence 98 3445556667775
No 390
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.59 E-value=2.6e-14 Score=89.58 Aligned_cols=90 Identities=19% Similarity=0.173 Sum_probs=70.8
Q ss_pred CCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCC----------cceEEEeecCCcceEEEEEEec
Q psy7036 6 DFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDT----------RTVMKTTPIGTNKYLVALELDD 75 (254)
Q Consensus 6 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~l~i~~ 75 (254)
..+|.|...+++..+.+|+++.|.|.+.+ .+.++|+|||..+..+. ++.+ ...+ ..+.|.|.+
T Consensus 6 ~p~~~~~~~l~d~~v~eG~~a~f~C~vs~--~p~v~W~knG~~l~~~~~~~~~~~~~~r~~i--~~~g---~~~~L~I~~ 78 (112)
T 2e6q_A 6 SGTARLVAGLEDVQVYDGEDAVFSLDLST--IIQGTWFLNGEELKSNEPEGQVEPGALRYRI--EQKG---LQHRLILHA 78 (112)
T ss_dssp CSCCCEEECCCCEEEETTCEEEEEEEESS--CCCCEEEESSCBCCSSCCCTTSCTTSCEEEE--CCBT---TEEEEEEES
T ss_pred cCCcEEecCCCCeEEcCCCcEEEEEEECC--CCeEEEEECCEECccCcccccccccccEEEE--EeCC---cEEEEEECC
Confidence 34678999999999999999999999986 77899999999998765 3333 2222 244899999
Q ss_pred cCCCCCeEEEEEEEcCCCceEEEEEEEEec
Q psy7036 76 VIETDAGLYKVKAKNKMGEVAASINLNFSR 105 (254)
Q Consensus 76 ~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~ 105 (254)
++.+|+|.|+|..-+ ....++.|.|..
T Consensus 79 v~~~D~G~Y~~~~~~---~~~ssA~L~V~~ 105 (112)
T 2e6q_A 79 VKHQDSGALVGFSCP---GVQDSAALTIQE 105 (112)
T ss_dssp CCSTTCSEEEEEEET---TEEEEEEEEEEC
T ss_pred CCHHHCccEEEEEEC---CeeEEEEEEEeC
Confidence 999999999875443 345678888874
No 391
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.59 E-value=2.6e-14 Score=101.29 Aligned_cols=126 Identities=17% Similarity=0.237 Sum_probs=84.7
Q ss_pred CCeeeecCCCeEEEEEEEeeCCCCeEEEEECCE--e---ccc-------CCcceEEEcCCCCceeeEEEEccCCCCCcee
Q psy7036 119 PSIRQEDDGKRLLFECRIQADPAPTVIWSHSGV--Q---VKE-------DKRHKFSIDKDGHSYFASLEIIDVTIEDAGK 186 (254)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~--~---~~~-------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 186 (254)
+..+.+.+|+.+.|.|.+.+.+.+.+.|+|... . +.. ....++.....+ ....|.|.+++.+|+|.
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~L~I~~v~~~D~G~ 85 (213)
T 3r06_A 8 PSSLPASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSG--RDSSFTISSLESEDIGS 85 (213)
T ss_dssp CSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET--TEEEEEESSCCGGGCSE
T ss_pred CCEEEecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccC--CEEEEEECCCCcccCEE
Confidence 456778899999999999998889999998421 0 000 001111111111 12379999999999999
Q ss_pred EEEEEEcCCCc-ceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEeccCCC--ceeC
Q psy7036 187 YKVTAKNELGE-SNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEPEP--TISW 254 (254)
Q Consensus 187 y~C~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p~p--~~~W 254 (254)
|+|.+.|..+. ......+.|.. ...+|.+...+....+..|+ .+.|.|.+.|.|++ .++|
T Consensus 86 Y~C~~~~~~~~~~~~~~~l~V~~-------~~~~p~v~~~~~~~~~~~~~-~v~l~C~~~g~~p~~~~v~W 148 (213)
T 3r06_A 86 YYCQQYYNYPWTFGPGTKLEIKR-------ADAKPTVSIFPPSSEQLGTG-SATLVCFVNNFYPKDINVKW 148 (213)
T ss_dssp EEEEECSSSSCEECCCEEEEECC-------CCBCCEEEEECCCHHHHTTT-EEEEEEEEEEEBSSCEEEEE
T ss_pred EEEecccCCceEEcCCceEEEec-------cCCCceeeeeCCCceecCCC-CcEEEEEEeeecCCceEEEE
Confidence 99999987543 23334555532 12366676666555666788 89999999987643 7888
No 392
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=99.59 E-value=1.2e-14 Score=95.70 Aligned_cols=90 Identities=19% Similarity=0.348 Sum_probs=67.5
Q ss_pred CCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCC--------cceEEEeecCCcceEEEEEEeccC
Q psy7036 6 DFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDT--------RTVMKTTPIGTNKYLVALELDDVI 77 (254)
Q Consensus 6 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~i~~~~ 77 (254)
..+|.|...|....+.+|++++|.|.+.|.|.+.+.|++++..+.... ..++.............|.|.+++
T Consensus 19 ~~pP~~~~~p~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~ 98 (137)
T 3qr2_A 19 SHMAGFVQAPLSQQRWVGGSVELHCEAVGSPVPEIQWWFEGQGPNDICSQLWDGARLDRVHIHATYHQHAASTISIDTLV 98 (137)
T ss_dssp --CCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEEEESSTTCCCEECCTTHHHHTEEEEEEESSSEEEEEEECSCC
T ss_pred CCCCeEEcCCCCEEEeCCCCEEEEEEEeeecCCeEEEEECCCCccccceeecccCcccceEEecccccccceEEEECCCC
Confidence 468999999999999999999999999999999999999776442210 111111111112234589999999
Q ss_pred CCCCeEEEEEEEcCCCce
Q psy7036 78 ETDAGLYKVKAKNKMGEV 95 (254)
Q Consensus 78 ~~d~G~Y~C~~~~~~~~~ 95 (254)
..|+|.|+|.+.|..|..
T Consensus 99 ~~D~G~Y~C~a~N~~G~~ 116 (137)
T 3qr2_A 99 EEDTGTYECRASNDPDRN 116 (137)
T ss_dssp GGGCEEEEEEEECCTTSS
T ss_pred cccCEEEEEEEEecCCcc
Confidence 999999999999998875
No 393
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.59 E-value=7e-15 Score=90.35 Aligned_cols=82 Identities=22% Similarity=0.351 Sum_probs=67.4
Q ss_pred eCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEEEEEcCC
Q psy7036 13 QKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKVKAKNKM 92 (254)
Q Consensus 13 ~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~ 92 (254)
..|....+.+|+++.|.|.+.+ .+.+.|+|+|..+....+.... .+ .|.|.+++..|+|.|+|.+.|..
T Consensus 6 ~~p~~~~v~~G~~~~l~C~~~~--~p~v~W~k~g~~~~~~~~~~~~---~~------~L~i~~~~~~D~G~Y~C~a~n~~ 74 (95)
T 4hwu_A 6 SQPEAYVVAPGESLELQCMLKD--AAVISWTKDGVHLGPNNRTVLI---GE------YLQIKGATPRDSGLYACTAARTV 74 (95)
T ss_dssp --CEEEEECTTSCEEEECCCCT--TCEEEEEETTEEECCCSSEEEE---TT------EEEECSCCGGGCEEEEEEEECSS
T ss_pred cCCCcEEECCCCEEEEEEEeCC--CCEEEEEECCEECCCCceEEEe---CC------EEEECcCCcccCEEEEEEEccCC
Confidence 4667778999999999999985 5789999999998766554432 11 79999999999999999999999
Q ss_pred CceEEEEEEEEec
Q psy7036 93 GEVAASINLNFSR 105 (254)
Q Consensus 93 ~~~~~~~~l~v~~ 105 (254)
|.....+.|.|.+
T Consensus 75 g~~~~~~~l~V~~ 87 (95)
T 4hwu_A 75 DSETWIFMVNVTD 87 (95)
T ss_dssp CEEEEEEEEEECC
T ss_pred CcEEEEEEEEEeC
Confidence 9888888888863
No 394
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.59 E-value=1.7e-15 Score=93.81 Aligned_cols=83 Identities=27% Similarity=0.452 Sum_probs=67.6
Q ss_pred eCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEEEEEcCC
Q psy7036 13 QKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKVKAKNKM 92 (254)
Q Consensus 13 ~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~ 92 (254)
..|....+.+|+.++|.|.+.+.| +.+.|+|++..+....+..+. +. .|.|.+++..|+|.|+|.+.|..
T Consensus 8 ~~p~~~~v~~G~~v~L~C~~~g~p-p~i~W~k~g~~~~~~~~~~~~----~~-----~L~i~~v~~~D~G~Y~C~a~n~~ 77 (99)
T 2cr3_A 8 VEVESFLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLAESNRTRIT----GE-----EVEVQDSVPADSGLYACVTSSPS 77 (99)
T ss_dssp CCEEECCBCTTSCEEEECCCCSSC-CEEEEEESSSBCCCCSSEEEC----SS-----EEEETTCCTTTCEEEEEEEEETT
T ss_pred CCCcCeEEeCCCcEEEEEEecCCC-CeEEEEECCEECCCCCcEEEE----CC-----EEEEccCCHHHCEEEEEEEEeCC
Confidence 356667789999999999998876 699999999887655443332 11 79999999999999999999999
Q ss_pred CceEEEEEEEEec
Q psy7036 93 GEVAASINLNFSR 105 (254)
Q Consensus 93 ~~~~~~~~l~v~~ 105 (254)
|.....+.|.|..
T Consensus 78 g~~~~~~~l~V~~ 90 (99)
T 2cr3_A 78 GSDTTYFSVNVSD 90 (99)
T ss_dssp EEEEEEEEECBCS
T ss_pred ceEEEEEEEEEec
Confidence 8887788777753
No 395
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.58 E-value=1.6e-14 Score=102.30 Aligned_cols=123 Identities=18% Similarity=0.204 Sum_probs=83.3
Q ss_pred eeeecCCCeEEEEEEEeeCCCCeEEEEEC--CEecc---c-C------CcceEEEcCCCCceeeEEEEccCCCCCceeEE
Q psy7036 121 IRQEDDGKRLLFECRIQADPAPTVIWSHS--GVQVK---E-D------KRHKFSIDKDGHSYFASLEIIDVTIEDAGKYK 188 (254)
Q Consensus 121 ~~~~~~g~~~~l~C~~~~~~~~~~~W~~~--~~~~~---~-~------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~ 188 (254)
.+.+.+|+.+.|.|.+. +.+.+.|+|+ +.... . . ...++...... ....|.|.+++.+|+|.|+
T Consensus 9 ~~~v~~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~L~I~~v~~~D~G~Y~ 84 (211)
T 3tv3_L 9 SASGSPGQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSG--NTASLTVSGLQTDDEAVYY 84 (211)
T ss_dssp EEEECTTCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEET--TEEEEEEESCCGGGCEEEE
T ss_pred eEEEcCCCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccC--CEEEEEECCCChhHCEEEE
Confidence 67788999999999987 7889999994 22110 0 0 01111111111 1247999999999999999
Q ss_pred EEEEcCCC--cceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEeccC--CCceeC
Q psy7036 189 VTAKNELG--ESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEP--EPTISW 254 (254)
Q Consensus 189 C~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p--~p~~~W 254 (254)
|.+.|..+ .......|.|... ...+|.+...+....+..|+ .+.|.|.+.|.+ .+.++|
T Consensus 85 C~~~~~~~~~~~~~~~~l~V~~~------~~~~P~v~~~~~~~~~~~g~-~v~l~C~~~g~~p~~~~v~W 147 (211)
T 3tv3_L 85 CGSLVGNWDVIFGGGTKLTVLGQ------PKAAPSVTLFPPSSEELQAN-KATLVCLISDFYPGAVTVAW 147 (211)
T ss_dssp EEEEETTTEEEECCCEEEEECCS------CCBCCEEEEECCCHHHHHTT-CEEEEEEEEEEBSSCCEEEE
T ss_pred EEEecCCCceeECCCceEEEeCC------CCcCCeeEecCCchhhhcCC-CeEEEEEeeeecCCCeEEEE
Confidence 99999877 3444556666531 12366676666555555788 999999999863 467888
No 396
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.58 E-value=4.8e-14 Score=90.22 Aligned_cols=81 Identities=28% Similarity=0.412 Sum_probs=65.3
Q ss_pred CeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEe
Q psy7036 128 KRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFD 207 (254)
Q Consensus 128 ~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~ 207 (254)
....|.|.+.|.|.+.+.|+|++..+............++......|.|.++..+|+|.|+|.|.|..|....++.+.|.
T Consensus 21 ~~~~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~ 100 (118)
T 1wwc_A 21 LEHCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEISEGCLLFNKPTHYNNGNYTLIAKNPLGTANQTINGHFL 100 (118)
T ss_dssp CEEEEEEEEECSSCCEEEEEETTEECCCSSSEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEEETTEEEEEEEEECCS
T ss_pred cceEEEEEeeeeCCCeEEEEECCEECCCCCceeEEEeccCccccEEEEECCCChhcCEEEEEEEECCCCeEeeEEEEEEc
Confidence 56788999999999999999999998766554444333332334589999999999999999999999998888887665
Q ss_pred c
Q psy7036 208 S 208 (254)
Q Consensus 208 ~ 208 (254)
.
T Consensus 101 ~ 101 (118)
T 1wwc_A 101 K 101 (118)
T ss_dssp C
T ss_pred c
Confidence 4
No 397
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.58 E-value=8.3e-15 Score=107.75 Aligned_cols=160 Identities=17% Similarity=0.240 Sum_probs=81.0
Q ss_pred cCCCCCeEEEEEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECC--Eec
Q psy7036 76 VIETDAGLYKVKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSG--VQV 153 (254)
Q Consensus 76 ~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~--~~~ 153 (254)
.++.|.+.|.|.+.+..|.......+.| ...+..+.+.+|+.++|.|.+.+ +.+.+.|+|.. ...
T Consensus 3 ~~~~~~~~y~~~~~~~~g~~~~~~~~~v------------~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~ 69 (270)
T 3qib_D 3 NERADLIAYLKQATKGGGGSGGGGGMKV------------IQTPRYLVKGQGQKAKMRCIPEK-GHPVVFWYQQNKNNEF 69 (270)
T ss_dssp -------------------------CCC------------EEECSEEEEETTSCEEEEEECCT-TCCEEEEEEECTTCCE
T ss_pred chhhhHHHHHHHHhccCCccccccceeE------------EeCCCeEEEcCCCCEEEEEEecC-CCceEEEEEECCCCCc
Confidence 3578899999999887765443333333 22345567889999999999754 66789999832 110
Q ss_pred ----ccCCc---------c-eEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCC----cceEEEEEEEecCCCCCCC
Q psy7036 154 ----KEDKR---------H-KFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELG----ESNATISLNFDSDDAPVPG 215 (254)
Q Consensus 154 ----~~~~~---------~-~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~----~~~~~~~~~v~~~~~~~~~ 215 (254)
..... . ++..... .....+|.|.+++.+|+|.|.|.+.+... .......+.|......
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~--- 145 (270)
T 3qib_D 70 KFLINFQNQEVLQQIDMTEKRFSAECP-SNSPCSLEIQSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLEDLKN--- 145 (270)
T ss_dssp EEEEEEETTEEEEECHHHHHHEEEECC-TTSCEEEEESSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEESCSTT---
T ss_pred EEEEEECCCCceecCCccCCcEEEEeC-CCcEEEEEECCCCHhHCeEEEEEEecCCCccceEECCcEEEEEcccccc---
Confidence 00000 0 2222211 11224899999999999999999997432 2223345556532111
Q ss_pred CCCCCeeec-CCccccccCCCCcEEEEEEEec-cCCC-ceeC
Q psy7036 216 EGTKPVFTE-RPVTKQSDDDLNDIVIECRLVG-EPEP-TISW 254 (254)
Q Consensus 216 ~~~~p~~~~-~~~~~~~~~g~~~~~l~C~~~~-~p~p-~~~W 254 (254)
..+|.+.. .+....+..|+ .+.|.|.+.| .|.| .++|
T Consensus 146 -~~~P~v~~~~~~~~~~~~g~-~v~L~C~~~g~~P~~~~v~W 185 (270)
T 3qib_D 146 -VFPPEVAVFEPSEAEISHTQ-KATLVCLATGFYPDHVELSW 185 (270)
T ss_dssp -CBCCEEEEEECCHHHHHHHS-EEEEEEEEEEEBSSCEEEEE
T ss_pred -ccCCceEEECCCccccccCC-ceEEEEEecceeCCCeEEEE
Confidence 12444433 33443455688 9999999998 5767 6888
No 398
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.58 E-value=5.8e-15 Score=91.29 Aligned_cols=87 Identities=21% Similarity=0.294 Sum_probs=66.4
Q ss_pred CCeeE-eCCCceeecCCCeEEEEEEEe-eCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEE
Q psy7036 8 APSFT-QKPQLRQEDEGNRLIFECQLL-CNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYK 85 (254)
Q Consensus 8 ~p~~~-~~~~~~~v~~g~~v~l~C~~~-~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 85 (254)
+|.+. ..+....+.+|++++|.|.+. +.|.+.+.|+|++....... .. ...+ .|.|.+++.+|+|.|+
T Consensus 9 ~~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~~~~~~~~~--~~--~~~~------~L~i~~v~~~D~G~Y~ 78 (98)
T 1gl4_B 9 PIMVTVEEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPSR--AM--DFNG------ILTIRNVQPSDAGTYV 78 (98)
T ss_dssp CEEEEECSCCEEEECTTCCEEEEEEEEESSSCCEEEEEEGGGBCCCTT--EE--EETT------EEEECSCCGGGCEEEE
T ss_pred CcEEEEeCCCCeEEecCCCEEEEEeCCCCCCCcEEEEEeCCCCCCCce--ee--cCCC------EEEEeCCChhhCEEEE
Confidence 34444 455777899999999999998 58899999999754332221 11 1111 7999999999999999
Q ss_pred EEEEcCCCceEEEEEEEEe
Q psy7036 86 VKAKNKMGEVAASINLNFS 104 (254)
Q Consensus 86 C~~~~~~~~~~~~~~l~v~ 104 (254)
|.+.|..|.....+.|.|.
T Consensus 79 C~a~n~~g~~~~~~~l~V~ 97 (98)
T 1gl4_B 79 CTGSNMFAMDQGTATLHVQ 97 (98)
T ss_dssp EEEECSSCEEEEEEEEEEC
T ss_pred EEecCCCCccccEEEEEEe
Confidence 9999999988888887764
No 399
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.58 E-value=2.1e-14 Score=101.55 Aligned_cols=126 Identities=17% Similarity=0.256 Sum_probs=83.4
Q ss_pred CCeeeecCCCeEEEEEEEeeCCCCeEEEEECC--Eec----------ccCCcceEEEcCCCCceeeEEEEccCCCCCcee
Q psy7036 119 PSIRQEDDGKRLLFECRIQADPAPTVIWSHSG--VQV----------KEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGK 186 (254)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~--~~~----------~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 186 (254)
+....+.+|+.+.|.|.+.+.+.+.+.|+|+. ..+ ......++.....+ ....|.|.+++.+|+|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~L~I~~v~~~D~G~ 84 (210)
T 1lk3_L 7 PPALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSG--TDFTLTIDPVEADDTAI 84 (210)
T ss_dssp CSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET--TEEEEEESSCCGGGCEE
T ss_pred CCcEEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecC--CEEEEEECCCCHHHCeE
Confidence 55677889999999999999888899999852 211 00001122211111 12379999999999999
Q ss_pred EEEEEEcCCCcc-eEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEecc-CCC-ceeC
Q psy7036 187 YKVTAKNELGES-NATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGE-PEP-TISW 254 (254)
Q Consensus 187 y~C~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~-p~p-~~~W 254 (254)
|+|.+.|..+.. .....+.|... ..+|.+...+....+..|+ .+.|.|.+.|. |.+ .++|
T Consensus 85 Y~C~~~~~~~~~~~~~~~l~V~~~-------~~~P~v~~~~~~~~~~~g~-~v~l~C~~~g~~p~~~~v~W 147 (210)
T 1lk3_L 85 YFCQQSWNGPLTFGAGTKLELKRA-------DAAPTVSIFPPSTEQLATG-GASVVCLMNNFYPRDISVKW 147 (210)
T ss_dssp EEEEECSSSSCEECCCEEEEECCC-------CBCCEEEEECCCHHHHTTT-EEEEEEEEEEEBSSCCEEEE
T ss_pred EEEEEEcCCCceeCCCEEEEEcCC-------CcCCeEEEECCchhhccCC-cEEEEEEEEeEeCCceEEEE
Confidence 999999876643 22335555431 1245565544333445788 99999999984 554 7888
No 400
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.58 E-value=1.5e-14 Score=90.25 Aligned_cols=90 Identities=19% Similarity=0.347 Sum_probs=72.1
Q ss_pred CCCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEE
Q psy7036 6 DFAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYK 85 (254)
Q Consensus 6 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 85 (254)
..+|.|...+....+.+|++++|.|.+ +.|.+.+.|+|++..+....++.+.. .+ ....|.|.+++..|+|.|+
T Consensus 6 ~~pp~~~~~~~~~~v~~G~~v~l~C~~-~~p~~~v~W~k~~~~l~~~~~~~~~~--~~---~~~~L~I~~v~~~D~G~Y~ 79 (103)
T 2dku_A 6 SGANCFTEELTNLQVEEKGTAVFTCKT-EHPAATVTWRKGLLELRASGKHQPSQ--EG---LTLRLTISALEKADSDTYT 79 (103)
T ss_dssp CCCCCCSSCCCCEEEETTSEEEEEEEC-SSCCSCCEEEESSCBCCSSSSEEEEE--ET---TEEEEEEESCCTTTCSEEE
T ss_pred CCCCEeEecCCcEEEeCCCcEEEEEEe-CCCCCeEEEEeCCEECCCCCeEEEEe--CC---CEEEEEECCCCcccCEEEE
Confidence 357889989999999999999999995 78888999999999887766655432 11 2337999999999999999
Q ss_pred EEEEcCCCceEEEEEEEEec
Q psy7036 86 VKAKNKMGEVAASINLNFSR 105 (254)
Q Consensus 86 C~~~~~~~~~~~~~~l~v~~ 105 (254)
|. .+.....+.|.|..
T Consensus 80 C~----~g~~~~~~~l~V~~ 95 (103)
T 2dku_A 80 CD----IGQAQSRAQLLVQG 95 (103)
T ss_dssp EE----CSSCBCCEEEEEEC
T ss_pred EE----eCCceEEEEEEEeC
Confidence 98 45555667788764
No 401
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.58 E-value=3.6e-14 Score=101.27 Aligned_cols=127 Identities=16% Similarity=0.277 Sum_probs=81.7
Q ss_pred eeeecCCCeEEEEEEEeeCC--CCeEEEEECC--Ee---cc----c----------CCcceEEEcCCCCceeeEEEEccC
Q psy7036 121 IRQEDDGKRLLFECRIQADP--APTVIWSHSG--VQ---VK----E----------DKRHKFSIDKDGHSYFASLEIIDV 179 (254)
Q Consensus 121 ~~~~~~g~~~~l~C~~~~~~--~~~~~W~~~~--~~---~~----~----------~~~~~~~~~~~~~~~~~~l~i~~~ 179 (254)
...+..|+.+.|.|.+.+.+ .+.+.|+|+. .. +. . ....++....+.......|.|.++
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 88 (222)
T 1q9r_B 9 GGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMNTL 88 (222)
T ss_dssp CCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEECSC
T ss_pred ceeEcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEECcC
Confidence 34677899999999998765 6789999853 11 10 0 001122222111111348999999
Q ss_pred CCCCceeEEEEEEcCCC-----cceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEecc-CCC-ce
Q psy7036 180 TIEDAGKYKVTAKNELG-----ESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGE-PEP-TI 252 (254)
Q Consensus 180 ~~~d~G~y~C~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~-p~p-~~ 252 (254)
+.+|+|.|.|.+.+..+ .......+.|.... ..+|.+...+....+.+|+ .+.|.|.+.|. |.| .+
T Consensus 89 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~------~~~P~i~~~~~~~~~~~g~-~v~L~C~~~g~~P~p~~v 161 (222)
T 1q9r_B 89 RAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAK------TTPPSVYPLAPGSAAQTNS-MVTLGCLVKGYFPEPVTV 161 (222)
T ss_dssp CGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSC------CBCCEEEEECCCSCCCCSS-EEEEEEEEEEEBSSCCEE
T ss_pred CcccCeEEEEEEeccCCcccceEeCCceEEEeccCC------CCCCeEEEccccccccCCC-cEEEEEEEccEECCCCEE
Confidence 99999999999998754 22233456665311 1245554433333456788 99999999986 888 89
Q ss_pred eC
Q psy7036 253 SW 254 (254)
Q Consensus 253 ~W 254 (254)
+|
T Consensus 162 ~W 163 (222)
T 1q9r_B 162 TW 163 (222)
T ss_dssp EE
T ss_pred EE
Confidence 98
No 402
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.58 E-value=1.7e-14 Score=101.34 Aligned_cols=128 Identities=12% Similarity=0.142 Sum_probs=85.0
Q ss_pred CCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEE
Q psy7036 112 APTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTA 191 (254)
Q Consensus 112 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~ 191 (254)
+|.+...+. ..+.+|+.++|.|.+. .+.+.+.|+|++..+........ .. .......|.|.+++.+|+|.|+|.+
T Consensus 8 ~P~i~~~p~-~~v~~G~~v~L~C~~~-~~~~~~~w~k~g~~~~~~~~~~~-~~--~~~~~~~l~I~~v~~~D~G~Y~C~a 82 (201)
T 1nkr_A 8 KPSLLAHPG-PLVKSEETVILQCWSD-VMFEHFLLHREGMFNDTLRLIGE-HH--DGVSKANFSISRMTQDLAGTYRCYG 82 (201)
T ss_dssp CCEEEEESC-SEEETTCCEEEEEEES-SCCSEEEEEEESSSCEEEEEECE-EE--TTEEEEEEEESSCCGGGCEEEEEEE
T ss_pred CCeEEEEcC-CccCCCCcEEEEEecc-CCCCEEEEEECCCcCCcceeeee-cC--CCCceEEEEeccCCcccCeEEEEeE
Confidence 344443333 4577899999999986 46779999999875532110000 00 0111237999999999999999999
Q ss_pred EcCCC-----cceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEeccCCCceeC
Q psy7036 192 KNELG-----ESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEPEPTISW 254 (254)
Q Consensus 192 ~~~~~-----~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p~p~~~W 254 (254)
.+... ..+..+.|.|... ..+|.+...|. ..+.+|+ .++|.|.+.+ |.+.+.|
T Consensus 83 ~~~~~~~~~~~~s~~~~l~V~~~-------~~~p~i~~~p~-~~v~~G~-~v~L~C~~~~-~~~~~~w 140 (201)
T 1nkr_A 83 SVTHSPYQVSAPSDPLDIVIIGL-------YEKPSLSAQPG-PTVLAGE-NVTLSCSSRS-SYDMYHL 140 (201)
T ss_dssp EBTTBTTCCCCCCCCEEEEEECS-------SCCCEEEEESC-SEECTTC-EEEEEEEESS-CCSEEEE
T ss_pred ecCCCCccccCCCCCEEEEeecc-------CCCCceecCCC-CccCCCC-eEEEEEeCCC-CCceEEE
Confidence 87531 2244556666541 12566766555 3678899 9999999986 4567777
No 403
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.58 E-value=8.2e-16 Score=117.23 Aligned_cols=144 Identities=14% Similarity=0.240 Sum_probs=102.1
Q ss_pred CCeEEEEEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcc
Q psy7036 80 DAGLYKVKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRH 159 (254)
Q Consensus 80 d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~ 159 (254)
+.|.|+|.+.+.... +.+ ....+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+......
T Consensus 136 ~~~~~~C~~~~~l~~----l~~------~~c~~P~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~~ 205 (347)
T 2ifg_A 136 PEQKLQCHGQGPLAH----MPN------ASCGVPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMK 205 (347)
T ss_dssp GGGCCCCSSSSCSSC----CCC------TTCCCCEEEEECCSSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEECC
T ss_pred cccCCCCCCChHHhc----CCc------ccCCCCceeccCCceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeeccccc
Confidence 457888876542111 111 1113555555556667889999999999999999999999988664322111
Q ss_pred eEEEcCCCCceeeEEEEccCCCCCce-eEEEEEEcCCCcceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcE
Q psy7036 160 KFSIDKDGHSYFASLEIIDVTIEDAG-KYKVTAKNELGESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDI 238 (254)
Q Consensus 160 ~~~~~~~~~~~~~~l~i~~~~~~d~G-~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~ 238 (254)
........|.|.+++.+|.| .|+|.|.|..|.....+.+.|.. +|.+ ....+.+|+ .+
T Consensus 206 ------~~~~~~~~L~i~~v~~~D~G~~Y~C~a~n~~g~~~~~~~l~V~~----------~P~i----~~~~~~~g~-~v 264 (347)
T 2ifg_A 206 ------SGGLPSLGLTLANVTSDLNRKNVTCWAENDVGRAEVSVQVNVSF----------PASV----QLHTAVEMH-HW 264 (347)
T ss_dssp ------CCCSSEEEEEEESCCSTTTTCCEEECCEETTEECCEEECCCCBE----------EEEE----EECCCEESS-SE
T ss_pred ------ceecccceEEEeeCChHHCCCeEEEEEEcCCCCEEEEEEEEEcC----------CCee----eeccCccCc-eE
Confidence 11122348999999999999 99999999998887777766653 4443 112345677 99
Q ss_pred EEEEEEeccCCCceeC
Q psy7036 239 VIECRLVGEPEPTISW 254 (254)
Q Consensus 239 ~l~C~~~~~p~p~~~W 254 (254)
.|.|.+.|.|.|.++|
T Consensus 265 ~l~C~~~g~P~p~i~W 280 (347)
T 2ifg_A 265 CIPFSVDGQPAPSLRW 280 (347)
T ss_dssp EEEEEEEEESCCEEEE
T ss_pred EEEEEeeecCCCcEEE
Confidence 9999999999999999
No 404
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.58 E-value=2.2e-14 Score=102.00 Aligned_cols=125 Identities=16% Similarity=0.261 Sum_probs=83.7
Q ss_pred eeeecCCCeEEEEEEEeeC-CCCeEEEEECC--Ee---c-ccCC----------cceEEEcCCCCceeeEEEEccCCCCC
Q psy7036 121 IRQEDDGKRLLFECRIQAD-PAPTVIWSHSG--VQ---V-KEDK----------RHKFSIDKDGHSYFASLEIIDVTIED 183 (254)
Q Consensus 121 ~~~~~~g~~~~l~C~~~~~-~~~~~~W~~~~--~~---~-~~~~----------~~~~~~~~~~~~~~~~l~i~~~~~~d 183 (254)
.+.+.+|+.+.|.|.+.+. +.+.+.|+|.. .. + .... ..++..... .....|.|.+++.+|
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~--~~~~~L~I~~v~~~D 86 (218)
T 3s96_B 9 SASFSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSS--GADRYLSISNIQPED 86 (218)
T ss_dssp EEEEETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEE--TTEEEEEESSCCGGG
T ss_pred cEEECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecC--CceEEEEEccCCccc
Confidence 6678899999999999988 88899999832 10 0 0000 011111111 112479999999999
Q ss_pred ceeEEEEEEcCCC-----cceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEec-cCCC-ceeC
Q psy7036 184 AGKYKVTAKNELG-----ESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVG-EPEP-TISW 254 (254)
Q Consensus 184 ~G~y~C~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~-~p~p-~~~W 254 (254)
+|.|+|.+.|..+ .......|.|.... ..+|.+...+....+..++ .+.|.|.+.| .|.| .++|
T Consensus 87 ~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~------~~~P~~~~~~~~~~~~~~~-~v~L~C~~~g~~p~~~~v~W 157 (218)
T 3s96_B 87 EAIYICGVGDTIKEQFVYVFGGGTKVTVLGQP------KSTPTLTVFPPSSEELKEN-KATLVCLISNFSPSGVTVAW 157 (218)
T ss_dssp CEEEEEEEEEEETTEEEEEECCCEEEEEESCC------CBCCEEEEECCCHHHHHTT-EEEEEEEEEEEBSSCCEEEE
T ss_pred CEEEEEEEecCCCCceeEEEcCcEEEEEecCC------CCCceEEeeCCCcccccCC-cEEEEEEECcccCCCeEEEE
Confidence 9999999999876 22334556665321 1356666544444556677 9999999998 5767 7888
No 405
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.58 E-value=3.7e-14 Score=90.76 Aligned_cols=84 Identities=19% Similarity=0.320 Sum_probs=68.4
Q ss_pred CeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcce
Q psy7036 120 SIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESN 199 (254)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~ 199 (254)
....+..|+.+.|.|.+.+.|.+.+.|++++..+. .....+..... .+.|.|.++..+|+|.|+|.|.|..|...
T Consensus 32 ~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~-~~~~~~~~~~~----~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~ 106 (118)
T 2e7c_A 32 QTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLD-TSRVHVRTSDF----DTVFFVRQAARSDSGEYELSVQIENMKDT 106 (118)
T ss_dssp SCEEEESSSCEEEEEEEEEESCCEEEEEETTEECC-CSSCEEEECSS----EEEEEESSCCTTTCEEEEEEEECSSCEEC
T ss_pred CCEEEECCCEEEEEEEEccCCCCEEEEEECCEECC-CCcEEEEECCC----eEEEEECCCChhcCEEEEEEEEeCCCeEE
Confidence 45678889999999999999999999999999886 23333332221 23699999999999999999999999888
Q ss_pred EEEEEEEec
Q psy7036 200 ATISLNFDS 208 (254)
Q Consensus 200 ~~~~~~v~~ 208 (254)
..+.|.|..
T Consensus 107 ~~~~l~V~~ 115 (118)
T 2e7c_A 107 ATIRIRVVE 115 (118)
T ss_dssp CEEEEEEEC
T ss_pred EEEEEEEEc
Confidence 888888764
No 406
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.58 E-value=1.9e-14 Score=101.77 Aligned_cols=126 Identities=17% Similarity=0.280 Sum_probs=81.4
Q ss_pred eeeecCCCeEEEEEEEeeCC--CCeEEEEECC--Eecc----c----------CCcceEEEcCCCCceeeEEEEccCCCC
Q psy7036 121 IRQEDDGKRLLFECRIQADP--APTVIWSHSG--VQVK----E----------DKRHKFSIDKDGHSYFASLEIIDVTIE 182 (254)
Q Consensus 121 ~~~~~~g~~~~l~C~~~~~~--~~~~~W~~~~--~~~~----~----------~~~~~~~~~~~~~~~~~~l~i~~~~~~ 182 (254)
...+..|+.+.|.|.+.+.+ .+.+.|+|+. .... . ....++....+.......|.|.+++.+
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~ 88 (210)
T 3d9a_H 9 PSLVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTE 88 (210)
T ss_dssp CSEECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGG
T ss_pred CEEecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCCCcc
Confidence 34677899999999998875 3789999852 2110 0 001122221111111248999999999
Q ss_pred CceeEEEEEEcCCCcceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEecc-CCC-ceeC
Q psy7036 183 DAGKYKVTAKNELGESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGE-PEP-TISW 254 (254)
Q Consensus 183 d~G~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~-p~p-~~~W 254 (254)
|+|.|.|.+.|.. .......+.|... ...+|.+...+....+.+|+ .+.|.|.+.|. |.| .++|
T Consensus 89 D~G~Y~C~~~~~~-~~~~~~~l~V~~~------~~~~P~v~~~~~~~~~~~g~-~v~L~C~~~g~~P~p~~v~W 154 (210)
T 3d9a_H 89 DTATYYCANWDGD-YWGQGTLVTVSAA------KTTPPSVYPLAPGSAAQTNS-MVTLGCLVKGYFPEPVTVTW 154 (210)
T ss_dssp GCEEEEEEETTSS-CBCCCEEEEECCC------CCBCCEEEEECCTTSCCCSS-EEEEEEEEEEEBSSCCEEEE
T ss_pred cCEEEEEEEecCc-ccccceEEEeccC------CCCCCEEEEecCCcccccCC-cEEEEEEEeeEecCCcEEEE
Confidence 9999999999864 2222345555531 12245555444334567888 99999999987 888 8998
No 407
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.58 E-value=2.5e-14 Score=103.30 Aligned_cols=130 Identities=15% Similarity=0.154 Sum_probs=85.6
Q ss_pred CCCeeeecCCCeEEEEEEEeeCC----CCeEEEEECC--Eec---cc-------CCcceEEEcCCCCceeeEEEEccCCC
Q psy7036 118 KPSIRQEDDGKRLLFECRIQADP----APTVIWSHSG--VQV---KE-------DKRHKFSIDKDGHSYFASLEIIDVTI 181 (254)
Q Consensus 118 ~~~~~~~~~g~~~~l~C~~~~~~----~~~~~W~~~~--~~~---~~-------~~~~~~~~~~~~~~~~~~l~i~~~~~ 181 (254)
.+....+.+|+.+.|.|.+.+.+ .+.+.|+|+. ..+ .. ....++.....+ ....|.|.+++.
T Consensus 7 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~L~I~~v~~ 84 (240)
T 1moe_A 7 SPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSR--TDFTLIIDPVEA 84 (240)
T ss_dssp ECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET--TEEEEEESSCCG
T ss_pred eCCeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecC--CeEEEEEcCCCh
Confidence 34566788999999999998887 6789999952 111 00 001112211111 123799999999
Q ss_pred CCceeEEEEEEcCCCc-ceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEeccCC--CceeC
Q psy7036 182 EDAGKYKVTAKNELGE-SNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEPE--PTISW 254 (254)
Q Consensus 182 ~d~G~y~C~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p~--p~~~W 254 (254)
+|+|.|+|.+.|..+. ......|.|....... .++.+...+....+.+|+ .+.|.|.+.+.|. +.+.|
T Consensus 85 ~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~----~~~~~~~~~~~~~v~~G~-~v~L~C~~~g~p~~~~~v~W 155 (240)
T 1moe_A 85 DDVATYYCQQTNEDPYTFGGGTKLEIKGGGSGG----GGEVQLQQSGAELVEPGA-SVKLSCTASGFNIKDTYMHW 155 (240)
T ss_dssp GGCEEEEEEECSSSSCCBCCCEEEEECCCSCCC----CCCCEEEECCCEEECTTC-CEEEEEEEESSCGGGSCEEE
T ss_pred hhCEEEEEEEccCCceeecCCEEEEEecCCCCC----CceEEEeCCCceEEeCCC-cEEEEEEEcCccCCCCEEEE
Confidence 9999999999998654 3344556665422100 122233345556788899 9999999999874 57888
No 408
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.57 E-value=1.9e-14 Score=100.41 Aligned_cols=121 Identities=12% Similarity=0.283 Sum_probs=82.0
Q ss_pred CCeeeecCCCeEEEEEEEee-CCCCeEEEEECCEecc---cCCc-------------ceEEEcCCCCceeeEEEEccCCC
Q psy7036 119 PSIRQEDDGKRLLFECRIQA-DPAPTVIWSHSGVQVK---EDKR-------------HKFSIDKDGHSYFASLEIIDVTI 181 (254)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~-~~~~~~~W~~~~~~~~---~~~~-------------~~~~~~~~~~~~~~~l~i~~~~~ 181 (254)
+..+.+..|+.++|.|.+.+ .+.+.+.|++++..+. .... .++....+ .+|.|.+++.
T Consensus 5 p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~~~-----~sL~I~~v~~ 79 (193)
T 2if7_A 5 PLMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQS-----YSLQLSNLKM 79 (193)
T ss_dssp CEEEEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEECTT-----CCEEECSCCG
T ss_pred CeEEEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEECCC-----eEEEECCCCc
Confidence 34567788999999999865 4456899999876542 1000 12222222 2799999999
Q ss_pred CCceeEEEEEEcCCCcceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCC-CcEEEEEEEecc-CCCceeC
Q psy7036 182 EDAGKYKVTAKNELGESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDL-NDIVIECRLVGE-PEPTISW 254 (254)
Q Consensus 182 ~d~G~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~-~~~~l~C~~~~~-p~p~~~W 254 (254)
+|+|.|+|.+.+..+.....+.|.|... +..|.+...+. ..+++ ..+.|.|.+.|. |.|.++|
T Consensus 80 ~D~G~Y~C~~~~~~~~~~~~~~L~V~~~-------~~~p~i~~~~~---~~~~g~~~v~L~C~~~g~~p~p~i~W 144 (193)
T 2if7_A 80 EDTGSYRAQISTKTSAKLSSYTLRILRQ-------LRNIQVTNHSQ---LFQNMTCELHLTCSVEDADDNVSFRW 144 (193)
T ss_dssp GGCEEEEEEEECSSCEEEEEEEEEEECC-------CEEEEEEECCC------CSSEEEEEEEEEESCCTTCEEEE
T ss_pred ccCceEEEEEEecCCCeEEEEEEEEEcc-------CCCCeEecCce---eecCCCceEEEEEEEecCCCceEEEE
Confidence 9999999999998887666777777641 11244443331 22333 269999999985 5789998
No 409
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.57 E-value=1.8e-14 Score=105.07 Aligned_cols=124 Identities=15% Similarity=0.217 Sum_probs=84.7
Q ss_pred CeeeecCCCeEEEEEEEeeCC--CCeEEEEECC--Eecc----c-----------CCcceEEEcCCCCceeeEEEEccCC
Q psy7036 120 SIRQEDDGKRLLFECRIQADP--APTVIWSHSG--VQVK----E-----------DKRHKFSIDKDGHSYFASLEIIDVT 180 (254)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~~~--~~~~~W~~~~--~~~~----~-----------~~~~~~~~~~~~~~~~~~l~i~~~~ 180 (254)
....+.+|+.++|.|.+.+.+ .+.+.|+|+. ..+. . ....++....+.......|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 87 (256)
T 1nqb_A 8 GAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSSLT 87 (256)
T ss_dssp CCEEECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCeeecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEECcCC
Confidence 346788999999999998875 5789999842 2110 0 0011222221111112479999999
Q ss_pred CCCceeEEEEEEcCCCc-----ceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEeccCCC-----
Q psy7036 181 IEDAGKYKVTAKNELGE-----SNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEPEP----- 250 (254)
Q Consensus 181 ~~d~G~y~C~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p~p----- 250 (254)
.+|+|.|.|.+.|..+. ......|.|.. +|.+...|....+.+|+ .++|.|.+.+.|.+
T Consensus 88 ~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~----------~~~v~~~p~~~~v~~G~-~v~L~C~~~~~~~~~~~~~ 156 (256)
T 1nqb_A 88 SEDSAVYYCARYDYYGSSYFDYWGQGTTVTVSS----------DIELTQTPLSLPVSLGD-QASISCRSSQSIVHSNGNT 156 (256)
T ss_dssp GGGCEEEEEEECCTTSSSSCSEECCCEEEEECC----------CCCEEEECSEEEECTTC-CEEEEEEESSCCBCTTSCB
T ss_pred hhhCEEEEEEEeeccCccceeEEcCceeeeecc----------cccEEecCcEEEEecCC-cEEEEeEecCcccccccce
Confidence 99999999999998652 12335566653 34455566667788999 99999999998775
Q ss_pred ceeC
Q psy7036 251 TISW 254 (254)
Q Consensus 251 ~~~W 254 (254)
.+.|
T Consensus 157 ~v~W 160 (256)
T 1nqb_A 157 YLEW 160 (256)
T ss_dssp CEEE
T ss_pred EEEE
Confidence 8888
No 410
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.57 E-value=2.5e-14 Score=85.25 Aligned_cols=79 Identities=16% Similarity=0.291 Sum_probs=62.5
Q ss_pred CeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcce
Q psy7036 120 SIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESN 199 (254)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~ 199 (254)
..+.+.+|+.+.|.|.+.+ |.+.+.|+|+|..+.......+...... ..|.|.+++.+|+|.|+|.| ++..
T Consensus 4 t~v~~~~G~~v~l~C~vs~-p~p~v~W~k~g~~l~~~~~~~~~~~~~~----~~L~I~~~~~~D~G~Y~C~a----~n~~ 74 (84)
T 2lu7_A 4 TRVRSTPGGDLELVVHLSG-PGGPVRWYKDGERLASQGRVQLEQAGAR----QVLRVQGARSGDAGEYLCDA----PQDS 74 (84)
T ss_dssp CCEEECTTSCEEEECCCSC-CSTTCEEEETTEECCCCSSEEEEECSSC----EEEEESSCSSTTCEEEEEEC----TTTC
T ss_pred eEEEEecCCCEEEEEEECC-CCcEEEEEECCEEccccccEEEeecCCe----EEEEecCCCCcccEEEEEEE----CCEE
Confidence 4567889999999999855 8889999999999987766555443322 37999999999999999987 4456
Q ss_pred EEEEEEEe
Q psy7036 200 ATISLNFD 207 (254)
Q Consensus 200 ~~~~~~v~ 207 (254)
.++.|.|.
T Consensus 75 ~~a~l~V~ 82 (84)
T 2lu7_A 75 RIFLVSVE 82 (84)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEEE
Confidence 66777765
No 411
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.57 E-value=3e-14 Score=103.93 Aligned_cols=133 Identities=17% Similarity=0.272 Sum_probs=85.4
Q ss_pred eeeecCCCeEEEEEEEeeCC--CCeEEEEECC--Eecc---------------cCCcceEEEcCCCCceeeEEEEccCCC
Q psy7036 121 IRQEDDGKRLLFECRIQADP--APTVIWSHSG--VQVK---------------EDKRHKFSIDKDGHSYFASLEIIDVTI 181 (254)
Q Consensus 121 ~~~~~~g~~~~l~C~~~~~~--~~~~~W~~~~--~~~~---------------~~~~~~~~~~~~~~~~~~~l~i~~~~~ 181 (254)
...+.+|+.++|.|.+.+.+ .+.+.|+|.. ..+. .....++....+.......|.|.+++.
T Consensus 11 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 90 (256)
T 3umt_A 11 LELVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRSLTS 90 (256)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCCG
T ss_pred ceEEcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECCCCc
Confidence 35578899999999998865 6789999842 1100 000111222211111223699999999
Q ss_pred CCceeEEEEEEcC----CCcceEEEEEEEecCCCC------CCCCCCCCeeecCCccccccCCCCcEEEEEEEeccCCCc
Q psy7036 182 EDAGKYKVTAKNE----LGESNATISLNFDSDDAP------VPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEPEPT 251 (254)
Q Consensus 182 ~d~G~y~C~~~~~----~~~~~~~~~~~v~~~~~~------~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p~p~ 251 (254)
+|+|.|.|.+.|. .+.......|.|...... ......+|.+...|....+.+|+ .++|.|.+.+.|.+.
T Consensus 91 ~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~-~v~L~C~~~~~~~~~ 169 (256)
T 3umt_A 91 EDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSSLSASLGE-RVSITCRASQDIGSN 169 (256)
T ss_dssp GGCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEECSEEEECTTC-CEEEEEEESSCCTTC
T ss_pred ccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCCeEEEECCC-CEEEEEEEecCCCcE
Confidence 9999999999987 222334455666531000 00011255666677777888999 999999999998889
Q ss_pred eeC
Q psy7036 252 ISW 254 (254)
Q Consensus 252 ~~W 254 (254)
+.|
T Consensus 170 v~W 172 (256)
T 3umt_A 170 LNW 172 (256)
T ss_dssp EEE
T ss_pred EEE
Confidence 988
No 412
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.56 E-value=2.2e-14 Score=97.96 Aligned_cols=111 Identities=13% Similarity=0.257 Sum_probs=80.5
Q ss_pred ccCCCeeeecCCCeEEEEEEEeeCC-CCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcC
Q psy7036 116 LKKPSIRQEDDGKRLLFECRIQADP-APTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNE 194 (254)
Q Consensus 116 ~~~~~~~~~~~g~~~~l~C~~~~~~-~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~ 194 (254)
...+....+.+|+.+.|.|.+.+.| .+.+.|++++..+..... .+.|.+++.+|.|.|+|.+.|.
T Consensus 8 ~~~p~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~~~~--------------~~~~~~~~~~d~G~Y~C~~~~~ 73 (170)
T 3ry4_A 8 KLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTHTQ--------------PSYRFKANNNDSGEYTCQTGQT 73 (170)
T ss_dssp EEESCCSEEETTCEEEEEEESCCCSSSSCEEEEETTEECTTCCS--------------SEEEEECCGGGCEEEEEEETTS
T ss_pred EeCCCCeEEECCCcEEEEEEecCCCCcceEEEEECCeEcccCcc--------------ceEEEecccccCeEEEEEEeCC
Confidence 3344445677899999999998886 568999999988764321 4667789999999999999875
Q ss_pred CCcceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEe-ccCCCceeC
Q psy7036 195 LGESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLV-GEPEPTISW 254 (254)
Q Consensus 195 ~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~-~~p~p~~~W 254 (254)
.... .+.+.|.. ++.+...+ ...+.+|+ .+.|.|.+. +.|.+.+.|
T Consensus 74 ~~s~--~~~l~v~~----------~~~~~~~~-~~~~~~g~-~~~l~C~~~~~~p~~~~~W 120 (170)
T 3ry4_A 74 SLSD--PVHLTVLF----------EWLVLQTP-HLEFQEGE-TIMLRCHSWKDKPLVKVTF 120 (170)
T ss_dssp BCCC--CEEEEEEC----------CSEEEECS-CSEECTTC-CEEEEEEEGGGCCEEEEEE
T ss_pred CceE--eEEEEEEC----------CceEecCC-CceeecCC-eEEEEEECCCCCCCceEEE
Confidence 4433 45555653 23333333 34567888 999999995 456688888
No 413
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.56 E-value=9.7e-15 Score=90.45 Aligned_cols=89 Identities=24% Similarity=0.447 Sum_probs=69.7
Q ss_pred CCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEE
Q psy7036 111 LAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVT 190 (254)
Q Consensus 111 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~ 190 (254)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+..... ..... ...|.|.++..+|.|.|+|.
T Consensus 10 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~--~~~~~-----~~~L~i~~v~~~D~G~Y~C~ 82 (99)
T 2yr3_A 10 VAPSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYARS--TCEAG-----VAELHIQDALPEDHGTYTCL 82 (99)
T ss_dssp EEEEEEECCCCEEECTTCCEEEECEEEEESCCCCEEEESSSBCSSCCC--EEETT-----EEEEEECSCCTTCCBCEEEE
T ss_pred cCCceeecCCCCEEeCCCeEEEEEEEeeeCCCeEEEEECCEECcccce--EeeCC-----eEEEEECCCChhhCEEEEEE
Confidence 344555555667788999999999999999999999999987754332 11111 13799999999999999999
Q ss_pred EEcCCCcceEEEEEEE
Q psy7036 191 AKNELGESNATISLNF 206 (254)
Q Consensus 191 ~~~~~~~~~~~~~~~v 206 (254)
|.|..|....++.|.|
T Consensus 83 a~N~~g~~~~~~~l~V 98 (99)
T 2yr3_A 83 AENALGQVSCSAWVTV 98 (99)
T ss_dssp EECSSCEEEEECCEEE
T ss_pred EEECCCeEEEEEEEEE
Confidence 9999998877776665
No 414
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.56 E-value=6.2e-16 Score=99.72 Aligned_cols=97 Identities=20% Similarity=0.318 Sum_probs=73.5
Q ss_pred CCCccccCCCeeeecCCCeEEEEEEEeeCCCCe-EEEEECCEecccC--CcceEEEcCCCCceeeEEEEccCCCCCc-ee
Q psy7036 111 LAPTFLKKPSIRQEDDGKRLLFECRIQADPAPT-VIWSHSGVQVKED--KRHKFSIDKDGHSYFASLEIIDVTIEDA-GK 186 (254)
Q Consensus 111 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~-~~W~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~i~~~~~~d~-G~ 186 (254)
.+|.+.. +....+.+|+.+.|.|.+.+.|.|. +.|++++..+... .+..+..........+.|.|.++..+|. |.
T Consensus 13 ~~P~i~~-~~~~~~~~G~~v~l~C~~~g~P~p~~i~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~~G~ 91 (122)
T 2cry_A 13 GPPIISS-TQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETISTEEGVISTLTISNIVRADFQTI 91 (122)
T ss_dssp SSCCEEE-ECCCCCCTTSCCCCCEEECCSSCCSEEEEESSSCEECSEEETTEEEEEEEETTEEEEEEECTTCCHHHHHSC
T ss_pred cCCCccC-CCeEEEecCCCEEEEEEEeecCCCcEeEEEECCEEccCCCCCCEEEEEecCCCceEEEEEEcCCChhhCCce
Confidence 4566555 5566788999999999999999987 9999999887642 2222211111222245899999999998 99
Q ss_pred EEEEEEcCCCcceEEEEEEEec
Q psy7036 187 YKVTAKNELGESNATISLNFDS 208 (254)
Q Consensus 187 y~C~~~~~~~~~~~~~~~~v~~ 208 (254)
|+|.|.|..|.....+.|.|..
T Consensus 92 Y~C~a~N~~G~~~~~~~l~V~~ 113 (122)
T 2cry_A 92 YNCTAWNSFGSDTEIIRLKEQG 113 (122)
T ss_dssp EEEEEECSSCEEEEEECCCCSC
T ss_pred EEEEEECCCCeEEEEEEEEECC
Confidence 9999999999988888777764
No 415
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.56 E-value=1e-14 Score=103.01 Aligned_cols=124 Identities=13% Similarity=0.183 Sum_probs=80.2
Q ss_pred ecCCCeEEEEEEEeeCC----CCeEEEEECCEecccCCcc-eEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcc
Q psy7036 124 EDDGKRLLFECRIQADP----APTVIWSHSGVQVKEDKRH-KFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGES 198 (254)
Q Consensus 124 ~~~g~~~~l~C~~~~~~----~~~~~W~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~ 198 (254)
+..|+.+.|.|.+.+.+ ...+.|+|++..+...... ........+...+.|.|.+++.+|.|.|+|.|.|..+..
T Consensus 15 v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~~~~~~ 94 (207)
T 2vol_A 15 LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPA 94 (207)
T ss_dssp HSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTCCEEEEEECTTCSS
T ss_pred hccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCCEEEEEEEccCCCC
Confidence 67899999999998874 2489999999766422110 001111111223579999999999999999999988764
Q ss_pred eEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEecc-CCC-ceeC
Q psy7036 199 NATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGE-PEP-TISW 254 (254)
Q Consensus 199 ~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~-p~p-~~~W 254 (254)
.....+.+.. ....+|.+...+.......|+ .+.|.|.+.|. |++ .++|
T Consensus 95 ~~~~~v~~~~------~~~~~P~v~~~~~~~~~~~g~-~~~L~C~~~g~~P~~~~v~W 145 (207)
T 2vol_A 95 PIEKTISKTK------GRPKAPQVYTLPPPKEQMAKD-KVSLTCMITDFFPEDITVEW 145 (207)
T ss_dssp CEEEEECCCC------CCCBCCEEEEECCCTGGGSSS-EEEEEEEEEEEBSSCCEEEE
T ss_pred ceEEEeccCC------CCCcCCeEEEeCCCHHHhcCC-ceEEEEEEeeEECCCCEEEE
Confidence 3323332210 012356665444333344677 99999999985 553 7888
No 416
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.56 E-value=4.6e-14 Score=89.05 Aligned_cols=97 Identities=21% Similarity=0.397 Sum_probs=71.9
Q ss_pred CCccccCCCeeeecCCCeEEEEEEEeeC---CCCeEEEEECCE-ecccC--CcceEEE--cCCCCceeeEEEEccCCCCC
Q psy7036 112 APTFLKKPSIRQEDDGKRLLFECRIQAD---PAPTVIWSHSGV-QVKED--KRHKFSI--DKDGHSYFASLEIIDVTIED 183 (254)
Q Consensus 112 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~---~~~~~~W~~~~~-~~~~~--~~~~~~~--~~~~~~~~~~l~i~~~~~~d 183 (254)
.+.+...+..+.+.+|+.++|.|.+.+. |.|.+.|+|+.. .+... ....+.. ......+...|.|.++...|
T Consensus 12 ~~~f~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 91 (118)
T 2edn_A 12 TGVFLKKPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLGD 91 (118)
T ss_dssp SSSCSBCCCCCEEETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCTTT
T ss_pred cceEEECCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCChhh
Confidence 4456667778889999999999999875 789999999742 22211 1222221 12222345689999999999
Q ss_pred ceeEEEEEEcCCCcceEEEEEEEec
Q psy7036 184 AGKYKVTAKNELGESNATISLNFDS 208 (254)
Q Consensus 184 ~G~y~C~~~~~~~~~~~~~~~~v~~ 208 (254)
+|.|+|.+.|..|..+..+.|.|..
T Consensus 92 ~G~Y~Cevsn~~g~~s~~~~L~V~~ 116 (118)
T 2edn_A 92 RGYYRLEVKAKDTCDSCGFNIDVEA 116 (118)
T ss_dssp CSCEEEEEECSSCEEEEEECCEEEC
T ss_pred CEEEEEEEEEcCCcEEEEEEEEEEc
Confidence 9999999999999888888888874
No 417
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.56 E-value=6.5e-14 Score=99.27 Aligned_cols=125 Identities=22% Similarity=0.316 Sum_probs=82.0
Q ss_pred CCeeeecCCCeEEEEEEEeeC-------CCCeEEEEECCEec------c---------cCCcceEEEcCCCCceeeEEEE
Q psy7036 119 PSIRQEDDGKRLLFECRIQAD-------PAPTVIWSHSGVQV------K---------EDKRHKFSIDKDGHSYFASLEI 176 (254)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~-------~~~~~~W~~~~~~~------~---------~~~~~~~~~~~~~~~~~~~l~i 176 (254)
+..+.+.+|+.+.|.|.+.+. +.+.+.|+|++... . .....++....+......+|.|
T Consensus 7 p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I 86 (214)
T 2zg1_A 7 QKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSLSI 86 (214)
T ss_dssp CSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCEEE
T ss_pred CcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEEEE
Confidence 445678899999999998754 46689999986531 0 0111223332221112237999
Q ss_pred ccCCCCCceeEEEEEEcCCCcc----eEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEecc----C
Q psy7036 177 IDVTIEDAGKYKVTAKNELGES----NATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGE----P 248 (254)
Q Consensus 177 ~~~~~~d~G~y~C~~~~~~~~~----~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~----p 248 (254)
.+++.+|+|.|.|.+.+..+.. ...+.|.|... ...|.+.. +. .+.+|+ .+.|.|.+.+. |
T Consensus 87 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~-------~~~p~i~~-~~--~~~~G~-~v~L~C~~~~~~~~~p 155 (214)
T 2zg1_A 87 GDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTAL-------IEKPDIHF-LE--PLESGR-PTRLSCSLPGSCEAGP 155 (214)
T ss_dssp CSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECC-------CCCCEEC---C--CCCTTC-CEEEEEECTTCCSCSS
T ss_pred ccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecC-------CCCCceec-Cc--cccCCC-eEEEEEEeccCCCCCC
Confidence 9999999999999999875322 23566666642 12445543 22 256788 99999999874 7
Q ss_pred CCceeC
Q psy7036 249 EPTISW 254 (254)
Q Consensus 249 ~p~~~W 254 (254)
.|.++|
T Consensus 156 ~p~v~W 161 (214)
T 2zg1_A 156 PLTFSW 161 (214)
T ss_dssp CCEEEE
T ss_pred CceEEE
Confidence 889998
No 418
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.55 E-value=4e-14 Score=103.26 Aligned_cols=142 Identities=15% Similarity=0.237 Sum_probs=90.6
Q ss_pred CCccccCCCeeeecCCCeEEEEEEEeeC--CCCeEEEEECC--Eecc---------------cCCcceEEEcCCCCceee
Q psy7036 112 APTFLKKPSIRQEDDGKRLLFECRIQAD--PAPTVIWSHSG--VQVK---------------EDKRHKFSIDKDGHSYFA 172 (254)
Q Consensus 112 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~--~~~~~~W~~~~--~~~~---------------~~~~~~~~~~~~~~~~~~ 172 (254)
++.+...+..+.+.+|+.++|.|.+.+. +.+.+.|+|.. .... .....++....+......
T Consensus 6 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~ 85 (256)
T 3juy_B 6 HQVQLVQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTA 85 (256)
T ss_dssp -CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEE
T ss_pred ceEEEEecCCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCEE
Confidence 3444555667788999999999999873 56789999742 1100 000112222211111124
Q ss_pred EEEEccCCCCCceeEEEEEEcC------------CCcceEEEEEEEecCCCCCC-----CCCCCCeeecCCccccccCCC
Q psy7036 173 SLEIIDVTIEDAGKYKVTAKNE------------LGESNATISLNFDSDDAPVP-----GEGTKPVFTERPVTKQSDDDL 235 (254)
Q Consensus 173 ~l~i~~~~~~d~G~y~C~~~~~------------~~~~~~~~~~~v~~~~~~~~-----~~~~~p~~~~~~~~~~~~~g~ 235 (254)
.|.|.+++.+|+|.|.|.+.|. .+.......|.|........ ....++.+...+....+.+|+
T Consensus 86 ~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~ 165 (256)
T 3juy_B 86 YMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAPGTLSLSPGE 165 (256)
T ss_dssp EEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEECSEEEECTTS
T ss_pred EEEECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecCCeEEEeCCC
Confidence 7999999999999999999986 22233445566654221100 001134566667777889999
Q ss_pred CcEEEEEEEeccCC-CceeC
Q psy7036 236 NDIVIECRLVGEPE-PTISW 254 (254)
Q Consensus 236 ~~~~l~C~~~~~p~-p~~~W 254 (254)
.++|.|.+.+.|. +.+.|
T Consensus 166 -~v~L~C~~~~~~~~~~v~W 184 (256)
T 3juy_B 166 -RATFSCRSSHSIRSRRVAW 184 (256)
T ss_dssp -CEEEEEEESSCCTTCCEEE
T ss_pred -CEEEEEEECCCcCCeeEEE
Confidence 9999999999876 78988
No 419
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.55 E-value=1.8e-14 Score=104.60 Aligned_cols=124 Identities=17% Similarity=0.232 Sum_probs=80.9
Q ss_pred CCeeeecCCCeEEEEEEEeeCCCCe-----EEEEECCEecccC------CcceEEEcCCCC--------ceeeEEEEccC
Q psy7036 119 PSIRQEDDGKRLLFECRIQADPAPT-----VIWSHSGVQVKED------KRHKFSIDKDGH--------SYFASLEIIDV 179 (254)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~-----~~W~~~~~~~~~~------~~~~~~~~~~~~--------~~~~~l~i~~~ 179 (254)
+....+..|+.+.|.|.+.+.|.+. +.|++++...... ............ ...++|.|.++
T Consensus 10 p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v 89 (248)
T 3pv7_A 10 GGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPGI 89 (248)
T ss_dssp TSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESSC
T ss_pred CCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCCC
Confidence 3456778899999999999887765 9999964321100 000000000000 01236999999
Q ss_pred CCCCceeEEEEEEcCCCcceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEec-cCCC-ceeC
Q psy7036 180 TIEDAGKYKVTAKNELGESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVG-EPEP-TISW 254 (254)
Q Consensus 180 ~~~d~G~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~-~p~p-~~~W 254 (254)
+.+|+|.|+|.+.+..+.....+.|.|.. +|.+...+.. .+..|+ .+.|.|.+.| .|.| .++|
T Consensus 90 ~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~----------~P~v~~~~~~-~~~~~~-~~~L~C~~~g~~P~pi~v~W 154 (248)
T 3pv7_A 90 QLEEAGEYRCEVVVTPLKAQGTVQLEVVA----------SPASRLLLDQ-VGMKEN-EDKYMCESSGFYPEAINITW 154 (248)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEEEEEEB----------CCEEEEECC----------CEEEEEEEEEBSSCCEEEE
T ss_pred CHHHCeEEEEEEEeCCccceeEEEEEEec----------CCceEEecCC-ccccCC-CcEEEEEEccEECCCeEEEE
Confidence 99999999999999887777777888874 4555544442 345667 7889999998 7988 8998
No 420
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.55 E-value=1.4e-13 Score=98.43 Aligned_cols=126 Identities=19% Similarity=0.342 Sum_probs=81.1
Q ss_pred eeeecCCCeEEEEEEEeeCC--CCeEEEEECC--Eecc---------------cCCcceEEEcCCCCceeeEEEEccCCC
Q psy7036 121 IRQEDDGKRLLFECRIQADP--APTVIWSHSG--VQVK---------------EDKRHKFSIDKDGHSYFASLEIIDVTI 181 (254)
Q Consensus 121 ~~~~~~g~~~~l~C~~~~~~--~~~~~W~~~~--~~~~---------------~~~~~~~~~~~~~~~~~~~l~i~~~~~ 181 (254)
...+.+|+.++|.|.+.+.+ .+.+.|+|+. ..+. .....++....+.......|.|.+++.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 88 (225)
T 1op3_H 9 GGLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKMRV 88 (225)
T ss_dssp CEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSCCG
T ss_pred CeEecCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECCCCh
Confidence 35677899999999998776 6789999853 2110 001112222211111124899999999
Q ss_pred CCceeEEEEEEcCCC-----c---ceEEEEEEEecCCCCCCCCCCCCeeec-CCccccccCCCCcEEEEEEEecc-CCC-
Q psy7036 182 EDAGKYKVTAKNELG-----E---SNATISLNFDSDDAPVPGEGTKPVFTE-RPVTKQSDDDLNDIVIECRLVGE-PEP- 250 (254)
Q Consensus 182 ~d~G~y~C~~~~~~~-----~---~~~~~~~~v~~~~~~~~~~~~~p~~~~-~~~~~~~~~g~~~~~l~C~~~~~-p~p- 250 (254)
+|+|.|.|.+.+..+ . ......|.|.... ..+|.+.. .+.. .+..|+ .+.|.|.+.|. |.|
T Consensus 89 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~------~~~P~v~~~~~~~-~~~~g~-~v~L~C~~~g~~P~p~ 160 (225)
T 1op3_H 89 EDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPAS------TKGPSVFPLAPSS-KSTSGG-TAALGCLVKDYFPEPV 160 (225)
T ss_dssp GGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCS------CBCCEEEEECCCT-TCCCCC-EEEEEEEEEEEBSSCC
T ss_pred hhCEEEEEEEecCCCccccccceeecCCEEEecccCC------CcCCeEEEecccc-cccCCC-cEEEEEEEEeEECCCe
Confidence 999999999999764 1 1123456666411 12344433 3333 456788 99999999987 777
Q ss_pred ceeC
Q psy7036 251 TISW 254 (254)
Q Consensus 251 ~~~W 254 (254)
.++|
T Consensus 161 ~v~W 164 (225)
T 1op3_H 161 TVSW 164 (225)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 8999
No 421
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.55 E-value=7.6e-14 Score=97.47 Aligned_cols=110 Identities=15% Similarity=0.164 Sum_probs=80.9
Q ss_pred eeeecCCCeEEEEEEEeeCCCC--eEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcc
Q psy7036 121 IRQEDDGKRLLFECRIQADPAP--TVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGES 198 (254)
Q Consensus 121 ~~~~~~g~~~~l~C~~~~~~~~--~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~ 198 (254)
.+.+..|+++.|.|.+ +.|.| .|.|.+.+..+ .. ......+ ..|.|.+++.+|.|.|.|.+.|..+..
T Consensus 16 ~v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l---~~--~~~~~~~----~~L~I~~v~~~d~G~Y~C~a~n~~~~~ 85 (210)
T 1gsm_A 16 VVAVALGASRQLTCRL-ACADRGASVQWRGLDTSL---GA--VQSDTGR----SVLTVRNASLSAAGTRVCVGSCGGRTF 85 (210)
T ss_dssp EEEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTT---CC--EEEESSE----EEEEECSCCGGGCEEEEEEEEETTEEE
T ss_pred ceEEeCCCCEEEEEEC-CCCCCCcceEEeeccccc---Cc--EEecCCc----cEEEECccCcccCceEEEEEEeCCCce
Confidence 3578899999999999 88877 99999855333 11 1111111 379999999999999999999988877
Q ss_pred eEEEEEEEecCCCCCCCCCCCCeeec-CCccccccCCCCcEEEEEEEecc-CCC----ceeC
Q psy7036 199 NATISLNFDSDDAPVPGEGTKPVFTE-RPVTKQSDDDLNDIVIECRLVGE-PEP----TISW 254 (254)
Q Consensus 199 ~~~~~~~v~~~~~~~~~~~~~p~~~~-~~~~~~~~~g~~~~~l~C~~~~~-p~p----~~~W 254 (254)
...+.|.|.. +|.... .+. .+..|+ .+ |.|.+.+. |.+ .|.|
T Consensus 86 ~~~~~ltV~~----------~P~~~~i~~~--~~~~g~-~~-l~C~a~g~~P~~~~~lti~W 133 (210)
T 1gsm_A 86 QHTVQLLVYA----------FPNQLTVSPA--ALVPGD-PE-VACTAHKVTPVDPNALSFSL 133 (210)
T ss_dssp EEEEEEEEEB----------CCSEEEEESS--SBCTTC-CE-EEEEEEEEBCCCTTTEEEEE
T ss_pred EEEEEEEEEe----------cCCCcEEccc--eEEeCC-ce-EEEEeCCCCCCCCCCcEEEE
Confidence 7888888885 332222 232 566777 78 99999986 644 6877
No 422
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.55 E-value=4.8e-14 Score=101.70 Aligned_cols=133 Identities=11% Similarity=0.164 Sum_probs=82.0
Q ss_pred CCeeeecCCCeEEEEEEEeeCCCCeEEEEECC--Eecc-------------cCCcceEEEcCCCCceeeEEEEccCCCCC
Q psy7036 119 PSIRQEDDGKRLLFECRIQADPAPTVIWSHSG--VQVK-------------EDKRHKFSIDKDGHSYFASLEIIDVTIED 183 (254)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~--~~~~-------------~~~~~~~~~~~~~~~~~~~l~i~~~~~~d 183 (254)
+..+.+.+|+.++|.|. .+.+.+.+.|+|+. .... .....++..... ......|.|.+++.+|
T Consensus 7 p~~~~v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~L~I~~v~~~D 84 (238)
T 2p1y_A 7 PRNKVAVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRP-SQENFSLILELATPSQ 84 (238)
T ss_dssp CSEEEEETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECC-SSSBCEEEESSCCGGG
T ss_pred ccceEEeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEcc-CCceEEEEEecCCccc
Confidence 45667889999999999 67888999999952 1110 000111222110 0012379999999999
Q ss_pred ceeEEEEEEcCCCcc-----eEEEEEEEecCCCCC-C-CCCCCCeeecCCccccccCCCCcEEEEEEEeccCCCceeC
Q psy7036 184 AGKYKVTAKNELGES-----NATISLNFDSDDAPV-P-GEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEPEPTISW 254 (254)
Q Consensus 184 ~G~y~C~~~~~~~~~-----~~~~~~~v~~~~~~~-~-~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p~p~~~W 254 (254)
+|.|+|.+.|..+.. .....+.|....+.. + .....+.+...|....+.+|+ .+.|.|.+.+.|.|.+.|
T Consensus 85 sG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~v~~G~-~v~L~C~~~~~p~~~i~W 161 (238)
T 2p1y_A 85 TSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTVWEGE-TAILNCSYENSAFDYFPW 161 (238)
T ss_dssp CEEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSEEEEETTS-CEEEEEECCCTTCCEEEE
T ss_pred CeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCceEEEeCCC-eEEEEEEEecCCCCcEEE
Confidence 999999999876521 123345554311000 0 000001455556666788999 999999999999999988
No 423
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.55 E-value=4.7e-14 Score=99.88 Aligned_cols=127 Identities=17% Similarity=0.200 Sum_probs=82.4
Q ss_pred CCeeeecCCCeEEEEEEEeeCC---CCeEEEEECC--Eecc----------cCCcceEEEcCCCCceeeEEEEccCCCCC
Q psy7036 119 PSIRQEDDGKRLLFECRIQADP---APTVIWSHSG--VQVK----------EDKRHKFSIDKDGHSYFASLEIIDVTIED 183 (254)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~---~~~~~W~~~~--~~~~----------~~~~~~~~~~~~~~~~~~~l~i~~~~~~d 183 (254)
+....+..|+.+.|.|.+.+.+ .+.+.|+|++ ..+. .....++.....+ ..+.|.|.+++.+|
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~L~I~~v~~~D 84 (212)
T 1q0x_L 7 ESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIG--DKAALTITGAQTED 84 (212)
T ss_dssp CSEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEET--TEEEEEESSCCGGG
T ss_pred CCeEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeC--CEEEEEECCCCccC
Confidence 4567788999999999998877 4689999863 2210 0001112211111 12379999999999
Q ss_pred ceeEEEEEEcCCCcc-eEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEeccCC-C-ceeC
Q psy7036 184 AGKYKVTAKNELGES-NATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEPE-P-TISW 254 (254)
Q Consensus 184 ~G~y~C~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p~-p-~~~W 254 (254)
+|.|.|.+.|..+.. .....+.|.... ..+|.+...+....+..|+ .+.|.|.+.|.++ + .++|
T Consensus 85 ~G~Y~C~~~~~~~~~~~~~~~l~V~~~~------~~~P~v~~~~~~~~~~~g~-~v~L~C~~~g~~p~~~~v~W 151 (212)
T 1q0x_L 85 EAIYFCALWSNNKLVFGGGTKLTVLGQP------KSSPTVTLFPPSSEELSTA-KATLVCTITDFYPGVVTVDW 151 (212)
T ss_dssp CEEEEEEEECSSCEEECCCEEEEECCSC------CBCCEEEEECCCHHHHTTT-EEEEEEEEEEEBSSCCEEEE
T ss_pred CEEEEEEEecCchhhcCCCeEEEEecCC------CCCCeeEEeCCCHHHccCC-cEEEEEEEEEEeCCCeEEEE
Confidence 999999999976532 233445553211 1256666544434455788 9999999998644 3 7888
No 424
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.55 E-value=2.1e-14 Score=94.11 Aligned_cols=85 Identities=27% Similarity=0.438 Sum_probs=65.8
Q ss_pred CCeeeecCCCeEEEEEEEeeCCCCeEEEEECC----------------------------Eecc-cCCcceEEEcCCCCc
Q psy7036 119 PSIRQEDDGKRLLFECRIQADPAPTVIWSHSG----------------------------VQVK-EDKRHKFSIDKDGHS 169 (254)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~----------------------------~~~~-~~~~~~~~~~~~~~~ 169 (254)
+..+.+..|+.+.|.|.+.|.|.|.+.|+|++ ..+. ...+..+... +.
T Consensus 25 p~~~~v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~--~~- 101 (139)
T 1gxe_A 25 PDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETT--KD- 101 (139)
T ss_dssp CCEEEESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEE--TT-
T ss_pred CCCEEEeCCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeC--CC-
Confidence 45678899999999999999999999999998 3331 1122222211 11
Q ss_pred eeeEEEEccCCCCCceeEEEEEEcCCCcceEEEEEEEe
Q psy7036 170 YFASLEIIDVTIEDAGKYKVTAKNELGESNATISLNFD 207 (254)
Q Consensus 170 ~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~ 207 (254)
.+.|.|.++..+|+|.|+|.|.|..|....++.|.|.
T Consensus 102 -~s~L~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V~ 138 (139)
T 1gxe_A 102 -RSIFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVI 138 (139)
T ss_dssp -EEEEECSCCCTTTCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred -EEEEEECCCCcccCEEEEEEEEeCCceEEEEEEEEEE
Confidence 2479999999999999999999999988888887764
No 425
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.55 E-value=6.7e-14 Score=102.15 Aligned_cols=134 Identities=15% Similarity=0.245 Sum_probs=84.7
Q ss_pred CeeeecCCCeEEEEEEEeeC--CCCeEEEEECC--Ee--cc------------cCCcceEEEcCCCCceeeEEEEccCCC
Q psy7036 120 SIRQEDDGKRLLFECRIQAD--PAPTVIWSHSG--VQ--VK------------EDKRHKFSIDKDGHSYFASLEIIDVTI 181 (254)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~~--~~~~~~W~~~~--~~--~~------------~~~~~~~~~~~~~~~~~~~l~i~~~~~ 181 (254)
....+.+|+.++|.|.+.+. +.+.+.|+|.. .. .. .....++....+.......|.|.+++.
T Consensus 16 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 95 (257)
T 3gkz_A 16 GPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYLQLKSVSS 95 (257)
T ss_dssp CCSEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCG
T ss_pred CCeEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEEEECCCCh
Confidence 34567889999999999884 46789999842 11 10 000111222211111224799999999
Q ss_pred CCceeEEEEEEcCCCc----ceEEEEEEEecCCC----CCCCCCCCCeeecCCccccccCCCCcEEEEEEEeccCCC-ce
Q psy7036 182 EDAGKYKVTAKNELGE----SNATISLNFDSDDA----PVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEPEP-TI 252 (254)
Q Consensus 182 ~d~G~y~C~~~~~~~~----~~~~~~~~v~~~~~----~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p~p-~~ 252 (254)
+|+|.|.|.+.|..+. ......+.|..... +.......+.+...+....+.+|+ .++|.|.+.+.|.+ .+
T Consensus 96 ~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~-~v~L~C~~~~~~~~~~v 174 (257)
T 3gkz_A 96 EDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMSASPGE-KVTLTCSASSSVSSSHL 174 (257)
T ss_dssp GGCEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSEEEECTTC-CEEEEEEESSCCCGGGE
T ss_pred hhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCceEEEeCCC-cEEEEEEEccCccceEE
Confidence 9999999999997321 22334566653210 000011245666667777888999 99999999998887 88
Q ss_pred eC
Q psy7036 253 SW 254 (254)
Q Consensus 253 ~W 254 (254)
.|
T Consensus 175 ~W 176 (257)
T 3gkz_A 175 YW 176 (257)
T ss_dssp EE
T ss_pred EE
Confidence 88
No 426
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.55 E-value=2e-14 Score=89.16 Aligned_cols=83 Identities=25% Similarity=0.481 Sum_probs=65.8
Q ss_pred CeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcce-EEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcc
Q psy7036 120 SIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHK-FSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGES 198 (254)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~ 198 (254)
....+..|+.+.|.|.+.+.|.+.+.|++++..+....... .....+. ..|.|.+++.+|+|.|+|.|.|..|..
T Consensus 16 ~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~----~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 91 (100)
T 3caf_A 16 RLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQH----WSLIMESVVPSDKGNYTCVVENEYGSI 91 (100)
T ss_dssp CEEEECTTCCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGG----TEEEECSCCGGGCEEEEEEEEETTEEE
T ss_pred cEEEecCCCEEEEEEEccccCCCEEEEEECCEEcccccccccEEEecCe----EEEEEccCCcCCCEEEEEEEEeCCCEE
Confidence 45678899999999999999999999999998876543221 1111111 279999999999999999999999988
Q ss_pred eEEEEEEE
Q psy7036 199 NATISLNF 206 (254)
Q Consensus 199 ~~~~~~~v 206 (254)
..++.|.|
T Consensus 92 ~~~~~l~V 99 (100)
T 3caf_A 92 NHTYHLDV 99 (100)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 77777765
No 427
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.55 E-value=5.9e-14 Score=102.42 Aligned_cols=132 Identities=15% Similarity=0.237 Sum_probs=84.1
Q ss_pred eeecCCCeEEEEEEEeeCC--CCeEEEEECC--Eecc--------------cCCcceEEEcCCCCceeeEEEEccCCCCC
Q psy7036 122 RQEDDGKRLLFECRIQADP--APTVIWSHSG--VQVK--------------EDKRHKFSIDKDGHSYFASLEIIDVTIED 183 (254)
Q Consensus 122 ~~~~~g~~~~l~C~~~~~~--~~~~~W~~~~--~~~~--------------~~~~~~~~~~~~~~~~~~~l~i~~~~~~d 183 (254)
..+.+|+.++|.|.+.+.| .+.+.|+|+. ..+. .....++....+.......|.|.+++.+|
T Consensus 10 ~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 89 (257)
T 1f3r_B 10 GLVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSLQTDD 89 (257)
T ss_dssp SEECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESCCTTC
T ss_pred ccccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCCccc
Confidence 4577899999999998875 6789999862 1110 00011222221111112479999999999
Q ss_pred ceeEEEEEEcCCC------cc---eEEEEEEEecCCCC-----CCCCCCCCeeecCCccccccCCCCcEEEEEEEeccCC
Q psy7036 184 AGKYKVTAKNELG------ES---NATISLNFDSDDAP-----VPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEPE 249 (254)
Q Consensus 184 ~G~y~C~~~~~~~------~~---~~~~~~~v~~~~~~-----~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p~ 249 (254)
+|.|.|.+.|..| .. .....|.|...... .+....++.+...|....+.+|+ .++|.|.+.+.|.
T Consensus 90 sG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~-~v~L~C~~~~~~~ 168 (257)
T 1f3r_B 90 TGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGD-RVTLSCKGSQNIN 168 (257)
T ss_dssp CEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCTTC-CEEEEEECSSCCB
T ss_pred CEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcCCC-CEEEEEEECCcCC
Confidence 9999999999854 11 12345666542100 00001123344456666788999 9999999999988
Q ss_pred CceeC
Q psy7036 250 PTISW 254 (254)
Q Consensus 250 p~~~W 254 (254)
+.+.|
T Consensus 169 ~~v~W 173 (257)
T 1f3r_B 169 NYLAW 173 (257)
T ss_dssp TCEEE
T ss_pred CcEEE
Confidence 89988
No 428
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.55 E-value=1.9e-14 Score=110.23 Aligned_cols=107 Identities=16% Similarity=0.175 Sum_probs=67.3
Q ss_pred CCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCC--cceEEEeecCCcceEEEEEEeccCCCCCeEEEEEEEcC
Q psy7036 14 KPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDT--RTVMKTTPIGTNKYLVALELDDVIETDAGLYKVKAKNK 91 (254)
Q Consensus 14 ~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~ 91 (254)
.+..+.+.+|+++.|.|.+.| |.+.++|++++..+.... ..++.. ..+ .|.|.+++.+|+|.|+|.|.|.
T Consensus 252 ~~~~v~v~~G~~~~l~C~~~g-p~p~i~W~~~~~~~~~~~~~~~r~~~-~~~------~L~I~~v~~~D~G~Y~C~a~N~ 323 (361)
T 2xot_A 252 KESAWEAHLGDTLTIRCDTKQ-QGMTKVWVSPSNEQVLSQGSNGSVSV-RNG------DLFFKKVQVEDGGVYTCYAMGE 323 (361)
T ss_dssp CCCCCEEETTCCEEECCCCSS-TTCEEEEECTTSCBCCSCCSSSSEEE-ETT------EEEESSCCTTSCEEEEEEEECS
T ss_pred cccCceecCCCeEEEEeEeeC-CCCeEEEEeCCCeeEeecccCCceEe-ecC------eEEEeecCcccCEEEEEEEecC
Confidence 345668999999999999998 889999999776543221 112322 222 7999999999999999999999
Q ss_pred CCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEE
Q psy7036 92 MGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVI 145 (254)
Q Consensus 92 ~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~ 145 (254)
.|.....+.|.|.. .+ ..|..+.+.|.+.|.|.|.+.
T Consensus 324 ~g~~~~~~~l~V~~------~~-----------~~g~~~~l~C~~~g~P~P~i~ 360 (361)
T 2xot_A 324 TFNETLSVELKVYN------FT-----------LHGHHDTLNAAADPWSHPQFE 360 (361)
T ss_dssp SCEEEEEEEEEEES------SC-----------CC-------------------
T ss_pred CCccEEEEEEEEEe------ee-----------ccCCceEEEEEeCCCCCCccc
Confidence 99888888888852 11 467789999999999988763
No 429
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.54 E-value=2.2e-14 Score=109.77 Aligned_cols=106 Identities=17% Similarity=0.231 Sum_probs=66.9
Q ss_pred CCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCC--cceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCC
Q psy7036 119 PSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDK--RHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELG 196 (254)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~ 196 (254)
+....+.+|+.+.|.|.+.+ |.+.+.|++++..+.... ..++.. .++ .|.|.+++.+|+|.|+|.|.|..|
T Consensus 253 ~~~v~v~~G~~~~l~C~~~g-p~p~i~W~~~~~~~~~~~~~~~r~~~-~~~-----~L~I~~v~~~D~G~Y~C~a~N~~g 325 (361)
T 2xot_A 253 ESAWEAHLGDTLTIRCDTKQ-QGMTKVWVSPSNEQVLSQGSNGSVSV-RNG-----DLFFKKVQVEDGGVYTCYAMGETF 325 (361)
T ss_dssp CCCCEEETTCCEEECCCCSS-TTCEEEEECTTSCBCCSCCSSSSEEE-ETT-----EEEESSCCTTSCEEEEEEEECSSC
T ss_pred ccCceecCCCeEEEEeEeeC-CCCeEEEEeCCCeeEeecccCCceEe-ecC-----eEEEeecCcccCEEEEEEEecCCC
Confidence 34567889999999999988 899999999776543221 123333 333 799999999999999999999999
Q ss_pred cceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEeccCCCcee
Q psy7036 197 ESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEPEPTIS 253 (254)
Q Consensus 197 ~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p~p~~~ 253 (254)
.....+.+.|.. . ..+|+ .+.|.|.+.|.|.|.|+
T Consensus 326 ~~~~~~~l~V~~----------~-----------~~~g~-~~~l~C~~~g~P~P~i~ 360 (361)
T 2xot_A 326 NETLSVELKVYN----------F-----------TLHGH-HDTLNAAADPWSHPQFE 360 (361)
T ss_dssp EEEEEEEEEEES----------S-----------CCC--------------------
T ss_pred ccEEEEEEEEEe----------e-----------eccCC-ceEEEEEeCCCCCCccc
Confidence 888888888853 1 15677 99999999999999874
No 430
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.54 E-value=3e-14 Score=86.87 Aligned_cols=88 Identities=15% Similarity=0.129 Sum_probs=67.0
Q ss_pred CCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEE
Q psy7036 111 LAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVT 190 (254)
Q Consensus 111 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~ 190 (254)
.++.+...+....+.+|+.+.|.|.+.+ +.+.+.|+|+|..+....+..+...... ..|.|.+++.+|+|.|+|.
T Consensus 4 ~~~~~~~~~~~~~v~~G~~v~l~C~v~~-~~~~v~W~k~g~~i~~~~~~~i~~~g~~----~~L~I~~v~~~D~G~Y~C~ 78 (93)
T 1waa_A 4 ALIEVEKPLYGVEVFVGETAHFEIELSE-PDVHGQWKLKGQPLAASPDCEIIEDGKK----HILILHNCQLGMTGEVSFQ 78 (93)
T ss_dssp CCCCEEECCCCEEEETTSCEEEEEEESS-SSCCCEEEETTEECCCBTTEEEEEETTE----EEEEECSCCGGGCEEEEEE
T ss_pred CCcEeeccCcceEEeCCCCEEEEEEECC-CCCeEEEEECCEECcCCCCEEEEEECCE----EEEEECCCChhhCEEEEEE
Confidence 3556666667788999999999999975 4578999999999876665554433221 3799999999999999999
Q ss_pred EEcCCCcceEEEEEEEe
Q psy7036 191 AKNELGESNATISLNFD 207 (254)
Q Consensus 191 ~~~~~~~~~~~~~~~v~ 207 (254)
|.|. ..+..|.|.
T Consensus 79 a~n~----~~sa~L~V~ 91 (93)
T 1waa_A 79 AANT----KSAANLKVK 91 (93)
T ss_dssp ETTE----EEEEEEEEE
T ss_pred ECCC----cEEEEEEEE
Confidence 9773 345556654
No 431
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.54 E-value=5.3e-14 Score=101.33 Aligned_cols=126 Identities=19% Similarity=0.279 Sum_probs=83.8
Q ss_pred CCeeeecCCCeEEEEEEEeeCCCCeEEEEECCE--e---cc-------cCCcceEEEcCCCCceeeEEEEccCCCCCcee
Q psy7036 119 PSIRQEDDGKRLLFECRIQADPAPTVIWSHSGV--Q---VK-------EDKRHKFSIDKDGHSYFASLEIIDVTIEDAGK 186 (254)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~--~---~~-------~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 186 (254)
+....+.+|+.+.|.|.+.+.+.+.+.|+|+.. . +. .....++.....+ ....|.|.+++.+|+|.
T Consensus 31 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~L~I~~v~~~D~G~ 108 (237)
T 3sob_L 31 PSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSG--TDFTLTISSLQPEDFAT 108 (237)
T ss_dssp CSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET--TEEEEEESSCCGGGCEE
T ss_pred CCeEEEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCC--CEEEEEECCCChhhCeE
Confidence 455678899999999999888888999998431 1 00 0001111111111 12479999999999999
Q ss_pred EEEEEEcCCCcc-eEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEecc-C-CCceeC
Q psy7036 187 YKVTAKNELGES-NATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGE-P-EPTISW 254 (254)
Q Consensus 187 y~C~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~-p-~p~~~W 254 (254)
|+|.+.+..+.. .....+.|.. ...+|.+...+....+.+|+ .+.|.|.+.+. | .|.++|
T Consensus 109 Y~C~~~~~~~~~~~~~~~l~V~~-------~~~~p~v~~~~~~~~~~~g~-~v~l~C~~~~~~p~~~~v~W 171 (237)
T 3sob_L 109 YYCQQSYTTPPTFGQGTKVEIKR-------TVAAPSVFIFPPSDEQLKSG-TASVVCLLNNFYPREAKVQW 171 (237)
T ss_dssp EEEEECSSSSCEECCCEEEEEEC-------CCBCCEEEEECCCHHHHHHT-EEEEEEEEEEEBSSCCEEEE
T ss_pred EEEeeccCCceEEcCcEEEEEec-------CCCCCceEEeCCChhhccCC-ceEEEEEEcccCCCceEEEE
Confidence 999998876532 2334455543 12356666555544556788 89999999885 5 478988
No 432
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.54 E-value=5.9e-14 Score=84.99 Aligned_cols=85 Identities=13% Similarity=0.246 Sum_probs=61.7
Q ss_pred CCccccCCCe--eeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEE
Q psy7036 112 APTFLKKPSI--RQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKV 189 (254)
Q Consensus 112 ~~~~~~~~~~--~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C 189 (254)
|+.+...... +.+.+|+.+.|.|.+.+ |.+.+.|+|+|..+.......+....+. ..|.|.++..+|+|.|+|
T Consensus 4 P~~i~~p~~~~~v~~~~g~~v~l~C~v~~-p~~~v~W~k~g~~i~~~~~~~i~~~~~~----~~L~I~~v~~~D~G~Y~C 78 (91)
T 2lvc_A 4 PVHIVDPREHVFVHAITSECVMLACEVDR-EDAPVRWYKDGQEVEESDFVVLENEGPH----RRLVLPATQPSDGGEFQC 78 (91)
T ss_dssp CCCCCBCCSCEEEECCTTCCEEEEEECSC-TTSCCEEEETTSCCCCCSSCEEEEETTE----EEEEESSCCGGGCSEEEE
T ss_pred CcEEeccCCCeEEEEECCCcEEEEEEECC-CCcEEEEEECCEEeeeeeeeeEEecCCe----EEEEeCCCChhhcEEEEE
Confidence 4444433333 34568999999999854 7888999999999987766555443322 379999999999999999
Q ss_pred EEEcCCCcceEEEEEE
Q psy7036 190 TAKNELGESNATISLN 205 (254)
Q Consensus 190 ~~~~~~~~~~~~~~~~ 205 (254)
.|.| ...++.|.
T Consensus 79 ~a~n----~~~~~~lt 90 (91)
T 2lvc_A 79 VAGD----ECAYFTVT 90 (91)
T ss_dssp ECSS----CEEEEEEE
T ss_pred EEcc----eEEEEEEE
Confidence 9855 44555444
No 433
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.53 E-value=9.2e-14 Score=102.80 Aligned_cols=133 Identities=17% Similarity=0.289 Sum_probs=84.7
Q ss_pred CeeeecCCCeEEEEEEEeeCC--CCeEEEEECCE--ecc---------------cCCcceEEEcCCCCceeeEEEEccCC
Q psy7036 120 SIRQEDDGKRLLFECRIQADP--APTVIWSHSGV--QVK---------------EDKRHKFSIDKDGHSYFASLEIIDVT 180 (254)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~~~--~~~~~W~~~~~--~~~---------------~~~~~~~~~~~~~~~~~~~l~i~~~~ 180 (254)
....+.+|+.++|.|.+.+.+ .+.+.|+|++. .+. .....++....+.......|.|.+++
T Consensus 34 ~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 113 (282)
T 1qok_A 34 GAELVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQLSSLT 113 (282)
T ss_dssp CCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEECSCC
T ss_pred CCEEEeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEEECcCC
Confidence 456778999999999998775 57899999641 110 00011222221111112479999999
Q ss_pred CCCceeEEEEEEcCCCc-----ceEEEEEEEecCCCC-----CCCCCCCCeeecCCccccccCCCCcEEEEEEEeccCCC
Q psy7036 181 IEDAGKYKVTAKNELGE-----SNATISLNFDSDDAP-----VPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEPEP 250 (254)
Q Consensus 181 ~~d~G~y~C~~~~~~~~-----~~~~~~~~v~~~~~~-----~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p~p 250 (254)
.+|+|.|.|.+.|..|. ......|.|...+.. .+....++.+...|....+.+|+ .++|.|.+.+.| +
T Consensus 114 ~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~-~v~L~C~~~~~~-~ 191 (282)
T 1qok_A 114 SEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGE-KVTITCSASSSV-S 191 (282)
T ss_dssp GGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECSEEEECTTC-CEEEEEEESSCC-S
T ss_pred hhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCCEEEEcCCC-cEEEEEEecCCC-c
Confidence 99999999999998651 112345666542210 00001234555566667788999 999999999998 8
Q ss_pred ceeC
Q psy7036 251 TISW 254 (254)
Q Consensus 251 ~~~W 254 (254)
.+.|
T Consensus 192 ~v~W 195 (282)
T 1qok_A 192 YMHW 195 (282)
T ss_dssp CCEE
T ss_pred eEEE
Confidence 8888
No 434
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.53 E-value=4.3e-14 Score=100.23 Aligned_cols=119 Identities=13% Similarity=0.066 Sum_probs=80.1
Q ss_pred CCeeeecCC--CeEEEEEEEeeCCCCeEEEEEC---CEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEc
Q psy7036 119 PSIRQEDDG--KRLLFECRIQADPAPTVIWSHS---GVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKN 193 (254)
Q Consensus 119 ~~~~~~~~g--~~~~l~C~~~~~~~~~~~W~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~ 193 (254)
+..+.+.+| +.+.|.|.+.+ |.+.+.|+++ +..+.... .+....+. .|.|.+++.+|+|.|+|.|.|
T Consensus 14 p~~v~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~~~--~~~~~~~~-----~l~I~~v~~~D~G~Y~C~a~n 85 (213)
T 2x1w_L 14 HGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGN--RISWDSKK-----GFTIPSYMISYAGMVFCEAKI 85 (213)
T ss_dssp CEEEEECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECCCSS--SCEEETTT-----EEEEEGGGTTTCSEEEEEEC-
T ss_pred ceEEEEecCCCccEEEeeccCC-CCcEEEEEhhcCCCccccCCC--cccccCCc-----cEEEccCChhcCceEEEEEEE
Confidence 356778899 99999999865 7789999884 55554332 22223333 699999999999999999998
Q ss_pred CCCcce-EEEEEEEecCCCCCCCCCCCCeeec-CCccccccCCCCcEEEEEEEeccCC--CceeC
Q psy7036 194 ELGESN-ATISLNFDSDDAPVPGEGTKPVFTE-RPVTKQSDDDLNDIVIECRLVGEPE--PTISW 254 (254)
Q Consensus 194 ~~~~~~-~~~~~~v~~~~~~~~~~~~~p~~~~-~~~~~~~~~g~~~~~l~C~~~~~p~--p~~~W 254 (254)
..+... ..+.+.|.. ..+|.+.. .+....+.+|+ .+.|.|.+.|.|. +.++|
T Consensus 86 ~~~~~~s~~~~l~v~~--------~~~p~~~~~~~~~~~v~~G~-~v~L~C~~~g~p~~~~~i~W 141 (213)
T 2x1w_L 86 NDESYQSIMYIVVVVG--------YRIYDVVLSPSHGIELSVGE-KLVLNCTARTELNVGIDFNW 141 (213)
T ss_dssp ---CEECCCEEEEECB--------CCEEEEEEESCSCEEEETTC-CEEEEEEEEECTTBCCEEEE
T ss_pred CCeeEEEEEEEEEEeC--------CcccceEEcCCCCeEEcCCC-CEEEEEEEECCCCCceEEEE
Confidence 544332 225555532 11333433 33444788999 9999999998654 46888
No 435
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.53 E-value=2.4e-13 Score=96.88 Aligned_cols=126 Identities=15% Similarity=0.225 Sum_probs=82.4
Q ss_pred eeeecCCCeEEEEEEEeeCC--CCeEEEEECC--Ee---cc-c-----------CCcceEEEcCCCCceeeEEEEccCCC
Q psy7036 121 IRQEDDGKRLLFECRIQADP--APTVIWSHSG--VQ---VK-E-----------DKRHKFSIDKDGHSYFASLEIIDVTI 181 (254)
Q Consensus 121 ~~~~~~g~~~~l~C~~~~~~--~~~~~W~~~~--~~---~~-~-----------~~~~~~~~~~~~~~~~~~l~i~~~~~ 181 (254)
...+.+|+.++|.|.+.+.+ .+.+.|+|.. .. +. . ....++....+.......|.|.+++.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 88 (220)
T 2fbj_H 9 GGLVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKVRS 88 (220)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSCCG
T ss_pred CeEecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCCCh
Confidence 46678899999999998765 5689999853 11 10 0 01122322222111234899999999
Q ss_pred CCceeEEEEEEcCCCc---ceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEecc-CC--CceeC
Q psy7036 182 EDAGKYKVTAKNELGE---SNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGE-PE--PTISW 254 (254)
Q Consensus 182 ~d~G~y~C~~~~~~~~---~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~-p~--p~~~W 254 (254)
+|+|.|.|.+.+..+. ......|.|.... ..+|.+...+ ...+..|+ .+.|.|.+.+. |. +.++|
T Consensus 89 ~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~------~~~P~v~~~~-~~~~~~g~-~v~L~C~~~g~~P~~~~~v~W 159 (220)
T 2fbj_H 89 EDTALYYCARLHYYGYNAYWGQGTLVTVSAES------ARNPTIYPLT-LPPALSSD-PVIIGCLIHDYFPSGTMNVTW 159 (220)
T ss_dssp GGCEEEEEEEEETTTEEEEECCCEEEEECSSC------CBCCEEEEEC-CCSSSCCS-SEEEEEEEEEEBSCCCEEEEE
T ss_pred hhCEEEEEEEeccccccceecCCEEEEecCCC------CCCCEEEEee-cccccCCC-cEEEEEEEEeEECCCcEEEEE
Confidence 9999999999987542 2223456665321 1245555444 33456788 99999999987 76 68888
No 436
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.53 E-value=5.1e-14 Score=102.07 Aligned_cols=131 Identities=19% Similarity=0.276 Sum_probs=83.2
Q ss_pred CCCeeeecCCCeEEEEEEEeeCCCCeEEEEEC----------------CEecccC-CcceEEEcCCCCceeeEEEEccCC
Q psy7036 118 KPSIRQEDDGKRLLFECRIQADPAPTVIWSHS----------------GVQVKED-KRHKFSIDKDGHSYFASLEIIDVT 180 (254)
Q Consensus 118 ~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~----------------~~~~~~~-~~~~~~~~~~~~~~~~~l~i~~~~ 180 (254)
.+..+.+.+|+.+.|.|.+.+.+.+.+.|+|. +...... ...++....+. ...+.|.|.+++
T Consensus 7 ~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~~L~I~~v~ 85 (246)
T 4dzb_B 7 HPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHAS-LTLSTLTVTSAH 85 (246)
T ss_dssp ECSEEEEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEE-TTEEEEEECSCC
T ss_pred CCcEEEEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecC-CCEEEEEECCCC
Confidence 34556788999999999999888889999982 2111111 00122221110 112479999999
Q ss_pred CCCceeEEEEEEcCCC----cceEEEEEEEecCCCCCCCCCCCCeee-cCCccccccCCCCcEEEEEEEeccCCC--cee
Q psy7036 181 IEDAGKYKVTAKNELG----ESNATISLNFDSDDAPVPGEGTKPVFT-ERPVTKQSDDDLNDIVIECRLVGEPEP--TIS 253 (254)
Q Consensus 181 ~~d~G~y~C~~~~~~~----~~~~~~~~~v~~~~~~~~~~~~~p~~~-~~~~~~~~~~g~~~~~l~C~~~~~p~p--~~~ 253 (254)
.+|+|.|.|.+.+..+ .......+.|..... ...+|.+. ..+....+.+|+ .+.|.|.+.|.|++ .++
T Consensus 86 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~----~~~~P~i~~~~~~~~~~~~g~-~v~L~C~~~g~~p~~~~v~ 160 (246)
T 4dzb_B 86 PEDSSFYICSARTSGDFGEQFFGPGTRLTVLEDLK----NVFPPEVAVFEPSEAEISHTQ-KATLVCLATGFYPDHVELS 160 (246)
T ss_dssp GGGCEEEEEEECCSSGGGCCEECCCEEEEEESCGG----GCBCCEEEEECCCHHHHHHHS-EEEEEEEEEEEBSSCEEEE
T ss_pred HHHCEEEEEEEecCCCCcceEEcCCEEEEEecCCC----cccCCceEeecCCchhccCCC-cEEEEEEEccCcCCceEEE
Confidence 9999999999987643 122334555553110 11244443 344544566688 99999999997664 788
Q ss_pred C
Q psy7036 254 W 254 (254)
Q Consensus 254 W 254 (254)
|
T Consensus 161 W 161 (246)
T 4dzb_B 161 W 161 (246)
T ss_dssp E
T ss_pred E
Confidence 8
No 437
>4f9l_D 20.1 anti-BTN3A1 antibody fragment; B7 superfamily, butyrophilin, CD277, immune system; HET: NAG; 3.14A {Mus musculus}
Probab=99.53 E-value=5.8e-13 Score=93.46 Aligned_cols=180 Identities=15% Similarity=0.242 Sum_probs=101.8
Q ss_pred eeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeC--CE---Ee-e------eCCcceEEEeecCCcceEEEEEEeccC
Q psy7036 10 SFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRG--ET---QL-S------EDTRTVMKTTPIGTNKYLVALELDDVI 77 (254)
Q Consensus 10 ~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~--~~---~~-~------~~~~~~~~~~~~~~~~~~~~l~i~~~~ 77 (254)
.+++.|..+.+.+|+.|+|+|.+...-...+.||+. |+ .+ . ..-..++.....+ ...+|.|.+++
T Consensus 3 vlTQsP~sls~s~G~~vtisC~~S~~i~~y~~WyqQ~pG~~P~lLiy~~s~~~sGvp~RFSgS~Sg---t~ftLtIs~lq 79 (259)
T 4f9l_D 3 VLTQSPSSLSASLGDTITITCHASQNINLWLSWYQQRPGNIPKLLIYRASNLHTGVPSRFSGSGSA---TGFTLTISSLQ 79 (259)
T ss_dssp CEEEECSBCCBCTTCEEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEET---TEEEEEEESCC
T ss_pred CEEccCCeEEECCCCCEEEEEEcCCCCCCCEEEEEECCCCCCEEEEECCCccCCCCCCCEEeeccC---CeEEEEEcccC
Confidence 356778888999999999999986444445899962 32 11 1 1111122211111 13479999999
Q ss_pred CCCCeEEEEEEEcCCCc-eEEEEEEEEecccc----CCCCCcc------------ccCCCeeeecCCCeEEEEEEEeeCC
Q psy7036 78 ETDAGLYKVKAKNKMGE-VAASINLNFSREQI----DGLAPTF------------LKKPSIRQEDDGKRLLFECRIQADP 140 (254)
Q Consensus 78 ~~d~G~Y~C~~~~~~~~-~~~~~~l~v~~~~~----~~~~~~~------------~~~~~~~~~~~g~~~~l~C~~~~~~ 140 (254)
.+|++.|.|........ --....|.|.+..- ...++.. +.......+.+|..+.|.|.+.|+.
T Consensus 80 ~eD~A~YyC~~~~~~~~tFG~GTkLeikr~~aa~~~s~~~~s~~a~ssGv~sqvqL~eSG~~lvkPG~Sl~LSC~aSG~t 159 (259)
T 4f9l_D 80 PEDIATYYCQQGHSYPYTFGGGTKLDIKRADAGGGGSGGGGSGGGGSGGGGSQVQLQESGAELVKPGASVKLSCKASGYT 159 (259)
T ss_dssp GGGCEEEEEEECSSSSCCBCCCCEECBCCC----------------------CCCEEEECCCEEESSSCEEEEEEEESSC
T ss_pred hhhCEEEEEeecCCCCCCccCCeEEEEeccccCccccccccccccccCCccccceEEeECCCEECCCCcEEEEEeeeCCC
Confidence 99999999987643211 01122333332100 0001100 1111123467899999999998864
Q ss_pred C--CeEEEEEC--CEe------cc---------cCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEE
Q psy7036 141 A--PTVIWSHS--GVQ------VK---------EDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAK 192 (254)
Q Consensus 141 ~--~~~~W~~~--~~~------~~---------~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~ 192 (254)
- -.+.|.|. |+. +. ..-+.++.+..+.......|.+.+++.+|.+.|.|...
T Consensus 160 fs~y~~~WvRQaPGkgLEwvg~I~~~~g~t~Ya~svkGRfTISrD~s~nt~yLqm~sL~~eDTAvYYCAr~ 230 (259)
T 4f9l_D 160 FTRYYLYWVKQRPGQGLEWIGEINPNNGGTKFNEKFKSKATLTVDKSSRTTYIQLSSLTSEDSAVYYCSRE 230 (259)
T ss_dssp GGGSCEEEEEECTTSCEEEEEEECTTTCCEEECTTSTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEE
T ss_pred cccCcEEEEEECCCCceEEEeEEeCCCCceEecHhhcCCEEEEEEccccEEEEEECCCChHHCEEEEEEEe
Confidence 3 24778763 111 11 11122333333333334579999999999999999654
No 438
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.53 E-value=6.4e-14 Score=102.02 Aligned_cols=135 Identities=16% Similarity=0.209 Sum_probs=86.2
Q ss_pred CCeeeecCCCeEEEEEEEeeCC--CCeEEEEEC--CEecc---------------cCCcceEEEcCCCCceeeEEEEccC
Q psy7036 119 PSIRQEDDGKRLLFECRIQADP--APTVIWSHS--GVQVK---------------EDKRHKFSIDKDGHSYFASLEIIDV 179 (254)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~--~~~~~W~~~--~~~~~---------------~~~~~~~~~~~~~~~~~~~l~i~~~ 179 (254)
+..+.+.+|+.++|.|.+.+.+ .+.+.|+|. +..+. .....++....+.......|.|.++
T Consensus 8 p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 87 (253)
T 3uzq_A 8 SGAELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHLSSL 87 (253)
T ss_dssp CCCEEECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeeecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEEeCCC
Confidence 3456788999999999988754 678999983 11110 0001122222212112346999999
Q ss_pred CCCCceeEEEEEEcCCCcc-eEEEEEEEecCCCCC-----CCCCCCCeeecCCccccccCCCCcEEEEEEEeccCCC---
Q psy7036 180 TIEDAGKYKVTAKNELGES-NATISLNFDSDDAPV-----PGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEPEP--- 250 (254)
Q Consensus 180 ~~~d~G~y~C~~~~~~~~~-~~~~~~~v~~~~~~~-----~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p~p--- 250 (254)
+.+|+|.|.|.+.|..+.. .....+.|....... .....+|.+...|....+.+|+ .+.|.|.+.+.|.+
T Consensus 88 ~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~-~v~L~C~~~~~~~~~~~ 166 (253)
T 3uzq_A 88 TSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAVSLGQ-RATISCRASENVDRYGN 166 (253)
T ss_dssp CGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEECTTS-CEEEEEEESSCCEETTE
T ss_pred CcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEEeCCC-CEEEEEEecCccccCCC
Confidence 9999999999999865543 344556665320000 0011245666667777889999 99999999998876
Q ss_pred -ceeC
Q psy7036 251 -TISW 254 (254)
Q Consensus 251 -~~~W 254 (254)
.+.|
T Consensus 167 ~~v~W 171 (253)
T 3uzq_A 167 SFMHW 171 (253)
T ss_dssp ECEEE
T ss_pred cEEEE
Confidence 7888
No 439
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.53 E-value=4.2e-14 Score=99.28 Aligned_cols=119 Identities=18% Similarity=0.278 Sum_probs=80.2
Q ss_pred eeeecCCCeEEEEEEEee----CCCCeEEEEECCEecccCC----------cceEEEcCCCCceeeEEEEccCCCCCcee
Q psy7036 121 IRQEDDGKRLLFECRIQA----DPAPTVIWSHSGVQVKEDK----------RHKFSIDKDGHSYFASLEIIDVTIEDAGK 186 (254)
Q Consensus 121 ~~~~~~g~~~~l~C~~~~----~~~~~~~W~~~~~~~~~~~----------~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 186 (254)
.+.+..|+.+.|.|.+.+ .+.+.+.|++++..+.... ..+......+. ..|.|.+++.+|+|.
T Consensus 3 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~~~~~---~~L~I~~v~~~D~G~ 79 (201)
T 1dr9_A 3 HVTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNN---LSIVILALRPSDEGT 79 (201)
T ss_dssp EEEEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEESTTT---TEEEECSCCGGGCEE
T ss_pred eEEEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEccCCC---cEEEEecccchhCeE
Confidence 356778999999999853 3567899999987763110 01111111111 279999999999999
Q ss_pred EEEEEEcCCCcc-----eEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEe-ccCCCceeC
Q psy7036 187 YKVTAKNELGES-----NATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLV-GEPEPTISW 254 (254)
Q Consensus 187 y~C~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~-~~p~p~~~W 254 (254)
|+|.+.|..|.. ...+.|.|.... ..|.+.... ...|+ .+.|.|.+. |+|.|.++|
T Consensus 80 Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~-------~~p~~~~~~----~~~g~-~~~l~C~~~~g~P~p~i~W 141 (201)
T 1dr9_A 80 YECVVLKYEKDAFKREHLAEVTLSVKADF-------PTPSISDFE----IPTSN-IRRIICSTSGGFPEPHLSW 141 (201)
T ss_dssp EEEEEEECCTTSCEEEEEEEEEEEEECCC-------CCCEEEEEE----CSSTT-EEEEEEEEEEESSCEEEEE
T ss_pred EEEEEEcCCCCccccccccEEEEEEcCCC-------CCCceEecc----CCCCC-eEEEEEecCCccCCCEEEE
Confidence 999999987654 345666665421 134433211 13466 899999995 999999999
No 440
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.53 E-value=2.2e-13 Score=96.71 Aligned_cols=127 Identities=18% Similarity=0.294 Sum_probs=80.9
Q ss_pred eeeecCCCeEEEEEEEeeCC--CCeEEEEECC--Eec----cc----------CCcceEEEcCCCCceeeEEEEccCCCC
Q psy7036 121 IRQEDDGKRLLFECRIQADP--APTVIWSHSG--VQV----KE----------DKRHKFSIDKDGHSYFASLEIIDVTIE 182 (254)
Q Consensus 121 ~~~~~~g~~~~l~C~~~~~~--~~~~~W~~~~--~~~----~~----------~~~~~~~~~~~~~~~~~~l~i~~~~~~ 182 (254)
...+.+|+.+.|.|.+.+.+ .+.+.|+|+. ... .. ....++....+.....+.|.|.+++.+
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 88 (215)
T 1c5d_H 9 PGLVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSLQTE 88 (215)
T ss_dssp CCEECTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSCCGG
T ss_pred CeeecCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCCCcc
Confidence 45677899999999998764 4689999863 111 00 011222222111112248999999999
Q ss_pred CceeEEEEEEcCCCc---ceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEecc-CCC-ceeC
Q psy7036 183 DAGKYKVTAKNELGE---SNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGE-PEP-TISW 254 (254)
Q Consensus 183 d~G~y~C~~~~~~~~---~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~-p~p-~~~W 254 (254)
|+|.|.|.+.+..+. ......|.|.... ..+|.+...+....+.+|+ .+.|.|.+.|. |.| .++|
T Consensus 89 D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~------~~~P~i~~~~~~~~~~~g~-~v~L~C~~~g~~P~p~~v~W 158 (215)
T 1c5d_H 89 DTAIYFCTREDGWNYFDYWGPGTMVTVSSAQ------TTAPSVYPLAPGCGDTTSS-TVTLGCLVKGYFPEPVTVTW 158 (215)
T ss_dssp GCEEEEEEECCSSSCSCCBCCCEEEEECSSC------CBCCCEEEECCCSSCCCCS-SEEEEEEEEEEBSSCCEEEE
T ss_pred cCEEEEEEEecCCcccceEcCCEEEEecCCC------CCCCeEEeccCChhhccCC-cEEEEEEEeeeEcCCcEEEE
Confidence 999999999986421 2233456665311 1244444332223456788 99999999987 888 8998
No 441
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.53 E-value=2.7e-14 Score=104.37 Aligned_cols=136 Identities=10% Similarity=0.076 Sum_probs=80.3
Q ss_pred ccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECC--Ee---cc-cC-------------CcceEEEcCCCCceeeEEEE
Q psy7036 116 LKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSG--VQ---VK-ED-------------KRHKFSIDKDGHSYFASLEI 176 (254)
Q Consensus 116 ~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~--~~---~~-~~-------------~~~~~~~~~~~~~~~~~l~i 176 (254)
...+..+.+.+|+.++|.|.+.+.+.+.+.|+|.. .. +. .. .+..... +.......|.|
T Consensus 6 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~~~L~I 83 (259)
T 3omz_A 6 EGRTKSVIRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTY--GSTRKNLRMIL 83 (259)
T ss_dssp -----CEEEETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEE--CC--CCCEEEE
T ss_pred ccCCceeEecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEee--cCCCCeEEEEE
Confidence 34445677889999999999988888899999831 11 00 00 0111111 11111237999
Q ss_pred ccCCCCCceeEEEEEEcCCC---cceEEEEEEEecCCCCCC-------CCCCCCeeecCCccccccCCCCcEEEEEEEec
Q psy7036 177 IDVTIEDAGKYKVTAKNELG---ESNATISLNFDSDDAPVP-------GEGTKPVFTERPVTKQSDDDLNDIVIECRLVG 246 (254)
Q Consensus 177 ~~~~~~d~G~y~C~~~~~~~---~~~~~~~~~v~~~~~~~~-------~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~ 246 (254)
.+++.+|+|.|.|.+.+..+ .......|.|........ .....|.+...|....+.+|+ .++|.|.+.+
T Consensus 84 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~-~v~L~C~~~~ 162 (259)
T 3omz_A 84 RNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSSVSMPVRK-AVTLNCLYET 162 (259)
T ss_dssp SSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCCCCEEEETTC-CEEECCEEEC
T ss_pred CCCCcccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeCCEEEEcCCC-CEEEEEECCC
Confidence 99999999999999998765 233345566654211110 001145677777777888999 9999999987
Q ss_pred c-CCCceeC
Q psy7036 247 E-PEPTISW 254 (254)
Q Consensus 247 ~-p~p~~~W 254 (254)
. |.+.+.|
T Consensus 163 ~~~~~~v~W 171 (259)
T 3omz_A 163 SWWSYYIFW 171 (259)
T ss_dssp CCSSCEEEE
T ss_pred ccCCceEEE
Confidence 5 7788888
No 442
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.53 E-value=1.3e-14 Score=100.44 Aligned_cols=115 Identities=11% Similarity=0.145 Sum_probs=79.0
Q ss_pred eeeecCCCeEEEEEEEeeCCCCeEEEEECCEeccc--CC----------cceEEEcCC-CCceeeEEEEccCCCCCceeE
Q psy7036 121 IRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKE--DK----------RHKFSIDKD-GHSYFASLEIIDVTIEDAGKY 187 (254)
Q Consensus 121 ~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~--~~----------~~~~~~~~~-~~~~~~~l~i~~~~~~d~G~y 187 (254)
.+.+.+|+.+.|.|.+.+.+.+.+.|++++..+.. .. ..++..... .......|.|.+++.+|+|.|
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y 83 (184)
T 2ny1_B 4 VVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTY 83 (184)
T ss_dssp EEEEETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEE
T ss_pred cEEEeCCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEEE
Confidence 45677899999999998888899999998753111 00 111111110 000123699999999999999
Q ss_pred EEEEEcCCCcceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEeccCCCceeC
Q psy7036 188 KVTAKNELGESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEPEPTISW 254 (254)
Q Consensus 188 ~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p~p~~~W 254 (254)
+|.+.|..+ .+.+.|.. +.. +....+.+|+ .+.|.|.+.+.|.|.++|
T Consensus 84 ~C~~~~~~~----~~~l~V~~-------------~~~-~~~~~v~~g~-~~~l~C~~~~~p~~~v~W 131 (184)
T 2ny1_B 84 ICEVEDQKE----EVQLLVFG-------------LTA-NSDTHLLQGQ-SLTLTLESPPGSSPSVQC 131 (184)
T ss_dssp EEEETTEEE----EEEEEEEE-------------EEE-SSCSEEETTC-CEEEEEECCTTCCCEEEE
T ss_pred EEEEEcCCC----cEEEEEEE-------------ecC-CCCceeecCC-CEEEEEEcCCCCCCEEEE
Confidence 999987644 34454442 112 2233567888 999999999999999998
No 443
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.53 E-value=1.5e-13 Score=85.62 Aligned_cols=90 Identities=21% Similarity=0.342 Sum_probs=67.0
Q ss_pred CCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEE
Q psy7036 112 APTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTA 191 (254)
Q Consensus 112 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~ 191 (254)
|+.+...+....+.+|+.+.|.|.+.+ +.+.+.|+|++..+......++....++. ...|.|.+++.+|+|.|+|.+
T Consensus 7 p~~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~l~~~~~~~~~~~~~~~--~~~L~I~~~~~~D~G~Y~C~a 83 (103)
T 1x44_A 7 GIMVTKQLEDTTAYCGERVELECEVSE-DDANVKWFKNGEEIIPGPKSRYRIRVEGK--KHILIIEGATKADAAEYSVMT 83 (103)
T ss_dssp SCCCSBCCCCEEEETTEEEEEEEECSS-SSCCCEEEETTEECCCSTTCSEEEEEETT--EEEEEEEEECTTTCSEEEEEE
T ss_pred CceeeccCCCEEEECCCCEEEEEEecC-CCCeEEEEECCEECCCCCceEEEEEEcCC--EEEEEECCCCcccCEEEEEEE
Confidence 344566666778889999999999976 67899999999998766532222222221 137999999999999999999
Q ss_pred EcCCCcceEEEEEEEec
Q psy7036 192 KNELGESNATISLNFDS 208 (254)
Q Consensus 192 ~~~~~~~~~~~~~~v~~ 208 (254)
.| ...+..|.|..
T Consensus 84 ~n----~~~~~~l~V~~ 96 (103)
T 1x44_A 84 TG----GQSSAKLSVDL 96 (103)
T ss_dssp TT----EEEEEEEEEEC
T ss_pred CC----CcEEEEEEEeC
Confidence 77 46666777765
No 444
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.53 E-value=2e-13 Score=97.80 Aligned_cols=127 Identities=18% Similarity=0.298 Sum_probs=79.3
Q ss_pred eeeecCCCeEEEEEEEeeCCC----CeEEEEECC--Eec----cc----------CCcceEEEcCCCCceeeEEEEccCC
Q psy7036 121 IRQEDDGKRLLFECRIQADPA----PTVIWSHSG--VQV----KE----------DKRHKFSIDKDGHSYFASLEIIDVT 180 (254)
Q Consensus 121 ~~~~~~g~~~~l~C~~~~~~~----~~~~W~~~~--~~~----~~----------~~~~~~~~~~~~~~~~~~l~i~~~~ 180 (254)
...+.+|+.++|.|.+.+.+. +.+.|+|+. ..+ .. ....++....+.......|.|.+++
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 88 (228)
T 3bae_H 9 PGLLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKITSVD 88 (228)
T ss_dssp CSEECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEECSCC
T ss_pred ceeecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEcCCC
Confidence 356778999999999988764 789999852 211 00 0111222221111112489999999
Q ss_pred CCCceeEEEEEEcCCC------c---ceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEecc-CCC
Q psy7036 181 IEDAGKYKVTAKNELG------E---SNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGE-PEP 250 (254)
Q Consensus 181 ~~d~G~y~C~~~~~~~------~---~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~-p~p 250 (254)
.+|+|.|.|.+.+..+ . ......|.|... ...+|.+...+....+.+|+ .+.|.|.+.|. |.|
T Consensus 89 ~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~------~~~~P~i~~~~~~~~~~~g~-~~~l~C~~~g~~P~p 161 (228)
T 3bae_H 89 TADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSA------KTTAPSVYPLAPVCGDTTGS-SVTLGCLVKGYFPEP 161 (228)
T ss_dssp GGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSC------CCBCCEEEEECC-----CCS-EEEEEEEEEEEBSSC
T ss_pred cccCEEEEEEEecCCCccccccceeeeCCcEEEEecCC------CCCCCEEEEecccccccCCC-CEEEEEEEccEeCCC
Confidence 9999999999998764 1 112355666531 11245554333223456788 99999999986 877
Q ss_pred -ceeC
Q psy7036 251 -TISW 254 (254)
Q Consensus 251 -~~~W 254 (254)
.++|
T Consensus 162 ~~v~W 166 (228)
T 3bae_H 162 VTLTW 166 (228)
T ss_dssp CEEEE
T ss_pred EEEEE
Confidence 8988
No 445
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.52 E-value=2.2e-13 Score=97.51 Aligned_cols=129 Identities=16% Similarity=0.264 Sum_probs=77.4
Q ss_pred CCeeeecCCCeEEEEEEEeeCC--CCeEEEEECC--Eecc-----c--C--------CcceEEEcCCCCceeeEEEEccC
Q psy7036 119 PSIRQEDDGKRLLFECRIQADP--APTVIWSHSG--VQVK-----E--D--------KRHKFSIDKDGHSYFASLEIIDV 179 (254)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~--~~~~~W~~~~--~~~~-----~--~--------~~~~~~~~~~~~~~~~~l~i~~~ 179 (254)
+....+.+|+.++|.|.+.+.+ .+.+.|+|+. .... . . ...++....+.......|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (227)
T 1mju_H 7 PGAELVKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLSSL 86 (227)
T ss_dssp CSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeEEcCCCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEECCC
Confidence 3456788999999999998876 6789999863 2110 0 0 01122221111111248999999
Q ss_pred CCCCceeEEEEEEcCCCc-ceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEecc-CCC-ceeC
Q psy7036 180 TIEDAGKYKVTAKNELGE-SNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGE-PEP-TISW 254 (254)
Q Consensus 180 ~~~d~G~y~C~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~-p~p-~~~W 254 (254)
+.+|+|.|.|.+.+..+. ......|.|.... ..+|.+...+....+.+|+ .+.|.|.+.|. |.| .++|
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~------~~~P~v~~~~~~~~~~~g~-~v~L~C~~~g~~P~p~~v~W 157 (227)
T 1mju_H 87 TSDDSAVYYCANKLGWFPYWGQGTLVTVSAAK------TTAPSVYPLAPVCGDTSGS-SVTLGCLVKGYFPEPVTLTW 157 (227)
T ss_dssp CGGGCEEEEEEEEETTEEEECCCEEEEECSSC------CBCCEEEEECCCC-------CEEEEEEEEEEBSSCCEEEE
T ss_pred CcccCEEEEEEECCCCceEEcCcEEEEEcCCC------CCCCEEEEecCCccccCCC-cEEEEEEeecEeCCCeEEEE
Confidence 999999999999986421 1223456665311 1234444322223456788 99999999986 777 8988
No 446
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.52 E-value=4.8e-14 Score=99.49 Aligned_cols=123 Identities=14% Similarity=0.253 Sum_probs=74.6
Q ss_pred cCCCeEEEEEEEeeCC----CCeEEEEECCEecccCCcceEEEcCCCC-ceeeEEEEccCCCCCceeEEEEEEcCCCcce
Q psy7036 125 DDGKRLLFECRIQADP----APTVIWSHSGVQVKEDKRHKFSIDKDGH-SYFASLEIIDVTIEDAGKYKVTAKNELGESN 199 (254)
Q Consensus 125 ~~g~~~~l~C~~~~~~----~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~ 199 (254)
..|+.+.|.|.+.+.+ ...+.|+|++..+............++. ...+.|.|.....+|.|.|+|.|.|..+...
T Consensus 16 ~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~g~Y~C~a~n~~~~~~ 95 (207)
T 1l6x_A 16 MISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAP 95 (207)
T ss_dssp CTTSCCEEEEEEEEECSSSCCCEEEEEETTEEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSC
T ss_pred ecCCceEEEEEEecccCCCCCeEEEEEECCccccCcccCCceeccCCcEEEEEEEEEEHHHccCCceEEEEEEcCcCCcc
Confidence 6899999999998865 2489999999876533211111222232 1223344444444559999999999877653
Q ss_pred EEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEecc-CCC-ceeC
Q psy7036 200 ATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGE-PEP-TISW 254 (254)
Q Consensus 200 ~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~-p~p-~~~W 254 (254)
....+.+.. ....+|.+...+.......++ .+.|.|.+.|. |.+ .++|
T Consensus 96 ~~~~v~~~~------~~~~~P~v~~~~~~~~~~~~~-~~~L~C~~~g~~P~~~~v~W 145 (207)
T 1l6x_A 96 IEKTISKAK------GQPREPQVYTLPPSRDELTKN-QVSLTCLVKGFYPSDIAVEW 145 (207)
T ss_dssp EEEEECCCC------SCCBCCEEEEECCCGGGGGSS-EEEEEEEEEEEBSSCCEEEE
T ss_pred eEEEeccCC------CCCcCCEEEEECCChHHhcCC-cEEEEEEEeCeECCCeEEEE
Confidence 333332110 012245555443333345677 79999999985 543 7888
No 447
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.52 E-value=2.6e-14 Score=99.16 Aligned_cols=112 Identities=18% Similarity=0.345 Sum_probs=75.8
Q ss_pred ecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEcc-CCCCCceeEEEEEEcCCCcceEEE
Q psy7036 124 EDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIID-VTIEDAGKYKVTAKNELGESNATI 202 (254)
Q Consensus 124 ~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~-~~~~d~G~y~C~~~~~~~~~~~~~ 202 (254)
...|+.+.|.|.+.+ +. .+.|+|++..+.... ++ .|.|.+ ++.+|+|.|+|.|.|..|.....+
T Consensus 11 ~~~G~~v~L~C~~~~-~~-~i~W~k~g~~l~~~~--------~~-----~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~ 75 (186)
T 1jbj_A 11 SISGTSVELTCPLDS-DE-NLKWEKNGQELPQKH--------DK-----HLVLQDFSEVEDSGYYVCYTPASNKNTYLYL 75 (186)
T ss_dssp EEETTEEEEECSSCC-CT-TCEEEETTEEECSCC--------CS-----EEEEESCCTTTSCEEEEEECSSCCCCCCEEE
T ss_pred EeCCcEEEEEEeCCC-CC-ceEEEECCEECCCCC--------CC-----EEEECCCCccccCEEEEEEEEeCCCcEEEEE
Confidence 356999999999877 43 499999998876431 12 799999 999999999999999988866666
Q ss_pred EEEEecCCCCCCCC--------CCCCeeecC----Cc---cccccCCCCcEEEEEEEeccCCCceeC
Q psy7036 203 SLNFDSDDAPVPGE--------GTKPVFTER----PV---TKQSDDDLNDIVIECRLVGEPEPTISW 254 (254)
Q Consensus 203 ~~~v~~~~~~~~~~--------~~~p~~~~~----~~---~~~~~~g~~~~~l~C~~~~~p~p~~~W 254 (254)
.+.|....++.... ..+|.+... .. ...+.+|+ .+.|.|.+ |.|.++|
T Consensus 76 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~-~v~l~C~~---p~p~i~W 138 (186)
T 1jbj_A 76 KARVGSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDG-SVLLTCGL---TDKTIKW 138 (186)
T ss_dssp CCCCCSCCCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSC-EEEEECSS---SCSCEEE
T ss_pred EEEEecccccccccccccccccCCccccccccccccccccceecCCCC-eEEEEeeC---CCCeEEE
Confidence 55554322221000 001111100 00 11334788 99999998 8889998
No 448
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.52 E-value=2.3e-14 Score=105.17 Aligned_cols=122 Identities=16% Similarity=0.229 Sum_probs=81.7
Q ss_pred cCCCeeeecCCCeEEEEEEEe---eCCCCeEEEEECCEecccCC----------------cceEEEcCCCCceeeEEEEc
Q psy7036 117 KKPSIRQEDDGKRLLFECRIQ---ADPAPTVIWSHSGVQVKEDK----------------RHKFSIDKDGHSYFASLEII 177 (254)
Q Consensus 117 ~~~~~~~~~~g~~~~l~C~~~---~~~~~~~~W~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~l~i~ 177 (254)
..+..+.+.+|+.+.|.|.+. +.+.+.+.|++++....... ..++....+.......|.|.
T Consensus 10 ~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~ 89 (268)
T 3mj6_A 10 VSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGSLLLQ 89 (268)
T ss_dssp --CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCCEEEC
T ss_pred cCCCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEEEEEC
Confidence 344567788999999999987 56677899999654321110 01122211111112479999
Q ss_pred cCCCCCceeEEEEEEcCCCcc--eEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEE---eccCCCce
Q psy7036 178 DVTIEDAGKYKVTAKNELGES--NATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRL---VGEPEPTI 252 (254)
Q Consensus 178 ~~~~~d~G~y~C~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~---~~~p~p~~ 252 (254)
+++.+|+|.|+|.+.+..+.. ...+.|.|.. ..|....+.+|+ .+.|.|.+ .+.|.|.+
T Consensus 90 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~---------------~~p~~~~v~~G~-~v~L~C~~~~~~~~p~~~v 153 (268)
T 3mj6_A 90 DVQKADEGIYTCEIRLKNESMVMKKPVELWVLP---------------EEPRDLRVRVGD-TTQMRCSIQSTEEKRVTKV 153 (268)
T ss_dssp SCCGGGCEEEEEEEEETTCCCEEEEEEEEEEEC---------------CCCSEEEEETTC-CEEECCBCEESSSSCCCEE
T ss_pred CCCHhHCEEEEEEEEecCCcceEEEEEEEEEec---------------cCCCccccccCC-cEEEEEEecCCCCCCccce
Confidence 999999999999999876554 3444554431 123355677888 99999999 56788999
Q ss_pred eC
Q psy7036 253 SW 254 (254)
Q Consensus 253 ~W 254 (254)
+|
T Consensus 154 ~W 155 (268)
T 3mj6_A 154 NW 155 (268)
T ss_dssp EE
T ss_pred EE
Confidence 98
No 449
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=99.52 E-value=8.4e-14 Score=89.87 Aligned_cols=90 Identities=12% Similarity=0.250 Sum_probs=68.4
Q ss_pred eEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCEEee--------eCCcceEEEeecCCcceEEEEEEeccCCCCCe
Q psy7036 11 FTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLS--------EDTRTVMKTTPIGTNKYLVALELDDVIETDAG 82 (254)
Q Consensus 11 ~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G 82 (254)
++..+....+.+|++++|.|.+.+.|.+.+.|++++..+. ...++.+... .....+|.|.+++.+|+|
T Consensus 4 ~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~----~~~~~~L~I~~v~~~DsG 79 (124)
T 3rbg_A 4 LTNHTETITVEEGQTLTLKCVTSLRKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLLHH----SANQLSITVPNVTLQDEG 79 (124)
T ss_dssp CCCSEEEEEEETTSCEEEEEECCCCTTCEEEEECTTSCEEEETTEECSCSSCCEEEEE----ETTEEEEEESSCCGGGCE
T ss_pred ccCCCccEEEcCCCCEEEEeEEeccCCCEEEEECCCCeEEEEeccccccCCcEEEEeC----CCCEEEEEECCCChHHCE
Confidence 4456677889999999999999988899999998654321 2233333221 112348999999999999
Q ss_pred EEEEEEEcCCCceEEEEEEEEec
Q psy7036 83 LYKVKAKNKMGEVAASINLNFSR 105 (254)
Q Consensus 83 ~Y~C~~~~~~~~~~~~~~l~v~~ 105 (254)
.|+|.+.|. +.....+.|.|..
T Consensus 80 ~Y~C~a~n~-g~~~~~~~l~V~~ 101 (124)
T 3rbg_A 80 VYKCLHYSD-SVSTKEVKVIVLA 101 (124)
T ss_dssp EEEEEEESS-SEEEEEEEEEEEC
T ss_pred EEEEEEEcC-CCCcEEEEEEEEe
Confidence 999999998 8888888888863
No 450
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.52 E-value=1.2e-13 Score=99.81 Aligned_cols=134 Identities=16% Similarity=0.210 Sum_probs=81.5
Q ss_pred CCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCE--e---ccc-------CCcceEEEcCCCCceeeEEEEccCCCCCce
Q psy7036 118 KPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGV--Q---VKE-------DKRHKFSIDKDGHSYFASLEIIDVTIEDAG 185 (254)
Q Consensus 118 ~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~--~---~~~-------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G 185 (254)
.+..+.+.+|+.++|.|.+.+.+.+.+.|+|+.. . +.. ....++....++ ....|.|.+++.+|+|
T Consensus 7 ~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~L~I~~v~~~D~G 84 (242)
T 2znx_A 7 SPATLSVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSG--TDFTLSINSVETEDFG 84 (242)
T ss_dssp ECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEET--TEEEEEESSCCGGGCE
T ss_pred cCCeEEEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCC--CEEEEEECCCChHHCE
Confidence 3455678899999999999988888999998531 1 100 001112211111 1237999999999999
Q ss_pred eEEEEEEcCCCcc-eEEEEEEEecCCCC---CCCCCCCCeeecCCccccccCCCCcEEEEEEEeccC--CCceeC
Q psy7036 186 KYKVTAKNELGES-NATISLNFDSDDAP---VPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEP--EPTISW 254 (254)
Q Consensus 186 ~y~C~~~~~~~~~-~~~~~~~v~~~~~~---~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p--~p~~~W 254 (254)
.|.|.+.|..+.. .....|.|...... ......++.....+....+.+|+ .+.|.|.+.+.| .+.+.|
T Consensus 85 ~Y~C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~-~v~L~C~~~g~~~~~~~v~W 158 (242)
T 2znx_A 85 MYFCQQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKPSQ-TLSLTCSVTGDSITSDYXSX 158 (242)
T ss_dssp EEEEEECSSSSCEECCCEEEEEC---------------CCEEEEECCSEECTTS-CEEEEEEEESSCGGGSCEEE
T ss_pred EEEEeEecCCceEECCCEEEEEcCCCCCCcccccccccceeeecCCcceecCCC-eEEEEEEEEccccCCcceee
Confidence 9999999875431 23345666532110 00000122222233334588899 999999999876 467888
No 451
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.52 E-value=4.3e-13 Score=97.81 Aligned_cols=134 Identities=15% Similarity=0.241 Sum_probs=86.2
Q ss_pred cCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECC--Ee---cc----------cCCcceEEEcCCCCceeeEEEEccCCC
Q psy7036 117 KKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSG--VQ---VK----------EDKRHKFSIDKDGHSYFASLEIIDVTI 181 (254)
Q Consensus 117 ~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~--~~---~~----------~~~~~~~~~~~~~~~~~~~l~i~~~~~ 181 (254)
..+..+.+.+|+.++|.|.+.+.+.+.+.|+|.. .. +. ...+..+...... ...+|.|.+++.
T Consensus 8 q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~--~~~sL~I~~v~~ 85 (256)
T 3tf7_C 8 QPDARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSD--SSFHLRKASVHR 85 (256)
T ss_dssp CSCSEEEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTT--TEEEEEESSCCG
T ss_pred ecCceEEecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCC--CEEEEEECCCCc
Confidence 3445677889999999999999999999999842 11 00 0111111111111 124799999999
Q ss_pred CCceeEEEEEEcCCCcc----eEEEEEEEecCCC----------CCCCCCCCCeeecCCccccccCCCCcEEEEEEEecc
Q psy7036 182 EDAGKYKVTAKNELGES----NATISLNFDSDDA----------PVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGE 247 (254)
Q Consensus 182 ~d~G~y~C~~~~~~~~~----~~~~~~~v~~~~~----------~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~ 247 (254)
+|+|.|.|.+.|..+.. .....|.|..... .......+|.+...|....+.+|+ .++|.|.+.+.
T Consensus 86 ~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~-~v~L~C~~~~~ 164 (256)
T 3tf7_C 86 SDSAVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSPRNKVTVTGE-NVTLSCRQTNS 164 (256)
T ss_dssp GGCSEEEEEEECTTCTTCEEECCCEEEEEEC---------------------CCEEESCSEEEEETTC-CEEECEEECSC
T ss_pred ccCEEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecCCEEEEeCCC-cEEEEEEcCCC
Confidence 99999999999876522 2234556653100 000012356677777777788999 99999999877
Q ss_pred CCCceeC
Q psy7036 248 PEPTISW 254 (254)
Q Consensus 248 p~p~~~W 254 (254)
.|.+.|
T Consensus 165 -~~~v~W 170 (256)
T 3tf7_C 165 -HNYMYW 170 (256)
T ss_dssp -CSEEEE
T ss_pred -ceEEEE
Confidence 567887
No 452
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.51 E-value=1.3e-13 Score=97.84 Aligned_cols=126 Identities=17% Similarity=0.232 Sum_probs=79.9
Q ss_pred CCeeeecCCCeEEEEEEEeeCC--CCeEEEEECCE--ecc----------cCCcceEEEcCCCCceeeEEEEccCCCCCc
Q psy7036 119 PSIRQEDDGKRLLFECRIQADP--APTVIWSHSGV--QVK----------EDKRHKFSIDKDGHSYFASLEIIDVTIEDA 184 (254)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~--~~~~~W~~~~~--~~~----------~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 184 (254)
+....+.+|+.+.|.|.+.+.+ .+.+.|+|++. .+. .....++.....+ ..+.|.|.+++.+|+
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~L~I~~v~~~D~ 84 (216)
T 2xzc_L 7 PPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSG--TSATLGITGLQTGDE 84 (216)
T ss_dssp CSEEEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEET--TEEEEEECSCCGGGC
T ss_pred CCcEEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccC--CEEEEEECCCCcccC
Confidence 4567788999999999954433 57899998542 110 0001122221111 123799999999999
Q ss_pred eeEEEEEEcCCC--cceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEecc-CCC-ceeC
Q psy7036 185 GKYKVTAKNELG--ESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGE-PEP-TISW 254 (254)
Q Consensus 185 G~y~C~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~-p~p-~~~W 254 (254)
|.|+|.+.|..+ .......+.|.. ...+|.+...+.......|+ .+.|.|.+.|. |.| .++|
T Consensus 85 G~Y~C~~~~~~~~~~~~~~~~l~V~~-------~~~~P~v~~~~~~~~~~~g~-~v~L~C~~~g~~P~~~~v~W 150 (216)
T 2xzc_L 85 ADYYCGTWDSSLNPVFGGGTKLEIKR-------TVAAPSVFIFPPSDEQLKSG-TASVVCLLNNFYPREAKVQW 150 (216)
T ss_dssp EEEEEEEECTTSCEEEBCCEEEEECC-------CCBCCEEEEECCCHHHHHTT-EEEEEEEEEEEBSSCCEEEE
T ss_pred EEEEEEEEeCCCcceECCCEEEEEcC-------CCCCCceEEeCCChhhccCC-cEEEEEEEEeEcCCceEEEE
Confidence 999999999876 122334455542 11356665533333344688 99999999984 555 7988
No 453
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.51 E-value=5.3e-14 Score=101.40 Aligned_cols=124 Identities=15% Similarity=0.192 Sum_probs=80.9
Q ss_pred ecCCCeEEEEEEEeeC---CCC-eEEEEECCEecccCCcc-eEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcc
Q psy7036 124 EDDGKRLLFECRIQAD---PAP-TVIWSHSGVQVKEDKRH-KFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGES 198 (254)
Q Consensus 124 ~~~g~~~~l~C~~~~~---~~~-~~~W~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~ 198 (254)
+..|+.++|.|.+.+. |.+ .+.|++++..+...... ........+...+.|.|.+++.+|.|.|+|.+.|..+..
T Consensus 29 v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~ 108 (239)
T 1i1c_A 29 LGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLNGKTFKCKVNSGAFPA 108 (239)
T ss_dssp TTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECSSSSS
T ss_pred cccCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHccCCCeEEEEEecccCCC
Confidence 5689999999999886 666 89999988665422111 011111122334689999999999999999999988765
Q ss_pred eEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEecc-CC-CceeC
Q psy7036 199 NATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGE-PE-PTISW 254 (254)
Q Consensus 199 ~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~-p~-p~~~W 254 (254)
.....+.+.. ....+|.+...+.......|+ .+.|.|.+.|. |. ..++|
T Consensus 109 ~~~~~v~~~~------~~~~~P~v~v~~~~~~~~~g~-~~~L~C~~~g~~P~~~~v~W 159 (239)
T 1i1c_A 109 PIEKSISKPE------GTPRGPQVYTMAPPKEEMTQS-QVSITCMVKGFYPPDIYTEW 159 (239)
T ss_dssp CEEEEECCCS------SCCBCCEEEEECCCGGGGGSS-EEEEEEEEEEEBSSCCEEEE
T ss_pred CcEEEEecCC------CCCcCCEEEEECCChHHhcCC-cEEEEEEEeeeECCCeEEEE
Confidence 3333332100 112356665444433344577 89999999985 55 36888
No 454
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.51 E-value=3e-13 Score=96.53 Aligned_cols=127 Identities=17% Similarity=0.261 Sum_probs=80.6
Q ss_pred eeeecCCCeEEEEEEEeeCC--CCeEEEEECC--Ee---cc------------cCCcceEEEcCCCCceeeEEEEccCCC
Q psy7036 121 IRQEDDGKRLLFECRIQADP--APTVIWSHSG--VQ---VK------------EDKRHKFSIDKDGHSYFASLEIIDVTI 181 (254)
Q Consensus 121 ~~~~~~g~~~~l~C~~~~~~--~~~~~W~~~~--~~---~~------------~~~~~~~~~~~~~~~~~~~l~i~~~~~ 181 (254)
.+.+.+|+.++|.|.+.+.+ .+.+.|+|.. .. +. .....++....+.......|.|.+++.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 88 (223)
T 1dee_B 9 GGVVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSLRA 88 (223)
T ss_dssp CCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECSCCG
T ss_pred CEEEcCCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECCCCH
Confidence 45678899999999998765 4689999853 11 10 001112222211111124799999999
Q ss_pred CCceeEEEEEEcCCC------cceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEecc-CCC-cee
Q psy7036 182 EDAGKYKVTAKNELG------ESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGE-PEP-TIS 253 (254)
Q Consensus 182 ~d~G~y~C~~~~~~~------~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~-p~p-~~~ 253 (254)
+|+|.|.|.+.+..+ .......|.|.... ..+|.+...+....+.+|+ .+.|.|.+.+. |.| .++
T Consensus 89 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~------~~~P~i~~~~~~~~~~~g~-~v~L~C~~~g~~P~p~~v~ 161 (223)
T 1dee_B 89 EDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGS------ASAPTLFPLVSCENSNPSS-TVAVGCLAQDFLPDSITFS 161 (223)
T ss_dssp GGCEEEEEEEESSSSTTCCEEEECCCEEEEECSSC------CBCCEEEEEECTTCCCSSS-EEEEEEEEEEEBSSCCEEE
T ss_pred HHCEEEEEEEeccccCcccceeecCcEEEEEccCC------CCCCEEEEecCCcccCCCC-cEEEEEEEEEEeCCCeEEE
Confidence 999999999998753 11123456665311 1245554322222456788 99999999987 777 898
Q ss_pred C
Q psy7036 254 W 254 (254)
Q Consensus 254 W 254 (254)
|
T Consensus 162 W 162 (223)
T 1dee_B 162 W 162 (223)
T ss_dssp E
T ss_pred e
Confidence 8
No 455
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.51 E-value=4.9e-14 Score=101.18 Aligned_cols=128 Identities=14% Similarity=0.168 Sum_probs=81.8
Q ss_pred CCeeeecCCCeEEEEEEEeeC-CC-C-eEEEEECCEec-ccCCcceEEEcCCC-CceeeEEEEccCCCCCceeEEEEEEc
Q psy7036 119 PSIRQEDDGKRLLFECRIQAD-PA-P-TVIWSHSGVQV-KEDKRHKFSIDKDG-HSYFASLEIIDVTIEDAGKYKVTAKN 193 (254)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~-~~-~-~~~W~~~~~~~-~~~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~G~y~C~~~~ 193 (254)
+....+..|+.+.|.|.+.++ |. + .+.|+++|..+ ..... ......++ +...+.|.|.++..+|.|.|+|.+.|
T Consensus 20 p~~~~v~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~~~-~~~~~~~g~~~~~s~L~I~~~~~~D~g~Y~C~~~~ 98 (231)
T 2w59_A 20 PSPGELYISLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPDPM-VLQEHFNGTYSASSAVPVSTQDWLSGERFTCTVQH 98 (231)
T ss_dssp CCHHHHHTSCCCEEEEEEEEESCCTTCEEEEECSSSSCCCCCCC-EEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEEC
T ss_pred cChhhcccCCceEEEEEEeCccCCCCeEEEEEcCCeeccccccc-cceECCCCcEEEEEEEEecchhccCCCEEEEEEEc
Confidence 344456689999999999885 63 4 99999998876 32221 11122222 23345799999999999999999999
Q ss_pred CCCcceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEecc-CC-CceeC
Q psy7036 194 ELGESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGE-PE-PTISW 254 (254)
Q Consensus 194 ~~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~-p~-p~~~W 254 (254)
..+.......+.+... ...+|.+...+.......++ .+.|.|.+.|. |. +.++|
T Consensus 99 ~~~~~~~~~~v~~~~~------~~~~P~v~v~~~~~~~~~~~-~~~L~C~~~g~~P~~~~v~W 154 (231)
T 2w59_A 99 EELPLPLSKSVYRNTG------PTTPPLIYPFAPHPEELSLS-RVTLSCLVRGFRPRDIEIRW 154 (231)
T ss_dssp TTCSSCEEEEECCCCS------CCBCCEEEEECCCGGGGGSS-EEEEEEEEEEEBSSCCEEEE
T ss_pred CCCCCceEEEEecCCC------CCcCCEEEEeCCCHHHhccC-ceEEEEEEEeccCCCcEEEE
Confidence 8765444444332100 11245444322222224467 89999999996 43 67888
No 456
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.51 E-value=2.4e-13 Score=82.66 Aligned_cols=80 Identities=16% Similarity=0.365 Sum_probs=64.3
Q ss_pred cccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcC
Q psy7036 115 FLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNE 194 (254)
Q Consensus 115 ~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~ 194 (254)
+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+..... ..|.|.+++.+|+|.|+|.+.|.
T Consensus 6 i~~~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~-------------~~L~i~~v~~~d~G~Y~C~a~n~ 72 (91)
T 3bfo_A 6 ICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHETK-------------KLYMVPYVDLEHQGTYWCHVYND 72 (91)
T ss_dssp EEECCCCEEECTTSCEEEECEEECSSCCEEEEEETTEECTTCCS-------------SEEEESSCCGGGCEEEEEEEECS
T ss_pred EEECCCccEecCCCcEEEEEEeccCCCCEEEEEcCCeeCCcCCC-------------CeEEECCCCHHhCEEEEEEEEcC
Confidence 33445556788999999999999999999999999988754321 17999999999999999999999
Q ss_pred CCcce-EEEEEEEe
Q psy7036 195 LGESN-ATISLNFD 207 (254)
Q Consensus 195 ~~~~~-~~~~~~v~ 207 (254)
.|... ..+.|.|.
T Consensus 73 ~g~~~s~~~~l~V~ 86 (91)
T 3bfo_A 73 RDSQDSKKVEIIID 86 (91)
T ss_dssp SCEEECCCEEEEEC
T ss_pred CCCEEeeeEEEEEe
Confidence 88643 45666664
No 457
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.51 E-value=2.8e-13 Score=98.43 Aligned_cols=136 Identities=20% Similarity=0.271 Sum_probs=83.2
Q ss_pred ccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCE-----ecc-------cCCcceEEEcCCCCceeeEEEEccCCCCC
Q psy7036 116 LKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGV-----QVK-------EDKRHKFSIDKDGHSYFASLEIIDVTIED 183 (254)
Q Consensus 116 ~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~-----~~~-------~~~~~~~~~~~~~~~~~~~l~i~~~~~~d 183 (254)
...+..+.+.+|+.++|.|.+.+.+.+.+.|+|+.. .+. .....++.....+ ....|.|.+++.+|
T Consensus 8 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~--~~~~L~I~~v~~~D 85 (250)
T 3esu_F 8 IQSTSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSG--TDYSLTISNLEQED 85 (250)
T ss_dssp ECSCSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEET--TEEEEEESSCCGGG
T ss_pred EecCCEEEeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCC--CEEEEEEccCChhh
Confidence 334556778899999999999999999999998531 110 0001111111111 12379999999999
Q ss_pred ceeEEEEEEcCCCcc-eEEEEEEEecCCCC---CC------CCCCCCeeecCCccccccCCCCcEEEEEEEeccC--CCc
Q psy7036 184 AGKYKVTAKNELGES-NATISLNFDSDDAP---VP------GEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEP--EPT 251 (254)
Q Consensus 184 ~G~y~C~~~~~~~~~-~~~~~~~v~~~~~~---~~------~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p--~p~ 251 (254)
+|.|.|.+.|..+.. .....+.|...... .+ ....++.+...+....+.+|+ .+.|.|.+.+.| .+.
T Consensus 86 ~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~-~v~L~C~~~~~~~~~~~ 164 (250)
T 3esu_F 86 IGTYFCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPELVKPGA-SVKISCKDSGYAFSSSW 164 (250)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEEC------------------------CEECCCEEECTTC-CEEEEEECCSTTGGGSE
T ss_pred CEEEEEEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCceEEcCCc-eEEEEEEecCCcccCCE
Confidence 999999999876542 23334555431000 00 000122233344555688899 999999999876 677
Q ss_pred eeC
Q psy7036 252 ISW 254 (254)
Q Consensus 252 ~~W 254 (254)
+.|
T Consensus 165 v~W 167 (250)
T 3esu_F 165 MNW 167 (250)
T ss_dssp EEE
T ss_pred EEE
Confidence 888
No 458
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.51 E-value=1.3e-13 Score=101.66 Aligned_cols=136 Identities=18% Similarity=0.224 Sum_probs=84.2
Q ss_pred ccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCE-----eccc-------CCcceEEEcCCCCceeeEEEEccCCCCC
Q psy7036 116 LKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGV-----QVKE-------DKRHKFSIDKDGHSYFASLEIIDVTIED 183 (254)
Q Consensus 116 ~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~-----~~~~-------~~~~~~~~~~~~~~~~~~l~i~~~~~~d 183 (254)
...+..+.+.+|+.++|.|.+.+.+.+.+.|+|++. .+.. ....++....++. ...|.|.+++.+|
T Consensus 16 ~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~~~L~I~~v~~~D 93 (276)
T 3auv_A 16 TQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGT--DFTLTISSLQPED 93 (276)
T ss_dssp EEECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETT--EEEEEESSCCGGG
T ss_pred EeCCCeEEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCC--eEEEEEccCChhh
Confidence 344556778899999999999988888999998642 1110 0011122211111 2379999999999
Q ss_pred ceeEEEEEEcCCCc-ceEEEEEEEecCCCC----CCCCCCCCeeecCCccccccCCCCcEEEEEEEeccC--CCceeC
Q psy7036 184 AGKYKVTAKNELGE-SNATISLNFDSDDAP----VPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEP--EPTISW 254 (254)
Q Consensus 184 ~G~y~C~~~~~~~~-~~~~~~~~v~~~~~~----~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p--~p~~~W 254 (254)
+|.|.|.+.|..+. ......|.|...+.. ......++.....|....+.+|+ .+.|.|.+.+.| .+.+.|
T Consensus 94 sG~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~-~v~L~C~~~g~~~~~~~v~W 170 (276)
T 3auv_A 94 FATYYCQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGG-SLRLSCAASGFTISDYWIHW 170 (276)
T ss_dssp CEEEEEEECSSSSCCCCCCEEEEC-----------------CCEEEEECCEEECTTC-CEEEEEEEESSCGGGSEEEE
T ss_pred CEEEEEEEecCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEecCCC-eEEEEEEecCccCCCCEEEE
Confidence 99999999987553 233345555532110 00000122223334566788999 999999999886 478888
No 459
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.51 E-value=2.5e-13 Score=96.24 Aligned_cols=126 Identities=14% Similarity=0.241 Sum_probs=83.0
Q ss_pred CCeeeecCCCeEEEEEEEeeCCCCe---EEEEECCEecccCC----------------cceEEEcCC-CCceeeEEEEcc
Q psy7036 119 PSIRQEDDGKRLLFECRIQADPAPT---VIWSHSGVQVKEDK----------------RHKFSIDKD-GHSYFASLEIID 178 (254)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~---~~W~~~~~~~~~~~----------------~~~~~~~~~-~~~~~~~l~i~~ 178 (254)
+..+.+..|+.+.|.|.+.+.+.+. +.|+|++..+.... ..++..... ......+|.|.+
T Consensus 6 p~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~ 85 (218)
T 4frw_A 6 SDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRN 85 (218)
T ss_dssp CSEEEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEESS
T ss_pred CCeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEee
Confidence 3557788999999999998887654 89999765432110 001111111 011124699999
Q ss_pred CCCCCceeEEEEEEcCCCcce-EEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEeccCCCceeC
Q psy7036 179 VTIEDAGKYKVTAKNELGESN-ATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEPEPTISW 254 (254)
Q Consensus 179 ~~~~d~G~y~C~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p~p~~~W 254 (254)
++.+|+|.|.|.+.+..+... ....+.+... ++.....+....+..++ .+.|.|.+.|.|.|.|+|
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~-~~~~~c~~~g~p~p~i~W 152 (218)
T 4frw_A 86 AVQADEGEYECRVSTFPAGSFQARLRLRVLVP---------PLPSLNPGPALEEGQGL-TLAASCTAEGSPAPSVTW 152 (218)
T ss_dssp CCGGGCEEEEEEEEEETTEEEEEEEEEEEEBC---------CCCEEEECSCEETTCCS-EEEEEEEEEEBSCCEEEE
T ss_pred ccHHHCCceeEEEEeccCceeeeEEEEEEeee---------ccceeeeeeeeeeeecc-ccceeeeccCCcCceEEE
Confidence 999999999999998766543 3333333321 12222334445667778 999999999999999999
No 460
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.51 E-value=3.4e-14 Score=100.63 Aligned_cols=127 Identities=18% Similarity=0.242 Sum_probs=82.1
Q ss_pred CCeeeecCCCeEEEEEEEeeCCCCeEEEEECC--Eecc----------cCCcceEEEcCCCCceeeEEEEccCCCCCcee
Q psy7036 119 PSIRQEDDGKRLLFECRIQADPAPTVIWSHSG--VQVK----------EDKRHKFSIDKDGHSYFASLEIIDVTIEDAGK 186 (254)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~--~~~~----------~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 186 (254)
+....+..|+.+.|.|.+.+.+.+.+.|+|+. ..+. .....++.....+ ....|.|.+++.+|+|.
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~L~I~~v~~~D~G~ 83 (212)
T 1nfd_E 6 PSSASVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSG--TTATLTISGAQPEDEAA 83 (212)
T ss_dssp CSEEEEETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEET--TEEEEEETTCCGGGCSE
T ss_pred CCeEEEeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeC--CEEEEEECcCCcccCEE
Confidence 45667889999999999877777789999853 2220 0001112111111 12379999999999999
Q ss_pred EEEEEEcCCCc---ceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEecc-CC-CceeC
Q psy7036 187 YKVTAKNELGE---SNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGE-PE-PTISW 254 (254)
Q Consensus 187 y~C~~~~~~~~---~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~-p~-p~~~W 254 (254)
|+|.+.|..+. ......+.|.... ..+|.+...+....+.+|+ .+.|.|.+.|. |+ |.++|
T Consensus 84 Y~C~~~n~~~~~~~~~~~~~l~V~~~~------~~~p~v~~~~~~~~~~~g~-~v~L~C~~~g~~p~~~~v~W 149 (212)
T 1nfd_E 84 YYCLSSYGDNNDLVFGSGTQLTVLRGP------KSSPKVTVFPPSPEELRTN-KATLVCLVNDFYPGSATVTW 149 (212)
T ss_dssp EEEEEEETTTTEEEECCCEEEEEECCC------CBCCEEECCCCCHHHHHTT-EECCCEEEEEEBSSCCEEEE
T ss_pred EEEEEEcccCcccccCCceEEEEccCC------CCCCEEEeeCCchHhccCC-ceEEEEEEEeeECCccEEEE
Confidence 99999973221 1223445554211 1256666544444556788 99999999987 55 68998
No 461
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.50 E-value=3.2e-14 Score=101.43 Aligned_cols=123 Identities=21% Similarity=0.314 Sum_probs=79.4
Q ss_pred eeecCCCeEEEEEEEeeCCC-----CeEEEEECCEecc-----------cCCcceEEEcCCC-CceeeEEEEccCCCCCc
Q psy7036 122 RQEDDGKRLLFECRIQADPA-----PTVIWSHSGVQVK-----------EDKRHKFSIDKDG-HSYFASLEIIDVTIEDA 184 (254)
Q Consensus 122 ~~~~~g~~~~l~C~~~~~~~-----~~~~W~~~~~~~~-----------~~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~ 184 (254)
+.+.+|+.+.|.|.+.+.+. +.+.|++++.... .....+.....+. ......|.|.+++.+|+
T Consensus 5 v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~D~ 84 (222)
T 4i0k_A 5 VVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVTDE 84 (222)
T ss_dssp CCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGGGC
T ss_pred EEEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCcccccC
Confidence 45678999999999887653 6799999864321 0111122221110 01123799999999999
Q ss_pred eeEEEEEEcCCCcceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEE-eccCCCceeC
Q psy7036 185 GKYKVTAKNELGESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRL-VGEPEPTISW 254 (254)
Q Consensus 185 G~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~-~~~p~p~~~W 254 (254)
|.|+|.+.+. +.....+.|.|.. ....|.+...+. ..+.+|+ .+.|.|.+ .+.|.|.++|
T Consensus 85 G~Y~C~~~~~-~~~~~~~~l~V~~-------~~~~p~i~~~~~-~~v~~G~-~~~l~C~~~~g~P~~~v~W 145 (222)
T 4i0k_A 85 GSYTCFVSIQ-DFDSAAVSLQVAA-------PYSKPSMTLEPN-KDLRPGN-MVTITCSSYQGYPEAEVFW 145 (222)
T ss_dssp SCEEEEEEEC-CCCCCCCCCCCCB-------CCCCCEEECCC------CCS-EEEEEEEEEEEBSCCEEEE
T ss_pred EEEEEEEEeC-CCceEEEEEEEEc-------CCCCCcEEeCCC-ceecCCc-eEEEEEecccccCCCeEEE
Confidence 9999999985 3334444454442 123456665553 3566788 99999999 8899999998
No 462
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.50 E-value=2.3e-13 Score=98.96 Aligned_cols=126 Identities=18% Similarity=0.236 Sum_probs=81.8
Q ss_pred CCeeeecCCCeEEEEEEEeeCC-----CCeEEEEECCE--ec---c-------cCCcceEEEcCCCCceeeEEEEccCCC
Q psy7036 119 PSIRQEDDGKRLLFECRIQADP-----APTVIWSHSGV--QV---K-------EDKRHKFSIDKDGHSYFASLEIIDVTI 181 (254)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~-----~~~~~W~~~~~--~~---~-------~~~~~~~~~~~~~~~~~~~l~i~~~~~ 181 (254)
+..+.+.+|+.++|.|.+.+.+ .+.+.|+|++. .. . .....++.....+ ....|.|.+++.
T Consensus 41 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~L~I~~v~~ 118 (252)
T 3bkj_L 41 PLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSG--TDFTLRISRVEA 118 (252)
T ss_dssp CSEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET--TEEEEEESSCCG
T ss_pred CceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccC--CEEEEEECCCCc
Confidence 4566788999999999998887 57899999641 11 0 0001112111111 123799999999
Q ss_pred CCceeEEEEEEcCCCcc-eEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEecc-CCC-ceeC
Q psy7036 182 EDAGKYKVTAKNELGES-NATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGE-PEP-TISW 254 (254)
Q Consensus 182 ~d~G~y~C~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~-p~p-~~~W 254 (254)
+|+|.|+|.+.|..+.. .....+.|... ..+|.+...+....+.+|+ .+.|.|.+.|. |.+ .++|
T Consensus 119 ~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~-------~~~P~v~~~~~~~~~~~g~-~v~L~C~~~g~~p~~~~v~W 186 (252)
T 3bkj_L 119 EDLGVYYCFQASLVPLTFGAGTKLELKRA-------DAAPTVSIFPPSSEQLTSG-GASVVCFLNNFYPKDINVKW 186 (252)
T ss_dssp GGCEEEEEEECSBSSCEECCCEEEEECCC-------CBCCEEEEECCCHHHHHHT-EEEEEEEEEEEBSSCCEEEE
T ss_pred ccCEEEEEEEEcCCccEECCCEEEEEeCC-------CcCcEEEEeCCChhhcCCC-cEEEEEEEeeEeCCCcEEEE
Confidence 99999999999876532 22344556431 1245565544333445788 99999999985 544 6888
No 463
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.50 E-value=2.1e-13 Score=86.56 Aligned_cols=99 Identities=21% Similarity=0.370 Sum_probs=73.2
Q ss_pred eEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEE
Q psy7036 95 VAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASL 174 (254)
Q Consensus 95 ~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l 174 (254)
....+.|.|.. .+|.+...+....+.+|+.+.|.|.+.+. +.+.|+|++..+....+..+... +. ...|
T Consensus 7 ~~~~~~l~V~~-----~pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~l~~~~~~~~~~~--~~--~~~L 75 (113)
T 2edh_A 7 GRTSAMLTVRA-----LPIKFTEGLRNEEATEGATAVLRCELSKM--APVEWWKGHETLRDGDRHSLRQD--GA--RCEL 75 (113)
T ss_dssp CCCCCCCCCCC-----SCCCEEECCCCCEECTTSCEEEEEEESSC--CCCEEEESSSBCCCSSSEEEEEE--TT--EEEE
T ss_pred CcEEEEEEEEc-----CCCcccccCCceEEeCCCeEEEEEEECCC--CcEEEEECCEECCCCCcEEEEEC--CC--EEEE
Confidence 34445556542 44566666667788999999999999665 67999999998876655444332 21 2379
Q ss_pred EEccCCCCCceeEEEEEEcCCCcceEEEEEEEec
Q psy7036 175 EIIDVTIEDAGKYKVTAKNELGESNATISLNFDS 208 (254)
Q Consensus 175 ~i~~~~~~d~G~y~C~~~~~~~~~~~~~~~~v~~ 208 (254)
.|.+++.+|+|.|+|.+ +.......|.|..
T Consensus 76 ~I~~v~~~D~G~Y~C~a----~~~~~~~~l~V~~ 105 (113)
T 2edh_A 76 QIRGLVAEDAGEYLCMC----GKERTSAMLTVRA 105 (113)
T ss_dssp EECSCCSTTCEEEEEEE----TTEEEEEEEEECC
T ss_pred EECCCChhhCEEEEEEe----CCCCEEEEEEEeC
Confidence 99999999999999999 6667777787764
No 464
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.50 E-value=2.9e-14 Score=90.77 Aligned_cols=90 Identities=17% Similarity=0.326 Sum_probs=68.8
Q ss_pred CCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEE
Q psy7036 112 APTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTA 191 (254)
Q Consensus 112 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~ 191 (254)
++.+...+....+.+|+.+.|.|.+.+.|.+.+.|+|++..+.......+.....+. ..|.|.++..+|+|.|+|.+
T Consensus 13 p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~---~~L~I~~v~~~D~G~Y~C~~ 89 (115)
T 2cr6_A 13 RVHIIEDLEDVDVQEGSSATFRCRISPANYEPVHWFLDKTPLHANELNEIDAQPGGY---HVLTLRQLALKDSGTIYFEA 89 (115)
T ss_dssp CCEEEECCCEEEEETTSCEECCCEEESTTCCSCEEEESSCEECCSSSCCBCCBTTTB---CCBEECSCCTTTCEEEEEEE
T ss_pred CCeEeccCccEEEeCCCcEEEEEEEcCCCCCccEEEECCEECCCCCcEEEEEcCCCE---EEEEEcCCChhhCEEEEEEE
Confidence 345555667788899999999999999999999999999988766544433221221 27999999999999999993
Q ss_pred EcCCCcceEEEEEEEec
Q psy7036 192 KNELGESNATISLNFDS 208 (254)
Q Consensus 192 ~~~~~~~~~~~~~~v~~ 208 (254)
|.......|.|..
T Consensus 90 ----g~~~~~~~L~V~~ 102 (115)
T 2cr6_A 90 ----GDQRASAALRVTE 102 (115)
T ss_dssp ----TTEECCEEEEEEC
T ss_pred ----CCeeEEEEEEEEC
Confidence 5566667777774
No 465
>2eys_A NKT15; natural killer T cell receptor, immune system; 2.21A {Homo sapiens} PDB: 2eyr_A 2eyt_A 3huj_E* 3tyf_A 3tzv_A* 3sdx_E* 2po6_C* 2cde_A 3to4_C*
Probab=99.50 E-value=6e-13 Score=93.67 Aligned_cols=165 Identities=12% Similarity=0.199 Sum_probs=98.7
Q ss_pred eeEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCC-----EEe-e--e------CCcceEEEeecCCcceEEEEEEec
Q psy7036 10 SFTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGE-----TQL-S--E------DTRTVMKTTPIGTNKYLVALELDD 75 (254)
Q Consensus 10 ~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~-----~~~-~--~------~~~~~~~~~~~~~~~~~~~l~i~~ 75 (254)
.+++.|..+.+.+|++|+|.|.+.+.....+.|||.. ..+ . . ..++..... .......|.|.+
T Consensus 5 ~v~Q~p~~~~v~~G~svtL~C~~s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~---~~~~~~sL~I~~ 81 (210)
T 2eys_A 5 QVEQSPQSLIILEGKNCTLQCNYTVSPFSNLRWYKQDTGRGPVSLTIMTFSENTKSNGRYTATLD---ADTKQSSLHITA 81 (210)
T ss_dssp CEEEECSEEEEETTCCEEEEEEECCSSCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEE---TTTTEEEEEESS
T ss_pred eEEEeCCEEEEecCCCEEEEEEECCCCCCeEEEEEeCCCCCCEEEEEEecCCCCccCCCEEEEEc---CCCCEEEEEEcc
Confidence 4567788889999999999999976666689999842 122 1 1 112222111 122345899999
Q ss_pred cCCCCCeEEEEEEEcCC---CceE--EEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECC
Q psy7036 76 VIETDAGLYKVKAKNKM---GEVA--ASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSG 150 (254)
Q Consensus 76 ~~~~d~G~Y~C~~~~~~---~~~~--~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~ 150 (254)
++.+|+|.|.|.+.+.. +... ....|.|...... ..|.+..... ....++|.|.+.+++++ +.- .++
T Consensus 82 ~~~~Dsg~Y~C~~~~~~~~~~~~~fg~gt~L~V~~~~~~-~~P~V~~~~~-----~~~~~tl~Cl~~gf~P~-~~v-~~~ 153 (210)
T 2eys_A 82 SQLSDSASYICVVSDRGSTLGRLYFGRGTQLTVWPDIQN-PDPAVYQLRD-----SKSSDKSVCLFTDFDSQ-TNV-SQS 153 (210)
T ss_dssp CCGGGCEEEEEEEESCSSTTCCEEECCCEEEEEECCCSS-CCCEEEEECC-----CSSSSCEEEEEESCCTT-CCC-CCC
T ss_pred CCcccCceEEEEEEccCCCcccceECCCEEEEEECCCCC-CCCeEEecCC-----CCCCceEEEEcccccCC-cEe-ccc
Confidence 99999999999998742 1111 2346666532111 1222211111 12267899999987654 320 111
Q ss_pred EecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCC
Q psy7036 151 VQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELG 196 (254)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~ 196 (254)
...... .... ..|.+..+...+.|.|.|.+.|.++
T Consensus 154 -----~~~~~~-~t~~-----~~l~~~~~~~~~~~~~~w~~~~~~~ 188 (210)
T 2eys_A 154 -----KDSDVY-ITDK-----CVLDMRSMDFKSNSAVAWSNKSDFA 188 (210)
T ss_dssp -----SSTTEE-ECCC-----EEEEETTTTEEEEEEEEEECSTTCC
T ss_pred -----cCcceE-ccCc-----hhcchhcccccccchhhccCCCceE
Confidence 011111 1111 2677888888899999999887665
No 466
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.50 E-value=6.7e-13 Score=96.55 Aligned_cols=128 Identities=11% Similarity=0.157 Sum_probs=85.0
Q ss_pred CCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEE
Q psy7036 112 APTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTA 191 (254)
Q Consensus 112 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~ 191 (254)
+|.+...+. ..+.+|++++|.|.+.+ +.+.+.|+|++..+.... .............|.|.+++.+|+|.|+|.+
T Consensus 7 kP~i~~~P~-~~V~~G~~VtL~C~~~~-~~~~~~W~k~g~~~~~~~---~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a 81 (257)
T 1b6u_A 7 KPSLLAHPG-PLVKSEETVILQCWSDV-RFQHFLLHREGKFKDTLH---LIGEHHDGVSKANFSIGPMMQDLAGTYRCYG 81 (257)
T ss_dssp CCEECCBSC-SEEESSCCEEEEEEESS-CCSEEEEEEESTTCEEEE---EECBCCTTCEEEEEEECSCCTTTCEEEEEEE
T ss_pred CCEEEEcCC-CEecCCCCEEEEEecCC-CCcEEEEEECCCCCCcce---eeeeccCCCceEEEEeecCCcccCEEEEEeE
Confidence 444444443 45778999999999864 467899999986542110 0000001112347999999999999999999
Q ss_pred EcCCC-----cceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEeccCCCceeC
Q psy7036 192 KNELG-----ESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEPEPTISW 254 (254)
Q Consensus 192 ~~~~~-----~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p~p~~~W 254 (254)
.+... ..+..+.|.|... ...|.+...+. ..+.+|+ .++|.|.+.+.+ +.+.|
T Consensus 82 ~~~~~~~~~s~~S~~~~L~V~~~-------~~~P~l~~~p~-~~V~~G~-~vtL~C~~~~~~-~~~~w 139 (257)
T 1b6u_A 82 SVTHSPYQLSAPSDPLDIVITGL-------YEKPSLSAQPG-PTVLAGE-SVTLSCSSRSSY-DMYHL 139 (257)
T ss_dssp ECSSCTTSCCCCCCCEEEEEECS-------SCCCEEECSSC-TTCBTTC-EEEEEEECSSCC-SEEEE
T ss_pred eccCCCccccccCCCEEEecccC-------CCCcceEccCC-CccCCCC-EEEEEEeCCCCC-cEEEE
Confidence 86432 2245566666641 23567776665 3678899 999999998764 56776
No 467
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.49 E-value=9.4e-12 Score=103.93 Aligned_cols=171 Identities=13% Similarity=0.192 Sum_probs=112.9
Q ss_pred CCCeeEeCCCceeecCCCeEEEEEEEeeCCCCceE-EE--eCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeE
Q psy7036 7 FAPSFTQKPQLRQEDEGNRLIFECQLLCNPKPDIV-WF--RGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGL 83 (254)
Q Consensus 7 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~-W~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 83 (254)
.+|.|. .+....+.+|++++|.|.+.|.|.+.+. |+ ++|..+...... ..........|.|.++...|.|.
T Consensus 164 ~~p~~~-~~~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~~~~~-----~~~~~~~~~~l~I~~~~~~d~g~ 237 (731)
T 2v5y_A 164 RTPHFL-RIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIK-----VTSSRRFIASFNVVNTTKRDAGK 237 (731)
T ss_dssp SSCEEC-CCCCEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEEEEEEE-----ECCSSEEEEEEEECSCCTTTCEE
T ss_pred cccccc-cccceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCccccccceE-----EeccccceEEEEEcccccccCeE
Confidence 467776 5667889999999999999999999988 88 677766433211 11122234589999999999999
Q ss_pred EEEEEEcCCCc-eEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEeeC---CC-C--eEEEEECCEecccC
Q psy7036 84 YKVKAKNKMGE-VAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQAD---PA-P--TVIWSHSGVQVKED 156 (254)
Q Consensus 84 Y~C~~~~~~~~-~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~---~~-~--~~~W~~~~~~~~~~ 156 (254)
|+|.+.|..|. ......|.|.. +|.....+....+ ....+.|.|..... .+ . .+.|...+..
T Consensus 238 Y~c~A~n~~G~~~s~~~~l~V~~------~P~~~~~p~~~~~-~~~~v~l~w~~~~~~g~~~i~~Y~v~~~~~~~~---- 306 (731)
T 2v5y_A 238 YRCMIRTEGGVGISNYAELVVKE------PPVPIAPPQLASV-GATYLWIQLNANSINGDGPIVAREVEYCTASGS---- 306 (731)
T ss_dssp EEEEEEETTEEEECCCEEEEEEC------CCCBSSCCEEEEE-CSSCEEEECCCSSBSSCSCCCEEEEEEEESSSS----
T ss_pred EEEEEECCCCCcceeeEEEEEec------CCCCCCCcceecc-CCceEEEEeCCcccCCCCccEEEEEEEEECCCC----
Confidence 99999999987 66667777763 3332222222222 45667888764321 11 1 3555443211
Q ss_pred CcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEE--cCCCcceE
Q psy7036 157 KRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAK--NELGESNA 200 (254)
Q Consensus 157 ~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~--~~~~~~~~ 200 (254)
......... ..+.|.++...+...|+|.|. |..|....
T Consensus 307 -~~~~~~~~~-----~~~~i~~L~p~t~Y~~~V~A~~~N~~G~s~~ 346 (731)
T 2v5y_A 307 -WNDRQPVDS-----TSYKIGHLDPDTEYEISVLLTRPGEGGTGSP 346 (731)
T ss_dssp -CEEEEECCS-----SEEEECSCCTTCEEEEEEEEECSSTTCSCCB
T ss_pred -ceEEeccCc-----ceEEEeCCCCCCEEEEEEEEEecCCCccccC
Confidence 111111112 278999999988888999999 98886543
No 468
>1zxq_A ICAM-2, intercellular adhesion molecule-2; immunoglobulin fold, cell adhesion, glycoprotein, transmembr; HET: NAG; 2.20A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.49 E-value=8.2e-12 Score=85.24 Aligned_cols=163 Identities=11% Similarity=0.172 Sum_probs=101.1
Q ss_pred eeEeCCCceeecCCCeEEEEEEEeeCCCCc-eEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEEEE
Q psy7036 10 SFTQKPQLRQEDEGNRLIFECQLLCNPKPD-IVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKVKA 88 (254)
Q Consensus 10 ~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~-v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 88 (254)
.+.+.|+...|..|+++.|+|.+.. +.+. +.|.-.-. +... . .+.....|.|.+++ |.|.|.|.+
T Consensus 4 ~v~v~P~~~~V~~G~S~~l~Cs~~c-~~p~~~glet~l~------~~~~--~---~g~~w~~l~l~~vs--~~g~~~C~~ 69 (192)
T 1zxq_A 4 EVHVRPKKLAVEPKGSLEVNCSTTC-NQPEVGGLETSLN------KILL--D---EQAQWKHYLVSNIS--HDTVLQCHF 69 (192)
T ss_dssp CEEEESSEEEECTTEEEEEEEEESC-SSCSEEEEECSSE------EEEE--E---EETTEEEEEEEEEC--SCEEEEEEE
T ss_pred EEEEeCCCcEEeCCCcEEEEEECCC-CCccccccccccC------ceEE--c---CCCCeEEEEEeccc--cCCeeEEEE
Confidence 4567788888999999999999963 4443 44432111 0000 0 01122269999998 789999999
Q ss_pred EcCCCceEEEEEEEEeccccCCCCCc-cccCCCeeeecCCCeEEEEEEEee-CCCCe--EEEEECCEecccCCcceEEEc
Q psy7036 89 KNKMGEVAASINLNFSREQIDGLAPT-FLKKPSIRQEDDGKRLLFECRIQA-DPAPT--VIWSHSGVQVKEDKRHKFSID 164 (254)
Q Consensus 89 ~~~~~~~~~~~~l~v~~~~~~~~~~~-~~~~~~~~~~~~g~~~~l~C~~~~-~~~~~--~~W~~~~~~~~~~~~~~~~~~ 164 (254)
.-........+.|.|.. +|. .........+.+|+.++|.|.+.+ .|... +.|+++++.+.... +. ...
T Consensus 70 ~c~~~~~~~~~~itVy~------~P~~v~i~~~p~~~~~G~~~tL~C~v~~v~P~~~L~v~llrG~~~l~~~~-f~-~~~ 141 (192)
T 1zxq_A 70 TCSGKQESMNSNVSVYQ------PPRQVILTLQPTLVAVGKSFTIECRVPTVEPLDSLTLFLFRGNETLHYET-FG-KAA 141 (192)
T ss_dssp EETTEEEEEEEEEEECB------CCCCCEEEEESSEECTTSEEEEEEEECSCBCGGGEEEEEEETTEEEEEEE-CC-SST
T ss_pred ECCCcceEEEEEEEEEe------CCCCceEccCCccccCCCcEEEEEEeCCeECCCCcEEEEEcCCEEeeecc-cc-ccc
Confidence 87655666788888873 332 222211235678999999999885 55544 89999988874321 00 001
Q ss_pred CCCCceeeEEEEccCCCCCce-eEEEEEEcCC
Q psy7036 165 KDGHSYFASLEIIDVTIEDAG-KYKVTAKNEL 195 (254)
Q Consensus 165 ~~~~~~~~~l~i~~~~~~d~G-~y~C~~~~~~ 195 (254)
.........+.+. ++++|.| .|+|.|.-..
T Consensus 142 ~~~~~~tv~~~~~-~~r~D~g~~~sC~A~L~L 172 (192)
T 1zxq_A 142 PAPQEATATFNST-ADREDGHRNFSCLAVLDL 172 (192)
T ss_dssp TCTTCEEEEEEEE-CCGGGGGCEEEEEEEEEC
T ss_pred CcCcceEEEEEEe-cchhhCCceEEEEEEecC
Confidence 1112222334444 4555666 9999998766
No 469
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.49 E-value=1.9e-13 Score=85.37 Aligned_cols=89 Identities=15% Similarity=0.332 Sum_probs=66.4
Q ss_pred CCCccccCCCe---eeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeE
Q psy7036 111 LAPTFLKKPSI---RQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKY 187 (254)
Q Consensus 111 ~~~~~~~~~~~---~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y 187 (254)
.+|.+...+.. ..+.+|+.+.|.|.+.+.+.+ +.|+|++..+.......+..... ...|.|.+++.+|+|.|
T Consensus 6 ~~P~~~~~p~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~g~~~~~~~~~~~~~~~~----~~~L~I~~~~~~D~G~Y 80 (104)
T 2e6p_A 6 SGPVHILSPQDKVSLTFTTSERVVLTCELSRVDFP-ATWYKDGQKVEESELLVVKMDGR----KHRLILPEAKVQDSGEF 80 (104)
T ss_dssp SSSCCCCBCCSCEEEEEESSSCEECCEECSSTTCC-CEEEETTEECCCBTTBEEEEETT----EEEEEESSCCTTTCEEE
T ss_pred CCCCEEECCCCCccEEEeCCCcEEEEEEecCCCCc-cEEeeCCEECCCCCCEEEEeCCC----EEEEEECCCChhhCEEE
Confidence 34555444444 678899999999999999888 99999999887665554443222 13799999999999999
Q ss_pred EEEEEcCCCcceEEEEEEEec
Q psy7036 188 KVTAKNELGESNATISLNFDS 208 (254)
Q Consensus 188 ~C~~~~~~~~~~~~~~~~v~~ 208 (254)
+|.+.|..+ .+.|.|..
T Consensus 81 ~C~a~n~~~----~~~l~V~~ 97 (104)
T 2e6p_A 81 ECRTEGVSA----FFGVTVQD 97 (104)
T ss_dssp EEECSSCCC----CEEEEEEC
T ss_pred EEEECCceE----EEEEEEcC
Confidence 999988633 44555554
No 470
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.48 E-value=1.8e-13 Score=85.12 Aligned_cols=79 Identities=18% Similarity=0.416 Sum_probs=61.7
Q ss_pred CceeecCCCeEEEEEEEeeCCCCceEEEeCCEEeeeCCcceEEEeecCCcceEEEEEEeccCCCCCeEEEEEEEcCCCce
Q psy7036 16 QLRQEDEGNRLIFECQLLCNPKPDIVWFRGETQLSEDTRTVMKTTPIGTNKYLVALELDDVIETDAGLYKVKAKNKMGEV 95 (254)
Q Consensus 16 ~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~ 95 (254)
....+.+|++++|.|.+. .|.+.+.|+|++..+....++.+... + ....|.|.+++..|+|.|+|.+.+ .
T Consensus 19 ~~~~v~~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~~~~~~~~~--~---~~~~L~I~~~~~~D~G~Y~C~a~~----~ 88 (102)
T 2eo1_A 19 REVQAEAGASATLSCEVA-QAQTEVTWYKDGKKLSSSSKVRVEAV--G---CTRRLVVQQAGQAEAGEYSCEAGG----Q 88 (102)
T ss_dssp EEEEEETTCCEEECCBCS-CSSSCCEEEETTEECCCCSSEEEEEE--T---TEEEEEETTCCTTTCSCEEEEETT----E
T ss_pred ccEEEeCCCcEEEEEEec-CCCCceEEEECCEECCCCCCEEEEEc--C---CEEEEEECCCCcccCEEEEEEcCC----C
Confidence 345789999999999998 78899999999999877665544322 1 123799999999999999999854 3
Q ss_pred EEEEEEEEe
Q psy7036 96 AASINLNFS 104 (254)
Q Consensus 96 ~~~~~l~v~ 104 (254)
...+.|.|.
T Consensus 89 ~~~~~l~V~ 97 (102)
T 2eo1_A 89 QLSFRLQVA 97 (102)
T ss_dssp ECCEEEEEE
T ss_pred cEEEEEEEe
Confidence 445677775
No 471
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.48 E-value=3.1e-13 Score=87.00 Aligned_cols=88 Identities=16% Similarity=0.277 Sum_probs=63.1
Q ss_pred eeeecCCCeEEEEEEEeeC--CCCeEEEEECCEeccc----CCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcC
Q psy7036 121 IRQEDDGKRLLFECRIQAD--PAPTVIWSHSGVQVKE----DKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNE 194 (254)
Q Consensus 121 ~~~~~~g~~~~l~C~~~~~--~~~~~~W~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~ 194 (254)
.+.+.+|+.+.|.|.+.+. +.+.+.|++++..+.. ................+.|.|.+++.+|+|.|+|.|.|.
T Consensus 17 ~v~v~~G~~v~L~C~~~g~p~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 96 (122)
T 3s35_X 17 GIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSG 96 (122)
T ss_dssp CEEEEETCCEEEEEEEEECTTCCCEEEEECSCTTCCHHHHBCCSCCEEEETTEEEEEEEEEESSCCGGGCEEEEEEEECS
T ss_pred CEEEecCCeEEEEEEEEcCCCCcEEEEEECCCcccCCceeeeeccccccCCceeeEEEEEEECCCCcccCEEEEEEEccC
Confidence 3467789999999999984 4568999998874321 111111111111112347999999999999999999999
Q ss_pred CCcceEEEEEEEec
Q psy7036 195 LGESNATISLNFDS 208 (254)
Q Consensus 195 ~~~~~~~~~~~v~~ 208 (254)
.|.....+.|.|..
T Consensus 97 ~g~~~~~~~l~V~~ 110 (122)
T 3s35_X 97 LMTKKNSTFVRVHE 110 (122)
T ss_dssp SCEEEEEEEEEEEE
T ss_pred CCceEEEEEEEEec
Confidence 99988888888875
No 472
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.48 E-value=2.5e-13 Score=84.67 Aligned_cols=90 Identities=18% Similarity=0.248 Sum_probs=69.1
Q ss_pred CCCccccCCCeeeecCCCeEEEEEEEeeCCC-CeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEE
Q psy7036 111 LAPTFLKKPSIRQEDDGKRLLFECRIQADPA-PTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKV 189 (254)
Q Consensus 111 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~-~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C 189 (254)
.++.+...+....+.+|+.+.|.|.+.+.+. +.+.|+|++..+....+..+...... ..|.|.+++.+|+|.|+|
T Consensus 7 ~p~~~~~~~~~~~v~~G~~v~l~C~v~~~~~~~~v~W~k~g~~i~~~~r~~~~~~~~~----~~L~I~~v~~~D~G~Y~C 82 (104)
T 2eny_A 7 GHVGITKRLKTMEVLEGESCSFECVLSHESASDPAMWTVGGKTVGSSSRFQATRQGRK----YILVVREAAPSDAGEVVF 82 (104)
T ss_dssp CCCCCSBCCCCEEEESSCCEEEEEECSSCCCSSCBCCBSSSSBCSBCSSCEEEEETTE----EEEEECSCCTTTCSCEEE
T ss_pred CCCEEEecCCCcEEcCCCcEEEEEEEcCCCCCceeEEEECCEECCCCCCEEEEEcCCE----EEEEECCCCHHHCEEEEE
Confidence 4556666677788999999999999988774 47999999998876665554433221 379999999999999999
Q ss_pred EEEcCCCcceEEEEEEEec
Q psy7036 190 TAKNELGESNATISLNFDS 208 (254)
Q Consensus 190 ~~~~~~~~~~~~~~~~v~~ 208 (254)
.+. +...+..|.|..
T Consensus 83 ~a~----~~~~~a~L~V~~ 97 (104)
T 2eny_A 83 SVR----GLTSKASLIVRE 97 (104)
T ss_dssp EET----TEEEEECEEEEC
T ss_pred EEC----CeeEEEEEEEeC
Confidence 884 355677777764
No 473
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.48 E-value=8.7e-13 Score=96.33 Aligned_cols=129 Identities=18% Similarity=0.284 Sum_probs=80.4
Q ss_pred CCeeeecCCCeEEEEEEEeeCC--CCeEEEEECC--Eecc----cC-----------CcceEEEcCCCCceeeEEEEccC
Q psy7036 119 PSIRQEDDGKRLLFECRIQADP--APTVIWSHSG--VQVK----ED-----------KRHKFSIDKDGHSYFASLEIIDV 179 (254)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~--~~~~~W~~~~--~~~~----~~-----------~~~~~~~~~~~~~~~~~l~i~~~ 179 (254)
+....+.+|+.++|.|.+.+.+ .+.+.|+|+. ..+. .. ...++....+.......|.|.++
T Consensus 13 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 92 (261)
T 2xqy_G 13 PGAELVKPGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLSSL 92 (261)
T ss_dssp CSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSC
T ss_pred CCCEEEcCCCCEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEcCC
Confidence 4456788999999999998876 5789999863 2110 00 01122221111111247999999
Q ss_pred CCCCceeEEEEEEcCCCc---ceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEecc-CCC-ceeC
Q psy7036 180 TIEDAGKYKVTAKNELGE---SNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGE-PEP-TISW 254 (254)
Q Consensus 180 ~~~d~G~y~C~~~~~~~~---~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~-p~p-~~~W 254 (254)
+.+|+|.|.|.+.+..+. ......|.|.... ..+|.+...+....+..|+ .+.|.|.+.+. |.| .++|
T Consensus 93 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~------~~~P~v~~~~p~~~v~~g~-~v~L~C~~~g~~P~~i~v~W 165 (261)
T 2xqy_G 93 TSEDSAVYYCGRLGYVYGFDYWGQGTTLTVSSAK------TTAPSVYPLAPVCGDTTGS-SVTLGCLVKGYFPEPVTLTW 165 (261)
T ss_dssp CGGGCEEEEEEEECTTSSEEEECCCEEEEECSSC------CBCCEEEEECCCCC--CCS-EEEEEEEEEEEBSSCCEEEE
T ss_pred CcccCeEEEEEEecCCCcceEECCCEEEEEccCC------CCCCeEEEeCCCccccCCC-cEEEEEEEEeEeCCCCEEEE
Confidence 999999999999986431 1123456665311 1244444322222456788 99999999985 776 7888
No 474
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.48 E-value=2.3e-13 Score=84.11 Aligned_cols=80 Identities=25% Similarity=0.457 Sum_probs=64.2
Q ss_pred CeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCcce
Q psy7036 120 SIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGESN 199 (254)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~ 199 (254)
....+..|+.+.|.|.+.+.| +.+.|+|++..+....... .. +. .|.|.+++.+|.|.|+|.|.|..|...
T Consensus 11 ~~~~v~~G~~v~L~C~~~g~p-p~i~W~k~g~~~~~~~~~~--~~-~~-----~L~i~~v~~~D~G~Y~C~a~n~~g~~~ 81 (99)
T 2cr3_A 11 ESFLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLAESNRTR--IT-GE-----EVEVQDSVPADSGLYACVTSSPSGSDT 81 (99)
T ss_dssp EECCBCTTSCEEEECCCCSSC-CEEEEEESSSBCCCCSSEE--EC-SS-----EEEETTCCTTTCEEEEEEEEETTEEEE
T ss_pred cCeEEeCCCcEEEEEEecCCC-CeEEEEECCEECCCCCcEE--EE-CC-----EEEEccCCHHHCEEEEEEEEeCCceEE
Confidence 445677899999999998876 7999999998775544322 22 22 799999999999999999999999887
Q ss_pred EEEEEEEec
Q psy7036 200 ATISLNFDS 208 (254)
Q Consensus 200 ~~~~~~v~~ 208 (254)
..+.|.|..
T Consensus 82 ~~~~l~V~~ 90 (99)
T 2cr3_A 82 TYFSVNVSD 90 (99)
T ss_dssp EEEEECBCS
T ss_pred EEEEEEEec
Confidence 777777654
No 475
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.48 E-value=9.3e-14 Score=95.70 Aligned_cols=114 Identities=15% Similarity=0.342 Sum_probs=80.3
Q ss_pred CeeeecCCCeEEEEEEEe--eCCCCeEEEEE--CCEeccc--------CCcceEEEcCCCCceeeEEEEccCCCCCceeE
Q psy7036 120 SIRQEDDGKRLLFECRIQ--ADPAPTVIWSH--SGVQVKE--------DKRHKFSIDKDGHSYFASLEIIDVTIEDAGKY 187 (254)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~--~~~~~~~~W~~--~~~~~~~--------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y 187 (254)
..+....|++++|.|... +.+.+.+.|++ ++..+.. ....++....++ +|.|.+++.+|+|.|
T Consensus 7 ~~v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ng-----sL~I~~v~~~DsG~Y 81 (182)
T 1hnf_A 7 LETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNG-----TLKIKHLKTDDQDIY 81 (182)
T ss_dssp EEEEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTTS-----CEEECSCCGGGCEEE
T ss_pred cEEEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCCC-----CEEECCCChhhCEEE
Confidence 445677899999999542 24456899999 8776521 012233344454 799999999999999
Q ss_pred EEEEEcCCCcce--EEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEeccCCCceeC
Q psy7036 188 KVTAKNELGESN--ATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEPEPTISW 254 (254)
Q Consensus 188 ~C~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p~p~~~W 254 (254)
+|.+.|..|... ..+.|.|... ...|.+.. .+. .+.|.|.+.+.|.|.++|
T Consensus 82 ~c~~~n~~g~~~~~~~~~L~V~~~-------~~~P~i~~--------~~~-~v~L~C~~~~~p~~~~~W 134 (182)
T 1hnf_A 82 KVSIYDTKGKNVLEKIFDLKIQER-------VSKPKISW--------TCI-NTTLTCEVMNGTDPELNL 134 (182)
T ss_dssp EEEEEETTSCEEEEEEEEEEEECC-------CCCCEEEE--------ETT-TTEEEEECSSCSSCEEEE
T ss_pred EEEEEeCCCceeEEEEEEEEEcCc-------CCCCEEEE--------ccC-cEEEEeEccCCCCCEEEE
Confidence 999999888653 4566777631 12344433 234 689999999999999998
No 476
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.48 E-value=2e-13 Score=85.51 Aligned_cols=90 Identities=24% Similarity=0.341 Sum_probs=68.3
Q ss_pred CCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEE
Q psy7036 111 LAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVT 190 (254)
Q Consensus 111 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~ 190 (254)
.+|.+...+....+..|+.+.|.|.+.+.+.+ +.|+|++..+....+..+..... ...|.|.+++.+|+|.|+|.
T Consensus 7 ~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~-v~W~k~g~~~~~~~~~~~~~~~~----~~~L~I~~v~~~D~G~Y~C~ 81 (106)
T 2dlt_A 7 GQLEVLQDIADLTVKAAEQAVFKCEVSDEKVT-GKWYKNGVEVRPSKRITISHVGR----FHKLVIDDVRPEDEGDYTFV 81 (106)
T ss_dssp CCCCEEECCCCEEEESSCCEECCCEESCSSCE-EEEEESSCBCCCCSSCEEEEETT----EEEEEESSCCTTTCSCEEEE
T ss_pred CCCEEecCCCCeEEeCCCeEEEEEEEcCCCcc-eEEEcCCEECcCCCCEEEEEeCC----EEEEEECCCCcCCCEEEEEE
Confidence 45666666777889999999999999888777 99999999887665554443221 13799999999999999999
Q ss_pred EEcCCCcceEEEEEEEe
Q psy7036 191 AKNELGESNATISLNFD 207 (254)
Q Consensus 191 ~~~~~~~~~~~~~~~v~ 207 (254)
+.|.. ...+..|.|.
T Consensus 82 a~n~~--~~~~~~l~V~ 96 (106)
T 2dlt_A 82 PDGYA--LSLSAKLNFL 96 (106)
T ss_dssp EETSC--CCCCBCEEEE
T ss_pred EccCC--ceEEEEEEEE
Confidence 99983 3334444444
No 477
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.48 E-value=2e-13 Score=85.05 Aligned_cols=89 Identities=18% Similarity=0.340 Sum_probs=69.0
Q ss_pred CCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEE
Q psy7036 111 LAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVT 190 (254)
Q Consensus 111 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~ 190 (254)
.+|.+...+....+..|+.+.|.|.+.+ +.+.+.|+|++..+.......+..... .+.|.|.+++.+|+|.|+|.
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~~~~~~~~~~~~~~~----~~~L~I~~v~~~D~G~Y~C~ 81 (103)
T 2edf_A 7 GPAAIIKPLEDQWVAPGEDVELRCELSR-AGTPVHWLKDRKAIRKSQKYDVVCEGT----MAMLVIRGASLKDAGEYTCE 81 (103)
T ss_dssp CCCCEEECCCCEEECTTSCEEECCEESS-SSCCCCEEESSCBCCCSSSEEEEEETT----EEEEEESSCCTTTCSEEEEE
T ss_pred CCcEEEecCCccEEcCCCCEEEEEEEeC-CCCcEEEEECCEEccCCCCEEEEECCC----EEEEEECCCCcccCEEEEEE
Confidence 4566666667788899999999999986 778899999998887655544433222 24799999999999999999
Q ss_pred EEcCCCcceEEEEEEEec
Q psy7036 191 AKNELGESNATISLNFDS 208 (254)
Q Consensus 191 ~~~~~~~~~~~~~~~v~~ 208 (254)
+.| ...++.|.|..
T Consensus 82 a~n----~~~~~~l~V~~ 95 (103)
T 2edf_A 82 VEA----SKSTASLHVEE 95 (103)
T ss_dssp CSS----CEEEEEEEECC
T ss_pred Ecc----CCcEEEEEEeC
Confidence 988 35666677664
No 478
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.48 E-value=8.6e-13 Score=80.86 Aligned_cols=87 Identities=23% Similarity=0.396 Sum_probs=66.5
Q ss_pred CCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEE
Q psy7036 112 APTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTA 191 (254)
Q Consensus 112 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~ 191 (254)
.+.+...+....+..|+.+.|.|.+ +.+.+.+.|+|++..+.......+..... ...|.|.+++.+|+|.|+|.+
T Consensus 8 ~~~~~~~~~~~~v~~G~~v~l~C~~-~~p~~~v~W~k~~~~l~~~~~~~~~~~~~----~~~L~I~~v~~~D~G~Y~C~a 82 (95)
T 2k1m_A 8 VSAFSKKPRSVEVAAGSPAVFEAET-ERAGVKVRWQRGGSDISASNKYGLATEGT----RHTLTVREVGPADQGSYAVIA 82 (95)
T ss_dssp CCCCSBCCCCEEEETTSCEEEEEEC-SSSSCCCEEECSSSEECSSTTCEEEEETT----EEEEEESSCCTTCCSEEEEEE
T ss_pred CCeeEeCCCcEEEeCCCcEEEEEEe-CCCCCeEEEEECCEECCCCCcEEEEEcCC----EEEEEEcCCCcccCEEEEEEE
Confidence 3455556667788999999999999 78888999999999887665544433222 137999999999999999999
Q ss_pred EcCCCcceEEEEEEEe
Q psy7036 192 KNELGESNATISLNFD 207 (254)
Q Consensus 192 ~~~~~~~~~~~~~~v~ 207 (254)
|....+..|.|.
T Consensus 83 ----g~~~~~~~l~V~ 94 (95)
T 2k1m_A 83 ----GSSKVKFDLKVI 94 (95)
T ss_dssp ----TTEEEEEEEEEE
T ss_pred ----CCceEEEEEEEe
Confidence 555566666653
No 479
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.47 E-value=6.7e-14 Score=99.77 Aligned_cols=122 Identities=20% Similarity=0.291 Sum_probs=80.0
Q ss_pred eeeecCCCeEEEEEEEee-CCCC----eEEEEECCEecccC-----C------cceEEEcCC---CCceeeEEEEccCCC
Q psy7036 121 IRQEDDGKRLLFECRIQA-DPAP----TVIWSHSGVQVKED-----K------RHKFSIDKD---GHSYFASLEIIDVTI 181 (254)
Q Consensus 121 ~~~~~~g~~~~l~C~~~~-~~~~----~~~W~~~~~~~~~~-----~------~~~~~~~~~---~~~~~~~l~i~~~~~ 181 (254)
.+.+..|+.+.|.|.+.+ .+.+ .+.|+|++...... . ..+.....+ .......|.|.+++.
T Consensus 8 ~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~ 87 (221)
T 3eow_R 8 QVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGLRV 87 (221)
T ss_dssp CCCCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCSSC
T ss_pred cEEEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccCCh
Confidence 445678999999999854 3433 39999986422110 0 111111110 000123899999999
Q ss_pred CCceeEEEEEEcCC-CcceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcE-EEEEEEe-ccCCCceeC
Q psy7036 182 EDAGKYKVTAKNEL-GESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDI-VIECRLV-GEPEPTISW 254 (254)
Q Consensus 182 ~d~G~y~C~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~-~l~C~~~-~~p~p~~~W 254 (254)
+|+|.|+|.+.+.. +.....+.|.|.. +|.+...+.... .+|+ .+ .|.|.+. +.|.|.++|
T Consensus 88 ~D~G~Y~C~~~~~~~~~~~~~~~L~V~~----------~P~~~~~~~~~~-~~g~-~~~~l~C~~~~g~P~p~v~W 151 (221)
T 3eow_R 88 EDEGSYTCLFVTFPQGSRSVDIWLRVLA----------KPQNTAEVQKVQ-LTGE-PVPMARCVSTGGRPPAQITW 151 (221)
T ss_dssp CCCSCBEEEEEESSSCSCEEECCCCCCC----------CCEEEEEEECCC-CCSS-SCCEEEEEEESCSSCCCEEE
T ss_pred HHCeEEEEEEEeCCCCceEEEEEEEEEE----------CCCceeecCCcc-cCCc-eEEEEEEECCCccCCCeeEE
Confidence 99999999999876 6666666666653 455544333323 5677 77 5999997 889999999
No 480
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.47 E-value=5.7e-13 Score=94.52 Aligned_cols=94 Identities=22% Similarity=0.365 Sum_probs=72.9
Q ss_pred CCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEE
Q psy7036 112 APTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTA 191 (254)
Q Consensus 112 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~ 191 (254)
+|.+ ..+....+..|+.+.|.|.+.+.|.+.+.|+|++..+......++....... .+.|.|.++..+|.|.|+|.|
T Consensus 19 ~P~~-~~p~~~~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~--~~~L~i~~~~~~d~G~Y~C~a 95 (215)
T 3mtr_A 19 APKL-QGPVAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPS--ASYLEVTPDSENDFGNYNCTA 95 (215)
T ss_dssp EEEE-ECCSEEEECTTCCEEEEEEEEEESCCEEEEEETTEESSCSSSCSEEEEEETT--EEEEEECCCSGGGCEEEEEEE
T ss_pred CCcc-cCCceEEEECCCCEEEEEEEeecCCCEEEEEECCeECCCCCCccEEEecCCC--eeEEEEecCChhhCeEEEEEE
Confidence 4444 3445577889999999999999999999999999988765432332221111 248999999999999999999
Q ss_pred EcCCCcceEEEEEEEec
Q psy7036 192 KNELGESNATISLNFDS 208 (254)
Q Consensus 192 ~~~~~~~~~~~~~~v~~ 208 (254)
.|..|.....+.+.+..
T Consensus 96 ~n~~g~~~~~~~l~v~~ 112 (215)
T 3mtr_A 96 VNRIGQESLEFILVQAD 112 (215)
T ss_dssp ECSSCEEEEEEEEEECC
T ss_pred EECCCceEEEEEEEECC
Confidence 99999888888887764
No 481
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.47 E-value=1.3e-13 Score=88.12 Aligned_cols=97 Identities=26% Similarity=0.444 Sum_probs=68.3
Q ss_pred CCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCc---ceEEEcCCCCceeeEEEEccCCCCCceeE
Q psy7036 111 LAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKR---HKFSIDKDGHSYFASLEIIDVTIEDAGKY 187 (254)
Q Consensus 111 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~i~~~~~~d~G~y 187 (254)
.+|.+...+....+..|+.+.|.|.+.+.|.|.+.|++++..+..... .......++......+.+.+++.+|.|.|
T Consensus 8 ~pP~i~~~p~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~D~G~Y 87 (117)
T 2v9t_A 8 FPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVY 87 (117)
T ss_dssp EEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCSSCSEEECTTSCEEESSCCCBTTBCSSCEEE
T ss_pred CCCeeEcCCCCEEEcCCCcEEEEEECCccCCCeEEEEECCEeccccCCCCcceeEEecCCcEEEEEEEeCCCCcCcCEEE
Confidence 455555556677788999999999999999999999999988764421 12223334432222233336678999999
Q ss_pred EEEEEcCCCcce-EEEEEEEe
Q psy7036 188 KVTAKNELGESN-ATISLNFD 207 (254)
Q Consensus 188 ~C~~~~~~~~~~-~~~~~~v~ 207 (254)
+|.|.|..|... ..+.+.+.
T Consensus 88 ~C~a~N~~G~~~s~~~~l~~~ 108 (117)
T 2v9t_A 88 VCVARNYLGEAVSHDASLEVA 108 (117)
T ss_dssp EEEEEETTEEEECCCEEEEEC
T ss_pred EEEEEeCccceEeeeEEEEhh
Confidence 999999999763 45666654
No 482
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.47 E-value=2e-13 Score=98.48 Aligned_cols=126 Identities=14% Similarity=0.125 Sum_probs=83.8
Q ss_pred CCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEE
Q psy7036 112 APTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTA 191 (254)
Q Consensus 112 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~ 191 (254)
+|.+...+.. .+.+|+.++|.|.+.+ +...+.|+|++..+....... ........|.|.+++.+|+|.|+|.+
T Consensus 7 kP~i~~~P~~-~v~~G~~VtL~C~~~~-~~~~~~w~k~g~~~~~~~~~~-----~~~~~~~~L~I~~v~~~DsG~Y~C~~ 79 (242)
T 1p6f_A 7 KPFIWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPKP-----PERINKVKFYIPDMNSRMAGQYSCIY 79 (242)
T ss_dssp CCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECCSS-----CTTCCEEEEEECSCCGGGCEEEEEEE
T ss_pred CCEEEeeCCC-ccCCCCcEEEEEeeCC-CCcEEEEEECCCccccccccc-----cCCcceeEEEecCCCcccCeEEEEEE
Confidence 3444444444 6788999999999864 456899999997754211000 00111247999999999999999999
Q ss_pred EcCCCc--ceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEeccCCCceeC
Q psy7036 192 KNELGE--SNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEPEPTISW 254 (254)
Q Consensus 192 ~~~~~~--~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p~p~~~W 254 (254)
.+..+. .+..+.|.|... ...|.+...+. ..+.+|+ .++|.|.+.+.+ +.+.|
T Consensus 80 ~~~~~~s~~S~~~~L~V~~~-------~~~P~i~~~p~-~~v~~G~-~vtL~C~~~~~~-~~~~w 134 (242)
T 1p6f_A 80 RVGELWSEPSNLLDLVVTEM-------YDTPTLSVHPG-PEVISGE-KVTFYCRLDTAT-SMFLL 134 (242)
T ss_dssp EETTEECCCCCCEEEEEECC-------SCCCEEEEESC-SEEETTC-EEEEEEECTTSC-SEEEE
T ss_pred ecCCccccCCcceEEEeecc-------cCCCceEccCC-CccCCCC-cEEEEEecCCCC-CEEEE
Confidence 886442 244566666531 12566665553 3577899 999999987643 46666
No 483
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.46 E-value=1.1e-12 Score=81.19 Aligned_cols=89 Identities=26% Similarity=0.373 Sum_probs=67.4
Q ss_pred CCCccccCCCe-eeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEE
Q psy7036 111 LAPTFLKKPSI-RQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKV 189 (254)
Q Consensus 111 ~~~~~~~~~~~-~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C 189 (254)
.+|.+...+.. ..+..|+.+.|.|.+. .|.+.+.|+|++..+.......+..... . ..|.|.++..+|+|.|+|
T Consensus 6 ~~p~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~W~k~g~~i~~~~~~~~~~~~~--~--~~L~I~~~~~~D~G~Y~C 80 (100)
T 2yuv_A 6 SGAAFAKILDPAYQVDKGGRVRFVVELA-DPKLEVKWYKNGQEIRPSTKYIFEHKGC--Q--RILFINNCQMTDDSEYYV 80 (100)
T ss_dssp SSCCEEECCCSCEEECTTEEEEEEEEES-CTTSCEEEEESSCBCCCBTTEEEEEETT--E--EEEEEEEECTTTCCEEEE
T ss_pred CCCeEEecCCCccEEcCCCcEEEEEEec-CCCceEEEEECCEECCCCCCEEEEecCC--E--EEEEEcCCCcCcCEEEEE
Confidence 35555545554 5778999999999997 7888999999999887655544433222 1 279999999999999999
Q ss_pred EEEcCCCcceEEEEEEEec
Q psy7036 190 TAKNELGESNATISLNFDS 208 (254)
Q Consensus 190 ~~~~~~~~~~~~~~~~v~~ 208 (254)
.| +....+..|.|..
T Consensus 81 ~a----g~~~~~~~l~V~~ 95 (100)
T 2yuv_A 81 TA----GDEKCSTELFVRS 95 (100)
T ss_dssp EE----TTEEEEEEEEECC
T ss_pred EE----CCceEEEEEEEec
Confidence 99 6667777777764
No 484
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.46 E-value=4.1e-13 Score=97.86 Aligned_cols=132 Identities=18% Similarity=0.255 Sum_probs=80.7
Q ss_pred CCeeeecCCCeEEEEEEEeeC--CCCeEEEEECC--Eec---cc-C------CcceEEEcCCCCceeeEEEEccCCCCCc
Q psy7036 119 PSIRQEDDGKRLLFECRIQAD--PAPTVIWSHSG--VQV---KE-D------KRHKFSIDKDGHSYFASLEIIDVTIEDA 184 (254)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~--~~~~~~W~~~~--~~~---~~-~------~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 184 (254)
+....+.+|+.++|.|.+.+. +.+.+.|+|+. ... .. . ...++....++ ....|.|.+++.+|+
T Consensus 9 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~L~I~~v~~~Ds 86 (256)
T 3ux9_B 9 PPSVSGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSG--TSASLAITGLQSEDE 86 (256)
T ss_dssp CSEEEECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEET--TEEEEEECSCCGGGC
T ss_pred CCcEEEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccC--CEEEEEECCCChhhC
Confidence 345678899999999999876 67889999852 111 00 0 01112221111 123799999999999
Q ss_pred eeEEEEEEcCCCc---ceEEEEEEEecCCCCCC-----------CCCCCCeeecCCccccccCCCCcEEEEEEEeccC--
Q psy7036 185 GKYKVTAKNELGE---SNATISLNFDSDDAPVP-----------GEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEP-- 248 (254)
Q Consensus 185 G~y~C~~~~~~~~---~~~~~~~~v~~~~~~~~-----------~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p-- 248 (254)
|.|.|.+.+..+. ......|.|.......+ .....+.+...+ ...+.+|+ .++|.|.+.+.|
T Consensus 87 G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~G~-~v~L~C~~~~~~~~ 164 (256)
T 3ux9_B 87 ADYYCQVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVESG-GGLVQPGG-SLRLSCAASGFTFS 164 (256)
T ss_dssp EEEEEEEEETTTTEEEECCCEEEEEC----------------------CCEEEEEC-CEEECTTC-CEEEEEEEESSCGG
T ss_pred EEEEEEEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEcCC-CeEEcCCC-eEEEEEEEeCCccc
Confidence 9999999986542 22334566654221100 000122344333 33578899 999999999876
Q ss_pred CCceeC
Q psy7036 249 EPTISW 254 (254)
Q Consensus 249 ~p~~~W 254 (254)
.+.+.|
T Consensus 165 ~~~v~W 170 (256)
T 3ux9_B 165 SYAMSW 170 (256)
T ss_dssp GSEEEE
T ss_pred ccEEEE
Confidence 577888
No 485
>3c6l_A TCR 2W20 alpha chain; TCR-PMHC complex; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.19 E-value=5.1e-15 Score=101.77 Aligned_cols=134 Identities=16% Similarity=0.147 Sum_probs=81.5
Q ss_pred eEeCCCceeecCCCeEEEEEEEeeCCCCceEEEeCCE--E---e-e--------eCCcceEEEeecCCcceEEEEEEecc
Q psy7036 11 FTQKPQLRQEDEGNRLIFECQLLCNPKPDIVWFRGET--Q---L-S--------EDTRTVMKTTPIGTNKYLVALELDDV 76 (254)
Q Consensus 11 ~~~~~~~~~v~~g~~v~l~C~~~~~~~~~v~W~~~~~--~---~-~--------~~~~~~~~~~~~~~~~~~~~l~i~~~ 76 (254)
+++.|..+.+.+|++++|.|.+.+.+...+.|||... . + . ...++.+... .......|.|.++
T Consensus 3 v~Q~p~~v~v~~G~svtL~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~R~s~~~~---~~~~~~sL~I~~v 79 (185)
T 3c6l_A 3 VRQSPQSLTVWEGETAILNCSYEDSTFDYFPWYHQFPGESPALLIAIRPVSNKKEDGRFTIFFN---KREKKFSLHIADS 79 (185)
Confidence 4566778889999999999999765556899998541 1 1 0 0112211111 1123447999999
Q ss_pred CCCCCeEEEEEEEcCCCceEEEEEEEEeccccCCCCCccccCCCeeeecCCCeEEEEEEEee-CCCCeEEEEECCEec
Q psy7036 77 IETDAGLYKVKAKNKMGEVAASINLNFSREQIDGLAPTFLKKPSIRQEDDGKRLLFECRIQA-DPAPTVIWSHSGVQV 153 (254)
Q Consensus 77 ~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~~~~W~~~~~~~ 153 (254)
+.+|+|.|.|.+.+..........|.|...... ..|.+..... ..+.++|.|.+.+ +|.+.+.|+.+....
T Consensus 80 ~~~DsG~Y~C~~~~~~~~fg~gT~L~V~~~~~~-~~P~V~~~~~-----~~~~vtL~C~~~gf~P~p~v~~~~~~~~~ 151 (185)
T 3c6l_A 80 QPGDSATYFCAASDNRIFFGDGTQLVVKPNIQN-PEPAVYQLKD-----PRSQDSTLCLFTDFDSQINVPKTMESGTF 151 (185)
Confidence 999999999998752111112345555431110 1122221111 1226899999988 678899998766544
No 486
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.46 E-value=6.1e-13 Score=96.45 Aligned_cols=132 Identities=16% Similarity=0.224 Sum_probs=80.4
Q ss_pred CCeeeecCCCeEEEEEEEeeCC-----CCeEEEEECC--Ee---cccC-------CcceEEEcCCCCceeeEEEEccCCC
Q psy7036 119 PSIRQEDDGKRLLFECRIQADP-----APTVIWSHSG--VQ---VKED-------KRHKFSIDKDGHSYFASLEIIDVTI 181 (254)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~-----~~~~~W~~~~--~~---~~~~-------~~~~~~~~~~~~~~~~~l~i~~~~~ 181 (254)
+..+.+.+|+.++|.|.+.+.+ .+.+.|+|+. .. +... ...++....++ ....|.|.+++.
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~L~I~~v~~ 85 (247)
T 1svz_A 8 PLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSG--TDFTLKISRVEA 85 (247)
T ss_dssp CSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEET--TEEEEEESSCCG
T ss_pred CCeEEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCC--CEEEEEECCCCH
Confidence 4566788999999999998887 6789999853 11 1000 01112211111 123799999999
Q ss_pred CCceeEEEEEEcCCCc-ceEEEEEEEecCCCC---CCCCCCC-CeeecCCccccccCCCCcEEEEEEEeccC--CCceeC
Q psy7036 182 EDAGKYKVTAKNELGE-SNATISLNFDSDDAP---VPGEGTK-PVFTERPVTKQSDDDLNDIVIECRLVGEP--EPTISW 254 (254)
Q Consensus 182 ~d~G~y~C~~~~~~~~-~~~~~~~~v~~~~~~---~~~~~~~-p~~~~~~~~~~~~~g~~~~~l~C~~~~~p--~p~~~W 254 (254)
+|+|.|.|.+.|..+. ......|.|...... ......+ +.+...+. ..+.+|+ .++|.|.+.+.| .+.+.|
T Consensus 86 ~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~G~-~v~L~C~~~~~~~~~~~v~W 163 (247)
T 1svz_A 86 EDLGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQSGP-ELKKPGE-TVKISCKATNYAFTDYSMHW 163 (247)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEECCC-EEECTTC-CEEEEEEEESSCGGGSCEEE
T ss_pred HHCEEEEEEEccCCccEECCCEEEEEECCccccccccccccCceEEeCCCc-eeecCCC-cEEEEEEEcCcccCCcEEEE
Confidence 9999999999987553 223345666542110 0000012 23333333 3588899 999999999875 467888
No 487
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.46 E-value=4.1e-13 Score=97.77 Aligned_cols=127 Identities=17% Similarity=0.243 Sum_probs=73.0
Q ss_pred eeeecCCCeEEEEEEEeeCC--CCeEEEEECC--Eecc----c-----------CCcceEEEcCCCCceeeEEEEccCCC
Q psy7036 121 IRQEDDGKRLLFECRIQADP--APTVIWSHSG--VQVK----E-----------DKRHKFSIDKDGHSYFASLEIIDVTI 181 (254)
Q Consensus 121 ~~~~~~g~~~~l~C~~~~~~--~~~~~W~~~~--~~~~----~-----------~~~~~~~~~~~~~~~~~~l~i~~~~~ 181 (254)
...+.+|+.++|.|.+.+.+ .+.+.|+|.. ..+. . ....++....+.......|.|.+++.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 88 (257)
T 3bn9_D 9 GGLVKPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMSSLRA 88 (257)
T ss_dssp CEEECTTCEEEEEEEEESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEESCCG
T ss_pred CEEEcCCCcEEEEEEeccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEECCCCh
Confidence 35678899999999998765 5789999853 1110 0 00112222211111124799999999
Q ss_pred CCceeEEEEEEcCCCc-------------ceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEecc-
Q psy7036 182 EDAGKYKVTAKNELGE-------------SNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGE- 247 (254)
Q Consensus 182 ~d~G~y~C~~~~~~~~-------------~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~- 247 (254)
+|+|.|.|.+.+..+. ......|.|.... ..+|.+...+....+..|+ .+.|.|.+.|.
T Consensus 89 ~DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~~------~~~P~v~~~~p~~~~~~g~-~v~L~C~~~g~~ 161 (257)
T 3bn9_D 89 EDTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSAS------TKGPSVFPLAPSSKSTSGG-TAALGCLVKDYF 161 (257)
T ss_dssp GGCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSSC------CBCCEECCCCC------------CCCEEEEEB
T ss_pred hhCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCCC------CcCCcEEEecCcccccCCC-cEEEEEEEeeEE
Confidence 9999999999987641 1123456665311 1245554332222356788 99999999986
Q ss_pred CCC-ceeC
Q psy7036 248 PEP-TISW 254 (254)
Q Consensus 248 p~p-~~~W 254 (254)
|.| .++|
T Consensus 162 P~pi~v~W 169 (257)
T 3bn9_D 162 PEPVTVSW 169 (257)
T ss_dssp SSCCEEEE
T ss_pred CCCcEEEE
Confidence 877 7988
No 488
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.46 E-value=1.2e-12 Score=94.63 Aligned_cols=134 Identities=17% Similarity=0.195 Sum_probs=80.8
Q ss_pred CCCeeeecCCCeEEEEEEEeeC--CCCeEEEEECC--Ee---cc-cC-----------CcceEEEcCCCCceeeEEEEcc
Q psy7036 118 KPSIRQEDDGKRLLFECRIQAD--PAPTVIWSHSG--VQ---VK-ED-----------KRHKFSIDKDGHSYFASLEIID 178 (254)
Q Consensus 118 ~~~~~~~~~g~~~~l~C~~~~~--~~~~~~W~~~~--~~---~~-~~-----------~~~~~~~~~~~~~~~~~l~i~~ 178 (254)
.+..+.+.+|+.++|.|.+.+. +.+.+.|+|.. .. +. .. ...++....+.......|.|.+
T Consensus 7 ~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 86 (242)
T 1hxm_B 7 PQISSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTLTIHN 86 (242)
T ss_dssp CCSEEEEETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEEEEECS
T ss_pred CCceEEecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEEEEECC
Confidence 4456778899999999999875 56789999853 11 10 00 1122222211111234799999
Q ss_pred CCCCCceeEEEEEEcCCC-c------ceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEecc-CC-
Q psy7036 179 VTIEDAGKYKVTAKNELG-E------SNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGE-PE- 249 (254)
Q Consensus 179 ~~~~d~G~y~C~~~~~~~-~------~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~-p~- 249 (254)
++.+|+|.|.|.+.+... . ......|.|.......... ..+.+. .+....+..|+ .+.|.|.+.|. |.
T Consensus 87 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~-p~~~v~-~p~~~~~~~g~-~v~L~C~~~g~~P~~ 163 (242)
T 1hxm_B 87 VEKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDADVS-PKPTIF-LPSIAETKLQK-AGTYLCLLEKFFPDV 163 (242)
T ss_dssp CCGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSCCS-CBCCCC-CCCGGGGGSSS-CEEEEEEEEEESSCC
T ss_pred CCcccCEEEEEeeecCCccccccceeEcCcEEEEEcccccCCCcC-CCceEE-CCChhhcccCC-CceEEEEEeeEECCC
Confidence 999999999999998631 1 1123456665421100000 011222 24444556788 99999999987 65
Q ss_pred CceeC
Q psy7036 250 PTISW 254 (254)
Q Consensus 250 p~~~W 254 (254)
+.++|
T Consensus 164 ~~v~W 168 (242)
T 1hxm_B 164 IKIHW 168 (242)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 67888
No 489
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.45 E-value=9.9e-13 Score=96.53 Aligned_cols=133 Identities=15% Similarity=0.209 Sum_probs=82.3
Q ss_pred cccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEEC--CEec------------ccC-Cc-ceEEEcCCCCceeeEEEEcc
Q psy7036 115 FLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHS--GVQV------------KED-KR-HKFSIDKDGHSYFASLEIID 178 (254)
Q Consensus 115 ~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~--~~~~------------~~~-~~-~~~~~~~~~~~~~~~l~i~~ 178 (254)
+...+..+.+..|+.++|.|.+. .+.+.+.|+|. +... ... .. .++....+. .....|.|.+
T Consensus 29 v~~~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~-~~~~sL~I~~ 106 (268)
T 3pl6_D 29 VSQTPSNKVTEKGKYVELRCDPI-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPE-GSVSTLKIQR 106 (268)
T ss_dssp CBCCCSEEEEETTCCEEEEEBCB-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTT-SSSEEEEECS
T ss_pred eEeCCCEEEecCCCCEEEEEEeC-CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecC-CCEEEEEECC
Confidence 34455667788999999999975 56778999982 2111 000 00 122222211 1124799999
Q ss_pred CCCCCceeEEEEEEcC--CCcceEEEEEEEecCCCCCCCCCCCCeee-cCCccccccCCCCcEEEEEEEeccCCC--cee
Q psy7036 179 VTIEDAGKYKVTAKNE--LGESNATISLNFDSDDAPVPGEGTKPVFT-ERPVTKQSDDDLNDIVIECRLVGEPEP--TIS 253 (254)
Q Consensus 179 ~~~~d~G~y~C~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~p~~~-~~~~~~~~~~g~~~~~l~C~~~~~p~p--~~~ 253 (254)
++.+|+|.|+|.+.+. .........+.|..... ...+|.+. ..+....+..|+ .+.|.|.+.|.|++ .++
T Consensus 107 v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~----~~~~P~v~~~~~~~~~~~~g~-~v~L~C~~~g~~p~~~~v~ 181 (268)
T 3pl6_D 107 TERGDSAVYLCATSALGDTQYFGPGTRLTVLEDLK----NVFPPEVAVFEPSEAEISHTQ-KATLVCLATGFYPDHVELS 181 (268)
T ss_dssp CCGGGCEEEEEEEESSSSSCEECCCEEEEEESCGG----GCBCCEEEEECCCHHHHHHHS-EEEEEEEEEEEBSSCEEEE
T ss_pred CCcccCEEEEEEEecCCCceeeCCcEEEEEecCcc----cccCCceEEeCCCcccccCCC-ceEEEEEECcccCCCeEEE
Confidence 9999999999999984 22233344455553110 11244433 334444556688 99999999986554 788
Q ss_pred C
Q psy7036 254 W 254 (254)
Q Consensus 254 W 254 (254)
|
T Consensus 182 W 182 (268)
T 3pl6_D 182 W 182 (268)
T ss_dssp E
T ss_pred E
Confidence 8
No 490
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.45 E-value=1.3e-12 Score=94.63 Aligned_cols=132 Identities=19% Similarity=0.283 Sum_probs=81.3
Q ss_pred ccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEEC--------------CEecccCC-c-ceEEEcCCCCceeeEEEEccC
Q psy7036 116 LKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHS--------------GVQVKEDK-R-HKFSIDKDGHSYFASLEIIDV 179 (254)
Q Consensus 116 ~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~--------------~~~~~~~~-~-~~~~~~~~~~~~~~~l~i~~~ 179 (254)
...+..+.+.+|+.+.|.| ..+.+.+.+.|+|. +....... . .++....+. .....|.|.++
T Consensus 6 ~~~p~~v~v~~G~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~sL~I~~v 83 (245)
T 4ei6_B 6 LQIPSHQIIDMGQMVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPD-GSYFTLKIQPT 83 (245)
T ss_dssp EEECSEEEEETTCCEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCT-TSCEEEEECSC
T ss_pred EeCCceEEecCCCCEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEecc-CceEEEEECCC
Confidence 3344567788999999999 56778889999982 21111110 0 222222211 11248999999
Q ss_pred CCCCceeEEEEEEcCC----CcceEEEEEEEecCCCCCCCCCCCCeee-cCCccccccCCCCcEEEEEEEecc-CCC-ce
Q psy7036 180 TIEDAGKYKVTAKNEL----GESNATISLNFDSDDAPVPGEGTKPVFT-ERPVTKQSDDDLNDIVIECRLVGE-PEP-TI 252 (254)
Q Consensus 180 ~~~d~G~y~C~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~p~~~-~~~~~~~~~~g~~~~~l~C~~~~~-p~p-~~ 252 (254)
+.+|+|.|.|.+.+.. ........+.|..... ...+|.+. ..+....+.+|+ .+.|.|.+.|. |.+ .+
T Consensus 84 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~----~~~~p~~~~~~~~~~~~~~g~-~v~l~C~~~g~~p~~~~v 158 (245)
T 4ei6_B 84 ALEDSAVYFCASSFWGAYAEQFFGPGTRLTVLEDLK----NVFPPEVAVFEPSEAEISHTQ-KATLVCLATGFYPDHVEL 158 (245)
T ss_dssp CGGGCEEEEEEEECSSTTCCCEECCCEEEEEESCGG----GCBCCEEEEECCCHHHHHHHS-EEEEEEEEEEEBSSCEEE
T ss_pred CHhHCEEEEEEEccCCCcceEEEcCCcEEEEecccC----CCCCceEEEeCCCcccccCCC-ceEEEEEEeeEeCCCeEE
Confidence 9999999999999632 2223334555553110 11244433 344444566688 99999999985 545 78
Q ss_pred eC
Q psy7036 253 SW 254 (254)
Q Consensus 253 ~W 254 (254)
+|
T Consensus 159 ~W 160 (245)
T 4ei6_B 159 SW 160 (245)
T ss_dssp EE
T ss_pred EE
Confidence 88
No 491
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.45 E-value=1.1e-12 Score=80.89 Aligned_cols=80 Identities=25% Similarity=0.405 Sum_probs=62.6
Q ss_pred CCeeeecCCCeEEEEEEEe-eCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcCCCc
Q psy7036 119 PSIRQEDDGKRLLFECRIQ-ADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNELGE 197 (254)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~-~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~ 197 (254)
+....+..|+.+.|.|.+. +.|.+.+.|+|++....... .. ..++ .|.|.+++.+|+|.|+|.+.|..|.
T Consensus 17 ~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~~~~~~~~~--~~--~~~~-----~L~i~~v~~~D~G~Y~C~a~n~~g~ 87 (98)
T 1gl4_B 17 QRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPSR--AM--DFNG-----ILTIRNVQPSDAGTYVCTGSNMFAM 87 (98)
T ss_dssp CCEEEECTTCCEEEEEEEEESSSCCEEEEEEGGGBCCCTT--EE--EETT-----EEEECSCCGGGCEEEEEEEECSSCE
T ss_pred CCCeEEecCCCEEEEEeCCCCCCCcEEEEEeCCCCCCCce--ee--cCCC-----EEEEeCCChhhCEEEEEEecCCCCc
Confidence 4556788999999999998 58889999999754332221 11 1122 7999999999999999999999998
Q ss_pred ceEEEEEEEe
Q psy7036 198 SNATISLNFD 207 (254)
Q Consensus 198 ~~~~~~~~v~ 207 (254)
....+.|.|.
T Consensus 88 ~~~~~~l~V~ 97 (98)
T 1gl4_B 88 DQGTATLHVQ 97 (98)
T ss_dssp EEEEEEEEEC
T ss_pred cccEEEEEEe
Confidence 8888777764
No 492
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.45 E-value=4.3e-14 Score=101.61 Aligned_cols=126 Identities=15% Similarity=0.234 Sum_probs=67.7
Q ss_pred CCeeeecCCCeEEEEEEEeeCCCCeEEEEECCE--ec---c-------cCCcceEEEcCCCCceeeEEEEccCCCCCcee
Q psy7036 119 PSIRQEDDGKRLLFECRIQADPAPTVIWSHSGV--QV---K-------EDKRHKFSIDKDGHSYFASLEIIDVTIEDAGK 186 (254)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~--~~---~-------~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 186 (254)
+....+.+|+.+.|.|.+.+.+.+.+.|+|+.. .. . .....++.... ......|.|.+++.+|+|.
T Consensus 30 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~D~G~ 107 (233)
T 3bqu_C 30 PASLSMSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSG--YGTDFVFTIENMLSEDVAD 107 (233)
T ss_dssp CSBC-------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCE--EEEEEEEC-----CCCCSE
T ss_pred CCeEEEecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeec--cCCEEEEEECCCCHHHCEE
Confidence 445567789999999999888777899998532 11 0 00000111100 1122379999999999999
Q ss_pred EEEEEEcCCCcc-eEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEecc-CCC-ceeC
Q psy7036 187 YKVTAKNELGES-NATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGE-PEP-TISW 254 (254)
Q Consensus 187 y~C~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~-p~p-~~~W 254 (254)
|.|.+.|..+.. .....+.|... ..+|.+...+....+.+|+ .++|.|.+.|. |.+ .++|
T Consensus 108 Y~C~~~~~~~~~~~~~~~l~V~~~-------~~~p~v~~~~~~~~~~~g~-~v~L~C~~~g~~p~~~~v~W 170 (233)
T 3bqu_C 108 YYCLQSDNLPYTFGGGTNLEIKRA-------DAAPTVSIFPPSSEQLTSG-GASVVCFLNNFYPKDINVKW 170 (233)
T ss_dssp EEEEECSSSSCCBCCCCBC---CC-------CBCCEEEEECCCHHHHHTT-EEEEEEEEEEEBSSCEEEEE
T ss_pred EEEEEecCCceeecCCEEEEEeCC-------CCCCEEEEeCCCHHhhcCC-ceEEEEEEccccCCceEEEE
Confidence 999999876532 22223444321 1256665544333445788 99999999986 444 6888
No 493
>4f9p_D 103.2 anti-BTN3A1 antibody fragment; B7 superfamily, butyrophilin, CD277, immune system; 3.52A {Mus musculus}
Probab=99.45 E-value=2.7e-11 Score=84.57 Aligned_cols=174 Identities=16% Similarity=0.195 Sum_probs=99.7
Q ss_pred eeecCCCeEEEEEEEeeCC--CCceEEEeC--CEEe------e---------eCCcceEEEeecCCcceEEEEEEeccCC
Q psy7036 18 RQEDEGNRLIFECQLLCNP--KPDIVWFRG--ETQL------S---------EDTRTVMKTTPIGTNKYLVALELDDVIE 78 (254)
Q Consensus 18 ~~v~~g~~v~l~C~~~~~~--~~~v~W~~~--~~~~------~---------~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 78 (254)
..+.+|++++|.|.+.|.. ...+.|+|. |+-+ . ..-+.++....+.. .-...|.+.+++.
T Consensus 10 ~lvkPG~Sl~lSC~~SG~tf~~y~~~WvRQaPGkgLEWvg~I~~~~g~t~Y~~s~kgR~TiSrD~s-~nt~yLqm~sL~~ 88 (254)
T 4f9p_D 10 EVVRPGTSVKVSCKASGYAFTSYLIHWIKQRPGQGLEWIGVINPRSGDSHYNEKFKDRTTLTADQS-SSTAYMQLSSLTS 88 (254)
T ss_dssp EEECTTCCEEEEEEEESSCGGGCCEEEEEEETTTEEEEEEEEETTTTEEECCTTTTTTEEEEEETT-TTEEEEEECSCCG
T ss_pred ceECCCCCeEEEEEEeCCChhhCcEEEEEeCCCCCeEEEEEEcCCCCCEEECHHhCCCEEEeeccC-CCcCeeEEccCCC
Confidence 4689999999999998754 345788872 2211 1 11112222222222 2233699999999
Q ss_pred CCCeEEEEEEEcCCCceEEEEEEEEeccccC--C-------------CCCccccCCCeeeecCCCeEEEEEEEeeCCCCe
Q psy7036 79 TDAGLYKVKAKNKMGEVAASINLNFSREQID--G-------------LAPTFLKKPSIRQEDDGKRLLFECRIQADPAPT 143 (254)
Q Consensus 79 ~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~--~-------------~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~ 143 (254)
+|.+.|.|.-.....-.-....|+|...... . ....+...+..+.+.+|+.++|.|.+...-...
T Consensus 89 eDTAvYYCAr~~~~d~WGqGT~VTVSSast~~ps~~~l~~~~sgGSgsdivltQsP~slsvs~G~~vtlsC~~S~~~~~~ 168 (254)
T 4f9p_D 89 DDSAVYFCARSDYGAYWGQGTLVTVSAAGGGGSGGGGSGGGGSGGGGSDIVLTQSPVTLSVTPGDSVSLSCRASQSISNN 168 (254)
T ss_dssp GGCEEEECEESSSCCEECCCEEEEECC-------------------CCSCCEEEECSEEEECTTCEEEEEEEESSCCTTC
T ss_pred CCCEEEEEEecCCCCCcCCCEEEEEeCCCCcCCCCCCCccccccccccccccccCCceeEEcCCCcEeeEEEccCcccCC
Confidence 9999999975432211112334555321000 0 000112334556788999999999986554445
Q ss_pred EEEEEC--CEe---c-------ccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEEEEcC
Q psy7036 144 VIWSHS--GVQ---V-------KEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVTAKNE 194 (254)
Q Consensus 144 ~~W~~~--~~~---~-------~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~ 194 (254)
+.||+. |+. + ...-..++.....+.. .+|+|.+++.+|.+.|.|...+.
T Consensus 169 l~WyqQ~PG~~p~lLiy~~s~~~sGvp~RFSgS~sgt~--ftLtIs~lq~eD~A~YYC~q~~~ 229 (254)
T 4f9p_D 169 LHWYRQKSHESPRLLIKYASQSIFGIPSRFSGSGSGTE--FTLSINSVETEDFGIYFCQQSNS 229 (254)
T ss_dssp CEEEEECTTSCCEEEEETTTEECTTSCTTCEEECCTTE--EEEEEESCCTTCCEEEEEEECSS
T ss_pred cEEEEECCCCCCEEEEEeeeecCCCCCCCEEeeeeCCE--EEEEECCCCHHHCEEEEEeecCC
Confidence 889863 221 1 0111123333333322 26999999999999999976543
No 494
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.45 E-value=5.4e-13 Score=91.09 Aligned_cols=109 Identities=17% Similarity=0.251 Sum_probs=76.5
Q ss_pred eeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCC----------cceEEEc-CCCCceeeEEEEccCCCCCceeEEEE
Q psy7036 122 RQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDK----------RHKFSID-KDGHSYFASLEIIDVTIEDAGKYKVT 190 (254)
Q Consensus 122 ~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~----------~~~~~~~-~~~~~~~~~l~i~~~~~~d~G~y~C~ 190 (254)
+.+..|+.++|.|.+. .|.+.+.|++++..+.... ..++... .++ +|.|.+++.+|+|.|.|.
T Consensus 5 v~~~~G~~VtL~c~~~-~~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~-----sL~I~~v~~~DsG~Y~C~ 78 (171)
T 1ccz_A 5 IYGVVYGNVTFHVPSN-VPLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSG-----SLTIYNLTSSDEDEYEME 78 (171)
T ss_dssp EEEETTCCEEECCCCS-SCCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTC-----CEEECSCCGGGCEEEEEE
T ss_pred EEEEcCCCEEEcCCCC-CCcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCC-----eEEECCCChhhCceEEEE
Confidence 4567899999999984 4778999999886542111 1122222 222 799999999999999999
Q ss_pred EEcCCCcceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEeccCCCceeC
Q psy7036 191 AKNELGESNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEPEPTISW 254 (254)
Q Consensus 191 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p~p~~~W 254 (254)
+.|..+ ...+.|.|... ...|.+..... ...|.|.+.+.|.|.++|
T Consensus 79 ~~n~~~--~~~~~L~V~~~-------~~~p~i~~~~~---------~~~L~C~~~~~p~p~i~W 124 (171)
T 1ccz_A 79 SPNITD--TMKFFLYVLEM-------VSKPMIYWECS---------NATLTCEVLEGTDVELKL 124 (171)
T ss_dssp CTTCCS--CEEEEEEEECC-------CCCCEEEEETT---------TTEEEEECSSCSSCEEEE
T ss_pred EeCCCC--cEEEEEEEECc-------CCCCEEEEecC---------CcEEEEEeCCCCCcEEEE
Confidence 998877 56667777642 12344432211 127999999999999998
No 495
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.45 E-value=1.1e-12 Score=92.98 Aligned_cols=126 Identities=17% Similarity=0.243 Sum_probs=77.3
Q ss_pred CeeeecCCCeEEEEEEEeeC--CCCeEEEEECC--Ee---c---cc--------CCcceEEEcCCCCceeeEEEEccCCC
Q psy7036 120 SIRQEDDGKRLLFECRIQAD--PAPTVIWSHSG--VQ---V---KE--------DKRHKFSIDKDGHSYFASLEIIDVTI 181 (254)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~~--~~~~~~W~~~~--~~---~---~~--------~~~~~~~~~~~~~~~~~~l~i~~~~~ 181 (254)
..+.+.+|+.++|.|.+.+. +.+.+.|+|.. .. + .. ....++.....+ ....|.|.+++.
T Consensus 7 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~L~I~~v~~ 84 (215)
T 3nl4_H 7 GGRLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTS--TTVDLKITSPTT 84 (215)
T ss_dssp CCCEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECS--SEEEEEESSCCG
T ss_pred CCEEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeC--CEEEEEECCCCc
Confidence 34567889999999999764 35689999742 11 1 00 001112221111 124799999999
Q ss_pred CCceeEEEEEEcCCCc----ceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEeccCCC--ceeC
Q psy7036 182 EDAGKYKVTAKNELGE----SNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEPEP--TISW 254 (254)
Q Consensus 182 ~d~G~y~C~~~~~~~~----~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p~p--~~~W 254 (254)
+|+|.|.|.+.+..+. ......+.|... ...+|.+...+....+.+|+ .+.|.|.+.+.|++ .+.|
T Consensus 85 ~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~------~~~~P~i~~~~~~~~~~~g~-~v~l~C~~~~~~p~~~~v~W 156 (215)
T 3nl4_H 85 EDTATYFCVRKYGSEWGGDLWGPGTLVTVSSG------QPKAPSVFPLAPCCGDTPSS-TVTLGCLVKGYLPEPVTVTW 156 (215)
T ss_dssp GGCEEEEEEEECSSSSCEEEECCCEEEEECSS------CCBCCEEEEECCCTTCCC---CEEEEEEEEEEBSSCCEEEE
T ss_pred ccCEEEEEEEecCCCccceEEcCCEEEEEeCC------CcCCCEEEEecCCccccCCC-cEEEEEEEeeeeCCCeEEEE
Confidence 9999999999987552 233345566521 11255555333333566788 99999999987543 4667
No 496
>4gos_A V-SET domain-containing T-cell activation inhibit; immunoglobulin domain, glycoprotein, disulfide bond, immunit adaptive immunity; HET: NAG BMA MAN; 1.59A {Homo sapiens}
Probab=99.45 E-value=2.6e-13 Score=87.49 Aligned_cols=96 Identities=21% Similarity=0.158 Sum_probs=66.3
Q ss_pred CeeEeCCCceeecCCCeEEEEEEEeeCCC---CceEEEeCCEE-----------eee----CCcceEEEeecCCcceEEE
Q psy7036 9 PSFTQKPQLRQEDEGNRLIFECQLLCNPK---PDIVWFRGETQ-----------LSE----DTRTVMKTTPIGTNKYLVA 70 (254)
Q Consensus 9 p~~~~~~~~~~v~~g~~v~l~C~~~~~~~---~~v~W~~~~~~-----------~~~----~~~~~~~~~~~~~~~~~~~ 70 (254)
..++..+....+..|++|+|.|.+...+. ..|.|+|++.. ... ....+..........+..+
T Consensus 6 ~sVt~~~~~v~g~vG~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~R~~~~~~~~~~g~~s 85 (125)
T 4gos_A 6 HSITVTTVASAGNIGEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNAS 85 (125)
T ss_dssp CCSCEEEECEEEETTSCEEEEEEECCCSCGGGCEEEEEETTCSSBSEEEETTEECCTTBCGGGTTCEEECTTTGGGTBCC
T ss_pred eEEEccCceEEEeCCCCEEEEEEEcCCcccCcEEEEEEEeccCceEEEEEeecccccccCccccceEEEecCCccCCeEE
Confidence 34555666678889999999999864332 36899986531 100 0112222222222233458
Q ss_pred EEEeccCCCCCeEEEEEEEcCCCceEEEEEEEEe
Q psy7036 71 LELDDVIETDAGLYKVKAKNKMGEVAASINLNFS 104 (254)
Q Consensus 71 l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~ 104 (254)
|.|.+++.+|+|.|+|.+.+..+.....+.|+|-
T Consensus 86 L~I~~v~~~D~G~Y~C~v~~~~g~~~~~v~LkVG 119 (125)
T 4gos_A 86 LRLKNVQLTDAGTYKCYIITSKGKGNANLEYKTG 119 (125)
T ss_dssp EEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEECCCChHHCEEEEEEEEeCCCeEEEEEEEEEC
Confidence 9999999999999999999999888888888873
No 497
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.44 E-value=1.1e-12 Score=94.99 Aligned_cols=128 Identities=18% Similarity=0.274 Sum_probs=80.1
Q ss_pred CCeeeecCCCeEEEEEEEeeCCCCeEEEEECC--Eec----c--------c--CCcceEEEcCCCCceeeEEEEccCCCC
Q psy7036 119 PSIRQEDDGKRLLFECRIQADPAPTVIWSHSG--VQV----K--------E--DKRHKFSIDKDGHSYFASLEIIDVTIE 182 (254)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~--~~~----~--------~--~~~~~~~~~~~~~~~~~~l~i~~~~~~ 182 (254)
+..+.+.+|+.+.|.|.+.+.+.+.+.|+|.. ... . . ..+..+..... ....|.|.+++.+
T Consensus 8 p~~v~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~---~~~sL~I~~v~~~ 84 (245)
T 3nfj_J 8 PATLVQPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQD---RQFILSSKKLLLS 84 (245)
T ss_dssp CSEEEEETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEET---TEEEEEESSCCGG
T ss_pred CceEEecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCC---CEEEEEECCCChh
Confidence 44567889999999999998888999999832 110 0 0 01111111111 1247999999999
Q ss_pred CceeEEEEEEcCCC------cceEEEEEEEecCCCCCCCCCCCCeeec-CCccccccCCCCcEEEEEEEecc-CCC-cee
Q psy7036 183 DAGKYKVTAKNELG------ESNATISLNFDSDDAPVPGEGTKPVFTE-RPVTKQSDDDLNDIVIECRLVGE-PEP-TIS 253 (254)
Q Consensus 183 d~G~y~C~~~~~~~------~~~~~~~~~v~~~~~~~~~~~~~p~~~~-~~~~~~~~~g~~~~~l~C~~~~~-p~p-~~~ 253 (254)
|+|.|.|.+.+..+ .......+.|..... ...+|.+.. .+....+..|+ .+.|.|.+.|. |++ .++
T Consensus 85 D~G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~----~~~~P~v~~~~~~~~~~~~g~-~~~l~C~~~g~~p~~~~v~ 159 (245)
T 3nfj_J 85 DSGFYLCAWSVSVGAGVPTIYFGEGSWLTVVEDLN----KVFPPEVAVFEPSEAEISHTQ-KATLVCLATGFFPDHVELS 159 (245)
T ss_dssp GCEEEEEEEECCTTTSSCCCEECCCEEEEEESCGG----GCBCCEEEEEECCHHHHHHHS-EEEEEEEEEEEBSSCEEEE
T ss_pred hCEEEEEEEeeccCCCceeEEECCCeEEEEEcccC----CCCCCceEeecCCcccccCCC-ceEEEEEEccCcCCCEEEE
Confidence 99999999998322 122334555553110 112444443 33443455588 99999999985 444 577
Q ss_pred C
Q psy7036 254 W 254 (254)
Q Consensus 254 W 254 (254)
|
T Consensus 160 W 160 (245)
T 3nfj_J 160 W 160 (245)
T ss_dssp E
T ss_pred E
Confidence 8
No 498
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=99.44 E-value=8e-13 Score=83.55 Aligned_cols=96 Identities=16% Similarity=0.326 Sum_probs=68.3
Q ss_pred CCCccccCCCeeeecCCCeEEEEEEEeeC--CCCeEEEEECCEecccCCcceEEEc-CC---CCceeeEEEEccCCCCCc
Q psy7036 111 LAPTFLKKPSIRQEDDGKRLLFECRIQAD--PAPTVIWSHSGVQVKEDKRHKFSID-KD---GHSYFASLEIIDVTIEDA 184 (254)
Q Consensus 111 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~--~~~~~~W~~~~~~~~~~~~~~~~~~-~~---~~~~~~~l~i~~~~~~d~ 184 (254)
.+|.+...+....+..|+.+.|.|.+.+. +.+.+.|++++..+........... .. .....+.|.|.+++.+|+
T Consensus 9 ~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 88 (112)
T 3so5_A 9 PXPQITVQPETQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEFTSE 88 (112)
T ss_dssp CSCEEEECCCCEEECTTCCEEEEEEEEESCCCCCEEEEEETTEECTTCEEEEEEETTGGGSSCEEEEEEEEECSCCGGGC
T ss_pred CCCeEEeCCCCcEEECCCCEEEEEEEecCCCCCEEEEEccCCcccccccccceeeeeccCCCccccceEEEEeccccccC
Confidence 45566666666788899999999999865 4578999999988764321111111 00 111235899999999999
Q ss_pred eeEEEEEEcCCCc-ceEEEEEEE
Q psy7036 185 GKYKVTAKNELGE-SNATISLNF 206 (254)
Q Consensus 185 G~y~C~~~~~~~~-~~~~~~~~v 206 (254)
|.|+|.|.|..|. .+..+.|.|
T Consensus 89 G~Y~C~a~n~~g~~~s~~~~l~V 111 (112)
T 3so5_A 89 GXYQCVISNHFGSSYSVXAXLTI 111 (112)
T ss_dssp EEEEEEEEETTEEEECCCEEEEE
T ss_pred CeEEEEEEeCCCcEEEeEEEEEe
Confidence 9999999999887 345666654
No 499
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.43 E-value=1.5e-13 Score=98.72 Aligned_cols=127 Identities=19% Similarity=0.241 Sum_probs=78.7
Q ss_pred CCeeeecCCCeEEEEEEEeeCCC-C-eEEEEECC--Eec---c-------cCCcceEEEcCCCCceeeEEEEccCCCCCc
Q psy7036 119 PSIRQEDDGKRLLFECRIQADPA-P-TVIWSHSG--VQV---K-------EDKRHKFSIDKDGHSYFASLEIIDVTIEDA 184 (254)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~-~-~~~W~~~~--~~~---~-------~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 184 (254)
+....+..|+.+.|.|.+.+.+. + .+.|+|+. ..+ . .....++.....+ ....|.|.+++.+|+
T Consensus 26 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~L~I~~v~~~D~ 103 (234)
T 2j6e_L 26 PPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSG--TSASLAISGLRSEDE 103 (234)
T ss_dssp CSCCCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEET--TEEEEEEESCCSTTC
T ss_pred CCcEEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecC--CeEEEEECCCCHHHC
Confidence 45567889999999999887543 4 69999863 211 0 0001112211111 123799999999999
Q ss_pred eeEEEEEEcCCCc---ceEEEEEEEecCCCCCCCCCCCCeeecCCccccccCCCCcEEEEEEEeccC-C-CceeC
Q psy7036 185 GKYKVTAKNELGE---SNATISLNFDSDDAPVPGEGTKPVFTERPVTKQSDDDLNDIVIECRLVGEP-E-PTISW 254 (254)
Q Consensus 185 G~y~C~~~~~~~~---~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~l~C~~~~~p-~-p~~~W 254 (254)
|.|+|.+.|..+. ......+.|.... ..+|.+...+....+.+|+ .+.|.|.+.|.+ + +.++|
T Consensus 104 G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~------~~~p~v~~~~~~~~~~~g~-~v~L~C~~~g~~p~~~~v~W 171 (234)
T 2j6e_L 104 ADYYCATWDDSLSAVIFGGGTKLTVLGQP------KAAPSVTLFPPSSEELQAN-KATLVCLISDFFPGAVTVAW 171 (234)
T ss_dssp SEEEEEEEETTTTEEEECCCBCCCBCCCC------CCCCCCCEECCCHHHHTTS-CCCEEECCCBCSSCCCEEEE
T ss_pred EEEEEEEEcCCcceeEecCCEEEEEecCC------CCCCcccccCCChhHhcCC-ceEEEEEEEEEcCCceEEEE
Confidence 9999999998772 1223344443211 1244444433333345687 999999999864 4 37888
No 500
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.43 E-value=2.7e-12 Score=79.93 Aligned_cols=89 Identities=21% Similarity=0.388 Sum_probs=68.7
Q ss_pred CCCccccCCCeeeecCCCeEEEEEEEeeCCCCeEEEEECCEecccCCcceEEEcCCCCceeeEEEEccCCCCCceeEEEE
Q psy7036 111 LAPTFLKKPSIRQEDDGKRLLFECRIQADPAPTVIWSHSGVQVKEDKRHKFSIDKDGHSYFASLEIIDVTIEDAGKYKVT 190 (254)
Q Consensus 111 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~ 190 (254)
.+|.+...+....+.+|+.+.|.|.. +.|.+.+.|+|++..+....+..+.. ++. ...|.|.+++.+|+|.|+|.
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~-~~p~~~v~W~k~~~~l~~~~~~~~~~--~~~--~~~L~I~~v~~~D~G~Y~C~ 81 (103)
T 2dku_A 7 GANCFTEELTNLQVEEKGTAVFTCKT-EHPAATVTWRKGLLELRASGKHQPSQ--EGL--TLRLTISALEKADSDTYTCD 81 (103)
T ss_dssp CCCCCSSCCCCEEEETTSEEEEEEEC-SSCCSCCEEEESSCBCCSSSSEEEEE--ETT--EEEEEEESCCTTTCSEEEEE
T ss_pred CCCEeEecCCcEEEeCCCcEEEEEEe-CCCCCeEEEEeCCEECCCCCeEEEEe--CCC--EEEEEECCCCcccCEEEEEE
Confidence 45666666777889999999999994 88888999999999887665544432 221 13799999999999999998
Q ss_pred EEcCCCcceEEEEEEEec
Q psy7036 191 AKNELGESNATISLNFDS 208 (254)
Q Consensus 191 ~~~~~~~~~~~~~~~v~~ 208 (254)
.|.......|.|..
T Consensus 82 ----~g~~~~~~~l~V~~ 95 (103)
T 2dku_A 82 ----IGQAQSRAQLLVQG 95 (103)
T ss_dssp ----CSSCBCCEEEEEEC
T ss_pred ----eCCceEEEEEEEeC
Confidence 56666667777765
Done!