Query psy7040
Match_columns 716
No_of_seqs 371 out of 3444
Neff 11.5
Searched_HMMs 29240
Date Sat Aug 17 01:27:51 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7040.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7040hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zlg_A Anosmin 1; insulin-like 100.0 2.1E-34 7.2E-39 312.9 47.3 445 55-637 160-670 (680)
2 2v5y_A Receptor-type tyrosine- 100.0 7.5E-34 2.6E-38 313.7 39.8 501 111-701 124-702 (731)
3 3l5h_A Interleukin-6 receptor 100.0 5.5E-35 1.9E-39 316.0 27.9 455 57-701 105-588 (589)
4 3b43_A Titin; I-SET IG fold, e 100.0 4.9E-32 1.7E-36 290.4 41.5 485 173-700 49-570 (570)
5 1zlg_A Anosmin 1; insulin-like 100.0 4.6E-31 1.6E-35 286.6 43.5 446 195-714 133-643 (680)
6 1e07_A Carcinoembryonic antige 100.0 8.2E-30 2.8E-34 278.5 52.4 529 110-700 71-640 (642)
7 1fnf_A Fibronectin; RGD, extra 100.0 3.6E-31 1.2E-35 268.2 36.8 339 55-414 2-361 (368)
8 3t1w_A Four-domain fibronectin 100.0 1.5E-30 5.2E-35 264.2 36.6 338 54-411 2-360 (375)
9 1fnf_A Fibronectin; RGD, extra 100.0 1.6E-29 5.5E-34 256.1 36.8 346 222-693 1-358 (368)
10 3l5h_A Interleukin-6 receptor 100.0 2E-31 6.9E-36 288.1 22.9 412 12-604 102-585 (589)
11 2v5y_A Receptor-type tyrosine- 100.0 1.8E-30 6.1E-35 286.8 29.2 284 49-411 256-555 (731)
12 3t1w_A Four-domain fibronectin 100.0 3.8E-29 1.3E-33 253.9 33.7 349 222-694 2-361 (375)
13 2jll_A NCAM2, neural cell adhe 100.0 1.3E-27 4.5E-32 244.3 37.7 297 110-413 63-380 (389)
14 3dmk_A DOWN syndrome cell adhe 100.0 2.4E-27 8.3E-32 266.6 39.1 581 62-702 147-811 (816)
15 1e07_A Carcinoembryonic antige 100.0 3.4E-26 1.2E-30 249.9 44.1 463 184-703 70-560 (642)
16 3b43_A Titin; I-SET IG fold, e 100.0 2.9E-26 1E-30 245.6 41.4 462 110-604 61-568 (570)
17 3dmk_A DOWN syndrome cell adhe 100.0 9.7E-27 3.3E-31 261.7 38.0 546 110-703 94-716 (816)
18 3r8q_A Fibronectin; heparin, F 100.0 2.1E-26 7.1E-31 224.3 30.6 261 55-410 21-283 (290)
19 2jll_A NCAM2, neural cell adhe 100.0 7E-26 2.4E-30 231.5 31.1 325 173-601 51-380 (389)
20 1tdq_A Tenascin-R; extracellul 99.9 3.1E-25 1E-29 215.4 29.6 261 52-411 12-277 (283)
21 3se4_A Interferon alpha/beta r 99.9 3.5E-26 1.2E-30 233.7 23.3 370 54-608 7-409 (414)
22 1tdq_A Tenascin-R; extracellul 99.9 8.8E-24 3E-28 205.1 29.4 269 215-601 7-279 (283)
23 3r8q_A Fibronectin; heparin, F 99.9 9.2E-24 3.2E-28 205.6 28.4 266 221-600 19-285 (290)
24 3l5i_A Interleukin-6 receptor 99.9 1.2E-24 4.1E-29 212.1 21.6 255 68-413 22-283 (290)
25 2dtg_E Insulin receptor; IR ec 99.9 1.1E-25 3.7E-30 251.2 13.5 285 59-419 473-887 (897)
26 3v2a_R Vascular endothelial gr 99.9 7.3E-26 2.5E-30 253.5 10.1 554 110-705 86-761 (772)
27 3se4_A Interferon alpha/beta r 99.9 1.7E-23 5.9E-28 213.7 22.2 365 223-703 8-410 (414)
28 2ec8_A MAST/stem cell growth f 99.9 7.3E-23 2.5E-27 217.6 26.3 452 203-708 17-518 (524)
29 2ocw_A Polymeric-immunoglobuli 99.9 5.9E-20 2E-24 198.3 45.9 414 175-702 63-548 (585)
30 2dtg_E Insulin receptor; IR ec 99.9 1.5E-24 5E-29 242.1 8.4 350 230-606 475-886 (897)
31 1i1r_A GP130, interleukin-6 re 99.9 2.4E-22 8.2E-27 196.6 23.1 229 183-421 63-299 (303)
32 3l5i_A Interleukin-6 receptor 99.9 1.7E-22 6E-27 196.7 20.6 274 221-605 2-287 (290)
33 3lpw_A A77-A78 domain from tit 99.9 1.6E-21 5.5E-26 177.9 23.9 193 220-419 3-195 (197)
34 2vkw_A Neural cell adhesion mo 99.9 9.3E-22 3.2E-26 180.9 19.2 191 217-413 3-196 (209)
35 2q7n_A Leukemia inhibitory fac 99.9 8.1E-21 2.8E-25 193.4 27.7 389 16-417 7-480 (488)
36 2d9q_B Granulocyte colony-stim 99.9 2.7E-21 9.3E-26 190.0 22.2 235 185-427 61-311 (313)
37 3bpo_C Interleukin-13 receptor 99.9 7.6E-20 2.6E-24 179.5 29.2 282 55-419 4-308 (314)
38 3lpw_A A77-A78 domain from tit 99.9 2.7E-20 9.3E-25 169.7 23.8 187 56-317 7-194 (197)
39 3s98_A Interferon alpha/beta r 99.9 7.5E-21 2.6E-25 184.6 20.9 273 54-416 3-298 (306)
40 3qs9_E FL cytokine receptor; i 99.9 1.3E-20 4.5E-25 197.6 24.3 409 230-701 56-511 (527)
41 1cfb_A Drosophila neuroglian; 99.9 1.4E-20 4.8E-25 172.4 21.4 187 219-411 2-193 (205)
42 2ibg_A CG9211-PA, GH03927P; IH 99.9 2.4E-20 8.1E-25 172.3 22.7 193 223-417 2-209 (214)
43 2q7n_A Leukemia inhibitory fac 99.9 1.3E-18 4.6E-23 177.2 37.4 430 226-703 7-487 (488)
44 2ocw_A Polymeric-immunoglobuli 99.9 1.1E-17 3.6E-22 180.7 45.2 386 110-517 75-545 (585)
45 2rik_A Titin; I-SET IG fold, p 99.9 7.8E-20 2.7E-24 177.5 24.9 257 425-700 5-284 (284)
46 3lb6_C IL-13, interleukin-13 r 99.9 1.5E-20 5.2E-25 188.0 19.7 284 54-418 31-330 (380)
47 2vkw_A Neural cell adhesion mo 99.9 2E-20 6.9E-25 171.9 17.9 182 57-313 11-197 (209)
48 2ibg_A CG9211-PA, GH03927P; IH 99.9 5E-20 1.7E-24 170.1 20.5 191 55-314 2-207 (214)
49 2nzi_A Titin; IG-domain, FNIII 99.8 2.6E-19 8.9E-24 175.9 25.5 263 425-705 4-296 (305)
50 2ec8_A MAST/stem cell growth f 99.8 4.6E-19 1.6E-23 188.3 28.9 395 183-610 78-514 (524)
51 2nzi_A Titin; IG-domain, FNIII 99.8 1.5E-19 5.1E-24 177.6 23.1 218 381-612 61-297 (305)
52 1z7z_I Intercellular adhesion 99.8 3.1E-19 1.1E-23 185.9 25.6 415 232-701 9-450 (450)
53 3p4l_A Neogenin; iron homeosta 99.8 1.3E-19 4.4E-24 166.8 20.0 189 222-417 4-201 (211)
54 3f7q_A Integrin beta-4, GP150; 99.8 2E-19 6.8E-24 168.3 20.3 219 55-365 6-231 (234)
55 3laf_A Deleted in colorectal c 99.8 1.9E-19 6.4E-24 184.7 21.7 295 382-702 77-403 (403)
56 3fl7_A Ephrin receptor; ATP-bi 99.8 2.3E-20 7.9E-25 191.2 14.4 220 191-418 301-531 (536)
57 3f7q_A Integrin beta-4, GP150; 99.8 2.3E-19 7.8E-24 167.9 19.5 183 221-413 4-191 (234)
58 1n26_A IL-6 receptor alpha cha 99.8 2.2E-18 7.4E-23 169.9 27.1 227 184-421 59-295 (325)
59 3s98_A Interferon alpha/beta r 99.8 1.8E-19 6.1E-24 174.9 18.8 183 223-418 4-197 (306)
60 1cfb_A Drosophila neuroglian; 99.8 7.9E-19 2.7E-23 160.7 22.2 181 55-311 6-194 (205)
61 2rcj_C Light chain; immunoglob 99.8 6.4E-17 2.2E-21 171.8 39.6 386 279-689 68-513 (523)
62 1bqu_A Protein (GP130); cytoki 99.8 2.3E-19 7.7E-24 165.8 17.2 200 220-427 5-209 (215)
63 3kld_A Contactin 4, axcam, BIG 99.8 5.1E-19 1.7E-23 179.5 19.9 293 383-700 63-383 (384)
64 3p4l_A Neogenin; iron homeosta 99.8 1.1E-18 3.7E-23 160.6 19.1 184 55-313 5-198 (211)
65 3v2a_R Vascular endothelial gr 99.8 1.7E-20 5.8E-25 210.0 7.3 477 109-612 182-762 (772)
66 1i1r_A GP130, interleukin-6 re 99.8 5.9E-18 2E-22 165.3 23.9 244 434-702 12-301 (303)
67 3lb6_C IL-13, interleukin-13 r 99.8 1.5E-18 5E-23 173.7 18.2 304 195-605 7-332 (380)
68 2yd9_A Receptor-type tyrosine- 99.8 3.5E-18 1.2E-22 167.5 20.7 258 425-704 6-295 (304)
69 2gee_A Hypothetical protein; f 99.8 4.9E-18 1.7E-22 154.7 20.1 176 221-411 22-197 (203)
70 3qs7_E FL cytokine receptor; i 99.8 1.7E-18 5.8E-23 176.7 18.5 290 383-708 104-422 (423)
71 3qs9_E FL cytokine receptor; i 99.8 2.9E-18 1E-22 179.8 20.5 377 185-606 103-510 (527)
72 3bpo_C Interleukin-13 receptor 99.8 1.9E-17 6.5E-22 162.4 24.3 285 223-604 4-308 (314)
73 1cs6_A Axonin-1; neural cell a 99.8 5E-18 1.7E-22 172.6 20.9 293 382-700 61-382 (382)
74 3kld_A Contactin 4, axcam, BIG 99.8 4.4E-18 1.5E-22 172.6 20.1 308 184-517 61-382 (384)
75 1qr4_A Protein (tenascin); fib 99.8 1.2E-17 4.3E-22 150.0 20.5 173 219-410 3-175 (186)
76 1bqu_A Protein (GP130); cytoki 99.8 1.7E-18 5.7E-23 159.9 13.3 194 57-326 10-209 (215)
77 2ha1_A Fibronectin; beta sandw 99.8 3.8E-18 1.3E-22 155.5 15.3 176 225-410 2-193 (201)
78 1qr4_A Protein (tenascin); fib 99.8 1.8E-17 6.3E-22 148.9 19.2 171 54-311 6-177 (186)
79 2y25_A Myomesin; structural pr 99.8 6.5E-17 2.2E-21 159.8 24.9 251 424-701 6-316 (317)
80 2d9q_B Granulocyte colony-stim 99.8 2E-17 7E-22 162.3 21.0 252 435-707 9-312 (313)
81 3mtr_A N-CAM-1, NCAM-1, neural 99.8 2.8E-17 9.5E-22 151.8 20.5 176 425-609 19-212 (215)
82 2gee_A Hypothetical protein; f 99.8 1.2E-17 4.2E-22 152.0 17.5 174 54-311 22-198 (203)
83 3p3y_A Neurofascin; IG domains 99.8 3.6E-17 1.2E-21 167.8 21.6 287 388-700 83-403 (404)
84 2wim_A N-CAM 2, NCAM2, neural 99.8 3.6E-17 1.2E-21 159.4 20.4 251 433-703 11-287 (291)
85 2ha1_A Fibronectin; beta sandw 99.8 1.1E-17 3.8E-22 152.4 15.4 185 57-312 2-196 (201)
86 3p3y_A Neurofascin; IG domains 99.7 6.5E-17 2.2E-21 165.9 21.9 315 183-517 71-402 (404)
87 2gys_A Cytokine receptor commo 99.7 1.2E-16 4E-21 163.5 22.7 277 54-418 108-415 (419)
88 2rcj_C Light chain; immunoglob 99.7 2.8E-15 9.6E-20 159.1 33.4 402 174-594 59-512 (523)
89 1bih_A Hemolin; insect immunit 99.7 1E-16 3.4E-21 163.9 21.1 308 183-516 60-394 (395)
90 1cs6_A Axonin-1; neural cell a 99.7 1.5E-16 5.2E-21 161.6 22.1 305 184-517 60-381 (382)
91 4fqp_A Poliovirus receptor; im 99.7 2.8E-16 9.4E-21 154.7 23.1 252 434-702 8-306 (313)
92 3fl7_A Ephrin receptor; ATP-bi 99.7 5.4E-17 1.9E-21 166.3 18.4 219 290-607 304-532 (536)
93 3e0g_A Leukemia inhibitory fac 99.7 1.9E-15 6.5E-20 152.5 29.1 363 39-415 66-473 (483)
94 1cd9_B G-CSF-R, protein (G-CSF 99.7 1.9E-16 6.5E-21 145.9 19.7 194 221-421 3-211 (215)
95 3qs7_E FL cytokine receptor; i 99.7 4.4E-16 1.5E-20 158.8 24.1 247 435-703 57-326 (423)
96 2gys_A Cytokine receptor commo 99.7 5.6E-16 1.9E-20 158.4 23.4 209 190-404 77-310 (419)
97 2y23_A Myomesin; structural pr 99.7 3.2E-16 1.1E-20 154.4 20.6 247 435-699 10-311 (312)
98 1qz1_A Neural cell adhesion mo 99.7 1.7E-16 5.7E-21 154.6 18.1 249 433-700 9-290 (291)
99 3n06_B PRL-R, prolactin recept 99.7 5.2E-16 1.8E-20 142.3 20.0 185 221-413 2-197 (210)
100 4fom_A Poliovirus receptor-rel 99.7 2.3E-16 7.7E-21 155.0 18.8 252 435-703 8-303 (308)
101 1z7z_I Intercellular adhesion 99.7 7.2E-17 2.5E-21 167.9 15.6 379 184-604 49-447 (450)
102 1bih_A Hemolin; insect immunit 99.7 4.7E-16 1.6E-20 158.9 21.2 362 220-602 4-392 (395)
103 3laf_A Deleted in colorectal c 99.7 2.9E-15 1E-19 153.4 27.3 351 232-608 31-403 (403)
104 2v5m_A Dscam; neurobiology SPL 99.7 1.8E-15 6.2E-20 154.0 25.4 307 183-516 57-387 (388)
105 1ry7_B FGFR-3, fibroblast grow 99.7 1.5E-17 5.3E-22 165.5 6.9 261 433-705 15-332 (334)
106 2v5m_A Dscam; neurobiology SPL 99.7 1.9E-14 6.5E-19 146.4 28.9 303 280-602 58-385 (388)
107 1wio_A CD4, T-cell surface gly 99.7 1.2E-16 4.2E-21 160.8 11.4 259 380-699 65-362 (363)
108 1wio_A CD4, T-cell surface gly 99.7 5.4E-16 1.8E-20 156.1 15.0 248 435-700 3-293 (363)
109 3rjd_A High affinity immunoglo 99.7 2.6E-15 9E-20 143.5 18.5 230 435-698 10-258 (262)
110 3uto_A Twitchin; kinase, muscl 99.7 3.8E-15 1.3E-19 156.6 20.4 95 54-148 9-103 (573)
111 4dep_C Interleukin-1 receptor 99.7 1.5E-15 5.1E-20 152.1 16.2 253 433-700 14-333 (349)
112 2rik_A Titin; I-SET IG fold, p 99.6 3.2E-14 1.1E-18 137.8 24.4 231 173-516 49-282 (284)
113 1cd9_B G-CSF-R, protein (G-CSF 99.6 7E-15 2.4E-19 135.4 18.3 190 55-320 3-211 (215)
114 2o26_X MAST/stem cell growth f 99.6 1.4E-15 5E-20 147.7 14.3 243 425-702 12-290 (290)
115 3oq3_B IFN-alpha/beta binding 99.6 5.7E-15 2E-19 146.2 18.4 242 434-698 37-328 (329)
116 3u83_A Poliovirus receptor-rel 99.6 5.1E-15 1.7E-19 147.0 17.4 261 431-705 19-325 (331)
117 3n06_B PRL-R, prolactin recept 99.6 1.2E-14 4.2E-19 133.1 18.0 178 58-312 7-197 (210)
118 3mtr_A N-CAM-1, NCAM-1, neural 99.6 1.2E-14 4.1E-19 134.0 17.5 138 174-313 65-205 (215)
119 1n26_A IL-6 receptor alpha cha 99.6 1E-13 3.5E-18 136.4 24.8 240 436-700 16-295 (325)
120 2oz4_A Intercellular adhesion 99.6 1.5E-14 5.2E-19 138.2 17.9 233 436-701 13-265 (265)
121 3ejj_X Macrophage colony-stimu 99.6 1.2E-14 4.2E-19 141.1 17.0 243 432-702 10-283 (289)
122 4go6_B HCF C-terminal chain 1; 99.6 2.7E-15 9.2E-20 139.0 11.3 156 82-311 18-193 (232)
123 1qgc_4 Protein (immunoglobulin 99.6 1.5E-14 5.1E-19 149.9 17.9 302 380-696 73-435 (438)
124 1itb_B Type 1 interleukin-1 re 99.6 8.6E-16 2.9E-20 151.4 7.7 247 435-700 14-314 (315)
125 3e0g_A Leukemia inhibitory fac 99.6 2.3E-12 7.8E-17 130.2 29.8 421 238-703 10-482 (483)
126 3vh8_G Killer cell immunoglobu 99.6 2E-14 6.9E-19 141.4 14.4 240 436-702 33-315 (316)
127 2wng_A Tyrosine-protein phosph 99.6 2.2E-13 7.6E-18 134.7 21.2 241 433-691 10-310 (327)
128 4go6_B HCF C-terminal chain 1; 99.6 4.7E-15 1.6E-19 137.4 8.1 155 252-412 19-193 (232)
129 3mjg_X Beta-type platelet-deri 99.5 2.7E-14 9.3E-19 138.6 12.8 251 434-708 8-286 (289)
130 3o4o_C Interleukin-1 receptor 99.5 1.3E-14 4.6E-19 144.5 10.1 248 433-698 25-333 (339)
131 2wim_A N-CAM 2, NCAM2, neural 99.5 5.6E-13 1.9E-17 129.5 20.5 229 173-517 48-283 (291)
132 4dkd_C Macrophage colony-stimu 99.5 2.5E-14 8.4E-19 139.2 10.7 253 425-705 4-286 (292)
133 3lqm_A Interleukin-10 receptor 99.5 4.2E-13 1.4E-17 120.9 16.4 179 225-418 4-193 (201)
134 2j8h_A Titin, connectin; cardi 99.5 2.7E-12 9.2E-17 116.4 21.4 185 425-700 4-197 (197)
135 3qt2_A Interleukin-5 receptor 99.5 8.4E-11 2.9E-15 112.9 32.5 277 55-418 12-312 (317)
136 1iga_A IGA1; immunoglobulin; N 99.5 2.4E-11 8.3E-16 126.8 31.2 296 380-690 78-444 (475)
137 3lcy_A Titin; A-BAND, IG tande 99.5 4.6E-12 1.6E-16 114.8 22.4 176 433-700 14-196 (197)
138 1bpv_A Titin, A71, connectin; 99.5 9.4E-14 3.2E-18 111.0 9.6 95 54-148 10-107 (112)
139 1qgc_4 Protein (immunoglobulin 99.5 9.5E-14 3.2E-18 143.8 12.2 326 174-514 64-435 (438)
140 1wfu_A Unnamed protein product 99.5 2.6E-13 9E-18 108.9 11.0 97 54-150 15-115 (120)
141 2y23_A Myomesin; structural pr 99.5 1.1E-12 3.8E-17 128.9 18.0 248 173-516 46-310 (312)
142 2a38_A Titin; Z1Z2, structural 99.5 3.1E-12 1.1E-16 115.6 19.5 175 433-699 12-194 (194)
143 3lqm_A Interleukin-10 receptor 99.5 2.8E-12 9.7E-17 115.4 18.2 176 55-313 2-189 (201)
144 2yd1_A Tyrosine-protein phosph 99.4 1.4E-11 4.8E-16 113.0 21.9 193 425-706 6-206 (212)
145 1x5y_A Myosin binding protein 99.4 1.1E-12 3.8E-17 105.6 12.4 99 321-419 5-103 (111)
146 2y25_A Myomesin; structural pr 99.4 7.4E-13 2.5E-17 130.5 13.6 138 380-517 162-314 (317)
147 1axi_B HGHBP, growth hormone r 99.4 1.5E-12 5E-17 120.5 14.6 182 221-413 28-228 (236)
148 2crm_A Fibronectin type-III do 99.4 2.6E-12 9E-17 105.2 14.4 111 305-420 1-113 (120)
149 2crz_A Fibronectin type-III do 99.4 7.7E-13 2.6E-17 106.3 10.8 95 56-150 10-105 (110)
150 2yuw_A Myosin binding protein 99.4 1.6E-12 5.6E-17 104.5 12.6 92 57-148 10-103 (110)
151 1qz1_A Neural cell adhesion mo 99.4 1.5E-12 5E-17 126.5 14.7 225 279-517 60-289 (291)
152 3d85_D IL-12B, interleukin-12 99.4 5.5E-12 1.9E-16 121.4 18.3 218 183-415 49-302 (306)
153 1igt_B IGG2A intact antibody - 99.4 1.9E-12 6.4E-17 134.1 16.2 286 381-689 78-434 (444)
154 2ed9_A Netrin receptor DCC; tu 99.4 8.7E-13 3E-17 109.0 10.9 115 297-416 3-119 (124)
155 2crz_A Fibronectin type-III do 99.4 1.2E-12 4E-17 105.3 11.3 102 322-425 6-108 (110)
156 2yuw_A Myosin binding protein 99.4 1.9E-12 6.4E-17 104.1 12.4 98 323-420 6-103 (110)
157 3ejj_X Macrophage colony-stimu 99.4 9.9E-12 3.4E-16 120.5 19.6 227 181-517 47-280 (289)
158 3grw_A Fibroblast growth facto 99.4 3.6E-12 1.2E-16 119.8 15.8 189 433-711 22-229 (241)
159 1x3d_A Fibronectin type-III do 99.4 2.9E-12 1E-16 104.6 12.9 110 306-421 2-112 (118)
160 1bpv_A Titin, A71, connectin; 99.4 3.2E-13 1.1E-17 107.9 6.9 96 323-418 9-105 (112)
161 2o26_X MAST/stem cell growth f 99.4 2.9E-11 9.8E-16 117.2 22.1 254 231-516 21-286 (290)
162 3v6o_A Leptin receptor; recept 99.4 3.7E-11 1.3E-15 108.8 21.2 185 225-417 3-202 (206)
163 1x5x_A Fibronectin type-III do 99.4 3.4E-12 1.1E-16 102.4 12.3 94 55-148 8-102 (109)
164 2yd9_A Receptor-type tyrosine- 99.4 1.4E-11 4.9E-16 120.3 19.3 217 382-609 63-294 (304)
165 1x4z_A Biregional cell adhesio 99.4 9.8E-12 3.4E-16 101.8 15.2 101 319-420 12-114 (121)
166 1wfo_A Sidekick 2; FN3, cell a 99.4 7.5E-13 2.6E-17 110.4 8.5 116 298-416 3-119 (130)
167 2crm_A Fibronectin type-III do 99.4 4.1E-12 1.4E-16 104.0 12.7 92 56-147 19-112 (120)
168 1v5j_A KIAA1355 protein, RSGI 99.4 8.4E-13 2.9E-17 103.5 7.3 90 55-147 8-100 (108)
169 1hzh_H IGG, immunoglobulin hea 99.4 2.3E-11 8E-16 126.3 20.5 299 380-690 77-444 (457)
170 3ojm_B Fibroblast growth facto 99.4 6.6E-12 2.3E-16 117.1 14.7 185 434-708 27-229 (231)
171 1x5y_A Myosin binding protein 99.4 7.5E-12 2.5E-16 100.7 12.6 96 221-317 7-102 (111)
172 1x4x_A Fibronectin type-III do 99.4 6.3E-12 2.2E-16 100.0 11.9 92 56-149 9-100 (106)
173 2r15_A Myomesin-1; sarcomeric 99.4 3.6E-11 1.2E-15 110.3 18.7 187 440-701 16-211 (212)
174 2ic2_A CG9211-PA, GH03927P; IH 99.4 2.1E-12 7.3E-17 103.7 9.0 91 56-147 4-108 (115)
175 2haz_A N-CAM 1, neural cell ad 99.4 2.1E-12 7E-17 102.6 8.8 95 322-417 4-101 (105)
176 2v44_A NCAM2, neural cell adhe 99.3 5E-11 1.7E-15 107.1 18.8 74 434-508 10-84 (189)
177 2wv3_A Neuroplastin; igcam, me 99.3 8.7E-11 3E-15 105.5 20.4 164 435-699 11-189 (190)
178 1x3d_A Fibronectin type-III do 99.3 9.1E-12 3.1E-16 101.6 12.3 94 55-149 18-112 (118)
179 1wis_A KIAA1514 protein; FNIII 99.3 7.5E-12 2.6E-16 102.9 11.8 99 320-419 13-116 (124)
180 1x5f_A Neogenin; RGM binding, 99.3 6.7E-12 2.3E-16 102.9 11.3 98 320-418 13-111 (120)
181 2iep_A Muscle-specific kinase 99.3 7.8E-11 2.7E-15 106.1 19.5 176 425-702 7-192 (192)
182 1x4x_A Fibronectin type-III do 99.3 1.2E-11 4.1E-16 98.4 12.3 95 321-419 4-98 (106)
183 2yux_A Myosin-binding protein 99.3 2.7E-12 9.2E-17 104.9 8.5 105 208-314 3-107 (120)
184 2e3v_A Neural cell adhesion mo 99.3 5E-12 1.7E-16 103.5 9.9 93 323-416 6-101 (122)
185 4fom_A Poliovirus receptor-rel 99.3 4.6E-12 1.6E-16 124.1 11.5 220 380-610 72-304 (308)
186 1v5j_A KIAA1355 protein, RSGI 99.3 3.5E-12 1.2E-16 100.0 8.3 94 323-419 6-100 (108)
187 2yux_A Myosin-binding protein 99.3 3.6E-12 1.2E-16 104.1 8.6 92 53-144 16-108 (120)
188 2ed7_A Netrin receptor DCC; tu 99.3 2E-11 6.9E-16 99.8 13.1 97 321-418 14-110 (119)
189 1wfn_A Sidekick 2; FN3, cell a 99.3 6.7E-12 2.3E-16 102.6 10.1 97 317-414 10-106 (119)
190 1x4z_A Biregional cell adhesio 99.3 2.3E-11 7.7E-16 99.7 13.1 93 54-147 17-113 (121)
191 2db8_A Tripartite motif protei 99.3 3E-12 1E-16 102.4 7.6 83 65-148 21-103 (110)
192 1wf5_A Sidekick 2 protein; FNI 99.3 3.5E-12 1.2E-16 104.8 8.2 104 208-314 3-109 (121)
193 1iga_A IGA1; immunoglobulin; N 99.3 5.3E-10 1.8E-14 116.6 26.6 315 175-507 68-443 (475)
194 2yrz_A Integrin beta-4; GP150, 99.3 1.2E-11 4E-16 101.0 11.0 94 318-413 11-104 (118)
195 3bp6_B Programmed cell death 1 99.3 7E-11 2.4E-15 107.4 17.2 175 435-705 11-198 (202)
196 1x5x_A Fibronectin type-III do 99.3 2E-11 6.8E-16 97.9 11.9 97 323-421 6-103 (109)
197 1igy_B IGG1 intact antibody MA 99.3 2.2E-12 7.4E-17 133.1 7.8 293 381-690 77-425 (434)
198 1x5g_A Neogenin; RGM binding, 99.3 4.3E-11 1.5E-15 97.3 14.0 96 323-422 16-111 (116)
199 4dep_C Interleukin-1 receptor 99.3 6.9E-12 2.4E-16 125.3 10.9 234 184-517 78-332 (349)
200 2e7h_A Ephrin type-B receptor 99.3 1.9E-11 6.5E-16 97.9 11.4 95 321-419 4-101 (109)
201 4fqp_A Poliovirus receptor; im 99.3 1.9E-10 6.6E-15 112.7 21.1 125 383-517 178-303 (313)
202 1wfu_A Unnamed protein product 99.3 5.4E-12 1.8E-16 101.3 8.0 99 216-317 9-111 (120)
203 1igt_B IGG2A intact antibody - 99.3 1.2E-10 4.2E-15 120.3 20.6 252 435-696 9-337 (444)
204 3knb_B Obscurin-like protein 1 99.3 2.1E-11 7.3E-16 96.6 11.4 92 425-517 13-104 (107)
205 1zvo_C Myeloma immunoglobulin 99.3 3.7E-09 1.3E-13 110.9 31.7 306 381-700 79-505 (512)
206 3mjg_X Beta-type platelet-deri 99.3 1.1E-10 3.8E-15 113.0 18.8 220 280-517 50-277 (289)
207 3knb_A Titin; IG-like, titin, 99.3 4.5E-11 1.5E-15 93.5 12.9 92 425-517 5-98 (100)
208 1wf5_A Sidekick 2 protein; FNI 99.3 2.2E-11 7.7E-16 99.9 11.6 94 323-418 16-112 (121)
209 2haz_A N-CAM 1, neural cell ad 99.3 1.1E-11 3.9E-16 98.3 9.3 87 59-146 11-102 (105)
210 1eer_B Epobp, erythropoietin r 99.3 6.7E-11 2.3E-15 109.1 15.8 172 224-404 22-202 (227)
211 2kbg_A N-CAM 2, neural cell ad 99.3 8.6E-12 2.9E-16 98.8 8.1 90 321-412 5-94 (114)
212 2edx_A Protein tyrosine phosph 99.3 3.7E-11 1.3E-15 100.7 12.5 107 317-423 10-120 (134)
213 2dm4_A Sortilin-related recept 99.3 1.8E-11 6.2E-16 97.9 10.0 95 323-421 6-102 (108)
214 1x5h_A Neogenin; RGM binding, 99.3 8E-12 2.7E-16 104.4 8.1 104 317-420 10-115 (132)
215 2ee2_A Contactin-1; neural cel 99.3 8.9E-11 3E-15 95.8 14.1 99 318-419 11-111 (119)
216 1axi_B HGHBP, growth hormone r 99.3 5.6E-11 1.9E-15 109.9 14.3 177 56-312 29-228 (236)
217 1vca_A VCAM-D1,2, human vascul 99.3 4.2E-10 1.5E-14 101.7 19.7 173 436-703 11-200 (202)
218 2wqr_A IG epsilon chain C regi 99.3 1.7E-11 5.8E-16 120.8 11.2 238 442-689 25-309 (323)
219 4dkd_C Macrophage colony-stimu 99.3 2.4E-11 8.2E-16 117.9 11.9 229 179-517 45-280 (292)
220 2v5t_A NCAM2, N-CAM 2, neural 99.3 2.7E-10 9.2E-15 102.2 17.9 174 433-700 9-188 (189)
221 4doh_B Interleukin-20 receptor 99.3 2.5E-10 8.6E-15 102.6 17.5 179 224-415 8-195 (206)
222 3t04_D Monobody 7C12; engineer 99.2 1.1E-10 3.9E-15 91.7 13.2 86 323-409 6-93 (103)
223 2djs_A Ephrin type-B receptor 99.2 3.5E-11 1.2E-15 96.3 10.3 96 321-418 4-99 (108)
224 2v9r_A Roundabout homolog 1; p 99.2 4.9E-11 1.7E-15 109.5 12.8 125 571-709 73-211 (212)
225 2ic2_A CG9211-PA, GH03927P; IH 99.2 2.4E-11 8.2E-16 97.6 9.2 93 323-419 4-108 (115)
226 2e3v_A Neural cell adhesion mo 99.2 4.8E-11 1.6E-15 97.5 11.2 105 221-329 6-113 (122)
227 3rbs_A Myomesin-1; immunoglobu 99.2 1.7E-10 5.8E-15 104.6 15.8 162 434-603 10-204 (207)
228 1uey_A KIAA0343 protein; immun 99.2 1.6E-11 5.6E-16 101.6 8.3 118 211-333 5-125 (127)
229 2kbg_A N-CAM 2, neural cell ad 99.2 1.1E-11 3.6E-16 98.2 6.7 76 66-142 19-96 (114)
230 2ed8_A Netrin receptor DCC; tu 99.2 4.7E-11 1.6E-15 95.1 10.5 93 323-419 6-98 (106)
231 1za6_B IGG heavy chain; immuno 99.2 2.1E-10 7.1E-15 114.0 17.6 245 435-691 9-332 (344)
232 1x5i_A Neogenin; RGM binding, 99.2 5.5E-11 1.9E-15 97.7 11.1 105 303-414 3-113 (126)
233 1ry7_B FGFR-3, fibroblast grow 99.2 2.7E-11 9.2E-16 120.2 11.1 226 280-517 60-326 (334)
234 1uem_A KIAA1568 protein; immun 99.2 6.5E-11 2.2E-15 96.4 11.4 97 321-419 12-109 (117)
235 1uey_A KIAA0343 protein; immun 99.2 9.6E-11 3.3E-15 96.9 12.6 92 323-416 15-108 (127)
236 2edb_A Netrin receptor DCC; tu 99.2 4.4E-11 1.5E-15 96.7 10.3 87 323-413 16-102 (116)
237 2e7c_A Myosin-binding protein 99.2 2.1E-10 7.2E-15 93.4 14.4 111 406-517 2-114 (118)
238 2djs_A Ephrin type-B receptor 99.2 7.8E-11 2.7E-15 94.2 11.6 92 56-148 9-101 (108)
239 1x5z_A Receptor-type tyrosine- 99.2 2.2E-11 7.7E-16 98.8 8.4 100 317-421 10-109 (115)
240 2edb_A Netrin receptor DCC; tu 99.2 6.5E-11 2.2E-15 95.7 11.0 86 56-143 19-104 (116)
241 1uem_A KIAA1568 protein; immun 99.2 4E-11 1.4E-15 97.6 9.9 93 54-147 15-109 (117)
242 1va9_A DOWN syndrome cell adhe 99.2 3.3E-11 1.1E-15 99.1 9.5 103 319-421 9-117 (122)
243 3s97_C Contactin-1; carbonic a 99.2 2E-10 6.8E-15 104.3 15.6 80 429-508 11-92 (201)
244 2dbj_A Proto-oncogene tyrosine 99.2 7.6E-11 2.6E-15 96.9 11.4 101 316-418 9-115 (124)
245 2dlh_A Receptor-type tyrosine- 99.2 1.5E-11 5.3E-16 100.9 7.0 114 305-424 1-118 (121)
246 2ed9_A Netrin receptor DCC; tu 99.2 1.1E-10 3.6E-15 96.3 12.1 90 57-146 31-121 (124)
247 4doh_B Interleukin-20 receptor 99.2 7.7E-10 2.6E-14 99.5 18.6 176 54-311 6-192 (206)
248 2e7h_A Ephrin type-B receptor 99.2 9E-11 3.1E-15 93.9 11.1 90 56-147 9-101 (109)
249 1f97_A Junction adhesion molec 99.2 2.5E-10 8.4E-15 104.7 15.6 70 433-506 8-89 (212)
250 2ed8_A Netrin receptor DCC; tu 99.2 6.5E-11 2.2E-15 94.3 10.1 90 57-148 10-99 (106)
251 1wis_A KIAA1514 protein; FNIII 99.2 4.5E-11 1.5E-15 98.2 9.4 95 221-317 16-115 (124)
252 1x4y_A Biregional cell adhesio 99.2 7.3E-11 2.5E-15 95.3 10.5 96 323-419 7-106 (114)
253 4doh_R Interleukin-20 receptor 99.2 9.8E-10 3.4E-14 99.9 19.1 184 224-417 10-210 (221)
254 2dn7_A Receptor-type tyrosine- 99.2 5.6E-11 1.9E-15 94.9 9.7 89 321-412 4-92 (107)
255 1j8k_A Fibronectin; EDA, TYPEI 99.2 7.1E-11 2.4E-15 91.5 9.9 84 55-142 2-87 (94)
256 3o4o_C Interleukin-1 receptor 99.2 2.1E-11 7.1E-16 121.3 8.4 228 184-514 80-331 (339)
257 2dju_A Receptor-type tyrosine- 99.2 1.2E-10 3.9E-15 93.0 11.1 90 56-148 9-99 (106)
258 2va4_A NCAM2, N-CAM 2, neural 99.2 8E-10 2.7E-14 99.4 18.1 164 433-602 11-189 (192)
259 1x5l_A Ephrin type-A receptor 99.2 3.7E-11 1.3E-15 96.8 8.2 98 319-418 5-102 (111)
260 3u83_A Poliovirus receptor-rel 99.2 1.7E-10 5.8E-15 114.2 14.6 123 383-517 195-319 (331)
261 2vr9_A Roundabout 1, ROBO; imm 99.2 2.1E-10 7.1E-15 105.6 14.2 82 425-507 9-94 (217)
262 2ed7_A Netrin receptor DCC; tu 99.2 1.8E-10 6E-15 94.2 12.2 92 55-147 18-111 (119)
263 3t04_D Monobody 7C12; engineer 99.2 3.1E-10 1.1E-14 89.2 13.1 83 54-137 7-93 (103)
264 1itb_B Type 1 interleukin-1 re 99.2 1.9E-10 6.6E-15 112.9 14.8 230 280-516 61-312 (315)
265 2dju_A Receptor-type tyrosine- 99.2 1.6E-10 5.5E-15 92.1 11.6 94 323-421 6-100 (106)
266 1uen_A KIAA0343 protein; immun 99.2 9.4E-11 3.2E-15 96.8 10.5 102 318-419 7-117 (125)
267 3b83_A Ten-D3; beta sheet, com 99.2 6E-11 2E-15 92.9 8.8 86 55-144 2-89 (100)
268 2yd6_A PTPRD protein; hydrolas 99.2 1.2E-09 4.2E-14 99.9 19.1 171 425-600 6-197 (212)
269 1x5g_A Neogenin; RGM binding, 99.2 2.4E-10 8.1E-15 92.9 12.6 91 56-148 19-109 (116)
270 1x4y_A Biregional cell adhesio 99.2 9.9E-11 3.4E-15 94.5 10.2 93 57-149 11-108 (114)
271 2ee3_A Collagen alpha-1(XX) ch 99.2 5.6E-11 1.9E-15 93.7 8.5 84 54-141 7-91 (108)
272 3n1f_C Cell adhesion molecule- 99.2 1.5E-10 5E-15 90.8 10.7 91 55-145 5-100 (102)
273 4fa8_A Secreted protein BARF1; 99.2 6.4E-10 2.2E-14 100.1 16.3 160 435-598 2-194 (203)
274 3qht_C Monobody YSMB-1; fibron 99.2 2.3E-10 8E-15 89.0 11.7 85 54-142 4-90 (97)
275 3qt2_A Interleukin-5 receptor 99.2 2.9E-08 9.9E-13 95.3 28.6 171 222-404 11-202 (317)
276 1hzh_H IGG, immunoglobulin hea 99.2 8.5E-11 2.9E-15 122.0 11.7 318 174-508 66-444 (457)
277 2dm4_A Sortilin-related recept 99.2 1.2E-10 4.1E-15 93.1 10.0 85 61-147 14-100 (108)
278 3qht_C Monobody YSMB-1; fibron 99.2 1.9E-10 6.4E-15 89.5 10.7 86 323-412 3-88 (97)
279 2w1n_A O-GLCNACASE NAGJ; hexos 99.2 1.7E-10 5.7E-15 97.7 10.8 112 280-411 117-229 (238)
280 1x5j_A Neogenin; RGM binding, 99.2 2E-10 6.7E-15 92.0 11.0 98 323-421 7-107 (113)
281 4f80_A Butyrophilin subfamily 99.2 1.7E-10 6E-15 106.8 12.3 118 570-701 83-214 (226)
282 2edd_A Netrin receptor DCC; tu 99.2 2E-10 6.8E-15 93.6 11.0 96 322-418 16-114 (123)
283 3k0w_A Mucosa-associated lymph 99.2 4E-10 1.4E-14 103.6 14.4 177 433-704 25-206 (218)
284 2ede_A Netrin receptor DCC; tu 99.2 3.3E-10 1.1E-14 91.7 12.2 91 57-148 11-107 (114)
285 1igy_B IGG1 intact antibody MA 99.2 2.3E-11 7.9E-16 125.4 6.7 310 183-508 76-425 (434)
286 2ede_A Netrin receptor DCC; tu 99.2 2E-10 6.9E-15 92.9 10.8 94 323-418 7-105 (114)
287 2c5d_C AXL oncogene, tyrosine- 99.2 1.5E-09 5.3E-14 97.8 17.7 166 433-604 9-191 (195)
288 3tes_A Tencon; fibronectin typ 99.1 1.5E-10 5E-15 90.0 9.0 83 55-141 2-86 (98)
289 2ny1_B T-cell surface glycopro 99.1 7E-11 2.4E-15 105.5 8.2 113 570-705 68-184 (184)
290 2cum_A Tenascin-X; hexabrachio 99.1 2.3E-10 7.8E-15 90.4 10.2 83 54-141 7-90 (105)
291 3vh8_G Killer cell immunoglobu 99.1 2.9E-09 9.9E-14 104.4 20.5 205 380-595 72-297 (316)
292 1x5j_A Neogenin; RGM binding, 99.1 2.1E-10 7.2E-15 91.9 10.0 95 55-149 9-107 (113)
293 1wj3_A KIAA1496 protein; beta 99.1 3.3E-10 1.1E-14 91.4 11.3 96 318-418 11-108 (117)
294 3n1f_C Cell adhesion molecule- 99.1 2.3E-10 7.7E-15 89.7 10.0 87 326-413 6-96 (102)
295 3oq3_B IFN-alpha/beta binding 99.1 8.9E-10 3E-14 108.7 16.8 222 279-516 87-328 (329)
296 3g9v_A Interleukin 22 receptor 99.1 7.7E-11 2.6E-15 106.2 8.3 170 226-404 11-194 (211)
297 1x5f_A Neogenin; RGM binding, 99.1 2.9E-10 9.9E-15 93.0 11.0 92 220-313 15-107 (120)
298 3g9v_A Interleukin 22 receptor 99.1 1.7E-10 5.6E-15 104.1 10.3 170 55-302 8-193 (211)
299 3b83_A Ten-D3; beta sheet, com 99.1 1.7E-10 5.7E-15 90.3 9.0 84 325-412 2-85 (100)
300 2w1n_A O-GLCNACASE NAGJ; hexos 99.1 4.5E-10 1.5E-14 95.2 11.9 78 56-139 152-229 (238)
301 2ee2_A Contactin-1; neural cel 99.1 8.7E-10 3E-14 89.8 13.6 92 56-150 20-114 (119)
302 2rb8_A Tenascin; beta sheet,lo 99.1 1.6E-10 5.4E-15 91.2 8.8 84 55-142 3-88 (104)
303 3rbs_A Myomesin-1; immunoglobu 99.1 5.4E-10 1.8E-14 101.3 13.5 126 382-515 61-204 (207)
304 2j8h_A Titin, connectin; cardi 99.1 8.3E-10 2.8E-14 99.8 14.7 135 381-517 61-196 (197)
305 2dn7_A Receptor-type tyrosine- 99.1 2.5E-10 8.6E-15 91.1 10.0 80 61-141 13-93 (107)
306 4doh_R Interleukin-20 receptor 99.1 4.2E-09 1.4E-13 95.7 19.3 180 54-312 8-206 (221)
307 1eer_B Epobp, erythropoietin r 99.1 5.1E-10 1.8E-14 103.1 13.2 169 57-303 23-202 (227)
308 3k2m_C Monobody HA4; engineere 99.1 4.1E-10 1.4E-14 88.2 10.7 79 55-135 5-85 (101)
309 2db8_A Tripartite motif protei 99.1 2.1E-10 7.1E-15 91.6 9.2 93 323-418 8-101 (110)
310 1x5a_A Ephrin type-A receptor 99.1 8.6E-10 3E-14 87.4 12.6 91 321-418 6-98 (107)
311 3rjd_A High affinity immunoglo 99.1 5.3E-09 1.8E-13 99.4 20.6 196 380-596 46-249 (262)
312 1x5l_A Ephrin type-A receptor 99.1 2.6E-10 9E-15 91.7 9.7 91 57-149 13-105 (111)
313 2gi7_A GPVI protein; IG-like d 99.1 2.9E-10 9.8E-15 101.3 10.9 58 437-505 18-75 (184)
314 2yrz_A Integrin beta-4; GP150, 99.1 4.3E-10 1.5E-14 91.6 11.0 89 221-312 16-104 (118)
315 1x5i_A Neogenin; RGM binding, 99.1 3E-10 1E-14 93.3 10.1 88 56-145 29-116 (126)
316 2dmk_A Midline 2 isoform 2; mi 99.1 2.2E-10 7.4E-15 94.3 8.8 89 55-147 16-116 (127)
317 2dkm_A Collagen alpha-1(XX) ch 99.1 6.5E-10 2.2E-14 87.7 11.1 85 54-144 8-95 (104)
318 2wng_A Tyrosine-protein phosph 99.1 9.6E-09 3.3E-13 101.2 22.1 214 379-598 71-311 (327)
319 3v6o_A Leptin receptor; recept 99.1 5.6E-09 1.9E-13 94.3 18.7 170 68-314 15-200 (206)
320 3r4d_A CEA-related cell adhesi 99.1 2.8E-10 9.7E-15 103.9 10.2 121 570-705 71-205 (208)
321 3k2m_C Monobody HA4; engineere 99.1 6.3E-10 2.2E-14 87.1 10.7 82 324-407 4-85 (101)
322 2edx_A Protein tyrosine phosph 99.1 8.2E-10 2.8E-14 92.4 12.2 110 222-336 17-132 (134)
323 1x5a_A Ephrin type-A receptor 99.1 9.1E-10 3.1E-14 87.2 11.6 86 57-148 12-100 (107)
324 2edd_A Netrin receptor DCC; tu 99.1 5.4E-10 1.8E-14 91.1 10.3 94 55-149 19-117 (123)
325 3uto_A Twitchin; kinase, muscl 99.1 5.2E-10 1.8E-14 117.7 12.9 97 323-421 8-104 (573)
326 2dbj_A Proto-oncogene tyrosine 99.1 3.4E-10 1.1E-14 93.0 9.1 90 58-148 22-117 (124)
327 1x5z_A Receptor-type tyrosine- 99.1 1.6E-10 5.6E-15 93.7 7.1 90 57-149 20-109 (115)
328 2edy_A Receptor-type tyrosine- 99.1 2.7E-10 9.1E-15 90.3 8.1 92 323-417 7-99 (103)
329 1wk0_A KIAA0970 protein; fibro 99.1 7.1E-10 2.4E-14 90.6 10.7 102 324-427 17-127 (137)
330 2a38_A Titin; Z1Z2, structural 99.1 1.4E-09 4.8E-14 98.0 13.6 133 380-516 61-193 (194)
331 2rb8_A Tenascin; beta sheet,lo 99.1 6.4E-10 2.2E-14 87.7 9.7 83 324-411 2-85 (104)
332 2cui_A Tenascin-X; fibronectin 99.1 7.2E-10 2.5E-14 87.8 10.0 82 56-141 10-101 (112)
333 1wk0_A KIAA0970 protein; fibro 99.1 1.3E-09 4.3E-14 89.2 11.6 93 57-149 20-121 (137)
334 1rhf_A Tyrosine-protein kinase 99.1 7.4E-09 2.5E-13 92.0 17.8 156 433-596 9-172 (182)
335 3teu_A Fibcon; FN3 domain, fib 99.1 1.1E-09 3.6E-14 85.6 10.6 82 325-410 2-83 (98)
336 3qp3_A Titin; I-SET IG-like, s 99.1 2E-09 7E-14 85.1 12.4 85 433-517 15-99 (103)
337 1j8k_A Fibronectin; EDA, TYPEI 99.1 5.6E-10 1.9E-14 86.4 8.9 82 326-411 3-84 (94)
338 2ocf_D Fibronectin; estrogen r 99.1 4.6E-10 1.6E-14 90.9 8.5 86 323-412 27-112 (121)
339 2cqv_A MLCK, myosin light chai 99.1 3.1E-09 1.1E-13 85.8 13.6 92 425-517 7-98 (114)
340 1uen_A KIAA0343 protein; immun 99.1 7.6E-10 2.6E-14 91.3 10.0 92 56-147 16-117 (125)
341 2r15_A Myomesin-1; sarcomeric 99.0 3.3E-09 1.1E-13 97.1 15.3 135 380-517 57-209 (212)
342 1wfo_A Sidekick 2; FN3, cell a 99.0 8.5E-10 2.9E-14 91.7 10.3 91 56-147 29-122 (130)
343 1x5h_A Neogenin; RGM binding, 99.0 5.5E-10 1.9E-14 93.2 9.1 109 222-331 17-130 (132)
344 3teu_A Fibcon; FN3 domain, fib 99.0 1.3E-09 4.3E-14 85.1 10.6 82 55-140 2-85 (98)
345 1ugn_A LIR1, leukocyte immunog 99.0 6.8E-10 2.3E-14 100.4 10.2 52 638-689 120-182 (198)
346 2lu7_A Obscurin-like protein 1 99.0 1E-09 3.5E-14 82.1 9.3 71 433-504 3-73 (84)
347 1nbq_A JAM, junctional adhesio 99.0 6.3E-10 2.2E-14 101.7 9.9 116 570-699 68-208 (209)
348 2cuh_A Tenascin-X; fibronectin 99.0 6E-10 2.1E-14 89.9 8.6 83 55-141 8-90 (115)
349 1va9_A DOWN syndrome cell adhe 99.0 6.1E-10 2.1E-14 91.4 8.8 91 57-147 18-115 (122)
350 3jz7_A MCAR, CAR, coxsackievir 99.0 3.4E-09 1.2E-13 97.2 14.8 170 434-607 8-213 (214)
351 2ee3_A Collagen alpha-1(XX) ch 99.0 1.1E-09 3.9E-14 86.2 9.8 86 323-413 6-91 (108)
352 1zvo_C Myeloma immunoglobulin 99.0 1.7E-07 5.9E-12 98.2 29.5 119 383-508 362-493 (512)
353 2dlh_A Receptor-type tyrosine- 99.0 3.4E-10 1.2E-14 92.8 7.1 91 57-148 21-114 (121)
354 2edy_A Receptor-type tyrosine- 99.0 2.7E-10 9.1E-15 90.2 6.1 86 58-144 12-98 (103)
355 3lcy_A Titin; A-BAND, IG tande 99.0 4.4E-09 1.5E-13 95.0 14.9 131 381-517 62-195 (197)
356 1fnl_A Low affinity immunoglob 99.0 2.8E-09 9.5E-14 94.0 13.2 60 435-504 16-76 (175)
357 4frw_A Poliovirus receptor-rel 99.0 1.6E-09 5.4E-14 99.7 12.1 116 570-699 79-210 (218)
358 2cum_A Tenascin-X; hexabrachio 99.0 1.7E-09 5.9E-14 85.3 10.1 82 323-410 6-87 (105)
359 1hng_A CD2; T lymphocyte adhes 99.0 2.8E-09 9.7E-14 93.8 12.7 150 435-602 5-172 (176)
360 3qwq_B Adnectin; cell surface 99.0 1.5E-09 5E-14 86.8 9.6 80 323-406 2-81 (114)
361 1hng_A CD2; T lymphocyte adhes 99.0 3.7E-10 1.3E-14 99.5 6.8 108 570-698 61-174 (176)
362 3qwq_B Adnectin; cell surface 99.0 2.4E-09 8.2E-14 85.5 10.8 75 56-134 5-81 (114)
363 2fbo_J V1V2;, variable region- 99.0 1.8E-09 6.3E-14 101.8 12.0 114 570-690 90-239 (250)
364 1wfn_A Sidekick 2; FN3, cell a 99.0 1.1E-09 3.9E-14 89.2 9.1 91 221-313 16-106 (119)
365 3sgj_C Human FCG3A receptor; r 99.0 2.1E-09 7.2E-14 97.3 11.7 158 436-612 17-180 (204)
366 3mj8_L Stimulatory hamster ant 99.0 3.7E-09 1.3E-13 96.8 13.4 116 570-694 70-207 (213)
367 3p2t_A Leukocyte immunoglobuli 99.0 6.3E-09 2.2E-13 93.7 14.7 151 437-594 15-179 (196)
368 2bk8_A Connectin, M1, titin he 99.0 7E-09 2.4E-13 80.8 13.0 85 433-517 8-93 (97)
369 3puc_A Titin; I-SET IG-like do 99.0 5.9E-09 2E-13 81.7 12.6 85 433-517 13-97 (99)
370 1wit_A Twitchin 18TH IGSF modu 99.0 2E-09 7E-14 83.1 9.7 89 425-516 2-92 (93)
371 1epf_A NCAM, protein (neural c 99.0 1.3E-08 4.6E-13 91.2 16.5 159 434-596 10-181 (191)
372 2yuz_A Myosin-binding protein 99.0 3.7E-09 1.3E-13 82.5 11.0 83 431-517 12-94 (100)
373 1ujt_A KIAA1568 protein; fibro 99.0 2.5E-09 8.5E-14 85.9 10.2 86 334-421 25-114 (120)
374 2yd6_A PTPRD protein; hydrolas 99.0 6.1E-09 2.1E-13 95.2 14.3 127 380-510 61-195 (212)
375 3mj6_A Junctional adhesion mol 99.0 3.1E-09 1E-13 101.4 12.7 117 570-700 84-237 (268)
376 2wv3_A Neuroplastin; igcam, me 99.0 1.5E-08 5E-13 90.8 16.3 129 381-517 55-189 (190)
377 1p6f_A NKP46, natural cytotoxi 99.0 1.2E-08 4.1E-13 94.8 16.1 68 638-705 121-196 (242)
378 4fa8_A Secreted protein BARF1; 99.0 4.8E-10 1.6E-14 101.0 6.2 125 379-510 66-194 (203)
379 2c1o_A IGK-C protein; FAB frag 99.0 1.9E-08 6.4E-13 95.0 17.5 108 389-506 11-137 (254)
380 1g1c_A Immunoglobulin-like dom 99.0 7.9E-09 2.7E-13 81.0 12.5 85 433-517 12-97 (99)
381 3sgj_C Human FCG3A receptor; r 99.0 2.8E-09 9.7E-14 96.5 11.2 131 551-705 40-179 (204)
382 3sbw_C Programmed cell death 1 99.0 7E-09 2.4E-13 95.7 14.0 119 570-704 80-215 (222)
383 2ifg_A High affinity nerve gro 99.0 1.3E-09 4.6E-14 108.2 9.4 137 551-702 190-347 (347)
384 3tes_A Tencon; fibronectin typ 99.0 3.1E-09 1.1E-13 82.5 9.4 80 327-410 4-83 (98)
385 2dkm_A Collagen alpha-1(XX) ch 99.0 3.4E-09 1.2E-13 83.5 9.6 84 323-411 7-90 (104)
386 1oll_A NK receptor; immune sys 99.0 1.4E-08 4.8E-13 90.6 14.9 50 638-687 118-172 (188)
387 2ekj_A Collagen alpha-1(XX) ch 99.0 3.3E-10 1.1E-14 89.6 3.7 88 323-414 6-93 (105)
388 2ocf_D Fibronectin; estrogen r 98.9 2.1E-09 7E-14 87.1 8.3 90 217-311 23-112 (121)
389 2v5t_A NCAM2, N-CAM 2, neural 98.9 6.6E-09 2.2E-13 93.1 12.6 131 381-517 56-187 (189)
390 2ekj_A Collagen alpha-1(XX) ch 98.9 2.7E-10 9.4E-15 90.1 3.0 87 55-145 8-96 (105)
391 3knb_B Obscurin-like protein 1 98.9 1.2E-09 4.1E-14 86.5 6.6 65 638-702 33-107 (107)
392 1gxe_A Myosin binding protein 98.9 3.3E-09 1.1E-13 88.1 9.5 85 432-516 24-137 (139)
393 1uc6_A CNTF receptor, ciliary 98.9 3.4E-09 1.1E-13 84.4 9.1 92 55-147 8-103 (109)
394 3irg_A Titin; IG-like, titin, 98.9 1.4E-08 4.7E-13 79.8 12.7 85 433-517 12-98 (100)
395 2yd1_A Tyrosine-protein phosph 98.9 9.2E-09 3.2E-13 94.0 13.4 129 382-517 64-199 (212)
396 1wj3_A KIAA1496 protein; beta 98.9 6E-09 2E-13 84.0 10.5 88 57-147 21-109 (117)
397 2erj_C Cytokine receptor commo 98.9 9.9E-08 3.4E-12 88.2 20.0 183 225-421 39-231 (247)
398 2dmk_A Midline 2 isoform 2; mi 98.9 5E-09 1.7E-13 86.1 10.1 81 323-408 14-106 (127)
399 4i0k_A CD276 antigen; immunogl 98.9 1E-09 3.4E-14 101.4 6.6 127 570-706 72-212 (222)
400 1waa_A Titin; metal binding pr 98.9 1.3E-08 4.3E-13 78.1 11.7 72 432-504 11-82 (93)
401 2oz4_A Intercellular adhesion 98.9 4.4E-09 1.5E-13 100.0 11.2 192 289-517 69-263 (265)
402 3d9a_L Light chain of hyhel10 98.9 1.2E-08 4.2E-13 93.3 13.7 118 570-696 71-209 (213)
403 1ujt_A KIAA1568 protein; fibro 98.9 4.7E-09 1.6E-13 84.3 9.3 85 64-150 25-115 (120)
404 1k85_A Chitinase A1; fibronect 98.9 7.2E-09 2.4E-13 78.8 9.8 78 57-142 6-84 (88)
405 2va4_A NCAM2, N-CAM 2, neural 98.9 1.6E-08 5.4E-13 90.8 13.7 130 379-516 55-191 (192)
406 2d3v_A Leukocyte immunoglobuli 98.9 6.8E-09 2.3E-13 93.5 11.2 151 437-594 15-180 (196)
407 3irg_B Obscurin-like protein 1 98.9 1.2E-08 4.2E-13 81.2 11.4 92 425-517 13-104 (107)
408 2ifg_A High affinity nerve gro 98.9 3.3E-09 1.1E-13 105.3 9.7 168 434-608 166-347 (347)
409 3ry4_A Low affinity immunoglob 98.9 1.3E-08 4.6E-13 89.2 12.4 59 435-503 13-72 (170)
410 1u2h_A APEG-1, aortic preferen 98.9 1.7E-08 5.7E-13 79.1 11.7 85 433-517 12-97 (99)
411 2cuh_A Tenascin-X; fibronectin 98.9 5E-09 1.7E-13 84.4 8.6 106 221-340 6-111 (115)
412 2kdg_A Myotilin; immonoglobuli 98.9 1.4E-08 4.8E-13 79.7 10.9 85 433-517 12-97 (100)
413 3jz7_A MCAR, CAR, coxsackievir 98.9 3.9E-09 1.3E-13 96.8 8.8 120 569-702 83-214 (214)
414 3b5h_A Cervical EMMPRIN, HAB18 98.9 2.2E-07 7.7E-12 82.5 20.1 122 383-516 52-181 (184)
415 2cqv_A MLCK, myosin light chai 98.9 2.4E-09 8.1E-14 86.5 6.3 74 638-711 27-110 (114)
416 1uc6_A CNTF receptor, ciliary 98.9 1.3E-08 4.6E-13 80.8 10.3 94 323-419 6-103 (109)
417 1dr9_A B7-1 (CD80), T lymphocy 98.9 1.5E-07 5.1E-12 85.0 18.7 73 435-508 3-91 (201)
418 2cui_A Tenascin-X; fibronectin 98.9 1.9E-08 6.5E-13 79.6 11.0 82 323-408 7-96 (112)
419 2x1w_L Vascular endothelial gr 98.9 2.4E-08 8.2E-13 91.2 13.4 170 433-608 14-209 (213)
420 2dle_A Receptor-type tyrosine- 98.9 1.2E-08 4.1E-13 79.5 9.5 80 56-139 9-88 (104)
421 2lvc_A Obscurin-like protein 1 98.9 1E-08 3.5E-13 77.9 9.0 68 436-504 16-83 (91)
422 2h41_A Fibronectin; beta sandw 98.9 4.9E-09 1.7E-13 79.5 7.0 77 60-140 11-89 (95)
423 1f97_A Junction adhesion molec 98.9 1.1E-08 3.9E-13 93.5 11.0 131 382-517 65-206 (212)
424 2iep_A Muscle-specific kinase 98.9 1.1E-08 3.7E-13 91.9 10.6 128 380-516 60-188 (192)
425 1he7_A High affinity nerve gro 98.9 1.6E-08 5.3E-13 81.2 10.2 78 440-517 14-98 (126)
426 1jbj_A CD3 epsilon and gamma e 98.8 9E-09 3.1E-13 91.6 9.7 132 551-690 29-179 (186)
427 3up1_A Interleukin-7 receptor 98.8 2.8E-07 9.5E-12 82.5 19.1 138 281-426 76-217 (223)
428 1nct_A Titin; cell adhesion, g 98.8 5.5E-09 1.9E-13 82.8 7.3 84 433-516 21-104 (106)
429 2b5i_C Cytokine receptor commo 98.8 3.1E-07 1.1E-11 82.3 19.6 177 230-419 5-191 (199)
430 2dm2_A Palladin; beta-sandwich 98.8 2.9E-08 9.8E-13 79.4 11.4 92 425-517 8-101 (110)
431 3s97_C Contactin-1; carbonic a 98.8 4E-08 1.4E-12 88.9 13.7 133 380-517 64-200 (201)
432 2d3v_A Leukocyte immunoglobuli 98.8 2.3E-08 7.9E-13 90.0 11.9 124 379-506 55-180 (196)
433 2ckn_A Basic fibroblast growth 98.8 2.2E-08 7.7E-13 77.5 9.8 86 425-516 9-94 (95)
434 2v44_A NCAM2, neural cell adhe 98.8 4.2E-08 1.4E-12 87.7 13.1 126 381-515 57-184 (189)
435 3p2t_A Leukocyte immunoglobuli 98.8 8.6E-08 2.9E-12 86.2 15.1 160 337-506 18-179 (196)
436 1epf_A NCAM, protein (neural c 98.8 2.6E-08 8.8E-13 89.3 11.5 128 379-515 59-188 (191)
437 2qbw_A PDZ-fibronectin fusion 98.8 8.5E-08 2.9E-12 85.7 14.7 86 325-414 104-189 (195)
438 2kkq_A Myotilin; unknown funct 98.8 9.3E-08 3.2E-12 77.1 13.2 92 425-517 15-108 (116)
439 1b6u_A KIR2DL3, P58 killer cel 98.8 1.2E-07 4.3E-12 88.6 15.7 65 638-704 126-205 (257)
440 1f2q_A High affinity immunoglo 98.8 1.7E-08 5.7E-13 89.1 9.1 158 434-609 12-174 (176)
441 1x44_A Myosin-binding protein 98.8 4.7E-08 1.6E-12 77.0 10.9 72 431-503 12-85 (103)
442 1uct_A Immunoglobulin alpha FC 98.8 2.1E-08 7.2E-13 91.7 9.9 152 436-593 18-180 (218)
443 1k85_A Chitinase A1; fibronect 98.8 3.1E-08 1.1E-12 75.2 9.2 80 323-412 2-82 (88)
444 1f2q_A High affinity immunoglo 98.8 1.7E-08 5.8E-13 89.0 8.8 129 551-703 37-174 (176)
445 3knb_A Titin; IG-like, titin, 98.8 1.1E-08 3.9E-13 79.7 6.7 63 638-700 25-99 (100)
446 3grw_A Fibroblast growth facto 98.8 4.1E-08 1.4E-12 91.8 11.9 136 380-517 70-217 (241)
447 2yuv_A Myosin-binding protein 98.8 5.6E-08 1.9E-12 76.1 10.7 88 425-517 7-94 (100)
448 1jbj_A CD3 epsilon and gamma e 98.8 7.2E-09 2.5E-13 92.2 5.9 145 438-596 11-179 (186)
449 1he7_A High affinity nerve gro 98.8 1.2E-08 4E-13 81.9 6.4 69 638-706 20-105 (126)
450 2c5d_C AXL oncogene, tyrosine- 98.8 1.3E-07 4.4E-12 85.0 14.2 122 382-516 68-191 (195)
451 2k1m_A Myosin-binding protein 98.7 1.3E-07 4.5E-12 73.1 12.2 79 433-516 15-93 (95)
452 1pd6_A Cardiac MYBP-C;, myosin 98.7 7.4E-08 2.5E-12 75.7 10.8 79 424-503 14-93 (104)
453 1rhf_A Tyrosine-protein kinase 98.7 1.5E-07 5E-12 83.5 14.1 120 382-516 60-181 (182)
454 3d85_D IL-12B, interleukin-12 98.7 6.5E-07 2.2E-11 86.0 19.4 217 440-693 20-298 (306)
455 3b5h_A Cervical EMMPRIN, HAB18 98.7 1.4E-07 4.7E-12 83.8 13.8 131 551-700 32-183 (184)
456 1fhg_A Telokin; immunoglobulin 98.7 1.2E-07 4.2E-12 81.0 12.8 85 433-517 48-133 (154)
457 3mpc_A FN3-like protein; fibro 98.7 4.6E-08 1.6E-12 75.9 9.0 84 57-145 5-92 (103)
458 2qbw_A PDZ-fibronectin fusion 98.7 1E-07 3.5E-12 85.1 12.6 85 56-144 105-191 (195)
459 2x1w_L Vascular endothelial gr 98.7 5.8E-08 2E-12 88.6 11.2 134 381-517 63-206 (213)
460 3pv7_A B7-H6, IG-like domain-c 98.7 3.8E-07 1.3E-11 85.5 17.1 168 433-603 10-221 (248)
461 3cx2_A Myosin-binding protein 98.7 1.8E-07 6E-12 74.4 12.5 86 432-517 10-107 (108)
462 1wwb_X Protein (brain derived 98.7 7.9E-08 2.7E-12 75.5 10.2 78 440-517 15-97 (103)
463 1wwb_X Protein (brain derived 98.7 2.1E-08 7.3E-13 78.8 6.9 67 638-704 21-102 (103)
464 2erj_C Cytokine receptor commo 98.7 3.9E-07 1.3E-11 84.2 16.4 92 222-319 136-230 (247)
465 3caf_A Fibroblast growth facto 98.7 1.9E-08 6.4E-13 78.9 6.6 83 434-516 16-99 (100)
466 3tv3_L PGT128 light chain, IG 98.7 8.8E-08 3E-12 87.4 12.1 116 570-694 68-205 (211)
467 2yr3_A Myosin light chain kina 98.7 5.2E-08 1.8E-12 76.1 9.1 88 425-516 11-98 (99)
468 2h41_A Fibronectin; beta sandw 98.7 3.7E-08 1.2E-12 74.6 7.7 78 328-409 9-86 (95)
469 2edj_A Roundabout homolog 2; K 98.7 6.8E-08 2.3E-12 75.7 9.5 89 425-517 8-97 (100)
470 4frw_A Poliovirus receptor-rel 98.7 1.1E-07 3.6E-12 87.3 12.4 131 381-516 78-209 (218)
471 2fbo_J V1V2;, variable region- 98.7 4.2E-08 1.4E-12 92.3 9.7 127 381-507 89-238 (250)
472 2eny_A Obscurin; beta-sandwich 98.7 6.4E-08 2.2E-12 76.1 9.1 73 431-503 13-86 (104)
473 1nbq_A JAM, junctional adhesio 98.7 1.8E-08 6E-13 91.9 6.6 123 382-509 68-198 (209)
474 2edn_A Myosin-binding protein 98.7 9.2E-08 3.2E-12 75.8 9.7 87 431-517 17-115 (118)
475 1ugn_A LIR1, leukocyte immunog 98.7 2E-07 6.9E-12 83.9 13.5 124 379-506 55-181 (198)
476 2dlt_A Myosin binding protein 98.7 4.1E-08 1.4E-12 77.8 7.8 72 432-504 14-85 (106)
477 1hnf_A CD2; T lymphocyte adhes 98.7 1.2E-07 4.1E-12 83.3 11.5 108 570-698 66-179 (182)
478 3r4d_A CEA-related cell adhesi 98.7 4.6E-08 1.6E-12 89.0 9.1 121 381-509 70-190 (208)
479 2ghw_B Anti-SARS SCFV antibody 98.7 7.1E-07 2.4E-11 83.6 17.4 42 663-705 204-246 (247)
480 2vr9_A Roundabout 1, ROBO; imm 98.7 1.2E-07 4E-12 87.0 11.7 122 385-514 72-202 (217)
481 2xzc_L FAB A.17 light chain; i 98.7 4.4E-07 1.5E-11 83.0 15.5 115 570-693 72-208 (216)
482 2edf_A Obscurin; beta-sandwich 98.7 7.6E-08 2.6E-12 75.8 8.9 71 432-503 14-84 (103)
483 1mq8_A ICAM-1, intercellular a 98.7 3.6E-07 1.2E-11 86.5 15.0 247 435-704 8-286 (291)
484 2e6p_A Obscurin-like protein 1 98.7 1.2E-07 4.1E-12 74.8 9.9 70 436-506 20-89 (104)
485 2e6q_A Obscurin-like protein 1 98.7 2.7E-07 9.1E-12 72.7 11.7 82 431-517 13-104 (112)
486 1mju_H Immunoglobulin MS6-12; 98.7 2.3E-07 7.8E-12 85.5 13.3 129 570-708 79-225 (227)
487 1uct_A Immunoglobulin alpha FC 98.7 2.8E-07 9.6E-12 84.1 13.7 116 383-505 65-180 (218)
488 3kvq_A Vascular endothelial gr 98.7 1.1E-07 3.8E-12 75.7 9.7 90 425-517 10-99 (108)
489 2if7_A SLAM family member 6; N 98.7 5.4E-07 1.8E-11 80.6 15.2 151 434-596 6-182 (193)
490 3k0w_A Mucosa-associated lymph 98.7 5.3E-07 1.8E-11 82.6 15.5 129 379-517 62-201 (218)
491 2eo9_A Roundabout homolog 1; b 98.7 1.3E-07 4.6E-12 76.6 10.2 89 425-517 8-97 (118)
492 2dav_A SLOW MYBP-C, myosin-bin 98.7 6.3E-08 2.1E-12 77.8 7.8 85 433-517 14-110 (126)
493 2dm3_A KIAA0992 protein, palla 98.6 4.9E-08 1.7E-12 78.1 7.3 92 425-517 9-101 (110)
494 2dle_A Receptor-type tyrosine- 98.6 1.4E-07 4.9E-12 73.3 9.4 77 323-405 6-82 (104)
495 2b5i_C Cytokine receptor commo 98.6 1.4E-06 4.7E-11 78.0 16.7 90 222-317 98-190 (199)
496 3ojm_B Fibroblast growth facto 98.6 1.4E-07 4.7E-12 87.5 10.5 136 380-517 74-220 (231)
497 3mpc_A FN3-like protein; fibro 98.6 1.9E-07 6.5E-12 72.4 9.3 86 323-414 3-89 (103)
498 1gl4_B Basement membrane-speci 98.6 2.2E-07 7.6E-12 72.3 9.9 87 425-516 9-96 (98)
499 2v9r_A Roundabout homolog 1; p 98.6 1.6E-07 5.5E-12 85.7 10.5 126 384-517 74-201 (212)
500 1ccz_A Protein (CD58); LFA-3, 98.6 2.5E-07 8.7E-12 80.6 11.0 147 435-599 4-164 (171)
No 1
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=100.00 E-value=2.1e-34 Score=312.87 Aligned_cols=445 Identities=16% Similarity=0.167 Sum_probs=282.9
Q ss_pred CCCC-CCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCC--------CcEEEecccCCCeEEecCCCCCcEEEE
Q psy7040 55 LDPE-GPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPET--------GVWIPVGKTREPEMDVTGLTPGHEYKF 125 (716)
Q Consensus 55 ~~p~-~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~--------~~~~~~~~~~~~~~~i~~L~~~~~y~~ 125 (716)
+.|| .+|.+.+++.+++.|+|++|..+++.++. |.|+|+...+ ..|..+.....+.++|.+|.|++.|.|
T Consensus 160 P~~P~~~l~v~~~~~~sv~l~W~pp~~~~~~~i~-Y~V~~r~~~g~~~~~~~~~~w~~v~~~~~~~~~i~~L~P~t~Y~f 238 (680)
T 1zlg_A 160 PLKPRKELRFTELQSGQLEVKWSSKFNISIEPVI-YVVQRRWNYGIHPSEDDATHWQTVAQTTDERVQLTDIRPSRWYQF 238 (680)
T ss_pred cccccccceEEeccCceEEEEEeCCCCCCCCCEE-EEEEEEECCCCCcCccccCceEEEEecCCCeEEeCCCCCCCEEEE
Confidence 3344 78999999999999999998655566777 9999987633 578877666668899999999999999
Q ss_pred EEEEEecCccCCCccccc-eEEecCCCCcccccccccceecccCCCCCCceEEEEecCCccEEEEeccccCcceEEEEEE
Q psy7040 126 RVKALNKEGESEPLETFS-SIIARDPYSKYTSVSSLDSHKRSNQPCGSGMVRKVQHLDYNTKLGVRMAQRADAGFYTVTA 204 (716)
Q Consensus 126 ~v~a~~~~g~~~~s~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~p~G~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a 204 (716)
+|+|.|..|.+.++.... ..+...
T Consensus 239 rV~A~n~~G~~~~ss~s~~~~t~~~------------------------------------------------------- 263 (680)
T 1zlg_A 239 RVAAVNVHGTRGFTAPSKHFRSSKD------------------------------------------------------- 263 (680)
T ss_pred EEEEEeCCCCCCCCCCccceEcCCC-------------------------------------------------------
Confidence 999999998433332222 111110
Q ss_pred EeCCCCceeEEEEEEecCCCCCCCCeEEeEE--eCC---eEEEEEECCCCCCCCccceEEEEEEeC-------CCCCeEE
Q psy7040 205 ENINGKDSVEVEVIVLDKPSPPGGPLKVSNV--HAE---GVTLDWKVPDDDGGQPIEKYVVDKMDE-------ATGRWTP 272 (716)
Q Consensus 205 ~n~~g~~~~~~~~~v~~~p~~p~~~~~~~~~--~~~---~~~l~W~~p~~~~~~~~~~y~v~~~~~-------~~~~~~~ 272 (716)
..+|.+|.+ +.+... ..+ ++.|+|++|...+ .++.+|.|++... ....|..
T Consensus 264 ---------------~~pp~~P~~-l~~~~~~~~~~g~~sv~l~W~pP~~~~-g~i~~Y~V~~~~~~~~~~~~~~~~~~~ 326 (680)
T 1zlg_A 264 ---------------PSAPPAPAN-LRLANSTVNSDGSVTVTIVWDLPEEPD-IPVHHYKVFWSWMVSSKSLVPTKKKRR 326 (680)
T ss_pred ---------------CCCCCCCCc-eEeeeeeecCCCceEEEEEecCCCCCC-CceeEEEEEEEecccccccCCccceEE
Confidence 036777877 788777 677 9999999877544 4799999999822 1224544
Q ss_pred ccccCcccceEEEcCCCCCCeEEEEEEEEcCCCCCCCCcccceEEecCCCCCCCCCCCcEEEeeeCCeEEE---------
Q psy7040 273 AGETEGPVTGLEVEGLIPNHKYKFRVRAVNKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDFDTDFVEL--------- 343 (716)
Q Consensus 273 ~~~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l--------- 343 (716)
... ......+.|.+|.|++.|.|+|.|.|..|.+..+.....+.+.+...+|. |.++.+...+.+++.|
T Consensus 327 ~~v-~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~v~~~T~~~~P~-p~~l~~~~~s~tsi~lp~~~~~~~~ 404 (680)
T 1zlg_A 327 KTT-DGFQNSVILEKLQPDCDYVVELQAITYWGQTRLKSAKVSLHFTSTHATNN-KEQLVKTRKGGIQTQLPFQRRRPTR 404 (680)
T ss_pred EEE-cCCeeEEEeCCCCCCCEEEEEEEEEECCCcCCCCCCceeEEEECCCCCCC-ccccccccccCccccccccccCCCc
Confidence 322 24568999999999999999999999999987777644455555556676 7888888888888877
Q ss_pred --EecCCCCCCCccceEEEEEEeecCCCc-------e------------EEEeeecCCCCeEEecCCCCCCeEEEEEEEE
Q psy7040 344 --AWTPPEQNGGSPIVGYIIEKKEKYSPI-------W------------EKCAQTEGDTPKGKVLDLIEGNQYEFRVLAV 402 (716)
Q Consensus 344 --~W~~p~~~~~~~i~~y~v~~~~~~~~~-------~------------~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~ 402 (716)
+|.+|...+ .+.+|+|.|...+... | ...........++.|.+|.+++.|.|+|+|.
T Consensus 405 ~l~W~~P~~~~--~~~~y~v~w~~~~~~~v~~Y~V~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~ 482 (680)
T 1zlg_A 405 PLEVGAPFYQD--GQLQVKVYWKKTEDPTVNRYHVRWFPEACAHNRTTGSEASSGMTHENYIILQDLSFSCKYKVTVQPI 482 (680)
T ss_pred cccccCCcccC--CcceEEEEEeCCCCCccceEEEEEeeeecccCCCCcceeeeeeccCceEEecCCCCCCeEEEEEEEe
Confidence 999986433 3568999887655321 1 1111223456789999999999999999999
Q ss_pred eCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeE
Q psy7040 403 NKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKST 482 (716)
Q Consensus 403 n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~ 482 (716)
|..|.+..... .+.+ ......|.. ....+.|.....|... ......... ..
T Consensus 483 n~~G~s~~~~~-~f~T-~~~~~~~~~-------------~~~~v~~~~~~~P~~~-------~v~~~P~~l-------~~ 533 (680)
T 1zlg_A 483 RPKSHSKAEAV-FFTT-PPCSALKGK-------------SHKPIGCLGEAGHVLS-------KVLAKPENL-------SA 533 (680)
T ss_pred cCCCCCCcccc-ceeC-CCccccccC-------------CccccccCCCCccccc-------cccCCcccc-------ce
Confidence 99997642111 0111 000000000 0000111000000000 000000000 00
Q ss_pred EEEECCCCCCCceeEEEEEEcCCCceeeEEEEEEEEEEEEEeCCCCCCCCceeeEEEEEEecCCCcee--eeEEEcccee
Q psy7040 483 KLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVLGCSLKWNPPEDDGGAPIEYYMVEKMETDTGKVL--IKWIRTNDKR 560 (716)
Q Consensus 483 ~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v~~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~--~~w~~~~~~~ 560 (716)
.+.+..+. . ++.|+|++|....++.|.+|.|+|.....+... ........
T Consensus 534 ~v~v~~~~-------------------------~-ti~lsW~pP~~~~ng~I~gY~V~y~~~~~~~~~~~~~~~~~~~-- 585 (680)
T 1zlg_A 534 SFIVQDVN-------------------------I-TGHFSWKMAKANLYQPMTGFQVTWAEVTTESRQNSLPNSIISQ-- 585 (680)
T ss_pred eEEEeccC-------------------------c-eEEEEecCCCCCCCCCceeEEEEEEEccCCCccccccceeeec--
Confidence 01111000 0 689999998754455799999999876431100 00000000
Q ss_pred eeeccccceeEEEEcCCCCCCeEEEEEEEEcCCCCCccceeeec---cCCCCCCccceeeccceeEEEEE---------E
Q psy7040 561 VTIDNVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVV---TDKPSAPEGPIQWLLTLTDVTWE---------I 628 (716)
Q Consensus 561 ~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~~~~v---~~~p~~~~~~~~~~~~~v~l~w~---------i 628 (716)
..........+.|.+|++++.|.|+|+|.|..|.|+. ....+ ..+|..|. ...+.... .|+|. |
T Consensus 586 -~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~G~~-~~~~~~T~~~~P~~P~-~l~v~~~~-~l~W~pP~~~~G~~I 661 (680)
T 1zlg_A 586 -SQILPSDHYVLTVPNLRPSTLYRLEVQVLTPGGEGPA-TIKTFRTPELPPSSAH-RSHLKHRH-PHHYKPSPERYGKPI 661 (680)
T ss_pred -ccccCCcccEEEecCCCCCceEEEEEEEEcCCCcCCC-cceEEECCCCCCCCCC-CCeEEecc-ceeECCCCCCCCCcc
Confidence 0001112488999999999999999999999999988 44443 23344444 22333333 89998 7
Q ss_pred eeEEEEeee
Q psy7040 629 SNYLQELHS 637 (716)
Q Consensus 629 ~~y~v~~~~ 637 (716)
.+|.++|+-
T Consensus 662 ~~~~~~~~~ 670 (680)
T 1zlg_A 662 PNPLLGLDS 670 (680)
T ss_pred ceeeEEEee
Confidence 888887653
No 2
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=100.00 E-value=7.5e-34 Score=313.75 Aligned_cols=501 Identities=15% Similarity=0.140 Sum_probs=272.1
Q ss_pred eEEecCCCCC-cEEEEEEEEEecCccCCCccccceEE--ecCCC-----Cc--ccccccccceecccCCCCC--------
Q psy7040 111 EMDVTGLTPG-HEYKFRVKALNKEGESEPLETFSSII--ARDPY-----SK--YTSVSSLDSHKRSNQPCGS-------- 172 (716)
Q Consensus 111 ~~~i~~L~~~-~~y~~~v~a~~~~g~~~~s~~~~~~~--~~~p~-----~~--~~~~~~~~~~~~~~~p~G~-------- 172 (716)
.+.|..+..+ ..+.|+|.+.+..|............ ..+|. .. .......+.|.+.+.|.-.
T Consensus 124 ~~~i~~~~~~~~~l~~~~va~~~~G~~~~~~v~~~~~~~~~~p~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~ 203 (731)
T 2v5y_A 124 ELAISTFWPNFYQVIFEVITSGHQGYLAIDEVKVLGHPCTRTPHFLRIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGI 203 (731)
T ss_dssp EEEECCCTTSCEEEEEEEEECSSCCEEEECCBEEESSCCSSSCEECCCCCEEEETTSCEEEEEEEESCCCTTCEEEEEES
T ss_pred EEEEeecCCCceEEEEEEEecCCceEEEEeeEEeeecccccccccccccceEEeCCCcEEEEEEeCCCCCCceeEEEecC
Confidence 4666666333 35889998888777433221111000 01111 11 1122234668888777621
Q ss_pred -CceEE------EEecCCccEEEEeccccCcceEEEEEEEeCCCC-ceeEEEEEEecCCCCCCCCeEEeEEeCCeEEEEE
Q psy7040 173 -GMVRK------VQHLDYNTKLGVRMAQRADAGFYTVTAENINGK-DSVEVEVIVLDKPSPPGGPLKVSNVHAEGVTLDW 244 (716)
Q Consensus 173 -~~~~~------~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~-~~~~~~~~v~~~p~~p~~~~~~~~~~~~~~~l~W 244 (716)
+..+. +........|.|.++.+.|.|.|+|.|.|..|. .+..+.+.+..+|.+|.. ..+.....+++.|.|
T Consensus 204 ~g~~l~~~~~~~~~~~~~~~~l~I~~~~~~d~g~Y~c~A~n~~G~~~s~~~~l~V~~~P~~~~~-p~~~~~~~~~v~l~w 282 (731)
T 2v5y_A 204 DVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVVKEPPVPIAP-PQLASVGATYLWIQL 282 (731)
T ss_dssp SSCCEEEEEEEECCSSEEEEEEEECSCCTTTCEEEEEEEEETTEEEECCCEEEEEECCCCBSSC-CEEEEECSSCEEEEC
T ss_pred CCccccccceEEeccccceEEEEEcccccccCeEEEEEEECCCCCcceeeEEEEEecCCCCCCC-cceeccCCceEEEEe
Confidence 11111 111123479999999999999999999999998 777889999999998887 466777889999999
Q ss_pred ECCCCCCCCccceEEEEEEeCCCCCeEEccccCcccceEEEcCCCCCCeEEEEEEEE--cCCCCCCCCcccceEEecCCC
Q psy7040 245 KVPDDDGGQPIEKYVVDKMDEATGRWTPAGETEGPVTGLEVEGLIPNHKYKFRVRAV--NKQGKSEPLTTTASIEAKNPF 322 (716)
Q Consensus 245 ~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~--n~~g~~~~~~~~~~~~~~~~~ 322 (716)
.++..+++.++..|.|+++.. ...|..... .....+.|.+|.+++.|.|+|.|. |..|.+.++...... ....
T Consensus 283 ~~~~~~g~~~i~~Y~v~~~~~-~~~~~~~~~--~~~~~~~i~~L~p~t~Y~~~V~A~~~N~~G~s~~S~~~~~~--t~~~ 357 (731)
T 2v5y_A 283 NANSINGDGPIVAREVEYCTA-SGSWNDRQP--VDSTSYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTR--TKCA 357 (731)
T ss_dssp CCSSBSSCSCCCEEEEEEEES-SSSCEEEEE--CCSSEEEECSCCTTCEEEEEEEEECSSTTCSCCBCCCEEEE--CCCC
T ss_pred CCcccCCCCccEEEEEEEEEC-CCCceEEec--cCcceEEEeCCCCCCEEEEEEEEEecCCCccccCCCcEEee--ecCC
Confidence 987665667899999999875 456765544 345899999999999999999999 999998777654222 2223
Q ss_pred CCCCCCCCcEEEeeeCCeEEEEecCCCCCC-CccceEEEEEEeecCCCceEE----EeeecCCCCeEEecCCCCCCeEEE
Q psy7040 323 NQPGKPGTPEIKDFDTDFVELAWTPPEQNG-GSPIVGYIIEKKEKYSPIWEK----CAQTEGDTPKGKVLDLIEGNQYEF 397 (716)
Q Consensus 323 ~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~-~~~i~~y~v~~~~~~~~~~~~----~~~~~~~~~~~~i~~l~~~~~Y~~ 397 (716)
.+|.+|.++.+...+.+++.|+|.+|.... .+.+.+|.|+|+......+.. ..........+.|.+|.|++.|.|
T Consensus 358 ~p~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~~~~~~y~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~ 437 (731)
T 2v5y_A 358 DPMRGPRKLEVVEVKSRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREEVSWDTENSHPQHTITNLSPYTNVSV 437 (731)
T ss_dssp CCSCCCEEEEEEEECSSCEEEEEECCCHHHHCSSSCEEEEEEEEESSSSEEEEEEEECCSSCSSCEEEECSCCSSCEEEE
T ss_pred CCCCCCceeEEEeccCCeEEEEEECCCcccccceeeeEEEEEEEccCCCCccceeEEEEecCCcceEEECCCCCCCEEEE
Confidence 445789999999999999999999975432 346789999998765333322 123456778999999999999999
Q ss_pred EEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEe
Q psy7040 398 RVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVN 477 (716)
Q Consensus 398 ~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~ 477 (716)
+|+|.|..|.+. +......+....+.+|.. .. ..
T Consensus 438 ~V~A~n~~G~s~-S~~~~~~T~~~~P~~p~~---------------------------~~---------------~~--- 471 (731)
T 2v5y_A 438 KLILMNPEGRKE-SQELIVQTDEDLPGAVPT---------------------------ES---------------IQ--- 471 (731)
T ss_dssp EEEEECSSCEEE-CCCEEEECCCCCCCCCCT---------------------------TT---------------CE---
T ss_pred EEEEEcCCCCCC-CceEEEEccCCCCCCCCc---------------------------ce---------------EE---
Confidence 999999999874 433222222222211110 00 00
Q ss_pred CCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEEEEEEEEEEEEEeCCCCCCCCceeeEEEEEEecCCCceeeeEEEcc
Q psy7040 478 DDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVLGCSLKWNPPEDDGGAPIEYYMVEKMETDTGKVLIKWIRTN 557 (716)
Q Consensus 478 ~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v~~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~ 557 (716)
+.. +.. ++.|+|++|...+| .+.+|.|++....... .|....
T Consensus 472 ---------------------~~~-~~~------------si~l~W~~P~~~~g-~i~~Y~V~~~~~~~~~---~~~~~~ 513 (731)
T 2v5y_A 472 ---------------------GST-FEE------------KIFLQWREPTQTYG-VITLYEITYKAVSSFD---PEIDLS 513 (731)
T ss_dssp ---------------------EEE-ETT------------EEEEECCCCSCCSS-CCCEEEEEEEEEEECC------CCC
T ss_pred ---------------------eee-cCC------------eEEEEEcCCCCCCC-CccceEEEEEECcCCC---cccccc
Confidence 000 000 89999999876655 5999999998765310 111000
Q ss_pred ceeeeeccccceeEEEEcCCCCCCeEEEEEEEEcCCCCCccceeee--ccCCCCCCcc----ceeeccceeEEEEE----
Q psy7040 558 DKRVTIDNVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVV--VTDKPSAPEG----PIQWLLTLTDVTWE---- 627 (716)
Q Consensus 558 ~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~~~~--v~~~p~~~~~----~~~~~~~~v~l~w~---- 627 (716)
..............+.|.+|++++.|.|+|+|.|..|.|+.+.... ...+|..|.. ....+.+++.|.|.
T Consensus 514 ~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~~~~T~~~~P~~p~~~~~~~~~~~~~si~l~W~pp~~ 593 (731)
T 2v5y_A 514 NQSGRVSKLGNETHFLFFGLYPGTTYSFTIRASTAKGFGPPATNQFTTKISAPSMPAYELETPLNQTDNTVTVMLKPAHS 593 (731)
T ss_dssp CCEEEEEEETTCCEEEECSCCTTEEEEEEEEEEETTEEEEEEEEEEECCCCCCCC-------------------------
T ss_pred CcceEEeecCCcceEEecCCCCCCEEEEEEEEEeCCccCCCcccEEEcCCCCCCCCCcccccccccCCceEEEEEeCCCC
Confidence 0000001111237899999999999999999999999998885322 1334444321 23456789999998
Q ss_pred ----EeeEEEEeeeeccCcee-----------eEEEEeCCe---------E-----------eeecccceeeEEEEccCC
Q psy7040 628 ----ISNYLQELHSSLMPISL-----------ESQYLMNDK---------R-----------VTIDNVDYFTKITIRPLQ 672 (716)
Q Consensus 628 ----i~~y~v~~~~~~~~~~~-----------~~~W~~~~~---------~-----------~~~~~~~~~~~~~i~~l~ 672 (716)
|.+|.|.++...+.-.. .+.|..... + +..........+....|.
T Consensus 594 ~~g~I~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aa~~~p~~~~~~~~~~vg~~~~~~~~~n~~L~ 673 (731)
T 2v5y_A 594 RGAPVSVYQIVVEEERPRRTKKTTEILKCYPVPIHFQNASLLNSQYYFAAEFPADSLQAAQPFTIGDNKTYNGYWNTPLL 673 (731)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCceEEEEEEEEecCCCCCccccccccCcccccCHHHHhhcCCcceEEEEcChhhCcccCCEEECCCCeECCEECCCCC
Confidence 88999988775443110 112221110 0 000000011234556699
Q ss_pred CCCcEEEEEEEEcCCCCceeeEEEEEecC
Q psy7040 673 RSDTAQYTVTATNSQGKDQVFIEVVVTDK 701 (716)
Q Consensus 673 ~~~~y~y~~~a~n~~G~~~~s~~l~v~~~ 701 (716)
++..|.++++|.+.+|.+..+..+.|.+.
T Consensus 674 p~~~Y~i~v~A~s~~g~~~~~~~v~~~t~ 702 (731)
T 2v5y_A 674 PYKSYRIYFQAASRANGETKIDCVQVATK 702 (731)
T ss_dssp -----------------------------
T ss_pred CCCceEEEEEEEEecCCCcEeeeEEEecc
Confidence 99999999999999999988887888877
No 3
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}
Probab=100.00 E-value=5.5e-35 Score=316.01 Aligned_cols=455 Identities=15% Similarity=0.148 Sum_probs=308.6
Q ss_pred CCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCCcEEEeccc--CCCeEEec-CCCCCcEEEEEEEEEecC
Q psy7040 57 PEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETGVWIPVGKT--REPEMDVT-GLTPGHEYKFRVKALNKE 133 (716)
Q Consensus 57 p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~--~~~~~~i~-~L~~~~~y~~~v~a~~~~ 133 (716)
+|.+|........++.++|+++... .++..|.|+++..+ ..+..+... ...++.+. +|.+++.|.|+|.|.|..
T Consensus 105 ~P~nl~c~~~~~~~~~~~W~~~~~~--~~~~~y~l~~~~~~-~~~~~c~~~~~~~~~c~~~~~l~~~~~Y~~~v~a~n~~ 181 (589)
T 3l5h_A 105 KPKNLSCIVNEGKKMRCEWDGGRET--HLETNFTLKSEWAT-HKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENAL 181 (589)
T ss_dssp CCEEEEEEEETTSCEEEEEECCSCC--SSCEEEEECCBCSS-SBCCCEECBTTBSSCCBCCSCCCSSSCEEECEEEEESS
T ss_pred CCEeeEEEECCCceEEEEECCCCcC--CcCceEEEEEEEcC-CCcccCCCCCCCcEEEEECCCCchheeEEEEEEEEeCC
Confidence 3344666677888999999987632 45889999886544 233333322 23567777 799999999999999999
Q ss_pred ccCCCccccceEEecCCCCcccccccccceecccCCCCCCceEEEEecCCccEEEEeccccCcceEEEEEEEeCCCCcee
Q psy7040 134 GESEPLETFSSIIARDPYSKYTSVSSLDSHKRSNQPCGSGMVRKVQHLDYNTKLGVRMAQRADAGFYTVTAENINGKDSV 213 (716)
Q Consensus 134 g~~~~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~G~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~ 213 (716)
|.+.+.... +...
T Consensus 182 G~~~s~~~~--~~~~----------------------------------------------------------------- 194 (589)
T 3l5h_A 182 GKVTSDHIN--FDPV----------------------------------------------------------------- 194 (589)
T ss_dssp CCBCCCCEE--ECGG-----------------------------------------------------------------
T ss_pred CCcccccEE--Eccc-----------------------------------------------------------------
Confidence 875432111 0000
Q ss_pred EEEEEEecCCCCCCCCeEE--eEEeCCeEEEEEECCCCCCCCccceEEEEEEeCCCCCeEEcccc--CcccceEEEcCCC
Q psy7040 214 EVEVIVLDKPSPPGGPLKV--SNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEATGRWTPAGET--EGPVTGLEVEGLI 289 (716)
Q Consensus 214 ~~~~~v~~~p~~p~~~~~~--~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~--~~~~~~~~i~~L~ 289 (716)
...+|.+|.+ +.+ .....+++.|+|.+|...++ ++..|.|+++..+...|...... ......+.+.+|.
T Consensus 195 -----~~~~p~pP~~-~~~~~~~~~~~~v~l~W~~p~~~~~-~~~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~~~i~~L~ 267 (589)
T 3l5h_A 195 -----YKVKPNPPHN-LSVINSEELSSILKLTWTNPSIKSV-IILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLK 267 (589)
T ss_dssp -----GSEECCCCCS-CEEECTTTCTTCEEEECCCCGGGGT-SCEEEEEEEEETTCSCCBCCCTTSSCSCCSEEEECSCC
T ss_pred -----cEEEcCCCce-EEEEecCCCCCeEEEEeCCCCCCCe-eeEEEEEEECCCCCCCcEEEccccCcCceeEEEECCCC
Confidence 0125778887 677 34678899999998776444 68899999998887788765332 3456899999999
Q ss_pred CCCeEEEEEEEEcCCCCCCCCcccceEEecCCCCCCC-CCCCcEEE----eeeCCeEEEEecCC-CCCCCccceEEEEEE
Q psy7040 290 PNHKYKFRVRAVNKQGKSEPLTTTASIEAKNPFNQPG-KPGTPEIK----DFDTDFVELAWTPP-EQNGGSPIVGYIIEK 363 (716)
Q Consensus 290 p~~~y~~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~----~~~~~~i~l~W~~p-~~~~~~~i~~y~v~~ 363 (716)
|++.|.|+|+|.|..|.+.++..+..+...+....|. +|..+... ..+.+++.|.|.++ ..+.++.+.+|+|++
T Consensus 268 p~t~Y~~~V~a~~~~g~g~~S~~S~~~~~~T~~~~P~~~p~~~~~v~~~~~~~~~~v~l~W~p~~~~~~~g~i~~Y~v~~ 347 (589)
T 3l5h_A 268 PFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRPSKAPSFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTL 347 (589)
T ss_dssp SSCCEEEEEEEEESSSCSCCCCCCCCBCCCCCCCCCCSCCCEEEECCSCSSTTSCCEEEEECCCCTTTSSSCCCEEEEEE
T ss_pred CCCEEEEEEEEEeCCCCCccCCCCCccccccCccCCCCCCcEEEEeecCcCCCcceEEEEEeeCCchhccCceeeEEEEE
Confidence 9999999999999999887776665565666666674 55544433 34668999999973 444556899999999
Q ss_pred eecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCe
Q psy7040 364 KEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSN 443 (716)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~ 443 (716)
+..+. .+.. .......+++ |.+++.|.|+|+|.|..|.+.++...........+.+|.
T Consensus 348 ~~~~~-~~~~---~~~~~~~~~~--l~~~~~Y~~~V~A~n~~G~~~~s~~~~~~~~~~~~~p~~---------------- 405 (589)
T 3l5h_A 348 TRWKS-HLQN---YTVNATKLTV--NLTNDRYLATLTVRNLVGKSDAAVLTIPACDFQATHPVM---------------- 405 (589)
T ss_dssp CCTTS-CCCB---CCCSSSCCEE--CCCSSCCCEEEEEEBTTBCCCCCCCCCCCTTCCCCSCCC----------------
T ss_pred ecCCC-Ccee---eccCCceEEE--EeCCCCEEEEEEEEeCCccCCCeEEEeecccccCCCCcc----------------
Confidence 76553 2322 2233444554 889999999999999999998775432110000000110
Q ss_pred EEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEEEEEEEEEEEEE
Q psy7040 444 FEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVLGCSLKW 523 (716)
Q Consensus 444 ~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v~~v~l~W 523 (716)
.+. ....+ . ++.|+|
T Consensus 406 -------------~l~------------------------~~~~~---~-------------------------si~l~W 420 (589)
T 3l5h_A 406 -------------DLK------------------------AFPKD---N-------------------------MLWVEW 420 (589)
T ss_dssp -------------SCE------------------------EEECS---S-------------------------SEEEEC
T ss_pred -------------eEE------------------------EEECC---C-------------------------eEEEEE
Confidence 000 00000 0 789999
Q ss_pred eCCCCCCCCceeeEEEEEEecCCCce-eeeEEEccceeeeeccccceeEEEEcCCCCCCeEEEEEEEEcCCCCCccceee
Q psy7040 524 NPPEDDGGAPIEYYMVEKMETDTGKV-LIKWIRTNDKRVTIDNVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEV 602 (716)
Q Consensus 524 ~~p~~~~~~~i~~y~v~~~~~~~~~~-~~~w~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~~~ 602 (716)
++|.. .+.+|.|++........ ...|....... ...+.+.+|.+++.|.|+|+|.|..|.|..+...
T Consensus 421 ~~p~~----~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~L~p~t~Y~~~V~A~~~~g~g~~~~~~ 488 (589)
T 3l5h_A 421 TTPRE----SVKKYILEWCVLSDKAPCITDWQQEDGTV--------HRTYLRGNLAESKCYLITVTPVYADGPGSPESIK 488 (589)
T ss_dssp CCCSS----CCSCBCCEEEEECSSSCCCEEECCBCSSC--------CEEECCSCCCSSSEEEEEECBEETTEECCCEEEE
T ss_pred ECCCC----CccEEEEEEEECCCCCCCccCcEEeeCCc--------ceEEehhccccCcEEEEEEEEEeCCcccCCEEEE
Confidence 99864 48899999987764211 13454433221 2667779999999999999999999988875433
Q ss_pred e-----ccCCCCCCccceeeccceeEEEEE----------EeeEEEEeeeeccCceeeEEEEeCCeEeeecccceeeEEE
Q psy7040 603 V-----VTDKPSAPEGPIQWLLTLTDVTWE----------ISNYLQELHSSLMPISLESQYLMNDKRVTIDNVDYFTKIT 667 (716)
Q Consensus 603 ~-----v~~~p~~~~~~~~~~~~~v~l~w~----------i~~y~v~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~ 667 (716)
. +|.+|..+. +..++.+++.|+|. +.+|.|.|+... .-.| ..........+.
T Consensus 489 ~~t~~~~P~~pp~l~-~~~~~~~sv~l~W~~~~~~~~~g~i~~Y~v~~~~~~-----~~~~-------~~~~~~~~~~~~ 555 (589)
T 3l5h_A 489 AYLKQAPPSKGPTVR-TKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTII-----GNET-------AVNVDSSHTEYT 555 (589)
T ss_dssp EESSCCCCSSCCCCC-EECCCSSCBEEBCCCCCHHHHCSCEEEEEECCBCSS-----CCCC-------CEEECTTCCBCC
T ss_pred EEeccCCCCCCCeEE-EeecccceEEEEecCCCHHHcCccceeEEEEEEeCC-----CCeE-------EEEeCCcccEEE
Confidence 2 132222333 55677899999998 679999776521 0011 011122346889
Q ss_pred EccCCCCCcEEEEEEEEcCCCCceeeEEEEEecC
Q psy7040 668 IRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTDK 701 (716)
Q Consensus 668 i~~l~~~~~y~y~~~a~n~~G~~~~s~~l~v~~~ 701 (716)
|.+|.+++.|.|++.|.|..| +..+..+.+.++
T Consensus 556 ~~~L~p~t~Y~~~V~A~n~~G-~~~S~~~~~~T~ 588 (589)
T 3l5h_A 556 LSSLTSDTLYMVRMAAYTDEG-GKDGPEFTFTTP 588 (589)
T ss_dssp BCSCCSSCCEECCEEEEETTE-EEECCCCEECCC
T ss_pred ecCCCCCCEEEEEEEEEeCCC-CCCCCCeEEecC
Confidence 999999999999999999999 777777777653
No 4
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=4.9e-32 Score=290.43 Aligned_cols=485 Identities=15% Similarity=0.181 Sum_probs=315.6
Q ss_pred CceEEEEecCCccEEEEeccccCcceEEEEEEEeCCCCceeEEEEEEecCCCCCC---CCeEEeEEeCCeEEEEEECCCC
Q psy7040 173 GMVRKVQHLDYNTKLGVRMAQRADAGFYTVTAENINGKDSVEVEVIVLDKPSPPG---GPLKVSNVHAEGVTLDWKVPDD 249 (716)
Q Consensus 173 ~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~~p~---~~~~~~~~~~~~~~l~W~~p~~ 249 (716)
..++.+........|.|.++...|+|.|+|.|.|..|.......+.+...+.+|. .+..+....+..+.|.|.....
T Consensus 49 ~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~ 128 (570)
T 3b43_A 49 APAYKMQFKNNVASLVINKVDHSDVGEYTCKAENSVGAVASSAVLVIKERKLPPSFARKLKDVHETLGFPVAFECRINGS 128 (570)
T ss_dssp CSSEEEECCTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEECCCCCCCEESSCCCCEEEETTSCEEEEEEEESS
T ss_pred CCCEEEEEECCEEEEEEccCChhhCEEEEEEEEeCCceEEEEEEEEECCCCCCCcccccCCCeEecCCCeEEEEEEEccC
Confidence 3456666666678999999999999999999999999988888888765443332 1123344567889999996332
Q ss_pred CCCCccceEEEEEEe--C-CCCCeEEccccCcccceEEEcCCCCCCeEEEEEEEEcCCCCCCCCcccceEEecCCCCCC-
Q psy7040 250 DGGQPIEKYVVDKMD--E-ATGRWTPAGETEGPVTGLEVEGLIPNHKYKFRVRAVNKQGKSEPLTTTASIEAKNPFNQP- 325 (716)
Q Consensus 250 ~~~~~~~~y~v~~~~--~-~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p- 325 (716)
+...+.+.... . ....... . .......+.|.++...+.+.|+|.|.|..|....+.. +.+.....+|
T Consensus 129 ----p~~~v~W~k~g~~l~~~~~~~~-~-~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~---l~v~~~~~pp~ 199 (570)
T 3b43_A 129 ----EPLQVSWYKDGELLKDDANLQT-S-FIHNVATLQILQTDQSHVGQYNCSASNPLGTASSSAK---LTLSEHEVPPF 199 (570)
T ss_dssp ----SSCEEEEEETTEECCCCSSEEE-E-EETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEE---EEEECCCCCCE
T ss_pred ----CCCEEEEEECCEECcCCCCEEE-E-EECCEEEEEECcCChHHCEEEEEEEEeCCcEEEEEEE---EEEcCCCCCCc
Confidence 22222222210 0 1111111 0 0123467999999999999999999998875422211 2222111111
Q ss_pred --CCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecC-----CCceEEEeeecCCCCeEEecCCCCCCeEEEE
Q psy7040 326 --GKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKY-----SPIWEKCAQTEGDTPKGKVLDLIEGNQYEFR 398 (716)
Q Consensus 326 --~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~-----~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~ 398 (716)
..|.++. ...+..+.|.|..... +.. .+.|...+ +.... .........+.|.++...+.+.|+
T Consensus 200 ~~~~p~~~~--v~~G~~~~l~C~~~g~----p~p--~i~W~k~g~~i~~~~~~~--~~~~~~~~~L~i~~v~~~D~G~Y~ 269 (570)
T 3b43_A 200 FDLKPVSVD--LALGESGTFKCHVTGT----API--KITWAKDNREIRPGGNYK--MTLVENTATLTVLKVTKGDAGQYT 269 (570)
T ss_dssp EEECCCCBC--CBSBSCEEEEEEEESS----SCC--EEEEEETTEECCTTSSEE--EEEETTEEEEEESSBCGGGCEEEE
T ss_pred cccCCceeE--ecCCCeEEEEEEEEEC----CCC--EEEEEECCEECcCCCcEE--EEEECCEEEEEEcccCcccCEEEE
Confidence 1122221 1234556666654211 111 22232221 01111 111223457889999999999999
Q ss_pred EEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeC
Q psy7040 399 VLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVND 478 (716)
Q Consensus 399 v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~ 478 (716)
|.|.|..|....+ .......+|.+.........+..|..+.|.|.+.+.|.+.+.|++++..+....++.+...
T Consensus 270 C~a~N~~g~~~~~------~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~~~~l~~~~~~~~~~~ 343 (570)
T 3b43_A 270 CYASNVAGKDSCS------AQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFV 343 (570)
T ss_dssp EEEEETTEEEEEE------EEECCBCCCEEEECCCSBCCEESSCEEEEEEEEESSSSCEEEEEETTEECCCSSSEEEEEE
T ss_pred EEEECCCCcEEEE------EEEEeecCCcccccCCCccEEcCCCcEEEEEEEeeCCCCEEEEeECCEECCCCCcEEEEEE
Confidence 9999988754211 1112233565544333445678999999999999999999999999999988888888777
Q ss_pred CCeEEEEECCCCCCCceeEEEEEEcCCCceeeEEEEEEEEEEEEEeCCC----CCCCCceeeEEEEEEecCCCceeeeEE
Q psy7040 479 DKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVLGCSLKWNPPE----DDGGAPIEYYMVEKMETDTGKVLIKWI 554 (716)
Q Consensus 479 ~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v~~v~l~W~~p~----~~~~~~i~~y~v~~~~~~~~~~~~~w~ 554 (716)
.....|.|.++...|.|.|+|.|.|..|....+..+.+.....--..|. ..+......|.+. +.+.+.+.|+
T Consensus 344 ~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~P~~~~~~~~~~~~~G~~v~l~C~~~----g~P~p~v~W~ 419 (570)
T 3b43_A 344 ESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPHPVETLKGADVHLECELQ----GTPPFQVSWH 419 (570)
T ss_dssp TTEEEEEEESCCGGGCEEEEEEEEBTTBCCEEEEEECEECCCEECSCCCCEEECTTCCEEEEEEEE----SSSSCCCEEE
T ss_pred CCEEEEEECCCCcccCEEEEEEEEeCCCEEEEEEEEEecCCCeeecCCCceeecCCCEEEEEEEEe----cCCCCEEEEE
Confidence 7788999999999999999999999999988888777761110001111 1122223344443 3344559999
Q ss_pred Eccceeeeec-----cccceeEEEEcCCCCCCeEEEEEEEEcCCCCCccceeeeccCCCCCCcc---ceeeccceeEEEE
Q psy7040 555 RTNDKRVTID-----NVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTDKPSAPEG---PIQWLLTLTDVTW 626 (716)
Q Consensus 555 ~~~~~~~~~~-----~~~~~~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~~~~v~~~p~~~~~---~~~~~~~~v~l~w 626 (716)
+.+....... .......+.|.++...+.+.|+|.|.|..|.......+.|..+|..... +....+..+.
T Consensus 420 k~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~v~~~P~~~~~~~~~~~~~g~~~~--- 496 (570)
T 3b43_A 420 KDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLKAPPRFVKKLSDISTVVGEEVQ--- 496 (570)
T ss_dssp ETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECCCCEEEECCCCBCCBTTCCEE---
T ss_pred ECCEECcCCCCEEEEEcCCEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEeccCCcccccCCCceecCCCeEE---
Confidence 9876543211 1122357889999999999999999999998777666667776642211 1222233444
Q ss_pred EEeeEEEEeeeeccCcee----eEEEEeCCeEeeec-------ccceeeEEEEccCCCCCcEEEEEEEEcCCCCceeeEE
Q psy7040 627 EISNYLQELHSSLMPISL----ESQYLMNDKRVTID-------NVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIE 695 (716)
Q Consensus 627 ~i~~y~v~~~~~~~~~~~----~~~W~~~~~~~~~~-------~~~~~~~~~i~~l~~~~~y~y~~~a~n~~G~~~~s~~ 695 (716)
|.|.+.| .+.|++++..+... .......|.|.++...|+|.|+|.|.|.+|..++++.
T Consensus 497 -----------l~c~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~a~ 565 (570)
T 3b43_A 497 -----------LQATIEGAEPISVAWFKDKGEIVRESDNIWISYSENIATLQFSRAEPANAGKYTCQIKNEAGTQECFAT 565 (570)
T ss_dssp -----------EEEEEESCSSCCCEEEETTEECCCCTTTEEECCCSSEEEEEESSCCTTCCEEEEEEEECSSCEEEEEEE
T ss_pred -----------EEEEEecCCCCEEEEEeCCeEeccCCCeEEEEECCCEEEEEECcCCHHHCEEEEEEEEECCcEEEEEEE
Confidence 5566665 89999998655432 1234478999999999999999999999999999999
Q ss_pred EEEec
Q psy7040 696 VVVTD 700 (716)
Q Consensus 696 l~v~~ 700 (716)
|.|.+
T Consensus 566 L~V~e 570 (570)
T 3b43_A 566 LSVLE 570 (570)
T ss_dssp ECCBC
T ss_pred EEEeC
Confidence 98753
No 5
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=100.00 E-value=4.6e-31 Score=286.63 Aligned_cols=446 Identities=14% Similarity=0.166 Sum_probs=272.0
Q ss_pred CcceEEEEEEEeCCCCceeEEEEEEecCCCCC-CCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCCC------
Q psy7040 195 ADAGFYTVTAENINGKDSVEVEVIVLDKPSPP-GGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEAT------ 267 (716)
Q Consensus 195 ~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~~p-~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~------ 267 (716)
.+.|.+.| +.|..|..-......+.+.|.+| .+ +.+.....+++.|+|++|.+.++.++. |.|+++....
T Consensus 133 ~c~g~~~C-c~n~cG~~C~~P~~~~~~~P~~P~~~-l~v~~~~~~sv~l~W~pp~~~~~~~i~-Y~V~~r~~~g~~~~~~ 209 (680)
T 1zlg_A 133 ECSGVKKC-CSNGCGHTCQVPKTLYKGVPLKPRKE-LRFTELQSGQLEVKWSSKFNISIEPVI-YVVQRRWNYGIHPSED 209 (680)
T ss_pred cCCCcccc-ccccccccccccceeeeccccccccc-ceEEeccCceEEEEEeCCCCCCCCCEE-EEEEEEECCCCCcCcc
Confidence 45566666 56677764332233357788888 66 899999999999999987655566677 9999987532
Q ss_pred --CCeEEccccCcccceEEEcCCCCCCeEEEEEEEEcCCCCCCCCcccceEEecCCCCCCCCCCCcEEEee--eCC---e
Q psy7040 268 --GRWTPAGETEGPVTGLEVEGLIPNHKYKFRVRAVNKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDF--DTD---F 340 (716)
Q Consensus 268 --~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~--~~~---~ 340 (716)
..|..+.. .....+.|.+|.|++.|.|+|.|.|..|.+..+.....+.......+|.+|.++.+... +.+ +
T Consensus 210 ~~~~w~~v~~--~~~~~~~i~~L~P~t~Y~frV~A~n~~G~~~~ss~s~~~~t~~~~~pp~~P~~l~~~~~~~~~~g~~s 287 (680)
T 1zlg_A 210 DATHWQTVAQ--TTDERVQLTDIRPSRWYQFRVAAVNVHGTRGFTAPSKHFRSSKDPSAPPAPANLRLANSTVNSDGSVT 287 (680)
T ss_pred ccCceEEEEe--cCCCeEEeCCCCCCCEEEEEEEEEeCCCCCCCCCCccceEcCCCCCCCCCCCceEeeeeeecCCCceE
Confidence 56776654 34678999999999999999999999995444444433333222357889999999887 777 9
Q ss_pred EEEEecCCCCCCCccceEEEEEEeec-C------CCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCC
Q psy7040 341 VELAWTPPEQNGGSPIVGYIIEKKEK-Y------SPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDP 413 (716)
Q Consensus 341 i~l~W~~p~~~~~~~i~~y~v~~~~~-~------~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~ 413 (716)
+.|+|.+|...+ ++|.+|+|+|+.. + ...|... .......+++|.+|.+++.|.|+|+|.|..|.|.++..
T Consensus 288 v~l~W~pP~~~~-g~i~~Y~V~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~ 365 (680)
T 1zlg_A 288 VTIVWDLPEEPD-IPVHHYKVFWSWMVSSKSLVPTKKKRRK-TTDGFQNSVILEKLQPDCDYVVELQAITYWGQTRLKSA 365 (680)
T ss_pred EEEEecCCCCCC-CceeEEEEEEEecccccccCCccceEEE-EEcCCeeEEEeCCCCCCCEEEEEEEEEECCCcCCCCCC
Confidence 999999876544 5899999999822 1 1234433 23456688999999999999999999999999988776
Q ss_pred CCceEeecCCCCCcccccccccEEEecCCeEEEEEE-EeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCC
Q psy7040 414 TAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDIN-VIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRG 492 (716)
Q Consensus 414 ~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~-v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~ 492 (716)
...+...+...+|. . .++.+.......+.+. ....+...+.|.....
T Consensus 366 ~~~v~~~T~~~~P~-p----~~l~~~~~s~tsi~lp~~~~~~~~~l~W~~P~~--------------------------- 413 (680)
T 1zlg_A 366 KVSLHFTSTHATNN-K----EQLVKTRKGGIQTQLPFQRRRPTRPLEVGAPFY--------------------------- 413 (680)
T ss_pred ceeEEEECCCCCCC-c----cccccccccCccccccccccCCCccccccCCcc---------------------------
Confidence 44344333333332 1 1111111110000000 0000111112211000
Q ss_pred CceeEEEEEEcCCCceeeEEEEEEEEEEEEEeCCCCCCCCceeeEEEEEEecCCCceeeeEEEccceeeeeccccceeEE
Q psy7040 493 DSGIYTLAVKNSWGTDKGTAKVTVLGCSLKWNPPEDDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDNVDYFTKI 572 (716)
Q Consensus 493 ~~~~y~~~a~n~~g~~~~s~~~~v~~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 572 (716)
+ .+ .....|.|..... ..+..|.|.|.+.........|.... ........+
T Consensus 414 ----------~-~~---------~~~y~v~w~~~~~---~~v~~Y~V~w~~~~~~~~~~~~~~~~------~~~~~~~~~ 464 (680)
T 1zlg_A 414 ----------Q-DG---------QLQVKVYWKKTED---PTVNRYHVRWFPEACAHNRTTGSEAS------SGMTHENYI 464 (680)
T ss_pred ----------c-CC---------cceEEEEEeCCCC---CccceEEEEEeeeecccCCCCcceee------eeeccCceE
Confidence 0 00 0034445544321 12455555554321100000111100 001123789
Q ss_pred EEcCCCCCCeEEEEEEEEcCCCCCcccee-----------------ee-----------ccCCCCCCcc---ceeeccce
Q psy7040 573 TIRPLQRSDTAQYTVTATNSQGKDQVFIE-----------------VV-----------VTDKPSAPEG---PIQWLLTL 621 (716)
Q Consensus 573 ~i~~L~~~~~y~~~v~a~n~~G~~~~s~~-----------------~~-----------v~~~p~~~~~---~~~~~~~~ 621 (716)
.|.+|.+++.|.|+|+|.|..|.+..... +. ++.+|..+.. +..++.+
T Consensus 465 ~l~~L~p~t~Y~~~V~A~n~~G~s~~~~~~f~T~~~~~~~~~~~~~v~~~~~~~P~~~~v~~~P~~l~~~v~v~~~~~t- 543 (680)
T 1zlg_A 465 ILQDLSFSCKYKVTVQPIRPKSHSKAEAVFFTTPPCSALKGKSHKPIGCLGEAGHVLSKVLAKPENLSASFIVQDVNIT- 543 (680)
T ss_pred EecCCCCCCeEEEEEEEecCCCCCCccccceeCCCccccccCCccccccCCCCccccccccCCccccceeEEEeccCce-
Confidence 99999999999999999999995542211 00 1133433210 2233444
Q ss_pred eEEEEE---------EeeEEEEeeeeccCceeeEEEEe-CCeEeeec--ccceeeEEEEccCCCCCcEEEEEEEEcCCCC
Q psy7040 622 TDVTWE---------ISNYLQELHSSLMPISLESQYLM-NDKRVTID--NVDYFTKITIRPLQRSDTAQYTVTATNSQGK 689 (716)
Q Consensus 622 v~l~w~---------i~~y~v~~~~~~~~~~~~~~W~~-~~~~~~~~--~~~~~~~~~i~~l~~~~~y~y~~~a~n~~G~ 689 (716)
+.|+|+ |.+|.|.|+...-. . .+.. ....+... .......+.|.+|.+++.|.|+|.|.|..|.
T Consensus 544 i~lsW~pP~~~~ng~I~gY~V~y~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~ 619 (680)
T 1zlg_A 544 GHFSWKMAKANLYQPMTGFQVTWAEVTTE---S-RQNSLPNSIISQSQILPSDHYVLTVPNLRPSTLYRLEVQVLTPGGE 619 (680)
T ss_pred EEEEecCCCCCCCCCceeEEEEEEEccCC---C-ccccccceeeecccccCCcccEEEecCCCCCceEEEEEEEEcCCCc
Confidence 999998 68999987653110 0 0000 00001000 1123478999999999999999999999999
Q ss_pred ceeeEEEEEecCCCCCCCCeEEEEe
Q psy7040 690 DQVFIEVVVTDKPSAPEGPIQIWMS 714 (716)
Q Consensus 690 ~~~s~~l~v~~~p~~p~~p~~~~~~ 714 (716)
+.. ..+.+.+++.+|..|..+.++
T Consensus 620 G~~-~~~~~~T~~~~P~~P~~l~v~ 643 (680)
T 1zlg_A 620 GPA-TIKTFRTPELPPSSAHRSHLK 643 (680)
T ss_pred CCC-cceEEECCCCCCCCCCCCeEE
Confidence 987 668888888888777766654
No 6
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=100.00 E-value=8.2e-30 Score=278.53 Aligned_cols=529 Identities=15% Similarity=0.080 Sum_probs=325.9
Q ss_pred CeEEecCCCCCcEEEEEEEEEecCccCCCccccceEEecC-CCCcc--------cccccccceecccCCC--------C-
Q psy7040 110 PEMDVTGLTPGHEYKFRVKALNKEGESEPLETFSSIIARD-PYSKY--------TSVSSLDSHKRSNQPC--------G- 171 (716)
Q Consensus 110 ~~~~i~~L~~~~~y~~~v~a~~~~g~~~~s~~~~~~~~~~-p~~~~--------~~~~~~~~~~~~~~p~--------G- 171 (716)
.++.|.+++..+.+.|+|++.+.............+.... ++.+. ......+.|.+.+ |. |
T Consensus 71 ~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~v~~g~~v~l~C~~~~-p~~~v~W~~~g~ 149 (642)
T 1e07_A 71 ASLLIQNIIQNDTGFYTLHVIKSDLVNEEATGQFRVYPELPKPSISSNNSKPVEDKDAVAFTCEPET-QDATYLWWVNNQ 149 (642)
T ss_pred CcEEECCCCcccCcEEEEEEEcCCCeEEEEEEEEEecccCCCCcEEccCceeEecCCcEEEEEECCC-CCeeEEEEECCe
Confidence 5899999999999999999988643221111112222111 11110 1112235688776 33 2
Q ss_pred ---CCceEEEEecCCccEEEEeccccCcceEEEEEEEeCCCCc-eeEEEEEEecCCCCCCC-CeEEeEEeCCeEEEEEEC
Q psy7040 172 ---SGMVRKVQHLDYNTKLGVRMAQRADAGFYTVTAENINGKD-SVEVEVIVLDKPSPPGG-PLKVSNVHAEGVTLDWKV 246 (716)
Q Consensus 172 ---~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~-~~~~~~~v~~~p~~p~~-~~~~~~~~~~~~~l~W~~ 246 (716)
...++.+. .....|.|.+++..|.|.|+|.|.|..|.. +..+.|.|...|..+.. +.......++.+.|.|..
T Consensus 150 ~l~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~G~~~~l~C~~ 227 (642)
T 1e07_A 150 SLPVSPRLQLS--NGNRTLTLFNVTRNDTASYKCETQNPVSARRSDSVILNVLYGPDAPTISPLNTSYRSGENLNLSCHA 227 (642)
T ss_pred ECCCCCceEEc--CCCCEEEEeCCCcccCeeEEEEEecCCCCcccceEEEEEEeCCCCcEEecCCcccccCCEEEEEEEc
Confidence 22333333 345789999999999999999999998873 56688888866654431 112234567899999996
Q ss_pred CCCCCCCccceEEEEEEeCCCCCeEEccccCcccceEEEcCCCCCCeEEEEEEEEcCCCCCCCCcccceEEecCCCCCCC
Q psy7040 247 PDDDGGQPIEKYVVDKMDEATGRWTPAGETEGPVTGLEVEGLIPNHKYKFRVRAVNKQGKSEPLTTTASIEAKNPFNQPG 326 (716)
Q Consensus 247 p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p~ 326 (716)
. +.|...+.+.. .+. .. .....+.|.++...+.+.|+|.|.|..|....+... .+.+..+...|.
T Consensus 228 ~----g~p~~~i~W~~--~g~----~i----~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~-~v~v~~~~~~p~ 292 (642)
T 1e07_A 228 A----SNPPAQYSWFV--NGT----FQ----QSTQELFIPNITVNNSGSYTCQAHNSDTGLNRTTVT-TITVYAEPPKPF 292 (642)
T ss_pred C----CCCCcEEEEEE--CCe----Ec----ccCCceEEecccccCCeEEEEEEEeCCCceEEeeeE-EEEEEccCCCCE
Confidence 2 22333333332 111 11 224679999999999999999999988765333222 122221111111
Q ss_pred -CCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCC-ceEEEeeecCCCCeEEecCCCCCCeEEEEEEEEeC
Q psy7040 327 -KPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSP-IWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNK 404 (716)
Q Consensus 327 -~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~-~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~ 404 (716)
.+.+... ......+.|.|..... + . .+.|...+.. ..............+.|.++...+.+.|+|.|.|.
T Consensus 293 i~~~~~~~-~~~g~~v~l~C~~~~~----p-~--~v~W~~~g~~l~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 364 (642)
T 1e07_A 293 ITSNNSNP-VEDEDAVALTCEPEIQ----N-T--TYLWWVNNQSLPVSPRLQLSNDNRTLTLLSVTRNDVGPYECGIQNE 364 (642)
T ss_pred EEcCCcee-EecCCcEEEEEECCCC----C-c--cEEEEECCccCCCcCCEEEeCCCCEEEEeccCcccCeeEEEEEeCC
Confidence 0111111 1234568899887322 2 1 2333322211 00011111224567999999999999999999999
Q ss_pred CCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEE
Q psy7040 405 GGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKL 484 (716)
Q Consensus 405 ~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l 484 (716)
.|..... .. ...+.. +|......+....+..|..+.|.|.+.+.|.+.+.|++++..+.. ...|
T Consensus 365 ~g~~~s~-~~-~l~V~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~~~~-----------~~~L 428 (642)
T 1e07_A 365 LSVDHSD-PV-ILNVLY---GPDDPTISPSYTYYRPGVNLSLSCHAASNPPAQYSWLIDGNIQQH-----------TQEL 428 (642)
T ss_pred CCCccee-eE-EEEEEc---CCCCCeecCCceEecCCCcEEEEEEcCccCCCeEEEEECCEEcCC-----------CceE
Confidence 8753211 11 112222 222222224456788999999999999999999999999987643 2369
Q ss_pred EECCCCCCCceeEEEEEEcCCCceeeEEEEEEE------EEEEEEeCC--CCCCCCceeeEEEEEEecCCCceeeeEEEc
Q psy7040 485 KVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVL------GCSLKWNPP--EDDGGAPIEYYMVEKMETDTGKVLIKWIRT 556 (716)
Q Consensus 485 ~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v~------~v~l~W~~p--~~~~~~~i~~y~v~~~~~~~~~~~~~w~~~ 556 (716)
.|.++...|.|.|+|.|.|..|....+..+.+. ...+.-... ...+......|.+. .+.+.+.|++.
T Consensus 429 ~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~~~p~i~~~~~~~v~~g~~v~l~C~~~-----~~~~~i~W~~~ 503 (642)
T 1e07_A 429 FISNITEKNSGLYTCQANNSASGHSRTTVKTITVSAELPKPSISSNNSKPVEDKDAVAFTCEPE-----AQNTTYLWWVN 503 (642)
T ss_pred EEccCChhhCeEEEEEEEcCCCCCcccceEEEEEeccCCCceEecCCceeecCCCeEEEEEECC-----CCCcEEEEEEC
Confidence 999999999999999999999877655433332 111110000 01112212223322 23455999988
Q ss_pred cceeeeec---cccceeEEEEcCCCCCCeEEEEEEEEcCCCCCcc-ceeeeccCCCCCCccceeeccceeEEEEEEeeEE
Q psy7040 557 NDKRVTID---NVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQV-FIEVVVTDKPSAPEGPIQWLLTLTDVTWEISNYL 632 (716)
Q Consensus 557 ~~~~~~~~---~~~~~~~~~i~~L~~~~~y~~~v~a~n~~G~~~~-s~~~~v~~~p~~~~~~~~~~~~~v~l~w~i~~y~ 632 (716)
+....... .......+.|.++...+.+.|+|.|.|..|.... ...+.|..+|..+. +. ... +.+. .|..
T Consensus 504 g~~l~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~-~~-~~~--~~v~---~g~~ 576 (642)
T 1e07_A 504 GQSLPVSPRLQLSNGNRTLTLFNVTRNDARAYVCGIQNSVSANRSDPVTLDVLYGPDTPI-IS-PPD--SSYL---SGAN 576 (642)
T ss_pred CEeCCCCCcEEEcCCCcEEEEeecChhcCceEEEEeEcCCCCccCCCEEEEEEeCCCcce-ec-CCc--eeEE---cCCc
Confidence 76543221 1122368999999999999999999999986433 34555655444332 11 111 1110 1222
Q ss_pred EEeeeeccCcee----eEEEEeCCeEeeecccceeeEEEEccCCCCCcEEEEEEEEcCCCCceeeEEEEEec
Q psy7040 633 QELHSSLMPISL----ESQYLMNDKRVTIDNVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTD 700 (716)
Q Consensus 633 v~~~~~~~~~~~----~~~W~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~y~~~a~n~~G~~~~s~~l~v~~ 700 (716)
+ .|.|.+.| .+.|+++|..+..+ ..|.|.++...|.|.|+|.|.|..|....++.|.|..
T Consensus 577 ~---~l~C~~~g~p~p~v~W~~~g~~i~~~-----~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~s~~l~V~v 640 (642)
T 1e07_A 577 L---NLSCHSASNPSPQYSWRINGIPQQHT-----QVLFIAKITPNNNGTYACFVSNLATGRNNSIVKSITV 640 (642)
T ss_pred E---EEEEEeccCCCCeEEEEECCEECccC-----ceEEECcccccCCeEEEEEEEecccCcceeEEEEEEE
Confidence 2 26676666 89999999988765 6899999999999999999999999999999888864
No 7
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=100.00 E-value=3.6e-31 Score=268.25 Aligned_cols=339 Identities=16% Similarity=0.201 Sum_probs=250.7
Q ss_pred CCCCCCceEEEEeCC-eEEEEecCCCCCCCCccceEEEEEEcCCCC---cEEEecccCCCeEEecCCCCCcEEEEEEEEE
Q psy7040 55 LDPEGPLEVSNIHKD-GCTLKWNKPKDDGGEPLEGYLVEKYDPETG---VWIPVGKTREPEMDVTGLTPGHEYKFRVKAL 130 (716)
Q Consensus 55 ~~p~~~l~~~~~~~~-s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~---~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~ 130 (716)
+.||..|.+...+.+ ++.|+|++|. +.++.+|+|+++..++. .|........+++.|.+|.|++.|.|+|+|.
T Consensus 2 p~~P~~l~~~~~~~~~sv~l~W~~~~---~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~ 78 (368)
T 1fnf_A 2 LSPPTNLHLEANPDTGVLTVSWERST---TPDITGYRITTTPTNGQQGNSLEEVVHADQSSCTFDNLSPGLEYNVSVYTV 78 (368)
T ss_dssp CCCCEEEEEEECSSSSCEEEEEECCS---CSSCCEEEEEEEETTTCSSCCEEEEECTTCCEEECCCCCTTSCEEEEEEEE
T ss_pred CCCCcceEEEecCCCcEEEEEEeCCC---CCCceEEEEEEEECCCCCCceeEEEecCCcCEEEECCCCCCCEEEEEEEEE
Confidence 456666888887776 6999999985 24599999999876543 3555444556899999999999999999999
Q ss_pred ecCccCCCccccceEEecCCCCcccccccccceecccCCC--CCCceE--------------EEEecCCccEEEEecccc
Q psy7040 131 NKEGESEPLETFSSIIARDPYSKYTSVSSLDSHKRSNQPC--GSGMVR--------------KVQHLDYNTKLGVRMAQR 194 (716)
Q Consensus 131 ~~~g~~~~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~--G~~~~~--------------~~~~~~~~~~l~i~~l~~ 194 (716)
|..|.+.++.........+|..+.........+.+.|.++ |.-..+ .+........+.|.+|.+
T Consensus 79 ~~~g~s~~~~~~~~~~~~~p~~l~~~~~~~~si~l~W~~p~~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p 158 (368)
T 1fnf_A 79 KDDKESVPISDTIIPAVPPPTDLRFTNIGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVAELSISPSDNAVVLTNLLP 158 (368)
T ss_dssp ETTEECCCEEEEECCCCCCCEEEEEESCCSSCEEEEEECCTTCCCSEEEEEEEETTCTTCCEEEEECTTCCEEEECSCCT
T ss_pred cCCCccCceeeeecCCCcCCceeEEEEcCCCeEEEEeeCCCCCCCcEEEEEEEECCCCCccEEEEcCCCcceEEecCCCC
Confidence 9999877653221111111222222222345689999987 222222 222344567899999999
Q ss_pred CcceEEEEEEEeCCCCceeEEEEEEecCCCCCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCCCC-CeEEc
Q psy7040 195 ADAGFYTVTAENINGKDSVEVEVIVLDKPSPPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEATG-RWTPA 273 (716)
Q Consensus 195 ~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~-~~~~~ 273 (716)
+..|.|++.|.|..|.... .......+|.+|.+ +.+.....+++.|+|++|. + .+.+|.|++...... .+..
T Consensus 159 ~t~Y~~~V~a~~~~g~s~~-~~~~~~~~~~~P~~-l~~~~~~~~sv~l~W~~p~---~-~i~~Y~v~~~~~~~~~~~~~- 231 (368)
T 1fnf_A 159 GTEYVVSVSSVYEQHESTP-LRGRQKTGLDSPTG-IDFSDITANSFTVHWIAPR---A-TITGYRIRHHPEHFSGRPRE- 231 (368)
T ss_dssp TCEEEEEEEEEETTEECCC-EEEEEECCCCCCEE-EEEESCCSSEEEEEEECCS---S-CCSEEEEEEECSCCSSCCEE-
T ss_pred CCEEEEEEEEEeCCCCCCC-eEeeecCCCCCCCc-cEEEEccCCEEEEEEeCCC---C-CcCEEEEEEecCCCCCCccE-
Confidence 9999999999999886433 44455667777776 7888888899999999864 2 589999999876542 2222
Q ss_pred cccCcccceEEEcCCCCCCeEEEEEEEEcCCCCCCCCcccceEEecCCCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCC
Q psy7040 274 GETEGPVTGLEVEGLIPNHKYKFRVRAVNKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGG 353 (716)
Q Consensus 274 ~~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~ 353 (716)
.........+.+.+|.+++.|.|+|.|.|..|.+..+.. ... ..|.+|.++.+...+.+++.|+|.+|..
T Consensus 232 ~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~~~~----~~~---t~p~~P~~l~~~~~~~~sv~l~W~~p~~--- 301 (368)
T 1fnf_A 232 DRVPHSRNSITLTNLTPGTEYVVSIVALNGREESPLLIG----QQS---TVSDVPRDLEVVAATPTSLLISWDAPAV--- 301 (368)
T ss_dssp EEEETTCCEEEEESCCTTCEEEEEEEEEETTEECCCEEE----EEE---CCCCSCEEEEEEEEETTEEEEEEECCSS---
T ss_pred EEeCCCcCEEEECCCCCCCEEEEEEEEEeCCccCCcccc----ccc---CCCCCCCeeEEEecCCCEEEEEeeCCCC---
Confidence 222345789999999999999999999999887655432 222 4577888999998999999999999654
Q ss_pred ccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCC
Q psy7040 354 SPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPT 414 (716)
Q Consensus 354 ~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~ 414 (716)
.+.+|.|+++..+................+.+.+|.+++.|.|+|+|.|..|.|..+...
T Consensus 302 -~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~~~~G~g~~s~~~ 361 (368)
T 1fnf_A 302 -TVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGRGDSPASSKP 361 (368)
T ss_dssp -CCSEEEEEEEETTCCSCCEEEEEETTCCEEEECSCCTTCCEEEEEEEECCCSSSCCBCCC
T ss_pred -ccceEEEEEEECCCCCccEEEEcCCCeeEEEecCCCCCCEEEEEEEEeCCCCcCcccCce
Confidence 488999999987644333334456678899999999999999999999999999877643
No 8
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=100.00 E-value=1.5e-30 Score=264.24 Aligned_cols=338 Identities=15% Similarity=0.187 Sum_probs=249.8
Q ss_pred CCCCCCCceEEEEeCC-eEEEEecCCCCCCCCccceEEEEEEcCCCC---cEEEecccCCCeEEecCCCCCcEEEEEEEE
Q psy7040 54 GLDPEGPLEVSNIHKD-GCTLKWNKPKDDGGEPLEGYLVEKYDPETG---VWIPVGKTREPEMDVTGLTPGHEYKFRVKA 129 (716)
Q Consensus 54 ~~~p~~~l~~~~~~~~-s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~---~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a 129 (716)
++.||.+|.+...+.+ ++.|+|++|.. ..+.+|+|+|+..++. .+........+++.|.+|.|++.|.|+|+|
T Consensus 2 P~~~P~~l~~~~~~~~~sv~l~W~~~~~---~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a 78 (375)
T 3t1w_A 2 PLSPPTNLHLEANPDTGVLTVSWERSTT---PDITGYRITTTPTNGQQGNSLEEVVHADQSSCTFDNLSPGLEYNVSVYT 78 (375)
T ss_dssp CCCCCEEEEEEEETTTTEEEEEEECCSC---SSCCEEEEEEEETTCTTSCCEEEEEETTCCEEEECCCCTTCCEEEEEEE
T ss_pred CCCCCCccEEEecCCCeEEEEEEeCCCC---CCeeeEEEEEEECCCCCCcceeEEcCCCccEEEEcCCcCCCEEEEEEEE
Confidence 4567777888899999 99999998752 2499999999876532 344333445689999999999999999999
Q ss_pred EecCccCCCccccceEEecCCCCcccccccccceecccCCC--CCCceE--------------EEEecCCccEEEEeccc
Q psy7040 130 LNKEGESEPLETFSSIIARDPYSKYTSVSSLDSHKRSNQPC--GSGMVR--------------KVQHLDYNTKLGVRMAQ 193 (716)
Q Consensus 130 ~~~~g~~~~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~--G~~~~~--------------~~~~~~~~~~l~i~~l~ 193 (716)
.|..|.+.+..........+|..+.........+.+.|.++ |.-..+ ..........+.|.+|.
T Consensus 79 ~~~~g~s~~~~~~~~~~~p~p~~l~~~~~~~~si~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~ 158 (375)
T 3t1w_A 79 VKDDKESVPISDTIIPEVPQLTDLSFVDITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIFEDFVDSSVGYYTVTGLE 158 (375)
T ss_dssp EETTEECCCEEEEECCCCCCCSCCEEECCCSSEEEEECCCCCCTTEEEEEEEEEESSSCCSCEEEEECTTCCEEEEECCC
T ss_pred EcCCCCCCcEEeeEcCCCCCCceEEEEecCCCeEEEEEECCCCCCceEEEEEEEECCCCCceeEEEcCCCcceEEEeCCC
Confidence 99988877654332211122222222233445689999988 212222 22334456789999999
Q ss_pred cCcceEEEEEEEeCCCCceeEEEEEEecCCCCCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCCC-CCeEE
Q psy7040 194 RADAGFYTVTAENINGKDSVEVEVIVLDKPSPPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEAT-GRWTP 272 (716)
Q Consensus 194 ~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~-~~~~~ 272 (716)
++..|.|++.|.|..|...... +.....|.+|.+ +.+.....+++.|+|++|.. ..+.+|.|+++.... ..|..
T Consensus 159 p~t~Y~~~V~a~~~~g~s~~s~-~~~~t~~~~p~~-l~~~~~~~~si~l~W~~p~~---~~i~~Y~v~~~~~~~~~~~~~ 233 (375)
T 3t1w_A 159 PGIDYDISVITLINGGESAPTT-LTQQTAVPPPTD-LRFTNIGPDTMRVTWAPPPS---IDLTNFLVRYSPVKNEEDVAE 233 (375)
T ss_dssp TTCEEEEEEEEEETTEECCCEE-EEEECCCCCCEE-EEEESCCSSCEEEEEECCSS---CCCCEEEEEEEEGGGTTCCEE
T ss_pred CCCEEEEEEEEEeCCcccCCee-eeeecCCCCCce-eEEEecccCEEEEEEcCCCC---CCccEEEEEEEeCCCCCCcEE
Confidence 9999999999999998755444 333345556666 78887889999999998642 358999999987643 33433
Q ss_pred ccccCcccceEEEcCCCCCCeEEEEEEEEcCCCCCCCCcccceEEecCCCCCCCCCCCcEEEeeeCCeEEEEecCCCCCC
Q psy7040 273 AGETEGPVTGLEVEGLIPNHKYKFRVRAVNKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDFDTDFVELAWTPPEQNG 352 (716)
Q Consensus 273 ~~~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~ 352 (716)
.. .......+.+.+|.+++.|.|+|+|.|..|.+.+.... .. ..|.+|.++.+...+.+++.|+|.+|.
T Consensus 234 ~~-~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~~~~~~----~~---t~p~~P~~l~~~~~~~~sv~l~W~~p~--- 302 (375)
T 3t1w_A 234 LS-ISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLRGR----QK---TGLDSPTGIDFSDITANSFTVHWIAPR--- 302 (375)
T ss_dssp EE-ECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCEEEE----EE---CCCCCCEEEEEESCCSSCEEEEEECCS---
T ss_pred EE-cCCCcCEEEeCCCCCCCEEEEEEEEEcCCCcCCceeeE----Ee---cCCCCCCccEeeeccCCEEEEEECCCC---
Confidence 32 23456899999999999999999999988877554322 22 357788899998889999999999963
Q ss_pred CccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEEeCCCCCCCC
Q psy7040 353 GSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPS 411 (716)
Q Consensus 353 ~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s 411 (716)
+.+.+|.|+++..+...............++.|.+|.+++.|.|+|+|.|..|.|++.
T Consensus 303 -~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~G~s~p~ 360 (375)
T 3t1w_A 303 -ATITGYRIRHHPEHFSGRPREDRVPHSRNSITLTNLTPGTEYVVSIVALNGREESPLL 360 (375)
T ss_dssp -SCCSEEEEEEEETTCCSSCEEEEEETTCCEEEECSCCTTCEEEEEEEEEETTEECCCE
T ss_pred -cceeeEEEEEEECCCCCcceeEEcCCCccEEEECCCCCCCEEEEEEEEECCCCCCCce
Confidence 3689999999987642333334455678899999999999999999999999988654
No 9
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=99.98 E-value=1.6e-29 Score=256.07 Aligned_cols=346 Identities=16% Similarity=0.212 Sum_probs=242.6
Q ss_pred CCCCCCCCeEEeEEeCC-eEEEEEECCCCCCCCccceEEEEEEeCCCC---CeEEccccCcccceEEEcCCCCCCeEEEE
Q psy7040 222 KPSPPGGPLKVSNVHAE-GVTLDWKVPDDDGGQPIEKYVVDKMDEATG---RWTPAGETEGPVTGLEVEGLIPNHKYKFR 297 (716)
Q Consensus 222 ~p~~p~~~~~~~~~~~~-~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~---~~~~~~~~~~~~~~~~i~~L~p~~~y~~~ 297 (716)
||.+|.+ +.+...... ++.|+|++|.. .++.+|.|+++..... .|.... .....++.+.+|.|++.|.|+
T Consensus 1 Pp~~P~~-l~~~~~~~~~sv~l~W~~~~~---~~i~~Y~v~~~~~~~~~~~~~~~~~--~~~~~~~~i~~L~p~t~Y~~~ 74 (368)
T 1fnf_A 1 PLSPPTN-LHLEANPDTGVLTVSWERSTT---PDITGYRITTTPTNGQQGNSLEEVV--HADQSSCTFDNLSPGLEYNVS 74 (368)
T ss_dssp CCCCCEE-EEEEECSSSSCEEEEEECCSC---SSCCEEEEEEEETTTCSSCCEEEEE--CTTCCEEECCCCCTTSCEEEE
T ss_pred CCCCCcc-eEEEecCCCcEEEEEEeCCCC---CCceEEEEEEEECCCCCCceeEEEe--cCCcCEEEECCCCCCCEEEEE
Confidence 5778877 788877665 59999998652 3689999999876543 233322 345789999999999999999
Q ss_pred EEEEcCCCCCCCCcccceEEecCCCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCC-ceEEEee
Q psy7040 298 VRAVNKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSP-IWEKCAQ 376 (716)
Q Consensus 298 v~a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~-~~~~~~~ 376 (716)
|.|.|..|.+.+... . .. ..+.+|.++.+...+.+++.|+|.+|.. +.+.+|.|+++..+.. .|... .
T Consensus 75 V~a~~~~g~s~~~~~---~-~~---~~~~~p~~l~~~~~~~~si~l~W~~p~~---~~~~~Y~v~~~~~~~~~~~~~~-~ 143 (368)
T 1fnf_A 75 VYTVKDDKESVPISD---T-II---PAVPPPTDLRFTNIGPDTMRVTWAPPPS---IDLTNFLVRYSPVKNEEDVAEL-S 143 (368)
T ss_dssp EEEEETTEECCCEEE---E-EC---CCCCCCEEEEEESCCSSCEEEEEECCTT---CCCSEEEEEEEETTCTTCCEEE-E
T ss_pred EEEEcCCCccCceee---e-ec---CCCcCCceeEEEEcCCCeEEEEeeCCCC---CCCcEEEEEEEECCCCCccEEE-E
Confidence 999999887655422 1 11 2234788999998899999999999732 3689999999976543 34433 3
Q ss_pred ecCCCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccCCC
Q psy7040 377 TEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIP 456 (716)
Q Consensus 377 ~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~ 456 (716)
......++.+.+|.+++.|.|+|+|.|..|.+.+.. ......+.+|.
T Consensus 144 ~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~----~~~~~~~~~P~----------------------------- 190 (368)
T 1fnf_A 144 ISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLR----GRQKTGLDSPT----------------------------- 190 (368)
T ss_dssp ECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCEE----EEEECCCCCCE-----------------------------
T ss_pred cCCCcceEEecCCCCCCEEEEEEEEEeCCCCCCCeE----eeecCCCCCCC-----------------------------
Confidence 356778999999999999999999999988654311 11111111111
Q ss_pred eEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEEEEEEEEEEEEEeCCCCCCCCceee
Q psy7040 457 TKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVLGCSLKWNPPEDDGGAPIEY 536 (716)
Q Consensus 457 ~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v~~v~l~W~~p~~~~~~~i~~ 536 (716)
.+.+..+... ++.|+|++|. +.+.+
T Consensus 191 --------------------------~l~~~~~~~~-------------------------sv~l~W~~p~----~~i~~ 215 (368)
T 1fnf_A 191 --------------------------GIDFSDITAN-------------------------SFTVHWIAPR----ATITG 215 (368)
T ss_dssp --------------------------EEEEESCCSS-------------------------EEEEEEECCS----SCCSE
T ss_pred --------------------------ccEEEEccCC-------------------------EEEEEEeCCC----CCcCE
Confidence 1111222111 8999999874 34899
Q ss_pred EEEEEEecCCCceeeeEEEccceeeeeccccceeEEEEcCCCCCCeEEEEEEEEcCCCCCccceeee--ccCCCCCCccc
Q psy7040 537 YMVEKMETDTGKVLIKWIRTNDKRVTIDNVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVV--VTDKPSAPEGP 614 (716)
Q Consensus 537 y~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~~~~--v~~~p~~~~~~ 614 (716)
|.|++........ ..+.... .....+.+.+|.+++.|.|+|+|.|..|.+..+.... .+.+|..+. +
T Consensus 216 Y~v~~~~~~~~~~-~~~~~~~---------~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~~~~~~~t~p~~P~~l~-~ 284 (368)
T 1fnf_A 216 YRIRHHPEHFSGR-PREDRVP---------HSRNSITLTNLTPGTEYVVSIVALNGREESPLLIGQQSTVSDVPRDLE-V 284 (368)
T ss_dssp EEEEEECSCCSSC-CEEEEEE---------TTCCEEEEESCCTTCEEEEEEEEEETTEECCCEEEEEECCCCSCEEEE-E
T ss_pred EEEEEecCCCCCC-ccEEEeC---------CCcCEEEECCCCCCCEEEEEEEEEeCCccCCcccccccCCCCCCCeeE-E
Confidence 9999987653110 1111111 1238899999999999999999999999888765433 355565555 6
Q ss_pred eeeccceeEEEEE-----EeeEEEEeeeeccCceeeEEEEeCCeEeeecccceeeEEEEccCCCCCcEEEEEEEEcCCCC
Q psy7040 615 IQWLLTLTDVTWE-----ISNYLQELHSSLMPISLESQYLMNDKRVTIDNVDYFTKITIRPLQRSDTAQYTVTATNSQGK 689 (716)
Q Consensus 615 ~~~~~~~v~l~w~-----i~~y~v~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~y~~~a~n~~G~ 689 (716)
..++.+++.|+|. +.+|.|.++...-.. .. ..+. .......+.|.+|.+++.|.|+|.|.|..|.
T Consensus 285 ~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~--~~------~~~~--~~~~~~~~~~~~L~p~t~Y~~~V~A~~~~G~ 354 (368)
T 1fnf_A 285 VAATPTSLLISWDAPAVTVRYYRITYGETGGNS--PV------QEFT--VPGSKSTATISGLKPGVDYTITVYAVTGRGD 354 (368)
T ss_dssp EEEETTEEEEEEECCSSCCSEEEEEEEETTCCS--CC------EEEE--EETTCCEEEECSCCTTCCEEEEEEEECCCSS
T ss_pred EecCCCEEEEEeeCCCCccceEEEEEEECCCCC--cc------EEEE--cCCCeeEEEecCCCCCCEEEEEEEEeCCCCc
Confidence 6678899999999 789999876532100 00 0000 1123468999999999999999999999998
Q ss_pred ceee
Q psy7040 690 DQVF 693 (716)
Q Consensus 690 ~~~s 693 (716)
+..+
T Consensus 355 g~~s 358 (368)
T 1fnf_A 355 SPAS 358 (368)
T ss_dssp SCCB
T ss_pred Cccc
Confidence 8554
No 10
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}
Probab=99.98 E-value=2e-31 Score=288.07 Aligned_cols=412 Identities=17% Similarity=0.186 Sum_probs=271.9
Q ss_pred CCCCCCCcEEEEEeCCeEEEEeeCCCCCCCcceeeEEEEEcc--------------------------------------
Q psy7040 12 PAKPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKDR-------------------------------------- 53 (716)
Q Consensus 12 p~~p~~~l~~~~~~~~~~~~~W~~p~~~~~~~~~~y~~~~~~-------------------------------------- 53 (716)
|..+|.+|.+...+..++.++|+++.+.+ .+..|.+.+..
T Consensus 102 pP~~P~nl~c~~~~~~~~~~~W~~~~~~~--~~~~y~l~~~~~~~~~~~c~~~~~~~~~c~~~~~l~~~~~Y~~~v~a~n 179 (589)
T 3l5h_A 102 PPEKPKNLSCIVNEGKKMRCEWDGGRETH--LETNFTLKSEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAEN 179 (589)
T ss_dssp CCCCCEEEEEEEETTSCEEEEEECCSCCS--SCEEEEECCBCSSSBCCCEECBTTBSSCCBCCSCCCSSSCEEECEEEEE
T ss_pred CCCCCEeeEEEECCCceEEEEECCCCcCC--cCceEEEEEEEcCCCcccCCCCCCCcEEEEECCCCchheeEEEEEEEEe
Confidence 44445578888889999999999986432 36677665421
Q ss_pred ------------------CCCCCCCceEE--EEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCCcEEEecc----cCC
Q psy7040 54 ------------------GLDPEGPLEVS--NIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETGVWIPVGK----TRE 109 (716)
Q Consensus 54 ------------------~~~p~~~l~~~--~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~----~~~ 109 (716)
.+.||..+.+. ..+.+++.|+|++|...+ .++..|+|+|+..+...|..+.. ...
T Consensus 180 ~~G~~~s~~~~~~~~~~~~p~pP~~~~~~~~~~~~~~v~l~W~~p~~~~-~~~~~Y~v~~~~~~~~~w~~~~~~~~~~~~ 258 (589)
T 3l5h_A 180 ALGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKS-VIILKYNIQYRTKDASTWSQIPPEDTASTR 258 (589)
T ss_dssp SSCCBCCCCEEECGGGSEECCCCCSCEEECTTTCTTCEEEECCCCGGGG-TSCEEEEEEEEETTCSCCBCCCTTSSCSCC
T ss_pred CCCCcccccEEEccccEEEcCCCceEEEEecCCCCCeEEEEeCCCCCCC-eeeEEEEEEECCCCCCCcEEEccccCcCce
Confidence 12345556663 457889999999987543 46899999999988888876532 224
Q ss_pred CeEEecCCCCCcEEEEEEEEEecCccCCCccccceEEecCCCCcccccccccceecccCCCCCCceEEEEecCCccEEEE
Q psy7040 110 PEMDVTGLTPGHEYKFRVKALNKEGESEPLETFSSIIARDPYSKYTSVSSLDSHKRSNQPCGSGMVRKVQHLDYNTKLGV 189 (716)
Q Consensus 110 ~~~~i~~L~~~~~y~~~v~a~~~~g~~~~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~G~~~~~~~~~~~~~~~l~i 189 (716)
+++.|.+|.|++.|.|+|+|.|..|.+.+|.....+....+
T Consensus 259 ~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~S~~S~~~~~~T~--------------------------------------- 299 (589)
T 3l5h_A 259 SSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITY--------------------------------------- 299 (589)
T ss_dssp SEEEECSCCSSCCEEEEEEEEESSSCSCCCCCCCCBCCCCC---------------------------------------
T ss_pred eEEEECCCCCCCEEEEEEEEEeCCCCCccCCCCCccccccC---------------------------------------
Confidence 78999999999999999999999988766543332211100
Q ss_pred eccccCcceEEEEEEEeCCCCceeEEEEEEecCC-CCCCCCeEE----eEEeCCeEEEEEECCC-CCCCCccceEEEEEE
Q psy7040 190 RMAQRADAGFYTVTAENINGKDSVEVEVIVLDKP-SPPGGPLKV----SNVHAEGVTLDWKVPD-DDGGQPIEKYVVDKM 263 (716)
Q Consensus 190 ~~l~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p-~~p~~~~~~----~~~~~~~~~l~W~~p~-~~~~~~~~~y~v~~~ 263 (716)
...| .+|.. +.. ......++.|.|+++. ...+..+.+|.|.+.
T Consensus 300 ------------------------------~~~P~~~p~~-~~~v~~~~~~~~~~v~l~W~p~~~~~~~g~i~~Y~v~~~ 348 (589)
T 3l5h_A 300 ------------------------------EDRPSKAPSF-WYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLT 348 (589)
T ss_dssp ------------------------------CCCCCSCCCE-EEECCSCSSTTSCCEEEEECCCCTTTSSSCCCEEEEEEC
T ss_pred ------------------------------ccCCCCCCcE-EEEeecCcCCCcceEEEEEeeCCchhccCceeeEEEEEe
Confidence 0123 33332 222 2345688999999632 233447999999986
Q ss_pred eCCCCCeEEccccCcccceEEEcCCCCCCeEEEEEEEEcCCCCCCCCcccceEEecCCCCCCCCCCCcEEEeeeCCeEEE
Q psy7040 264 DEATGRWTPAGETEGPVTGLEVEGLIPNHKYKFRVRAVNKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDFDTDFVEL 343 (716)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l 343 (716)
.... .|... ......+.+ |.+++.|.|+|.|.|..|.+..+... .......+|.++.++.+... ++++.|
T Consensus 349 ~~~~-~~~~~---~~~~~~~~~--l~~~~~Y~~~V~A~n~~G~~~~s~~~---~~~~~~~~~~p~~~l~~~~~-~~si~l 418 (589)
T 3l5h_A 349 RWKS-HLQNY---TVNATKLTV--NLTNDRYLATLTVRNLVGKSDAAVLT---IPACDFQATHPVMDLKAFPK-DNMLWV 418 (589)
T ss_dssp CTTS-CCCBC---CCSSSCCEE--CCCSSCCCEEEEEEBTTBCCCCCCCC---CCCTTCCCCSCCCSCEEEEC-SSSEEE
T ss_pred cCCC-Cceee---ccCCceEEE--EeCCCCEEEEEEEEeCCccCCCeEEE---eecccccCCCCcceEEEEEC-CCeEEE
Confidence 5443 23222 223455555 88999999999999999988776543 11122234556678888755 689999
Q ss_pred EecCCCCCCCccceEEEEEEeecCCCce--EEEee-ecCCCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEee
Q psy7040 344 AWTPPEQNGGSPIVGYIIEKKEKYSPIW--EKCAQ-TEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIAR 420 (716)
Q Consensus 344 ~W~~p~~~~~~~i~~y~v~~~~~~~~~~--~~~~~-~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~ 420 (716)
+|.+|.. .+.+|.|+|+..+.... ..... .......+.+.+|.+++.|.|+|+|.|..|.+..+.. ...
T Consensus 419 ~W~~p~~----~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~~~~g~g~~~~~----~~~ 490 (589)
T 3l5h_A 419 EWTTPRE----SVKKYILEWCVLSDKAPCITDWQQEDGTVHRTYLRGNLAESKCYLITVTPVYADGPGSPESI----KAY 490 (589)
T ss_dssp ECCCCSS----CCSCBCCEEEEECSSSCCCEEECCBCSSCCEEECCSCCCSSSEEEEEECBEETTEECCCEEE----EEE
T ss_pred EEECCCC----CccEEEEEEEECCCCCCCccCcEEeeCCcceEEehhccccCcEEEEEEEEEeCCcccCCEEE----EEE
Confidence 9999753 58899999987653211 11111 2333455677999999999999999999988765321 111
Q ss_pred cCCCCCcccccccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEE
Q psy7040 421 AKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLA 500 (716)
Q Consensus 421 ~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~ 500 (716)
....+|... + .+.+..+...
T Consensus 491 t~~~~P~~p--------------------------p--------------------------~l~~~~~~~~-------- 510 (589)
T 3l5h_A 491 LKQAPPSKG--------------------------P--------------------------TVRTKKVGKN-------- 510 (589)
T ss_dssp SSCCCCSSC--------------------------C--------------------------CCCEECCCSS--------
T ss_pred eccCCCCCC--------------------------C--------------------------eEEEeecccc--------
Confidence 111111100 0 0011111111
Q ss_pred EEcCCCceeeEEEEEEEEEEEEEeCCC-CCCCCceeeEEEEEEecCCCceeeeEEEccceeeeeccccceeEEEEcCCCC
Q psy7040 501 VKNSWGTDKGTAKVTVLGCSLKWNPPE-DDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDNVDYFTKITIRPLQR 579 (716)
Q Consensus 501 a~n~~g~~~~s~~~~v~~v~l~W~~p~-~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~i~~L~~ 579 (716)
++.|+|.++. ...++.+.+|.|++..... ..|.... ......+.|.+|++
T Consensus 511 -----------------sv~l~W~~~~~~~~~g~i~~Y~v~~~~~~~----~~~~~~~--------~~~~~~~~~~~L~p 561 (589)
T 3l5h_A 511 -----------------EAVLEWDQLPVDVQNGFIRNYTIFYRTIIG----NETAVNV--------DSSHTEYTLSSLTS 561 (589)
T ss_dssp -----------------CBEEBCCCCCHHHHCSCEEEEEECCBCSSC----CCCCEEE--------CTTCCBCCBCSCCS
T ss_pred -----------------eEEEEecCCCHHHcCccceeEEEEEEeCCC----CeEEEEe--------CCcccEEEecCCCC
Confidence 8999999853 3334569999999987765 3331111 11238899999999
Q ss_pred CCeEEEEEEEEcCCCCCccceeeec
Q psy7040 580 SDTAQYTVTATNSQGKDQVFIEVVV 604 (716)
Q Consensus 580 ~~~y~~~v~a~n~~G~~~~s~~~~v 604 (716)
++.|.|+|+|.|..| |..+..+.+
T Consensus 562 ~t~Y~~~V~A~n~~G-~~~S~~~~~ 585 (589)
T 3l5h_A 562 DTLYMVRMAAYTDEG-GKDGPEFTF 585 (589)
T ss_dssp SCCEECCEEEEETTE-EEECCCCEE
T ss_pred CCEEEEEEEEEeCCC-CCCCCCeEE
Confidence 999999999999999 777765543
No 11
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.97 E-value=1.8e-30 Score=286.81 Aligned_cols=284 Identities=19% Similarity=0.226 Sum_probs=214.1
Q ss_pred EEEccCCCCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCCcEEEecccCCCeEEecCCCCCcEEEEEEE
Q psy7040 49 VEKDRGLDPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETGVWIPVGKTREPEMDVTGLTPGHEYKFRVK 128 (716)
Q Consensus 49 ~~~~~~~~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~ 128 (716)
+.....+.|+.++.+..++.+++.|+|.++..+++.++.+|.|+|+.. ...|.........++.|.+|.+++.|.|+|+
T Consensus 256 l~V~~~P~~~~~p~~~~~~~~~v~l~w~~~~~~g~~~i~~Y~v~~~~~-~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~ 334 (731)
T 2v5y_A 256 LVVKEPPVPIAPPQLASVGATYLWIQLNANSINGDGPIVAREVEYCTA-SGSWNDRQPVDSTSYKIGHLDPDTEYEISVL 334 (731)
T ss_dssp EEEECCCCBSSCCEEEEECSSCEEEECCCSSBSSCSCCCEEEEEEEES-SSSCEEEEECCSSEEEECSCCTTCEEEEEEE
T ss_pred EEEecCCCCCCCcceeccCCceEEEEeCCcccCCCCccEEEEEEEEEC-CCCceEEeccCcceEEEeCCCCCCEEEEEEE
Confidence 344445566777888889999999999988766667899999999875 4567766665668999999999999999999
Q ss_pred EE--ecCccCCCccccceEEecCCCCcccccccccceecccCCCCCCceEEEEecCCccEEEEeccccCcceEEEEEEEe
Q psy7040 129 AL--NKEGESEPLETFSSIIARDPYSKYTSVSSLDSHKRSNQPCGSGMVRKVQHLDYNTKLGVRMAQRADAGFYTVTAEN 206 (716)
Q Consensus 129 a~--~~~g~~~~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~G~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n 206 (716)
|. |..|.+.++......+..
T Consensus 335 A~~~N~~G~s~~S~~~~~~t~~---------------------------------------------------------- 356 (731)
T 2v5y_A 335 LTRPGEGGTGSPGPALRTRTKC---------------------------------------------------------- 356 (731)
T ss_dssp EECSSTTCSCCBCCCEEEECCC----------------------------------------------------------
T ss_pred EEecCCCccccCCCcEEeeecC----------------------------------------------------------
Confidence 99 999988877554332211
Q ss_pred CCCCceeEEEEEEecCCCCCCCCeEEeEEeCCeEEEEEECCCCCC-CCccceEEEEEEeCCCCCeEEc----cccCcccc
Q psy7040 207 INGKDSVEVEVIVLDKPSPPGGPLKVSNVHAEGVTLDWKVPDDDG-GQPIEKYVVDKMDEATGRWTPA----GETEGPVT 281 (716)
Q Consensus 207 ~~g~~~~~~~~~v~~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~-~~~~~~y~v~~~~~~~~~~~~~----~~~~~~~~ 281 (716)
..+|.+|.+ +.+.....+++.|+|++|.... ..++.+|.|+++......+... ........
T Consensus 357 -------------~~p~~~P~~-~~~~~~~~~sv~l~W~~p~~~~~~~~~~~y~v~y~~~~~~~~~~~~~~~~~~~~~~~ 422 (731)
T 2v5y_A 357 -------------ADPMRGPRK-LEVVEVKSRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREEVSWDTENSHP 422 (731)
T ss_dssp -------------CCCSCCCEE-EEEEEECSSCEEEEEECCCHHHHCSSSCEEEEEEEEESSSSEEEEEEEECCSSCSSC
T ss_pred -------------CCCCCCCce-eEEEeccCCeEEEEEECCCcccccceeeeEEEEEEEccCCCCccceeEEEEecCCcc
Confidence 124567776 7888889999999999875432 2357799999876654433211 13345678
Q ss_pred eEEEcCCCCCCeEEEEEEEEcCCCCCCCCcccceEEecCCCCCCCCCC--CcEEEeeeCCeEEEEecCCCCCCCccceEE
Q psy7040 282 GLEVEGLIPNHKYKFRVRAVNKQGKSEPLTTTASIEAKNPFNQPGKPG--TPEIKDFDTDFVELAWTPPEQNGGSPIVGY 359 (716)
Q Consensus 282 ~~~i~~L~p~~~y~~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~--~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y 359 (716)
.+.|.+|.|++.|.|+|.|.|..|.+. +. .+.+.+...+|.+|. .+.... ..+++.|+|.+|...+| .|.+|
T Consensus 423 ~~~i~~L~p~t~Y~~~V~A~n~~G~s~-S~---~~~~~T~~~~P~~p~~~~~~~~~-~~~si~l~W~~P~~~~g-~i~~Y 496 (731)
T 2v5y_A 423 QHTITNLSPYTNVSVKLILMNPEGRKE-SQ---ELIVQTDEDLPGAVPTESIQGST-FEEKIFLQWREPTQTYG-VITLY 496 (731)
T ss_dssp EEEECSCCSSCEEEEEEEEECSSCEEE-CC---CEEEECCCCCCCCCCTTTCEEEE-ETTEEEEECCCCSCCSS-CCCEE
T ss_pred eEEECCCCCCCEEEEEEEEEcCCCCCC-Cc---eEEEEccCCCCCCCCcceEEeee-cCCeEEEEEcCCCCCCC-Cccce
Confidence 999999999999999999999999863 33 355555667777664 455443 47899999999876544 89999
Q ss_pred EEEEeecCCC-------ceEEEeeecCCCCeEEecCCCCCCeEEEEEEEEeCCCCCCCC
Q psy7040 360 IIEKKEKYSP-------IWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPS 411 (716)
Q Consensus 360 ~v~~~~~~~~-------~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s 411 (716)
+|+|+..+.. .+...........+++|.+|.|++.|.|+|+|.|..|.|.++
T Consensus 497 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s 555 (731)
T 2v5y_A 497 EITYKAVSSFDPEIDLSNQSGRVSKLGNETHFLFFGLYPGTTYSFTIRASTAKGFGPPA 555 (731)
T ss_dssp EEEEEEEEECC---CCCCCEEEEEEETTCCEEEECSCCTTEEEEEEEEEEETTEEEEEE
T ss_pred EEEEEECcCCCccccccCcceEEeecCCcceEEecCCCCCCEEEEEEEEEeCCccCCCc
Confidence 9999875422 112223345677899999999999999999999999988776
No 12
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=99.97 E-value=3.8e-29 Score=253.92 Aligned_cols=349 Identities=17% Similarity=0.215 Sum_probs=246.1
Q ss_pred CCCCCCCCeEEeEEeCC-eEEEEEECCCCCCCCccceEEEEEEeCCCC---CeEEccccCcccceEEEcCCCCCCeEEEE
Q psy7040 222 KPSPPGGPLKVSNVHAE-GVTLDWKVPDDDGGQPIEKYVVDKMDEATG---RWTPAGETEGPVTGLEVEGLIPNHKYKFR 297 (716)
Q Consensus 222 ~p~~p~~~~~~~~~~~~-~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~---~~~~~~~~~~~~~~~~i~~L~p~~~y~~~ 297 (716)
|+.+|.+ +.+.....+ ++.|+|++|.. + .+.+|.|++...... .|... ......++.|.+|.|++.|.|+
T Consensus 2 P~~~P~~-l~~~~~~~~~sv~l~W~~~~~--~-~~~~Y~v~~~~~~~~~~~~~~~~--~~~~~~~~~i~~L~p~t~Y~~~ 75 (375)
T 3t1w_A 2 PLSPPTN-LHLEANPDTGVLTVSWERSTT--P-DITGYRITTTPTNGQQGNSLEEV--VHADQSSCTFDNLSPGLEYNVS 75 (375)
T ss_dssp CCCCCEE-EEEEEETTTTEEEEEEECCSC--S-SCCEEEEEEEETTCTTSCCEEEE--EETTCCEEEECCCCTTCCEEEE
T ss_pred CCCCCCc-cEEEecCCCeEEEEEEeCCCC--C-CeeeEEEEEEECCCCCCcceeEE--cCCCccEEEEcCCcCCCEEEEE
Confidence 5677777 888888888 99999998643 2 589999999876432 23221 2245789999999999999999
Q ss_pred EEEEcCCCCCCCCcccceEEecCCCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeee
Q psy7040 298 VRAVNKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQT 377 (716)
Q Consensus 298 v~a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~ 377 (716)
|+|.|..|.+.+... .. ....| +|.++.+...+.+++.|+|.+|. ++.+.+|.|+++..+..........
T Consensus 76 V~a~~~~g~s~~~~~---~~---~~~~p-~p~~l~~~~~~~~si~l~W~~~~---~~~i~~Y~v~~~~~~~~~~~~~~~~ 145 (375)
T 3t1w_A 76 VYTVKDDKESVPISD---TI---IPEVP-QLTDLSFVDITDSSIGLRWTPLN---SSTIIGYRITVVAAGEGIPIFEDFV 145 (375)
T ss_dssp EEEEETTEECCCEEE---EE---CCCCC-CCSCCEEECCCSSEEEEECCCCC---CTTEEEEEEEEEESSSCCSCEEEEE
T ss_pred EEEEcCCCCCCcEEe---eE---cCCCC-CCceEEEEecCCCeEEEEEECCC---CCCceEEEEEEEECCCCCceeEEEc
Confidence 999998876654332 12 12344 48899999999999999999864 3479999999998764433333345
Q ss_pred cCCCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccCCCe
Q psy7040 378 EGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPT 457 (716)
Q Consensus 378 ~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~ 457 (716)
.....++.+.+|.+++.|.|+|+|.|..|.+.++.... ...+.+|.
T Consensus 146 ~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~s~~~~----~t~~~~p~------------------------------ 191 (375)
T 3t1w_A 146 DSSVGYYTVTGLEPGIDYDISVITLINGGESAPTTLTQ----QTAVPPPT------------------------------ 191 (375)
T ss_dssp CTTCCEEEEECCCTTCEEEEEEEEEETTEECCCEEEEE----ECCCCCCE------------------------------
T ss_pred CCCcceEEEeCCCCCCEEEEEEEEEeCCcccCCeeeee----ecCCCCCc------------------------------
Confidence 66788999999999999999999999999776543211 00000111
Q ss_pred EEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEEEEEEEEEEEEEeCCCCCCCCceeeE
Q psy7040 458 KEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVLGCSLKWNPPEDDGGAPIEYY 537 (716)
Q Consensus 458 ~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v~~v~l~W~~p~~~~~~~i~~y 537 (716)
.+.+...... ++.|+|++|. ++.+.+|
T Consensus 192 -------------------------~l~~~~~~~~-------------------------si~l~W~~p~---~~~i~~Y 218 (375)
T 3t1w_A 192 -------------------------DLRFTNIGPD-------------------------TMRVTWAPPP---SIDLTNF 218 (375)
T ss_dssp -------------------------EEEEESCCSS-------------------------CEEEEEECCS---SCCCCEE
T ss_pred -------------------------eeEEEecccC-------------------------EEEEEEcCCC---CCCccEE
Confidence 1112222222 8999999974 2448999
Q ss_pred EEEEEecCCCceeeeEEEccceeeeeccccceeEEEEcCCCCCCeEEEEEEEEcCCCCCccceeee--ccCCCCCCccce
Q psy7040 538 MVEKMETDTGKVLIKWIRTNDKRVTIDNVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVV--VTDKPSAPEGPI 615 (716)
Q Consensus 538 ~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~~~~--v~~~p~~~~~~~ 615 (716)
.|++...... ..|.... .......+.+.+|.+++.|.|+|+|.|..|.+.+..... .+.+|..+. +.
T Consensus 219 ~v~~~~~~~~---~~~~~~~-------~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~~~~~~~~t~p~~P~~l~-~~ 287 (375)
T 3t1w_A 219 LVRYSPVKNE---EDVAELS-------ISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLRGRQKTGLDSPTGID-FS 287 (375)
T ss_dssp EEEEEEGGGT---TCCEEEE-------ECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCCCEEEE-EE
T ss_pred EEEEEeCCCC---CCcEEEE-------cCCCcCEEEeCCCCCCCEEEEEEEEEcCCCcCCceeeEEecCCCCCCccE-ee
Confidence 9999876531 1121111 011238899999999999999999999999887765443 345555555 56
Q ss_pred eeccceeEEEEE-----EeeEEEEeeeeccCceeeEEEEeCCeEeeecccceeeEEEEccCCCCCcEEEEEEEEcCCCCc
Q psy7040 616 QWLLTLTDVTWE-----ISNYLQELHSSLMPISLESQYLMNDKRVTIDNVDYFTKITIRPLQRSDTAQYTVTATNSQGKD 690 (716)
Q Consensus 616 ~~~~~~v~l~w~-----i~~y~v~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~y~~~a~n~~G~~ 690 (716)
.++.+++.|+|. +.+|.|.++..... +.............+.|.+|.+++.|.|+|.|.|..|.+
T Consensus 288 ~~~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~----------~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~G~s 357 (375)
T 3t1w_A 288 DITANSFTVHWIAPRATITGYRIRHHPEHFS----------GRPREDRVPHSRNSITLTNLTPGTEYVVSIVALNGREES 357 (375)
T ss_dssp SCCSSCEEEEEECCSSCCSEEEEEEEETTCC----------SSCEEEEEETTCCEEEECSCCTTCEEEEEEEEEETTEEC
T ss_pred eccCCEEEEEECCCCcceeeEEEEEEECCCC----------CcceeEEcCCCccEEEECCCCCCCEEEEEEEEECCCCCC
Confidence 677899999999 78999987653210 100011111234689999999999999999999999998
Q ss_pred eeeE
Q psy7040 691 QVFI 694 (716)
Q Consensus 691 ~~s~ 694 (716)
....
T Consensus 358 ~p~s 361 (375)
T 3t1w_A 358 PLLI 361 (375)
T ss_dssp CCEE
T ss_pred Ccee
Confidence 5443
No 13
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.97 E-value=1.3e-27 Score=244.33 Aligned_cols=297 Identities=22% Similarity=0.284 Sum_probs=228.4
Q ss_pred CeEEecCCCCCcEEEEEEEEEecCccCCCccccceEEecCC----CCc---ccccccccceecccCCC--------C---
Q psy7040 110 PEMDVTGLTPGHEYKFRVKALNKEGESEPLETFSSIIARDP----YSK---YTSVSSLDSHKRSNQPC--------G--- 171 (716)
Q Consensus 110 ~~~~i~~L~~~~~y~~~v~a~~~~g~~~~s~~~~~~~~~~p----~~~---~~~~~~~~~~~~~~~p~--------G--- 171 (716)
..|.|.++...+.+.|+|.|.|..|....+ ....+...+. ... .......+.|.+.+.|+ |
T Consensus 63 ~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~-~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l 141 (389)
T 2jll_A 63 SSLHIKDVKLSDSGRYDCEAASRIGGHQKS-MYLDIEYAPKFISNQTIYYSWEGNPINISCDVKSNPPASIHWRRDKLVL 141 (389)
T ss_dssp EEEEEESCCGGGCEEEEEEEECSSCEEEEE-EEEEEEEEEEECCSCCEEEECTTCCEEEEECEEEESCCEEEEEETTEES
T ss_pred ceEEEcccChhhCEEEEEEEEeCCCCcceE-EEEEEEeCCEEecCcceEEeccCCEEEEEEEEEecCCCeEEEEECCccC
Confidence 589999999999999999999998864322 2222221111 111 11223346687777665 2
Q ss_pred ---CCceEEEEecCCccEEEEeccccCcceEEEEEEEeCCCCceeEEEEEEecCCCCCCCCeEEeEEeCCeEEEEEECCC
Q psy7040 172 ---SGMVRKVQHLDYNTKLGVRMAQRADAGFYTVTAENINGKDSVEVEVIVLDKPSPPGGPLKVSNVHAEGVTLDWKVPD 248 (716)
Q Consensus 172 ---~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~~p~~~~~~~~~~~~~~~l~W~~p~ 248 (716)
...++.+...+....|.|.++...|.|.|+|.|.|..|.....+.+.+..+|.+|.. +.+......++.|.|.+|.
T Consensus 142 ~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~P~~-~~~~~~~~~~~~l~w~~p~ 220 (389)
T 2jll_A 142 PAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALADVPSSPYG-VKIIELSQTTAKVSFNKPD 220 (389)
T ss_dssp SCTTCTTEEEEECSSCEEEEECCCSTTSSEEEEEEEEETTEEEEEEEEEEECCCCCCCEE-EEEEEECSSCEEEEEECCS
T ss_pred CcccCceEEEeccCCEEEEEECCCChhhCEEEEEEEEcCCCcEEEEEEEEecCCCCCCcc-eEEeeccCCEEEEEEeCCC
Confidence 234677777777889999999999999999999999999988899999999998876 7788888899999999887
Q ss_pred CCCCCccceEEEEEEeCCCCCeEEccccCcccceEEEcCCCCCCeEEEEEEEEcCCCCCCCCcccceEEecCCCCCCCCC
Q psy7040 249 DDGGQPIEKYVVDKMDEATGRWTPAGETEGPVTGLEVEGLIPNHKYKFRVRAVNKQGKSEPLTTTASIEAKNPFNQPGKP 328 (716)
Q Consensus 249 ~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p~~p 328 (716)
.+++.++..|.+++...+...|...... .....+.|.+|.+++.|.|+|.|.|..|.+.++......+ .+..+|.+|
T Consensus 221 ~~~g~pi~~y~v~~~~~~~~~~~~~~~~-~~~~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s~~~~~~t--~~~~~p~~p 297 (389)
T 2jll_A 221 SHGGVPIHHYQVDVKEVASEIWKIVRSH-GVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQT--LPVREPSPP 297 (389)
T ss_dssp CCTTSCEEEEEEEEEETTCSCCEEEECS-TTCSEEEECSCCTTCEEEEEEEEEESSCBCCCCCCEEEEC--CCCCCCCCC
T ss_pred CCCCcceEEEEEEEEECCCcccEEeecc-CCcceEEECCccCCCEEEEEEEEEcCCccCCCCcceEEEe--cCCCCCCCC
Confidence 7788889999999998888888755432 4567899999999999999999999999887776642222 222356666
Q ss_pred CCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEEeCCCCC
Q psy7040 329 GTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPG 408 (716)
Q Consensus 329 ~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~ 408 (716)
.+.....+.+++.|+|.+|. ++++++.+|.|+|+..+...|...........++.|.+|.+++.|.|+|+|.|..|.|
T Consensus 298 -~~~~~~~~~~~v~l~W~~p~-~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~V~A~n~~G~s 375 (389)
T 2jll_A 298 -SIHGQPSSGKSFKLSITKQD-DGGAPILEYIVKYRSKDKEDQWLEKKVQGNKDHIILEHLQWTMGYEVQITAANRLGYS 375 (389)
T ss_dssp -CEEEEEETTTEEEEEECCCC-CCSSCCCEEEEEEEC-----CCBCCEECTTCCEEEECSCCTTCEEEEEEEEEC-CCBC
T ss_pred -ccccccCcCCEEEEEEECCC-CCCCcccEEEEEEEeCCCCcceeEeeccCCcceEEeCCcCCCCEEEEEEEEEcCCcCC
Confidence 47777778999999999875 4566899999999987666676555566778899999999999999999999999998
Q ss_pred CCCCC
Q psy7040 409 EPSDP 413 (716)
Q Consensus 409 ~~s~~ 413 (716)
.++..
T Consensus 376 ~~s~~ 380 (389)
T 2jll_A 376 EPTVY 380 (389)
T ss_dssp CCEEE
T ss_pred Cceee
Confidence 87754
No 14
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.96 E-value=2.4e-27 Score=266.59 Aligned_cols=581 Identities=15% Similarity=0.108 Sum_probs=340.7
Q ss_pred eEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCC----------cEEEecccCCCeEEecCCCCCcE-EEEEEEEE
Q psy7040 62 EVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETG----------VWIPVGKTREPEMDVTGLTPGHE-YKFRVKAL 130 (716)
Q Consensus 62 ~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~----------~~~~~~~~~~~~~~i~~L~~~~~-y~~~v~a~ 130 (716)
.+......++.|.+..+... +-....+.|...+.. .... ....++.|.++++.+. |.|+|+|.
T Consensus 147 ~~~v~~G~~v~L~C~~~~~~---~~~~~~v~W~~~~~~~~~~~~~~~~r~~~---~~~g~L~I~~v~~~D~~g~Y~C~~~ 220 (816)
T 3dmk_A 147 KEHVIRGNSAVIKCLIPSFV---ADFVEVVSWHTDEEENYFPGAEYDGKYLV---LPSGELHIREVGPEDGYKSYQCRTK 220 (816)
T ss_dssp CEEEETTSCEEECCBCCHHH---HTTEEEEEEEETTSCEECBSSCBTTTEEE---CTTSCEEESSCCGGGSSCEEEEEEE
T ss_pred cceEecCceEEEEECCCccc---cccEEEEEEEecCceEeccccCCCceEEE---ecCceEEEecCChhhccceeEEEEe
Confidence 34455677899999875311 111133444433221 1111 1235799999999998 99999999
Q ss_pred ecCccC-CCccccceEEecC-----CCCc-----------ccccccccceecccCCC--------CCCc--eEEEEe---
Q psy7040 131 NKEGES-EPLETFSSIIARD-----PYSK-----------YTSVSSLDSHKRSNQPC--------GSGM--VRKVQH--- 180 (716)
Q Consensus 131 ~~~g~~-~~s~~~~~~~~~~-----p~~~-----------~~~~~~~~~~~~~~~p~--------G~~~--~~~~~~--- 180 (716)
+..+.. ..+.....+.... ++.+ .......+.|.+.+.|. |.+. ...+..
T Consensus 221 ~~~~~~~~~s~~~~~l~v~~~~~~~~P~i~~~~~~~~~~v~~g~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~ 300 (816)
T 3dmk_A 221 HRLTGETRLSATKGRLVITEPISSAVPKVVSLAKFDMKTYSGSSTMALLCPAQGYPVPVFRWYKFIEGTTRKQAVVLNDR 300 (816)
T ss_dssp ETTTCCEEECSBCEEEEEECCCSCCCCBCCGGGGEEEEEECTTSCEEECCCCBCSSCCEEEEEEECTTSSCEEECCCSSS
T ss_pred eeeeeeeeecccccceEEeCCCCCCCCccccccCccceEEeCCCeEEEEEEeeecCCCeEEEEeCCCCCccCcceecCCc
Confidence 754321 1111111122111 1111 01112235587777655 1111 111000
Q ss_pred -cCCccEEEEeccccCcceEEEEEEEeCCCCceeEEEEEEecCCCCCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEE
Q psy7040 181 -LDYNTKLGVRMAQRADAGFYTVTAENINGKDSVEVEVIVLDKPSPPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYV 259 (716)
Q Consensus 181 -~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~ 259 (716)
......|.|.+++..|+|.|+|.|.|..|..+....+.|..+|.....+.......+..+.|.|.... .+...+.
T Consensus 301 ~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~v~~G~~v~l~C~~~g----~p~~~v~ 376 (816)
T 3dmk_A 301 VKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTG----NPIKTVS 376 (816)
T ss_dssp EEEETTEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECEEEEEEEESSEEECCTTSCEEEEEEEEE----ECCCEEE
T ss_pred eEeccceEEECCCCHhHCEEEEEEEEcCCCceEEEEEEEEcCCCceeeCCCceEecCCCCEEEEEEEec----cCCCEEE
Confidence 11356899999999999999999999999988888888876553322222344456788999998522 1222232
Q ss_pred EEEEeCCCCCeEEccccCcccceEEEcCCCCCCeEEEEEEEEcCCCCCCCCcccceEEecCCCCCCC---CCCCcEEEee
Q psy7040 260 VDKMDEATGRWTPAGETEGPVTGLEVEGLIPNHKYKFRVRAVNKQGKSEPLTTTASIEAKNPFNQPG---KPGTPEIKDF 336 (716)
Q Consensus 260 v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p~---~p~~~~~~~~ 336 (716)
+. ..+ ... ......+.|.++...+.+.|+|.|.|..|....+. .+.+.....+|. .+.+. ...
T Consensus 377 W~--k~g----~~~---~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~---~l~v~~~~~~p~i~~~~~~~--~v~ 442 (816)
T 3dmk_A 377 WM--KDG----KAI---GHSESVLRIESVKKEDKGMYQCFVRNDRESAEASA---ELKLGGRFDPPVIRQAFQEE--TME 442 (816)
T ss_dssp EE--ETT----EEC---SCCSSEEEESSCCGGGCEEEEEEEECSSCEEEECC---EEECCCSSCCCEEEEECCCE--EEC
T ss_pred EE--ECC----EEC---CCCCCEEEEcCCCHHHCEEEEEEEECCCCcEEEEE---EEEEccccCCCceEecCcce--EEc
Confidence 22 221 111 12346899999999999999999999877432222 122211111111 01111 122
Q ss_pred eCCeEEEEecCCCCCCCccceEEEEEEeecC-----CCceEEEeeec---CCCCeEEecCCCCCCeEEEEEEEEeCCCCC
Q psy7040 337 DTDFVELAWTPPEQNGGSPIVGYIIEKKEKY-----SPIWEKCAQTE---GDTPKGKVLDLIEGNQYEFRVLAVNKGGPG 408 (716)
Q Consensus 337 ~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~-----~~~~~~~~~~~---~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~ 408 (716)
.+..+.|.|..... +.. .+.|...+ ........... .....+.|.++...+.+.|+|.|.|..|..
T Consensus 443 ~G~~v~L~C~~~g~----p~p--~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~ 516 (816)
T 3dmk_A 443 PGPSVFLKCVAGGN----PTP--EISWELDGKKIANNDRYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVA 516 (816)
T ss_dssp SSSCEEEEEEEECS----SCC--EEEEEETTEECCSCTTEEEEEEECTTSCEEEEEEESSCCTTTCEEEEEEEEETTEEE
T ss_pred CCCCEEEEEEEecC----CCC--EEEEEECCEECCCCCCcccccEEecCCCcEEEEEEeeccccCCEEEEEEEEECCCeE
Confidence 34566777754211 111 12222221 01111111001 112358899999999999999999998754
Q ss_pred CCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECC
Q psy7040 409 EPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFD 488 (716)
Q Consensus 409 ~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 488 (716)
..+. ...+ ..+|.+. ......+..|+.+.|.|.+.+.|.+.+.|++++..+....+..+... ..|.|.+
T Consensus 517 ~~~~---~l~V---~~~p~~~--~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~~~~l~~~~~~~~~~~---~~l~i~~ 585 (816)
T 3dmk_A 517 EHSA---KLNV---YGLPYIR--QMEKKAIVAGETLIVTCPVAGYPIDSIVWERDNRALPINRKQKVFPN---GTLIIEN 585 (816)
T ss_dssp EEEE---EEEE---CSSCEEC--CCCCEEEETTCCEEEECCEECSSEEEEEEEETTEESCCSTTEEECTT---SEEEESS
T ss_pred EEEE---EEEE---ecCCeeE--ccCCeEEecCCeEEEEEEecCCCCCEEEEEECCeEcccCCceEEecC---CeEEEEe
Confidence 3221 1111 1244332 23456788999999999999999999999999998876666655432 3799999
Q ss_pred CC-CCCceeEEEEEEcCCCcee-eEEEEEEEEEEEEEeCCC---C-CCCCcee--eEEEEEEecCCC-ceeeeEEEccce
Q psy7040 489 SK-RGDSGIYTLAVKNSWGTDK-GTAKVTVLGCSLKWNPPE---D-DGGAPIE--YYMVEKMETDTG-KVLIKWIRTNDK 559 (716)
Q Consensus 489 l~-~~~~~~y~~~a~n~~g~~~-~s~~~~v~~v~l~W~~p~---~-~~~~~i~--~y~v~~~~~~~~-~~~~~w~~~~~~ 559 (716)
+. ..|.|.|+|.|.|..|... ....+.+. -.+.. . ....... .-.+.+.-...+ .+.+.|++.+..
T Consensus 586 v~~~~d~G~Y~C~a~n~~g~~~~~~~~v~v~-----~~p~~~~~~~~~~~~~~G~~v~L~C~~~~~~~~~~i~W~~~g~~ 660 (816)
T 3dmk_A 586 VERNSDQATYTCVAKNQEGYSARGSLEVQVM-----VLPRIIPFAFEEGPAQVGQYLTLHCSVPGGDLPLNIDWTLDGQA 660 (816)
T ss_dssp CCHHHHCEEEEEEEEESSSCEEEEEEEEEEE-----CCCCCBCCCCCSSCEESSCEEEEEEBCCCSSSCCEEEEEETTBC
T ss_pred cCccccCEEEEEEEEECCCceeeeeEEEEEe-----cCCccccccccccccCCCCeEEEEEEEeCCCCCCEEEEEECCeE
Confidence 98 6899999999999998643 23333333 11100 0 0000011 112222221122 235899988765
Q ss_pred eeeec------cccceeEEEEcCCCCCCeEEEEEEEEcCCCCCccceeeeccCCCCC---CccceeeccceeEEEEEEee
Q psy7040 560 RVTID------NVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTDKPSA---PEGPIQWLLTLTDVTWEISN 630 (716)
Q Consensus 560 ~~~~~------~~~~~~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~~~~v~~~p~~---~~~~~~~~~~~v~l~w~i~~ 630 (716)
..... .......+.|.++...+.+.|+|.|.|..|....+..+.|..+|.. |.......+..+.
T Consensus 661 l~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P~~~~~~~~~~v~~G~~v~------- 733 (816)
T 3dmk_A 661 ISEDLGITTSRVGRRGSVLTIEAVEASHAGNFTCHARNLAGHQQFTTPLNVYVPPRWILEPTDKAFAQGSDAK------- 733 (816)
T ss_dssp CCGGGTCEEEEETTTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECEEEEEEEEECCCCEEEETTCCEE-------
T ss_pred cCCCCCeeEEEcCCCeeEEEEccCChhhCEEEEEEEEeCCccEEEEEEEEEEeCCceeeecccceecCCCcEE-------
Confidence 42111 1123467999999999999999999999998777766666555531 1101111233333
Q ss_pred EEEEeeeeccCcee----eEEEEeCCeEeeec---------ccceeeEEEEccCCCCCcEEEEEEEEcCCCCceeeEEEE
Q psy7040 631 YLQELHSSLMPISL----ESQYLMNDKRVTID---------NVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVV 697 (716)
Q Consensus 631 y~v~~~~~~~~~~~----~~~W~~~~~~~~~~---------~~~~~~~~~i~~l~~~~~y~y~~~a~n~~G~~~~s~~l~ 697 (716)
|.|.+.| .+.|++++..+... .......|.|.++...|+|.|+|.|.|..|.+..+..+.
T Consensus 734 -------l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~v~~~ 806 (816)
T 3dmk_A 734 -------VECKADGFPKPQVTWKKAVGDTPGEYKDLKKSDNIRVEEGTLHVDNIQKTNEGYYLCEAINGIGSGLSAVIMI 806 (816)
T ss_dssp -------EECEEEEESCCEEECCEECSSSTTCCBCCCCBTTEEEETTEEEECSCCGGGCEEEEEEEECSSSSCEEEEEEE
T ss_pred -------EEEEEecCCCCeEEEEecCCCCCccccccccCCCEEecCCEEEECcCChhhCeEEEEEEEeCCCCCcEEEEEE
Confidence 6677776 89999976543211 011225799999999999999999999999999888776
Q ss_pred EecCC
Q psy7040 698 VTDKP 702 (716)
Q Consensus 698 v~~~p 702 (716)
....+
T Consensus 807 ~~~~~ 811 (816)
T 3dmk_A 807 SVQAH 811 (816)
T ss_dssp EEEC-
T ss_pred Eeecc
Confidence 65433
No 15
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.96 E-value=3.4e-26 Score=249.88 Aligned_cols=463 Identities=13% Similarity=0.108 Sum_probs=292.9
Q ss_pred ccEEEEeccccCcceEEEEEEEeCC-CCceeEEEEEEecCCCCCCCCe--EEeEEeCCeEEEEEECCCCCCCCccceEEE
Q psy7040 184 NTKLGVRMAQRADAGFYTVTAENIN-GKDSVEVEVIVLDKPSPPGGPL--KVSNVHAEGVTLDWKVPDDDGGQPIEKYVV 260 (716)
Q Consensus 184 ~~~l~i~~l~~~~~g~y~c~a~n~~-g~~~~~~~~~v~~~p~~p~~~~--~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v 260 (716)
+.+|.|.+++..|+|.|+|.+.|.. +.....+.|.|..++.+|.... ......++.+.|.|.... +...+.+
T Consensus 70 ~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~v~~g~~v~l~C~~~~-----p~~~v~W 144 (642)
T 1e07_A 70 NASLLIQNIIQNDTGFYTLHVIKSDLVNEEATGQFRVYPELPKPSISSNNSKPVEDKDAVAFTCEPET-----QDATYLW 144 (642)
T ss_pred CCcEEECCCCcccCcEEEEEEEcCCCeEEEEEEEEEecccCCCCcEEccCceeEecCCcEEEEEECCC-----CCeeEEE
Confidence 5689999999999999999999864 4446777788877665554200 112345677999999643 2223333
Q ss_pred EEEe--CCCCCeEEccccCcccceEEEcCCCCCCeEEEEEEEEcCCCCCCCCcccceEEecCCCCCC-CCCCCcEEEeee
Q psy7040 261 DKMD--EATGRWTPAGETEGPVTGLEVEGLIPNHKYKFRVRAVNKQGKSEPLTTTASIEAKNPFNQP-GKPGTPEIKDFD 337 (716)
Q Consensus 261 ~~~~--~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p-~~p~~~~~~~~~ 337 (716)
.... ......... ......+.|.++...+.+.|+|.|.|..|... +... .+.+......| ..|.+.. ...
T Consensus 145 ~~~g~~l~~~~~~~~---~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~-s~~~-~l~V~~~p~~~~~~~~~~~--~~~ 217 (642)
T 1e07_A 145 WVNNQSLPVSPRLQL---SNGNRTLTLFNVTRNDTASYKCETQNPVSARR-SDSV-ILNVLYGPDAPTISPLNTS--YRS 217 (642)
T ss_pred EECCeECCCCCceEE---cCCCCEEEEeCCCcccCeeEEEEEecCCCCcc-cceE-EEEEEeCCCCcEEecCCcc--ccc
Confidence 2211 111111111 12246899999999999999999999877532 1111 12222111111 1122222 234
Q ss_pred CCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCce
Q psy7040 338 TDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPH 417 (716)
Q Consensus 338 ~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~ 417 (716)
+..+.|.|..... +.. .+.|...+ . . -.....+.|.++...+.+.|+|.|.|..|....+... .+
T Consensus 218 G~~~~l~C~~~g~----p~~--~i~W~~~g-~---~----i~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~-~v 282 (642)
T 1e07_A 218 GENLNLSCHAASN----PPA--QYSWFVNG-T---F----QQSTQELFIPNITVNNSGSYTCQAHNSDTGLNRTTVT-TI 282 (642)
T ss_pred CCEEEEEEEcCCC----CCc--EEEEEECC-e---E----cccCCceEEecccccCCeEEEEEEEeCCCceEEeeeE-EE
Confidence 6778888887211 222 23333222 0 0 0234568899999999999999999998765433221 22
Q ss_pred EeecCCCCCcccccccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeE
Q psy7040 418 IARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIY 497 (716)
Q Consensus 418 ~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y 497 (716)
.....+.+|.+.. .....+..|+.+.|.|.+.+.| +.+.|++++..+....++.+... ...|.|.++...|.|.|
T Consensus 283 ~v~~~~~~p~i~~--~~~~~~~~g~~v~l~C~~~~~p-~~v~W~~~g~~l~~~~~~~~~~~--~~~L~i~~~~~~d~G~Y 357 (642)
T 1e07_A 283 TVYAEPPKPFITS--NNSNPVEDEDAVALTCEPEIQN-TTYLWWVNNQSLPVSPRLQLSND--NRTLTLLSVTRNDVGPY 357 (642)
T ss_pred EEEccCCCCEEEc--CCceeEecCCcEEEEEECCCCC-ccEEEEECCccCCCcCCEEEeCC--CCEEEEeccCcccCeeE
Confidence 2223333444432 2334566788899999999887 69999999998876666665443 45899999999999999
Q ss_pred EEEEEcCCCce-eeEEEEEEEE----EEEEEeC-CCCCCCCceeeEEEEEEecCCCceeeeEEEccceeeeeccccceeE
Q psy7040 498 TLAVKNSWGTD-KGTAKVTVLG----CSLKWNP-PEDDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDNVDYFTK 571 (716)
Q Consensus 498 ~~~a~n~~g~~-~~s~~~~v~~----v~l~W~~-p~~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 571 (716)
+|.|.|..|.. +....+.+.. ..+.-.. ....+......|.+. +.+.+.+.|++.+...... ..
T Consensus 358 ~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~----g~p~~~i~W~~~g~~~~~~------~~ 427 (642)
T 1e07_A 358 ECGIQNELSVDHSDPVILNVLYGPDDPTISPSYTYYRPGVNLSLSCHAA----SNPPAQYSWLIDGNIQQHT------QE 427 (642)
T ss_pred EEEEeCCCCCcceeeEEEEEEcCCCCCeecCCceEecCCCcEEEEEEcC----ccCCCeEEEEECCEEcCCC------ce
Confidence 99999999864 3345555440 1110000 001122222333332 3344559999988655433 78
Q ss_pred EEEcCCCCCCeEEEEEEEEcCCCCCccceeee--ccCCCCCCccceee------ccceeEEEEEEeeEEEEeeeeccCce
Q psy7040 572 ITIRPLQRSDTAQYTVTATNSQGKDQVFIEVV--VTDKPSAPEGPIQW------LLTLTDVTWEISNYLQELHSSLMPIS 643 (716)
Q Consensus 572 ~~i~~L~~~~~y~~~v~a~n~~G~~~~s~~~~--v~~~p~~~~~~~~~------~~~~v~l~w~i~~y~v~~~~~~~~~~ 643 (716)
+.|.++...+.+.|+|.|.|..|....+..+. +..++..|. +... .+..+. |.|.+.
T Consensus 428 L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~~~p~-i~~~~~~~v~~g~~v~--------------l~C~~~ 492 (642)
T 1e07_A 428 LFISNITEKNSGLYTCQANNSASGHSRTTVKTITVSAELPKPS-ISSNNSKPVEDKDAVA--------------FTCEPE 492 (642)
T ss_pred EEEccCChhhCeEEEEEEEcCCCCCcccceEEEEEeccCCCce-EecCCceeecCCCeEE--------------EEEECC
Confidence 99999999999999999999998776664444 444444443 3221 233333 445544
Q ss_pred e---eEEEEeCCeEeeecc----cceeeEEEEccCCCCCcEEEEEEEEcCCCCce-eeEEEEEecCCC
Q psy7040 644 L---ESQYLMNDKRVTIDN----VDYFTKITIRPLQRSDTAQYTVTATNSQGKDQ-VFIEVVVTDKPS 703 (716)
Q Consensus 644 ~---~~~W~~~~~~~~~~~----~~~~~~~~i~~l~~~~~y~y~~~a~n~~G~~~-~s~~l~v~~~p~ 703 (716)
+ .+.|+++|..+.... ......|.|.++...|+|.|+|.|.|..|... .+..|.|..+|.
T Consensus 493 ~~~~~i~W~~~g~~l~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~ 560 (642)
T 1e07_A 493 AQNTTYLWWVNGQSLPVSPRLQLSNGNRTLTLFNVTRNDARAYVCGIQNSVSANRSDPVTLDVLYGPD 560 (642)
T ss_pred CCCcEEEEEECCEeCCCCCcEEEcCCCcEEEEeecChhcCceEEEEeEcCCCCccCCCEEEEEEeCCC
Confidence 4 899999999886541 12236899999999999999999999999864 468899987654
No 16
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.96 E-value=2.9e-26 Score=245.62 Aligned_cols=462 Identities=15% Similarity=0.184 Sum_probs=291.9
Q ss_pred CeEEecCCCCCcEEEEEEEEEecCccCCCccccceEEe-cCCCCc---------ccccccccceecccCCC--------C
Q psy7040 110 PEMDVTGLTPGHEYKFRVKALNKEGESEPLETFSSIIA-RDPYSK---------YTSVSSLDSHKRSNQPC--------G 171 (716)
Q Consensus 110 ~~~~i~~L~~~~~y~~~v~a~~~~g~~~~s~~~~~~~~-~~p~~~---------~~~~~~~~~~~~~~~p~--------G 171 (716)
..|.|.++...+.+.|+|.|.|..|....+.. ..+.. ..|+.. .......+.|.+.+.|+ |
T Consensus 61 ~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~-l~v~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~k~g 139 (570)
T 3b43_A 61 ASLVINKVDHSDVGEYTCKAENSVGAVASSAV-LVIKERKLPPSFARKLKDVHETLGFPVAFECRINGSEPLQVSWYKDG 139 (570)
T ss_dssp EEEEESSCCGGGCEEEEEEEEETTEEEEEEEE-EEECCCCCCCEESSCCCCEEEETTSCEEEEEEEESSSSCEEEEEETT
T ss_pred EEEEEccCChhhCEEEEEEEEeCCceEEEEEE-EEECCCCCCCcccccCCCeEecCCCeEEEEEEEccCCCCEEEEEECC
Confidence 57999999999999999999999885433221 11111 011111 11223346688887766 3
Q ss_pred ----CCceEEEEecCCccEEEEeccccCcceEEEEEEEeCCCCceeEEEEEEecCCCCCC---CCeEEeEEeCCeEEEEE
Q psy7040 172 ----SGMVRKVQHLDYNTKLGVRMAQRADAGFYTVTAENINGKDSVEVEVIVLDKPSPPG---GPLKVSNVHAEGVTLDW 244 (716)
Q Consensus 172 ----~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~~p~---~~~~~~~~~~~~~~l~W 244 (716)
...++..........|.|.++...|+|.|+|.|.|..|.....+.+.+.....+|. .|..+....+..+.|.|
T Consensus 140 ~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~pp~~~~~p~~~~v~~G~~~~l~C 219 (570)
T 3b43_A 140 ELLKDDANLQTSFIHNVATLQILQTDQSHVGQYNCSASNPLGTASSSAKLTLSEHEVPPFFDLKPVSVDLALGESGTFKC 219 (570)
T ss_dssp EECCCCSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCCCCEEEECCCCBCCBSBSCEEEEE
T ss_pred EECcCCCCEEEEEECCEEEEEECcCChHHCEEEEEEEEeCCcEEEEEEEEEEcCCCCCCccccCCceeEecCCCeEEEEE
Confidence 23344444455668899999999999999999999999988888888876544442 11122334578899999
Q ss_pred ECCCCCCCCccceEEEEEEe---CCCCCeEEccccCcccceEEEcCCCCCCeEEEEEEEEcCCCCCCCCcccceEEecCC
Q psy7040 245 KVPDDDGGQPIEKYVVDKMD---EATGRWTPAGETEGPVTGLEVEGLIPNHKYKFRVRAVNKQGKSEPLTTTASIEAKNP 321 (716)
Q Consensus 245 ~~p~~~~~~~~~~y~v~~~~---~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~~~~~~~~~~~~~ 321 (716)
..... +...+.+.... .......... ......+.|.++...+.+.|+|.|.|..|....+. .+.+.
T Consensus 220 ~~~g~----p~p~i~W~k~g~~i~~~~~~~~~~--~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~---~l~V~-- 288 (570)
T 3b43_A 220 HVTGT----APIKITWAKDNREIRPGGNYKMTL--VENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSA---QLGVQ-- 288 (570)
T ss_dssp EEESS----SCCEEEEEETTEECCTTSSEEEEE--ETTEEEEEESSBCGGGCEEEEEEEEETTEEEEEEE---EECCB--
T ss_pred EEEEC----CCCEEEEEECCEECcCCCcEEEEE--ECCEEEEEEcccCcccCEEEEEEEECCCCcEEEEE---EEEee--
Confidence 86322 22223322210 0111111111 12346899999999999999999999887542111 12221
Q ss_pred CCCCC---CCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecC-----CCceEEEeeecCCCCeEEecCCCCCC
Q psy7040 322 FNQPG---KPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKY-----SPIWEKCAQTEGDTPKGKVLDLIEGN 393 (716)
Q Consensus 322 ~~~p~---~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~-----~~~~~~~~~~~~~~~~~~i~~l~~~~ 393 (716)
.+|. .+.... ....+..+.|.|..... +.. .+.|...+ +..... ........+.|.++...+
T Consensus 289 -~~p~~~~~~~~~~-~v~~g~~~~l~C~~~g~----P~p--~v~W~k~~~~l~~~~~~~~--~~~~~~~~L~i~~v~~~D 358 (570)
T 3b43_A 289 -EPPRFIKKLEPSR-IVKQDEHTRYECKIGGS----PEI--KVLWYKDETEIQESSKFRM--SFVESVAVLEMYNLSVED 358 (570)
T ss_dssp -CCCEEEECCCSBC-CEESSCEEEEEEEEESS----SSC--EEEEEETTEECCCSSSEEE--EEETTEEEEEEESCCGGG
T ss_pred -cCCcccccCCCcc-EEcCCCcEEEEEEEeeC----CCC--EEEEeECCEECCCCCcEEE--EEECCEEEEEECCCCccc
Confidence 1111 011101 11234556666665211 111 12222221 111111 111233568899999999
Q ss_pred eEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcE
Q psy7040 394 QYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRF 473 (716)
Q Consensus 394 ~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~ 473 (716)
.+.|+|.|.|..|....+. ......+|.+. ..+..+.+..|..+.|.|.+.+.|.+.+.|++++..+..+.++
T Consensus 359 ~G~Y~C~a~N~~g~~~~~~------~l~V~~~P~~~-~~~~~~~~~~G~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~ 431 (570)
T 3b43_A 359 SGDYTCEAHNAAGSASSST------SLKVKEPPVFR-KKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKY 431 (570)
T ss_dssp CEEEEEEEEBTTBCCEEEE------EECEECCCEEC-SCCCCEEECTTCCEEEEEEEESSSSCCCEEEETTEECCSSSSE
T ss_pred CEEEEEEEEeCCCEEEEEE------EEEecCCCeee-cCCCceeecCCCEEEEEEEEecCCCCEEEEEECCEECcCCCCE
Confidence 9999999999988643221 11122355544 2345677889999999999999999999999999999888888
Q ss_pred EEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEEEEEEE---EEEEEEeCC-CCCCCCceeeEEEEEEecCCCce
Q psy7040 474 KIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVL---GCSLKWNPP-EDDGGAPIEYYMVEKMETDTGKV 549 (716)
Q Consensus 474 ~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v~---~v~l~W~~p-~~~~~~~i~~y~v~~~~~~~~~~ 549 (716)
.+...+....|.|.++...|.|.|+|.|.|..|.......+.+. .+....... ...+......|.+. +.+.+
T Consensus 432 ~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~v~~~P~~~~~~~~~~~~~g~~~~l~c~~~----g~p~~ 507 (570)
T 3b43_A 432 KIMSENFLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLKAPPRFVKKLSDISTVVGEEVQLQATIE----GAEPI 507 (570)
T ss_dssp EEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECCCCEEEECCCCBCCBTTCCEEEEEEEE----SCSSC
T ss_pred EEEEcCCEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEeccCCcccccCCCceecCCCeEEEEEEEe----cCCCC
Confidence 88887777899999999999999999999999998887777766 111111110 01122222334333 33445
Q ss_pred eeeEEEccceeee-e-----ccccceeEEEEcCCCCCCeEEEEEEEEcCCCCCccceeeec
Q psy7040 550 LIKWIRTNDKRVT-I-----DNVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVV 604 (716)
Q Consensus 550 ~~~w~~~~~~~~~-~-----~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~~~~v 604 (716)
.+.|++.+..... . ........+.|.++.+.+.+.|+|.|.|..|....+..+.|
T Consensus 508 ~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~a~L~V 568 (570)
T 3b43_A 508 SVAWFKDKGEIVRESDNIWISYSENIATLQFSRAEPANAGKYTCQIKNEAGTQECFATLSV 568 (570)
T ss_dssp CCEEEETTEECCCCTTTEEECCCSSEEEEEESSCCTTCCEEEEEEEECSSCEEEEEEEECC
T ss_pred EEEEEeCCeEeccCCCeEEEEECCCEEEEEECcCCHHHCEEEEEEEEECCcEEEEEEEEEE
Confidence 5999998633211 1 11223468999999999999999999999998877776654
No 17
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.96 E-value=9.7e-27 Score=261.69 Aligned_cols=546 Identities=16% Similarity=0.130 Sum_probs=330.9
Q ss_pred CeEEecCCCCCc------EEEEEEEEEecCccCCCccccceEEecCCCCc-------ccccccccceecccCC-------
Q psy7040 110 PEMDVTGLTPGH------EYKFRVKALNKEGESEPLETFSSIIARDPYSK-------YTSVSSLDSHKRSNQP------- 169 (716)
Q Consensus 110 ~~~~i~~L~~~~------~y~~~v~a~~~~g~~~~s~~~~~~~~~~p~~~-------~~~~~~~~~~~~~~~p------- 169 (716)
.++.|.++...+ .+.|+|.|.|..|..............+.+.. .......+.|.+...+
T Consensus 94 g~l~i~~~~~~~~~~~~d~G~Y~C~a~n~~G~~~S~~~~v~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v 173 (816)
T 3dmk_A 94 GKLVFPPFRAEDYRQEVHAQVYACLARNQFGSIISRDVHVRAVVAQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEVV 173 (816)
T ss_dssp TEEEECCCCGGGCCHHHHEEEEEEEEEETTEEEEEEEEEEEEECCCCCCCBCCCEEEETTSCEEECCBCCHHHHTTEEEE
T ss_pred CcEEEcCCChHHccccccceEEEEEEecCcceEEccceEEEEEEccccEEEEecceEecCceEEEEECCCccccccEEEE
Confidence 578899988776 89999999999996322222221111111111 1122223446543221
Q ss_pred ----CC---------CCceEEEEecCCccEEEEeccccCcc-eEEEEEEEeCCCCce----eEEEEEEecCCC--CCCCC
Q psy7040 170 ----CG---------SGMVRKVQHLDYNTKLGVRMAQRADA-GFYTVTAENINGKDS----VEVEVIVLDKPS--PPGGP 229 (716)
Q Consensus 170 ----~G---------~~~~~~~~~~~~~~~l~i~~l~~~~~-g~y~c~a~n~~g~~~----~~~~~~v~~~p~--~p~~~ 229 (716)
.+ ..+|+.+. .+++|.|.++++.|+ |.|+|.|.|..+... ....+.+..+.. +|...
T Consensus 174 ~W~~~~~~~~~~~~~~~~r~~~~---~~g~L~I~~v~~~D~~g~Y~C~~~~~~~~~~~~s~~~~~l~v~~~~~~~~P~i~ 250 (816)
T 3dmk_A 174 SWHTDEEENYFPGAEYDGKYLVL---PSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSAVPKVV 250 (816)
T ss_dssp EEEETTSCEECBSSCBTTTEEEC---TTSCEEESSCCGGGSSCEEEEEEEETTTCCEEECSBCEEEEEECCCSCCCCBCC
T ss_pred EEEecCceEeccccCCCceEEEe---cCceEEEecCChhhccceeEEEEeeeeeeeeeecccccceEEeCCCCCCCCccc
Confidence 11 13344443 356899999999999 999999998765422 223555554322 22210
Q ss_pred -----eEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCCCCCeEEcc---ccCcccceEEEcCCCCCCeEEEEEEEE
Q psy7040 230 -----LKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEATGRWTPAG---ETEGPVTGLEVEGLIPNHKYKFRVRAV 301 (716)
Q Consensus 230 -----~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~---~~~~~~~~~~i~~L~p~~~y~~~v~a~ 301 (716)
.......+..+.|.|... |.|...+.+.....+........ ........+.|.++...+.+.|+|.|.
T Consensus 251 ~~~~~~~~~v~~g~~v~L~C~~~----g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 326 (816)
T 3dmk_A 251 SLAKFDMKTYSGSSTMALLCPAQ----GYPVPVFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVN 326 (816)
T ss_dssp GGGGEEEEEECTTSCEEECCCCB----CSSCCEEEEEEECTTSSCEEECCCSSSEEEETTEEEECSCCGGGCEEEEEEEE
T ss_pred cccCccceEEeCCCeEEEEEEee----ecCCCeEEEEeCCCCCccCcceecCCceEeccceEEECCCCHhHCEEEEEEEE
Confidence 123445688999999963 23334444433212111111110 001124689999999999999999999
Q ss_pred cCCCCCCCCcccceEEecCCCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCC
Q psy7040 302 NKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDT 381 (716)
Q Consensus 302 n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~ 381 (716)
|..|..... ..+.+..+......|. ......+..+.|.|..... +.. .+.|...+ . ......
T Consensus 327 n~~g~~~~~---~~l~V~~~~~~~~~~~--~~~v~~G~~v~l~C~~~g~----p~~--~v~W~k~g----~---~~~~~~ 388 (816)
T 3dmk_A 327 NSVGGESVE---TVLTVTAPLSAKIDPP--TQTVDFGRPAVFTCQYTGN----PIK--TVSWMKDG----K---AIGHSE 388 (816)
T ss_dssp CSSCEEEEE---EEEEECEEEEEEEESS--EEECCTTSCEEEEEEEEEE----CCC--EEEEEETT----E---ECSCCS
T ss_pred cCCCceEEE---EEEEEcCCCceeeCCC--ceEecCCCCEEEEEEEecc----CCC--EEEEEECC----E---ECCCCC
Confidence 987753211 1122221100001111 1222345567777765211 111 23333222 0 112345
Q ss_pred CeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccCCCeEEEE
Q psy7040 382 PKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWL 461 (716)
Q Consensus 382 ~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~ 461 (716)
..+.|.++...+.+.|+|.|.|..|....+ ..........+|.+. .......+..|..+.|.|.+.+.|.+.+.|+
T Consensus 389 ~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~---~~l~v~~~~~~p~i~-~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~ 464 (816)
T 3dmk_A 389 SVLRIESVKKEDKGMYQCFVRNDRESAEAS---AELKLGGRFDPPVIR-QAFQEETMEPGPSVFLKCVAGGNPTPEISWE 464 (816)
T ss_dssp SEEEESSCCGGGCEEEEEEEECSSCEEEEC---CEEECCCSSCCCEEE-EECCCEEECSSSCEEEEEEEECSSCCEEEEE
T ss_pred CEEEEcCCCHHHCEEEEEEEECCCCcEEEE---EEEEEccccCCCceE-ecCcceEEcCCCCEEEEEEEecCCCCEEEEE
Confidence 679999999999999999999987754322 122222223455544 2344567889999999999999999999999
Q ss_pred eCCeEeccCCcEEEEe----C-CCeEEEEECCCCCCCceeEEEEEEcCCCceeeEEEEEEEEEEEEEeCCC----CCCCC
Q psy7040 462 CNDITIISKDRFKIVN----D-DKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVLGCSLKWNPPE----DDGGA 532 (716)
Q Consensus 462 ~~~~~~~~~~~~~~~~----~-~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v~~v~l~W~~p~----~~~~~ 532 (716)
+++..+....++.... . .....|.|.++...|.|.|+|.|.|..|....+..+.+..... ...+. ..+..
T Consensus 465 ~~g~~l~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~-~~~~~~~~v~~G~~ 543 (816)
T 3dmk_A 465 LDGKKIANNDRYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNVYGLPY-IRQMEKKAIVAGET 543 (816)
T ss_dssp ETTEECCSCTTEEEEEEECTTSCEEEEEEESSCCTTTCEEEEEEEEETTEEEEEEEEEEECSSCE-ECCCCCEEEETTCC
T ss_pred ECCEECCCCCCcccccEEecCCCcEEEEEEeeccccCCEEEEEEEEECCCeEEEEEEEEEecCCe-eEccCCeEEecCCe
Confidence 9999987776665422 1 2235699999999999999999999999888887777661100 00110 11122
Q ss_pred ceeeEEEEEEecCCCceeeeEEEccceeeeec--cccceeEEEEcCCC-CCCeEEEEEEEEcCCCCCcc-ceeeeccCCC
Q psy7040 533 PIEYYMVEKMETDTGKVLIKWIRTNDKRVTID--NVDYFTKITIRPLQ-RSDTAQYTVTATNSQGKDQV-FIEVVVTDKP 608 (716)
Q Consensus 533 ~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~--~~~~~~~~~i~~L~-~~~~y~~~v~a~n~~G~~~~-s~~~~v~~~p 608 (716)
....|.+. ..+.+.+.|++.+....... .......+.|.++. ..+.+.|+|.|.|..|.... ...+.+..+|
T Consensus 544 v~l~C~~~----g~p~~~i~W~k~~~~l~~~~~~~~~~~~~l~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~~v~v~~~p 619 (816)
T 3dmk_A 544 LIVTCPVA----GYPIDSIVWERDNRALPINRKQKVFPNGTLIIENVERNSDQATYTCVAKNQEGYSARGSLEVQVMVLP 619 (816)
T ss_dssp EEEECCEE----CSSEEEEEEEETTEESCCSTTEEECTTSEEEESSCCHHHHCEEEEEEEEESSSCEEEEEEEEEEECCC
T ss_pred EEEEEEec----CCCCCEEEEEECCeEcccCCceEEecCCeEEEEecCccccCEEEEEEEEECCCceeeeeEEEEEecCC
Confidence 22233332 23344599998876543211 11123678999998 68999999999999885432 2233344444
Q ss_pred CCCc----cceeeccceeEEEEEEeeEEEEeeeeccCcee-----eEEEEeCCeEeeec-------ccceeeEEEEccCC
Q psy7040 609 SAPE----GPIQWLLTLTDVTWEISNYLQELHSSLMPISL-----ESQYLMNDKRVTID-------NVDYFTKITIRPLQ 672 (716)
Q Consensus 609 ~~~~----~~~~~~~~~v~l~w~i~~y~v~~~~~~~~~~~-----~~~W~~~~~~~~~~-------~~~~~~~~~i~~l~ 672 (716)
.... ......+..+. |.|.+.+ .+.|+++|+.+..+ .......|.|.++.
T Consensus 620 ~~~~~~~~~~~~~~G~~v~--------------L~C~~~~~~~~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~L~i~~v~ 685 (816)
T 3dmk_A 620 RIIPFAFEEGPAQVGQYLT--------------LHCSVPGGDLPLNIDWTLDGQAISEDLGITTSRVGRRGSVLTIEAVE 685 (816)
T ss_dssp CCBCCCCCSSCEESSCEEE--------------EEEBCCCSSSCCEEEEEETTBCCCGGGTCEEEEETTTEEEEEEESCC
T ss_pred ccccccccccccCCCCeEE--------------EEEEEeCCCCCCEEEEEECCeEcCCCCCeeEEEcCCCeeEEEEccCC
Confidence 3211 01122233444 5666553 79999999887544 11234689999999
Q ss_pred CCCcEEEEEEEEcCCCCceeeEEEEEecCCC
Q psy7040 673 RSDTAQYTVTATNSQGKDQVFIEVVVTDKPS 703 (716)
Q Consensus 673 ~~~~y~y~~~a~n~~G~~~~s~~l~v~~~p~ 703 (716)
.+|+|.|+|.|.|..|....+..|.|..+|.
T Consensus 686 ~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P~ 716 (816)
T 3dmk_A 686 ASHAGNFTCHARNLAGHQQFTTPLNVYVPPR 716 (816)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEECEEEEEE
T ss_pred hhhCEEEEEEEEeCCccEEEEEEEEEEeCCc
Confidence 9999999999999999999999999988765
No 18
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=99.96 E-value=2.1e-26 Score=224.34 Aligned_cols=261 Identities=23% Similarity=0.404 Sum_probs=200.6
Q ss_pred CCCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCC-CCcEEEecc-cCCCeEEecCCCCCcEEEEEEEEEec
Q psy7040 55 LDPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPE-TGVWIPVGK-TREPEMDVTGLTPGHEYKFRVKALNK 132 (716)
Q Consensus 55 ~~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~-~~~~~~~~~-~~~~~~~i~~L~~~~~y~~~v~a~~~ 132 (716)
+.||.+|.+...+.+++.|+|++|. +++.+|+|+|+..+ .+.|..... ...+++.|.+|.|++.|.|+|+|.|.
T Consensus 21 p~~P~~l~~~~~~~~sv~l~W~~p~----~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~ 96 (290)
T 3r8q_A 21 IPAPTDLKFTQVTPTSLSAQWTPPN----VQLTGYRVRVTPKEKTGPMKEINLAPDSSSVVVSGLMVATKYEVSVYALKD 96 (290)
T ss_dssp CCCCEEEEEEEECSSCEEEEEECCS----SCCCEEEEEEEESSSSSCCEEEEECTTCCEEEECSCCSSCEEEEEEEEEET
T ss_pred CCCCCceEEEECCCCEEEEEEeCCC----CCeeEEEEEEEeCCCCCceEEEEcCCCccEEEeCCCCCCCEEEEEEEEEeC
Confidence 3444557778999999999999973 35999999998765 345555443 33589999999999999999999999
Q ss_pred CccCCCccccceEEecCCCCcccccccccceecccCCCCCCceEEEEecCCccEEEEeccccCcceEEEEEEEeCCCCce
Q psy7040 133 EGESEPLETFSSIIARDPYSKYTSVSSLDSHKRSNQPCGSGMVRKVQHLDYNTKLGVRMAQRADAGFYTVTAENINGKDS 212 (716)
Q Consensus 133 ~g~~~~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~G~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~ 212 (716)
.|.+.++.... .+
T Consensus 97 ~g~s~~s~~~~-~t------------------------------------------------------------------ 109 (290)
T 3r8q_A 97 TLTSRPAQGVV-TT------------------------------------------------------------------ 109 (290)
T ss_dssp TEECCCEEEEE-EC------------------------------------------------------------------
T ss_pred CCCCCCcceeE-ec------------------------------------------------------------------
Confidence 99887653211 11
Q ss_pred eEEEEEEecCCCCCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCCCCCeEEccccCcccceEEEcCCCCCC
Q psy7040 213 VEVEVIVLDKPSPPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEATGRWTPAGETEGPVTGLEVEGLIPNH 292 (716)
Q Consensus 213 ~~~~~~v~~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~ 292 (716)
...|.+|.+ +.+.....+++.|+|++|. + .+.+|.|++...+...+.... .......+.|.+|.|++
T Consensus 110 -------~~~~~~P~~-l~~~~~~~~sv~l~W~~p~---~-~~~~Y~v~~~~~~~~~~~~~~-~~~~~~~~~i~~L~p~t 176 (290)
T 3r8q_A 110 -------LENVSPPRR-ARVTDATETTITISWRTKT---E-TITGFQVDAVPANGQTPIQRT-IKPDVRSYTITGLQPGT 176 (290)
T ss_dssp -------CCCCCCCEE-EEEEEECSSCEEEEEECCS---C-CCCEEEEEEEESSSCCCEEEE-ECTTCSEEEECSCCTTC
T ss_pred -------CCCCCCCce-eEEEEcCCCeEEEEEeCCC---C-cccEEEEEEEECCCCcceEEe-cCCCccEEEECCCCCCC
Confidence 112455666 7888889999999999863 2 589999999876654433222 22457889999999999
Q ss_pred eEEEEEEEEcCCCCCCCCcccceEEecCCCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceE
Q psy7040 293 KYKFRVRAVNKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWE 372 (716)
Q Consensus 293 ~y~~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~ 372 (716)
.|.|+|.|.|..|.+.+.. +... ..|.+|.++.+...+.+++.|+|.+|.. .+.+|.|+++..+...+.
T Consensus 177 ~Y~~~V~A~n~~g~s~~~~----~~~~---t~p~~P~~l~~~~~~~~sv~l~W~~p~~----~~~~Y~v~~~~~~~~~~~ 245 (290)
T 3r8q_A 177 DYKIYLYTLNDNARSSPVV----IDAS---TAIDAPSNLRFLATTPNSLLVSWQPPRA----RITGYIIKYEKPGSPPRE 245 (290)
T ss_dssp EEEEEEEEEETTEECCCEE----EEEE---CCCCCCEEEEEEEEETTEEEEEEECCSS----CCCEEEEEEECTTSCCEE
T ss_pred EEEEEEEEEeCCcccCCEE----EEec---CCCCCCCccEEEeeCCCEEEEEEeCCCC----cccEEEEEEEeCCCCcce
Confidence 9999999999988765532 2222 3477888999999999999999999652 689999999987766555
Q ss_pred EEeeecCCCCeEEecCCCCCCeEEEEEEEEeCCCCCCC
Q psy7040 373 KCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEP 410 (716)
Q Consensus 373 ~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~ 410 (716)
..........++.+.+|.+++.|.|+|+|.|..|.|.+
T Consensus 246 ~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p 283 (290)
T 3r8q_A 246 VVPRPRPGVTEATITGLEPGTEYTIYVIALKNNQKSEP 283 (290)
T ss_dssp CSSCCCTTCCEEEECSCCTTCEEEEEEEEEETTEECCC
T ss_pred eEeccCCCccEEEECCCCCCCEEEEEEEEEeCCCcCCc
Confidence 44344567889999999999999999999999998754
No 19
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.95 E-value=7e-26 Score=231.47 Aligned_cols=325 Identities=19% Similarity=0.201 Sum_probs=225.6
Q ss_pred CceEEEEecCCccEEEEeccccCcceEEEEEEEeCCCCceeEEEEEEecCCCCCCCCeEEeEEeCCeEEEEEECCCCCCC
Q psy7040 173 GMVRKVQHLDYNTKLGVRMAQRADAGFYTVTAENINGKDSVEVEVIVLDKPSPPGGPLKVSNVHAEGVTLDWKVPDDDGG 252 (716)
Q Consensus 173 ~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~ 252 (716)
..++.+........|.|.+++..|+|.|+|.|.|..|..+..+.|.|..+|.....+.......+..+.|.|....
T Consensus 51 ~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g---- 126 (389)
T 2jll_A 51 DGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIEYAPKFISNQTIYYSWEGNPINISCDVKS---- 126 (389)
T ss_dssp SSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEECCSCCEEEECTTCCEEEEECEEE----
T ss_pred CCeEEEeccCCcceEEEcccChhhCEEEEEEEEeCCCCcceEEEEEEEeCCEEecCcceEEeccCCEEEEEEEEEe----
Confidence 3566666656778999999999999999999999999999999999998876544432334456788999997522
Q ss_pred CccceEEEEEE--eCCCCC--eEEccccCcccceEEEcCCCCCCeEEEEEEEEcCCCCCCCCcccceEEecCCCCCCCCC
Q psy7040 253 QPIEKYVVDKM--DEATGR--WTPAGETEGPVTGLEVEGLIPNHKYKFRVRAVNKQGKSEPLTTTASIEAKNPFNQPGKP 328 (716)
Q Consensus 253 ~~~~~y~v~~~--~~~~~~--~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p~~p 328 (716)
.+...+.+... ...... ..... ..+....+.|.++...+.|.|+|.|.|..|..... ..+.. ...|.+|
T Consensus 127 ~p~~~i~W~~~g~~l~~~~~~~~~~~-~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~---~~l~v---~~~P~~P 199 (389)
T 2jll_A 127 NPPASIHWRRDKLVLPAKNTTNLKTY-STGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQE---YILAL---ADVPSSP 199 (389)
T ss_dssp ESCCEEEEEETTEESSCTTCTTEEEE-ECSSCEEEEECCCSTTSSEEEEEEEEETTEEEEEE---EEEEE---CCCCCCC
T ss_pred cCCCeEEEEECCccCCcccCceEEEe-ccCCEEEEEECCCChhhCEEEEEEEEcCCCcEEEE---EEEEe---cCCCCCC
Confidence 12222222221 000000 01111 11335679999999999999999999998874322 11222 2567788
Q ss_pred CCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEEeCCCCC
Q psy7040 329 GTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPG 408 (716)
Q Consensus 329 ~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~ 408 (716)
.++.+.......+.|+|.+|..+++.++.+|.|+|+..+...|.... .......+.|.+|.+++.|.|+|.|.|..|.+
T Consensus 200 ~~~~~~~~~~~~~~l~w~~p~~~~g~pi~~y~v~~~~~~~~~~~~~~-~~~~~~~~~i~~l~~~~~y~~~v~A~N~~G~~ 278 (389)
T 2jll_A 200 YGVKIIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVASEIWKIVR-SHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQG 278 (389)
T ss_dssp EEEEEEEECSSCEEEEEECCSCCTTSCEEEEEEEEEETTCSCCEEEE-CSTTCSEEEECSCCTTCEEEEEEEEEESSCBC
T ss_pred cceEEeeccCCEEEEEEeCCCCCCCcceEEEEEEEEECCCcccEEee-ccCCcceEEECCccCCCEEEEEEEEEcCCccC
Confidence 88888888889999999988777777899999999988877776543 33456789999999999999999999999998
Q ss_pred CCCCCCCceEeec-CCCCCcccccccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEEC
Q psy7040 409 EPSDPTAPHIARA-KKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVF 487 (716)
Q Consensus 409 ~~s~~~~~~~~~~-~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~ 487 (716)
.++......+... ++.+|.+ .. ..
T Consensus 279 ~~s~~~~~~t~~~~~p~~p~~------------------~~-----------------------------------~~-- 303 (389)
T 2jll_A 279 DYSKIEIFQTLPVREPSPPSI------------------HG-----------------------------------QP-- 303 (389)
T ss_dssp CCCCCEEEECCCCCCCCCCCE------------------EE-----------------------------------EE--
T ss_pred CCCcceEEEecCCCCCCCCcc------------------cc-----------------------------------cc--
Confidence 8776543332221 1111110 00 00
Q ss_pred CCCCCCceeEEEEEEcCCCceeeEEEEEEEEEEEEEeCCCCCCCCceeeEEEEEEecCCCceeeeEEEccceeeeecccc
Q psy7040 488 DSKRGDSGIYTLAVKNSWGTDKGTAKVTVLGCSLKWNPPEDDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDNVD 567 (716)
Q Consensus 488 ~l~~~~~~~y~~~a~n~~g~~~~s~~~~v~~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 567 (716)
.... ++.|+|.+|.+ +++++.+|.|+++.... ..|....... .
T Consensus 304 -~~~~-------------------------~v~l~W~~p~~-~~~~i~~Y~v~~~~~~~----~~~~~~~~~~------~ 346 (389)
T 2jll_A 304 -SSGK-------------------------SFKLSITKQDD-GGAPILEYIVKYRSKDK----EDQWLEKKVQ------G 346 (389)
T ss_dssp -ETTT-------------------------EEEEEECCCCC-CSSCCCEEEEEEEC---------CCBCCEEC------T
T ss_pred -CcCC-------------------------EEEEEEECCCC-CCCcccEEEEEEEeCCC----CcceeEeecc------C
Confidence 0001 89999998754 55679999999998655 4554322111 1
Q ss_pred ceeEEEEcCCCCCCeEEEEEEEEcCCCCCcccee
Q psy7040 568 YFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIE 601 (716)
Q Consensus 568 ~~~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~~ 601 (716)
....+.|.+|.+++.|.|+|+|.|..|.|.++..
T Consensus 347 ~~~~~~i~~L~~~t~Y~~~V~A~n~~G~s~~s~~ 380 (389)
T 2jll_A 347 NKDHIILEHLQWTMGYEVQITAANRLGYSEPTVY 380 (389)
T ss_dssp TCCEEEECSCCTTCEEEEEEEEEC-CCBCCCEEE
T ss_pred CcceEEeCCcCCCCEEEEEEEEEcCCcCCCceee
Confidence 2378999999999999999999999999988865
No 20
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=99.95 E-value=3.1e-25 Score=215.40 Aligned_cols=261 Identities=18% Similarity=0.248 Sum_probs=198.7
Q ss_pred ccCCCCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCC-CCcEEEec-ccCCCeEEecCCCCCcEEEEEEEE
Q psy7040 52 DRGLDPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPE-TGVWIPVG-KTREPEMDVTGLTPGHEYKFRVKA 129 (716)
Q Consensus 52 ~~~~~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~-~~~~~~~~-~~~~~~~~i~~L~~~~~y~~~v~a 129 (716)
..++.||..|.+..++.+++.|+|++|. .++.+|+|+|+... .+.|.... ....+++.|.+|.|++.|.|+|+|
T Consensus 12 ~~~p~~P~~l~~~~~~~~sv~l~W~~~~----~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a 87 (283)
T 1tdq_A 12 IPVIDGPTQILVRDVSDTVAFVEWTPPR----AKVDFILLKYGLVGGEGGKTTFRLQPPLSQYSVQALRPGSRYEVSISA 87 (283)
T ss_dssp CCSSCCCEEEEEEEECSSCEEEEEECCS----SCCSEEEEEEEESSSSCCCEEEEECTTCSEEEECSCCTTCEEEEEEEE
T ss_pred ccCCCCCcEEEEEecCCCeEEEEEECCC----CceeEEEEEEEEecCCCCcEEEEeCCCCCEEEecCCCCCCEEEEEEEE
Confidence 3455667778888999999999999985 35999999996543 33343322 334589999999999999999999
Q ss_pred EecCccCCCccccceEEecCCCCcccccccccceecccCCCCCCceEEEEecCCccEEEEeccccCcceEEEEEEEeCCC
Q psy7040 130 LNKEGESEPLETFSSIIARDPYSKYTSVSSLDSHKRSNQPCGSGMVRKVQHLDYNTKLGVRMAQRADAGFYTVTAENING 209 (716)
Q Consensus 130 ~~~~g~~~~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~G~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g 209 (716)
.|..|.+.+..
T Consensus 88 ~~~~g~s~~~~--------------------------------------------------------------------- 98 (283)
T 1tdq_A 88 VRGTNESDASS--------------------------------------------------------------------- 98 (283)
T ss_dssp EETTEECCCEE---------------------------------------------------------------------
T ss_pred ECCCCCCCCee---------------------------------------------------------------------
Confidence 99887664221
Q ss_pred CceeEEEEEEecCCCCCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCCCCCeEEccccCcc---cceEEEc
Q psy7040 210 KDSVEVEVIVLDKPSPPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEATGRWTPAGETEGP---VTGLEVE 286 (716)
Q Consensus 210 ~~~~~~~~~v~~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~---~~~~~i~ 286 (716)
+.+..+|.+|.+ +.+.....+++.|+|++|. ..+.+|.|++...+...|...... .. ...+.+.
T Consensus 99 -------~~~~t~p~~P~~-l~~~~~~~~sv~l~W~~p~----~~i~~Y~v~~~~~~~~~~~~~~~~-~~~~~~~~~~i~ 165 (283)
T 1tdq_A 99 -------TQFTTEIDAPKN-LRVGSRTATSLDLEWDNSE----AEAQEYKVVYSTLAGEQYHEVLVP-KGIGPTTKTTLT 165 (283)
T ss_dssp -------EEEECCCCCCEE-EEEEEECSSCEEEEEECCS----SCCSEEEEEEEETTCCCCEEEEEE-CCSSSEEEEEEC
T ss_pred -------EEEECCCCCCCc-eEEEecCCCeEEEEecCCC----CCccEEEEEEEeCCCCcceEEECC-CCCcccceEEEe
Confidence 012236777777 8888889999999999865 258999999988766555333221 23 6889999
Q ss_pred CCCCCCeEEEEEEEEcCCCCCCCCcccceEEecCCCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeec
Q psy7040 287 GLIPNHKYKFRVRAVNKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEK 366 (716)
Q Consensus 287 ~L~p~~~y~~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~ 366 (716)
+|.|++.|.|+|.|.|..|.+.+.. +... ..|.+|.++.+...+.+++.|+|.+|. +.+.+|.|+++..
T Consensus 166 ~L~p~t~Y~~~V~A~n~~g~s~~~~----~~~~---t~~~~P~~l~~~~~~~~sv~l~W~~p~----~~i~~Y~v~~~~~ 234 (283)
T 1tdq_A 166 DLVPGTEYGVGISAVMNSKQSIPAT----MNAR---TELDSPRDLMVTASSETSISLIWTKAS----GPIDHYRITFTPS 234 (283)
T ss_dssp SCCTTCEEEEEEEEEETTEECCCEE----EEEE---CCCCCCEEEEEEEECSSCEEEEEECCC----SCCSEEEEEEECS
T ss_pred cCCCCCEEEEEEEEEeCCCCCcceE----EEec---CCCCCCCccEEeEecCCEEEEEEeCCC----CcccEEEEEEEcC
Confidence 9999999999999999888664432 2222 345578899999989999999999853 3689999999887
Q ss_pred CCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEEeCCCCCCCC
Q psy7040 367 YSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPS 411 (716)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s 411 (716)
++. +. .........++.|.+|.+++.|.|+|+|.|..|.+.++
T Consensus 235 ~~~-~~-~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~~~ 277 (283)
T 1tdq_A 235 SGI-SS-EVTVPRDRTSYTLTDLEPGAEYIISITAERGRQQSLES 277 (283)
T ss_dssp SSC-CE-EEEEESSCSEEEECCCCTTCCEEEEEEEEETTEECCCE
T ss_pred CCC-ee-EEEeCCCccEEEECCCCCCCEEEEEEEEEcCCCCCcce
Confidence 643 22 23345677899999999999999999999999887654
No 21
>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A*
Probab=99.94 E-value=3.5e-26 Score=233.72 Aligned_cols=370 Identities=15% Similarity=0.138 Sum_probs=175.1
Q ss_pred CCCCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCCcEEE---ecccCCCeE--EecCCCCCcEEEEEEE
Q psy7040 54 GLDPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETGVWIP---VGKTREPEM--DVTGLTPGHEYKFRVK 128 (716)
Q Consensus 54 ~~~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~---~~~~~~~~~--~i~~L~~~~~y~~~v~ 128 (716)
.++||.++++.... .++.|+|++|... +.++. |.|+|+..+.+.|.. |.....+.+ +..+|.+++.|.|||+
T Consensus 7 ~l~~P~nv~~~~~~-~~~~L~W~p~~~~-~~~i~-Y~V~y~~~~~~~W~~~~~c~~~~~~~~~~t~~~l~~~~~Y~~rV~ 83 (414)
T 3se4_A 7 NLKSPQKVEVDIID-DNFILRWNRSDES-VGNVT-FSFDYQKTGMDNWIKLSGCQNITSTKCNFSSLKLNVYEEIKLRIR 83 (414)
T ss_dssp ----CCCCCEEEET-TEEEEC-----------CE-EEEEEEESSCCCCEEEEEEEEESCSCEECCSSCCCTTSCEEEEEE
T ss_pred CCCCCceeEEEEEC-CceEEEEcCCCCC-CCCeE-EEEEEEECCCCCcEECcCccCCCCCEEECCcccccCCCcEEEEEE
Confidence 35778889888874 5689999998753 34577 999999877778864 333333444 4456899999999999
Q ss_pred EEecCccCCCccccceEEecCCCCcccccccccceecccCCCCCCceEEEEecCCccEEEEeccccCcceEEEEEEEeCC
Q psy7040 129 ALNKEGESEPLETFSSIIARDPYSKYTSVSSLDSHKRSNQPCGSGMVRKVQHLDYNTKLGVRMAQRADAGFYTVTAENIN 208 (716)
Q Consensus 129 a~~~~g~~~~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~G~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~ 208 (716)
|.| .+.|.++.........
T Consensus 84 A~n-~~~S~~s~~~~~~~~~------------------------------------------------------------ 102 (414)
T 3se4_A 84 AEK-ENTSSWYEVDSFTPFR------------------------------------------------------------ 102 (414)
T ss_dssp EEE-TTEEEEEECCCBCHHH------------------------------------------------------------
T ss_pred Eee-CCcCCCEecCceeecc------------------------------------------------------------
Confidence 999 5555443221110000
Q ss_pred CCceeEEEEEEecCCCCCCCCeEEeEEeCCeEEEEEECCCCCCC------CccceEEEEEEeCCCCCeEEccccCcccce
Q psy7040 209 GKDSVEVEVIVLDKPSPPGGPLKVSNVHAEGVTLDWKVPDDDGG------QPIEKYVVDKMDEATGRWTPAGETEGPVTG 282 (716)
Q Consensus 209 g~~~~~~~~~v~~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~------~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~ 282 (716)
...+.+|. +.+.. ..+++.|+|. |...++ ..+..|.|.+...+........ .....
T Consensus 103 -----------~~~~~pP~--v~~~~-~~~si~v~w~-P~~~~g~~~~~~~~~~~Y~v~y~~~~~~~~~~~~---~~~~~ 164 (414)
T 3se4_A 103 -----------KAQIGPPE--VHLEA-EDKAIVIHIS-PGTKDSVMWALDGLSFTYSLVIWKNSSGVEERIE---NIYSR 164 (414)
T ss_dssp -----------HCCCCCCE--EEEEE-CSSCEEEEEE-CSSSSCTTTGGGGSSCEEEEEEEETTTCCEEEEE---EECSE
T ss_pred -----------cceeCCCe--EEEEE-cCCEEEEEEE-cCCCCCceeeeecCcEEEEEEEEECCCCceEEEe---cCCcE
Confidence 01233443 55543 3568999999 654433 2467999999877665543322 34678
Q ss_pred EEEcCCCCCCeEEEEEEEEcC--CCCCCCCcccceEEecCCCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEE
Q psy7040 283 LEVEGLIPNHKYKFRVRAVNK--QGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYI 360 (716)
Q Consensus 283 ~~i~~L~p~~~y~~~v~a~n~--~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~ 360 (716)
+.|.+|.|++.|.|+|+|.|. .|.+..+......+. ...++.+|.++.+... +.++.|+|.+|. ...+|.
T Consensus 165 ~~i~~L~p~t~Y~~~V~A~n~~~~g~g~~S~~~~~~t~--~~~~~~~P~~v~~~~~-~~~~~l~W~pp~-----~~~~Y~ 236 (414)
T 3se4_A 165 HKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTT--VENELPPPENIEVSVQ-NQNYVLKWDYTY-----ANMTFQ 236 (414)
T ss_dssp EEECCCCTTCEEEEEEEEECTTTCCEEEECCCEEEECC--SCCSSCCCEEEEEEEE-TTEEEEEEECSS-----SSCEEE
T ss_pred EEEcCCCCCCeEEEEEEEEeccCCCCCccCcccccccc--cccccCCCCccEEEEe-cCCeEEEECCCC-----CCeEEE
Confidence 999999999999999999994 566666654322221 1233457888888765 467999999963 234999
Q ss_pred EEEeec--------CCCceEEEee-ecCCCCeEEec-CCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeec-CCCCCccc
Q psy7040 361 IEKKEK--------YSPIWEKCAQ-TEGDTPKGKVL-DLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARA-KKVSPYIN 429 (716)
Q Consensus 361 v~~~~~--------~~~~~~~~~~-~~~~~~~~~i~-~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~-~~~~P~~~ 429 (716)
|+|+.. +...|..... .......+.+. +|.+++.|.|+|+|.|..|.|.++....+.+... .+.+|.
T Consensus 237 v~y~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~t~~l~~~~~Y~~rV~A~n~~g~s~~s~~~~~~t~~~~~~~pP~-- 314 (414)
T 3se4_A 237 VQWLHAFLKRNPGNHLYKWKQIPDCENVKTTQCVFPQNVFQKGIYLLRVQASDGNNTSFWSEEIKFDTEIQAFLLPPV-- 314 (414)
T ss_dssp EEEEESGGGSCCCC--CCCCBCSTTTTBSSSEEEEEGGGSCSSEEEEEEEEECSSSEEEECCCEEEETTCC---------
T ss_pred EEEEehhccccccccccCceECCCccCCCCCEEcCCcccccCccEEEEEEEecCCCcccccccccccchhccccCCCe--
Confidence 999863 2345654321 12345667776 6999999999999999999887775432222211 111111
Q ss_pred ccccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCcee
Q psy7040 430 RDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDK 509 (716)
Q Consensus 430 ~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~ 509 (716)
+.+... .+
T Consensus 315 ------------------------------------------------------l~~~~~-~~----------------- 322 (414)
T 3se4_A 315 ------------------------------------------------------FNIRSL-SD----------------- 322 (414)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------------------------------------------------------EEEEEC-CC-----------------
Confidence 000000 00
Q ss_pred eEEEEEEEEEEEEEeCCCCCCC-----CceeeEEEEEEecCCCceeeeEEEccceeeeeccccceeEEEEcCCCCCCeEE
Q psy7040 510 GTAKVTVLGCSLKWNPPEDDGG-----APIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDNVDYFTKITIRPLQRSDTAQ 584 (716)
Q Consensus 510 ~s~~~~v~~v~l~W~~p~~~~~-----~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~ 584 (716)
++.|.|.+|...++ +.+.+|.|.|...+.. ..+. .. .....+.|.+|++++.|.
T Consensus 323 --------si~v~W~~P~~~~~~~~~~~~~~~Y~v~y~~~~~~---~~~~-~~---------~~~~~~~l~~L~p~t~Y~ 381 (414)
T 3se4_A 323 --------SFHIYIGAPKQSGNTPVIQDYPLIYEIIFWENTSN---AERK-II---------EKKTDVTVPNLKPLTVYC 381 (414)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------eEEEEEECCCCccccchhhcCCeEEEEEEEECCCC---ceEE-EE---------ecCCeEEeCCCCCCCeEE
Confidence 78899998876543 2478899887765431 1111 10 123789999999999999
Q ss_pred EEEEEEcC----CCCCccceeeeccCCC
Q psy7040 585 YTVTATNS----QGKDQVFIEVVVTDKP 608 (716)
Q Consensus 585 ~~v~a~n~----~G~~~~s~~~~v~~~p 608 (716)
|+|+|.+. .|.|..|..+.+...+
T Consensus 382 ~~V~A~~~~~~~~g~g~~S~~~~~~T~~ 409 (414)
T 3se4_A 382 VKARAHTMDEKLNKSSVFSDAVCEKTKP 409 (414)
T ss_dssp ----------------------------
T ss_pred EEEEEEecccccCCCCCCCCCEeEEeCC
Confidence 99999993 5888888766554443
No 22
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=99.93 E-value=8.8e-24 Score=205.11 Aligned_cols=269 Identities=17% Similarity=0.218 Sum_probs=188.9
Q ss_pred EEEEEecCCCCCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCC-CCCeEEccccCcccceEEEcCCCCCCe
Q psy7040 215 VEVIVLDKPSPPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEA-TGRWTPAGETEGPVTGLEVEGLIPNHK 293 (716)
Q Consensus 215 ~~~~v~~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~-~~~~~~~~~~~~~~~~~~i~~L~p~~~ 293 (716)
..+.+..+|.+|.+ +.+.....+++.|+|++|. .++.+|.|+++... ...|.... .......+.|.+|.|++.
T Consensus 7 ~~~~~~~~p~~P~~-l~~~~~~~~sv~l~W~~~~----~~~~~Y~v~~~~~~~~~~~~~~~-~~~~~~~~~i~~L~p~t~ 80 (283)
T 1tdq_A 7 GGGGGIPVIDGPTQ-ILVRDVSDTVAFVEWTPPR----AKVDFILLKYGLVGGEGGKTTFR-LQPPLSQYSVQALRPGSR 80 (283)
T ss_dssp -----CCSSCCCEE-EEEEEECSSCEEEEEECCS----SCCSEEEEEEEESSSSCCCEEEE-ECTTCSEEEECSCCTTCE
T ss_pred cccccccCCCCCcE-EEEEecCCCeEEEEEECCC----CceeEEEEEEEEecCCCCcEEEE-eCCCCCEEEecCCCCCCE
Confidence 34455678889988 8999999999999999875 25899999986543 33343222 235678999999999999
Q ss_pred EEEEEEEEcCCCCCCCCcccceEEecCCCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEE
Q psy7040 294 YKFRVRAVNKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEK 373 (716)
Q Consensus 294 y~~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~ 373 (716)
|.|+|+|.|..|.+.+.. .... ..|.+|.++.+...+.+++.|+|.+|. +.+.+|.|+++..+...+..
T Consensus 81 Y~~~V~a~~~~g~s~~~~----~~~~---t~p~~P~~l~~~~~~~~sv~l~W~~p~----~~i~~Y~v~~~~~~~~~~~~ 149 (283)
T 1tdq_A 81 YEVSISAVRGTNESDASS----TQFT---TEIDAPKNLRVGSRTATSLDLEWDNSE----AEAQEYKVVYSTLAGEQYHE 149 (283)
T ss_dssp EEEEEEEEETTEECCCEE----EEEE---CCCCCCEEEEEEEECSSCEEEEEECCS----SCCSEEEEEEEETTCCCCEE
T ss_pred EEEEEEEECCCCCCCCee----EEEE---CCCCCCCceEEEecCCCeEEEEecCCC----CCccEEEEEEEeCCCCcceE
Confidence 999999999887764322 2222 357788999999999999999999965 26899999999876555533
Q ss_pred EeeecCC---CCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEE
Q psy7040 374 CAQTEGD---TPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINV 450 (716)
Q Consensus 374 ~~~~~~~---~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v 450 (716)
.. .... ..++.+.+|.+++.|.|+|+|.|..|.+.+.. ......+.+|.
T Consensus 150 ~~-~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~~----~~~~t~~~~P~----------------------- 201 (283)
T 1tdq_A 150 VL-VPKGIGPTTKTTLTDLVPGTEYGVGISAVMNSKQSIPAT----MNARTELDSPR----------------------- 201 (283)
T ss_dssp EE-EECCSSSEEEEEECSCCTTCEEEEEEEEEETTEECCCEE----EEEECCCCCCE-----------------------
T ss_pred EE-CCCCCcccceEEEecCCCCCEEEEEEEEEeCCCCCcceE----EEecCCCCCCC-----------------------
Confidence 22 3334 77899999999999999999999887653321 11111111111
Q ss_pred eccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEEEEEEEEEEEEEeCCCCCC
Q psy7040 451 IGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVLGCSLKWNPPEDDG 530 (716)
Q Consensus 451 ~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v~~v~l~W~~p~~~~ 530 (716)
.+.+...... ++.|+|++|.
T Consensus 202 --------------------------------~l~~~~~~~~-------------------------sv~l~W~~p~--- 221 (283)
T 1tdq_A 202 --------------------------------DLMVTASSET-------------------------SISLIWTKAS--- 221 (283)
T ss_dssp --------------------------------EEEEEEECSS-------------------------CEEEEEECCC---
T ss_pred --------------------------------ccEEeEecCC-------------------------EEEEEEeCCC---
Confidence 0111111111 8999999873
Q ss_pred CCceeeEEEEEEecCCCceeeeEEEccceeeeeccccceeEEEEcCCCCCCeEEEEEEEEcCCCCCcccee
Q psy7040 531 GAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDNVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIE 601 (716)
Q Consensus 531 ~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~~ 601 (716)
+.+.+|.|++..... . ....... .....+.|.+|.+++.|.|+|+|.|..|.|.++..
T Consensus 222 -~~i~~Y~v~~~~~~~-~--~~~~~~~---------~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~~~~~ 279 (283)
T 1tdq_A 222 -GPIDHYRITFTPSSG-I--SSEVTVP---------RDRTSYTLTDLEPGAEYIISITAERGRQQSLESTV 279 (283)
T ss_dssp -SCCSEEEEEEECSSS-C--CEEEEEE---------SSCSEEEECCCCTTCCEEEEEEEEETTEECCCEEE
T ss_pred -CcccEEEEEEEcCCC-C--eeEEEeC---------CCccEEEECCCCCCCEEEEEEEEEcCCCCCcceee
Confidence 348999999987654 1 1111111 11388999999999999999999999998877654
No 23
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=99.93 E-value=9.2e-24 Score=205.57 Aligned_cols=266 Identities=17% Similarity=0.262 Sum_probs=190.7
Q ss_pred cCCCCCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCC-CCCeEEccccCcccceEEEcCCCCCCeEEEEEE
Q psy7040 221 DKPSPPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEA-TGRWTPAGETEGPVTGLEVEGLIPNHKYKFRVR 299 (716)
Q Consensus 221 ~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~-~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~ 299 (716)
.+|.+|.+ +.+.....+++.|+|++|. + .+.+|.|+++... ...|..... ......+.|.+|.|++.|.|+|+
T Consensus 19 ~~p~~P~~-l~~~~~~~~sv~l~W~~p~---~-~~~~Y~v~~~~~~~~~~~~~~~~-~~~~~~~~i~~L~p~t~Y~~~V~ 92 (290)
T 3r8q_A 19 PAIPAPTD-LKFTQVTPTSLSAQWTPPN---V-QLTGYRVRVTPKEKTGPMKEINL-APDSSSVVVSGLMVATKYEVSVY 92 (290)
T ss_dssp -CCCCCEE-EEEEEECSSCEEEEEECCS---S-CCCEEEEEEEESSSSSCCEEEEE-CTTCCEEEECSCCSSCEEEEEEE
T ss_pred CCCCCCCc-eEEEECCCCEEEEEEeCCC---C-CeeEEEEEEEeCCCCCceEEEEc-CCCccEEEeCCCCCCCEEEEEEE
Confidence 45677777 8888999999999999862 2 5899999998765 344544432 34578999999999999999999
Q ss_pred EEcCCCCCCCCcccceEEecCCCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecC
Q psy7040 300 AVNKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEG 379 (716)
Q Consensus 300 a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~ 379 (716)
|.|..|.+.++... +. +. ..|.+|.++.+...+.+++.|+|.+|. +.+.+|.|+++..+...+.. .....
T Consensus 93 a~~~~g~s~~s~~~--~~--t~-~~~~~P~~l~~~~~~~~sv~l~W~~p~----~~~~~Y~v~~~~~~~~~~~~-~~~~~ 162 (290)
T 3r8q_A 93 ALKDTLTSRPAQGV--VT--TL-ENVSPPRRARVTDATETTITISWRTKT----ETITGFQVDAVPANGQTPIQ-RTIKP 162 (290)
T ss_dssp EEETTEECCCEEEE--EE--CC-CCCCCCEEEEEEEECSSCEEEEEECCS----CCCCEEEEEEEESSSCCCEE-EEECT
T ss_pred EEeCCCCCCCccee--Ee--cC-CCCCCCceeEEEEcCCCeEEEEEeCCC----CcccEEEEEEEECCCCcceE-EecCC
Confidence 99999887765321 22 21 235688899999999999999999962 36899999998776443322 33456
Q ss_pred CCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccCCCeEE
Q psy7040 380 DTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKE 459 (716)
Q Consensus 380 ~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~ 459 (716)
...++.|.+|.+++.|.|+|+|.|..|.+.+.. ......+.+|. .+.+
T Consensus 163 ~~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~~----~~~~t~p~~P~-----------------~l~~----------- 210 (290)
T 3r8q_A 163 DVRSYTITGLQPGTDYKIYLYTLNDNARSSPVV----IDASTAIDAPS-----------------NLRF----------- 210 (290)
T ss_dssp TCSEEEECSCCTTCEEEEEEEEEETTEECCCEE----EEEECCCCCCE-----------------EEEE-----------
T ss_pred CccEEEECCCCCCCEEEEEEEEEeCCcccCCEE----EEecCCCCCCC-----------------ccEE-----------
Confidence 788999999999999999999999988764321 11111111111 0110
Q ss_pred EEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEEEEEEEEEEEEEeCCCCCCCCceeeEEE
Q psy7040 460 WLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVLGCSLKWNPPEDDGGAPIEYYMV 539 (716)
Q Consensus 460 W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v~~v~l~W~~p~~~~~~~i~~y~v 539 (716)
. ..+.. ++.|+|.+|. +.+.+|.|
T Consensus 211 ---------------------------~-------------~~~~~------------sv~l~W~~p~----~~~~~Y~v 234 (290)
T 3r8q_A 211 ---------------------------L-------------ATTPN------------SLLVSWQPPR----ARITGYII 234 (290)
T ss_dssp ---------------------------E-------------EEETT------------EEEEEEECCS----SCCCEEEE
T ss_pred ---------------------------E-------------eeCCC------------EEEEEEeCCC----CcccEEEE
Confidence 0 00001 8999999986 24899999
Q ss_pred EEEecCCCceeeeEEEccceeeeeccccceeEEEEcCCCCCCeEEEEEEEEcCCCCCccce
Q psy7040 540 EKMETDTGKVLIKWIRTNDKRVTIDNVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFI 600 (716)
Q Consensus 540 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~ 600 (716)
++..... ..|...... ......+.+.+|.+++.|.|+|+|.|..|.|.+..
T Consensus 235 ~~~~~~~----~~~~~~~~~------~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p~~ 285 (290)
T 3r8q_A 235 KYEKPGS----PPREVVPRP------RPGVTEATITGLEPGTEYTIYVIALKNNQKSEPLI 285 (290)
T ss_dssp EEECTTS----CCEECSSCC------CTTCCEEEECSCCTTCEEEEEEEEEETTEECCCEE
T ss_pred EEEeCCC----CcceeEecc------CCCccEEEECCCCCCCEEEEEEEEEeCCCcCCccc
Confidence 9998765 334322111 11238999999999999999999999999887643
No 24
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=99.93 E-value=1.2e-24 Score=212.07 Aligned_cols=255 Identities=16% Similarity=0.173 Sum_probs=183.1
Q ss_pred CCeEEEEecCCC-CCCCCccceEEEEEEcCCCCcEEEecccCCCeEEecCCCCCcEEEEEEEEEecCccCCCccccceEE
Q psy7040 68 KDGCTLKWNKPK-DDGGEPLEGYLVEKYDPETGVWIPVGKTREPEMDVTGLTPGHEYKFRVKALNKEGESEPLETFSSII 146 (716)
Q Consensus 68 ~~s~~l~W~~p~-~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~~~~g~~~~s~~~~~~~ 146 (716)
.+++.|+|+++. .+.++++.+|.|+++..+.... ... .....+.+|.+++.|.|+|+|.|..|.+.++... .
T Consensus 22 ~~sv~l~W~p~~~~~~~g~i~~Y~V~~~~~~~~~~-~~~---~~~~~~~~l~p~t~Y~~~V~A~n~~G~s~~s~~~---~ 94 (290)
T 3l5i_A 22 YRTVQLVWKTLPPFEANGKILDYEVTLTRWKSHLQ-NYT---VNATKLTVNLTNDRYLATLTVRNLVGKSDAAVLT---I 94 (290)
T ss_dssp CEEEEEEECCCCHHHHCSCEEEEEEEEEETTSCCE-EEE---ESSSEEEEEECSSCEEEEEEEEESSCBCCCEEEE---E
T ss_pred CceEEEEEccCCchhcCCceEeEEEEEEeCCcCce-eEe---cCCcEEEEEcCCceEEEEEEEEcCCCCCCCceEE---e
Confidence 479999999843 2345669999999987665432 111 1345678899999999999999999987655211 1
Q ss_pred ecCCCCcccccccccceecccCCCCCCceEEEEecCCccEEEEeccccCcceEEEEEEEeCCCCceeEEEEEEecCCCCC
Q psy7040 147 ARDPYSKYTSVSSLDSHKRSNQPCGSGMVRKVQHLDYNTKLGVRMAQRADAGFYTVTAENINGKDSVEVEVIVLDKPSPP 226 (716)
Q Consensus 147 ~~~p~~~~~~~~~~~~~~~~~~p~G~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~~p 226 (716)
.... ..+|.++
T Consensus 95 ~~~~---------------------------------------------------------------------~~~~~p~ 105 (290)
T 3l5i_A 95 PACD---------------------------------------------------------------------FQATHPV 105 (290)
T ss_dssp CCTT---------------------------------------------------------------------CCCCCCC
T ss_pred eccc---------------------------------------------------------------------ccCCCcc
Confidence 1000 0123344
Q ss_pred CCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCCCC-----CeEEccccCcccceEEEcCCCCCCeEEEEEEEE
Q psy7040 227 GGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEATG-----RWTPAGETEGPVTGLEVEGLIPNHKYKFRVRAV 301 (716)
Q Consensus 227 ~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~-----~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~ 301 (716)
.+ +.+... .+++.|+|++|.. ++.+|.|+++..... .|..... .....+.+.+|.|++.|.|+|.|.
T Consensus 106 ~~-~~~~~~-~~si~l~W~~p~~----~i~~Y~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~L~p~t~Y~~~V~A~ 177 (290)
T 3l5i_A 106 MD-LKAFPK-DNMLWVEWTTPRE----SVKKYILEWCVLSDKAPCITDWQQEDG--TVHRTYLRGNLAESKCYLITVTPV 177 (290)
T ss_dssp EE-EEEEEE-TTEEEEEEECCSS----CCCEEEEEEEEECSSSCCCCEEEEEET--TCSEEECCSCCCTTCEEEEEEEEE
T ss_pred ce-eEEEeC-CCeEEEEEeCCCC----CCCcEEEEEEECCCCCCCCcCeEEccC--CCcceEEecCcCCccEEEEEEEEE
Confidence 33 555544 4799999998653 689999999875443 3555432 446778889999999999999999
Q ss_pred cCCCCCCCCcccceEEecCCCCCCCCCCCcEEEeeeCCeEEEEecCC-CCCCCccceEEEEEEeecCCCceEEEeeecCC
Q psy7040 302 NKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDFDTDFVELAWTPP-EQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGD 380 (716)
Q Consensus 302 n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~p-~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~ 380 (716)
|..|.+... . +...+....|..|.++.+...+.+++.|+|.++ ....++.|.+|.|+++..++. +. .......
T Consensus 178 n~~g~g~~~-~---~~~~t~~~~P~~~p~~~~~~~~~~sv~l~W~~~~~~~~~g~i~~Y~v~~~~~~~~-~~-~~~~~~~ 251 (290)
T 3l5i_A 178 YADGPGSPE-S---IKAYLKQAPPSKGPTVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGN-ET-AVNVDSS 251 (290)
T ss_dssp ETTEECCCE-E---EEEESSCCCCSSCCCEEEEEECSSCEEEEECCCCHHHHSSCCCEEEEEEEETTSC-CE-EEEEETT
T ss_pred eCCcccccE-E---EEeEccccCCCCCCeeeEeeccCCEEEEEEcCCChhccCCEEEEEEEEEEeCCCC-eE-EEEeCCC
Confidence 999987632 2 233345566776668888889999999999953 223455799999999987633 33 2334677
Q ss_pred CCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCC
Q psy7040 381 TPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDP 413 (716)
Q Consensus 381 ~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~ 413 (716)
..+++|.+|.+++.|.|+|+|.|..| +..+..
T Consensus 252 ~~~~~~~~L~p~t~Y~~~V~A~n~~G-g~~s~~ 283 (290)
T 3l5i_A 252 HTEYTLSSLTSDTLYMVRMAAYTDEG-GKDGPE 283 (290)
T ss_dssp CSEEEECSCCTTCEEEEEEEEEETTE-EEECCC
T ss_pred ceEEEeCCCCCCCEEEEEEEEEeCCC-CCCCCc
Confidence 88999999999999999999999999 655543
No 25
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=99.92 E-value=1.1e-25 Score=251.19 Aligned_cols=285 Identities=20% Similarity=0.268 Sum_probs=208.0
Q ss_pred CCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcC--------------CCCcEEEeccc-----------CCCeEE
Q psy7040 59 GPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDP--------------ETGVWIPVGKT-----------REPEMD 113 (716)
Q Consensus 59 ~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~--------------~~~~~~~~~~~-----------~~~~~~ 113 (716)
..+.+..++.+++.|+|++|..+++.++.+|.|+|+.. +...|...... ..+++.
T Consensus 473 ~~l~v~~~s~~sv~LsW~~p~~~~~~~i~gY~V~y~~~~~~n~t~~~~~~~c~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 552 (897)
T 2dtg_E 473 LKFSYIRTSFDKILLRWEPYWPPDFRDLLGFMLFYKEAPYQNVTEFDGQDACGSNSWTVVDIDPPLRSNDPKSQNHPGWL 552 (897)
T ss_dssp CCCSEEEECSSCEEEECCCCCSSSCCCEEEECCCSSSCCTTTCCCCCCCCCSCCCCCCCCCSCCEEEECCCCSSSCCEEE
T ss_pred eEEEEEEEecCeEEEEecCCCCCCCceeeeEEEEEEeCCCCCcccccCccccCCCcceEEecCCCccccccccccccceE
Confidence 35788899999999999999866777899999999765 23456543321 147899
Q ss_pred ecCCCCCcEEEEEEEE-EecCcc----CCCccccceEEecCCCCcccccccccceecccCCCCCCceEEEEecCCccEEE
Q psy7040 114 VTGLTPGHEYKFRVKA-LNKEGE----SEPLETFSSIIARDPYSKYTSVSSLDSHKRSNQPCGSGMVRKVQHLDYNTKLG 188 (716)
Q Consensus 114 i~~L~~~~~y~~~v~a-~~~~g~----~~~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~G~~~~~~~~~~~~~~~l~ 188 (716)
|.+|+|++.|.|+|+| .|..|. +.+|......+.
T Consensus 553 l~~L~P~T~Y~~~V~A~~n~~G~~~~~~~~S~~v~~~T~----------------------------------------- 591 (897)
T 2dtg_E 553 MRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTD----------------------------------------- 591 (897)
T ss_dssp ECSCCSSCBCCBEEEECCCCCSSCCCCCCBCCCBCCBCC-----------------------------------------
T ss_pred eCCCCCCcEEEEEEEEEEeccCCccccCCccceEEEECC-----------------------------------------
Confidence 9999999999999999 898886 444443322221
Q ss_pred EeccccCcceEEEEEEEeCCCCceeEEEEEEecCCCCCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCCCC
Q psy7040 189 VRMAQRADAGFYTVTAENINGKDSVEVEVIVLDKPSPPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEATG 268 (716)
Q Consensus 189 i~~l~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~ 268 (716)
.++|.+|.+ +.+.....+++.|+|++|...+| .+.+|.|+++.....
T Consensus 592 -------------------------------~~~Ps~P~~-l~~~~~s~tsI~LsW~pP~~~nG-~I~~Y~V~~~~~~~~ 638 (897)
T 2dtg_E 592 -------------------------------ATNPSVPLD-PISVSNSSSQIILKWKPPSDPNG-NITHYLVFWERQAED 638 (897)
T ss_dssp -------------------------------CCCCCCCEE-EEEEECSSSCEEEEEECCCCSSS-SCSEEECCEEEECCC
T ss_pred -------------------------------CCCCcCCcc-eEEEeCCCCEEEEEEeCCCCCCC-CeeEEEEEEEECCCC
Confidence 135677776 78888888999999999877666 499999987653220
Q ss_pred -----------------------------------------------------------------CeEEcc---------
Q psy7040 269 -----------------------------------------------------------------RWTPAG--------- 274 (716)
Q Consensus 269 -----------------------------------------------------------------~~~~~~--------- 274 (716)
.|....
T Consensus 639 ~~~~~~~~~~~~~l~p~t~Y~~~V~A~~~~~~s~~~~~~~~~~~~~~p~~p~~~~~~~~~~s~~~~W~~~~~n~v~~~~p 718 (897)
T 2dtg_E 639 SELFELDYCLKGLKLPSRTWSPPFESEDSQKHNQSEYEDSAGECCSCPKTDSQILKELEESSFRKTFEDYLHNVVFVPRP 718 (897)
T ss_dssp CSCTTCSSSCSCCCCCC---------------------------------------------------------------
T ss_pred ccceecccccCCCcCCccccceeeecccccCcccccccccCCCccCCcCcccchhhhhhhhheeeeEEEccCceEEccCC
Confidence 111000
Q ss_pred ----------------------ccCcccceEEEcCCCCCCeEEEEEEEEcCCCCCCCCcccceEEecCCC--CCCCCCCC
Q psy7040 275 ----------------------ETEGPVTGLEVEGLIPNHKYKFRVRAVNKQGKSEPLTTTASIEAKNPF--NQPGKPGT 330 (716)
Q Consensus 275 ----------------------~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~~~~~~~~~~~~~~--~~p~~p~~ 330 (716)
........+.|.+|.|++.|.|+|.|.|..|.+........+...+.. .+|.+|.+
T Consensus 719 ~~~r~~l~~~~n~t~~~~~~~~~~~~~~t~~~i~gL~p~t~Y~~~V~A~n~~G~g~~~s~s~~v~~~T~~~~~~p~~P~~ 798 (897)
T 2dtg_E 719 SRKRRSLGDVGNAGNNEEHRPFEKVVNKESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTMPEAKADDIVGP 798 (897)
T ss_dssp -----------------CCSCSCEECSCSEEEECSSCSSCEEEECCEEESCSSSSCCBCCCCCEEEECCCCCCCCCCCCC
T ss_pred CcccccccccccccCccccceEEecCCceEEEECCCCCCcEEEEEEEEEeCCCCCCCCCCCceeEEeccCccCCCCCCcc
Confidence 001134789999999999999999999999987642223234443332 56788889
Q ss_pred cEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEee--ecCCCCeEEecCCCCCCeEEEEEEEEeCCCCC
Q psy7040 331 PEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQ--TEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPG 408 (716)
Q Consensus 331 ~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~--~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~ 408 (716)
+.+...+.+++.|+|.+|...+| .|.+|.|+|+..+...+..... .......+++.+|.|+ .|.|+|+|.|..|.|
T Consensus 799 l~~~~~~~~sv~LsW~~P~~~nG-~I~~Y~V~y~~~~~~~~~~~~~~~~~~~~~~~~l~~L~pg-tY~~rV~A~n~~G~G 876 (897)
T 2dtg_E 799 VTHEIFENNVVHLMWQEPKEPNG-LIVLYEVSYRRYGDEELHLCDTRKHFALERGCRLRGLSPG-NYSVRIRATSLAGNG 876 (897)
T ss_dssp CCCCSSSSSCCCCCCCCCCSCSS-CEEEECCCCBSSSBCCCCCCCCSSSCCCTTCCCCCSCCSS-EECCCCCEEETTBCC
T ss_pred eEEEeCCCCEEEEEECCCCCCCC-CEEEEEEEEEECCCcceEEEEeeeeecccCcEEECCCCCC-cEEEEEEEEeCCccc
Confidence 98888889999999999876555 6999999998766321111111 1346678999999999 699999999999999
Q ss_pred CCCCCCCceEe
Q psy7040 409 EPSDPTAPHIA 419 (716)
Q Consensus 409 ~~s~~~~~~~~ 419 (716)
++|....+.+.
T Consensus 877 ~~S~~v~~~T~ 887 (897)
T 2dtg_E 877 SWTEPTYFYVT 887 (897)
T ss_dssp CCCCCCEECCC
T ss_pred CCCCCEEEEeC
Confidence 99887665544
No 26
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.92 E-value=7.3e-26 Score=253.52 Aligned_cols=554 Identities=12% Similarity=0.079 Sum_probs=79.3
Q ss_pred CeEEecCCCCCcEEEEEEEEEecCccCCCccccceEE-ecCCCC---------ccc--c--cccccceecccCCCCC---
Q psy7040 110 PEMDVTGLTPGHEYKFRVKALNKEGESEPLETFSSII-ARDPYS---------KYT--S--VSSLDSHKRSNQPCGS--- 172 (716)
Q Consensus 110 ~~~~i~~L~~~~~y~~~v~a~~~~g~~~~s~~~~~~~-~~~p~~---------~~~--~--~~~~~~~~~~~~p~G~--- 172 (716)
..|.|.+++..+.+.|+|.+.+. +.+. .....+. ...|.. ... . ....+.|.+.. |...
T Consensus 86 ~~l~I~~~~~~d~G~Y~C~~~~~-~~~~--~~~v~v~~~~~~~~~~~~~~~~~~~v~~G~~~~v~L~C~~~~-p~~~v~w 161 (772)
T 3v2a_R 86 KTLTIPKVIGNDTGAYKCFYRET-DLAS--VIYVYVQDYRSPFIASVSDQHGVVYITENKNKTVVIPCLGSI-SNLNVSL 161 (772)
T ss_dssp -------------------------------------------------CEEEEEEESSCCCEEEECCCCSC-SSCCEEE
T ss_pred EEEEECCCcHhhCEeEEEEEcCC-CEEE--EEEEEECCCCCCceEcCcccceeEEEecCCCCeEEEEccCCC-CCcEEEE
Confidence 57899999999999999999722 1111 1111111 111111 011 1 22445677765 2210
Q ss_pred -----CceEEE----EecCCccEEEEeccccCcceEEEEEEEeCCCCcee-EEEEEEecCCCC-----CCCCeEEeEEeC
Q psy7040 173 -----GMVRKV----QHLDYNTKLGVRMAQRADAGFYTVTAENINGKDSV-EVEVIVLDKPSP-----PGGPLKVSNVHA 237 (716)
Q Consensus 173 -----~~~~~~----~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~-~~~~~v~~~p~~-----p~~~~~~~~~~~ 237 (716)
+..... ........|.|.+++..|.|.|+|.+.+..+.... ...+.+...+.+ |.. .+....+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~~~v~~~~~~~v~~~~~~--~~~v~~G 239 (772)
T 3v2a_R 162 CARYPEKRFVPDGNRISWDSKKGFTIPSYMISYAGMVFCEAKINDESYQSIMYIVVVVGYRIYDVVLSPSH--GIELSVG 239 (772)
T ss_dssp EEETTTEEECCCSSSCEEETTTEEEEEGGGTTTCSEEEEEEEETTEEEECCEEEEEEECCCEEEEEEECCS--CEEEETT
T ss_pred EecCCCccccCCCceeecCCCCCeEecCCChhhCeEEEEEEEECCceEEEEEEEEEEecCccceeeeCCCC--ceEEecC
Confidence 011000 00123577999999999999999999986543222 233333322211 111 1234467
Q ss_pred CeEEEEEECCCCCCCCccceEEEEEEeCCCCC----eEE--cc-----ccCcccceEEEcCCCCCCeEEEEEEEEcCCCC
Q psy7040 238 EGVTLDWKVPDDDGGQPIEKYVVDKMDEATGR----WTP--AG-----ETEGPVTGLEVEGLIPNHKYKFRVRAVNKQGK 306 (716)
Q Consensus 238 ~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~~----~~~--~~-----~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~ 306 (716)
+.++|.|....... +... +.|...+... ... .. ........+.|.++...+.+.|+|.|.|..|.
T Consensus 240 ~~v~L~C~~~~~~~--~~~~--~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~ 315 (772)
T 3v2a_R 240 EKLVLNCTARTELN--VGID--FNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMT 315 (772)
T ss_dssp CCEEEEEEEEECTT--CCCE--EEEECC--------CEEEEC-----CCCEEEEEEEEESSCCSTTCSEEEEEEECSSCE
T ss_pred CcEEEEEEEecCCC--Ccee--EEEecCCccCCCceeeeccccccccccceEEEEEEEECcCCcCCCeEEEEEEEcCCcc
Confidence 88899998632211 1112 2222221110 000 00 11123567999999999999999999987664
Q ss_pred CCCCcccceEEecCCCCCCCCC-CCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEE
Q psy7040 307 SEPLTTTASIEAKNPFNQPGKP-GTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGK 385 (716)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~p~~p-~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~ 385 (716)
... . ..+.+..+......+ .........+..+.|.|..... +.. .+.|...+ ......... .....+.
T Consensus 316 ~~~--~-~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~~~----p~~--~v~W~~~g-~~l~~~~~~-~~~~~L~ 384 (772)
T 3v2a_R 316 KKN--S-TFVRVHEKPFVAFGSGMESLVEATVGERVRIPAKYLGY----PPP--EIKWYKNG-IPLESNHTI-KAGHVLT 384 (772)
T ss_dssp EEE--E-EEEEEECCCC---------------------------------------------------------------
T ss_pred eeE--E-EEEEEeCCCeeEeccCCCCcEEEcCCCcEEEEEEEeee----CCC--eEEEEECC-EeCCCCceE-ccceeEE
Confidence 221 1 112222111111111 0011222344566777765221 111 11222211 000000000 1336688
Q ss_pred ecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCccccccc--ccEEEecCCeEEEEEEEeccCCCe-EEEEe
Q psy7040 386 VLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQL--SDIKVRAGSNFEFDINVIGEPIPT-KEWLC 462 (716)
Q Consensus 386 i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~--~~~~~~~g~~~~~~~~v~~~p~~~-~~W~~ 462 (716)
|.++...+.+.|+|.|.|..|....+........ .+|.+..... ....+..|+.+.|.|.+.+.|.+. +.|++
T Consensus 385 i~~v~~~d~G~Y~C~a~n~~g~~~~s~~~~l~v~----~~P~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~ 460 (772)
T 3v2a_R 385 IMEVSERDTGNYTVILTNPISKEKQSHVVSLVVY----VPPQIGEKSLISPVDSYQYGTTQTLTCTVYAIPPPHHIHWYW 460 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EecCChhcCceEEEEEEECCcCeEEEEEEEEEEe----cCCcccccccCCCccccCCCCcEEEEeEeccCCCCcEEEEEE
Confidence 8899999999999999999886543332222111 2444332111 112377899999999999999997 99998
Q ss_pred CCeEec--------------------------------c-CCcEEEEeC--CCeEEEEECCCCCCCceeEEEEEEcCCCc
Q psy7040 463 NDITII--------------------------------S-KDRFKIVND--DKSTKLKVFDSKRGDSGIYTLAVKNSWGT 507 (716)
Q Consensus 463 ~~~~~~--------------------------------~-~~~~~~~~~--~~~~~l~i~~l~~~~~~~y~~~a~n~~g~ 507 (716)
++.... . .....+... .....|.|.++ .+.|.|+|.|.|..|.
T Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~L~i~~~--~d~G~Y~C~a~N~~g~ 538 (772)
T 3v2a_R 461 QLEEECANEPSQAVSVTNPYPCEEWRSVEDFQGGNKIEVNKNQFALIEGKNKTVSTLVIQAA--NVSALYKCEAVNKVGR 538 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCccccccccccccccCcCccccccccccccCCCcEEEeccceeeccCcceEEEEEEEeec--ccCeEEEEEEEccccc
Confidence 643210 0 001111111 11245666665 6889999999999998
Q ss_pred eeeEEEEEEE---EEEEEEeCCCCCCCCceeeEEEEEEecCCCceeeeEEEccceeeeecc-------------------
Q psy7040 508 DKGTAKVTVL---GCSLKWNPPEDDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDN------------------- 565 (716)
Q Consensus 508 ~~~s~~~~v~---~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~------------------- 565 (716)
......+.+. .+.+.-......+......|.+...+. +.+.|++.+........
T Consensus 539 ~~~~~~l~V~~~p~i~~~p~~~~~~G~~v~l~C~~~~~p~----~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 614 (772)
T 3v2a_R 539 GERVISFHVTRGPEITLQPDMQPTEQESVSLWCTADRSTF----ENLTWYKLGPQPLPIHVGELPTPVCKNLDTLWKLNA 614 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cceeEEEEEECCceeeccCCcccccCCceEEEEeccCCCC----CCcEEEEcCCcccccccCcccccccccccceeeccc
Confidence 8877777666 222211111112222233444443333 33889886643221100
Q ss_pred ------ccceeEEEEcCCCCCCeEEEEEEEEcCCCCCccce--eeec--cCCCCCCccceeeccceeEEEEEEeeEEEEe
Q psy7040 566 ------VDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFI--EVVV--TDKPSAPEGPIQWLLTLTDVTWEISNYLQEL 635 (716)
Q Consensus 566 ------~~~~~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~--~~~v--~~~p~~~~~~~~~~~~~v~l~w~i~~y~v~~ 635 (716)
......+.|.++...+.+.|+|.|.|..|....+. .+.| ..+|... .......+. .|..+
T Consensus 615 ~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~s~~~~l~v~~~~~P~~~---~~~~~~~v~-----~g~~~-- 684 (772)
T 3v2a_R 615 TMFSNSTNDILIMELKNASLQDQGDYVCLAQDRKTKKRHCVVRQLTVLERVAPTIT---GNLENQTTS-----IGESI-- 684 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eeeecCCCceEEEEECCCCccCCcEEEEEEEeCCCCeEEEEEEeecccccCCCEee---cCCCceEEe-----CCCCE--
Confidence 00123488999999999999999999665433222 2223 3344311 111111111 12222
Q ss_pred eeeccCcee----eEEEEeCCeEeeec----ccceeeEEEEccCCCCCcEEEEEEEEcCCCCceeeEEEEEecCCCCC
Q psy7040 636 HSSLMPISL----ESQYLMNDKRVTID----NVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTDKPSAP 705 (716)
Q Consensus 636 ~~~~~~~~~----~~~W~~~~~~~~~~----~~~~~~~~~i~~l~~~~~y~y~~~a~n~~G~~~~s~~l~v~~~p~~p 705 (716)
.|.|.+.| .+.|+++|..+..+ .......|.|.++..+|+|.|+|.|.|..|....++.|.|..+|...
T Consensus 685 -~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~p~~~ 761 (772)
T 3v2a_R 685 -EVSCTASGNPPPQIMWFKDNETLVEDSGIVLKDGNRNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFIIEGAQEKT 761 (772)
T ss_dssp ------------------------------------------------------------------------------
T ss_pred -EEEEEeCccCCCeEEEEECCeECcCCCCeEEcCCCcEEEECcCCHHHCEEEEEEEEeCCcceeEEEEEEEECCCCcc
Confidence 37888877 89999999988665 12234789999999999999999999999999999999999988765
No 27
>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A*
Probab=99.91 E-value=1.7e-23 Score=213.74 Aligned_cols=365 Identities=15% Similarity=0.136 Sum_probs=167.2
Q ss_pred CCCCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCCCCCeEEc---cccCcccceEEEcCCCCCCeEEEEEE
Q psy7040 223 PSPPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEATGRWTPA---GETEGPVTGLEVEGLIPNHKYKFRVR 299 (716)
Q Consensus 223 p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~---~~~~~~~~~~~i~~L~p~~~y~~~v~ 299 (716)
..+|.+ +.+... ..++.|+|+++.+.+ .++. |.|+++..+...|... .......+.++..+|.+++.|.|+|+
T Consensus 8 l~~P~n-v~~~~~-~~~~~L~W~p~~~~~-~~i~-Y~V~y~~~~~~~W~~~~~c~~~~~~~~~~t~~~l~~~~~Y~~rV~ 83 (414)
T 3se4_A 8 LKSPQK-VEVDII-DDNFILRWNRSDESV-GNVT-FSFDYQKTGMDNWIKLSGCQNITSTKCNFSSLKLNVYEEIKLRIR 83 (414)
T ss_dssp ---CCC-CCEEEE-TTEEEEC-----------CE-EEEEEEESSCCCCEEEEEEEEESCSCEECCSSCCCTTSCEEEEEE
T ss_pred CCCCce-eEEEEE-CCceEEEEcCCCCCC-CCeE-EEEEEEECCCCCcEECcCccCCCCCEEECCcccccCCCcEEEEEE
Confidence 456777 777776 567899999876643 3566 9999998777788743 22233345566667899999999999
Q ss_pred EEcCCCCCCCCcccceEEecCCCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCC------ccceEEEEEEeecCCCceEE
Q psy7040 300 AVNKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGG------SPIVGYIIEKKEKYSPIWEK 373 (716)
Q Consensus 300 a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~------~~i~~y~v~~~~~~~~~~~~ 373 (716)
|.| .+.+.++.......... ..+++| .+.+... .+++.|+|. |...++ +.+.+|+|.|+..++.....
T Consensus 84 A~n-~~~S~~s~~~~~~~~~~--~~~~pP-~v~~~~~-~~si~v~w~-P~~~~g~~~~~~~~~~~Y~v~y~~~~~~~~~~ 157 (414)
T 3se4_A 84 AEK-ENTSSWYEVDSFTPFRK--AQIGPP-EVHLEAE-DKAIVIHIS-PGTKDSVMWALDGLSFTYSLVIWKNSSGVEER 157 (414)
T ss_dssp EEE-TTEEEEEECCCBCHHHH--CCCCCC-EEEEEEC-SSCEEEEEE-CSSSSCTTTGGGGSSCEEEEEEEETTTCCEEE
T ss_pred Eee-CCcCCCEecCceeeccc--ceeCCC-eEEEEEc-CCEEEEEEE-cCCCCCceeeeecCcEEEEEEEEECCCCceEE
Confidence 999 55554433221111111 123344 3666544 468999999 654432 35789999998877554322
Q ss_pred EeeecCCCCeEEecCCCCCCeEEEEEEEEeC--CCCCCCCCCCCceEeecCC-CCCcccccccccEEEecCCeEEEEEEE
Q psy7040 374 CAQTEGDTPKGKVLDLIEGNQYEFRVLAVNK--GGPGEPSDPTAPHIARAKK-VSPYINRDQLSDIKVRAGSNFEFDINV 450 (716)
Q Consensus 374 ~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~--~g~~~~s~~~~~~~~~~~~-~~P~~~~~~~~~~~~~~g~~~~~~~~v 450 (716)
......++.|.+|.|++.|.|+|+|.|. .|.|..|......+....+ .+|. ++
T Consensus 158 ---~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~~~g~g~~S~~~~~~t~~~~~~~~P~-----------------~v---- 213 (414)
T 3se4_A 158 ---IENIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVENELPPPE-----------------NI---- 213 (414)
T ss_dssp ---EEEECSEEEECCCCTTCEEEEEEEEECTTTCCEEEECCCEEEECCSCCSSCCCE-----------------EE----
T ss_pred ---EecCCcEEEEcCCCCCCeEEEEEEEEeccCCCCCccCcccccccccccccCCCC-----------------cc----
Confidence 2245678999999999999999999994 5777666543332222111 1111 11
Q ss_pred eccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEEEEEEEEEEEEEeCCCCCC
Q psy7040 451 IGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVLGCSLKWNPPEDDG 530 (716)
Q Consensus 451 ~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v~~v~l~W~~p~~~~ 530 (716)
++.+.| . ++.|+|++|..
T Consensus 214 -----------------------------------------------~~~~~~-~------------~~~l~W~pp~~-- 231 (414)
T 3se4_A 214 -----------------------------------------------EVSVQN-Q------------NYVLKWDYTYA-- 231 (414)
T ss_dssp -----------------------------------------------EEEEET-T------------EEEEEEECSSS--
T ss_pred -----------------------------------------------EEEEec-C------------CeEEEECCCCC--
Confidence 111111 0 67899999742
Q ss_pred CCceeeEEEEEEecC----CCceeeeEEEccceeeeeccccceeEEEEc-CCCCCCeEEEEEEEEcCCCCCccceeeec-
Q psy7040 531 GAPIEYYMVEKMETD----TGKVLIKWIRTNDKRVTIDNVDYFTKITIR-PLQRSDTAQYTVTATNSQGKDQVFIEVVV- 604 (716)
Q Consensus 531 ~~~i~~y~v~~~~~~----~~~~~~~w~~~~~~~~~~~~~~~~~~~~i~-~L~~~~~y~~~v~a~n~~G~~~~s~~~~v- 604 (716)
..+|.|+|.... .+.-...|........ .....+.+. +|.+++.|.|+|+|.|..|.|+++....+
T Consensus 232 ---~~~Y~v~y~~~~~~~~~~~~~~~w~~~~~~~~-----~~~~~~~~t~~l~~~~~Y~~rV~A~n~~g~s~~s~~~~~~ 303 (414)
T 3se4_A 232 ---NMTFQVQWLHAFLKRNPGNHLYKWKQIPDCEN-----VKTTQCVFPQNVFQKGIYLLRVQASDGNNTSFWSEEIKFD 303 (414)
T ss_dssp ---SCEEEEEEEESGGGSCCCC--CCCCBCSTTTT-----BSSSEEEEEGGGSCSSEEEEEEEEECSSSEEEECCCEEEE
T ss_pred ---CeEEEEEEEehhccccccccccCceECCCccC-----CCCCEEcCCcccccCccEEEEEEEecCCCccccccccccc
Confidence 359999998630 0000134543211000 012556665 69999999999999999999988765552
Q ss_pred ------cCCCCCCccceeeccceeEEEEE----E------eeEEEEeeeeccCceeeEEEEeCCeEeeecccceeeEEEE
Q psy7040 605 ------TDKPSAPEGPIQWLLTLTDVTWE----I------SNYLQELHSSLMPISLESQYLMNDKRVTIDNVDYFTKITI 668 (716)
Q Consensus 605 ------~~~p~~~~~~~~~~~~~v~l~w~----i------~~y~v~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~i 668 (716)
+.+|. .. +. ...+++.|.|. . .+|.+.|. +.+.+++.............+.|
T Consensus 304 t~~~~~~~pP~-l~-~~-~~~~si~v~W~~P~~~~~~~~~~~~~~~Y~---------v~y~~~~~~~~~~~~~~~~~~~l 371 (414)
T 3se4_A 304 TEIQAFLLPPV-FN-IR-SLSDSFHIYIGAPKQSGNTPVIQDYPLIYE---------IIFWENTSNAERKIIEKKTDVTV 371 (414)
T ss_dssp TTCC----------------------------------------------------------------------------
T ss_pred chhccccCCCe-EE-EE-ECCCeEEEEEECCCCccccchhhcCCeEEE---------EEEEECCCCceEEEEecCCeEEe
Confidence 34444 33 33 34679999998 1 12443332 22222221111111123467999
Q ss_pred ccCCCCCcEEEEEEEEcC----CCCceeeEEEEEecCCC
Q psy7040 669 RPLQRSDTAQYTVTATNS----QGKDQVFIEVVVTDKPS 703 (716)
Q Consensus 669 ~~l~~~~~y~y~~~a~n~----~G~~~~s~~l~v~~~p~ 703 (716)
.+|.+++.|.+++.|.+. .|.+..|..+.+.+.+.
T Consensus 372 ~~L~p~t~Y~~~V~A~~~~~~~~g~g~~S~~~~~~T~~~ 410 (414)
T 3se4_A 372 PNLKPLTVYCVKARAHTMDEKLNKSSVFSDAVCEKTKPG 410 (414)
T ss_dssp ---------------------------------------
T ss_pred CCCCCCCeEEEEEEEEecccccCCCCCCCCCEeEEeCCC
Confidence 999999999999999993 58888887777777554
No 28
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.91 E-value=7.3e-23 Score=217.64 Aligned_cols=452 Identities=13% Similarity=0.087 Sum_probs=250.3
Q ss_pred EEEeCCCCceeEEEEEEecCCCCCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCCCCCeEEccccCcccce
Q psy7040 203 TAENINGKDSVEVEVIVLDKPSPPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEATGRWTPAGETEGPVTG 282 (716)
Q Consensus 203 ~a~n~~g~~~~~~~~~v~~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~ 282 (716)
.+.+..|.....+.|.+..+|.....+-.+....++.++|.|... + .+.+.. .+... . .......
T Consensus 17 ~~~~~~g~~~~~i~l~v~~pP~i~~~~~~~~v~~G~~v~l~C~~~----~----~v~W~~--~~~~~--~---~~~~~~~ 81 (524)
T 2ec8_A 17 LLRVQTGSSQPSVSPGEPSPPSIHPGKSDLIVRVGDEIRLLCTDP----G----FVKWTF--EILDE--T---NENKQNE 81 (524)
T ss_dssp CC--------------CCCCCEEESCCSEEECCTTSCEEEEEECT----T----EEEEEE--ESSSC--C---EEECSSE
T ss_pred hhhhhcCCCCCeEEcCCCCCCccCCCCceEEEeCCCeEEEEEeCC----c----eEEEcC--CCccc--c---ccCccce
Confidence 455666766677777777777432222345556788999999952 2 222222 22211 0 1234688
Q ss_pred EEEcCCCCCCeEEEEEEEEcCCCCCCCCcccceEEecCCCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEE
Q psy7040 283 LEVEGLIPNHKYKFRVRAVNKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIE 362 (716)
Q Consensus 283 ~~i~~L~p~~~y~~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~ 362 (716)
+.|.++...+.+.|+|.|.| |. .....+.+..+...-..+.++.+ ..+..+.|.|..... +. ..+.
T Consensus 82 L~I~~~~~~D~G~Y~C~a~n--g~----~~~~~l~V~~p~~~~~~~~~~~v--~~G~~v~l~C~~~~~----~~--~~v~ 147 (524)
T 2ec8_A 82 WITEKAEATNTGKYTCTNKH--GL----SNSIYVFVRDPAKLFLVDRSLYG--KEDNDTLVRCPLTDP----EV--TNYS 147 (524)
T ss_dssp EEESSCCSTTCEEEEEEETT--SC----EEEEEEECCCSSCSBCCCCCCCE--ETTSCEEECCCBSCC----CC--SCEE
T ss_pred EEEcccchhhCEEEEEeecC--Cc----ceEEEEEECCCCcccccccceEE--EcCCeEEEECcCCCC----cc--ceEE
Confidence 99999999999999999988 42 11212333221111122333333 346678888887321 11 1223
Q ss_pred Eee-cCCC-c-eEEEeeecCCCCeEEecCCCCCCeE-EEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEE
Q psy7040 363 KKE-KYSP-I-WEKCAQTEGDTPKGKVLDLIEGNQY-EFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKV 438 (716)
Q Consensus 363 ~~~-~~~~-~-~~~~~~~~~~~~~~~i~~l~~~~~Y-~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~ 438 (716)
|.. .+.. . ..... ......+.|.++...+.+ .|+|.|.|..|... +.............+|.+... +....+
T Consensus 148 W~~~~g~~l~~~~~~~--~~~~~~L~i~~~~~~d~G~~Y~C~a~n~~~~~~-s~~~~l~V~~~~~~~p~i~~~-~~~~~v 223 (524)
T 2ec8_A 148 LKGCQGKPLPKDLRFI--PDPKAGIMIKSVKRAYHRLCLHCSVDQEGKSVL-SEKFILKVRPAFKAVPVVSVS-KASYLL 223 (524)
T ss_dssp EECSSSCCCCSSCEEE--EETTTEEEEESCCGGGTTCEEEEEEC----CCC-CCCEECCEECCCCSCCEEECS-CSEEEE
T ss_pred EEccCCcCcCCCCcee--ECCCccEEEeccchhhCCceEEEEEEECCceEE-EEEEEEEEEeCCCCCCcEEec-CCcceE
Confidence 321 1100 0 00111 113457899999999999 99999998765432 211111111122346665432 345589
Q ss_pred ecCCeEEEEEEEeccCCCe-EEEEeCCeEe--ccCCcEEEEe---CCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEE
Q psy7040 439 RAGSNFEFDINVIGEPIPT-KEWLCNDITI--ISKDRFKIVN---DDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTA 512 (716)
Q Consensus 439 ~~g~~~~~~~~v~~~p~~~-~~W~~~~~~~--~~~~~~~~~~---~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~ 512 (716)
..|+.+.|.|.+.+.|.+. +.|++++..+ .......+.. ......|.|.++...|.|.|+|.|.|..|......
T Consensus 224 ~~G~~v~L~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~ 303 (524)
T 2ec8_A 224 REGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTT 303 (524)
T ss_dssp ETTSCEEEEEEEEESSTTCEEEEEETTCSCCCCEEEEEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCEEEEEE
T ss_pred EcCCcEEEEEEEecCCCcEEEEEEeCCCCCccccccccccccCCccceEEEEEECCCCHHHCEEEEEEEEecCCceEEEE
Confidence 9999999999999999887 9999998873 3222222221 12356899999999999999999999999988888
Q ss_pred EEEEE---EEEEEEeCC----CCCCCCceeeEEEEEEecCCCcee-eeEEEccceeeeec-----ccc-----ceeEEEE
Q psy7040 513 KVTVL---GCSLKWNPP----EDDGGAPIEYYMVEKMETDTGKVL-IKWIRTNDKRVTID-----NVD-----YFTKITI 574 (716)
Q Consensus 513 ~~~v~---~v~l~W~~p----~~~~~~~i~~y~v~~~~~~~~~~~-~~w~~~~~~~~~~~-----~~~-----~~~~~~i 574 (716)
.+.+. .+.+.-..+ ...+......|.+.. .+.+. +.|++.+....... ... ....+.|
T Consensus 304 ~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~g----~P~p~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~L~i 379 (524)
T 2ec8_A 304 TLEVVDKGFINIFPMINTTVFVNDGENVDLIVEYEA----FPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHL 379 (524)
T ss_dssp EEEEESSCEEEEEESSCSEEEECTTCCEEEEEEEEE----ESCCCEEEEESSSCBCSSSBCCEESCCSSSCCEEEEEEEE
T ss_pred EEEEeccCceEeecCCCceEEEcCCCcEEEEEEEee----cCCCcEEEEEECCeeccCCccceeEEccCCCceeEEEEEE
Confidence 88776 333221110 122223234444432 24455 89998876543221 000 2368999
Q ss_pred cCCCCCCeEEEEEEEEcCCCCCccceeeeccCCCCCCccceeeccceeEEEEEEeeEEEEeeeeccCcee----eEEEEe
Q psy7040 575 RPLQRSDTAQYTVTATNSQGKDQVFIEVVVTDKPSAPEGPIQWLLTLTDVTWEISNYLQELHSSLMPISL----ESQYLM 650 (716)
Q Consensus 575 ~~L~~~~~y~~~v~a~n~~G~~~~s~~~~v~~~p~~~~~~~~~~~~~v~l~w~i~~y~v~~~~~~~~~~~----~~~W~~ 650 (716)
.++...+.+.|+|.|.|..|....+..+.|..+|.... ..... .| .|.|.+.| .+.|++
T Consensus 380 ~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P~i~~-~~~~~----------~g------~l~C~~~g~P~p~i~W~~ 442 (524)
T 2ec8_A 380 TRLKGTEGGTYTFLVSNSDVNAAIAFNVYVNTKPEILT-YDRLV----------NG------MLQCVAAGFPEPTIDWYF 442 (524)
T ss_dssp CSCCGGGCEEEEEEEECSSCEEEEEEEEEECEEEEEEE-EECCS----------SS------CEEEEEEEESCCEEECCC
T ss_pred eecCcccCeEEEEEEEecCceEEEEEEEEEecCCeEee-cccCc----------Cc------EEEEEEEeecCCEEEEEE
Confidence 99999999999999999999866666666766554221 11111 11 37777777 899999
Q ss_pred CCeEeee--------c------ccceeeEE----EEccCCCCCcEEEEEEEEcCCCCceeeEEEEEecCCCCCCCC
Q psy7040 651 NDKRVTI--------D------NVDYFTKI----TIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTDKPSAPEGP 708 (716)
Q Consensus 651 ~~~~~~~--------~------~~~~~~~~----~i~~l~~~~~y~y~~~a~n~~G~~~~s~~l~v~~~p~~p~~p 708 (716)
++..+.. + .......+ .+......|.|.|+|.|.|..|....++.|.|.+++.+...|
T Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~l~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~V~e~~~~~~~~ 518 (524)
T 2ec8_A 443 CPGTEQRCSASVLPVDVQTLNSSGPPFGKLVVQSSIDSSAFKHNGTVECKAYNDVGKTSAYFNFAFKGNNKEQIHP 518 (524)
T ss_dssp C----------CCCCCCCCCCC-CCSSSCEEEEEEECCCSCCC-----CEEECSSCEEECCCCCCC----------
T ss_pred CCCcccccccccCCCCceeeeeccCCCCcceEEEEEEEEEccCCEEEEEEEEcCCCceEEEEEEEEecCCHHHcCc
Confidence 9765521 0 00111222 244444699999999999999999999999999887766443
No 29
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.90 E-value=5.9e-20 Score=198.32 Aligned_cols=414 Identities=11% Similarity=0.046 Sum_probs=246.1
Q ss_pred eEEEEe--cCCccEEEEeccccCcceEEEEEEEeCCCCceeEEEEEEecCCCCCCCCeEEeEEeCCeEEEEEECCCCCCC
Q psy7040 175 VRKVQH--LDYNTKLGVRMAQRADAGFYTVTAENINGKDSVEVEVIVLDKPSPPGGPLKVSNVHAEGVTLDWKVPDDDGG 252 (716)
Q Consensus 175 ~~~~~~--~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~ 252 (716)
|+.+.. ......|.|.+++..|+|.|+|.|.|..|..+..+.|.|..+|.....+.......+..+.|.|......
T Consensus 63 r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~-- 140 (585)
T 2ocw_A 63 RANLTNFPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTEN-- 140 (585)
T ss_pred eEEEEecCCCCEEEEEECCCCcccCEEEEEEcccCCCCceEEEEEEEecCccccCCCccEEEEcCCCEEEEEEecCCC--
Confidence 444443 2344679999999999999999999999998889999999888765544455566788999999964221
Q ss_pred CccceEEEEEEeCC----------------CCCeEEcc-ccCcccceEEEcCCCCCCeEEEEEEEEcCCCCCCCCcccce
Q psy7040 253 QPIEKYVVDKMDEA----------------TGRWTPAG-ETEGPVTGLEVEGLIPNHKYKFRVRAVNKQGKSEPLTTTAS 315 (716)
Q Consensus 253 ~~~~~y~v~~~~~~----------------~~~~~~~~-~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~~~~~~~ 315 (716)
+...+.+...... ..+..... ........+.|.++...+.+.|+|.|.|..|...... .
T Consensus 141 -~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~---~ 216 (585)
T 2ocw_A 141 -AQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNA---D 216 (585)
T ss_pred -CCccEEEEECCCCCceEEecCCcccCccccCcEEEEeccCCCcEEEEEEccCChhHCeEEEEEeccCCccccceE---E
Confidence 1122222221110 00000000 0011123799999999999999999998777532211 1
Q ss_pred EEecCCCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEe-ecCC----------------CceEEEee-e
Q psy7040 316 IEAKNPFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKK-EKYS----------------PIWEKCAQ-T 377 (716)
Q Consensus 316 ~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~-~~~~----------------~~~~~~~~-~ 377 (716)
+.+.. .+|..+. ...+..+.|.|.. ..... . .-.+.|. ..+. ........ .
T Consensus 217 l~V~~-----~~p~~~~--~~~G~~v~l~C~~-~~~~~-~--~~~~~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (585)
T 2ocw_A 217 LQVLK-----PEPELVY--EDLRGSVTFHCAL-GPEVA-N--VAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQD 285 (585)
T ss_pred EEEcc-----CCCceeE--EcCCCcEEEEEEc-CCCCC-C--ceEEEEEeCCCCCcceEEeCCCcCCcccCCceEeeccC
Confidence 22221 1232222 2345667777764 11110 1 0122222 1110 00000000 0
Q ss_pred cCCCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCC--CCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccCC
Q psy7040 378 EGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSD--PTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPI 455 (716)
Q Consensus 378 ~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~--~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~ 455 (716)
......+.|.++...+.+.|+|.|.|. |....+. ......+. .+|.+. ..+..+.+..|..+.|.|.+.+.|.
T Consensus 286 ~~g~~~L~i~~v~~~d~G~Y~C~a~n~-g~~~~~~~~~~~~l~V~---~~p~~~-~~~~~~~~~~G~~v~l~C~~~~~p~ 360 (585)
T 2ocw_A 286 KDGSFSVVITGLRKEDAGRYLCGAHSD-GQLQEGSPIQAWQLFVN---EESTIP-RSPTVVKGVAGSSVAVLCPYNRKES 360 (585)
T ss_pred CCcEEEEEEccCChhhCEEEEEEEEcC-CCccccCceeeEEEEEe---cccccc-cCCcceEEEeCCcEEEEEecCCCCC
Confidence 011226889999999999999999995 4332211 11111121 234443 2346778889999999999999999
Q ss_pred CeE----EEEe--CCe--Eecc---------CCcEEEEeC--CCeEEEEECCCCCCCceeEEEEEEcCCCceeeEEEEEE
Q psy7040 456 PTK----EWLC--NDI--TIIS---------KDRFKIVND--DKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTV 516 (716)
Q Consensus 456 ~~~----~W~~--~~~--~~~~---------~~~~~~~~~--~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v 516 (716)
+.+ .|++ ++. .+.. ..++.+... .....|.|.++...|.|.|+|.| |..|....++.+.+
T Consensus 361 p~i~~w~~W~~~~~g~~~~l~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a-n~~g~~~~~~~l~V 439 (585)
T 2ocw_A 361 KSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLT-NGDTLWRTTVEIKI 439 (585)
T ss_pred ccEEEEEEEEccCCCCCceeeeecceeecccCCCEEEeccCCCcEEEEEECCCChhhCEEEEEcc-cCCCccceeEEEEE
Confidence 987 7999 776 3322 234444432 23346999999999999999999 88876655554444
Q ss_pred EEEEEEEeCCCCCCCCceeeEEEEEEecCCCceeeeEEEccceeeeeccccceeEEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy7040 517 LGCSLKWNPPEDDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDNVDYFTKITIRPLQRSDTAQYTVTATNSQGKD 596 (716)
Q Consensus 517 ~~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~G~~ 596 (716)
.. .+|. +. . . ... .+..|..-.+.|.+....
T Consensus 440 ~~-----~~p~------~~---~-----~------------------------~~~---~v~~G~~v~L~C~~~~~~--- 470 (585)
T 2ocw_A 440 IE-----GEPN------LK---V-----P------------------------GNV---TAVLGETLKVPCHFPCKF--- 470 (585)
T ss_pred ec-----Cccc------cc---c-----C------------------------Cce---eEecCCcEEEEEEecCCC---
Confidence 31 0110 00 0 0 000 122344455666653100
Q ss_pred ccceeeeccCCCCCCccceeeccceeEEEEEEeeEEEEeeeeccCceeeEEEEeCCeEeeecc-------------ccee
Q psy7040 597 QVFIEVVVTDKPSAPEGPIQWLLTLTDVTWEISNYLQELHSSLMPISLESQYLMNDKRVTIDN-------------VDYF 663 (716)
Q Consensus 597 ~~s~~~~v~~~p~~~~~~~~~~~~~v~l~w~i~~y~v~~~~~~~~~~~~~~W~~~~~~~~~~~-------------~~~~ 663 (716)
+..|. . .+.|+++|..+.... .+..
T Consensus 471 -----------~~~p~-------------------------~------~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~ 508 (585)
T 2ocw_A 471 -----------SSYEK-------------------------Y------WCKWNNTGCQALPSQDEGPSKAFVNCDENSRL 508 (585)
T ss_pred -----------CCCcc-------------------------E------EEEEeecCceeeeccCCCCCcceEEecCcccE
Confidence 01111 0 467888887664331 1223
Q ss_pred eEEEEccCCCCCcEEEEEEEEcCCCCceee-EEEEEecCC
Q psy7040 664 TKITIRPLQRSDTAQYTVTATNSQGKDQVF-IEVVVTDKP 702 (716)
Q Consensus 664 ~~~~i~~l~~~~~y~y~~~a~n~~G~~~~s-~~l~v~~~p 702 (716)
..|.|.++...|+|.|+|.|.|..|.+... ..|.|..+|
T Consensus 509 ~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~~l~V~~~p 548 (585)
T 2ocw_A 509 VSLTLNLVTRADEGWYWCGVKQGHFYGETAAVYVAVEERK 548 (585)
T ss_pred EEEEECCCCcccCeEEEEEeEeCCCccEEEEEEEEEEeee
Confidence 689999999999999999999999987644 889999987
No 30
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=99.90 E-value=1.5e-24 Score=242.07 Aligned_cols=350 Identities=12% Similarity=0.071 Sum_probs=199.4
Q ss_pred eEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeC--------------CCCCeEEccccCc---------ccceEEEc
Q psy7040 230 LKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDE--------------ATGRWTPAGETEG---------PVTGLEVE 286 (716)
Q Consensus 230 ~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~--------------~~~~~~~~~~~~~---------~~~~~~i~ 286 (716)
+.+.....+++.|+|++|..+++.++.+|.|+++.. +...|........ ....+.+.
T Consensus 475 l~v~~~s~~sv~LsW~~p~~~~~~~i~gY~V~y~~~~~~n~t~~~~~~~c~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~ 554 (897)
T 2dtg_E 475 FSYIRTSFDKILLRWEPYWPPDFRDLLGFMLFYKEAPYQNVTEFDGQDACGSNSWTVVDIDPPLRSNDPKSQNHPGWLMR 554 (897)
T ss_dssp CSEEEECSSCEEEECCCCCSSSCCCEEEECCCSSSCCTTTCCCCCCCCCSCCCCCCCCCSCCEEEECCCCSSSCCEEEEC
T ss_pred EEEEEEecCeEEEEecCCCCCCCceeeeEEEEEEeCCCCCcccccCccccCCCcceEEecCCCccccccccccccceEeC
Confidence 678889999999999998766677899999998764 2345654432211 25789999
Q ss_pred CCCCCCeEEEEEEE-EcCCCCCC-CCcccceEEecCCCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEe
Q psy7040 287 GLIPNHKYKFRVRA-VNKQGKSE-PLTTTASIEAKNPFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKK 364 (716)
Q Consensus 287 ~L~p~~~y~~~v~a-~n~~g~~~-~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~ 364 (716)
+|.|++.|.|+|.| .|..|.+. .+..+..+.+.+...+|.+|.++.+...+.+++.|+|.+|..++| .|.+|.|+|+
T Consensus 555 ~L~P~T~Y~~~V~A~~n~~G~~~~~~~~S~~v~~~T~~~~Ps~P~~l~~~~~s~tsI~LsW~pP~~~nG-~I~~Y~V~~~ 633 (897)
T 2dtg_E 555 GLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTDATNPSVPLDPISVSNSSSQIILKWKPPSDPNG-NITHYLVFWE 633 (897)
T ss_dssp SCCSSCBCCBEEEECCCCCSSCCCCCCBCCCBCCBCCCCCCCCCEEEEEEECSSSCEEEEEECCCCSSS-SCSEEECCEE
T ss_pred CCCCCcEEEEEEEEEEeccCCccccCCccceEEEECCCCCCcCCcceEEEeCCCCEEEEEEeCCCCCCC-CeeEEEEEEE
Confidence 99999999999999 89888631 122233355566667899999999999999999999999866555 6999999998
Q ss_pred ecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeE
Q psy7040 365 EKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNF 444 (716)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~ 444 (716)
........ . .........|.|++.|.|+|.|.+..+.+..+...........+..|. .+.... .
T Consensus 634 ~~~~~~~~-----~-~~~~~~~~~l~p~t~Y~~~V~A~~~~~~s~~~~~~~~~~~~~~p~~p~-------~~~~~~---~ 697 (897)
T 2dtg_E 634 RQAEDSEL-----F-ELDYCLKGLKLPSRTWSPPFESEDSQKHNQSEYEDSAGECCSCPKTDS-------QILKEL---E 697 (897)
T ss_dssp EECCCCSC-----T-TCSSSCSCCCCCC----------------------------------------------------
T ss_pred ECCCCccc-----e-ecccccCCCcCCccccceeeecccccCcccccccccCCCccCCcCccc-------chhhhh---h
Confidence 76532210 0 111122345889999999999999877654432111111111111111 011100 1
Q ss_pred EEEEEEeccCCCe-EEEEeC-Ce---Eec---c----CCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceee--
Q psy7040 445 EFDINVIGEPIPT-KEWLCN-DI---TII---S----KDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKG-- 510 (716)
Q Consensus 445 ~~~~~v~~~p~~~-~~W~~~-~~---~~~---~----~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~-- 510 (716)
.-.+.+.|.+... ..+... .. .+. . ...+.+...+....+.|.+|.+++.|.|+|.|.|..|.+..
T Consensus 698 ~~s~~~~W~~~~~n~v~~~~p~~~r~~l~~~~n~t~~~~~~~~~~~~~~t~~~i~gL~p~t~Y~~~V~A~n~~G~g~~~s 777 (897)
T 2dtg_E 698 ESSFRKTFEDYLHNVVFVPRPSRKRRSLGDVGNAGNNEEHRPFEKVVNKESLVISGLRHFTGYRIELQACNQDTPEERCS 777 (897)
T ss_dssp --------------------------------------CCSCSCEECSCSEEEECSSCSSCEEEECCEEESCSSSSCCBC
T ss_pred hhheeeeEEEccCceEEccCCCcccccccccccccCccccceEEecCCceEEEECCCCCCcEEEEEEEEEeCCCCCCCCC
Confidence 1122234433221 000000 00 000 0 00000011223468999999999999999999999886431
Q ss_pred -EEEEEEE----------------------EEEEEEeCCCCCCCCceeeEEEEEEecCCCceeeeEEEccceeeeecccc
Q psy7040 511 -TAKVTVL----------------------GCSLKWNPPEDDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDNVD 567 (716)
Q Consensus 511 -s~~~~v~----------------------~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 567 (716)
+..+.+. ++.|+|++|...+|. |.+|.|+|+.... .....+... ....
T Consensus 778 ~s~~v~~~T~~~~~~p~~P~~l~~~~~~~~sv~LsW~~P~~~nG~-I~~Y~V~y~~~~~-~~~~~~~~~-------~~~~ 848 (897)
T 2dtg_E 778 VAAYVSARTMPEAKADDIVGPVTHEIFENNVVHLMWQEPKEPNGL-IVLYEVSYRRYGD-EELHLCDTR-------KHFA 848 (897)
T ss_dssp CCCCEEEECCCCCCCCCCCCCCCCCSSSSSCCCCCCCCCCSCSSC-EEEECCCCBSSSB-CCCCCCCCS-------SSCC
T ss_pred CCceeEEeccCccCCCCCCcceEEEeCCCCEEEEEECCCCCCCCC-EEEEEEEEEECCC-cceEEEEee-------eeec
Confidence 2212211 799999999876665 9999999987653 100011000 0001
Q ss_pred ceeEEEEcCCCCCCeEEEEEEEEcCCCCCccceeeeccC
Q psy7040 568 YFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTD 606 (716)
Q Consensus 568 ~~~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~~~~v~~ 606 (716)
....+.+.+|.|+ .|.|+|+|.|.+|.|+++..+.+..
T Consensus 849 ~~~~~~l~~L~pg-tY~~rV~A~n~~G~G~~S~~v~~~T 886 (897)
T 2dtg_E 849 LERGCRLRGLSPG-NYSVRIRATSLAGNGSWTEPTYFYV 886 (897)
T ss_dssp CTTCCCCCSCCSS-EECCCCCEEETTBCCCCCCCCEECC
T ss_pred ccCcEEECCCCCC-cEEEEEEEEeCCcccCCCCCEEEEe
Confidence 2377899999999 6999999999999999998888533
No 31
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=99.90 E-value=2.4e-22 Score=196.62 Aligned_cols=229 Identities=15% Similarity=0.136 Sum_probs=175.4
Q ss_pred CccEEEEeccccCcceEEEEEEEeCCCCc---eeEEEEEEecCCCCCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEE
Q psy7040 183 YNTKLGVRMAQRADAGFYTVTAENINGKD---SVEVEVIVLDKPSPPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYV 259 (716)
Q Consensus 183 ~~~~l~i~~l~~~~~g~y~c~a~n~~g~~---~~~~~~~v~~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~ 259 (716)
....|.|.++... .|.|+|.|.|. |.. ...+.+.+..+|.+|.+ +.+.....++++|+|.+|.+. + ...+|.
T Consensus 63 ~~~~L~i~~~~~~-~g~Y~C~a~~~-g~~~~~~~~~~l~v~~~P~~P~~-l~~~~~~~~~v~l~W~~~~~~-~-~~~~Y~ 137 (303)
T 1i1r_A 63 TASSVTFTDIASL-NIQLTCNILTF-GQLEQNVYGITIISGLPPEKPKN-LSCIVNEGKKMRCEWDGGRET-H-LETNFT 137 (303)
T ss_dssp TEEEEEECSCCCS-EEEEEEEEEET-TTEEEEEEEEEEEEECCCCCCEE-EEEEEETTSCCEEEEECCSCC-S-SCCEEE
T ss_pred cEEEEEEcCcCCC-ceEEEEecccC-CCcceEEEEEEEeccCCCCCCee-eEEEECCCCcEEEEccCCCCC-C-CCcCEE
Confidence 3568999999998 49999999884 442 34466778889999988 788777778999999987654 3 357999
Q ss_pred EEEEeCCCCCeEEccccCcccceEEEcCC-CCCCeEEEEEEEEcCCCCCCCCcccceEEecCCCCCCCCCCCcEEEee--
Q psy7040 260 VDKMDEATGRWTPAGETEGPVTGLEVEGL-IPNHKYKFRVRAVNKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDF-- 336 (716)
Q Consensus 260 v~~~~~~~~~~~~~~~~~~~~~~~~i~~L-~p~~~y~~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~-- 336 (716)
|+++......| .+.........+.|.+| .+++.|.|+|.|.|..|.+.++... ........|.+|.++.+...
T Consensus 138 v~~~~~~~~~~-~~~~~~~~~~~~~i~~L~~p~t~Y~f~V~A~N~~G~~~s~~~~---~~~~~~~~p~pP~~~~v~~~~~ 213 (303)
T 1i1r_A 138 LKSEWATHKFA-DCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVTSDHIN---FDPVYKVKPNPPHNLSVINSEE 213 (303)
T ss_dssp EEEEETTEECC-CEECCSSCTTEEECSSCCCTTSCEEEEEEEEETTEEEECCCEE---ECGGGGEECCCCEEEEEECCSS
T ss_pred EEEEecCCCCc-cCCCcCCCceEEEECCcCcccccEEEEEEEEcCCCCcccCCEE---ECHHHeEecCCCcceEEEEecC
Confidence 99876543222 22223355689999999 9999999999999999987532221 11111245788888888754
Q ss_pred eCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeee--cCCCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCC
Q psy7040 337 DTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQT--EGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPT 414 (716)
Q Consensus 337 ~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~--~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~ 414 (716)
+.+++.|+|.+|...+ +.+.+|+|+|+..+...|...... ......+.|.+|.+++.|.|+|+|.|..|.|.+|+++
T Consensus 214 ~~~sv~l~W~~p~~~~-~~i~~Y~v~y~~~~~~~w~~~~~~~~~~~~~~~~l~~L~p~t~Y~~rV~A~n~~G~G~~S~wS 292 (303)
T 1i1r_A 214 LSSILKLTWTNPSIKS-VIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWS 292 (303)
T ss_dssp SSSCEEEEEECCGGGG-TSCEEEEEEEEETTCSSCEECCGGGGCSCCSEEEECSCCTTCEEEEEEEEEETTSCSCCCCCC
T ss_pred CCCEEEEEECCCCCCC-cccEEEEEEEEeCCCCCceEEccccCCCceeEEEeCCCCCCCEEEEEEEeccCCCCCCcCCCC
Confidence 6689999999987654 479999999999877778765432 4566889999999999999999999999999999888
Q ss_pred CceEeec
Q psy7040 415 APHIARA 421 (716)
Q Consensus 415 ~~~~~~~ 421 (716)
......+
T Consensus 293 ~~~~~~T 299 (303)
T 1i1r_A 293 EEASGIT 299 (303)
T ss_dssp CCEEEEC
T ss_pred CccceeC
Confidence 7665543
No 32
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=99.90 E-value=1.7e-22 Score=196.71 Aligned_cols=274 Identities=19% Similarity=0.178 Sum_probs=178.3
Q ss_pred cCCCCCCCCeEEeEE-----eCCeEEEEEECCC-CCCCCccceEEEEEEeCCCCCeEEccccCcccceEEEcCCCCCCeE
Q psy7040 221 DKPSPPGGPLKVSNV-----HAEGVTLDWKVPD-DDGGQPIEKYVVDKMDEATGRWTPAGETEGPVTGLEVEGLIPNHKY 294 (716)
Q Consensus 221 ~~p~~p~~~~~~~~~-----~~~~~~l~W~~p~-~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y 294 (716)
++|..|.+ +..... +.+++.|.|+++. ...+.++.+|.|++.......+. . ......+.+|.+++.|
T Consensus 2 ~~Ps~p~~-~~~~~~~~~~~g~~sv~l~W~p~~~~~~~g~i~~Y~V~~~~~~~~~~~-~-----~~~~~~~~~l~p~t~Y 74 (290)
T 3l5i_A 2 DRPSKAPS-FWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSHLQN-Y-----TVNATKLTVNLTNDRY 74 (290)
T ss_dssp CCCSSCCC-EEEEEEECSSTTCEEEEEEECCCCHHHHCSCEEEEEEEEEETTSCCEE-E-----EESSSEEEEEECSSCE
T ss_pred CCCCCCCc-eeEEecccccCCCceEEEEEccCCchhcCCceEeEEEEEEeCCcCcee-E-----ecCCcEEEEEcCCceE
Confidence 46766666 444332 2589999999733 22344789999999876554321 1 1234466789999999
Q ss_pred EEEEEEEcCCCCCCCCcccceEEecCCCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCC-----
Q psy7040 295 KFRVRAVNKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSP----- 369 (716)
Q Consensus 295 ~~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~----- 369 (716)
.|+|.|.|..|.+.++.. ........+|.++.++.+.... +++.|+|.+|.. .+.+|.|+|+..+..
T Consensus 75 ~~~V~A~n~~G~s~~s~~---~~~~~~~~~~~p~~~~~~~~~~-~si~l~W~~p~~----~i~~Y~v~~~~~~~~~~~~~ 146 (290)
T 3l5i_A 75 LATLTVRNLVGKSDAAVL---TIPACDFQATHPVMDLKAFPKD-NMLWVEWTTPRE----SVKKYILEWCVLSDKAPCIT 146 (290)
T ss_dssp EEEEEEEESSCBCCCEEE---EECCTTCCCCCCCEEEEEEEET-TEEEEEEECCSS----CCCEEEEEEEEECSSSCCCC
T ss_pred EEEEEEEcCCCCCCCceE---EeecccccCCCccceeEEEeCC-CeEEEEEeCCCC----CCCcEEEEEEECCCCCCCCc
Confidence 999999999998755522 2222212345566677776654 799999999643 589999999876533
Q ss_pred ceEEEeeecCCCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEE
Q psy7040 370 IWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDIN 449 (716)
Q Consensus 370 ~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~ 449 (716)
.|... .......+.+.+|.+++.|.|+|+|.|..|.|.... ........+|...
T Consensus 147 ~~~~~--~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~g~g~~~~----~~~~t~~~~P~~~-------------------- 200 (290)
T 3l5i_A 147 DWQQE--DGTVHRTYLRGNLAESKCYLITVTPVYADGPGSPES----IKAYLKQAPPSKG-------------------- 200 (290)
T ss_dssp EEEEE--ETTCSEEECCSCCCTTCEEEEEEEEEETTEECCCEE----EEEESSCCCCSSC--------------------
T ss_pred CeEEc--cCCCcceEEecCcCCccEEEEEEEEEeCCcccccEE----EEeEccccCCCCC--------------------
Confidence 24433 245566788899999999999999999999876311 1111111112100
Q ss_pred EeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEEEEEEEEEEEEEeCCC-C
Q psy7040 450 VIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVLGCSLKWNPPE-D 528 (716)
Q Consensus 450 v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v~~v~l~W~~p~-~ 528 (716)
+. +.+..+... ++.|+|+++. .
T Consensus 201 ------p~--------------------------~~~~~~~~~-------------------------sv~l~W~~~~~~ 223 (290)
T 3l5i_A 201 ------PT--------------------------VRTKKVGKN-------------------------EAVLEWDQLPVD 223 (290)
T ss_dssp ------CC--------------------------EEEEEECSS-------------------------CEEEEECCCCHH
T ss_pred ------Ce--------------------------eeEeeccCC-------------------------EEEEEEcCCChh
Confidence 00 000000011 7999999532 2
Q ss_pred CCCCceeeEEEEEEecCCCceeeeEEEccceeeeeccccceeEEEEcCCCCCCeEEEEEEEEcCCCCCccceeeecc
Q psy7040 529 DGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDNVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVT 605 (716)
Q Consensus 529 ~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~~~~v~ 605 (716)
..++.+.+|.|++..... . |.... .......+.|.+|.+++.|.|+|+|.|..| |..+..+.+.
T Consensus 224 ~~~g~i~~Y~v~~~~~~~----~-~~~~~-------~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~G-g~~s~~~~~~ 287 (290)
T 3l5i_A 224 VQNGFIRNYTIFYRTIIG----N-ETAVN-------VDSSHTEYTLSSLTSDTLYMVRMAAYTDEG-GKDGPEFTFT 287 (290)
T ss_dssp HHSSCCCEEEEEEEETTS----C-CEEEE-------EETTCSEEEECSCCTTCEEEEEEEEEETTE-EEECCCEEEE
T ss_pred ccCCEEEEEEEEEEeCCC----C-eEEEE-------eCCCceEEEeCCCCCCCEEEEEEEEEeCCC-CCCCCceEee
Confidence 234569999999998754 1 21110 011238999999999999999999999999 7776665543
No 33
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=99.89 E-value=1.6e-21 Score=177.87 Aligned_cols=193 Identities=36% Similarity=0.636 Sum_probs=162.2
Q ss_pred ecCCCCCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCCCCCeEEccccCcccceEEEcCCCCCCeEEEEEE
Q psy7040 220 LDKPSPPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEATGRWTPAGETEGPVTGLEVEGLIPNHKYKFRVR 299 (716)
Q Consensus 220 ~~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~ 299 (716)
.++|.+|.+ +.+.....+++.|+|++|..+++.++.+|.|+++..+...|...... .....+.+.+|.|++.|.|+|+
T Consensus 3 ~~~P~~P~~-l~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-~~~~~~~~~~L~p~t~Y~~~V~ 80 (197)
T 3lpw_A 3 MDTPGPPQD-LKVKEVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVATN-CHKTSWKVDQLQEGCSYYFRVL 80 (197)
T ss_dssp CCSCCCCEE-EEEEEECSSCEEEEEECCSCCTTSCCCEEEEEEEETTCSSCEEEEEE-ECSSEEEECCCCTTCEEEEEEE
T ss_pred CCCCCCCCC-cEEEEecCCEEEEEEcCCccCCCCcccEEEEEEEECCCCccEEeecC-CCccEEEEcCCCCCCEEEEEEE
Confidence 467888887 88888999999999999877777789999999998877777665432 4578999999999999999999
Q ss_pred EEcCCCCCCCCcccceEEecCCCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecC
Q psy7040 300 AVNKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEG 379 (716)
Q Consensus 300 a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~ 379 (716)
|.|..|.+.++......+.. ..|.+|.++.+...+.+++.|+|.+|..++++.+.+|.|+++..+...|..... .
T Consensus 81 a~~~~g~~~~s~~~~~~t~~---~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~--~ 155 (197)
T 3lpw_A 81 AENEYGIGLPAETAESVKAS---ERPLPPGKITLMDVTRNSVSLSWEKPEHDGGSRILGYIVEMQTKGSDKWATCAT--V 155 (197)
T ss_dssp EEETTEECCCEECSSCEESC---CCCCCCSCEEEEEECSSCEEEEECCCSCCTTSCCCEEEEEEEETTCSCCEEEEE--E
T ss_pred EEcCccccCCCCCccceecC---CCCCCCcccEEEeccCCeEEEEecCCCcCCCCcccEEEEEEEeCCCCceEEeec--c
Confidence 99999988776655444433 567889999999899999999999988777668999999999887677766543 4
Q ss_pred CCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEe
Q psy7040 380 DTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIA 419 (716)
Q Consensus 380 ~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~ 419 (716)
...++.+.+|.+++.|.|+|+|.|..|.|.++..+..++.
T Consensus 156 ~~~~~~~~~L~p~t~Y~~~V~A~n~~G~s~~S~~s~~v~~ 195 (197)
T 3lpw_A 156 KVTEATITGLIQGEEYSFRVSAQNEKGISDPRQLSVPVIA 195 (197)
T ss_dssp SSSEEEECCCCTTCEEEEEEEEEETTEECCCEECSSCEEC
T ss_pred cccEEEeCCcCCCCEEEEEEEEEeCCccCCCccCcccEec
Confidence 6788999999999999999999999999998877666554
No 34
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=99.88 E-value=9.3e-22 Score=180.88 Aligned_cols=191 Identities=21% Similarity=0.330 Sum_probs=152.9
Q ss_pred EEEecCCCCCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCCCCCeEEcccc---CcccceEEEcCCCCCCe
Q psy7040 217 VIVLDKPSPPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEATGRWTPAGET---EGPVTGLEVEGLIPNHK 293 (716)
Q Consensus 217 ~~v~~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~---~~~~~~~~i~~L~p~~~ 293 (716)
+...++|.+|.+ +.+..... ++.|+|++|..++|.++.+|.|+++..+...|...... ......+.+.+|.|++.
T Consensus 3 l~~~~~P~~P~~-~~~~~~~~-s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~ 80 (209)
T 2vkw_A 3 LAQADTPSSPSI-DQVEPYSS-TAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETT 80 (209)
T ss_dssp --CCCCCCCCEE-EEEEECSS-CEEEEEECCSCCCSSCCCEEEEEEEESSCCCCEEEEEEHHHHHHHSEEEECCCCTTCE
T ss_pred ccccCCCcCCcc-cEeeeccC-eEEEEEcCCCcCCCcceeEEEEEEeeCCCCCceEeEeeccCCCccceEEeCCCCCCCe
Confidence 445678888887 77777666 79999999877788789999999998887888765432 13357899999999999
Q ss_pred EEEEEEEEcCCCCCCCCcccceEEecCCCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEE
Q psy7040 294 YKFRVRAVNKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEK 373 (716)
Q Consensus 294 y~~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~ 373 (716)
|.|+|+|.|..|.+.++......+ .+...|.+|.++.+...+.+++.|+|.+| .+.++.+.+|.|+|+. ....|..
T Consensus 81 Y~~~V~A~n~~G~~~~s~~~~~~T--~~~~~P~~P~~~~~~~~~~~sv~l~W~~p-~~~~~~i~~Y~v~~~~-~~~~~~~ 156 (209)
T 2vkw_A 81 YAVRLAALNGKGLGEISAASEFKT--QPVREPSAPKLEGQMGEDGNSIKVNLIKQ-DDGGSPIRHYLVRYRA-LSSEWKP 156 (209)
T ss_dssp EEEEEEEEETTEECCCCCCEEEEC--CCSCSCCCCEEEEEECTTSSCEEEEEECC-CCTTSCCCEEEEEEEE-TTSCCCC
T ss_pred EEEEEEEEcCCcccCCcccccccc--cCCCCCCCCcccccccccCCeEEEEEECc-ccCCCCCceEEEEEEC-CCCCCce
Confidence 999999999999887776653222 12226888888888888899999999998 4456689999999998 4466766
Q ss_pred EeeecCCCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCC
Q psy7040 374 CAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDP 413 (716)
Q Consensus 374 ~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~ 413 (716)
.........++.|.+|.+++.|.|+|+|.|..|.|.++..
T Consensus 157 ~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~~S~~ 196 (209)
T 2vkw_A 157 EIRLPSGSDHVMLKSLDWNAEYEVYVVAENQQGKSKAAHF 196 (209)
T ss_dssp CEEECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCEEE
T ss_pred eeecCCCccEEEecCCCCCCEEEEEEEEEeCCccCCcchh
Confidence 5556667789999999999999999999999999887654
No 35
>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus}
Probab=99.88 E-value=8.1e-21 Score=193.44 Aligned_cols=389 Identities=12% Similarity=0.030 Sum_probs=237.9
Q ss_pred CCCcEEEEEeCCeEEEEeeCCCCCCCcceeeEEEEEcc------------------------------------------
Q psy7040 16 EGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKDR------------------------------------------ 53 (716)
Q Consensus 16 ~~~l~~~~~~~~~~~~~W~~p~~~~~~~~~~y~~~~~~------------------------------------------ 53 (716)
+.+|++.--+-.....+|+.|...+. -..|.+-+..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (488)
T 2q7n_A 7 DKDLKCTTNNMRVWDCTWPAPLGVSP--GTVKDICIKDRFHSCHPLETTNVKIPALSPGDHEVTINYLNGFQSKFTLNEK 84 (488)
T ss_dssp --CCCCEESSSSEEEEECCCCSSSCC--SCEEEEEEESSSEEEEECSSSEEEEECCCSSCEEEEEEESSSCEEEEEECST
T ss_pred CccceeEecCceEEEEeeeCcCccCC--CceEEEEEecCCceeEEeccceeEcccCCCCcceEEEeeccCceeEEEEecC
Confidence 34667777777788889998865443 2233333332
Q ss_pred C----CCCCCCceEEEE-eCCeEEEEecCCCCCCCCc-cceEEEEEEcCCCC--cEEEecccC---C---CeEEecCC--
Q psy7040 54 G----LDPEGPLEVSNI-HKDGCTLKWNKPKDDGGEP-LEGYLVEKYDPETG--VWIPVGKTR---E---PEMDVTGL-- 117 (716)
Q Consensus 54 ~----~~p~~~l~~~~~-~~~s~~l~W~~p~~~~~~~-i~~y~v~~~~~~~~--~~~~~~~~~---~---~~~~i~~L-- 117 (716)
. +.||..|.+... ....+.|+|..+...-..+ ...|.|++...... -|....... . ....-..+
T Consensus 85 ~~~~~p~~p~~l~~~~~~~~~~l~~~W~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~w~w~s~~p 164 (488)
T 2q7n_A 85 DVSLIPETPEILDLSADFFTSSLLLKWNDRGSALPHPSNATWEIKVLQNPRTEPVALVLLNTMLSGKDTVQHWNWTSDLP 164 (488)
T ss_dssp TCEECCCCCCEEECCEETTTTEEEEEECBCGGGSCSSEEEEEEEECCCSSSSCSCCCEECCEECSSSCBCCEEEEECSSC
T ss_pred ccccCCCCCeeEEEEEecCCCeEEEEEeCCCccccccCCeEEEEEEEEeccceEEEEEEEEEEecCCCceeEeeccCCCc
Confidence 1 233333444544 4679999998764210111 24588876443321 132211110 0 11122222
Q ss_pred CCCcEEEEEEEEEe----cCc---cCCCccccceEEe------cCCCCcc--cccccccceecccCCC------CCCceE
Q psy7040 118 TPGHEYKFRVKALN----KEG---ESEPLETFSSIIA------RDPYSKY--TSVSSLDSHKRSNQPC------GSGMVR 176 (716)
Q Consensus 118 ~~~~~y~~~v~a~~----~~g---~~~~s~~~~~~~~------~~p~~~~--~~~~~~~~~~~~~~p~------G~~~~~ 176 (716)
..+..|.++||+.. -.| +|.+|........ ..|.... .+....+.|.+. .+. |..-..
T Consensus 165 l~c~~~~v~iR~~~~~~~~~~~~~ws~Ws~~~~~~~~~~t~i~v~P~~~~v~~Gs~vtl~C~a~-~~~I~W~~ng~~i~~ 243 (488)
T 2q7n_A 165 LQCATHSVSIRWHIDSPHFSGYKEWSDWSPLKNISWIRNTETNVFPQDKVVLAGSNMTICCMSP-TKVLSGQIGNTLRPL 243 (488)
T ss_dssp CSSSCCEEEEEEEECCTTCCSCBCCCCCCCCEECCCCCCSSCCEECTTCEEESSCCCEEEECCS-SCEEEEEETTEECCC
T ss_pred ccccceEEEEEEEeccccccCCCCCcCCCChhhcCCcCCCceEECCCCCEEcCCCCEEEEEECC-CCEEEEEECCEECch
Confidence 33889999999985 223 5555544332110 1111111 122233456665 221 311000
Q ss_pred EEEecCCccEEEEeccccCcceEEEEEEEeCCCCceeEEEEEEecCCCCCCCCeEEeEEeCCeEEEEEECCCCC--CCCc
Q psy7040 177 KVQHLDYNTKLGVRMAQRADAGFYTVTAENINGKDSVEVEVIVLDKPSPPGGPLKVSNVHAEGVTLDWKVPDDD--GGQP 254 (716)
Q Consensus 177 ~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~--~~~~ 254 (716)
. ...+....|+|.++...|+|.|.|.+.+ +.....+.+.+..+|.+|.+ +.+.......++++|.++... +|.+
T Consensus 244 ~-ri~~~~~~L~I~nl~~sd~g~y~~~C~~--~~~i~~~~l~v~~pP~~P~n-l~C~~~~~~svtcsW~pg~~~~l~G~~ 319 (488)
T 2q7n_A 244 I-HLYGQTVAIHILNIPVSENSGTNIIFIT--DDDVYGTVVFAGYPPDVPQK-LSCETHDLKEIICSWNPGRITGLVGPR 319 (488)
T ss_dssp E-ECSSSCEEEECCSCCCCCSSCEEEEEEE--SSCEEEEEEEEECCCCCCCS-CEEEBSSSSEEEEEECCCSCCCCCTTS
T ss_pred h-hccceEEEEEEeCCCcccCCcEEEEEEc--CCeEEEEEEEeeCCCCCCcc-cEEEEcCCCEEEEEEeCCCcCCCCCCC
Confidence 0 1345678899999999999888887773 33345788889999999998 788777889999999987654 3457
Q ss_pred cceEEEEEEeCCCC-CeEEccccCcccceEEEcCCCCCCeEEEEEEEEcCCCCCCCCcccceEEecCCCCCCCCCCCcEE
Q psy7040 255 IEKYVVDKMDEATG-RWTPAGETEGPVTGLEVEGLIPNHKYKFRVRAVNKQGKSEPLTTTASIEAKNPFNQPGKPGTPEI 333 (716)
Q Consensus 255 ~~~y~v~~~~~~~~-~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~ 333 (716)
...|.+.+...+.. .|..+....+....+.+..+...+.|.|+|.|.|..|... + . ..........|.+|.++.+
T Consensus 320 ~t~Y~L~y~~~g~~~~c~~~~~~~~~~~~ct~~l~~~~t~Y~f~V~A~N~~G~~~-S-~--~~~~~~~~v~P~PP~nl~v 395 (488)
T 2q7n_A 320 NTEYTLFESISGKSAVFHRIEGLTNETYRLGVQMHPGQEIHNFTLTGRNPLGQAQ-S-A--VVINVTERVAPHDPTSLKV 395 (488)
T ss_dssp SCEEEEEETTTCCEEEEECSSCCCSSCEEEEEECCSSCCCCEEEEEEEETTEEEE-E-E--EECCGGGTBCCCCCEEEEE
T ss_pred ceeEEEEEEECCCCCCCccccccCCceEEEEEcCCCCccEEEEEEEEEeCCCCcc-c-e--EEEEecCCCCCCCCeEEEE
Confidence 88999998654322 2332222113345677765555699999999999998743 2 1 1111122356889999999
Q ss_pred EeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEe-eecCCCCeE--EecCCCCCCeEEEEEEEEeCCCCCCC
Q psy7040 334 KDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCA-QTEGDTPKG--KVLDLIEGNQYEFRVLAVNKGGPGEP 410 (716)
Q Consensus 334 ~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~-~~~~~~~~~--~i~~l~~~~~Y~~~v~a~n~~g~~~~ 410 (716)
.....+.+.|+|.+|...+ +.+..|+|+|+..+...|.... ........+ .+.+|.|++.|.|+|+|.+ .|.|.+
T Consensus 396 ~~~s~~sl~LsW~pP~~~~-g~~l~YeV~Yr~~~~~~w~~~~~~~~~~~~~~~v~l~~L~P~T~Y~~rVRA~~-~g~G~W 473 (488)
T 2q7n_A 396 KDINSTVVTFSWYLPGNFT-KINLLCQIEICKANSKKEVRNATIRGAEDSTYHVAVDKLNPYTAYTFRVRCSS-KTFWKW 473 (488)
T ss_dssp EECSTTCEEEEEEEEEECS-SSEEEEEEEEBCTTSCCEEEEEEEECCEEEEEEEEECSCCSSCCBBCCEEEEE-SSCSSC
T ss_pred EecCCCEEEEEEeCCCCCC-CcceEEEEEEEECCCCCceEEEEEecCCCcEEEEEeCCCCCCceEEEEEEEEE-CCCCCC
Confidence 8888999999999976543 4688999999988766664322 222123345 9999999999999999999 888655
Q ss_pred CCCCCce
Q psy7040 411 SDPTAPH 417 (716)
Q Consensus 411 s~~~~~~ 417 (716)
|+.+...
T Consensus 474 S~WS~~v 480 (488)
T 2q7n_A 474 SRWSDEK 480 (488)
T ss_dssp CCCCCCC
T ss_pred CCCcCCE
Confidence 5555433
No 36
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=99.88 E-value=2.7e-21 Score=189.96 Aligned_cols=235 Identities=11% Similarity=0.082 Sum_probs=171.2
Q ss_pred cEEEEeccccCcceEEEEEEEeCCCCceeEEEEEEecCCCCCCCCeEEeEEe-CCeEEEEEECCCCCCCCccceEEEEEE
Q psy7040 185 TKLGVRMAQRADAGFYTVTAENINGKDSVEVEVIVLDKPSPPGGPLKVSNVH-AEGVTLDWKVPDDDGGQPIEKYVVDKM 263 (716)
Q Consensus 185 ~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~~p~~~~~~~~~~-~~~~~l~W~~p~~~~~~~~~~y~v~~~ 263 (716)
..|+|.++...|+|.|+|.+.+..+.....+.|.+..+|.+|.+ +.+.... .++++++|.++.+ ++. ...|.|+++
T Consensus 61 ~~L~i~~~~~~d~g~y~c~~~~~~~~~~~~~~l~v~~~P~~P~~-l~c~~~~~~~~~~~~W~~~~~-~~~-~~~Y~l~~~ 137 (313)
T 2d9q_B 61 SIITLPHLNHTQAFLSCSLNWGNSLQILDQVELRAGYPPAIPHN-LSCLMNLTTSSLICQWEPGPE-THL-PTSFTLKSF 137 (313)
T ss_dssp EEEEESCCCSSEEEEEEEEESSSSEEEEEEEEEEECCCCCCCEE-EEEEEETTTTEEEEEEECCSC-CSS-CCEEEEEEE
T ss_pred EEEEEeccCCCccceEEeeecCCCceeEEEEEEccCCCCCCCcc-ceeeECCCCccEEEEecCCCC-CCC-ceeEEEEEE
Confidence 68999999999999999999765444456678888899999987 7777663 6899999997665 343 457999987
Q ss_pred eCCC------CCeEEccccCcccceEEE--cCCCCCCeEEEEEEEEcCCCCCCCCcccceEEecCCCCCCCCCCCcEEEe
Q psy7040 264 DEAT------GRWTPAGETEGPVTGLEV--EGLIPNHKYKFRVRAVNKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKD 335 (716)
Q Consensus 264 ~~~~------~~~~~~~~~~~~~~~~~i--~~L~p~~~y~~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~ 335 (716)
.... ..|..+... .....+.+ .+|.+++.|.|+|.|.|..|.+.... . .........|.+|.++.+..
T Consensus 138 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~L~~~~~Y~f~V~A~N~~G~~~s~~-~--~~~~~~~~~p~pP~~~~~~~ 213 (313)
T 2d9q_B 138 KSRGNCQTQGDSILDCVPK-DGQSHCSIPRKHLLLYQNMGIWVQAENALGTSMSPQ-L--CLDPMDVVKLEPPMLRTMDP 213 (313)
T ss_dssp ECCTTSCSCCCCEEEECCC-TTCSEEEEEGGGCCSSSCEEEEEEEEETTEEEECCC-E--EECGGGGEECCCCEEEECCC
T ss_pred ecCCCcccCCcccccCCCC-CCCcEEEECccccccceeEEEEEEEECCCCCccCcc-E--EEehhheeccCcCceeEEEE
Confidence 6532 345554432 12344555 56999999999999999999753222 1 11111223578888887765
Q ss_pred e------eCCeEEEEecCCCCCCCccceEEEEEEe-ecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEEeCCCCC
Q psy7040 336 F------DTDFVELAWTPPEQNGGSPIVGYIIEKK-EKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPG 408 (716)
Q Consensus 336 ~------~~~~i~l~W~~p~~~~~~~i~~y~v~~~-~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~ 408 (716)
. ..+++.|+|.+|.. ++..+.+|+|+|+ ..+...|............+.|.+|.+++.|.|+|+|.|..|.|
T Consensus 214 ~~~~~~~~~~~l~l~W~~p~~-~~~~~l~Y~v~y~~~~~~~~w~~~~~~~~~~~~~~l~~L~p~t~Y~~rVra~~~~g~G 292 (313)
T 2d9q_B 214 SPEAAPPQAGCLQLSWEPWQP-GLHINQKCELRHKPQRGEASWALVGPLPLEALQYELCGLLPATAYTLQIRCIRWPLPG 292 (313)
T ss_dssp -------CCSCEEEEEECCGG-GTTSCEEEEEEEEESSSCCCCEEEEEECSCEEEEEECSCCSCCCEEEEEEEEECSSCC
T ss_pred ecccccCCCCeEEEEECCCCC-CCceeEEEEEEEccCCCCCCcEEcccccCcceEEEEeCCCCCCeEEEEEEeeECCCCC
Confidence 5 46889999999764 3434679999999 66667888765445556789999999999999999999999999
Q ss_pred CCCCCCCceEeecCCCCCc
Q psy7040 409 EPSDPTAPHIARAKKVSPY 427 (716)
Q Consensus 409 ~~s~~~~~~~~~~~~~~P~ 427 (716)
.+|+.+......+...+|.
T Consensus 293 ~wS~wS~~~~~~T~~~~P~ 311 (313)
T 2d9q_B 293 HWSDWSPSLELRTTERAAA 311 (313)
T ss_dssp CCCCCCCCEEECCCC----
T ss_pred ccCCCCCccceeCCccCCC
Confidence 8888887777666555553
No 37
>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C*
Probab=99.87 E-value=7.6e-20 Score=179.46 Aligned_cols=282 Identities=14% Similarity=0.111 Sum_probs=184.9
Q ss_pred CCCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCCcEEEecccCCCeEEecCCCCCcEEEEEEEEEe-cC
Q psy7040 55 LDPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETGVWIPVGKTREPEMDVTGLTPGHEYKFRVKALN-KE 133 (716)
Q Consensus 55 ~~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~~-~~ 133 (716)
++||.+|.+......++.|+|++|.......+.+|++.+...... .+ ....+.+.+|.+++.|.|+|+|.. ..
T Consensus 4 ~~pP~nl~~~~~~~~~v~l~W~pP~~~~~~~~~~Y~v~~~~~~~~---~~---~~~~~~~~~~~~~~~y~~~V~a~~~~~ 77 (314)
T 3bpo_C 4 QPPVTNLSVSVENLCTVIWTWNPPEGASSNCSLWYFSHFGDKQDK---KI---APETRRSIEVPLNERICLQVGSQCSTN 77 (314)
T ss_dssp CCCCEEEEEEEETTTEEEEEEECCSSCCCSSCCCEEECCC--CCC---EE---ESSSEEEEECCCSSCEEEEEEECC---
T ss_pred CCCCcceEEEeCCceEEEEEEcCCCCCCCCceEEEEEEecccCce---Ee---ccccEEEEEEcCCCcEEEEEEEEecCC
Confidence 468888999888899999999998765333477899987542111 11 124567788999999999999964 44
Q ss_pred ccCCCccccceEEecCCCCcccccccccceecccCCCCCCceEEEEecCCccEEEEeccccCcceEEEEEEEeCCCCcee
Q psy7040 134 GESEPLETFSSIIARDPYSKYTSVSSLDSHKRSNQPCGSGMVRKVQHLDYNTKLGVRMAQRADAGFYTVTAENINGKDSV 213 (716)
Q Consensus 134 g~~~~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~G~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~ 213 (716)
|.+.++........ .+
T Consensus 78 ~~g~~s~~~~~~~~-~~--------------------------------------------------------------- 93 (314)
T 3bpo_C 78 ESEKPSILVEKCIS-PP--------------------------------------------------------------- 93 (314)
T ss_dssp ------CCEEEEEC-CC---------------------------------------------------------------
T ss_pred CCCCCCcCeeeeee-cC---------------------------------------------------------------
Confidence 44444433221110 00
Q ss_pred EEEEEEecCCCCCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCCCCCeEEcccc--CcccceEEEcCCC--
Q psy7040 214 EVEVIVLDKPSPPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEATGRWTPAGET--EGPVTGLEVEGLI-- 289 (716)
Q Consensus 214 ~~~~~v~~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~--~~~~~~~~i~~L~-- 289 (716)
...+|.+|.+ +.+.......+.++|.++... + ....|.|.+...+...+..|... .+....+.+..+.
T Consensus 94 -----~~~pp~~P~~-l~c~~~~~~~~~c~W~~~~~~-~-~~~~Y~l~y~~~~~~~~~~C~~~~~~~~~~~c~~~~~~~~ 165 (314)
T 3bpo_C 94 -----EGDPESAVTE-LQCIWHNLSYMKCSWLPGRNT-S-PDTNYTLYYWHRSLEKIHQCENIFREGQYFGCSFDLTKVK 165 (314)
T ss_dssp -----CC-CCSSCEE-EEEEEETTTEEEEEEECCC-----CCCCEEEEEEESSCSSCEECCCEEEETTEEEEEEECCC--
T ss_pred -----CCCCCCCCEe-ceEEECCCCeEEEEECCCCCC-C-CCccEEEEEEeCCCCccccCcCeecCCCeEEEEECCCCcc
Confidence 0135667777 788877889999999987654 3 37899999876655566666432 1234667777776
Q ss_pred --CCCeEEEEEEEEcCCCCCCCCcccceEEecCCCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecC
Q psy7040 290 --PNHKYKFRVRAVNKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKY 367 (716)
Q Consensus 290 --p~~~y~~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~ 367 (716)
..+.|.|+|.|.|..|.+..+.. .........|.+|.++.+. ...+.+.|+|.+|...+ ..+..|.|+|+..+
T Consensus 166 ~~~~~~y~~~V~a~n~~G~~~~~~~---~~~~~~~v~P~pP~~l~~~-~~~~~l~lsW~~P~~~~-~~~l~Yev~y~~~~ 240 (314)
T 3bpo_C 166 DSSFEQHSVQIMVKDNAGKIKPSFN---IVPLTSRVKPDPPHIKNLS-FHNDDLYVQWENPQNFI-SRCLFYEVEVNNSQ 240 (314)
T ss_dssp ------CCEEEEEEETTSCSCCEEE---EECSSSSEECCCCEEEEEE-EETTEEEEEEECCTTCC-GGGEEEEEEEEC--
T ss_pred ccceeEEEEEEEEEcCCCceecccE---EEehhheEeeCCCCEEEEE-EcCCcEEEEEeCCCccC-CceEEEEEEEEECC
Confidence 37899999999999887643321 1111223468899999987 78889999999986433 24689999999887
Q ss_pred CCceEEEee------------ecCCCCeEEecCCCCCCeEEEEEEEEeCC----CCCCCCCCCCceEe
Q psy7040 368 SPIWEKCAQ------------TEGDTPKGKVLDLIEGNQYEFRVLAVNKG----GPGEPSDPTAPHIA 419 (716)
Q Consensus 368 ~~~~~~~~~------------~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~----g~~~~s~~~~~~~~ 419 (716)
...|..... .......+.|.+|.+++.|.|+|+|.+.. +.|.+|+.+.....
T Consensus 241 ~~~w~~~~~~~~~c~~~~~~~~~~~~~~~~l~~L~p~t~Y~~qVra~~~~~~~~~~g~WS~WS~~~~~ 308 (314)
T 3bpo_C 241 TETHNVFYVQEAKCENPEFERNVENTSCFMVPGVLPDTLNTVRIRVKTNKLCYEDDKLWSNWSQEMSI 308 (314)
T ss_dssp CCCEEEEEESCCCCCCTTSSCCCSSEEEEEEESCCTTSCEEEEEEEEECTTTSCCCCCCCCCCCCEEE
T ss_pred CCcceEEecccccccccccccccCCceEEEEccCCCCCEEEEEEEeeecccccCCCCeeCCCCCCeEe
Confidence 677764322 12355789999999999999999999863 35556666655443
No 38
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=99.87 E-value=2.7e-20 Score=169.69 Aligned_cols=187 Identities=33% Similarity=0.601 Sum_probs=153.5
Q ss_pred CCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCCcEEEecc-cCCCeEEecCCCCCcEEEEEEEEEecCc
Q psy7040 56 DPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETGVWIPVGK-TREPEMDVTGLTPGHEYKFRVKALNKEG 134 (716)
Q Consensus 56 ~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~-~~~~~~~i~~L~~~~~y~~~v~a~~~~g 134 (716)
.||..|.+...+.+++.|+|++|..+++.++.+|.|+++..+...|..... ...+++.|.+|.+++.|.|+|+|.|..|
T Consensus 7 ~~P~~l~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g 86 (197)
T 3lpw_A 7 GPPQDLKVKEVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVATNCHKTSWKVDQLQEGCSYYFRVLAENEYG 86 (197)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSCCTTSCCCEEEEEEEETTCSSCEEEEEEECSSEEEECCCCTTCEEEEEEEEEETTE
T ss_pred CCCCCcEEEEecCCEEEEEEcCCccCCCCcccEEEEEEEECCCCccEEeecCCCccEEEEcCCCCCCEEEEEEEEEcCcc
Confidence 344557778899999999999997677778999999999888777866543 3458999999999999999999999999
Q ss_pred cCCCccccceEEecCCCCcccccccccceecccCCCCCCceEEEEecCCccEEEEeccccCcceEEEEEEEeCCCCceeE
Q psy7040 135 ESEPLETFSSIIARDPYSKYTSVSSLDSHKRSNQPCGSGMVRKVQHLDYNTKLGVRMAQRADAGFYTVTAENINGKDSVE 214 (716)
Q Consensus 135 ~~~~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~G~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~ 214 (716)
.+.++......+.
T Consensus 87 ~~~~s~~~~~~t~------------------------------------------------------------------- 99 (197)
T 3lpw_A 87 IGLPAETAESVKA------------------------------------------------------------------- 99 (197)
T ss_dssp ECCCEECSSCEES-------------------------------------------------------------------
T ss_pred ccCCCCCccceec-------------------------------------------------------------------
Confidence 8877655443332
Q ss_pred EEEEEecCCCCCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCCCCCeEEccccCcccceEEEcCCCCCCeE
Q psy7040 215 VEVIVLDKPSPPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEATGRWTPAGETEGPVTGLEVEGLIPNHKY 294 (716)
Q Consensus 215 ~~~~v~~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y 294 (716)
..+|.+|.+ +.+.....+++.|+|.+|..+++.++.+|.|++...+...|..... .....+.+.+|.+++.|
T Consensus 100 -----~~~p~~p~~-~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~--~~~~~~~~~~L~p~t~Y 171 (197)
T 3lpw_A 100 -----SERPLPPGK-ITLMDVTRNSVSLSWEKPEHDGGSRILGYIVEMQTKGSDKWATCAT--VKVTEATITGLIQGEEY 171 (197)
T ss_dssp -----CCCCCCCSC-EEEEEECSSCEEEEECCCSCCTTSCCCEEEEEEEETTCSCCEEEEE--ESSSEEEECCCCTTCEE
T ss_pred -----CCCCCCCcc-cEEEeccCCeEEEEecCCCcCCCCcccEEEEEEEeCCCCceEEeec--ccccEEEeCCcCCCCEE
Confidence 135677777 8888888999999999988777668999999999887777776554 35788999999999999
Q ss_pred EEEEEEEcCCCCCCCCcccceEE
Q psy7040 295 KFRVRAVNKQGKSEPLTTTASIE 317 (716)
Q Consensus 295 ~~~v~a~n~~g~~~~~~~~~~~~ 317 (716)
.|+|+|.|..|.+.++..+..++
T Consensus 172 ~~~V~A~n~~G~s~~S~~s~~v~ 194 (197)
T 3lpw_A 172 SFRVSAQNEKGISDPRQLSVPVI 194 (197)
T ss_dssp EEEEEEEETTEECCCEECSSCEE
T ss_pred EEEEEEEeCCccCCCccCcccEe
Confidence 99999999999988877765554
No 39
>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens}
Probab=99.87 E-value=7.5e-21 Score=184.60 Aligned_cols=273 Identities=15% Similarity=0.168 Sum_probs=171.6
Q ss_pred CCCCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCCcEEEec---ccCCCeEEec--CCCCCcEEEEEEE
Q psy7040 54 GLDPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETGVWIPVG---KTREPEMDVT--GLTPGHEYKFRVK 128 (716)
Q Consensus 54 ~~~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~---~~~~~~~~i~--~L~~~~~y~~~v~ 128 (716)
.++||.++++... ...+.|+|++|... ..++. |.|+|+..+...|.... ....+.+.|. +|.++..|.|||+
T Consensus 3 ~l~~P~nv~~~~~-n~~~iL~W~pp~~~-~~~v~-Y~V~y~~~~~~~W~~~~~c~~~~~~~c~lt~~~l~~~~~Y~~rV~ 79 (306)
T 3s98_A 3 PLKSPQKVEVDII-DDNFILRWNRSDES-VGNVT-FSFDYQKTGMDNWIKLSGCQNITSTKCNFSSLKLNVYEEIKLRIR 79 (306)
T ss_dssp -----CCCEEEEE-TTEEEEECC---------CE-EEEEEEESSCSSCEECTTCSSBSSSEEECCC---CTTSCEEEEEE
T ss_pred CCCCCcEeEEEEE-CCeEEEEEcCCCCC-CCCeE-EEEEEEECCCCCcEECCCccCCCCCEEEccccccCCCCcEEEEEE
Confidence 3577888888876 45678999998743 34565 99999988888897642 3334566665 4689999999999
Q ss_pred EEecCccCCCccccceEEecCCCCcccccccccceecccCCCCCCceEEEEecCCccEEEEeccccCcceEEEEEEEeCC
Q psy7040 129 ALNKEGESEPLETFSSIIARDPYSKYTSVSSLDSHKRSNQPCGSGMVRKVQHLDYNTKLGVRMAQRADAGFYTVTAENIN 208 (716)
Q Consensus 129 a~~~~g~~~~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~G~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~ 208 (716)
|.| .|.|.++......+..
T Consensus 80 A~n-~~~S~~s~~~~f~~~~------------------------------------------------------------ 98 (306)
T 3s98_A 80 AEK-ENTSSWYEVDSFTPFR------------------------------------------------------------ 98 (306)
T ss_dssp EEC-SSCEEEEECCCBCHHH------------------------------------------------------------
T ss_pred EEe-CCcCCCEeeeeEechh------------------------------------------------------------
Confidence 999 7766554332211110
Q ss_pred CCceeEEEEEEecCCCCCCCCeEEeEEeCCeEEEEEECCCCCC-----CCccceEEEEEEeCCCCC-eEEccccCcccce
Q psy7040 209 GKDSVEVEVIVLDKPSPPGGPLKVSNVHAEGVTLDWKVPDDDG-----GQPIEKYVVDKMDEATGR-WTPAGETEGPVTG 282 (716)
Q Consensus 209 g~~~~~~~~~v~~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~-----~~~~~~y~v~~~~~~~~~-~~~~~~~~~~~~~ 282 (716)
..++.||. +.+.. ..+++.|+|.+|...+ ...+..|.|.+...+... |... .....
T Consensus 99 -----------~~~~~pP~--v~~~~-~~~si~v~w~P~~~~~~~~~~~g~~l~Y~v~y~~~~~~~~~~~~----~~~~~ 160 (306)
T 3s98_A 99 -----------KAQIGPPE--VHLEA-EDKAIVIHISPGTKDSVMWALDGLSFTYSLVIWKNSSGVEERIE----NIYSR 160 (306)
T ss_dssp -----------HCBCCCCE--EEEEE-CSSCEEEEEECC---CCCC-----CCEEEEEEEETTTCCCEEEE----EECTE
T ss_pred -----------hCccCCCe--EEEEE-cCCEEEEEEECCCCCCcceeccCCcEEEEEEEEECCCCCeEEEe----cccce
Confidence 01344553 56554 3468999999654321 125789999887665443 4421 34588
Q ss_pred EEEcCCCCCCeEEEEEEEEc--CCCCCCCCcccceEEecCCCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEE
Q psy7040 283 LEVEGLIPNHKYKFRVRAVN--KQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYI 360 (716)
Q Consensus 283 ~~i~~L~p~~~y~~~v~a~n--~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~ 360 (716)
+.|.+|.|++.|.|+|+|.+ ..|.|..+......+. ...++.+|.++.+.. .++++.|+|.+|.. + ..|.
T Consensus 161 ~~l~~L~p~t~Y~~~V~A~~~~~~g~g~~S~~~~~~T~--~~~p~~~P~~v~~~~-~~~s~~l~W~~p~~-~----~~~~ 232 (306)
T 3s98_A 161 HKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTT--VENELPPPENIEVSV-QNQNYVLKWDYTYA-N----MTFQ 232 (306)
T ss_dssp EEECSCCTTCEEEEEEEEEEGGGTEECCCCCCEEEECC--SCCSSCCCEEEEEEE-ETTEEEEEEECSSS-S----CEEE
T ss_pred EEEccCCCCCeEEEEEEEEEccCCCCCCCCCcEeeEec--CCCcCCCCceEEEEE-ecCEEEEEeCCCCC-c----EEEE
Confidence 99999999999999999999 5677776666433332 222345788888865 45789999998652 2 2455
Q ss_pred EEEee--------cCCCceEEE-eeecCCCCeEEecC-CCCCCeEEEEEEEEeCCCCCCCCCCCCc
Q psy7040 361 IEKKE--------KYSPIWEKC-AQTEGDTPKGKVLD-LIEGNQYEFRVLAVNKGGPGEPSDPTAP 416 (716)
Q Consensus 361 v~~~~--------~~~~~~~~~-~~~~~~~~~~~i~~-l~~~~~Y~~~v~a~n~~g~~~~s~~~~~ 416 (716)
+.+.. .++..|... .........+.+.+ |.+...|.|||+|.|..|.|.+++...+
T Consensus 233 v~~~~gy~~~~~~~~~~~W~~~~~c~~~~~~~c~~~~~~~~~~~Y~~RV~A~n~~~~s~~s~~~~~ 298 (306)
T 3s98_A 233 VQWLHAFLKRNPGNHLYKWKQIPDCENVKTTQCVFPQNVFQKGIYLLRVQASDGNNTSFWSEEIKF 298 (306)
T ss_dssp EEEEEGGGGSCC----CCCEECGGGTTBSSSEEEEEGGGSCSSEEEEEEEEECSSCBCCCCCCEEE
T ss_pred EEEehhhhhccccccccCceECCCceeCCCccccCchhhcccCCEEEEEEEccCCCcccccccccc
Confidence 55442 235668754 22234667788887 3455699999999999998888875443
No 40
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.87 E-value=1.3e-20 Score=197.59 Aligned_cols=409 Identities=11% Similarity=0.005 Sum_probs=225.3
Q ss_pred eEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeC---CCCCeEEccccCcccceEEEcCCCCCCeEEEEEEEEcCCCC
Q psy7040 230 LKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDE---ATGRWTPAGETEGPVTGLEVEGLIPNHKYKFRVRAVNKQGK 306 (716)
Q Consensus 230 ~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~---~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~ 306 (716)
+.+....+++++|.|... +.+...|.+.+... ...... .......++.|.++...+.+.|+|.|.|..|.
T Consensus 56 ~~~~v~~g~~~~L~c~~~----~~~~~~~~W~~~~~~l~~~~~~~---~~~r~~~SL~I~~v~~~D~G~Y~C~~~n~~~~ 128 (527)
T 3qs9_E 56 AAVEVDVSASITLQVLVD----APGNISCLWVFKHSSLNCQPHFD---LQNRGVVSMVILKMTETQAGEYLLFIQSEATN 128 (527)
T ss_dssp CEEEECSSCCEEEEEECS----CCSSCEEEEEETTEEECCCCBC--------CEEEEEESSCCSSSCSEEEEEEEC--CE
T ss_pred eeEEEeccccEEEEEEEe----cCCceeEEEEecCCccCcccccC---CCcceEEEEEECcCChhhCeeEEEEEEecccc
Confidence 355666789999999962 33445565544211 001111 11122356999999999999999999997664
Q ss_pred CCCCcccceEEecC-CCCCCC--------CCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeee
Q psy7040 307 SEPLTTTASIEAKN-PFNQPG--------KPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQT 377 (716)
Q Consensus 307 ~~~~~~~~~~~~~~-~~~~p~--------~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~ 377 (716)
... ...+.+.. ....+. ....+.+...+.....+.|... +..+..+. . .
T Consensus 129 ~~~---~~~v~v~~~~~~~~~~p~~~~~~~~~~L~C~a~G~P~P~i~W~~~----~~~~~~~~----~-----------~ 186 (527)
T 3qs9_E 129 YTI---LFTVSIRNTLLYTLRRPYFRKMENQDALVCISESVPEPIVEWVLC----DSQGESCK----E-----------E 186 (527)
T ss_dssp EEE---EEEEEEC-----CEEEEEEEECSSSSCEEEEEEESSCCEEEEEEC-----------------------------
T ss_pred EEE---EEEEEECCceeeccCCCcEEecCCceEEEEEEceecCCeEEEEEC----CCCCcccc----c-----------c
Confidence 311 10111110 000000 0112333333334444555431 11111110 0 0
Q ss_pred cCCCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEe-ccCCC
Q psy7040 378 EGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVI-GEPIP 456 (716)
Q Consensus 378 ~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~-~~p~~ 456 (716)
...........+.+.+...|+|.|.|..|..... ..... ...+|.+ .+....+..|+.+.|.|.+. +.|.+
T Consensus 187 ~~~~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~~~--~~~l~---V~~~p~~---~p~~~~v~~G~~v~L~C~~~~g~p~p 258 (527)
T 3qs9_E 187 SPAVVKKEEKVLHELFGTDIRCCARNELGRECTR--LFTID---LNQTPQT---TLPQLFLKVGEPLWIRCKAVHVNHGF 258 (527)
T ss_dssp ---CEEECCSEECCCCSSCEEEEEECSSCEEEEE--CEEEE---SSSCCCC---SCCEEEECTTSCEEEEEEEEESSSCC
T ss_pred CCcEEEEeeeeccccCCEEEEEEEEeCCCcccce--EEEEE---EeccCcc---CCCceEEeCCCeEEEEEEEccCCCCe
Confidence 0000011112233556678999999998864321 01111 1123332 23467899999999999996 99999
Q ss_pred eEEEEeCCeEeccCCcEEEEe--C----CCeEEEEECCCCCCCceeEEEEEEcCCCceeeEEEEEEE-EEEEEEeCC---
Q psy7040 457 TKEWLCNDITIISKDRFKIVN--D----DKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVL-GCSLKWNPP--- 526 (716)
Q Consensus 457 ~~~W~~~~~~~~~~~~~~~~~--~----~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v~-~v~l~W~~p--- 526 (716)
.+.|++++..+.....+.... . .....|.|.++...|.|.|+|.|.|. ...++.+.+. ...+...+.
T Consensus 259 ~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~---~~~~~~L~V~~~p~i~~~~~~~~ 335 (527)
T 3qs9_E 259 GLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTIVEKGFINATNSSED 335 (527)
T ss_dssp CEEEECSSSCCCGGGEEEEEEEETTTEEEEEEEEEESSCCGGGCEEEEEEETTE---EEEEEEEEEC--CEEECCCSCCE
T ss_pred EEEEEECCEECCCCceeeeeeeccCcceeeEEEEEEccCCcccCeEEEEEEEeC---CCceEEEEEEccCccccccCccc
Confidence 999999998775543332211 1 12346999999999999999999998 4555555554 111222111
Q ss_pred --CCCCCCceeeEEEEEEecCCCceeeeEEEccceeeeecc-ccceeEEEEcCCCCCCeEEEEEEEEcCCCCCccceeee
Q psy7040 527 --EDDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDN-VDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVV 603 (716)
Q Consensus 527 --~~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~-~~~~~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~~~~ 603 (716)
...+......|.+...+. |.+.|++.+........ ......+.|.++...+.+.|+|.|.|..|....+..+.
T Consensus 336 ~~v~~G~~v~L~C~~~g~P~----p~i~W~k~g~~l~~~~~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L~ 411 (527)
T 3qs9_E 336 YEIDQYEEFCFSVRFKAYPQ----IRCTWTFSRKSFPCEQKGLDNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLN 411 (527)
T ss_dssp ECCCTTCCCCEEEEEEEESC----CEEEEEETTEEEECBCCBCSSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC
T ss_pred EEEcCCCeEEEEEEEEecCC----CEEEEEECCEECcCCcccccCCcEEEEecCCcccCEEEEEEEEeCCCcEEEEEEEE
Confidence 122233344555555444 44999998876543221 12346788999999999999999999999777666666
Q ss_pred ccCCCCCCccceeeccceeEEEEEEeeEEEEeeeeccCcee----eEEEEeCCeEeeec-----------------ccce
Q psy7040 604 VTDKPSAPEGPIQWLLTLTDVTWEISNYLQELHSSLMPISL----ESQYLMNDKRVTID-----------------NVDY 662 (716)
Q Consensus 604 v~~~p~~~~~~~~~~~~~v~l~w~i~~y~v~~~~~~~~~~~----~~~W~~~~~~~~~~-----------------~~~~ 662 (716)
|..+|. +..... .. .+.|.+.| .+.|++++...... ....
T Consensus 412 V~~~P~----i~~~~~-~~--------------~l~C~a~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (527)
T 3qs9_E 412 IRRKPQ----VLAEAS-AS--------------QASCFSDGYPLPSWTWKKCSDKSPNCTEEITEGVWNRKANRKVFGQW 472 (527)
T ss_dssp --CCCE----EEECCC-CE-----------------EEEECSSCCEEEEECCC-----CCCCCCCCEEEC---------C
T ss_pred EecCCe----EEEeCC-CC--------------EEEEEEEEEcCCeEEEEECCCCcCCCccccccccceeccccccCCce
Confidence 777664 221111 11 26777777 89999875433110 0011
Q ss_pred eeEEEEccCCCCCcEEEEEEEEcCCCCceeeEEEEEecC
Q psy7040 663 FTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTDK 701 (716)
Q Consensus 663 ~~~~~i~~l~~~~~y~y~~~a~n~~G~~~~s~~l~v~~~ 701 (716)
.....|.-...+|.|.|+|.|.|..|....++.|.|..+
T Consensus 473 ~~~s~L~i~~~~d~G~Y~C~A~N~~G~~~~~~~L~V~~p 511 (527)
T 3qs9_E 473 VSSSTLNMSEAIKGFLVKCCAYNSLGTSCETILLNSPGP 511 (527)
T ss_dssp EEEEECCCCCSSCSCEEEEEEECSSCEEEEEEEC-----
T ss_pred EEEEEEEEEEcCCCEEEEEEEEeCCCCceeEEEEecCCC
Confidence 122333333356999999999999999999998876553
No 41
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Probab=99.87 E-value=1.4e-20 Score=172.40 Aligned_cols=187 Identities=22% Similarity=0.356 Sum_probs=145.9
Q ss_pred EecCCCCCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCC-CCCeEEcc-ccCcccceEEEcCCCCCCeEEE
Q psy7040 219 VLDKPSPPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEA-TGRWTPAG-ETEGPVTGLEVEGLIPNHKYKF 296 (716)
Q Consensus 219 v~~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~-~~~~~~~~-~~~~~~~~~~i~~L~p~~~y~~ 296 (716)
|.++|.+|.+ +.+.. ..+++.|+|++|. +++.++.+|.|+++... ...|.... ........+.+ +|.|++.|.|
T Consensus 2 v~~~P~~P~~-~~~~~-~~~sv~l~W~~p~-~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~~-~L~p~t~Y~~ 77 (205)
T 1cfb_A 2 VQDVPNAPKL-TGITC-QADKAEIHWEQQG-DNRSPILHYTIQFNTSFTPASWDAAYEKVPNTDSSFVV-QMSPWANYTF 77 (205)
T ss_dssp CCCCCCCCEE-EEEEE-CSSEEEEEEECCC-CTTSCCCEEEEEEEESSSTTCCEEEEEEEETTCSEEEE-ECCSSEEEEE
T ss_pred cccCCCCCCC-cEEEe-cCCEEEEEEECcc-cCCCceEEEEEEEecCCCCCCceeeeeccCCCceEEEE-eCCCCCEEEE
Confidence 4578999988 78888 9999999999875 45568999999998654 35675432 22244567777 9999999999
Q ss_pred EEEEEcCCCCCCCCcccceEEecCCCCCC-CCCCCcEEEeeeCCeEEEEecCCCC-CCCccceEEEEEEeecCCCc-eEE
Q psy7040 297 RVRAVNKQGKSEPLTTTASIEAKNPFNQP-GKPGTPEIKDFDTDFVELAWTPPEQ-NGGSPIVGYIIEKKEKYSPI-WEK 373 (716)
Q Consensus 297 ~v~a~n~~g~~~~~~~~~~~~~~~~~~~p-~~p~~~~~~~~~~~~i~l~W~~p~~-~~~~~i~~y~v~~~~~~~~~-~~~ 373 (716)
+|.|.|..|.+.++.....+. +....| .+|.++.+.....+++.|+|.+|.. +.++.+.+|.|+|+..+... |..
T Consensus 78 ~V~A~n~~G~~~~s~~~~~~~--T~~~~P~~~P~~~~~~~~~~~sv~l~W~~p~~~~~ng~i~~Y~v~~~~~~~~~~~~~ 155 (205)
T 1cfb_A 78 RVIAFNKIGASPPSAHSDSCT--TQPDVPFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWEN 155 (205)
T ss_dssp EEEEEETTEECCCCCCCCCEE--ECCCCCSCCCSCCEEECSSTTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCCEE
T ss_pred EEEEEECCccCCCCCCceeEE--cCCcCCCCCCeeeEeecCCCCeEEEEEECCCccccCCCceEEEEEEEECCCCCCcEE
Confidence 999999999888774322222 222344 5788999999999999999999762 33457999999999876544 766
Q ss_pred EeeecCCCCeEEecCCCCCCeEEEEEEEEeCCCCCCCC
Q psy7040 374 CAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPS 411 (716)
Q Consensus 374 ~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s 411 (716)
.........++.|.+|.+++.|.|+|+|.|..|.|..+
T Consensus 156 ~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s 193 (205)
T 1cfb_A 156 NNIFDWRQNNIVIADQPTFVKYLIKVVAINDRGESNVA 193 (205)
T ss_dssp EEECCTTCCEEEECSCCSSCEEEEEEEEEETTEECSSC
T ss_pred EEecCCCccEEEEcCCCCCcEEEEEEEEEcCCCcCCCC
Confidence 66555567899999999999999999999999999853
No 42
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=99.86 E-value=2.4e-20 Score=172.33 Aligned_cols=193 Identities=23% Similarity=0.352 Sum_probs=152.9
Q ss_pred CCCCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCCC-CCeEEcccc-----------CcccceEEEcCCCC
Q psy7040 223 PSPPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEAT-GRWTPAGET-----------EGPVTGLEVEGLIP 290 (716)
Q Consensus 223 p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~-~~~~~~~~~-----------~~~~~~~~i~~L~p 290 (716)
+.+|.+ +.+.....+++.|+|++|...++ ++.+|.|+++..+. ..|..+... ......+.+.+|.|
T Consensus 2 ~~pP~~-~~~~~~~~~sv~l~W~~p~~~~~-~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p 79 (214)
T 2ibg_A 2 TYPPTP-PNVTRLSDESVMLRWMVPRNDGL-PIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKP 79 (214)
T ss_dssp CCCCCC-CEEEEEETTEEEEEEEEECCSSC-CEEEEEEEEEESSSSCCCEECSCCEECCSSSCSSSSEEEEEEEECSCCT
T ss_pred CCCCCC-CEeeEecCCEEEEEEECCCCCCC-CceEEEEEEEECCCCCcCcccccccCccccccccccCcceeEEecCCcC
Confidence 456666 57788899999999998876554 79999999988644 678766531 13567899999999
Q ss_pred CCeEEEEEEEEcCCCCCCCCcccceEEecC--CCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCC
Q psy7040 291 NHKYKFRVRAVNKQGKSEPLTTTASIEAKN--PFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYS 368 (716)
Q Consensus 291 ~~~y~~~v~a~n~~g~~~~~~~~~~~~~~~--~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~ 368 (716)
++.|.|+|.|.|..|.+..+..+..+.... +..+|.+|.++.+...+.+++.|+|.+|..+.++.+.+|.|+++..+.
T Consensus 80 ~t~Y~~~V~A~n~~g~~~~s~~s~~~~~~~~~~~~~~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~ 159 (214)
T 2ibg_A 80 QHTYRFRILAVYSNNDNKESNTSAKFYLQPGAALDPMPVPELLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSS 159 (214)
T ss_dssp TCEEEEEEEEEETTSCEEECCCCCCEECCCSTTSCCCCCCEECCCBCCSSSCEEEEEECCTTCCGGGCCEEEEEEEETTC
T ss_pred CCEEEEEEEEEecCCCCCCCCCcccEEeccCcCCCCCCCCcccEEEEccCCeEEEEEeCCCccCCCCcceEEEEEEECCC
Confidence 999999999999999877766444333322 333556788888888899999999999864456689999999998775
Q ss_pred -CceEEEeeecCCCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCce
Q psy7040 369 -PIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPH 417 (716)
Q Consensus 369 -~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~ 417 (716)
..|...........++.|.+|.+++.|.|+|+|.|..|.|.+|......
T Consensus 160 ~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~ 209 (214)
T 2ibg_A 160 AGEYFKATIEGAHARSFKIAPLETATMYEFKLQSFSAASASEFSALKQGR 209 (214)
T ss_dssp CSCCEEEEEECTTCCEEEECSCCTTCEEEEEEEEECSSCBCCCCCCEEEE
T ss_pred CcceEEeeccCCcceEEEeCCCCCCCEEEEEEEEEcCCccCCCcceEeeE
Confidence 6787766655567899999999999999999999999999888765433
No 43
>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus}
Probab=99.86 E-value=1.3e-18 Score=177.15 Aligned_cols=430 Identities=12% Similarity=0.026 Sum_probs=262.0
Q ss_pred CCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCCCCCeEEccccCcccceEEEcCCCCCCeEEEEEEEEcCCC
Q psy7040 226 PGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEATGRWTPAGETEGPVTGLEVEGLIPNHKYKFRVRAVNKQG 305 (716)
Q Consensus 226 p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g 305 (716)
|.+ ++.....-.....+|++|...+ .-..|.+...... ..+.. ...+.+.|..|.+++ +.+.+......
T Consensus 7 ~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~----~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~- 75 (488)
T 2q7n_A 7 DKD-LKCTTNNMRVWDCTWPAPLGVS--PGTVKDICIKDRF----HSCHP--LETTNVKIPALSPGD-HEVTINYLNGF- 75 (488)
T ss_dssp --C-CCCEESSSSEEEEECCCCSSSC--CSCEEEEEEESSS----EEEEE--CSSSEEEEECCCSSC-EEEEEEESSSC-
T ss_pred Ccc-ceeEecCceEEEEeeeCcCccC--CCceEEEEEecCC----ceeEE--eccceeEcccCCCCc-ceEEEeeccCc-
Confidence 444 4555555667889999876533 3456777654322 22332 236799999999999 47777633321
Q ss_pred CCCCCcccceEEe-cCCCCCCCCCCCcEEEee-eCCeEEEEecCCCCC-CCccceEEEEEEeecCC--CceEEEeeecC-
Q psy7040 306 KSEPLTTTASIEA-KNPFNQPGKPGTPEIKDF-DTDFVELAWTPPEQN-GGSPIVGYIIEKKEKYS--PIWEKCAQTEG- 379 (716)
Q Consensus 306 ~~~~~~~~~~~~~-~~~~~~p~~p~~~~~~~~-~~~~i~l~W~~p~~~-~~~~i~~y~v~~~~~~~--~~~~~~~~~~~- 379 (716)
....+.- +.-...|.+|.++.+... ....+.|+|..+... ....-..|.|++..... ..|........
T Consensus 76 ------~~~~~~~~~~~~~~p~~p~~l~~~~~~~~~~l~~~W~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~ 149 (488)
T 2q7n_A 76 ------QSKFTLNEKDVSLIPETPEILDLSADFFTSSLLLKWNDRGSALPHPSNATWEIKVLQNPRTEPVALVLLNTMLS 149 (488)
T ss_dssp ------EEEEEECSTTCEECCCCCCEEECCEETTTTEEEEEECBCGGGSCSSEEEEEEEECCCSSSSCSCCCEECCEECS
T ss_pred ------eeEEEEecCccccCCCCCeeEEEEEecCCCeEEEEEeCCCccccccCCeEEEEEEEEeccceEEEEEEEEEEec
Confidence 1111111 122234888998877765 468899999875432 11112468877644321 22333221111
Q ss_pred ---CCCeEEecCC--CCCCeEEEEEEEEe----CCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEE
Q psy7040 380 ---DTPKGKVLDL--IEGNQYEFRVLAVN----KGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINV 450 (716)
Q Consensus 380 ---~~~~~~i~~l--~~~~~Y~~~v~a~n----~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v 450 (716)
......-..+ ..+..|.++||+.. ..|.+.+|+.+........ .|......+.+..+..|+.+.|.|.+
T Consensus 150 ~~~~~~~w~w~s~~pl~c~~~~v~iR~~~~~~~~~~~~~ws~Ws~~~~~~~~--~~t~i~v~P~~~~v~~Gs~vtl~C~a 227 (488)
T 2q7n_A 150 GKDTVQHWNWTSDLPLQCATHSVSIRWHIDSPHFSGYKEWSDWSPLKNISWI--RNTETNVFPQDKVVLAGSNMTICCMS 227 (488)
T ss_dssp SSCBCCEEEEECSSCCSSSCCEEEEEEEECCTTCCSCBCCCCCCCCEECCCC--CCSSCCEECTTCEEESSCCCEEEECC
T ss_pred CCCceeEeeccCCCcccccceEEEEEEEeccccccCCCCCcCCCChhhcCCc--CCCceEECCCCCEEcCCCCEEEEEEC
Confidence 1122222222 23779999999997 4566677777766655322 11111123445668999999999988
Q ss_pred eccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEEEEEEE-------------
Q psy7040 451 IGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVL------------- 517 (716)
Q Consensus 451 ~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v~------------- 517 (716)
. .+.+.|++++..+... ...+....|.|.++...+.|.|.|.+.+ .+. ...+.+.+.
T Consensus 228 ~---~~~I~W~~ng~~i~~~-----ri~~~~~~L~I~nl~~sd~g~y~~~C~~-~~~-i~~~~l~v~~pP~~P~nl~C~~ 297 (488)
T 2q7n_A 228 P---TKVLSGQIGNTLRPLI-----HLYGQTVAIHILNIPVSENSGTNIIFIT-DDD-VYGTVVFAGYPPDVPQKLSCET 297 (488)
T ss_dssp S---SCEEEEEETTEECCCE-----ECSSSCEEEECCSCCCCCSSCEEEEEEE-SSC-EEEEEEEEECCCCCCCSCEEEB
T ss_pred C---CCEEEEEECCEECchh-----hccceEEEEEEeCCCcccCCcEEEEEEc-CCe-EEEEEEEeeCCCCCCcccEEEE
Confidence 7 4689999999876432 2345567899999999888888887763 222 224444433
Q ss_pred ----EEEEEEeCCCCC--CCCceeeEEEEEEecCCCceeeeEEEccceeeeeccccceeEEEEcCCCCCCeEEEEEEEEc
Q psy7040 518 ----GCSLKWNPPEDD--GGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDNVDYFTKITIRPLQRSDTAQYTVTATN 591 (716)
Q Consensus 518 ----~v~l~W~~p~~~--~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n 591 (716)
.+.++|.++.+. +|..+..|.|++...+. ...|...... ......+.+..+...+.|.|+|.|.|
T Consensus 298 ~~~~svtcsW~pg~~~~l~G~~~t~Y~L~y~~~g~---~~~c~~~~~~------~~~~~~ct~~l~~~~t~Y~f~V~A~N 368 (488)
T 2q7n_A 298 HDLKEIICSWNPGRITGLVGPRNTEYTLFESISGK---SAVFHRIEGL------TNETYRLGVQMHPGQEIHNFTLTGRN 368 (488)
T ss_dssp SSSSEEEEEECCCSCCCCCTTSSCEEEEEETTTCC---EEEEECSSCC------CSSCEEEEEECCSSCCCCEEEEEEEE
T ss_pred cCCCEEEEEEeCCCcCCCCCCCceeEEEEEEECCC---CCCCcccccc------CCceEEEEEcCCCCccEEEEEEEEEe
Confidence 899999998765 34567899999875432 0234322210 01125666654444699999999999
Q ss_pred CCCCCccceeeec----cCCCCCCcc--ceeeccceeEEEEE--------EeeEEEEeeeeccCceeeEEEEeCCeEeee
Q psy7040 592 SQGKDQVFIEVVV----TDKPSAPEG--PIQWLLTLTDVTWE--------ISNYLQELHSSLMPISLESQYLMNDKRVTI 657 (716)
Q Consensus 592 ~~G~~~~s~~~~v----~~~p~~~~~--~~~~~~~~v~l~w~--------i~~y~v~~~~~~~~~~~~~~W~~~~~~~~~ 657 (716)
..|.+.. .+.+ ..+|.+|.. +..+..+++.|+|. +.+|.|+|+... ...|..+-. +..
T Consensus 369 ~~G~~~S--~~~~~~~~~v~P~PP~nl~v~~~s~~sl~LsW~pP~~~~g~~l~YeV~Yr~~~-----~~~w~~~~~-~~~ 440 (488)
T 2q7n_A 369 PLGQAQS--AVVINVTERVAPHDPTSLKVKDINSTVVTFSWYLPGNFTKINLLCQIEICKAN-----SKKEVRNAT-IRG 440 (488)
T ss_dssp TTEEEEE--EEECCGGGTBCCCCCEEEEEEECSTTCEEEEEEEEEECSSSEEEEEEEEBCTT-----SCCEEEEEE-EEC
T ss_pred CCCCccc--eEEEEecCCCCCCCCeEEEEEecCCCEEEEEEeCCCCCCCcceEEEEEEEECC-----CCCceEEEE-Eec
Confidence 9998543 2332 234444442 44456789999999 677888877632 223422111 100
Q ss_pred cccceeeEEEEccCCCCCcEEEEEEEEcCCCC---ceeeEEEEEecCCC
Q psy7040 658 DNVDYFTKITIRPLQRSDTAQYTVTATNSQGK---DQVFIEVVVTDKPS 703 (716)
Q Consensus 658 ~~~~~~~~~~i~~l~~~~~y~y~~~a~n~~G~---~~~s~~l~v~~~p~ 703 (716)
.......+.|.+|.+++.|.++|+|.| .|. +.+|..+.+.+++.
T Consensus 441 -~~~~~~~v~l~~L~P~T~Y~~rVRA~~-~g~G~WS~WS~~v~~~T~e~ 487 (488)
T 2q7n_A 441 -AEDSTYHVAVDKLNPYTAYTFRVRCSS-KTFWKWSRWSDEKRHLTTEA 487 (488)
T ss_dssp -CEEEEEEEEECSCCSSCCBBCCEEEEE-SSCSSCCCCCCCCCBCCCCC
T ss_pred -CCCcEEEEEeCCCCCCceEEEEEEEEE-CCCCCCCCCcCCEeEECCCC
Confidence 001123349999999999999999999 888 47777777777654
No 44
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.86 E-value=1.1e-17 Score=180.66 Aligned_cols=386 Identities=10% Similarity=0.050 Sum_probs=227.5
Q ss_pred CeEEecCCCCCcEEEEEEEEEecCccCCCccccceEEecCCCCc--------ccccccccceecccCCC---------CC
Q psy7040 110 PEMDVTGLTPGHEYKFRVKALNKEGESEPLETFSSIIARDPYSK--------YTSVSSLDSHKRSNQPC---------GS 172 (716)
Q Consensus 110 ~~~~i~~L~~~~~y~~~v~a~~~~g~~~~s~~~~~~~~~~p~~~--------~~~~~~~~~~~~~~~p~---------G~ 172 (716)
..|.|.+++..+.+.|+|+|.|..|... ......+. .+|... .......+.|.+...++ |.
T Consensus 75 ~~L~I~~v~~~D~G~Y~C~~~n~~~~~~-~~~~l~V~-~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~ 152 (585)
T 2ocw_A 75 FVVNIAQLSQDDSGRYKCGLGINSRGLS-FDVSLEVS-QGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIG 152 (585)
T ss_pred EEEEECCCCcccCEEEEEEcccCCCCce-EEEEEEEe-cCccccCCCccEEEEcCCCEEEEEEecCCCCCccEEEEECCC
Confidence 4689999999999999999998876432 11222222 122111 11222345688875543 21
Q ss_pred -----------------CceEEEEecCC---ccEEEEeccccCcceEEEEEEEeCCCCceeEEEEEEecCCCCCCCCeEE
Q psy7040 173 -----------------GMVRKVQHLDY---NTKLGVRMAQRADAGFYTVTAENINGKDSVEVEVIVLDKPSPPGGPLKV 232 (716)
Q Consensus 173 -----------------~~~~~~~~~~~---~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~~p~~~~~~ 232 (716)
.+++.+...+. ...|.|.+++..|+|.|+|.|.|..|..+..+.|.|..+| |. .+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~--p~---~~ 227 (585)
T 2ocw_A 153 LYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPE--PE---LV 227 (585)
T ss_pred CCceEEecCCcccCccccCcEEEEeccCCCcEEEEEEccCChhHCeEEEEEeccCCccccceEEEEEccCC--Cc---ee
Confidence 23444444333 2389999999999999999999999998888999887643 22 23
Q ss_pred eEEeCCeEEEEEECCCCCCCCccceEEEEEEeCC----------------CCCeEEccccCcccceEEEcCCCCCCeEEE
Q psy7040 233 SNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEA----------------TGRWTPAGETEGPVTGLEVEGLIPNHKYKF 296 (716)
Q Consensus 233 ~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~----------------~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~ 296 (716)
....+..+.|.|.. ..... +...|.+...... ..+.............+.|.++...+.+.|
T Consensus 228 ~~~~G~~v~l~C~~-~~~~~-~~~~~~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~i~~v~~~d~G~Y 305 (585)
T 2ocw_A 228 YEDLRGSVTFHCAL-GPEVA-NVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRY 305 (585)
T ss_pred EEcCCCcEEEEEEc-CCCCC-CceEEEEEeCCCCCcceEEeCCCcCCcccCCceEeeccCCCcEEEEEEccCChhhCEEE
Confidence 34467889999995 21111 1123332211110 111111111011223799999999999999
Q ss_pred EEEEEcCCCCCCCCc--ccceEEecCCCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEee--cCCC-ce
Q psy7040 297 RVRAVNKQGKSEPLT--TTASIEAKNPFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKE--KYSP-IW 371 (716)
Q Consensus 297 ~v~a~n~~g~~~~~~--~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~--~~~~-~~ 371 (716)
+|.|.|. |....+. ....+.+..+...+..|..+.+ ..+..+.|.|.....+. +...|.+.|.. .+.. ..
T Consensus 306 ~C~a~n~-g~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~--~~G~~v~l~C~~~~~p~--p~i~~w~~W~~~~~g~~~~l 380 (585)
T 2ocw_A 306 LCGAHSD-GQLQEGSPIQAWQLFVNEESTIPRSPTVVKG--VAGSSVAVLCPYNRKES--KSIKYWCLWEGAQNGRCPLL 380 (585)
T ss_pred EEEEEcC-CCccccCceeeEEEEEecccccccCCcceEE--EeCCcEEEEEecCCCCC--ccEEEEEEEEccCCCCCcee
Confidence 9999995 3322111 1112333322233334444433 35667888887632211 22234334433 2210 00
Q ss_pred E------------EEeee---cCCCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccE
Q psy7040 372 E------------KCAQT---EGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDI 436 (716)
Q Consensus 372 ~------------~~~~~---~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~ 436 (716)
. ..... ......+.|.++...+.+.|+|.| |..|....+ . ...+.. .+|.+.. +...
T Consensus 381 ~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a-n~~g~~~~~--~-~l~V~~--~~p~~~~--~~~~ 452 (585)
T 2ocw_A 381 VDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLT-NGDTLWRTT--V-EIKIIE--GEPNLKV--PGNV 452 (585)
T ss_pred eeecceeecccCCCEEEeccCCCcEEEEEECCCChhhCEEEEEcc-cCCCcccee--E-EEEEec--Ccccccc--CCce
Confidence 0 00000 112234888999999999999999 876643211 1 112211 1333322 4567
Q ss_pred EEecCCeEEEEEEEe----ccCCCeEEEEeCCeEeccCCc-------EEEEeCCCeEEEEECCCCCCCceeEEEEEEcCC
Q psy7040 437 KVRAGSNFEFDINVI----GEPIPTKEWLCNDITIISKDR-------FKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSW 505 (716)
Q Consensus 437 ~~~~g~~~~~~~~v~----~~p~~~~~W~~~~~~~~~~~~-------~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~ 505 (716)
.+..|+.+.|.|.+. +.|.+.+.|++++..+..... ..+...+....|.|.++...|.|.|+|.|.|..
T Consensus 453 ~v~~G~~v~L~C~~~~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~ 532 (585)
T 2ocw_A 453 TAVLGETLKVPCHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWCGVKQGH 532 (585)
T ss_pred eEecCCcEEEEEEecCCCCCCccEEEEEeecCceeeeccCCCCCcceEEecCcccEEEEEECCCCcccCeEEEEEeEeCC
Confidence 899999999999997 678889999999987643221 111123345799999999999999999999999
Q ss_pred CceeeE-EEEEEE
Q psy7040 506 GTDKGT-AKVTVL 517 (716)
Q Consensus 506 g~~~~s-~~~~v~ 517 (716)
|..... +.+.|.
T Consensus 533 G~~~~~~~~l~V~ 545 (585)
T 2ocw_A 533 FYGETAAVYVAVE 545 (585)
T ss_pred CccEEEEEEEEEE
Confidence 866543 555554
No 45
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.86 E-value=7.8e-20 Score=177.52 Aligned_cols=257 Identities=15% Similarity=0.223 Sum_probs=185.7
Q ss_pred CCcccccccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcC
Q psy7040 425 SPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNS 504 (716)
Q Consensus 425 ~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~ 504 (716)
||.+. ..+..+.+..|+.+.|.|.+.+.|.+.+.|++++..+....++.+........|.|.++...|.|.|+|.|.|.
T Consensus 5 pP~~~-~~p~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~ 83 (284)
T 2rik_A 5 PPFFD-LKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNV 83 (284)
T ss_dssp CCEEE-ECCCCEEEETTCCEEEEEEEESSSCCEEEEEETTEECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCEEE-ccccceEecCCCcEEEEEEEEcCCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEEEEEC
Confidence 44443 23456789999999999999999999999999999998888888877777889999999999999999999999
Q ss_pred CCceeeEEEEEEEEE-EEEEeCCC----CCCCCceeeEEEEEEecCCCceeeeEEEccceeeeec-----cccceeEEEE
Q psy7040 505 WGTDKGTAKVTVLGC-SLKWNPPE----DDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTID-----NVDYFTKITI 574 (716)
Q Consensus 505 ~g~~~~s~~~~v~~v-~l~W~~p~----~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~-----~~~~~~~~~i 574 (716)
.|..+.+..+.+... .+.-..+. ..+......|.+ .+.+.+.+.|++.+....... .......+.|
T Consensus 84 ~g~~~~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~----~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i 159 (284)
T 2rik_A 84 AGKDSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKI----GGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEM 159 (284)
T ss_dssp TEEEEEEEEEEEECCCEEEECCCSEEEEETTCCEEEEEEE----ESSSCCEEEEEETTEECCCSSSEEEEEETTEEEEEE
T ss_pred CceEEEEEEEEccCCCcccccCCCceEecCCceEEEEEEE----eeeCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEE
Confidence 998877777777611 10000110 112222233333 233455699999876543221 1123467999
Q ss_pred cCCCCCCeEEEEEEEEcCCCCCccceeeeccCCCCCC---ccceeeccceeEEEEEEeeEEEEeeeeccCcee----eEE
Q psy7040 575 RPLQRSDTAQYTVTATNSQGKDQVFIEVVVTDKPSAP---EGPIQWLLTLTDVTWEISNYLQELHSSLMPISL----ESQ 647 (716)
Q Consensus 575 ~~L~~~~~y~~~v~a~n~~G~~~~s~~~~v~~~p~~~---~~~~~~~~~~v~l~w~i~~y~v~~~~~~~~~~~----~~~ 647 (716)
.++...+.+.|+|.|.|..|....+..+.|..+|... .......+..+. |.|.+.| .+.
T Consensus 160 ~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~--------------l~C~~~g~p~~~v~ 225 (284)
T 2rik_A 160 YNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPHPVETLKGADVH--------------LECELQGTPPFQVS 225 (284)
T ss_dssp CSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCBCCSCCCCEEECTTCCEE--------------EEEECBSSSCCEEE
T ss_pred CCCCcccCEEEEEEEEcCCCceeEEEEEEEecCCcceeCCCcceecCCCeEE--------------EEEEEEecCCCEEE
Confidence 9999999999999999999876666666666655422 111122233444 5566555 899
Q ss_pred EEeCCeEeeecc------cceeeEEEEccCCCCCcEEEEEEEEcCCCCceeeEEEEEec
Q psy7040 648 YLMNDKRVTIDN------VDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTD 700 (716)
Q Consensus 648 W~~~~~~~~~~~------~~~~~~~~i~~l~~~~~y~y~~~a~n~~G~~~~s~~l~v~~ 700 (716)
|+++|..+.... ......|.|.++...|.|.|+|.|.|..|....+..|.|.+
T Consensus 226 W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 284 (284)
T 2rik_A 226 WHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSYTCVGSITLKA 284 (284)
T ss_dssp EEETTEEECBTTTEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEECC
T ss_pred EEECCEECcCCCCEEEEEcCCEEEEEEcCCCcccCEEEEEEEEeCCCceeEEEEEEEcC
Confidence 999999887651 12236899999999999999999999999999999888863
No 46
>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D*
Probab=99.85 E-value=1.5e-20 Score=188.04 Aligned_cols=284 Identities=13% Similarity=0.067 Sum_probs=165.5
Q ss_pred CCCCCCCceEEEEe-CCeEEEEecCCCC-C-CCCccceEEEEEEcCCCCcEEEecccCCCeEEecCCCCCcEEEEEEEEE
Q psy7040 54 GLDPEGPLEVSNIH-KDGCTLKWNKPKD-D-GGEPLEGYLVEKYDPETGVWIPVGKTREPEMDVTGLTPGHEYKFRVKAL 130 (716)
Q Consensus 54 ~~~p~~~l~~~~~~-~~s~~l~W~~p~~-~-~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~ 130 (716)
.+.||.+|.+.+.. .+++.|+|++|.. + .+..+..|+|+|+..+++.|....... .....++..+..|.|||+|.
T Consensus 31 ~~~pP~nl~v~~~~~~~~v~LsW~p~~~~~~~~~~~~~Y~v~~~~~~~~~w~~~~~~~--~~~~~~~~l~~~y~~rV~a~ 108 (380)
T 3lb6_C 31 KVNPPQDFEIVDPGYLGYLYLQWQPPLSLDHFKECTVEYELKYRNIGSETWKTIITKN--LHYKDGFDLNKGIEAXIHTL 108 (380)
T ss_dssp CCCCCEEEEEECCSSSSEEEEEEECCCC------CCCEEEEEEEETTCSSCEEEEESS--SEEEEECCTTSCEEEEEEEE
T ss_pred cCCcCCceEEEecCcCceEEEEECCCCCccccccceEEEEEEECCCCCCcceEEEecc--EEEEEeecCCCceEEEEEee
Confidence 35677778887766 6899999999875 2 223588999999998878898776543 23444566699999999999
Q ss_pred ec----CccCCCccccceEEecCCCCcccccccccceecccCCCCCCceEEEEecCCccEEEEeccccCcceEEEEEEEe
Q psy7040 131 NK----EGESEPLETFSSIIARDPYSKYTSVSSLDSHKRSNQPCGSGMVRKVQHLDYNTKLGVRMAQRADAGFYTVTAEN 206 (716)
Q Consensus 131 ~~----~g~~~~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~G~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n 206 (716)
|. .|.+.+|.....++...+..
T Consensus 109 ~~~~~~~g~g~~S~~s~~~~~~~~eg------------------------------------------------------ 134 (380)
T 3lb6_C 109 LPWQCTNGSEVQSSWAETTYWISPQG------------------------------------------------------ 134 (380)
T ss_dssp CCHHHHSSSCCBCCCEEEEECCCCCS------------------------------------------------------
T ss_pred cCCcccCCccCccccchhhcccCCCC------------------------------------------------------
Confidence 75 67776665544443221111
Q ss_pred CCCCceeEEEEEEecCCCCCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCCCCCeEEcccc---CcccceE
Q psy7040 207 INGKDSVEVEVIVLDKPSPPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEATGRWTPAGET---EGPVTGL 283 (716)
Q Consensus 207 ~~g~~~~~~~~~v~~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~---~~~~~~~ 283 (716)
.+|.+|.+ +.+.......+.++|+++... + ....|.+.+...+...+..+... .+....+
T Consensus 135 --------------~P~~~P~n-l~C~~~~~~~l~csW~p~~~~-~-~~~~Y~l~y~~~~~~~~~~C~~~~~~~g~~~~C 197 (380)
T 3lb6_C 135 --------------IPETXVQD-MDCVYYNWQYLLCSWKPGIGV-L-LDTNYNLFYWYEGLDHALQCVDYIKADGQNIGC 197 (380)
T ss_dssp --------------CTTSSCEE-EEEEEETTTEEEEEEECC--------CCEEEEEECTTCSSCEECSEEEEC--CEEEE
T ss_pred --------------CCCCCCcE-eEEEECCCcEEEEEEcCCCCC-C-CCccEEEEEEECCCCccccCCCccccCCceEEE
Confidence 25667777 788888889999999975532 2 46789999987665555555321 1223345
Q ss_pred EEc--CCCCCCeEEEEEEEEcCCCCCCCCcccceEEecCCCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEE
Q psy7040 284 EVE--GLIPNHKYKFRVRAVNKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYII 361 (716)
Q Consensus 284 ~i~--~L~p~~~y~~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v 361 (716)
.+. ++.+++.|.++|.|.|..|....... .+.. .....|.+|.++.+.....+.+.|+|.+|....+..+.+|+|
T Consensus 198 ~~~~~~~~~~~~Y~i~V~a~n~~G~~~s~~~--~~~~-~~~v~p~pP~~l~v~~~~~~~l~l~W~~P~~~~~~~~l~Yev 274 (380)
T 3lb6_C 198 RFPYLEASDYKDFYICVNGSSENKPIRSSYF--TFQL-QNIVKPLPPVYLTFTRESSCEIKLKWSIPLGPIPARCFDYEI 274 (380)
T ss_dssp ECCCCTTCSSSCEEEEEEEC-----CCCEEE--EECG-GGSCCCCCCEEEEEC-------CEEEECCSSSCCSTTEEEEE
T ss_pred EeCCCcccceeEEEEEEEEEcCCeeeccccE--EEcH-HHcccCCCCceEEEEEcCCCeEEEEECCCCCCCCcceEEEEE
Confidence 555 56888999999999998776533221 1111 122468889899988777789999999987554456789999
Q ss_pred EEeecCCCceEEEeeecCCCCeEEecC-CCCCCeEEEEEEEEeC---CCCCCCCCCCCceE
Q psy7040 362 EKKEKYSPIWEKCAQTEGDTPKGKVLD-LIEGNQYEFRVLAVNK---GGPGEPSDPTAPHI 418 (716)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~i~~-l~~~~~Y~~~v~a~n~---~g~~~~s~~~~~~~ 418 (716)
+|+..+ ..|..... ..++.+.+ |.+++.|.|+|+|... .+.|.+|+.+....
T Consensus 275 ~y~~~~-~~w~~~~~----~~~~~l~~~L~p~t~Y~~qVRa~~~~~~~~~g~WSeWS~~~~ 330 (380)
T 3lb6_C 275 EIREDD-TTLVTATV----ENETYTLKTTNETRQLCFVVRSKVNIYCSDDGIWSEWSDKQC 330 (380)
T ss_dssp CC---------CCEE----SSSCC------------CCEEEEECTTTCSSCCCCCCCCC--
T ss_pred EEEeCC-CCceEecc----cceEEEeCccCCCcEEEEEEEEEEcccCCCCCCCCCCCCCEE
Confidence 998853 45654332 12577888 9999999999999954 23444555544433
No 47
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=99.85 E-value=2e-20 Score=171.93 Aligned_cols=182 Identities=24% Similarity=0.319 Sum_probs=141.3
Q ss_pred CCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCCcEEEeccc-----CCCeEEecCCCCCcEEEEEEEEEe
Q psy7040 57 PEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETGVWIPVGKT-----REPEMDVTGLTPGHEYKFRVKALN 131 (716)
Q Consensus 57 p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~-----~~~~~~i~~L~~~~~y~~~v~a~~ 131 (716)
+|..+.+...+. ++.|+|++|..++|.++.+|.|+|+..+...|..+... ..+++.|.+|.|++.|.|+|+|.|
T Consensus 11 ~P~~~~~~~~~~-s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n 89 (209)
T 2vkw_A 11 SPSIDQVEPYSS-TAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALN 89 (209)
T ss_dssp CCEEEEEEECSS-CEEEEEECCSCCCSSCCCEEEEEEEESSCCCCEEEEEEHHHHHHHSEEEECCCCTTCEEEEEEEEEE
T ss_pred CCcccEeeeccC-eEEEEEcCCCcCCCcceeEEEEEEeeCCCCCceEeEeeccCCCccceEEeCCCCCCCeEEEEEEEEc
Confidence 344466666666 79999999977777789999999998888888665432 246899999999999999999999
Q ss_pred cCccCCCccccceEEecCCCCcccccccccceecccCCCCCCceEEEEecCCccEEEEeccccCcceEEEEEEEeCCCCc
Q psy7040 132 KEGESEPLETFSSIIARDPYSKYTSVSSLDSHKRSNQPCGSGMVRKVQHLDYNTKLGVRMAQRADAGFYTVTAENINGKD 211 (716)
Q Consensus 132 ~~g~~~~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~G~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~ 211 (716)
..|.+.++......+...
T Consensus 90 ~~G~~~~s~~~~~~T~~~-------------------------------------------------------------- 107 (209)
T 2vkw_A 90 GKGLGEISAASEFKTQPV-------------------------------------------------------------- 107 (209)
T ss_dssp TTEECCCCCCEEEECCCS--------------------------------------------------------------
T ss_pred CCcccCCcccccccccCC--------------------------------------------------------------
Confidence 999888775543322110
Q ss_pred eeEEEEEEecCCCCCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCCCCCeEEccccCcccceEEEcCCCCC
Q psy7040 212 SVEVEVIVLDKPSPPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEATGRWTPAGETEGPVTGLEVEGLIPN 291 (716)
Q Consensus 212 ~~~~~~~v~~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~ 291 (716)
.+|.+|.. +.+.....+++.|+|.+|. +++.++.+|.|+++. ....|............+.|.+|.|+
T Consensus 108 ---------~~P~~P~~-~~~~~~~~~sv~l~W~~p~-~~~~~i~~Y~v~~~~-~~~~~~~~~~~~~~~~~~~i~~L~p~ 175 (209)
T 2vkw_A 108 ---------REPSAPKL-EGQMGEDGNSIKVNLIKQD-DGGSPIRHYLVRYRA-LSSEWKPEIRLPSGSDHVMLKSLDWN 175 (209)
T ss_dssp ---------CSCCCCEE-EEEECTTSSCEEEEEECCC-CTTSCCCEEEEEEEE-TTSCCCCCEEECTTCCEEEECSCCTT
T ss_pred ---------CCCCCCcc-cccccccCCeEEEEEECcc-cCCCCCceEEEEEEC-CCCCCceeeecCCCccEEEecCCCCC
Confidence 14666665 6666777899999999884 445589999999987 55566555444456689999999999
Q ss_pred CeEEEEEEEEcCCCCCCCCccc
Q psy7040 292 HKYKFRVRAVNKQGKSEPLTTT 313 (716)
Q Consensus 292 ~~y~~~v~a~n~~g~~~~~~~~ 313 (716)
+.|.|+|+|.|..|.+.++...
T Consensus 176 t~Y~~~V~A~n~~G~s~~S~~~ 197 (209)
T 2vkw_A 176 AEYEVYVVAENQQGKSKAAHFV 197 (209)
T ss_dssp CEEEEEEEEEETTEECCCEEEE
T ss_pred CEEEEEEEEEeCCccCCcchhh
Confidence 9999999999999988776654
No 48
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=99.85 E-value=5e-20 Score=170.14 Aligned_cols=191 Identities=20% Similarity=0.348 Sum_probs=145.9
Q ss_pred CCCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCC-CcEEEecc-------------cCCCeEEecCCCCC
Q psy7040 55 LDPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPET-GVWIPVGK-------------TREPEMDVTGLTPG 120 (716)
Q Consensus 55 ~~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~-~~~~~~~~-------------~~~~~~~i~~L~~~ 120 (716)
+.||.++.+..++.+++.|+|++|...+ .++.+|.|+|+..+. ..|..+.. .....+.|.+|.++
T Consensus 2 ~~pP~~~~~~~~~~~sv~l~W~~p~~~~-~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~ 80 (214)
T 2ibg_A 2 TYPPTPPNVTRLSDESVMLRWMVPRNDG-LPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQ 80 (214)
T ss_dssp CCCCCCCEEEEEETTEEEEEEEEECCSS-CCEEEEEEEEEESSSSCCCEECSCCEECCSSSCSSSSEEEEEEEECSCCTT
T ss_pred CCCCCCCEeeEecCCEEEEEEECCCCCC-CCceEEEEEEEECCCCCcCcccccccCccccccccccCcceeEEecCCcCC
Confidence 5688888999999999999999987554 579999999998654 67776553 23468899999999
Q ss_pred cEEEEEEEEEecCccCCCccccceEEecCCCCcccccccccceecccCCCCCCceEEEEecCCccEEEEeccccCcceEE
Q psy7040 121 HEYKFRVKALNKEGESEPLETFSSIIARDPYSKYTSVSSLDSHKRSNQPCGSGMVRKVQHLDYNTKLGVRMAQRADAGFY 200 (716)
Q Consensus 121 ~~y~~~v~a~~~~g~~~~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~G~~~~~~~~~~~~~~~l~i~~l~~~~~g~y 200 (716)
+.|.|+|+|.|..|.+..+.....+.......
T Consensus 81 t~Y~~~V~A~n~~g~~~~s~~s~~~~~~~~~~------------------------------------------------ 112 (214)
T 2ibg_A 81 HTYRFRILAVYSNNDNKESNTSAKFYLQPGAA------------------------------------------------ 112 (214)
T ss_dssp CEEEEEEEEEETTSCEEECCCCCCEECCCSTT------------------------------------------------
T ss_pred CEEEEEEEEEecCCCCCCCCCcccEEeccCcC------------------------------------------------
Confidence 99999999999999776665333222110000
Q ss_pred EEEEEeCCCCceeEEEEEEecCCCCCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCCC-CCeEEccccCcc
Q psy7040 201 TVTAENINGKDSVEVEVIVLDKPSPPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEAT-GRWTPAGETEGP 279 (716)
Q Consensus 201 ~c~a~n~~g~~~~~~~~~v~~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~-~~~~~~~~~~~~ 279 (716)
..+|.+|.+ +.+.....+++.|+|++|....+..+.+|.|+++..+. ..|.........
T Consensus 113 -------------------~~~~~~P~~-~~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~ 172 (214)
T 2ibg_A 113 -------------------LDPMPVPEL-LEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKATIEGAH 172 (214)
T ss_dssp -------------------SCCCCCCEE-CCCBCCSSSCEEEEEECCTTCCGGGCCEEEEEEEETTCCSCCEEEEEECTT
T ss_pred -------------------CCCCCCCcc-cEEEEccCCeEEEEEeCCCccCCCCcceEEEEEEECCCCcceEEeeccCCc
Confidence 013445555 66777788899999998864455579999999987766 677766554445
Q ss_pred cceEEEcCCCCCCeEEEEEEEEcCCCCCCCCcccc
Q psy7040 280 VTGLEVEGLIPNHKYKFRVRAVNKQGKSEPLTTTA 314 (716)
Q Consensus 280 ~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~~~~~~ 314 (716)
...+.|.+|.|++.|.|+|+|.|..|.+.++....
T Consensus 173 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~ 207 (214)
T 2ibg_A 173 ARSFKIAPLETATMYEFKLQSFSAASASEFSALKQ 207 (214)
T ss_dssp CCEEEECSCCTTCEEEEEEEEECSSCBCCCCCCEE
T ss_pred ceEEEeCCCCCCCEEEEEEEEEcCCccCCCcceEe
Confidence 68999999999999999999999999888776653
No 49
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.85 E-value=2.6e-19 Score=175.87 Aligned_cols=263 Identities=23% Similarity=0.303 Sum_probs=187.3
Q ss_pred CCcccccccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccC-CcEEEE-eCCCeEEEEECCCCCCCceeEEEEEE
Q psy7040 425 SPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISK-DRFKIV-NDDKSTKLKVFDSKRGDSGIYTLAVK 502 (716)
Q Consensus 425 ~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~-~~~~~~-~~~~~~~l~i~~l~~~~~~~y~~~a~ 502 (716)
+|.+.. .+..+.+..|+.+.|.|.+.+.|.+.+.|++++..+... .++.+. ..+....|.|.++...|.|.|+|.|.
T Consensus 4 ~P~~~~-~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 82 (305)
T 2nzi_A 4 APHFKE-ELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRAT 82 (305)
T ss_dssp CCEEEE-CCCCEEECTTCCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEEEE
T ss_pred CCeeee-cccceEEeCCCcEEEEEEEeCCCCCeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEEEE
Confidence 455442 245688999999999999999999999999999888643 345544 34556799999999999999999999
Q ss_pred cCCCceeeEEEEEEEEEEEEEeCCC----------CCCCCceeeEEEEEEecCCCceeeeEEEccceeeeec-----ccc
Q psy7040 503 NSWGTDKGTAKVTVLGCSLKWNPPE----------DDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTID-----NVD 567 (716)
Q Consensus 503 n~~g~~~~s~~~~v~~v~l~W~~p~----------~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~-----~~~ 567 (716)
|..|....+..+.+..... ...+. ..+......|.+...+ .+.+.|++.+....... ...
T Consensus 83 n~~g~~~~~~~l~V~~~p~-~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p----~p~i~W~~~~~~~~~~~~~~~~~~~ 157 (305)
T 2nzi_A 83 NQGGSVSGTASLEVEVPAK-IHLPKTLEGMGAVHALRGEVVSIKIPFSGKP----DPVITWQKGQDLIDNNGHYQVIVTR 157 (305)
T ss_dssp ETTEEEEEEEEEEECEEEE-ECCCHHHHSSCCEEEETTCCEEEEEEEEEES----CCEEEEEESSSBCCSSSSCEEEECS
T ss_pred cCCCCccceEEEEEecCCc-cCCCccccccccEEecCCCEEEEEEEECCCC----CCEEEEEECCEECCCCCcEEEEEcC
Confidence 9999877777776651111 11110 1122223445444433 34499999776543211 112
Q ss_pred ceeEEEEcC-CCCCCeEEEEEEEEcCCCCCccceeeeccCCCCCCcc--ceeeccceeEEEEE---------EeeEEEEe
Q psy7040 568 YFTKITIRP-LQRSDTAQYTVTATNSQGKDQVFIEVVVTDKPSAPEG--PIQWLLTLTDVTWE---------ISNYLQEL 635 (716)
Q Consensus 568 ~~~~~~i~~-L~~~~~y~~~v~a~n~~G~~~~s~~~~v~~~p~~~~~--~~~~~~~~v~l~w~---------i~~y~v~~ 635 (716)
....+.|.+ +...+.|.|+|.|.|..|....+..+.|..+|..|.. +..+..+.+.|.|. +.+|.+++
T Consensus 158 ~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~p~~~~~~~~~~~~v~l~w~~p~~~g~~~i~~y~v~~ 237 (305)
T 2nzi_A 158 SFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVPDPPRGVKVSDVSRDSVNLTWTEPASDGGSKITNYIVEK 237 (305)
T ss_dssp SEEEEEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEEEEEESCCSSCEEEEEECCSCCSBSCEEEEEEEE
T ss_pred CceEEEEecCCccCccEEEEEEEEeCCCceeeEEEEEEecCCCCCCCceeeeccCCEEEEEEcCCccCCCCceeEEEEEE
Confidence 346788998 9999999999999999998877777776555555542 44567889999997 67888877
Q ss_pred eeeccCceeeEEEEeCCeEeeecccceeeEEEEccCCCCCcEEEEEEEEcCCCCceeeEEEE-EecCCCCC
Q psy7040 636 HSSLMPISLESQYLMNDKRVTIDNVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVV-VTDKPSAP 705 (716)
Q Consensus 636 ~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~y~~~a~n~~G~~~~s~~l~-v~~~p~~p 705 (716)
+... ...|.+.+... ...|.|.+|.+++.|.|+|.|.|..|.+..+.... +.+++.+|
T Consensus 238 ~~~~-----~~~w~~~~~~~-------~~~~~i~~l~~~~~y~~~~~A~N~~G~~~~S~~~~~~~t~~~~p 296 (305)
T 2nzi_A 238 CATT-----AERWLRVGQAR-------ETRYTVINLFGKTSYQFRVIAENKFGLSKPSEPSEPTITKEDKT 296 (305)
T ss_dssp EETT-----SCCEEEEEEES-------SSEEEECSCCSSCEEEEEEEEEETTEECCCCCCCCCEECCC---
T ss_pred ecCC-----CCccEECcccc-------CceEEecCCCCCCeEEEEEEEEeCCcccCCcCCCCCEEcCCccc
Confidence 6532 56788765543 36799999999999999999999999997765443 44444444
No 50
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.84 E-value=4.6e-19 Score=188.32 Aligned_cols=395 Identities=13% Similarity=0.081 Sum_probs=229.0
Q ss_pred CccEEEEeccccCcceEEEEEEEeCCCCceeEEEEEEecCCCCCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEE
Q psy7040 183 YNTKLGVRMAQRADAGFYTVTAENINGKDSVEVEVIVLDKPSPPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDK 262 (716)
Q Consensus 183 ~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~ 262 (716)
....|.|.+++..|+|.|+|.|.| |. +..+.|.|..+|.+...+-......++.+.|.|..... +...+.+..
T Consensus 78 ~~~~L~I~~~~~~D~G~Y~C~a~n--g~-~~~~~l~V~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~----~~~~v~W~~ 150 (524)
T 2ec8_A 78 KQNEWITEKAEATNTGKYTCTNKH--GL-SNSIYVFVRDPAKLFLVDRSLYGKEDNDTLVRCPLTDP----EVTNYSLKG 150 (524)
T ss_dssp CSSEEEESSCCSTTCEEEEEEETT--SC-EEEEEEECCCSSCSBCCCCCCCEETTSCEEECCCBSCC----CCSCEEEEC
T ss_pred ccceEEEcccchhhCEEEEEeecC--Cc-ceEEEEEECCCCcccccccceEEEcCCeEEEECcCCCC----ccceEEEEc
Confidence 468999999999999999999999 54 77788888766644332223445578899999996432 222333322
Q ss_pred EeCCC---CCeEEccccCcccceEEEcCCCCCCeE-EEEEEEEcCCCCCCCCcccceEEec-CCCCCC---CCCCCcEEE
Q psy7040 263 MDEAT---GRWTPAGETEGPVTGLEVEGLIPNHKY-KFRVRAVNKQGKSEPLTTTASIEAK-NPFNQP---GKPGTPEIK 334 (716)
Q Consensus 263 ~~~~~---~~~~~~~~~~~~~~~~~i~~L~p~~~y-~~~v~a~n~~g~~~~~~~~~~~~~~-~~~~~p---~~p~~~~~~ 334 (716)
.+... ...... .....+.|.++...+.+ .|+|.|.|..|........ +.+. .+..+| ..|.. ..
T Consensus 151 ~~g~~l~~~~~~~~----~~~~~L~i~~~~~~d~G~~Y~C~a~n~~~~~~s~~~~--l~V~~~~~~~p~i~~~~~~--~~ 222 (524)
T 2ec8_A 151 CQGKPLPKDLRFIP----DPKAGIMIKSVKRAYHRLCLHCSVDQEGKSVLSEKFI--LKVRPAFKAVPVVSVSKAS--YL 222 (524)
T ss_dssp SSSCCCCSSCEEEE----ETTTEEEEESCCGGGTTCEEEEEEC----CCCCCCEE--CCEECCCCSCCEEECSCSE--EE
T ss_pred cCCcCcCCCCceeE----CCCccEEEeccchhhCCceEEEEEEECCceEEEEEEE--EEEEeCCCCCCcEEecCCc--ce
Confidence 11110 111111 12457999999999999 9999999876543211111 1111 011112 12222 23
Q ss_pred eeeCCeEEEEecCCCCCCCccceEEEEEEeecCCC---ceEEEeee-----cCCCCeEEecCCCCCCeEEEEEEEEeCCC
Q psy7040 335 DFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSP---IWEKCAQT-----EGDTPKGKVLDLIEGNQYEFRVLAVNKGG 406 (716)
Q Consensus 335 ~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~---~~~~~~~~-----~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g 406 (716)
...+..+.|.|.....+ .. ..+.|...+.. ........ ......+.|.++...+.+.|+|.|.|..|
T Consensus 223 v~~G~~v~L~C~~~g~p----~p-~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g 297 (524)
T 2ec8_A 223 LREGEEFTVTCTIKDVS----SS-VYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFG 297 (524)
T ss_dssp EETTSCEEEEEEEEESS----TT-CEEEEEETTCSCCCCEEEEEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSSC
T ss_pred EEcCCcEEEEEEEecCC----Cc-EEEEEEeCCCCCccccccccccccCCccceEEEEEECCCCHHHCEEEEEEEEecCC
Confidence 34566777777652211 11 11233322212 11111111 12345788999999999999999999887
Q ss_pred CCCCCCCCCceEeecCCCCCccccc--ccccEEEecCCeEEEEEEEeccCCCe-EEEEeCCeEeccCC-cEEEEeCC---
Q psy7040 407 PGEPSDPTAPHIARAKKVSPYINRD--QLSDIKVRAGSNFEFDINVIGEPIPT-KEWLCNDITIISKD-RFKIVNDD--- 479 (716)
Q Consensus 407 ~~~~s~~~~~~~~~~~~~~P~~~~~--~~~~~~~~~g~~~~~~~~v~~~p~~~-~~W~~~~~~~~~~~-~~~~~~~~--- 479 (716)
.... .....+. .+|.+... ......+..|..+.|.|.+.+.|.+. +.|++++..+.... ++.....+
T Consensus 298 ~~~~---~~~l~V~---~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~~v~W~k~g~~~~~~~~~~~~~~~~~~~ 371 (524)
T 2ec8_A 298 SANV---TTTLEVV---DKGFINIFPMINTTVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSENESNI 371 (524)
T ss_dssp EEEE---EEEEEEE---SSCEEEEEESSCSEEEECTTCCEEEEEEEEEESCCCEEEEESSSCBCSSSBCCEESCCSSSCC
T ss_pred ceEE---EEEEEEe---ccCceEeecCCCceEEEcCCCcEEEEEEEeecCCCcEEEEEECCeeccCCccceeEEccCCCc
Confidence 6432 1111121 24444322 23468899999999999999999999 99999998876554 33322222
Q ss_pred -CeEEEEECCCCCCCceeEEEEEEcCCCceeeEEEEEEE-EEEEEEeCCCCCCCCceeeEEEEEEecCCCceeeeEEEcc
Q psy7040 480 -KSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVL-GCSLKWNPPEDDGGAPIEYYMVEKMETDTGKVLIKWIRTN 557 (716)
Q Consensus 480 -~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v~-~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~ 557 (716)
....|.|.++...|.|.|+|.|.|..|....++.+.+. ...+.-..... .| ...|.+...+.. .+.|++.+
T Consensus 372 ~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P~i~~~~~~~-~g--~l~C~~~g~P~p----~i~W~~~~ 444 (524)
T 2ec8_A 372 RYVSELHLTRLKGTEGGTYTFLVSNSDVNAAIAFNVYVNTKPEILTYDRLV-NG--MLQCVAAGFPEP----TIDWYFCP 444 (524)
T ss_dssp EEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECEEEEEEEEECCS-SS--CEEEEEEEESCC----EEECCCC-
T ss_pred eeEEEEEEeecCcccCeEEEEEEEecCceEEEEEEEEEecCCeEeecccCc-Cc--EEEEEEEeecCC----EEEEEECC
Confidence 35689999999999999999999999998888877777 22222222222 22 455666554444 49999875
Q ss_pred ceeee----------e---ccccceeEEE----EcCCCCCCeEEEEEEEEcCCCCCccceeeeccCCCCC
Q psy7040 558 DKRVT----------I---DNVDYFTKIT----IRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTDKPSA 610 (716)
Q Consensus 558 ~~~~~----------~---~~~~~~~~~~----i~~L~~~~~y~~~v~a~n~~G~~~~s~~~~v~~~p~~ 610 (716)
..... . ........+. +......+.+.|+|.|.|..|.......+.|.++|..
T Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~l~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~V~e~~~~ 514 (524)
T 2ec8_A 445 GTEQRCSASVLPVDVQTLNSSGPPFGKLVVQSSIDSSAFKHNGTVECKAYNDVGKTSAYFNFAFKGNNKE 514 (524)
T ss_dssp ---------CCCCCCCCCCC-CCSSSCEEEEEEECCCSCCC-----CEEECSSCEEECCCCCCC------
T ss_pred CcccccccccCCCCceeeeeccCCCCcceEEEEEEEEEccCCEEEEEEEEcCCCceEEEEEEEEecCCHH
Confidence 43210 0 0001112222 3434468899999999999998877777777666543
No 51
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.84 E-value=1.5e-19 Score=177.62 Aligned_cols=218 Identities=23% Similarity=0.368 Sum_probs=171.2
Q ss_pred CCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccCCCeEEE
Q psy7040 381 TPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEW 460 (716)
Q Consensus 381 ~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W 460 (716)
...+.|.++...+.+.|+|.|.|..|....+... .+...+....|.. ......+.+..|..+.|.|.+.+.|.+.+.|
T Consensus 61 ~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l-~V~~~p~~~~~~~-~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W 138 (305)
T 2nzi_A 61 YHQLIIASVTDDDATVYQVRATNQGGSVSGTASL-EVEVPAKIHLPKT-LEGMGAVHALRGEVVSIKIPFSGKPDPVITW 138 (305)
T ss_dssp EEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEE-EECEEEEECCCHH-HHSSCCEEEETTCCEEEEEEEEEESCCEEEE
T ss_pred EEEEEEccCChhhCeEEEEEEEcCCCCccceEEE-EEecCCccCCCcc-ccccccEEecCCCEEEEEEEECCCCCCEEEE
Confidence 3479999999999999999999987753211111 1111111111111 1122457788999999999999999999999
Q ss_pred EeCCeEeccCCcEEEEeCCCeEEEEECC-CCCCCceeEEEEEEcCCCceeeEEEEEEE-----------------EEEEE
Q psy7040 461 LCNDITIISKDRFKIVNDDKSTKLKVFD-SKRGDSGIYTLAVKNSWGTDKGTAKVTVL-----------------GCSLK 522 (716)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~l~i~~-l~~~~~~~y~~~a~n~~g~~~~s~~~~v~-----------------~v~l~ 522 (716)
++++..+....++.+........|.|.+ +.+.|.|.|+|.|.|..|....+..+.+. ++.|+
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~p~~~~~~~~~~~~v~l~ 218 (305)
T 2nzi_A 139 QKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVPDPPRGVKVSDVSRDSVNLT 218 (305)
T ss_dssp EESSSBCCSSSSCEEEECSSEEEEEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEEEEEESCCSSCEEEE
T ss_pred EECCEECCCCCcEEEEEcCCceEEEEecCCccCccEEEEEEEEeCCCceeeEEEEEEecCCCCCCCceeeeccCCEEEEE
Confidence 9999988877888887777788999999 99999999999999999998888877776 78999
Q ss_pred EeCCCCCCCCceeeEEEEEEecCCCceeeeEEEccceeeeeccccceeEEEEcCCCCCCeEEEEEEEEcCCCCCccceee
Q psy7040 523 WNPPEDDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDNVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEV 602 (716)
Q Consensus 523 W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~~~ 602 (716)
|.+|..+++..+..|.+++.+... ..|........ ..+.|.+|.+++.|.|+|.|.|..|.|.++...
T Consensus 219 w~~p~~~g~~~i~~y~v~~~~~~~----~~w~~~~~~~~--------~~~~i~~l~~~~~y~~~~~A~N~~G~~~~S~~~ 286 (305)
T 2nzi_A 219 WTEPASDGGSKITNYIVEKCATTA----ERWLRVGQARE--------TRYTVINLFGKTSYQFRVIAENKFGLSKPSEPS 286 (305)
T ss_dssp EECCSCCSBSCEEEEEEEEEETTS----CCEEEEEEESS--------SEEEECSCCSSCEEEEEEEEEETTEECCCCCCC
T ss_pred EcCCccCCCCceeEEEEEEecCCC----CccEECccccC--------ceEEecCCCCCCeEEEEEEEEeCCcccCCcCCC
Confidence 999888788889999999998887 89988765442 889999999999999999999999999988877
Q ss_pred e-ccCCCCCCc
Q psy7040 603 V-VTDKPSAPE 612 (716)
Q Consensus 603 ~-v~~~p~~~~ 612 (716)
. +..++..|.
T Consensus 287 ~~~~t~~~~p~ 297 (305)
T 2nzi_A 287 EPTITKEDKTR 297 (305)
T ss_dssp CCEECCC----
T ss_pred CCEEcCCcccc
Confidence 6 444444444
No 52
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.84 E-value=3.1e-19 Score=185.86 Aligned_cols=415 Identities=12% Similarity=-0.005 Sum_probs=227.3
Q ss_pred EeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCCCCCeEEccc--cCcccceEEEcCCCCCCeEEEEEEEEcCCCCCCC
Q psy7040 232 VSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEATGRWTPAGE--TEGPVTGLEVEGLIPNHKYKFRVRAVNKQGKSEP 309 (716)
Q Consensus 232 ~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~--~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~ 309 (716)
.....++.++|.|.... +.. .+. .++ ..|..... .......|.|.++.. +.+ |+|.|.+..+....
T Consensus 9 ~~v~~G~~v~L~C~~~g-p~p-~~~--~~~------~~w~k~~~~~~~~~~~~l~i~~v~~-d~g-Y~C~a~~~~~~~~~ 76 (450)
T 1z7z_I 9 VILPRGGSVLVTCSTSC-DQP-MLL--GIE------TPLPKKELLLPGNNRKVYELSNVQE-DSQ-PMCYSNCPDGQSTA 76 (450)
T ss_dssp EEEETTEEEEEEEECCS-SCC-CEE--EEC------SSSCEEECCSSTTTEEEEEEEEECS-CBC-CEEEEEETTEEEEE
T ss_pred eEEecCCcEEEEEEccC-CCc-ccc--ccc------ceeeecceEecCCCceEEEEEeccc-CCe-eEEEEeCCCCccee
Confidence 34457889999999633 111 110 000 02222211 012345788888887 777 99999764432211
Q ss_pred CcccceEEecCC-CCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecC
Q psy7040 310 LTTTASIEAKNP-FNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLD 388 (716)
Q Consensus 310 ~~~~~~~~~~~~-~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~ 388 (716)
...+.+..+ ......|.+..+ ..+..+.|.|...... +...+.|.|...+..-.............+.|..
T Consensus 77 ---~~~l~V~~~P~~~~~~~~~~~v--~~G~~v~L~C~~~g~~---~~~~~~v~W~k~g~~l~~~~~~~~~~~~~L~i~~ 148 (450)
T 1z7z_I 77 ---KTFLTVYWTPERVELAPLPSWQ--PVGKNLTLRCQVEGGA---PRANLTVVLLRGEKELKREPAVGEPAEVTTTVLV 148 (450)
T ss_dssp ---ECEEEEEBCCSEEEECCCCSEE--CTTSEEEEEEEEECCB---CGGGEEEEEEETTEEEEEEECCTTTEEEEEEEEC
T ss_pred ---EEEEEEEeCCCcceecCCCceE--eeCCeEEEEEEecCCC---CCcCcEEEEeeCCEEeecccccccccceEEEEEe
Confidence 111222211 000012222222 3466788888763221 2222344554433110000001112234788999
Q ss_pred CCCCCeEEEEEEEEeCCCCCCC------CCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEecc-C--CCeEE
Q psy7040 389 LIEGNQYEFRVLAVNKGGPGEP------SDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGE-P--IPTKE 459 (716)
Q Consensus 389 l~~~~~Y~~~v~a~n~~g~~~~------s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~-p--~~~~~ 459 (716)
+...+.+.|+|.|.|..|.... +..........+..+|.+. ....+..|+.+.|.|.+.+. | .+.+.
T Consensus 149 ~~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~~~~~p~~~----~~~~v~~G~~v~l~C~~~g~~P~~~~~~~ 224 (450)
T 1z7z_I 149 RRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLV----SPRVLEVDTQGTVVCSLDGLFPVSEAQVH 224 (450)
T ss_dssp CSSCSSCEEEEEEEEECGGGTSCEEEEECCCEECEECCCCSSCCEEE----CCSEEETTSEEEEEEEEESCTTGGGCEEE
T ss_pred eccccCceEEEEEEcccCCCCceEEeeccCccceeeeccCCCCCEec----CceeEEeCCcEEEEEEeeCCCCCCceEEE
Confidence 9999999999999999774321 0111111111112334432 12678999999999999998 7 78999
Q ss_pred EEeCCeEeccCCcEEEEeCCCeEEEE-ECCCCCCCce--eEEEEEEcCCCceeeEEEEEEE---EEEEEEeCC-CCCCCC
Q psy7040 460 WLCNDITIISKDRFKIVNDDKSTKLK-VFDSKRGDSG--IYTLAVKNSWGTDKGTAKVTVL---GCSLKWNPP-EDDGGA 532 (716)
Q Consensus 460 W~~~~~~~~~~~~~~~~~~~~~~~l~-i~~l~~~~~~--~y~~~a~n~~g~~~~s~~~~v~---~v~l~W~~p-~~~~~~ 532 (716)
|++++..+.. .+. .......+. ..++...|.| .|+|.|.|..|.......+.+. ...+.-... ...+..
T Consensus 225 W~~~~~~~~~--~~~--~~~~~~~~~~~~~v~~~d~G~~~Y~C~a~n~~g~~~~~~~l~V~~~~~p~i~~~~~~v~~G~~ 300 (450)
T 1z7z_I 225 LALGDQRLNP--TVT--YGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPAPNVILTKPEVSEGTE 300 (450)
T ss_dssp EEETTEECCC--EEE--EETTEEEEEEEEECCGGGCEEEEEEEEEEETTEEEEEEEEEEEECCCCCEEEESCSEEETTCE
T ss_pred EeCCCEeCCc--eEE--ecCCceeEEEEEEeEhhhCCcEEEEEEEccCCccEEEEEEEEEecCCCCeEecCCeeEeCCCc
Confidence 9999988754 222 222222222 2277899988 9999999999988777777766 222222111 111222
Q ss_pred ceeeEEEEEEecCCCceeeeEEEccceeeeeccccceeEEEEcCCCCCCeEEEEEEEEcCCC-CCc---cceeeeccCCC
Q psy7040 533 PIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDNVDYFTKITIRPLQRSDTAQYTVTATNSQG-KDQ---VFIEVVVTDKP 608 (716)
Q Consensus 533 ~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~G-~~~---~s~~~~v~~~p 608 (716)
....|.+. +.+.+.| .+.... .......+.|..+...+.+.|+|.|.|..| ... .+..+.|..+|
T Consensus 301 v~l~C~~~------p~p~i~W--~g~~~~---~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~V~~~P 369 (450)
T 1z7z_I 301 VTVKCEAH------PRAKVTL--NGVPAQ---PLGPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGP 369 (450)
T ss_dssp EEEEEEC---------------------------CCCCCEEEECCGGGTTCEEEEEEEEEETTEEEEEEEEEECEEEEEE
T ss_pred EEEEEecC------CCCEeEE--CCEEcC---CCCceEEEEEecCcccCCceEEEEEEcCCCCcccccceeEEEEEecCC
Confidence 22333332 3444889 333221 111235789999999999999999997554 322 33333354444
Q ss_pred CCCccceeeccceeEEEEEEeeEEEEeeeeccCcee----eEEEEeCCeEeeecccceeeEEEEccCCCCCcEEEEEEEE
Q psy7040 609 SAPEGPIQWLLTLTDVTWEISNYLQELHSSLMPISL----ESQYLMNDKRVTIDNVDYFTKITIRPLQRSDTAQYTVTAT 684 (716)
Q Consensus 609 ~~~~~~~~~~~~~v~l~w~i~~y~v~~~~~~~~~~~----~~~W~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~y~~~a~ 684 (716)
.... .. ....+.+ ..|-.+ .|.|.+.| .+.|+++|..+.... ..+ .+...|+|.|+|.|.
T Consensus 370 ~~~~-~~--~p~~~~~---~~g~~~---~l~C~~~g~P~p~i~W~~~g~~~~~~g----~~~---~v~~~d~G~Y~C~a~ 433 (450)
T 1z7z_I 370 RLDE-RD--CPGNWTW---PENSQQ---TPMCQAWGNPLPELKCLKDGTFPLPIG----ESV---TVTRDLEGTYLCRAR 433 (450)
T ss_dssp ECCS-TT--SCSEEEE---ETTCEE---CCCCCCEEESCCEEEEEETTTEECCTT----SCE---ECCGGGCEEEEEEEE
T ss_pred ceee-cc--CCCceeE---cCCCeE---EEEEecccCCCCcEEEEECCcccCCCC----CeE---eEehhhCeEEEEEEE
Confidence 3222 10 0011110 012222 38898888 899999998554431 112 688899999999999
Q ss_pred cCCCCceeeEEEEEecC
Q psy7040 685 NSQGKDQVFIEVVVTDK 701 (716)
Q Consensus 685 n~~G~~~~s~~l~v~~~ 701 (716)
|..|....++.|.|..+
T Consensus 434 N~~G~~~~~~~l~V~~~ 450 (450)
T 1z7z_I 434 STQGEVTREVTVNVLSP 450 (450)
T ss_dssp ETTEEEEEEEEEEEECC
T ss_pred eCCCceeEEEEEEEEcC
Confidence 99999999999999764
No 53
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=99.84 E-value=1.3e-19 Score=166.81 Aligned_cols=189 Identities=20% Similarity=0.286 Sum_probs=143.5
Q ss_pred CCCCCCCCeEEeEEeCCeEEEEEECCCCC---CCCccceEEEEEEeCCCCCeEEccccCcccceEEEcCCCCCCeEEEEE
Q psy7040 222 KPSPPGGPLKVSNVHAEGVTLDWKVPDDD---GGQPIEKYVVDKMDEATGRWTPAGETEGPVTGLEVEGLIPNHKYKFRV 298 (716)
Q Consensus 222 ~p~~p~~~~~~~~~~~~~~~l~W~~p~~~---~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v 298 (716)
++.+|.+ +.+.....+++.|+|++|..+ ....+.+|.|+++..+...+.... .......+.|.+|.|++.|.|+|
T Consensus 4 P~~~P~~-l~~~~~~~~si~l~W~~p~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~-~~~~~~~~~i~~L~p~t~Y~~~V 81 (211)
T 3p4l_A 4 PMMPPVG-VQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKN-ANATTLSYLVTGLKPNTLYEFSV 81 (211)
T ss_dssp CCCCCEE-EEEEECSSSCEEEEEECTTSCTTCCCCSSCEEEEEEEECC---CCCEE-EEESSSEEEECSCCTTCEEEEEE
T ss_pred CCCCCCC-EEEEecCCCeEEEEEeCCCCCcccccCCCcEEEEEEEECCCCcceEEE-eCCCceEEEecCcCCCCEEEEEE
Confidence 5667777 888888899999999987533 134688999999876544322111 23456899999999999999999
Q ss_pred EEEcCCCCCCCCcccceEEecCCCCCCC-CCCCcEEEee--eCCeEEEEecCCCCCCCccceEEEEEEeecCCCc---eE
Q psy7040 299 RAVNKQGKSEPLTTTASIEAKNPFNQPG-KPGTPEIKDF--DTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPI---WE 372 (716)
Q Consensus 299 ~a~n~~g~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~--~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~---~~ 372 (716)
+|.|..|.+.++... .+.+....|. +|.++.+... +.+++.|+|.+|...++ .+.+|.|+++..+... |.
T Consensus 82 ~A~n~~g~~~~S~~~---~~~t~~~~P~~~P~~~~~~~~~~s~~sv~l~W~~p~~~~g-~i~~Y~v~~~~~~~~~~~~~~ 157 (211)
T 3p4l_A 82 MVTKGRRSSTWSMTA---HGTTFELVPTSPPKDVTVVSKEGKPKTIIVNWQPPSEANG-KITGYIIYYSTDVNAEIHDWV 157 (211)
T ss_dssp EEEETTEECCCCCCE---EEECCCCCCCSCCEEEEEEEETTEEEEEEEEEECCTTCCS-CCCEEEEEEESCTTSCGGGSE
T ss_pred EEEcCCCCCccceeE---eeecccCCCCCCCcceEEEecCCCCCEEEEEECCCCCCCC-CEEEEEEEEEECCCCCCCceE
Confidence 999999987766553 3344445666 8888988877 47899999999875444 8999999998765432 33
Q ss_pred EEeeecCCCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCce
Q psy7040 373 KCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPH 417 (716)
Q Consensus 373 ~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~ 417 (716)
. ........++.|.+|.+++.|.|+|+|.|..|.|++|.+....
T Consensus 158 ~-~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~ 201 (211)
T 3p4l_A 158 I-EPVVGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFR 201 (211)
T ss_dssp E-EEEESSCSEEEECCCCTTCEEEEEEEEEETTEECCCCCCEEEE
T ss_pred E-EEecCCeeEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEcc
Confidence 2 2345678899999999999999999999999999988764433
No 54
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=99.83 E-value=2e-19 Score=168.31 Aligned_cols=219 Identities=20% Similarity=0.274 Sum_probs=144.6
Q ss_pred CCCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCCcE-EEecccCCCeEEecCCCCCcEEEEEEEEEecC
Q psy7040 55 LDPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETGVW-IPVGKTREPEMDVTGLTPGHEYKFRVKALNKE 133 (716)
Q Consensus 55 ~~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~-~~~~~~~~~~~~i~~L~~~~~y~~~v~a~~~~ 133 (716)
+.||.+|.+..++.+++.|+|++|. +.+.+|.|+|+..+...+ ........+++.|.+|.|++.|.|+|+|.|..
T Consensus 6 ~~~P~~l~~~~~~~~si~l~W~~p~----g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~ 81 (234)
T 3f7q_A 6 LGAPQNPNAKAAGSRKIHFNWLPPS----GKPMGYRVKYWIQGDSESEAHLLDSKVPSVELTNLYPYCDYEMKVCAYGAQ 81 (234)
T ss_dssp CCCCEEEEEEECSSSCEEEEEECCS----SCCCEEEEEEEETTSCGGGCEEEEESSSEEEECSCCTTCEEEEEEEEEETT
T ss_pred CCCCcceEEEEcCCCEEEEEEECCC----CccceEEEEEEECCCCccceEEEcCCccEEEECCCCCCCEEEEEEEEEeCC
Confidence 4556668888999999999999972 359999999986654322 22223445899999999999999999999999
Q ss_pred ccCCCccccceEEecCCCCcccccccccceecccCCCCCCceEEEEecCCccEEEEeccccCcceEEEEEEEeCCCCcee
Q psy7040 134 GESEPLETFSSIIARDPYSKYTSVSSLDSHKRSNQPCGSGMVRKVQHLDYNTKLGVRMAQRADAGFYTVTAENINGKDSV 213 (716)
Q Consensus 134 g~~~~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~G~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~ 213 (716)
|.+.++......+.
T Consensus 82 G~g~~s~~~~~~T~------------------------------------------------------------------ 95 (234)
T 3f7q_A 82 GEGPYSSLVSCRTH------------------------------------------------------------------ 95 (234)
T ss_dssp EECCCCCCEEEECC------------------------------------------------------------------
T ss_pred CcCCCCCeEEEEcC------------------------------------------------------------------
Confidence 98877654433221
Q ss_pred EEEEEEecCCCCCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCCCCC-----eEEccccCcccceEEEcCC
Q psy7040 214 EVEVIVLDKPSPPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEATGR-----WTPAGETEGPVTGLEVEGL 288 (716)
Q Consensus 214 ~~~~~v~~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~~-----~~~~~~~~~~~~~~~i~~L 288 (716)
...|.+|.+ +.+.....+++.|+|++|...+| .+.+|.|++....... |............+.|.+|
T Consensus 96 ------~~~P~~P~~-l~~~~~~~~sv~l~W~~p~~~~g-~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L 167 (234)
T 3f7q_A 96 ------QEVPSEPGR-LAFNVVSSTVTQLSWAEPAETNG-EITAYEVCYGLVNDDNRPIGPMKKVLVDNPKNRMLLIENL 167 (234)
T ss_dssp ------CCCCCCCCC-CEEEECSSSCEEEECCCCSCCSS-CCCEEEEEEEEBCTTSCBSSCCEECCCSCTTCCEEEEECC
T ss_pred ------CCCCCCCCc-cEEEEecCCEEEEEEcCCCCCCC-ceeEEEEEEEECCCCCCccCcceEEEecCCcceEEEeCCC
Confidence 135666777 78888889999999998876555 7999999998754432 3333333345678999999
Q ss_pred CCCCeEEEEEEEEcCCCCCCCCcccceEEecCCCCCCCC-CCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEee
Q psy7040 289 IPNHKYKFRVRAVNKQGKSEPLTTTASIEAKNPFNQPGK-PGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKE 365 (716)
Q Consensus 289 ~p~~~y~~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p~~-p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~ 365 (716)
.|++.|.|+|+|.|..|.+..+... +.+.+....|.. |....+..+.. ..|..+.+|.+++++
T Consensus 168 ~p~t~Y~~~V~A~n~~G~g~~S~~~--~~~~T~~~~P~~~P~~~~~~i~~~------------~~g~~~~~~~~~~~~ 231 (234)
T 3f7q_A 168 RESQPYRYTVKARNGAGWGPEREAI--INLATQPKRPMSIPIIPDIPIVDA------------QSGEDYDSFLMYSDD 231 (234)
T ss_dssp CTTCCEEEEEEEEETTEECCCEEEE--ECGGGSCCCCCCCCCCTTCCEEET------------TC-------------
T ss_pred CCCCeEEEEEEEECCCccCCCcCce--eEeecCCCCCCCCccccceeeEEc------------ccCcchheeeeehhh
Confidence 9999999999999999988776532 333333334432 32222111111 234467888877654
No 55
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.83 E-value=1.9e-19 Score=184.75 Aligned_cols=295 Identities=18% Similarity=0.210 Sum_probs=194.6
Q ss_pred CeEEecCC-----CCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccCCC
Q psy7040 382 PKGKVLDL-----IEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIP 456 (716)
Q Consensus 382 ~~~~i~~l-----~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~ 456 (716)
..+.+.++ ...+...|+|.|.+..+....+... ..... .+|.+. .......+..|+.+.|.|.+.+.|.+
T Consensus 77 ~~l~i~~~~~~~~~~~D~G~Y~C~~~~~~~~~~~s~~~-~l~v~---~p~~~~-~~~~~~~~~~G~~v~l~C~~~~~p~~ 151 (403)
T 3laf_A 77 GSLLIQNILHSRHHKPDEGLYQCEASLGDSGSIISRTA-KVMVA---GPLRFL-SQTESITAFMGDTVLLKCEVIGDPMP 151 (403)
T ss_dssp SCEEECSCCCBTTBCSSCEEEEEEEECGGGCEEECCCE-EEEEC---CCCEEC-SCCCCEEEETTSCEEECCCEECSSCC
T ss_pred CcEEEeeeeccCCCCCcceEEEEEEEeCCCccEEEEEE-EEEec---CCCccc-cCCCcEEEEcCCeEEEEEEEcccCCC
Confidence 45666666 6668899999999754332222221 12221 134332 33556889999999999999999999
Q ss_pred eEEEEeCCeEecc---CCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCcee-eEEEEEEE-----EEEEEE-eCC
Q psy7040 457 TKEWLCNDITIIS---KDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDK-GTAKVTVL-----GCSLKW-NPP 526 (716)
Q Consensus 457 ~~~W~~~~~~~~~---~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~-~s~~~~v~-----~v~l~W-~~p 526 (716)
.+.|++++..+.. ..+.... ....|.|.++...|.|.|+|.|.|..|... ....+.+. ...+.+ ..+
T Consensus 152 ~v~W~~~~~~~~~~~~~~~~~~~---~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~ 228 (403)
T 3laf_A 152 TIHWQKNQQDLNPIPGDSRVVVL---PSGALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQRP 228 (403)
T ss_dssp EEEEEESSSBCCCCTTCCSEEEC---TTSCEEECSCCGGGCEEEEEEEECSSCCCBCCCEEEEEECCCCCCEEEEEEECC
T ss_pred eEEEEECCEeccccCCceEEEEc---CCceEEEcccccccCEEEEEEEEcCCCceeccceeEEEecCCCcccCceEecCC
Confidence 9999999987742 2222222 233799999999999999999999887633 34444444 111111 111
Q ss_pred C----CCCCCceeeEEEEEEecCCCceeeeEEEccceeeeecc---ccceeEEEEcCCCCCCeEEEEEEEEcCCCCCccc
Q psy7040 527 E----DDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDN---VDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVF 599 (716)
Q Consensus 527 ~----~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~---~~~~~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s 599 (716)
. ..+......|.+...+. +.+.|++.+........ ......+.|.++...+.+.|+|.|.|..|....+
T Consensus 229 ~~~~~~~g~~~~l~C~~~~~p~----~~~~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 304 (403)
T 3laf_A 229 SNVIAIEGKDAVLECCVSGYPP----PSFTWLRGEEVIQLRSKKYSLLGGSNLLISNVTDDDSGTYTCVVTYKNENISAS 304 (403)
T ss_dssp CCEEEETTSCEEECCEEEEESC----CEEEEEETTEECCCSSSSEEEETTTEEEECSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CceEecCCCcEEEEEEcCCCCC----CeEEEEECCeeccCCCceEEECCccEEEEeCCCHHHCEEEEEEEEcCCCceEEE
Confidence 1 11223334455544333 34999997764432111 1123579999999999999999999998876666
Q ss_pred eeeeccCCCCC---CccceeeccceeEEEEEEeeEEEEeeeeccCcee----eEEEEeCCeEeeecc---cceeeEEEEc
Q psy7040 600 IEVVVTDKPSA---PEGPIQWLLTLTDVTWEISNYLQELHSSLMPISL----ESQYLMNDKRVTIDN---VDYFTKITIR 669 (716)
Q Consensus 600 ~~~~v~~~p~~---~~~~~~~~~~~v~l~w~i~~y~v~~~~~~~~~~~----~~~W~~~~~~~~~~~---~~~~~~~~i~ 669 (716)
..+.|..+|.. |..+....+..+. |.|.+.| .+.|+++|..+.... ......|.|.
T Consensus 305 ~~l~V~~~p~~~~~~~~~~~~~g~~v~--------------l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~L~i~ 370 (403)
T 3laf_A 305 AELTVLVPPWFLNHPSNLYAYESMDIE--------------FECAVSGKPVPTVNWMKNGDVVIPSDYFQIVGGSNLRIL 370 (403)
T ss_dssp EEEEEEEEEEEEECCCCEECCTTCCEE--------------ECCEEEEESCCEEEEEETTEECCCSSSEEEETTTEEEES
T ss_pred EEEEEECCCcEeecCcceEEecCCeEE--------------EEEEEeeccCCEEEEEECCEECCCCCcEEEecCccEEEe
Confidence 66666544421 1111112233343 6666666 899999999876541 1122679999
Q ss_pred cCCCCCcEEEEEEEEcCCCCceeeEEEEEecCC
Q psy7040 670 PLQRSDTAQYTVTATNSQGKDQVFIEVVVTDKP 702 (716)
Q Consensus 670 ~l~~~~~y~y~~~a~n~~G~~~~s~~l~v~~~p 702 (716)
++...|.|.|+|.|.|..|....++.|.|..||
T Consensus 371 ~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~P~ 403 (403)
T 3laf_A 371 GVVKSDEGFYQCVAENEAGNAQSSAQLIVPKPA 403 (403)
T ss_dssp SCCGGGCEEEEEEEEETTEEEEEEEEEECCCC-
T ss_pred ccccccCEEEEEEEEcCCceEEEEEEEEEeCCC
Confidence 999999999999999999999999999998865
No 56
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=99.83 E-value=2.3e-20 Score=191.19 Aligned_cols=220 Identities=19% Similarity=0.209 Sum_probs=159.5
Q ss_pred ccccCcceEEEEEEEeCCCCcee-EEEEEEecCCCCCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCC--C
Q psy7040 191 MAQRADAGFYTVTAENINGKDSV-EVEVIVLDKPSPPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEA--T 267 (716)
Q Consensus 191 ~l~~~~~g~y~c~a~n~~g~~~~-~~~~~v~~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~--~ 267 (716)
+....+.|.|.|.+.|..+.... .....+..+|.+|.+ +. .....+++.|+|++|...+|.++..|.|+++... .
T Consensus 301 ~S~s~~~Gs~~C~C~ng~~ra~~d~~~~~ct~pPsaP~n-l~-~~vs~tSv~LsW~pP~~~gG~~i~~Y~V~~~~~~~~~ 378 (536)
T 3fl7_A 301 HTLPSPEGATSCECEEGFFRAPQDPASMPCTRPPSAPHY-LT-AVGMGAKVELRWTPPQDSGGREDIVYSVTCEQCWPES 378 (536)
T ss_dssp SEECCCTTCSSCEECTTCBCCTTCCTTSCCBCCCCCBSC-EE-EECCTTSEEEEECCBSCCCSCSCCEEEEEEEEECC-C
T ss_pred CCCCCCCCccEEEEeccccccCCCccccccccCCCcccc-eE-EEecCCEEEEEEeCCcCCCCCceeEEEEEEEeccCCC
Confidence 34467789999999999987433 233445668899987 64 4678899999999998878878999999988632 2
Q ss_pred CCeEEcc--------ccCcccceEEEcCCCCCCeEEEEEEEEcCCCCCCCCcccceEEecCCCCCCCCCCCcEEEeeeCC
Q psy7040 268 GRWTPAG--------ETEGPVTGLEVEGLIPNHKYKFRVRAVNKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDFDTD 339 (716)
Q Consensus 268 ~~~~~~~--------~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~ 339 (716)
..|..+. ........+.|.+|.|++.|.|+|.|.|..|.+.++..+..+...+ .+.+|..+.+...+.+
T Consensus 379 ~~~~~c~~~~~~~~~~~~~~~ts~tI~gL~P~T~Y~frV~A~N~~G~~sps~~s~~v~v~T---~~~~Ps~~~~~~~s~t 455 (536)
T 3fl7_A 379 GECGPCEASVRYSEPPHGLTRTSVTVSDLEPHMNYTFTVEARNGVSGLVTSRSFRTASVSI---NQTEPPKVRLEGRSTT 455 (536)
T ss_dssp CCEEECCTTCEESSCSSSBCSSEEEEECCCTTCEEEEEEEEECTTGGGCSCCCEEEEEEEC---CSCCCCEEEEEECCC-
T ss_pred CcccccCCCceEEEeecCCccceeEeCCCCCCCEEEEEEEEEecCCCCCCCCccceeEEee---cccCCCCCceeeccCC
Confidence 2232221 1224578999999999999999999999988754433333445543 3455666667778889
Q ss_pred eEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceE
Q psy7040 340 FVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHI 418 (716)
Q Consensus 340 ~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~ 418 (716)
++.|+|.+|... ++.|.+|.|+|+..+.. ...........+++|.+|.|++.|.|+|+|.|..|.|++|....+.+
T Consensus 456 SV~LsW~pP~~~-ng~I~~Y~V~y~~~~~~--~~~~~v~~~~ts~~l~gL~P~T~Y~frVrA~n~~G~Gp~S~~v~~~T 531 (536)
T 3fl7_A 456 SLSVSWSIPPPQ-QSRVWKYEVTYRKKGDS--NSYNVRRTEGFSVTLDDLAPDTTYLVQVQALTQEGQGAGSKVHEFQT 531 (536)
T ss_dssp CCEEEEECCTTT-TTTCSEEEEEEEEC--C--CCCEEEEESSSEEECCSCCSSCEEEEEEEEECC---CEECCCEEEEC
T ss_pred eEEEEEECCcCC-CCcccEEEEEEEECCCC--ceEEEEcCCCCEEEECCCCCCCEEEEEEEEEcCCcccCCCCCEEEEe
Confidence 999999998644 45899999999987643 12223356788999999999999999999999999998887654443
No 57
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=99.83 E-value=2.3e-19 Score=167.90 Aligned_cols=183 Identities=17% Similarity=0.275 Sum_probs=143.6
Q ss_pred cCCCCCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCCCCCeEEccccCcccceEEEcCCCCCCeEEEEEEE
Q psy7040 221 DKPSPPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEATGRWTPAGETEGPVTGLEVEGLIPNHKYKFRVRA 300 (716)
Q Consensus 221 ~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a 300 (716)
.++.+|.+ +.+.....+++.|+|++| ++ .+.+|.|+++......+... .......++.|.+|.|++.|.|+|+|
T Consensus 4 ~p~~~P~~-l~~~~~~~~si~l~W~~p---~g-~i~~Y~v~~~~~~~~~~~~~-~~~~~~~~~~i~~L~p~t~Y~~~V~A 77 (234)
T 3f7q_A 4 MDLGAPQN-PNAKAAGSRKIHFNWLPP---SG-KPMGYRVKYWIQGDSESEAH-LLDSKVPSVELTNLYPYCDYEMKVCA 77 (234)
T ss_dssp -CCCCCEE-EEEEECSSSCEEEEEECC---SS-CCCEEEEEEEETTSCGGGCE-EEEESSSEEEECSCCTTCEEEEEEEE
T ss_pred CCCCCCcc-eEEEEcCCCEEEEEEECC---CC-ccceEEEEEEECCCCccceE-EEcCCccEEEECCCCCCCEEEEEEEE
Confidence 46788887 888888999999999987 23 68999999986644322111 11245789999999999999999999
Q ss_pred EcCCCCCCCCcccceEEecCCCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCc-----eEEEe
Q psy7040 301 VNKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPI-----WEKCA 375 (716)
Q Consensus 301 ~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~-----~~~~~ 375 (716)
.|..|.+..+.. +.+.+....|.+|.++.+...+.+++.|+|.+|...+ +.+.+|.|+|+..+... |....
T Consensus 78 ~n~~G~g~~s~~---~~~~T~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~-g~i~~Y~v~~~~~~~~~~~~~~~~~~~ 153 (234)
T 3f7q_A 78 YGAQGEGPYSSL---VSCRTHQEVPSEPGRLAFNVVSSTVTQLSWAEPAETN-GEITAYEVCYGLVNDDNRPIGPMKKVL 153 (234)
T ss_dssp EETTEECCCCCC---EEEECCCCCCCCCCCCEEEECSSSCEEEECCCCSCCS-SCCCEEEEEEEEBCTTSCBSSCCEECC
T ss_pred EeCCCcCCCCCe---EEEEcCCCCCCCCCccEEEEecCCEEEEEEcCCCCCC-CceeEEEEEEEECCCCCCccCcceEEE
Confidence 999998776554 3444555778889999999999999999999986644 48999999998765332 33333
Q ss_pred eecCCCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCC
Q psy7040 376 QTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDP 413 (716)
Q Consensus 376 ~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~ 413 (716)
.......++.|.+|.+++.|.|+|+|.|..|.|.++..
T Consensus 154 ~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~ 191 (234)
T 3f7q_A 154 VDNPKNRMLLIENLRESQPYRYTVKARNGAGWGPEREA 191 (234)
T ss_dssp CSCTTCCEEEEECCCTTCCEEEEEEEEETTEECCCEEE
T ss_pred ecCCcceEEEeCCCCCCCeEEEEEEEECCCccCCCcCc
Confidence 33455679999999999999999999999999988763
No 58
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=99.83 E-value=2.2e-18 Score=169.91 Aligned_cols=227 Identities=15% Similarity=0.152 Sum_probs=170.5
Q ss_pred ccEEEEeccccCcceEEEEEEEeCCCCceeEEEEEEecCCCCCCCCeEEeE-EeCCeEEEEEECCCCCCCCccceEEEEE
Q psy7040 184 NTKLGVRMAQRADAGFYTVTAENINGKDSVEVEVIVLDKPSPPGGPLKVSN-VHAEGVTLDWKVPDDDGGQPIEKYVVDK 262 (716)
Q Consensus 184 ~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~~p~~~~~~~~-~~~~~~~l~W~~p~~~~~~~~~~y~v~~ 262 (716)
...|.|.++...|+|.|+|. ..|.....+.|.|..+|..|. +.... ....++.+.|.++.+ ++ ....|.+.+
T Consensus 59 ~~~L~i~~v~~~d~G~Y~C~---~~g~~~~~~~L~V~~pP~~P~--l~c~~~~~~~~~~c~W~~~~~-~~-~~~~y~l~~ 131 (325)
T 1n26_A 59 GRRLLLRSVQLHDSGNYSCY---RAGRPAGTVHLLVDVPPEEPQ--LSCFRKSPLSNVVCEWGPRST-PS-LTTKAVLLV 131 (325)
T ss_dssp SSEEEECSCCGGGCEEEEEE---SSSSCSCEEEEEECCCCCCCC--CEEEBSSTTSCEEEEECCSSC-CC-TTCEEEEEE
T ss_pred cceEEecccchhhCeEeEEE---eCCEEeeeEEEEeccCCCCCc--eeEEeecCCCcEEEEECCCCC-CC-CCceEEEEE
Confidence 57899999999999999999 378888889999999999887 55542 336689999996553 34 357898887
Q ss_pred EeC-C--CCCe-EEccc-cCcccceEEEcCCC-CCCeEEEEEEEEcCCCCCCCCcccceEEecCCCCCCCCCCCcEEEee
Q psy7040 263 MDE-A--TGRW-TPAGE-TEGPVTGLEVEGLI-PNHKYKFRVRAVNKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDF 336 (716)
Q Consensus 263 ~~~-~--~~~~-~~~~~-~~~~~~~~~i~~L~-p~~~y~~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~ 336 (716)
+.. + ...| ..+.. ......++.+..+. +++.|.|+|.|.|..|.+... .. .........|.+|.++.+...
T Consensus 132 ~~~~~~~~~~~~~~c~~~~~~~~~~c~i~~~~~~~~~Y~f~v~A~N~~G~~~s~-~~--~~~~~~~v~P~pP~~l~v~~~ 208 (325)
T 1n26_A 132 RKFQNSPAEDFQEPCQYSQESQKFSCQLAVPEGDSSFYIVSMCVASSVGSKFSK-TQ--TFQGCGILQPDPPANITVTAV 208 (325)
T ss_dssp EEESSSSCEEEEEEEEEETTTTEEEEEECCCTTCCCEEEEEEEEEETTEEEECC-CE--EEETTTCBCCCCCEEEEEEEC
T ss_pred EEccCCCCCcccccCCCCCCCCCEEEEECCCcccCcEEEEEEEEEcCCCCcccC-cE--EEeeccccCCCCCcceEEEEe
Confidence 653 1 1222 33332 12345788888876 789999999999999976321 11 111122355888999988876
Q ss_pred eC--CeEEEEecCCCCC-CCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCC
Q psy7040 337 DT--DFVELAWTPPEQN-GGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDP 413 (716)
Q Consensus 337 ~~--~~i~l~W~~p~~~-~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~ 413 (716)
.. +++.|+|.+|... .+..+.+|+|+|+..+...|..... .....++.|.+|.+++.|.|+|+|.|..|.|.+|+.
T Consensus 209 ~~~~~sv~lsW~~p~~~~~~~~~~~Y~V~yr~~~~~~W~~~~~-~~~~~~~~l~~L~p~t~Y~~rVrA~n~~g~G~~S~w 287 (325)
T 1n26_A 209 ARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTWMV-KDLQHHCVIHDAWSGLRHVVQLRAQEEFGQGEWSEW 287 (325)
T ss_dssp TTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCCEEEEC-GGGCSEEEESSCCTTCCEEEEEEEEETTTBSCCCCC
T ss_pred cCCCCEEEEEECCCCccCCCcEeEEEEEEEEeCCCCCCEEEcc-cCCceEEEEeCCCCCCeEEEEEEEecCCCCCCCcCC
Confidence 53 5899999997653 3556899999999987778876543 345678999999999999999999999999999988
Q ss_pred CCceEeec
Q psy7040 414 TAPHIARA 421 (716)
Q Consensus 414 ~~~~~~~~ 421 (716)
+..+...+
T Consensus 288 S~~~~~~~ 295 (325)
T 1n26_A 288 SPEAMGTP 295 (325)
T ss_dssp CCCEEECC
T ss_pred CCccceec
Confidence 87766543
No 59
>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens}
Probab=99.83 E-value=1.8e-19 Score=174.95 Aligned_cols=183 Identities=15% Similarity=0.163 Sum_probs=114.6
Q ss_pred CCCCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCCCCCeEEcccc-CcccceEEE--cCCCCCCeEEEEEE
Q psy7040 223 PSPPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEATGRWTPAGET-EGPVTGLEV--EGLIPNHKYKFRVR 299 (716)
Q Consensus 223 p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~-~~~~~~~~i--~~L~p~~~y~~~v~ 299 (716)
..+|.+ +.+... ..++.|+|++|...+ .++. |.|+++..+...|...... ......+.+ ..|.++..|.|+|+
T Consensus 4 l~~P~n-v~~~~~-n~~~iL~W~pp~~~~-~~v~-Y~V~y~~~~~~~W~~~~~c~~~~~~~c~lt~~~l~~~~~Y~~rV~ 79 (306)
T 3s98_A 4 LKSPQK-VEVDII-DDNFILRWNRSDESV-GNVT-FSFDYQKTGMDNWIKLSGCQNITSTKCNFSSLKLNVYEEIKLRIR 79 (306)
T ss_dssp ----CC-CEEEEE-TTEEEEECC---------CE-EEEEEEESSCSSCEECTTCSSBSSSEEECCC---CTTSCEEEEEE
T ss_pred CCCCcE-eEEEEE-CCeEEEEEcCCCCCC-CCeE-EEEEEEECCCCCcEECCCccCCCCCEEEccccccCCCCcEEEEEE
Confidence 456777 787765 667889999876533 3465 9999998877889865322 223445555 45789999999999
Q ss_pred EEcCCCCCCCCcccceEEecCCCCCCCCCCCcEEEeeeCCeEEEEecCCCCCC-----CccceEEEEEEeecCCCc-eEE
Q psy7040 300 AVNKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDFDTDFVELAWTPPEQNG-----GSPIVGYIIEKKEKYSPI-WEK 373 (716)
Q Consensus 300 a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~-----~~~i~~y~v~~~~~~~~~-~~~ 373 (716)
|.| .|.|.++.......... ..+++|. +.+... .++|.|+|.+|...+ .+.+.+|+|.|+..++.. |..
T Consensus 80 A~n-~~~S~~s~~~~f~~~~~--~~~~pP~-v~~~~~-~~si~v~w~P~~~~~~~~~~~g~~l~Y~v~y~~~~~~~~~~~ 154 (306)
T 3s98_A 80 AEK-ENTSSWYEVDSFTPFRK--AQIGPPE-VHLEAE-DKAIVIHISPGTKDSVMWALDGLSFTYSLVIWKNSSGVEERI 154 (306)
T ss_dssp EEC-SSCEEEEECCCBCHHHH--CBCCCCE-EEEEEC-SSCEEEEEECC---CCCC-----CCEEEEEEEETTTCCCEEE
T ss_pred EEe-CCcCCCEeeeeEechhh--CccCCCe-EEEEEc-CCEEEEEEECCCCCCcceeccCCcEEEEEEEEECCCCCeEEE
Confidence 999 77665543322211111 2344554 776644 468999999654321 246889999998776443 332
Q ss_pred EeeecCCCCeEEecCCCCCCeEEEEEEEEe--CCCCCCCCCCCCceE
Q psy7040 374 CAQTEGDTPKGKVLDLIEGNQYEFRVLAVN--KGGPGEPSDPTAPHI 418 (716)
Q Consensus 374 ~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n--~~g~~~~s~~~~~~~ 418 (716)
......+.|.+|.+++.|.|+|+|.+ ..|.|..|......+
T Consensus 155 ----~~~~~~~~l~~L~p~t~Y~~~V~A~~~~~~g~g~~S~~~~~~T 197 (306)
T 3s98_A 155 ----ENIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKT 197 (306)
T ss_dssp ----EEECTEEEECSCCTTCEEEEEEEEEEGGGTEECCCCCCEEEEC
T ss_pred ----ecccceEEEccCCCCCeEEEEEEEEEccCCCCCCCCCcEeeEe
Confidence 23467899999999999999999999 678888877654444
No 60
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Probab=99.83 E-value=7.9e-19 Score=160.67 Aligned_cols=181 Identities=18% Similarity=0.297 Sum_probs=137.3
Q ss_pred CCCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCC-CCcEEEecc---cCCCeEEecCCCCCcEEEEEEEEE
Q psy7040 55 LDPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPE-TGVWIPVGK---TREPEMDVTGLTPGHEYKFRVKAL 130 (716)
Q Consensus 55 ~~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~-~~~~~~~~~---~~~~~~~i~~L~~~~~y~~~v~a~ 130 (716)
+.||..+.+.. +.+++.|+|++|. +++.++.+|.|+|+... .+.|..... ...+.+.+ +|.|++.|.|+|+|.
T Consensus 6 P~~P~~~~~~~-~~~sv~l~W~~p~-~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~~-~L~p~t~Y~~~V~A~ 82 (205)
T 1cfb_A 6 PNAPKLTGITC-QADKAEIHWEQQG-DNRSPILHYTIQFNTSFTPASWDAAYEKVPNTDSSFVV-QMSPWANYTFRVIAF 82 (205)
T ss_dssp CCCCEEEEEEE-CSSEEEEEEECCC-CTTSCCCEEEEEEEESSSTTCCEEEEEEEETTCSEEEE-ECCSSEEEEEEEEEE
T ss_pred CCCCCCcEEEe-cCCEEEEEEECcc-cCCCceEEEEEEEecCCCCCCceeeeeccCCCceEEEE-eCCCCCEEEEEEEEE
Confidence 44566678888 9999999999985 45677999999998664 356643321 23467777 999999999999999
Q ss_pred ecCccCCCcc-ccceEEecCCCCcccccccccceecccCCCCCCceEEEEecCCccEEEEeccccCcceEEEEEEEeCCC
Q psy7040 131 NKEGESEPLE-TFSSIIARDPYSKYTSVSSLDSHKRSNQPCGSGMVRKVQHLDYNTKLGVRMAQRADAGFYTVTAENING 209 (716)
Q Consensus 131 ~~~g~~~~s~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~G~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g 209 (716)
|..|.+.++. .....+...
T Consensus 83 n~~G~~~~s~~~~~~~T~~~------------------------------------------------------------ 102 (205)
T 1cfb_A 83 NKIGASPPSAHSDSCTTQPD------------------------------------------------------------ 102 (205)
T ss_dssp ETTEECCCCCCCCCEEECCC------------------------------------------------------------
T ss_pred ECCccCCCCCCceeEEcCCc------------------------------------------------------------
Confidence 9999988873 333322210
Q ss_pred CceeEEEEEEecCCCCCCCCeEEeEEeCCeEEEEEECCC--CCCCCccceEEEEEEeCCCCC-eEEccccCcccceEEEc
Q psy7040 210 KDSVEVEVIVLDKPSPPGGPLKVSNVHAEGVTLDWKVPD--DDGGQPIEKYVVDKMDEATGR-WTPAGETEGPVTGLEVE 286 (716)
Q Consensus 210 ~~~~~~~~~v~~~p~~p~~~~~~~~~~~~~~~l~W~~p~--~~~~~~~~~y~v~~~~~~~~~-~~~~~~~~~~~~~~~i~ 286 (716)
.++.+|.+ +.+.....+++.|+|++|. ..+| ++.+|.|+++..+... |............+.|.
T Consensus 103 -----------~P~~~P~~-~~~~~~~~~sv~l~W~~p~~~~~ng-~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~ 169 (205)
T 1cfb_A 103 -----------VPFKNPDN-VVGQGTEPNNLVISWTPMPEIEHNA-PNFHYYVSWKRDIPAAAWENNNIFDWRQNNIVIA 169 (205)
T ss_dssp -----------CCSCCCSC-CEEECSSTTCEEEECCCCCGGGTCS-SSCEEEEEEEESSTTCCCEEEEECCTTCCEEEEC
T ss_pred -----------CCCCCCee-eEeecCCCCeEEEEEECCCccccCC-CceEEEEEEEECCCCCCcEEEEecCCCccEEEEc
Confidence 13346666 7888888899999999887 4444 6899999998776543 76655444457899999
Q ss_pred CCCCCCeEEEEEEEEcCCCCCCCCc
Q psy7040 287 GLIPNHKYKFRVRAVNKQGKSEPLT 311 (716)
Q Consensus 287 ~L~p~~~y~~~v~a~n~~g~~~~~~ 311 (716)
+|.+++.|.|+|+|.|..|.+..+.
T Consensus 170 ~L~p~t~Y~~~V~A~n~~G~g~~ss 194 (205)
T 1cfb_A 170 DQPTFVKYLIKVVAINDRGESNVAA 194 (205)
T ss_dssp SCCSSCEEEEEEEEEETTEECSSCC
T ss_pred CCCCCcEEEEEEEEEcCCCcCCCCC
Confidence 9999999999999999999887543
No 61
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.82 E-value=6.4e-17 Score=171.76 Aligned_cols=386 Identities=13% Similarity=0.131 Sum_probs=212.4
Q ss_pred ccceEEEcCCCCCCeEEEEEEEEcCCCCCCCCcccceEEecC-CCCCCC---CCCCcEEEeeeCCeEEEEecCCCCCCCc
Q psy7040 279 PVTGLEVEGLIPNHKYKFRVRAVNKQGKSEPLTTTASIEAKN-PFNQPG---KPGTPEIKDFDTDFVELAWTPPEQNGGS 354 (716)
Q Consensus 279 ~~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~~~~~~~~~~~~-~~~~p~---~p~~~~~~~~~~~~i~l~W~~p~~~~~~ 354 (716)
....+.|.++...+.+.|+|.|.|..|..........+.+.. +..+|. .|... ....+..+.|.|.....
T Consensus 68 ~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~--~~~~g~~v~l~C~~~g~---- 141 (523)
T 2rcj_C 68 TSASLAISGLEAEDESDYYCASWNSSDNSYVFGTGTKVTVLGQPKANPTVTLFPPSS--EELQANKATLVCLISDF---- 141 (523)
T ss_pred CEEEEEECCCChhhCEEEEEEEccCCCccccccCceEEEeccCCCcCCeEEecCCcc--cccCCCceEEEEEeccc----
Confidence 345899999999999999999999766321111111222211 111121 11111 11223456677765221
Q ss_pred cceEEEEEEeecCCCc---eEEEee-ecCCC-----CeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCC
Q psy7040 355 PIVGYIIEKKEKYSPI---WEKCAQ-TEGDT-----PKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVS 425 (716)
Q Consensus 355 ~i~~y~v~~~~~~~~~---~~~~~~-~~~~~-----~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~ 425 (716)
+.....|.|...+..- ...... ...+. ..+.|..+...+...|+|.|.|..|....... .........+
T Consensus 142 ~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~--~~~~~~~~~~ 219 (523)
T 2rcj_C 142 YPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVA--PTECSASTKG 219 (523)
T ss_pred cCCceEEEEecCCCCCCCceEeccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCccccccee--eeecCCCCcC
Confidence 1111223333222100 000000 00111 24788888888899999999998775332211 1111122335
Q ss_pred CcccccccccEEEecCCeEEEEEEEecc-CCC-eEEEEeCCeEeccCCcEEEEeCCC----eEEEEECCCCCCCceeEEE
Q psy7040 426 PYINRDQLSDIKVRAGSNFEFDINVIGE-PIP-TKEWLCNDITIISKDRFKIVNDDK----STKLKVFDSKRGDSGIYTL 499 (716)
Q Consensus 426 P~~~~~~~~~~~~~~g~~~~~~~~v~~~-p~~-~~~W~~~~~~~~~~~~~~~~~~~~----~~~l~i~~l~~~~~~~y~~ 499 (716)
|.+... .....+.+|..+.|.|.+.+. |.+ .+.|++++..+.......+...+. ...|.|.++..+| |.|+|
T Consensus 220 P~v~~~-~~~~~~~~G~~~~l~C~~~g~~P~p~~v~W~k~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-G~Y~C 297 (523)
T 2rcj_C 220 PSVFPL-APSSKSTSGGTAALGCLVKDYFPQPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYIC 297 (523)
T ss_pred CEEEec-CCCcccccCCceEEEEEEeceeCCCeEEEEecCCcccceEeCCcEecCCCcEEEEEEEEechhhcCC-ceEEE
Confidence 554421 122345789999999999887 767 899999987643211111111111 3479999999999 99999
Q ss_pred EEEcCCCceeeEEEEEEE-EEEEEEeCCC-----CCCCCceeeEEEEEEecCCCceeeeEEEccceeeeecc------cc
Q psy7040 500 AVKNSWGTDKGTAKVTVL-GCSLKWNPPE-----DDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDN------VD 567 (716)
Q Consensus 500 ~a~n~~g~~~~s~~~~v~-~v~l~W~~p~-----~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~------~~ 567 (716)
.|.|..|.......+.+. ...+.-.+|. ..+......|.+...+...+.+.+.|++.+........ .+
T Consensus 298 ~a~n~~g~~~~~~~l~v~~~P~~~~~~p~~~~~v~~g~~~~l~C~~~g~~p~~~~~~v~W~k~g~~l~~~~~~~~~~~~~ 377 (523)
T 2rcj_C 298 NVNHKPSNTKVDKRVEPLSLPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPQVKFNWYVDGVQVHNAKTKPREQQYN 377 (523)
T ss_pred EEEeCCCCcceEEecCCCcCceEEecCCCchhhcccCCceEEEEEEecccCCCCceEEEEEECCeEccCCccCCceecCC
Confidence 999999987666555443 1112112221 11223334455543222212345999998765432210 00
Q ss_pred ----ceeEEEEcCCCCCCeEEEEEEEEcCCCCCccceeeec-cCCCCCCcccee-------eccceeEEEEEEeeEEEEe
Q psy7040 568 ----YFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVV-TDKPSAPEGPIQ-------WLLTLTDVTWEISNYLQEL 635 (716)
Q Consensus 568 ----~~~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~~~~v-~~~p~~~~~~~~-------~~~~~v~l~w~i~~y~v~~ 635 (716)
....+.|......+.+.|+|.|.|..|.......+.+ ......|. +.. +....+.
T Consensus 378 g~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~P~-v~~~~~~~~~~~~~~~~------------ 444 (523)
T 2rcj_C 378 STYRVVSVLTVLHQNWLDGKEYKCKVSNKALPAPIEKTISKAKGQPREPQ-VYTLPPSREEMTKNQVS------------ 444 (523)
T ss_pred CcEEEEEEEEECHHHhcCCCeEEEEEeCCCCCCceeEEEEcccCCCCCCE-EEEeCCChHHccCCceE------------
Confidence 1134777778888999999999998776654444432 11122222 221 1222344
Q ss_pred eeeccCcee------eEEEEeCCeEeeecc--------cce---eeEEEEccCCCCCcEEEEEEEEcCCCC
Q psy7040 636 HSSLMPISL------ESQYLMNDKRVTIDN--------VDY---FTKITIRPLQRSDTAQYTVTATNSQGK 689 (716)
Q Consensus 636 ~~~~~~~~~------~~~W~~~~~~~~~~~--------~~~---~~~~~i~~l~~~~~y~y~~~a~n~~G~ 689 (716)
|.|.+.| .+.|+++|.++.... .+. ...+.|......|.|.|+|.|.|....
T Consensus 445 --l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~~~~l~v~~~~~~~~g~Y~C~a~n~~l~ 513 (523)
T 2rcj_C 445 --LTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALH 513 (523)
T ss_pred --EEEEEEeeECCCCEEEEEECCEECCCeeeccceeCCCCCEEEEEEEEEChHHccCCCeEEEEEEcCCcC
Confidence 4455444 689999999886430 111 133555555557899999999997654
No 62
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=99.82 E-value=2.3e-19 Score=165.82 Aligned_cols=200 Identities=17% Similarity=0.170 Sum_probs=150.9
Q ss_pred ecCCCCCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCCCCCeEEccccCcccceEEEcCC-CCCCeEEEEE
Q psy7040 220 LDKPSPPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEATGRWTPAGETEGPVTGLEVEGL-IPNHKYKFRV 298 (716)
Q Consensus 220 ~~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L-~p~~~y~~~v 298 (716)
..+|.+|.+ +.+.....+++.|+|++|...++ ..+|.|+++..... +..+.........+.|.+| .+++.|.|+|
T Consensus 5 g~pP~~P~~-l~~~~~~~~sv~l~W~~p~~~~~--~~~Y~v~~~~~~~~-~~~~~~~~~~~~~~~i~~L~~~~t~Y~~~V 80 (215)
T 1bqu_A 5 GLPPEKPKN-LSCIVNEGKKMRCEWDGGRETHL--ETNFTLKSEWATHK-FADCKAKRDTPTSCTVDYSTVYFVNIEVWV 80 (215)
T ss_dssp CCCCCCCEE-EEEEEETTSCCEEEEECCSCCSS--CCEEEEEEEETTEE-CCCEECCSSCTTEEECSSCCCTTSCEEEEE
T ss_pred CCCCCCCEe-eEeEECCCCcEEEEcCCCCCCCC--CceEEEEEEEcCCC-ccccccccCCcceEEEcCCccccccEEEEE
Confidence 457888887 78888788899999998876543 47999998765432 2222223345689999999 9999999999
Q ss_pred EEEcCCCCCCCCcccceEEecCCCCCCCCCCCcEEEee--eCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEee
Q psy7040 299 RAVNKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDF--DTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQ 376 (716)
Q Consensus 299 ~a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~--~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~ 376 (716)
.|.|..|.+..... .........|.+|.++.+... +.+++.|+|.+|...+ +.+.+|.|+|+..+...|.....
T Consensus 81 ~A~n~~G~~~s~~~---~~~~~~~~~p~pP~~~~~~~~~~~~~sv~l~W~~p~~~~-~~i~~Y~v~y~~~~~~~~~~~~~ 156 (215)
T 1bqu_A 81 EAENALGKVTSDHI---NFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKS-VIILKYNIQYRTKDASTWSQIPP 156 (215)
T ss_dssp EEEETTEEEECCCE---EECGGGSEECCCCEEEEEECC--CCSCEEEEEECCGGGG-TSCEEEEEEEEETTCSSCEECCG
T ss_pred EEEecccCccCCcE---EecccccCcCCCCCceEEEEecCCCceEEEEEeCCCCCC-cceEEEEEEEccCCCCCceEecc
Confidence 99999997652211 111112245778888888765 6789999999987654 47899999999887677876543
Q ss_pred e--cCCCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCc
Q psy7040 377 T--EGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPY 427 (716)
Q Consensus 377 ~--~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~ 427 (716)
. .....++.|.+|.+++.|.|+|+|.|..|.|.+|+.+..+...+...+|.
T Consensus 157 ~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~g~~S~~S~~~~~~T~~~~P~ 209 (215)
T 1bqu_A 157 EDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRPS 209 (215)
T ss_dssp GGGCSCCSEEEECSCCSSEEEEEEEEEEETTSCSCCCCCCCCEEEEECCCHHH
T ss_pred ccccCccceEEeCCCCCCCEEEEEEEEccCCCCCccCCCCCcccccccccCCc
Confidence 2 45678999999999999999999999999998888877666555444443
No 63
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.81 E-value=5.1e-19 Score=179.54 Aligned_cols=293 Identities=16% Similarity=0.118 Sum_probs=188.0
Q ss_pred eEEecCC-CCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEe-ccCCCeEEE
Q psy7040 383 KGKVLDL-IEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVI-GEPIPTKEW 460 (716)
Q Consensus 383 ~~~i~~l-~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~-~~p~~~~~W 460 (716)
.+.|.+. ...+.+.|+|.|.|..|..........+.. .|.+.......+.+..|+.+.|.|... +.|.+.+.|
T Consensus 63 ~l~i~~~~~~~D~G~Y~C~A~N~~G~~~s~~~~l~v~~-----~~~~~~~~~~~~~v~~G~~~~l~C~~~~~~~~~~~~W 137 (384)
T 3kld_A 63 SLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAY-----LENFKTRTRSTVSVRRGQGMVLLCGPPPHSGELSYAW 137 (384)
T ss_dssp EEEEESCCHHHHCEEEEEEEEETTEEEECCCEEEEEEE-----ECCCSCCCCCCEEEEETCCEEECCCCCSEESCEEEEE
T ss_pred EEEEcCCCCcccCEEEEEEEEcCcccEEecceEEEEec-----ccccccCCCCceeEEcCCCeEEecCCCCCCCCeEEEE
Confidence 3455544 556789999999999885322211111111 112222223457889999999999763 456678999
Q ss_pred EeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeE---EEEEEE--------EEEEEEeCCC--
Q psy7040 461 LCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGT---AKVTVL--------GCSLKWNPPE-- 527 (716)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s---~~~~v~--------~v~l~W~~p~-- 527 (716)
++++..+....+..+.. ....|.|.++...|.|.|+|.|.|..|..... ..+.+. ...+.-..|.
T Consensus 138 ~~~~~~~~~~~~~~~~~--~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~~~~~~p~~~~~~~~~~ 215 (384)
T 3kld_A 138 IFNEYPSYQDNRRFVSQ--ETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETV 215 (384)
T ss_dssp EETTEECCCSSSEEECT--TTCCEEESSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEEEEEECCCEEEEEEEECCSEE
T ss_pred EECCCCCEeeccEEEEc--CCCcEEEeecCHHHCceEEEEEecccccceeeCCceEEEEccCCcccccCCceeecCCCce
Confidence 99998775544443322 23469999999999999999999988764321 111111 1112222221
Q ss_pred --CCCCCceeeEEEEEEecCCCceeeeEEEccce-eee-eccccceeEEEEcCCCCCCeEEEEEEEEcCCCCCccceeee
Q psy7040 528 --DDGGAPIEYYMVEKMETDTGKVLIKWIRTNDK-RVT-IDNVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVV 603 (716)
Q Consensus 528 --~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~-~~~-~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~~~~ 603 (716)
..+......|.+...+ .|.+.|++.+.. ... .........+.|.++...+.+.|+|.|.|..|.......+.
T Consensus 216 ~~~~G~~v~l~C~~~g~P----~p~i~W~k~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~ 291 (384)
T 3kld_A 216 PAEKGTTVKLECFALGNP----VPTILWRRADGKPIARKARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLT 291 (384)
T ss_dssp EEETTSCEEEEEEEEEES----CCEEEEEETTCCCCCTTCEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred EecCCCcEEEEEEEeecC----CCcEEEEeCCCccccccceecCCCcEEEECCCChhhCEEEEEEEEcCCCeEEEEEEEE
Confidence 1223334455554443 344999985432 211 01112236799999999999999999999999776666666
Q ss_pred ccCCCCC---CccceeeccceeEEEEEEeeEEEEeeeeccCcee----eEEEEeCCeEeeecc--cceeeEEEEccCCCC
Q psy7040 604 VTDKPSA---PEGPIQWLLTLTDVTWEISNYLQELHSSLMPISL----ESQYLMNDKRVTIDN--VDYFTKITIRPLQRS 674 (716)
Q Consensus 604 v~~~p~~---~~~~~~~~~~~v~l~w~i~~y~v~~~~~~~~~~~----~~~W~~~~~~~~~~~--~~~~~~~~i~~l~~~ 674 (716)
|..+|.. +.......+..+. |.|.+.| .+.|+++|..+.... ......|.|.++...
T Consensus 292 v~~~P~~~~~~~~~~v~~g~~v~--------------l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~L~i~~v~~~ 357 (384)
T 3kld_A 292 FYAQPNWVQIINDIHVAMEESVF--------------WECKANGRPKPTYRWLKNGDPLLTRDRIQIEQGTLNITIVNLS 357 (384)
T ss_dssp EEEEEEEEECCCCEEECTTCCEE--------------EECEEEEESCCEEEEEETTEECCCBTTEEEETTEEEESSCCGG
T ss_pred EecCCccccCCCceEecCCCCEE--------------EEeECCccCCCeEEEEECCEECCCCccEEEeCCEEEEeecChh
Confidence 6544431 1101111233333 6677776 899999999886541 112358999999999
Q ss_pred CcEEEEEEEEcCCCCceeeEEEEEec
Q psy7040 675 DTAQYTVTATNSQGKDQVFIEVVVTD 700 (716)
Q Consensus 675 ~~y~y~~~a~n~~G~~~~s~~l~v~~ 700 (716)
|+|.|+|.|.|.+|....++.|.|..
T Consensus 358 D~G~Y~C~A~N~~G~~~~~a~L~V~~ 383 (384)
T 3kld_A 358 DAGMYQCVAENKHGVIFSSAELSVIA 383 (384)
T ss_dssp GCEEEEEEEEETTEEEEEEEEEEEC-
T ss_pred hCEEEEEEEEeCCceEEeceEEEEec
Confidence 99999999999999999999999864
No 64
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=99.81 E-value=1.1e-18 Score=160.58 Aligned_cols=184 Identities=18% Similarity=0.258 Sum_probs=134.9
Q ss_pred CCCCCCceEEEEeCCeEEEEecCCCCC---CCCccceEEEEEEcCCCCcEE-EecccCCCeEEecCCCCCcEEEEEEEEE
Q psy7040 55 LDPEGPLEVSNIHKDGCTLKWNKPKDD---GGEPLEGYLVEKYDPETGVWI-PVGKTREPEMDVTGLTPGHEYKFRVKAL 130 (716)
Q Consensus 55 ~~p~~~l~~~~~~~~s~~l~W~~p~~~---~~~~i~~y~v~~~~~~~~~~~-~~~~~~~~~~~i~~L~~~~~y~~~v~a~ 130 (716)
..||.++.+...+.+++.|+|++|... .+.++.+|+|+|+..+...+. .......+++.|.+|.|++.|.|+|+|.
T Consensus 5 ~~~P~~l~~~~~~~~si~l~W~~p~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~ 84 (211)
T 3p4l_A 5 MMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANATTLSYLVTGLKPNTLYEFSVMVT 84 (211)
T ss_dssp CCCCEEEEEEECSSSCEEEEEECTTSCTTCCCCSSCEEEEEEEECC---CCCEEEEESSSEEEECSCCTTCEEEEEEEEE
T ss_pred CCCCCCEEEEecCCCeEEEEEeCCCCCcccccCCCcEEEEEEEECCCCcceEEEeCCCceEEEecCcCCCCEEEEEEEEE
Confidence 345556778888999999999987532 135699999999876654332 1223345799999999999999999999
Q ss_pred ecCccCCCccccceEEecCCCCcccccccccceecccCCCCCCceEEEEecCCccEEEEeccccCcceEEEEEEEeCCCC
Q psy7040 131 NKEGESEPLETFSSIIARDPYSKYTSVSSLDSHKRSNQPCGSGMVRKVQHLDYNTKLGVRMAQRADAGFYTVTAENINGK 210 (716)
Q Consensus 131 ~~~g~~~~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~G~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~ 210 (716)
|..|.+.++......+..
T Consensus 85 n~~g~~~~S~~~~~~t~~-------------------------------------------------------------- 102 (211)
T 3p4l_A 85 KGRRSSTWSMTAHGTTFE-------------------------------------------------------------- 102 (211)
T ss_dssp ETTEECCCCCCEEEECCC--------------------------------------------------------------
T ss_pred cCCCCCccceeEeeeccc--------------------------------------------------------------
Confidence 999988776554333221
Q ss_pred ceeEEEEEEecCCC-CCCCCeEEeEE--eCCeEEEEEECCCCCCCCccceEEEEEEeCCCC---CeEEccccCcccceEE
Q psy7040 211 DSVEVEVIVLDKPS-PPGGPLKVSNV--HAEGVTLDWKVPDDDGGQPIEKYVVDKMDEATG---RWTPAGETEGPVTGLE 284 (716)
Q Consensus 211 ~~~~~~~~v~~~p~-~p~~~~~~~~~--~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~---~~~~~~~~~~~~~~~~ 284 (716)
..|. +|.+ +.+... ..+++.|+|++|...+| ++.+|.|++...... .|... ........+.
T Consensus 103 ----------~~P~~~P~~-~~~~~~~~s~~sv~l~W~~p~~~~g-~i~~Y~v~~~~~~~~~~~~~~~~-~~~~~~~~~~ 169 (211)
T 3p4l_A 103 ----------LVPTSPPKD-VTVVSKEGKPKTIIVNWQPPSEANG-KITGYIIYYSTDVNAEIHDWVIE-PVVGNRLTHQ 169 (211)
T ss_dssp ----------CCCCSCCEE-EEEEEETTEEEEEEEEEECCTTCCS-CCCEEEEEEESCTTSCGGGSEEE-EEESSCSEEE
T ss_pred ----------CCCCCCCcc-eEEEecCCCCCEEEEEECCCCCCCC-CEEEEEEEEEECCCCCCCceEEE-EecCCeeEEE
Confidence 1333 5655 666666 46799999998876555 799999999876543 22222 1224578999
Q ss_pred EcCCCCCCeEEEEEEEEcCCCCCCCCccc
Q psy7040 285 VEGLIPNHKYKFRVRAVNKQGKSEPLTTT 313 (716)
Q Consensus 285 i~~L~p~~~y~~~v~a~n~~g~~~~~~~~ 313 (716)
|.+|.|++.|.|+|+|.|..|.+.++...
T Consensus 170 i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v 198 (211)
T 3p4l_A 170 IQELTLDTPYYFKIQARNSKGMGPMSEAV 198 (211)
T ss_dssp ECCCCTTCEEEEEEEEEETTEECCCCCCE
T ss_pred EcCCCCCCEEEEEEEEEcCCccCCCCCCE
Confidence 99999999999999999999998877765
No 65
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.80 E-value=1.7e-20 Score=210.03 Aligned_cols=477 Identities=13% Similarity=0.052 Sum_probs=71.9
Q ss_pred CCeEEecCCCCCcEEEEEEEEEecCccCCCccccceEEe---------cCCC--CcccccccccceecccCCC-------
Q psy7040 109 EPEMDVTGLTPGHEYKFRVKALNKEGESEPLETFSSIIA---------RDPY--SKYTSVSSLDSHKRSNQPC------- 170 (716)
Q Consensus 109 ~~~~~i~~L~~~~~y~~~v~a~~~~g~~~~s~~~~~~~~---------~~p~--~~~~~~~~~~~~~~~~~p~------- 170 (716)
...+.|.++++.+.+.|+|++.+..+ ...+........ .++. .+.......+.|.+...+.
T Consensus 182 ~~~l~i~~~~~~d~G~Y~C~~~~~~~-~~~s~~~~~~v~~~~~~~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~W 260 (772)
T 3v2a_R 182 KKGFTIPSYMISYAGMVFCEAKINDE-SYQSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNW 260 (772)
T ss_dssp TTEEEEEGGGTTTCSEEEEEEEETTE-EEECCEEEEEEECCCEEEEEEECCSCEEEETTCCEEEEEEEEECTTCCCEEEE
T ss_pred CCCeEecCCChhhCeEEEEEEEECCc-eEEEEEEEEEEecCccceeeeCCCCceEEecCCcEEEEEEEecCCCCceeEEE
Confidence 36799999999999999999997644 222221111111 1111 1112223345577765321
Q ss_pred ---CCC----ceEEE--------EecCCccEEEEeccccCcceEEEEEEEeCCCCceeEEEEEEecCCCCCCCC---eEE
Q psy7040 171 ---GSG----MVRKV--------QHLDYNTKLGVRMAQRADAGFYTVTAENINGKDSVEVEVIVLDKPSPPGGP---LKV 232 (716)
Q Consensus 171 ---G~~----~~~~~--------~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~~p~~~---~~~ 232 (716)
|.. ..... ........|.|.++...|+|.|+|.|.|..|..+..+.|.|..+|.....+ ...
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~ 340 (772)
T 3v2a_R 261 EYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEKPFVAFGSGMESLV 340 (772)
T ss_dssp ECC--------CEEEEC-----CCCEEEEEEEEESSCCSTTCSEEEEEEECSSCEEEEEEEEEEECCCC-----------
T ss_pred ecCCccCCCceeeeccccccccccceEEEEEEEECcCCcCCCeEEEEEEEcCCcceeEEEEEEEeCCCeeEeccCCCCcE
Confidence 211 01100 112245689999999999999999999999988888999998877543221 123
Q ss_pred eEEeCCeEEEEEECCCCCCCCccceEEEEEEeCCCCCeEEccccCcccceEEEcCCCCCCeEEEEEEEEcCCCCCCCCcc
Q psy7040 233 SNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEATGRWTPAGETEGPVTGLEVEGLIPNHKYKFRVRAVNKQGKSEPLTT 312 (716)
Q Consensus 233 ~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~~~~ 312 (716)
....++.+.|.|..... +...+.+.. .+.. ...... ......+.|.++...+.+.|+|.|.|..|....+..
T Consensus 341 ~v~~G~~v~l~C~~~~~----p~~~v~W~~--~g~~-l~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~s~~ 412 (772)
T 3v2a_R 341 EATVGERVRIPAKYLGY----PPPEIKWYK--NGIP-LESNHT-IKAGHVLTIMEVSERDTGNYTVILTNPISKEKQSHV 412 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEcCCCcEEEEEEEeee----CCCeEEEEE--CCEe-CCCCce-EccceeEEEecCChhcCceEEEEEEECCcCeEEEEE
Confidence 34567788999986321 222222221 1110 000000 012478899999999999999999998876533322
Q ss_pred cceEEecCCCCCCCCCCC-cE---EEeeeCCeEEEEecCCCCCCCccceEEEEEE--------------eecCCCceEEE
Q psy7040 313 TASIEAKNPFNQPGKPGT-PE---IKDFDTDFVELAWTPPEQNGGSPIVGYIIEK--------------KEKYSPIWEKC 374 (716)
Q Consensus 313 ~~~~~~~~~~~~p~~p~~-~~---~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~--------------~~~~~~~~~~~ 374 (716)
.. +.+. .+|..... +. .....+..+.|.|.....+....+..|+-.- .......|...
T Consensus 413 ~~-l~v~---~~P~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 488 (772)
T 3v2a_R 413 VS-LVVY---VPPQIGEKSLISPVDSYQYGTTQTLTCTVYAIPPPHHIHWYWQLEEECANEPSQAVSVTNPYPCEEWRSV 488 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EE-EEEe---cCCcccccccCCCccccCCCCcEEEEeEeccCCCCcEEEEEEcCCccccccccccccccCcCcccccccc
Confidence 21 1111 11111000 00 0012234455555542111000012111000 00000001000
Q ss_pred -------------------eeecCCCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCccccccccc
Q psy7040 375 -------------------AQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSD 435 (716)
Q Consensus 375 -------------------~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~ 435 (716)
.........+.+.++ .+.+.|+|.|.|..|....+....+. .+|.+... ..
T Consensus 489 ~~~~~g~~i~~~~~~~~~~~~~~~~~~~L~i~~~--~d~G~Y~C~a~N~~g~~~~~~~l~V~------~~p~i~~~--p~ 558 (772)
T 3v2a_R 489 EDFQGGNKIEVNKNQFALIEGKNKTVSTLVIQAA--NVSALYKCEAVNKVGRGERVISFHVT------RGPEITLQ--PD 558 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccCCCcEEEeccceeeccCcceEEEEEEEeec--ccCeEEEEEEEccccccceeEEEEEE------CCceeecc--CC
Confidence 000011134455554 45788999999998865443222111 13333211 12
Q ss_pred EEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEE--------------------EeCCCeEEEEECCCCCCCce
Q psy7040 436 IKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKI--------------------VNDDKSTKLKVFDSKRGDSG 495 (716)
Q Consensus 436 ~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~--------------------~~~~~~~~l~i~~l~~~~~~ 495 (716)
..+.+|+.+.|.|.+.+.|.+.+.|++++..+........ ........|.|.++...|.|
T Consensus 559 ~~~~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 638 (772)
T 3v2a_R 559 MQPTEQESVSLWCTADRSTFENLTWYKLGPQPLPIHVGELPTPVCKNLDTLWKLNATMFSNSTNDILIMELKNASLQDQG 638 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccCCceEEEEeccCCCCCCcEEEEcCCcccccccCcccccccccccceeeccceeeecCCCceEEEEECCCCccCCc
Confidence 4477899999999999999999999998866543222111 11112345999999999999
Q ss_pred eEEEEEEcCCCceee--EEEEEEE---EEEEEEeCC---CCCCCCceeeEEEEEEecCCCceeeeEEEccceeeeec---
Q psy7040 496 IYTLAVKNSWGTDKG--TAKVTVL---GCSLKWNPP---EDDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTID--- 564 (716)
Q Consensus 496 ~y~~~a~n~~g~~~~--s~~~~v~---~v~l~W~~p---~~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~--- 564 (716)
.|+|.|.|..|.... ...+.+. ...+.-.+. ...+......|.+...+ .+.+.|++.+.......
T Consensus 639 ~Y~C~a~n~~~~~~~s~~~~l~v~~~~~P~~~~~~~~~~v~~g~~~~l~C~~~g~P----~p~v~W~k~g~~l~~~~~~~ 714 (772)
T 3v2a_R 639 DYVCLAQDRKTKKRHCVVRQLTVLERVAPTITGNLENQTTSIGESIEVSCTASGNP----PPQIMWFKDNETLVEDSGIV 714 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEEEeCCCCeEEEEEEeecccccCCCEeecCCCceEEeCCCCEEEEEEeCccC----CCeEEEEECCeECcCCCCeE
Confidence 999999996654432 2333332 111110000 01122223344443333 34499999876554321
Q ss_pred cccceeEEEEcCCCCCCeEEEEEEEEcCCCCCccceeeeccCCCCCCc
Q psy7040 565 NVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTDKPSAPE 612 (716)
Q Consensus 565 ~~~~~~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~~~~v~~~p~~~~ 612 (716)
.......+.|.++...+.+.|+|.|.|..|....+..+.|..+|....
T Consensus 715 ~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~p~~~~ 762 (772)
T 3v2a_R 715 LKDGNRNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFIIEGAQEKTN 762 (772)
T ss_dssp ------------------------------------------------
T ss_pred EcCCCcEEEECcCCHHHCEEEEEEEEeCCcceeEEEEEEEECCCCccc
Confidence 112247899999999999999999999999988888888888887554
No 66
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=99.80 E-value=5.9e-18 Score=165.35 Aligned_cols=244 Identities=14% Similarity=0.064 Sum_probs=166.6
Q ss_pred ccEEEecCCeEEEEEEEecc-------CCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCC
Q psy7040 434 SDIKVRAGSNFEFDINVIGE-------PIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWG 506 (716)
Q Consensus 434 ~~~~~~~g~~~~~~~~v~~~-------p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g 506 (716)
.+..+..|..+.|.|.+.+. |.+.+.|.+++..+... ++.+.. +....|.|.++... .|.|+|.|.|..+
T Consensus 12 ~~~~v~~G~~v~l~C~~~~~~~~~~~~p~p~i~W~~~g~~i~~~-~~~~~~-~~~~~L~i~~~~~~-~g~Y~C~a~~~g~ 88 (303)
T 1i1r_A 12 ESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKE-QYTIIN-RTASSVTFTDIASL-NIQLTCNILTFGQ 88 (303)
T ss_dssp SSCEEETTCCEEEEEEECHHHHHHHTCCGGGEEEEETTEECCGG-GCEEEE-TTEEEEEECSCCCS-EEEEEEEEEETTT
T ss_pred CCceEeCCCCEEEEEEECCccccccCCChhheEEEECCEECChh-heeeeC-CcEEEEEEcCcCCC-ceEEEEecccCCC
Confidence 34678999999999999864 78899999999988544 444433 34568999999987 5999999988422
Q ss_pred cee--eEEEEEEE-----------------EEEEEEeCCCCCCCCceeeEEEEEEecCCCceeeeEEEccceeeeecccc
Q psy7040 507 TDK--GTAKVTVL-----------------GCSLKWNPPEDDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDNVD 567 (716)
Q Consensus 507 ~~~--~s~~~~v~-----------------~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 567 (716)
... ....+.+. ++.|+|.++.+.+ . +.+|.|+++.... ..|.... ...
T Consensus 89 ~~~~~~~~~l~v~~~P~~P~~l~~~~~~~~~v~l~W~~~~~~~-~-~~~Y~v~~~~~~~----~~~~~~~-------~~~ 155 (303)
T 1i1r_A 89 LEQNVYGITIISGLPPEKPKNLSCIVNEGKKMRCEWDGGRETH-L-ETNFTLKSEWATH----KFADCKA-------KRD 155 (303)
T ss_dssp EEEEEEEEEEEEECCCCCCEEEEEEEETTSCCEEEEECCSCCS-S-CCEEEEEEEETTE----ECCCEEC-------CSS
T ss_pred cceEEEEEEEeccCCCCCCeeeEEEECCCCcEEEEccCCCCCC-C-CcCEEEEEEecCC----CCccCCC-------cCC
Confidence 221 12222222 7899999987653 3 5799999876542 2121110 011
Q ss_pred ceeEEEEcCC-CCCCeEEEEEEEEcCCCCCccceee-e-----ccCCCCCCccceee--ccceeEEEEE--------Eee
Q psy7040 568 YFTKITIRPL-QRSDTAQYTVTATNSQGKDQVFIEV-V-----VTDKPSAPEGPIQW--LLTLTDVTWE--------ISN 630 (716)
Q Consensus 568 ~~~~~~i~~L-~~~~~y~~~v~a~n~~G~~~~s~~~-~-----v~~~p~~~~~~~~~--~~~~v~l~w~--------i~~ 630 (716)
....+.|.+| .+++.|.|+|.|.|..|.+..+... . .+.+|..+. +..+ +.+++.|+|. +.+
T Consensus 156 ~~~~~~i~~L~~p~t~Y~f~V~A~N~~G~~~s~~~~~~~~~~~~p~pP~~~~-v~~~~~~~~sv~l~W~~p~~~~~~i~~ 234 (303)
T 1i1r_A 156 TPTSCTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPVYKVKPNPPHNLS-VINSEELSSILKLTWTNPSIKSVIILK 234 (303)
T ss_dssp CTTEEECSSCCCTTSCEEEEEEEEETTEEEECCCEEECGGGGEECCCCEEEE-EECCSSSSSCEEEEEECCGGGGTSCEE
T ss_pred CceEEEECCcCcccccEEEEEEEEcCCCCcccCCEEECHHHeEecCCCcceE-EEEecCCCCEEEEEECCCCCCCcccEE
Confidence 1378999999 9999999999999999987543222 1 134444333 3323 5689999999 789
Q ss_pred EEEEeeeeccCceeeEEEEeCCeEeeecccceeeEEEEccCCCCCcEEEEEEEEcCCCCcee---eEEEEEecCC
Q psy7040 631 YLQELHSSLMPISLESQYLMNDKRVTIDNVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQV---FIEVVVTDKP 702 (716)
Q Consensus 631 y~v~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~y~~~a~n~~G~~~~---s~~l~v~~~p 702 (716)
|.|+|+... .-.|..-... ........+.|.+|.+++.|.++|+|.|..|.+.+ |..+.+.++.
T Consensus 235 Y~v~y~~~~-----~~~w~~~~~~---~~~~~~~~~~l~~L~p~t~Y~~rV~A~n~~G~G~~S~wS~~~~~~T~e 301 (303)
T 1i1r_A 235 YNIQYRTKD-----ASTWSQIPPE---DTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYE 301 (303)
T ss_dssp EEEEEEETT-----CSSCEECCGG---GGCSCCSEEEECSCCTTCEEEEEEEEEETTSCSCCCCCCCCEEEECCC
T ss_pred EEEEEEeCC-----CCCceEEccc---cCCCceeEEEeCCCCCCCEEEEEEEeccCCCCCCcCCCCCccceeCCc
Confidence 999887642 1234321110 00123368999999999999999999999998754 4556666644
No 67
>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D*
Probab=99.79 E-value=1.5e-18 Score=173.67 Aligned_cols=304 Identities=13% Similarity=0.090 Sum_probs=156.8
Q ss_pred CcceEEEEEEEeCCCCceeEEEEEEecCCCCCCCCeEEeEEe-CCeEEEEEECCCC-C-CCCccceEEEEEEeCCCCCeE
Q psy7040 195 ADAGFYTVTAENINGKDSVEVEVIVLDKPSPPGGPLKVSNVH-AEGVTLDWKVPDD-D-GGQPIEKYVVDKMDEATGRWT 271 (716)
Q Consensus 195 ~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~~p~~~~~~~~~~-~~~~~l~W~~p~~-~-~~~~~~~y~v~~~~~~~~~~~ 271 (716)
-..|.+++.+.|..|....... . ..|.||.+ +.+.... .+++.|+|++|.. + .+..+..|.++++..+...|.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~-~--v~~~pP~n-l~v~~~~~~~~v~LsW~p~~~~~~~~~~~~~Y~v~~~~~~~~~w~ 82 (380)
T 3lb6_C 7 AVGCLYTFLISTTFGCTSSSDT-E--IKVNPPQD-FEIVDPGYLGYLYLQWQPPLSLDHFKECTVEYELKYRNIGSETWK 82 (380)
T ss_dssp ---------------------------CCCCCEE-EEEECCSSSSEEEEEEECCCC------CCCEEEEEEEETTCSSCE
T ss_pred ehhhhhhheeecccccccCCcc-c--ccCCcCCc-eEEEecCcCceEEEEECCCCCccccccceEEEEEEECCCCCCcce
Confidence 3457778888888876422211 1 14788887 7887666 5889999998765 2 223578999999988777898
Q ss_pred EccccCcccceEEEcCCCCCCeEEEEEEEEcC----CCCCCCCcccceEEecCCC-CCCCCCCCcEEEeeeCCeEEEEec
Q psy7040 272 PAGETEGPVTGLEVEGLIPNHKYKFRVRAVNK----QGKSEPLTTTASIEAKNPF-NQPGKPGTPEIKDFDTDFVELAWT 346 (716)
Q Consensus 272 ~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~n~----~g~~~~~~~~~~~~~~~~~-~~p~~p~~~~~~~~~~~~i~l~W~ 346 (716)
...... .....++..+..|.|+|+|.|. .|.+.++..+..+....+. .+|.+|.++.+.......+.++|+
T Consensus 83 ~~~~~~----~~~~~~~~l~~~y~~rV~a~~~~~~~~g~g~~S~~s~~~~~~~~eg~P~~~P~nl~C~~~~~~~l~csW~ 158 (380)
T 3lb6_C 83 TIITKN----LHYKDGFDLNKGIEAXIHTLLPWQCTNGSEVQSSWAETTYWISPQGIPETXVQDMDCVYYNWQYLLCSWK 158 (380)
T ss_dssp EEEESS----SEEEEECCTTSCEEEEEEEECCHHHHSSSCCBCCCEEEEECCCCCSCTTSSCEEEEEEEETTTEEEEEEE
T ss_pred EEEecc----EEEEEeecCCCceEEEEEeecCCcccCCccCccccchhhcccCCCCCCCCCCcEeEEEECCCcEEEEEEc
Confidence 776541 2233456669999999999975 6777767666555544443 446689999999999999999999
Q ss_pred CCCCCCCccceEEEEEEeecCCCceEEEee---ecCCCCeEEec--CCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeec
Q psy7040 347 PPEQNGGSPIVGYIIEKKEKYSPIWEKCAQ---TEGDTPKGKVL--DLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARA 421 (716)
Q Consensus 347 ~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~---~~~~~~~~~i~--~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~ 421 (716)
++... +...+|.++|+..+...+..+.. ..+....+.+. ++...+.|.|+|.|.|..|.+..+.. .+....
T Consensus 159 p~~~~--~~~~~Y~l~y~~~~~~~~~~C~~~~~~~g~~~~C~~~~~~~~~~~~Y~i~V~a~n~~G~~~s~~~--~~~~~~ 234 (380)
T 3lb6_C 159 PGIGV--LLDTNYNLFYWYEGLDHALQCVDYIKADGQNIGCRFPYLEASDYKDFYICVNGSSENKPIRSSYF--TFQLQN 234 (380)
T ss_dssp CC--------CCEEEEEECTTCSSCEECSEEEEC--CEEEEECCCCTTCSSSCEEEEEEEC-----CCCEEE--EECGGG
T ss_pred CCCCC--CCCccEEEEEEECCCCccccCCCccccCCceEEEEeCCCcccceeEEEEEEEEEcCCeeeccccE--EEcHHH
Confidence 85432 24678999998765444444321 11222245555 56778899999999998776543211 011100
Q ss_pred --CCCCCcccccccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEE
Q psy7040 422 --KKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTL 499 (716)
Q Consensus 422 --~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~ 499 (716)
.+.||. . +.+......
T Consensus 235 ~v~p~pP~-----------------~--------------------------------------l~v~~~~~~------- 252 (380)
T 3lb6_C 235 IVKPLPPV-----------------Y--------------------------------------LTFTRESSC------- 252 (380)
T ss_dssp SCCCCCCE-----------------E--------------------------------------EEEC------------
T ss_pred cccCCCCc-----------------e--------------------------------------EEEEEcCCC-------
Confidence 112221 0 111110000
Q ss_pred EEEcCCCceeeEEEEEEEEEEEEEeCCCCCCCCceeeEEEEEEecCCCceeeeEEEccceeeeeccccceeEEEEcC-CC
Q psy7040 500 AVKNSWGTDKGTAKVTVLGCSLKWNPPEDDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDNVDYFTKITIRP-LQ 578 (716)
Q Consensus 500 ~a~n~~g~~~~s~~~~v~~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~i~~-L~ 578 (716)
++.|+|++|...++..+.+|+|+|+... ..|..... . ..+.+.+ |+
T Consensus 253 ------------------~l~l~W~~P~~~~~~~~l~Yev~y~~~~-----~~w~~~~~--~--------~~~~l~~~L~ 299 (380)
T 3lb6_C 253 ------------------EIKLKWSIPLGPIPARCFDYEIEIREDD-----TTLVTATV--E--------NETYTLKTTN 299 (380)
T ss_dssp --------------------CEEEECCSSSCCSTTEEEEECC-------------CCEE--S--------SSCC------
T ss_pred ------------------eEEEEECCCCCCCCcceEEEEEEEEeCC-----CCceEecc--c--------ceEEEeCccC
Confidence 7889999987655556899999998853 34543211 1 3467888 99
Q ss_pred CCCeEEEEEEEEcC-----CC-CCccceeeecc
Q psy7040 579 RSDTAQYTVTATNS-----QG-KDQVFIEVVVT 605 (716)
Q Consensus 579 ~~~~y~~~v~a~n~-----~G-~~~~s~~~~v~ 605 (716)
+++.|.|+|+|... .| .|++|..+.+.
T Consensus 300 p~t~Y~~qVRa~~~~~~~~~g~WSeWS~~~~~~ 332 (380)
T 3lb6_C 300 ETRQLCFVVRSKVNIYCSDDGIWSEWSDKQCWE 332 (380)
T ss_dssp ------CCEEEEECTTTCSSCCCCCCCCC----
T ss_pred CCcEEEEEEEEEEcccCCCCCCCCCCCCCEEEe
Confidence 99999999999943 22 25556655543
No 68
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.79 E-value=3.5e-18 Score=167.53 Aligned_cols=258 Identities=18% Similarity=0.202 Sum_probs=162.8
Q ss_pred CCcccccccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEE-e-CCCeEEEEECCCCC-CCceeEEEEE
Q psy7040 425 SPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIV-N-DDKSTKLKVFDSKR-GDSGIYTLAV 501 (716)
Q Consensus 425 ~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~-~-~~~~~~l~i~~l~~-~~~~~y~~~a 501 (716)
+|.+.. .+.++.+.+|+.+.|.|.+.+.|.+.+.|++++..+... ++.+. . .+....|.|.++.. .|.|.|+|.|
T Consensus 6 ~P~~~~-~p~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~g~~i~~~-~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~a 83 (304)
T 2yd9_A 6 PPRFIK-EPKDQIGVSGGVASFVCQATGDPKPRVTWNKKGKKVNSQ-RFETIEFDESAGAVLRIQPLRTPRDENVYECVA 83 (304)
T ss_dssp CCEEEE-CCCCEEEETTSCEEEEEEEECSSCCEEEEC-------CT-TEEEEEETTTTEEEEEECSCCTTTTCSEEEEEE
T ss_pred CCeeee-cCCceEecCCCeEEEEEEEEEeCCCeEEEEECCEECCCC-ceEEEEecCCCceEEEEecccccCCCeEEEEEE
Confidence 555542 355788999999999999999999999999999887544 33333 2 33457899999997 9999999999
Q ss_pred EcCCCceeeEEEEEEEE--------EEEEEeCCC---CCCCCceeeEEEEEEecCCCceeeeEEEccceeeeecc-----
Q psy7040 502 KNSWGTDKGTAKVTVLG--------CSLKWNPPE---DDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDN----- 565 (716)
Q Consensus 502 ~n~~g~~~~s~~~~v~~--------v~l~W~~p~---~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~----- 565 (716)
.|..|.......+.+.. ..+.-.+.. ..+......|.+. +.+.+.+.|++.+........
T Consensus 84 ~n~~g~~~~~~~l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~~----g~p~~~v~W~k~~~~~~~~~~~~~~~ 159 (304)
T 2yd9_A 84 QNSVGEITVHAKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAAS----GNPDPEITWFKDFLPVDPSASNGRIK 159 (304)
T ss_dssp ECSSCEECCEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEECCEEE----CSSCCEEEEEETTEECCGGGGTTSEE
T ss_pred ECCCCeEEEEEEEEEeccccCCCCCCeeecCCccEEEeCCCeEEEEEECc----cCCCCeEEEEECCEECcCCCCcceEE
Confidence 99999877777777761 222211110 1122222333332 334456999998765432110
Q ss_pred ccceeEEEEcCCCCCCeEEEEEEEEcCCCCCccc-eeeecc---CCCCC---CccceeeccceeEEEEEEeeEEEEeeee
Q psy7040 566 VDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVF-IEVVVT---DKPSA---PEGPIQWLLTLTDVTWEISNYLQELHSS 638 (716)
Q Consensus 566 ~~~~~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s-~~~~v~---~~p~~---~~~~~~~~~~~v~l~w~i~~y~v~~~~~ 638 (716)
......+.|.++...+.+.|+|.|.|..|..... ..+.|. .+|.. |.......+..+. |
T Consensus 160 ~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~~~~P~~~~~~~~~~v~~G~~v~--------------l 225 (304)
T 2yd9_A 160 QLRSGALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQNVAPRFSILPMSHEIMPGGNVN--------------I 225 (304)
T ss_dssp ECTTSCEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECCCEEEEEEECCCCBCCCTTCCEE--------------E
T ss_pred eCCCeEEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEeeccCCcEEecCCceEEcCCCeEE--------------E
Confidence 1123579999999999999999999998865433 233332 22211 1101112234444 5
Q ss_pred ccCcee----eEEEEeCCeEeeecc--cceeeEEEEccCCCCCcEEEEEEEEcCCCCceeeEEEEEecCCCC
Q psy7040 639 LMPISL----ESQYLMNDKRVTIDN--VDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTDKPSA 704 (716)
Q Consensus 639 ~~~~~~----~~~W~~~~~~~~~~~--~~~~~~~~i~~l~~~~~y~y~~~a~n~~G~~~~s~~l~v~~~p~~ 704 (716)
.|.+.| .+.|+++|..+.... ......|.|.++ .|+|.|+|.|.|..|....++.|.|..++..
T Consensus 226 ~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~L~i~~~--~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~ 295 (304)
T 2yd9_A 226 TCVAVGSPMPYVKWMQGAEDLTPEDDMPVGRNVLELTDV--KDSANYTCVAMSSLGVIEAVAQITVKSLPKA 295 (304)
T ss_dssp EEEEEEESCCEEEEEETTEECSCSSSCCBSEEEEEECSC--CSCEEEEEEEEETTEEEEEEEEEC-------
T ss_pred EEEEeeeCCCEEEEEECCEECCCcccccCCcEEEEEccc--ccCEEEEEEEEeCCCcEEEEEEEEEecCccc
Confidence 555555 899999999887652 223356777776 5899999999999999999999999886653
No 69
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=99.79 E-value=4.9e-18 Score=154.67 Aligned_cols=176 Identities=18% Similarity=0.305 Sum_probs=134.9
Q ss_pred cCCCCCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCCCCCeEEccccCcccceEEEcCCCCCCeEEEEEEE
Q psy7040 221 DKPSPPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEATGRWTPAGETEGPVTGLEVEGLIPNHKYKFRVRA 300 (716)
Q Consensus 221 ~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a 300 (716)
..| +|.+ +.+.....+++.|+|++|.. ..+.+|.|++...+...+............+.|.+|.|++.|.|+|.|
T Consensus 22 ~~P-~P~~-l~~~~~~~~sv~lsW~~p~~---~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a 96 (203)
T 2gee_A 22 EVP-QPTD-LSFVDITDSSIGLRWTPLNS---STIIGYRITVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVYT 96 (203)
T ss_dssp CCC-CCEE-EEEECCTTTCEEEEEECCSS---SSCCEEEEEEEESSSSSCCEEEEEETTCCEEEECSCCTTCEEEEEEEE
T ss_pred cCc-CCCc-cEEEecCCCEEEEEecCCCC---CCccEEEEEEEECCCCCCceeEEcCCCccEEEeCCCCCCCEEEEEEEE
Confidence 345 5665 78888889999999998752 368999999987765543333333355789999999999999999999
Q ss_pred EcCCCCCCCCcccceEEecCCCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCC
Q psy7040 301 VNKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGD 380 (716)
Q Consensus 301 ~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~ 380 (716)
.|..|.+.+... ... ..+| +|.++.+...+.+++.|+|.+|.. +.+.+|.|+|+................
T Consensus 97 ~~~~g~s~~~~~---~t~---~~~p-~P~~l~~~~~~~~sv~l~W~~p~~---~~i~~Y~v~~~~~~~~~~~~~~~~~~~ 166 (203)
T 2gee_A 97 VKNGGESTPTTL---TQQ---TAVP-PPTDLRFTNIGPDTMRVTWAPPPS---IDLTNFLVRYSPVKNEEDVAELSISPS 166 (203)
T ss_dssp ESSSCBCCCEEE---EEE---CCCC-CCEEEEEEEEETTEEEEEEECCSS---CCCSEEEEEEEETTCGGGCEEEEECTT
T ss_pred EeCCCccccEee---eec---CCCc-CCCceEEEEcCCCEEEEEEcCCCC---CCccEEEEEEEECCCCCccEEEEcCCC
Confidence 998887654432 221 1334 788999999999999999999742 378999999998553332233344677
Q ss_pred CCeEEecCCCCCCeEEEEEEEEeCCCCCCCC
Q psy7040 381 TPKGKVLDLIEGNQYEFRVLAVNKGGPGEPS 411 (716)
Q Consensus 381 ~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s 411 (716)
..++.|.+|.|++.|.|+|+|.|..|.|.+.
T Consensus 167 ~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p~ 197 (203)
T 2gee_A 167 DNAVVLTNLLPGTEYVVSVSSVYEQHESTPL 197 (203)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEETTEECCCE
T ss_pred cCEEEECCCCCCCEEEEEEEEecCCCcCCCe
Confidence 8999999999999999999999999887653
No 70
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.79 E-value=1.7e-18 Score=176.69 Aligned_cols=290 Identities=10% Similarity=-0.008 Sum_probs=161.3
Q ss_pred eEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccCCCeEEEEe
Q psy7040 383 KGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLC 462 (716)
Q Consensus 383 ~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~ 462 (716)
++.|.++...+.+.|.|.|.|..|.... .....+. .+|.+.. .....+..+....|.|.+.|.|.|.+.|++
T Consensus 104 sL~I~~v~~~D~G~Y~C~a~N~~g~~~~---~~~l~V~---~~p~~~~--~~p~~~~~~~~~~L~C~a~G~P~P~i~W~k 175 (423)
T 3qs7_E 104 SMVILKMTETQAGEYLLFIQSEATNYTI---LFTVSIR---NTLLYTL--RRPYFRKMENQDALVCISESVPEPIVEWVL 175 (423)
T ss_dssp EEEESSCCSSSCSEEEEEEEC--CEEEE---EEEEEEC--------CE--EEEEEEECSSSSCEEEEEEESSCCEEEEEE
T ss_pred EEEEeecCcccCEEEEEEEEcCCCcEEE---EEEEEEe---cCccccc--cCCcEeccCCceEEEEEEeeecCCeEEEEE
Confidence 5789999999999999999998774321 1111111 1333211 112234557777899999999999999999
Q ss_pred CCeEeccCCc---EEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeE-EEEEEEEEEEEEeCC---CCCCCCcee
Q psy7040 463 NDITIISKDR---FKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGT-AKVTVLGCSLKWNPP---EDDGGAPIE 535 (716)
Q Consensus 463 ~~~~~~~~~~---~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s-~~~~v~~v~l~W~~p---~~~~~~~i~ 535 (716)
++........ ..+... . .-+...+.|.|+|.|.|..|..... ..+.+.. ...+.++ ...+.....
T Consensus 176 ~~~~~~~~~~~~~~~~~~~--~-----~~l~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~-~p~~~~~~~~v~~G~~v~L 247 (423)
T 3qs7_E 176 CDSQGESCKEESPAVVKKE--E-----KVLHELFGTDIRCCARNELGRECTRLFTIDLNQ-TPQTTLPQLFLKVGEPLWI 247 (423)
T ss_dssp C-------------CEEEC--C-----SEECCCCSSCEEEEEECSSCEEEEECEEEESSS-CCCSSTTEEEEETTSCEEE
T ss_pred CCCCCcccccccccccccc--c-----eEEecccCeEEEEEEEcCCCCcceeeEEEEEec-CCccCCCceEEeCCCeEEE
Confidence 8765421100 001110 0 1125778999999999999976442 2333220 0000000 011222233
Q ss_pred eEEEEEEecCCCceeeeEEEccceeeeec------c-----ccceeEEEEcCCCCCCeEEEEEEEEcCCCCCccceeeec
Q psy7040 536 YYMVEKMETDTGKVLIKWIRTNDKRVTID------N-----VDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVV 604 (716)
Q Consensus 536 ~y~v~~~~~~~~~~~~~w~~~~~~~~~~~------~-----~~~~~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~~~~v 604 (716)
.|.+... .+.+.+.|++.+....... . ......+.|.++...+.+.|+|.|.|. ...+..+.|
T Consensus 248 ~C~~~g~---~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~---~~~~~~L~V 321 (423)
T 3qs7_E 248 RCKAVHV---NHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTI 321 (423)
T ss_dssp EEEEEES---SSCCCEEEEESSSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCTTTCEEEEEEETTE---EEEEEEEEE
T ss_pred EEEEEcC---CCCcEEEEEECCEEccccceeecccccCCceeEEEEEEEEeecCHHHCEEEEEEEecC---CCceEEEEE
Confidence 4444321 2334499999876542110 0 111246999999999999999999997 333344445
Q ss_pred cCCCCC---C--ccceeeccceeEEEEEEeeEEEEeeeeccCcee----eEEEEeCCeEeeecccc--eeeEEEEccCCC
Q psy7040 605 TDKPSA---P--EGPIQWLLTLTDVTWEISNYLQELHSSLMPISL----ESQYLMNDKRVTIDNVD--YFTKITIRPLQR 673 (716)
Q Consensus 605 ~~~p~~---~--~~~~~~~~~~v~l~w~i~~y~v~~~~~~~~~~~----~~~W~~~~~~~~~~~~~--~~~~~~i~~l~~ 673 (716)
..+|.. + ..+....+..+. |.|.+.| .+.|+++|..+...... ....+.+..+..
T Consensus 322 ~~~p~i~~~~~~~~~~v~~G~~v~--------------l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~ 387 (423)
T 3qs7_E 322 VEKGFINATNSSEDYEIDQYEEFC--------------FSVRFKAYPQIRCTWTFSRKSFPCEQKGLDNGYSISKFCNHK 387 (423)
T ss_dssp ESSCEEEEC---CEECCCTTCCCC--------------EEEEEEEESCCEEEEEETTEEEECBCCBCSSSSEEEEECCCT
T ss_pred EeCCcceEcCCCccEEecCCCeEE--------------EEEEEEEcCCCeEEEEECCEECCCccccccCCcEEEEEeccc
Confidence 544421 1 001111233444 5566655 89999999998765211 112232367788
Q ss_pred CCcEEEEEEEEcCCCCceeeEEEEEecCCCCCCCC
Q psy7040 674 SDTAQYTVTATNSQGKDQVFIEVVVTDKPSAPEGP 708 (716)
Q Consensus 674 ~~~y~y~~~a~n~~G~~~~s~~l~v~~~p~~p~~p 708 (716)
.|+|.|+|.|.|..|....++.|.|...|++|.++
T Consensus 388 ~D~G~YtC~A~N~~G~~~~s~~L~v~~~p~~~~~~ 422 (423)
T 3qs7_E 388 HQPGEYIFHAENDDAQFTKMFTLNIRSGTKHHHHH 422 (423)
T ss_dssp TCCSCEEEEEEETTEEEEEEEEEC-----------
T ss_pred ccCEEEEEEEEcCCceEEEEEEEEEecCCcccccC
Confidence 99999999999999999999999999999999765
No 71
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.79 E-value=2.9e-18 Score=179.82 Aligned_cols=377 Identities=11% Similarity=0.024 Sum_probs=203.0
Q ss_pred cEEEEeccccCcceEEEEEEEeCCCCceeEEEEEEecCCC-CCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEE
Q psy7040 185 TKLGVRMAQRADAGFYTVTAENINGKDSVEVEVIVLDKPS-PPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKM 263 (716)
Q Consensus 185 ~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~-~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~ 263 (716)
.+|.|.+++..|+|.|+|.|.|..|.......+.+...+. .+..| .....+..+.|.|.+. |.|.-.+.+...
T Consensus 103 ~SL~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~v~v~~~~~~~~~~p--~~~~~~~~~~L~C~a~----G~P~P~i~W~~~ 176 (527)
T 3qs9_E 103 VSMVILKMTETQAGEYLLFIQSEATNYTILFTVSIRNTLLYTLRRP--YFRKMENQDALVCISE----SVPEPIVEWVLC 176 (527)
T ss_dssp EEEEESSCCSSSCSEEEEEEEC--CEEEEEEEEEEC-----CEEEE--EEEECSSSSCEEEEEE----ESSCCEEEEEEC
T ss_pred EEEEECcCChhhCeeEEEEEEeccccEEEEEEEEECCceeeccCCC--cEEecCCceEEEEEEc----eecCCeEEEEEC
Confidence 4699999999999999999999988877777766652111 11111 1122345567788752 223333333221
Q ss_pred eCCCCCeEEccccCcccceEEEcCCCCCCeEEEEEEEEcCCCCCCCCcccceEEecCCCCCCCCCCCcEEEeeeCCeEEE
Q psy7040 264 DEATGRWTPAGETEGPVTGLEVEGLIPNHKYKFRVRAVNKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDFDTDFVEL 343 (716)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l 343 (716)
........ .............+.+.+.+.|+|.|.|..|..... ...+.+.. .+..+|. .+....+..+.|
T Consensus 177 ~~~~~~~~---~~~~~~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~~~--~~~l~V~~--~p~~~p~--~~~v~~G~~v~L 247 (527)
T 3qs9_E 177 DSQGESCK---EESPAVVKKEEKVLHELFGTDIRCCARNELGRECTR--LFTIDLNQ--TPQTTLP--QLFLKVGEPLWI 247 (527)
T ss_dssp ----------------CEEECCSEECCCCSSCEEEEEECSSCEEEEE--CEEEESSS--CCCCSCC--EEEECTTSCEEE
T ss_pred CCCCcccc---ccCCcEEEEeeeeccccCCEEEEEEEEeCCCcccce--EEEEEEec--cCccCCC--ceEEeCCCeEEE
Confidence 11110000 000011112223356788899999999988865331 11222221 1111333 233334556666
Q ss_pred EecCC-CCCCCccceEEEEEEeecCCC----ceEEEeee-----cCCCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCC
Q psy7040 344 AWTPP-EQNGGSPIVGYIIEKKEKYSP----IWEKCAQT-----EGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDP 413 (716)
Q Consensus 344 ~W~~p-~~~~~~~i~~y~v~~~~~~~~----~~~~~~~~-----~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~ 413 (716)
.|... .. +. ..|.|...+.. ........ ......+.|.++...+.+.|+|.|.|. . + .
T Consensus 248 ~C~~~~g~----p~--p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~--~---~-~ 315 (527)
T 3qs9_E 248 RCKAVHVN----HG--FGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH--P---S-Q 315 (527)
T ss_dssp EEEEEESS----SC--CCEEEECSSSCCCGGGEEEEEEEETTTEEEEEEEEEESSCCGGGCEEEEEEETTE--E---E-E
T ss_pred EEEEccCC----CC--eEEEEEECCEECCCCceeeeeeeccCcceeeEEEEEEccCCcccCeEEEEEEEeC--C---C-c
Confidence 66652 11 11 11222222210 01000000 011235889999999999999999886 1 1 1
Q ss_pred CCceEeecCCCCCccccc-ccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCC
Q psy7040 414 TAPHIARAKKVSPYINRD-QLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRG 492 (716)
Q Consensus 414 ~~~~~~~~~~~~P~~~~~-~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~ 492 (716)
.....+ ..+|.+... ....+.+..|..+.|.|.+.+.|.+.+.|++++..+.....+. .....|.|.++...
T Consensus 316 ~~~L~V---~~~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~----~~~~~L~I~~v~~~ 388 (527)
T 3qs9_E 316 SALVTI---VEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGL----DNGYSISKFCNHKH 388 (527)
T ss_dssp EEEEEE---C--CEEECCCSCCEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCBC----SSSSEEEEECCCTT
T ss_pred eEEEEE---EccCccccccCcccEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCcccc----cCCcEEEEecCCcc
Confidence 111111 123333211 1234667889999999999999999999999999886554422 13457999999999
Q ss_pred CceeEEEEEEcCCCceeeEEEEEEE---EEEEEEeCCCCCCCCceeeEEEEEEecCCCceeeeEEEccceeee-------
Q psy7040 493 DSGIYTLAVKNSWGTDKGTAKVTVL---GCSLKWNPPEDDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVT------- 562 (716)
Q Consensus 493 ~~~~y~~~a~n~~g~~~~s~~~~v~---~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~------- 562 (716)
|.|.|+|.|.|..|....++.+.|. .+... + .+. ...|.+. +.+.|.+.|++.+.....
T Consensus 389 D~G~YtC~A~N~~g~~~~~~~L~V~~~P~i~~~---~---~~~-~l~C~a~----g~P~p~i~W~~~~~~~~~~~~~~~~ 457 (527)
T 3qs9_E 389 QPGEYIFHAENDDAQFTKMFTLNIRRKPQVLAE---A---SAS-QASCFSD----GYPLPSWTWKKCSDKSPNCTEEITE 457 (527)
T ss_dssp CCSCEEEEEEETTEEEEEEEEEC--CCCEEEEC---C---CCE----EEEE----CSSCCEEEEECCC-----CCCCCCC
T ss_pred cCEEEEEEEEeCCCcEEEEEEEEEecCCeEEEe---C---CCC-EEEEEEE----EEcCCeEEEEECCCCcCCCcccccc
Confidence 9999999999999988887777776 22211 1 122 2244443 344556999865432210
Q ss_pred ---------eccccceeEEEEcCCCCCCeEEEEEEEEcCCCCCccceeeeccC
Q psy7040 563 ---------IDNVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTD 606 (716)
Q Consensus 563 ---------~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~~~~v~~ 606 (716)
...........+.-....+.+.|+|.|.|..|.......+.|+.
T Consensus 458 ~~~~~~~~~~~~~~~~~~s~L~i~~~~d~G~Y~C~A~N~~G~~~~~~~L~V~~ 510 (527)
T 3qs9_E 458 GVWNRKANRKVFGQWVSSSTLNMSEAIKGFLVKCCAYNSLGTSCETILLNSPG 510 (527)
T ss_dssp CEEEC---------CEEEEECCCCCSSCSCEEEEEEECSSCEEEEEEEC----
T ss_pred ccceeccccccCCceEEEEEEEEEEcCCCEEEEEEEEeCCCCceeEEEEecCC
Confidence 00000112223333334589999999999999887776665544
No 72
>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C*
Probab=99.79 E-value=1.9e-17 Score=162.39 Aligned_cols=285 Identities=13% Similarity=0.097 Sum_probs=167.1
Q ss_pred CCCCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCCCCCeEEccccCcccceEEEcCCCCCCeEEEEEEEEc
Q psy7040 223 PSPPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEATGRWTPAGETEGPVTGLEVEGLIPNHKYKFRVRAVN 302 (716)
Q Consensus 223 p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~n 302 (716)
..+|.+ +.+......++.|+|++|..........|.+.+... |.... ....+.+.+|.++..|.|+|+|..
T Consensus 4 ~~pP~n-l~~~~~~~~~v~l~W~pP~~~~~~~~~~Y~v~~~~~----~~~~~----~~~~~~~~~~~~~~~y~~~V~a~~ 74 (314)
T 3bpo_C 4 QPPVTN-LSVSVENLCTVIWTWNPPEGASSNCSLWYFSHFGDK----QDKKI----APETRRSIEVPLNERICLQVGSQC 74 (314)
T ss_dssp CCCCEE-EEEEEETTTEEEEEEECCSSCCCSSCCCEEECCC------CCCEE----ESSSEEEEECCCSSCEEEEEEECC
T ss_pred CCCCcc-eEEEeCCceEEEEEEcCCCCCCCCceEEEEEEeccc----CceEe----ccccEEEEEEcCCCcEEEEEEEEe
Confidence 356776 888887888999999997765233467888876432 21111 124456778999999999999965
Q ss_pred -CCCCCCCCcccceEEecCCCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEee--ecC
Q psy7040 303 -KQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQ--TEG 379 (716)
Q Consensus 303 -~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~--~~~ 379 (716)
..|.+.++.............+|.+|.++.+.......+.++|.++... + .+.+|.|+|+..+...+..+.. ...
T Consensus 75 ~~~~~g~~s~~~~~~~~~~~~~pp~~P~~l~c~~~~~~~~~c~W~~~~~~-~-~~~~Y~l~y~~~~~~~~~~C~~~~~~~ 152 (314)
T 3bpo_C 75 STNESEKPSILVEKCISPPEGDPESAVTELQCIWHNLSYMKCSWLPGRNT-S-PDTNYTLYYWHRSLEKIHQCENIFREG 152 (314)
T ss_dssp ---------CCEEEEECCCCC-CCSSCEEEEEEEETTTEEEEEEECCC-----CCCCEEEEEEESSCSSCEECCCEEEET
T ss_pred cCCCCCCCCcCeeeeeecCCCCCCCCCEeceEEECCCCeEEEEECCCCCC-C-CCccEEEEEEeCCCCccccCcCeecCC
Confidence 4444444444321221222345668999999988889999999997643 2 4789999987655444544432 223
Q ss_pred CCCeEEecCCC----CCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccCC
Q psy7040 380 DTPKGKVLDLI----EGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPI 455 (716)
Q Consensus 380 ~~~~~~i~~l~----~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~ 455 (716)
....+.+..+. ..+.|.|+|.|.|..|.+..+...........+.+|. .+.+
T Consensus 153 ~~~~c~~~~~~~~~~~~~~y~~~V~a~n~~G~~~~~~~~~~~~~~v~P~pP~-----------------~l~~------- 208 (314)
T 3bpo_C 153 QYFGCSFDLTKVKDSSFEQHSVQIMVKDNAGKIKPSFNIVPLTSRVKPDPPH-----------------IKNL------- 208 (314)
T ss_dssp TEEEEEEECCC--------CCEEEEEEETTSCSCCEEEEECSSSSEECCCCE-----------------EEEE-------
T ss_pred CeEEEEECCCCccccceeEEEEEEEEEcCCCceecccEEEehhheEeeCCCC-----------------EEEE-------
Confidence 34567777665 3678999999999988764331100000000111111 1111
Q ss_pred CeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEEEEEEEEEEEEEeCCCCCCCCcee
Q psy7040 456 PTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVLGCSLKWNPPEDDGGAPIE 535 (716)
Q Consensus 456 ~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v~~v~l~W~~p~~~~~~~i~ 535 (716)
.+ ... ++.|+|++|...++. +.
T Consensus 209 -----------------------------~~---~~~-------------------------~l~lsW~~P~~~~~~-~l 230 (314)
T 3bpo_C 209 -----------------------------SF---HND-------------------------DLYVQWENPQNFISR-CL 230 (314)
T ss_dssp -----------------------------EE---ETT-------------------------EEEEEEECCTTCCGG-GE
T ss_pred -----------------------------EE---cCC-------------------------cEEEEEeCCCccCCc-eE
Confidence 00 001 899999998753333 68
Q ss_pred eEEEEEEecCCCceeeeEEEccce------eeeeccccceeEEEEcCCCCCCeEEEEEEEEcC------CC-CCccceee
Q psy7040 536 YYMVEKMETDTGKVLIKWIRTNDK------RVTIDNVDYFTKITIRPLQRSDTAQYTVTATNS------QG-KDQVFIEV 602 (716)
Q Consensus 536 ~y~v~~~~~~~~~~~~~w~~~~~~------~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~------~G-~~~~s~~~ 602 (716)
.|+|+|+.... ..|...... ............+.|.+|++++.|.|+|+|.+. .| .|.+|..+
T Consensus 231 ~Yev~y~~~~~----~~w~~~~~~~~~c~~~~~~~~~~~~~~~~l~~L~p~t~Y~~qVra~~~~~~~~~~g~WS~WS~~~ 306 (314)
T 3bpo_C 231 FYEVEVNNSQT----ETHNVFYVQEAKCENPEFERNVENTSCFMVPGVLPDTLNTVRIRVKTNKLCYEDDKLWSNWSQEM 306 (314)
T ss_dssp EEEEEEEC--C----CCEEEEEESCCCCCCTTSSCCCSSEEEEEEESCCTTSCEEEEEEEEECTTTSCCCCCCCCCCCCE
T ss_pred EEEEEEEECCC----CcceEEecccccccccccccccCCceEEEEccCCCCCEEEEEEEeeecccccCCCCeeCCCCCCe
Confidence 99999998776 556431100 000000112488999999999999999999985 34 36666655
Q ss_pred ec
Q psy7040 603 VV 604 (716)
Q Consensus 603 ~v 604 (716)
.+
T Consensus 307 ~~ 308 (314)
T 3bpo_C 307 SI 308 (314)
T ss_dssp EE
T ss_pred Ee
Confidence 44
No 73
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.79 E-value=5e-18 Score=172.60 Aligned_cols=293 Identities=14% Similarity=0.141 Sum_probs=191.5
Q ss_pred CeEEecCCCC-CCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEE-eccCCCeEE
Q psy7040 382 PKGKVLDLIE-GNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINV-IGEPIPTKE 459 (716)
Q Consensus 382 ~~~~i~~l~~-~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v-~~~p~~~~~ 459 (716)
..+.|.++.. .+.+.|+|.|.|..|..........+.. +|.+.......+.+.+|+.+.|.|.+ .+.|.+.+.
T Consensus 61 ~~L~i~~~~~~~D~G~Y~C~a~n~~g~~~s~~~~l~v~~-----~~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~i~ 135 (382)
T 1cs6_A 61 GDLVISNPVKAKDAGSYQCVATNARGTVVSREASLRFGF-----LQEFSAEERDPVKITEGWGVMFTCSPPPHYPALSYR 135 (382)
T ss_dssp TEEEEESCCHHHHCEEEEEEEEETTEEEECCCEEEEEEE-----ECCCCSSCCCCEEEETTSCEEECCCCCSEESCCEEE
T ss_pred CeEEEecccccccCEEEEEEEEcCCcEEEecceEEEeec-----cccccccCCCceEEecCCcEEEEeCCCCCCCCcEEE
Confidence 4678888775 7889999999998775322111111111 22222233456789999999999986 567889999
Q ss_pred EEeCCeEec--cCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeE-----EEEEEE-------EEEEEEeC
Q psy7040 460 WLCNDITII--SKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGT-----AKVTVL-------GCSLKWNP 525 (716)
Q Consensus 460 W~~~~~~~~--~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s-----~~~~v~-------~v~l~W~~ 525 (716)
|++++..+. ...+..+ ......|.|.++...|.|.|+|.|.|..|..... ..+.+. ...+....
T Consensus 136 W~~~~~~~~~~~~~~~~~--~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~~~~~~~P~~~~~~ 213 (382)
T 1cs6_A 136 WLLNEFPNFIPADGRRFV--SQTTGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKAKF 213 (382)
T ss_dssp EEESSTTCBCCCCSSEEE--CTTTCCEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCCCEEEEEEECC
T ss_pred EEECCCccccccCceEEE--ecCceEEEEEeeCcccCeeEEEEEEEccccccceeEccceeeccchhhcccCCCceeccC
Confidence 999986643 2233322 2234579999999999999999999988643322 222221 12222221
Q ss_pred CC----CCCCCceeeEEEEEEecCCCceeeeEEEccceeeeeccccceeEEEEcCCCCCCeEEEEEEEEcCCCCCcccee
Q psy7040 526 PE----DDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDNVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIE 601 (716)
Q Consensus 526 p~----~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~~ 601 (716)
+. ..+......|.+...+ .+.+.|++.+..... ........+.|.++...+.+.|+|.|.|..|.......
T Consensus 214 ~~~~~~~~G~~v~l~C~~~g~p----~~~i~W~~~~~~~~~-~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 288 (382)
T 1cs6_A 214 PADTYALTGQMVTLECFAFGNP----VPQIKWRKLDGSQTS-KWLSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGR 288 (382)
T ss_dssp CSEEEEETTCCEEEECEEEEES----CCEEEEEECCSCCSC-CCSBSSSEEEECSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred CCceEEeCCCeEEEEEEEccCC----CCEEEEEECCccccc-EEecCCcEEEEccCChhhCEEEEEEEEcCCCeEEEEEE
Confidence 21 1122323445444333 344999987654322 12233578999999999999999999999987665555
Q ss_pred eeccCCCCCC---ccceeeccceeEEEEEEeeEEEEeeeeccCcee----eEEEEeCCeEeeecc--cceeeEEEEccCC
Q psy7040 602 VVVTDKPSAP---EGPIQWLLTLTDVTWEISNYLQELHSSLMPISL----ESQYLMNDKRVTIDN--VDYFTKITIRPLQ 672 (716)
Q Consensus 602 ~~v~~~p~~~---~~~~~~~~~~v~l~w~i~~y~v~~~~~~~~~~~----~~~W~~~~~~~~~~~--~~~~~~~~i~~l~ 672 (716)
+.|..+|... .......+..+. |.|.+.| .+.|+++|..+.... ......|.|.++.
T Consensus 289 l~V~~~p~~~~~~~~~~~~~g~~~~--------------l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~L~i~~v~ 354 (382)
T 1cs6_A 289 IIIHAQPDWLDVITDTEADIGSDLR--------------WSCVASGKPRPAVRWLRDGQPLASQNRIEVSGGELRFSKLV 354 (382)
T ss_dssp EEEEEEEEEEECCCCEEEETTCCEE--------------EECEEEEESCCEEEEEETTEECCCCSSEEEETTEEEESSCC
T ss_pred EEEecCCCcccCCCccEEcCCCeEE--------------EEEEeeeecCCEEEEEECCEECCCCceEEEECCEEEECcCC
Confidence 5565544311 101111233343 5666665 899999999886541 1122589999999
Q ss_pred CCCcEEEEEEEEcCCCCceeeEEEEEec
Q psy7040 673 RSDTAQYTVTATNSQGKDQVFIEVVVTD 700 (716)
Q Consensus 673 ~~~~y~y~~~a~n~~G~~~~s~~l~v~~ 700 (716)
..|+|.|+|.|.|..|....++.|.|..
T Consensus 355 ~~d~G~Y~C~a~N~~G~~~~~~~l~V~a 382 (382)
T 1cs6_A 355 LEDSGMYQCVAENKHGTVYASAELTVQA 382 (382)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred cccCEEEEEEEEeCCCeEEEEEEEEEeC
Confidence 9999999999999999999999998863
No 74
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.78 E-value=4.4e-18 Score=172.61 Aligned_cols=308 Identities=17% Similarity=0.176 Sum_probs=188.1
Q ss_pred ccEEEEecc-ccCcceEEEEEEEeCCCCc-eeEEEEEEecCCCCCCCC-eEEeEEeCCeEEEEEECCCCCCCCccceEEE
Q psy7040 184 NTKLGVRMA-QRADAGFYTVTAENINGKD-SVEVEVIVLDKPSPPGGP-LKVSNVHAEGVTLDWKVPDDDGGQPIEKYVV 260 (716)
Q Consensus 184 ~~~l~i~~l-~~~~~g~y~c~a~n~~g~~-~~~~~~~v~~~p~~p~~~-~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v 260 (716)
+..|.|.+. +..|+|.|+|.|.|..|.. +..+.+.+...+.....+ ..+....+..+.|.|.++... +...|.+
T Consensus 61 ~g~l~i~~~~~~~D~G~Y~C~A~N~~G~~~s~~~~l~v~~~~~~~~~~~~~~~v~~G~~~~l~C~~~~~~---~~~~~~W 137 (384)
T 3kld_A 61 DGSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLCGPPPHS---GELSYAW 137 (384)
T ss_dssp TTEEEEESCCHHHHCEEEEEEEEETTEEEECCCEEEEEEEECCCSCCCCCCEEEEETCCEEECCCCCSEE---SCEEEEE
T ss_pred CCEEEEcCCCCcccCEEEEEEEEcCcccEEecceEEEEecccccccCCCCceeEEcCCCeEEecCCCCCC---CCeEEEE
Confidence 456777776 8899999999999999973 344555554433222111 234455788899999753211 1222332
Q ss_pred EEEeC---CCCCeEEccccCcccceEEEcCCCCCCeEEEEEEEEcCCCCCCCCcccceEEecC----CCCCC----CCCC
Q psy7040 261 DKMDE---ATGRWTPAGETEGPVTGLEVEGLIPNHKYKFRVRAVNKQGKSEPLTTTASIEAKN----PFNQP----GKPG 329 (716)
Q Consensus 261 ~~~~~---~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~~~~~~~~~~~~----~~~~p----~~p~ 329 (716)
..... ....... ......+.|.++...+.+.|+|.|.|..|..........+.... ....| ..|.
T Consensus 138 ~~~~~~~~~~~~~~~----~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~~~~~~p~~~~~~~~ 213 (384)
T 3kld_A 138 IFNEYPSYQDNRRFV----SQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPE 213 (384)
T ss_dssp EETTEECCCSSSEEE----CTTTCCEEESSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEEEEEECCCEEEEEEEECCS
T ss_pred EECCCCCEeeccEEE----EcCCCcEEEeecCHHHCceEEEEEecccccceeeCCceEEEEccCCcccccCCceeecCCC
Confidence 22110 0111111 12245799999999999999999999876432111111111100 00000 0111
Q ss_pred CcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEEeCCCCCC
Q psy7040 330 TPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGE 409 (716)
Q Consensus 330 ~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~ 409 (716)
.+....+..+.|.|..... +... +.|...+................+.|.++...+.+.|+|.|.|..|...
T Consensus 214 --~~~~~~G~~v~l~C~~~g~----P~p~--i~W~k~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~ 285 (384)
T 3kld_A 214 --TVPAEKGTTVKLECFALGN----PVPT--ILWRRADGKPIARKARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNV 285 (384)
T ss_dssp --EEEEETTSCEEEEEEEEEE----SCCE--EEEEETTCCCCCTTCEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEE
T ss_pred --ceEecCCCcEEEEEEEeec----CCCc--EEEEeCCCccccccceecCCCcEEEECCCChhhCEEEEEEEEcCCCeEE
Confidence 1222345667777765211 2221 2332221110000001123345799999999999999999999988643
Q ss_pred CCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCC
Q psy7040 410 PSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDS 489 (716)
Q Consensus 410 ~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l 489 (716)
.+.. ..+. .+|.+. ..+.+..+..|..+.|.|.+.|.|.+.+.|++++..+....++.+.. ..|.|.++
T Consensus 286 ~~~~---l~v~---~~P~~~-~~~~~~~v~~g~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~----~~L~i~~v 354 (384)
T 3kld_A 286 AKGQ---LTFY---AQPNWV-QIINDIHVAMEESVFWECKANGRPKPTYRWLKNGDPLLTRDRIQIEQ----GTLNITIV 354 (384)
T ss_dssp EEEE---EEEE---EEEEEE-ECCCCEEECTTCCEEEECEEEEESCCEEEEEETTEECCCBTTEEEET----TEEEESSC
T ss_pred EEEE---EEEe---cCCccc-cCCCceEecCCCCEEEEeECCccCCCeEEEEECCEECCCCccEEEeC----CEEEEeec
Confidence 2211 1111 134332 22456788999999999999999999999999999987777776532 28999999
Q ss_pred CCCCceeEEEEEEcCCCceeeEEEEEEE
Q psy7040 490 KRGDSGIYTLAVKNSWGTDKGTAKVTVL 517 (716)
Q Consensus 490 ~~~~~~~y~~~a~n~~g~~~~s~~~~v~ 517 (716)
...|.|.|+|.|.|..|....++.+.|.
T Consensus 355 ~~~D~G~Y~C~A~N~~G~~~~~a~L~V~ 382 (384)
T 3kld_A 355 NLSDAGMYQCVAENKHGVIFSSAELSVI 382 (384)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred ChhhCEEEEEEEEeCCceEEeceEEEEe
Confidence 9999999999999999999888887763
No 75
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=99.78 E-value=1.2e-17 Score=149.98 Aligned_cols=173 Identities=21% Similarity=0.369 Sum_probs=131.1
Q ss_pred EecCCCCCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCCCCCeEEccccCcccceEEEcCCCCCCeEEEEE
Q psy7040 219 VLDKPSPPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEATGRWTPAGETEGPVTGLEVEGLIPNHKYKFRV 298 (716)
Q Consensus 219 v~~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v 298 (716)
+..+|.+|.+ +.+.....+++.|+|++|.. .+.+|.|+++..+ ..+.... .......+.+.+|.|++.|.|+|
T Consensus 3 ~~t~p~~P~~-l~~~~~~~~sv~l~W~~p~~----~i~~Y~v~~~~~~-~~~~~~~-~~~~~~~~~i~~L~p~t~Y~~~V 75 (186)
T 1qr4_A 3 AGTDLDNPKD-LEVSDPTETTLSLRWRRPVA----KFDRYRLTYVSPS-GKKNEME-IPVDSTSFILRGLDAGTEYTISL 75 (186)
T ss_dssp -----CCCEE-EEEESCCSSEEEEEEECCSS----CCSEEEEEEECTT-CCEEEEE-ECTTCSEEEEESCCSSCEEEEEE
T ss_pred ccCCCcCCCc-eEEEecCCCEEEEEEeCCCC----CccEEEEEEEeCC-CCeeEEE-CCCCCCEEEECCCCCCCEEEEEE
Confidence 4567889988 88998899999999998642 5889999998543 3333222 23457899999999999999999
Q ss_pred EEEcCCCCCCCCcccceEEecCCCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeec
Q psy7040 299 RAVNKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTE 378 (716)
Q Consensus 299 ~a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~ 378 (716)
+|.|..|.+.+.. .... ..|.+|.++.+...+.+++.|+|.+|. +.+.+|.|+|+..+...+. .....
T Consensus 76 ~a~~~~~~s~~~~----~~~~---t~p~~P~~l~~~~~~~~sv~l~W~~p~----~~i~~Y~v~~~~~~~~~~~-~~~~~ 143 (186)
T 1qr4_A 76 VAEKGRHKSKPTT----IKGS---TVVGSPKGISFSDITENSATVSWTPPR----SRVDSYRVSYVPITGGTPN-VVTVD 143 (186)
T ss_dssp EEESSSCBCCCEE----EEEE---CCCCCCSCEEEESCCSSCEEEEECCCS----SCCSEEEEEEEETTCCCCE-EEEEE
T ss_pred EEEcCCccCCCEE----EEEE---CCCCCCCccEEEEeCCCEEEEEEECCC----CcccEEEEEEEeCCCCCce-EEEcC
Confidence 9999766554322 2232 347788899999999999999999864 2589999999887643333 33345
Q ss_pred CCCCeEEecCCCCCCeEEEEEEEEeCCCCCCC
Q psy7040 379 GDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEP 410 (716)
Q Consensus 379 ~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~ 410 (716)
....++.|.+|.|++.|.|+|+|.|..|.+.+
T Consensus 144 ~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p 175 (186)
T 1qr4_A 144 GSKTRTKLVKLVPGVDYNVNIISVKGFEESEP 175 (186)
T ss_dssp TTCCEEEECSCCSSCEEEEEEEEEETTEECCC
T ss_pred CCcCEEEEcCCCCCCEEEEEEEEEcCCCcCcC
Confidence 67799999999999999999999999887754
No 76
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=99.77 E-value=1.7e-18 Score=159.93 Aligned_cols=194 Identities=16% Similarity=0.165 Sum_probs=138.8
Q ss_pred CCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCCcEEE-ecccCCCeEEecCC-CCCcEEEEEEEEEecCc
Q psy7040 57 PEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETGVWIP-VGKTREPEMDVTGL-TPGHEYKFRVKALNKEG 134 (716)
Q Consensus 57 p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~-~~~~~~~~~~i~~L-~~~~~y~~~v~a~~~~g 134 (716)
+|.+|.+...+.+++.|+|++|...+ . ..+|.|+++..+...+.. ......+++.|.+| .+++.|.|+|+|.|..|
T Consensus 10 ~P~~l~~~~~~~~sv~l~W~~p~~~~-~-~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~t~Y~~~V~A~n~~G 87 (215)
T 1bqu_A 10 KPKNLSCIVNEGKKMRCEWDGGRETH-L-ETNFTLKSEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALG 87 (215)
T ss_dssp CCEEEEEEEETTSCCEEEEECCSCCS-S-CCEEEEEEEETTEECCCEECCSSCTTEEECSSCCCTTSCEEEEEEEEETTE
T ss_pred CCEeeEeEECCCCcEEEEcCCCCCCC-C-CceEEEEEEEcCCCccccccccCCcceEEEcCCccccccEEEEEEEEeccc
Confidence 33446666777789999999987543 3 579999998654322211 11223479999999 99999999999999999
Q ss_pred cCCCccccceEEecCCCCcccccccccceecccCCCCCCceEEEEecCCccEEEEeccccCcceEEEEEEEeCCCCceeE
Q psy7040 135 ESEPLETFSSIIARDPYSKYTSVSSLDSHKRSNQPCGSGMVRKVQHLDYNTKLGVRMAQRADAGFYTVTAENINGKDSVE 214 (716)
Q Consensus 135 ~~~~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~G~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~ 214 (716)
.+.+... . +...
T Consensus 88 ~~~s~~~-~-~~~~------------------------------------------------------------------ 99 (215)
T 1bqu_A 88 KVTSDHI-N-FDPV------------------------------------------------------------------ 99 (215)
T ss_dssp EEECCCE-E-ECGG------------------------------------------------------------------
T ss_pred CccCCcE-E-eccc------------------------------------------------------------------
Confidence 7652211 1 1000
Q ss_pred EEEEEecCCCCCCCCeEEeEE--eCCeEEEEEECCCCCCCCccceEEEEEEeCCCCCeEEcccc--CcccceEEEcCCCC
Q psy7040 215 VEVIVLDKPSPPGGPLKVSNV--HAEGVTLDWKVPDDDGGQPIEKYVVDKMDEATGRWTPAGET--EGPVTGLEVEGLIP 290 (716)
Q Consensus 215 ~~~~v~~~p~~p~~~~~~~~~--~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~--~~~~~~~~i~~L~p 290 (716)
...+|.+|.+ +.+... ..+++.|+|++|...++ .+.+|.|+++..+...|..+... ......+.|.+|.|
T Consensus 100 ----~~~~p~pP~~-~~~~~~~~~~~sv~l~W~~p~~~~~-~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p 173 (215)
T 1bqu_A 100 ----YKVKPNPPHN-LSVINSEELSSILKLTWTNPSIKSV-IILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKP 173 (215)
T ss_dssp ----GSEECCCCEE-EEEECC--CCSCEEEEEECCGGGGT-SCEEEEEEEEETTCSSCEECCGGGGCSCCSEEEECSCCS
T ss_pred ----ccCcCCCCCc-eEEEEecCCCceEEEEEeCCCCCCc-ceEEEEEEEccCCCCCceEeccccccCccceEEeCCCCC
Confidence 0024667766 666543 66899999998876554 68999999998877788876532 35678999999999
Q ss_pred CCeEEEEEEEEcCCCCCCCCcccceEEecCCCCCCC
Q psy7040 291 NHKYKFRVRAVNKQGKSEPLTTTASIEAKNPFNQPG 326 (716)
Q Consensus 291 ~~~y~~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p~ 326 (716)
++.|.|+|+|.|..|.+.++..+..+...+...+|.
T Consensus 174 ~t~Y~~~V~A~n~~g~g~~S~~S~~~~~~T~~~~P~ 209 (215)
T 1bqu_A 174 FTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRPS 209 (215)
T ss_dssp SEEEEEEEEEEETTSCSCCCCCCCCEEEEECCCHHH
T ss_pred CCEEEEEEEEccCCCCCccCCCCCcccccccccCCc
Confidence 999999999999999877776666565555444443
No 77
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}
Probab=99.77 E-value=3.8e-18 Score=155.48 Aligned_cols=176 Identities=15% Similarity=0.310 Sum_probs=129.9
Q ss_pred CCCCCeEEeEEe--CCeEEEEEECCCCCCCCccceEEEEEEeCCC-CCeEEccccCcccceEEEcCCCCCCeEEEEEEEE
Q psy7040 225 PPGGPLKVSNVH--AEGVTLDWKVPDDDGGQPIEKYVVDKMDEAT-GRWTPAGETEGPVTGLEVEGLIPNHKYKFRVRAV 301 (716)
Q Consensus 225 ~p~~~~~~~~~~--~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~-~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~ 301 (716)
+|.+ +.+.... .+++.|+|.+|. +.++.+|.|+++.... ..|..... ......+.|.+|.|++.|.|+|.|.
T Consensus 2 ~P~~-l~v~~v~~~~~si~l~W~~p~---~~~i~~Y~v~~~~~~~~~~~~~~~~-~~~~~~~~i~~L~p~t~Y~~~V~a~ 76 (201)
T 2ha1_A 2 GPVE-VFITETPSQPNSHPIQWNAPQ---PSHISKYILRWRPKNSVGRWKEATI-PGHLNSYTIKGLKPGVVYEGQLISI 76 (201)
T ss_dssp CCCE-EECCSCSCCSSCEEEEEECCS---STTCCEEEEEEEETTCSSCCEEEEE-CTTCCEEEECSCCTTEEEEEEEEEE
T ss_pred Ccee-EEEEecCCCCCEEEEEEeCCC---CCCceEEEEEEEECCCCCceEEEec-CCCccEEEecCCCCCCEEEEEEEEE
Confidence 4555 6777766 899999999872 3479999999987543 45554432 3457899999999999999999999
Q ss_pred cCCCCCCCCcccceEEe--------cCCCCCCCC-----CCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCC
Q psy7040 302 NKQGKSEPLTTTASIEA--------KNPFNQPGK-----PGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYS 368 (716)
Q Consensus 302 n~~g~~~~~~~~~~~~~--------~~~~~~p~~-----p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~ 368 (716)
|..|.+.++... ..+. ......|.+ |.++.+...+.+++.|+|.+|. +.+.+|.|+|+..+.
T Consensus 77 n~~G~~~~~~~~-~~t~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~~sv~l~W~~p~----~~i~~Y~v~~~~~~~ 151 (201)
T 2ha1_A 77 QQYGHQEVTRFD-FTTTSTSTPVTSNTVTGETTPFSPLVATSESVTEITASSFVVSWVSAS----DTVSGFRVEYELSEE 151 (201)
T ss_dssp CTTSCEEEEEEE-EEECCCCCTTCSCCCCCSCCCCCCSCSCCSSCCCCCSCCEEEECCCSC----TTEEEEEEEEEETTT
T ss_pred ecccccCceeEE-EecCCCCCCcccccccCCCCCCCCccCCceEEEecCCCeEEEEEeCCC----CCccEEEEEEEECCC
Confidence 999987643111 0100 000011221 2567888888999999999873 269999999997654
Q ss_pred CceEEEeeecCCCCeEEecCCCCCCeEEEEEEEEeCCCCCCC
Q psy7040 369 PIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEP 410 (716)
Q Consensus 369 ~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~ 410 (716)
..+...........++.|.+|.|++.|.|+|+|.|..|.|.+
T Consensus 152 ~~~~~~~~v~~~~~~~~i~~L~p~t~Y~~~V~A~~~~G~~~~ 193 (201)
T 2ha1_A 152 GDEPQYLDLPSTATSVNIPDLLPGRKYIVNVYQISEDGEQSL 193 (201)
T ss_dssp CCCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEETTSCEEE
T ss_pred CCceeEEEcCCceeEEEeCCCCCCCEEEEEEEEEcCCCCccc
Confidence 555555556778899999999999999999999999998754
No 78
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=99.77 E-value=1.8e-17 Score=148.86 Aligned_cols=171 Identities=22% Similarity=0.379 Sum_probs=127.8
Q ss_pred CCCCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCCcEEEec-ccCCCeEEecCCCCCcEEEEEEEEEec
Q psy7040 54 GLDPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETGVWIPVG-KTREPEMDVTGLTPGHEYKFRVKALNK 132 (716)
Q Consensus 54 ~~~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~-~~~~~~~~i~~L~~~~~y~~~v~a~~~ 132 (716)
.+.||.+|++..++.+++.|+|++|. .++.+|+|+|+..++ .+.... .....++.|.+|.|++.|.|+|+|.|.
T Consensus 6 ~p~~P~~l~~~~~~~~sv~l~W~~p~----~~i~~Y~v~~~~~~~-~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~ 80 (186)
T 1qr4_A 6 DLDNPKDLEVSDPTETTLSLRWRRPV----AKFDRYRLTYVSPSG-KKNEMEIPVDSTSFILRGLDAGTEYTISLVAEKG 80 (186)
T ss_dssp --CCCEEEEEESCCSSEEEEEEECCS----SCCSEEEEEEECTTC-CEEEEEECTTCSEEEEESCCSSCEEEEEEEEESS
T ss_pred CCcCCCceEEEecCCCEEEEEEeCCC----CCccEEEEEEEeCCC-CeeEEECCCCCCEEEECCCCCCCEEEEEEEEEcC
Confidence 34566668888889999999999974 258999999985543 333322 334589999999999999999999997
Q ss_pred CccCCCccccceEEecCCCCcccccccccceecccCCCCCCceEEEEecCCccEEEEeccccCcceEEEEEEEeCCCCce
Q psy7040 133 EGESEPLETFSSIIARDPYSKYTSVSSLDSHKRSNQPCGSGMVRKVQHLDYNTKLGVRMAQRADAGFYTVTAENINGKDS 212 (716)
Q Consensus 133 ~g~~~~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~G~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~ 212 (716)
.|.+.+..
T Consensus 81 ~~~s~~~~------------------------------------------------------------------------ 88 (186)
T 1qr4_A 81 RHKSKPTT------------------------------------------------------------------------ 88 (186)
T ss_dssp SCBCCCEE------------------------------------------------------------------------
T ss_pred CccCCCEE------------------------------------------------------------------------
Confidence 66553211
Q ss_pred eEEEEEEecCCCCCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCCCCCeEEccccCcccceEEEcCCCCCC
Q psy7040 213 VEVEVIVLDKPSPPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEATGRWTPAGETEGPVTGLEVEGLIPNH 292 (716)
Q Consensus 213 ~~~~~~v~~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~ 292 (716)
+.+...|.+|.+ +.+.....+++.|+|.+|. + ++.+|.|.++..+...+..... ......+.|.+|.|++
T Consensus 89 ----~~~~t~p~~P~~-l~~~~~~~~sv~l~W~~p~---~-~i~~Y~v~~~~~~~~~~~~~~~-~~~~~~~~i~~L~p~t 158 (186)
T 1qr4_A 89 ----IKGSTVVGSPKG-ISFSDITENSATVSWTPPR---S-RVDSYRVSYVPITGGTPNVVTV-DGSKTRTKLVKLVPGV 158 (186)
T ss_dssp ----EEEECCCCCCSC-EEEESCCSSCEEEEECCCS---S-CCSEEEEEEEETTCCCCEEEEE-ETTCCEEEECSCCSSC
T ss_pred ----EEEECCCCCCCc-cEEEEeCCCEEEEEEECCC---C-cccEEEEEEEeCCCCCceEEEc-CCCcCEEEEcCCCCCC
Confidence 112345777877 8888888999999999764 2 5899999998765443333222 2457899999999999
Q ss_pred eEEEEEEEEcCCCCCCCCc
Q psy7040 293 KYKFRVRAVNKQGKSEPLT 311 (716)
Q Consensus 293 ~y~~~v~a~n~~g~~~~~~ 311 (716)
.|.|+|+|.+..|.+.+..
T Consensus 159 ~Y~~~V~A~~~~g~s~p~~ 177 (186)
T 1qr4_A 159 DYNVNIISVKGFEESEPIS 177 (186)
T ss_dssp EEEEEEEEEETTEECCCEE
T ss_pred EEEEEEEEEcCCCcCcCEE
Confidence 9999999999888776543
No 79
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.77 E-value=6.5e-17 Score=159.75 Aligned_cols=251 Identities=15% Similarity=0.159 Sum_probs=169.6
Q ss_pred CCCcccccccccEEEecCCeEEEEEEEecc-CCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEE
Q psy7040 424 VSPYINRDQLSDIKVRAGSNFEFDINVIGE-PIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVK 502 (716)
Q Consensus 424 ~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~-p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~ 502 (716)
.+|.+.. +.++.+.+|+.+.|.|.+.+. |.+.+.|++++..+....++.+. .....|.|.++...|.|.|+|.|.
T Consensus 6 ~~P~~~~--~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~~~ 81 (317)
T 2y25_A 6 TGPHFVE--YLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFK--DGICTLLITEFSKKDAGIYEVILK 81 (317)
T ss_dssp SCCEEEE--EEEEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCSCC-------CCEEEEETTCCSTTCSCEEEEEE
T ss_pred CCCcEee--eeeEEECCCCeEEEEEEEcCCCCCCEEEEEECCeEcCCCCcEEEE--CCeEEEEEccCCcccCeEEEEEEE
Confidence 3565542 235889999999999999887 77899999999998876666554 345799999999999999999999
Q ss_pred cCCCceeeEEEEEEE------------------EEEEEEeCCCCCCCCceeeEEEEEEecC-CCceeeeEEEccceeeee
Q psy7040 503 NSWGTDKGTAKVTVL------------------GCSLKWNPPEDDGGAPIEYYMVEKMETD-TGKVLIKWIRTNDKRVTI 563 (716)
Q Consensus 503 n~~g~~~~s~~~~v~------------------~v~l~W~~p~~~~~~~i~~y~v~~~~~~-~~~~~~~w~~~~~~~~~~ 563 (716)
|..|.......+.+. .+.|.... .+..+...-.. .+.+.+.|++.+......
T Consensus 82 n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~c~~---------~~~~l~c~~~~~~p~~~i~W~~~~~~~~~~ 152 (317)
T 2y25_A 82 DDRGKDKSRLKLVDEAFKELMMEVCKKIALSATDLKIQSTA---------EGIQLYSFVTYYVEDLKVNWSHNGSAIRYS 152 (317)
T ss_dssp SSSCEEEEEECCSTHHHHHHHHHHHHHHHTCBCCCEEEECS---------SEEEEEEEBSSCCSSCEEEEEESSSBCCCC
T ss_pred CCCCcEEEEEEEEEecCccccccCCceecccCCCeEEEeec---------cccEEEEEeccCCCCcEEEEEECCEECCCC
Confidence 999977655444332 22333211 11111111111 234558999887654321
Q ss_pred c-----cccceeEEEEcCCCCCCeEEEEEEEEcCCCCCccceeeecc-----------------CCCCCCcc-------c
Q psy7040 564 D-----NVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVT-----------------DKPSAPEG-------P 614 (716)
Q Consensus 564 ~-----~~~~~~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~~~~v~-----------------~~p~~~~~-------~ 614 (716)
. .......+.|.++...+.+.|+|.|.|..|....+..+.+. .....|.. +
T Consensus 153 ~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 232 (317)
T 2y25_A 153 DRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVV 232 (317)
T ss_dssp SSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHHHHTTTSCEEEEBCCSEE
T ss_pred CCeEEeccCCEEEEEECcCCcccCeeEEEEEEeCCceEEEEEEEeeeeccccchhhcccCCcccCcCCCCcccccCCccE
Confidence 1 11223459999999999999999999988866555444321 01111110 1
Q ss_pred eeeccceeEEEEEEeeEEEEeeeeccCcee----eEEEEeCCeEeeeccc-------ceeeEEEEccCCCCCcEEEEEEE
Q psy7040 615 IQWLLTLTDVTWEISNYLQELHSSLMPISL----ESQYLMNDKRVTIDNV-------DYFTKITIRPLQRSDTAQYTVTA 683 (716)
Q Consensus 615 ~~~~~~~v~l~w~i~~y~v~~~~~~~~~~~----~~~W~~~~~~~~~~~~-------~~~~~~~i~~l~~~~~y~y~~~a 683 (716)
....+..+. |.|.+.| .+.|+++|..+..+.. +....|.|.++...|+|.|+|.|
T Consensus 233 ~v~~g~~~~--------------l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 298 (317)
T 2y25_A 233 TIQEGKALN--------------LTCNVWGDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVV 298 (317)
T ss_dssp EEETTSBBC--------------EEEEEECSSCCEEEEEESSSEECCCSSEEECCBTTTEEEEEEBSCCSTTCEEEEEEE
T ss_pred EEEcCCEEE--------------EEEEEecCCCCEEEEEECCEeCCCCCcEEEEEcCCCEEEEEECCCCHHHCEEEEEEE
Confidence 111222333 6666666 8999999988865411 33358999999999999999999
Q ss_pred EcCCCCceeeEEEEEecC
Q psy7040 684 TNSQGKDQVFIEVVVTDK 701 (716)
Q Consensus 684 ~n~~G~~~~s~~l~v~~~ 701 (716)
.|..|....+..|.|..|
T Consensus 299 ~N~~g~~~~~~~l~V~~P 316 (317)
T 2y25_A 299 KNKYGSETSDFTVSVFIP 316 (317)
T ss_dssp EETTEEEEEEEEEEEECC
T ss_pred EeCCCeEEEEEEEEEEcC
Confidence 999999999999999854
No 80
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=99.77 E-value=2e-17 Score=162.27 Aligned_cols=252 Identities=9% Similarity=-0.011 Sum_probs=164.4
Q ss_pred cEEEecCCeEEEEEEEecc-----CCCeEEEEeCCeEeccCCcEEEEeCCC-eEEEEECCCCCCCceeEEEEEEcCCCce
Q psy7040 435 DIKVRAGSNFEFDINVIGE-----PIPTKEWLCNDITIISKDRFKIVNDDK-STKLKVFDSKRGDSGIYTLAVKNSWGTD 508 (716)
Q Consensus 435 ~~~~~~g~~~~~~~~v~~~-----p~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~l~i~~l~~~~~~~y~~~a~n~~g~~ 508 (716)
+..+..|+.+.|.|.+.+. |.+.+.|.+++..+.. .++.....+. ...|.|.++...|.|.|.|.|.+..+..
T Consensus 9 ~~~v~~G~~v~l~C~~~~~~~~~~~~~~i~W~~~g~~l~~-~~~~~~~~~~~~~~L~i~~~~~~d~g~y~c~~~~~~~~~ 87 (313)
T 2d9q_B 9 APIVHLGDPITASCIIKQNCSHLDPEPQILWRLGAELQPG-GRQQRLSDGTQESIITLPHLNHTQAFLSCSLNWGNSLQI 87 (313)
T ss_dssp CSEECTTCCEEEEECCCTTSCSSCSCSCCEEESSSCBCTT-CEECCCSSSCCCEEEEESCCCSSEEEEEEEEESSSSEEE
T ss_pred CcEEcCCCCEEEEEEECCCCCCCCcccceEEEeCCEECCc-cceEEEecCeEEEEEEEeccCCCccceEEeeecCCCcee
Confidence 4568899999999999987 5788999999987743 2222222222 2689999999999999999987644432
Q ss_pred eeEEEEEEE------------------EEEEEEeCCCCCCCCceeeEEEEEEecCCCc--eeeeEEEccceeeeeccccc
Q psy7040 509 KGTAKVTVL------------------GCSLKWNPPEDDGGAPIEYYMVEKMETDTGK--VLIKWIRTNDKRVTIDNVDY 568 (716)
Q Consensus 509 ~~s~~~~v~------------------~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~--~~~~w~~~~~~~~~~~~~~~ 568 (716)
...+.+.+. ++.++|+++.+. +. ...|.|+++...... ....|...... ..
T Consensus 88 ~~~~~l~v~~~P~~P~~l~c~~~~~~~~~~~~W~~~~~~-~~-~~~Y~l~~~~~~~~~~~~~~~~~~~~~~-------~~ 158 (313)
T 2d9q_B 88 LDQVELRAGYPPAIPHNLSCLMNLTTSSLICQWEPGPET-HL-PTSFTLKSFKSRGNCQTQGDSILDCVPK-------DG 158 (313)
T ss_dssp EEEEEEEECCCCCCCEEEEEEEETTTTEEEEEEECCSCC-SS-CCEEEEEEEECCTTSCSCCCCEEEECCC-------TT
T ss_pred EEEEEEccCCCCCCCccceeeECCCCccEEEEecCCCCC-CC-ceeEEEEEEecCCCcccCCcccccCCCC-------CC
Confidence 223333322 799999998653 34 456999988654210 01233322110 01
Q ss_pred eeEEEE--cCCCCCCeEEEEEEEEcCCCCCcccee-eec-----cCCCCCCccceee------ccceeEEEEE-------
Q psy7040 569 FTKITI--RPLQRSDTAQYTVTATNSQGKDQVFIE-VVV-----TDKPSAPEGPIQW------LLTLTDVTWE------- 627 (716)
Q Consensus 569 ~~~~~i--~~L~~~~~y~~~v~a~n~~G~~~~s~~-~~v-----~~~p~~~~~~~~~------~~~~v~l~w~------- 627 (716)
...+.+ .+|.+.+.|.|+|.|.|..|.+..... +.. +.+|..+. +... ..+++.|+|+
T Consensus 159 ~~~~~~~~~~L~~~~~Y~f~V~A~N~~G~~~s~~~~~~~~~~~~p~pP~~~~-~~~~~~~~~~~~~~l~l~W~~p~~~~~ 237 (313)
T 2d9q_B 159 QSHCSIPRKHLLLYQNMGIWVQAENALGTSMSPQLCLDPMDVVKLEPPMLRT-MDPSPEAAPPQAGCLQLSWEPWQPGLH 237 (313)
T ss_dssp CSEEEEEGGGCCSSSCEEEEEEEEETTEEEECCCEEECGGGGEECCCCEEEE-CCC-------CCSCEEEEEECCGGGTT
T ss_pred CcEEEECccccccceeEEEEEEEECCCCCccCccEEEehhheeccCcCceeE-EEEecccccCCCCeEEEEECCCCCCCc
Confidence 134445 569999999999999999998643222 221 44454443 3333 3578999999
Q ss_pred -EeeEEEEee-eeccCceeeEEEEeCCeEeeecccceeeEEEEccCCCCCcEEEEEEEEcCCCCce---eeEEEEEecCC
Q psy7040 628 -ISNYLQELH-SSLMPISLESQYLMNDKRVTIDNVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQ---VFIEVVVTDKP 702 (716)
Q Consensus 628 -i~~y~v~~~-~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~y~~~a~n~~G~~~---~s~~l~v~~~p 702 (716)
+.+|.|+|+ ... .-.|..... .......+.|.+|.+++.|.++++|.|..|.+. +|..+.+.++.
T Consensus 238 ~~l~Y~v~y~~~~~-----~~~w~~~~~-----~~~~~~~~~l~~L~p~t~Y~~rVra~~~~g~G~wS~wS~~~~~~T~~ 307 (313)
T 2d9q_B 238 INQKCELRHKPQRG-----EASWALVGP-----LPLEALQYELCGLLPATAYTLQIRCIRWPLPGHWSDWSPSLELRTTE 307 (313)
T ss_dssp SCEEEEEEEEESSS-----CCCCEEEEE-----ECSCEEEEEECSCCSCCCEEEEEEEEECSSCCCCCCCCCCEEECCCC
T ss_pred eeEEEEEEEccCCC-----CCCcEEccc-----ccCcceEEEEeCCCCCCeEEEEEEeeECCCCCccCCCCCccceeCCc
Confidence 368999887 421 223432111 112346799999999999999999999987774 66778899988
Q ss_pred CCCCC
Q psy7040 703 SAPEG 707 (716)
Q Consensus 703 ~~p~~ 707 (716)
.+|.+
T Consensus 308 ~~P~~ 312 (313)
T 2d9q_B 308 RAAAP 312 (313)
T ss_dssp -----
T ss_pred cCCCC
Confidence 88854
No 81
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.77 E-value=2.8e-17 Score=151.78 Aligned_cols=176 Identities=19% Similarity=0.264 Sum_probs=143.5
Q ss_pred CCcccccccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccC--CcEEEEeCCCeEEEEECCCCCCCceeEEEEEE
Q psy7040 425 SPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISK--DRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVK 502 (716)
Q Consensus 425 ~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~--~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~ 502 (716)
+|.+. .+..+.+..|+.+.|.|.+.+.|.+.+.|++++..+... .++.+...+....|.|.++...|.|.|+|.|.
T Consensus 19 ~P~~~--~p~~~~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 96 (215)
T 3mtr_A 19 APKLQ--GPVAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAV 96 (215)
T ss_dssp EEEEE--CCSEEEECTTCCEEEEEEEEEESCCEEEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEEEE
T ss_pred CCccc--CCceEEEECCCCEEEEEEEeecCCCEEEEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEEEE
Confidence 45542 344578999999999999999999999999999988765 56677766778899999999999999999999
Q ss_pred cCCCceeeEEEEEEE----------------EEEEEEeCCCCCCCCceeeEEEEEEecCCCceeeeEEEccceeeeeccc
Q psy7040 503 NSWGTDKGTAKVTVL----------------GCSLKWNPPEDDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDNV 566 (716)
Q Consensus 503 n~~g~~~~s~~~~v~----------------~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~~ 566 (716)
|..|.......+.+. ++.|+|..|..+++.++.+|.|++..... ..|........ ..
T Consensus 97 n~~g~~~~~~~l~v~~~P~~p~~~~~~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~----~~w~~~~~~~~---~~ 169 (215)
T 3mtr_A 97 NRIGQESLEFILVQADTPSSPSIDQVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGE----EVWHSKWYDAK---EA 169 (215)
T ss_dssp CSSCEEEEEEEEEECCCCCCCEEEEEEEETTEEEEEEECCSCCCSSCEEEEEEEEEETTC----CCCEEEEEEHH---HH
T ss_pred ECCCceEEEEEEEECCCCCCCcceEEEEecceEEEEEecCCccCCCceEEEEEEEEECCC----Ccccccccccc---cc
Confidence 999988877777664 88999999887788889999999998877 56664321110 00
Q ss_pred cceeEEEEcCCCCCCeEEEEEEEEcCCCCCccceeeeccCCCC
Q psy7040 567 DYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTDKPS 609 (716)
Q Consensus 567 ~~~~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~~~~v~~~p~ 609 (716)
.....+.|.+|.+++.|.|+|.|.|..|.|.++..+.+..+|.
T Consensus 170 ~~~~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~T~p~ 212 (215)
T 3mtr_A 170 SMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPV 212 (215)
T ss_dssp HHHTEEEEECCCTTCEEEEEEEEEESSCBCCCCCCEEEECCC-
T ss_pred cccccEEECCCCCCCEEEEEEEEEeCCcccCcccceeeEeccc
Confidence 1127899999999999999999999999999998887766553
No 82
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=99.77 E-value=1.2e-17 Score=152.04 Aligned_cols=174 Identities=21% Similarity=0.368 Sum_probs=129.3
Q ss_pred CCCCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCCcEE-Ee-cccCCCeEEecCCCCCcEEEEEEEEEe
Q psy7040 54 GLDPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETGVWI-PV-GKTREPEMDVTGLTPGHEYKFRVKALN 131 (716)
Q Consensus 54 ~~~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~-~~-~~~~~~~~~i~~L~~~~~y~~~v~a~~ 131 (716)
++++|..|.+..++.+++.|+|++|. +..+.+|+|+|+..+...+. .. .....+++.|.+|.|++.|.|+|+|.|
T Consensus 22 ~~P~P~~l~~~~~~~~sv~lsW~~p~---~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~ 98 (203)
T 2gee_A 22 EVPQPTDLSFVDITDSSIGLRWTPLN---SSTIIGYRITVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVYTVK 98 (203)
T ss_dssp CCCCCEEEEEECCTTTCEEEEEECCS---SSSCCEEEEEEEESSSSSCCEEEEEETTCCEEEECSCCTTCEEEEEEEEES
T ss_pred cCcCCCccEEEecCCCEEEEEecCCC---CCCccEEEEEEEECCCCCCceeEEcCCCccEEEeCCCCCCCEEEEEEEEEe
Confidence 44555667788888999999999986 24599999999877654332 22 223458999999999999999999999
Q ss_pred cCccCCCccccceEEecCCCCcccccccccceecccCCCCCCceEEEEecCCccEEEEeccccCcceEEEEEEEeCCCCc
Q psy7040 132 KEGESEPLETFSSIIARDPYSKYTSVSSLDSHKRSNQPCGSGMVRKVQHLDYNTKLGVRMAQRADAGFYTVTAENINGKD 211 (716)
Q Consensus 132 ~~g~~~~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~G~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~ 211 (716)
..|.+.++.. .+
T Consensus 99 ~~g~s~~~~~---~t----------------------------------------------------------------- 110 (203)
T 2gee_A 99 NGGESTPTTL---TQ----------------------------------------------------------------- 110 (203)
T ss_dssp SSCBCCCEEE---EE-----------------------------------------------------------------
T ss_pred CCCccccEee---ee-----------------------------------------------------------------
Confidence 8876654321 11
Q ss_pred eeEEEEEEecCCCCCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCCCC-CeEEccccCcccceEEEcCCCC
Q psy7040 212 SVEVEVIVLDKPSPPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEATG-RWTPAGETEGPVTGLEVEGLIP 290 (716)
Q Consensus 212 ~~~~~~~v~~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~-~~~~~~~~~~~~~~~~i~~L~p 290 (716)
...+| +|.+ +.+.....+++.|+|++|.. + .+.+|.|.+...... .+... ........+.|.+|.|
T Consensus 111 -------~~~~p-~P~~-l~~~~~~~~sv~l~W~~p~~--~-~i~~Y~v~~~~~~~~~~~~~~-~~~~~~~~~~i~~L~p 177 (203)
T 2gee_A 111 -------QTAVP-PPTD-LRFTNIGPDTMRVTWAPPPS--I-DLTNFLVRYSPVKNEEDVAEL-SISPSDNAVVLTNLLP 177 (203)
T ss_dssp -------ECCCC-CCEE-EEEEEEETTEEEEEEECCSS--C-CCSEEEEEEEETTCGGGCEEE-EECTTCCEEEECSCCT
T ss_pred -------cCCCc-CCCc-eEEEEcCCCEEEEEEcCCCC--C-CccEEEEEEEECCCCCccEEE-EcCCCcCEEEECCCCC
Confidence 01233 5666 78888899999999998742 2 689999999875432 23322 2235678999999999
Q ss_pred CCeEEEEEEEEcCCCCCCCCc
Q psy7040 291 NHKYKFRVRAVNKQGKSEPLT 311 (716)
Q Consensus 291 ~~~y~~~v~a~n~~g~~~~~~ 311 (716)
++.|.|+|+|.|..|.+.+..
T Consensus 178 ~t~Y~~~V~A~~~~g~s~p~~ 198 (203)
T 2gee_A 178 GTEYVVSVSSVYEQHESTPLR 198 (203)
T ss_dssp TCEEEEEEEEEETTEECCCEE
T ss_pred CCEEEEEEEEecCCCcCCCee
Confidence 999999999999988876544
No 83
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.76 E-value=3.6e-17 Score=167.81 Aligned_cols=287 Identities=18% Similarity=0.184 Sum_probs=185.5
Q ss_pred CCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEE-eccCCCeEEEEeCCeE
Q psy7040 388 DLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINV-IGEPIPTKEWLCNDIT 466 (716)
Q Consensus 388 ~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v-~~~p~~~~~W~~~~~~ 466 (716)
++...+...|+|.|.|..|...... ....+. .+|.+.........+.+|+.+.|.|.+ .+.|.+.+.|++++..
T Consensus 83 ~~~~~D~G~Y~C~a~n~~g~~~s~~--~~l~V~---~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~ 157 (404)
T 3p3y_A 83 GRPEEYEGEYQCFARNKFGTALSNR--IRLQVS---KSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSME 157 (404)
T ss_dssp CCTTSSCEEEEEEEECSSCEEEEEE--EEEEEC---CCCCCCCCCCCCEEEETTSCEEECCCCCCCSSCCEEEEECTTSC
T ss_pred CCCccCCEEEEEEEEcCCCeEeeee--EEEEEe---ccCccccCCCCCeEEccCCcEEEEeCCCCCCCCCeEEEeCCCcc
Confidence 6677889999999999877532111 111222 233333334456789999999999999 8899999999998754
Q ss_pred ec-cCCcEEEEeCCCeEEEEECCCCCCC-ceeEEEEEEcCCCceeeE---EEEEEEEE-EEEEeCCC-------------
Q psy7040 467 II-SKDRFKIVNDDKSTKLKVFDSKRGD-SGIYTLAVKNSWGTDKGT---AKVTVLGC-SLKWNPPE------------- 527 (716)
Q Consensus 467 ~~-~~~~~~~~~~~~~~~l~i~~l~~~~-~~~y~~~a~n~~g~~~~s---~~~~v~~v-~l~W~~p~------------- 527 (716)
.. ...++.... ...|.|.++...| .|.|+|.|.|..|..... ..+.+... .+.-.+|.
T Consensus 158 ~~~~~~~~~~~~---~~~l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~~~~~~~~~~~~~~ 234 (404)
T 3p3y_A 158 PITQDKRVSQGH---NGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMV 234 (404)
T ss_dssp BCCCCSSEEECT---TSCEEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEECCSCCCCCCCCBSSSCSSEEEEEE
T ss_pred ccCCCCcEEEcC---CCcEEEEeeeeccCCcceEEEEEeccccceeccCceeEEEeccCCccccCCccccccCCCCCceE
Confidence 33 333333322 2369999999999 499999999988764322 22222200 00000010
Q ss_pred CCCCCceeeEEEEEEecCCCceeeeEEEccceeeeec--cccceeEEEEcCCCCCCeEEEEEEEEcCCCCCccceeeecc
Q psy7040 528 DDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTID--NVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVT 605 (716)
Q Consensus 528 ~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~--~~~~~~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~~~~v~ 605 (716)
..+.. ..+.....+.+.+.+.|++.+....... .......+.|.++...+.+.|+|.|.|..|.......+.|.
T Consensus 235 ~~G~~----v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 310 (404)
T 3p3y_A 235 LRGMD----LLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVK 310 (404)
T ss_dssp ETTSC----EEEECCBCCSSCCEEEEEETTBCCCTTTEEEEGGGTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred ecCCC----EEEEEEECCCCCCcEEEEECCEECCCCcccccccCceEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEEe
Confidence 00111 2233333333455699999876543111 11223679999999999999999999999876666555565
Q ss_pred CCCCC---CccceeeccceeEEEEEEeeEEEEeeeeccCcee----eEEEEeCCeEeeecc-----cceeeEEEEccCCC
Q psy7040 606 DKPSA---PEGPIQWLLTLTDVTWEISNYLQELHSSLMPISL----ESQYLMNDKRVTIDN-----VDYFTKITIRPLQR 673 (716)
Q Consensus 606 ~~p~~---~~~~~~~~~~~v~l~w~i~~y~v~~~~~~~~~~~----~~~W~~~~~~~~~~~-----~~~~~~~~i~~l~~ 673 (716)
.+|.. |.......+..+. |.|.+.| .+.|+++|..+.... ......|.|.++..
T Consensus 311 ~~p~~~~~~~~~~v~~g~~~~--------------l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~ 376 (404)
T 3p3y_A 311 AAPYWLDEPKNLILAPGEDGR--------------LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQI 376 (404)
T ss_dssp EEEEEEECCCCEEECTTCCEE--------------EECEEEEESCCEEEEEETTEEGGGSCCCTTEEEETTEEEESSCCS
T ss_pred CCCeeeccCCcceeecCCcEE--------------EEEEccccCCCceEEEECCEecCCCCCCceEEecCCEEEEeecCH
Confidence 54421 1101111233444 5566655 899999999886541 11225799999999
Q ss_pred CCcEEEEEEEEcCCCCceeeEEEEEec
Q psy7040 674 SDTAQYTVTATNSQGKDQVFIEVVVTD 700 (716)
Q Consensus 674 ~~~y~y~~~a~n~~G~~~~s~~l~v~~ 700 (716)
.|+|.|+|.|.|..|....++.|.|.+
T Consensus 377 ~d~G~Y~C~a~N~~G~~~~~~~l~V~d 403 (404)
T 3p3y_A 377 SSRAVYQCNTSNEHGYLLANAFVSVLD 403 (404)
T ss_dssp SCCCEEEEEEEETTEEEEEEEEEEEC-
T ss_pred HHCEEEEEEEEeCCCcEEEEEEEEEEe
Confidence 999999999999999999999998864
No 84
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.76 E-value=3.6e-17 Score=159.37 Aligned_cols=251 Identities=20% Similarity=0.277 Sum_probs=165.7
Q ss_pred cccEEEecCCeEEEEEEEeccCCCeEEEEe-CCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCcee-e
Q psy7040 433 LSDIKVRAGSNFEFDINVIGEPIPTKEWLC-NDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDK-G 510 (716)
Q Consensus 433 ~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~-~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~-~ 510 (716)
+.++.+..|+.+.|.|.+.+.|. .+.|++ ++..+....++.+...+....|.|.++...|.|.|+|.|.|..|... .
T Consensus 11 ~~~~~v~~G~~v~l~C~~~~~p~-~v~W~~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~ 89 (291)
T 2wim_A 11 LSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEA 89 (291)
T ss_dssp CSEEEEETTCCEEEEEEEESCCS-EEECBCTTCCBCCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSSCEEEE
T ss_pred ccceEecCCCcEEEEEEEeCCCC-ceEEECCCCcCccCCCcEEEecCCCEEEEEEccCCcccCEEEEEEEecccCceEEE
Confidence 44678999999999999999875 899999 67777777788887777788999999999999999999999988753 3
Q ss_pred EEEEEEEEEEEEEeC-CC----CCCCCceeeEEEEEEecCCCceeeeEEEccceeeeec----cccceeEEEEcCCCCCC
Q psy7040 511 TAKVTVLGCSLKWNP-PE----DDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTID----NVDYFTKITIRPLQRSD 581 (716)
Q Consensus 511 s~~~~v~~v~l~W~~-p~----~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~----~~~~~~~~~i~~L~~~~ 581 (716)
...+.+.. ...+.. +. ..+.. ..+.....+.+.+.+.|++.+....... .......+.|.++...+
T Consensus 90 ~~~l~v~~-~~~~~~~~~~~~v~~G~~----v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d 164 (291)
T 2wim_A 90 TVVLEIYQ-KLTFREVVSPQEFKQGED----AEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSD 164 (291)
T ss_dssp EEEEEEEC-CCBCCSCCCSEEEETTSC----EEECCCCBCSSCCEEEEECC----CBCCCSSEEECTTSCEEETTCCGGG
T ss_pred EEEEEecC-CcceEeCCCChhhcCCCC----EEEEEEEccCCCCEEEEEECCccccccCCceEEEccCCCEEEEecchhh
Confidence 34444330 000000 00 00111 1222222233445589988765433211 11123579999999999
Q ss_pred eEEEEEEEEcCCCCCccceeee--ccCCCCCCcc-----ceeeccceeEEEEEEeeEEEEeeeeccCcee----eEEEEe
Q psy7040 582 TAQYTVTATNSQGKDQVFIEVV--VTDKPSAPEG-----PIQWLLTLTDVTWEISNYLQELHSSLMPISL----ESQYLM 650 (716)
Q Consensus 582 ~y~~~v~a~n~~G~~~~s~~~~--v~~~p~~~~~-----~~~~~~~~v~l~w~i~~y~v~~~~~~~~~~~----~~~W~~ 650 (716)
.+.|+|.|.|..+....+..+. +..+|..... .....+..+. |.|.+.| .+.|++
T Consensus 165 ~G~Y~C~~~n~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~g~~~~--------------l~C~~~g~p~p~v~W~~ 230 (291)
T 2wim_A 165 EGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMT--------------FSCRASGSPEPAISWFR 230 (291)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEEEEEBCCCCBCSCSEEECCSSSCCEEE--------------EECBCCCBSCCEEEEEE
T ss_pred CEEEEEEEEECCCCeeEEeeEEEEeccCCccccCcccccceecCCCeEE--------------EEEEeecCCCCeEEEEE
Confidence 9999999999875433333222 4444432110 1111123333 6777776 899999
Q ss_pred CCeEeeecc----cceeeEEEEccCCCCCcEEEEEEEEcCCCCceeeEEEEEecCCC
Q psy7040 651 NDKRVTIDN----VDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTDKPS 703 (716)
Q Consensus 651 ~~~~~~~~~----~~~~~~~~i~~l~~~~~y~y~~~a~n~~G~~~~s~~l~v~~~p~ 703 (716)
+|..+.... ......|.|.++...|+|.|+|.|.|..|....++.|.|..++.
T Consensus 231 ~g~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~~~ 287 (291)
T 2wim_A 231 NGKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQHH 287 (291)
T ss_dssp TTEECCCTTTEEECSTTCEEEEESCCSTTCEEEEEEEEETTEEEEEEEEEEC-----
T ss_pred CCEECcCCccEEEcCCccEEEEeeCCcccCEEEEEEEEECCCceeeeEEEEEEEecc
Confidence 999887541 22236899999999999999999999999999999999988653
No 85
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}
Probab=99.75 E-value=1.1e-17 Score=152.37 Aligned_cols=185 Identities=15% Similarity=0.301 Sum_probs=128.9
Q ss_pred CCCCceEEEEe--CCeEEEEecCCCCCCCCccceEEEEEEcCCC-CcEEEecc-cCCCeEEecCCCCCcEEEEEEEEEec
Q psy7040 57 PEGPLEVSNIH--KDGCTLKWNKPKDDGGEPLEGYLVEKYDPET-GVWIPVGK-TREPEMDVTGLTPGHEYKFRVKALNK 132 (716)
Q Consensus 57 p~~~l~~~~~~--~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~-~~~~~~~~-~~~~~~~i~~L~~~~~y~~~v~a~~~ 132 (716)
+|.+|.+.+++ .+++.|+|++| .+.++.+|.|+|+..+. +.|..... ...+++.|.+|.|++.|.|+|+|.|.
T Consensus 2 ~P~~l~v~~v~~~~~si~l~W~~p---~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~n~ 78 (201)
T 2ha1_A 2 GPVEVFITETPSQPNSHPIQWNAP---QPSHISKYILRWRPKNSVGRWKEATIPGHLNSYTIKGLKPGVVYEGQLISIQQ 78 (201)
T ss_dssp CCCEEECCSCSCCSSCEEEEEECC---SSTTCCEEEEEEEETTCSSCCEEEEECTTCCEEEECSCCTTEEEEEEEEEECT
T ss_pred CceeEEEEecCCCCCEEEEEEeCC---CCCCceEEEEEEEECCCCCceEEEecCCCccEEEecCCCCCCEEEEEEEEEec
Confidence 45567777777 89999999998 34569999999987553 55655433 33589999999999999999999999
Q ss_pred CccCCCccccceEEecC-CCCcccccccccceecccCCCCCCceEEEEecCCccEEEEeccccCcceEEEEEEEeCCCCc
Q psy7040 133 EGESEPLETFSSIIARD-PYSKYTSVSSLDSHKRSNQPCGSGMVRKVQHLDYNTKLGVRMAQRADAGFYTVTAENINGKD 211 (716)
Q Consensus 133 ~g~~~~s~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~p~G~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~ 211 (716)
.|.+.++. ....+..+ +.....
T Consensus 79 ~G~~~~~~-~~~~t~~~~~~~~~~-------------------------------------------------------- 101 (201)
T 2ha1_A 79 YGHQEVTR-FDFTTTSTSTPVTSN-------------------------------------------------------- 101 (201)
T ss_dssp TSCEEEEE-EEEEECCCCCTTCSC--------------------------------------------------------
T ss_pred ccccCcee-EEEecCCCCCCcccc--------------------------------------------------------
Confidence 99876542 11111110 100000
Q ss_pred eeEEEEEEecCCCC-C----CCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCCCCCeEEccccCcccceEEEc
Q psy7040 212 SVEVEVIVLDKPSP-P----GGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEATGRWTPAGETEGPVTGLEVE 286 (716)
Q Consensus 212 ~~~~~~~v~~~p~~-p----~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~ 286 (716)
.+...|.+ | .+ +.+.....+++.|+|.+|. + ++.+|.|.+.......|.......+....+.|.
T Consensus 102 ------~~~~~~~~~p~~~~~~-l~~~~~~~~sv~l~W~~p~---~-~i~~Y~v~~~~~~~~~~~~~~~v~~~~~~~~i~ 170 (201)
T 2ha1_A 102 ------TVTGETTPFSPLVATS-ESVTEITASSFVVSWVSAS---D-TVSGFRVEYELSEEGDEPQYLDLPSTATSVNIP 170 (201)
T ss_dssp ------CCCCSCCCCCCSCSCC-SSCCCCCSCCEEEECCCSC---T-TEEEEEEEEEETTTCCCCEEEEEETTCCEEEEC
T ss_pred ------cccCCCCCCCCccCCc-eEEEecCCCeEEEEEeCCC---C-CccEEEEEEEECCCCCceeEEEcCCceeEEEeC
Confidence 00011211 1 33 6777788899999999873 2 689999999865444443333334567899999
Q ss_pred CCCCCCeEEEEEEEEcCCCCCCCCcc
Q psy7040 287 GLIPNHKYKFRVRAVNKQGKSEPLTT 312 (716)
Q Consensus 287 ~L~p~~~y~~~v~a~n~~g~~~~~~~ 312 (716)
+|.|++.|.|+|.|.|..|.+.+...
T Consensus 171 ~L~p~t~Y~~~V~A~~~~G~~~~~s~ 196 (201)
T 2ha1_A 171 DLLPGRKYIVNVYQISEDGEQSLILS 196 (201)
T ss_dssp SCCTTCEEEEEEEEEETTSCEEEEEE
T ss_pred CCCCCCEEEEEEEEEcCCCCcccEee
Confidence 99999999999999999998765443
No 86
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.75 E-value=6.5e-17 Score=165.88 Aligned_cols=315 Identities=18% Similarity=0.148 Sum_probs=195.5
Q ss_pred CccEEEEe----ccccCcceEEEEEEEeCCCCc-eeEEEEEEecCCCCCCCCe-EEeEEeCCeEEEEEECCCCCCCCccc
Q psy7040 183 YNTKLGVR----MAQRADAGFYTVTAENINGKD-SVEVEVIVLDKPSPPGGPL-KVSNVHAEGVTLDWKVPDDDGGQPIE 256 (716)
Q Consensus 183 ~~~~l~i~----~l~~~~~g~y~c~a~n~~g~~-~~~~~~~v~~~p~~p~~~~-~~~~~~~~~~~l~W~~p~~~~~~~~~ 256 (716)
.+..|.|. +++..|+|.|+|.|.|..|.. +..+.+.|..+|..+.... ......++.+.|.|..+. +.+..
T Consensus 71 ~~~~l~i~~~~~~~~~~D~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~---~~p~~ 147 (404)
T 3p3y_A 71 RSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPP---GLPSP 147 (404)
T ss_dssp SSCCCBCCCTTTCCTTSSCEEEEEEEECSSCEEEEEEEEEEECCCCCCCCCCCCCEEEETTSCEEECCCCCC---CSSCC
T ss_pred CCceEEEEeccCCCCccCCEEEEEEEEcCCCeEeeeeEEEEEeccCccccCCCCCeEEccCCcEEEEeCCCC---CCCCC
Confidence 34556664 788999999999999999986 4678888888776654322 244557889999999632 22333
Q ss_pred eEEEEEEeCCCCCeEEc-cccCcccceEEEcCCCCCC-eEEEEEEEEcCCCCCCCCcccceEEecC-CCCCCCCCC----
Q psy7040 257 KYVVDKMDEATGRWTPA-GETEGPVTGLEVEGLIPNH-KYKFRVRAVNKQGKSEPLTTTASIEAKN-PFNQPGKPG---- 329 (716)
Q Consensus 257 ~y~v~~~~~~~~~~~~~-~~~~~~~~~~~i~~L~p~~-~y~~~v~a~n~~g~~~~~~~~~~~~~~~-~~~~p~~p~---- 329 (716)
.+. |...+....... .........+.|.++...+ .+.|+|.|.|..|..........+.+.. +.....+|.
T Consensus 148 ~v~--W~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~~~~~ 225 (404)
T 3p3y_A 148 VIF--WMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYP 225 (404)
T ss_dssp EEE--EECTTSCBCCCCSSEEECTTSCEEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEECCSCCCCCCCCBSSS
T ss_pred eEE--EeCCCccccCCCCcEEEcCCCcEEEEeeeeccCCcceEEEEEeccccceeccCceeEEEeccCCccccCCccccc
Confidence 333 322211100000 0001234579999999999 4999999999877532222211122211 111111111
Q ss_pred --C-cEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEEeCCC
Q psy7040 330 --T-PEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGG 406 (716)
Q Consensus 330 --~-~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g 406 (716)
. -......+..+.|.|..... +.. .+.|...+................+.|.++...+.+.|+|.|.|..|
T Consensus 226 ~~~~~~~~~~~G~~v~l~C~~~g~----p~~--~v~W~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g 299 (404)
T 3p3y_A 226 QGTASSQMVLRGMDLLLECIASGV----PTP--DIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMG 299 (404)
T ss_dssp CSSEEEEEEETTSCEEEECCBCCS----SCC--EEEEEETTBCCCTTTEEEEGGGTEEEESSCCGGGCEEEEEEEECSSC
T ss_pred cCCCCCceEecCCCEEEEEEECCC----CCC--cEEEEECCEECCCCcccccccCceEEEccCCHhHCEEEEEEEEeCCC
Confidence 1 12333456778999976322 222 23343332110000001122346799999999999999999999887
Q ss_pred CCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCc-EEEEeCCCeEEEE
Q psy7040 407 PGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDR-FKIVNDDKSTKLK 485 (716)
Q Consensus 407 ~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~-~~~~~~~~~~~l~ 485 (716)
....+ ....+. .+|.+. ..+....+..|+.+.|.|.+.+.|.+.+.|++++..+..... ...... ...|.
T Consensus 300 ~~~~~---~~l~V~---~~p~~~-~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~--~~~L~ 370 (404)
T 3p3y_A 300 SIRHT---ISVRVK---AAPYWL-DEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVA--GDTII 370 (404)
T ss_dssp EEEEE---EEEEEE---EEEEEE-ECCCCEEECTTCCEEEECEEEEESCCEEEEEETTEEGGGSCCCTTEEEE--TTEEE
T ss_pred cEEEE---EEEEEe---CCCeee-ccCCcceeecCCcEEEEEEccccCCCceEEEECCEecCCCCCCceEEec--CCEEE
Confidence 53221 111111 134333 234557888999999999999999999999999998865431 111112 23899
Q ss_pred ECCCCCCCceeEEEEEEcCCCceeeEEEEEEE
Q psy7040 486 VFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVL 517 (716)
Q Consensus 486 i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v~ 517 (716)
|.++...|.|.|+|.|.|..|....++.+.+.
T Consensus 371 i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 402 (404)
T 3p3y_A 371 FRDTQISSRAVYQCNTSNEHGYLLANAFVSVL 402 (404)
T ss_dssp ESSCCSSCCCEEEEEEEETTEEEEEEEEEEEC
T ss_pred EeecCHHHCEEEEEEEEeCCCcEEEEEEEEEE
Confidence 99999999999999999999999888877764
No 87
>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A
Probab=99.74 E-value=1.2e-16 Score=163.46 Aligned_cols=277 Identities=13% Similarity=0.125 Sum_probs=168.2
Q ss_pred CCCCCCCceEEEEeCCeEEEEecCCCCCCC-----CccceEEEEEEcCCCCcEEEecc--cCCCeEEec--CCCCCcEEE
Q psy7040 54 GLDPEGPLEVSNIHKDGCTLKWNKPKDDGG-----EPLEGYLVEKYDPETGVWIPVGK--TREPEMDVT--GLTPGHEYK 124 (716)
Q Consensus 54 ~~~p~~~l~~~~~~~~s~~l~W~~p~~~~~-----~~i~~y~v~~~~~~~~~~~~~~~--~~~~~~~i~--~L~~~~~y~ 124 (716)
.+.||.+|.+.... ..+.|+|++|..... .....|+|+|+..+ ..|..... .....+.+. +|.|++.|.
T Consensus 108 ~p~pP~~l~v~~~~-~~~~l~W~~p~~~~~~~~~~~~~l~Y~v~yr~~~-~~w~~~~~~~~~~~~~~~~~~~L~p~~~Y~ 185 (419)
T 2gys_A 108 QPPEPRDLQISTDQ-DHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQ-DSWEDAAILLSNTSQATLGPEHLMPSSTYV 185 (419)
T ss_dssp CCCCCEEEEEEEET-TEEEEEEECCC-----CCSCGGGEEEEEEEEETT-SCSTTCEEEEESSSEEEECTTTCCTTCEEE
T ss_pred cCCCCCceEEEecC-CeEEEEECCCccccccchhccCceEEEEEEccCC-CChhheeeecccceEEEechhhcCCCCeEE
Confidence 34555567776655 699999999864321 24678999999876 55643332 123556666 999999999
Q ss_pred EEEEEEecCc---cCCCccccceEEecCCCCcccccccccceecccCCCCCCceEEEEecCCccEEEEeccccCcceEEE
Q psy7040 125 FRVKALNKEG---ESEPLETFSSIIARDPYSKYTSVSSLDSHKRSNQPCGSGMVRKVQHLDYNTKLGVRMAQRADAGFYT 201 (716)
Q Consensus 125 ~~v~a~~~~g---~~~~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~G~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~ 201 (716)
++|+|.+..| .+.+|..+..+....+.
T Consensus 186 ~rVra~~~~g~~~~G~wS~WS~~~~~~t~~-------------------------------------------------- 215 (419)
T 2gys_A 186 ARVRTRLAPGSRLSGRPSKWSPEVCWDSQP-------------------------------------------------- 215 (419)
T ss_dssp EEEEEEECTTSSCCBCCCCCCCCEEEECCC--------------------------------------------------
T ss_pred EEEEEecCCCCCCCcccCCCCCceeeeccc--------------------------------------------------
Confidence 9999999643 35555443332221110
Q ss_pred EEEEeCCCCceeEEEEEEecCCCCCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCCC------CCeEEccc
Q psy7040 202 VTAENINGKDSVEVEVIVLDKPSPPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEAT------GRWTPAGE 275 (716)
Q Consensus 202 c~a~n~~g~~~~~~~~~v~~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~------~~~~~~~~ 275 (716)
..|.+|.+ +.+.......+.+.|+++....+ ...|.|.|+.... ..+..+..
T Consensus 216 -------------------~~~~~p~~-l~c~~~~~~~l~c~W~~~~~~~~--~~~y~l~y~~~~~~g~~~~~~~~~C~~ 273 (419)
T 2gys_A 216 -------------------GDEAQPQN-LECFFDGAAVLSCSWEVRKEVAS--SVSFGLFYKPSPDAGSAVLLREEECSP 273 (419)
T ss_dssp -------------------CCTTSCEE-EEEEECSSSEEEEEEEEEHHHHT--TCCEEEEEECC-----CCCCCCEECCC
T ss_pred -------------------cccCCCce-EEEEECCceEEEeEEECCCCCCC--ceeEEEEEEecCccccccCcccccCCC
Confidence 12445555 66666677889999996421111 2459888875532 11333322
Q ss_pred cCc---------ccceEEEcCCCCCCeEEEEEEEEcCCCCCCCCcccceEEecCCCCCCCCCCCcEEEeeeCCeEEEEec
Q psy7040 276 TEG---------PVTGLEVEGLIPNHKYKFRVRAVNKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDFDTDFVELAWT 346 (716)
Q Consensus 276 ~~~---------~~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~ 346 (716)
... ....+.+.+|.+.+.|.++|.|.+..+.-.+ ... ..|.+| .+.+.. ..+.+.|+|.
T Consensus 274 ~~~~~~~~~~~~~~c~~~~~~l~~~~~y~i~V~a~~~~~~~~~---~~~-------v~p~PP-~l~v~~-~~~~l~l~W~ 341 (419)
T 2gys_A 274 VLREGLGSLHTRHHCQIPVPDPATHGQYIVSVQPRRAEKHIKS---SVN-------IQMAPP-SLQVTK-DGDSYSLRWE 341 (419)
T ss_dssp EEEECCTTTEEEEEEEEECSCTTTCCEEEEEEEECCCCEEEEG---GGS-------BCCCCC-EEEEC----CCCEEEEE
T ss_pred cccccCCCcceeEEeEEECccCCccCEEEEEEEEccCCccccc---eEE-------EEECCC-CeEEEE-eCCeEEEEEC
Confidence 111 1336778889999999999998754431110 100 124455 455554 4788999999
Q ss_pred CCCCCCCccceEEEEEEeecCCCceEEE--eeecCCCCeEEecCCCCCCeEEEEEEEEeCCC--CCCCCCCCCceE
Q psy7040 347 PPEQNGGSPIVGYIIEKKEKYSPIWEKC--AQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGG--PGEPSDPTAPHI 418 (716)
Q Consensus 347 ~p~~~~~~~i~~y~v~~~~~~~~~~~~~--~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g--~~~~s~~~~~~~ 418 (716)
+|....+..+.+|.|.|+..+ ..|... .... ...++.|.+|.|++.|.|+|+|.+..| .|.+|+.+..+.
T Consensus 342 ~P~~~~~~~~l~Yev~y~~~~-~~w~~~~~~~~~-~~~~~~l~~L~p~t~Y~~qVRa~~~~g~~~G~wS~WS~~~~ 415 (419)
T 2gys_A 342 TMKMRYEHIDHTFEIQYRKDT-ATWKDSKTETLQ-NAHSMALPALEPSTRYWARVRVRTSRTGYNGIWSEWSEARS 415 (419)
T ss_dssp C--------CEEEEEEEECSS-SCSTTSCEEEEE-SCSEEECCCCCSSCCCEEEEEEEECCTTCCBCCCCCCCCEE
T ss_pred CCcccccccceEEEEEEEcCC-CCcceeeccccc-cccEEEeccCCCCCeEEEEEEEEEcCCCCCCccCCCCCCeE
Confidence 985422224779999999876 334311 1112 568899999999999999999999874 466666655443
No 88
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.74 E-value=2.8e-15 Score=159.10 Aligned_cols=402 Identities=11% Similarity=0.036 Sum_probs=210.2
Q ss_pred ceEEEEecCCccEEEEeccccCcceEEEEEEEeCCCC---ceeEEEEEEecCCC-CCC---CCeEEeEEeCCeEEEEEEC
Q psy7040 174 MVRKVQHLDYNTKLGVRMAQRADAGFYTVTAENINGK---DSVEVEVIVLDKPS-PPG---GPLKVSNVHAEGVTLDWKV 246 (716)
Q Consensus 174 ~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~---~~~~~~~~v~~~p~-~p~---~~~~~~~~~~~~~~l~W~~ 246 (716)
+|+.....+....|.|.+++..|+|.|+|.|.|..|. ....+.|.|...+. +|. .+.......+..+.|.|..
T Consensus 59 ~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~g~~v~l~C~~ 138 (523)
T 2rcj_C 59 TRFSGSKSGTSASLAISGLEAEDESDYYCASWNSSDNSYVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLI 138 (523)
T ss_pred CcEEEecCCCEEEEEECCCChhhCEEEEEEEccCCCccccccCceEEEeccCCCcCCeEEecCCcccccCCCceEEEEEe
Confidence 3455444455678999999999999999999998874 23456777754332 221 1111223346789999986
Q ss_pred CCCCCCCccceEEEEEEeCCCCC---eEEc-cc--cCcc---cceEEEcCCCCCCeEEEEEEEEcCCCCCCCCcccceEE
Q psy7040 247 PDDDGGQPIEKYVVDKMDEATGR---WTPA-GE--TEGP---VTGLEVEGLIPNHKYKFRVRAVNKQGKSEPLTTTASIE 317 (716)
Q Consensus 247 p~~~~~~~~~~y~v~~~~~~~~~---~~~~-~~--~~~~---~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~~~~~~~~~ 317 (716)
... +.....+.|...+... .... .. ..+. ...+.|.++...+.+.|+|.|.|..|........ ..
T Consensus 139 ~g~----~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~--~~ 212 (523)
T 2rcj_C 139 SDF----YPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAP--TE 212 (523)
T ss_pred ccc----cCCceEEEEecCCCCCCCceEeccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCcccccceee--ee
Confidence 322 1111123332222110 0000 00 0010 1368899999999999999999987743221110 00
Q ss_pred ecCCCCCCC-CCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceE-EEe-eecCC-----CCeEEecCC
Q psy7040 318 AKNPFNQPG-KPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWE-KCA-QTEGD-----TPKGKVLDL 389 (716)
Q Consensus 318 ~~~~~~~p~-~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~-~~~-~~~~~-----~~~~~i~~l 389 (716)
.......|. .+.........+..+.|.|...... ..+ ..|.|...+...-. ... ..... ...+.|..+
T Consensus 213 ~~~~~~~P~v~~~~~~~~~~~G~~~~l~C~~~g~~-P~p---~~v~W~k~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~ 288 (523)
T 2rcj_C 213 CSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYF-PQP---VTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSS 288 (523)
T ss_pred cCCCCcCCEEEecCCCcccccCCceEEEEEEecee-CCC---eEEEEecCCcccceEeCCcEecCCCcEEEEEEEEechh
Confidence 000001110 0000000112345566666542110 001 12233222211000 000 00001 236788888
Q ss_pred CCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccE-EEecCCeEEEEEEEeccCC----CeEEEEeCC
Q psy7040 390 IEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDI-KVRAGSNFEFDINVIGEPI----PTKEWLCND 464 (716)
Q Consensus 390 ~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~-~~~~g~~~~~~~~v~~~p~----~~~~W~~~~ 464 (716)
...+ ..|+|.|.|..|......... ....|.+....+... .+..|..+.|.|.+.+.++ +.+.|++++
T Consensus 289 ~~~d-G~Y~C~a~n~~g~~~~~~~l~------v~~~P~~~~~~p~~~~~v~~g~~~~l~C~~~g~~p~~~~~~v~W~k~g 361 (523)
T 2rcj_C 289 SLGT-QTYICNVNHKPSNTKVDKRVE------PLSLPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPQVKFNWYVDG 361 (523)
T ss_pred hcCC-ceEEEEEEeCCCCcceEEecC------CCcCceEEecCCCchhhcccCCceEEEEEEecccCCCCceEEEEEECC
Confidence 8888 999999999988643221111 111233322222222 2678999999999998654 489999999
Q ss_pred eEeccCCcEEEEeC-CC----eEEEEECCCCCCCceeEEEEEEcCCCceeeEEEEEE----E---EEEEEEeCCC-CCCC
Q psy7040 465 ITIISKDRFKIVND-DK----STKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTV----L---GCSLKWNPPE-DDGG 531 (716)
Q Consensus 465 ~~~~~~~~~~~~~~-~~----~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v----~---~v~l~W~~p~-~~~~ 531 (716)
..+........... .. ...|.|.++..+|.|.|+|.|.|..+.......+.+ . .+.+.-.... ..++
T Consensus 362 ~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~P~v~~~~~~~~~~~~~ 441 (523)
T 2rcj_C 362 VQVHNAKTKPREQQYNSTYRVVSVLTVLHQNWLDGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSREEMTKN 441 (523)
T ss_pred eEccCCccCCceecCCCcEEEEEEEEECHHHhcCCCeEEEEEeCCCCCCceeEEEEcccCCCCCCEEEEeCCChHHccCC
Confidence 88765443221111 11 235889999999999999999998887665544442 1 2222211110 1123
Q ss_pred CceeeEEEEEEecCCCceeeeEEEccceeeeecc----cccee------EEEEcCCCCCCeEEEEEEEEcCCC
Q psy7040 532 APIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDN----VDYFT------KITIRPLQRSDTAQYTVTATNSQG 594 (716)
Q Consensus 532 ~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~----~~~~~------~~~i~~L~~~~~y~~~v~a~n~~G 594 (716)
.....|.+...+.. ...+.|++.+........ ..... .+.+......+.+.|.|.|.|...
T Consensus 442 ~~~l~C~~~g~~p~--~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~~~~l~v~~~~~~~~g~Y~C~a~n~~l 512 (523)
T 2rcj_C 442 QVSLTCLVKGFYPS--DIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEAL 512 (523)
T ss_pred ceEEEEEEEeeECC--CCEEEEEECCEECCCeeeccceeCCCCCEEEEEEEEEChHHccCCCeEEEEEEcCCc
Confidence 33455665543332 124899998765431110 01111 122333333557899999999664
No 89
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.74 E-value=1e-16 Score=163.87 Aligned_cols=308 Identities=17% Similarity=0.124 Sum_probs=189.8
Q ss_pred CccEEEEeccccCcceEEEEEEEeCCCCce-eEEEEEEecCCCCCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEE
Q psy7040 183 YNTKLGVRMAQRADAGFYTVTAENINGKDS-VEVEVIVLDKPSPPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVD 261 (716)
Q Consensus 183 ~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~-~~~~~~v~~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~ 261 (716)
.+.+|.|.+++..|+|.|+|.|.|..|... ..+.+.+...+.++..+.......++.+.|.|..+. +.+...+.+.
T Consensus 60 ~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~p~~~~~~~~~~~G~~v~l~C~~~~---~~p~~~v~W~ 136 (395)
T 1bih_A 60 DEGSLVFLRPQASDEGHYQCFAETPAGVASSRVISFRKTYLIASPAKTHEKTPIEGRPFQLDCVLPN---AYPKPLITWK 136 (395)
T ss_dssp TSCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEEEECCCCEEEEECCBTTEEEEECCCCCE---EESCCEEEEE
T ss_pred CCceEEEecCCCCCCcEEEEEEEeCCCeEEeEEEEEEEEEeecCCcCCcceeeeeCCcEEEEecCCC---CCCCCeEEEE
Confidence 456899999999999999999999988743 345555544443333323344456788999998421 2223334333
Q ss_pred EEeCC----------CCCeEEccccCcccceEEEcCCCCCCeE---EEEEEEEcCCCCCCCCcccceEEecCCCCCC---
Q psy7040 262 KMDEA----------TGRWTPAGETEGPVTGLEVEGLIPNHKY---KFRVRAVNKQGKSEPLTTTASIEAKNPFNQP--- 325 (716)
Q Consensus 262 ~~~~~----------~~~~~~~~~~~~~~~~~~i~~L~p~~~y---~~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p--- 325 (716)
..... ..... . .....+.|.++...+.+ .|+|.|.|..|..........+........+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~-~----~~~~~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (395)
T 1bih_A 137 KRLSGADPNADVTDFDRRIT-A----GPDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKG 211 (395)
T ss_dssp EEETTSCGGGCCCCCCTTEE-E----CTTSCEEEEEECGGGCCSSEEEEEEEECTTCSSCEEEEEEEECCCBCCSSCCCC
T ss_pred ecCCCcCcccccccccccEE-E----cCCCcEEEEEEeeccCCCceEEEEEEEecccceEEEeeeEEecccccccccccC
Confidence 33200 11111 1 12347889999988888 9999999988764322111111100000000
Q ss_pred -CC----CCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCC-----CceEEEeeecCCCCeEEecCCCCCCeE
Q psy7040 326 -GK----PGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYS-----PIWEKCAQTEGDTPKGKVLDLIEGNQY 395 (716)
Q Consensus 326 -~~----p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~-----~~~~~~~~~~~~~~~~~i~~l~~~~~Y 395 (716)
.. +.. .....+..+.|.|.....+.. .+. |...+. ...............+.|.++...+.+
T Consensus 212 ~~~p~~~~~~--~~~~~G~~v~l~C~~~g~p~~-~i~-----W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 283 (395)
T 1bih_A 212 EPVPQYVSKD--MMAKAGDVTMIYCMYGSNPMG-YPN-----YFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEG 283 (395)
T ss_dssp CCEEEEECCS--EEEETTSCEEEEEEEECSSCC-CCE-----EEETTEECCCCTTSSEESCSSSTTSEEEESSCCGGGCE
T ss_pred CcCceecCCc--eEEECCCcEEEEEEeccCCCC-eEE-----EEECCEEcCCCCceeEEEEecCCCceEEEccCChhhCE
Confidence 00 112 223345667888865221111 122 222210 000000111123347999999999999
Q ss_pred EEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEE
Q psy7040 396 EFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKI 475 (716)
Q Consensus 396 ~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~ 475 (716)
.|+|.|.|..|....... ...+ ..+|.+.........+..|+.+.|.|.+.+.|.+.+.|++++..+... ++.+
T Consensus 284 ~Y~C~a~n~~g~~~~~~~--~l~V---~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~-~~~~ 357 (395)
T 1bih_A 284 VYTCEVDNGVGKPQKHSL--KLTV---VSAPKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPLSGG-RATV 357 (395)
T ss_dssp EEEEEECCSSSSCEEEEE--EEEE---EEEEEEEECCCSEEEECTTSCEEEECEEEEESCCCCEEEETTEECCSS-SEEE
T ss_pred EEEEEEEeCCCCceEEEE--EEEE---EcCCccccCCCcceEecCCCeEEEEEEECcccCCeeEEEECCEECCCC-ceEE
Confidence 999999998875422111 1111 125555433333378899999999999999999999999999988654 4444
Q ss_pred EeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEEEEEE
Q psy7040 476 VNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTV 516 (716)
Q Consensus 476 ~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v 516 (716)
.. . .|.|.++...|.|.|+|.|.|..|....++.+.|
T Consensus 358 ~~--~--~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~V 394 (395)
T 1bih_A 358 TD--S--GLVIKGVKNGDKGYYGCRATNEHGDKYFETLVQV 394 (395)
T ss_dssp ET--T--EEEESSCCSTTCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EC--C--EEEEeeCCcccCEEEEEEEEccCCCceEEEEEEE
Confidence 32 2 8999999999999999999999999988887765
No 90
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.74 E-value=1.5e-16 Score=161.62 Aligned_cols=305 Identities=17% Similarity=0.167 Sum_probs=193.3
Q ss_pred ccEEEEecccc-CcceEEEEEEEeCCCCc-eeEEEEEEecCCCCCCC-CeEEeEEeCCeEEEEEECCCCCCCCccceEEE
Q psy7040 184 NTKLGVRMAQR-ADAGFYTVTAENINGKD-SVEVEVIVLDKPSPPGG-PLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVV 260 (716)
Q Consensus 184 ~~~l~i~~l~~-~~~g~y~c~a~n~~g~~-~~~~~~~v~~~p~~p~~-~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v 260 (716)
+..|.|.++.. .|+|.|+|.|.|..|.. +..+.+.+...|..+.. +-.+....+..+.|.|..+.. .+...+.+
T Consensus 60 ~~~L~i~~~~~~~D~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~---~p~~~i~W 136 (382)
T 1cs6_A 60 AGDLVISNPVKAKDAGSYQCVATNARGTVVSREASLRFGFLQEFSAEERDPVKITEGWGVMFTCSPPPH---YPALSYRW 136 (382)
T ss_dssp TTEEEEESCCHHHHCEEEEEEEEETTEEEECCCEEEEEEEECCCCSSCCCCEEEETTSCEEECCCCCSE---ESCCEEEE
T ss_pred CCeEEEecccccccCEEEEEEEEcCCcEEEecceEEEeeccccccccCCCceEEecCCcEEEEeCCCCC---CCCcEEEE
Confidence 45899999997 99999999999998874 33566666554433221 123455578899999985321 12233333
Q ss_pred EEEeCC-----CCCeEEccccCcccceEEEcCCCCCCeEEEEEEEEcCCCCCCCCccc--ceEEecCCCC---CCC----
Q psy7040 261 DKMDEA-----TGRWTPAGETEGPVTGLEVEGLIPNHKYKFRVRAVNKQGKSEPLTTT--ASIEAKNPFN---QPG---- 326 (716)
Q Consensus 261 ~~~~~~-----~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~~~~~--~~~~~~~~~~---~p~---- 326 (716)
...... ...... ......+.|.++...+.+.|+|.|.|..|.......+ ..+.+..... .|.
T Consensus 137 ~~~~~~~~~~~~~~~~~----~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~~~~~~~P~~~~~ 212 (382)
T 1cs6_A 137 LLNEFPNFIPADGRRFV----SQTTGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKAK 212 (382)
T ss_dssp EESSTTCBCCCCSSEEE----CTTTCCEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCCCEEEEEEEC
T ss_pred EECCCccccccCceEEE----ecCceEEEEEeeCcccCeeEEEEEEEccccccceeEccceeeccchhhcccCCCceecc
Confidence 322111 011110 1234689999999999999999999977543221111 1111111000 110
Q ss_pred CCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEEeCCC
Q psy7040 327 KPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGG 406 (716)
Q Consensus 327 ~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g 406 (716)
.|. ......+..+.|.|..... +.. .+.|...+.... .........+.|.++...+.+.|+|.|.|..|
T Consensus 213 ~~~--~~~~~~G~~v~l~C~~~g~----p~~--~i~W~~~~~~~~---~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g 281 (382)
T 1cs6_A 213 FPA--DTYALTGQMVTLECFAFGN----PVP--QIKWRKLDGSQT---SKWLSSEPLLHIQNVDFEDEGTYECEAENIKG 281 (382)
T ss_dssp CCS--EEEEETTCCEEEECEEEEE----SCC--EEEEEECCSCCS---CCCSBSSSEEEECSCCGGGCEEEEEEEEETTE
T ss_pred CCC--ceEEeCCCeEEEEEEEccC----CCC--EEEEEECCcccc---cEEecCCcEEEEccCChhhCEEEEEEEEcCCC
Confidence 111 2233456677888765211 111 233332221100 01223566799999999999999999999887
Q ss_pred CCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEE
Q psy7040 407 PGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKV 486 (716)
Q Consensus 407 ~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i 486 (716)
....+. ...+. .+|.+.. .+....+..|+.+.|.|.+.+.|.+.+.|++++..+....++.+.. ..|.|
T Consensus 282 ~~~~~~---~l~V~---~~p~~~~-~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~----~~L~i 350 (382)
T 1cs6_A 282 RDTYQG---RIIIH---AQPDWLD-VITDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQNRIEVSG----GELRF 350 (382)
T ss_dssp EEEEEE---EEEEE---EEEEEEE-CCCCEEEETTCCEEEECEEEEESCCEEEEEETTEECCCCSSEEEET----TEEEE
T ss_pred eEEEEE---EEEEe---cCCCccc-CCCccEEcCCCeEEEEEEeeeecCCEEEEEECCEECCCCceEEEEC----CEEEE
Confidence 632111 11111 2344332 2345778999999999999999999999999999988777766542 37999
Q ss_pred CCCCCCCceeEEEEEEcCCCceeeEEEEEEE
Q psy7040 487 FDSKRGDSGIYTLAVKNSWGTDKGTAKVTVL 517 (716)
Q Consensus 487 ~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v~ 517 (716)
.++...|.|.|+|.|.|..|....++.+.|.
T Consensus 351 ~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 381 (382)
T 1cs6_A 351 SKLVLEDSGMYQCVAENKHGTVYASAELTVQ 381 (382)
T ss_dssp SSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CcCCcccCEEEEEEEEeCCCeEEEEEEEEEe
Confidence 9999999999999999999999888887764
No 91
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.74 E-value=2.8e-16 Score=154.65 Aligned_cols=252 Identities=13% Similarity=0.124 Sum_probs=161.4
Q ss_pred ccEEEecCCeEEEEEEEeccCCC-----eEEEEeCCeEe-------------ccCCcEEEEeC-----CCeEEEEECCCC
Q psy7040 434 SDIKVRAGSNFEFDINVIGEPIP-----TKEWLCNDITI-------------ISKDRFKIVND-----DKSTKLKVFDSK 490 (716)
Q Consensus 434 ~~~~~~~g~~~~~~~~v~~~p~~-----~~~W~~~~~~~-------------~~~~~~~~~~~-----~~~~~l~i~~l~ 490 (716)
..+.+..|+.+.|.|.+.+.+.+ .+.|++++... ....++.+... ....+|.|.++.
T Consensus 8 ~~v~~~~G~~v~L~C~v~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~ 87 (313)
T 4fqp_A 8 TQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLR 87 (313)
T ss_dssp SEECCBTTSCEEECCEEECCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEEECSCC
T ss_pred CEEEEecCCCEEEEEEEECCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEEECcCC
Confidence 34667789999999999887766 48999987532 12223333211 134579999999
Q ss_pred CCCceeEEEEEEc-CCCceeeEEEEEEE---EEEEEEeCCCCCCCC-ceeeEEEEEEecCCCceeeeEEEccceeeeecc
Q psy7040 491 RGDSGIYTLAVKN-SWGTDKGTAKVTVL---GCSLKWNPPEDDGGA-PIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDN 565 (716)
Q Consensus 491 ~~~~~~y~~~a~n-~~g~~~~s~~~~v~---~v~l~W~~p~~~~~~-~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~ 565 (716)
..|.|.|+|.+.+ ..|..+..+.+.+. .+...-.......+. ....|... ...+.+.+.|++.+........
T Consensus 88 ~~D~G~Y~C~v~~~~~~~~~~~~~l~v~~~P~~~~~~~~~~~~~~~~~~~~C~~~---~~~P~~~i~W~~~~~~~~~~~~ 164 (313)
T 4fqp_A 88 VEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPMARCVST---GGRPPAQITWHSDLGGMPNTSQ 164 (313)
T ss_dssp GGGCEEEEEEEECSSSCEEEEEEEECCBBCCEEEEEECCBCCCSSCEEEEEEEEE---EEBSCCEEEEEETTCCEEEEEE
T ss_pred hhhCEEEEEEEeeccCcceeeeeeeeeccCCcceecccceEeecCceEEEEEEcc---CccCCcEEEeecCCccccccce
Confidence 9999999999865 44555555555444 333333322222222 12223222 1223445999988765432211
Q ss_pred ----ccc----eeEEEEcCCCCCCeEEEEEEEEcCCCCCccceeee--ccCCCCC----CccceeeccceeEEEEEEeeE
Q psy7040 566 ----VDY----FTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVV--VTDKPSA----PEGPIQWLLTLTDVTWEISNY 631 (716)
Q Consensus 566 ----~~~----~~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~~~~--v~~~p~~----~~~~~~~~~~~v~l~w~i~~y 631 (716)
... ...+.+......+.+.|+|.|.|..|.......+. |..+|.. +.......+..+.
T Consensus 165 ~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~v~~~~~~~~~~~~g~~v~-------- 236 (313)
T 4fqp_A 165 VPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVYYPPEVSISGYDNNWYLGQNEAT-------- 236 (313)
T ss_dssp EECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBCEEEEEEEECCCSCEETTCCCEE--------
T ss_pred eeeecccccccceeeeecccccccCeeEEEEEEccCcCccceeeeecccccCCccccccccceeecCCCeEE--------
Confidence 111 13477777778888999999999888776655444 4444431 0001111233344
Q ss_pred EEEeeeeccCcee-----eEEEEeCCeEeeecccceeeEEEEccCCCCCcEEEEEEEEcCCCCceeeEEEEEecCC
Q psy7040 632 LQELHSSLMPISL-----ESQYLMNDKRVTIDNVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTDKP 702 (716)
Q Consensus 632 ~v~~~~~~~~~~~-----~~~W~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~y~~~a~n~~G~~~~s~~l~v~~~p 702 (716)
|.|.+.| .+.|+++|..+..........|.|.++...|+|.|+|.|.|..|....+..|.|..+|
T Consensus 237 ------l~C~~~g~P~p~~v~W~~~~~~l~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P 306 (313)
T 4fqp_A 237 ------LTCDARSNPEPTGYNWSTTMGPLPPFAVAQGAQLLIRPVDKPINTTLICNVTNALGARQAELTVQVKEGP 306 (313)
T ss_dssp ------EEEEEEEESCCCEEEEEETTBSCCTTEEEETTEEEECCCSSCCEEEEEEEEECSSCEEEEEEEEEEECCC
T ss_pred ------EEEEecCCCCCcEEEEEECCEECCCceEEeCCEEEECcCChhhCEEEEEEEEeCCCcEEEEEEEEEEeCC
Confidence 5555555 5899999988765533344689999999999999999999999999999999998753
No 92
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=99.73 E-value=5.4e-17 Score=166.33 Aligned_cols=219 Identities=16% Similarity=0.124 Sum_probs=143.9
Q ss_pred CCCeEEEEEEEEcCCCCCCCCcccceEEecCCCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCC-
Q psy7040 290 PNHKYKFRVRAVNKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYS- 368 (716)
Q Consensus 290 p~~~y~~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~- 368 (716)
....+.+.|.|.|..+...........+ .+|.+|.++.. .++.+++.|+|.+|...++.++.+|.|+++..+.
T Consensus 304 s~~~Gs~~C~C~ng~~ra~~d~~~~~ct-----~pPsaP~nl~~-~vs~tSv~LsW~pP~~~gG~~i~~Y~V~~~~~~~~ 377 (536)
T 3fl7_A 304 PSPEGATSCECEEGFFRAPQDPASMPCT-----RPPSAPHYLTA-VGMGAKVELRWTPPQDSGGREDIVYSVTCEQCWPE 377 (536)
T ss_dssp CCCTTCSSCEECTTCBCCTTCCTTSCCB-----CCCCCBSCEEE-ECCTTSEEEEECCBSCCCSCSCCEEEEEEEEECC-
T ss_pred CCCCCccEEEEeccccccCCCccccccc-----cCCCcccceEE-EecCCEEEEEEeCCcCCCCCceeEEEEEEEeccCC
Confidence 4455677899999888765444432222 46889999854 6889999999999887777689999999986421
Q ss_pred -CceEEE--------eeecCCCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEe
Q psy7040 369 -PIWEKC--------AQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVR 439 (716)
Q Consensus 369 -~~~~~~--------~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~ 439 (716)
..|... ........+++|.+|.|++.|.|+|+|.|..|.+.++.....+.....+.+|..
T Consensus 378 ~~~~~~c~~~~~~~~~~~~~~~ts~tI~gL~P~T~Y~frV~A~N~~G~~sps~~s~~v~v~T~~~~Ps~----------- 446 (536)
T 3fl7_A 378 SGECGPCEASVRYSEPPHGLTRTSVTVSDLEPHMNYTFTVEARNGVSGLVTSRSFRTASVSINQTEPPK----------- 446 (536)
T ss_dssp CCCEEECCTTCEESSCSSSBCSSEEEEECCCTTCEEEEEEEEECTTGGGCSCCCEEEEEEECCSCCCCE-----------
T ss_pred CCcccccCCCceEEEeecCCccceeEeCCCCCCCEEEEEEEEEecCCCCCCCCccceeEEeecccCCCC-----------
Confidence 122111 112346789999999999999999999999887543222222222222222220
Q ss_pred cCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEEEEEEEEE
Q psy7040 440 AGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVLGC 519 (716)
Q Consensus 440 ~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v~~v 519 (716)
+.+...... ++
T Consensus 447 --------------------------------------------~~~~~~s~t-------------------------SV 457 (536)
T 3fl7_A 447 --------------------------------------------VRLEGRSTT-------------------------SL 457 (536)
T ss_dssp --------------------------------------------EEEEECCC--------------------------CC
T ss_pred --------------------------------------------CceeeccCC-------------------------eE
Confidence 000000011 89
Q ss_pred EEEEeCCCCCCCCceeeEEEEEEecCCCceeeeEEEccceeeeeccccceeEEEEcCCCCCCeEEEEEEEEcCCCCCccc
Q psy7040 520 SLKWNPPEDDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDNVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVF 599 (716)
Q Consensus 520 ~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s 599 (716)
.|+|++|...+ +.+.+|.|+|...... ..+.... .....+.|.+|+|++.|.|+|+|.|..|.|+.+
T Consensus 458 ~LsW~pP~~~n-g~I~~Y~V~y~~~~~~---~~~~~v~---------~~~ts~~l~gL~P~T~Y~frVrA~n~~G~Gp~S 524 (536)
T 3fl7_A 458 SVSWSIPPPQQ-SRVWKYEVTYRKKGDS---NSYNVRR---------TEGFSVTLDDLAPDTTYLVQVQALTQEGQGAGS 524 (536)
T ss_dssp EEEEECCTTTT-TTCSEEEEEEEEC--C---CCCEEEE---------ESSSEEECCSCCSSCEEEEEEEEECC---CEEC
T ss_pred EEEEECCcCCC-CcccEEEEEEEECCCC---ceEEEEc---------CCCCEEEECCCCCCCEEEEEEEEEcCCcccCCC
Confidence 99999986544 5599999999987641 1111111 113889999999999999999999999999998
Q ss_pred eeeeccCC
Q psy7040 600 IEVVVTDK 607 (716)
Q Consensus 600 ~~~~v~~~ 607 (716)
..+.+...
T Consensus 525 ~~v~~~T~ 532 (536)
T 3fl7_A 525 KVHEFQTL 532 (536)
T ss_dssp CCEEEECC
T ss_pred CCEEEEeC
Confidence 87775443
No 93
>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens}
Probab=99.73 E-value=1.9e-15 Score=152.54 Aligned_cols=363 Identities=15% Similarity=0.098 Sum_probs=219.6
Q ss_pred CCCcceeeEEEEEccC-CCC--CCCceEEEEeC-CeEEEEecCCCCCC-CCccceEEEEEEcCCCCcE--EEecccC---
Q psy7040 39 DGGEPLEGYLVEKDRG-LDP--EGPLEVSNIHK-DGCTLKWNKPKDDG-GEPLEGYLVEKYDPETGVW--IPVGKTR--- 108 (716)
Q Consensus 39 ~~~~~~~~y~~~~~~~-~~p--~~~l~~~~~~~-~s~~l~W~~p~~~~-~~~i~~y~v~~~~~~~~~~--~~~~~~~--- 108 (716)
+.|.....|++....- +.| |.-|.+..... ..+.|+|......- ...-..|+|+........- .......
T Consensus 66 ~~~~~~~~~~~~~~~~~~~p~~p~~l~~~~~~~~~~l~~~w~~~~~~~~~~~~~~~~i~i~r~~~~~~v~~~~~~~~~~~ 145 (483)
T 3e0g_A 66 DFGSSTSKFTLNEQNVSLIPDTPEILQLSADFSTSTLYLKWNDRGSVFPHRSNVIWEIKVLRKESMELVKLVTHQTTLNG 145 (483)
T ss_dssp CC----CCCEECCSCCEECCCCCCBCCCEEETTTTEEEEEEEECGGGCCSCCEEEEEEEEESSSSCEEEEEEEEEECGGG
T ss_pred CCCCCceeEEEEcccceeccCCCceEEEEecCCCcEEEEEEeCCCCCCCcccceEEEEEEEEcCCccEEEEEEEEEEecC
Confidence 3444567776666653 334 34477776655 79999998642110 0124568888876654432 2211111
Q ss_pred -CCeE---EecCC-CCCcEEEEEEEEE-ec---Cc---cCCCccccceEEecC-------CCCcccccccc--cceeccc
Q psy7040 109 -EPEM---DVTGL-TPGHEYKFRVKAL-NK---EG---ESEPLETFSSIIARD-------PYSKYTSVSSL--DSHKRSN 167 (716)
Q Consensus 109 -~~~~---~i~~L-~~~~~y~~~v~a~-~~---~g---~~~~s~~~~~~~~~~-------p~~~~~~~~~~--~~~~~~~ 167 (716)
+..+ --.+| .+++.+.+|||+. ++ .| +|.+|..... .... |.......+.. ..|.+.-
T Consensus 146 ~~~~~~w~w~s~~plec~~h~v~iR~~~~~~~~~~~~~ws~Ws~~~~~-~~~~~~~~~ifP~~~vv~~GS~vt~~Ci~~~ 224 (483)
T 3e0g_A 146 KDTLHHWSWASDMPLECAIHFVEIRCYIDNLHFSGLEEWSDWSPVKQI-SWIPDSQTKVFPQDKVILVGSDITFCCVSQE 224 (483)
T ss_dssp CCEEEEEEEECSSCTTSSCEEEEEEEEEECTTCCSEECCCCCCCCEEE-CCCCCSSCCEESCSEEEETTCCEEEEECCSS
T ss_pred CCceEEEEecCCCCCCCCccEEEEEEEecccccCCCCCCcCCCChhhc-cccCCCCcEEeccCCEEeCCCCEEEEEEeCc
Confidence 1111 12234 5789999999998 33 34 3444432222 0011 11111112211 2243331
Q ss_pred CCC----CCCceEEEEecCCccEEEEeccccC--cceEEEEEEEeCCCCceeEEEEEEecCCCCCCCCeEEeEEeCCeEE
Q psy7040 168 QPC----GSGMVRKVQHLDYNTKLGVRMAQRA--DAGFYTVTAENINGKDSVEVEVIVLDKPSPPGGPLKVSNVHAEGVT 241 (716)
Q Consensus 168 ~p~----G~~~~~~~~~~~~~~~l~i~~l~~~--~~g~y~c~a~n~~g~~~~~~~~~v~~~p~~p~~~~~~~~~~~~~~~ 241 (716)
.-. +...............++|.++... ..-.|.|... .....+.+.+..+|.+|.+ +.........++
T Consensus 225 ~~~~~~l~~~~~~~~~l~~~~~~i~v~nl~~~~~sg~n~~C~~~----~~~~g~~l~vg~PP~~P~n-lsC~s~~~~slt 299 (483)
T 3e0g_A 225 KVLSALIGHTNCPLIHLDGENVAIKIRNISVSASSGTNVVFTTE----DNIFGTVIFAGYPPDTPQQ-LNCETHDLKEII 299 (483)
T ss_dssp CEEEEESSSCCBCCEECSSSCEEEEECSCCCCCSSCEEEEEEES----SCEEEEEEEEECCCCCCEE-EEEEBSSTTEEE
T ss_pred cccceecCcccceeEEecCCEEEEEEeCCCCccCccceEEEecC----CcccceEEECcCCCCCCCc-cEEEecCCCEEE
Confidence 100 1122222234555778888888762 3456888752 2455667888899999988 788777778999
Q ss_pred EEEECCCCCC--CCccceEEEEEEeCCCCCeEEcccc---CcccceEEEcCCCCCCeEEEEEEEEcCCCCCCCCcccceE
Q psy7040 242 LDWKVPDDDG--GQPIEKYVVDKMDEATGRWTPAGET---EGPVTGLEVEGLIPNHKYKFRVRAVNKQGKSEPLTTTASI 316 (716)
Q Consensus 242 l~W~~p~~~~--~~~~~~y~v~~~~~~~~~~~~~~~~---~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~~~~~~~~ 316 (716)
++|+++.+.+ |.+.+.|.|.++..+ ....+... .+....+.+.+|.+.+.|.|+|.|.|..|.+... . .+
T Consensus 300 CsW~pg~dt~l~G~~~t~YtL~y~~~g--~~~~C~~~~~~~~~~~~C~~~~l~~~t~Y~f~V~A~N~lG~~~S~-~--~~ 374 (483)
T 3e0g_A 300 CSWNPGRVTALVGPRATSYTLVESFSG--KYVRLKRAEAPTNESYQLLFQMLPNQEIYNFTLNAHNPLGRSQST-I--LV 374 (483)
T ss_dssp EEEECCSCCSCCGGGCCEEEEEETTTC--CEEEECCCSSCSCSCEEEEEECCTTCCCEEEEEEEECSSCEEEEE-E--EE
T ss_pred EEECCCCcCCcCCCCCeeEEEEEEECC--CCccccCCcccCCCEEEEEEccCCCCcEEEEEEEEEeCCCCcccc-e--EE
Confidence 9999866542 445789999986542 22333321 1245678999999999999999999999876522 1 12
Q ss_pred EecCCCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCc-eEEEeeec--CCCCeEEecCCCCCC
Q psy7040 317 EAKNPFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPI-WEKCAQTE--GDTPKGKVLDLIEGN 393 (716)
Q Consensus 317 ~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~-~~~~~~~~--~~~~~~~i~~l~~~~ 393 (716)
.. .....|.+|.++.+.....+.+.|+|.+|... +..+..|+|+|+..+... |....... .....+.+.+|.|++
T Consensus 375 ~~-~~~VkP~PP~nl~v~~~~stsl~LsW~~P~~~-~~~~L~YeVrYr~~~~~~~~~~vsv~~~~~~~~s~~l~~L~PgT 452 (483)
T 3e0g_A 375 NI-TEKVYPHTPTSFKVKDINSTAVKLSWHLPGNF-AKINFLCEIEIKKSNSVQEQRNVTIQGVENSSYLVALDKLNPYT 452 (483)
T ss_dssp CG-GGGBCCCCCEEEEECCSSSSSCCEEEECCSCC-TTSBCCCEEEEECSSSCCCEEECCCBCCSSSBCCCCCCSCCSSS
T ss_pred Ee-ccccCCCCCeeeEEEEecCCeEEEEECCCCCC-CCceEEEEEEEEECCCCCceEEEEEeccCCceeEEEEeccCCCc
Confidence 21 23356889999998877889999999998643 335789999999876443 54322211 223467899999999
Q ss_pred eEEEEEEEEeCCCCCCCCCCCC
Q psy7040 394 QYEFRVLAVNKGGPGEPSDPTA 415 (716)
Q Consensus 394 ~Y~~~v~a~n~~g~~~~s~~~~ 415 (716)
.|.|+|+|. ..|.|.+++.+.
T Consensus 453 ~Y~vrVRA~-~~g~g~WSeWS~ 473 (483)
T 3e0g_A 453 LYTFRIRCS-TETFWKWSKWSN 473 (483)
T ss_dssp SCEEEEECC-CSSCCCCCCCCC
T ss_pred EEEEEEEEe-eCCCCCcCCCCC
Confidence 999999999 667655555443
No 94
>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A
Probab=99.73 E-value=1.9e-16 Score=145.95 Aligned_cols=194 Identities=11% Similarity=0.102 Sum_probs=139.1
Q ss_pred cCCCCCCCCeEEeEE-eCCeEEEEEECCCCCCCCccceEEEEEEeCCC------CCeEEcccc-CcccceEEEcCCCCCC
Q psy7040 221 DKPSPPGGPLKVSNV-HAEGVTLDWKVPDDDGGQPIEKYVVDKMDEAT------GRWTPAGET-EGPVTGLEVEGLIPNH 292 (716)
Q Consensus 221 ~~p~~p~~~~~~~~~-~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~------~~~~~~~~~-~~~~~~~~i~~L~p~~ 292 (716)
.+|.+|.+ +.+... ..+++.++|+++.+ ++. ...|.|.++.... ..+..+... ....+.+.+.+|.+++
T Consensus 3 ~pP~~P~~-l~c~~~~~~~~~~~~W~p~~~-~~~-~~~Y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~ 79 (215)
T 1cd9_B 3 YPPASPSN-LSCLMHLTTNSLVCQWEPGPE-THL-PTSFILKSFRSRADCQYQGDTIPDCVAKKRQNNCSIPRKNLLLYQ 79 (215)
T ss_dssp CCCCCCEE-EEEEEETTTTEEEEEEECCSC-CSS-CCEEEEEEEECCGGGCSCCCEEEEEECCTTCCEEEEEGGGCCTTS
T ss_pred CCCCCCee-eeeecCCCcccEEEEecCCCC-CCC-ceeEEEEEEecCCcccccccccccCCCCCCCcEEEECCcccccce
Confidence 36778877 777766 57899999997654 443 4679999876432 224444321 2244677888999999
Q ss_pred eEEEEEEEEcCCCCCCCCcccceEEecCCCCCCCCCCCcEEEee------eCCeEEEEecCCCCCCCccceEEEEEEe-e
Q psy7040 293 KYKFRVRAVNKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDF------DTDFVELAWTPPEQNGGSPIVGYIIEKK-E 365 (716)
Q Consensus 293 ~y~~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~------~~~~i~l~W~~p~~~~~~~i~~y~v~~~-~ 365 (716)
.|.|+|.|.|..|.+.. ... .........|.+|.++.+... ..+++.|+|.+|.. ++..+.+|.|+|+ .
T Consensus 80 ~Y~~~V~A~N~~G~~~s-~~~--~~~~~~~v~p~pP~~~~~~~~~~~~~~~~~~~~l~W~~p~~-~~~~~l~Y~v~y~~~ 155 (215)
T 1cd9_B 80 YMAIWVQAENMLGSSES-PKL--CLDPMDVVKLEPPMLQALDIGPDVVSHQPGCLWLSWKPWKP-SEYMEQECELRYQPQ 155 (215)
T ss_dssp CEEEEEEEEETTEEEEC-CCE--EECGGGGBCCCCCEEEECCC-------CCSCEEEEEECCGG-GTTSCEEEEEEEEES
T ss_pred EEEEEEEEECCCCCccC-ccE--EEchHHceEeCCCcEEEEEEeccccCCCCCeEEEEEeCCCC-CCeEEEEEEEEEccC
Confidence 99999999999886532 111 111112245788888887765 57889999999765 3434579999999 6
Q ss_pred cCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeec
Q psy7040 366 KYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARA 421 (716)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~ 421 (716)
.+...|............+.|.+|.|++.|.|+|+|.+..|.|.+|+.+..+...+
T Consensus 156 ~~~~~w~~~~~~~~~~~~~~l~~L~p~t~Y~~~Vra~~~~g~G~wS~wS~~~~~~T 211 (215)
T 1cd9_B 156 LKGANWTLVFHLPSSKDQFELCGLHQAPVYTLQMRCIRSSLPGFWSPWSPGLQLRP 211 (215)
T ss_dssp STTCCCEEEEEEESCEEEEEECCCCSCSCEEEEEEEEESSSCCCCCCCCCCEEECC
T ss_pred CCCCCcEEEecccCcceEEEEcCCCCCCEEEEEEEeeECCCCCCCcCCCCccceec
Confidence 66677876544445567899999999999999999999988888887776665543
No 95
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.73 E-value=4.4e-16 Score=158.85 Aligned_cols=247 Identities=10% Similarity=0.105 Sum_probs=152.6
Q ss_pred cEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEEEE
Q psy7040 435 DIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKV 514 (716)
Q Consensus 435 ~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~ 514 (716)
.+.+.+|+.+.|.|.+.+.|.+.+.|++++..+.....+.. .......|.|.++...|.|.|+|.|.|..|.....+.+
T Consensus 57 ~v~V~~G~~v~L~C~v~g~P~p~i~W~~~~~~l~~~~~~~~-~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l 135 (423)
T 3qs7_E 57 AVEVDVSASITLQVLVDAPGNISCLWVFKHSSLNCQPHFDL-QNRGVVSMVILKMTETQAGEYLLFIQSEATNYTILFTV 135 (423)
T ss_dssp EEEECSSCCEEEEEECSCCSSCEEEEEETTEEECCCCBC------CEEEEEESSCCSSSCSEEEEEEEC--CEEEEEEEE
T ss_pred cEEEecCCcEEEEEEEEcCCCCeEEEEECCCccCccceecc-ccceEEEEEEeecCcccCEEEEEEEEcCCCcEEEEEEE
Confidence 78899999999999999999999999999887654322110 11123479999999999999999999999987777666
Q ss_pred EEEEE-EEEEeCCC--CCCCCceeeEEEEEEecCCCceeeeEEEccceeeeeccccceeEEEE-cCCCCCCeEEEEEEEE
Q psy7040 515 TVLGC-SLKWNPPE--DDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDNVDYFTKITI-RPLQRSDTAQYTVTAT 590 (716)
Q Consensus 515 ~v~~v-~l~W~~p~--~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~i-~~L~~~~~y~~~v~a~ 590 (716)
.+... .+.-..|. ..++.....|.+... +.|.+.|++.+................. .-|...+.+.|+|.|.
T Consensus 136 ~V~~~p~~~~~~p~~~~~~~~~~L~C~a~G~----P~P~i~W~k~~~~~~~~~~~~~~~~~~~~~~l~~~d~G~Y~C~A~ 211 (423)
T 3qs7_E 136 SIRNTLLYTLRRPYFRKMENQDALVCISESV----PEPIVEWVLCDSQGESCKEESPAVVKKEEKVLHELFGTDIRCCAR 211 (423)
T ss_dssp EEC-----CEEEEEEEECSSSSCEEEEEEES----SCCEEEEEEC-------------CEEECCSEECCCCSSCEEEEEE
T ss_pred EEecCccccccCCcEeccCCceEEEEEEeee----cCCeEEEEECCCCCccccccccccccccceEEecccCeEEEEEEE
Confidence 66510 00000000 112222345555443 4455999987653311000000000000 1125678889999999
Q ss_pred cCCCCCccc-eeeeccCCCCCCcc-ceeeccceeEEEEEEeeEEEEeeeeccCcee-----eEEEEeCCeEeeecc----
Q psy7040 591 NSQGKDQVF-IEVVVTDKPSAPEG-PIQWLLTLTDVTWEISNYLQELHSSLMPISL-----ESQYLMNDKRVTIDN---- 659 (716)
Q Consensus 591 n~~G~~~~s-~~~~v~~~p~~~~~-~~~~~~~~v~l~w~i~~y~v~~~~~~~~~~~-----~~~W~~~~~~~~~~~---- 659 (716)
|..|..... ..+.|..+|..+.. .....+..+. |.|.+.| .+.|+++|..+....
T Consensus 212 N~~G~~~~~~~~l~V~~~p~~~~~~~~v~~G~~v~--------------L~C~~~g~~p~p~i~W~k~g~~l~~~~~~~~ 277 (423)
T 3qs7_E 212 NELGRECTRLFTIDLNQTPQTTLPQLFLKVGEPLW--------------IRCKAVHVNHGFGLTWELENKALEEGNYFEM 277 (423)
T ss_dssp CSSCEEEEECEEEESSSCCCSSTTEEEEETTSCEE--------------EEEEEEESSSCCCEEEEESSSBCCGGGEEEE
T ss_pred cCCCCcceeeEEEEEecCCccCCCceEEeCCCeEE--------------EEEEEEcCCCCcEEEEEECCEEccccceeec
Confidence 999865432 33446555543331 2222344454 5555554 689999998764421
Q ss_pred --------cceeeEEEEccCCCCCcEEEEEEEEcCCCCceeeEEEEEecCCC
Q psy7040 660 --------VDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTDKPS 703 (716)
Q Consensus 660 --------~~~~~~~~i~~l~~~~~y~y~~~a~n~~G~~~~s~~l~v~~~p~ 703 (716)
......|.|.++...|+|.|+|.|.|. ...++.|.|..+|.
T Consensus 278 ~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~---~~~~~~L~V~~~p~ 326 (423)
T 3qs7_E 278 STYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTIVEKGF 326 (423)
T ss_dssp EEEETTTEEEEEEEEEESSCCTTTCEEEEEEETTE---EEEEEEEEEESSCE
T ss_pred ccccCCceeEEEEEEEEeecCHHHCEEEEEEEecC---CCceEEEEEEeCCc
Confidence 112247999999999999999999998 77788899887654
No 96
>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A
Probab=99.72 E-value=5.6e-16 Score=158.42 Aligned_cols=209 Identities=15% Similarity=0.158 Sum_probs=138.2
Q ss_pred eccccCcceEEEEEEEeCCCCceeEEEEEEecCCCCCCCCeEEeEEeCCeEEEEEECCCCCCC-----CccceEEEEEEe
Q psy7040 190 RMAQRADAGFYTVTAENINGKDSVEVEVIVLDKPSPPGGPLKVSNVHAEGVTLDWKVPDDDGG-----QPIEKYVVDKMD 264 (716)
Q Consensus 190 ~~l~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~-----~~~~~y~v~~~~ 264 (716)
..+...+.|.|++.|.|..|. ...+.+.-..+|.||.+ +.+.... +.+.|+|++|..... .....|.|+++.
T Consensus 77 ~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~v~p~pP~~-l~v~~~~-~~~~l~W~~p~~~~~~~~~~~~~l~Y~v~yr~ 153 (419)
T 2gys_A 77 QSFVVTDVDYFSFQPDRPLGT-RLTVTLTQHVQPPEPRD-LQISTDQ-DHFLLTWSVALGSPQSHWLSPGDLEFEVVYKR 153 (419)
T ss_dssp SCCCTTCEEEEEEEESSCCCE-EEEEEGGGSBCCCCCEE-EEEEEET-TEEEEEEECCC-----CCSCGGGEEEEEEEEE
T ss_pred cceeeecccEEEEeCCccccc-cceEcHHHcccCCCCCc-eEEEecC-CeEEEEECCCccccccchhccCceEEEEEEcc
Confidence 455567788889988776663 22222222247888887 7877655 699999998765321 235689999988
Q ss_pred CCCCCeEEccccCcccceEEEc--CCCCCCeEEEEEEEEcCC---CCCCCCcccceEEecCCCCCCCCCCCcEEEeeeCC
Q psy7040 265 EATGRWTPAGETEGPVTGLEVE--GLIPNHKYKFRVRAVNKQ---GKSEPLTTTASIEAKNPFNQPGKPGTPEIKDFDTD 339 (716)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~i~--~L~p~~~y~~~v~a~n~~---g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~ 339 (716)
.. ..|............+.+. +|.|++.|.++|+|.+.. +.+.+|..+..+...++...|.+|.++.+......
T Consensus 154 ~~-~~w~~~~~~~~~~~~~~~~~~~L~p~~~Y~~rVra~~~~g~~~~G~wS~WS~~~~~~t~~~~~~~p~~l~c~~~~~~ 232 (419)
T 2gys_A 154 LQ-DSWEDAAILLSNTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPGDEAQPQNLECFFDGAA 232 (419)
T ss_dssp TT-SCSTTCEEEEESSSEEEECTTTCCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCCCTTSCEEEEEEECSSS
T ss_pred CC-CChhheeeecccceEEEechhhcCCCCeEEEEEEEecCCCCCCCcccCCCCCceeeeccccccCCCceEEEEECCce
Confidence 75 5665443322234555666 999999999999999964 34667766666777776677888999999988888
Q ss_pred eEEEEecCCCCCCCccceEEEEEEeecCC-C----c-eEEEeeec---C------CCCeEEecCCCCCCeEEEEEEEEeC
Q psy7040 340 FVELAWTPPEQNGGSPIVGYIIEKKEKYS-P----I-WEKCAQTE---G------DTPKGKVLDLIEGNQYEFRVLAVNK 404 (716)
Q Consensus 340 ~i~l~W~~p~~~~~~~i~~y~v~~~~~~~-~----~-~~~~~~~~---~------~~~~~~i~~l~~~~~Y~~~v~a~n~ 404 (716)
.+.+.|.++....+ -..|.|+|+.... + . +..+.... . ....+.+.+|.+.+.|.++|.|.+.
T Consensus 233 ~l~c~W~~~~~~~~--~~~y~l~y~~~~~~g~~~~~~~~~C~~~~~~~~~~~~~~~~c~~~~~~l~~~~~y~i~V~a~~~ 310 (419)
T 2gys_A 233 VLSCSWEVRKEVAS--SVSFGLFYKPSPDAGSAVLLREEECSPVLREGLGSLHTRHHCQIPVPDPATHGQYIVSVQPRRA 310 (419)
T ss_dssp EEEEEEEEEHHHHT--TCCEEEEEECC-----CCCCCCEECCCEEEECCTTTEEEEEEEEECSCTTTCCEEEEEEEECCC
T ss_pred EEEeEEECCCCCCC--ceeEEEEEEecCccccccCcccccCCCcccccCCCcceeEEeEEECccCCccCEEEEEEEEccC
Confidence 99999998421111 2459999876532 1 1 22221111 1 1225667788888999999998643
No 97
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.72 E-value=3.2e-16 Score=154.35 Aligned_cols=247 Identities=14% Similarity=0.167 Sum_probs=163.9
Q ss_pred cEEEecCCeEEEEEEEe-ccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEEE
Q psy7040 435 DIKVRAGSNFEFDINVI-GEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAK 513 (716)
Q Consensus 435 ~~~~~~g~~~~~~~~v~-~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~ 513 (716)
.+.+.+|..+.+.|... +.|.+.+.|++++..+....++.+...+....|.|.++...|.|.|+|.|.|..|... +..
T Consensus 10 ~~~v~eg~~v~l~~~~~~~~p~~~v~W~k~~~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~-s~~ 88 (312)
T 2y23_A 10 VVNVDDDGVISLNFECDKMTPKSEFSWSKDYVSTEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIAS-SYL 88 (312)
T ss_dssp EEEECTTCCEEEEEECSSCCTTCCEEEEETTEECTTCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCCE-EEE
T ss_pred eEEEecCCeEEEEEEEeCCCCCcEEEEEECCEECCCCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcEE-EEE
Confidence 47788999988888874 6789999999999999888889888888888999999999999999999999988554 333
Q ss_pred EEEE-----------------EEEEEEeCCCCCCCCceeeEEEEEEecCCCceeeeEEEccceeeeecc-------ccce
Q psy7040 514 VTVL-----------------GCSLKWNPPEDDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDN-------VDYF 569 (716)
Q Consensus 514 ~~v~-----------------~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~-------~~~~ 569 (716)
+.+. .+..........++.....|.+. ...+.+.+.|++.+........ ....
T Consensus 89 l~v~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~---~~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~ 165 (312)
T 2y23_A 89 IDEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAE---KLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGI 165 (312)
T ss_dssp ECHHHHHHHHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEES---CCCSSCEEEEEETTEEECSSSSCEEEEETTTTE
T ss_pred EEEeeeeeeecccccCCCCccccccCCceEEeeCCCEEEEEEEE---eCCCCCEEEEEECCEECeeCCcEEEEEccCCCE
Confidence 3321 00000011111222222333332 0234455999988765432211 1223
Q ss_pred eEEEEcCCCCCCeEEEEEEEEcCCCCCccceeee------c---c-------CCCCCCcc-----ceeeccceeEEEEEE
Q psy7040 570 TKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVV------V---T-------DKPSAPEG-----PIQWLLTLTDVTWEI 628 (716)
Q Consensus 570 ~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~~~~------v---~-------~~p~~~~~-----~~~~~~~~v~l~w~i 628 (716)
..+.|.++...+.+.|+|.|.|..+.......+. + + .....|.+ .....+..+.
T Consensus 166 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~v~~G~~~~----- 240 (312)
T 2y23_A 166 IEMFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVL----- 240 (312)
T ss_dssp EEEEESCCCGGGCEEEEEEEESSSCEEEEEEEECTHHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEEETTTEEE-----
T ss_pred EEEEEccCCcccCEeEEEEEEeCCceEEEEEEEcchhhhhhcccccccccchhhccCCceeecceEEEeCCCEEE-----
Confidence 4499999999999999999987544332222221 0 0 00011220 1111223333
Q ss_pred eeEEEEeeeeccCcee-----eEEEEeCCeEeeec----ccceeeEEEEccCCCCCcEEEEEEEEcCCCCceeeEEEEEe
Q psy7040 629 SNYLQELHSSLMPISL-----ESQYLMNDKRVTID----NVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVT 699 (716)
Q Consensus 629 ~~y~v~~~~~~~~~~~-----~~~W~~~~~~~~~~----~~~~~~~~~i~~l~~~~~y~y~~~a~n~~G~~~~s~~l~v~ 699 (716)
|.|.+.| .+.|+++|..+..+ .......|.|.++...|+|.|+|.|.|..|....++.|.+.
T Consensus 241 ---------l~C~~~~~p~~~~v~W~~~g~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~i~ 311 (312)
T 2y23_A 241 ---------LKCKVANIKKETHIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDE 311 (312)
T ss_dssp ---------EEEEEESCCSSCEEEEEETTEEEEEECCC----CEEEEEECSCSGGGCEEEEEEEESTTCCEEEEEEECSC
T ss_pred ---------EEEEEcCCCCCCEEEEeeCCEECCCCCcEEEECCEEEEEECcCCHHHCEEEEEEEEcCCCceeeeeEEEec
Confidence 5566555 78999999998744 22334799999999999999999999999999988888764
No 98
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.72 E-value=1.7e-16 Score=154.58 Aligned_cols=249 Identities=20% Similarity=0.300 Sum_probs=163.8
Q ss_pred cccEEEecCCeEEEEEEEeccC-CCeEEEEe-CCeEecc-CCcEEEE-eCCCeEEEEECCCCCCCceeEEEEEEcCCCce
Q psy7040 433 LSDIKVRAGSNFEFDINVIGEP-IPTKEWLC-NDITIIS-KDRFKIV-NDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTD 508 (716)
Q Consensus 433 ~~~~~~~~g~~~~~~~~v~~~p-~~~~~W~~-~~~~~~~-~~~~~~~-~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~ 508 (716)
+....+..|+.+.|.|.+.+.+ .+.+.|++ ++..+.. ..++.+. .......|.|.++...|.|.|+|.|.|..|..
T Consensus 9 p~~~~v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~ 88 (291)
T 1qz1_A 9 PSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQ 88 (291)
T ss_dssp SSSEEEETTCCEEEEEEESSCCSCCEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCE
T ss_pred CCCceEeCCCeEEEEEEeCCCCCCcEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEEEEEEcCCCCe
Confidence 3456799999999999999987 68999999 6766653 3344433 34567799999999999999999999998643
Q ss_pred -eeEEEEEEE-EEEEEEeCCC----CCCCCceeeEEEEEEecCCCceeeeEEEccceeeeec----cccceeEEEEcCCC
Q psy7040 509 -KGTAKVTVL-GCSLKWNPPE----DDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTID----NVDYFTKITIRPLQ 578 (716)
Q Consensus 509 -~~s~~~~v~-~v~l~W~~p~----~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~----~~~~~~~~~i~~L~ 578 (716)
+....+.+. ...+.- .+. ..+......|.+. +.+.+.+.|++.+....... .......+.|.++.
T Consensus 89 ~~~~~~l~v~~~~~~~~-~~~~~~~~~g~~v~l~C~~~----~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~ 163 (291)
T 1qz1_A 89 SEATVNVKIFQKLMFKN-APTPQEFKEGEDAVIVCDVV----SSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIK 163 (291)
T ss_dssp EEEEEEEEEECCSEEEE-CCSSEEEETTSCEEECCEEE----CSSCCEEEEEETTSCSSTTCCTTEEECTTSCEEETTCC
T ss_pred eEEEEEEEeeccccccC-CCCcccccCCCeEEEEEEec----cCCCCEEEEEECCEEcccCCCceEEEccCCcEEEccCc
Confidence 344555544 111111 111 1122222333333 33445599999876542111 11123579999999
Q ss_pred CCCeEEEEEEEEcCCCCCcccee--eeccCCCCCCc-----cceeeccceeEEEEEEeeEEEEeeeeccCcee----eEE
Q psy7040 579 RSDTAQYTVTATNSQGKDQVFIE--VVVTDKPSAPE-----GPIQWLLTLTDVTWEISNYLQELHSSLMPISL----ESQ 647 (716)
Q Consensus 579 ~~~~y~~~v~a~n~~G~~~~s~~--~~v~~~p~~~~-----~~~~~~~~~v~l~w~i~~y~v~~~~~~~~~~~----~~~ 647 (716)
..+.+.|+|.|.|..+....+.. +.+..+|.... ......+..+. |.|.+.| .+.
T Consensus 164 ~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~--------------l~C~~~g~p~p~i~ 229 (291)
T 1qz1_A 164 KTDEGTYRCEGRILARGEINFKDIQVIVNVPPTVQARQSIVNATANLGQSVT--------------LVCDADGFPEPTMS 229 (291)
T ss_dssp GGGCEEEEEEEEEGGGTEEEEEEEEEEEEEEEEEEESCSEEEEETTSCCCEE--------------EEEEEEEESCCEEE
T ss_pred cccCeEEEEEEEecCCCceeeEEEEEEEecCCcccccccccccccccCceEE--------------EEEEEEEeCCCcEE
Confidence 99999999999997643322222 22333332111 01111233444 5555555 899
Q ss_pred EEeCCeEeeecc--------cceeeEEEEccCCCCCcEEEEEEEEcCCCCceeeEEEEEec
Q psy7040 648 YLMNDKRVTIDN--------VDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTD 700 (716)
Q Consensus 648 W~~~~~~~~~~~--------~~~~~~~~i~~l~~~~~y~y~~~a~n~~G~~~~s~~l~v~~ 700 (716)
|+++|..+.... ......|.|.++..+|+|.|+|.|.|..|....++.|.|..
T Consensus 230 W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 290 (291)
T 1qz1_A 230 WTKDGEPIENEEEDDEKHIFSDDSSELTIRNVDKNDEAEYVCIAENKAGEQDASIHLKVFA 290 (291)
T ss_dssp EEETTEECCCC--CCSSEEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEECCEECcCCCCCCcceEEcCCCcEEEEEecChhcCEEEEEEEEeCCCceEEEEEEEEEc
Confidence 999999876542 11235799999999999999999999999999999998875
No 99
>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A
Probab=99.71 E-value=5.2e-16 Score=142.25 Aligned_cols=185 Identities=21% Similarity=0.234 Sum_probs=136.1
Q ss_pred cCCCCCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCCCCCeEEccccC-cccceEE--EcCCCCCCeEEEE
Q psy7040 221 DKPSPPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEATGRWTPAGETE-GPVTGLE--VEGLIPNHKYKFR 297 (716)
Q Consensus 221 ~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~-~~~~~~~--i~~L~p~~~y~~~ 297 (716)
.+|.+|.+ +.+.....+++.++|+++.+ ++. ...|.|+++......|..+.... .....+. +.+|.+++.|.|+
T Consensus 2 ~pP~~P~n-l~c~~~~~~~~~c~W~p~~~-~~~-~~~Y~l~y~~~~~~~~~~c~~~~~~~~~~c~~~~~~l~~~~~Y~~~ 78 (210)
T 3n06_B 2 LPPGKPEI-FKCRSPNKETFTCWWRPGTD-GGL-PTNYSLTYHREGETLMHECPDYITGGPNSCHFGKQYTSMWRTYIMM 78 (210)
T ss_dssp CCCCCCEE-EEEEBSSSSCEEEEEECCSS-SCC-CSEEEEEEEETTCCCCEECSCSSTTCTTEEEECGGGCCSSSCEEEE
T ss_pred CCCCCCeE-eEEEeCCCCeEEEEECCCCC-CCC-CceEEEEEEECCCCccccCCCCCCCCCeEEEeCCCCcccceeEEEE
Confidence 47888887 88887788999999997654 333 47999999887767788775321 1233444 4579999999999
Q ss_pred EEEEcCCCCCCCCcccceEEecCCCCCCCCCCCcEEEeee----CCeEEEEecCCCCCC---CccceEEEEEEeecCCCc
Q psy7040 298 VRAVNKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDFD----TDFVELAWTPPEQNG---GSPIVGYIIEKKEKYSPI 370 (716)
Q Consensus 298 v~a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~----~~~i~l~W~~p~~~~---~~~i~~y~v~~~~~~~~~ 370 (716)
|.|.|..|.+...... +. ......|.+|.++.+.... .+++.|+|.+|.... |..+.+|+|+|+..++..
T Consensus 79 V~A~N~~G~~~s~~~~--~~-~~~~v~p~pP~~l~~~~~~~~~~~~~l~l~W~~p~~~~~~~g~~~~~Y~v~y~~~~~~~ 155 (210)
T 3n06_B 79 VNATNQMGSSFSDELY--VD-VTYIVQPDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAE 155 (210)
T ss_dssp EEEEETTEEEECCCEE--EC-GGGCBCCCCCEEEEEEEECCSSSCCEEEEEEECCTTCCCTTSSCCEEEEEEEECTTCSS
T ss_pred EEEEcCCCCeeCCcEE--Ec-hhheEecCCCceEEEEEecCcCCCceEEEEcCCCCCccccCCeEEEEEEEEEecCCCCC
Confidence 9999999876322211 11 1122457889888887654 578999999976543 224689999999877677
Q ss_pred eEEEeeecCCCCeEEecCCCCCCeEEEEEEEEeCCCC-CCCCCC
Q psy7040 371 WEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGP-GEPSDP 413 (716)
Q Consensus 371 ~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~-~~~s~~ 413 (716)
|.... ......+.|.+|.+++.|.|+|+|.+..|. |.+|..
T Consensus 156 ~~~~~--~~~~~~~~l~~L~p~t~Y~v~Vra~~~~g~wS~wS~~ 197 (210)
T 3n06_B 156 WEIHF--AGQQTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPA 197 (210)
T ss_dssp CEEEE--EETCSEEEECCCCTTCEEEEEEEEEESSSCCCCCCCC
T ss_pred CEEEe--ccCceEEEEeccCCCCEEEEEEEEecCCCcccCCCCc
Confidence 86543 345678999999999999999999998664 555544
No 100
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.71 E-value=2.3e-16 Score=154.97 Aligned_cols=252 Identities=15% Similarity=0.128 Sum_probs=159.3
Q ss_pred cEEEecCCeEEEEEEEec-cCCCeEEEEeCCeEecc-----------------CCcEEEEe-CCCeEEEEECCCCCCCce
Q psy7040 435 DIKVRAGSNFEFDINVIG-EPIPTKEWLCNDITIIS-----------------KDRFKIVN-DDKSTKLKVFDSKRGDSG 495 (716)
Q Consensus 435 ~~~~~~g~~~~~~~~v~~-~p~~~~~W~~~~~~~~~-----------------~~~~~~~~-~~~~~~l~i~~l~~~~~~ 495 (716)
.+.+..|+.+.|.|.+.+ .+.+.+.|++++..... ..+..+.. .....+|.|.++..+|.|
T Consensus 8 ~vtv~~G~~v~L~C~v~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G 87 (308)
T 4fom_A 8 HVTAVWGKNVSLKCLIEVNETITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNIGFSDSG 87 (308)
T ss_dssp SCEEETTSCEEECCBCCCSSCEEEEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEESCCSSSBCCEEECSCCGGGCE
T ss_pred EeEEEcCCcEEEEEEecCCCCCcEEEEEECCCCCCceEEEecCCCCceecCcccceEEeeccCCCceEEEEccCCHHHCE
Confidence 367889999999999864 44557999986532110 11111111 123457999999999999
Q ss_pred eEEEEEEcC-CCceeeEEEEEEE---EEEEEEeCCC-CC-CCC-ceeeEEEEEEecCCCceeeeEEEccceeeeeccc--
Q psy7040 496 IYTLAVKNS-WGTDKGTAKVTVL---GCSLKWNPPE-DD-GGA-PIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDNV-- 566 (716)
Q Consensus 496 ~y~~~a~n~-~g~~~~s~~~~v~---~v~l~W~~p~-~~-~~~-~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~~-- 566 (716)
.|+|.|.|. .|.......+.+. .+.+.-.+.. .. .+. ....|.. ..+.+.+.+.|++.+.........
T Consensus 88 ~Y~C~a~n~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~C~~---~~g~P~~~i~W~~~~~~~~~~~~~~~ 164 (308)
T 4fom_A 88 KYICKAVTFPLGNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIA---ATGKPVAHIDWEGDLGEMESTTTSFP 164 (308)
T ss_dssp EEEEEEEETTTEEEEEEEEEEEEBCCEEEEEECSSCCCTTCSCEEEEEEEE---EEEBSCCEEEECCCSSBCCEEEEECT
T ss_pred EEEEEEeeCCCcceeeeeEEEeeeccccccccccceeEEcCCceEEEEEEe---cCCcCCceEEEEECCcccccccceee
Confidence 999999986 4455555555554 2222211211 11 111 1122221 122234559999876654322110
Q ss_pred ----cceeEEEEcCCCCCCeEEEEEEEEcCCCCCccceeee--ccCCCCCCc---c-ceeeccceeEEEEEEeeEEEEee
Q psy7040 567 ----DYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVV--VTDKPSAPE---G-PIQWLLTLTDVTWEISNYLQELH 636 (716)
Q Consensus 567 ----~~~~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~~~~--v~~~p~~~~---~-~~~~~~~~v~l~w~i~~y~v~~~ 636 (716)
.....+.|......+.+.|+|.|.|..|.......+. |..+|.... . .....+..+.
T Consensus 165 ~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~v~------------- 231 (308)
T 4fom_A 165 NETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQYAPEVSVTGYDGNWFVGRKGVN------------- 231 (308)
T ss_dssp TSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCCEEEEECCBCCCSCEETTCCSCE-------------
T ss_pred eecccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEecCCeeEEcccceeeeeccccEE-------------
Confidence 1124688889999999999999999988776555444 444442111 0 1111233344
Q ss_pred eeccCcee-----eEEEEeCCeEeeec-ccceeeEEEEccCCCCCcEEEEEEEEcCCCCceeeEEEEEecCCC
Q psy7040 637 SSLMPISL-----ESQYLMNDKRVTID-NVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTDKPS 703 (716)
Q Consensus 637 ~~~~~~~~-----~~~W~~~~~~~~~~-~~~~~~~~~i~~l~~~~~y~y~~~a~n~~G~~~~s~~l~v~~~p~ 703 (716)
|.|.+.| .+.|++++..+... .......+.|.++..+|+|.|+|.|.|..|..+.++.|.|..+|.
T Consensus 232 -l~C~~~g~P~p~~v~W~k~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~A~N~~G~~~~~~~l~V~~~P~ 303 (308)
T 4fom_A 232 -LKCNADANPPPFKSVWSRLDGQWPDGLLASDNTLHFVHPLTFNYSGVYICKVTNSLGQRSDQKVIYISDPPH 303 (308)
T ss_dssp -EECCEEEESCEEEEECCBSSSCCCSSCBCSTTEEECCSCCCSCCCSEEEEEEEETTEEEEEEEECCEECCC-
T ss_pred -EEEEEecCCCCcEEEEEECCeECCCcEEEcCCeEEEECCCChhhCEEEEEEEEeCCCcEEEEEEEEEEcCCC
Confidence 5666665 58999998877655 223336677899999999999999999999999999999999885
No 101
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.71 E-value=7.2e-17 Score=167.92 Aligned_cols=379 Identities=12% Similarity=0.046 Sum_probs=198.2
Q ss_pred ccEEEEeccccCcceEEEEEEEeCCCCceeEEEEEEecCCCCCC-CCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEE
Q psy7040 184 NTKLGVRMAQRADAGFYTVTAENINGKDSVEVEVIVLDKPSPPG-GPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDK 262 (716)
Q Consensus 184 ~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~~p~-~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~ 262 (716)
...|.|.+++. |.| |+|.|.|..+..+..+.|.|..+|.... .+.......++.+.|.|..... .+...+.+.|
T Consensus 49 ~~~l~i~~v~~-d~g-Y~C~a~~~~~~~~~~~~l~V~~~P~~~~~~~~~~~v~~G~~v~L~C~~~g~---~~~~~~~v~W 123 (450)
T 1z7z_I 49 RKVYELSNVQE-DSQ-PMCYSNCPDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGG---APRANLTVVL 123 (450)
T ss_dssp EEEEEEEEECS-CBC-CEEEEEETTEEEEEECEEEEEBCCSEEEECCCCSEECTTSEEEEEEEEECC---BCGGGEEEEE
T ss_pred ceEEEEEeccc-CCe-eEEEEeCCCCcceeEEEEEEEeCCCcceecCCCceEeeCCeEEEEEEecCC---CCCcCcEEEE
Confidence 34799999988 999 9999988777778888888887664321 1111234468899999996432 1232333444
Q ss_pred EeCCCCCeEEccccCcccceEEEcCCCCCCeEEEEEEEEcCCCCCCCCc-----ccceEEecCCCCCCCCCCC-cEEEee
Q psy7040 263 MDEATGRWTPAGETEGPVTGLEVEGLIPNHKYKFRVRAVNKQGKSEPLT-----TTASIEAKNPFNQPGKPGT-PEIKDF 336 (716)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~~~-----~~~~~~~~~~~~~p~~p~~-~~~~~~ 336 (716)
...+................+.|.++...+.+.|+|.|.|..|...... ....+.+.. .++.+|.. ......
T Consensus 124 ~k~g~~l~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~--~~~~~p~~~~~~~v~ 201 (450)
T 1z7z_I 124 LRGEKELKREPAVGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFV--LPATPPQLVSPRVLE 201 (450)
T ss_dssp EETTEEEEEEECCTTTEEEEEEEECCSSCSSCEEEEEEEEECGGGTSCEEEEECCCEECEECC--CCSSCCEEECCSEEE
T ss_pred eeCCEEeecccccccccceEEEEEeeccccCceEEEEEEcccCCCCceEEeeccCccceeeec--cCCCCCEecCceeEE
Confidence 3332111000001122345899999999999999999999877432100 000111111 11122221 001223
Q ss_pred eCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEE-ecCCCCCC--eEEEEEEEEeCCCCCCCCCC
Q psy7040 337 DTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGK-VLDLIEGN--QYEFRVLAVNKGGPGEPSDP 413 (716)
Q Consensus 337 ~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~-i~~l~~~~--~Y~~~v~a~n~~g~~~~s~~ 413 (716)
.+..+.|.|...... +.....+.|...+........ ......... ..++...+ .|.|+|.|.|..|....+
T Consensus 202 ~G~~v~l~C~~~g~~---P~~~~~~~W~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~d~G~~~Y~C~a~n~~g~~~~~-- 275 (450)
T 1z7z_I 202 VDTQGTVVCSLDGLF---PVSEAQVHLALGDQRLNPTVT-YGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETL-- 275 (450)
T ss_dssp TTSEEEEEEEEESCT---TGGGCEEEEEETTEECCCEEE-EETTEEEEEEEEECCGGGCEEEEEEEEEEETTEEEEEE--
T ss_pred eCCcEEEEEEeeCCC---CCCceEEEEeCCCEeCCceEE-ecCCceeEEEEEEeEhhhCCcEEEEEEEccCCccEEEE--
Confidence 466778888762210 211223334333211000111 111111111 11345555 459999999987754221
Q ss_pred CCceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCC
Q psy7040 414 TAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGD 493 (716)
Q Consensus 414 ~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~ 493 (716)
....+... .+|.+. .....+.+|+.+.|.|.+. |.+.+.| ++..+. ..+....|.|.++..+|
T Consensus 276 -~~l~V~~~-~~p~i~---~~~~~v~~G~~v~l~C~~~--p~p~i~W--~g~~~~--------~~~~~~~L~i~~~~~~d 338 (450)
T 1z7z_I 276 -QTVTIYSF-PAPNVI---LTKPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQ--------PLGPRAQLLLKATPEDN 338 (450)
T ss_dssp -EEEEEECC-CCCEEE---ESCSEEETTCEEEEEEEC----------------------------CCCCCEEEECCGGGT
T ss_pred -EEEEEecC-CCCeEe---cCCeeEeCCCcEEEEEecC--CCCEeEE--CCEEcC--------CCCceEEEEEecCcccC
Confidence 11122111 135544 2245789999999999987 8899999 555541 11233479999999999
Q ss_pred ceeEEEEEEcCCC-ce---eeEEEEEEE-EEEEEEeC-CC----CCCCCceeeEEEEEEecCCCceeeeEEEccceeeee
Q psy7040 494 SGIYTLAVKNSWG-TD---KGTAKVTVL-GCSLKWNP-PE----DDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTI 563 (716)
Q Consensus 494 ~~~y~~~a~n~~g-~~---~~s~~~~v~-~v~l~W~~-p~----~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~ 563 (716)
.|.|+|.|.|..+ .. ..+..+.+. ...+.-.. |. ..+......|.+... +.|.+.|++.+......
T Consensus 339 ~G~Y~C~a~n~~~g~~~~~~~~~~l~V~~~P~~~~~~~p~~~~~~~g~~~~l~C~~~g~----P~p~i~W~~~g~~~~~~ 414 (450)
T 1z7z_I 339 GRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGN----PLPELKCLKDGTFPLPI 414 (450)
T ss_dssp TCEEEEEEEEEETTEEEEEEEEEECEEEEEEECCSTTSCSEEEEETTCEECCCCCCEEE----SCCEEEEEETTTEECCT
T ss_pred CceEEEEEEcCCCCcccccceeEEEEEecCCceeeccCCCceeEcCCCeEEEEEecccC----CCCcEEEEECCcccCCC
Confidence 9999999997655 32 244444444 11111000 00 011111233433333 34459999988632211
Q ss_pred ccccceeEEEEcCCCCCCeEEEEEEEEcCCCCCccceeeec
Q psy7040 564 DNVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVV 604 (716)
Q Consensus 564 ~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~~~~v 604 (716)
...+ .+...+.+.|+|.|.|..|....+..+.|
T Consensus 415 -----g~~~---~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 447 (450)
T 1z7z_I 415 -----GESV---TVTRDLEGTYLCRARSTQGEVTREVTVNV 447 (450)
T ss_dssp -----TSCE---ECCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred -----CCeE---eEehhhCeEEEEEEEeCCCceeEEEEEEE
Confidence 1222 57788999999999999997766655544
No 102
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.71 E-value=4.7e-16 Score=158.87 Aligned_cols=362 Identities=15% Similarity=0.107 Sum_probs=206.9
Q ss_pred ecCCCCCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCC---CC-CeEEccccCcccceEEEcCCCCCCeEE
Q psy7040 220 LDKPSPPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEA---TG-RWTPAGETEGPVTGLEVEGLIPNHKYK 295 (716)
Q Consensus 220 ~~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~---~~-~~~~~~~~~~~~~~~~i~~L~p~~~y~ 295 (716)
..+|.....|-.+....++.++|.|.... +.+...+.+...... .. .... .....++.|.++...+.+.
T Consensus 4 ~~~P~~~~~p~~~~v~~G~~v~l~C~~~~---~~p~~~v~W~k~g~~~~~~~~~~~~----~~~~~~L~i~~~~~~D~G~ 76 (395)
T 1bih_A 4 DKYPVLKDQPAEVLFRENNPTVLECIIEG---NDQGVKYSWKKDGKSYNWQEHNAAL----RKDEGSLVFLRPQASDEGH 76 (395)
T ss_dssp -CCCEECCCCSEEEEETTSCEEECCCEES---CCSSCEEEEEESSSBCCTTTTTEEE----CTTSCCEEESSCCGGGCEE
T ss_pred CCCCEeecCCCceEEeCCCEEEEEEEEec---CCCCceEEEEECCcCcccccceEEE----ecCCceEEEecCCCCCCcE
Confidence 34443333333455567889999998633 123334443331110 00 0111 1234689999999999999
Q ss_pred EEEEEEcCCCCCCCCcccceEEecCCCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecC-CCceE--
Q psy7040 296 FRVRAVNKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKY-SPIWE-- 372 (716)
Q Consensus 296 ~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~-~~~~~-- 372 (716)
|+|.|.|..|........ +.+.....++..|. ......+..+.|.|..+.. .+...+..+..... .....
T Consensus 77 Y~C~a~n~~g~~~s~~~~--l~v~~~~~p~~~~~--~~~~~~G~~v~l~C~~~~~---~p~~~v~W~~~~~~~~~~~~~~ 149 (395)
T 1bih_A 77 YQCFAETPAGVASSRVIS--FRKTYLIASPAKTH--EKTPIEGRPFQLDCVLPNA---YPKPLITWKKRLSGADPNADVT 149 (395)
T ss_dssp EEEEEEETTEEEECCCEE--EEEEEEECCCCEEE--EECCBTTEEEEECCCCCEE---ESCCEEEEEEEETTSCGGGCCC
T ss_pred EEEEEEeCCCeEEeEEEE--EEEEEeecCCcCCc--ceeeeeCCcEEEEecCCCC---CCCCeEEEEecCCCcCcccccc
Confidence 999999987754221111 11110001111111 1222345678888874211 11122222221100 00000
Q ss_pred --EEeeecCCCCeEEecCCCCCCeE---EEEEEEEeCCCCCCCCCCCCceEeecC-------CCCCcccccccccEEEec
Q psy7040 373 --KCAQTEGDTPKGKVLDLIEGNQY---EFRVLAVNKGGPGEPSDPTAPHIARAK-------KVSPYINRDQLSDIKVRA 440 (716)
Q Consensus 373 --~~~~~~~~~~~~~i~~l~~~~~Y---~~~v~a~n~~g~~~~s~~~~~~~~~~~-------~~~P~~~~~~~~~~~~~~ 440 (716)
...........+.|.++...+.+ .|+|.|.|..|................ ..+|.+ .+....+..
T Consensus 150 ~~~~~~~~~~~~~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~~~~~~~~~ 226 (395)
T 1bih_A 150 DFDRRITAGPDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQY---VSKDMMAKA 226 (395)
T ss_dssp CCCTTEEECTTSCEEEEEECGGGCCSSEEEEEEEECTTCSSCEEEEEEEECCCBCCSSCCCCCCEEEE---ECCSEEEET
T ss_pred cccccEEEcCCCcEEEEEEeeccCCCceEEEEEEEecccceEEEeeeEEecccccccccccCCcCcee---cCCceEEEC
Confidence 00001122346888888877777 999999998876432111000000000 112322 245678999
Q ss_pred CCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEE--eCCCeEEEEECCCCCCCceeEEEEEEcCCCceee-EEEEEEE
Q psy7040 441 GSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIV--NDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKG-TAKVTVL 517 (716)
Q Consensus 441 g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~--~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~-s~~~~v~ 517 (716)
|+.+.|.|.+.+.|.+.+.|++++..+......++. .......|.|.++...|.|.|+|.|.|..|.... +..+.+.
T Consensus 227 G~~v~l~C~~~g~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~V~ 306 (395)
T 1bih_A 227 GDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVV 306 (395)
T ss_dssp TSCEEEEEEEECSSCCCCEEEETTEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCEEEEEEEEEE
T ss_pred CCcEEEEEEeccCCCCeEEEEECCEEcCCCCceeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCCCceEEEEEEEEE
Confidence 999999999999999999999999887654332222 2233458999999999999999999999998655 6777766
Q ss_pred -EEEEEEeCCC----CCCCCceeeEEEEEEecCCCceeeeEEEccceeeeeccccceeEEEEcCCCCCCeEEEEEEEEcC
Q psy7040 518 -GCSLKWNPPE----DDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDNVDYFTKITIRPLQRSDTAQYTVTATNS 592 (716)
Q Consensus 518 -~v~l~W~~p~----~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~ 592 (716)
...+.-.+.. ..+......|.+...+... +.|++.+..............+.|.++...+.+.|+|.|.|.
T Consensus 307 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~----v~W~~~g~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~ 382 (395)
T 1bih_A 307 SAPKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPN----VVWSHNAKPLSGGRATVTDSGLVIKGVKNGDKGYYGCRATNE 382 (395)
T ss_dssp EEEEEEECCCSEEEECTTSCEEEECEEEEESCCC----CEEEETTEECCSSSEEEETTEEEESSCCSTTCEEEEEEEEET
T ss_pred cCCccccCCCcceEecCCCeEEEEEEECcccCCe----eEEEECCEECCCCceEEECCEEEEeeCCcccCEEEEEEEEcc
Confidence 2222211111 2223334455555444444 999998765432111111248999999999999999999999
Q ss_pred CCCCccceee
Q psy7040 593 QGKDQVFIEV 602 (716)
Q Consensus 593 ~G~~~~s~~~ 602 (716)
.|....+..+
T Consensus 383 ~G~~~~~~~l 392 (395)
T 1bih_A 383 HGDKYFETLV 392 (395)
T ss_dssp TEEEEEEEEE
T ss_pred CCCceEEEEE
Confidence 9976555444
No 103
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.71 E-value=2.9e-15 Score=153.38 Aligned_cols=351 Identities=17% Similarity=0.140 Sum_probs=207.1
Q ss_pred EeEEeCCeEEEEEECCCCCCCCccceEEEEEEeC--C---CCCeEEccccCcccceEEEcCC-----CCCCeEEEEEEEE
Q psy7040 232 VSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDE--A---TGRWTPAGETEGPVTGLEVEGL-----IPNHKYKFRVRAV 301 (716)
Q Consensus 232 ~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~--~---~~~~~~~~~~~~~~~~~~i~~L-----~p~~~y~~~v~a~ 301 (716)
+....++.+.|.|..... .+...+.+..... . ...... .....+.|.++ ...+.+.|+|.|.
T Consensus 31 ~~v~~G~~v~L~C~~~~~---~p~~~v~W~k~g~~~~~~~~~~~~~-----~~~~~l~i~~~~~~~~~~~D~G~Y~C~~~ 102 (403)
T 3laf_A 31 AVTMRGGNVLLNCSAESD---RGVPVIKWKKDGLILALGMDDRKQQ-----LPNGSLLIQNILHSRHHKPDEGLYQCEAS 102 (403)
T ss_dssp EEECTTCCEEECCEEECT---TCCCEEEEEETTEECCTTSCTTEEE-----CTTSCEEECSCCCBTTBCSSCEEEEEEEE
T ss_pred eEEecCCcEEEEEEcCCC---CCCceEEEEECCEECccCCcccEEE-----ecCCcEEEeeeeccCCCCCcceEEEEEEE
Confidence 344568899999986322 1233333332110 0 011111 12346777777 6779999999999
Q ss_pred cCCCCCCCCcccceEEecCCCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCc---eEEEeeec
Q psy7040 302 NKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPI---WEKCAQTE 378 (716)
Q Consensus 302 n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~---~~~~~~~~ 378 (716)
+..+....+... .+.+..+......+..+ ....+..+.|.|..... +.. .+.|...+... ........
T Consensus 103 ~~~~~~~~s~~~-~l~v~~p~~~~~~~~~~--~~~~G~~v~l~C~~~~~----p~~--~v~W~~~~~~~~~~~~~~~~~~ 173 (403)
T 3laf_A 103 LGDSGSIISRTA-KVMVAGPLRFLSQTESI--TAFMGDTVLLKCEVIGD----PMP--TIHWQKNQQDLNPIPGDSRVVV 173 (403)
T ss_dssp CGGGCEEECCCE-EEEECCCCEECSCCCCE--EEETTSCEEECCCEECS----SCC--EEEEEESSSBCCCCTTCCSEEE
T ss_pred eCCCccEEEEEE-EEEecCCCccccCCCcE--EEEcCCeEEEEEEEccc----CCC--eEEEEECCEeccccCCceEEEE
Confidence 754332222221 22332221112233333 33456678888875221 122 23333222110 00000111
Q ss_pred CCCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCC--CcccccccccEEEecCCeEEEEEEEeccCCC
Q psy7040 379 GDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVS--PYINRDQLSDIKVRAGSNFEFDINVIGEPIP 456 (716)
Q Consensus 379 ~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~--P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~ 456 (716)
.....+.|.++...+.+.|+|.|.|..|....... .......+.. +......+....+..|..+.|.|.+.+.|.+
T Consensus 174 ~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~--~l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~ 251 (403)
T 3laf_A 174 LPSGALQISRLQPGDSGVYRCSARNPASTRTGNEA--EVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCVSGYPPP 251 (403)
T ss_dssp CTTSCEEECSCCGGGCEEEEEEEECSSCCCBCCCE--EEEEECCCCCCEEEEEEECCCCEEEETTSCEEECCEEEEESCC
T ss_pred cCCceEEEcccccccCEEEEEEEEcCCCceeccce--eEEEecCCCcccCceEecCCCceEecCCCcEEEEEEcCCCCCC
Confidence 23457999999999999999999998764322211 1222111111 1111223456778899999999999999999
Q ss_pred eEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEEEEEEEE-EEEEEeCCC----CCCC
Q psy7040 457 TKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVLG-CSLKWNPPE----DDGG 531 (716)
Q Consensus 457 ~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v~~-v~l~W~~p~----~~~~ 531 (716)
.+.|++++..+........... ...|.|.++...|.|.|+|.|.|..|..+.+..+.+.. ..+. ..+. ..+.
T Consensus 252 ~~~W~~~~~~~~~~~~~~~~~~--~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~-~~~~~~~~~~g~ 328 (403)
T 3laf_A 252 SFTWLRGEEVIQLRSKKYSLLG--GSNLLISNVTDDDSGTYTCVVTYKNENISASAELTVLVPPWFL-NHPSNLYAYESM 328 (403)
T ss_dssp EEEEEETTEECCCSSSSEEEET--TTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEE-ECCCCEECCTTC
T ss_pred eEEEEECCeeccCCCceEEECC--ccEEEEeCCCHHHCEEEEEEEEcCCCceEEEEEEEEECCCcEe-ecCcceEEecCC
Confidence 9999999988764433222222 23799999999999999999999999888888887762 2221 1221 1223
Q ss_pred CceeeEEEEEEecCCCceeeeEEEccceeeeecc--ccceeEEEEcCCCCCCeEEEEEEEEcCCCCCccceeeeccCCC
Q psy7040 532 APIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDN--VDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTDKP 608 (716)
Q Consensus 532 ~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~--~~~~~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~~~~v~~~p 608 (716)
.....|.+...+. +.+.|++.+........ ......+.|.++...+.+.|+|.|.|..|....+..+.|..||
T Consensus 329 ~v~l~C~~~g~p~----p~v~W~~~g~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~P~ 403 (403)
T 3laf_A 329 DIEFECAVSGKPV----PTVNWMKNGDVVIPSDYFQIVGGSNLRILGVVKSDEGFYQCVAENEAGNAQSSAQLIVPKPA 403 (403)
T ss_dssp CEEECCEEEEESC----CEEEEEETTEECCCSSSEEEETTTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEECCCC-
T ss_pred eEEEEEEEeeccC----CEEEEEECCEECCCCCcEEEecCccEEEeccccccCEEEEEEEEcCCceEEEEEEEEEeCCC
Confidence 3344555544443 34999998765432211 1123679999999999999999999999988777777776654
No 104
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.71 E-value=1.8e-15 Score=154.03 Aligned_cols=307 Identities=15% Similarity=0.170 Sum_probs=190.6
Q ss_pred CccEEEEeccccCc------ceEEEEEEEeCCCCc-eeEEEEEEecCCCCCCCCeEEeEEeCCeEEEEEECCCCCCCCcc
Q psy7040 183 YNTKLGVRMAQRAD------AGFYTVTAENINGKD-SVEVEVIVLDKPSPPGGPLKVSNVHAEGVTLDWKVPDDDGGQPI 255 (716)
Q Consensus 183 ~~~~l~i~~l~~~~------~g~y~c~a~n~~g~~-~~~~~~~v~~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~ 255 (716)
.++.|.|.+++..| +|.|+|.|.|..|.. +..+.+.+..+|.....+.......++.+.|.|..+..... +.
T Consensus 57 ~~~~L~i~~~~~~d~~~~~d~G~Y~C~a~n~~g~~~s~~~~v~v~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~-~~ 135 (388)
T 2v5m_A 57 SDGKLVFPPFRAEDYRQEVHAQVYACLARNQFGSIISRDVHVRAVVAQYYEADVNKEHVIRGNSAVIKCLIPSFVAD-FV 135 (388)
T ss_dssp STTEEEECCCCGGGCCHHHHEEEEEEEEEETTEEEECCCEEEEEECCCCCCCBCCCEEEETTSCEEECCBCCTTTTT-TE
T ss_pred CCceEEecccChhhccccccCceEEEEEEccCCeEEecceEEEEccccccccCccceeeecCCcEEEEEECcCCCCC-Cc
Confidence 45689999999997 999999999999873 45677777776655443334455678899999997543211 22
Q ss_pred ceEEEEEEeCCCCCeEEc-----cccCcccceEEEcCCCCCCe-EEEEEEEEcCCCCCC-CCcccceEEecCCC--CCCC
Q psy7040 256 EKYVVDKMDEATGRWTPA-----GETEGPVTGLEVEGLIPNHK-YKFRVRAVNKQGKSE-PLTTTASIEAKNPF--NQPG 326 (716)
Q Consensus 256 ~~y~v~~~~~~~~~~~~~-----~~~~~~~~~~~i~~L~p~~~-y~~~v~a~n~~g~~~-~~~~~~~~~~~~~~--~~p~ 326 (716)
.. +.|...+....... .........+.|.++...+. +.|+|.|.|..+... .+.....+.+..+. ..|.
T Consensus 136 ~~--v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~ 213 (388)
T 2v5m_A 136 EV--VSWHTDEEENYFPGAEYDGKYLVLPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPR 213 (388)
T ss_dssp EE--EEEEETTCCEECSSSCBTTTEEECTTSCEEESSCCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCSCEEEE
T ss_pred ce--EEEEeCCCcccccccCCCCcEEEccCCcEEEecCCccccCeeEEEEeccCCCCceeeccccceEEEecCCcCCCCc
Confidence 23 33332221110000 00001235799999999999 999999999754322 12111122222110 0111
Q ss_pred CC---CCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecC-CCceEEEe----eecCCCCeEEecCCCCCCeEEEE
Q psy7040 327 KP---GTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKY-SPIWEKCA----QTEGDTPKGKVLDLIEGNQYEFR 398 (716)
Q Consensus 327 ~p---~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~-~~~~~~~~----~~~~~~~~~~i~~l~~~~~Y~~~ 398 (716)
.| ... .....+..+.|.|..... +... +.|...+ ........ ........+.|.++...+.+.|+
T Consensus 214 ~~~~~~~~-~~v~~G~~v~l~C~~~g~----p~p~--v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 286 (388)
T 2v5m_A 214 TPALVQKP-LELMVAHTISLLCPAQGF----PAPS--FRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYL 286 (388)
T ss_dssp CCSSCCCC-EEEETTSCEEECCCCEEE----SCCE--EEEEEECTTSSCEEECCCSSSEEEETTEEEESSCCGGGCEEEE
T ss_pred CccccCCc-eEEeeCCcEEEEEECCCC----CCCE--EEEEecCCCCcccccccccCceecccCEEEECcCCHHHCeEEE
Confidence 11 111 122345678888875211 1122 2222211 11000000 00113457999999999999999
Q ss_pred EEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeC
Q psy7040 399 VLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVND 478 (716)
Q Consensus 399 v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~ 478 (716)
|.|.|..|...... ...+. .+|.+. ..+....+..|+.+.|.|.+.+.|.+.+.|++++..+...
T Consensus 287 C~a~n~~g~~~~~~---~l~V~---~~p~~~-~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~i~~~-------- 351 (388)
T 2v5m_A 287 CVVNNSVGGESVET---VLTVT---APLSAK-IDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHS-------- 351 (388)
T ss_dssp EEEECSSCEEEEEE---EEEEE---EEEEEE-EESSEEEECTTSCEEEEEEEEEECCCEEEEEETTEECSCC--------
T ss_pred EEEecCCCceeEEE---EEEEe---CCCccc-cCCCcEEecCCCCEEEEEEeccccCCeEEEEECCEECccC--------
Confidence 99999988532111 11111 133322 1234577889999999999999999999999999887532
Q ss_pred CCeEEEEECCCCCCCceeEEEEEEcCCCceeeEEEEEE
Q psy7040 479 DKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTV 516 (716)
Q Consensus 479 ~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v 516 (716)
...|.|.++...|.|.|+|.|.|..|....++.+.+
T Consensus 352 --~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 387 (388)
T 2v5m_A 352 --ESVLRIESVKKEDKGMYQCFVRNDRESAEASAELKL 387 (388)
T ss_dssp --SSEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred --CCEEEEecCChhhCEEEEEEEEcCCCcEEEEEEEEe
Confidence 348999999999999999999999999988887765
No 105
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.69 E-value=1.5e-17 Score=165.49 Aligned_cols=261 Identities=16% Similarity=0.160 Sum_probs=105.2
Q ss_pred cccEEEecCCeEEEEEEEecc-CCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeE
Q psy7040 433 LSDIKVRAGSNFEFDINVIGE-PIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGT 511 (716)
Q Consensus 433 ~~~~~~~~g~~~~~~~~v~~~-p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s 511 (716)
+..+.+..|+.+.|.|.+.+. |.+.+.|++++..+....++.+ ....|.|.++...|.|.|+|.|.|. |.....
T Consensus 15 ~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~----~~~~L~i~~v~~~D~G~Y~C~a~n~-~~~~~~ 89 (334)
T 1ry7_B 15 QEQLVFGSGDAVELSCPPPGGGPMGPTVWVKDGTGLVPSERVLV----GPQRLQVLNASHEDSGAYSCRQRLT-QRVLCH 89 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCcEEEecCCcEEEEeeCCCCCCCcceEEEECCeeCCCcccEEe----ccceEEEeecccccCEEEEEEEEeC-CeEEEE
Confidence 567789999999999999887 5789999999988866555544 2458999999999999999999998 666555
Q ss_pred EEEEEEEEEE----------------EEeCCCCCC-----CCc-----eeeEEEEEEecCCCceeeeEEEccceeeeec-
Q psy7040 512 AKVTVLGCSL----------------KWNPPEDDG-----GAP-----IEYYMVEKMETDTGKVLIKWIRTNDKRVTID- 564 (716)
Q Consensus 512 ~~~~v~~v~l----------------~W~~p~~~~-----~~~-----i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~- 564 (716)
..+.+..... ...+|.... ... -....+.....+.+.+.+.|++.+.......
T Consensus 90 ~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~ 169 (334)
T 1ry7_B 90 FSVRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHR 169 (334)
T ss_dssp -----------------------------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCCEEECCBTTBCCCTTSS
T ss_pred EEEEEeccCccccccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEccCCCCCeEEEEECCEECccccc
Confidence 5555541110 011111000 000 0012233332333456699998776543221
Q ss_pred -----cccceeEEEEcCCCCCCeEEEEEEEEcCCCCCccceeeeccCC-CCCCccceeeccceeEEEEEEeeEEEEeeee
Q psy7040 565 -----NVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTDK-PSAPEGPIQWLLTLTDVTWEISNYLQELHSS 638 (716)
Q Consensus 565 -----~~~~~~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~~~~v~~~-p~~~~~~~~~~~~~v~l~w~i~~y~v~~~~~ 638 (716)
.......+.|.++...+.+.|+|.|.|..|.......+.|... |..|. +.........+. .|-.+ .|
T Consensus 170 ~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~-~~~~~~~~~~~~---~G~~v---~l 242 (334)
T 1ry7_B 170 IGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPI-LQAGLPANQTAV---LGSDV---EF 242 (334)
T ss_dssp TTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECCCCSSCB-CCTTCSCCEEEE---SSCCE---EE
T ss_pred ccceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecCCCCCCc-eEecCCCceEEe---CCCCE---EE
Confidence 1123458999999999999999999999887655555555432 22232 211111111110 12222 27
Q ss_pred ccCcee----eEEEEe----CCeEeeeccc---------------ceeeEEEEccCCCCCcEEEEEEEEcCCCCceeeEE
Q psy7040 639 LMPISL----ESQYLM----NDKRVTIDNV---------------DYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIE 695 (716)
Q Consensus 639 ~~~~~~----~~~W~~----~~~~~~~~~~---------------~~~~~~~i~~l~~~~~y~y~~~a~n~~G~~~~s~~ 695 (716)
.|.+.| .+.|++ +|..+..+.. .....|.|.++...|+|.|+|.|.|..|....++.
T Consensus 243 ~C~~~g~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~ 322 (334)
T 1ry7_B 243 HCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAGNSIGFSHHSAW 322 (334)
T ss_dssp CCCCBCSSCEEEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCCCEEECSCCTTSCSEEEEEEEESSCCEEEEEE
T ss_pred EEEEecCCCCeEEEEECCcCCCccccCCCCeeEEEeecCccccccccccEEEEccCCHHHCEEEEEEEeCCCCeEEEEEE
Confidence 888877 899999 6766543311 01137999999999999999999999999999999
Q ss_pred EEEecCCCCC
Q psy7040 696 VVVTDKPSAP 705 (716)
Q Consensus 696 l~v~~~p~~p 705 (716)
|.|...|.+.
T Consensus 323 l~V~~~~~~~ 332 (334)
T 1ry7_B 323 LVVLPAEEEL 332 (334)
T ss_dssp EEEECSCCC-
T ss_pred EEEEECCCCc
Confidence 9999876543
No 106
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.68 E-value=1.9e-14 Score=146.44 Aligned_cols=303 Identities=14% Similarity=0.092 Sum_probs=186.7
Q ss_pred cceEEEcCCCCCC------eEEEEEEEEcCCCCCCCCcccceEEecCCCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCC
Q psy7040 280 VTGLEVEGLIPNH------KYKFRVRAVNKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGG 353 (716)
Q Consensus 280 ~~~~~i~~L~p~~------~y~~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~ 353 (716)
...+.|.++...+ .+.|+|.|.|..|..... ...+.+..+......+... ....+..+.|.|..+.....
T Consensus 58 ~~~L~i~~~~~~d~~~~~d~G~Y~C~a~n~~g~~~s~--~~~v~v~~~p~~~~~~~~~--~v~~G~~v~l~C~~~~~~~~ 133 (388)
T 2v5m_A 58 DGKLVFPPFRAEDYRQEVHAQVYACLARNQFGSIISR--DVHVRAVVAQYYEADVNKE--HVIRGNSAVIKCLIPSFVAD 133 (388)
T ss_dssp TTEEEECCCCGGGCCHHHHEEEEEEEEEETTEEEECC--CEEEEEECCCCCCCBCCCE--EEETTSCEEECCBCCTTTTT
T ss_pred CceEEecccChhhccccccCceEEEEEEccCCeEEec--ceEEEEccccccccCccce--eeecCCcEEEEEECcCCCCC
Confidence 4579999999887 999999999988753211 1112222111222223333 33456789999987433211
Q ss_pred ccceEEEEEEeecCCCceEE-----EeeecCCCCeEEecCCCCCCe-EEEEEEEEeCCCCC-CCCCCCCceEeecC--CC
Q psy7040 354 SPIVGYIIEKKEKYSPIWEK-----CAQTEGDTPKGKVLDLIEGNQ-YEFRVLAVNKGGPG-EPSDPTAPHIARAK--KV 424 (716)
Q Consensus 354 ~~i~~y~v~~~~~~~~~~~~-----~~~~~~~~~~~~i~~l~~~~~-Y~~~v~a~n~~g~~-~~s~~~~~~~~~~~--~~ 424 (716)
+ ...+.|...+...... ..........+.|.++...+. +.|+|.|.|..+.. ..+..........+ ..
T Consensus 134 -~--~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~ 210 (388)
T 2v5m_A 134 -F--VEVVSWHTDEEENYFPGAEYDGKYLVLPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSS 210 (388)
T ss_dssp -T--EEEEEEEETTCCEECSSSCBTTTEEECTTSCEEESSCCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCSCE
T ss_pred -C--cceEEEEeCCCcccccccCCCCcEEEccCCcEEEecCCccccCeeEEEEeccCCCCceeeccccceEEEecCCcCC
Confidence 1 1334444332110000 000012345789999999988 99999999986432 22222112222111 11
Q ss_pred CCcccccccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEe------ccCCcEEEEeCCCeEEEEECCCCCCCceeEE
Q psy7040 425 SPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITI------ISKDRFKIVNDDKSTKLKVFDSKRGDSGIYT 498 (716)
Q Consensus 425 ~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~------~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~ 498 (716)
+|.+.........+..|+.+.|.|.+.+.|.+.+.|++++... ....++... ...|.|.++...|.|.|+
T Consensus 211 ~p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~----~~~L~i~~v~~~d~G~Y~ 286 (388)
T 2v5m_A 211 APRTPALVQKPLELMVAHTISLLCPAQGFPAPSFRWYKFIEGTTRKQAVVLNDRVKQV----SGTLIIKDAVVEDSGKYL 286 (388)
T ss_dssp EEECCSSCCCCEEEETTSCEEECCCCEEESCCEEEEEEECTTSSCEEECCCSSSEEEE----TTEEEESSCCGGGCEEEE
T ss_pred CCcCccccCCceEEeeCCcEEEEEECCCCCCCEEEEEecCCCCcccccccccCceecc----cCEEEECcCCHHHCeEEE
Confidence 2332222234567889999999999999999999999974322 122233221 238999999999999999
Q ss_pred EEEEcCCCceeeEEEEEEEE-EEEEEeCCC---CCCCCceeeEEEEEEecCCCceeeeEEEccceeeeeccccceeEEEE
Q psy7040 499 LAVKNSWGTDKGTAKVTVLG-CSLKWNPPE---DDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDNVDYFTKITI 574 (716)
Q Consensus 499 ~~a~n~~g~~~~s~~~~v~~-v~l~W~~p~---~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~i 574 (716)
|.|.|..|.......+.+.. ..+.-.++. ..+......|.+...+. +.+.|++.+..... ....+.|
T Consensus 287 C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~----p~i~W~~~g~~i~~-----~~~~L~i 357 (388)
T 2v5m_A 287 CVVNNSVGGESVETVLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPI----KTVSWMKDGKAIGH-----SESVLRI 357 (388)
T ss_dssp EEEECSSCEEEEEEEEEEEEEEEEEEESSEEEECTTSCEEEEEEEEEECC----CEEEEEETTEECSC-----CSSEEEE
T ss_pred EEEecCCCceeEEEEEEEeCCCccccCCCcEEecCCCCEEEEEEeccccC----CeEEEEECCEECcc-----CCCEEEE
Confidence 99999999988887777762 222222211 22333344555544433 34999998765432 2478999
Q ss_pred cCCCCCCeEEEEEEEEcCCCCCccceee
Q psy7040 575 RPLQRSDTAQYTVTATNSQGKDQVFIEV 602 (716)
Q Consensus 575 ~~L~~~~~y~~~v~a~n~~G~~~~s~~~ 602 (716)
.++...+.+.|+|.|.|..|....+..+
T Consensus 358 ~~v~~~d~G~Y~C~a~N~~G~~~~~~~l 385 (388)
T 2v5m_A 358 ESVKKEDKGMYQCFVRNDRESAEASAEL 385 (388)
T ss_dssp SSCCGGGCEEEEEEEECSSCEEEEEEEE
T ss_pred ecCChhhCEEEEEEEEcCCCcEEEEEEE
Confidence 9999999999999999999976665544
No 107
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.67 E-value=1.2e-16 Score=160.82 Aligned_cols=259 Identities=10% Similarity=0.038 Sum_probs=171.2
Q ss_pred CCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccCCCeEE
Q psy7040 380 DTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKE 459 (716)
Q Consensus 380 ~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~ 459 (716)
....+.|.++...+...|+|.|.|..+. ....+......|. ..+.+|+.+.|.|.+.+.|.+.+.
T Consensus 65 ~~~~L~I~~v~~~D~G~Y~C~~~n~~~~-------~~l~V~~~~~~~~--------~~v~~G~~v~l~C~~~~~p~~~v~ 129 (363)
T 1wio_A 65 GNFPLIIKNLKIEDSDTYICEVEDQKEE-------VQLLVFGLTANSD--------THLLQGQSLTLTLESPPGSSPSVQ 129 (363)
T ss_dssp TCCCEEECSCCGGGCEEEEEEETTEEEE-------EEEEEEEEEESSC--------SSEESBSCEEEEEECCTTCCCCEE
T ss_pred CeEEEEECCCCHHHCEEEEEEEEECCCc-------EEEEEEeCCCCCc--------eEEecCCCEEEEEEcCCCCCCeEE
Confidence 4567999999999999999999887431 1111111111222 246899999999999999999999
Q ss_pred EEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEEEEEEEEEEEEEeCCCC-------CCCC
Q psy7040 460 WLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVLGCSLKWNPPED-------DGGA 532 (716)
Q Consensus 460 W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v~~v~l~W~~p~~-------~~~~ 532 (716)
|++++.... . ....|.|.++...|.|.|+|.|.|..+.......+.+. ..|.. .+..
T Consensus 130 W~~~~~~~~-------~---~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v~------~~p~~~~~~~~~~G~~ 193 (363)
T 1wio_A 130 CRSPRGKNI-------Q---GGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVL------AFQKASSIVYKKEGEQ 193 (363)
T ss_dssp EECSSSCEE-------E---ESSEEEECSBCGGGCEECEEEEEETTEEEEECCEECEE------CCSCSEEEEEEETBCC
T ss_pred EEcCCCccc-------c---cceEEEEeeCChhcCCEEEEEEecCCCeEEEEEEEEEe------cCCCCCCceEEecCCE
Confidence 999875431 1 24489999999999999999999986655554444443 11110 0111
Q ss_pred ceeeEEEEEEecC-CCceeeeEEEccceeeee--------cc---------------ccceeEEEEcCCCCCCeEEEEEE
Q psy7040 533 PIEYYMVEKMETD-TGKVLIKWIRTNDKRVTI--------DN---------------VDYFTKITIRPLQRSDTAQYTVT 588 (716)
Q Consensus 533 ~i~~y~v~~~~~~-~~~~~~~w~~~~~~~~~~--------~~---------------~~~~~~~~i~~L~~~~~y~~~v~ 588 (716)
....|.+...... .+.+.+.|++.+...... .. ......+.|.++...+.+.|+|.
T Consensus 194 v~l~C~~~~~~~~~~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 273 (363)
T 1wio_A 194 VEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLT 273 (363)
T ss_dssp EEEECCCCCCCCSSCEEEEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEEEEEE
T ss_pred EEEEEEEecccccCCCceeEEEecCCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcCcCcEEEEE
Confidence 1112211111111 234557888766543220 00 11124899999999999999999
Q ss_pred EEcC--CCCCccceeeeccCCCCCCccceeeccceeEEEEEEeeEEEEeeeeccCcee----e--EEEEeCCeEeeeccc
Q psy7040 589 ATNS--QGKDQVFIEVVVTDKPSAPEGPIQWLLTLTDVTWEISNYLQELHSSLMPISL----E--SQYLMNDKRVTIDNV 660 (716)
Q Consensus 589 a~n~--~G~~~~s~~~~v~~~p~~~~~~~~~~~~~v~l~w~i~~y~v~~~~~~~~~~~----~--~~W~~~~~~~~~~~~ 660 (716)
|.|. .|.......+.|.. +.+..+. |.|.+.| . +.|+++|..+..+
T Consensus 274 a~n~~~~g~~~~~~~l~V~~----------v~g~~~~--------------l~C~~~g~p~p~~~i~W~~~~~~~~~~-- 327 (363)
T 1wio_A 274 LALEAKTGKLHQEVNLVVMR----------ATQLQKN--------------LTCEVWGPTSPKLMLSLKLENKEAKVS-- 327 (363)
T ss_dssp ECBTTTTCCEEEEEEEEEEE----------ECCCSSS--------------EEEEEESSCCTTCCEEEECSSSSCSEE--
T ss_pred EEEhhhcCeEEEEEeEEEEE----------ecCCCee--------------EEEEEccccCCCccEEEEeCCCceeee--
Confidence 9999 77554444444431 1122333 5566555 4 9999999887654
Q ss_pred ceeeEEEEccCCCCCcEEEEEEEEcCCCCceeeEEEEEe
Q psy7040 661 DYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVT 699 (716)
Q Consensus 661 ~~~~~~~i~~l~~~~~y~y~~~a~n~~G~~~~s~~l~v~ 699 (716)
..|.|.++...|+|.|+|.|.| .|....+..|.|.
T Consensus 328 ---~~l~i~~v~~~d~G~Y~C~a~~-~~~~~~~~~~~V~ 362 (363)
T 1wio_A 328 ---KREKAVWVLNPEAGMWQCLLSD-SGQVLLESNIKVL 362 (363)
T ss_dssp ---ESSSEEEESSCCSEEEEEEECS-SSSCCEEEEEEEC
T ss_pred ---eeeeeeeeccccceeEEEEEec-CCeEEEecceEec
Confidence 6788999999999999999997 5667777777764
No 108
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.67 E-value=5.4e-16 Score=156.11 Aligned_cols=248 Identities=15% Similarity=0.106 Sum_probs=159.8
Q ss_pred cEEEecCCeEEEEEEEeccCCCeEEEEeCCeEec--------------cCCcEEEEe---CCCeEEEEECCCCCCCceeE
Q psy7040 435 DIKVRAGSNFEFDINVIGEPIPTKEWLCNDITII--------------SKDRFKIVN---DDKSTKLKVFDSKRGDSGIY 497 (716)
Q Consensus 435 ~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~--------------~~~~~~~~~---~~~~~~l~i~~l~~~~~~~y 497 (716)
.+.+.+|+.+.|.|.+.+.|.+.+.|++++..+. ...++.+.. ......|.|.++...|.|.|
T Consensus 3 ~v~~~~G~~v~L~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 82 (363)
T 1wio_A 3 VVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTY 82 (363)
T ss_dssp EEEEETTSCEEECCCCTTCSSCCEEEEETTCCEEEEEETTEEEECSSTTGGGEECCHHHHHTTCCCEEECSCCGGGCEEE
T ss_pred eEEEeCCCeEEEEEEecCCCceEEEEEeCCccceeccCccEEecCCcccccceeeeeccccCCeEEEEECCCCHHHCEEE
Confidence 3678899999999999999999999999985321 012222221 23456799999999999999
Q ss_pred EEEEEcCCCceeeEEEEEEEEEEEEEeCCCCCCCCceeeEEEEEEecCCCceeeeEEEccceeeeeccccceeEEEEcCC
Q psy7040 498 TLAVKNSWGTDKGTAKVTVLGCSLKWNPPEDDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDNVDYFTKITIRPL 577 (716)
Q Consensus 498 ~~~a~n~~g~~~~s~~~~v~~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~i~~L 577 (716)
+|.|.|..+ ...+.+..+.+.-......+.. ..+.......+.+.+.|++.+..... ....+.|.++
T Consensus 83 ~C~~~n~~~----~~~l~V~~~~~~~~~~v~~G~~----v~l~C~~~~~p~~~v~W~~~~~~~~~-----~~~~L~i~~v 149 (363)
T 1wio_A 83 ICEVEDQKE----EVQLLVFGLTANSDTHLLQGQS----LTLTLESPPGSSPSVQCRSPRGKNIQ-----GGKTLSVSQL 149 (363)
T ss_dssp EEEETTEEE----EEEEEEEEEEESSCSSEESBSC----EEEEEECCTTCCCCEEEECSSSCEEE-----ESSEEEECSB
T ss_pred EEEEEECCC----cEEEEEEeCCCCCceEEecCCC----EEEEEEcCCCCCCeEEEEcCCCcccc-----cceEEEEeeC
Confidence 999998743 4455555433211101111222 23333333344556999988654321 2478999999
Q ss_pred CCCCeEEEEEEEEcCCCCCccceeeeccCCCCCCccceeeccceeEEEEEEeeEEEEeeeeccCceeeEEEEeCCeEeee
Q psy7040 578 QRSDTAQYTVTATNSQGKDQVFIEVVVTDKPSAPEGPIQWLLTLTDVTWEISNYLQELHSSLMPISLESQYLMNDKRVTI 657 (716)
Q Consensus 578 ~~~~~y~~~v~a~n~~G~~~~s~~~~v~~~p~~~~~~~~~~~~~v~l~w~i~~y~v~~~~~~~~~~~~~~W~~~~~~~~~ 657 (716)
...+.+.|+|.|.|..+.......+.|..+|..+..+....+..+.|.+.+.+..- ...-...+.|+++|..+..
T Consensus 150 ~~~d~G~Y~C~a~~~~~~~~~~~~l~v~~~p~~~~~~~~~~G~~v~l~C~~~~~~~-----~~~P~p~i~W~~~g~~~~~ 224 (363)
T 1wio_A 150 ELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKASSIVYKKEGEQVEFSFPLAFTVE-----KLTGSGELWWQAERASSSK 224 (363)
T ss_dssp CGGGCEECEEEEEETTEEEEECCEECEECCSCSEEEEEEETBCCEEEECCCCCCCC-----SSCEEEEEEEEESSCCCCC
T ss_pred ChhcCCEEEEEEecCCCeEEEEEEEEEecCCCCCCceEEecCCEEEEEEEEecccc-----cCCCceeEEEecCCCCccc
Confidence 99999999999999766544444454555555443122223445554432211000 0000127899999977654
Q ss_pred c-------c-----------------cceeeEEEEccCCCCCcEEEEEEEEcC--CCCceeeEEEEEec
Q psy7040 658 D-------N-----------------VDYFTKITIRPLQRSDTAQYTVTATNS--QGKDQVFIEVVVTD 700 (716)
Q Consensus 658 ~-------~-----------------~~~~~~~~i~~l~~~~~y~y~~~a~n~--~G~~~~s~~l~v~~ 700 (716)
. . ......|.|.++...|+|.|+|.|.|. .|.......|.|..
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~~~~l~V~~ 293 (363)
T 1wio_A 225 SWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMR 293 (363)
T ss_dssp CEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEEEEEEECBTTTTCCEEEEEEEEEEE
T ss_pred eEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcCcCcEEEEEEEEhhhcCeEEEEEeEEEEE
Confidence 1 0 111348999999999999999999999 99888888888764
No 109
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.66 E-value=2.6e-15 Score=143.53 Aligned_cols=230 Identities=15% Similarity=0.122 Sum_probs=154.4
Q ss_pred cEEEecCCeEEEEEEEeccCCC-eEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEEE
Q psy7040 435 DIKVRAGSNFEFDINVIGEPIP-TKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAK 513 (716)
Q Consensus 435 ~~~~~~g~~~~~~~~v~~~p~~-~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~ 513 (716)
.+.+.+|+.+.|.|.+.+.|.+ .+.|++++..+... ...|.|.++...|.|.|+|.|.|..+.......
T Consensus 10 ~~~v~~G~~v~l~C~~~~~~~~~~~~W~~~g~~~~~~----------~~~l~i~~~~~~d~G~Y~C~~~~~~~s~~~~l~ 79 (262)
T 3rjd_A 10 WVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQTS----------TPSYRITSASVNDSGEYRCQRGLSGRSDPIQLE 79 (262)
T ss_dssp CSEEETTCCEEEEEECSSCCCTTCEEEEETTEECSCC----------SSEEEESSCCGGGCEEEEEEESSSCCCCCEEEE
T ss_pred cEEeeCCCeEEEEEECCCCCCCceEEEEECCEEeecc----------CCeEEEecCCcccCeEEEEEEecCCccccEEEE
Confidence 4578899999999999999888 99999999887432 447899999999999999999987765543333
Q ss_pred EEEEEEEEEEeCCC-CCCCCceeeEEEEEEe-cCCCceeeeEEEccceeeeeccccceeEEEEcCCCCCCeEEEEEEEEc
Q psy7040 514 VTVLGCSLKWNPPE-DDGGAPIEYYMVEKME-TDTGKVLIKWIRTNDKRVTIDNVDYFTKITIRPLQRSDTAQYTVTATN 591 (716)
Q Consensus 514 ~~v~~v~l~W~~p~-~~~~~~i~~y~v~~~~-~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n 591 (716)
+....+.+.-.... ..+.. ..+.... ...+.+.+.|++.+...... .....+.|.++...+.+.|+|.|.|
T Consensus 80 v~~~~~~~~~~~~~~~~g~~----v~l~C~~~~~~p~~~v~W~~~g~~~~~~---~~~~~l~i~~~~~~d~G~Y~C~~~n 152 (262)
T 3rjd_A 80 IHRGWLLLQVSSRVFTEGEP----LALRCHAWKDKLVYNVLYYRNGKAFKFF---HWNSNLTILKTNISHNGTYHCSGMG 152 (262)
T ss_dssp EECSSEEEEESCSEEETTSC----EEEEEEEGGGCCCEEEEEEETTEEEEEE---EECCCEEESSCCGGGCEEEEEEEES
T ss_pred EeccceEecCCCeEEecCCe----EEEEEEccCCCCCceEEEEECCcccccc---CCCCeEEEEECChhhCEEEEEEEeC
Confidence 32212222211111 11222 2233333 23345569999887655422 1236799999999999999999999
Q ss_pred CCCCCccceeeeccCCCCCCccce------eeccceeEEEEEEeeEEEEeeeeccCcee---------eEEEEeCCeEee
Q psy7040 592 SQGKDQVFIEVVVTDKPSAPEGPI------QWLLTLTDVTWEISNYLQELHSSLMPISL---------ESQYLMNDKRVT 656 (716)
Q Consensus 592 ~~G~~~~s~~~~v~~~p~~~~~~~------~~~~~~v~l~w~i~~y~v~~~~~~~~~~~---------~~~W~~~~~~~~ 656 (716)
..|.......+.|..++..|. +. ...+..+. |.|.+.+ .+.|++++..+.
T Consensus 153 ~~~~~~~~~~l~V~~~~~~p~-~~~~~~~~~~~g~~~~--------------l~C~~~~~p~~p~~~~~~~w~~~~~~~~ 217 (262)
T 3rjd_A 153 KHRYTSAGISVTVKELFPAPV-LNASVTSPLLEGNLVT--------------LSCETKLLLQRPGLQLYFSFYMGSKTLR 217 (262)
T ss_dssp SSEEEEECEEEEEECSSCCCE-EEESSCSSEETTCCEE--------------EEEECCCCCC-----EEEEEEETTEEEE
T ss_pred CCCccccceEEEeccCCCCCe-EeecCceeecCCCeEE--------------EEeEcccCCCCCCccEEEEEEeCCcEec
Confidence 886555545555554333332 21 12234444 4444433 478999999887
Q ss_pred ecccceeeEEEEccCCCCCcEEEEEEEEcCCCCc-eeeEEEEE
Q psy7040 657 IDNVDYFTKITIRPLQRSDTAQYTVTATNSQGKD-QVFIEVVV 698 (716)
Q Consensus 657 ~~~~~~~~~~~i~~l~~~~~y~y~~~a~n~~G~~-~~s~~l~v 698 (716)
.. .....|.|.++..+|.|.|+|.|.|..|.. ..+..+.|
T Consensus 218 ~~--~~~~~L~i~~v~~~d~G~Y~C~a~n~~G~~~~~s~~~~l 258 (262)
T 3rjd_A 218 GR--NTSSEYQILTARREDSGLYWCEAATEDGNVLKRSPELEL 258 (262)
T ss_dssp EE--ESCCEEEESSCCGGGCEEEEEEEEETTSSCEEECCCEEE
T ss_pred cc--CCCceEEEEEechhhCeEEEEEEEcccCceEEecCCeEE
Confidence 54 234689999999999999999999999976 33333433
No 110
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.65 E-value=3.8e-15 Score=156.64 Aligned_cols=95 Identities=32% Similarity=0.594 Sum_probs=85.9
Q ss_pred CCCCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCCcEEEecccCCCeEEecCCCCCcEEEEEEEEEecC
Q psy7040 54 GLDPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETGVWIPVGKTREPEMDVTGLTPGHEYKFRVKALNKE 133 (716)
Q Consensus 54 ~~~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~~~~ 133 (716)
++.||+.+.+.+++.++++|+|.+|..++|++|.+|.|+++..++..|..+.....+.+++.||.+|..|.|||+|.|..
T Consensus 9 ~P~pP~~P~v~~~~~~sv~L~W~~P~~DGgs~I~~Y~vE~~~~~~~~W~~v~~~~~t~~~V~~L~~g~~Y~FRV~A~N~~ 88 (573)
T 3uto_A 9 EPEPPRFPIIENILDEAVILSWKPPALDGGSLVTNYTIEKREAMGGSWSPCAKSRYTYTTIEGLRAGKQYEFRIIAENKH 88 (573)
T ss_dssp CCCCCEEEEEEEECSSCEEEEEECCSCCSSSCCCEEEEEEEESSSCCCEEEEEESSSEEEECCCCTTCEEEEEEEEEETT
T ss_pred CCccCCCCEEEEeeCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEeccccCCEEEeCCCCCCCcEeEEEEEEcCc
Confidence 34455557899999999999999999899999999999999999999999988888999999999999999999999999
Q ss_pred ccCCCccccceEEec
Q psy7040 134 GESEPLETFSSIIAR 148 (716)
Q Consensus 134 g~~~~s~~~~~~~~~ 148 (716)
|.|.+|.....+...
T Consensus 89 G~s~PS~~s~~v~~~ 103 (573)
T 3uto_A 89 GQSKPCEPTAPVLIP 103 (573)
T ss_dssp EECCCCCCCCCEECC
T ss_pred eEcCCcCCCCCEEcC
Confidence 999999887776653
No 111
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.65 E-value=1.5e-15 Score=152.12 Aligned_cols=253 Identities=14% Similarity=0.093 Sum_probs=140.4
Q ss_pred cccEEEecCCeEEEEEEEeccCC-----------CeEEEEeCCeE------ec-cCCcEEEEeCCCeEEEEECCCCCCCc
Q psy7040 433 LSDIKVRAGSNFEFDINVIGEPI-----------PTKEWLCNDIT------II-SKDRFKIVNDDKSTKLKVFDSKRGDS 494 (716)
Q Consensus 433 ~~~~~~~~g~~~~~~~~v~~~p~-----------~~~~W~~~~~~------~~-~~~~~~~~~~~~~~~l~i~~l~~~~~ 494 (716)
...+.+.+|+.+.|.|.+.+.|. +.+.|++++.. +. .....++... ...|.|.++...|.
T Consensus 14 ~~~v~v~~G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~--~~~L~i~~~~~~D~ 91 (349)
T 4dep_C 14 MRQIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKE--KDVLWFRPTLLNDT 91 (349)
T ss_dssp CCCCEEETTSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCEEEE--TTEEEESSCCGGGC
T ss_pred eeeEEEecCCeEEEEccccccccccccccccCCCceEEEEECCCCCcccccccccccCceEeec--CCEEEEccCChhhC
Confidence 45678999999999999987654 89999998732 11 0011112222 23799999999999
Q ss_pred eeEEEEEEcCCCceeeEEEEEEEEEEEEEeCCCCCCCC----------ceeeEEEEEEe-----cCCCceeeeEEEccce
Q psy7040 495 GIYTLAVKNSWGTDKGTAKVTVLGCSLKWNPPEDDGGA----------PIEYYMVEKME-----TDTGKVLIKWIRTNDK 559 (716)
Q Consensus 495 ~~y~~~a~n~~g~~~~s~~~~v~~v~l~W~~p~~~~~~----------~i~~y~v~~~~-----~~~~~~~~~w~~~~~~ 559 (716)
|.|+|.|.|..|....+..+.+.. ++...... .-..-.+.... .+.+.+.+.|++.+..
T Consensus 92 G~Y~C~a~n~~~~~~~~~~l~V~~------~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~ 165 (349)
T 4dep_C 92 GNYTCMLRNTTYCSKVAFPLEVVQ------KDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYK 165 (349)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEEC------CCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEE
T ss_pred EEEEEEEecCCceEEEEEEEEEec------CCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEE
Confidence 999999999988877777666651 11100000 00112333321 2245667999998765
Q ss_pred eeeec-cccceeEEEEcCCCCCCeEEEEEEEEcCC-CCC---ccceeeeccCCCC---CCccceeecccee-EEEEEEee
Q psy7040 560 RVTID-NVDYFTKITIRPLQRSDTAQYTVTATNSQ-GKD---QVFIEVVVTDKPS---APEGPIQWLLTLT-DVTWEISN 630 (716)
Q Consensus 560 ~~~~~-~~~~~~~~~i~~L~~~~~y~~~v~a~n~~-G~~---~~s~~~~v~~~p~---~~~~~~~~~~~~v-~l~w~i~~ 630 (716)
..... .......+.|.++...+.+.|+|.|.|.. |.. .....+.|..++. .|. +.......+ .+. .|
T Consensus 166 l~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~~~~p~-i~~~~~~~~~~v~---~G 241 (349)
T 4dep_C 166 IQNFNNVIPEGMNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPV-IHSPNDHVVYEKE---PG 241 (349)
T ss_dssp CCSCSSEEEETTEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGGCCSCE-EC----------------
T ss_pred CCCccceeecCCEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCCCCCCe-EecCCCceeEEEe---cC
Confidence 53211 11123579999999999999999999987 433 2333333443322 233 222221110 111 12
Q ss_pred EEEEeeeeccCce----e----eEEEEeCCeEeeec----------------ccceeeEEEEccCCCCCc-EEEEEEEEc
Q psy7040 631 YLQELHSSLMPIS----L----ESQYLMNDKRVTID----------------NVDYFTKITIRPLQRSDT-AQYTVTATN 685 (716)
Q Consensus 631 y~v~~~~~~~~~~----~----~~~W~~~~~~~~~~----------------~~~~~~~~~i~~l~~~~~-y~y~~~a~n 685 (716)
-.+ .|.|.+. | .+.|+++|..+... .......|.|.++...|. |.|+|.|.|
T Consensus 242 ~~v---~l~C~~~~~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N 318 (349)
T 4dep_C 242 EEL---LIPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARS 318 (349)
T ss_dssp ------CCCEEEEECCCTTCCCEEEEESSCC--------CCCCEEEECCTTCCEEEEECC-------------CEEEEEC
T ss_pred CcE---EEEEEEEEccCCCCCCEEEEEECCEEccccCCccccccceeeecCCCcEEEEEEEEeeccHHHcCCcEEEEEEc
Confidence 222 3777777 3 89999999887661 011124599999999999 999999999
Q ss_pred CCCCceeeEEEEEec
Q psy7040 686 SQGKDQVFIEVVVTD 700 (716)
Q Consensus 686 ~~G~~~~s~~l~v~~ 700 (716)
..|....++.|.|..
T Consensus 319 ~~G~~~~~~~l~v~~ 333 (349)
T 4dep_C 319 AKGEVAKAAKVKQKV 333 (349)
T ss_dssp SSCEEEEECC-----
T ss_pred CCCcEEEEEEEeeec
Confidence 999999888888854
No 112
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.64 E-value=3.2e-14 Score=137.79 Aligned_cols=231 Identities=19% Similarity=0.238 Sum_probs=160.3
Q ss_pred CceEEEEecCCccEEEEeccccCcceEEEEEEEeCCCCceeEEEEEEecCCCCCCCC-eEEeEEeCCeEEEEEECCCCCC
Q psy7040 173 GMVRKVQHLDYNTKLGVRMAQRADAGFYTVTAENINGKDSVEVEVIVLDKPSPPGGP-LKVSNVHAEGVTLDWKVPDDDG 251 (716)
Q Consensus 173 ~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~~p~~~-~~~~~~~~~~~~l~W~~p~~~~ 251 (716)
..++.+........|.|.+++..|+|.|+|.|.|..|..+..+.|.|..+|.....+ -......+..+.|.|.....
T Consensus 49 ~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~-- 126 (284)
T 2rik_A 49 GGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGS-- 126 (284)
T ss_dssp SSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCEEEECCCSEEEEETTCCEEEEEEEESS--
T ss_pred CCcEEEEEcCCEEEEEEecCCcccCEEEEEEEEECCceEEEEEEEEccCCCcccccCCCceEecCCceEEEEEEEeee--
Confidence 344555555667899999999999999999999999998889999998877432211 12334567889999986322
Q ss_pred CCccceEEEEEEe--CCCCCeEEccccCcccceEEEcCCCCCCeEEEEEEEEcCCCCCCCCcccceEEecCCCCCCCCCC
Q psy7040 252 GQPIEKYVVDKMD--EATGRWTPAGETEGPVTGLEVEGLIPNHKYKFRVRAVNKQGKSEPLTTTASIEAKNPFNQPGKPG 329 (716)
Q Consensus 252 ~~~~~~y~v~~~~--~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~ 329 (716)
+...+.+.... ........... ......+.|.++...+.+.|+|.|.|..|....
T Consensus 127 --p~~~v~W~~~~~~~~~~~~~~~~~-~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~-------------------- 183 (284)
T 2rik_A 127 --PEIKVLWYKDETEIQESSKFRMSF-VESVAVLEMYNLSVEDSGDYTCEAHNAAGSASS-------------------- 183 (284)
T ss_dssp --SCCEEEEEETTEECCCSSSEEEEE-ETTEEEEEECSCCGGGCEEEEEEEECSSCEEEE--------------------
T ss_pred --CCCEEEEEECCEECcCCCcEEEEE-cCCEEEEEECCCCcccCEEEEEEEEcCCCceeE--------------------
Confidence 22233332211 01111111110 123467889999999999999999886542100
Q ss_pred CcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEEeCCCCCC
Q psy7040 330 TPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGE 409 (716)
Q Consensus 330 ~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~ 409 (716)
.+.|.-..
T Consensus 184 ----------~~~l~V~~-------------------------------------------------------------- 191 (284)
T 2rik_A 184 ----------STSLKVKE-------------------------------------------------------------- 191 (284)
T ss_dssp ----------EEEEEEEC--------------------------------------------------------------
T ss_pred ----------EEEEEEec--------------------------------------------------------------
Confidence 00000000
Q ss_pred CCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCC
Q psy7040 410 PSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDS 489 (716)
Q Consensus 410 ~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l 489 (716)
+|.+. ..+....+..|..+.|.|.+.+.|.+.+.|++++..+....++.+...+....|.|.++
T Consensus 192 ---------------~p~~~-~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v 255 (284)
T 2rik_A 192 ---------------PPVFR-KKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNV 255 (284)
T ss_dssp ---------------CCBCC-SCCCCEEECTTCCEEEEEECBSSSCCEEEEEETTEEECBTTTEEEEEETTEEEEEECSC
T ss_pred ---------------CCcce-eCCCcceecCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEEcCC
Confidence 00000 00123456778889999999999999999999999998888888888887889999999
Q ss_pred CCCCceeEEEEEEcCCCceeeEEEEEE
Q psy7040 490 KRGDSGIYTLAVKNSWGTDKGTAKVTV 516 (716)
Q Consensus 490 ~~~~~~~y~~~a~n~~g~~~~s~~~~v 516 (716)
...|.|.|+|.|.|..|....+..+.+
T Consensus 256 ~~~d~G~Y~C~a~N~~G~~~~~~~l~V 282 (284)
T 2rik_A 256 DSADIGEYQCKASNDVGSYTCVGSITL 282 (284)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CcccCEEEEEEEEeCCCceeEEEEEEE
Confidence 999999999999999999888887765
No 113
>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A
Probab=99.64 E-value=7e-15 Score=135.40 Aligned_cols=190 Identities=13% Similarity=0.122 Sum_probs=129.9
Q ss_pred CCCCCCceEE--EE-eCCeEEEEecCCCCCCCCccceEEEEEEcCCC------CcEEEeccc---CCCeEEecCCCCCcE
Q psy7040 55 LDPEGPLEVS--NI-HKDGCTLKWNKPKDDGGEPLEGYLVEKYDPET------GVWIPVGKT---REPEMDVTGLTPGHE 122 (716)
Q Consensus 55 ~~p~~~l~~~--~~-~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~------~~~~~~~~~---~~~~~~i~~L~~~~~ 122 (716)
.+|..|..+. .. ..+++.++|+++.. ++. ...|.|+|+.... ..+..+... ....+.+.+|.+++.
T Consensus 3 ~pP~~P~~l~c~~~~~~~~~~~~W~p~~~-~~~-~~~Y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~ 80 (215)
T 1cd9_B 3 YPPASPSNLSCLMHLTTNSLVCQWEPGPE-THL-PTSFILKSFRSRADCQYQGDTIPDCVAKKRQNNCSIPRKNLLLYQY 80 (215)
T ss_dssp CCCCCCEEEEEEEETTTTEEEEEEECCSC-CSS-CCEEEEEEEECCGGGCSCCCEEEEEECCTTCCEEEEEGGGCCTTSC
T ss_pred CCCCCCeeeeeecCCCcccEEEEecCCCC-CCC-ceeEEEEEEecCCcccccccccccCCCCCCCcEEEECCcccccceE
Confidence 3455554444 44 46799999998864 444 4679999986542 234444321 125677889999999
Q ss_pred EEEEEEEEecCccCCCccccceEEecCCCCcccccccccceecccCCCCCCceEEEEecCCccEEEEeccccCcceEEEE
Q psy7040 123 YKFRVKALNKEGESEPLETFSSIIARDPYSKYTSVSSLDSHKRSNQPCGSGMVRKVQHLDYNTKLGVRMAQRADAGFYTV 202 (716)
Q Consensus 123 y~~~v~a~~~~g~~~~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~G~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c 202 (716)
|.|+|.|.|..|.+.+... . +...+
T Consensus 81 Y~~~V~A~N~~G~~~s~~~-~-~~~~~----------------------------------------------------- 105 (215)
T 1cd9_B 81 MAIWVQAENMLGSSESPKL-C-LDPMD----------------------------------------------------- 105 (215)
T ss_dssp EEEEEEEEETTEEEECCCE-E-ECGGG-----------------------------------------------------
T ss_pred EEEEEEEECCCCCccCccE-E-EchHH-----------------------------------------------------
Confidence 9999999999886532111 0 00000
Q ss_pred EEEeCCCCceeEEEEEEecCCCCCCCCeEEeEE------eCCeEEEEEECCCCCCCCccceEEEEEE-eCCCCCeEEccc
Q psy7040 203 TAENINGKDSVEVEVIVLDKPSPPGGPLKVSNV------HAEGVTLDWKVPDDDGGQPIEKYVVDKM-DEATGRWTPAGE 275 (716)
Q Consensus 203 ~a~n~~g~~~~~~~~~v~~~p~~p~~~~~~~~~------~~~~~~l~W~~p~~~~~~~~~~y~v~~~-~~~~~~~~~~~~ 275 (716)
..+|.+|.+ +.+... ..+++.|+|++|.. ++..+..|.|+++ ..+...|.....
T Consensus 106 -----------------~v~p~pP~~-~~~~~~~~~~~~~~~~~~l~W~~p~~-~~~~~l~Y~v~y~~~~~~~~w~~~~~ 166 (215)
T 1cd9_B 106 -----------------VVKLEPPML-QALDIGPDVVSHQPGCLWLSWKPWKP-SEYMEQECELRYQPQLKGANWTLVFH 166 (215)
T ss_dssp -----------------GBCCCCCEE-EECCC-------CCSCEEEEEECCGG-GTTSCEEEEEEEEESSTTCCCEEEEE
T ss_pred -----------------ceEeCCCcE-EEEEEeccccCCCCCeEEEEEeCCCC-CCeEEEEEEEEEccCCCCCCcEEEec
Confidence 025777776 666654 57789999998865 3434479999998 667777876533
Q ss_pred cCcccceEEEcCCCCCCeEEEEEEEEcCCCCCCCCcccceEEecC
Q psy7040 276 TEGPVTGLEVEGLIPNHKYKFRVRAVNKQGKSEPLTTTASIEAKN 320 (716)
Q Consensus 276 ~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~~~~~~~~~~~~ 320 (716)
.......+.|.+|.|++.|.|+|+|.+..|.+.++..+..+.+.+
T Consensus 167 ~~~~~~~~~l~~L~p~t~Y~~~Vra~~~~g~G~wS~wS~~~~~~T 211 (215)
T 1cd9_B 167 LPSSKDQFELCGLHQAPVYTLQMRCIRSSLPGFWSPWSPGLQLRP 211 (215)
T ss_dssp EESCEEEEEECCCCSCSCEEEEEEEEESSSCCCCCCCCCCEEECC
T ss_pred ccCcceEEEEcCCCCCCEEEEEEEeeECCCCCCCcCCCCccceec
Confidence 334567899999999999999999999888776666665565554
No 114
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.64 E-value=1.4e-15 Score=147.72 Aligned_cols=243 Identities=16% Similarity=0.095 Sum_probs=150.6
Q ss_pred CCcccccccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcC
Q psy7040 425 SPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNS 504 (716)
Q Consensus 425 ~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~ 504 (716)
+|.+. .....+.+.+|+.+.|.|.+.+ .+.|++++..+ ...... ...|.|.++...|.|.|+|.|.|
T Consensus 12 ~P~i~-~~~~~~~v~~G~~v~l~C~~~~----~i~W~~~~~~~-----~~~~~~--~~~L~i~~~~~~d~G~Y~C~~~n- 78 (290)
T 2o26_X 12 PPSIH-PAQSELIVEAGDTLSLTCIDPD----FVRWTFKTYFN-----EMVENK--KNEWIQEKAEATRTGTYTCSNSN- 78 (290)
T ss_dssp CCEES-SCSSEEEEETTSCEEEEEECTT----EEEEEEECSSS-----CEEEEC--SSEEEETTCCGGGCEEEEEEESS-
T ss_pred CCEEe-CCCCeEEEcCCCcEEEEECCCC----cEEEecCCcce-----eeecCC--CceEEEeccCHHhCeEEEEEeeC-
Confidence 56555 3456788999999999999887 89999998765 111122 26899999999999999999999
Q ss_pred CCceeeEEEEEEEEEEEEEeCCC----CCCCCceeeEEEEEEecCCCc-eeeeEEE-ccceeeeec--cccceeEEEEcC
Q psy7040 505 WGTDKGTAKVTVLGCSLKWNPPE----DDGGAPIEYYMVEKMETDTGK-VLIKWIR-TNDKRVTID--NVDYFTKITIRP 576 (716)
Q Consensus 505 ~g~~~~s~~~~v~~v~l~W~~p~----~~~~~~i~~y~v~~~~~~~~~-~~~~w~~-~~~~~~~~~--~~~~~~~~~i~~ 576 (716)
|. ..++.+.+.........+. ..+.. ..+..... .+. +.+.|+. .+....... .......+.|.+
T Consensus 79 -g~-~~~~~l~V~~~~~~~~~~~~~~~~~g~~----v~l~C~~~-~p~~~~v~W~~~~g~~l~~~~~~~~~~~~~L~i~~ 151 (290)
T 2o26_X 79 -GL-TSSIYVFVRDPAKLFLVGLPLFGKEDSD----ALVRCPLT-DPQVSQYSLIECDGKSLPTDLTFVPNPKAGITIKN 151 (290)
T ss_dssp -SC-EEEEEEEEECSSCCBCCCCCEEEETTSC----EEECCCBS-CCSCEEEEEEETTSCCCCTTCEEEEETTTEEEEES
T ss_pred -Cc-cEEEEEEEeCCCcccccccceEEecCCe----EEEeCcCC-CCCCceEEEEeCCCcCCCCCCceeeCCCCCEEEec
Confidence 54 4445554440000000000 00111 12222222 244 6689954 443321110 111225789999
Q ss_pred CCCCCeE-EEEEEEEcCCCCCcc-ceeeeccCCC-CCCccce-------eeccceeEEEEEEeeEEEEeeeeccCcee--
Q psy7040 577 LQRSDTA-QYTVTATNSQGKDQV-FIEVVVTDKP-SAPEGPI-------QWLLTLTDVTWEISNYLQELHSSLMPISL-- 644 (716)
Q Consensus 577 L~~~~~y-~~~v~a~n~~G~~~~-s~~~~v~~~p-~~~~~~~-------~~~~~~v~l~w~i~~y~v~~~~~~~~~~~-- 644 (716)
+...+.+ .|+|.|.|..|.... ...+.|...+ ..|. +. ...+..+. |.|.+.|
T Consensus 152 v~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~P~-i~~~~~~~~v~~G~~v~--------------l~C~~~g~p 216 (290)
T 2o26_X 152 VKRAYHRLCVRCAAQRDGTWLHSDKFTLKVREAIKAIPV-VSVPETSHLLKKGDTFT--------------VVCTIKDVS 216 (290)
T ss_dssp CCGGGTTCEEEEEEEETTEEEECCCEEEEEECCCCSCCE-EECSCSBCCCCTTCCEE--------------EEEEEEESS
T ss_pred ccHHHCCCEEEEEEEECCceEEeEEEEEEEEeCCCCCCc-cccCCCcceEecCCcEE--------------EEEEEecCC
Confidence 9999999 999999998554221 2333343211 2222 21 11133333 6666666
Q ss_pred ---eEEEEeCCeEe----eec---------ccceeeEEEEccCCCCCcEEEEEEEEcCCCCceeeEEEEEecCC
Q psy7040 645 ---ESQYLMNDKRV----TID---------NVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTDKP 702 (716)
Q Consensus 645 ---~~~W~~~~~~~----~~~---------~~~~~~~~~i~~l~~~~~y~y~~~a~n~~G~~~~s~~l~v~~~p 702 (716)
.+.|++++..+ ... .......|.|.++...|+|.|+|.|.|..|....+..|.|..+|
T Consensus 217 ~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P 290 (290)
T 2o26_X 217 TSVNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNTFGSANVTTTLKVVEKG 290 (290)
T ss_dssp TTCEEEEEEESSSEEECCCEECCEEEEETTEEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEECC----
T ss_pred cceeEEEecCCCCCccceeecccccccCceeeEEEEEEEEcCCCcccCeEEEEEEeCCCCcEEEEEEEEEEeCC
Confidence 39999998773 111 12234789999999999999999999999999999999988765
No 115
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.64 E-value=5.7e-15 Score=146.16 Aligned_cols=242 Identities=11% Similarity=0.003 Sum_probs=156.5
Q ss_pred ccEEEecCCeEEEEEEEecc---------CCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCce-eEEEEEEc
Q psy7040 434 SDIKVRAGSNFEFDINVIGE---------PIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSG-IYTLAVKN 503 (716)
Q Consensus 434 ~~~~~~~g~~~~~~~~v~~~---------p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~-~y~~~a~n 503 (716)
..+.+.+|+.+.|.|.+.+. |.+.+.|++++..+....+. .. ...|.|.++...|.| .|+|.|.|
T Consensus 37 ~~v~v~eG~~v~L~C~~~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~-~~----~~~L~i~~v~~~D~Gs~Y~C~a~n 111 (329)
T 3oq3_B 37 MNDMAALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRPLNRR-VK----NGDLWIANYTSNDSHRRYLCTVTT 111 (329)
T ss_dssp EEEEECTTSCEEECCHHHHCTTTGGGSCCTTCEEEEEECSSSCEECSTT-EE----TTEEEESSCCGGGGGCCEEEEEEC
T ss_pred ceEEEECCCeEEEEccCCCCccccccccCCCCeeEEEECCCCccccCce-ee----cceEEEcCCChHhCCCcEEEEEEe
Confidence 45678999999999999884 55789999998766543322 11 348999999999999 99999999
Q ss_pred CCCceeeEEEEEEE-----EEEEEEeCCCCCCCCceeeEEEEEEecCCC-ceeeeEEEccceeeeec--cccceeEEEEc
Q psy7040 504 SWGTDKGTAKVTVL-----GCSLKWNPPEDDGGAPIEYYMVEKMETDTG-KVLIKWIRTNDKRVTID--NVDYFTKITIR 575 (716)
Q Consensus 504 ~~g~~~~s~~~~v~-----~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~-~~~~~w~~~~~~~~~~~--~~~~~~~~~i~ 575 (716)
..|.........+. .+.-.-......+.. ..+.....+.+ .+.+.|++.+....... .......+.|.
T Consensus 112 ~~g~~~~~~~~~v~~~~p~~~~~~~~~~~~~G~~----v~L~C~~~g~p~~~~i~W~k~~~~l~~~~~~~~~~~~~L~I~ 187 (329)
T 3oq3_B 112 KNGDCVQGIVRSHIRKPPSCIPETYELGTHDKYG----IDLYCGILYAKHYNNITWYKNNQELIIDGTKYSQSGQNLIIH 187 (329)
T ss_dssp TTSCEEEEEEEEEECCCCSCEEEEEETTSSTTTC----EEEECCCCSCCCCCEEEEEETTEECCCSSSSEEEETTEEEEC
T ss_pred CCCceeeEEEEEEEcCCCcEeccccceEEeCCCc----EEEEeccCCCCCCceEEEEECCccCCCCCceEecCCCEEEEe
Confidence 99875444322222 000000011111122 23333333334 56699999876542110 11113789999
Q ss_pred CCCCCCeEEEEEEEEcC--CCCCccc----eeeeccCCCCC------CccceeeccceeEEEEEEeeEEEEeeeeccCce
Q psy7040 576 PLQRSDTAQYTVTATNS--QGKDQVF----IEVVVTDKPSA------PEGPIQWLLTLTDVTWEISNYLQELHSSLMPIS 643 (716)
Q Consensus 576 ~L~~~~~y~~~v~a~n~--~G~~~~s----~~~~v~~~p~~------~~~~~~~~~~~v~l~w~i~~y~v~~~~~~~~~~ 643 (716)
++...+.+.|+|.|.|. .|..... ..+.|..+|.. |.......+..+.| .|.+.
T Consensus 188 ~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~v~~G~~~~l--------------~C~~~ 253 (329)
T 3oq3_B 188 NPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDHRFKLILDPKINVTIGEPANI--------------TCTAV 253 (329)
T ss_dssp SCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCCCCEEEECCSEEEECTTSCEEE--------------EEEEE
T ss_pred ecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECCCCCCCceecCCeeEEecCCCEEE--------------EEEEE
Confidence 99999999999999997 6544433 22335444422 11011222444544 44444
Q ss_pred e--------eEEEEeCCeEeeeccc-----------ceeeEEEEccCCCCCcE-EEEEEEEcCCCCceeeEEEEE
Q psy7040 644 L--------ESQYLMNDKRVTIDNV-----------DYFTKITIRPLQRSDTA-QYTVTATNSQGKDQVFIEVVV 698 (716)
Q Consensus 644 ~--------~~~W~~~~~~~~~~~~-----------~~~~~~~i~~l~~~~~y-~y~~~a~n~~G~~~~s~~l~v 698 (716)
| .+.|+++|..+..... .....|.|.++...|.| .|+|.|.|..|....+..|.|
T Consensus 254 g~p~~~~~i~v~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~~Y~C~a~N~~G~~~~~~~l~v 328 (329)
T 3oq3_B 254 STSLLVDDVLIDWENPSGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNYYFDKTLTTTVVL 328 (329)
T ss_dssp ETTCCTTCCEEEEECTTSCBCCBCSSEEEEEEEETTEEEEEEEESSCCGGGTTCEEEEEEECSSCEEEEEEEEEE
T ss_pred ECCCCCCCcEEEEEECCeeeeccCCceeeeecccCceeEeEEEEEeccHHHCCCcEEEEEEecCCceEEEEEEEe
Confidence 3 5699999887533211 13478999999999999 999999999999988888776
No 116
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.63 E-value=5.1e-15 Score=147.02 Aligned_cols=261 Identities=10% Similarity=0.119 Sum_probs=161.4
Q ss_pred cccccEEEecCCeEEEEEEEecc----CCCeEEEEeCC--eE-------------e--ccCCcEEEE-eCCCeEEEEECC
Q psy7040 431 DQLSDIKVRAGSNFEFDINVIGE----PIPTKEWLCND--IT-------------I--ISKDRFKIV-NDDKSTKLKVFD 488 (716)
Q Consensus 431 ~~~~~~~~~~g~~~~~~~~v~~~----p~~~~~W~~~~--~~-------------~--~~~~~~~~~-~~~~~~~l~i~~ 488 (716)
..+..+.+..|+.+.|.|.+.+. +.+.+.|++++ .. . ....++.+. .......|.|.+
T Consensus 19 ~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~ 98 (331)
T 3u83_A 19 QVNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGTIRLSR 98 (331)
T ss_dssp --CEEEEEETTCCEEECCBCSSCCSSCEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESSCSSSBCCEEECS
T ss_pred EcCCcEEEEecCCEEEeeecCCCCCCCceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecccCCCCceEEEcc
Confidence 44556889999999999999876 55579999954 11 1 112333332 122456799999
Q ss_pred CCCCCceeEEEE-EEcCCCceeeEEEEEEE---EEEEEEeCCC--CCCCCceeeEEEEEE-ecCCCceeeeEEEccceee
Q psy7040 489 SKRGDSGIYTLA-VKNSWGTDKGTAKVTVL---GCSLKWNPPE--DDGGAPIEYYMVEKM-ETDTGKVLIKWIRTNDKRV 561 (716)
Q Consensus 489 l~~~~~~~y~~~-a~n~~g~~~~s~~~~v~---~v~l~W~~p~--~~~~~~i~~y~v~~~-~~~~~~~~~~w~~~~~~~~ 561 (716)
+...|.|.|+|. +.|..|.......+.+. .+.+.-..+. ...|.......+... ....+.+.+.|++......
T Consensus 99 v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~ 178 (331)
T 3u83_A 99 LELEDEGVYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETRLKGEA 178 (331)
T ss_dssp CCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCCEEEEEESSCCEE
T ss_pred cCcccCcEEEEEEEecCCCccEEEEEEEEecCCcceeecCCCceeecCCCccceEEEEEEecCCcCCceEEEEcCCCCcc
Confidence 999999999998 56667777777777766 2222222211 001100011233332 2223445599998533221
Q ss_pred ee--cc-cc----ceeEEEEcCCCCCCeEEEEEEEEcCCCCCccceeeeccCCCCCC----ccceeeccceeEEEEEEee
Q psy7040 562 TI--DN-VD----YFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTDKPSAP----EGPIQWLLTLTDVTWEISN 630 (716)
Q Consensus 562 ~~--~~-~~----~~~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~~~~v~~~p~~~----~~~~~~~~~~v~l~w~i~~ 630 (716)
.. .. .. ....+.|..+...+.+.|+|.|.|..|....+..+.|..+|... .......+..+.
T Consensus 179 ~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~~~------- 251 (331)
T 3u83_A 179 EYQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQYEPEVTIEGFDGNWYLQRMDVK------- 251 (331)
T ss_dssp EEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEEEEEEEEEECCCSCCBTTCCCEE-------
T ss_pred ccceeECCCCcEEEEEEEEEEeccccCCCEEEEEEecCCCcceeeEEEEEecCCeEEEecCCCceEeCCCeEE-------
Confidence 11 10 01 12457777888999999999999998865555545454444211 000111233444
Q ss_pred EEEEeeeeccCcee----e-EEEEeCCeEeeecccceeeEEEEc-cCCCCCcEEEEEEEEcCCCCceeeEEEEEecCCCC
Q psy7040 631 YLQELHSSLMPISL----E-SQYLMNDKRVTIDNVDYFTKITIR-PLQRSDTAQYTVTATNSQGKDQVFIEVVVTDKPSA 704 (716)
Q Consensus 631 y~v~~~~~~~~~~~----~-~~W~~~~~~~~~~~~~~~~~~~i~-~l~~~~~y~y~~~a~n~~G~~~~s~~l~v~~~p~~ 704 (716)
|.|.+.| . +.|++++..+..........|.|. ++...|.|.|+|.|.|..|....++.|.|...+..
T Consensus 252 -------l~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~L~i~~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~ 324 (331)
T 3u83_A 252 -------LTCKADANPPATEYHWTTLNGSLPKGVEAQNRTLFFKGPINYSLAGTYICEATNPIGTRSGQVEVNITEAAAL 324 (331)
T ss_dssp -------EEEEEEEESCCCEEEEEETTBSCCTTEEEETTEEEECSCCCGGGCEEEEEEEEETTEEEEEEEEECCBC----
T ss_pred -------EEEeCcCCCCCCEEEEEECCCcccccceecCcEEEEeCCCccccCeEEEEEEEeccccceEEEEEEEeccchh
Confidence 5555555 4 999999987765433344689999 89999999999999999999999999999887665
Q ss_pred C
Q psy7040 705 P 705 (716)
Q Consensus 705 p 705 (716)
.
T Consensus 325 ~ 325 (331)
T 3u83_A 325 E 325 (331)
T ss_dssp -
T ss_pred h
Confidence 4
No 117
>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A
Probab=99.63 E-value=1.2e-14 Score=133.06 Aligned_cols=178 Identities=20% Similarity=0.209 Sum_probs=126.3
Q ss_pred CCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCCcEEEeccc---CCCeEEe--cCCCCCcEEEEEEEEEec
Q psy7040 58 EGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETGVWIPVGKT---REPEMDV--TGLTPGHEYKFRVKALNK 132 (716)
Q Consensus 58 ~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~---~~~~~~i--~~L~~~~~y~~~v~a~~~ 132 (716)
|.+|+......+++.++|+++.. ++. ...|.|+|+..+...|..|... ....+.+ .+|.+.+.|.|+|+|.|.
T Consensus 7 P~nl~c~~~~~~~~~c~W~p~~~-~~~-~~~Y~l~y~~~~~~~~~~c~~~~~~~~~~c~~~~~~l~~~~~Y~~~V~A~N~ 84 (210)
T 3n06_B 7 PEIFKCRSPNKETFTCWWRPGTD-GGL-PTNYSLTYHREGETLMHECPDYITGGPNSCHFGKQYTSMWRTYIMMVNATNQ 84 (210)
T ss_dssp CEEEEEEBSSSSCEEEEEECCSS-SCC-CSEEEEEEEETTCCCCEECSCSSTTCTTEEEECGGGCCSSSCEEEEEEEEET
T ss_pred CeEeEEEeCCCCeEEEEECCCCC-CCC-CceEEEEEEECCCCccccCCCCCCCCCeEEEeCCCCcccceeEEEEEEEEcC
Confidence 33455556677899999998773 334 4789999998777778887531 1234544 579999999999999999
Q ss_pred CccCCCccccceEEecCCCCcccccccccceecccCCCCCCceEEEEecCCccEEEEeccccCcceEEEEEEEeCCCCce
Q psy7040 133 EGESEPLETFSSIIARDPYSKYTSVSSLDSHKRSNQPCGSGMVRKVQHLDYNTKLGVRMAQRADAGFYTVTAENINGKDS 212 (716)
Q Consensus 133 ~g~~~~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~G~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~ 212 (716)
.|.+.+.... +....
T Consensus 85 ~G~~~s~~~~--~~~~~--------------------------------------------------------------- 99 (210)
T 3n06_B 85 MGSSFSDELY--VDVTY--------------------------------------------------------------- 99 (210)
T ss_dssp TEEEECCCEE--ECGGG---------------------------------------------------------------
T ss_pred CCCeeCCcEE--Echhh---------------------------------------------------------------
Confidence 9876422111 10000
Q ss_pred eEEEEEEecCCCCCCCCeEEeEEe----CCeEEEEEECCCCCC---CCccceEEEEEEeCCCCCeEEccccCcccceEEE
Q psy7040 213 VEVEVIVLDKPSPPGGPLKVSNVH----AEGVTLDWKVPDDDG---GQPIEKYVVDKMDEATGRWTPAGETEGPVTGLEV 285 (716)
Q Consensus 213 ~~~~~~v~~~p~~p~~~~~~~~~~----~~~~~l~W~~p~~~~---~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i 285 (716)
..+|.+|.+ +.+.... .+++.|+|.+|.... |..+..|.|+++..+...|..... .....+.|
T Consensus 100 -------~v~p~pP~~-l~~~~~~~~~~~~~l~l~W~~p~~~~~~~g~~~~~Y~v~y~~~~~~~~~~~~~--~~~~~~~l 169 (210)
T 3n06_B 100 -------IVQPDPPLE-LAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEIHFA--GQQTEFKI 169 (210)
T ss_dssp -------CBCCCCCEE-EEEEEECCSSSCCEEEEEEECCTTCCCTTSSCCEEEEEEEECTTCSSCEEEEE--ETCSEEEE
T ss_pred -------eEecCCCce-EEEEEecCcCCCceEEEEcCCCCCccccCCeEEEEEEEEEecCCCCCCEEEec--cCceEEEE
Confidence 025777776 6766553 478999999876543 334689999999877777865432 34679999
Q ss_pred cCCCCCCeEEEEEEEEcCCCC-CCCCcc
Q psy7040 286 EGLIPNHKYKFRVRAVNKQGK-SEPLTT 312 (716)
Q Consensus 286 ~~L~p~~~y~~~v~a~n~~g~-~~~~~~ 312 (716)
.+|.|++.|.|+|+|.+..|. |+++..
T Consensus 170 ~~L~p~t~Y~v~Vra~~~~g~wS~wS~~ 197 (210)
T 3n06_B 170 LSLHPGQKYLVQVRCKPDHGYWSAWSPA 197 (210)
T ss_dssp CCCCTTCEEEEEEEEEESSSCCCCCCCC
T ss_pred eccCCCCEEEEEEEEecCCCcccCCCCc
Confidence 999999999999999998775 444444
No 118
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.62 E-value=1.2e-14 Score=133.99 Aligned_cols=138 Identities=25% Similarity=0.322 Sum_probs=117.9
Q ss_pred ceEEEEecCCccEEEEeccccCcceEEEEEEEeCCCCceeEEEEEEecCCCCCCCCeEEeEEeCCeEEEEEECCCCCCCC
Q psy7040 174 MVRKVQHLDYNTKLGVRMAQRADAGFYTVTAENINGKDSVEVEVIVLDKPSPPGGPLKVSNVHAEGVTLDWKVPDDDGGQ 253 (716)
Q Consensus 174 ~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~ 253 (716)
.++.+........|.|.++...|.|.|+|.|.|..|.....+.+.+..+|.+|.. +.+ .....++.|.|.+|..+++.
T Consensus 65 ~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~P~~p~~-~~~-~~~~~~~~l~w~~p~~~~~~ 142 (215)
T 3mtr_A 65 SNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQESLEFILVQADTPSSPSI-DQV-EPYSSTAQVQFDEPEATGGV 142 (215)
T ss_dssp CSEEEEEETTEEEEEECCCSGGGCEEEEEEEECSSCEEEEEEEEEECCCCCCCEE-EEE-EEETTEEEEEEECCSCCCSS
T ss_pred ccEEEecCCCeeEEEEecCChhhCeEEEEEEEECCCceEEEEEEEECCCCCCCcc-eEE-EEecceEEEEEecCCccCCC
Confidence 4666666667889999999999999999999999999999999999999999876 455 46788999999988877888
Q ss_pred ccceEEEEEEeCCCCCeEEcccc---CcccceEEEcCCCCCCeEEEEEEEEcCCCCCCCCccc
Q psy7040 254 PIEKYVVDKMDEATGRWTPAGET---EGPVTGLEVEGLIPNHKYKFRVRAVNKQGKSEPLTTT 313 (716)
Q Consensus 254 ~~~~y~v~~~~~~~~~~~~~~~~---~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~~~~~ 313 (716)
++..|.|+++..+...|...... ......+.|.+|.+++.|.|+|.|.|..|.+.++...
T Consensus 143 pi~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~ 205 (215)
T 3mtr_A 143 PILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAAS 205 (215)
T ss_dssp CEEEEEEEEEETTCCCCEEEEEEHHHHHHHTEEEEECCCTTCEEEEEEEEEESSCBCCCCCCE
T ss_pred ceEEEEEEEEECCCCcccccccccccccccccEEECCCCCCCEEEEEEEEEeCCcccCcccce
Confidence 99999999998888788765321 1223889999999999999999999999998887665
No 119
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=99.62 E-value=1e-13 Score=136.43 Aligned_cols=240 Identities=12% Similarity=0.073 Sum_probs=155.0
Q ss_pred EEEecCCeEEEEEEEeccC-CCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEEEE
Q psy7040 436 IKVRAGSNFEFDINVIGEP-IPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKV 514 (716)
Q Consensus 436 ~~~~~g~~~~~~~~v~~~p-~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~ 514 (716)
+.+..|..+.|.|.+.+.+ .+.+.|.+++..+... ....... ...|.|.++...|.|.|+|.+ .|.....+.+
T Consensus 16 v~~~~G~~v~l~C~~~~~~~~~~i~W~~~~~~~~~~-~~~~~~~--~~~L~i~~v~~~d~G~Y~C~~---~g~~~~~~~L 89 (325)
T 1n26_A 16 LTSLPGDSVTLTCPGVEPEDNATVHWVLRKPAAGSH-PSRWAGM--GRRLLLRSVQLHDSGNYSCYR---AGRPAGTVHL 89 (325)
T ss_dssp EEECTTCCEEEECTTSCTTCCSEEEEEEECSSSSCC-CEEEEEE--SSEEEECSCCGGGCEEEEEES---SSSCSCEEEE
T ss_pred EECCCCCcEEEEeCCCCCCCCceEEEEECCccCCcc-ccccccc--cceEEecccchhhCeEeEEEe---CCEEeeeEEE
Confidence 4457999999999988755 6899999987654211 1222222 347999999999999999993 5655555655
Q ss_pred EEE-----------------EEEEEEeCCCCCCCCceeeEEEEEEecCCCceeeeE-EEccceeeeeccccceeEEEEcC
Q psy7040 515 TVL-----------------GCSLKWNPPEDDGGAPIEYYMVEKMETDTGKVLIKW-IRTNDKRVTIDNVDYFTKITIRP 576 (716)
Q Consensus 515 ~v~-----------------~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~w-~~~~~~~~~~~~~~~~~~~~i~~ 576 (716)
.+. .+.++|.++.+. + ....|.|.++...... ...| ...... .......+.|..
T Consensus 90 ~V~~pP~~P~l~c~~~~~~~~~~c~W~~~~~~-~-~~~~y~l~~~~~~~~~-~~~~~~~c~~~-----~~~~~~~c~i~~ 161 (325)
T 1n26_A 90 LVDVPPEEPQLSCFRKSPLSNVVCEWGPRSTP-S-LTTKAVLLVRKFQNSP-AEDFQEPCQYS-----QESQKFSCQLAV 161 (325)
T ss_dssp EECCCCCCCCCEEEBSSTTSCEEEEECCSSCC-C-TTCEEEEEEEEESSSS-CEEEEEEEEEE-----TTTTEEEEEECC
T ss_pred EeccCCCCCceeEEeecCCCcEEEEECCCCCC-C-CCceEEEEEEEccCCC-CCcccccCCCC-----CCCCCEEEEECC
Confidence 554 789999987543 3 3578999887542100 0232 221100 011236788888
Q ss_pred CC-CCCeEEEEEEEEcCCCCCccc-eeeec--cCCCCCCcc--ceeec--cceeEEEEE----------EeeEEEEeeee
Q psy7040 577 LQ-RSDTAQYTVTATNSQGKDQVF-IEVVV--TDKPSAPEG--PIQWL--LTLTDVTWE----------ISNYLQELHSS 638 (716)
Q Consensus 577 L~-~~~~y~~~v~a~n~~G~~~~s-~~~~v--~~~p~~~~~--~~~~~--~~~v~l~w~----------i~~y~v~~~~~ 638 (716)
+. +++.|.|+|.|.|..|.+... ..+.+ ..+|.+|.. +..+. .+++.|+|. +.+|.|+|+..
T Consensus 162 ~~~~~~~Y~f~v~A~N~~G~~~s~~~~~~~~~~v~P~pP~~l~v~~~~~~~~sv~lsW~~p~~~~~~~~~~~Y~V~yr~~ 241 (325)
T 1n26_A 162 PEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAE 241 (325)
T ss_dssp CTTCCCEEEEEEEEEETTEEEECCCEEEETTTCBCCCCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEET
T ss_pred CcccCcEEEEEEEEEcCCCCcccCcEEEeeccccCCCCCcceEEEEecCCCCEEEEEECCCCccCCCcEeEEEEEEEEeC
Confidence 76 789999999999999976421 12221 223444432 34443 258999998 47888888763
Q ss_pred ccCceeeEEEEeCCeEeeecccceeeEEEEccCCCCCcEEEEEEEEcCCCCce---eeEEEEEec
Q psy7040 639 LMPISLESQYLMNDKRVTIDNVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQ---VFIEVVVTD 700 (716)
Q Consensus 639 ~~~~~~~~~W~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~y~~~a~n~~G~~~---~s~~l~v~~ 700 (716)
. .-.|.. +.. ......+.|.+|.++..|.++|+|.|..|.+. ++..+...+
T Consensus 242 ~-----~~~W~~----~~~--~~~~~~~~l~~L~p~t~Y~~rVrA~n~~g~G~~S~wS~~~~~~~ 295 (325)
T 1n26_A 242 R-----SKTFTT----WMV--KDLQHHCVIHDAWSGLRHVVQLRAQEEFGQGEWSEWSPEAMGTP 295 (325)
T ss_dssp T-----CSCCEE----EEC--GGGCSEEEESSCCTTCCEEEEEEEEETTTBSCCCCCCCCEEECC
T ss_pred C-----CCCCEE----Ecc--cCCceEEEEeCCCCCCeEEEEEEEecCCCCCCCcCCCCccceec
Confidence 2 123432 111 12236889999999999999999999988764 344444433
No 120
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.61 E-value=1.5e-14 Score=138.22 Aligned_cols=233 Identities=14% Similarity=0.061 Sum_probs=146.4
Q ss_pred EEEecCCeEEEEEEEec-cCCC--eEEEEeCCeEeccCCcEEEEeCCCeEEEEECCC---CCCCce--eEEEEEEcCCCc
Q psy7040 436 IKVRAGSNFEFDINVIG-EPIP--TKEWLCNDITIISKDRFKIVNDDKSTKLKVFDS---KRGDSG--IYTLAVKNSWGT 507 (716)
Q Consensus 436 ~~~~~g~~~~~~~~v~~-~p~~--~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l---~~~~~~--~y~~~a~n~~g~ 507 (716)
..+.+|+.+.|.|.+.+ .|.+ .+.|++++..+.. .+...+. .+.+... ...|.| .|+|.|.|..|.
T Consensus 13 ~~v~~G~~v~l~C~~~g~~p~p~~~v~W~k~~~~l~~----~~~~~~~--~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~ 86 (265)
T 2oz4_A 13 RVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP----TVTYGND--SFSAKASVSVTAEDEGTQRLTCAVILGNQS 86 (265)
T ss_dssp SEEETTEEEEEEEEEESCSCGGGCEEEEEETTEECCC----EEEECSS--EEEEEEEEEECGGGCEEEEEEEEEEETTEE
T ss_pred ceEecCCCEEEEEEccCCCCCcceEEEEEeCCEECCc----eEeeCCC--eEEEEeecccccccCCcceEEEEEecCCCC
Confidence 36889999999999998 7776 9999999988754 2333332 4444443 566666 599999999998
Q ss_pred eeeEEEEEEE---EEEEEEeCCC-CCCCCceeeEEEEEEecCCCceeeeEEEccceeeeeccccceeEEEEcCCCCCCeE
Q psy7040 508 DKGTAKVTVL---GCSLKWNPPE-DDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDNVDYFTKITIRPLQRSDTA 583 (716)
Q Consensus 508 ~~~s~~~~v~---~v~l~W~~p~-~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y 583 (716)
...+..+.+. ...+.-.... ..+......|.+. +.+.+.| .+.... .......+.+......+.+
T Consensus 87 ~~~~~~l~V~~~p~p~~~~~~~~v~~G~~v~l~C~~~------p~~~i~W--~g~~~~---~~~~~~~l~i~~~~~~~~g 155 (265)
T 2oz4_A 87 QETLQTVTIYSFPAPNVILTKPEVSEGTEVTVKCEAH------PRAKVTL--NGVPAQ---PLGPRAQLLLKATPEDNGR 155 (265)
T ss_dssp EEEEEEEEEECCCCCEEEESCSEEETTCEEEEEEECC------TTSEEEE--SSCSSS---CCSSEECCEEECCGGGTTE
T ss_pred cEEEEEEEEeCCCCceeecCCceecCCCcEEEEEEcc------CCCEEEE--CCEEcc---CCCCcEEEEEccccccCCc
Confidence 8777777775 1122211111 1112212222222 4555899 443321 1122366778888899999
Q ss_pred EEEEEEEcCC-CCCc---cceeeeccCCCCCCccceeeccceeEEEEEEeeEEEEeeeeccCcee----eEEEEeCCeEe
Q psy7040 584 QYTVTATNSQ-GKDQ---VFIEVVVTDKPSAPEGPIQWLLTLTDVTWEISNYLQELHSSLMPISL----ESQYLMNDKRV 655 (716)
Q Consensus 584 ~~~v~a~n~~-G~~~---~s~~~~v~~~p~~~~~~~~~~~~~v~l~w~i~~y~v~~~~~~~~~~~----~~~W~~~~~~~ 655 (716)
.|+|.|.|.. |... ....+.|..+|.... ... ...+.+. .|-.+ .|.|.+.| .+.|+++|..+
T Consensus 156 ~Y~C~a~n~~~g~~~~~s~~~~l~V~~~p~~~~-~~~--p~~~~v~---~g~~~---~l~C~~~g~P~p~i~W~~~~~~~ 226 (265)
T 2oz4_A 156 SFSCSATLEVAGQLIHKNQTRELRVLYGPRLDE-RDC--PGNWTWP---ENSQQ---TPMCQAWGNPLPELKCLKDGTFP 226 (265)
T ss_dssp EEEEEEEEECSSSEEEEEEEEEEEEEEEEECCG-GGS--CSEEEEE---TTCEE---CCCCCCEEESCCEEEEEETTTEE
T ss_pred eEEEEEEcCCCCCcccccccEEEEEEeCCcccc-ccC--CCccEEc---CCCeE---EEEeECccCCCCeEEEEECCccc
Confidence 9999998644 6544 333344555444321 110 0111111 12222 38888888 89999999843
Q ss_pred eecccceeeEEEEccCCCCCcEEEEEEEEcCCCCceeeEEEEEecC
Q psy7040 656 TIDNVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTDK 701 (716)
Q Consensus 656 ~~~~~~~~~~~~i~~l~~~~~y~y~~~a~n~~G~~~~s~~l~v~~~ 701 (716)
... ..+ ..+..+|+|.|+|.|.|..|....++.|.|..+
T Consensus 227 ~~~-----g~~--~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~p 265 (265)
T 2oz4_A 227 LPI-----GES--VTVTRDLEGTYLCRARSTQGEVTREVTVNVLSP 265 (265)
T ss_dssp CCT-----TSC--EECCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred CCC-----CcE--EEeehhhCeEEEEEEECCCCcEEEEEEEEEecC
Confidence 332 112 248889999999999999999999999998763
No 121
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.61 E-value=1.2e-14 Score=141.11 Aligned_cols=243 Identities=14% Similarity=0.173 Sum_probs=150.4
Q ss_pred ccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeE
Q psy7040 432 QLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGT 511 (716)
Q Consensus 432 ~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s 511 (716)
....+.+.+|+.+.|.|.+.+ .+.|++++... ...........|.|.++...|.|.|+|.|.|..|..+..
T Consensus 10 ~~~~~~v~~G~~v~L~C~~~~----~v~W~~~~~~~-----~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~ 80 (289)
T 3ejj_X 10 SGPELVVEPGETVTLRCVSNG----SVEWDGPISPY-----WTLDPESPGSTLTTRNATFKNTGTYRCTELEDPMAGSTT 80 (289)
T ss_dssp CSSEEEECTTCCEEEEEECSS----CCEEECSCSSS-----SEECCCSSCCEEEESSCCGGGCEEEEEECCC-----CEE
T ss_pred CCceEEECCCCCEEEEEEeCC----cEEEccCCCce-----EEEeccCCccEEEEeeeccccCEEEEEEEeccCCcceeE
Confidence 345678999999999999877 49999776432 223334456789999999999999999999998887777
Q ss_pred EEEEEEEEEEEEeC-CC----CCCCCceeeEEEEEEecCCCce-eeeEEEccceeeeec---cccceeEEEEcCCCCCCe
Q psy7040 512 AKVTVLGCSLKWNP-PE----DDGGAPIEYYMVEKMETDTGKV-LIKWIRTNDKRVTID---NVDYFTKITIRPLQRSDT 582 (716)
Q Consensus 512 ~~~~v~~v~l~W~~-p~----~~~~~~i~~y~v~~~~~~~~~~-~~~w~~~~~~~~~~~---~~~~~~~~~i~~L~~~~~ 582 (716)
..+.+......+.. +. ..+......|.+. ..+.+ .+.|++.+....... .......+.|.++...+.
T Consensus 81 ~~l~V~~~~~~~~~~~~~~~v~~g~~v~L~C~~~----~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~ 156 (289)
T 3ejj_X 81 IHLYVKDPAHSWNLLAQEVTVVEGQEAVLPCLIT----DPALKDSVSLMREGGRQVLRKTVYFFSPWRGFIIRKAKVLDS 156 (289)
T ss_dssp EEEEECCSSCSEEESCSEEEEETTSCEEECEEES----CGGGGGSEEEEEGGGEECCTTCCEEEETTTEEEESSCCGGGC
T ss_pred EEEEEeCCCcceecccceEEEecCCceEeEEEcc----CCCcceEEEEEecCCeecCCCccEEECCCCCEEEeecccccC
Confidence 76666510000000 00 1111212233322 22222 288987443221100 111235799999999999
Q ss_pred EEEEEEEE-cCCCCCccceeeeccCC-CCCCccceee-------ccceeEEEEEEeeEEEEeeeeccCcee-----eEEE
Q psy7040 583 AQYTVTAT-NSQGKDQVFIEVVVTDK-PSAPEGPIQW-------LLTLTDVTWEISNYLQELHSSLMPISL-----ESQY 648 (716)
Q Consensus 583 y~~~v~a~-n~~G~~~~s~~~~v~~~-p~~~~~~~~~-------~~~~v~l~w~i~~y~v~~~~~~~~~~~-----~~~W 648 (716)
+.|+|.|. +..|.......+.|... +..|. +... .+..+. |.|.+.+ .+.|
T Consensus 157 G~Y~C~a~~~~~~~~~~~~~l~V~~~~~~~p~-i~~~~~~~~~~~g~~~~--------------l~C~~~~~~p~~~i~W 221 (289)
T 3ejj_X 157 NTYVCKTMVNGRESTSTGIWLKVNRVHPEPPQ-IKLEPSKLVRIRGEAAQ--------------IVCSATNAEVGFNVIL 221 (289)
T ss_dssp EEEEEEEEETTEEEECCCEEEEEESSCCCCCE-EEEESSSEECCSSSCEE--------------EEEEEEESSSCCEEEE
T ss_pred EEEEEEEEeCCCccccccEEEEEEECCCCCCe-EEecCCceEEEeCCcEE--------------EEEEeCCCCCceEEEE
Confidence 99999999 44444334444445422 22333 2221 133333 5555554 8999
Q ss_pred EeCCeEeeec--------ccceeeEEEEccCCCCCcEEEEEEEEcCCCCceeeEEEEEecCC
Q psy7040 649 LMNDKRVTID--------NVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTDKP 702 (716)
Q Consensus 649 ~~~~~~~~~~--------~~~~~~~~~i~~l~~~~~y~y~~~a~n~~G~~~~s~~l~v~~~p 702 (716)
++++..+... .......|.|.++...|.|.|+|.|.|..|....++.|.+...+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~s~~L~~~~~~ 283 (289)
T 3ejj_X 222 KRGDTKLEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRTATMNFQVVESH 283 (289)
T ss_dssp EETTEECCCCEEEEECSSSEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEEECC---
T ss_pred EECCEEeeccCCcccccceEEeeEEEEEEeecccCCEEEEEEEEcCCCCccccEEEEEEecc
Confidence 9999887553 11224789999999999999999999999999999988876654
No 122
>4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}
Probab=99.60 E-value=2.7e-15 Score=139.04 Aligned_cols=156 Identities=19% Similarity=0.173 Sum_probs=96.7
Q ss_pred CCCccceEEEEEEcCCCCcEEEecccCCCeEEecCCCCCcEEEEEEEEEecCccCCCccccceEEecCCCCccccccccc
Q psy7040 82 GGEPLEGYLVEKYDPETGVWIPVGKTREPEMDVTGLTPGHEYKFRVKALNKEGESEPLETFSSIIARDPYSKYTSVSSLD 161 (716)
Q Consensus 82 ~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~~~~g~~~~s~~~~~~~~~~p~~~~~~~~~~~ 161 (716)
++..|.+|.|++.......+........+++++.+|.|++.|.|||+|.|..|.+.++......+..+
T Consensus 18 ~~~~Vt~Y~~~~~~~~~~~~~~~~~~~~t~~~~~~L~p~t~Y~frV~A~n~~G~g~~s~~~~~~t~~~------------ 85 (232)
T 4go6_B 18 TNVMVTHYFLPPDDAVPSDDDLGTVPDYNQLKKQELQPGTAYKFRVAGINACGRGPFSEISAFKTCLP------------ 85 (232)
T ss_dssp SEEEECEEECCCC------------------CEEECCTTCEEEEEEEEEETTEEEEECCCEEEECCCT------------
T ss_pred CCEEEEEEEEEeeCCCCCcEEEEECCCccEEEeCCCCCCCEEEEEEEEEeCCCccccccceeeeecCC------------
Confidence 34558899988765444433333344457899999999999999999999999888776544333211
Q ss_pred ceecccCCCCCCceEEEEecCCccEEEEeccccCcceEEEEEEEeCCCCceeEEEEEEecCCCCCCCCeEEeEEeCCeEE
Q psy7040 162 SHKRSNQPCGSGMVRKVQHLDYNTKLGVRMAQRADAGFYTVTAENINGKDSVEVEVIVLDKPSPPGGPLKVSNVHAEGVT 241 (716)
Q Consensus 162 ~~~~~~~p~G~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~~p~~~~~~~~~~~~~~~ 241 (716)
.+|.+|. +.......+++.
T Consensus 86 -----------------------------------------------------------~~~~~~~--~~~~~~~~~sv~ 104 (232)
T 4go6_B 86 -----------------------------------------------------------GFPGAPC--AIKISKSPDGAH 104 (232)
T ss_dssp -----------------------------------------------------------TSCCCCE--EEEEEEETTEEE
T ss_pred -----------------------------------------------------------CCCCCCe--eeEEecCCCEEE
Confidence 1233333 344566789999
Q ss_pred EEEECCCCCCCCccceEEEEEEeCCCCCe-------------EEccccCcccc-------eEEEcCCCCCCeEEEEEEEE
Q psy7040 242 LDWKVPDDDGGQPIEKYVVDKMDEATGRW-------------TPAGETEGPVT-------GLEVEGLIPNHKYKFRVRAV 301 (716)
Q Consensus 242 l~W~~p~~~~~~~~~~y~v~~~~~~~~~~-------------~~~~~~~~~~~-------~~~i~~L~p~~~y~~~v~a~ 301 (716)
|+|.+|..++| +|.+|.|+++......+ ..+........ ...+.+|.+++.|.|+|+|.
T Consensus 105 l~W~~P~~~~G-~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~t~Y~frV~A~ 183 (232)
T 4go6_B 105 LTWEPPSVTSG-KIIEYSVYLAIQSSQAGGELKSSTPAQLAFMRVYCGPSPSCLVQSSSLSNAHIDYTTKPAIIFRIAAR 183 (232)
T ss_dssp EEEECCSCCSS-CCCEEEEEEEEC-------------CCEEEEEEEEESSSEEEEEHHHHTTBCBEESSSEEEEEEEEEE
T ss_pred EEEeCCCCCCC-ceeeEEEEEEECCCCCcceeeeccCCceeeEEEEeccCceEEEEccccEEeeecCccCCceEEEEEEE
Confidence 99999988777 79999999876544322 22211111112 22345789999999999999
Q ss_pred cCCCCCCCCc
Q psy7040 302 NKQGKSEPLT 311 (716)
Q Consensus 302 n~~g~~~~~~ 311 (716)
|..|.+..+.
T Consensus 184 N~~G~Gp~S~ 193 (232)
T 4go6_B 184 NEKGYGPATQ 193 (232)
T ss_dssp CSSCBCCCEE
T ss_pred CCCcCCCCcc
Confidence 9999987665
No 123
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.60 E-value=1.5e-14 Score=149.87 Aligned_cols=302 Identities=11% Similarity=0.064 Sum_probs=173.6
Q ss_pred CCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEec-cCCC-e
Q psy7040 380 DTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIG-EPIP-T 457 (716)
Q Consensus 380 ~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~-~p~~-~ 457 (716)
....+.|.++...+.+.|+|.|.|..|... +. .....+.....+|.+........ ...|..+.|.|.+.+ .|.+ .
T Consensus 73 ~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~-~~-~~~l~V~~~~~~P~v~~~~~~~~-~~~g~~~~l~C~~~g~~p~~~~ 149 (438)
T 1qgc_4 73 TDFTLTIDPVEADDVATYYCQQSNEVPLTF-GA-GTKLDLKRADAAPTVSIFPPSSE-QLTSGGASVVCFLNNFYPKDIN 149 (438)
T ss_dssp TEEEEEESSCCGGGCEEEEEEECSSTTCCB-CC-CEEEEECCCCBCCEEEEECCCHH-HHHTTEEEEEEEEEEEBSSCEE
T ss_pred CcEEEEeCCCcCcCCeeEEEEEecCCCccc-cC-ceeEEecCCCCCCEEEecCCChh-hccCCceEEEEEEccccCCCcE
Confidence 345799999999999999999999876321 11 11222222233555432111111 124778999999977 6766 8
Q ss_pred EEEEeCCeEeccCCcEE--EEeCCC-----eEEEEECCCCCCCceeEEEEEEcCCCceeeEEEEEEE--EEEEEEeCC--
Q psy7040 458 KEWLCNDITIISKDRFK--IVNDDK-----STKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVL--GCSLKWNPP-- 526 (716)
Q Consensus 458 ~~W~~~~~~~~~~~~~~--~~~~~~-----~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v~--~v~l~W~~p-- 526 (716)
+.|++++..+....... +..... ...|.|.++..+|.|.|+|.|.|..|.......+... .+.+.-...
T Consensus 150 v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (438)
T 1qgc_4 150 VKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNECEVMLVESGGGL 229 (438)
T ss_dssp EEEEETTEEECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSCEEEEEETTC-CCEEEEECCEE
T ss_pred EEEEECCEEcCCCceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCCceecccccccceeEEecCCceE
Confidence 99999998876541111 111111 3478999999999999999999998875433333211 111110010
Q ss_pred CCCCCCceeeEEEEEEecCCCceeeeEEEc--cceeeee------------------------ccccceeEEEEcCCCCC
Q psy7040 527 EDDGGAPIEYYMVEKMETDTGKVLIKWIRT--NDKRVTI------------------------DNVDYFTKITIRPLQRS 580 (716)
Q Consensus 527 ~~~~~~~i~~y~v~~~~~~~~~~~~~w~~~--~~~~~~~------------------------~~~~~~~~~~i~~L~~~ 580 (716)
...+......|.+...+. +.+.+.|++. +...... ........+.|.+++..
T Consensus 230 v~~G~~v~L~C~~~g~p~--~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~ 307 (438)
T 1qgc_4 230 VKPGGSLKLSCTASGFIF--NRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSA 307 (438)
T ss_dssp ECTTCCEEEEEEEESSCG--GGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred EecCCcEEEEEEEccccc--CCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEEECCCChh
Confidence 122233334444433221 1234889875 2211100 00112348999999999
Q ss_pred CeEEEEEEEEcCCCC-----CccceeeeccC-CCCCCcccee-------eccceeEEEEEEeeEEEEeeeeccCceeeEE
Q psy7040 581 DTAQYTVTATNSQGK-----DQVFIEVVVTD-KPSAPEGPIQ-------WLLTLTDVTWEISNYLQELHSSLMPISLESQ 647 (716)
Q Consensus 581 ~~y~~~v~a~n~~G~-----~~~s~~~~v~~-~p~~~~~~~~-------~~~~~v~l~w~i~~y~v~~~~~~~~~~~~~~ 647 (716)
+.+.|.|.|.|..|. -.....+.|.. ++..|. +.. ..+..+.|.|.+.|+. +..-.+.
T Consensus 308 D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~~~~~P~-v~~~~~~~~~~~g~~v~L~C~~~g~~--------P~~~~v~ 378 (438)
T 1qgc_4 308 DTAMYYCVRREDGGDEGFAYWGQGTVVTVSAAKTTPPS-VYPLAPGSAAAAASMVTLGCLVKGYF--------PEPVTVT 378 (438)
T ss_dssp GCCEEEEEECCSSSCCCCCSBCCCEEEEECSSCCBCCE-EEEECCCGGGCCSSEEEEEEEEESCB--------SSCCEEE
T ss_pred hCEEEEEEEEccCCCccceeeCCCEEEEEecCCCCCCe-EEEcCcccccccCCcEEEEEEecccc--------CCCcEEE
Confidence 999999999995441 11122333432 223333 221 2345566555433320 0000689
Q ss_pred EEeCCeEeeec------ccc---eeeEEEEccCCCCCcEEEEEEEEcCCCCceeeEEE
Q psy7040 648 YLMNDKRVTID------NVD---YFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEV 696 (716)
Q Consensus 648 W~~~~~~~~~~------~~~---~~~~~~i~~l~~~~~y~y~~~a~n~~G~~~~s~~l 696 (716)
|+++|..+... ..+ ....|.|.++..+| |.|+|.|.|..|.......+
T Consensus 379 W~~~g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~g~~~~~~~i 435 (438)
T 1qgc_4 379 WNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKI 435 (438)
T ss_dssp EGGGTCCSSEEECCCEEETTEEEEEEEEEEEEEHHHH-SCCEEEEEEGGGTEEEEEEC
T ss_pred EecCCCCCceeecCccccCCcEEEEEEEEEehhhcCC-ceEEEEEEeCCCCcceeeec
Confidence 99999876432 011 11368999988888 99999999999987655544
No 124
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.60 E-value=8.6e-16 Score=151.40 Aligned_cols=247 Identities=15% Similarity=0.105 Sum_probs=158.9
Q ss_pred cEEEecCCeEEEEEEEeccC-CCeEEEEeCCeEec----cCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCcee
Q psy7040 435 DIKVRAGSNFEFDINVIGEP-IPTKEWLCNDITII----SKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDK 509 (716)
Q Consensus 435 ~~~~~~g~~~~~~~~v~~~p-~~~~~W~~~~~~~~----~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~ 509 (716)
.+.+.+|+.+.|.|.+.+.+ .+.+.|++++.... ...++.. . ...|.|.++...|.|.|+|.|.|..|...
T Consensus 14 ~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~--~--~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~ 89 (315)
T 1itb_B 14 ILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQ--H--KEKLWFVPAKVEDSGHYYCVVRNSSYCLR 89 (315)
T ss_dssp CCEEETTSCCCCBCCCCSCCCSSCCCEECTTSCSCSCCCTTSSSEE--C--SSBEECTTCCGGGCSCCEECCCSSSCCCC
T ss_pred EEEEcCCCcEEEEeeccCcCCCceEEEEeCCCcCccccccCCcEec--c--CCeEEECCCChhhCEEEEEEEeCCceEEE
Confidence 46789999999999999888 78999999986432 1222222 2 23799999999999999999999988766
Q ss_pred eEEEEEEEEEEEEEeCCCCC------------CCCceeeEEEEEEe------cCCCceeeeEEEccceeeeec--cccce
Q psy7040 510 GTAKVTVLGCSLKWNPPEDD------------GGAPIEYYMVEKME------TDTGKVLIKWIRTNDKRVTID--NVDYF 569 (716)
Q Consensus 510 ~s~~~~v~~v~l~W~~p~~~------------~~~~i~~y~v~~~~------~~~~~~~~~w~~~~~~~~~~~--~~~~~ 569 (716)
....+.+. -.+|... .|. .-.+...- .+.+.+.+.|++.+....... .....
T Consensus 90 ~~~~v~v~-----~~~p~~~~~~~~~~~~~~~~g~---~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~~~~~~~~ 161 (315)
T 1itb_B 90 IKISAKFV-----ENEPNLCYNAQAIFKQKLPVAG---DGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVK 161 (315)
T ss_dssp EECCCEEE-----CCCTTSSSCGGGEEEEEEETTS---CEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCSSSEEEET
T ss_pred EEEEEEEe-----CCCCCcccccccccceEEecCC---CeEEEEecccccccCCCCCCEEEEEECCEECCCccceEeecC
Confidence 55444433 0111100 011 11233322 333455699999876552111 11223
Q ss_pred eEEEEcCCCCCCeEEEEEEEE-cCCCCCcc-ceeee--c--cCCCCCCccceeeccceeEEEEEEeeEEEEeeeeccCce
Q psy7040 570 TKITIRPLQRSDTAQYTVTAT-NSQGKDQV-FIEVV--V--TDKPSAPEGPIQWLLTLTDVTWEISNYLQELHSSLMPIS 643 (716)
Q Consensus 570 ~~~~i~~L~~~~~y~~~v~a~-n~~G~~~~-s~~~~--v--~~~p~~~~~~~~~~~~~v~l~w~i~~y~v~~~~~~~~~~ 643 (716)
..+.|.++...+.+.|+|.|. |..|.... +..+. + +..+..|. +.......+.+. .|-.+ .|.|.+.
T Consensus 162 ~~L~i~~v~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~~~~P~-~~~~~~~~~~~~---~g~~v---~l~C~~~ 234 (315)
T 1itb_B 162 DRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPV-IVSPANETMEVD---LGSQI---QLICNVT 234 (315)
T ss_dssp TEEEESSCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCCCCCCCE-ECSCCSEEEECC---SSSCE---EEEEEEE
T ss_pred ceEEEEeceehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCCCCCCCE-EecCCCCcEEEe---CCCcE---EEEEEEe
Confidence 689999999999999999999 78876522 12221 1 22233333 221111111100 11111 2667666
Q ss_pred e----eEEEEeCCeEeeeccc------------------ceeeEEEEccCCCCC-cEEEEEEEEcCCCCceeeEEEEEec
Q psy7040 644 L----ESQYLMNDKRVTIDNV------------------DYFTKITIRPLQRSD-TAQYTVTATNSQGKDQVFIEVVVTD 700 (716)
Q Consensus 644 ~----~~~W~~~~~~~~~~~~------------------~~~~~~~i~~l~~~~-~y~y~~~a~n~~G~~~~s~~l~v~~ 700 (716)
| .+.|+++|..+..... .....|.|.++...| +|.|+|.|.|..|....++.|.|..
T Consensus 235 g~P~p~i~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~~ 314 (315)
T 1itb_B 235 GQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPV 314 (315)
T ss_dssp ECTTSEEEEEETTEECCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGGTSCEEEEEECTTCCEEEEEEEECCC
T ss_pred cCCCCeeEEEECCEECCcccccccccceeeeccCCCceeEEEEEEEEeecCHHHcCCceEEEEecCCCceeEEEEEEecC
Confidence 6 7999999998875411 123489999999999 9999999999999999988888743
No 125
>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens}
Probab=99.57 E-value=2.3e-12 Score=130.20 Aligned_cols=421 Identities=14% Similarity=0.104 Sum_probs=240.4
Q ss_pred CeEEEEEECCCCCCCCccceEEEEEEeCCCCCeEEccccCcccceEEEcCCCCCCeEEEEEEEEcCCCCCCCCcccceEE
Q psy7040 238 EGVTLDWKVPDDDGGQPIEKYVVDKMDEATGRWTPAGETEGPVTGLEVEGLIPNHKYKFRVRAVNKQGKSEPLTTTASIE 317 (716)
Q Consensus 238 ~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~~~~~~~~~ 317 (716)
..+..+|+++...+ .-+.|.+.+.. .. ..+... ..+.+.|..|.+++ +.+.|......|.. .....+.
T Consensus 10 ~~~~c~w~~~~~~~--~~~~~~~~~~~-~~---~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~ 77 (483)
T 3e0g_A 10 QVWQCSWKAPSGTG--RGTDYEVCIEQ-RS---RSCYQL--EKTSIKIPALSHGD-YEITINSLHDFGSS---TSKFTLN 77 (483)
T ss_dssp TEEEEBCCCCSSSC--SSCCEEEEECS-SS---CEEEEE--SSSBCCEECCSSSC-CCEEEECSSCC-------CCCEEC
T ss_pred eEEEEeccCCCCCC--CCceEEEEEeC-Cc---ccchhh--hccceEeecCCccc-eEEEEcccCCCCCC---ceeEEEE
Confidence 35677899765422 24578777543 22 223322 35788999999998 55555554433322 2222233
Q ss_pred ecCCCCCCCCCCCcEEEeeeC-CeEEEEecCCCCCC-CccceEEEEEEeecCCCc--eEEEeee--cCCCCeE----Eec
Q psy7040 318 AKNPFNQPGKPGTPEIKDFDT-DFVELAWTPPEQNG-GSPIVGYIIEKKEKYSPI--WEKCAQT--EGDTPKG----KVL 387 (716)
Q Consensus 318 ~~~~~~~p~~p~~~~~~~~~~-~~i~l~W~~p~~~~-~~~i~~y~v~~~~~~~~~--~~~~~~~--~~~~~~~----~i~ 387 (716)
.+.-...|.+|..+.+..... ..+.|+|......- ...-..|.|+........ |...... ......+ +-.
T Consensus 78 ~~~~~~~p~~p~~l~~~~~~~~~~l~~~w~~~~~~~~~~~~~~~~i~i~r~~~~~~v~~~~~~~~~~~~~~~~~w~w~s~ 157 (483)
T 3e0g_A 78 EQNVSLIPDTPEILQLSADFSTSTLYLKWNDRGSVFPHRSNVIWEIKVLRKESMELVKLVTHQTTLNGKDTLHHWSWASD 157 (483)
T ss_dssp CSCCEECCCCCCBCCCEEETTTTEEEEEEEECGGGCCSCCEEEEEEEEESSSSCEEEEEEEEEECGGGCCEEEEEEEECS
T ss_pred cccceeccCCCceEEEEecCCCcEEEEEEeCCCCCCCcccceEEEEEEEEcCCccEEEEEEEEEEecCCCceEEEEecCC
Confidence 333336688899888887766 88999998732211 112346788776654222 2222221 1111111 111
Q ss_pred CCCCCCeEEEEEEEE-eC---CCCCCCCCCCCceEeecC-CCCCcccccccccEEEecCCeEEEEEEEeccCCCeEEEEe
Q psy7040 388 DLIEGNQYEFRVLAV-NK---GGPGEPSDPTAPHIARAK-KVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLC 462 (716)
Q Consensus 388 ~l~~~~~Y~~~v~a~-n~---~g~~~~s~~~~~~~~~~~-~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~ 462 (716)
--.+++.+.++||+. ++ .|.+.+|+.+........ ...+.+ .+.+..+..|.++++.|.+.-+ ......
T Consensus 158 ~plec~~h~v~iR~~~~~~~~~~~~~ws~Ws~~~~~~~~~~~~~~i---fP~~~vv~~GS~vt~~Ci~~~~---~~~~~l 231 (483)
T 3e0g_A 158 MPLECAIHFVEIRCYIDNLHFSGLEEWSDWSPVKQISWIPDSQTKV---FPQDKVILVGSDITFCCVSQEK---VLSALI 231 (483)
T ss_dssp SCTTSSCEEEEEEEEEECTTCCSEECCCCCCCCEEECCCCCSSCCE---ESCSEEEETTCCEEEEECCSSC---EEEEES
T ss_pred CCCCCCccEEEEEEEecccccCCCCCCcCCCChhhccccCCCCcEE---eccCCEEeCCCCEEEEEEeCcc---ccceec
Confidence 224578999999999 33 566567777755554221 112233 2556779999999999987621 122222
Q ss_pred CCeEeccCCcEEEEeCCCeEEEEECCCCCC--CceeEEEEEEcCCCceeeEEEEEEE-----------------EEEEEE
Q psy7040 463 NDITIISKDRFKIVNDDKSTKLKVFDSKRG--DSGIYTLAVKNSWGTDKGTAKVTVL-----------------GCSLKW 523 (716)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~--~~~~y~~~a~n~~g~~~~s~~~~v~-----------------~v~l~W 523 (716)
+. ..............++|.++... ..-.|.|.... . .....+.+. .+.++|
T Consensus 232 ~~-----~~~~~~~l~~~~~~i~v~nl~~~~~sg~n~~C~~~~--~--~~g~~l~vg~PP~~P~nlsC~s~~~~sltCsW 302 (483)
T 3e0g_A 232 GH-----TNCPLIHLDGENVAIKIRNISVSASSGTNVVFTTED--N--IFGTVIFAGYPPDTPQQLNCETHDLKEIICSW 302 (483)
T ss_dssp SS-----CCBCCEECSSSCEEEEECSCCCCCSSCEEEEEEESS--C--EEEEEEEEECCCCCCEEEEEEBSSTTEEEEEE
T ss_pred Cc-----ccceeEEecCCEEEEEEeCCCCccCccceEEEecCC--c--ccceEEECcCCCCCCCccEEEecCCCEEEEEE
Confidence 21 11122334556778888888663 23457776522 1 122223222 899999
Q ss_pred eCCCCCC--CCceeeEEEEEEecCCCceeeeEEEccceeeeeccccceeEEEEcCCCCCCeEEEEEEEEcCCCCCcccee
Q psy7040 524 NPPEDDG--GAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDNVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIE 601 (716)
Q Consensus 524 ~~p~~~~--~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~~ 601 (716)
+++.+.+ |...+.|.|.++..+. . ..+...... ......+.|.+|.+.+.|.|+|.|.|..|.+.....
T Consensus 303 ~pg~dt~l~G~~~t~YtL~y~~~g~--~-~~C~~~~~~------~~~~~~C~~~~l~~~t~Y~f~V~A~N~lG~~~S~~~ 373 (483)
T 3e0g_A 303 NPGRVTALVGPRATSYTLVESFSGK--Y-VRLKRAEAP------TNESYQLLFQMLPNQEIYNFTLNAHNPLGRSQSTIL 373 (483)
T ss_dssp ECCSCCSCCGGGCCEEEEEETTTCC--E-EEECCCSSC------SCSCEEEEEECCTTCCCEEEEEEEECSSCEEEEEEE
T ss_pred CCCCcCCcCCCCCeeEEEEEEECCC--C-ccccCCccc------CCCEEEEEEccCCCCcEEEEEEEEEeCCCCcccceE
Confidence 9987553 3347899999875432 0 111110000 012367889999999999999999999997764322
Q ss_pred eec--cCCCCCCcc--ceeeccceeEEEEE--------EeeEEEEeeeeccCceeeEEEEeCCeEeeec-ccceeeEEEE
Q psy7040 602 VVV--TDKPSAPEG--PIQWLLTLTDVTWE--------ISNYLQELHSSLMPISLESQYLMNDKRVTID-NVDYFTKITI 668 (716)
Q Consensus 602 ~~v--~~~p~~~~~--~~~~~~~~v~l~w~--------i~~y~v~~~~~~~~~~~~~~W~~~~~~~~~~-~~~~~~~~~i 668 (716)
+.+ ..+|.+|.. +.....+.+.|+|. +..|.|+|+...- .-.|.. +... .......+.|
T Consensus 374 ~~~~~~VkP~PP~nl~v~~~~stsl~LsW~~P~~~~~~~L~YeVrYr~~~~----~~~~~~----vsv~~~~~~~~s~~l 445 (483)
T 3e0g_A 374 VNITEKVYPHTPTSFKVKDINSTAVKLSWHLPGNFAKINFLCEIEIKKSNS----VQEQRN----VTIQGVENSSYLVAL 445 (483)
T ss_dssp ECGGGGBCCCCCEEEEECCSSSSSCCEEEECCSCCTTSBCCCEEEEECSSS----CCCEEE----CCCBCCSSSBCCCCC
T ss_pred EEeccccCCCCCeeeEEEEecCCeEEEEECCCCCCCCceEEEEEEEEECCC----CCceEE----EEEeccCCceeEEEE
Confidence 222 233444432 44456789999998 4678887765210 001211 1000 0112236789
Q ss_pred ccCCCCCcEEEEEEEEcCCCC---ceeeEEEEEecCCC
Q psy7040 669 RPLQRSDTAQYTVTATNSQGK---DQVFIEVVVTDKPS 703 (716)
Q Consensus 669 ~~l~~~~~y~y~~~a~n~~G~---~~~s~~l~v~~~p~ 703 (716)
.+|.+++.|.++|+|. ..|. +.+|..+.+.++.+
T Consensus 446 ~~L~PgT~Y~vrVRA~-~~g~g~WSeWS~~~~f~T~E~ 482 (483)
T 3e0g_A 446 DKLNPYTLYTFRIRCS-TETFWKWSKWSNKKQHLTTEA 482 (483)
T ss_dssp CSCCSSSSCEEEEECC-CSSCCCCCCCCCCCCCCCCCC
T ss_pred eccCCCcEEEEEEEEe-eCCCCCcCCCCCceeeECCCC
Confidence 9999999999999999 6676 56666666666543
No 126
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.57 E-value=2e-14 Score=141.44 Aligned_cols=240 Identities=11% Similarity=-0.007 Sum_probs=140.6
Q ss_pred EEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCC-----ceee
Q psy7040 436 IKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWG-----TDKG 510 (716)
Q Consensus 436 ~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g-----~~~~ 510 (716)
..+..|+.+.|.|.+.+. .+.+.|++++..+.... ........|.|.++...|.|.|+|.|.|..+ ..+.
T Consensus 33 ~~v~~G~~v~L~C~~~~~-~~~~~W~k~g~~~~~~~----~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s~ 107 (316)
T 3vh8_G 33 AVVPRGGHVTLRCHYRHR-FNNFMLYKEDRIHIPIF----HGRIFQESFNMSPVTTAHAGNYTCRGSHPHSPTGWSAPSN 107 (316)
T ss_dssp SEEETTSCEEEEEEBTTB-CCSEEEEESSCSSSCHH----HHCCBSSCEEECSCCGGGCEEEEEEEBCSSSSSSBCCCCC
T ss_pred CccCCCCCEEEEEEccCC-CceEEEEeCCCccceee----cCCcceEEEEECCCCcccCeEEEEEEEcCCCCcceecCCC
Confidence 357899999999999887 68899999987653210 1112345799999999999999999987432 2233
Q ss_pred EEEEEEE----EEEEEEeCC--CCCCCCceeeEEEEEEecCCCceeeeEEEccceeeeec------cccceeEEEEcCCC
Q psy7040 511 TAKVTVL----GCSLKWNPP--EDDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTID------NVDYFTKITIRPLQ 578 (716)
Q Consensus 511 s~~~~v~----~v~l~W~~p--~~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~------~~~~~~~~~i~~L~ 578 (716)
...+.+. ...+.-.+. ...+......|.. . .+.+...|++.+....... .......+.|.++.
T Consensus 108 ~~~l~V~~~~~~p~~~~~~~~~v~~G~~v~L~C~~----~-~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~ 182 (316)
T 3vh8_G 108 PVVIMVTGNHRKPSLLAHPGPLVKSGERVILQCWS----D-IMFEHFFLHKEGISKDPSRLVGQIHDGVSKANFSIGPMM 182 (316)
T ss_dssp CEEEEEECSSCCCEEEEESCSEEETTCCEEEEEEE----S-SCCSEEEEEETTCCSCCEEEECEEETTEEEEEEEECSCC
T ss_pred cEEEEEecCCCCCeEEecCCCccCCCCeEEEEEcC----C-CCCcEEEEEECCCccccceeeeeecCCCceEEEEECCCC
Confidence 4455553 111221111 1122222233332 1 2234588888766442111 11234789999999
Q ss_pred CCCeEEEEEEEEcCCCCC---cccee--eeccCCCCCCcccee------eccceeEEEEEEeeEEEEeeeeccCcee---
Q psy7040 579 RSDTAQYTVTATNSQGKD---QVFIE--VVVTDKPSAPEGPIQ------WLLTLTDVTWEISNYLQELHSSLMPISL--- 644 (716)
Q Consensus 579 ~~~~y~~~v~a~n~~G~~---~~s~~--~~v~~~p~~~~~~~~------~~~~~v~l~w~i~~y~v~~~~~~~~~~~--- 644 (716)
..+.+.|+|.|.|..|.. ..+.. +.|...+..|. +.. ..+..+. |.|.+..
T Consensus 183 ~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~~~~p~-i~~~~~~~v~~G~~v~--------------L~C~~~~~~~ 247 (316)
T 3vh8_G 183 LALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPS-LSAQPGPKVQAGESVT--------------LSCSSRSSYD 247 (316)
T ss_dssp GGGCEEEEEEEECTTCTTBCCCCCCCEEEEEECSSCCCE-EEEESCSCCCTTSCCE--------------EEEEESSCCS
T ss_pred hhhCceEEEEEecCCCCccccCCCCCEEEEecCCCCCCe-EEeCCCCeecCCCcEE--------------EEEECCCCCc
Confidence 999999999999998742 22332 33444333333 221 1234455 4444433
Q ss_pred eEEEEeCCeEeeec-------ccceeeEEEEccCCCCCcEEEEEEEEcCCCC-----ceeeEEEEEecCC
Q psy7040 645 ESQYLMNDKRVTID-------NVDYFTKITIRPLQRSDTAQYTVTATNSQGK-----DQVFIEVVVTDKP 702 (716)
Q Consensus 645 ~~~W~~~~~~~~~~-------~~~~~~~~~i~~l~~~~~y~y~~~a~n~~G~-----~~~s~~l~v~~~p 702 (716)
.+.|+++|..+... .......|.|.++. |+|.|+|.|.|..+. .+....|.|..+|
T Consensus 248 ~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g~p 315 (316)
T 3vh8_G 248 MYHLSREGGAHERRLPAVRKVNRTFQADFPLGPAT--HGGTYRCFGSFRHSPYEWSDPSDPLLVSVTGNP 315 (316)
T ss_dssp EEEEEETTSSCCEEEECEECTTSCEEEEEECC-------CEEEEEEEBTTBTTEECCCCCCEEC------
T ss_pred EEEEEECCCcCCCceeceeccCCceeEEEEcCCcC--CCEEEEEEeecCCCchhccCCCCcEEEEEeCCC
Confidence 89999999766532 12233789999999 999999999998774 2444556665544
No 127
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.56 E-value=2.2e-13 Score=134.75 Aligned_cols=241 Identities=10% Similarity=0.113 Sum_probs=139.5
Q ss_pred cccEEEecCCeEEEEEEEecc-CCCeEEEEeCCeEec---------cCCcEEEEeC-----CCeEEEEECCCCCCCceeE
Q psy7040 433 LSDIKVRAGSNFEFDINVIGE-PIPTKEWLCNDITII---------SKDRFKIVND-----DKSTKLKVFDSKRGDSGIY 497 (716)
Q Consensus 433 ~~~~~~~~g~~~~~~~~v~~~-p~~~~~W~~~~~~~~---------~~~~~~~~~~-----~~~~~l~i~~l~~~~~~~y 497 (716)
+..+.+..|+.+.|.|.+.+. |.+.+.|++++.... ...++....+ .....|.|.++...|.|.|
T Consensus 10 p~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 89 (327)
T 2wng_A 10 DKSVSVAAGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPADAGTY 89 (327)
T ss_dssp CSEEEEETTSCEEECCEESCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCCGGGCEEE
T ss_pred CCceEEecCCcEEEEEEccCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCccccCeEE
Confidence 346789999999999999987 889999999874321 0113332211 3456799999999999999
Q ss_pred EEEEEcCCCcee-----eEEEEEEE----EEEEEEeCCC---CCCCCceeeEEEEEEecCCCceeeeEEEccceeeeecc
Q psy7040 498 TLAVKNSWGTDK-----GTAKVTVL----GCSLKWNPPE---DDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDN 565 (716)
Q Consensus 498 ~~~a~n~~g~~~-----~s~~~~v~----~v~l~W~~p~---~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~ 565 (716)
+|.|.|..+... ....+.+. ...+. .|. ..+......|.+...+.. ...+.|++.+........
T Consensus 90 ~C~a~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~--~~~~~~~~g~~~~l~C~~~g~p~~--~~~v~W~k~g~~l~~~~~ 165 (327)
T 2wng_A 90 YCVKFRKGSPDTEFKSGAGTELSVRAKPSAPVVS--GPAARATPQHTVSFTCESHGFSPR--DITLKWFKNGNELSDFQT 165 (327)
T ss_dssp EEEEEESSTTCEEEEECCCEEEEEEBCCCCCEEE--CCSSCBCTTCEEEEEEEEEEEBSS--CCEEEEEETTEECCCEEE
T ss_pred EEEeecCCCcceeEeecCcEEEEEEecCCCceee--ccccccCCCCEEEEEEEEeCccCC--CcEEEEEECCEEcccccc
Confidence 999999876421 22344444 11121 221 222333344555433322 114999998765432210
Q ss_pred ------cc----ceeEEEEcCCCCCCeEEEEEEEEcCCCCCc-cceeee----ccCCCCCCccceee-ccceeEEEEEEe
Q psy7040 566 ------VD----YFTKITIRPLQRSDTAQYTVTATNSQGKDQ-VFIEVV----VTDKPSAPEGPIQW-LLTLTDVTWEIS 629 (716)
Q Consensus 566 ------~~----~~~~~~i~~L~~~~~y~~~v~a~n~~G~~~-~s~~~~----v~~~p~~~~~~~~~-~~~~v~l~w~i~ 629 (716)
.. ....+.|......+.+.|+|.|.|..|.+. ...... +..+|........+ .+..+.|
T Consensus 166 ~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~G~~v~l----- 240 (327)
T 2wng_A 166 NVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVTQQPVRAENQVNV----- 240 (327)
T ss_dssp EEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEEGGGTBCBCCEEEEEEECCSSTTCCEE-----
T ss_pred ccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccCCCcccceEEeccccCCCCEEEEecCCcCCCCcEEE-----
Confidence 00 012355555556667999999999988642 222222 23443211100001 2444554
Q ss_pred eEEEEeeeeccCcee------eEEEEeCCeEeeec-------c-cc---eeeEEEEccCCCCCcEEEEEEEEcCCCCce
Q psy7040 630 NYLQELHSSLMPISL------ESQYLMNDKRVTID-------N-VD---YFTKITIRPLQRSDTAQYTVTATNSQGKDQ 691 (716)
Q Consensus 630 ~y~v~~~~~~~~~~~------~~~W~~~~~~~~~~-------~-~~---~~~~~~i~~l~~~~~y~y~~~a~n~~G~~~ 691 (716)
.|.+.| .+.|+++|+.+... . .+ ....|.|..+..+|.|.|+|.|.|.+|...
T Consensus 241 ---------~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~~~~~ 310 (327)
T 2wng_A 241 ---------TCQVRKFYPQRLQLTWLENGNVSRTETASTVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAV 310 (327)
T ss_dssp ---------EEEEEEEBSSCEEEEEEETTEEEEEEECCSCEECTTSCEEEEEEEEC-------CCEEEEEEEETTCCCE
T ss_pred ---------EEEEccccCCCcEEEEEECCeEccCcccCceEECCCCcEEEEEEEEEccccccCCCEEEEEEEeCCCCCc
Confidence 444444 58999999988653 1 11 114588999999999999999999998763
No 128
>4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}
Probab=99.56 E-value=4.7e-15 Score=137.41 Aligned_cols=155 Identities=21% Similarity=0.266 Sum_probs=96.7
Q ss_pred CCccceEEEEEEeCCCCCeEEccccCcccceEEEcCCCCCCeEEEEEEEEcCCCCCCCCcccceEEecCCCCCCCCCCCc
Q psy7040 252 GQPIEKYVVDKMDEATGRWTPAGETEGPVTGLEVEGLIPNHKYKFRVRAVNKQGKSEPLTTTASIEAKNPFNQPGKPGTP 331 (716)
Q Consensus 252 ~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~ 331 (716)
+..+++|.+++...... +..... ....+++.+.+|.|++.|.|+|+|.|..|.+..+......+ ....+|.+| .+
T Consensus 19 ~~~Vt~Y~~~~~~~~~~-~~~~~~-~~~~t~~~~~~L~p~t~Y~frV~A~n~~G~g~~s~~~~~~t--~~~~~~~~~-~~ 93 (232)
T 4go6_B 19 NVMVTHYFLPPDDAVPS-DDDLGT-VPDYNQLKKQELQPGTAYKFRVAGINACGRGPFSEISAFKT--CLPGFPGAP-CA 93 (232)
T ss_dssp EEEECEEECCCC--------------------CEEECCTTCEEEEEEEEEETTEEEEECCCEEEEC--CCTTSCCCC-EE
T ss_pred CEEEEEEEEEeeCCCCC-cEEEEE-CCCccEEEeCCCCCCCEEEEEEEEEeCCCccccccceeeee--cCCCCCCCC-ee
Confidence 34577888876543322 222222 24467899999999999999999999999987776653222 222334444 44
Q ss_pred EEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCc-------------eEEEeeecCCCCe-------EEecCCCC
Q psy7040 332 EIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPI-------------WEKCAQTEGDTPK-------GKVLDLIE 391 (716)
Q Consensus 332 ~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~-------------~~~~~~~~~~~~~-------~~i~~l~~ 391 (716)
.....+.+++.|+|.+|..++| +|.+|.|+++..+... |............ ..+.+|.+
T Consensus 94 ~~~~~~~~sv~l~W~~P~~~~G-~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~ 172 (232)
T 4go6_B 94 IKISKSPDGAHLTWEPPSVTSG-KIIEYSVYLAIQSSQAGGELKSSTPAQLAFMRVYCGPSPSCLVQSSSLSNAHIDYTT 172 (232)
T ss_dssp EEEEEETTEEEEEEECCSCCSS-CCCEEEEEEEEC-------------CCEEEEEEEEESSSEEEEEHHHHTTBCBEESS
T ss_pred eEEecCCCEEEEEEeCCCCCCC-ceeeEEEEEEECCCCCcceeeeccCCceeeEEEEeccCceEEEEccccEEeeecCcc
Confidence 5556788999999999887665 8999999998765332 2222211111122 23457899
Q ss_pred CCeEEEEEEEEeCCCCCCCCC
Q psy7040 392 GNQYEFRVLAVNKGGPGEPSD 412 (716)
Q Consensus 392 ~~~Y~~~v~a~n~~g~~~~s~ 412 (716)
++.|.|+|+|.|..|.|++|+
T Consensus 173 ~t~Y~frV~A~N~~G~Gp~S~ 193 (232)
T 4go6_B 173 KPAIIFRIAARNEKGYGPATQ 193 (232)
T ss_dssp SEEEEEEEEEECSSCBCCCEE
T ss_pred CCceEEEEEEECCCcCCCCcc
Confidence 999999999999999998775
No 129
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.54 E-value=2.7e-14 Score=138.62 Aligned_cols=251 Identities=12% Similarity=0.019 Sum_probs=139.3
Q ss_pred ccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCC-CeEEEEECCCCCCCceeEEEEEEcCCCc---ee
Q psy7040 434 SDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDD-KSTKLKVFDSKRGDSGIYTLAVKNSWGT---DK 509 (716)
Q Consensus 434 ~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~-~~~~l~i~~l~~~~~~~y~~~a~n~~g~---~~ 509 (716)
..+.+.+|+.+.|.|.+.+. +.|++++..+. ........+ ....|.|.++...|.|.|+|.|.|..|. ..
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~~~--~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~ 81 (289)
T 3mjg_X 8 PELVLNVSSTFVLTCSGSAP----VVWERMSQEPP--QEMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHNDSRGLETDER 81 (289)
T ss_dssp SEEECCTTCCEEEEEEESSC----CEEEBTTBCCS--EEEEECTTSCEEEEEEECSCCGGGCEEEEEECCC------CCC
T ss_pred CeEEEeCCCcEEEEEeccce----EEEECCCCCcc--cceeccCCCceeEEEEEccCChhhCEEEEEEEcccCCCCcCcE
Confidence 35778999999999998875 99999998762 122222222 1468999999999999999999998876 22
Q ss_pred eEEEEEEEEEEEEEeCC--------CCCCCCceeeEEEEEEecCCCceeeeEEEccceeeeeccccceeEEEEcCCCCCC
Q psy7040 510 GTAKVTVLGCSLKWNPP--------EDDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDNVDYFTKITIRPLQRSD 581 (716)
Q Consensus 510 ~s~~~~v~~v~l~W~~p--------~~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~i~~L~~~~ 581 (716)
.+..+.+......+.+. ...+......|.+. .+.+...|..................+. ...+
T Consensus 82 ~~~~v~v~~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~-----~p~~~v~w~~~~~~~~~~~~~~~~~~~~----~~~d 152 (289)
T 3mjg_X 82 KRLYIFVPDPTVGFLPNDAEELFIFLTEITEITIPCRVT-----DPQLVVTLHEKKGDVALPVPYDHQRGFS----GIFE 152 (289)
T ss_dssp EEEEEECCCTTCCBCCCCHHHHEEEESSCCCEEECCCBS-----CTTSCEEEEESSCCSCCCCCEETTTEEE----ECCC
T ss_pred EeEEEEEECCCcCcccCCCCcceEEeecCCeEEEEeEcC-----CCCceEEEEeCCCCCccceeecCCcCee----eecc
Confidence 33333322000000000 00111112222222 2334588887652221110000011122 3567
Q ss_pred eEEEEEEEEcCCCCCccc-eeeeccCCCCCCccceeeccceeEEEEEEeeEEEEeeeeccCcee----eEEEEeCCeEee
Q psy7040 582 TAQYTVTATNSQGKDQVF-IEVVVTDKPSAPEGPIQWLLTLTDVTWEISNYLQELHSSLMPISL----ESQYLMNDKRVT 656 (716)
Q Consensus 582 ~y~~~v~a~n~~G~~~~s-~~~~v~~~p~~~~~~~~~~~~~v~l~w~i~~y~v~~~~~~~~~~~----~~~W~~~~~~~~ 656 (716)
.+.|+|.|.|..|..... ..+.+..+ ..|. +...... ..+ ..|-.+ .|.|.+.| .+.|+++++...
T Consensus 153 ~G~Y~C~a~n~~~~~~s~~~~l~v~~~-~~p~-i~~~~~~-~~v---~~G~~v---~L~C~~~g~p~p~v~W~~~~~~~~ 223 (289)
T 3mjg_X 153 DRSYICKTTIGDREVDSDAYYVYRLQV-SSIN-VSVNAVQ-TVV---RQGENI---TLMCIVIGNEVVNFEWTYPRKESG 223 (289)
T ss_dssp SSEEEEEEEETTEEEECCCEEEEECCC-CCCC-CEEEESC-SEE---ETTSCE---EEEEEEESCSSBEEEEECTTSSSS
T ss_pred CcEEEEEEEeCCceeeeeeEEEEecCC-CCCC-cEEeCCc-cee---EcCCCE---EEEEEECCCCCcceEEEcCCccCC
Confidence 899999999876543222 22333331 1222 2111111 110 011112 25666655 899997665322
Q ss_pred ec-----------ccceeeEEEEccCCCCCcEEEEEEEEcCCCCceeeEEEEEecCCCCCCCC
Q psy7040 657 ID-----------NVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTDKPSAPEGP 708 (716)
Q Consensus 657 ~~-----------~~~~~~~~~i~~l~~~~~y~y~~~a~n~~G~~~~s~~l~v~~~p~~p~~p 708 (716)
.. .......|.|.++...|+|.|+|.|.|..|....+..|.|...|.....+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~~~~~~~~ 286 (289)
T 3mjg_X 224 RLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDHQDEKAINITVVESGHHHH 286 (289)
T ss_dssp CCCCCEEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEEETTTTEEEEEEEEEEEEC------
T ss_pred CcccccccccCCcceEEEEEEEEcccChhhCcEEEEEeecCCCCceeEEEEEEEEEecCcccc
Confidence 21 12344789999999999999999999999999999999999988776543
No 130
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.54 E-value=1.3e-14 Score=144.48 Aligned_cols=248 Identities=15% Similarity=0.128 Sum_probs=158.2
Q ss_pred cccEEEecCCeEEEEEEEe-------ccCCCeEEEEeCCeEe--ccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEc
Q psy7040 433 LSDIKVRAGSNFEFDINVI-------GEPIPTKEWLCNDITI--ISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKN 503 (716)
Q Consensus 433 ~~~~~~~~g~~~~~~~~v~-------~~p~~~~~W~~~~~~~--~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n 503 (716)
+..+.+.+|+.+.|.|.+. +.|.+.+.|++++..+ ......++... ...|.|.++...|.|.|+|.|.|
T Consensus 25 ~~~~~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~--~~~L~i~~v~~~D~G~Y~C~~~n 102 (339)
T 3o4o_C 25 YKREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWAQ--DGALWLLPALQEDSGTYVCTTRN 102 (339)
T ss_dssp SCCEEEETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSCCSSSCEEEE--TTEEEESSBCTTCCEEEECCEEE
T ss_pred ceEEEEECCccEEEEeccccccccccCCCCceEEEEECCCCcccCccccccEEee--CCeEEECCCCcccCEEEEEEEEC
Confidence 4568899999999999998 8899999999998873 33212233222 23799999999999999999999
Q ss_pred CCCceeeEEEEEEEE----------EEEEEeCCCCCCCCceeeEEEEEE-----ecCCCceeeeEEEccceeeeec----
Q psy7040 504 SWGTDKGTAKVTVLG----------CSLKWNPPEDDGGAPIEYYMVEKM-----ETDTGKVLIKWIRTNDKRVTID---- 564 (716)
Q Consensus 504 ~~g~~~~s~~~~v~~----------v~l~W~~p~~~~~~~i~~y~v~~~-----~~~~~~~~~~w~~~~~~~~~~~---- 564 (716)
..|....+..+.+.. ..... ..+.. ..+... ..+.+.+.+.|++.+.......
T Consensus 103 ~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~----~~g~~----v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~~~~~ 174 (339)
T 3o4o_C 103 ASYCDKMSIELRVFENTDAFLPFISYPQIL----TLSTS----GVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNEKFL 174 (339)
T ss_dssp TTEEEEEEEEEEEECSCGGGHHHHCEEEEE----ETTSC----EEEECCSCTTTCCSSSCCCBCCEESSCBCCTTCSSEE
T ss_pred CcceEEEEEEEEEEcCCCccccccccceEE----ECCCC----EEEEecCCcccccCCCCceEEEecCCeeCCCCCceeE
Confidence 998777777777660 01100 01111 222332 2223445589998765443110
Q ss_pred cccceeEEEEcCCCCCCeEEEEEEEEcCCCCCc----cceeeeccCCC--CCCccceeeccceeEEEEEEeeEEEEeeee
Q psy7040 565 NVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQ----VFIEVVVTDKP--SAPEGPIQWLLTLTDVTWEISNYLQELHSS 638 (716)
Q Consensus 565 ~~~~~~~~~i~~L~~~~~y~~~v~a~n~~G~~~----~s~~~~v~~~p--~~~~~~~~~~~~~v~l~w~i~~y~v~~~~~ 638 (716)
.......+.|.++...+.+.|+|.|.|..|... ....+.|..++ ..|. +.... ..+.+. .|- -..|
T Consensus 175 ~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~~~~P~-i~~~~-~~~~v~---~G~---~v~L 246 (339)
T 3o4o_C 175 SVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPV-IISPL-KTISAS---LGS---RLTI 246 (339)
T ss_dssp ECTTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCCCCCCCE-ECCCS-CCCCCC---CCS---CCCC
T ss_pred EcCCcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCCCCCCE-EecCC-ceeEec---cCC---CEEE
Confidence 111225799999999999999999999887432 22233343322 1222 21111 111000 111 1127
Q ss_pred ccCc---ee-----eEEEEeCCeEeeec---------------ccce---eeEEEEccCCCCCc-EEEEEEEEcCCCCce
Q psy7040 639 LMPI---SL-----ESQYLMNDKRVTID---------------NVDY---FTKITIRPLQRSDT-AQYTVTATNSQGKDQ 691 (716)
Q Consensus 639 ~~~~---~~-----~~~W~~~~~~~~~~---------------~~~~---~~~~~i~~l~~~~~-y~y~~~a~n~~G~~~ 691 (716)
.|.+ .| .+.|+++|..+... ..+. ...|.|.++...|. |.|+|.|.|..|...
T Consensus 247 ~C~~~~~~g~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~ 326 (339)
T 3o4o_C 247 PCKVFLGTGTPLTTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVTREDLHMDFKCVVHNTLSFQT 326 (339)
T ss_dssp CCCEEESSSCCSSCEEEEESSSSCSSSSSCSSSCEECCCEECCCSSSCEEEECCEECSSCCCSCCCCCEEEEEETTEEEC
T ss_pred EEEEECCCCCCCCceEEEEECCeecccccccccceecceEEecccCceEEEEEEEEEEechhhcCccEEEEEEeccCceE
Confidence 7877 44 79999998765321 0000 12799999999997 999999999999988
Q ss_pred eeEEEEE
Q psy7040 692 VFIEVVV 698 (716)
Q Consensus 692 ~s~~l~v 698 (716)
....+.+
T Consensus 327 ~~~~~~~ 333 (339)
T 3o4o_C 327 LRTTVKE 333 (339)
T ss_dssp CBCCCCC
T ss_pred EEEEhhH
Confidence 7766543
No 131
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.53 E-value=5.6e-13 Score=129.48 Aligned_cols=229 Identities=17% Similarity=0.212 Sum_probs=152.9
Q ss_pred CceEEEEecCCccEEEEeccccCcceEEEEEEEeCCCCc-eeEEEEEEecCCCCCCCCeEEeEEeCCeEEEEEECCCCCC
Q psy7040 173 GMVRKVQHLDYNTKLGVRMAQRADAGFYTVTAENINGKD-SVEVEVIVLDKPSPPGGPLKVSNVHAEGVTLDWKVPDDDG 251 (716)
Q Consensus 173 ~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~-~~~~~~~v~~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~ 251 (716)
..++.+...+....|.|.++...|+|.|+|.|.|..|.. +..+.+.+..+|.....+-......+..+.|.|.....
T Consensus 48 ~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~-- 125 (291)
T 2wim_A 48 TQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSS-- 125 (291)
T ss_dssp BTTEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSSCEEEEEEEEEEECCCBCCSCCCSEEEETTSCEEECCCCBCS--
T ss_pred CCcEEEecCCCEEEEEEccCCcccCEEEEEEEecccCceEEEEEEEEecCCcceEeCCCChhhcCCCCEEEEEEEccC--
Confidence 455666666667899999999999999999999999985 46777888777755443334445678899999986322
Q ss_pred CCccceEEEEEEeC-----CCCCeEEccccCcccceEEEcCCCCCCeEEEEEEEEcCCCCCCCCcccceEEecCCCCCCC
Q psy7040 252 GQPIEKYVVDKMDE-----ATGRWTPAGETEGPVTGLEVEGLIPNHKYKFRVRAVNKQGKSEPLTTTASIEAKNPFNQPG 326 (716)
Q Consensus 252 ~~~~~~y~v~~~~~-----~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p~ 326 (716)
+...+.+..... ....... .....+.|.++...+.+.|+|.|.|..+......
T Consensus 126 --p~~~v~W~~~~~~~~~~~~~~~~~-----~~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~~~~--------------- 183 (291)
T 2wim_A 126 --PAPAVSWLYHNEEVTTISDNRFAM-----LANNNLQILNINKSDEGIYRCEGRVEARGEIDFR--------------- 183 (291)
T ss_dssp --SCCEEEEECC----CBCCCSSEEE-----CTTSCEEETTCCGGGCEEEEEEEEETTTTEEEEE---------------
T ss_pred --CCCEEEEEECCccccccCCceEEE-----ccCCCEEEEecchhhCEEEEEEEEECCCCeeEEe---------------
Confidence 222232222111 0111111 1245799999999999999999987543210000
Q ss_pred CCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEEeCCC
Q psy7040 327 KPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGG 406 (716)
Q Consensus 327 ~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g 406 (716)
.+.|.-..
T Consensus 184 -------------~~~~~v~~----------------------------------------------------------- 191 (291)
T 2wim_A 184 -------------DIIVIVNV----------------------------------------------------------- 191 (291)
T ss_dssp -------------EEEEEEEB-----------------------------------------------------------
T ss_pred -------------eEEEEecc-----------------------------------------------------------
Confidence 00000000
Q ss_pred CCCCCCCCCceEeecCCCCCcccc-cccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEE
Q psy7040 407 PGEPSDPTAPHIARAKKVSPYINR-DQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLK 485 (716)
Q Consensus 407 ~~~~s~~~~~~~~~~~~~~P~~~~-~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~ 485 (716)
+|.+.. .......+..|..+.|.|.+.+.|.+.+.|++++..+....++.+. .....|.
T Consensus 192 ------------------~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~--~~~~~L~ 251 (291)
T 2wim_A 192 ------------------PPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILK--GSNTELT 251 (291)
T ss_dssp ------------------CCCCBCSCSEEECCSSSCCEEEEECBCCCBSCCEEEEEETTEECCCTTTEEEC--STTCEEE
T ss_pred ------------------CCccccCcccccceecCCCeEEEEEEeecCCCCeEEEEECCEECcCCccEEEc--CCccEEE
Confidence 000000 0000123456888899999999999999999999998877766553 3346899
Q ss_pred ECCCCCCCceeEEEEEEcCCCceeeEEEEEEE
Q psy7040 486 VFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVL 517 (716)
Q Consensus 486 i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v~ 517 (716)
|.++...|.|.|+|.|.|..|....++.+.+.
T Consensus 252 i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~ 283 (291)
T 2wim_A 252 VRNIINSDGGPYVCRATNKAGEDEKQAFLQVF 283 (291)
T ss_dssp EESCCSTTCEEEEEEEEETTEEEEEEEEEEC-
T ss_pred EeeCCcccCEEEEEEEEECCCceeeeEEEEEE
Confidence 99999999999999999999999888877765
No 132
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.52 E-value=2.5e-14 Score=139.23 Aligned_cols=253 Identities=14% Similarity=0.175 Sum_probs=153.1
Q ss_pred CCcccccccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcC
Q psy7040 425 SPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNS 504 (716)
Q Consensus 425 ~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~ 504 (716)
+|.|.. ....+.+.+|+.+.|.|.+.+. +.|+++.. ....+...+....|.|.++...|.|.|+|.|.|.
T Consensus 4 ~P~i~~-~~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~-----~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~ 73 (292)
T 4dkd_C 4 IPVIEP-SVPELVVKPGATVTLRCVGNGS----VEWDGPPS-----PHWTLYSDGSSSILSTNNATFQNTGTYRCTEPGD 73 (292)
T ss_dssp CCEEES-CCSSCEECTTCCEEEEEECSSC----CCBCCCCC-----SSCEECCBTTEEEEEESSCCGGGCSCEEECCCC-
T ss_pred CceecC-CCCeEEEcCCCcEEEEEcCCCc----eEEccCCC-----CceEEeccCceEEEEEcccccccCEEEEEEEccC
Confidence 444432 2345689999999999998774 89996543 2334445556779999999999999999999998
Q ss_pred CCceeeEEEEEEEEEEEEEe-CCC----CCCCCceeeEEEEEEecCCCceeeeEEEccceeeeec---cccceeEEEEcC
Q psy7040 505 WGTDKGTAKVTVLGCSLKWN-PPE----DDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTID---NVDYFTKITIRP 576 (716)
Q Consensus 505 ~g~~~~s~~~~v~~v~l~W~-~p~----~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~---~~~~~~~~~i~~ 576 (716)
.|..+..+.+.+......+. .+. ..+......|.+.. +. ..+.+.|++.+....... .......+.|.+
T Consensus 74 ~~~~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~l~C~~~~-~~--~~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~ 150 (292)
T 4dkd_C 74 PLGGSAAIHLYVKDPARPWNVLAQEVVVFEDQDALLPCLLTD-PV--LEAGVSLVRVRGRPLMRHTNYSFSPWHGFTIHR 150 (292)
T ss_dssp ---CCEEECCEECCSSCCEEESCSEEEEETTSCEECCEEESS-GG--GGSSEEEEEGGGCCCCSSCCEECCSSSCCEETT
T ss_pred CCCcceEEEEEEcCccccccccCCeEEEcCCCcEEEeeeCCC-CC--cceeEEEEecCCCccccCCcccccCCceEEECC
Confidence 88777777666651000000 000 11122233444332 11 113489998743221110 111224489999
Q ss_pred CCCCCeEEEEEEEEcCCCCCcc-ceeeeccCC-CCCCccceee-------ccceeEEEEEEeeEEEEeeeeccCcee---
Q psy7040 577 LQRSDTAQYTVTATNSQGKDQV-FIEVVVTDK-PSAPEGPIQW-------LLTLTDVTWEISNYLQELHSSLMPISL--- 644 (716)
Q Consensus 577 L~~~~~y~~~v~a~n~~G~~~~-s~~~~v~~~-p~~~~~~~~~-------~~~~v~l~w~i~~y~v~~~~~~~~~~~--- 644 (716)
+...+.+.|+|.|.|..|.... ...+.|... +..|. +... .+..+. |.|.+.+
T Consensus 151 ~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~-i~~~~~~~~~~~g~~v~--------------l~C~~~~~~~ 215 (292)
T 4dkd_C 151 AKFIQSQDYQCSALMGGRKVMSISIRLKVQKVIPGPPA-LTLVPAELVRIRGEAAQ--------------IVCSASSVDV 215 (292)
T ss_dssp CCGGGCSEEEEEECSTTSCEECCCEEEEEECCCCSSCE-EEEESSCBCCCSSSCEE--------------EEEEEEESSS
T ss_pred CCHHHCeEEEEEEEeCCCceeEEEEEEEEeCCCCCCCe-EEccCCceeEecCCCEE--------------EEEEecCCCC
Confidence 9999999999999998764322 333445432 22332 2211 233344 5555555
Q ss_pred --eEEEEeCCeEeeec--------ccceeeEEEEccCCCCCcEEEEEEEEcCCCCceeeEEEEEecCCCCC
Q psy7040 645 --ESQYLMNDKRVTID--------NVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTDKPSAP 705 (716)
Q Consensus 645 --~~~W~~~~~~~~~~--------~~~~~~~~~i~~l~~~~~y~y~~~a~n~~G~~~~s~~l~v~~~p~~p 705 (716)
.+.|++++..+... .......|.|.++...|+|.|+|.|.|..|....+..|.|.....++
T Consensus 216 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~~~~~ 286 (292)
T 4dkd_C 216 NFDVFLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTSMFFRVVESAGNS 286 (292)
T ss_dssp CCEEECCBSSCCCCCCBEEEEETTEEEEEEEEEESSCCTTSCEEEEEEEECSSCEEEEEEEECC-------
T ss_pred ceEEEEeCCCcccccCccceeccceeeeEEEEEECccChhcCeEEEEEEecCCCCceeEEEEEEeeCCCcc
Confidence 67888888755432 11122589999999999999999999999999999999998877665
No 133
>3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens}
Probab=99.51 E-value=4.2e-13 Score=120.91 Aligned_cols=179 Identities=15% Similarity=0.167 Sum_probs=124.5
Q ss_pred CCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCCCCCeEEccccCcccceEEEcCCCCCCeEEEEEEEEcCC
Q psy7040 225 PPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEATGRWTPAGETEGPVTGLEVEGLIPNHKYKFRVRAVNKQ 304 (716)
Q Consensus 225 ~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~ 304 (716)
+|.+ +.+... +....|.|++|...++ .+ .|.|+++.. ..|...- .......+.|.+|.++..|.++|+|.+..
T Consensus 4 ~P~n-v~~~s~-n~~~iL~W~pp~~~~~-~v-~Y~V~y~~~--~~w~~~c-~~~~~~~c~lt~l~~~~~Y~~rV~A~~~~ 76 (201)
T 3lqm_A 4 PPEN-VRMNSV-NFKNILQWESPAFAKG-QL-TFTAQYLSY--RIFQDKC-MQTTLTECDFSSLSKYGDHTLRVRAEFAD 76 (201)
T ss_dssp CCEE-EEEEEE-TTEEEEEEECCCCSSS-CC-EEEEEEEET--TEEEEEE-EEESSSEEECTTSCSSSCEEEEEEEEETT
T ss_pred CCcc-cEEEEE-CCceEEEECCCCCCCC-Ce-EEEEEEEEC--CCcccCc-CccCCCEEECCCCccCCCEEEEEEEecCC
Confidence 4555 666544 4567899998876555 34 599999875 3576322 12356889999999999999999999988
Q ss_pred CCCCCCcccceEEecCCCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCc---------cceEEEEEEeecCCCceEEEe
Q psy7040 305 GKSEPLTTTASIEAKNPFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGS---------PIVGYIIEKKEKYSPIWEKCA 375 (716)
Q Consensus 305 g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~---------~i~~y~v~~~~~~~~~~~~~~ 375 (716)
|.|.++.. .+.. .....+++| .+.+ ...+++|.|.|.+|...+++ .+..|.|.|...++.....
T Consensus 77 ~~S~~s~~--~f~~-~~~t~~~PP-~v~~-~~~~~si~v~w~~P~~~~~~~~~~~~~~~~~l~Y~v~y~~~~~~~~~~-- 149 (201)
T 3lqm_A 77 EHSDWVQI--TFSP-VDDTIIGPP-GMQV-EVLADCLHMRFLAPKIENEYETWTMKNVYNSWTYNVQYWKQGTDEKFQ-- 149 (201)
T ss_dssp EECCCEEE--EECH-HHHSBCCCC-EEEE-EEETTEEEEEEECCEEECSSCEEEHHHHCTTCEEEEEEEETTCCCCEE--
T ss_pred CcCcceee--eeee-cccCeeCCC-EEEE-EEeCCEEEEEEcCCCccCCCcccCHHHhCCceEEEEEEEECCCCcEEE--
Confidence 77766542 1111 111334555 5777 45678999999998644322 3789999887765433222
Q ss_pred eecCCCCeEEecCCCCCCeEEEEEEEEeC--CCCCCCCCCCCceE
Q psy7040 376 QTEGDTPKGKVLDLIEGNQYEFRVLAVNK--GGPGEPSDPTAPHI 418 (716)
Q Consensus 376 ~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~--~g~~~~s~~~~~~~ 418 (716)
.......+.|.+|.|++.|.|+|+|.+. .|.|.+|......+
T Consensus 150 -~~~~~~~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T 193 (201)
T 3lqm_A 150 -ITPQYDFEVLRNLEPWTTYCVQVRGFLPDRNKAGEWSEPVCEQT 193 (201)
T ss_dssp -ECCSSSEEEECSCCTTCEEEEEEEEEETTTTEECCCCCCEEEEC
T ss_pred -EEecCceEEEecCCCCCcEEEEEEEEeccCCCCCCcCCCEeEEe
Confidence 2345678999999999999999999996 56777776654444
No 134
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.50 E-value=2.7e-12 Score=116.37 Aligned_cols=185 Identities=23% Similarity=0.349 Sum_probs=124.2
Q ss_pred CCcccccccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccC-CcEEEEe-CCCeEEEEECCCCCCCceeEEEEEE
Q psy7040 425 SPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISK-DRFKIVN-DDKSTKLKVFDSKRGDSGIYTLAVK 502 (716)
Q Consensus 425 ~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~-~~~~~~~-~~~~~~l~i~~l~~~~~~~y~~~a~ 502 (716)
+|.+. ..+..+.+..|+.+.|.|.+.+.|.+.+.|++++..+... .++.+.. .+....|.|.++...|.|.|+|.|.
T Consensus 4 ~P~~~-~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 82 (197)
T 2j8h_A 4 APHFK-EELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRAT 82 (197)
T ss_dssp CCEEE-ECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEEE
T ss_pred CCEEE-EcCCccEEcCCCEEEEEEEEeecCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEEE
Confidence 45543 2345688999999999999999999999999999887643 4555443 4556799999999999999999999
Q ss_pred cCCCceeeEEEEEEEEEEEEEeCCCCCCCCceeeEEEEEEecCCCceeeeEEEccceeeeeccccceeEEEEcCCCCCCe
Q psy7040 503 NSWGTDKGTAKVTVLGCSLKWNPPEDDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDNVDYFTKITIRPLQRSDT 582 (716)
Q Consensus 503 n~~g~~~~s~~~~v~~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~i~~L~~~~~ 582 (716)
|..|.......+.+..... ...+.. +. .. ... .+..|..
T Consensus 83 n~~g~~~~~~~l~V~~~p~-~~~~~~-----~~-----------------------~~---------~~~---~~~~g~~ 121 (197)
T 2j8h_A 83 NQGGSVSGTASLEVEVPAK-IHLPKT-----LE-----------------------GM---------GAV---HALRGEV 121 (197)
T ss_dssp ETTEEEEEEEEEEEEEEEE-ECCSSC-----BT-----------------------TB---------EEE---EEETTCC
T ss_pred ECCCceeEEEEEEEcCCCc-CCCCcc-----cc-----------------------cc---------CeE---EEeCCCE
Confidence 9887665554444431000 000000 00 00 000 0122333
Q ss_pred EEEEEEEEcCCCCCccceeeeccCCCCCCccceeeccceeEEEEEEeeEEEEeeeeccCceeeEEEEeCCeEeeec----
Q psy7040 583 AQYTVTATNSQGKDQVFIEVVVTDKPSAPEGPIQWLLTLTDVTWEISNYLQELHSSLMPISLESQYLMNDKRVTID---- 658 (716)
Q Consensus 583 y~~~v~a~n~~G~~~~s~~~~v~~~p~~~~~~~~~~~~~v~l~w~i~~y~v~~~~~~~~~~~~~~W~~~~~~~~~~---- 658 (716)
..+.|.+.. . | +. .+.|++++..+...
T Consensus 122 ~~l~C~~~g---~------------p--~p--------------------------------~i~W~~~~~~~~~~~~~~ 152 (197)
T 2j8h_A 122 VSIKIPFSG---K------------P--DP--------------------------------VITWQKGQDLIDNNGHYQ 152 (197)
T ss_dssp CEEEEEEEE---E------------S--CC--------------------------------EEEEEESSCEECSSSSCE
T ss_pred EEEEEEEEe---c------------C--CC--------------------------------cEEEEECCEEeecCCCEE
Confidence 444454421 0 0 00 57889988877644
Q ss_pred --ccceeeEEEEcc-CCCCCcEEEEEEEEcCCCCceeeEEEEEec
Q psy7040 659 --NVDYFTKITIRP-LQRSDTAQYTVTATNSQGKDQVFIEVVVTD 700 (716)
Q Consensus 659 --~~~~~~~~~i~~-l~~~~~y~y~~~a~n~~G~~~~s~~l~v~~ 700 (716)
.......|.|.+ +...|.|.|+|.|.|..|....+..|.|.+
T Consensus 153 ~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~d 197 (197)
T 2j8h_A 153 VIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVAD 197 (197)
T ss_dssp EEECSSEEEEECTTCCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEcCCceEEEEeCCCCcccCEeEEEEEEeCCCcEeEEEEEEEeC
Confidence 112346899999 999999999999999999998888888864
No 135
>3qt2_A Interleukin-5 receptor subunit alpha; cytokine type I receptor fold, fibronectin type III modules, helical bundle, cytokine, ligand-receptor complex; HET: BGC; 2.55A {Homo sapiens} PDB: 3va2_C
Probab=99.50 E-value=8.4e-11 Score=112.90 Aligned_cols=277 Identities=14% Similarity=0.093 Sum_probs=170.2
Q ss_pred CCCCCCceEEEEeCCeEEEEecCCCCCCC-CccceEEEEEEcCCCCcEEEecccCCCeEEecCCCCCcEEEEEEEEEecC
Q psy7040 55 LDPEGPLEVSNIHKDGCTLKWNKPKDDGG-EPLEGYLVEKYDPETGVWIPVGKTREPEMDVTGLTPGHEYKFRVKALNKE 133 (716)
Q Consensus 55 ~~p~~~l~~~~~~~~s~~l~W~~p~~~~~-~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~~~~ 133 (716)
+.||.+|.+...+...+.|+|++|....+ ..-..|.|.++..+...|..... .......|..+ |.++|++....
T Consensus 12 ~~pP~nl~i~~~~~~~~~l~W~~~p~~~~~~~~l~Y~v~~~~~~~~~w~~~~t---~~~~~~~L~~~--~~~rVrt~~~~ 86 (317)
T 3qt2_A 12 LLPPVNFTIKVTGLAQVLLQWKPNPDQEQRNVNLEYQVKINAPKEDDYETRIT---ESKAVTILHMG--FSASVRTILQN 86 (317)
T ss_dssp CCCCEEEEEEEEETTEEEEEEECCTTSSCSSSCCEEEEEEEESSCEEEEESSS---EEEEECCCTTC--EEEEEEEEEEC
T ss_pred cCCCcceEEEECCCceEEEEECCCCccccCcCcEEEEEEECCCCCcccEeecc---ccccccccCCC--eEEEEEEEECC
Confidence 56888888888888999999999432222 22467999999888888886543 33446667554 99999998765
Q ss_pred ccCC-CccccceEEecCCCCcccccccccceecccCCCCCCceEEEEecCCccEEEEeccccCcceEEEEEEEeCCCCce
Q psy7040 134 GESE-PLETFSSIIARDPYSKYTSVSSLDSHKRSNQPCGSGMVRKVQHLDYNTKLGVRMAQRADAGFYTVTAENINGKDS 212 (716)
Q Consensus 134 g~~~-~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~G~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~ 212 (716)
|.+. +|..+..+...++ .
T Consensus 87 ~~s~~~S~w~~~~~~~~~-G------------------------------------------------------------ 105 (317)
T 3qt2_A 87 DHSLLASSWASAELHAPP-G------------------------------------------------------------ 105 (317)
T ss_dssp SSCEEECCCEEEEECCCS-C------------------------------------------------------------
T ss_pred CCCccccccccccccCCC-C------------------------------------------------------------
Confidence 5322 3333322222111 1
Q ss_pred eEEEEEEecCCCCCCCCeEEeEEe-----------CCeEEEEEECCCCCCCCccceEEEEEEeCCCCCeEEcccc--Cc-
Q psy7040 213 VEVEVIVLDKPSPPGGPLKVSNVH-----------AEGVTLDWKVPDDDGGQPIEKYVVDKMDEATGRWTPAGET--EG- 278 (716)
Q Consensus 213 ~~~~~~v~~~p~~p~~~~~~~~~~-----------~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~--~~- 278 (716)
.+|..|.+ +.+.... ...++.+|.+ ..+.. .-+.|.+.+...+ .+..|... ..
T Consensus 106 --------~p~~~p~n-lsC~~~~~~~~~~~~~~~~~~l~CtW~p-G~~~~-~~t~Y~L~y~~~~--~~~eC~~y~~~~~ 172 (317)
T 3qt2_A 106 --------SPGTSIVN-LTCTTNTTEDNYSRLRSYQVSLHCTWMV-GTDAP-EDTQYFLYYRYGS--WTEECQEYSMDTL 172 (317)
T ss_dssp --------BGGGSCEE-EEEEEEEEECSCSSSCCEEEEEEEEEEC-CTTCC-TTCEEEEEEEETT--EEEECCCEEECTT
T ss_pred --------CCCCccee-eEEEEccccccccccccccceEEEEeeC-CCCCC-CCeeEEEEEEeCC--CCeeCCccccCCC
Confidence 13445555 5554444 3679999995 32222 3467988887654 35666422 11
Q ss_pred -ccceEEEcCCC----CCCeEEEEEEEEcCCCCCCCCcccceEEecCCCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCC
Q psy7040 279 -PVTGLEVEGLI----PNHKYKFRVRAVNKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGG 353 (716)
Q Consensus 279 -~~~~~~i~~L~----p~~~y~~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~ 353 (716)
....+.+.... ....|.|.|.+.+..+...... ..........|.+|.++.+. ...+.+.|+|.+|...-.
T Consensus 173 ~~~~~C~f~~~~~~~~~~~~~~i~V~gss~~~~i~s~~---~~~~l~~iVkp~PP~nL~v~-~~~~~l~v~W~~P~~~~~ 248 (317)
T 3qt2_A 173 GRNIACWFPRTFILSKGRDWLAVLVNGSSKHSAIRPFD---QLFALHAIDQINPPLNVTAE-IEGTRMSIQWEKPVSAFP 248 (317)
T ss_dssp SCEEEEEESSCSCCTTCCSEEEEEEEEECTTSCBCCEE---EEEEHHHHBCCCCCEEEEEE-EETTEEEEEEECCSSSSC
T ss_pred cceeEEEeCCccccccCcEEEEEEEEcCCCCccccccc---eEEEHHHcCcCCCCceeEEE-EeCCcEEEEECCCCcccc
Confidence 23467776653 3467888888766444322111 11111122457888889888 446899999998743211
Q ss_pred ccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEEeCC---CCCCCCCCCCceE
Q psy7040 354 SPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKG---GPGEPSDPTAPHI 418 (716)
Q Consensus 354 ~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~---g~~~~s~~~~~~~ 418 (716)
..-..|+|.|+......+.... . ...++.+ .|.+++.|.++|+|.... +.|.+|+.+..+.
T Consensus 249 ~~~L~Yevryr~~~~~~~~~~~-~--~~~~~~l-~l~p~~~Y~vqVR~k~~~~~~~~g~WSeWS~~~~ 312 (317)
T 3qt2_A 249 IHCFDYEVKIHNTRNGYLQIEK-L--MTNAFIS-IIDDLSKYDVQVRAAVSSMCREAGLWSEWSQPIY 312 (317)
T ss_dssp GGGEEEEEEEEETTTCCEEEEE-E--SSSEEEE-ECCTTCCEEEEEEEEECTTTSSCCCCCCCCCCEE
T ss_pred cCceEEEEEEEeCCCCcceEEE-E--eeeEEEe-ecCCCCEEEEEEEEeecCCCCCCCCcCCCCCCEE
Confidence 2346899999976533332222 2 3456655 499999999999999543 4567777765443
No 136
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.49 E-value=2.4e-11 Score=126.76 Aligned_cols=296 Identities=13% Similarity=0.098 Sum_probs=163.7
Q ss_pred CCCeEEecCCCCCCeEEEEEEEEeCCCCC----CCCCCCCceEee-cCCCCCcccccccccEEEecCCeEEEEEEEecc-
Q psy7040 380 DTPKGKVLDLIEGNQYEFRVLAVNKGGPG----EPSDPTAPHIAR-AKKVSPYINRDQLSDIKVRAGSNFEFDINVIGE- 453 (716)
Q Consensus 380 ~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~----~~s~~~~~~~~~-~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~- 453 (716)
...++.|.++++.+...|.|.+.|..|.. ...... ...+. ..+.+|.+..... ..+..|..+.|.|.+.+.
T Consensus 78 ~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~-~l~V~~~~~~~P~i~~~~~--~~~~~g~~v~L~C~~~g~~ 154 (475)
T 1iga_A 78 TTAYMGLSSLRPEDTAVYYCARDPYGGGKSEFDYWGQGT-LVTVSSASPTSPKVFPLSL--CSTQPDGNVVIACLVQGFF 154 (475)
T ss_pred CeEEEEECCCChhhCEEEEEEEeccCCCccceeeecCce-EEEeccCCCcCCeEEecCc--cccCCCCeEEEEEEEeeec
Confidence 34579999999999999999999976521 111111 12222 2233455442221 123689999999999887
Q ss_pred CC-C-eEEEEeCCeEeccCCcEEEE--eCCC---eEEEEECCCCCCCceeEEEEEEcCCCceeeEEEEE--E--------
Q psy7040 454 PI-P-TKEWLCNDITIISKDRFKIV--NDDK---STKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVT--V-------- 516 (716)
Q Consensus 454 p~-~-~~~W~~~~~~~~~~~~~~~~--~~~~---~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~--v-------- 516 (716)
|. + .+.|++++..........+. .++. ...|.|......|.|.|+|.|.|..+.. ....+. +
T Consensus 155 P~~p~~v~W~~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~-~~~~v~l~V~~~~~~~~ 233 (475)
T 1iga_A 155 PQEPLSVTWSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPS-QDVTVPCPVPSTPPTPS 233 (475)
T ss_pred CCCceEEEEcCCCcccceEeCCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCCc-eeeeEecccccCccccc
Confidence 55 4 99999887532110000000 1111 2357888888889999999999998742 222222 1
Q ss_pred -----------EEEEEEEeCCC----CCCCCceeeEEEEEEecCCCceeeeEEEccceeeeec-----c-c---cceeEE
Q psy7040 517 -----------LGCSLKWNPPE----DDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTID-----N-V---DYFTKI 572 (716)
Q Consensus 517 -----------~~v~l~W~~p~----~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~-----~-~---~~~~~~ 572 (716)
....+.-.+|. ..+......|.+.... ....+.+.| .......... . . .....+
T Consensus 234 ~~~~~~~~~~~~~p~v~~~~p~~~~~~~G~~v~L~C~~~g~~-p~~~~~i~W-~~~~~~~~~~~~~~~~~~g~~~~~~~L 311 (475)
T 1iga_A 234 PSTPPTPSPSCCHPRLSLHRPALEDLLLGSEANLTCTLTGLR-DASGVTFTW-TPSSGKSAVQGPPERDLCGCYSVSSVL 311 (475)
T ss_pred ccccccCCCCCCCcEEEEcCCChHHhccCCceEEEEEEEccc-CCCceEEEE-CCCCcCCccccCceECCCCCEEEEEEE
Confidence 01112122221 2222333444443211 100135889 3322111000 0 0 012468
Q ss_pred EEcCCCCCCeEEEEEEEEcCCCCCccceeeeccCCCCCCcccee-------e-ccceeEEEEEEeeEEEEeeeeccCcee
Q psy7040 573 TIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTDKPSAPEGPIQ-------W-LLTLTDVTWEISNYLQELHSSLMPISL 644 (716)
Q Consensus 573 ~i~~L~~~~~y~~~v~a~n~~G~~~~s~~~~v~~~p~~~~~~~~-------~-~~~~v~l~w~i~~y~v~~~~~~~~~~~ 644 (716)
.|.+++..+.+.|+|.|.|..|.......+.+......|. +.. + .+..+.|.+.+.|+.-. .-
T Consensus 312 ~I~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~P~-v~~~~~~~~~v~~g~~~~L~C~~~g~~P~--------~~ 382 (475)
T 1iga_A 312 PGCAEPWNHGKTFTCTAAYPESKTPLTATLSKSGNTFRPE-VHLLPPPSEELALNELVTLTCLARGFSPK--------DV 382 (475)
T ss_pred EEchHHhccCCcEEEEEEcCCCCCceEEEeecCCCCCCCe-EEEECCChHHhccCCceEEEEEEeeeECC--------CC
Confidence 8999999999999999999988754433332211122222 211 1 13335555544443100 00
Q ss_pred eEEEEeCCeEeeecc--------c----c----eeeEEEEccCCCCCcEEEEEEEEcCCCCc
Q psy7040 645 ESQYLMNDKRVTIDN--------V----D----YFTKITIRPLQRSDTAQYTVTATNSQGKD 690 (716)
Q Consensus 645 ~~~W~~~~~~~~~~~--------~----~----~~~~~~i~~l~~~~~y~y~~~a~n~~G~~ 690 (716)
.+.|+++|..+.... . + ....|.|......+.|.|+|.|.|.....
T Consensus 383 ~v~W~k~g~~l~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~~~g~YtC~a~n~~l~~ 444 (475)
T 1iga_A 383 LVRWLQGSQELPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEALPL 444 (475)
T ss_pred EEEEEECCEECCCCceeecccccccCCCCCcEEEEEEEEEChHHhcCCCEEEEEEEcCCCCC
Confidence 789999998875431 1 1 11456777777788999999999987653
No 137
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.49 E-value=4.6e-12 Score=114.81 Aligned_cols=176 Identities=19% Similarity=0.384 Sum_probs=125.4
Q ss_pred cccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEE
Q psy7040 433 LSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTA 512 (716)
Q Consensus 433 ~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~ 512 (716)
+..+.+..|+.+.|.|.+.+.|.+.+.|++++..+....++.+...+....|.|.++...|.|.|+|.|.|..|......
T Consensus 14 ~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~ 93 (197)
T 3lcy_A 14 MKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIATNEVGEVETSS 93 (197)
T ss_dssp CCCEEEETTSEEEEEEEEEEESCCEEEEEETTEEECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEEEECSSCEEEEEE
T ss_pred CCceEEeCCCcEEEEEEEecCCCCEEEEEECCEECCCCccEEEEeCCCEEEEEEecCCccCCEEEEEEEECCCCceeEEE
Confidence 45788999999999999999999999999999999888888888888888999999999999999999999887655544
Q ss_pred EEEEEEEEEEEeCCCCCCCCceeeEEEEEEecCCCceeeeEEEccceeeeeccccceeEEEEcCCCCCCeEEEEEEEEcC
Q psy7040 513 KVTVLGCSLKWNPPEDDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDNVDYFTKITIRPLQRSDTAQYTVTATNS 592 (716)
Q Consensus 513 ~~~v~~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~ 592 (716)
.+.+...... . +.. ... .... +..|..-.+.|.+..
T Consensus 94 ~l~v~~~p~~-~-~~~------------------------------~~~--------~~~~---~~~g~~~~l~C~~~~- 129 (197)
T 3lcy_A 94 KLLLQATPQF-H-PGY------------------------------PLK--------EKYY---GAVGSTLRLHVMYIG- 129 (197)
T ss_dssp EEEEEEEEEE-C-TTS------------------------------CCC--------SEEE---EETTSCEEEEEEEEE-
T ss_pred EEEEEcCCCC-C-CCc------------------------------cCC--------ccee---ecCCCeEEEEEEEee-
Confidence 4433310000 0 000 000 0000 112333444444421
Q ss_pred CCCCccceeeeccCCCCCCccceeeccceeEEEEEEeeEEEEeeeeccCceeeEEEEeCCeEeeecc------cceeeEE
Q psy7040 593 QGKDQVFIEVVVTDKPSAPEGPIQWLLTLTDVTWEISNYLQELHSSLMPISLESQYLMNDKRVTIDN------VDYFTKI 666 (716)
Q Consensus 593 ~G~~~~s~~~~v~~~p~~~~~~~~~~~~~v~l~w~i~~y~v~~~~~~~~~~~~~~W~~~~~~~~~~~------~~~~~~~ 666 (716)
. | +. .+.|++++..+.... ......|
T Consensus 130 --~------------p--~p--------------------------------~v~W~~~~~~~~~~~~~~~~~~~~~~~L 161 (197)
T 3lcy_A 130 --R------------P--VP--------------------------------AMTWFHGQKLLQNSENITIENTEHYTHL 161 (197)
T ss_dssp --E------------S--CC--------------------------------EEEEEETTEECCCCSSEEEEECSSEEEE
T ss_pred --e------------e--CC--------------------------------eeEEeECCEECCCCCceEEEEcCCEEEE
Confidence 0 0 00 567888888776541 1222689
Q ss_pred EEccCCC-CCcEEEEEEEEcCCCCceeeEEEEEec
Q psy7040 667 TIRPLQR-SDTAQYTVTATNSQGKDQVFIEVVVTD 700 (716)
Q Consensus 667 ~i~~l~~-~~~y~y~~~a~n~~G~~~~s~~l~v~~ 700 (716)
.|.++.. +|.|.|+|.|.|..|....+..|.|.+
T Consensus 162 ~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 196 (197)
T 3lcy_A 162 VMKNVQRKTHAGKYKVQLSNVFGTVDAILDVEIQD 196 (197)
T ss_dssp EESSCCHHHHCEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred EEccccchhhCceEEEEEEcCcCceEEEEEEEEec
Confidence 9999995 899999999999999999999998875
No 138
>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.49 E-value=9.4e-14 Score=110.96 Aligned_cols=95 Identities=40% Similarity=0.622 Sum_probs=81.5
Q ss_pred CCCCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCCcEEEecc--cCCCeEEecCCCCCcEEEEEEEEEe
Q psy7040 54 GLDPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETGVWIPVGK--TREPEMDVTGLTPGHEYKFRVKALN 131 (716)
Q Consensus 54 ~~~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~--~~~~~~~i~~L~~~~~y~~~v~a~~ 131 (716)
++.|+..+++.+++.+++.|+|++|..++|.+|.+|.|+++..+.+.|..+.. ...+.+++.+|.+++.|.|||+|.|
T Consensus 10 ~p~~P~~P~v~~v~~~sv~L~W~~P~~~gg~~i~~Y~Ve~~~~~~~~w~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~N 89 (112)
T 1bpv_A 10 PIDPPGKPVPLNITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANFSNILENEFTVSGLTEDAAYEFRVIAKN 89 (112)
T ss_dssp CCCCCCCCEEEEEETTEEEEECCCCSCCTTCCCSCCEEEEEETTSCCCEECCCSCCCSSEEEECSCCSSCCEEEEEEEEC
T ss_pred CCCCCCCCEEEEeeCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEeecccCccCEEEECCCCCCCEEEEEEEEEE
Confidence 45667778899999999999999988788888999999999888888988753 3358999999999999999999999
Q ss_pred cCcc-CCCccccceEEec
Q psy7040 132 KEGE-SEPLETFSSIIAR 148 (716)
Q Consensus 132 ~~g~-~~~s~~~~~~~~~ 148 (716)
..|. |.+|.....++..
T Consensus 90 ~~G~~s~~S~~~~~~t~~ 107 (112)
T 1bpv_A 90 AAGAISPPSEPSDAITCR 107 (112)
T ss_dssp TTSCEEEEEEEEEEECSC
T ss_pred CCCCCCCCCCCCCCEEeC
Confidence 9996 9988777666554
No 139
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.49 E-value=9.5e-14 Score=143.83 Aligned_cols=326 Identities=12% Similarity=0.033 Sum_probs=176.2
Q ss_pred ceEEEEecCCccEEEEeccccCcceEEEEEEEeCCCCc-eeEEEEEEecCCCCCCCCeEEeE-----EeCCeEEEEEECC
Q psy7040 174 MVRKVQHLDYNTKLGVRMAQRADAGFYTVTAENINGKD-SVEVEVIVLDKPSPPGGPLKVSN-----VHAEGVTLDWKVP 247 (716)
Q Consensus 174 ~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~-~~~~~~~v~~~p~~p~~~~~~~~-----~~~~~~~l~W~~p 247 (716)
.|+.+...+....|.|.+++..|+|.|+|.|.|..|.. ...+.+.|.....+|. +.+.. ..+..+.|.|...
T Consensus 64 ~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~--v~~~~~~~~~~~g~~~~l~C~~~ 141 (438)
T 1qgc_4 64 DRFSGSGSRTDFTLTIDPVEADDVATYYCQQSNEVPLTFGAGTKLDLKRADAAPT--VSIFPPSSEQLTSGGASVVCFLN 141 (438)
T ss_dssp TTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSTTCCBCCCEEEEECCCCBCCE--EEEECCCHHHHHTTEEEEEEEEE
T ss_pred CcEEEEccCCcEEEEeCCCcCcCCeeEEEEEecCCCccccCceeEEecCCCCCCE--EEecCCChhhccCCceEEEEEEc
Confidence 45555555667899999999999999999999998753 4556777755443443 33321 2356889999852
Q ss_pred CCCCCCccceEEEEEEeCC----CC-Ce-EEcc-ccCc---ccceEEEcCCCCCCeEEEEEEEEcCCCCCCCCcccceEE
Q psy7040 248 DDDGGQPIEKYVVDKMDEA----TG-RW-TPAG-ETEG---PVTGLEVEGLIPNHKYKFRVRAVNKQGKSEPLTTTASIE 317 (716)
Q Consensus 248 ~~~~~~~~~~y~v~~~~~~----~~-~~-~~~~-~~~~---~~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~~~~~~~~~ 317 (716)
.. .|.. ..+.|...+ .. .. .... ...+ ....+.|.++...+.+.|.|.|.|..|... .. ..
T Consensus 142 g~---~p~~-~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~---~~--~~ 212 (438)
T 1qgc_4 142 NF---YPKD-INVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSP---IV--KS 212 (438)
T ss_dssp EE---BSSC-EEEEEEETTEEECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSC---EE--EE
T ss_pred cc---cCCC-cEEEEEECCEEcCCCceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCCc---ee--cc
Confidence 21 1111 122222211 01 00 0000 0011 124688889988899999999999776531 11 11
Q ss_pred ecCCCCCC--CCCCCcEEEeeeCCeEEEEecCCCCCC-CccceEEEE----------EEee---------cCCCceEEEe
Q psy7040 318 AKNPFNQP--GKPGTPEIKDFDTDFVELAWTPPEQNG-GSPIVGYII----------EKKE---------KYSPIWEKCA 375 (716)
Q Consensus 318 ~~~~~~~p--~~p~~~~~~~~~~~~i~l~W~~p~~~~-~~~i~~y~v----------~~~~---------~~~~~~~~~~ 375 (716)
+......+ ..|... ....+..+.|.|.....+. ...+..|+- .... ..........
T Consensus 213 ~~~~~~~~~~~~~~~~--~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 290 (438)
T 1qgc_4 213 FNRNECEVMLVESGGG--LVKPGGSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISR 290 (438)
T ss_dssp EETTC-CCEEEEECCE--EECTTCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEE
T ss_pred cccccceeEEecCCce--EEecCCcEEEEEEEcccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEe
Confidence 11000000 011111 2234556777776522110 111222221 0000 0001111111
Q ss_pred eecCCCCeEEecCCCCCCeEEEEEEEEeCCCCC---CCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEec
Q psy7040 376 QTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPG---EPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIG 452 (716)
Q Consensus 376 ~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~---~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~ 452 (716)
........+.|.++...+...|.|.|.|..|.. ................+|.+....+ ...+..|+.+.|.|.+.+
T Consensus 291 ~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~-~~~~~~g~~v~L~C~~~g 369 (438)
T 1qgc_4 291 DNAKNTLYLQMSSLRSADTAMYYCVRREDGGDEGFAYWGQGTVVTVSAAKTTPPSVYPLAP-GSAAAAASMVTLGCLVKG 369 (438)
T ss_dssp ETTTTEEEEEECSCCGGGCCEEEEEECCSSSCCCCCSBCCCEEEEECSSCCBCCEEEEECC-CGGGCCSSEEEEEEEEES
T ss_pred ecCCCeEEEEECCCChhhCEEEEEEEEccCCCccceeeCCCEEEEEecCCCCCCeEEEcCc-ccccccCCcEEEEEEecc
Confidence 111223478999999999999999999855421 1111111111112223454432211 122457999999999998
Q ss_pred c-CCC-eEEEEeCCeEeccCCcEEEEeCCC---eEEEEECCCCCCCceeEEEEEEcCCCceeeEEEE
Q psy7040 453 E-PIP-TKEWLCNDITIISKDRFKIVNDDK---STKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKV 514 (716)
Q Consensus 453 ~-p~~-~~~W~~~~~~~~~~~~~~~~~~~~---~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~ 514 (716)
. |.+ .+.|++++..+.......+...+. ...|.|.+....+ |.|+|.|.|..|.......+
T Consensus 370 ~~P~~~~v~W~~~g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~g~~~~~~~i 435 (438)
T 1qgc_4 370 YFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKI 435 (438)
T ss_dssp CBSSCCEEEEGGGTCCSSEEECCCEEETTEEEEEEEEEEEEEHHHH-SCCEEEEEEGGGTEEEEEEC
T ss_pred ccCCCcEEEEecCCCCCceeecCccccCCcEEEEEEEEEehhhcCC-ceEEEEEEeCCCCcceeeec
Confidence 7 877 999999987754211111111111 2258888888778 99999999999987655443
No 140
>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.47 E-value=2.6e-13 Score=108.92 Aligned_cols=97 Identities=23% Similarity=0.323 Sum_probs=81.9
Q ss_pred CCCCCCCceEEEEeCCeEEEEecCCCCCC---CCc-cceEEEEEEcCCCCcEEEecccCCCeEEecCCCCCcEEEEEEEE
Q psy7040 54 GLDPEGPLEVSNIHKDGCTLKWNKPKDDG---GEP-LEGYLVEKYDPETGVWIPVGKTREPEMDVTGLTPGHEYKFRVKA 129 (716)
Q Consensus 54 ~~~p~~~l~~~~~~~~s~~l~W~~p~~~~---~~~-i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a 129 (716)
+..+|.++.+.+++.+++.|+|++|.+++ +.+ |.+|.|+..+.....|..+.....+.++|.+|.|++.|.|||+|
T Consensus 15 pp~~P~~p~v~~vt~~Sv~LsW~~p~~~g~~~g~~~I~~Y~ve~~~~~~~~~~~v~~~~~t~~~v~gL~p~t~Y~frV~A 94 (120)
T 1wfu_A 15 PLSKPHPPVVGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIEEEDPKMHSYGVIYTGYATRHVVEGLEPRTLYKFRLKV 94 (120)
T ss_dssp CCCCCCCCBCCCEETTEEEEECTTTSCSCCCSCGGGCCEEEEEEECTTTCCEEEEEEESCSEEEEESCCTTCEEEEEEEE
T ss_pred CCCCCCCceeceEECCEEEEEECCCccCCccCCCCceEEEEEEEecCCCCceEEEecCCccEEEECCCCCCCEEEEEEEE
Confidence 44556667788999999999999998766 666 99999996655678898887776789999999999999999999
Q ss_pred EecCccCCCccccceEEecCC
Q psy7040 130 LNKEGESEPLETFSSIIARDP 150 (716)
Q Consensus 130 ~~~~g~~~~s~~~~~~~~~~p 150 (716)
.|..|.+.++......+..+|
T Consensus 95 ~n~~G~s~~S~~~~~~T~~~p 115 (120)
T 1wfu_A 95 TSPSGEYEYSPVVSVATTRES 115 (120)
T ss_dssp ECSSSCEEECCCEEEECCCCC
T ss_pred ECCCCCCCCCccEeeEcCCCC
Confidence 999999999988777766554
No 141
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.47 E-value=1.1e-12 Score=128.85 Aligned_cols=248 Identities=14% Similarity=0.129 Sum_probs=149.3
Q ss_pred CceEEEEecCCccEEEEeccccCcceEEEEEEEeCCCCceeEEEEEEec------------CCCCCCCCe-EEeEEeCCe
Q psy7040 173 GMVRKVQHLDYNTKLGVRMAQRADAGFYTVTAENINGKDSVEVEVIVLD------------KPSPPGGPL-KVSNVHAEG 239 (716)
Q Consensus 173 ~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~~~v~~------------~p~~p~~~~-~~~~~~~~~ 239 (716)
..++.+...+....|.|.++...|+|.|+|.|.|..|... +..+.+.. +|..+..+. ......+..
T Consensus 46 ~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~-s~~l~v~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~ 124 (312)
T 2y23_A 46 SPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIAS-SYLIDEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQ 124 (312)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCCE-EEEECHHHHHHHHHHHHHHHSCBCCEEEEEEEEECSSSC
T ss_pred CCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcEE-EEEEEEeeeeeeecccccCCCCccccccCCceEEeeCCC
Confidence 4566677667778999999999999999999999998654 55565543 443332211 344556788
Q ss_pred EEEEEECCCCCCCCccceEEEEEE---eCCCCCeEEccccCcccceEEEcCCCCCCeEEEEEEEEcCCCCCCCCcccceE
Q psy7040 240 VTLDWKVPDDDGGQPIEKYVVDKM---DEATGRWTPAGETEGPVTGLEVEGLIPNHKYKFRVRAVNKQGKSEPLTTTASI 316 (716)
Q Consensus 240 ~~l~W~~p~~~~~~~~~~y~v~~~---~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~~~~~~~~ 316 (716)
+.|.|.... +.+...+.+... ......+............+.|.++...+.+.|+|.|.+..+.. . .
T Consensus 125 v~l~C~~~~---~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~----~---~ 194 (312)
T 2y23_A 125 VRFWMQAEK---LSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKATN----H---S 194 (312)
T ss_dssp EEEEEEESC---CCSSCEEEEEETTEEECSSSSCEEEEETTTTEEEEEESCCCGGGCEEEEEEEESSSCEE----E---E
T ss_pred EEEEEEEEe---CCCCCEEEEEECCEECeeCCcEEEEEccCCCEEEEEEccCCcccCEeEEEEEEeCCceE----E---E
Confidence 999999641 112222222221 01111222111111234559999999999999999996532110 0 0
Q ss_pred EecCCCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEE
Q psy7040 317 EAKNPFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYE 396 (716)
Q Consensus 317 ~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~ 396 (716)
.+.... .. |. ...... .+... +
T Consensus 195 -------------------------~~~~~~-------~~--~~------------~~~~~~----~~~~~---~----- 216 (312)
T 2y23_A 195 -------------------------TVVLVG-------DV--FK------------KLQKEA----EFQRQ---E----- 216 (312)
T ss_dssp -------------------------EEEECT-------HH--HH------------HHHHHH----HHHHH---H-----
T ss_pred -------------------------EEEEcc-------hh--hh------------hhcccc----ccccc---c-----
Confidence 000000 00 00 000000 00000 0
Q ss_pred EEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccCCC-eEEEEeCCeEeccCCcEEE
Q psy7040 397 FRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIP-TKEWLCNDITIISKDRFKI 475 (716)
Q Consensus 397 ~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~-~~~W~~~~~~~~~~~~~~~ 475 (716)
. ....+|.+.. .....+..|..+.|.|.+.+.|.+ .+.|++++..+....++.+
T Consensus 217 --------------------~---~~~~~p~~~~--~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~g~~~~~~~~~~~ 271 (312)
T 2y23_A 217 --------------------W---IRKQGPHFVE--YLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDF 271 (312)
T ss_dssp --------------------H---HHHHSSEEEE--EEEEEEETTTEEEEEEEEESCCSSCEEEEEETTEEEEEECCC--
T ss_pred --------------------h---hhccCCceee--cceEEEeCCCEEEEEEEEcCCCCCCEEEEeeCCEECCCCCcEEE
Confidence 0 0000222211 112567899999999999999988 9999999999876665554
Q ss_pred EeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEEEEEE
Q psy7040 476 VNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTV 516 (716)
Q Consensus 476 ~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v 516 (716)
. +....|.|.++...|.|.|+|.|.|..|....++.+.+
T Consensus 272 ~--~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~i 310 (312)
T 2y23_A 272 K--DGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVD 310 (312)
T ss_dssp ----CEEEEEECSCSGGGCEEEEEEEESTTCCEEEEEEECS
T ss_pred E--CCEEEEEECcCCHHHCEEEEEEEEcCCCceeeeeEEEe
Confidence 4 44679999999999999999999999999888777653
No 142
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.47 E-value=3.1e-12 Score=115.64 Aligned_cols=175 Identities=21% Similarity=0.329 Sum_probs=119.9
Q ss_pred cccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCC--cEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceee
Q psy7040 433 LSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKD--RFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKG 510 (716)
Q Consensus 433 ~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~--~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~ 510 (716)
+..+.+..|+.+.|.|.+.+.|.+.+.|++++..+.... .+.+...+....|.|.++...|.|.|+|.|.|..|....
T Consensus 12 ~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~ 91 (194)
T 2a38_A 12 LQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKATNGSGQATS 91 (194)
T ss_dssp CCCEEEETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEE
T ss_pred CCceEEECCCEEEEEEEEEecCCCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEEEEcCCceEeE
Confidence 456789999999999999999999999999998876543 566666677889999999999999999999998876554
Q ss_pred EEEEEEEEEEEEEeCCCCCCCCceeeEEEEEEecCCCceeeeEEEccceeeeeccccceeEEEEcCCCCCCeEEEEEEEE
Q psy7040 511 TAKVTVLGCSLKWNPPEDDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDNVDYFTKITIRPLQRSDTAQYTVTAT 590 (716)
Q Consensus 511 s~~~~v~~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~ 590 (716)
+..+.+. ... +.... .... ... .+..|....+.|.+.
T Consensus 92 ~~~l~v~-------~~~---------~~p~~------------~~~~------------~~~---~~~~g~~~~l~C~~~ 128 (194)
T 2a38_A 92 TAELLVK-------AET---------APPNF------------VQRL------------QSM---TVRQGSQVRLQVRVT 128 (194)
T ss_dssp EEEEEEE-------CCC---------EEEEE------------EECC------------CCE---EECTTEEEEEEEEEE
T ss_pred EEEEEEc-------cCC---------CCCEE------------EeCC------------ccE---EEcCCCEEEEEEEEE
Confidence 4433332 000 00000 0000 000 022333344444432
Q ss_pred cCCCCCccceeeeccCCCCCCccceeeccceeEEEEEEeeEEEEeeeeccCceeeEEEEeCCeEeeecc------cceee
Q psy7040 591 NSQGKDQVFIEVVVTDKPSAPEGPIQWLLTLTDVTWEISNYLQELHSSLMPISLESQYLMNDKRVTIDN------VDYFT 664 (716)
Q Consensus 591 n~~G~~~~s~~~~v~~~p~~~~~~~~~~~~~v~l~w~i~~y~v~~~~~~~~~~~~~~W~~~~~~~~~~~------~~~~~ 664 (716)
. . | +. .+.|+++|..+.... .+...
T Consensus 129 g---~------------p--~~--------------------------------~v~W~~~~~~~~~~~~~~~~~~~~~~ 159 (194)
T 2a38_A 129 G---I------------P--TP--------------------------------VVKFYRDGAEIQSSLDFQISQEGDLY 159 (194)
T ss_dssp E---E------------S--CC--------------------------------EEEEEETTEECCCSSSEEEEEETTEE
T ss_pred E---e------------c--CC--------------------------------eEEEEECCEECCCCCcEEEEEcCCEE
Confidence 1 0 0 00 567888888776541 11224
Q ss_pred EEEEccCCCCCcEEEEEEEEcCCCCceeeEEEEEe
Q psy7040 665 KITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVT 699 (716)
Q Consensus 665 ~~~i~~l~~~~~y~y~~~a~n~~G~~~~s~~l~v~ 699 (716)
.|.|.++...|.|.|+|.|.|..|....+..|.|+
T Consensus 160 ~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 194 (194)
T 2a38_A 160 SLLIAEAYPEDSGTYSVNATNSVGRATSTAELLVQ 194 (194)
T ss_dssp EEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred EEEECCCChhcCeEEEEEEEeCCCceEEEEEEEEC
Confidence 79999999999999999999999998888888774
No 143
>3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens}
Probab=99.46 E-value=2.8e-12 Score=115.42 Aligned_cols=176 Identities=17% Similarity=0.191 Sum_probs=121.1
Q ss_pred CCCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCCcEEE-ecccCCCeEEecCCCCCcEEEEEEEEEecC
Q psy7040 55 LDPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETGVWIP-VGKTREPEMDVTGLTPGHEYKFRVKALNKE 133 (716)
Q Consensus 55 ~~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~-~~~~~~~~~~i~~L~~~~~y~~~v~a~~~~ 133 (716)
+++|.++.+..... ...|+|++|...++ .+ .|.|+|+.. +.|.. |.....+.+.|.+|.++..|.+||+|.++.
T Consensus 2 lp~P~nv~~~s~n~-~~iL~W~pp~~~~~-~v-~Y~V~y~~~--~~w~~~c~~~~~~~c~lt~l~~~~~Y~~rV~A~~~~ 76 (201)
T 3lqm_A 2 VPPPENVRMNSVNF-KNILQWESPAFAKG-QL-TFTAQYLSY--RIFQDKCMQTTLTECDFSSLSKYGDHTLRVRAEFAD 76 (201)
T ss_dssp CCCCEEEEEEEETT-EEEEEEECCCCSSS-CC-EEEEEEEET--TEEEEEEEEESSSEEECTTSCSSSCEEEEEEEEETT
T ss_pred CCCCcccEEEEECC-ceEEEECCCCCCCC-Ce-EEEEEEEEC--CCcccCcCccCCCEEECCCCccCCCEEEEEEEecCC
Confidence 45666676666554 46799999875444 35 499999876 46764 334456899999999999999999999988
Q ss_pred ccCCCccccceEEecCCCCcccccccccceecccCCCCCCceEEEEecCCccEEEEeccccCcceEEEEEEEeCCCCcee
Q psy7040 134 GESEPLETFSSIIARDPYSKYTSVSSLDSHKRSNQPCGSGMVRKVQHLDYNTKLGVRMAQRADAGFYTVTAENINGKDSV 213 (716)
Q Consensus 134 g~~~~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~G~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~ 213 (716)
|.|.++.. .....
T Consensus 77 ~~S~~s~~--~f~~~----------------------------------------------------------------- 89 (201)
T 3lqm_A 77 EHSDWVQI--TFSPV----------------------------------------------------------------- 89 (201)
T ss_dssp EECCCEEE--EECHH-----------------------------------------------------------------
T ss_pred CcCcceee--eeeec-----------------------------------------------------------------
Confidence 87776531 11000
Q ss_pred EEEEEEecCCCCCCCCeEEeEEeCCeEEEEEECCCCCC-CC--------ccceEEEEEEeCCCCCeEEccccCcccceEE
Q psy7040 214 EVEVIVLDKPSPPGGPLKVSNVHAEGVTLDWKVPDDDG-GQ--------PIEKYVVDKMDEATGRWTPAGETEGPVTGLE 284 (716)
Q Consensus 214 ~~~~~v~~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~-~~--------~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~ 284 (716)
..+.+.+| . +.+ ....+++.|.|.+|...+ +. .+..|.|.+...+........ .....+.
T Consensus 90 -----~~t~~~PP-~-v~~-~~~~~si~v~w~~P~~~~~~~~~~~~~~~~~l~Y~v~y~~~~~~~~~~~~---~~~~~~~ 158 (201)
T 3lqm_A 90 -----DDTIIGPP-G-MQV-EVLADCLHMRFLAPKIENEYETWTMKNVYNSWTYNVQYWKQGTDEKFQIT---PQYDFEV 158 (201)
T ss_dssp -----HHSBCCCC-E-EEE-EEETTEEEEEEECCEEECSSCEEEHHHHCTTCEEEEEEEETTCCCCEEEC---CSSSEEE
T ss_pred -----ccCeeCCC-E-EEE-EEeCCEEEEEEcCCCccCCCcccCHHHhCCceEEEEEEEECCCCcEEEEE---ecCceEE
Confidence 01234555 3 666 456789999999886433 32 367999987665443322222 3457899
Q ss_pred EcCCCCCCeEEEEEEEEcC--CCCCCCCccc
Q psy7040 285 VEGLIPNHKYKFRVRAVNK--QGKSEPLTTT 313 (716)
Q Consensus 285 i~~L~p~~~y~~~v~a~n~--~g~~~~~~~~ 313 (716)
|.+|.|++.|.|+|+|.+. .|.+..+...
T Consensus 159 l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~ 189 (201)
T 3lqm_A 159 LRNLEPWTTYCVQVRGFLPDRNKAGEWSEPV 189 (201)
T ss_dssp ECSCCTTCEEEEEEEEEETTTTEECCCCCCE
T ss_pred EecCCCCCcEEEEEEEEeccCCCCCCcCCCE
Confidence 9999999999999999985 4555555543
No 144
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.44 E-value=1.4e-11 Score=113.04 Aligned_cols=193 Identities=19% Similarity=0.289 Sum_probs=124.4
Q ss_pred CCcccccccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEec-cCCcEEEEe-CCCeEEEEECCCCC-CCceeEEEEE
Q psy7040 425 SPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITII-SKDRFKIVN-DDKSTKLKVFDSKR-GDSGIYTLAV 501 (716)
Q Consensus 425 ~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~-~~~~~~~~~-~~~~~~l~i~~l~~-~~~~~y~~~a 501 (716)
+|.+.. .+..+.+..|+.+.|.|.+.+.|.+.+.|++++..+. ...++.+.. .+....|.|.++.. .|.|.|+|.|
T Consensus 6 pP~~~~-~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~~ 84 (212)
T 2yd1_A 6 PPEIIR-KPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECVA 84 (212)
T ss_dssp CCEEEE-CCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEEE
T ss_pred CCEEEc-CCCceEEecCCEEEEEEEEccCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEEEE
Confidence 555443 3456789999999999999999999999999999886 455565544 34457999999999 9999999999
Q ss_pred EcCCCc-eeeEEEEEEEEEEEEEeCCCCCCCCceeeEEEEEEecCCCceeeeEEEccceeeeeccccceeEEEEcCCCCC
Q psy7040 502 KNSWGT-DKGTAKVTVLGCSLKWNPPEDDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDNVDYFTKITIRPLQRS 580 (716)
Q Consensus 502 ~n~~g~-~~~s~~~~v~~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~i~~L~~~ 580 (716)
.|..|. .+....+.+. ..+......+. +. ... ... .+..|
T Consensus 85 ~n~~g~~~~~~~~l~V~------~~~~~~~~~p~--~~----------------~~~------------~~~---~~~~g 125 (212)
T 2yd1_A 85 ENGVGDAVSADATLTIY------EGDKTPAGFPV--IT----------------QGP------------GTR---VIEVG 125 (212)
T ss_dssp ECSSSCEEEEEEEEEEE------CTTCSCTTCCE--EE----------------ECC------------CCE---EEETT
T ss_pred EeCCCCeEEeeEEEEEe------cccCCCCCCCe--eE----------------eCC------------Cce---EeecC
Confidence 998886 4444443333 11100000000 00 000 000 01123
Q ss_pred CeEEEEEEEEcCCCCCccceeeeccCCCCCCccceeeccceeEEEEEEeeEEEEeeeeccCceeeEEEEeCCeEeeeccc
Q psy7040 581 DTAQYTVTATNSQGKDQVFIEVVVTDKPSAPEGPIQWLLTLTDVTWEISNYLQELHSSLMPISLESQYLMNDKRVTIDNV 660 (716)
Q Consensus 581 ~~y~~~v~a~n~~G~~~~s~~~~v~~~p~~~~~~~~~~~~~v~l~w~i~~y~v~~~~~~~~~~~~~~W~~~~~~~~~~~~ 660 (716)
....+.|.+.. . | +. .+.|++++..+.....
T Consensus 126 ~~v~l~C~~~g---~------------p--~p--------------------------------~i~W~~~~~~~~~~~~ 156 (212)
T 2yd1_A 126 HTVLMTCKAIG---N------------P--TP--------------------------------NIYWIKNQTKVDMSNP 156 (212)
T ss_dssp CCEEECCEEEC---S------------S--CC--------------------------------EEEEEETTEECCTTST
T ss_pred CeEEEEEEecc---C------------C--CC--------------------------------eEEEEECCeEcccCCC
Confidence 33344444321 0 0 00 5789999988765311
Q ss_pred ---ceeeEEEEccCCCCCcEEEEEEEEcCCCCceee-EEEEEecCCCCCC
Q psy7040 661 ---DYFTKITIRPLQRSDTAQYTVTATNSQGKDQVF-IEVVVTDKPSAPE 706 (716)
Q Consensus 661 ---~~~~~~~i~~l~~~~~y~y~~~a~n~~G~~~~s-~~l~v~~~p~~p~ 706 (716)
.....|.|.++...|.|.|+|.|.|..|..... +.|.|...+..|.
T Consensus 157 ~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V~~~~~~~~ 206 (212)
T 2yd1_A 157 RYSLKDGFLQIENSREEDQGKYECVAENSMGTEHSKATNLYVKVRRVGTK 206 (212)
T ss_dssp TEEEETTEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC---C--
T ss_pred eEEccCCeEEEccCChhhCEEEEEEeecCCCceeEEEEEEEEEecccccc
Confidence 122589999999999999999999999998765 8999998877664
No 145
>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.44 E-value=1.1e-12 Score=105.58 Aligned_cols=99 Identities=26% Similarity=0.400 Sum_probs=85.5
Q ss_pred CCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEE
Q psy7040 321 PFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVL 400 (716)
Q Consensus 321 ~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~ 400 (716)
+..+|.+|.++++...+.+++.|+|.+|..+++.+|.+|.|+++..+...|...........++++.+|.+++.|.|+|+
T Consensus 5 p~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~v~~L~p~t~Y~frV~ 84 (111)
T 1x5y_A 5 SSGPTSAPQHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANKEPVERCGFTVKDLPTGARILFRVV 84 (111)
T ss_dssp CCSCCCCCEEEEEEEECSSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEESSSSCBSSSEEEEECCCTTCCEEEEEE
T ss_pred CCCCCcCCCCCEEEeccCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEccccCCcccEEEECCCCCCCEEEEEEE
Confidence 44778999999999999999999999988777777999999999887778887665556788999999999999999999
Q ss_pred EEeCCCCCCCCCCCCceEe
Q psy7040 401 AVNKGGPGEPSDPTAPHIA 419 (716)
Q Consensus 401 a~n~~g~~~~s~~~~~~~~ 419 (716)
|.|..|.|.++.....++.
T Consensus 85 A~n~~G~s~~S~~~~~v~~ 103 (111)
T 1x5y_A 85 GVNIAGRSEPATLLQPVTI 103 (111)
T ss_dssp EEETTEECCCCCCSSCBCC
T ss_pred EEcCCcCCCCccCCCCEEe
Confidence 9999999999887655544
No 146
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.43 E-value=7.4e-13 Score=130.45 Aligned_cols=138 Identities=18% Similarity=0.291 Sum_probs=105.5
Q ss_pred CCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceE--------------eecCCCCCcccccccccEEEecCCeEE
Q psy7040 380 DTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHI--------------ARAKKVSPYINRDQLSDIKVRAGSNFE 445 (716)
Q Consensus 380 ~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~--------------~~~~~~~P~~~~~~~~~~~~~~g~~~~ 445 (716)
....+.|.++...+.+.|+|.|.|..|....+....... .......|.+....+....+..|..+.
T Consensus 162 ~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~ 241 (317)
T 2y25_A 162 EQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALN 241 (317)
T ss_dssp SEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHHHHTTTSCEEEEBCCSEEEEETTSBBC
T ss_pred CEEEEEECcCCcccCeeEEEEEEeCCceEEEEEEEeeeeccccchhhcccCCcccCcCCCCcccccCCccEEEEcCCEEE
Confidence 334588999999999999999999777543221110000 001112344444445567899999999
Q ss_pred EEEEEeccCCCeEEEEeCCeEeccCCcEEEEeC-CCeEEEEECCCCCCCceeEEEEEEcCCCceeeEEEEEEE
Q psy7040 446 FDINVIGEPIPTKEWLCNDITIISKDRFKIVND-DKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVL 517 (716)
Q Consensus 446 ~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~-~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v~ 517 (716)
|.|.+.+.|.+.+.|++++..+....++.+... +....|.|.++...|.|.|+|.|.|..|....+..+.|.
T Consensus 242 l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 314 (317)
T 2y25_A 242 LTCNVWGDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVF 314 (317)
T ss_dssp EEEEEECSSCCEEEEEESSSEECCCSSEEECCBTTTEEEEEEBSCCSTTCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEecCCCCEEEEEECCEeCCCCCcEEEEEcCCCEEEEEECCCCHHHCEEEEEEEEeCCCeEEEEEEEEEE
Confidence 999999999999999999999988888877666 667799999999999999999999999998887777664
No 147
>1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A
Probab=99.43 E-value=1.5e-12 Score=120.49 Aligned_cols=182 Identities=16% Similarity=0.218 Sum_probs=119.3
Q ss_pred cCCCCCCCCeEEeEEeCCeEEEEEECCCCCCCCc-cceEEEEEEeCCC----CCeEEcccc---CcccceEEEcCCCCCC
Q psy7040 221 DKPSPPGGPLKVSNVHAEGVTLDWKVPDDDGGQP-IEKYVVDKMDEAT----GRWTPAGET---EGPVTGLEVEGLIPNH 292 (716)
Q Consensus 221 ~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~-~~~y~v~~~~~~~----~~~~~~~~~---~~~~~~~~i~~L~p~~ 292 (716)
.+|..|.+ +.+.......++++|++ ..+++.+ ...|.+.|..... ..+..|... ....+.+...+|.+++
T Consensus 28 ~pP~~P~~-l~C~~~~~~~~~c~W~p-~~~~~~~~~~~y~l~Y~~~~~~~~~~~~~~C~~~~~~~~~~C~~~~~~l~~~~ 105 (236)
T 1axi_B 28 NSSGEPKF-TKCRSPERETFSCHWTD-EVHHGTKNEGPIQLFYTRRNTQEWTQEWKECPDYVSAGENSCYFNSSFTSIAI 105 (236)
T ss_dssp ----CCCE-EEEEBSSSSCEEEEECC-C--------CSCEEEEEECC------CCEECSCSSTTCTTEEEECGGGCCSSS
T ss_pred CCCCCCcC-CeEEeCCCCEEEEEecC-CCCCCCCCCceEEEEEEeCCCCcCCCceeeCCCCCCCCCEEEEECCcCCcccc
Confidence 47888887 76776778899999995 4434433 2578888765433 246666532 1234567777899999
Q ss_pred eEEEEEEEEcCCCCCCCCcccceEEecCCCCCCCCCCCcEEE--eeeC----CeEEEEecCCCCC---CCccceEEEEEE
Q psy7040 293 KYKFRVRAVNKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIK--DFDT----DFVELAWTPPEQN---GGSPIVGYIIEK 363 (716)
Q Consensus 293 ~y~~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~--~~~~----~~i~l~W~~p~~~---~~~~i~~y~v~~ 363 (716)
.|.|+|.| | .+.+. .. .+.. .....|.+|.++.+. ..+. ..+.|+|.+|... +|..+..|+|+|
T Consensus 106 ~Y~~~V~a-N-~~~s~---~~-~~~~-~~~v~p~pP~~l~~~~~~~s~~~~~~~l~lsW~~P~~~~~~~g~~~l~Yevry 178 (236)
T 1axi_B 106 PYCIKLTS-N-GGTVD---EK-CFSV-DEIVQPDPPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQY 178 (236)
T ss_dssp EEEEEEEE-T-TEEEE---EE-EEEG-GGGBCCCCCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEE
T ss_pred eEEEEEEE-C-CccCC---Ce-Eeec-ccccccCCCcccEEEEEecccCCCCceEEEEECCCCCccccCCceeeEEEEEE
Confidence 99999999 8 33222 11 1212 223568889888543 3322 3499999997642 232578999999
Q ss_pred eecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEEeCCC--CCCCCCC
Q psy7040 364 KEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGG--PGEPSDP 413 (716)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g--~~~~s~~ 413 (716)
+..+...|..... ....++.|.+|.+++.|.|+|+|.+..| .|++|..
T Consensus 179 ~~~~~~~w~~~~~--~~~~~~~l~~L~p~t~Y~vqVRa~~~~gg~ws~WS~~ 228 (236)
T 1axi_B 179 KEVNETKWKMMDP--ILTTSVPVYSLKVDKEYEVRVRSKQRNSGNYGEFSEV 228 (236)
T ss_dssp EETTCSSCEECCC--BSSSEEEEEEEETTSCEEEEEEEEETTSSCCCCCCCC
T ss_pred EECCCCceEEEec--cCCCEEEEeccCCCCEEEEEEEEEECCCCCcCCCCCC
Confidence 9887777876432 3468899999999999999999999887 5555544
No 148
>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.43 E-value=2.6e-12 Score=105.16 Aligned_cols=111 Identities=26% Similarity=0.467 Sum_probs=88.0
Q ss_pred CCCCCCcccceEEecCCCCCCCCCCCcEEE-eeeCCeEEEEecCCCCCCCccceEEEEEEeecCC-CceEEEeeecCCCC
Q psy7040 305 GKSEPLTTTASIEAKNPFNQPGKPGTPEIK-DFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYS-PIWEKCAQTEGDTP 382 (716)
Q Consensus 305 g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~-~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~-~~~~~~~~~~~~~~ 382 (716)
|.+.++.... +.+....|.+|.++.+. ..+.+++.|+|.+|..+++.+|.+|.|+++.... ..|..... ....
T Consensus 1 G~s~~S~~~~---~~t~~~~P~~P~~~~~~~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~~~~~~~~--~~~~ 75 (120)
T 2crm_A 1 GSSGSSGVVE---FTTCPDKPGIPVKPSVKGKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMIYS--GATR 75 (120)
T ss_dssp CCCTTCSCCS---CCSCCCCCCCCCCCEEEEEEETTEEEEECCCCTTCCSSCCCEEEEEEEESSSSCCCEEEEC--SSCS
T ss_pred CCCCCcCCEE---EEeCCCCCCCCCCCEEeeccCCCEEEEEECCCCcCCCCeeeEEEEEEccCCCCcCCEEEEe--cccc
Confidence 3444555442 33455778899998887 7889999999999887767789999999998765 47876643 4578
Q ss_pred eEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEee
Q psy7040 383 KGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIAR 420 (716)
Q Consensus 383 ~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~ 420 (716)
++.+.+|.+++.|.|+|+|.|..|.|.++......+..
T Consensus 76 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~ 113 (120)
T 2crm_A 76 EHLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQTPA 113 (120)
T ss_dssp EEEECSCCTTSCEEEEEEEEETTEECCCCCCCCCCCCC
T ss_pred EEEECCCCCCCEEEEEEEEEcCCccCCCcccEEEEcCC
Confidence 89999999999999999999999999998876655543
No 149
>2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.43 E-value=7.7e-13 Score=106.34 Aligned_cols=95 Identities=31% Similarity=0.391 Sum_probs=80.5
Q ss_pred CCCCCceE-EEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCCcEEEecccCCCeEEecCCCCCcEEEEEEEEEecCc
Q psy7040 56 DPEGPLEV-SNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETGVWIPVGKTREPEMDVTGLTPGHEYKFRVKALNKEG 134 (716)
Q Consensus 56 ~p~~~l~~-~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~~~~g 134 (716)
.||.++.+ ..++.+++.|+|++|..+++.+|.+|.|+++..+...|..+.....+.++|.+|.+++.|.|+|+|.|..|
T Consensus 10 ~~P~~~~~~~~~~~~sv~l~W~~P~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G 89 (110)
T 2crz_A 10 GPCLPPRLQGRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVYQGSEVECTVSSLLPGKTYSFRLRAANKMG 89 (110)
T ss_dssp CCCCCCEECSCCCSSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCEEEEEESCSEEEEESCCTTCEEEECCEEECSSC
T ss_pred CCCCCceeccccCCCEEEEEeCCCCCCCCceeEEEEEEEEeCCCCceEEEEeCCcEEEEECCcCCCCEEEEEEEEEcCCc
Confidence 45555666 46778899999998877778889999999998877888887776779999999999999999999999999
Q ss_pred cCCCccccceEEecCC
Q psy7040 135 ESEPLETFSSIIARDP 150 (716)
Q Consensus 135 ~~~~s~~~~~~~~~~p 150 (716)
.+.+|......+...+
T Consensus 90 ~g~~S~~~~~~T~~~~ 105 (110)
T 2crz_A 90 FGPFSEKCDITTAPGS 105 (110)
T ss_dssp BCCCCCCEEEECCCSC
T ss_pred cCCCCCccccccCCCC
Confidence 9999987777665444
No 150
>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.43 E-value=1.6e-12 Score=104.47 Aligned_cols=92 Identities=30% Similarity=0.515 Sum_probs=78.5
Q ss_pred CCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCCcEEEeccc--CCCeEEecCCCCCcEEEEEEEEEecCc
Q psy7040 57 PEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETGVWIPVGKT--REPEMDVTGLTPGHEYKFRVKALNKEG 134 (716)
Q Consensus 57 p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~--~~~~~~i~~L~~~~~y~~~v~a~~~~g 134 (716)
||..+.+..++.+++.|+|++|..+++.++.+|.|+|+..+...|..+... ..+.++|.+|.+++.|.|+|+|.|..|
T Consensus 10 ~P~~l~~~~~~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G 89 (110)
T 2yuw_A 10 PPTLLTVDSVTDTTVTMRWRPPDHIGAAGLDGYVLEYCFEGTEDWIVANKDLIDKTKFTITGLPTDAKIFVRVKAVNAAG 89 (110)
T ss_dssp CCEEEEEEEECSSCEEEEEECCSSCCSSCEEEEEEEEEETTCSSEEECCSSCCCSSEEEECSCCTTCEEEEEEEEEETTE
T ss_pred CCCccEEEeccCCeEEEEECCCCCCCCCCccEEEEEEEECCCccceEeccccCccCEEEECCCCCCCEEEEEEEEEcCCc
Confidence 344477788999999999999987777889999999998888889887543 468999999999999999999999999
Q ss_pred cCCCccccceEEec
Q psy7040 135 ESEPLETFSSIIAR 148 (716)
Q Consensus 135 ~~~~s~~~~~~~~~ 148 (716)
.+.++.....++..
T Consensus 90 ~s~~S~~~~~v~~~ 103 (110)
T 2yuw_A 90 ASEPKYYSQPILVK 103 (110)
T ss_dssp ECCCEECSSCEECC
T ss_pred CCCCcCCCCCEEec
Confidence 99998877666553
No 151
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.42 E-value=1.5e-12 Score=126.52 Aligned_cols=225 Identities=12% Similarity=0.126 Sum_probs=138.7
Q ss_pred ccceEEEcCCCCCCeEEEEEEEEcCCCCCCCCcccceEEecCCCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceE
Q psy7040 279 PVTGLEVEGLIPNHKYKFRVRAVNKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVG 358 (716)
Q Consensus 279 ~~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~ 358 (716)
....+.|.++...+.+.|+|.|.|..|.... ....+.+..+......|....+ ..+..+.|.|..... +...
T Consensus 60 ~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~--~~~~l~v~~~~~~~~~~~~~~~--~~g~~v~l~C~~~~~----p~~~ 131 (291)
T 1qz1_A 60 DSSTLTIYNANIDDAGIYKCVVTAEDGTQSE--ATVNVKIFQKLMFKNAPTPQEF--KEGEDAVIVCDVVSS----LPPT 131 (291)
T ss_dssp TEEEEEECSCCGGGCEEEEEEEECTTSCEEE--EEEEEEEECCSEEEECCSSEEE--ETTSCEEECCEEECS----SCCE
T ss_pred CeEEEEEecCCCCCCEEEEEEEEcCCCCeeE--EEEEEEeeccccccCCCCcccc--cCCCeEEEEEEeccC----CCCE
Confidence 3578999999999999999999998764211 1111222211111122333322 345567777765221 1112
Q ss_pred EEEEEeecCCCc-e-EEEeeecCCCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCccccc-cccc
Q psy7040 359 YIIEKKEKYSPI-W-EKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRD-QLSD 435 (716)
Q Consensus 359 y~v~~~~~~~~~-~-~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~-~~~~ 435 (716)
+.|...+... . ............+.|.++...+.+.|+|.|.|..+....+.. ..... ..+|.+... ....
T Consensus 132 --v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~-~~l~v---~~~p~~~~~~~~~~ 205 (291)
T 1qz1_A 132 --IIWKHKGRDVILKKDVRFIVLSNNYLQIRGIKKTDEGTYRCEGRILARGEINFKD-IQVIV---NVPPTVQARQSIVN 205 (291)
T ss_dssp --EEEEETTSCSSTTCCTTEEECTTSCEEETTCCGGGCEEEEEEEEEGGGTEEEEEE-EEEEE---EEEEEEEESCSEEE
T ss_pred --EEEEECCEEcccCCCceEEEccCCcEEEccCccccCeEEEEEEEecCCCceeeEE-EEEEE---ecCCcccccccccc
Confidence 3333222110 0 000001123457899999999999999999987542211111 11111 123443321 2335
Q ss_pred EEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCc--EEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEEE
Q psy7040 436 IKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDR--FKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAK 513 (716)
Q Consensus 436 ~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~--~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~ 513 (716)
..+..|..+.|.|.+.+.|.+.+.|++++..+..... .++........|.|.++...|.|.|+|.|.|..|....++.
T Consensus 206 ~~~~~g~~v~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~ 285 (291)
T 1qz1_A 206 ATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEEEDDEKHIFSDDSSELTIRNVDKNDEAEYVCIAENKAGEQDASIH 285 (291)
T ss_dssp EETTSCCCEEEEEEEEEESCCEEEEEETTEECCCC--CCSSEEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred cccccCceEEEEEEEEEeCCCcEEEEECCEECcCCCCCCcceEEcCCCcEEEEEecChhcCEEEEEEEEeCCCceEEEEE
Confidence 5677899999999999999999999999998865531 22333344568999999999999999999999999888877
Q ss_pred EEEE
Q psy7040 514 VTVL 517 (716)
Q Consensus 514 ~~v~ 517 (716)
+.|.
T Consensus 286 l~V~ 289 (291)
T 1qz1_A 286 LKVF 289 (291)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7664
No 152
>3d85_D IL-12B, interleukin-12 subunit P40, cytotoxic lymphocyte; FAB, immune system/cytokine complex; 1.90A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 3d87_B* 3duh_A* 1f42_A* 1f45_A* 3hmx_A* 3qwr_A*
Probab=99.42 E-value=5.5e-12 Score=121.45 Aligned_cols=218 Identities=14% Similarity=0.132 Sum_probs=129.9
Q ss_pred CccEEEEeccccCcceEEEEEEEeCCCCceeEEEEEEec-------------CCCCCCCC-eEEeEEeC-CeEEEEEECC
Q psy7040 183 YNTKLGVRMAQRADAGFYTVTAENINGKDSVEVEVIVLD-------------KPSPPGGP-LKVSNVHA-EGVTLDWKVP 247 (716)
Q Consensus 183 ~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~~~v~~-------------~p~~p~~~-~~~~~~~~-~~~~l~W~~p 247 (716)
.+.+|.|.++...|+|.|+|.| .|.....+.+.|.. ++.||..+ +....... ..++++|.+.
T Consensus 49 ~~~~L~i~~~~~~d~G~YtC~~---~~~~~~~~~l~v~~~~~~~~~t~i~~~~~~pp~~~~lsC~~~~~~~~~~C~W~pg 125 (306)
T 3d85_D 49 SGKTLTIQVKEFGDAGQYTCHK---GGEVLSHSLLLLHKKEDGIWSTDILKDQKEPKNKTFLRCEAKNYSGRFTCWWLTT 125 (306)
T ss_dssp ESSEEEEEECSGGGCEEEEEEE---TTEEEEEEEEEEEEEETTEECCCSSCCCC---CCCCCEEEBSSSSSEEEEEEEES
T ss_pred CCCEEEEEecCcCCCceEEEee---CCcccceEEEEEEeccCCcceeeeecccCCCCCCCcceEEcCCcccCcEEEecCC
Confidence 3679999999999999999999 36655555555532 23333321 44443333 3899999963
Q ss_pred CCCCCCccceEEEEEEeCCCCCeEEccccCcccce-----------E--EEcCCCCC----CeEEEEEEEEcCCCCCCCC
Q psy7040 248 DDDGGQPIEKYVVDKMDEATGRWTPAGETEGPVTG-----------L--EVEGLIPN----HKYKFRVRAVNKQGKSEPL 310 (716)
Q Consensus 248 ~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~-----------~--~i~~L~p~----~~y~~~v~a~n~~g~~~~~ 310 (716)
.. .+ ....|...+. .....|..+......... + .+..+.|. ..|.|+|.|.|..|.....
T Consensus 126 ~~-~~-l~~~~~~~r~-~~~~~~~~C~~~~~~~~~c~v~~~~~~~~~~c~~~~~cp~~~~~~~y~~~V~A~n~lg~~s~~ 202 (306)
T 3d85_D 126 IS-TD-LTFSVKSSRG-SSDPQGVTCGAATLSAERVRGDNKEYEYSVECQEDSACPAAEESLPIEVMVDAVHKLKYEQYT 202 (306)
T ss_dssp CC-SS-EEEEEEEEEC-SSSCEEEEECCCEEEEEEEC--CEEEEEEEEEEETTCCTTSCCCSCEEEEEEEEETTEEEEEE
T ss_pred CC-Cc-eeEEEEEEec-CCCCcceECCCCCCCccceeecCccccceeeeeeccccccccccEEEEEEEEEEccCCccccc
Confidence 32 22 2234544322 222345544331111111 1 23455555 4899999999988854332
Q ss_pred cccceEEecCCCCCCCCCCCcEEEeeeC-CeEEEEecCCCCCCC---ccceEEEEEEeecCCCceEEEeeecCCCCeEEe
Q psy7040 311 TTTASIEAKNPFNQPGKPGTPEIKDFDT-DFVELAWTPPEQNGG---SPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKV 386 (716)
Q Consensus 311 ~~~~~~~~~~~~~~p~~p~~~~~~~~~~-~~i~l~W~~p~~~~~---~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i 386 (716)
. .+.. .....|.+|.++.+..... ..+.|+|.+|...+. .....|+|+|+..+...|.... ....+++.|
T Consensus 203 ~---~f~~-~~iVkPdPP~~l~~~~~~~~~~l~vsW~~P~~~~~p~~~~~L~Y~vryr~~~~~~~~~~~--~~~~ts~~l 276 (306)
T 3d85_D 203 S---SFFI-RDIIKPDPPKNLQLKPLKNSRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKSKREKKDRV--FTDKTSATV 276 (306)
T ss_dssp E---EECH-HHHBCCCCCEEEEEEEC----CEEEEEECCTTSCSCTTTSCEEEEEEEECC------CEE--EESSSEEEE
T ss_pred e---EEEe-hhcEecCCCceEEEEEecCCCcEEEEEcCCCCCcCCCceeeEEEEEEEEECCCCccEEEe--eccccEEEE
Confidence 1 1111 1225688899999887544 789999999754322 1236899999987755554332 234566766
Q ss_pred cCCCCCCeEEEEEEEEeCCCCCCCCCCCC
Q psy7040 387 LDLIEGNQYEFRVLAVNKGGPGEPSDPTA 415 (716)
Q Consensus 387 ~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~ 415 (716)
. +++.|.|+|+|.+..|.|.+|+.+.
T Consensus 277 ~---~~~~Y~vqVRa~~~~~~G~WSeWS~ 302 (306)
T 3d85_D 277 I---CRKNASISVRAQDRYYSSSWSEWAS 302 (306)
T ss_dssp C---CCSSCEEEEEEEESSSCCCCCCCEE
T ss_pred e---CCCeEEEEEEeccCCCCCCCCCCCC
Confidence 4 5899999999999989888888753
No 153
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.42 E-value=1.9e-12 Score=134.07 Aligned_cols=286 Identities=15% Similarity=0.098 Sum_probs=169.1
Q ss_pred CCeEEecCCCCCCeEEEEEEEEeCCCCC-CCCCCCCceEee-cCCCCCcccccccccEEEecCCeEEEEEEEecc-CCC-
Q psy7040 381 TPKGKVLDLIEGNQYEFRVLAVNKGGPG-EPSDPTAPHIAR-AKKVSPYINRDQLSDIKVRAGSNFEFDINVIGE-PIP- 456 (716)
Q Consensus 381 ~~~~~i~~l~~~~~Y~~~v~a~n~~g~~-~~s~~~~~~~~~-~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~-p~~- 456 (716)
..++.|.++...+...|+|.|.|..+.. ..+... ...+. ....+|.+....+. ..+..|..+.|.|.+.+. |.+
T Consensus 78 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~-~l~V~~~~~~~P~i~~~~~~-~~~~~g~~v~L~C~~~g~~P~p~ 155 (444)
T 1igt_B 78 TLYLQMSRLKSEDTAMYYCARHGGYYAMDYWGQGT-TVTVSSAKTTAPSVYPLAPV-CGDTTGSSVTLGCLVKGYFPEPV 155 (444)
T ss_dssp EEEEEECSCCGGGCEEEEEEEECSSSCEEEEBCCE-EEEECSCCCBCCEEEEECCC-SSCCCSSCEEEEEEEEEEBSSCC
T ss_pred eEEEEECCCCHHHCEEEEEEEecCCcccccccCcE-EEEecCCCCCCCceeEeccc-ccCCCCCcEEEEEEEcceeCCCc
Confidence 4578899999999999999999875421 011111 12222 22234544321111 123689999999999875 766
Q ss_pred eEEEEeCCeEecc--C------CcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEEEEEE------------
Q psy7040 457 TKEWLCNDITIIS--K------DRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTV------------ 516 (716)
Q Consensus 457 ~~~W~~~~~~~~~--~------~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v------------ 516 (716)
.+.|++++..+.. . ..+.. ...|.|.+....| |.|+|.|.|..|.......+.+
T Consensus 156 ~v~W~~~~~~~~~~~~~~~~~~~~~~~-----~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~i~~~~~~~~~~~~~~ 229 (444)
T 1igt_B 156 TLTWNSGSLSSGVHTFPAVLQSDLYTL-----SSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRGPTIKPCPPCK 229 (444)
T ss_dssp EEEEGGGTBCTTEEECCCEEETTEEEE-----EEEEEECSTTTTT-SCCEEEEEETTTTEEEEEECCCCCCSCCCCCCCS
T ss_pred EEEEecCCCCCCeEecCccccCCcEEE-----EEEEEEchhhcCC-CeEEEEEEeCCCCcceEEEeccCCCCcccCCccc
Confidence 9999998865310 0 11111 2468899999888 9999999999998655444422
Q ss_pred ----E---EEEEEEeCCC-----CCCCCceeeEEEEEEecCCCceeeeEEEccceeeeecc------c----cceeEEEE
Q psy7040 517 ----L---GCSLKWNPPE-----DDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDN------V----DYFTKITI 574 (716)
Q Consensus 517 ----~---~v~l~W~~p~-----~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~------~----~~~~~~~i 574 (716)
. ...+...+|. ..+......|.+...+...+.+.+.|++.+........ . .....+.|
T Consensus 230 ~~~~~~~~~p~v~~~~p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I 309 (444)
T 1igt_B 230 CPAPNLLGGPSVFIFPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPI 309 (444)
T ss_dssp CCCSCCCCCCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTCCCCEEEEEETTEECSSTTCBCCEEECSSSEEEEEEEEC
T ss_pred cCCcccCCCceEEecCCchhheeecCCCcEEEEEEeecccCCCCeEEEEEECCccccCcccccceeCCCCcEEEEEEEEE
Confidence 0 2233233432 22334455666654320011234999998754321100 0 11246888
Q ss_pred cCCCCCCeEEEEEEEEcCCCCCccceeeec-cCCCCCCcccee-------eccceeEEEEEEeeEEEEeeeeccCcee--
Q psy7040 575 RPLQRSDTAQYTVTATNSQGKDQVFIEVVV-TDKPSAPEGPIQ-------WLLTLTDVTWEISNYLQELHSSLMPISL-- 644 (716)
Q Consensus 575 ~~L~~~~~y~~~v~a~n~~G~~~~s~~~~v-~~~p~~~~~~~~-------~~~~~v~l~w~i~~y~v~~~~~~~~~~~-- 644 (716)
.+++..+.+.|+|.|.|..|.......+.. ......|. +.. +....+. |.|.+.|
T Consensus 310 ~~v~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~-v~~~~~~~~~~~~~~~~--------------L~C~~~g~~ 374 (444)
T 1igt_B 310 QHQDWMSGKEFKCKVNNKDLPAPIERTISKPKGSVRAPQ-VYVLPPPEEEMTKKQVT--------------LTCMVTDFM 374 (444)
T ss_dssp CHHHHHTTCEEEEEEECTTCSSCEEEEEECCCCCCBCCE-EEEECCCGGGTTSSEEE--------------EEEEEEEEB
T ss_pred cHHHhccCCcEEEEEEcCCCCCceEEEEeccCCCCCCCE-EEEeCCChHHccCCeEE--------------EEEEEEeee
Confidence 888889999999999999886643333321 12222232 221 1222354 4444444
Q ss_pred ----eEEEEeCCeEeeecc--------cc---eeeEEEEccCCCCCcEEEEEEEEcCCCC
Q psy7040 645 ----ESQYLMNDKRVTIDN--------VD---YFTKITIRPLQRSDTAQYTVTATNSQGK 689 (716)
Q Consensus 645 ----~~~W~~~~~~~~~~~--------~~---~~~~~~i~~l~~~~~y~y~~~a~n~~G~ 689 (716)
.+.|+++|..+.... .+ ....|.|.....+|.|.|+|.|.|..-.
T Consensus 375 P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~a~n~~l~ 434 (444)
T 1igt_B 375 PEDIYVEWTNNGKTELNYKNTEPVLDSDGSYFMYSKLRVEKKNWVERNSYSCSVVHEGLH 434 (444)
T ss_dssp SSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTCCCEEEEEECTTSG
T ss_pred CCCCEEEEEECCEEccccccccceeCCCCCEEEEEEEEEChHHhcCCCeEEEEEECCCcC
Confidence 689999998874320 11 1134566666667799999999997643
No 154
>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.42 E-value=8.7e-13 Score=108.96 Aligned_cols=115 Identities=20% Similarity=0.284 Sum_probs=91.9
Q ss_pred EEEEEcCCCCCCCCcccceEEecCCCCCCC-CCCCcEEEeeeCCeEEEEecCCCCC-CCccceEEEEEEeecCCCceEEE
Q psy7040 297 RVRAVNKQGKSEPLTTTASIEAKNPFNQPG-KPGTPEIKDFDTDFVELAWTPPEQN-GGSPIVGYIIEKKEKYSPIWEKC 374 (716)
Q Consensus 297 ~v~a~n~~g~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~i~l~W~~p~~~-~~~~i~~y~v~~~~~~~~~~~~~ 374 (716)
+|.|.|..|.+..+... .+.+....|. +|.++.+.....+++.|+|.+|..+ .++.+.+|.|+|+..+...|...
T Consensus 3 ~V~A~n~~G~g~~s~~~---~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~ 79 (124)
T 2ed9_A 3 SGSSGNRYGPGVSTDDI---TVVTLSDVPSAPPQNVSLEVVNSRSIKVSWLPPPSGTQNGFITGYKIRHRKTTRRGEMET 79 (124)
T ss_dssp SCCCCCCCCCCCCCCCC---CCCCCCCCCSSCCBSCCEEEEETTEEEEECBCCCTTTCCSCCCEEEEEEEESSSSCCEEE
T ss_pred eEEEEeCCccCCCCCCE---EEEcCCCCCCCCCeeeEEEEcCCCEEEEEEECcCCcCCCcEEeEEEEEEEECCCCcceEE
Confidence 57889999988766554 3333445666 7889999999999999999998653 45579999999998776655443
Q ss_pred eeecCCCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCc
Q psy7040 375 AQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAP 416 (716)
Q Consensus 375 ~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~ 416 (716)
......++.|.+|.+++.|.|+|+|.|..|.|.+|.....
T Consensus 80 --~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~ 119 (124)
T 2ed9_A 80 --LEPNNLWYLFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTA 119 (124)
T ss_dssp --ECSSCSEEEEECCCSSCEEEECEEEECSSCBCCCCCCEEE
T ss_pred --ecCCcCEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEE
Confidence 4567889999999999999999999999999988876443
No 155
>2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.42 E-value=1.2e-12 Score=105.29 Aligned_cols=102 Identities=28% Similarity=0.380 Sum_probs=84.2
Q ss_pred CCCCCCCCCcEE-EeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEE
Q psy7040 322 FNQPGKPGTPEI-KDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVL 400 (716)
Q Consensus 322 ~~~p~~p~~~~~-~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~ 400 (716)
...|.+|.++.+ .....+++.|+|.+|..+++.+|.+|.|+++......|.... ......+++.+|.+++.|.|+|+
T Consensus 6 ~~~P~~P~~~~~~~~~~~~sv~l~W~~P~~~~~~~i~~Y~v~~~~~~~~~~~~~~--~~~~~~~~v~~L~p~t~Y~frV~ 83 (110)
T 2crz_A 6 SGPPGPCLPPRLQGRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVY--QGSEVECTVSSLLPGKTYSFRLR 83 (110)
T ss_dssp CCCCCCCCCCEECSCCCSSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCEEEE--EESCSEEEEESCCTTCEEEECCE
T ss_pred CCCCCCCCCceeccccCCCEEEEEeCCCCCCCCceeEEEEEEEEeCCCCceEEEE--eCCcEEEEECCcCCCCEEEEEEE
Confidence 367889999998 467788999999988777778899999999987767787665 34678999999999999999999
Q ss_pred EEeCCCCCCCCCCCCceEeecCCCC
Q psy7040 401 AVNKGGPGEPSDPTAPHIARAKKVS 425 (716)
Q Consensus 401 a~n~~g~~~~s~~~~~~~~~~~~~~ 425 (716)
|.|..|.|.+|......+...++.+
T Consensus 84 A~n~~G~g~~S~~~~~~T~~~~P~~ 108 (110)
T 2crz_A 84 AANKMGFGPFSEKCDITTAPGSGPS 108 (110)
T ss_dssp EECSSCBCCCCCCEEEECCCSCCCC
T ss_pred EEcCCccCCCCCccccccCCCCCCC
Confidence 9999999999887666555444333
No 156
>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.42 E-value=1.9e-12 Score=104.13 Aligned_cols=98 Identities=22% Similarity=0.356 Sum_probs=85.3
Q ss_pred CCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEE
Q psy7040 323 NQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAV 402 (716)
Q Consensus 323 ~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~ 402 (716)
.+|.+|.++.+...+.+++.|+|.+|..+++.++.+|.|+++..+...|............+++.+|.+++.|.|+|+|.
T Consensus 6 ~~P~~P~~l~~~~~~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~ 85 (110)
T 2yuw_A 6 SGTSPPTLLTVDSVTDTTVTMRWRPPDHIGAAGLDGYVLEYCFEGTEDWIVANKDLIDKTKFTITGLPTDAKIFVRVKAV 85 (110)
T ss_dssp CCSCCCEEEEEEEECSSCEEEEEECCSSCCSSCEEEEEEEEEETTCSSEEECCSSCCCSSEEEECSCCTTCEEEEEEEEE
T ss_pred CCCCCCCccEEEeccCCeEEEEECCCCCCCCCCccEEEEEEEECCCccceEeccccCccCEEEECCCCCCCEEEEEEEEE
Confidence 57889999999999999999999998877777899999999988777888765555678899999999999999999999
Q ss_pred eCCCCCCCCCCCCceEee
Q psy7040 403 NKGGPGEPSDPTAPHIAR 420 (716)
Q Consensus 403 n~~g~~~~s~~~~~~~~~ 420 (716)
|..|.|.++.....++..
T Consensus 86 n~~G~s~~S~~~~~v~~~ 103 (110)
T 2yuw_A 86 NAAGASEPKYYSQPILVK 103 (110)
T ss_dssp ETTEECCCEECSSCEECC
T ss_pred cCCcCCCCcCCCCCEEec
Confidence 999999998877666543
No 157
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.41 E-value=9.9e-12 Score=120.49 Aligned_cols=227 Identities=15% Similarity=0.081 Sum_probs=140.0
Q ss_pred cCCccEEEEeccccCcceEEEEEEEeCCCCceeEEEEEEecCCCCC-CCCeEEeEEeCCeEEEEEECCCCCCCCccceEE
Q psy7040 181 LDYNTKLGVRMAQRADAGFYTVTAENINGKDSVEVEVIVLDKPSPP-GGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYV 259 (716)
Q Consensus 181 ~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~~p-~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~ 259 (716)
......|.|.+++..|+|.|+|.|.|..|..+..+.|.|..+|.+. ..+.......+..+.|.|..... .+...+.
T Consensus 47 ~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~L~C~~~~~---~~~~~v~ 123 (289)
T 3ejj_X 47 ESPGSTLTTRNATFKNTGTYRCTELEDPMAGSTTIHLYVKDPAHSWNLLAQEVTVVEGQEAVLPCLITDP---ALKDSVS 123 (289)
T ss_dssp CSSCCEEEESSCCGGGCEEEEEECCC-----CEEEEEEECCSSCSEEESCSEEEEETTSCEEECEEESCG---GGGGSEE
T ss_pred cCCccEEEEeeeccccCEEEEEEEeccCCcceeEEEEEEeCCCcceecccceEEEecCCceEeEEEccCC---CcceEEE
Confidence 3456899999999999999999999999998999999998877541 11134455678899999996421 1112244
Q ss_pred EEEEeC---CCCCeEEccccCcccceEEEcCCCCCCeEEEEEEEEcCCCCCCCCcccceEEecCCCCCCCCCCCcEEEee
Q psy7040 260 VDKMDE---ATGRWTPAGETEGPVTGLEVEGLIPNHKYKFRVRAVNKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDF 336 (716)
Q Consensus 260 v~~~~~---~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~ 336 (716)
+..... ........ .....+.|.++...+.+.|+|.|.+..+.. .+.. + .+.+..
T Consensus 124 W~~~~~~~~~~~~~~~~----~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~-~~~~---~-------------~l~V~~- 181 (289)
T 3ejj_X 124 LMREGGRQVLRKTVYFF----SPWRGFIIRKAKVLDSNTYVCKTMVNGRES-TSTG---I-------------WLKVNR- 181 (289)
T ss_dssp EEEGGGEECCTTCCEEE----ETTTEEEESSCCGGGCEEEEEEEEETTEEE-ECCC---E-------------EEEEES-
T ss_pred EEecCCeecCCCccEEE----CCCCCEEEeecccccCEEEEEEEEeCCCcc-cccc---E-------------EEEEEE-
Confidence 332111 11111111 123568999999999999999998421110 0000 0 000000
Q ss_pred eCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCc
Q psy7040 337 DTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAP 416 (716)
Q Consensus 337 ~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~ 416 (716)
..
T Consensus 182 ---------~~--------------------------------------------------------------------- 183 (289)
T 3ejj_X 182 ---------VH--------------------------------------------------------------------- 183 (289)
T ss_dssp ---------SC---------------------------------------------------------------------
T ss_pred ---------CC---------------------------------------------------------------------
Confidence 00
Q ss_pred eEeecCCCCCcccccccccEEEecCCeEEEEEEEec-cCCCeEEEEeCCeEeccCCcEEEEeC--CCeEEEEECCCCCCC
Q psy7040 417 HIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIG-EPIPTKEWLCNDITIISKDRFKIVND--DKSTKLKVFDSKRGD 493 (716)
Q Consensus 417 ~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~-~p~~~~~W~~~~~~~~~~~~~~~~~~--~~~~~l~i~~l~~~~ 493 (716)
..+|.+.. .+....+..|..+.|.|.+.+ .|.+.+.|++++..+........... .....|.|.++...|
T Consensus 184 ------~~~p~i~~-~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d 256 (289)
T 3ejj_X 184 ------PEPPQIKL-EPSKLVRIRGEAAQIVCSATNAEVGFNVILKRGDTKLEIPLNSDFQDNYYKKVRALSLNAVDFQD 256 (289)
T ss_dssp ------CCCCEEEE-ESSSEECCSSSCEEEEEEEEESSSCCEEEEEETTEECCCCEEEEECSSSEEEEEEEEESSCCSSS
T ss_pred ------CCCCeEEe-cCCceEEEeCCcEEEEEEeCCCCCceEEEEEECCEEeeccCCcccccceEEeeEEEEEEeecccC
Confidence 00111100 011233457888899999988 78999999999988754332221111 125589999999999
Q ss_pred ceeEEEEEEcCCCceeeEEEEEEE
Q psy7040 494 SGIYTLAVKNSWGTDKGTAKVTVL 517 (716)
Q Consensus 494 ~~~y~~~a~n~~g~~~~s~~~~v~ 517 (716)
.|.|+|.|.|..|....++.+.+.
T Consensus 257 ~G~Y~C~a~N~~G~~~~s~~L~~~ 280 (289)
T 3ejj_X 257 AGIYSCVASNDVGTRTATMNFQVV 280 (289)
T ss_dssp CEEEEEEEECSSCEEEEEEEEECC
T ss_pred CEEEEEEEEcCCCCccccEEEEEE
Confidence 999999999999999888776553
No 158
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.41 E-value=3.6e-12 Score=119.77 Aligned_cols=189 Identities=21% Similarity=0.264 Sum_probs=116.5
Q ss_pred cccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcE-EEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeE
Q psy7040 433 LSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRF-KIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGT 511 (716)
Q Consensus 433 ~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~-~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s 511 (716)
...+.+.+|+.+.|.|.+.+.|.+.+.|++++..+...... ..........|.|.++...|.|.|+|.|.|..|.....
T Consensus 22 ~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~ 101 (241)
T 3grw_A 22 KKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQT 101 (241)
T ss_dssp CCEEEEETTSEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CcceEEcCCCeEEEEEEecCCCCceeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEEEEEeecCCceEEE
Confidence 34678999999999999999999999999999887644322 11222334589999999999999999999988766555
Q ss_pred EEEEEEEEEEEEeCCCCCCCCceeeEEEEEEecCCCceeeeEEEccceeeeeccccceeEEEEcCCCCCCeEEEEEEEEc
Q psy7040 512 AKVTVLGCSLKWNPPEDDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDNVDYFTKITIRPLQRSDTAQYTVTATN 591 (716)
Q Consensus 512 ~~~~v~~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n 591 (716)
..+.+. -..+. .++ ...... ... .+..|..-.+.|.+..
T Consensus 102 ~~l~V~-----~~~~~----~~~------------------~~~~~~-----------~~~---~~~~g~~v~L~C~~~~ 140 (241)
T 3grw_A 102 YTLDVL-----ERSPH----RPI------------------LQAGLP-----------ANQ---TAVLGSDVEFHCKVYS 140 (241)
T ss_dssp EEEEEE-----CCCCC----CCE------------------EEECTT-----------CSE---ECCTTCCEEEEEEEEC
T ss_pred EEEEEe-----ccCCC----Cce------------------eecCCC-----------ccc---eecCCCEEEEEEEEec
Confidence 444433 00110 000 000000 000 1334556666776632
Q ss_pred CCCCCccceeeeccCCCCCCccceeeccceeEEEEEEeeEEEEeeeeccCceeeEEEEe----CCeEeeec---------
Q psy7040 592 SQGKDQVFIEVVVTDKPSAPEGPIQWLLTLTDVTWEISNYLQELHSSLMPISLESQYLM----NDKRVTID--------- 658 (716)
Q Consensus 592 ~~G~~~~s~~~~v~~~p~~~~~~~~~~~~~v~l~w~i~~y~v~~~~~~~~~~~~~~W~~----~~~~~~~~--------- 658 (716)
. +.. .+.|++ +|..+...
T Consensus 141 ~-----p~p--------------------------------------------~v~W~~~~~~~g~~~~~~~~~~~~~~~ 171 (241)
T 3grw_A 141 D-----AQP--------------------------------------------HIQWLKHVEVNGSKVGPDGTPYVTVLK 171 (241)
T ss_dssp S-----SCC--------------------------------------------EEEEEEECCSSSCSSCTTTCCCEEEEE
T ss_pred C-----CCC--------------------------------------------EEEEEEcccCCCcccCCCCceeeeeee
Confidence 0 000 345555 44443322
Q ss_pred -----ccceeeEEEEccCCCCCcEEEEEEEEcCCCCceeeEEEEEecCCCCCCCCeEE
Q psy7040 659 -----NVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTDKPSAPEGPIQI 711 (716)
Q Consensus 659 -----~~~~~~~~~i~~l~~~~~y~y~~~a~n~~G~~~~s~~l~v~~~p~~p~~p~~~ 711 (716)
.......|.|.++...|.|.|+|.|.|..|....+..|.|..+|.+|..++..
T Consensus 172 ~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~~~ve~ 229 (241)
T 3grw_A 172 SWISESVEADVRLRLANVSERDGGEYLCRATNFIGVAEKAFWLSVHGPRAAEEELVEA 229 (241)
T ss_dssp EEECSBSEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEC-------------
T ss_pred EeeeeecCCceEEEECcCCcccCcEEEEEEecCcceEEEEEEEEecCCCCCCccceec
Confidence 11234679999999999999999999999999999999999999999777654
No 159
>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.40 E-value=2.9e-12 Score=104.55 Aligned_cols=110 Identities=21% Similarity=0.279 Sum_probs=86.1
Q ss_pred CCCCCcccceEEecCCCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCC-CceEEEeeecCCCCeE
Q psy7040 306 KSEPLTTTASIEAKNPFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYS-PIWEKCAQTEGDTPKG 384 (716)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~-~~~~~~~~~~~~~~~~ 384 (716)
.+..+.. +.+.+....|.+|.++.+...+.+++.|+|.+|. +++++|.+|.|+++.... ..|..... .....+
T Consensus 2 ~s~~S~~---~~~~t~~~~P~~P~~~~~~~~~~~sv~l~W~~p~-~~~~~i~~Y~v~~~~~~~~~~~~~~~~--~~~~~~ 75 (118)
T 1x3d_A 2 SSGSSGA---EIFTTLSCEPDIPNPPRIANRTKNSLTLQWKAPS-DNGSKIQNFVLEWDEGKGNGEFCQCYM--GSQKQF 75 (118)
T ss_dssp CCCCCCC---CCCCCCCSCCCCCCCCEEEEEETTEEEEECCCCC-CCSSCEEEEEEEECTTTSSSCCEEEEE--ESCSEE
T ss_pred CCCCCcC---EEEEcCCCCCcCCCCcEEeccCCCEEEEEECCCC-CCCCcceEEEEEEecCCCCCCeEEeec--cCCcEE
Confidence 3444444 3344455788999999999999999999999987 456689999999987764 56765543 345889
Q ss_pred EecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeec
Q psy7040 385 KVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARA 421 (716)
Q Consensus 385 ~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~ 421 (716)
.+.+|.+++.|.|+|+|.|..|.|.++......+...
T Consensus 76 ~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 112 (118)
T 1x3d_A 76 KITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTSGC 112 (118)
T ss_dssp EEESCCTTCEEEEECCEEESSCBCCCCCCEEEECSCC
T ss_pred EeCCCCCCCEEEEEEEEEECCCCCCCccCEEEEcCCC
Confidence 9999999999999999999999999888765554433
No 160
>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.40 E-value=3.2e-13 Score=107.85 Aligned_cols=96 Identities=32% Similarity=0.511 Sum_probs=81.5
Q ss_pred CCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEE
Q psy7040 323 NQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAV 402 (716)
Q Consensus 323 ~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~ 402 (716)
.+|.+|..+.+..++.+++.|+|.+|..++|.+|.+|.|+++..+...|............+++.+|.+++.|.|+|+|.
T Consensus 9 ~~p~~P~~P~v~~v~~~sv~L~W~~P~~~gg~~i~~Y~Ve~~~~~~~~w~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~ 88 (112)
T 1bpv_A 9 SPIDPPGKPVPLNITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANFSNILENEFTVSGLTEDAAYEFRVIAK 88 (112)
T ss_dssp CCCCCCCCCEEEEEETTEEEEECCCCSCCTTCCCSCCEEEEEETTSCCCEECCCSCCCSSEEEECSCCSSCCEEEEEEEE
T ss_pred CCCCCCCCCEEEEeeCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEeecccCccCEEEECCCCCCCEEEEEEEEE
Confidence 45778888889999999999999998888888899999999988777888765545667899999999999999999999
Q ss_pred eCCCC-CCCCCCCCceE
Q psy7040 403 NKGGP-GEPSDPTAPHI 418 (716)
Q Consensus 403 n~~g~-~~~s~~~~~~~ 418 (716)
|..|. |.+|.....++
T Consensus 89 N~~G~~s~~S~~~~~~t 105 (112)
T 1bpv_A 89 NAAGAISPPSEPSDAIT 105 (112)
T ss_dssp CTTSCEEEEEEEEEEEC
T ss_pred ECCCCCCCCCCCCCCEE
Confidence 99996 88776544443
No 161
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.40 E-value=2.9e-11 Score=117.21 Aligned_cols=254 Identities=12% Similarity=0.037 Sum_probs=153.8
Q ss_pred EEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCCCCCeEEccccCcccceEEEcCCCCCCeEEEEEEEEcCCCCCCCC
Q psy7040 231 KVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEATGRWTPAGETEGPVTGLEVEGLIPNHKYKFRVRAVNKQGKSEPL 310 (716)
Q Consensus 231 ~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~~ 310 (716)
.+....++.++|.|... + .+.|...+...+... .....+.|.++...+.+.|+|.|.| |.
T Consensus 21 ~~~v~~G~~v~l~C~~~----~------~i~W~~~~~~~~~~~----~~~~~L~i~~~~~~d~G~Y~C~~~n--g~---- 80 (290)
T 2o26_X 21 ELIVEAGDTLSLTCIDP----D------FVRWTFKTYFNEMVE----NKKNEWIQEKAEATRTGTYTCSNSN--GL---- 80 (290)
T ss_dssp EEEEETTSCEEEEEECT----T------EEEEEEECSSSCEEE----ECSSEEEETTCCGGGCEEEEEEESS--SC----
T ss_pred eEEEcCCCcEEEEECCC----C------cEEEecCCcceeeec----CCCceEEEeccCHHhCeEEEEEeeC--Cc----
Confidence 45566789999999952 2 233322222221111 1238999999999999999999998 43
Q ss_pred cccceEEecCCCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEE-eecCCCc--eEEEeeecCCCCeEEec
Q psy7040 311 TTTASIEAKNPFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEK-KEKYSPI--WEKCAQTEGDTPKGKVL 387 (716)
Q Consensus 311 ~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~-~~~~~~~--~~~~~~~~~~~~~~~i~ 387 (716)
.....+.+..+...-..+.++.+ ..+..+.|.|.... +- .-.+.| +..+..- ..... ......+.|.
T Consensus 81 ~~~~~l~V~~~~~~~~~~~~~~~--~~g~~v~l~C~~~~-----p~-~~~v~W~~~~g~~l~~~~~~~--~~~~~~L~i~ 150 (290)
T 2o26_X 81 TSSIYVFVRDPAKLFLVGLPLFG--KEDSDALVRCPLTD-----PQ-VSQYSLIECDGKSLPTDLTFV--PNPKAGITIK 150 (290)
T ss_dssp EEEEEEEEECSSCCBCCCCCEEE--ETTSCEEECCCBSC-----CS-CEEEEEEETTSCCCCTTCEEE--EETTTEEEEE
T ss_pred cEEEEEEEeCCCcccccccceEE--ecCCeEEEeCcCCC-----CC-CceEEEEeCCCcCCCCCCcee--eCCCCCEEEe
Confidence 11112333221111122333333 35666888887631 11 122333 2222100 00111 1123578999
Q ss_pred CCCCCCeE-EEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccCCCe-EEEEeCCe
Q psy7040 388 DLIEGNQY-EFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPT-KEWLCNDI 465 (716)
Q Consensus 388 ~l~~~~~Y-~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~-~~W~~~~~ 465 (716)
++...+.+ .|+|.|.|..|.. .+.............+|.+... +....+..|+.+.|.|.+.+.|.+. +.|++++.
T Consensus 151 ~v~~~d~G~~Y~C~a~n~~~~~-~s~~~~l~V~~~~~~~P~i~~~-~~~~~v~~G~~v~l~C~~~g~p~p~~i~W~~~~~ 228 (290)
T 2o26_X 151 NVKRAYHRLCVRCAAQRDGTWL-HSDKFTLKVREAIKAIPVVSVP-ETSHLLKKGDTFTVVCTIKDVSTSVNSMWLKMNP 228 (290)
T ss_dssp SCCGGGTTCEEEEEEEETTEEE-ECCCEEEEEECCCCSCCEEECS-CSBCCCCTTCCEEEEEEEEESSTTCEEEEEEESS
T ss_pred cccHHHCCCEEEEEEEECCceE-EeEEEEEEEEeCCCCCCccccC-CCcceEecCCcEEEEEEEecCCcceeEEEecCCC
Confidence 99999999 9999999974432 1211112221123346665432 3344788999999999999999996 99999987
Q ss_pred Ee----ccCCcEEEE---eCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEEEEEE
Q psy7040 466 TI----ISKDRFKIV---NDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTV 516 (716)
Q Consensus 466 ~~----~~~~~~~~~---~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v 516 (716)
.+ .......+. .......|.|.++...|.|.|+|.|.|..|....++.+.|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V 286 (290)
T 2o26_X 229 QPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNTFGSANVTTTLKV 286 (290)
T ss_dssp SEEECCCEECCEEEEETTEEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEECC
T ss_pred CCccceeecccccccCceeeEEEEEEEEcCCCcccCeEEEEEEeCCCCcEEEEEEEEE
Confidence 63 222222222 1123568999999999999999999999999877776654
No 162
>3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens}
Probab=99.40 E-value=3.7e-11 Score=108.76 Aligned_cols=185 Identities=10% Similarity=0.060 Sum_probs=115.5
Q ss_pred CCCCCeEEeEE-eCCeEEEEEECCCCCCCCccc-eEEEEEEeCCC-----------CCeEEccccCcccceEEEcCCCCC
Q psy7040 225 PPGGPLKVSNV-HAEGVTLDWKVPDDDGGQPIE-KYVVDKMDEAT-----------GRWTPAGETEGPVTGLEVEGLIPN 291 (716)
Q Consensus 225 ~p~~~~~~~~~-~~~~~~l~W~~p~~~~~~~~~-~y~v~~~~~~~-----------~~~~~~~~~~~~~~~~~i~~L~p~ 291 (716)
.|.+ +..... .-..++.+|++.. +.+. .. .|.+.+..... .....+.........+.+..+...
T Consensus 3 ~~~n-lsC~~~~~~~~~~C~W~~g~-~~~l-~t~~~~l~~~~~~~~c~~~~~~~~~~~~~~C~~~~~~~~~C~~~~~~~~ 79 (206)
T 3v6o_A 3 VNIN-ISCETDGYLTKMTCRWSTST-IQSL-AESTLQLRYHRSSLYCSDIPSIHPISEPKDCYLQSDGFYECIFQPIFLL 79 (206)
T ss_dssp -CCC-CEEEECTTSSCEEEEECCCC----------EEEEEEECSSCCCSSCCCCSSCEEECEEECTTSCEEEEECSCCTT
T ss_pred CCEE-EEEEECCCCcEEEEEecCCC-cCCc-ccccEEEEEEEcCcCccccccccccCcCCCCCCCCCCCceEEeCcHHhc
Confidence 3455 666665 3578999999633 2222 23 67777754321 011222221223457888889999
Q ss_pred CeEEEEEEEEcCCCCCCCCcccceEEecCCCCCCCCCCCcEEEee-eCCeEEEEecCCCCCCCccceEEEEEEeecC-CC
Q psy7040 292 HKYKFRVRAVNKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDF-DTDFVELAWTPPEQNGGSPIVGYIIEKKEKY-SP 369 (716)
Q Consensus 292 ~~y~~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~-~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~-~~ 369 (716)
+.|.|+|.|.|..|..... .. .........|.+|.++.+... ..+.+.|+|.+|.... ....|.|+|+..+ ..
T Consensus 80 ~~Y~~~V~a~N~~G~~~s~-~~--~~~~~~~vkp~pP~~l~v~~~~~~~~l~l~W~~P~~~~--~~l~yev~y~~~~~~~ 154 (206)
T 3v6o_A 80 SGYTMWIRINHSLGSLDSP-PT--CVLPDSVVKPLPPSSVKAEITINIGLLKISWEKPVFPE--NNLQFQIRYGLSGKEV 154 (206)
T ss_dssp SCEEEEEEEC---CCEECC-CE--EECGGGGBCCCCCCSCEEEEETTTTEEEEEC----------CEEEEEEEEESSSSC
T ss_pred ccEEEEEEEEcCCccccCC-cc--cEeecceEcCCCCCceEeEEecCCCeEEEEECCCCCCC--CcEEEEEEEEECCCCC
Confidence 9999999999998865422 11 111122356889999998765 5789999999875432 3579999999876 35
Q ss_pred ceEEEeeecCCCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCce
Q psy7040 370 IWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPH 417 (716)
Q Consensus 370 ~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~ 417 (716)
.|............+.+.+|.+++.|.|+|+|.+..|.|.+|+.+...
T Consensus 155 ~w~~~~~~~~~~~~~~l~~L~p~t~Y~vqVRa~~~~~~G~WSeWS~~~ 202 (206)
T 3v6o_A 155 QWKMYEVYDAKSKSVSLPVPDLCAVYAVQVRCKRLDGLGYWSNWSNPA 202 (206)
T ss_dssp CCEEEEECC---CEEEECCSCTTSCEEEEEEEEETTSCSCCCCCCCCE
T ss_pred ceEEEecccCcceeEEeecCCCCCEEEEEEEEecCCCCCcCCCCCcce
Confidence 787665443444578999999999999999999988888888877544
No 163
>1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.39 E-value=3.4e-12 Score=102.43 Aligned_cols=94 Identities=21% Similarity=0.289 Sum_probs=78.3
Q ss_pred CCCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCC-CcEEEecccCCCeEEecCCCCCcEEEEEEEEEecC
Q psy7040 55 LDPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPET-GVWIPVGKTREPEMDVTGLTPGHEYKFRVKALNKE 133 (716)
Q Consensus 55 ~~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~-~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~~~~ 133 (716)
+.||.++.+..++.+++.|+|++|..+++.+|.+|.|+++..+. ..|..+.....++++|.+|.+++.|.|||+|.|..
T Consensus 8 P~~P~~p~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~ 87 (109)
T 1x5x_A 8 PSMPASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYDGEDLAYTVKNLRRSTKYKFKVIAYNSE 87 (109)
T ss_dssp CCCCCCCEEEEECSSEEEEECCCCSSCCSSSSCEEEEEECCSSSSCCCEEEEEESCSEEEEESCCSSCEEEEEEEEECSS
T ss_pred CcCCCCCEEEEccCCEEEEEEcCCCCCCCCcccEEEEEEecCCCCcceEEeEeCCccEEEECCCCCCCEEEEEEEEEeCC
Confidence 45566678999999999999999987777689999999987665 35666655557899999999999999999999999
Q ss_pred ccCCCccccceEEec
Q psy7040 134 GESEPLETFSSIIAR 148 (716)
Q Consensus 134 g~~~~s~~~~~~~~~ 148 (716)
|.+.++......+..
T Consensus 88 G~s~~S~~~~~~T~~ 102 (109)
T 1x5x_A 88 GKSNPSEVVEFTTCP 102 (109)
T ss_dssp CEEEECCCEEEECCC
T ss_pred CCcCCccCEEeEeCC
Confidence 999888776665543
No 164
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.39 E-value=1.4e-11 Score=120.27 Aligned_cols=217 Identities=18% Similarity=0.166 Sum_probs=137.0
Q ss_pred CeEEecCCCC-CCeEEEEEEEEeCCCCCCCCCCCCceEeecCC----CCCcccccccccEEEecCCeEEEEEEEeccCCC
Q psy7040 382 PKGKVLDLIE-GNQYEFRVLAVNKGGPGEPSDPTAPHIARAKK----VSPYINRDQLSDIKVRAGSNFEFDINVIGEPIP 456 (716)
Q Consensus 382 ~~~~i~~l~~-~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~----~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~ 456 (716)
..+.|.++.. .+.+.|+|.|.|..|.... .....+...+ ..|.+. ..+....+..|..+.|.|.+.+.|.+
T Consensus 63 ~~L~i~~~~~~~D~G~Y~C~a~n~~g~~~~---~~~l~V~~~~~~p~~~p~i~-~~~~~~~v~~g~~v~l~C~~~g~p~~ 138 (304)
T 2yd9_A 63 AVLRIQPLRTPRDENVYECVAQNSVGEITV---HAKLTVLREDQLPSGFPNID-MGPQLKVVERTRTATMLCAASGNPDP 138 (304)
T ss_dssp EEEEECSCCTTTTCSEEEEEEECSSCEECC---EEEEEEECGGGCCTTCCEEE-ECCCCEEEETTSCEEECCEEECSSCC
T ss_pred eEEEEecccccCCCeEEEEEEECCCCeEEE---EEEEEEeccccCCCCCCeee-cCCccEEEeCCCeEEEEEECccCCCC
Confidence 5788999986 8899999999998876221 1112222211 123333 22355778899999999999999999
Q ss_pred eEEEEeCCeEeccCCc-EEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeE-EEEEEE----EEEEEEeCC---C
Q psy7040 457 TKEWLCNDITIISKDR-FKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGT-AKVTVL----GCSLKWNPP---E 527 (716)
Q Consensus 457 ~~~W~~~~~~~~~~~~-~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s-~~~~v~----~v~l~W~~p---~ 527 (716)
.+.|++++..+..... ..+.... ...|.|.++...|.|.|+|.|.|..|..... ..+.+. ...+.-.+. .
T Consensus 139 ~v~W~k~~~~~~~~~~~~~~~~~~-~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~~~~P~~~~~~~~~~v 217 (304)
T 2yd9_A 139 EITWFKDFLPVDPSASNGRIKQLR-SGALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQNVAPRFSILPMSHEI 217 (304)
T ss_dssp EEEEEETTEECCGGGGTTSEEECT-TSCEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECCCEEEEEEECCCCBCC
T ss_pred eEEEEECCEECcCCCCcceEEeCC-CeEEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEeeccCCcEEecCCceEE
Confidence 9999999988764321 1121222 2389999999999999999999999876532 334432 222222221 1
Q ss_pred CCCCCceeeEEEEEEecCCCceeeeEEEccceeeeecc-ccceeEEEEcCCCCCCeEEEEEEEEcCCCCCccceeeeccC
Q psy7040 528 DDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDN-VDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTD 606 (716)
Q Consensus 528 ~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~-~~~~~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~~~~v~~ 606 (716)
..+......|.+...+ .+.+.|++.+........ ......+.+.++ .+.+.|+|.|.|..|....+..+.|..
T Consensus 218 ~~G~~v~l~C~~~g~p----~p~v~W~~~~~~l~~~~~~~~~~~~L~i~~~--~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 291 (304)
T 2yd9_A 218 MPGGNVNITCVAVGSP----MPYVKWMQGAEDLTPEDDMPVGRNVLELTDV--KDSANYTCVAMSSLGVIEAVAQITVKS 291 (304)
T ss_dssp CTTCCEEEEEEEEEES----CCEEEEEETTEECSCSSSCCBSEEEEEECSC--CSCEEEEEEEEETTEEEEEEEEEC---
T ss_pred cCCCeEEEEEEEeeeC----CCEEEEEECCEECCCcccccCCcEEEEEccc--ccCEEEEEEEEeCCCcEEEEEEEEEec
Confidence 2233334455554443 344999998765532221 122345667666 478999999999999877777666766
Q ss_pred CCC
Q psy7040 607 KPS 609 (716)
Q Consensus 607 ~p~ 609 (716)
++.
T Consensus 292 ~~~ 294 (304)
T 2yd9_A 292 LPK 294 (304)
T ss_dssp ---
T ss_pred Ccc
Confidence 554
No 165
>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.39 E-value=9.8e-12 Score=101.84 Aligned_cols=101 Identities=29% Similarity=0.487 Sum_probs=85.1
Q ss_pred cCCCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecC-CCceEEEeee-cCCCCeEEecCCCCCCeEE
Q psy7040 319 KNPFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKY-SPIWEKCAQT-EGDTPKGKVLDLIEGNQYE 396 (716)
Q Consensus 319 ~~~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~-~~~~~~~~~~-~~~~~~~~i~~l~~~~~Y~ 396 (716)
.....+|.+|.++.+...+.+++.|+|.+ ..+++.+|.+|.|+++... ...|...... ......+.|.+|.+++.|.
T Consensus 12 ~~~~~~P~~P~~~~~~~~~~~sv~l~W~p-~~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~v~~L~p~t~Y~ 90 (121)
T 1x4z_A 12 HGRLSPPEAPDRPTISTASETSVYVTWIP-RGNGGFPIQSFRVEYKKLKKVGDWILATSAIPPSRLSVEITGLEKGISYK 90 (121)
T ss_dssp SSSCCCCCCCCCCEEEECCSSEEEEECCC-CCCTTSCCCEEEEEEEESSSCCCCEEEEEEECTTCCEEEEESCCTTCEEE
T ss_pred cCcCCCCccCCCCEEEEccCCEEEEEEEC-CCCCCCcceEEEEEEEECCCCCceEEeecccCCCcCEEEECCCCCCCEEE
Confidence 34557899999999999999999999996 4556778999999999876 5778766543 5678899999999999999
Q ss_pred EEEEEEeCCCCCCCCCCCCceEee
Q psy7040 397 FRVLAVNKGGPGEPSDPTAPHIAR 420 (716)
Q Consensus 397 ~~v~a~n~~g~~~~s~~~~~~~~~ 420 (716)
|+|+|.|..|.|.++.....++..
T Consensus 91 frV~A~n~~G~s~~S~~~~~v~~~ 114 (121)
T 1x4z_A 91 FRVRALNMLGESEPSAPSRPYVVS 114 (121)
T ss_dssp EEEEEEETTEECCCCCCCCCEECC
T ss_pred EEEEEEcCCCcCCCcCCCCCEEcC
Confidence 999999999999999887666553
No 166
>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.39 E-value=7.5e-13 Score=110.36 Aligned_cols=116 Identities=21% Similarity=0.300 Sum_probs=90.0
Q ss_pred EEEEcCCCCCCCCcccceEEecCCCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCce-EEEee
Q psy7040 298 VRAVNKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIW-EKCAQ 376 (716)
Q Consensus 298 v~a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~-~~~~~ 376 (716)
|.|.|..|.+..+... +.+.+....|.+|.++.+...+.+++.|+|.+|...++ .|.+|.|+|+..+...+ .....
T Consensus 3 V~A~n~~G~g~~S~~~--~~~~t~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~g-~i~~Y~v~~~~~~~~~~~~~~~~ 79 (130)
T 1wfo_A 3 SGSSGRIGDGSPSHPP--ILERTLDDVPGPPMGILFPEVRTTSVRLIWQPPAAPNG-IILAYQITHRLNTTTANTATVEV 79 (130)
T ss_dssp CCCCCCCCCCCCCCCC--SCCCCSCCCCCCCCCCEEEEECSSEEEEECCCCSCCCS-CCCEEEEEEEESSCCCSCCCEEE
T ss_pred eEEEecccCCCCCCCc--EEEEcCCCCCCCCCceEEEecCCCEEEEEEcCCCCCCC-ceEEEEEEEEECCCCCceEEEEE
Confidence 6788999988777642 23334457789999999999999999999999875444 69999999988763321 11123
Q ss_pred ecCCCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCc
Q psy7040 377 TEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAP 416 (716)
Q Consensus 377 ~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~ 416 (716)
.......+.|.+|.+++.|.|+|+|.|..|.|.++....+
T Consensus 80 ~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~ 119 (130)
T 1wfo_A 80 LAPSARQYTATGLKPESVYLFRITAQTRKGWGEAAEALVV 119 (130)
T ss_dssp ECTTCCEEEEESCCSSSEEEEEEEEECSSCEEEEEEEEEE
T ss_pred eCCCceEEEEcCCCCCCEEEEEEEEEeCCcCCCCcccEEE
Confidence 4567889999999999999999999999999887765433
No 167
>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.39 E-value=4.1e-12 Score=104.03 Aligned_cols=92 Identities=25% Similarity=0.430 Sum_probs=77.3
Q ss_pred CCCCCceEE-EEeCCeEEEEecCCCCCCCCccceEEEEEEcCCC-CcEEEecccCCCeEEecCCCCCcEEEEEEEEEecC
Q psy7040 56 DPEGPLEVS-NIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPET-GVWIPVGKTREPEMDVTGLTPGHEYKFRVKALNKE 133 (716)
Q Consensus 56 ~p~~~l~~~-~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~-~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~~~~ 133 (716)
.||..+.+. .++.+++.|+|++|..++|.+|.+|.|+++.... ..|..+.....++++|.+|.+++.|.|||+|.|..
T Consensus 19 ~~P~~~~~~~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~ 98 (120)
T 2crm_A 19 GIPVKPSVKGKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMIYSGATREHLCDRLNPGCFYRLRVYCISDG 98 (120)
T ss_dssp CCCCCCEEEEEEETTEEEEECCCCTTCCSSCCCEEEEEEEESSSSCCCEEEECSSCSEEEECSCCTTSCEEEEEEEEETT
T ss_pred CCCCCCEEeeccCCCEEEEEECCCCcCCCCeeeEEEEEEccCCCCcCCEEEEeccccEEEECCCCCCCEEEEEEEEEcCC
Confidence 344455666 8889999999999987767789999999988766 58888776667899999999999999999999999
Q ss_pred ccCCCccccceEEe
Q psy7040 134 GESEPLETFSSIIA 147 (716)
Q Consensus 134 g~~~~s~~~~~~~~ 147 (716)
|.+.++......+.
T Consensus 99 G~s~~S~~~~~~T~ 112 (120)
T 2crm_A 99 GQSAVSESLLVQTP 112 (120)
T ss_dssp EECCCCCCCCCCCC
T ss_pred ccCCCcccEEEEcC
Confidence 99998876655554
No 168
>1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.37 E-value=8.4e-13 Score=103.55 Aligned_cols=90 Identities=27% Similarity=0.405 Sum_probs=72.8
Q ss_pred CCCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCCcEEEecc---cCCCeEEecCCCCCcEEEEEEEEEe
Q psy7040 55 LDPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETGVWIPVGK---TREPEMDVTGLTPGHEYKFRVKALN 131 (716)
Q Consensus 55 ~~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~---~~~~~~~i~~L~~~~~y~~~v~a~~ 131 (716)
+.||.+|.+.. ..+++.|+|++|.. ++++|.+|.|+|+. +++.|..+.. ...+++++.+|.+++.|.|||.|+|
T Consensus 8 ~~pP~~l~v~~-~~~sv~L~W~pP~~-~~~~I~gY~vey~~-~~~~W~~~~~~~~~~~t~~~v~~L~pg~~Y~FRV~A~n 84 (108)
T 1v5j_A 8 LSPPRGLVAVR-TPRGVLLHWDPPEL-VPKRLDGYVLEGRQ-GSQGWEVLDPAVAGTETELLVPGLIKDVLYEFRLVAFA 84 (108)
T ss_dssp CCCCEEEEEEE-CSSSEEEEEECCSC-CSSCCCBEEEEEEE-TTCCCEEEEEEECSSCCEEECCCCCTTSCEECCBEEEE
T ss_pred CCCCcceEEEE-eCCEEEEEECCCCC-CCCCCcEEEEEEEe-CCCCcEEeeeecCCCcCEEEeCCCCCCCEEEEEEEEEc
Confidence 34555576755 56799999999984 67789999999998 5667876543 3458999999999999999999999
Q ss_pred cCccCCCccccceEEe
Q psy7040 132 KEGESEPLETFSSIIA 147 (716)
Q Consensus 132 ~~g~~~~s~~~~~~~~ 147 (716)
..|.|.+|......+.
T Consensus 85 ~~G~s~pS~~~~v~T~ 100 (108)
T 1v5j_A 85 GSFVSDPSNTANVSTS 100 (108)
T ss_dssp TTEEEEECSCCCCCCS
T ss_pred CCCCcCCCCCEEEEeC
Confidence 9999999987665554
No 169
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.37 E-value=2.3e-11 Score=126.29 Aligned_cols=299 Identities=13% Similarity=0.125 Sum_probs=160.4
Q ss_pred CCCeEEecCCCCCCeEEEEEEEEeCCCCC----------CCCCCCCceEee-cCCCCCcccccccccEEEecCCeEEEEE
Q psy7040 380 DTPKGKVLDLIEGNQYEFRVLAVNKGGPG----------EPSDPTAPHIAR-AKKVSPYINRDQLSDIKVRAGSNFEFDI 448 (716)
Q Consensus 380 ~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~----------~~s~~~~~~~~~-~~~~~P~~~~~~~~~~~~~~g~~~~~~~ 448 (716)
....+.|.++...+...|+|.|.|..|.. ...... ...+. ....+|.+..... ...+..|..+.|.|
T Consensus 77 ~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~-~l~V~~~~~~~P~i~~~~~-~~~~~~g~~v~L~C 154 (457)
T 1hzh_H 77 NTAYMELRSLRSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGT-TVIVSSASTKGPSVFPLAP-SSKSTSGGTAALGC 154 (457)
T ss_dssp TEEEEEECSCCGGGCEEEEEEECCCCCSSCCTTTTCSCCBCCCCE-EEEECSCCCBCCEEEEECC-CSCCCTTCCEEEEE
T ss_pred CEEEEEECCCCcccCEEEEEEEecCCccccccccccccceECCcE-EEEecCCCCCCCeEEecCc-cccccCCCcEEEEE
Confidence 34579999999999999999999987610 111111 12221 2223454432111 12356899999999
Q ss_pred EEecc-CC-CeEEEEeCCeEeccCCcEEEEeCCC----eEEEEECCCCCCCceeEEEEEEcCCCceeeEEEEEEE-----
Q psy7040 449 NVIGE-PI-PTKEWLCNDITIISKDRFKIVNDDK----STKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVL----- 517 (716)
Q Consensus 449 ~v~~~-p~-~~~~W~~~~~~~~~~~~~~~~~~~~----~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v~----- 517 (716)
.+.+. |. +.+.|++++..+...........+. ...|.|.++..+| |.|+|.|.|..+.......+.+.
T Consensus 155 ~~~g~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~v~~~~~~~~ 233 (457)
T 1hzh_H 155 LVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKAEPKSCDKT 233 (457)
T ss_dssp EEESBBSCCCEEEETTTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGGGTEEEEEECCCCCSCSS
T ss_pred EEeEEeCCCeEEEEEeCCEeccceEcCceECCCCCEEEEEEEEecccccCC-ceEEEEEEeCCCCcceeEEecccCCCcc
Confidence 99877 64 7899999986432111111111111 2378999999988 99999999987765444333211
Q ss_pred -------------EEEEEEeCCC-----CCCCCceeeEEEEEEecCCCceeeeEEEccceeeeec----cccceeEEEEc
Q psy7040 518 -------------GCSLKWNPPE-----DDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTID----NVDYFTKITIR 575 (716)
Q Consensus 518 -------------~v~l~W~~p~-----~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~----~~~~~~~~~i~ 575 (716)
...+.-.+|. ..+......|.+...+.......+.|++.+....... .......+.+.
T Consensus 234 ~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~v~L~C~~~g~~p~p~~~~i~W~k~~~~~~~~~~~~~~~~~~g~~~~~ 313 (457)
T 1hzh_H 234 HTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVV 313 (457)
T ss_dssp CSCCSCCCCCCSSSCEEEEECCCHHHHHCTTSCCCEEEEEECCCTTCCCCEEEEEETTEEECCCEEEEEEECTTSCEEEE
T ss_pred cccCCCCCccccCCceEEeECcCchhhcccCCceEEEEEEEcccCCCCceEEEEEeCCccccccccccceecCCCcEEEE
Confidence 1122122332 1133334555554221110012599999875442110 00111223332
Q ss_pred ---CCCCCC---eEEEEEEEEcCCCCCccceeeec-cCCCCCCcccee-------eccceeEEEEEEeeEEEEeeeeccC
Q psy7040 576 ---PLQRSD---TAQYTVTATNSQGKDQVFIEVVV-TDKPSAPEGPIQ-------WLLTLTDVTWEISNYLQELHSSLMP 641 (716)
Q Consensus 576 ---~L~~~~---~y~~~v~a~n~~G~~~~s~~~~v-~~~p~~~~~~~~-------~~~~~v~l~w~i~~y~v~~~~~~~~ 641 (716)
.+...+ .+.|+|.|.|..+.......+.+ ......|. +.. +....+.|.+.+.|+.-.
T Consensus 314 ~~l~i~~~d~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~-v~~~~~~~~~~~~~~~~l~C~~~g~~p~------- 385 (457)
T 1hzh_H 314 SVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQ-VYTLPPSRDELTKNQVSLTCLVKGFYPS------- 385 (457)
T ss_dssp EEECCCHHHHHHTCCEEEEEECTTSSSCEEEEECCCCCCCBCCE-EEEECCCGGGGGSSEEEEEEEEEEEBSS-------
T ss_pred EEEEECHHHccCCCcEEEEEeCCCCCCcceEEEEcccCCCCCCe-EEEECCCccccCCCcEEEEEEEEeEECC-------
Confidence 233444 78999999987665433333322 11222222 211 122335544433332000
Q ss_pred ceeeEEEEeCCeEeeecc--------cc---eeeEEEEccCCCCCcEEEEEEEEcCCCCc
Q psy7040 642 ISLESQYLMNDKRVTIDN--------VD---YFTKITIRPLQRSDTAQYTVTATNSQGKD 690 (716)
Q Consensus 642 ~~~~~~W~~~~~~~~~~~--------~~---~~~~~~i~~l~~~~~y~y~~~a~n~~G~~ 690 (716)
.-.+.|+++|..+.... .+ ....+.|......+.|.|+|.|.|.....
T Consensus 386 -~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~~ 444 (457)
T 1hzh_H 386 -DIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHN 444 (457)
T ss_dssp -CCEEEEEETTEECCCEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSGG
T ss_pred -CCEEEEEECCEECcceeecCceeCCCCCEEEEEEEEEChHHccCCCeEEEEEEECCCCC
Confidence 00689999999875431 11 11345555555578999999999976544
No 170
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.37 E-value=6.6e-12 Score=117.12 Aligned_cols=185 Identities=19% Similarity=0.283 Sum_probs=116.0
Q ss_pred ccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEE-EEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEE
Q psy7040 434 SDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFK-IVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTA 512 (716)
Q Consensus 434 ~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~-~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~ 512 (716)
....+.+|+.+.|.|.+.+.|.+.+.|++++..+.....+. .........|.|.++...|.|.|+|.|.|..|......
T Consensus 27 ~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~ 106 (231)
T 3ojm_B 27 RLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTY 106 (231)
T ss_dssp SCEEEETTSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred eeEEEccCCCEEEEEecccCCCCeEEEEECCccccccccccceeeecCcceEEEecCCcccCEEEEEEEecccCcccccE
Confidence 56789999999999999999999999999998876443321 11222345899999999999999999999887655444
Q ss_pred EEEEEEEEEEEeCCCCCCCCceeeEEEEEEecCCCceeeeEEEccceeeeeccccceeEEEEcCCCCCCeEEEEEEEEcC
Q psy7040 513 KVTVLGCSLKWNPPEDDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDNVDYFTKITIRPLQRSDTAQYTVTATNS 592 (716)
Q Consensus 513 ~~~v~~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~ 592 (716)
.+.+. ..+.. .+. . ..... .... +..|....+.|.+..
T Consensus 107 ~l~V~------~~~~~---~p~---~----------------~~~~~----------~~~~---~~~g~~~~l~C~~~~- 144 (231)
T 3ojm_B 107 HLDVV------ERSRH---RPI---L----------------QAGLP----------ANAS---TVVGGDVEFVCKVYS- 144 (231)
T ss_dssp EEEEE------CCCCC---CCE---E----------------CTTCS----------CCEE---EETTCCEEEECCEEC-
T ss_pred EEEEE------cCCCC---CCc---e----------------eeccC----------CceE---EEeCCcEEEEEEEec-
Confidence 33332 00100 000 0 00000 0000 112333444443321
Q ss_pred CCCCccceeeeccCCCCCCccceeeccceeEEEEEEeeEEEEeeeeccCceeeEEEEe----CCeEeeec----------
Q psy7040 593 QGKDQVFIEVVVTDKPSAPEGPIQWLLTLTDVTWEISNYLQELHSSLMPISLESQYLM----NDKRVTID---------- 658 (716)
Q Consensus 593 ~G~~~~s~~~~v~~~p~~~~~~~~~~~~~v~l~w~i~~y~v~~~~~~~~~~~~~~W~~----~~~~~~~~---------- 658 (716)
. |. | .+.|++ +|..+..+
T Consensus 145 --~------------p~-p---------------------------------~v~W~~~~~~~g~~~~~~~~~~~~~~~~ 176 (231)
T 3ojm_B 145 --D------------AQ-P---------------------------------HIQWIKHVEKNGSKYGPDGLPYLKVLKH 176 (231)
T ss_dssp --S------------SC-C---------------------------------EEEEEEECCBTTBSBCTTSCBCEEEEEE
T ss_pred --C------------CC-C---------------------------------EEEEEECCCCCCccccCCCcceEeEecc
Confidence 0 00 0 456776 55544322
Q ss_pred ---ccceeeEEEEccCCCCCcEEEEEEEEcCCCCceeeEEEEEecCCCCCCCC
Q psy7040 659 ---NVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTDKPSAPEGP 708 (716)
Q Consensus 659 ---~~~~~~~~~i~~l~~~~~y~y~~~a~n~~G~~~~s~~l~v~~~p~~p~~p 708 (716)
.......|.|.++...|.|.|+|.|.|..|....+..|.|..+|.+|...
T Consensus 177 ~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~p~~~ 229 (231)
T 3ojm_B 177 SGINSSNAEVLALFNVTEADAGEYICKVSNYIGQANQSAWLTVLPKQQAPGRE 229 (231)
T ss_dssp CSTTCSCTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC------
T ss_pred cccccCCccEEEEecCCHHHCeEEEEEEEeccceEeeEEEEEEecCCCCCccc
Confidence 11122569999999999999999999999999999999999999988653
No 171
>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.36 E-value=7.5e-12 Score=100.71 Aligned_cols=96 Identities=32% Similarity=0.519 Sum_probs=81.9
Q ss_pred cCCCCCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCCCCCeEEccccCcccceEEEcCCCCCCeEEEEEEE
Q psy7040 221 DKPSPPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEATGRWTPAGETEGPVTGLEVEGLIPNHKYKFRVRA 300 (716)
Q Consensus 221 ~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a 300 (716)
.+|.+|.+ +.+.....+++.|+|.+|..+++.++.+|.|+++......|..+.........+.+.+|.+++.|.|+|+|
T Consensus 7 ~~P~~P~~-l~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A 85 (111)
T 1x5y_A 7 GPTSAPQH-LTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANKEPVERCGFTVKDLPTGARILFRVVG 85 (111)
T ss_dssp SCCCCCEE-EEEEEECSSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEESSSSCBSSSEEEEECCCTTCCEEEEEEE
T ss_pred CCCcCCCC-CEEEeccCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEccccCCcccEEEECCCCCCCEEEEEEEE
Confidence 46777776 78888899999999999887777789999999998888889887655456789999999999999999999
Q ss_pred EcCCCCCCCCcccceEE
Q psy7040 301 VNKQGKSEPLTTTASIE 317 (716)
Q Consensus 301 ~n~~g~~~~~~~~~~~~ 317 (716)
.|..|.+.++..+..++
T Consensus 86 ~n~~G~s~~S~~~~~v~ 102 (111)
T 1x5y_A 86 VNIAGRSEPATLLQPVT 102 (111)
T ss_dssp EETTEECCCCCCSSCBC
T ss_pred EcCCcCCCCccCCCCEE
Confidence 99999988887764444
No 172
>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.36 E-value=6.3e-12 Score=99.95 Aligned_cols=92 Identities=21% Similarity=0.265 Sum_probs=74.3
Q ss_pred CCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCCcEEEecccCCCeEEecCCCCCcEEEEEEEEEecCcc
Q psy7040 56 DPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETGVWIPVGKTREPEMDVTGLTPGHEYKFRVKALNKEGE 135 (716)
Q Consensus 56 ~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~~~~g~ 135 (716)
.+|..+++..++.+++.|+|++|.. +|.+|.+|+|+|+.... .|..+.....+++.|.+|.+++.|.|+|+|.|..|.
T Consensus 9 ~~P~~~~~~~~s~~sv~l~W~~p~~-~g~~i~~Y~v~~~~~~~-~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~ 86 (106)
T 1x4x_A 9 DQCKPPQVTCRSATCAQVNWEVPLS-NGTDVTEYRLEWGGVEG-SMQICYCGPGLSYEIKGLSPATTYYCRVQALSVVGA 86 (106)
T ss_dssp CCCCCCCCEEEETTEEEEECCCCSC-SSSCCCEEEEEEESSTT-SCCEEEEESCSEEEEESCCSSCEEEEEEEEECSSCC
T ss_pred CCCCCCEEEEcCCCEEEEEEcCCCC-CCCcceEEEEEEEcCCC-ceEEEEeCCcceEEEcCCCCCCEEEEEEEEEcCCcC
Confidence 4556688889999999999999875 66679999999987653 344444455689999999999999999999999999
Q ss_pred CCCccccceEEecC
Q psy7040 136 SEPLETFSSIIARD 149 (716)
Q Consensus 136 ~~~s~~~~~~~~~~ 149 (716)
+.++......+...
T Consensus 87 g~~S~~v~~~T~~~ 100 (106)
T 1x4x_A 87 GPFSEVVACVTPPS 100 (106)
T ss_dssp CCBCCCEEEECCCC
T ss_pred CCCcCCEEEECCCC
Confidence 98887766655543
No 173
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.36 E-value=3.6e-11 Score=110.33 Aligned_cols=187 Identities=16% Similarity=0.186 Sum_probs=117.6
Q ss_pred cCCeEEEEEEEecc-CCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEEEEEEEE
Q psy7040 440 AGSNFEFDINVIGE-PIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVLG 518 (716)
Q Consensus 440 ~g~~~~~~~~v~~~-p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v~~ 518 (716)
.++.+.|.|.+.+. |.+.+.|++++..+....++.+...+....|.|.++...|.|.|+|.|.|..|.......+.+..
T Consensus 16 ~~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~v~~ 95 (212)
T 2r15_A 16 TAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQA 95 (212)
T ss_dssp CSSEEEEEEEBSSCCSSCEEEEEETTEECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHH
T ss_pred cCceEEEEEEEeccCCCceEEEEECCEEccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEEEee
Confidence 56778999999885 58899999999999888888888888888899999999999999999999777554333222110
Q ss_pred EEEEEeCCCCCCCCceeeEEE-EEEecCCCceeeeEEEccceeeeeccccceeEEEEcCCCCCCeEEEEEEEEcCCCCCc
Q psy7040 519 CSLKWNPPEDDGGAPIEYYMV-EKMETDTGKVLIKWIRTNDKRVTIDNVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQ 597 (716)
Q Consensus 519 v~l~W~~p~~~~~~~i~~y~v-~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~G~~~ 597 (716)
+.... ........ ....... ........ ... .+..|....+.|.+.. .
T Consensus 96 ----~~~~~----~~~~~~~~~~~~~~~~----p~~~~~~~-----------~~~---~v~~g~~~~l~C~~~g---~-- 144 (212)
T 2r15_A 96 ----YDEAY----AEFQRLKQAAIAEKNR----ARVLGGLP-----------DVV---TIQEGKALNLTCNVWG---D-- 144 (212)
T ss_dssp ----HHHHH----HHHHHHHHHHHHHHHS----CEEEEBCC-----------SEE---EEETTCCEEEEEEEEC---S--
T ss_pred ----ccchh----hhccccCcccccccCC----CcccccCC-----------CcE---EEccCCeEEEEEEEcC---C--
Confidence 00000 00000000 0000000 00000000 000 0122333444444331 0
Q ss_pred cceeeeccCCCCCCccceeeccceeEEEEEEeeEEEEeeeeccCceeeEEEEeCCeEeeeccc-------ceeeEEEEcc
Q psy7040 598 VFIEVVVTDKPSAPEGPIQWLLTLTDVTWEISNYLQELHSSLMPISLESQYLMNDKRVTIDNV-------DYFTKITIRP 670 (716)
Q Consensus 598 ~s~~~~v~~~p~~~~~~~~~~~~~v~l~w~i~~y~v~~~~~~~~~~~~~~W~~~~~~~~~~~~-------~~~~~~~i~~ 670 (716)
| +. .+.|++++..+..... +....|.|.+
T Consensus 145 ----------p--~p--------------------------------~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~ 180 (212)
T 2r15_A 145 ----------P--PP--------------------------------EVSWLKNEKALAQTDHCNLKFEAGRTAYFTING 180 (212)
T ss_dssp ----------S--CC--------------------------------EEEEEETTEEECCCSSEEEEEETTTEEEEEESS
T ss_pred ----------C--Cc--------------------------------eEEEEECCeECccCCCEEEEEcCCCEEEEEEcC
Confidence 0 00 5789999988776411 2235899999
Q ss_pred CCCCCcEEEEEEEEcCCCCceeeEEEEEecC
Q psy7040 671 LQRSDTAQYTVTATNSQGKDQVFIEVVVTDK 701 (716)
Q Consensus 671 l~~~~~y~y~~~a~n~~G~~~~s~~l~v~~~ 701 (716)
+...|.|.|+|.|.|..|....+..|.|..|
T Consensus 181 ~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~P 211 (212)
T 2r15_A 181 VSTADSGKYGLVVKNKYGSETSDFTVSVFIP 211 (212)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred cchHHCeEEEEEEEcCCCcEEEEEEEEEEcc
Confidence 9999999999999999999999999998753
No 174
>2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1
Probab=99.36 E-value=2.1e-12 Score=103.72 Aligned_cols=91 Identities=23% Similarity=0.459 Sum_probs=68.7
Q ss_pred CCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcC-CCCcEEEeccc-------------CCCeEEecCCCCCc
Q psy7040 56 DPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDP-ETGVWIPVGKT-------------REPEMDVTGLTPGH 121 (716)
Q Consensus 56 ~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~-~~~~~~~~~~~-------------~~~~~~i~~L~~~~ 121 (716)
.||.+..+..++.+++.|+|.+|.++ |.+|.+|.|+++.. ....|..+... ..++++|.+|.|++
T Consensus 4 ~pP~~P~v~~~~~~sv~L~W~~P~~~-G~pI~~Y~Ve~r~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t 82 (115)
T 2ic2_A 4 YPPTPPNVTRLSDESVMLRWMVPRND-GLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQH 82 (115)
T ss_dssp CCCCCCEEEECC---EEEEEEEECCS-SCCEEEEEEEEEECC---CCEEEEEEEECCSCSCSSSSEEEEEEEECSCCSSE
T ss_pred CCCCcCEeEEEeCCEEEEEEcCCCCC-CCCCceEEEEEEECCCCCCceECcccccccccccccccCceeEEEeCCCCCCC
Confidence 34555568899999999999999855 48899999999987 45778766532 12578999999999
Q ss_pred EEEEEEEEEecCccCCCccccceEEe
Q psy7040 122 EYKFRVKALNKEGESEPLETFSSIIA 147 (716)
Q Consensus 122 ~y~~~v~a~~~~g~~~~s~~~~~~~~ 147 (716)
.|.|||+|.|..|.+.+|.....+..
T Consensus 83 ~Y~FRV~A~N~~G~~~pS~~S~~~~~ 108 (115)
T 2ic2_A 83 TYRFRILAVYSNNDNKESNTSAKFYL 108 (115)
T ss_dssp EEEEEEEEEETTSCEEECCCCCCEEE
T ss_pred EEEEEEEEEeCCCCCCCCCCCCCEEe
Confidence 99999999999998888776665544
No 175
>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1
Probab=99.35 E-value=2.1e-12 Score=102.61 Aligned_cols=95 Identities=21% Similarity=0.408 Sum_probs=77.4
Q ss_pred CCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEe---eecCCCCeEEecCCCCCCeEEEE
Q psy7040 322 FNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCA---QTEGDTPKGKVLDLIEGNQYEFR 398 (716)
Q Consensus 322 ~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~---~~~~~~~~~~i~~l~~~~~Y~~~ 398 (716)
..+|.+|.++.+...+.+ +.|+|.+|..++|.+|.+|.|+|+..+...|.... ........+.|.+|.|++.|.|+
T Consensus 4 ~~~P~~P~~~~~~~~~~~-v~l~W~~P~~~~G~pi~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~r 82 (105)
T 2haz_A 4 MDTPSSPSIDQVEPYSST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVR 82 (105)
T ss_dssp CCCCCCCEEEEEEECSSC-EEEEEECCSCCTTSCCCEEEEEEEETTCCCCEEEEEEHHHHHHHSEEEECSCCTTCEEEEE
T ss_pred CCCCcCCCCCEEEEcCCc-EEEEEcCCcccCCccccEEEEEEEECCCCCCccceEEccccCCccEEEECCCCCCCEEEEE
Confidence 367888888888888877 99999999877776799999999988766674322 12235688999999999999999
Q ss_pred EEEEeCCCCCCCCCCCCce
Q psy7040 399 VLAVNKGGPGEPSDPTAPH 417 (716)
Q Consensus 399 v~a~n~~g~~~~s~~~~~~ 417 (716)
|+|.|..|.|.+|....+.
T Consensus 83 V~A~n~~G~g~~S~~~~~~ 101 (105)
T 2haz_A 83 LAALNGKGLGEISAASEFK 101 (105)
T ss_dssp EEEEETTEECCCCCCEEEE
T ss_pred EEEEcCCccCCCcCCEeeE
Confidence 9999999999988765443
No 176
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.35 E-value=5e-11 Score=107.05 Aligned_cols=74 Identities=24% Similarity=0.503 Sum_probs=65.7
Q ss_pred ccEEEecCCeEEEEEEEeccCCCeEEEEe-CCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCce
Q psy7040 434 SDIKVRAGSNFEFDINVIGEPIPTKEWLC-NDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTD 508 (716)
Q Consensus 434 ~~~~~~~g~~~~~~~~v~~~p~~~~~W~~-~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~ 508 (716)
..+.+..|+.+.|.|.+.+.|. .+.|++ ++..+....++.+...+....|.|.++...|.|.|+|.|.|..|..
T Consensus 10 ~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~ 84 (189)
T 2v44_A 10 SKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQT 84 (189)
T ss_dssp SEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCE
T ss_pred CceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCCCCc
Confidence 4578999999999999999887 999999 7777777788888887778899999999999999999999988764
No 177
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.35 E-value=8.7e-11 Score=105.54 Aligned_cols=164 Identities=20% Similarity=0.271 Sum_probs=111.6
Q ss_pred cEEEec-CCeEEEEEEEeccCC--CeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeE
Q psy7040 435 DIKVRA-GSNFEFDINVIGEPI--PTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGT 511 (716)
Q Consensus 435 ~~~~~~-g~~~~~~~~v~~~p~--~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s 511 (716)
...+.. |+.+.|.|.+.+.|. +.+.|++++..+....... ....|.|.++...|.|.|+|.|.|. |....+
T Consensus 11 ~~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~-----~~~~L~i~~~~~~d~G~Y~C~~~n~-~~~~~~ 84 (190)
T 2wv3_A 11 EVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNA-----SNMEYRINKPRAEDSGEYHCVYHFV-SAPKAN 84 (190)
T ss_dssp CEECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCCBCC-----SEEEEEESSCCGGGCEEEEEEEEET-TEEEEE
T ss_pred eEEEccCCceEEEEEEeccCCCCceEEEEEECCEECcccceEe-----ccEEEEEecCCcccCEEEEEEEEeC-Cccccc
Confidence 455666 999999999999887 7899999999886544322 4578999999999999999999998 766555
Q ss_pred EEEEEEEEEEEEeCCCCCCCCceeeEEEEEEecCCCceeeeEEEccceeeeeccccceeEEEEcCCCCCCeEEEEEEEEc
Q psy7040 512 AKVTVLGCSLKWNPPEDDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDNVDYFTKITIRPLQRSDTAQYTVTATN 591 (716)
Q Consensus 512 ~~~~v~~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n 591 (716)
..+.+. .+|. +. .. . .... +..|..-.+.|.+..
T Consensus 85 ~~l~V~------~~p~------~~-----~~--~------------------------~~~~---~~~g~~v~l~C~~~g 118 (190)
T 2wv3_A 85 ATIEVK------AAPD------IT-----GH--K------------------------RSEN---KNEGQDAMMYCKSVG 118 (190)
T ss_dssp EEEEEE------CCCE------EE-----EE--C------------------------SEEE---EETTSCEEEEEEEEC
T ss_pred EEEEEe------cCCc------cc-----cc--C------------------------Ccce---eeCCCcEEEEEEeCc
Confidence 544443 0110 00 00 0 0000 224455666676621
Q ss_pred CCCCCccceeeeccCCCCCCccceeeccceeEEEEEEeeEEEEeeeeccCceeeEEEEe--CCeEeeec---------cc
Q psy7040 592 SQGKDQVFIEVVVTDKPSAPEGPIQWLLTLTDVTWEISNYLQELHSSLMPISLESQYLM--NDKRVTID---------NV 660 (716)
Q Consensus 592 ~~G~~~~s~~~~v~~~p~~~~~~~~~~~~~v~l~w~i~~y~v~~~~~~~~~~~~~~W~~--~~~~~~~~---------~~ 660 (716)
. |. | .+.|++ +|..+... ..
T Consensus 119 ---~------------p~-p---------------------------------~i~W~~~~~g~~~~~~~~~~~~~~~~~ 149 (190)
T 2wv3_A 119 ---Y------------PH-P---------------------------------EWMWRKKENGVFEEISNSSGRFFIINK 149 (190)
T ss_dssp ---S------------SC-C---------------------------------EEEEEEEETTEEEECCCTTSCEEEEEC
T ss_pred ---c------------CC-C---------------------------------ceEEEEcCCCceeeeecCCCeEEEecC
Confidence 1 00 0 356676 55554321 11
Q ss_pred ceeeEEEEccCC-CCCcEEEEEEEEcCCCCceeeEEEEEe
Q psy7040 661 DYFTKITIRPLQ-RSDTAQYTVTATNSQGKDQVFIEVVVT 699 (716)
Q Consensus 661 ~~~~~~~i~~l~-~~~~y~y~~~a~n~~G~~~~s~~l~v~ 699 (716)
.....|.|.++. .+|.|.|+|.|.|..|....+..|.|.
T Consensus 150 ~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 150 ENYTELNIVNLQITEDPGEYECNATNSIGSASVSTVLRVR 189 (190)
T ss_dssp SSEEEEEECSCCTTTSCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred CCeeEEEEEeccccCCCEEEEEEEEecCCcceeEEEEEEE
Confidence 122479999999 799999999999999999988888875
No 178
>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.34 E-value=9.1e-12 Score=101.62 Aligned_cols=94 Identities=24% Similarity=0.374 Sum_probs=79.3
Q ss_pred CCCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCC-CcEEEecccCCCeEEecCCCCCcEEEEEEEEEecC
Q psy7040 55 LDPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPET-GVWIPVGKTREPEMDVTGLTPGHEYKFRVKALNKE 133 (716)
Q Consensus 55 ~~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~-~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~~~~ 133 (716)
+.+|..+.+..++.+++.|+|++|. +++.+|.+|.|+|+.... ..|..+.....+.++|.+|.+++.|.|+|+|.|..
T Consensus 18 P~~P~~~~~~~~~~~sv~l~W~~p~-~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~ 96 (118)
T 1x3d_A 18 PDIPNPPRIANRTKNSLTLQWKAPS-DNGSKIQNFVLEWDEGKGNGEFCQCYMGSQKQFKITKLSPAMGCKFRLSARNDY 96 (118)
T ss_dssp CCCCCCCEEEEEETTEEEEECCCCC-CCSSCEEEEEEEECTTTSSSCCEEEEEESCSEEEEESCCTTCEEEEECCEEESS
T ss_pred CcCCCCcEEeccCCCEEEEEECCCC-CCCCcceEEEEEEecCCCCCCeEEeeccCCcEEEeCCCCCCCEEEEEEEEEECC
Confidence 3456668899999999999999987 456779999999987765 67877766667899999999999999999999999
Q ss_pred ccCCCccccceEEecC
Q psy7040 134 GESEPLETFSSIIARD 149 (716)
Q Consensus 134 g~~~~s~~~~~~~~~~ 149 (716)
|.+.++......+...
T Consensus 97 G~s~~S~~~~~~T~~~ 112 (118)
T 1x3d_A 97 GTSGFSEEVLYYTSGC 112 (118)
T ss_dssp CBCCCCCCEEEECSCC
T ss_pred CCCCCccCEEEEcCCC
Confidence 9999988777665443
No 179
>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.34 E-value=7.5e-12 Score=102.87 Aligned_cols=99 Identities=27% Similarity=0.369 Sum_probs=82.1
Q ss_pred CCCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEee---cCCCceEEEeee--cCCCCeEEecCCCCCCe
Q psy7040 320 NPFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKE---KYSPIWEKCAQT--EGDTPKGKVLDLIEGNQ 394 (716)
Q Consensus 320 ~~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~---~~~~~~~~~~~~--~~~~~~~~i~~l~~~~~ 394 (716)
.+..+|.+|.++.+...+.+++.|+|.+|. +++.+|.+|.|+++. .....|...... ......+.+.+|.+++.
T Consensus 13 ~~~~~P~~P~~l~~~~~~~~sv~l~W~p~~-~~~~~i~~Y~v~~~~~~~~~~~~w~~~~~~~~~~~~~~~~v~~L~p~t~ 91 (124)
T 1wis_A 13 VPPELPGPPTNLGISNIGPRSVTLQFRPGY-DGKTSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDARSMEVPDLNPFTC 91 (124)
T ss_dssp CCCCCCCCCEEEEEESCCSSCEEEEEECCC-CCSSCCSEEEEEECBSCCSTTSCCEEEEEEESCTTCSEEEECSCCTTSE
T ss_pred CCCCCCccCCCCEEEEecCCEEEEEEECCC-CCCCcccEEEEEEEECCCCCCCCCeEeeeEccCCCceEEEeCCCCCCCE
Confidence 345788999999999999999999998765 566789999999987 345678765543 56778999999999999
Q ss_pred EEEEEEEEeCCCCCCCCCCCCceEe
Q psy7040 395 YEFRVLAVNKGGPGEPSDPTAPHIA 419 (716)
Q Consensus 395 Y~~~v~a~n~~g~~~~s~~~~~~~~ 419 (716)
|.|+|+|.|..|.|.++.....++.
T Consensus 92 Y~frV~A~N~~G~s~~S~~~~~~~T 116 (124)
T 1wis_A 92 YSFRMRQVNIVGTSPPSQPSRKIQT 116 (124)
T ss_dssp ECCCCEEECSSCBCCCCCCCCCEEC
T ss_pred EEEEEEEEECCccCCCcCCccceEc
Confidence 9999999999999999887654443
No 180
>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.34 E-value=6.7e-12 Score=102.88 Aligned_cols=98 Identities=22% Similarity=0.302 Sum_probs=81.7
Q ss_pred CCCCCCCCCCCcEEEeeeCCeEEEEecCCC-CCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEE
Q psy7040 320 NPFNQPGKPGTPEIKDFDTDFVELAWTPPE-QNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFR 398 (716)
Q Consensus 320 ~~~~~p~~p~~~~~~~~~~~~i~l~W~~p~-~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~ 398 (716)
+...+|.+|.++.+.....+++.|+|.+|. ..++ .|.+|.|+|+..+...|............+.|.+|.+++.|.|+
T Consensus 13 t~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~~g-~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~ 91 (120)
T 1x5f_A 13 TTGPLPSAPRDVVASLVSTRFIKLTWRTPASDPHG-DNLTYSVFYTKEGIARERVENTSHPGEMQVTIQNLMPATVYIFR 91 (120)
T ss_dssp CCCCCCCCCEEEEEEEECSSCEEEEEECCSSCSSC-CSSEEEEEEEETTCCCCEEEECSSTTCSEEEECSCCTTCEEEEE
T ss_pred CCCCCCCCCCCcEEEecCCCEEEEEECCCCCCCCC-cEEEEEEEEEECCCCCceEEEeccCCccEEEeCCCCCCCEEEEE
Confidence 344778999999999999999999999987 4444 89999999998876666665555667899999999999999999
Q ss_pred EEEEeCCCCCCCCCCCCceE
Q psy7040 399 VLAVNKGGPGEPSDPTAPHI 418 (716)
Q Consensus 399 v~a~n~~g~~~~s~~~~~~~ 418 (716)
|+|.|..|.|.++....+.+
T Consensus 92 V~A~n~~G~g~~S~~~~~~T 111 (120)
T 1x5f_A 92 VMAQNKHGSGESSAPLRVET 111 (120)
T ss_dssp EEEECSSCEEEECCCEEEEC
T ss_pred EEEECCCccCCCCCCEEEEe
Confidence 99999999988877654443
No 181
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.34 E-value=7.8e-11 Score=106.11 Aligned_cols=176 Identities=20% Similarity=0.290 Sum_probs=115.5
Q ss_pred CCcccccccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEecc-CCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEc
Q psy7040 425 SPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIIS-KDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKN 503 (716)
Q Consensus 425 ~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~-~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n 503 (716)
+|.+. ..+..+.+..|+.+.|.|.+.+.|.+.+.|++++..+.. ..++.+... ...|.|.++...|.|.|+|.+.|
T Consensus 7 ~P~i~-~~~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~--~~~L~i~~~~~~d~G~Y~C~~~~ 83 (192)
T 2iep_A 7 APVIT-TPLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIREN--GQLLTILSVEDSDDGIYCCTANN 83 (192)
T ss_dssp EEEES-SCCCEEEEETTSCEEEECCEEEESCCEEEEEETTEECCTTCTTEEEEGG--GTEEEESSCCGGGCEEEEEEEEC
T ss_pred Cceee-cCccceeeeCCCcEEEEeeCCCCCCCeEEEEECCEEccccCccEEEcCC--ccEEEEcCCCcccCeEEEEEEEc
Confidence 44443 334567899999999999999999999999999988764 345555433 34799999999999999999998
Q ss_pred CCCcee-eEEEEEEEEEEEEEeCCCCCCCCceeeEEEEEEecCCCceeeeEEEccceeeeeccccceeEEEEcCCCCCCe
Q psy7040 504 SWGTDK-GTAKVTVLGCSLKWNPPEDDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDNVDYFTKITIRPLQRSDT 582 (716)
Q Consensus 504 ~~g~~~-~s~~~~v~~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~i~~L~~~~~ 582 (716)
..|... ....+.+.. +|. + .... .... +..|..
T Consensus 84 ~~~~~~~~~~~l~v~~------~p~-----------~--~~~~------------------------~~~~---~~~g~~ 117 (192)
T 2iep_A 84 GVGGAVESCGALQVKM------KPK-----------I--TRPP------------------------INVK---IIEGLK 117 (192)
T ss_dssp SSSCCEEEEEEEEEEE------EEE-----------E--EECC------------------------CCEE---EETTSC
T ss_pred CCCceeEeEEEEEEEe------CCc-----------c--ccCC------------------------cceE---EeCCCc
Confidence 876532 222222110 000 0 0000 0000 011222
Q ss_pred EEEEEEEEcCCCCCccceeeeccCCCCCCccceeeccceeEEEEEEeeEEEEeeeeccCcee----eEEEEeCCeEeeec
Q psy7040 583 AQYTVTATNSQGKDQVFIEVVVTDKPSAPEGPIQWLLTLTDVTWEISNYLQELHSSLMPISL----ESQYLMNDKRVTID 658 (716)
Q Consensus 583 y~~~v~a~n~~G~~~~s~~~~v~~~p~~~~~~~~~~~~~v~l~w~i~~y~v~~~~~~~~~~~----~~~W~~~~~~~~~~ 658 (716)
..+.|. +.| .+.|++++..+...
T Consensus 118 ~~l~C~-----------------------------------------------------~~g~p~~~v~W~~~~~~~~~~ 144 (192)
T 2iep_A 118 AVLPCT-----------------------------------------------------TMGNPKPSVSWIKGDSALREN 144 (192)
T ss_dssp EEECCE-----------------------------------------------------EEEESCCEEEEEETTEECCCC
T ss_pred EEEEEE-----------------------------------------------------EeccCCceEEEEeCCEEccCC
Confidence 223332 222 57899998877654
Q ss_pred c---cceeeEEEEccCCCCCcEEEEEEEEcCCCCc-eeeEEEEEecCC
Q psy7040 659 N---VDYFTKITIRPLQRSDTAQYTVTATNSQGKD-QVFIEVVVTDKP 702 (716)
Q Consensus 659 ~---~~~~~~~~i~~l~~~~~y~y~~~a~n~~G~~-~~s~~l~v~~~p 702 (716)
. ......|.|.++...|.|.|+|.|.|..|.. +....|.|..+|
T Consensus 145 ~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~pp 192 (192)
T 2iep_A 145 SRIAVLESGSLRIHNVQKEDAGQYRCVAKNSLGTAYSKLVKLEVEVFA 192 (192)
T ss_dssp SSEEECTTSCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred CcEEEecCCcEEEecCChhhCEEEEEEEEcCCCcEEEEEEEEEEEeCC
Confidence 1 1122479999999999999999999999988 557889998865
No 182
>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.34 E-value=1.2e-11 Score=98.36 Aligned_cols=95 Identities=19% Similarity=0.231 Sum_probs=76.5
Q ss_pred CCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEE
Q psy7040 321 PFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVL 400 (716)
Q Consensus 321 ~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~ 400 (716)
...+|.+|.++.+...+.+++.|+|.+|.. +|..|.+|.|+++... ..|... ......++.|.+|.+++.|.|+|+
T Consensus 4 ~~~~P~~P~~~~~~~~s~~sv~l~W~~p~~-~g~~i~~Y~v~~~~~~-~~~~~~--~~~~~~~~~v~~L~p~t~Y~frV~ 79 (106)
T 1x4x_A 4 GSSGPDQCKPPQVTCRSATCAQVNWEVPLS-NGTDVTEYRLEWGGVE-GSMQIC--YCGPGLSYEIKGLSPATTYYCRVQ 79 (106)
T ss_dssp SCCSCCCCCCCCCEEEETTEEEEECCCCSC-SSSCCCEEEEEEESST-TSCCEE--EEESCSEEEEESCCSSCEEEEEEE
T ss_pred CCCCcCCCCCCEEEEcCCCEEEEEEcCCCC-CCCcceEEEEEEEcCC-CceEEE--EeCCcceEEEcCCCCCCEEEEEEE
Confidence 346788999999999999999999999876 5668999999998765 234322 234567899999999999999999
Q ss_pred EEeCCCCCCCCCCCCceEe
Q psy7040 401 AVNKGGPGEPSDPTAPHIA 419 (716)
Q Consensus 401 a~n~~g~~~~s~~~~~~~~ 419 (716)
|.|..|.|.++......+.
T Consensus 80 A~n~~G~g~~S~~v~~~T~ 98 (106)
T 1x4x_A 80 ALSVVGAGPFSEVVACVTP 98 (106)
T ss_dssp EECSSCCCCBCCCEEEECC
T ss_pred EEcCCcCCCCcCCEEEECC
Confidence 9999999988776544443
No 183
>2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens}
Probab=99.33 E-value=2.7e-12 Score=104.92 Aligned_cols=105 Identities=31% Similarity=0.555 Sum_probs=90.6
Q ss_pred CCCceeEEEEEEecCCCCCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCCCCCeEEccccCcccceEEEcC
Q psy7040 208 NGKDSVEVEVIVLDKPSPPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEATGRWTPAGETEGPVTGLEVEG 287 (716)
Q Consensus 208 ~g~~~~~~~~~v~~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~ 287 (716)
.|..+..+.+.+.++|.+|.+ +.+.....+++.|+|.+|..+++.++.+|.|+++......|..+... .....+.+.+
T Consensus 3 ~G~~~~~~~v~~~~~P~~P~~-l~~~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~w~~~~~~-~~~~~~~v~~ 80 (120)
T 2yux_A 3 SGSSGASIDIQIIDRPGPPQI-VKIEDVWGENVALTWTPPKDDGNAAITGYTIQKADKKSMEWFTVIEH-YHRTSATITE 80 (120)
T ss_dssp CCCCCCCCCCCCCCCCCCCSC-EEEEEEETTEEEEEECCCSCCCSSCCCCCCEEEEETTTCCCEEEESS-CCSSCCEECC
T ss_pred CCcccEEEEEEeecCCCcCCC-CEEEEecCCEEEEEEcCCCcCCCCCceEEEEEEEECCCCceEEeeec-CCcCEEEECC
Confidence 466777778888899999998 89989999999999999887777889999999998877888876532 4578899999
Q ss_pred CCCCCeEEEEEEEEcCCCCCCCCcccc
Q psy7040 288 LIPNHKYKFRVRAVNKQGKSEPLTTTA 314 (716)
Q Consensus 288 L~p~~~y~~~v~a~n~~g~~~~~~~~~ 314 (716)
|.|++.|.|+|+|.|..|.+.++..+.
T Consensus 81 L~p~t~Y~frV~A~n~~G~s~~S~~s~ 107 (120)
T 2yux_A 81 LVIGNEYYFRVFSENMCGLSEDATMTK 107 (120)
T ss_dssp CCSSEEEEEEECCCSSSCSCSSCEECS
T ss_pred CCCCCEEEEEEEEeeCCcCCCCccCcC
Confidence 999999999999999999998877553
No 184
>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens}
Probab=99.33 E-value=5e-12 Score=103.46 Aligned_cols=93 Identities=22% Similarity=0.401 Sum_probs=76.3
Q ss_pred CCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEe---eecCCCCeEEecCCCCCCeEEEEE
Q psy7040 323 NQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCA---QTEGDTPKGKVLDLIEGNQYEFRV 399 (716)
Q Consensus 323 ~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~---~~~~~~~~~~i~~l~~~~~Y~~~v 399 (716)
..|.+|.++.+...+.+ +.|+|.+|..++|.+|.+|.|+|+..+...|.... ........++|.+|.+++.|.|+|
T Consensus 6 ~~P~~P~~~~~~~~~~t-v~l~W~~P~~~~G~pI~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~rV 84 (122)
T 2e3v_A 6 SGPSSPSIDQVEPYSST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRL 84 (122)
T ss_dssp CCCCCCEEEEEEECSSC-EEEEEECCCCC--CCEEEEEEEEEETTCCSCEEEEEEHHHHHTTTEEEECSCCTTCEEEEEE
T ss_pred cCCcCCCccEEEecCCc-EEEEECCCCcCCCCcceEEEEEEEECCCCCcccceeeeeecCccceEEeCCCCCCCEEEEEE
Confidence 56888888988888777 99999999877776699999999988767774322 223567899999999999999999
Q ss_pred EEEeCCCCCCCCCCCCc
Q psy7040 400 LAVNKGGPGEPSDPTAP 416 (716)
Q Consensus 400 ~a~n~~g~~~~s~~~~~ 416 (716)
+|.|..|.|.+|.....
T Consensus 85 ~A~n~~G~g~~S~~~~~ 101 (122)
T 2e3v_A 85 AALNGKGLGEISAASEF 101 (122)
T ss_dssp EEEETTEECCCCCCEEE
T ss_pred EEEeCCccCCCcccccc
Confidence 99999999999887655
No 185
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.33 E-value=4.6e-12 Score=124.10 Aligned_cols=220 Identities=11% Similarity=0.029 Sum_probs=136.7
Q ss_pred CCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCccc-ccccccEEEecCCeEEEEEEE-eccCCCe
Q psy7040 380 DTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYIN-RDQLSDIKVRAGSNFEFDINV-IGEPIPT 457 (716)
Q Consensus 380 ~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~-~~~~~~~~~~~g~~~~~~~~v-~~~p~~~ 457 (716)
...++.|.++...+.+.|+|+|.|..+...... ....... .|.+. ......+....+..+.+.|.+ .+.|.+.
T Consensus 72 ~~~sL~I~~v~~~D~G~Y~C~a~n~~~~~~~~~--~~~~v~~---~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~~ 146 (308)
T 4fom_A 72 NDATITLHNIGFSDSGKYICKAVTFPLGNAQSS--TTVTVLV---EPTVSLIKGPDSLIDGGNETVAAICIAATGKPVAH 146 (308)
T ss_dssp SBCCEEECSCCGGGCEEEEEEEEETTTEEEEEE--EEEEEEB---CCEEEEEECSSCCCTTCSCEEEEEEEEEEEBSCCE
T ss_pred CceEEEEccCCHHHCEEEEEEEeeCCCcceeee--eEEEeee---ccccccccccceeEEcCCceEEEEEEecCCcCCce
Confidence 345799999999999999999998643221111 1111111 11111 112223344567889999976 7899999
Q ss_pred EEEEeCCeEeccCCcEEEEeCC---CeEEEEECCCCCCCceeEEEEEEcCCCceeeEEEEEE--E-EEEEEEeCCC----
Q psy7040 458 KEWLCNDITIISKDRFKIVNDD---KSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTV--L-GCSLKWNPPE---- 527 (716)
Q Consensus 458 ~~W~~~~~~~~~~~~~~~~~~~---~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v--~-~v~l~W~~p~---- 527 (716)
+.|++++..+...... .... ....|.|......|.|.|+|.|.|..|.......+.+ . ...+.-.+..
T Consensus 147 i~W~~~~~~~~~~~~~--~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~~~~~~~~~~~~ 224 (308)
T 4fom_A 147 IDWEGDLGEMESTTTS--FPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQYAPEVSVTGYDGNWF 224 (308)
T ss_dssp EEECCCSSBCCEEEEE--CTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCCEEEEECCBCCCSCEE
T ss_pred EEEEECCcccccccce--eeeecccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEecCCeeEEcccceeee
Confidence 9999998776422111 0001 1346899999999999999999999887655544432 2 1222211111
Q ss_pred CCCCCceeeEEEEEEecCCCce-eeeEEEccceeeeeccccceeEEEEcCCCCCCeEEEEEEEEcCCCCCccceeeeccC
Q psy7040 528 DDGGAPIEYYMVEKMETDTGKV-LIKWIRTNDKRVTIDNVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTD 606 (716)
Q Consensus 528 ~~~~~~i~~y~v~~~~~~~~~~-~~~w~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~~~~v~~ 606 (716)
..+......|.+... +.| .+.|++.+..............+.|.++...+.+.|+|.|.|..|....+..+.|.+
T Consensus 225 ~~g~~v~l~C~~~g~----P~p~~v~W~k~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~A~N~~G~~~~~~~l~V~~ 300 (308)
T 4fom_A 225 VGRKGVNLKCNADAN----PPPFKSVWSRLDGQWPDGLLASDNTLHFVHPLTFNYSGVYICKVTNSLGQRSDQKVIYISD 300 (308)
T ss_dssp TTCCSCEEECCEEEE----SCEEEEECCBSSSCCCSSCBCSTTEEECCSCCCSCCCSEEEEEEEETTEEEEEEEECCEEC
T ss_pred eccccEEEEEEEecC----CCCcEEEEEECCeECCCcEEEcCCeEEEECCCChhhCEEEEEEEEeCCCcEEEEEEEEEEc
Confidence 111122234444333 333 388998776554333334446677889999999999999999999887777777888
Q ss_pred CCCC
Q psy7040 607 KPSA 610 (716)
Q Consensus 607 ~p~~ 610 (716)
+|-.
T Consensus 301 ~P~~ 304 (308)
T 4fom_A 301 PPHH 304 (308)
T ss_dssp CC--
T ss_pred CCCC
Confidence 7753
No 186
>1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.33 E-value=3.5e-12 Score=100.00 Aligned_cols=94 Identities=26% Similarity=0.349 Sum_probs=78.0
Q ss_pred CCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEee-ecCCCCeEEecCCCCCCeEEEEEEE
Q psy7040 323 NQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQ-TEGDTPKGKVLDLIEGNQYEFRVLA 401 (716)
Q Consensus 323 ~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~-~~~~~~~~~i~~l~~~~~Y~~~v~a 401 (716)
.+|++|.++.+.. ..+++.|+|.+|.. ++++|.+|.|+|+. .+..|..... .....+++.+.+|.+++.|.|+|.|
T Consensus 6 ep~~pP~~l~v~~-~~~sv~L~W~pP~~-~~~~I~gY~vey~~-~~~~W~~~~~~~~~~~t~~~v~~L~pg~~Y~FRV~A 82 (108)
T 1v5j_A 6 SGLSPPRGLVAVR-TPRGVLLHWDPPEL-VPKRLDGYVLEGRQ-GSQGWEVLDPAVAGTETELLVPGLIKDVLYEFRLVA 82 (108)
T ss_dssp CCCCCCEEEEEEE-CSSSEEEEEECCSC-CSSCCCBEEEEEEE-TTCCCEEEEEEECSSCCEEECCCCCTTSCEECCBEE
T ss_pred CCCCCCcceEEEE-eCCEEEEEECCCCC-CCCCCcEEEEEEEe-CCCCcEEeeeecCCCcCEEEeCCCCCCCEEEEEEEE
Confidence 4568898998875 56789999999885 66789999999998 4467876553 3567899999999999999999999
Q ss_pred EeCCCCCCCCCCCCceEe
Q psy7040 402 VNKGGPGEPSDPTAPHIA 419 (716)
Q Consensus 402 ~n~~g~~~~s~~~~~~~~ 419 (716)
.|..|.|.+|+.....+.
T Consensus 83 ~n~~G~s~pS~~~~v~T~ 100 (108)
T 1v5j_A 83 FAGSFVSDPSNTANVSTS 100 (108)
T ss_dssp EETTEEEEECSCCCCCCS
T ss_pred EcCCCCcCCCCCEEEEeC
Confidence 999999999887665543
No 187
>2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens}
Probab=99.32 E-value=3.6e-12 Score=104.15 Aligned_cols=92 Identities=28% Similarity=0.487 Sum_probs=78.6
Q ss_pred cCCCCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCCcEEEecc-cCCCeEEecCCCCCcEEEEEEEEEe
Q psy7040 53 RGLDPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETGVWIPVGK-TREPEMDVTGLTPGHEYKFRVKALN 131 (716)
Q Consensus 53 ~~~~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~-~~~~~~~i~~L~~~~~y~~~v~a~~ 131 (716)
..+.||..+.+..++.+++.|+|++|..+++.++.+|.|+++..+...|..+.. ...++++|.+|.+++.|.|+|+|.|
T Consensus 16 ~~P~~P~~l~~~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n 95 (120)
T 2yux_A 16 DRPGPPQIVKIEDVWGENVALTWTPPKDDGNAAITGYTIQKADKKSMEWFTVIEHYHRTSATITELVIGNEYYFRVFSEN 95 (120)
T ss_dssp CCCCCCSCEEEEEEETTEEEEEECCCSCCCSSCCCCCCEEEEETTTCCCEEEESSCCSSCCEECCCCSSEEEEEEECCCS
T ss_pred cCCCcCCCCEEEEecCCEEEEEEcCCCcCCCCCceEEEEEEEECCCCceEEeeecCCcCEEEECCCCCCCEEEEEEEEee
Confidence 445667778888999999999999998777788999999999888888887653 3458899999999999999999999
Q ss_pred cCccCCCccccce
Q psy7040 132 KEGESEPLETFSS 144 (716)
Q Consensus 132 ~~g~~~~s~~~~~ 144 (716)
..|.+.++.....
T Consensus 96 ~~G~s~~S~~s~~ 108 (120)
T 2yux_A 96 MCGLSEDATMTKE 108 (120)
T ss_dssp SSCSCSSCEECSS
T ss_pred CCcCCCCccCcCC
Confidence 9999998875543
No 188
>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.32 E-value=2e-11 Score=99.84 Aligned_cols=97 Identities=25% Similarity=0.315 Sum_probs=81.9
Q ss_pred CCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEE
Q psy7040 321 PFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVL 400 (716)
Q Consensus 321 ~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~ 400 (716)
...+|.+|.++.+...+.+++.|+|.+|... ++.+.+|.|+|+..+...|............+.|.+|.+++.|.|+|+
T Consensus 14 ~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~-~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~ 92 (119)
T 2ed7_A 14 SSVLPSAPRDVVPVLVSSRFVRLSWRPPAEA-KGNIQTFTVFFSREGDNRERALNTTQPGSLQLTVGNLKPEAMYTFRVV 92 (119)
T ss_dssp SSSSCCCCSCCEEEEECSSCEEEECCCCSCC-SSCEEEEEEEEEESSCCCCEEEECCCTTCCEEEECSCCSSSEEEECCE
T ss_pred CCCCCcCCcceEEEecCCCEEEEEEeCCCCC-CCcEEEEEEEEEeCCCCcceeeEeecCCceEEEeCCCCCCCEEEEEEE
Confidence 4577899999999999999999999998754 457999999999887666665555556788999999999999999999
Q ss_pred EEeCCCCCCCCCCCCceE
Q psy7040 401 AVNKGGPGEPSDPTAPHI 418 (716)
Q Consensus 401 a~n~~g~~~~s~~~~~~~ 418 (716)
|.|..|.|.++......+
T Consensus 93 A~n~~G~g~~S~~~~~~T 110 (119)
T 2ed7_A 93 AYNEWGPGESSQPIKVAT 110 (119)
T ss_dssp EEESSCBCSCCCCEEEEC
T ss_pred EEcCCccCCCcCCEEEEe
Confidence 999999998887655444
No 189
>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.32 E-value=6.7e-12 Score=102.59 Aligned_cols=97 Identities=21% Similarity=0.275 Sum_probs=78.7
Q ss_pred EecCCCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEE
Q psy7040 317 EAKNPFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYE 396 (716)
Q Consensus 317 ~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~ 396 (716)
.+.+....|.+|.++.+...+.+++.|+|.+|...++ .|.+|.|+|+..+...+............+.|.+|.+++.|.
T Consensus 10 ~~~T~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~g-~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~ 88 (119)
T 1wfn_A 10 LVRTHEDVPGPVGHLSFSEILDTSLKVSWQEPGEKNG-ILTGYRISWEEYNRTNTRVTHYLPNVTLEYRVTGLTALTTYT 88 (119)
T ss_dssp SCCSSCCSCCCCSCCEEESCCSSEEEEECCCCTTCCS-CCCEEEEEEEESSCGGGCCCEEECSSCCEEEEESCCTTCEEE
T ss_pred EEECCCCCCCCCCceEEEECCCCEEEEEEcCCCCCCC-cEEEEEEEEEECCCCCceEEEEeCCCceEEEEcCCCCCCEEE
Confidence 3444557889999999999999999999999876544 699999999987644333333445678899999999999999
Q ss_pred EEEEEEeCCCCCCCCCCC
Q psy7040 397 FRVLAVNKGGPGEPSDPT 414 (716)
Q Consensus 397 ~~v~a~n~~g~~~~s~~~ 414 (716)
|+|+|.|..|.|.++...
T Consensus 89 ~~V~A~n~~G~g~~S~~~ 106 (119)
T 1wfn_A 89 IEVAAMTSKGQGQVSAST 106 (119)
T ss_dssp EEEEEECSSCEEEEEEEE
T ss_pred EEEEEEcCCccCCCCCCE
Confidence 999999999998877654
No 190
>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.32 E-value=2.3e-11 Score=99.65 Aligned_cols=93 Identities=29% Similarity=0.493 Sum_probs=76.9
Q ss_pred CCCCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCC-CCcEEEecc---cCCCeEEecCCCCCcEEEEEEEE
Q psy7040 54 GLDPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPE-TGVWIPVGK---TREPEMDVTGLTPGHEYKFRVKA 129 (716)
Q Consensus 54 ~~~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~-~~~~~~~~~---~~~~~~~i~~L~~~~~y~~~v~a 129 (716)
.+.||..+.+..++.+++.|+|+++. +++.+|.+|.|+|+..+ ...|..+.. ...+.++|.+|.+++.|.|||+|
T Consensus 17 ~P~~P~~~~~~~~~~~sv~l~W~p~~-~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A 95 (121)
T 1x4z_A 17 PPEAPDRPTISTASETSVYVTWIPRG-NGGFPIQSFRVEYKKLKKVGDWILATSAIPPSRLSVEITGLEKGISYKFRVRA 95 (121)
T ss_dssp CCCCCCCCEEEECCSSEEEEECCCCC-CTTSCCCEEEEEEEESSSCCCCEEEEEEECTTCCEEEEESCCTTCEEEEEEEE
T ss_pred CCccCCCCEEEEccCCEEEEEEECCC-CCCCcceEEEEEEEECCCCCceEEeecccCCCcCEEEECCCCCCCEEEEEEEE
Confidence 34556668899999999999999654 57778999999999876 577876643 24589999999999999999999
Q ss_pred EecCccCCCccccceEEe
Q psy7040 130 LNKEGESEPLETFSSIIA 147 (716)
Q Consensus 130 ~~~~g~~~~s~~~~~~~~ 147 (716)
.|..|.+.++.....++.
T Consensus 96 ~n~~G~s~~S~~~~~v~~ 113 (121)
T 1x4z_A 96 LNMLGESEPSAPSRPYVV 113 (121)
T ss_dssp EETTEECCCCCCCCCEEC
T ss_pred EcCCCcCCCcCCCCCEEc
Confidence 999999999888765554
No 191
>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.32 E-value=3e-12 Score=102.40 Aligned_cols=83 Identities=31% Similarity=0.436 Sum_probs=70.2
Q ss_pred EEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCCcEEEecccCCCeEEecCCCCCcEEEEEEEEEecCccCCCccccce
Q psy7040 65 NIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETGVWIPVGKTREPEMDVTGLTPGHEYKFRVKALNKEGESEPLETFSS 144 (716)
Q Consensus 65 ~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~~~~g~~~~s~~~~~ 144 (716)
.++.+++.|+|++|..+ +.+|.+|.|+|+......|..+.....++++|.+|.+++.|.|||+|.|..|.+.+|.....
T Consensus 21 ~~~~~sv~l~W~~p~~~-~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~ 99 (110)
T 2db8_A 21 CTHNNSATLSWKQPPLS-TVPADGYILELDDGNGGQFREVYVGKETMCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVL 99 (110)
T ss_dssp SCSSSEEEECCBCCTTC-CSCCSEEEEEECCSSSSCCEEEEEESCSCEEEECCCSSSCCEEEEEEECSSCBCCCCSCEEC
T ss_pred ccCCCEEEEEECCCCCC-CCCccEEEEEEEeCCCCceEEEEeCCcCEEEECCCCCCCEEEEEEEEEeCCcCCCCCCCEEE
Confidence 45789999999999754 46799999999887777888776666789999999999999999999999999998877655
Q ss_pred EEec
Q psy7040 145 IIAR 148 (716)
Q Consensus 145 ~~~~ 148 (716)
.+..
T Consensus 100 ~T~~ 103 (110)
T 2db8_A 100 QTSE 103 (110)
T ss_dssp CCCC
T ss_pred EcCC
Confidence 5543
No 192
>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.31 E-value=3.5e-12 Score=104.78 Aligned_cols=104 Identities=28% Similarity=0.548 Sum_probs=86.6
Q ss_pred CCCceeEEEEEEecCCCCCCCCe--EEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCCCCCeEEc-cccCcccceEE
Q psy7040 208 NGKDSVEVEVIVLDKPSPPGGPL--KVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEATGRWTPA-GETEGPVTGLE 284 (716)
Q Consensus 208 ~g~~~~~~~~~v~~~p~~p~~~~--~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~-~~~~~~~~~~~ 284 (716)
.|..+.++.+.+.++|.+|.+ + .+.....+++.|+|.+| .+++.++.+|.|+++..+ ..|..+ .........+.
T Consensus 3 ~G~~~~s~~l~v~~~P~~P~~-~~~~~~~~~~~sv~l~W~~p-~~~~~~i~~Y~v~~~~~~-~~~~~~~~~~~~~~~~~~ 79 (121)
T 1wf5_A 3 SGSSGRSAHLRVRQLPHAPEH-PVATLSTVERRAINLTWTKP-FDGNSPLIRYILEMSENN-APWTVLLASVDPKATSVT 79 (121)
T ss_dssp CCCCCCCCCSSCCCCCCCCSS-CEEEECSSSTTEEEEECCCC-CCCSSCEEEEEEEEECTT-CCCEEEESSCCTTCCEEE
T ss_pred CCcccceEEEEEeeCCccCCC-cceeeEeccCCEEEEEEcCC-CCCCCcceEEEEEEEcCC-CCceEeEcccCCCccEEE
Confidence 566777778888899999998 7 67777889999999987 456668999999998765 778766 34445678999
Q ss_pred EcCCCCCCeEEEEEEEEcCCCCCCCCcccc
Q psy7040 285 VEGLIPNHKYKFRVRAVNKQGKSEPLTTTA 314 (716)
Q Consensus 285 i~~L~p~~~y~~~v~a~n~~g~~~~~~~~~ 314 (716)
|.+|.|++.|.|+|+|.|..|.+.++....
T Consensus 80 v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~ 109 (121)
T 1wf5_A 80 VKGLVPARSYQFRLCAVNDVGKGQFSKDTE 109 (121)
T ss_dssp EESCCTTCEEEEEEEEEESSCEEEECCCCS
T ss_pred ECCcCCCCEEEEEEEEEcCCccCCCcCCcc
Confidence 999999999999999999999988877653
No 193
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.31 E-value=5.3e-10 Score=116.59 Aligned_cols=315 Identities=10% Similarity=0.004 Sum_probs=163.3
Q ss_pred eEEEEec--CCccEEEEeccccCcceEEEEEEEeCCCC------ceeEEEEEEec-CCCCCCCCeEEe----EEeCCeEE
Q psy7040 175 VRKVQHL--DYNTKLGVRMAQRADAGFYTVTAENINGK------DSVEVEVIVLD-KPSPPGGPLKVS----NVHAEGVT 241 (716)
Q Consensus 175 ~~~~~~~--~~~~~l~i~~l~~~~~g~y~c~a~n~~g~------~~~~~~~~v~~-~p~~p~~~~~~~----~~~~~~~~ 241 (716)
|+.+... .....|.|.+++..|+|.|.|.+.|..|. ....+.|.|.. .+.+|. +... ...+..+.
T Consensus 68 R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~--i~~~~~~~~~~g~~v~ 145 (475)
T 1iga_A 68 RVTFTRDTSATTAYMGLSSLRPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTVSSASPTSPK--VFPLSLCSTQPDGNVV 145 (475)
T ss_pred ceEEEEcCCCCeEEEEECCCChhhCEEEEEEEeccCCCccceeeecCceEEEeccCCCcCCe--EEecCccccCCCCeEE
Confidence 4444432 34578999999999999999999998762 22445677764 223332 2211 13577899
Q ss_pred EEEECCCCCCCCccceEEEEEEeCCCC-CeEEcc----ccCc---ccceEEEcCCCCCCeEEEEEEEEcCCCCCCCCccc
Q psy7040 242 LDWKVPDDDGGQPIEKYVVDKMDEATG-RWTPAG----ETEG---PVTGLEVEGLIPNHKYKFRVRAVNKQGKSEPLTTT 313 (716)
Q Consensus 242 l~W~~p~~~~~~~~~~y~v~~~~~~~~-~~~~~~----~~~~---~~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~~~~~ 313 (716)
|.|..... .|.....|.|...+.. .-.... ...+ ....+.|......+.+.|+|.|.|..+... ..
T Consensus 146 L~C~~~g~---~P~~p~~v~W~~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~-~~-- 219 (475)
T 1iga_A 146 IACLVQGF---FPQEPLSVTWSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPSQ-DV-- 219 (475)
T ss_pred EEEEEeee---cCCCceEEEEcCCCcccceEeCCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCCce-ee--
Confidence 99986321 1110112333222110 000000 0000 012467777777788999999999876321 11
Q ss_pred ceEEecC----------------CC-CCC----CCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCc--
Q psy7040 314 ASIEAKN----------------PF-NQP----GKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPI-- 370 (716)
Q Consensus 314 ~~~~~~~----------------~~-~~p----~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~-- 370 (716)
.+...- .. ..| .+|.... ...+..+.|.|...... +.....|.| ......
T Consensus 220 -~v~l~V~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~--~~~G~~v~L~C~~~g~~---p~~~~~i~W-~~~~~~~~ 292 (475)
T 1iga_A 220 -TVPCPVPSTPPTPSPSTPPTPSPSCCHPRLSLHRPALED--LLLGSEANLTCTLTGLR---DASGVTFTW-TPSSGKSA 292 (475)
T ss_pred -eEecccccCcccccccccccCCCCCCCcEEEEcCCChHH--hccCCceEEEEEEEccc---CCCceEEEE-CCCCcCCc
Confidence 111000 00 000 0010000 02234455555541110 100012333 111000
Q ss_pred e--EEEeeec---CCCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEE
Q psy7040 371 W--EKCAQTE---GDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFE 445 (716)
Q Consensus 371 ~--~~~~~~~---~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~ 445 (716)
. ....... .....+.|.++...+...|.|.|.|..|...... .+.......+|.+.........+..|..+.
T Consensus 293 ~~~~~~~~~~g~~~~~~~L~I~~~~~~d~G~Y~C~a~n~~~~~~~~~---~v~~~~~~~~P~v~~~~~~~~~v~~g~~~~ 369 (475)
T 1iga_A 293 VQGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTAAYPESKTPLTA---TLSKSGNTFRPEVHLLPPPSEELALNELVT 369 (475)
T ss_pred cccCceECCCCCEEEEEEEEEchHHhccCCcEEEEEEcCCCCCceEE---EeecCCCCCCCeEEEECCChHHhccCCceE
Confidence 0 0000000 0123577888888888999999999887642111 111112234666543323333366788899
Q ss_pred EEEEEeccCC--CeEEEEeCCeEeccCCcEE----EE---eCC---CeEEEEECCCCCCCceeEEEEEEcCCCc
Q psy7040 446 FDINVIGEPI--PTKEWLCNDITIISKDRFK----IV---NDD---KSTKLKVFDSKRGDSGIYTLAVKNSWGT 507 (716)
Q Consensus 446 ~~~~v~~~p~--~~~~W~~~~~~~~~~~~~~----~~---~~~---~~~~l~i~~l~~~~~~~y~~~a~n~~g~ 507 (716)
|.|.+.+.++ +.+.|++++..+....... .. .++ ....|.|......+.|.|+|.|.|....
T Consensus 370 L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~~~g~YtC~a~n~~l~ 443 (475)
T 1iga_A 370 LTCLARGFSPKDVLVRWLQGSQELPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEALP 443 (475)
T ss_pred EEEEEeeeECCCCEEEEEECCEECCCCceeecccccccCCCCCcEEEEEEEEEChHHhcCCCEEEEEEEcCCCC
Confidence 9999988633 4899999998876543111 11 111 1235677777777899999999998754
No 194
>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.31 E-value=1.2e-11 Score=101.02 Aligned_cols=94 Identities=19% Similarity=0.306 Sum_probs=80.4
Q ss_pred ecCCCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEE
Q psy7040 318 AKNPFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEF 397 (716)
Q Consensus 318 ~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~ 397 (716)
+.+...+|.+|.++.+...+.+++.|+|.+|..+ + .|.+|.|+|+..+...|............+.|.+|.+++.|.|
T Consensus 11 ~~t~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~-g-~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~ 88 (118)
T 2yrz_A 11 SRLTAGVPDTPTRLVFSALGPTSLRVSWQEPRCE-R-PLQGYSVEYQLLNGGELHRLNIPNPAQTSVVVEDLLPNHSYVF 88 (118)
T ss_dssp TSSSCSCCCCCCCCEECCCBTTEEEEECCCCCCS-S-CEEEEEEEEEBSSSCCEEEEEESCTTCCEEEEESCCTTCEEEE
T ss_pred eecCCCCCCCCCceEEEeCCCCEEEEEeCCCCCC-C-CccEEEEEEEECCCCceEEEEcCCCCcCEEEeCCCCCCCEEEE
Confidence 4455678999999999999999999999998765 3 7999999999877667766665556789999999999999999
Q ss_pred EEEEEeCCCCCCCCCC
Q psy7040 398 RVLAVNKGGPGEPSDP 413 (716)
Q Consensus 398 ~v~a~n~~g~~~~s~~ 413 (716)
+|+|.|..|.|.++..
T Consensus 89 ~V~A~n~~G~g~~S~~ 104 (118)
T 2yrz_A 89 RVRAQSQEGWGREREG 104 (118)
T ss_dssp EEEEEESSCEEEEEEE
T ss_pred EEEEEcCCcCCCCcCC
Confidence 9999999999887753
No 195
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.31 E-value=7e-11 Score=107.40 Aligned_cols=175 Identities=13% Similarity=0.087 Sum_probs=108.9
Q ss_pred cEEEecCCeEEEEEEEeccCC-----CeEEEEe-CCeEeccCCcEEEEeCC---CeEEEEECCCCCCCceeEEEEEEcCC
Q psy7040 435 DIKVRAGSNFEFDINVIGEPI-----PTKEWLC-NDITIISKDRFKIVNDD---KSTKLKVFDSKRGDSGIYTLAVKNSW 505 (716)
Q Consensus 435 ~~~~~~g~~~~~~~~v~~~p~-----~~~~W~~-~~~~~~~~~~~~~~~~~---~~~~l~i~~l~~~~~~~y~~~a~n~~ 505 (716)
.+.+..|+.+.|.|.+.+.|. +.+.|++ ++.......++.+..+. ....|.|.++...|.|.|+|.|.|..
T Consensus 11 ~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~ 90 (202)
T 3bp6_B 11 VYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVICGA 90 (202)
T ss_dssp EEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred CEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEEEeCC
Confidence 477899999999999999886 7899999 44433333444443321 45789999999999999999999988
Q ss_pred CceeeEEEEEEEEEEEEEeCCCCCCCCceeeEEEEEEecCCCceeeeEEEccceeeeeccccceeEEEEcCCCCCCeEEE
Q psy7040 506 GTDKGTAKVTVLGCSLKWNPPEDDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDNVDYFTKITIRPLQRSDTAQY 585 (716)
Q Consensus 506 g~~~~s~~~~v~~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~ 585 (716)
|.......+.+. .+.. . ..+.+.....|..-.+
T Consensus 91 ~~~~~~~~l~V~-------~~~~---~-------------------------------------p~~~~~~~~~g~~v~l 123 (202)
T 3bp6_B 91 AWDYKYLTVKVK-------ASYM---R-------------------------------------IDTRILEVPGTGEVQL 123 (202)
T ss_dssp EEEEEEEEEEEE-------BCCC---C-------------------------------------EEEEEEECTTTCCEEE
T ss_pred CcceEEEEEEec-------CCCC---c-------------------------------------ccEEEEecCCCCeEEE
Confidence 765444444333 1100 0 0011111223455566
Q ss_pred EEEEEcCCCCCccceeeeccCCCCCCccceeeccceeEEEEEEeeEEEEeeeeccCceeeEEEEeCCeEeeec----ccc
Q psy7040 586 TVTATNSQGKDQVFIEVVVTDKPSAPEGPIQWLLTLTDVTWEISNYLQELHSSLMPISLESQYLMNDKRVTID----NVD 661 (716)
Q Consensus 586 ~v~a~n~~G~~~~s~~~~v~~~p~~~~~~~~~~~~~v~l~w~i~~y~v~~~~~~~~~~~~~~W~~~~~~~~~~----~~~ 661 (716)
.|.+. | .+. | .+.|++++..+... ..+
T Consensus 124 ~C~~~---g--~P~-----------p---------------------------------~v~W~~~~~~~~~~~~~~~~~ 154 (202)
T 3bp6_B 124 TCQAR---G--YPL-----------A---------------------------------EVSWQNVSVPANTSHIRTPEG 154 (202)
T ss_dssp EEEEE---E--BSC-----------C---------------------------------EEEETTCCSCCEEEEEECTTS
T ss_pred EEEcc---c--cCC-----------c---------------------------------eEEEEeCCCCccCceeeCCCC
Confidence 66662 1 110 0 45666655543322 122
Q ss_pred eeeEEEEccCCCCCcEEEEEEEEcCCCCceeeEEEEEecCCCCC
Q psy7040 662 YFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTDKPSAP 705 (716)
Q Consensus 662 ~~~~~~i~~l~~~~~y~y~~~a~n~~G~~~~s~~l~v~~~p~~p 705 (716)
....+.|..+...|.|.|+|.|.|..|....+..|.|..+..|.
T Consensus 155 ~~~~~~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~v~~~~~p~ 198 (202)
T 3bp6_B 155 LYQVTSVLRLKPQPSRNFSCMFWNAHMKELTSAIIDPLSRMEPK 198 (202)
T ss_dssp CEEEEEEEEECCCTTCCEEEEEEETTTTEEEEEEECC-------
T ss_pred CEEEEEEEEEEcCCCCEEEEEEEcCCcccccEEEEEecCcCCCC
Confidence 22556788899999999999999999999989888887654443
No 196
>1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.30 E-value=2e-11 Score=97.87 Aligned_cols=97 Identities=23% Similarity=0.420 Sum_probs=77.8
Q ss_pred CCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCC-CceEEEeeecCCCCeEEecCCCCCCeEEEEEEE
Q psy7040 323 NQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYS-PIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLA 401 (716)
Q Consensus 323 ~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~-~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a 401 (716)
.+|.+|..+.+...+.+++.|+|.+|..+++.+|.+|.|+++..+. ..|.... .....++++.+|.+++.|.|+|+|
T Consensus 6 ~~P~~P~~p~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~--~~~~~~~~v~~L~p~t~Y~frV~A 83 (109)
T 1x5x_A 6 SGPSMPASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKY--DGEDLAYTVKNLRRSTKYKFKVIA 83 (109)
T ss_dssp CCCCCCCCCEEEEECSSEEEEECCCCSSCCSSSSCEEEEEECCSSSSCCCEEEE--EESCSEEEEESCCSSCEEEEEEEE
T ss_pred CCCcCCCCCEEEEccCCEEEEEEcCCCCCCCCcccEEEEEEecCCCCcceEEeE--eCCccEEEECCCCCCCEEEEEEEE
Confidence 4677788888999999999999999887766689999999987664 3455433 234788999999999999999999
Q ss_pred EeCCCCCCCCCCCCceEeec
Q psy7040 402 VNKGGPGEPSDPTAPHIARA 421 (716)
Q Consensus 402 ~n~~g~~~~s~~~~~~~~~~ 421 (716)
.|..|.|.++......+...
T Consensus 84 ~n~~G~s~~S~~~~~~T~~~ 103 (109)
T 1x5x_A 84 YNSEGKSNPSEVVEFTTCPD 103 (109)
T ss_dssp ECSSCEEEECCCEEEECCCC
T ss_pred EeCCCCcCCccCEEeEeCCC
Confidence 99999988877655444433
No 197
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.30 E-value=2.2e-12 Score=133.09 Aligned_cols=293 Identities=14% Similarity=0.133 Sum_probs=167.2
Q ss_pred CCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEecc-CCC-eE
Q psy7040 381 TPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGE-PIP-TK 458 (716)
Q Consensus 381 ~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~-p~~-~~ 458 (716)
...+.|.++...+.+.|+|.|.|..+. .+.............+|.+....+ ...+..|..+.|.|.+.+. |.+ .+
T Consensus 77 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~--~~~~~~l~V~~~~~~~P~i~~~~~-~~~~~~G~~v~L~C~~~g~~P~p~~v 153 (434)
T 1igy_B 77 TANIHLSSLTSDDSAVYYCVREGEVPY--WGQGTTVTVSSAKTTPPSVYPLAP-GSAAQTNSMVTLGCLVKGYFPEPVTV 153 (434)
T ss_dssp BBCEEECSBCGGGCSEECCCCSSSSCC--CCCCEECEECCSCCBCCCEEEECC-CCCCCCTTEEEEEEEEEEEBSSCCEE
T ss_pred EEEEEECCCChHHCEEEEEEEEccccc--cCCceEEEEccCCCCCCeEEEcCC-ccccCCCCcEEEEEEEeeecCCCeEE
Confidence 457899999999999999999885322 111111222112233454432111 1224689999999999886 666 99
Q ss_pred EEEeCCeEec--------cCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEEEEEEE-------------
Q psy7040 459 EWLCNDITII--------SKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVL------------- 517 (716)
Q Consensus 459 ~W~~~~~~~~--------~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v~------------- 517 (716)
.|++++.... ....+.. ...|.|.+....| |.|+|.|.|..|.......+.+.
T Consensus 154 ~W~k~~~~~~~~~~~~~~~~~~~~~-----~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~~~~~~~~~~v~~~~~~~ 227 (434)
T 1igy_B 154 TWNSGSLSSGVHTFPAVLQSDLYTL-----SSSVTVPSSPRPS-ETVTCNVAHPASSTKVDKKIVPRDCGCKPCICTVPE 227 (434)
T ss_dssp EETTTTBCSSEEECCCEECSSCEEE-----EEEEEEETTTTTS-SCCEEEEECTTTTCCEEEECCCCCCCCCCCCCCCSS
T ss_pred EEeeCCcCCCeEecCceecCCcEEE-----EEEEEEcchhcCC-CcEEEEEEeCCCCccceeeccCCCCCCccccCCCCc
Confidence 9999886521 0111211 2368899998888 99999999999875544433221
Q ss_pred EEEEEEeCCC-----CCCCCceeeEEEEEEecCCCceeeeEEEccceeeeec------ccc----ceeEEEEcCCCCCCe
Q psy7040 518 GCSLKWNPPE-----DDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTID------NVD----YFTKITIRPLQRSDT 582 (716)
Q Consensus 518 ~v~l~W~~p~-----~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~------~~~----~~~~~~i~~L~~~~~ 582 (716)
...+.-.+|. ..+......|.+.......+.+.+.|++.+....... ..+ ....+.|.++...+.
T Consensus 228 ~p~v~~~~p~~~~~v~~G~~~~L~C~~~g~~p~P~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 307 (434)
T 1igy_B 228 VSSVFIFPPKPKDTLLITVTPKVTCVVVDISKDDPEVQFSWFVDNVEVHTAQTQPREEQFNSTFRVVSALPIMHQDWLNG 307 (434)
T ss_dssp SCCEEEECCCHHHHHSTTSCCEEEEEECCCCSSCCCCCBCBBSSSCCBCCCSCCCCCCCCSSSCCCCCCEECCHHHHHHT
T ss_pred CcEEEEeCCChHHhcccCCCcEEEEEEeccccCCCCeEEEEEeCCcccCCcccCcceeCCCCcEEEEEEEEECHHHccCC
Confidence 0122222332 2233334455554221000123489998775432110 000 123577788877888
Q ss_pred EEEEEEEEcCCCCCccceeee----ccCCCCCCcc---ceeeccceeEEEEEEeeEEEEeeeeccCceeeEEEEeCCeEe
Q psy7040 583 AQYTVTATNSQGKDQVFIEVV----VTDKPSAPEG---PIQWLLTLTDVTWEISNYLQELHSSLMPISLESQYLMNDKRV 655 (716)
Q Consensus 583 y~~~v~a~n~~G~~~~s~~~~----v~~~p~~~~~---~~~~~~~~v~l~w~i~~y~v~~~~~~~~~~~~~~W~~~~~~~ 655 (716)
+.|+|.|.|..|.......+. +..+|..-.. ...+.+..+.|.|.+.|+.-. .-.+.|+++|..+
T Consensus 308 G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~--------~~~v~W~k~g~~l 379 (434)
T 1igy_B 308 KEFKCRVNSAAFPAPIEKTISKTKGKPRAPQVYTIPPPKEQMAKDKVSLTCMITDFFPE--------DITVEWQSDGQAP 379 (434)
T ss_dssp CCCBCCBCCSSCSSCCCCCCCCCCSCCBCCCCEEECCCSSSSSSSEEEEEEEEEEEBCS--------CEEEEEEETTSCC
T ss_pred CcEEEEEECCCCCCceeEEEeccCCCCcCCEEEEECCCHHHhcCCcEEEEEEEEeeECC--------CeEEEEEECCEec
Confidence 999999999988654333332 2233321000 011223446655554443100 0068999999877
Q ss_pred eecc------c--c---eeeEEEEccCCCCCcEEEEEEEEcCCCCc
Q psy7040 656 TIDN------V--D---YFTKITIRPLQRSDTAQYTVTATNSQGKD 690 (716)
Q Consensus 656 ~~~~------~--~---~~~~~~i~~l~~~~~y~y~~~a~n~~G~~ 690 (716)
.... . + ....|.|.....++.|.|+|.|.|.....
T Consensus 380 ~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~~ 425 (434)
T 1igy_B 380 ENYKNTQPIMDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGLHN 425 (434)
T ss_dssp SCCEECCCCCCSSSCEEEEEEEEEEHHHHHTTCCEEEEEEETTSGG
T ss_pred CCceeccceeCCCCcEEEEEEEEECchhccCCCEEEEEEEcCCCCC
Confidence 4320 1 1 11356677776778999999999976543
No 198
>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.30 E-value=4.3e-11 Score=97.29 Aligned_cols=96 Identities=21% Similarity=0.284 Sum_probs=79.8
Q ss_pred CCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEE
Q psy7040 323 NQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAV 402 (716)
Q Consensus 323 ~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~ 402 (716)
.+|.+|.++.+...+.+++.|+|.+|...+ +.+.+|.|+++..+...|.. ......++.|.+|.+++.|.|+|+|.
T Consensus 16 ~~P~~P~~l~~~~~~~~si~l~W~~p~~~~-~~i~~Y~v~~~~~~~~~~~~---~~~~~~~~~i~~L~p~t~Y~~~V~A~ 91 (116)
T 1x5g_A 16 QLPGPAPNLRAYAASPTSITVTWETPVSGN-GEIQNYKLYYMEKGTDKEQD---VDVSSHSYTINGLKKYTEYSFRVVAY 91 (116)
T ss_dssp SCCCCCSSCEEEEEETTEEEEECCCCSCCS-SCCSEEEEEEEETTCCCCCC---EEECSSEEEECSCCTTCEEEEEEEEE
T ss_pred CCCcCCCccEEEecCCCEEEEEEeCCCCCC-CcccEEEEEEEECCCCccEE---EecCCceEEEcCCCCCCEEEEEEEEE
Confidence 578899999999999999999999987544 47999999999877555532 23467899999999999999999999
Q ss_pred eCCCCCCCCCCCCceEeecC
Q psy7040 403 NKGGPGEPSDPTAPHIARAK 422 (716)
Q Consensus 403 n~~g~~~~s~~~~~~~~~~~ 422 (716)
|..|.|.++......+....
T Consensus 92 n~~G~g~~S~~~~~~T~~~~ 111 (116)
T 1x5g_A 92 NKHGPGVSTPDVAVRTLSDS 111 (116)
T ss_dssp CSSCCCCBCCCCCEECCCSS
T ss_pred cCCCcCCCCCCEEEECCCCC
Confidence 99999998887766665443
No 199
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.30 E-value=6.9e-12 Score=125.31 Aligned_cols=234 Identities=13% Similarity=0.033 Sum_probs=118.5
Q ss_pred ccEEEEeccccCcceEEEEEEEeCCCCceeEEEEEEecCCCCCCC----CeEEeEEeCCeEEEEEECCCCC-CCCccceE
Q psy7040 184 NTKLGVRMAQRADAGFYTVTAENINGKDSVEVEVIVLDKPSPPGG----PLKVSNVHAEGVTLDWKVPDDD-GGQPIEKY 258 (716)
Q Consensus 184 ~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~~p~~----~~~~~~~~~~~~~l~W~~p~~~-~~~~~~~y 258 (716)
...|.|.+++..|+|.|+|.|.|..|.....+.|.|..+|..... +.......++.+.|.|...... .+.+...+
T Consensus 78 ~~~L~i~~~~~~D~G~Y~C~a~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v 157 (349)
T 4dep_C 78 KDVLWFRPTLLNDTGNYTCMLRNTTYCSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTI 157 (349)
T ss_dssp TTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEE
T ss_pred CCEEEEccCChhhCEEEEEEEecCCceEEEEEEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCceE
Confidence 468999999999999999999999998888899999876643322 1234455678899999753221 22233333
Q ss_pred EEEEEeCCCCCeEEccccCcccceEEEcCCCCCCeEEEEEEEEcCCCCCCCCcccceEEecCCCCCCCCCCCcEEEeeeC
Q psy7040 259 VVDKMDEATGRWTPAGETEGPVTGLEVEGLIPNHKYKFRVRAVNKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDFDT 338 (716)
Q Consensus 259 ~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~ 338 (716)
.+.. .+... ............+.|.++...+.+.|.|.|.|..+..... ..
T Consensus 158 ~W~k--~~~~l-~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~-~~------------------------- 208 (349)
T 4dep_C 158 TWYM--GCYKI-QNFNNVIPEGMNLSFLIALISNNGNYTCVVTYPENGRTFH-LT------------------------- 208 (349)
T ss_dssp EEEE--TTEEC-CSCSSEEEETTEEEEESCCGGGCEEEEEEEEEEETTEEEE-EE-------------------------
T ss_pred EEee--CCEEC-CCccceeecCCEEEEeeeeecCCcEEEEEEEEeeCCEEEE-EE-------------------------
Confidence 3322 11100 0000001223679999999999999999999854211000 00
Q ss_pred CeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceE
Q psy7040 339 DFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHI 418 (716)
Q Consensus 339 ~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~ 418 (716)
..+.|.-..+.. .
T Consensus 209 ~~~~l~v~~~~~-----------------------------~-------------------------------------- 221 (349)
T 4dep_C 209 RTLTVKVVGSPK-----------------------------N-------------------------------------- 221 (349)
T ss_dssp EEEEEEEECCGG-----------------------------G--------------------------------------
T ss_pred EEEEEEEEccCC-----------------------------C--------------------------------------
Confidence 000110000000 0
Q ss_pred eecCCCCCccccccccc-EEEecCCeEEEEEEEe----ccCCCeEEEEeCCeEecc-CCcEEEEe-------CC--CeEE
Q psy7040 419 ARAKKVSPYINRDQLSD-IKVRAGSNFEFDINVI----GEPIPTKEWLCNDITIIS-KDRFKIVN-------DD--KSTK 483 (716)
Q Consensus 419 ~~~~~~~P~~~~~~~~~-~~~~~g~~~~~~~~v~----~~p~~~~~W~~~~~~~~~-~~~~~~~~-------~~--~~~~ 483 (716)
..+|.+....... +.+..|..+.|.|.+. +.|.+.+.|++++..+.. ..++.+.. .+ ....
T Consensus 222 ----~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~~~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (349)
T 4dep_C 222 ----AVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQI 297 (349)
T ss_dssp ----CCSCEEC----------------CCCEEEEECCCTTCCCEEEEESSCC--------CCCCEEEECCTTCCEEEEEC
T ss_pred ----CCCCeEecCCCceeEEEecCCcEEEEEEEEEccCCCCCCEEEEEECCEEccccCCccccccceeeecCCCcEEEEE
Confidence 0011111000001 2466788889999998 578899999999987754 22221100 11 1334
Q ss_pred EEECCCCCCCc-eeEEEEEEcCCCceeeEEEEEEE
Q psy7040 484 LKVFDSKRGDS-GIYTLAVKNSWGTDKGTAKVTVL 517 (716)
Q Consensus 484 l~i~~l~~~~~-~~y~~~a~n~~g~~~~s~~~~v~ 517 (716)
|.|.++...|. |.|+|.|.|..|....++.+.+.
T Consensus 298 L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~ 332 (349)
T 4dep_C 298 LSIKKVTSEDLKRSYVCHARSAKGEVAKAAKVKQK 332 (349)
T ss_dssp C-------------CEEEEECSSCEEEEECC----
T ss_pred EEEeeccHHHcCCcEEEEEEcCCCcEEEEEEEeee
Confidence 99999999999 99999999999988877666554
No 200
>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.30 E-value=1.9e-11 Score=97.87 Aligned_cols=95 Identities=16% Similarity=0.224 Sum_probs=76.1
Q ss_pred CCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCC---CceEEEeeecCCCCeEEecCCCCCCeEEE
Q psy7040 321 PFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYS---PIWEKCAQTEGDTPKGKVLDLIEGNQYEF 397 (716)
Q Consensus 321 ~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~---~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~ 397 (716)
...+|.+|.++.+...+.+++.|+|.+|... ++.|.+|.|+|+..+. ..+... ......+.|.+|.|++.|.|
T Consensus 4 ~~~~P~~p~~l~~~~~~~~sv~l~W~~p~~~-~g~i~~Y~v~~~~~~~~~~~~~~~~---~~~~~~~~i~~L~p~t~Y~~ 79 (109)
T 2e7h_A 4 GSSGPPAVSDIRVTRSSPSSLSLAWAVPRAP-SGAVLDYEVKYHEKGAEGPSSVRFL---KTSENRAELRGLKRGASYLV 79 (109)
T ss_dssp SCCSSCCCCCCEEEEEETTEEEEECCCCCCS-SSCCCEEEEEEEETTCCSTTTSEEE---EESSSEEEEESCCTTSCEEE
T ss_pred CCCCCCCCCccEEEecCCCEEEEEeCCCCCC-CCcEeEEEEEEEECCCCCCceeEEE---ccCCCEEEECCCCCCCeEEE
Confidence 3467888999999999999999999998754 4479999999987651 223222 34567999999999999999
Q ss_pred EEEEEeCCCCCCCCCCCCceEe
Q psy7040 398 RVLAVNKGGPGEPSDPTAPHIA 419 (716)
Q Consensus 398 ~v~a~n~~g~~~~s~~~~~~~~ 419 (716)
+|+|.|..|.|.+|....+.+.
T Consensus 80 ~V~A~n~~G~g~~S~~~~~~T~ 101 (109)
T 2e7h_A 80 QVRARSEAGYGPFGQEHHSQTQ 101 (109)
T ss_dssp EEEEECSSCBCCCCSCEECCCC
T ss_pred EEEEEeCCccCCCCCCEEEEcC
Confidence 9999999999998876554443
No 201
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.30 E-value=1.9e-10 Score=112.68 Aligned_cols=125 Identities=8% Similarity=-0.001 Sum_probs=89.9
Q ss_pred eEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccCCC-eEEEE
Q psy7040 383 KGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIP-TKEWL 461 (716)
Q Consensus 383 ~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~-~~~W~ 461 (716)
.+.+......+...|+|.|.|..+....+.. .......+|.+.........+..|..+.|.|.+.|.|.+ .+.|+
T Consensus 178 ~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~----~~l~V~~~P~v~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~ 253 (313)
T 4fqp_A 178 LWILVPSSQVDGKNVTCKVEHESFEKPQLLT----VNLTVYYPPEVSISGYDNNWYLGQNEATLTCDARSNPEPTGYNWS 253 (313)
T ss_dssp EEEECCCGGGTTCEEEEEEECTTSSSCEEEE----EECCBCEEEEEEEECCCSCEETTCCCEEEEEEEEEESCCCEEEEE
T ss_pred eeeecccccccCeeEEEEEEccCcCccceee----eecccccCCccccccccceeecCCCeEEEEEEecCCCCCcEEEEE
Confidence 3566666666777899999998765432211 111222355554444455567788999999999999998 69999
Q ss_pred eCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEEEEEEE
Q psy7040 462 CNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVL 517 (716)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v~ 517 (716)
+++..+.... .. . ...|.|.++...|.|.|+|.|.|..|..+.++.+.|.
T Consensus 254 ~~~~~l~~~~--~~-~---~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 303 (313)
T 4fqp_A 254 TTMGPLPPFA--VA-Q---GAQLLIRPVDKPINTTLICNVTNALGARQAELTVQVK 303 (313)
T ss_dssp ETTBSCCTTE--EE-E---TTEEEECCCSSCCEEEEEEEEECSSCEEEEEEEEEEE
T ss_pred ECCEECCCce--EE-e---CCEEEECcCChhhCEEEEEEEEeCCCcEEEEEEEEEE
Confidence 9998875432 11 1 2379999999999999999999999988877766654
No 202
>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.30 E-value=5.4e-12 Score=101.27 Aligned_cols=99 Identities=23% Similarity=0.324 Sum_probs=79.5
Q ss_pred EEEEecCCCCCCCCeEEeEEeCCeEEEEEECCCCCC---CCc-cceEEEEEEeCCCCCeEEccccCcccceEEEcCCCCC
Q psy7040 216 EVIVLDKPSPPGGPLKVSNVHAEGVTLDWKVPDDDG---GQP-IEKYVVDKMDEATGRWTPAGETEGPVTGLEVEGLIPN 291 (716)
Q Consensus 216 ~~~v~~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~---~~~-~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~ 291 (716)
.+.+..+|.+|..| .+..+..++++|+|++|.+++ +.+ |..|.|+........|..+.. +..+.++|.+|.|+
T Consensus 9 ~~~~~~pp~~P~~p-~v~~vt~~Sv~LsW~~p~~~g~~~g~~~I~~Y~ve~~~~~~~~~~~v~~--~~~t~~~v~gL~p~ 85 (120)
T 1wfu_A 9 EPHKVVPLSKPHPP-VVGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIEEEDPKMHSYGVIYT--GYATRHVVEGLEPR 85 (120)
T ss_dssp CCTTCCCCCCCCCC-BCCCEETTEEEEECTTTSCSCCCSCGGGCCEEEEEEECTTTCCEEEEEE--ESCSEEEEESCCTT
T ss_pred EEEeeCCCCCCCCc-eeceEECCEEEEEECCCccCCccCCCCceEEEEEEEecCCCCceEEEec--CCccEEEECCCCCC
Confidence 34556778888874 677889999999999988776 666 899999965556678887755 33578999999999
Q ss_pred CeEEEEEEEEcCCCCCCCCcccceEE
Q psy7040 292 HKYKFRVRAVNKQGKSEPLTTTASIE 317 (716)
Q Consensus 292 ~~y~~~v~a~n~~g~~~~~~~~~~~~ 317 (716)
+.|.|+|+|.|..|.+.++......+
T Consensus 86 t~Y~frV~A~n~~G~s~~S~~~~~~T 111 (120)
T 1wfu_A 86 TLYKFRLKVTSPSGEYEYSPVVSVAT 111 (120)
T ss_dssp CEEEEEEEEECSSSCEEECCCEEEEC
T ss_pred CEEEEEEEEECCCCCCCCCccEeeEc
Confidence 99999999999999998777654333
No 203
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.30 E-value=1.2e-10 Score=120.35 Aligned_cols=252 Identities=13% Similarity=0.117 Sum_probs=149.6
Q ss_pred cEEEecCCeEEEEEEEeccC--CCeEEEEeCC--eEec-----------------cCCcEEEEeC--CCeEEEEECCCCC
Q psy7040 435 DIKVRAGSNFEFDINVIGEP--IPTKEWLCND--ITII-----------------SKDRFKIVND--DKSTKLKVFDSKR 491 (716)
Q Consensus 435 ~~~~~~g~~~~~~~~v~~~p--~~~~~W~~~~--~~~~-----------------~~~~~~~~~~--~~~~~l~i~~l~~ 491 (716)
.+.+..|+.+.|.|.+.+.+ .+.+.|++.. .... ...++.+..+ .....|.|.++..
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 88 (444)
T 1igt_B 9 GGLVQPGGSLKLSCATSGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQMSRLKS 88 (444)
T ss_dssp CCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTSSCEECCGGGTTTEEEEEETTTTEEEEEECSCCG
T ss_pred CeEEcCCCCEEEEEEcCCCccCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEeCCCCeEEEEECCCCH
Confidence 46789999999999998764 5789998753 2110 1235555543 3467899999999
Q ss_pred CCceeEEEEEEcCCCce---eeEEEEEEE-----EEEEEEeCCC---CCCCCceeeEEEEEEecCCCce-eeeEEEccce
Q psy7040 492 GDSGIYTLAVKNSWGTD---KGTAKVTVL-----GCSLKWNPPE---DDGGAPIEYYMVEKMETDTGKV-LIKWIRTNDK 559 (716)
Q Consensus 492 ~~~~~y~~~a~n~~g~~---~~s~~~~v~-----~v~l~W~~p~---~~~~~~i~~y~v~~~~~~~~~~-~~~w~~~~~~ 559 (716)
.|.|.|.|.|.|..+.. .....+.+. ...+.-..+. ..++.....|.+.... +.+ .+.|++.+..
T Consensus 89 ~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~---P~p~~v~W~~~~~~ 165 (444)
T 1igt_B 89 EDTAMYYCARHGGYYAMDYWGQGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYF---PEPVTLTWNSGSLS 165 (444)
T ss_dssp GGCEEEEEEEECSSSCEEEEBCCEEEEECSCCCBCCEEEEECCCSSCCCSSCEEEEEEEEEEB---SSCCEEEEGGGTBC
T ss_pred HHCEEEEEEEecCCcccccccCcEEEEecCCCCCCCceeEecccccCCCCCcEEEEEEEccee---CCCcEEEEecCCCC
Confidence 99999999999986541 122344443 1111111211 2233334455554331 122 4899877654
Q ss_pred eeeec----c-cc---ceeEEEEcCCCCCCeEEEEEEEEcCCCCCccceeeecc---------------CCCCCCcc---
Q psy7040 560 RVTID----N-VD---YFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVT---------------DKPSAPEG--- 613 (716)
Q Consensus 560 ~~~~~----~-~~---~~~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~~~~v~---------------~~p~~~~~--- 613 (716)
..... . .. ....+.|......+ +.|+|.|.|..|.......+.+. .....|..
T Consensus 166 ~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~v~~~ 244 (444)
T 1igt_B 166 SGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRGPTIKPCPPCKCPAPNLLGGPSVFIF 244 (444)
T ss_dssp TTEEECCCEEETTEEEEEEEEEECSTTTTT-SCCEEEEEETTTTEEEEEECCCCCCSCCCCCCCSCCCSCCCCCCEEEEE
T ss_pred CCeEecCccccCCcEEEEEEEEEchhhcCC-CeEEEEEEeCCCCcceEEEeccCCCCcccCCccccCCcccCCCceEEec
Confidence 21000 0 00 12457788888778 99999999998864332222110 11111210
Q ss_pred ---cee--eccceeEEEEEEeeEEEEeeeeccCceeeEEEEeCCeEeeeccc-----------ceeeEEEEccCCCCCcE
Q psy7040 614 ---PIQ--WLLTLTDVTWEISNYLQELHSSLMPISLESQYLMNDKRVTIDNV-----------DYFTKITIRPLQRSDTA 677 (716)
Q Consensus 614 ---~~~--~~~~~v~l~w~i~~y~v~~~~~~~~~~~~~~W~~~~~~~~~~~~-----------~~~~~~~i~~l~~~~~y 677 (716)
... ..+..+.|.+.+.|+.-. +-.-.+.|+++|..+..... .....|.|.++..+|.|
T Consensus 245 ~p~~~~~~~~G~~~~L~C~~~g~~~~------p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G 318 (444)
T 1igt_B 245 PPKIKDVLMISLSPIVTCVVVDVSED------DPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWMSGK 318 (444)
T ss_dssp CCCHHHHHCTTSCCEEEEEEEEECTT------CCCCEEEEEETTEECSSTTCBCCEEECSSSEEEEEEEECCHHHHHTTC
T ss_pred CCchhheeecCCCcEEEEEEeecccC------CCCeEEEEEECCccccCcccccceeCCCCcEEEEEEEEEcHHHhccCC
Confidence 111 235567777665544100 00016899999987653310 12358999999999999
Q ss_pred EEEEEEEcCCCCceeeEEE
Q psy7040 678 QYTVTATNSQGKDQVFIEV 696 (716)
Q Consensus 678 ~y~~~a~n~~G~~~~s~~l 696 (716)
.|+|.|.|..|.......+
T Consensus 319 ~Y~C~a~n~~~~~~~~~~v 337 (444)
T 1igt_B 319 EFKCKVNNKDLPAPIERTI 337 (444)
T ss_dssp EEEEEEECTTCSSCEEEEE
T ss_pred cEEEEEEcCCCCCceEEEE
Confidence 9999999999987444444
No 204
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.29 E-value=2.1e-11 Score=96.62 Aligned_cols=92 Identities=25% Similarity=0.393 Sum_probs=82.1
Q ss_pred CCcccccccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcC
Q psy7040 425 SPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNS 504 (716)
Q Consensus 425 ~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~ 504 (716)
||.|. ..+.++.+.+|+.+.|.|.+.|.|.+.+.|++++..+..+.++.+..++....|.|.++...|.|.|+|.|.|.
T Consensus 13 pP~f~-~~p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 91 (107)
T 3knb_B 13 PPCFL-RFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNA 91 (107)
T ss_dssp EEEEE-ECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCEEE-eCCCcEEEeCCCcEEEEEEEEEecCCEEEEEECcccccceeeEEEeecCceEEEEEecCChhhCEEEEEEEEEC
Confidence 55554 34567899999999999999999999999999999999889999888888899999999999999999999999
Q ss_pred CCceeeEEEEEEE
Q psy7040 505 WGTDKGTAKVTVL 517 (716)
Q Consensus 505 ~g~~~~s~~~~v~ 517 (716)
.|....++.+.|.
T Consensus 92 ~G~~~~~~~l~V~ 104 (107)
T 3knb_B 92 AGEAYAAAAVTVL 104 (107)
T ss_dssp TEEEEEEEEEEEE
T ss_pred CCEEEEEEEEEEE
Confidence 9998888777664
No 205
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.29 E-value=3.7e-09 Score=110.89 Aligned_cols=306 Identities=11% Similarity=0.059 Sum_probs=164.0
Q ss_pred CCeEEecCCCCCCeEEEEEEEEeCCC-----------CCCCCCCCCceEeecCCCCCcccccccccE-EEecCCeEEEEE
Q psy7040 381 TPKGKVLDLIEGNQYEFRVLAVNKGG-----------PGEPSDPTAPHIARAKKVSPYINRDQLSDI-KVRAGSNFEFDI 448 (716)
Q Consensus 381 ~~~~~i~~l~~~~~Y~~~v~a~n~~g-----------~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~-~~~~g~~~~~~~ 448 (716)
..++.|.++++.+...|.|.+.+..+ ..................+|.+........ .+ .+..+.|.|
T Consensus 79 ~~sL~I~~v~~~Dsg~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~-~~~~v~L~C 157 (512)
T 1zvo_C 79 QFSLNLRSMSAADTAMYYCARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPTKAPDVFPIISGCRHPK-DNSPVVLAC 157 (512)
T ss_pred EEEEEECcCCHHHCEEEEEEEECCCCccccccccccccccccCceEEEecccCCcCCeEEeccCCccccc-CCCeEEEEE
Confidence 46899999999999999999988653 001111111111112234555442111111 22 357899999
Q ss_pred EEecc-CCC-eEEEEeCCeEecc-CCcEEEEeCCC---eEEEEECCCCCCCceeEEEEEEcCCCceeeEE----------
Q psy7040 449 NVIGE-PIP-TKEWLCNDITIIS-KDRFKIVNDDK---STKLKVFDSKRGDSGIYTLAVKNSWGTDKGTA---------- 512 (716)
Q Consensus 449 ~v~~~-p~~-~~~W~~~~~~~~~-~~~~~~~~~~~---~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~---------- 512 (716)
.+.+. |.+ .+.|++++..... .........+. ...|.|.....+ .+.|+|.|.|..|......
T Consensus 158 ~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~-~g~ytC~v~n~~~~~~~~~~~~~~~~~~~ 236 (512)
T 1zvo_C 158 LITGYHPTSVTVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWR-QGEYKCVVQHTASKSKKEIFRWPESPKAQ 236 (512)
T ss_pred EEEeeecCceEEEEEcCcccCceEecCceecCCCCEEEEEEEEEcHHHcC-CceEEEEEEeCCCCceEEEecCCCCCCcC
Confidence 99876 655 8999996543210 00000111111 235788777776 8999999999988655433
Q ss_pred -EEEEE-----------------------------------------------------EEEEEEeCCCC----CCCCce
Q psy7040 513 -KVTVL-----------------------------------------------------GCSLKWNPPED----DGGAPI 534 (716)
Q Consensus 513 -~~~v~-----------------------------------------------------~v~l~W~~p~~----~~~~~i 534 (716)
.+.+. ...+.-.+|.. .+....
T Consensus 237 ~~v~l~~pp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~g~~~~ 316 (512)
T 1zvo_C 237 ASSVPTAQPQAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPAVQDLWLRDKAT 316 (512)
T ss_pred CEEEEeCCCchhccccccccCchhhccCcccccceeccCCcccccccCcccccCCCCCCCCEEEEECCChHHhccCCceE
Confidence 11111 01111222211 122333
Q ss_pred eeEEEEEEecCCCceeeeEEEccceee-eec----c--ccc----eeEEEEcCCCCCCeEEEEEEEEcCCCCCccceeee
Q psy7040 535 EYYMVEKMETDTGKVLIKWIRTNDKRV-TID----N--VDY----FTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVV 603 (716)
Q Consensus 535 ~~y~v~~~~~~~~~~~~~w~~~~~~~~-~~~----~--~~~----~~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~~~~ 603 (716)
..|.+...... ...+.|++.+.... ... . .+. ...+.|......+...|+|.|.|..+... ...+.
T Consensus 317 L~C~v~g~~P~--~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~~~~~~-~~~~~ 393 (512)
T 1zvo_C 317 FTCFVVGSDLK--DAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHPSLPPQ-RLMAL 393 (512)
T ss_pred EEEEEeceECC--CeEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEeCCCCCC-ceeEE
Confidence 44544332111 12489999876432 100 0 011 13467777777788999999999887654 33332
Q ss_pred -ccCC--CCCCccceee----ccceeE-EEEEEeeEEEEeeeeccCceeeEEEEeCCeEeeecc----------cc--ee
Q psy7040 604 -VTDK--PSAPEGPIQW----LLTLTD-VTWEISNYLQELHSSLMPISLESQYLMNDKRVTIDN----------VD--YF 663 (716)
Q Consensus 604 -v~~~--p~~~~~~~~~----~~~~v~-l~w~i~~y~v~~~~~~~~~~~~~~W~~~~~~~~~~~----------~~--~~ 663 (716)
.... +..|. +... .+..+. |.+.+.||.-. .-.+.|+++|.++.... .+ +.
T Consensus 394 ~~~~~~~~~~p~-v~~~~~~~~~~~~~~L~C~~~g~~P~--------~i~v~W~k~g~~~~~~~~~~~~~~~~~dg~~~~ 464 (512)
T 1zvo_C 394 REPAAQAPVKLS-LNLLASSDPPEAASWLLCEVSGFSPP--------NILLMWLEDQREVNTSGFAPARPPPQPGSTTFW 464 (512)
T ss_pred eecCCCCCCCCE-EEEEccCcCCCCceEEEEEEeeeCCC--------CcEEEEEECCeECcCccccccceeECCCCCEEE
Confidence 2221 22333 2222 123344 55444443110 00579999998875431 11 11
Q ss_pred --eEEEEccCCCCCcEEEEEEEEcCCCCce--eeEEEEEec
Q psy7040 664 --TKITIRPLQRSDTAQYTVTATNSQGKDQ--VFIEVVVTD 700 (716)
Q Consensus 664 --~~~~i~~l~~~~~y~y~~~a~n~~G~~~--~s~~l~v~~ 700 (716)
..|.|.....++.|.|+|.|.|...... ...+|.|..
T Consensus 465 ~~s~L~v~~~~~~~~g~YtC~v~h~~l~~~~~~~~~~~v~~ 505 (512)
T 1zvo_C 465 AWSVLRVPAPPSPQPATYTCVVSHEDSRTLLNASRSLEVSY 505 (512)
T ss_pred EEEEEEECchhcCCCCeEEEEEEecCCCCceEEEEEEEecc
Confidence 3456666666679999999999877653 444555544
No 206
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.29 E-value=1.1e-10 Score=112.95 Aligned_cols=220 Identities=12% Similarity=0.017 Sum_probs=127.7
Q ss_pred cceEEEcCCCCCCeEEEEEEEEcCCCCCCCCcccceEEecCCCCCCCCCCCc---EEEeeeCCeEEEEecCCCCCCCccc
Q psy7040 280 VTGLEVEGLIPNHKYKFRVRAVNKQGKSEPLTTTASIEAKNPFNQPGKPGTP---EIKDFDTDFVELAWTPPEQNGGSPI 356 (716)
Q Consensus 280 ~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~---~~~~~~~~~i~l~W~~p~~~~~~~i 356 (716)
...+.|.++...+.+.|+|.|.|..|..........+.+..+ ..|..+... .+....+..+.|.|... .+ .
T Consensus 50 ~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~~v~v~~p-~~~~~~~~~~~~~~~v~~G~~v~l~C~~~-~p----~ 123 (289)
T 3mjg_X 50 SSVLTLTNLTGLDTGEYFCTHNDSRGLETDERKRLYIFVPDP-TVGFLPNDAEELFIFLTEITEITIPCRVT-DP----Q 123 (289)
T ss_dssp EEEEEECSCCGGGCEEEEEECCC------CCCEEEEEECCCT-TCCBCCCCHHHHEEEESSCCCEEECCCBS-CT----T
T ss_pred eEEEEEccCChhhCEEEEEEEcccCCCCcCcEEeEEEEEECC-CcCcccCCCCcceEEeecCCeEEEEeEcC-CC----C
Confidence 468999999999999999999998775322222222222211 112111111 14445667899999874 11 1
Q ss_pred eEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccE
Q psy7040 357 VGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDI 436 (716)
Q Consensus 357 ~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~ 436 (716)
....+.+...+ .... ... .....+. .+.+...|+|.|.|..+...... . ....... .+|.+... +...
T Consensus 124 ~~v~w~~~~~~-~~~~--~~~-~~~~~~~----~~~d~G~Y~C~a~n~~~~~~s~~-~-~l~v~~~-~~p~i~~~-~~~~ 191 (289)
T 3mjg_X 124 LVVTLHEKKGD-VALP--VPY-DHQRGFS----GIFEDRSYICKTTIGDREVDSDA-Y-YVYRLQV-SSINVSVN-AVQT 191 (289)
T ss_dssp SCEEEEESSCC-SCCC--CCE-ETTTEEE----ECCCSSEEEEEEEETTEEEECCC-E-EEEECCC-CCCCCEEE-ESCS
T ss_pred ceEEEEeCCCC-Cccc--eee-cCCcCee----eeccCcEEEEEEEeCCceeeeee-E-EEEecCC-CCCCcEEe-CCcc
Confidence 12333332211 1000 000 1111222 23456788999987665432221 1 1122111 34444322 2346
Q ss_pred EEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCc-EEEEe----CCCeEEEEECCCCCCCceeEEEEEEcCCCceeeE
Q psy7040 437 KVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDR-FKIVN----DDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGT 511 (716)
Q Consensus 437 ~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~-~~~~~----~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s 511 (716)
.+..|+.+.|.|.+.+.|.+.+.|++++........ ..... ......|.|.++...|.|.|+|.|.|..|....+
T Consensus 192 ~v~~G~~v~L~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~ 271 (289)
T 3mjg_X 192 VVRQGENITLMCIVIGNEVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDHQDE 271 (289)
T ss_dssp EEETTSCEEEEEEEESCSSBEEEEECTTSSSSCCCCCEEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEEETTTTEEEE
T ss_pred eeEcCCCEEEEEEECCCCCcceEEEcCCccCCCcccccccccCCcceEEEEEEEEcccChhhCcEEEEEeecCCCCceeE
Confidence 688999999999999999999999987655432221 11111 1235689999999999999999999999999998
Q ss_pred EEEEEE
Q psy7040 512 AKVTVL 517 (716)
Q Consensus 512 ~~~~v~ 517 (716)
..+.+.
T Consensus 272 ~~l~v~ 277 (289)
T 3mjg_X 272 KAINIT 277 (289)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 888776
No 207
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.29 E-value=4.5e-11 Score=93.53 Aligned_cols=92 Identities=34% Similarity=0.630 Sum_probs=80.0
Q ss_pred CCcccccccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCC--cEEEEeCCCeEEEEECCCCCCCceeEEEEEE
Q psy7040 425 SPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKD--RFKIVNDDKSTKLKVFDSKRGDSGIYTLAVK 502 (716)
Q Consensus 425 ~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~--~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~ 502 (716)
||.|. ..+.++.+.+|+.+.|.|.+.|.|.+.+.|++++..+.... ++.+...+....|.|.++...|.|.|+|.|.
T Consensus 5 PP~i~-~~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 83 (100)
T 3knb_A 5 PPKIE-ALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLG 83 (100)
T ss_dssp EEEEC-CCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCEEE-eCCCcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEEEE
Confidence 55554 34667899999999999999999999999999999986543 5777788888899999999999999999999
Q ss_pred cCCCceeeEEEEEEE
Q psy7040 503 NSWGTDKGTAKVTVL 517 (716)
Q Consensus 503 n~~g~~~~s~~~~v~ 517 (716)
|..|..+.++.+.|.
T Consensus 84 N~~G~~~~~~~l~V~ 98 (100)
T 3knb_A 84 NEFGSDSATVNIHIR 98 (100)
T ss_dssp ETTEEEEEEEEEEEE
T ss_pred ECCCEEEEEEEEEEE
Confidence 999998888887765
No 208
>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.29 E-value=2.2e-11 Score=99.87 Aligned_cols=94 Identities=30% Similarity=0.544 Sum_probs=79.4
Q ss_pred CCCCCCCCc--EEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEE-eeecCCCCeEEecCCCCCCeEEEEE
Q psy7040 323 NQPGKPGTP--EIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKC-AQTEGDTPKGKVLDLIEGNQYEFRV 399 (716)
Q Consensus 323 ~~p~~p~~~--~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~-~~~~~~~~~~~i~~l~~~~~Y~~~v 399 (716)
..|.+|.++ .+...+.+++.|+|.+| .+++.+|.+|.|+++..+ ..|... ........++.+.+|.+++.|.|+|
T Consensus 16 ~~P~~P~~~~~~~~~~~~~sv~l~W~~p-~~~~~~i~~Y~v~~~~~~-~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV 93 (121)
T 1wf5_A 16 QLPHAPEHPVATLSTVERRAINLTWTKP-FDGNSPLIRYILEMSENN-APWTVLLASVDPKATSVTVKGLVPARSYQFRL 93 (121)
T ss_dssp CCCCCCSSCEEEECSSSTTEEEEECCCC-CCCSSCEEEEEEEEECTT-CCCEEEESSCCTTCCEEEEESCCTTCEEEEEE
T ss_pred eCCccCCCcceeeEeccCCEEEEEEcCC-CCCCCcceEEEEEEEcCC-CCceEeEcccCCCccEEEECCcCCCCEEEEEE
Confidence 568899999 78888899999999997 456668999999999876 778766 4456678899999999999999999
Q ss_pred EEEeCCCCCCCCCCCCceE
Q psy7040 400 LAVNKGGPGEPSDPTAPHI 418 (716)
Q Consensus 400 ~a~n~~g~~~~s~~~~~~~ 418 (716)
+|.|..|.|.++.....++
T Consensus 94 ~A~n~~G~s~~S~~~~~~~ 112 (121)
T 1wf5_A 94 CAVNDVGKGQFSKDTERVS 112 (121)
T ss_dssp EEEESSCEEEECCCCSCEE
T ss_pred EEEcCCccCCCcCCcceeE
Confidence 9999999998888764443
No 209
>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1
Probab=99.28 E-value=1.1e-11 Score=98.29 Aligned_cols=87 Identities=23% Similarity=0.347 Sum_probs=70.2
Q ss_pred CCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCCcEE----Eecc-cCCCeEEecCCCCCcEEEEEEEEEecC
Q psy7040 59 GPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETGVWI----PVGK-TREPEMDVTGLTPGHEYKFRVKALNKE 133 (716)
Q Consensus 59 ~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~----~~~~-~~~~~~~i~~L~~~~~y~~~v~a~~~~ 133 (716)
..+.+...+.+ +.|+|++|..++|.+|.+|.|+|+..+...|. .+.. ...++++|.+|.|++.|.|+|+|.|..
T Consensus 11 ~~~~~~~~~~~-v~l~W~~P~~~~G~pi~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~rV~A~n~~ 89 (105)
T 2haz_A 11 SIDQVEPYSST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALNGK 89 (105)
T ss_dssp EEEEEEECSSC-EEEEEECCSCCTTSCCCEEEEEEEETTCCCCEEEEEEHHHHHHHSEEEECSCCTTCEEEEEEEEEETT
T ss_pred CCCEEEEcCCc-EEEEEcCCcccCCccccEEEEEEEECCCCCCccceEEccccCCccEEEECCCCCCCEEEEEEEEEcCC
Confidence 44566666766 99999999877888899999999988776674 2221 134899999999999999999999999
Q ss_pred ccCCCccccceEE
Q psy7040 134 GESEPLETFSSII 146 (716)
Q Consensus 134 g~~~~s~~~~~~~ 146 (716)
|.+.+|......+
T Consensus 90 G~g~~S~~~~~~T 102 (105)
T 2haz_A 90 GLGEISAASEFKT 102 (105)
T ss_dssp EECCCCCCEEEEC
T ss_pred ccCCCcCCEeeEE
Confidence 9999987766544
No 210
>1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A
Probab=99.28 E-value=6.7e-11 Score=109.10 Aligned_cols=172 Identities=15% Similarity=0.118 Sum_probs=117.4
Q ss_pred CCCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCCCCCeEEcccc------CcccceEEE--cCCCCCCeEE
Q psy7040 224 SPPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEATGRWTPAGET------EGPVTGLEV--EGLIPNHKYK 295 (716)
Q Consensus 224 ~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~------~~~~~~~~i--~~L~p~~~y~ 295 (716)
..|.+ +.+.......+.++|+++.. .+.....|.+.+...+ ..|..|... ......+.+ .++..+..|.
T Consensus 22 ~~P~n-l~C~~~~~~~l~C~W~~~~~-~~~~~~~y~l~y~~~~-~~~~~C~~~~~~~~~~~~~~~C~~~~~~~~~~~~y~ 98 (227)
T 1eer_B 22 RGPEE-LLCFTERLEDLVCFWEEAAS-AGVGPGQYSFSYQLED-EPWKLCRLHQAPTARGAVRFWCSLPTADTSSFVPLE 98 (227)
T ss_dssp HSTTS-CEEEBSSSSCCEEEEEESCC-SSCCTTSEEEEEEETT-SCCEEECEEEEEETTTEEEEEEECCGGGCCBSSCEE
T ss_pred cCCcC-CeEECCCCCEEEEEecCCCC-CCCCCccEEEEEEcCC-CCceeccceeccCCCCCceEEEEeCCCcceeeEEEE
Confidence 35677 78887788899999997664 3324678999887653 335444211 112233343 5678889999
Q ss_pred EEEEEEcCCCCCCCCcccceEEecCCCCCCCCCCCcEEEeee-CCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEE
Q psy7040 296 FRVRAVNKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDFD-TDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKC 374 (716)
Q Consensus 296 ~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~-~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~ 374 (716)
|+|.|.+..+. ....+. ......|.+|.++.+.... .+.+.|+|.+|.......+..|.|.|+..+...|...
T Consensus 99 ~~V~a~~~~~~-----~~~~~~-~~~~v~p~pP~~l~~~~~~~~~~l~v~W~~P~~~~~~~~l~Yev~y~~~~~~~w~~~ 172 (227)
T 1eer_B 99 LRVTAASGAPR-----YHRVIH-INEVVLLDAPVGLVARLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGQGAGSVQR 172 (227)
T ss_dssp EEEEETTSCEE-----EEEEEC-GGGSEECCCCEEEEEEECSSTTCEEEEEECCSSCSCGGGEEEEEEEECCSSSCCCCE
T ss_pred EEEEecCCCcc-----EEEEEE-eeeeEccCcCcceEEEEcCCCCeEEEEEcCCCCcccccceEEEEEEEcCCCCCcEEE
Confidence 99999653321 111111 1122358899999988764 7899999999765322237899999998765667543
Q ss_pred eeecCCCCeEEecCCCCCCeEEEEEEEEeC
Q psy7040 375 AQTEGDTPKGKVLDLIEGNQYEFRVLAVNK 404 (716)
Q Consensus 375 ~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~ 404 (716)
.........+.|.+|.+++.|.|+|+|...
T Consensus 173 ~~~~~~~~~~~l~~L~p~t~Y~vqVRa~~~ 202 (227)
T 1eer_B 173 VEILEGRTECVLSNLRGRTRYTFAVRARMA 202 (227)
T ss_dssp EEECTTCCEEEECCCCSSCEEEEEEEEEEC
T ss_pred EEEecCceEEEEcccCCCCeEEEEEEEeEC
Confidence 333456788999999999999999999975
No 211
>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.28 E-value=8.6e-12 Score=98.76 Aligned_cols=90 Identities=22% Similarity=0.294 Sum_probs=73.4
Q ss_pred CCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEE
Q psy7040 321 PFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVL 400 (716)
Q Consensus 321 ~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~ 400 (716)
+..+|.+|..+.+. .+.+++.|+|.+ ..++|.+|.+|.|+|+..++..|......+....++.|.+|.+++.|+|+|.
T Consensus 5 p~~~P~pP~~~~~~-~~~~sv~L~W~p-~~dggsPI~~Y~I~yr~~~~~~w~~~~~~~~~~~~~~l~~L~p~t~Y~frV~ 82 (114)
T 2kbg_A 5 SMREPSPPSIHGQP-SSGKSFKLSITK-QDDGGAPILEYIVKYRSKDKEDQWLEKKVQGNKDHIILEHLQWTMGYEVQIT 82 (114)
T ss_dssp --CCCCSCCEECCB-CSTTCEEEEECC-CCCSSSCCSEEEEEEEESSCCSCCEEEEEETTTCCEEECCCCTTCCEEEEEE
T ss_pred CCCCccCCcccccc-cCCCEEEEEEEC-CCCCCCcccEEEEEEEeCCCCCcEEeEEcCCCcCEEEEcCCCCCCEEEEEEE
Confidence 33567777655433 688999999996 4578889999999999987666766666667788999999999999999999
Q ss_pred EEeCCCCCCCCC
Q psy7040 401 AVNKGGPGEPSD 412 (716)
Q Consensus 401 a~n~~g~~~~s~ 412 (716)
|.|..|.|.++.
T Consensus 83 A~N~~G~s~pS~ 94 (114)
T 2kbg_A 83 AANRLGYSEPTV 94 (114)
T ss_dssp EECTTSCEEEEE
T ss_pred EEeCCcCcCCcC
Confidence 999999998765
No 212
>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.28 E-value=3.7e-11 Score=100.71 Aligned_cols=107 Identities=18% Similarity=0.263 Sum_probs=81.5
Q ss_pred EecCCCCCCC-CCCCcEEEeeeCCeEEEEecCCC-CCCCccceEEEEEEeecCCCc--eEEEeeecCCCCeEEecCCCCC
Q psy7040 317 EAKNPFNQPG-KPGTPEIKDFDTDFVELAWTPPE-QNGGSPIVGYIIEKKEKYSPI--WEKCAQTEGDTPKGKVLDLIEG 392 (716)
Q Consensus 317 ~~~~~~~~p~-~p~~~~~~~~~~~~i~l~W~~p~-~~~~~~i~~y~v~~~~~~~~~--~~~~~~~~~~~~~~~i~~l~~~ 392 (716)
.+.+....|. +|.++.+...+.+++.|+|.+|. ...++.|.+|.|+|+..+... +...........++.|.+|.++
T Consensus 10 ~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~ 89 (134)
T 2edx_A 10 EARTAQSTPSAPPQKVMCVSMGSTTVRVSWVPPPADSRNGVITQYSVAYEAVDGEDRGRHVVDGISREHSSWDLVGLEKW 89 (134)
T ss_dssp CCSSCCSCCSSCSEEEEEECSSSSEEEEEEECCCSTTCSSCEEEEEEEEEESSSSCCCCEEECCCBTTCSEEEEESCCTT
T ss_pred EEEeCCCCCCCCCcccEEEeCCCCEEEEEecCCCccCCCCceeEEEEEEEECCCCCcccEEEEeeCCCccEEEeCCCCCC
Confidence 3444556676 78899999999999999999973 234457999999998766433 2333333567899999999999
Q ss_pred CeEEEEEEEEeCCCCCCCCCCCCceEeecCC
Q psy7040 393 NQYEFRVLAVNKGGPGEPSDPTAPHIARAKK 423 (716)
Q Consensus 393 ~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~ 423 (716)
+.|.|+|+|.|..|.|.++......+....+
T Consensus 90 t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P 120 (134)
T 2edx_A 90 TEYRVWVRAHTDVGPGPESSPVLVRTDEDVP 120 (134)
T ss_dssp CEEEEEEEEEETTBCCCCCCCEEEECCCCSS
T ss_pred CEEEEEEEEEcCCCcCCCCCCEEeecCCCCC
Confidence 9999999999999999888765555544443
No 213
>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens}
Probab=99.27 E-value=1.8e-11 Score=97.89 Aligned_cols=95 Identities=22% Similarity=0.342 Sum_probs=77.1
Q ss_pred CCCCCCCCcEEEe--eeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEE
Q psy7040 323 NQPGKPGTPEIKD--FDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVL 400 (716)
Q Consensus 323 ~~p~~p~~~~~~~--~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~ 400 (716)
..|.+|.++.+.. .+.+++.|+|.+|.. .++.|.+|.|+|+..+...|.... .....+.|.+|.+++.|.|+|+
T Consensus 6 ~~P~~P~~l~~~~~~~~~~sv~l~W~~p~~-~~g~i~~Y~v~~~~~~~~~~~~~~---~~~~~~~l~~L~p~t~Y~~~V~ 81 (108)
T 2dm4_A 6 SGPDAPRNLQLSLPREAEGVIVGHWAPPIH-THGLIREYIVEYSRSGSKMWASQR---AASNFTEIKNLLVNTLYTVRVA 81 (108)
T ss_dssp CCTTSCEEEEEECCTTCSSCEEEEEECCSC-CSSCEEEEEEEEEETTCSCCEEEE---ESSSEEEECSCCSSCEEEEEEE
T ss_pred CCCcCCcCeEEEEeccCCCEEEEEEcCCCC-CCCcEEEEEEEEEECCCCCeEEec---CCccEEEeCCCCCCCEEEEEEE
Confidence 5688899998776 578899999999874 455799999999988766776543 3467999999999999999999
Q ss_pred EEeCCCCCCCCCCCCceEeec
Q psy7040 401 AVNKGGPGEPSDPTAPHIARA 421 (716)
Q Consensus 401 a~n~~g~~~~s~~~~~~~~~~ 421 (716)
|.|..|.|.+|......+...
T Consensus 82 A~n~~G~g~~S~~~~~~T~~~ 102 (108)
T 2dm4_A 82 AVTSRGIGNWSDSKSITTIKG 102 (108)
T ss_dssp EEESSCEEEECCCEEEECCSC
T ss_pred EECCCceeCCCCCEEEECCCC
Confidence 999999998887655544333
No 214
>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.27 E-value=8e-12 Score=104.42 Aligned_cols=104 Identities=19% Similarity=0.316 Sum_probs=82.2
Q ss_pred EecCCCCCCC-CCCCcEEEeeeCCeEEEEecCCCCC-CCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCe
Q psy7040 317 EAKNPFNQPG-KPGTPEIKDFDTDFVELAWTPPEQN-GGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQ 394 (716)
Q Consensus 317 ~~~~~~~~p~-~p~~~~~~~~~~~~i~l~W~~p~~~-~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~ 394 (716)
.+.+....|. +|.++.+...+.+++.|+|.+|..+ .++.|.+|+|+|+..+...+...........++.|.+|.+++.
T Consensus 10 ~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~ 89 (132)
T 1x5h_A 10 AVRTLSDVPSAAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRKSDVTETLVSGTQLSQLIEGLDRGTE 89 (132)
T ss_dssp CCCCCCSSCCCCCEEEEEECCSSSEEEEEEECCCTTTCCSCEEEEBCEEEETTEEEEEECCBCCTTCCEEEEECCCSSCE
T ss_pred EEeCCCCCCCCCCeeeEEEeCCCCEEEEEEeCCCCcCCCceEeEEEEEEEECCCCCccEEEEeCCCccEEEeCCCCCCCE
Confidence 3444456676 6789999999999999999997653 3457999999999876444444333567789999999999999
Q ss_pred EEEEEEEEeCCCCCCCCCCCCceEee
Q psy7040 395 YEFRVLAVNKGGPGEPSDPTAPHIAR 420 (716)
Q Consensus 395 Y~~~v~a~n~~g~~~~s~~~~~~~~~ 420 (716)
|.|+|+|.|..|.|.+|......+..
T Consensus 90 Y~~~V~A~n~~G~g~~S~~~~~~T~~ 115 (132)
T 1x5h_A 90 YNFRVAALTINGTGPATDWLSAETFE 115 (132)
T ss_dssp EEEECEEEETTEEEEECCCEEEECCS
T ss_pred EEEEEEEEcCCccCCCCcCEEeEcCc
Confidence 99999999999999888776555544
No 215
>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.27 E-value=8.9e-11 Score=95.78 Aligned_cols=99 Identities=18% Similarity=0.238 Sum_probs=76.3
Q ss_pred ecCCCCCCC-CCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCc-eEEEeeecCCCCeEEecCCCCCCeE
Q psy7040 318 AKNPFNQPG-KPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPI-WEKCAQTEGDTPKGKVLDLIEGNQY 395 (716)
Q Consensus 318 ~~~~~~~p~-~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~-~~~~~~~~~~~~~~~i~~l~~~~~Y 395 (716)
..+....|. +|.++.+...+.+++.|+|.+|.. +.|.+|.|+|+..+... +...........++.|.+|.+++.|
T Consensus 11 ~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~---g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y 87 (119)
T 2ee2_A 11 INSAQDAPSEAPTEVGVKVLSSSEISVHWEHVLE---KIVESYQIRYWAAHDKEEAANRVQVTSQEYSARLENLLPDTQY 87 (119)
T ss_dssp CCCCSCCCCCCCCSCEEEEEETTEEEEECCCCSC---TTCCEEEEEEEESSSCGGGCEEEEEETTCSEEEECSCCTTCEE
T ss_pred EECCCcCCCCCCCcEEEEEccCCEEEEEecCCCC---CccceEEEEEEECCCcccCcEEEEcCCCEeEEEECCCCCCCEE
Confidence 334445565 677999999999999999999765 47999999998765322 2222334456789999999999999
Q ss_pred EEEEEEEeCCCCCCCCCCCCceEe
Q psy7040 396 EFRVLAVNKGGPGEPSDPTAPHIA 419 (716)
Q Consensus 396 ~~~v~a~n~~g~~~~s~~~~~~~~ 419 (716)
.|+|+|.|..|.|.+|....+.+.
T Consensus 88 ~~~V~A~n~~G~g~~S~~~~~~T~ 111 (119)
T 2ee2_A 88 FIEVGACNSAGCGPPSDMIEAFTK 111 (119)
T ss_dssp EEEEEEECSSSCCCCCCCEEEECC
T ss_pred EEEEEEEcCCccCCCCCCEEEECC
Confidence 999999999999998876554443
No 216
>1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A
Probab=99.27 E-value=5.6e-11 Score=109.85 Aligned_cols=177 Identities=15% Similarity=0.228 Sum_probs=111.8
Q ss_pred CCCCCceE--EEEeCCeEEEEecCCCCCCCCc-cceEEEEEEcCCC----CcEEEecccC-----CCeEEecCCCCCcEE
Q psy7040 56 DPEGPLEV--SNIHKDGCTLKWNKPKDDGGEP-LEGYLVEKYDPET----GVWIPVGKTR-----EPEMDVTGLTPGHEY 123 (716)
Q Consensus 56 ~p~~~l~~--~~~~~~s~~l~W~~p~~~~~~~-i~~y~v~~~~~~~----~~~~~~~~~~-----~~~~~i~~L~~~~~y 123 (716)
+|.+|..+ .....+++.++|+++. +++.+ ...|.|.|+..+. ..+..|.... ...+...+|.+.+.|
T Consensus 29 pP~~P~~l~C~~~~~~~~~c~W~p~~-~~~~~~~~~y~l~Y~~~~~~~~~~~~~~C~~~~~~~~~~C~~~~~~l~~~~~Y 107 (236)
T 1axi_B 29 SSGEPKFTKCRSPERETFSCHWTDEV-HHGTKNEGPIQLFYTRRNTQEWTQEWKECPDYVSAGENSCYFNSSFTSIAIPY 107 (236)
T ss_dssp ---CCCEEEEEBSSSSCEEEEECCC---------CSCEEEEEECC------CCEECSCSSTTCTTEEEECGGGCCSSSEE
T ss_pred CCCCCcCCeEEeCCCCEEEEEecCCC-CCCCCCCceEEEEEEeCCCCcCCCceeeCCCCCCCCCEEEEECCcCCcccceE
Confidence 45455434 4556679999999743 33433 2588898876543 2466765321 145667789999999
Q ss_pred EEEEEEEecCccCCCccccceEEecCCCCcccccccccceecccCCCCCCceEEEEecCCccEEEEeccccCcceEEEEE
Q psy7040 124 KFRVKALNKEGESEPLETFSSIIARDPYSKYTSVSSLDSHKRSNQPCGSGMVRKVQHLDYNTKLGVRMAQRADAGFYTVT 203 (716)
Q Consensus 124 ~~~v~a~~~~g~~~~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~G~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~ 203 (716)
.|+|.| | .+.+. .. .+..
T Consensus 108 ~~~V~a-N-~~~s~---~~-~~~~-------------------------------------------------------- 125 (236)
T 1axi_B 108 CIKLTS-N-GGTVD---EK-CFSV-------------------------------------------------------- 125 (236)
T ss_dssp EEEEEE-T-TEEEE---EE-EEEG--------------------------------------------------------
T ss_pred EEEEEE-C-CccCC---Ce-Eeec--------------------------------------------------------
Confidence 999999 7 32221 10 0000
Q ss_pred EEeCCCCceeEEEEEEecCCCCCCCCeE--EeEEeC----CeEEEEEECCCCC---CCCccceEEEEEEeCCCCCeEEcc
Q psy7040 204 AENINGKDSVEVEVIVLDKPSPPGGPLK--VSNVHA----EGVTLDWKVPDDD---GGQPIEKYVVDKMDEATGRWTPAG 274 (716)
Q Consensus 204 a~n~~g~~~~~~~~~v~~~p~~p~~~~~--~~~~~~----~~~~l~W~~p~~~---~~~~~~~y~v~~~~~~~~~~~~~~ 274 (716)
.-..+|.+|.+ +. +..... ..+.|+|++|... +|..+..|.|+|+..+...|....
T Consensus 126 --------------~~~v~p~pP~~-l~~~~~~~s~~~~~~~l~lsW~~P~~~~~~~g~~~l~Yevry~~~~~~~w~~~~ 190 (236)
T 1axi_B 126 --------------DEIVQPDPPIA-LNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNETKWKMMD 190 (236)
T ss_dssp --------------GGGBCCCCCEE-EEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTCSSCEECC
T ss_pred --------------ccccccCCCcc-cEEEEEecccCCCCceEEEEECCCCCccccCCceeeEEEEEEEECCCCceEEEe
Confidence 00136778876 64 333322 3599999988642 333478999999988877888764
Q ss_pred ccCcccceEEEcCCCCCCeEEEEEEEEcCCC--CCCCCcc
Q psy7040 275 ETEGPVTGLEVEGLIPNHKYKFRVRAVNKQG--KSEPLTT 312 (716)
Q Consensus 275 ~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g--~~~~~~~ 312 (716)
. .....+.|.+|.|++.|.|+|+|.+..| .|+++..
T Consensus 191 ~--~~~~~~~l~~L~p~t~Y~vqVRa~~~~gg~ws~WS~~ 228 (236)
T 1axi_B 191 P--ILTTSVPVYSLKVDKEYEVRVRSKQRNSGNYGEFSEV 228 (236)
T ss_dssp C--BSSSEEEEEEEETTSCEEEEEEEEETTSSCCCCCCCC
T ss_pred c--cCCCEEEEeccCCCCEEEEEEEEEECCCCCcCCCCCC
Confidence 3 3468899999999999999999999877 4544444
No 217
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.26 E-value=4.2e-10 Score=101.73 Aligned_cols=173 Identities=14% Similarity=0.154 Sum_probs=113.2
Q ss_pred EEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEEEEE
Q psy7040 436 IKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVT 515 (716)
Q Consensus 436 ~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~ 515 (716)
+.+.+|..+.|.|.+.|.|.+.+.|++...... .. .....+....|.|.++...|.|.|+|.|.|..|..+..+.+.
T Consensus 11 ~~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~-~~--~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~l~ 87 (202)
T 1vca_A 11 YLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPL-NG--KVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEKGIQVE 87 (202)
T ss_dssp EEEETTSCEEEEEEEESCSSCEEEEEETTCCCC-SS--EEEEETTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEEE
T ss_pred EEEcCCCcEEEEEeecCCCCCeEEEECCCCCCc-cc--eEEEcCCccEEEECcCCHHHCEEEEEEEEECCceEeeEEEEE
Confidence 456699999999999999999999998432110 11 122334456799999999999999999999887654444443
Q ss_pred EEEEEEEEeCCCCCCCCceeeEEEEEEecCCCceeeeEEEccceeeeeccccceeEEEEcCCCCCCeEEEEEEEEcCCCC
Q psy7040 516 VLGCSLKWNPPEDDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDNVDYFTKITIRPLQRSDTAQYTVTATNSQGK 595 (716)
Q Consensus 516 v~~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~G~ 595 (716)
|. .+|.. + .+. .. ..+..|....+.|.+....
T Consensus 88 V~------~~p~~-----~---~~~-----------------------------~~---~~~~~G~~~~L~C~~~~~~-- 119 (202)
T 1vca_A 88 IY------SFPKD-----P---EIH-----------------------------LS---GPLEAGKPITVKCSVADVY-- 119 (202)
T ss_dssp EE------BCCSC-----C---EEE-----------------------------ES---SCEETTSCEEEEEEEEEEB--
T ss_pred EE------eCCCC-----C---EeC-----------------------------Cc---eEEcCCCCEEEEEEECCcC--
Confidence 33 11210 0 000 00 2245667778888876410
Q ss_pred CccceeeeccCCCCCCccceeeccceeEEEEEEeeEEEEeeeeccCceeeEEEEeCCeEeeecc----------cceeeE
Q psy7040 596 DQVFIEVVVTDKPSAPEGPIQWLLTLTDVTWEISNYLQELHSSLMPISLESQYLMNDKRVTIDN----------VDYFTK 665 (716)
Q Consensus 596 ~~~s~~~~v~~~p~~~~~~~~~~~~~v~l~w~i~~y~v~~~~~~~~~~~~~~W~~~~~~~~~~~----------~~~~~~ 665 (716)
|.... .+.|++++..+.... ......
T Consensus 120 ------------p~~~~--------------------------------~i~W~k~~~~l~~~~~~~~~~~~~~~~~~~~ 155 (202)
T 1vca_A 120 ------------PFDRL--------------------------------EIDLLKGDHLMKSQEFLEDADRKSLETKSLE 155 (202)
T ss_dssp ------------SGGGE--------------------------------EEEEEETTEEEEEEECCSCCSSCCCEEEEEE
T ss_pred ------------CCCCe--------------------------------EEEEEeCCeECcccccccccCcCcceEEEEE
Confidence 10000 457888887765431 112345
Q ss_pred EEEccCCCCCcEEEEEEEEcCCCCc-------eeeEEEEEecCCC
Q psy7040 666 ITIRPLQRSDTAQYTVTATNSQGKD-------QVFIEVVVTDKPS 703 (716)
Q Consensus 666 ~~i~~l~~~~~y~y~~~a~n~~G~~-------~~s~~l~v~~~p~ 703 (716)
|.|.....++.|.|+|.|.|..|.. ..+..|.|..+|.
T Consensus 156 l~i~~~~~d~~g~ytC~A~n~~~~~~~~~~~~~~~~~L~V~y~P~ 200 (202)
T 1vca_A 156 VTFTPVIEDIGKVLVCRAKLHIDEMDSVPTVRQAVKELQVYISPK 200 (202)
T ss_dssp EEECCCGGGTTCEEEEEEEECSCCCTTSCSEEEEEEECCEECCC-
T ss_pred EEEEeeeccCCCeEEEEEEccccCCCCcceeEeeEEEEEEecCCC
Confidence 6788888899999999999998873 4567788888764
No 218
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.26 E-value=1.7e-11 Score=120.77 Aligned_cols=238 Identities=14% Similarity=0.167 Sum_probs=136.3
Q ss_pred CeEEEEEEEecc-C-CCeEEEEeCCeEeccCCcE--EEEeCCC---eEEEEECCCCCCCceeEEEEEEcCCCceeeEEEE
Q psy7040 442 SNFEFDINVIGE-P-IPTKEWLCNDITIISKDRF--KIVNDDK---STKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKV 514 (716)
Q Consensus 442 ~~~~~~~~v~~~-p-~~~~~W~~~~~~~~~~~~~--~~~~~~~---~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~ 514 (716)
..+.|.|.+.+. | .+.+.|++++..+...... ....++. ...|.|.....+|.|.|+|.|.|..+.....+.+
T Consensus 25 ~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~ 104 (323)
T 2wqr_A 25 PTIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDRTYTCQVTYQGHTFEDSTKK 104 (323)
T ss_dssp SEEEEEEEEEEECCCCEEEEEEETTEECCGGGEEEEEEEETTEEEEEEEEEEEHHHHHTTCCEEEEEEETTEEEEEEECC
T ss_pred CcEEEEEEEeCeECCCeEEEEEECCEEcccceecCCcCccCCcEEEEEEEEEcHHHcCCCCcEEEEEEeCCCCcceeeec
Confidence 689999999886 3 4689999999887644321 1112211 1256677766778999999999987754433221
Q ss_pred EEE----EEEEEEeCCC----CCCCCceeeEEEEEEe-cCCCceeeeEEEcc-ceeeeec-----ccc----ceeEEEEc
Q psy7040 515 TVL----GCSLKWNPPE----DDGGAPIEYYMVEKME-TDTGKVLIKWIRTN-DKRVTID-----NVD----YFTKITIR 575 (716)
Q Consensus 515 ~v~----~v~l~W~~p~----~~~~~~i~~y~v~~~~-~~~~~~~~~w~~~~-~~~~~~~-----~~~----~~~~~~i~ 575 (716)
.+. ...+.-.+|. ..++.....|.+.... .+ ....+.|++.+ ....... ..+ ....+.|.
T Consensus 105 ~~~~~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p-~~~~i~W~k~~g~~~~~~~~~~~~~~~g~~~~~~~L~I~ 183 (323)
T 2wqr_A 105 CADSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSK-GTVQLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPVG 183 (323)
T ss_dssp CCCSSGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECCCS-SCCEEEEEETTCCCCCCCCCEEEECTTSCEEEEEEEECC
T ss_pred CCCCCCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCCCC-CceEEEEEECCCcccccccCCCccCCCCCEEEEEEEEEC
Confidence 000 1222222332 1233334556554432 11 00149999864 2221100 000 12368888
Q ss_pred CCCCCCeEEEEEEEEcCCCCCccceeeecc-CCCCCCcccee-------eccceeEEEEEEeeEEEEeeeeccCceeeEE
Q psy7040 576 PLQRSDTAQYTVTATNSQGKDQVFIEVVVT-DKPSAPEGPIQ-------WLLTLTDVTWEISNYLQELHSSLMPISLESQ 647 (716)
Q Consensus 576 ~L~~~~~y~~~v~a~n~~G~~~~s~~~~v~-~~p~~~~~~~~-------~~~~~v~l~w~i~~y~v~~~~~~~~~~~~~~ 647 (716)
+++..+.+.|+|.|.|..+.......+... .....|. +.. +.+..+.|.+.+.|+.-. .-.+.
T Consensus 184 ~~~~~D~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~-v~~~~~~~~~~~g~~~~l~C~~~g~~p~--------~~~v~ 254 (323)
T 2wqr_A 184 TRDWIEGETYQCRVTHPHLPRALMRSTTKTSGPRAAPE-VYAFATPEWPGSRDKRTLACLIQNFMPE--------DISVQ 254 (323)
T ss_dssp HHHHHTTCCEEEEEECTTSSSCEEEEECCCCSCCBCCE-EEEEECCCCTTCTTEEEEEEEEEEEBSS--------CCEEE
T ss_pred HHHccCCCCEEEEEECCCCCCCeeeEEEccCCCCCCCE-EEEeCCChHHhcCCcEEEEEEeeeeeCC--------CcEEE
Confidence 888999999999999987433222222211 1222222 211 114455555443332100 00689
Q ss_pred EEeCCeEeeecc----------c---ceeeEEEEccCCCCCcEEEEEEEEcCCCC
Q psy7040 648 YLMNDKRVTIDN----------V---DYFTKITIRPLQRSDTAQYTVTATNSQGK 689 (716)
Q Consensus 648 W~~~~~~~~~~~----------~---~~~~~~~i~~l~~~~~y~y~~~a~n~~G~ 689 (716)
|+++|..+.... . .....|.|..+..+|.|.|+|.|.|..+.
T Consensus 255 W~k~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 309 (323)
T 2wqr_A 255 WLHNEVQLPDARHSTTQPRKTKGSGFFVFSRLEVTRAEWEQKDEFICRAVHEAAS 309 (323)
T ss_dssp EEETTEECCGGGEEECCCEECSSSSEEEEEEEEEEHHHHHHCCCEEEEEECTTST
T ss_pred EEECCEECCCCceeecCcccCCCCcEEEEEEEEEChHHccCCCEEEEEEEeCCCC
Confidence 999999875431 0 11256899999999999999999999887
No 219
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.26 E-value=2.4e-11 Score=117.94 Aligned_cols=229 Identities=12% Similarity=0.044 Sum_probs=137.4
Q ss_pred EecCCccEEEEeccccCcceEEEEEEEeCCCCceeEEEEEEecCCCCCC-CCeEEeEEeCCeEEEEEECCCCCCCCccce
Q psy7040 179 QHLDYNTKLGVRMAQRADAGFYTVTAENINGKDSVEVEVIVLDKPSPPG-GPLKVSNVHAEGVTLDWKVPDDDGGQPIEK 257 (716)
Q Consensus 179 ~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~~p~-~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~ 257 (716)
...+....|.|.+++..|+|.|+|.|.|..|..+..+.|.|..+|.+.. .+.......+..+.|.|.... ..+...
T Consensus 45 ~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~l~C~~~~---~~~~~~ 121 (292)
T 4dkd_C 45 YSDGSSSILSTNNATFQNTGTYRCTEPGDPLGGSAAIHLYVKDPARPWNVLAQEVVVFEDQDALLPCLLTD---PVLEAG 121 (292)
T ss_dssp CCBTTEEEEEESSCCGGGCSCEEECCCC----CCEEECCEECCSSCCEEESCSEEEEETTSCEECCEEESS---GGGGSS
T ss_pred eccCceEEEEEcccccccCEEEEEEEccCCCCcceEEEEEEcCccccccccCCeEEEcCCCcEEEeeeCCC---CCccee
Confidence 3344567999999999999999999999999989999999988775411 112445567889999999642 111122
Q ss_pred EEEEEEeCC---CCCeEEccccCcccceEEEcCCCCCCeEEEEEEEEcCCCCCCCCcccceEEecCCCCCCCCCCCcEEE
Q psy7040 258 YVVDKMDEA---TGRWTPAGETEGPVTGLEVEGLIPNHKYKFRVRAVNKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIK 334 (716)
Q Consensus 258 y~v~~~~~~---~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~ 334 (716)
+.+...... ....... .....+.|.++...+.+.|+|.|.|..|.... .
T Consensus 122 v~W~~~~~~~~~~~~~~~~----~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s-~----------------------- 173 (292)
T 4dkd_C 122 VSLVRVRGRPLMRHTNYSF----SPWHGFTIHRAKFIQSQDYQCSALMGGRKVMS-I----------------------- 173 (292)
T ss_dssp EEEEEGGGCCCCSSCCEEC----CSSSCCEETTCCGGGCSEEEEEECSTTSCEEC-C-----------------------
T ss_pred EEEEecCCCccccCCcccc----cCCceEEECCCCHHHCeEEEEEEEeCCCceeE-E-----------------------
Confidence 333322111 1111111 11344899999999999999999875442100 0
Q ss_pred eeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCC
Q psy7040 335 DFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPT 414 (716)
Q Consensus 335 ~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~ 414 (716)
.+.|.-.... .
T Consensus 174 -----~~~l~V~~~~--~-------------------------------------------------------------- 184 (292)
T 4dkd_C 174 -----SIRLKVQKVI--P-------------------------------------------------------------- 184 (292)
T ss_dssp -----CEEEEEECCC--C--------------------------------------------------------------
T ss_pred -----EEEEEEeCCC--C--------------------------------------------------------------
Confidence 0001000000 0
Q ss_pred CceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccCC-CeEEEEeCCeEeccCCcEEEEeCC--CeEEEEECCCCC
Q psy7040 415 APHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPI-PTKEWLCNDITIISKDRFKIVNDD--KSTKLKVFDSKR 491 (716)
Q Consensus 415 ~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~-~~~~W~~~~~~~~~~~~~~~~~~~--~~~~l~i~~l~~ 491 (716)
.+|.+.. .+....+..|..+.|.|.+.+.|. ..+.|++++..+............ ....|.|.++..
T Consensus 185 ---------~~p~i~~-~~~~~~~~~g~~v~l~C~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~ 254 (292)
T 4dkd_C 185 ---------GPPALTL-VPAELVRIRGEAAQIVCSASSVDVNFDVFLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVDF 254 (292)
T ss_dssp ---------SSCEEEE-ESSCBCCCSSSCEEEEEEEEESSSCCEEECCBSSCCCCCCBEEEEETTEEEEEEEEEESSCCT
T ss_pred ---------CCCeEEc-cCCceeEecCCCEEEEEEecCCCCceEEEEeCCCcccccCccceeccceeeeEEEEEECccCh
Confidence 0000000 000112346777888999887665 467888888765433332222111 234899999999
Q ss_pred CCceeEEEEEEcCCCceeeEEEEEEE
Q psy7040 492 GDSGIYTLAVKNSWGTDKGTAKVTVL 517 (716)
Q Consensus 492 ~~~~~y~~~a~n~~g~~~~s~~~~v~ 517 (716)
.|.|.|+|.|.|..|..+.+..+.|.
T Consensus 255 ~d~G~Y~C~a~N~~g~~~~~~~l~V~ 280 (292)
T 4dkd_C 255 QHAGNYSCVASNVQGKHSTSMFFRVV 280 (292)
T ss_dssp TSCEEEEEEEECSSCEEEEEEEECC-
T ss_pred hcCeEEEEEEecCCCCceeEEEEEEe
Confidence 99999999999999998888777665
No 220
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.25 E-value=2.7e-10 Score=102.25 Aligned_cols=174 Identities=21% Similarity=0.374 Sum_probs=109.8
Q ss_pred cccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEecc--CCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceee
Q psy7040 433 LSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIIS--KDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKG 510 (716)
Q Consensus 433 ~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~--~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~ 510 (716)
+....+..|+.+.|.|.+.+.|.+.+.|++++..+.. ..++.+.. ...|.|.++...|.|.|+|.+.|..+....
T Consensus 9 ~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~---~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~ 85 (189)
T 2v5t_A 9 VSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLA---NNNLQILNINKSDEGIYRCEGRVEARGEID 85 (189)
T ss_dssp CSSEEEETTSCEEECCEEECSSCCEEEEEC-----CBCCCTTEEECT---TSCEEETTCCGGGCEEEEEEEEETTTTEEE
T ss_pred CCCEEEeCCCcEEEEEEEcCCCCCEEEEEECCccceeccCCeEEEec---CCCEEEeeCCHhHCcEEEEEEEEcCCCceE
Confidence 3457899999999999999999999999999887653 33333322 236999999999999999999987754332
Q ss_pred EEEEEEEEEEEEEeCCCCCCCCceeeEEEEEEecCCCceeeeEEEccceeeeeccccceeEEEEcCCCCCCeEEEEEEEE
Q psy7040 511 TAKVTVLGCSLKWNPPEDDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDNVDYFTKITIRPLQRSDTAQYTVTAT 590 (716)
Q Consensus 511 s~~~~v~~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~ 590 (716)
...+.+. +.- +|. . .... ... ...+..|....+.|.+.
T Consensus 86 ~~~~~l~---v~~-~p~-----------------------~---~~~~-----------~~~-~~~~~~g~~v~l~C~~~ 123 (189)
T 2v5t_A 86 FRDIIVI---VNV-PPA-----------------------I---SMPQ-----------KSF-NATAERGEEMTFSCRAS 123 (189)
T ss_dssp EEEEEEE---EEE-EEE-----------------------E---ECSC-----------CEE-EEETTSCCCEEEECEEE
T ss_pred EEEEEEE---ecC-CCC-----------------------c---cccc-----------ccc-cccccCCCcEEEEEEEc
Confidence 2111111 000 000 0 0000 000 01133444555555542
Q ss_pred cCCCCCccceeeeccCCCCCCccceeeccceeEEEEEEeeEEEEeeeeccCceeeEEEEeCCeEeeecc----cceeeEE
Q psy7040 591 NSQGKDQVFIEVVVTDKPSAPEGPIQWLLTLTDVTWEISNYLQELHSSLMPISLESQYLMNDKRVTIDN----VDYFTKI 666 (716)
Q Consensus 591 n~~G~~~~s~~~~v~~~p~~~~~~~~~~~~~v~l~w~i~~y~v~~~~~~~~~~~~~~W~~~~~~~~~~~----~~~~~~~ 666 (716)
. . | +. .+.|+++|..+.... ......|
T Consensus 124 g---~------------p--~~--------------------------------~v~W~~~g~~~~~~~~~~~~~~~~~L 154 (189)
T 2v5t_A 124 G---S------------P--EP--------------------------------AISWFRNGKLIEENEKYILKGSNTEL 154 (189)
T ss_dssp E---E------------S--CC--------------------------------EEEEEETTEECCCSSSEEEETTTTEE
T ss_pred c---C------------C--CC--------------------------------eEEEEECCEECcCCCcEEEecCCCEE
Confidence 1 0 0 00 568899888776541 1223679
Q ss_pred EEccCCCCCcEEEEEEEEcCCCCceeeEEEEEec
Q psy7040 667 TIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTD 700 (716)
Q Consensus 667 ~i~~l~~~~~y~y~~~a~n~~G~~~~s~~l~v~~ 700 (716)
.|.++...|+|.|+|.|.|..|....+..|.|..
T Consensus 155 ~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~v 188 (189)
T 2v5t_A 155 TVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFV 188 (189)
T ss_dssp EECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEcCCChhhCeeEEEEEEeCCCceeEEEEEEEEe
Confidence 9999999999999999999999999888888763
No 221
>4doh_B Interleukin-20 receptor subunit beta; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}
Probab=99.25 E-value=2.5e-10 Score=102.65 Aligned_cols=179 Identities=16% Similarity=0.139 Sum_probs=123.1
Q ss_pred CCCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEe-----CCCCCeEEcccc-CcccceEEEcC-CCCCCeEEE
Q psy7040 224 SPPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMD-----EATGRWTPAGET-EGPVTGLEVEG-LIPNHKYKF 296 (716)
Q Consensus 224 ~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~-----~~~~~~~~~~~~-~~~~~~~~i~~-L~p~~~y~~ 296 (716)
.+|.+ +.+..... ...|+|+++... + ....|.++++. .+...|...... ......+.|.+ +..+..|.+
T Consensus 8 p~P~n-v~~~s~n~-~~iL~W~p~~~~-~-~~~~Y~V~y~~~~~~~~~~~~W~~~~~C~~i~~~~Cdlt~~~~~~~~Y~~ 83 (206)
T 4doh_B 8 PAPQQ-LSVLSTNM-KHLLMWSPVIAP-G-ETVYYSVEYQGEYESLYTSHIWIPSSWCSLTEGPECDVTDDITATVPYNL 83 (206)
T ss_dssp CCCCC-CEEEEETT-EEEEECCCCCCS-S-SCCEEEEEEEEHHHHHHSTTCCEEEEEEEEESSSEEECTTTCCSSSCEEE
T ss_pred CCCCe-eEEEEeCC-EEEEEECCCCCC-C-CCEEEEEEEEEeccccCCCccceecccccCCCCCEEcCCccccCCCCEEE
Confidence 34676 77776544 589999976432 2 34789999984 356778764322 24567888885 777889999
Q ss_pred EEEEEcCCCCCCCCcccceEEecCCCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEee
Q psy7040 297 RVRAVNKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQ 376 (716)
Q Consensus 297 ~v~a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~ 376 (716)
||+|.+..+.|.++......... ...+++|. +.+. ....+|.|.|.+| +.+..|.|.|...++........
T Consensus 84 RVrA~~~~~~S~w~~~~~f~~~~--~t~i~PP~-v~v~-~~~~~i~V~~~~p-----~~~l~Y~v~y~~~~~~~~~~~~~ 154 (206)
T 4doh_B 84 RVRATLGSQTSAWSILKHPFNRQ--STILTRPG-MEIT-KDGFHLVIELEDL-----GPQFEFLVAYWRREPGAEEHVKM 154 (206)
T ss_dssp EEEEEETTEECCCEECSSCBCGG--GCBCCCCC-EEEE-EETTEEEEEECCC-----CTTCEEEEEEEESSSSCCCEEEE
T ss_pred EEEEEcCCCccCccccccccchh--hcccCCCe-EEEE-eCCCEEEEEecCC-----CCcEEEEEEEEEcCCCceeEEeE
Confidence 99999988877665544332221 12344444 7776 5788999999986 25779999998766443222222
Q ss_pred ecCCCCeEEecCCCCCCeEEEEEEEEeCC--CCCCCCCCCC
Q psy7040 377 TEGDTPKGKVLDLIEGNQYEFRVLAVNKG--GPGEPSDPTA 415 (716)
Q Consensus 377 ~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~--g~~~~s~~~~ 415 (716)
.......+.|.+|.|++.|.|+|+|.... +.|..|....
T Consensus 155 ~~~~~~~~~i~~L~p~t~Ycv~Vra~~~~~~~~g~~S~~~C 195 (206)
T 4doh_B 155 VRSGGIPVHLETMEPGAAYCVKAQTFVKAIGRYSAFSQTEC 195 (206)
T ss_dssp ECCSSSEEEEEECCSSSCEEEEEEEEEGGGTEECCCCCCEE
T ss_pred EccCCeEEEEeCCCCCCcEEEEEEEEecCCCCCCCCCCCEe
Confidence 33446789999999999999999999853 6666665433
No 222
>3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens}
Probab=99.25 E-value=1.1e-10 Score=91.75 Aligned_cols=86 Identities=16% Similarity=0.143 Sum_probs=71.9
Q ss_pred CCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEE
Q psy7040 323 NQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAV 402 (716)
Q Consensus 323 ~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~ 402 (716)
..+.+|.++.+...+.+++.|+|.+|... ++.+.+|.|.|...+...+...........+++|.+|.|++.|.|+|+|.
T Consensus 6 t~~~~P~~l~v~~~t~~Sv~lsW~~p~~~-~g~i~~Y~v~y~~~~~~~~~~~~~v~~~~ts~~l~~L~p~t~Y~~~V~A~ 84 (103)
T 3t04_D 6 SVSSVPTKLEVVDATPTSLKISWDAYYSS-WQNVKYYRITYGETGGDSPVQEFTVPGYYSTATISGLKPGVDYTITVYAY 84 (103)
T ss_dssp CCCCCCCSCEEEEEETTEEEEECTTTTTT-SCCCCEEEEEEEETTCSSCCEEEEEETTCCEEEECSCCTTCCEEEEEEEE
T ss_pred ccCCCCceeEEEecCCCEEEEEccCCCCC-CCccceEEEEEEECCCCCccEEEEcCCCcCEEEeCCCCCCCEEEEEEEEE
Confidence 46788999999999999999999998754 44799999999987533333344456678999999999999999999999
Q ss_pred eC--CCCCC
Q psy7040 403 NK--GGPGE 409 (716)
Q Consensus 403 n~--~g~~~ 409 (716)
|. .|.++
T Consensus 85 ~~~~~G~~~ 93 (103)
T 3t04_D 85 DTFFPGYEP 93 (103)
T ss_dssp SCCCTTCCC
T ss_pred eCCCCCCCC
Confidence 99 88776
No 223
>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.24 E-value=3.5e-11 Score=96.27 Aligned_cols=96 Identities=22% Similarity=0.238 Sum_probs=77.4
Q ss_pred CCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEE
Q psy7040 321 PFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVL 400 (716)
Q Consensus 321 ~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~ 400 (716)
...+|.+|.++.+...+.+++.|+|.+|...++ .|.+|.|+|+..+...|... .......++.|.+|.|++.|.|+|+
T Consensus 4 ~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~g-~i~~Y~v~~~~~~~~~~~~~-~~~~~~~~~~l~~L~p~t~Y~~~V~ 81 (108)
T 2djs_A 4 GSSGPSTVPIMHQVSATMRSITLSWPQPEQPNG-IILDYEIRYYEKEHNEFNSS-MARSQTNTARIDGLRPGMVYVVQVR 81 (108)
T ss_dssp CCCCCCCCSCCEEEEECSSEEEEECCCCSCCSS-CEEEEEEEEEETTSCSTTCE-EEEESSSEEEEESCCTTCEEEEEEE
T ss_pred CCCCCCCCcceEEEecCCCEEEEEECCCCCCCC-eEEEEEEEEEECCCCCccee-EEecCccEEEEcCCCCCCEEEEEEE
Confidence 446788999999999999999999999865444 69999999988764443221 2345778999999999999999999
Q ss_pred EEeCCCCCCCCCCCCceE
Q psy7040 401 AVNKGGPGEPSDPTAPHI 418 (716)
Q Consensus 401 a~n~~g~~~~s~~~~~~~ 418 (716)
|.|..|.|.+|....+.+
T Consensus 82 A~n~~G~g~~S~~~~~~T 99 (108)
T 2djs_A 82 ARTVAGYGKFSGKMCFQT 99 (108)
T ss_dssp EEESSCEEEECCCEEEEC
T ss_pred EEeCCEECCCCCCEEEEe
Confidence 999999998887654443
No 224
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.24 E-value=4.9e-11 Score=109.45 Aligned_cols=125 Identities=17% Similarity=0.125 Sum_probs=79.6
Q ss_pred EEEEcCCCCCCeEEEEEEEEcCCCCC-ccceeeeccCCCC----CCccceeeccceeEEEEEEeeEEEEeeeeccCc-ee
Q psy7040 571 KITIRPLQRSDTAQYTVTATNSQGKD-QVFIEVVVTDKPS----APEGPIQWLLTLTDVTWEISNYLQELHSSLMPI-SL 644 (716)
Q Consensus 571 ~~~i~~L~~~~~y~~~v~a~n~~G~~-~~s~~~~v~~~p~----~~~~~~~~~~~~v~l~w~i~~y~v~~~~~~~~~-~~ 644 (716)
.+.+.++...+.+.|+|.|.|..|.. .....+.|...|. .+.......+..+. |.|.+ .|
T Consensus 73 ~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~~~~~~~~~g~~~~--------------l~C~~~~~ 138 (212)
T 2v9r_A 73 RIVHGRKSRPDEGVYVCVARNYLGEAVSHDASLEVAILRDDFRQNPSDVMVAVGEPAV--------------MECQPPRG 138 (212)
T ss_dssp SCCCCSSCCCSCEEEEEEEEETTEEEECCCEEEEECEECSSCSBCCCCEEEETTSCEE--------------EECBCCCE
T ss_pred EEEecCCCcccCeEEEEEEECCCCceeecceEEEEEeccccceeCCCceEecCCCcEE--------------EEEecCCC
Confidence 34456778899999999999988754 2333344432221 11101112233333 66766 44
Q ss_pred ----eEEEEeCCeEeeeccc---ceeeEEEEccCCCCCcEEEEEEEEcCCCCcee-eEEEEEecCCCCCCCCe
Q psy7040 645 ----ESQYLMNDKRVTIDNV---DYFTKITIRPLQRSDTAQYTVTATNSQGKDQV-FIEVVVTDKPSAPEGPI 709 (716)
Q Consensus 645 ----~~~W~~~~~~~~~~~~---~~~~~~~i~~l~~~~~y~y~~~a~n~~G~~~~-s~~l~v~~~p~~p~~p~ 709 (716)
.+.|++++..+..... .....|.|.++...|.|.|+|.|.|..|.... .+.|.|..+|.....|.
T Consensus 139 ~p~~~v~W~~~~~~l~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~V~~~P~~~~~P~ 211 (212)
T 2v9r_A 139 HPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVKAAA 211 (212)
T ss_dssp ESCCEEEEEETTEEECTTSTTEEEETTEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC---------
T ss_pred CCCCEEEEEECCccCCCCcceEEccCCeEEEeeCCHhhCeeEEEEEecccCceecceEEEEEEeCchHhhhcc
Confidence 8999999998875421 12358999999999999999999999998755 48999999988776653
No 225
>2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1
Probab=99.24 E-value=2.4e-11 Score=97.57 Aligned_cols=93 Identities=25% Similarity=0.450 Sum_probs=69.5
Q ss_pred CCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeec-CCCceEEEeeec-----------CCCCeEEecCCC
Q psy7040 323 NQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEK-YSPIWEKCAQTE-----------GDTPKGKVLDLI 390 (716)
Q Consensus 323 ~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~-~~~~~~~~~~~~-----------~~~~~~~i~~l~ 390 (716)
.+|++|. +..++.+++.|+|.+|..++ .+|.+|.|+++.. ....|..+.... ....++++.+|.
T Consensus 4 ~pP~~P~---v~~~~~~sv~L~W~~P~~~G-~pI~~Y~Ve~r~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~ 79 (115)
T 2ic2_A 4 YPPTPPN---VTRLSDESVMLRWMVPRNDG-LPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLK 79 (115)
T ss_dssp CCCCCCE---EEECC---EEEEEEEECCSS-CCEEEEEEEEEECC---CCEEEEEEEECCSCSCSSSSEEEEEEEECSCC
T ss_pred CCCCcCE---eEEEeCCEEEEEEcCCCCCC-CCCceEEEEEEECCCCCCceECcccccccccccccccCceeEEEeCCCC
Confidence 4566665 67788999999999987654 7899999999987 456787665322 234578999999
Q ss_pred CCCeEEEEEEEEeCCCCCCCCCCCCceEe
Q psy7040 391 EGNQYEFRVLAVNKGGPGEPSDPTAPHIA 419 (716)
Q Consensus 391 ~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~ 419 (716)
+++.|.|+|+|.|..|.+.+|..+..+..
T Consensus 80 p~t~Y~FRV~A~N~~G~~~pS~~S~~~~~ 108 (115)
T 2ic2_A 80 PQHTYRFRILAVYSNNDNKESNTSAKFYL 108 (115)
T ss_dssp SSEEEEEEEEEEETTSCEEECCCCCCEEE
T ss_pred CCCEEEEEEEEEeCCCCCCCCCCCCCEEe
Confidence 99999999999999999888877665554
No 226
>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens}
Probab=99.24 E-value=4.8e-11 Score=97.54 Aligned_cols=105 Identities=23% Similarity=0.388 Sum_probs=76.9
Q ss_pred cCCCCCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCCCCCeEEcc---ccCcccceEEEcCCCCCCeEEEE
Q psy7040 221 DKPSPPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEATGRWTPAG---ETEGPVTGLEVEGLIPNHKYKFR 297 (716)
Q Consensus 221 ~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~---~~~~~~~~~~i~~L~p~~~y~~~ 297 (716)
+.|.+|.+ +.+.....+ +.|+|++|..++|.++.+|.|+++......|.... ......+.+.|.+|.|++.|.|+
T Consensus 6 ~~P~~P~~-~~~~~~~~t-v~l~W~~P~~~~G~pI~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~r 83 (122)
T 2e3v_A 6 SGPSSPSI-DQVEPYSST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVR 83 (122)
T ss_dssp CCCCCCEE-EEEEECSSC-EEEEEECCCCC--CCEEEEEEEEEETTCCSCEEEEEEHHHHHTTTEEEECSCCTTCEEEEE
T ss_pred cCCcCCCc-cEEEecCCc-EEEEECCCCcCCCCcceEEEEEEEECCCCCcccceeeeeecCccceEEeCCCCCCCEEEEE
Confidence 56777776 677766666 99999999888887899999999988877783221 11245689999999999999999
Q ss_pred EEEEcCCCCCCCCcccceEEecCCCCCCCCCC
Q psy7040 298 VRAVNKQGKSEPLTTTASIEAKNPFNQPGKPG 329 (716)
Q Consensus 298 v~a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~ 329 (716)
|+|.|..|.+.++..... ...+..+|.+|.
T Consensus 84 V~A~n~~G~g~~S~~~~~--~t~~~~~P~~P~ 113 (122)
T 2e3v_A 84 LAALNGKGLGEISAASEF--KTQPVREPSAPK 113 (122)
T ss_dssp EEEEETTEECCCCCCEEE--ECCCCCCCC---
T ss_pred EEEEeCCccCCCcccccc--cccCCCCCCCCe
Confidence 999999999988776543 223334566554
No 227
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.24 E-value=1.7e-10 Score=104.63 Aligned_cols=162 Identities=15% Similarity=0.260 Sum_probs=112.6
Q ss_pred ccEEEecCCeEEEEEEEe-ccCCCeEEEEeCCeEeccCCcEEEEeCC--CeEEEEECCCCCCCceeEEEEEEcCCCceee
Q psy7040 434 SDIKVRAGSNFEFDINVI-GEPIPTKEWLCNDITIISKDRFKIVNDD--KSTKLKVFDSKRGDSGIYTLAVKNSWGTDKG 510 (716)
Q Consensus 434 ~~~~~~~g~~~~~~~~v~-~~p~~~~~W~~~~~~~~~~~~~~~~~~~--~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~ 510 (716)
.++.+.+|..+.|.|.+. +.|.+.+.|++++..+..+.++.+..+. ....|.|.++.+.|.|.|+|.|.| |....
T Consensus 10 ~~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~N--g~a~~ 87 (207)
T 3rbs_A 10 LAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQD--GKATN 87 (207)
T ss_dssp EEEEECGGGCEEEEEECSCCCSCCEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEE--TTEEE
T ss_pred CceEEEeCCeEEEEEEEecCCCCCEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEC--CCeEE
Confidence 357889999999999996 4799999999999999888888777654 566899999999999999999999 44433
Q ss_pred EEEEEEE--------------------------EEEEEEeCCCCCCCCceeeEEEEEEecCC-CceeeeEEEccceeeee
Q psy7040 511 TAKVTVL--------------------------GCSLKWNPPEDDGGAPIEYYMVEKMETDT-GKVLIKWIRTNDKRVTI 563 (716)
Q Consensus 511 s~~~~v~--------------------------~v~l~W~~p~~~~~~~i~~y~v~~~~~~~-~~~~~~w~~~~~~~~~~ 563 (716)
...+.+. ...+.... ..+......|.+ .+. +.|.+.|++.+......
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~v--~~g~~v~l~C~v----~g~~P~p~i~W~k~g~~l~~~ 161 (207)
T 3rbs_A 88 HSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEV--TGECNVLLKCKV----ANIKKETHIVWYKDEREISVD 161 (207)
T ss_dssp EEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEEEEEE--ETTTEEEEEEEE----ESCCTTCEEEEEETTEEECCC
T ss_pred EEEEEEEccchhhhcccccccccccccCCCCceEecCCcEE--cCCCcEEEEEEE----eCCCCCCEEEEEECCEECCCC
Confidence 3322110 00111111 112222233333 333 45669999987765432
Q ss_pred c---cccceeEEEEcCCCCCCeEEEEEEEEcCCCCCccceeee
Q psy7040 564 D---NVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVV 603 (716)
Q Consensus 564 ~---~~~~~~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~~~~ 603 (716)
. .......+.|.++.+.+.+.|+|.|.|..|....+..+.
T Consensus 162 ~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~ 204 (207)
T 3rbs_A 162 EKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLV 204 (207)
T ss_dssp CCCCCSSEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEEC
T ss_pred CceEcCCCEEEEEECCCCcccCEEEEEEEEcCCCEEEEEEEEe
Confidence 1 122335799999999999999999999999766655443
No 228
>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.24 E-value=1.6e-11 Score=101.56 Aligned_cols=118 Identities=31% Similarity=0.488 Sum_probs=87.6
Q ss_pred ceeEEEEEEecCCCCCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCC--CCCeEEccccCcccceEEEcCC
Q psy7040 211 DSVEVEVIVLDKPSPPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEA--TGRWTPAGETEGPVTGLEVEGL 288 (716)
Q Consensus 211 ~~~~~~~~v~~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~--~~~~~~~~~~~~~~~~~~i~~L 288 (716)
.+..+.+.+.++|.+|.+ +.+.....+++.|+|.+| .+++.++.+|.|+++... ...|..+....+.... .+.+|
T Consensus 5 ~s~~~~~~v~~~P~~P~~-~~~~~~~~~sv~l~W~p~-~~~~~~i~~Y~v~~~~~~~~~~~w~~~~~~~~~~~~-~i~~L 81 (127)
T 1uey_A 5 SSGPTPAPVYDVPNPPFD-LELTDQLDKSVQLSWTPG-DDNNSPITKFIIEYEDAMHKPGLWHHQTEVSGTQTT-AQLNL 81 (127)
T ss_dssp CCCCCCCCCCCSCCCCEE-EEEECCSSSCEEEEEECC-CCCSSCEEEEEEEEEBTTTCTTCEEEEEEEESSCCE-EEECC
T ss_pred CcEEEEEEeecCCcCCCC-cEEEEccCCEEEEEEECC-CCCCCCceEEEEEEEECCCCCCccEEEeeeCCCceE-EEecC
Confidence 345566777889999988 788888899999999976 446668999999998753 4678766544333444 57799
Q ss_pred CCCCeEEEEEEEEcCCCCCCCCcccceEEecCCCCCCC-CCCCcEE
Q psy7040 289 IPNHKYKFRVRAVNKQGKSEPLTTTASIEAKNPFNQPG-KPGTPEI 333 (716)
Q Consensus 289 ~p~~~y~~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p~-~p~~~~~ 333 (716)
.|++.|.|+|+|.|..|.+.++.....+. +....|. +|.++.+
T Consensus 82 ~p~t~Y~frV~A~n~~G~s~~S~~~~~~~--T~~~~P~~~P~~v~~ 125 (127)
T 1uey_A 82 SPYVNYSFRVMAVNSIGKSLPSEASEQYL--TKASEPDKNPTSGPS 125 (127)
T ss_dssp CTTCEECCEEEEEESSCBCCCCSCCCCEE--CCCSSCSSCSSCCCC
T ss_pred CCCCEEEEEEEEEeCCccCCccccccceE--cCCCCCCCCCceeEe
Confidence 99999999999999999998887742232 2334554 5766654
No 229
>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.24 E-value=1.1e-11 Score=98.23 Aligned_cols=76 Identities=22% Similarity=0.248 Sum_probs=63.1
Q ss_pred EeCCeEEEEecCCCCCCCCccceEEEEEEcCCCCcEEEec--ccCCCeEEecCCCCCcEEEEEEEEEecCccCCCcccc
Q psy7040 66 IHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETGVWIPVG--KTREPEMDVTGLTPGHEYKFRVKALNKEGESEPLETF 142 (716)
Q Consensus 66 ~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~--~~~~~~~~i~~L~~~~~y~~~v~a~~~~g~~~~s~~~ 142 (716)
.+.+++.|+|.++ .++|.+|.+|.|+|+..++..|.... ....++++|.+|.|++.|+|||.|.|..|.|.++...
T Consensus 19 ~~~~sv~L~W~p~-~dggsPI~~Y~I~yr~~~~~~w~~~~~~~~~~~~~~l~~L~p~t~Y~frV~A~N~~G~s~pS~~~ 96 (114)
T 2kbg_A 19 SSGKSFKLSITKQ-DDGGAPILEYIVKYRSKDKEDQWLEKKVQGNKDHIILEHLQWTMGYEVQITAANRLGYSEPTVYE 96 (114)
T ss_dssp CSTTCEEEEECCC-CCSSSCCSEEEEEEEESSCCSCCEEEEEETTTCCEEECCCCTTCCEEEEEEEECTTSCEEEEEEE
T ss_pred cCCCEEEEEEECC-CCCCCcccEEEEEEEeCCCCCcEEeEEcCCCcCEEEEcCCCCCCEEEEEEEEEeCCcCcCCcCCE
Confidence 5889999999965 47889999999999987666554322 2345789999999999999999999999999988643
No 230
>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.24 E-value=4.7e-11 Score=95.14 Aligned_cols=93 Identities=24% Similarity=0.335 Sum_probs=76.9
Q ss_pred CCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEE
Q psy7040 323 NQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAV 402 (716)
Q Consensus 323 ~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~ 402 (716)
..|.+|.++.+...+.+++.|+|.+|...++ .+.+|+|+|+..+...|.... ....++.|.+|.+++.|.|+|+|.
T Consensus 6 ~~P~~P~~l~~~~~~~~si~l~W~~p~~~~g-~i~~Y~v~~~~~~~~~~~~~~---~~~~~~~i~~L~p~t~Y~~~V~A~ 81 (106)
T 2ed8_A 6 SGPGPVENLQAVSTSPTSILITWEPPAYANG-PVQGYRLFCTEVSTGKEQNIE---VDGLSYKLEGLKKFTEYSLRFLAY 81 (106)
T ss_dssp CCCCCCEEEEEECSSTTEEEEEEECCSSCSS-CCCEEEEEEEETTTCCEEEEE---ECSSCEEEESCCTTCEEEEEEEEE
T ss_pred CCCcCCceeEEEecCCCEEEEEECCCCCCCC-CeeEEEEEEEECCCCceEEEe---CCccEEEECCCCCCCEEEEEEEEE
Confidence 6788999999999999999999999875444 799999999987766665443 346899999999999999999999
Q ss_pred eCCCCCCCCCCCCceEe
Q psy7040 403 NKGGPGEPSDPTAPHIA 419 (716)
Q Consensus 403 n~~g~~~~s~~~~~~~~ 419 (716)
|..|.|.++......+.
T Consensus 82 n~~G~g~~S~~~~~~T~ 98 (106)
T 2ed8_A 82 NRYGPGVSTDDITVVTL 98 (106)
T ss_dssp CSSCEEEECCCEEEECC
T ss_pred eCCccCCCcCCEEEEcC
Confidence 99999887766544443
No 231
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.23 E-value=2.1e-10 Score=114.03 Aligned_cols=245 Identities=12% Similarity=0.154 Sum_probs=139.6
Q ss_pred cEEEecCCeEEEEEEEeccC--CCeEEEEeC--CeEe-----------------ccCCcEEEEeC--CCeEEEEECCCCC
Q psy7040 435 DIKVRAGSNFEFDINVIGEP--IPTKEWLCN--DITI-----------------ISKDRFKIVND--DKSTKLKVFDSKR 491 (716)
Q Consensus 435 ~~~~~~g~~~~~~~~v~~~p--~~~~~W~~~--~~~~-----------------~~~~~~~~~~~--~~~~~l~i~~l~~ 491 (716)
.+.+..|+.+.|.|.+.+.+ .+.+.|+++ +..+ ....++.+..+ .....|.|.++..
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 88 (344)
T 1za6_B 9 AEVVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELSSLRS 88 (344)
T ss_dssp CEEECTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEECSCCG
T ss_pred CeEEeCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEECCCCc
Confidence 46789999999999998873 678999986 3221 01345655543 3567899999999
Q ss_pred CCceeEEEEEEcCCCceeeEEEEEEE-----EEEEEEeCCC---CCCCCceeeEEEEEEecCCCceeeeEEEccceeeee
Q psy7040 492 GDSGIYTLAVKNSWGTDKGTAKVTVL-----GCSLKWNPPE---DDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTI 563 (716)
Q Consensus 492 ~~~~~y~~~a~n~~g~~~~s~~~~v~-----~v~l~W~~p~---~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~ 563 (716)
.|.|.|.|.|.|..+.......+.+. ...+.-.++. ..+......|.+...... .+.+.|++.+......
T Consensus 89 ~D~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~--~~~v~W~k~g~~~~~~ 166 (344)
T 1za6_B 89 EDTAVYFCTRSLNMAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPE--PVTVSWNSGALTSGVH 166 (344)
T ss_dssp GGCEEEEEEETTTTCEECCCEEEEECSSCCBCCEEEEECCSCTTTSSSEEEEEEEEEEEBSS--CCCEEETTTTBCTTEE
T ss_pred ccCEEEEEEEecCcceecCcEEEEEecCCCCCCeEEEccccccccCCCcEEEEEEEeeEECC--CeEEEEecCCccCcee
Confidence 99999999999965544444455554 1112211221 222333445555543111 1239998876532100
Q ss_pred c-----ccc----ceeEEEEcCCCCCCeEEEEEEEEcCCCCCccceeee--c-------------------cCCCCCCcc
Q psy7040 564 D-----NVD----YFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVV--V-------------------TDKPSAPEG 613 (716)
Q Consensus 564 ~-----~~~----~~~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~~~~--v-------------------~~~p~~~~~ 613 (716)
. ..+ ....+.|......+ +.|+|.|.|..|.......+. + ......|.
T Consensus 167 ~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~P~- 244 (344)
T 1za6_B 167 TFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCGGGSSGGGSGGQPREPQ- 244 (344)
T ss_dssp ECCCEECTTSCEEEEEEEEEETTHHHH-BCEEEEEEEGGGTEEEEEEECCCCC--------------------CCBCCE-
T ss_pred ECCCeECCCCCEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCccceEeecccccccccccCCCCCCccccccCCCCcCCE-
Confidence 0 000 11357777777666 999999999887543222221 0 01111122
Q ss_pred ce-------eeccceeEEEEEEeeEEEEeeeeccCceeeEEEEeCCeEeeecc--------cce---eeEEEEccCCCCC
Q psy7040 614 PI-------QWLLTLTDVTWEISNYLQELHSSLMPISLESQYLMNDKRVTIDN--------VDY---FTKITIRPLQRSD 675 (716)
Q Consensus 614 ~~-------~~~~~~v~l~w~i~~y~v~~~~~~~~~~~~~~W~~~~~~~~~~~--------~~~---~~~~~i~~l~~~~ 675 (716)
+. .+....+.|.+.+.|+.-. .-.+.|+++|..+.... .+. ...+.|.....++
T Consensus 245 v~~~~~~~~~~~~~~~~L~C~~~g~~P~--------~~~v~W~k~g~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~ 316 (344)
T 1za6_B 245 VYTLPPSRDELTKNQVSLTCLVKGFYPS--------DIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQ 316 (344)
T ss_dssp EEEECCCGGGGGSSSEEEEEEEEEEBSS--------CCEEEEESSSSCCCSEEECCCEECTTSCEEEEEEEEECHHHHHT
T ss_pred EEEeCCChHhccCCcEEEEEEEeeEECC--------CeEEEEEECCeECCCcEecceEECCCCcEEEEEEEEEChHHccC
Confidence 11 1123345555444332100 00689999998775330 111 1345565555567
Q ss_pred cEEEEEEEEcCCCCce
Q psy7040 676 TAQYTVTATNSQGKDQ 691 (716)
Q Consensus 676 ~y~y~~~a~n~~G~~~ 691 (716)
.|.|+|.|.|......
T Consensus 317 ~g~YtC~a~~~~l~~~ 332 (344)
T 1za6_B 317 GNVFSCSVMHEALHNH 332 (344)
T ss_dssp TCEEEEEEECTTSTTS
T ss_pred CCeEEEEEEcCCCCCC
Confidence 9999999999766543
No 232
>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.23 E-value=5.5e-11 Score=97.75 Aligned_cols=105 Identities=18% Similarity=0.241 Sum_probs=80.5
Q ss_pred CCCCCCCCcccceEEecCCCC------CCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEee
Q psy7040 303 KQGKSEPLTTTASIEAKNPFN------QPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQ 376 (716)
Q Consensus 303 ~~g~~~~~~~~~~~~~~~~~~------~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~ 376 (716)
..|.+.++... .+.++.. +|.+|.++.+.... +++.|+|.+|...+ +.|.+|.|+|+... ..+. ...
T Consensus 3 ~~G~g~~S~~~---~~~T~~~~~~~~~~P~~P~~l~~~~~~-~sv~l~W~~P~~~~-g~i~~Y~v~y~~~~-~~~~-~~~ 75 (126)
T 1x5i_A 3 SGSSGPATDWL---SAETFESDLDETRVPEVPSSLHVRPLV-TSIVVSWTPPENQN-IVVRGYAIGYGIGS-PHAQ-TIK 75 (126)
T ss_dssp SCCCCCCCCCC---CSCCCCTTSBCSSCCCSCSEEEEEEET-TEEEEEEECCSCTT-BCCCEEEEEECSSC-GGGE-EEE
T ss_pred CCccCCCCCCE---EeECccccCccCCCCCCCCeeEEEecC-CEEEEEEcCCCCCC-CCEeEEEEEEEcCC-CCce-EEE
Confidence 45666666554 3334444 88999999999886 99999999987554 57999999998432 2322 233
Q ss_pred ecCCCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCC
Q psy7040 377 TEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPT 414 (716)
Q Consensus 377 ~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~ 414 (716)
......+++|.+|.+++.|.|+|+|.|..|.|.++...
T Consensus 76 ~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~~ 113 (126)
T 1x5i_A 76 VDYKQRYYTIENLDPSSHYVITLKAFNNVGEGIPLYES 113 (126)
T ss_dssp CCTTCCEEEECSCCSSCEECCEEEEECSSCBCCCCCCC
T ss_pred eCCCeeEEEEeCCCCCCEEEEEEEEEeCCccCcceeeE
Confidence 45778899999999999999999999999999887643
No 233
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.23 E-value=2.7e-11 Score=120.17 Aligned_cols=226 Identities=15% Similarity=0.142 Sum_probs=115.0
Q ss_pred cceEEEcCCCCCCeEEEEEEEEcCCCCCCCCcccceEEecCCC-------------------CCCC--CCCC---cEEEe
Q psy7040 280 VTGLEVEGLIPNHKYKFRVRAVNKQGKSEPLTTTASIEAKNPF-------------------NQPG--KPGT---PEIKD 335 (716)
Q Consensus 280 ~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~~~~~~~~~~~~~~-------------------~~p~--~p~~---~~~~~ 335 (716)
...+.|.++...+.+.|+|.|.|. |....... +.+.... .+|. .|.. -....
T Consensus 60 ~~~L~i~~v~~~D~G~Y~C~a~n~-~~~~~~~~---l~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v 135 (334)
T 1ry7_B 60 PQRLQVLNASHEDSGAYSCRQRLT-QRVLCHFS---VRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAV 135 (334)
T ss_dssp ---------------------------------------------------------------CCCCSCCTTCCCCEEEE
T ss_pred cceEEEeecccccCEEEEEEEEeC-CeEEEEEE---EEEeccCccccccccccccccccccCCCCEEeccccccceeEEe
Confidence 468999999999999999999997 43211111 1111100 0111 1111 12333
Q ss_pred eeCCeEEEEecCCCCCCCccceEEEEEEeecCCCc----eEEEeeecCCCCeEEecCCCCCCeEEEEEEEEeCCCCCCCC
Q psy7040 336 FDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPI----WEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPS 411 (716)
Q Consensus 336 ~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~----~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s 411 (716)
..+..+.|.|..... +.. .+.|...+..- .............+.|.++...+.+.|+|.|.|..|....+
T Consensus 136 ~~g~~v~l~C~~~g~----p~~--~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~ 209 (334)
T 1ry7_B 136 PAANTVRFRCPAAGN----PTP--SISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQT 209 (334)
T ss_dssp ETTCCEEEECCCCCS----SCC--EEECCBTTBCCCTTSSTTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEE
T ss_pred cCCCcEEEEEEccCC----CCC--eEEEEECCEECcccccccceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEE
Confidence 456778888876322 122 23343322100 00001112345679999999999999999999988753211
Q ss_pred CCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccCCCeEEEEe----CCeEeccCCcE--EEEe-------C
Q psy7040 412 DPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLC----NDITIISKDRF--KIVN-------D 478 (716)
Q Consensus 412 ~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~----~~~~~~~~~~~--~~~~-------~ 478 (716)
.........+.+|.+....+....+..|..+.|.|.+.+.|.+.+.|++ ++..+...... .+.. +
T Consensus 210 --~~l~V~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 287 (334)
T 1ry7_B 210 --YTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTD 287 (334)
T ss_dssp --EEEEEECCCCSSCBCCTTCSCCEEEESSCCEEECCCCBCSSCEEEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSC
T ss_pred --EEEEEecCCCCCCceEecCCCceEEeCCCCEEEEEEEecCCCCeEEEEECCcCCCccccCCCCeeEEEeecCcccccc
Confidence 1111122223345554444567889999999999999999999999999 56555433221 1111 1
Q ss_pred CCeEEEEECCCCCCCceeEEEEEEcCCCceeeEEEEEEE
Q psy7040 479 DKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVL 517 (716)
Q Consensus 479 ~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v~ 517 (716)
.....|.|.++...|.|.|+|.|.|..|....++.+.+.
T Consensus 288 ~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 326 (334)
T 1ry7_B 288 KELEVLSLHNVTFEDAGEYTCLAGNSIGFSHHSAWLVVL 326 (334)
T ss_dssp TTCCCEEECSCCTTSCSEEEEEEEESSCCEEEEEEEEEE
T ss_pred ccccEEEEccCCHHHCEEEEEEEeCCCCeEEEEEEEEEE
Confidence 122479999999999999999999999998888777665
No 234
>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.23 E-value=6.5e-11 Score=96.38 Aligned_cols=97 Identities=31% Similarity=0.480 Sum_probs=79.9
Q ss_pred CCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecC-CCceEEEeeecCCCCeEEecCCCCCCeEEEEE
Q psy7040 321 PFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKY-SPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRV 399 (716)
Q Consensus 321 ~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~-~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v 399 (716)
....|.+|.++.+...+.+++.|+|.+|. +++.++.+|.|+++..+ ...|..... ......+.+.+|.+++.|.|+|
T Consensus 12 ~~~~P~~P~~~~~~~~~~~sv~l~W~~p~-~~~~~i~~Y~v~~~~~~~~~~~~~~~~-~~~~~~~~i~~L~p~t~Y~frV 89 (117)
T 1uem_A 12 LSDLPGPPSKPQVTDVTKNSVTLSWQPGT-PGTLPASAYIIEAFSQSVSNSWQTVAN-HVKTTLYTVRGLRPNTIYLFMV 89 (117)
T ss_dssp SCCSCBCCCCCEEEEECSSCEEEECCCCB-CSSSCCCEEEEEEEETTTEEEEEEEEE-EECSSEEEECSCCTTCEEEEEE
T ss_pred CCCCccCCCCCEEEEecCCEEEEEEeCCC-CCCcCceEEEEEEEECCCCCceeEccc-ccCcCEEEECCCCCCCEEEEEE
Confidence 34678899999999999999999999977 55668999999998764 455665432 3467889999999999999999
Q ss_pred EEEeCCCCCCCCCCCCceEe
Q psy7040 400 LAVNKGGPGEPSDPTAPHIA 419 (716)
Q Consensus 400 ~a~n~~g~~~~s~~~~~~~~ 419 (716)
+|.|..|.+.++.....+..
T Consensus 90 ~A~n~~G~s~~S~~~~~v~t 109 (117)
T 1uem_A 90 RAINPQGLSDPSPMSDPVRT 109 (117)
T ss_dssp EEEETTEEEEECCCCCCEEC
T ss_pred EEECCCccCCCcCCCccEEc
Confidence 99999999988887764443
No 235
>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.23 E-value=9.6e-11 Score=96.88 Aligned_cols=92 Identities=32% Similarity=0.547 Sum_probs=75.9
Q ss_pred CCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecC--CCceEEEeeecCCCCeEEecCCCCCCeEEEEEE
Q psy7040 323 NQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKY--SPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVL 400 (716)
Q Consensus 323 ~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~ 400 (716)
.+|.+|.++.+...+.+++.|+|.+| .+++.+|.+|.|+++... ...|............ .+.+|.+++.|.|+|+
T Consensus 15 ~~P~~P~~~~~~~~~~~sv~l~W~p~-~~~~~~i~~Y~v~~~~~~~~~~~w~~~~~~~~~~~~-~i~~L~p~t~Y~frV~ 92 (127)
T 1uey_A 15 DVPNPPFDLELTDQLDKSVQLSWTPG-DDNNSPITKFIIEYEDAMHKPGLWHHQTEVSGTQTT-AQLNLSPYVNYSFRVM 92 (127)
T ss_dssp CSCCCCEEEEEECCSSSCEEEEEECC-CCCSSCEEEEEEEEEBTTTCTTCEEEEEEEESSCCE-EEECCCTTCEECCEEE
T ss_pred cCCcCCCCcEEEEccCCEEEEEEECC-CCCCCCceEEEEEEEECCCCCCccEEEeeeCCCceE-EEecCCCCCEEEEEEE
Confidence 67889999999999999999999986 456678999999998754 3568766655555555 5779999999999999
Q ss_pred EEeCCCCCCCCCCCCc
Q psy7040 401 AVNKGGPGEPSDPTAP 416 (716)
Q Consensus 401 a~n~~g~~~~s~~~~~ 416 (716)
|.|..|.|.++.....
T Consensus 93 A~n~~G~s~~S~~~~~ 108 (127)
T 1uey_A 93 AVNSIGKSLPSEASEQ 108 (127)
T ss_dssp EEESSCBCCCCSCCCC
T ss_pred EEeCCccCCccccccc
Confidence 9999999999887533
No 236
>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.23 E-value=4.4e-11 Score=96.65 Aligned_cols=87 Identities=20% Similarity=0.369 Sum_probs=72.2
Q ss_pred CCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEE
Q psy7040 323 NQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAV 402 (716)
Q Consensus 323 ~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~ 402 (716)
.+|.+|.++++...+ +++.|+|.+|...+ +.|.+|.|+|+... .+...........+++|.+|.+++.|.|+|+|.
T Consensus 16 ~~P~~P~~l~~~~~~-~sv~l~W~~P~~~n-g~i~gY~i~y~~~~--~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~ 91 (116)
T 2edb_A 16 QVPDQPSSLHVRPQT-NCIIMSWTPPLNPN-IVVRGYIIGYGVGS--PYAETVRVDSKQRYYSIERLESSSHYVISLKAF 91 (116)
T ss_dssp SCCCCCSCEEEEECS-SCEEEEECCCSCTT-BCCCEEEEEEEESS--TTSEEEEEETTCCEEEECSCCSSSBEEEEEEEE
T ss_pred CCCCCCCCeEEEECC-CEEEEEEcCCCCCC-CceeEEEEEEEeCC--CCeEEEEeCCCeeEEEeCCCCCCCEEEEEEEEE
Confidence 678899999999888 99999999987664 47999999998643 233334445778899999999999999999999
Q ss_pred eCCCCCCCCCC
Q psy7040 403 NKGGPGEPSDP 413 (716)
Q Consensus 403 n~~g~~~~s~~ 413 (716)
|..|.|.++..
T Consensus 92 n~~G~g~~~~~ 102 (116)
T 2edb_A 92 NNAGEGVPLYE 102 (116)
T ss_dssp ETTEECSCEEE
T ss_pred eCCccCCCCcc
Confidence 99999986543
No 237
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.23 E-value=2.1e-10 Score=93.41 Aligned_cols=111 Identities=22% Similarity=0.310 Sum_probs=90.4
Q ss_pred CCCCCCCCCCceEeecCCCCCcccc--cccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEE
Q psy7040 406 GPGEPSDPTAPHIARAKKVSPYINR--DQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTK 483 (716)
Q Consensus 406 g~~~~s~~~~~~~~~~~~~~P~~~~--~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~ 483 (716)
|.|.++.....+.......+|.+.. .....+.+..|+.+.|.|.+.+.|.+.+.|++++..+. ..++.+........
T Consensus 2 G~s~p~~~~~~v~~~~v~~~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~-~~~~~~~~~~~~~~ 80 (118)
T 2e7c_A 2 SSGSSGTLAQPVTIREIAEPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLD-TSRVHVRTSDFDTV 80 (118)
T ss_dssp CCCCCCCCCCCCCCCCCSEEEEECCCTTTSSCEEEESSSCEEEEEEEEEESCCEEEEEETTEECC-CSSCEEEECSSEEE
T ss_pred CcCCccccCCCEEEEeeccCCeEecCcccCCCEEEECCCEEEEEEEEccCCCCEEEEEECCEECC-CCcEEEEECCCeEE
Confidence 5666776666665556566777742 24567899999999999999999999999999999886 45566666777788
Q ss_pred EEECCCCCCCceeEEEEEEcCCCceeeEEEEEEE
Q psy7040 484 LKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVL 517 (716)
Q Consensus 484 l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v~ 517 (716)
|.|.++...|.|.|+|.|.|..|.....+.+.+.
T Consensus 81 L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V~ 114 (118)
T 2e7c_A 81 FFVRQAARSDSGEYELSVQIENMKDTATIRIRVV 114 (118)
T ss_dssp EEESSCCTTTCEEEEEEEECSSCEECCEEEEEEE
T ss_pred EEECCCChhcCEEEEEEEEeCCCeEEEEEEEEEE
Confidence 9999999999999999999999988877776654
No 238
>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.23 E-value=7.8e-11 Score=94.22 Aligned_cols=92 Identities=17% Similarity=0.308 Sum_probs=72.6
Q ss_pred CCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCCcE-EEecccCCCeEEecCCCCCcEEEEEEEEEecCc
Q psy7040 56 DPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETGVW-IPVGKTREPEMDVTGLTPGHEYKFRVKALNKEG 134 (716)
Q Consensus 56 ~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~-~~~~~~~~~~~~i~~L~~~~~y~~~v~a~~~~g 134 (716)
.+|..|.+..++.+++.|+|++|...+| .|.+|+|+|+..+...| ........+++.|.+|.|++.|.|+|+|.|..|
T Consensus 9 ~~P~~l~~~~~~~~sv~l~W~~p~~~~g-~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G 87 (108)
T 2djs_A 9 STVPIMHQVSATMRSITLSWPQPEQPNG-IILDYEIRYYEKEHNEFNSSMARSQTNTARIDGLRPGMVYVVQVRARTVAG 87 (108)
T ss_dssp CCCSCCEEEEECSSEEEEECCCCSCCSS-CEEEEEEEEEETTSCSTTCEEEEESSSEEEEESCCTTCEEEEEEEEEESSC
T ss_pred CCCcceEEEecCCCEEEEEECCCCCCCC-eEEEEEEEEEECCCCCcceeEEecCccEEEEcCCCCCCEEEEEEEEEeCCE
Confidence 3556688889999999999999975444 59999999987765433 122234458999999999999999999999999
Q ss_pred cCCCccccceEEec
Q psy7040 135 ESEPLETFSSIIAR 148 (716)
Q Consensus 135 ~~~~s~~~~~~~~~ 148 (716)
.+.+|......+..
T Consensus 88 ~g~~S~~~~~~T~~ 101 (108)
T 2djs_A 88 YGKFSGKMCFQTLT 101 (108)
T ss_dssp EEEECCCEEEECCC
T ss_pred ECCCCCCEEEEeCC
Confidence 99988776665543
No 239
>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.23 E-value=2.2e-11 Score=98.85 Aligned_cols=100 Identities=19% Similarity=0.266 Sum_probs=79.0
Q ss_pred EecCCCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEE
Q psy7040 317 EAKNPFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYE 396 (716)
Q Consensus 317 ~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~ 396 (716)
.+.+...+|.+|.++.+...+.+++.|+|.+|.. + .+.+|.|+|+..+...|... .......+.|.+|.+++.|.
T Consensus 10 ~~~t~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~--~-~i~~Y~v~~~~~~~~~~~~~--~~~~~~~~~i~~L~p~t~Y~ 84 (115)
T 1x5z_A 10 QVITQTGVPGQPLNFKAEPESETSILLSWTPPRS--D-TIANYELVYKDGEHGEEQRI--TIEPGTSYRLQGLKPNSLYY 84 (115)
T ss_dssp CCCCCSCCCCCCEEEEEECSSSSEEEEEEECCSC--C-CCCEEEECBEESSSCCCBCC--EECSSSEEEEECCCTTCEEE
T ss_pred EEECCCCCCCCCccCEeeeCCCCEEEEEEcCCCC--C-CccEEEEEEEeCCCCCceEE--ecCCCcEEEECCCCCCCeEE
Confidence 3344556788999999999999999999999754 2 68999999998765555322 23456899999999999999
Q ss_pred EEEEEEeCCCCCCCCCCCCceEeec
Q psy7040 397 FRVLAVNKGGPGEPSDPTAPHIARA 421 (716)
Q Consensus 397 ~~v~a~n~~g~~~~s~~~~~~~~~~ 421 (716)
|+|+|.|..|.|.++......+...
T Consensus 85 ~~V~A~n~~G~g~~S~~~~~~T~~~ 109 (115)
T 1x5z_A 85 FRLAARSPQGLGASTAEISARTMQS 109 (115)
T ss_dssp ECEEEECSSCEEEECCCEEEECCCC
T ss_pred EEEEEECCCcccCCCcCEEEecCCC
Confidence 9999999999998887665554443
No 240
>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.23 E-value=6.5e-11 Score=95.67 Aligned_cols=86 Identities=19% Similarity=0.273 Sum_probs=67.9
Q ss_pred CCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCCcEEEecccCCCeEEecCCCCCcEEEEEEEEEecCcc
Q psy7040 56 DPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETGVWIPVGKTREPEMDVTGLTPGHEYKFRVKALNKEGE 135 (716)
Q Consensus 56 ~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~~~~g~ 135 (716)
.||..|++...+ +++.|+|++|...+ +.|.+|+|+|+......+........++++|.+|.+++.|.|+|+|.|..|.
T Consensus 19 ~~P~~l~~~~~~-~sv~l~W~~P~~~n-g~i~gY~i~y~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~ 96 (116)
T 2edb_A 19 DQPSSLHVRPQT-NCIIMSWTPPLNPN-IVVRGYIIGYGVGSPYAETVRVDSKQRYYSIERLESSSHYVISLKAFNNAGE 96 (116)
T ss_dssp CCCSCEEEEECS-SCEEEEECCCSCTT-BCCCEEEEEEEESSTTSEEEEEETTCCEEEECSCCSSSBEEEEEEEEETTEE
T ss_pred CCCCCeEEEECC-CEEEEEEcCCCCCC-CceeEEEEEEEeCCCCeEEEEeCCCeeEEEeCCCCCCCEEEEEEEEEeCCcc
Confidence 456668888888 99999999997654 4599999999864433343333445689999999999999999999999999
Q ss_pred CCCccccc
Q psy7040 136 SEPLETFS 143 (716)
Q Consensus 136 ~~~s~~~~ 143 (716)
+.++....
T Consensus 97 g~~~~~~~ 104 (116)
T 2edb_A 97 GVPLYESA 104 (116)
T ss_dssp CSCEEECC
T ss_pred CCCCccee
Confidence 98765443
No 241
>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.23 E-value=4e-11 Score=97.65 Aligned_cols=93 Identities=26% Similarity=0.511 Sum_probs=76.2
Q ss_pred CCCCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCC-CCcEEEecc-cCCCeEEecCCCCCcEEEEEEEEEe
Q psy7040 54 GLDPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPE-TGVWIPVGK-TREPEMDVTGLTPGHEYKFRVKALN 131 (716)
Q Consensus 54 ~~~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~-~~~~~~~~~-~~~~~~~i~~L~~~~~y~~~v~a~~ 131 (716)
.+.||..+.+...+.+++.|+|++|. +++.++.+|+|+|+..+ ...|..+.. ...+.+.|.+|.+++.|.|+|+|.|
T Consensus 15 ~P~~P~~~~~~~~~~~sv~l~W~~p~-~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~frV~A~n 93 (117)
T 1uem_A 15 LPGPPSKPQVTDVTKNSVTLSWQPGT-PGTLPASAYIIEAFSQSVSNSWQTVANHVKTTLYTVRGLRPNTIYLFMVRAIN 93 (117)
T ss_dssp SCBCCCCCEEEEECSSCEEEECCCCB-CSSSCCCEEEEEEEETTTEEEEEEEEEEECSSEEEECSCCTTCEEEEEEEEEE
T ss_pred CccCCCCCEEEEecCCEEEEEEeCCC-CCCcCceEEEEEEEECCCCCceeEcccccCcCEEEECCCCCCCEEEEEEEEEC
Confidence 34566678888999999999999987 56677999999998764 567776543 3468999999999999999999999
Q ss_pred cCccCCCccccceEEe
Q psy7040 132 KEGESEPLETFSSIIA 147 (716)
Q Consensus 132 ~~g~~~~s~~~~~~~~ 147 (716)
..|.+.++.....+..
T Consensus 94 ~~G~s~~S~~~~~v~t 109 (117)
T 1uem_A 94 PQGLSDPSPMSDPVRT 109 (117)
T ss_dssp TTEEEEECCCCCCEEC
T ss_pred CCccCCCcCCCccEEc
Confidence 9999988877764433
No 242
>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.23 E-value=3.3e-11 Score=99.07 Aligned_cols=103 Identities=19% Similarity=0.307 Sum_probs=78.4
Q ss_pred cCCCCCCC-CCCCcEEEeeeCCeEEEEecCCCCC-CCccceEEEEEEeecCCCceEEEe----eecCCCCeEEecCCCCC
Q psy7040 319 KNPFNQPG-KPGTPEIKDFDTDFVELAWTPPEQN-GGSPIVGYIIEKKEKYSPIWEKCA----QTEGDTPKGKVLDLIEG 392 (716)
Q Consensus 319 ~~~~~~p~-~p~~~~~~~~~~~~i~l~W~~p~~~-~~~~i~~y~v~~~~~~~~~~~~~~----~~~~~~~~~~i~~l~~~ 392 (716)
.+....|. +|.++.+...+.+++.|+|.+|..+ .++.|.+|.|+|+..+...|.... ........+.|.+|.++
T Consensus 9 ~T~~~~P~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~ 88 (122)
T 1va9_A 9 STEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKF 88 (122)
T ss_dssp CSSCCCCSSCCEEEEEEECSSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSCBCCBCCCCSSEEEEEEESCCSS
T ss_pred ECCCCCCCCCCcceEEEeccCCEEEEEEeCCCCcCCCCcEeEEEEEEEECCCCCCcceEEEEEecCCceeEEEeCCCCCC
Confidence 34446675 7889999999999999999998652 345799999999987644332211 12344588999999999
Q ss_pred CeEEEEEEEEeCCCCCCCCCCCCceEeec
Q psy7040 393 NQYEFRVLAVNKGGPGEPSDPTAPHIARA 421 (716)
Q Consensus 393 ~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~ 421 (716)
+.|.|+|+|.|..|.|.+|......+...
T Consensus 89 t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 117 (122)
T 1va9_A 89 AQYGVVVQAFNRAGTGPSSSEINATTLES 117 (122)
T ss_dssp CCEEEEEEEEETTEECCCCCCEECCCCSS
T ss_pred CEEEEEEEEEcCCCCCCCccCEEEEeCCC
Confidence 99999999999999998887765554443
No 243
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.23 E-value=2e-10 Score=104.30 Aligned_cols=80 Identities=15% Similarity=0.228 Sum_probs=60.1
Q ss_pred cccccccEEEecCCeEEEEEE-EeccCC-CeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCC
Q psy7040 429 NRDQLSDIKVRAGSNFEFDIN-VIGEPI-PTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWG 506 (716)
Q Consensus 429 ~~~~~~~~~~~~g~~~~~~~~-v~~~p~-~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g 506 (716)
.......+.+..|+.+.|.|. +.+.|. +.+.|++++..+................|.|.++...|.|.|+|.+.|..+
T Consensus 11 ~~~~~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~ 90 (201)
T 3s97_C 11 PPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSI 90 (201)
T ss_dssp CSSCCCCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEEGGG
T ss_pred CcCCCceEEEECCCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEEEcCCCeEEECcCCcccCeEEEEEEEecCC
Confidence 334456788999999999999 889998 999999998776422211222223345799999999999999999998665
Q ss_pred ce
Q psy7040 507 TD 508 (716)
Q Consensus 507 ~~ 508 (716)
..
T Consensus 91 ~~ 92 (201)
T 3s97_C 91 TK 92 (201)
T ss_dssp TE
T ss_pred Cc
Confidence 43
No 244
>2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.22 E-value=7.6e-11 Score=96.87 Aligned_cols=101 Identities=22% Similarity=0.348 Sum_probs=75.6
Q ss_pred EEecCCCCCCC-CCCCcEEE-eeeCCeEEEEecCCC-CCCCccceEEEEEEeecCC---CceEEEeeecCCCCeEEecCC
Q psy7040 316 IEAKNPFNQPG-KPGTPEIK-DFDTDFVELAWTPPE-QNGGSPIVGYIIEKKEKYS---PIWEKCAQTEGDTPKGKVLDL 389 (716)
Q Consensus 316 ~~~~~~~~~p~-~p~~~~~~-~~~~~~i~l~W~~p~-~~~~~~i~~y~v~~~~~~~---~~~~~~~~~~~~~~~~~i~~l 389 (716)
+.+.+...+|. +|.++.+. ..+.+++.|+|.+|. ...++.|.+|+|+|+.... ..|.. ........+.|.+|
T Consensus 9 v~~~T~~~~P~~~P~~~~~~~~~s~~sv~l~W~pp~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~--~~~~~~~~~~l~~L 86 (124)
T 2dbj_A 9 ILASTTEGAPSVAPLNVTVFLNESSDNVDIRWMKPPTKQQDGELVGYRISHVWQSAGISKELLE--EVGQNGSRARISVQ 86 (124)
T ss_dssp CCCCCSSCCCCSCCEEEEEEECSSSSEEEEEEECCSCCSTTCCEEEEEEEEEEEETTEEEEEEE--EEESTTSCEEEECC
T ss_pred EEEEccCCCCCCCCcceEEEecCCCCEEEEEEcCCCcccCCCeEeEEEEEEEECCCCCccceEE--EeCCCcceEEecCC
Confidence 33444556666 78888888 578899999999973 2344589999999974332 22322 23457789999999
Q ss_pred CCCCeEEEEEEEEeCCCCCCCCCCCCceE
Q psy7040 390 IEGNQYEFRVLAVNKGGPGEPSDPTAPHI 418 (716)
Q Consensus 390 ~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~ 418 (716)
.+++.|.|+|+|.|..|.|++|......+
T Consensus 87 ~p~t~Y~~~V~A~n~~G~Gp~S~~~~~~T 115 (124)
T 2dbj_A 87 VHNATCTVRIAAVTRGGVGPFSDPVKIFI 115 (124)
T ss_dssp CSSSEEEECEEEEESSCBCCCCCCEEEEC
T ss_pred CCCCEEEEEEEEECCCccCCCCCCEEEEc
Confidence 99999999999999999999887655444
No 245
>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.22 E-value=1.5e-11 Score=100.94 Aligned_cols=114 Identities=18% Similarity=0.282 Sum_probs=81.8
Q ss_pred CCCCCCcccceEEecCCCCCC-CCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCC---ceEEEeeecCC
Q psy7040 305 GKSEPLTTTASIEAKNPFNQP-GKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSP---IWEKCAQTEGD 380 (716)
Q Consensus 305 g~~~~~~~~~~~~~~~~~~~p-~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~---~~~~~~~~~~~ 380 (716)
|.+.++... .+.+....| .+|.++.+...+.+++.|+|.+|... ++.|.+|.|+|+..... .|... ....
T Consensus 1 G~g~~S~~~---~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~-~g~i~~Y~v~~~~~~~~~~~~~~~~--~~~~ 74 (121)
T 2dlh_A 1 GSSGSSGPV---LTQTSEQAPSSAPRDVQARMLSSTTILVQWKEPEEP-NGQIQGYRVYYTMDPTQHVNNWMKH--NVAD 74 (121)
T ss_dssp CCCCCCSSS---CSCCCCCCCCSCCEEEEECCCSSSBCCEEEECCSCC-CSCEEEEEEECCSCTTSCTTTSCCC--CCSS
T ss_pred CCCCCCCCE---EEECCCcCCCCCCcccEEEecCCCEEEEEECCCCCC-CCcEeEEEEEEEeCCCCCccccEEE--ecCC
Confidence 344444443 223333455 48889999888999999999998654 44799999999876432 22221 2346
Q ss_pred CCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCC
Q psy7040 381 TPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKV 424 (716)
Q Consensus 381 ~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~ 424 (716)
...+.|.+|.+++.|.|+|+|.|..|.|.++....+.+....+.
T Consensus 75 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P~ 118 (121)
T 2dlh_A 75 SQITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQTGSGP 118 (121)
T ss_dssp CSEECCBSCCSSCEEEEEEEEEESSCBCCCCCCEEEECCCCCSC
T ss_pred ceEEEecCCCCCCEEEEEEEEEeCCccCCCCCCEEEECCCCCCC
Confidence 77899999999999999999999999999887655555444333
No 246
>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.22 E-value=1.1e-10 Score=96.27 Aligned_cols=90 Identities=17% Similarity=0.308 Sum_probs=74.8
Q ss_pred CCCCceEEEEeCCeEEEEecCCCCC-CCCccceEEEEEEcCCCCcEEEecccCCCeEEecCCCCCcEEEEEEEEEecCcc
Q psy7040 57 PEGPLEVSNIHKDGCTLKWNKPKDD-GGEPLEGYLVEKYDPETGVWIPVGKTREPEMDVTGLTPGHEYKFRVKALNKEGE 135 (716)
Q Consensus 57 p~~~l~~~~~~~~s~~l~W~~p~~~-~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~~~~g~ 135 (716)
||..+++...+.+++.|+|++|..+ .++++.+|+|+|+..+...|........+++.|.+|.+++.|.|+|+|.|..|.
T Consensus 31 ~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~ 110 (124)
T 2ed9_A 31 PPQNVSLEVVNSRSIKVSWLPPPSGTQNGFITGYKIRHRKTTRRGEMETLEPNNLWYLFTGLEKGSQYSFQVSAMTVNGT 110 (124)
T ss_dssp CCBSCCEEEEETTEEEEECBCCCTTTCCSCCCEEEEEEEESSSSCCEEEECSSCSEEEEECCCSSCEEEECEEEECSSCB
T ss_pred CCeeeEEEEcCCCEEEEEEECcCCcCCCcEEeEEEEEEEECCCCcceEEecCCcCEEEEcCCCCCCEEEEEEEEEcCCcc
Confidence 4556888899999999999998753 345699999999988776666554555689999999999999999999999999
Q ss_pred CCCccccceEE
Q psy7040 136 SEPLETFSSII 146 (716)
Q Consensus 136 ~~~s~~~~~~~ 146 (716)
+.+|......+
T Consensus 111 g~~S~~~~~~T 121 (124)
T 2ed9_A 111 GPPSNWYTAET 121 (124)
T ss_dssp CCCCCCEEEEC
T ss_pred CCCCCCEEEEC
Confidence 99887766554
No 247
>4doh_B Interleukin-20 receptor subunit beta; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}
Probab=99.21 E-value=7.7e-10 Score=99.46 Aligned_cols=176 Identities=20% Similarity=0.211 Sum_probs=120.7
Q ss_pred CCCCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEc-----CCCCcEEE---ecccCCCeEEecC-CCCCcEEE
Q psy7040 54 GLDPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYD-----PETGVWIP---VGKTREPEMDVTG-LTPGHEYK 124 (716)
Q Consensus 54 ~~~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~-----~~~~~~~~---~~~~~~~~~~i~~-L~~~~~y~ 124 (716)
.+++|.++++....-. ..|+|+++.. .+. -..|.|+|+. .+...|.. |.....+.+.|.+ +..+..|.
T Consensus 6 ~lp~P~nv~~~s~n~~-~iL~W~p~~~-~~~-~~~Y~V~y~~~~~~~~~~~~W~~~~~C~~i~~~~Cdlt~~~~~~~~Y~ 82 (206)
T 4doh_B 6 ILPAPQQLSVLSTNMK-HLLMWSPVIA-PGE-TVYYSVEYQGEYESLYTSHIWIPSSWCSLTEGPECDVTDDITATVPYN 82 (206)
T ss_dssp CCCCCCCCEEEEETTE-EEEECCCCCC-SSS-CCEEEEEEEEHHHHHHSTTCCEEEEEEEEESSSEEECTTTCCSSSCEE
T ss_pred cCCCCCeeEEEEeCCE-EEEEECCCCC-CCC-CEEEEEEEEEeccccCCCccceecccccCCCCCEEcCCccccCCCCEE
Confidence 3577888888887766 7999999852 223 4679999984 45677875 4445568999995 77788999
Q ss_pred EEEEEEecCccCCCccccceEEecCCCCcccccccccceecccCCCCCCceEEEEecCCccEEEEeccccCcceEEEEEE
Q psy7040 125 FRVKALNKEGESEPLETFSSIIARDPYSKYTSVSSLDSHKRSNQPCGSGMVRKVQHLDYNTKLGVRMAQRADAGFYTVTA 204 (716)
Q Consensus 125 ~~v~a~~~~g~~~~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~G~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a 204 (716)
+||+|.+..+.|.++.........
T Consensus 83 ~RVrA~~~~~~S~w~~~~~f~~~~-------------------------------------------------------- 106 (206)
T 4doh_B 83 LRVRATLGSQTSAWSILKHPFNRQ-------------------------------------------------------- 106 (206)
T ss_dssp EEEEEEETTEECCCEECSSCBCGG--------------------------------------------------------
T ss_pred EEEEEEcCCCccCccccccccchh--------------------------------------------------------
Confidence 999999988888776543221110
Q ss_pred EeCCCCceeEEEEEEecCCCCCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCCCCCeEEccccCcccceEE
Q psy7040 205 ENINGKDSVEVEVIVLDKPSPPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEATGRWTPAGETEGPVTGLE 284 (716)
Q Consensus 205 ~n~~g~~~~~~~~~v~~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~ 284 (716)
.+.+.||. +.+. ....++.|.|.+|. .+..|.|.+...+...-............+.
T Consensus 107 ---------------~t~i~PP~--v~v~-~~~~~i~V~~~~p~-----~~l~Y~v~y~~~~~~~~~~~~~~~~~~~~~~ 163 (206)
T 4doh_B 107 ---------------STILTRPG--MEIT-KDGFHLVIELEDLG-----PQFEFLVAYWRREPGAEEHVKMVRSGGIPVH 163 (206)
T ss_dssp ---------------GCBCCCCC--EEEE-EETTEEEEEECCCC-----TTCEEEEEEEESSSSCCCEEEEECCSSSEEE
T ss_pred ---------------hcccCCCe--EEEE-eCCCEEEEEecCCC-----CcEEEEEEEEEcCCCceeEEeEEccCCeEEE
Confidence 02344554 5665 57889999999752 4778999887654432211111112346899
Q ss_pred EcCCCCCCeEEEEEEEEcCC--CCCCCCc
Q psy7040 285 VEGLIPNHKYKFRVRAVNKQ--GKSEPLT 311 (716)
Q Consensus 285 i~~L~p~~~y~~~v~a~n~~--g~~~~~~ 311 (716)
|.+|.|++.|.|+|+|.... +.+..|.
T Consensus 164 i~~L~p~t~Ycv~Vra~~~~~~~~g~~S~ 192 (206)
T 4doh_B 164 LETMEPGAAYCVKAQTFVKAIGRYSAFSQ 192 (206)
T ss_dssp EEECCSSSCEEEEEEEEEGGGTEECCCCC
T ss_pred EeCCCCCCcEEEEEEEEecCCCCCCCCCC
Confidence 99999999999999998742 4444443
No 248
>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.21 E-value=9e-11 Score=93.90 Aligned_cols=90 Identities=19% Similarity=0.251 Sum_probs=70.8
Q ss_pred CCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCC---CCcEEEecccCCCeEEecCCCCCcEEEEEEEEEec
Q psy7040 56 DPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPE---TGVWIPVGKTREPEMDVTGLTPGHEYKFRVKALNK 132 (716)
Q Consensus 56 ~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~---~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~~~ 132 (716)
.++..|++..++.+++.|+|++|...+ +.|.+|+|+|+..+ ...+... ....+.+.|.+|.|++.|.|+|+|.|.
T Consensus 9 ~~p~~l~~~~~~~~sv~l~W~~p~~~~-g~i~~Y~v~~~~~~~~~~~~~~~~-~~~~~~~~i~~L~p~t~Y~~~V~A~n~ 86 (109)
T 2e7h_A 9 PAVSDIRVTRSSPSSLSLAWAVPRAPS-GAVLDYEVKYHEKGAEGPSSVRFL-KTSENRAELRGLKRGASYLVQVRARSE 86 (109)
T ss_dssp CCCCCCEEEEEETTEEEEECCCCCCSS-SCCCEEEEEEEETTCCSTTTSEEE-EESSSEEEEESCCTTSCEEEEEEEECS
T ss_pred CCCCccEEEecCCCEEEEEeCCCCCCC-CcEeEEEEEEEECCCCCCceeEEE-ccCCCEEEECCCCCCCeEEEEEEEEeC
Confidence 345668899999999999999997444 45999999998765 2223322 334579999999999999999999999
Q ss_pred CccCCCccccceEEe
Q psy7040 133 EGESEPLETFSSIIA 147 (716)
Q Consensus 133 ~g~~~~s~~~~~~~~ 147 (716)
.|.+.+|......+.
T Consensus 87 ~G~g~~S~~~~~~T~ 101 (109)
T 2e7h_A 87 AGYGPFGQEHHSQTQ 101 (109)
T ss_dssp SCBCCCCSCEECCCC
T ss_pred CccCCCCCCEEEEcC
Confidence 999998876665554
No 249
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.21 E-value=2.5e-10 Score=104.72 Aligned_cols=70 Identities=23% Similarity=0.315 Sum_probs=56.5
Q ss_pred cccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEe------------ccCCcEEEEeCCCeEEEEECCCCCCCceeEEEE
Q psy7040 433 LSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITI------------ISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLA 500 (716)
Q Consensus 433 ~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~------------~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~ 500 (716)
+..+.+.+|+.+.|.|.+.+.|.+.+.|++++..+ ....++.+.. ..|.|.++...|.|.|+|.
T Consensus 8 ~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~----~~L~i~~v~~~D~G~Y~C~ 83 (212)
T 1f97_A 8 QSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSS----SGITFSSVTRKDNGEYTCM 83 (212)
T ss_dssp CSEEEEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEET----TEEEESCCCGGGCEEEEEE
T ss_pred CCCeEEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEeec----eeEEEcccCcccCeEEEEE
Confidence 34578999999999999999999999999987552 1233343332 5899999999999999999
Q ss_pred EEcCCC
Q psy7040 501 VKNSWG 506 (716)
Q Consensus 501 a~n~~g 506 (716)
|.|..|
T Consensus 84 ~~~~~g 89 (212)
T 1f97_A 84 VSEEGG 89 (212)
T ss_dssp EEETTS
T ss_pred EEccCC
Confidence 999877
No 250
>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.21 E-value=6.5e-11 Score=94.31 Aligned_cols=90 Identities=20% Similarity=0.328 Sum_probs=72.9
Q ss_pred CCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCCcEEEecccCCCeEEecCCCCCcEEEEEEEEEecCccC
Q psy7040 57 PEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETGVWIPVGKTREPEMDVTGLTPGHEYKFRVKALNKEGES 136 (716)
Q Consensus 57 p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~~~~g~~ 136 (716)
||..+++..++.+++.|+|++|...++ .+.+|+|+|+..+...|..... ..+++.|.+|.|++.|.|+|+|.|..|.+
T Consensus 10 ~P~~l~~~~~~~~si~l~W~~p~~~~g-~i~~Y~v~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g 87 (106)
T 2ed8_A 10 PVENLQAVSTSPTSILITWEPPAYANG-PVQGYRLFCTEVSTGKEQNIEV-DGLSYKLEGLKKFTEYSLRFLAYNRYGPG 87 (106)
T ss_dssp CCEEEEEECSSTTEEEEEEECCSSCSS-CCCEEEEEEEETTTCCEEEEEE-CSSCEEEESCCTTCEEEEEEEEECSSCEE
T ss_pred CCceeEEEecCCCEEEEEECCCCCCCC-CeeEEEEEEEECCCCceEEEeC-CccEEEECCCCCCCEEEEEEEEEeCCccC
Confidence 444567777888999999999975444 6999999999887777765543 35899999999999999999999999998
Q ss_pred CCccccceEEec
Q psy7040 137 EPLETFSSIIAR 148 (716)
Q Consensus 137 ~~s~~~~~~~~~ 148 (716)
.++......+..
T Consensus 88 ~~S~~~~~~T~~ 99 (106)
T 2ed8_A 88 VSTDDITVVTLS 99 (106)
T ss_dssp EECCCEEEECCC
T ss_pred CCcCCEEEEcCC
Confidence 888776665543
No 251
>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.21 E-value=4.5e-11 Score=98.16 Aligned_cols=95 Identities=31% Similarity=0.506 Sum_probs=76.7
Q ss_pred cCCCCCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEe---CCCCCeEEcccc--CcccceEEEcCCCCCCeEE
Q psy7040 221 DKPSPPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMD---EATGRWTPAGET--EGPVTGLEVEGLIPNHKYK 295 (716)
Q Consensus 221 ~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~---~~~~~~~~~~~~--~~~~~~~~i~~L~p~~~y~ 295 (716)
++|.+|.+ +.+.....+++.|+|.++. +++.++.+|.|+++. .....|..+... ......+.+.+|.|++.|.
T Consensus 16 ~~P~~P~~-l~~~~~~~~sv~l~W~p~~-~~~~~i~~Y~v~~~~~~~~~~~~w~~~~~~~~~~~~~~~~v~~L~p~t~Y~ 93 (124)
T 1wis_A 16 ELPGPPTN-LGISNIGPRSVTLQFRPGY-DGKTSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDARSMEVPDLNPFTCYS 93 (124)
T ss_dssp CCCCCCEE-EEEESCCSSCEEEEEECCC-CCSSCCSEEEEEECBSCCSTTSCCEEEEEEESCTTCSEEEECSCCTTSEEC
T ss_pred CCCccCCC-CEEEEecCCEEEEEEECCC-CCCCcccEEEEEEEECCCCCCCCCeEeeeEccCCCceEEEeCCCCCCCEEE
Confidence 56777777 7788888999999998665 566789999999987 356778765432 3557899999999999999
Q ss_pred EEEEEEcCCCCCCCCcccceEE
Q psy7040 296 FRVRAVNKQGKSEPLTTTASIE 317 (716)
Q Consensus 296 ~~v~a~n~~g~~~~~~~~~~~~ 317 (716)
|+|+|.|..|.+.++..+..+.
T Consensus 94 frV~A~N~~G~s~~S~~~~~~~ 115 (124)
T 1wis_A 94 FRMRQVNIVGTSPPSQPSRKIQ 115 (124)
T ss_dssp CCCEEECSSCBCCCCCCCCCEE
T ss_pred EEEEEEECCccCCCcCCccceE
Confidence 9999999999998888654333
No 252
>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.21 E-value=7.3e-11 Score=95.34 Aligned_cols=96 Identities=21% Similarity=0.276 Sum_probs=75.2
Q ss_pred CCCCCCCCcEEEeeeCCeEEEEecCCC-CCCCccceEEEEEEeecCCC---ceEEEeeecCCCCeEEecCCCCCCeEEEE
Q psy7040 323 NQPGKPGTPEIKDFDTDFVELAWTPPE-QNGGSPIVGYIIEKKEKYSP---IWEKCAQTEGDTPKGKVLDLIEGNQYEFR 398 (716)
Q Consensus 323 ~~p~~p~~~~~~~~~~~~i~l~W~~p~-~~~~~~i~~y~v~~~~~~~~---~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~ 398 (716)
.+|.+|.++.+...+.++|.|+|.+|. ...++.|.+|.|+|+..+.. .|.. .........+.|.+|.|++.|.|+
T Consensus 7 ~P~~~P~~~~~~~~~~~si~l~W~~p~~~~~~g~i~gY~v~y~~~~~~~~~~~~~-~~~~~~~~~~~i~~L~p~t~Y~~~ 85 (114)
T 1x4y_A 7 GPVAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKK-DMVEGDRYWHSISHLQPETSYDIK 85 (114)
T ss_dssp SCCSCCEEEEEECSSSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCCC-EEEETTCCEEEECSCCTTCEEEEE
T ss_pred CCCCCCeEEEEEecCCCEEEEEEeCCCchhcCCccceEEEEEEECCCCCCcceee-EecCCcEeEEEcCCCCCCCEEEEE
Confidence 456788889999999999999999975 24556899999999876533 2321 223455678999999999999999
Q ss_pred EEEEeCCCCCCCCCCCCceEe
Q psy7040 399 VLAVNKGGPGEPSDPTAPHIA 419 (716)
Q Consensus 399 v~a~n~~g~~~~s~~~~~~~~ 419 (716)
|+|+|..|.|.+|......+.
T Consensus 86 V~A~n~~G~g~~S~~v~~~T~ 106 (114)
T 1x4y_A 86 MQCFNEGGESEFSNVMICETK 106 (114)
T ss_dssp EEEECTTCCCCCCCCEEEECC
T ss_pred EEEEcCCccCCCcCCEEEEeC
Confidence 999999999998876544443
No 253
>4doh_R Interleukin-20 receptor subunit alpha; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}
Probab=99.21 E-value=9.8e-10 Score=99.92 Aligned_cols=184 Identities=16% Similarity=0.116 Sum_probs=122.6
Q ss_pred CCCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCCCCCeEEcccc-CcccceEEEcCCC--CCCeEEEEEEE
Q psy7040 224 SPPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEATGRWTPAGET-EGPVTGLEVEGLI--PNHKYKFRVRA 300 (716)
Q Consensus 224 ~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~-~~~~~~~~i~~L~--p~~~y~~~v~a 300 (716)
.+|.+ +.+.... ....|+|+++...+ .....|.++++..+...|...... ......+.|.++. +...|.++|+|
T Consensus 10 p~P~n-v~~~s~n-~~~iL~W~p~~~~~-~~~~~Y~Vqy~~~~~~~W~~~~~C~~~~~~~Cdlt~~~~~~~~~Y~~RV~A 86 (221)
T 4doh_R 10 PKPAN-ITFLSIN-MKNVLQWTPPEGLQ-GVKVTYTVQYFIYGQKKWLNKSECRNINRTYCDLSAETSDYEHQYYARVRA 86 (221)
T ss_dssp -CCEE-EEEEEET-TEEEEEEECCCCSS-CCCCEEEEEEEETTSCCCEECGGGSSBSSSEEECTTTTCCSSCCEEEEEEE
T ss_pred CCCce-eEEEEEC-CcEEEEEcCCCCCC-CCCeEEEEEEEECCCCCceecccccCCCCCEEeCCCccccCCCCEEEEEEE
Confidence 34666 6776644 45569999754422 247899999998777789775432 3456788998875 56689999999
Q ss_pred EcCCCCCCCCcccceEEecCCCCCCCCCCCcEEEeeeCCeEEEEecCCCCC----CCc--------cceEEEEEEeecCC
Q psy7040 301 VNKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDFDTDFVELAWTPPEQN----GGS--------PIVGYIIEKKEKYS 368 (716)
Q Consensus 301 ~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~----~~~--------~i~~y~v~~~~~~~ 368 (716)
....+.|.++......... ....++|. +.+. ..+..|.|.|.+|... ++. ....|+|.|...++
T Consensus 87 ~~g~~~S~w~~~~~F~p~~--~t~igPP~-v~v~-~~~~~l~V~~~~P~~~~~~~~~~~~s~~~i~~~l~Y~V~y~~~~~ 162 (221)
T 4doh_R 87 IWGTKCSKWAESGRFYPFL--ETQIGPPE-VALT-TDEKSISVVLTAPEKWKRNPEDLPVSMQQIYSNLKYNVSVLNTKS 162 (221)
T ss_dssp ESSSCBCCCEECCCBCHHH--HCBCCCCE-EEEE-CCSSCEEEEEECCBCCCSSTTSCCCBHHHHSTTCEEEEEEEETTT
T ss_pred EcCCcccCCEecCceechh--hCccCCCE-EEEE-ECCCEEEEEEeCCCcccccCCCCceEHHHhcCceEEEEEEEECCC
Confidence 9977776655432222111 12345554 7777 5678999999987642 121 13589999988764
Q ss_pred CceEEEeeecCCCCeEEecCCCCCCeEEEEEEEEeC--CCCCCCCCCCCce
Q psy7040 369 PIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNK--GGPGEPSDPTAPH 417 (716)
Q Consensus 369 ~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~--~g~~~~s~~~~~~ 417 (716)
.... .. ......+.|.+|.|++.|.|+|+|... .|.|.+|....+.
T Consensus 163 ~~~~-~~--~~~~~~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~ 210 (221)
T 4doh_R 163 NRTW-SQ--CVTNHTLVLTWLEPNTLYCVHVESFVPGPPRRAQPSEKQCAR 210 (221)
T ss_dssp TEEE-EE--EECSSEEEECSCCTTCEEEEEEEEECSSSCCCCCCCEEEEEE
T ss_pred CcEE-EE--eecCcEEEEecCCCCCcEEEEEEEEEcCCCCCCCCCCCEeEe
Confidence 3221 11 124568999999999999999999965 5667666544333
No 254
>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.21 E-value=5.6e-11 Score=94.94 Aligned_cols=89 Identities=25% Similarity=0.365 Sum_probs=73.8
Q ss_pred CCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEE
Q psy7040 321 PFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVL 400 (716)
Q Consensus 321 ~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~ 400 (716)
...+|.+|. +.+...+.+++.|+|.+|.. .++.|.+|.|+|+..+...|... .......++.|.+|.+++.|.|+|+
T Consensus 4 ~~~~P~~p~-~~v~~~~~~sv~l~W~~p~~-~~g~i~~Y~v~~~~~~~~~~~~~-~~~~~~~~~~i~~L~p~t~Y~~~V~ 80 (107)
T 2dn7_A 4 GSSGPGRPT-MMISTTAMNTALLQWHPPKE-LPGELLGYRLQYCRADEARPNTI-DFGKDDQHFTVTGLHKGTTYIFRLA 80 (107)
T ss_dssp CCCCCCCCE-EEEEECSTTEEEEEEECCSS-CSSCCCEEEEEEEETTCSSCEEE-EEETTCCEEEEECCCTTCEEEEEEE
T ss_pred CCCCCCCCc-EeEEecCCCEEEEEECCCCC-CCCceeEEEEEEEECCCCCCEEE-EeCCCccEEEeCCCCCCCEEEEEEE
Confidence 346677777 77777789999999999874 44579999999998876677654 3456778999999999999999999
Q ss_pred EEeCCCCCCCCC
Q psy7040 401 AVNKGGPGEPSD 412 (716)
Q Consensus 401 a~n~~g~~~~s~ 412 (716)
|.|..|.|.++.
T Consensus 81 A~n~~G~g~~s~ 92 (107)
T 2dn7_A 81 AKNRAGLGEEFE 92 (107)
T ss_dssp EEETTEEEEEEE
T ss_pred EEcCCcccCCee
Confidence 999999988776
No 255
>1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.21 E-value=7.1e-11 Score=91.51 Aligned_cols=84 Identities=29% Similarity=0.505 Sum_probs=68.4
Q ss_pred CCCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCCcEEEe--cccCCCeEEecCCCCCcEEEEEEEEEec
Q psy7040 55 LDPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETGVWIPV--GKTREPEMDVTGLTPGHEYKFRVKALNK 132 (716)
Q Consensus 55 ~~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~--~~~~~~~~~i~~L~~~~~y~~~v~a~~~ 132 (716)
+.||.+|++..++.+++.|+|++|. .++.+|+|+|+..+.+..... .....++++|.+|.|++.|.|+|+|.|.
T Consensus 2 l~~P~~l~~~~~~~~si~lsW~~p~----~~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~~~ 77 (94)
T 1j8k_A 2 IDRPKGLAFTDVDVDSIKIAWESPQ----GQVSRYRVTYSSPEDGIHELFPAPDGEEDTAELQGLRPGSEYTVSVVALHD 77 (94)
T ss_dssp CCCCCCCEEEEEETTEEEEECCCCS----SCCSCEEEEEEETTTEEEEECCCCCSSCCEEEECSCCCCSEEEEEEEECSS
T ss_pred CCCCCccEEEeecCCEEEEEEcCCC----CCcceEEEEEEeCCCCCceEEecCCCCccEEEeCCCCCCCEEEEEEEEEcC
Confidence 5788999999999999999999885 359999999987665433222 2234589999999999999999999999
Q ss_pred CccCCCcccc
Q psy7040 133 EGESEPLETF 142 (716)
Q Consensus 133 ~g~~~~s~~~ 142 (716)
.|.+.++...
T Consensus 78 ~g~s~p~~~~ 87 (94)
T 1j8k_A 78 DMESQPLIGT 87 (94)
T ss_dssp SCCCCCEEEE
T ss_pred CCcCCCEEeE
Confidence 9988776543
No 256
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.20 E-value=2.1e-11 Score=121.25 Aligned_cols=228 Identities=18% Similarity=0.122 Sum_probs=139.2
Q ss_pred ccEEEEeccccCcceEEEEEEEeCCCCceeEEEEEEecCCCCC--CCCeEEeEEeCCeEEEEEECCCC-CCCCccceEEE
Q psy7040 184 NTKLGVRMAQRADAGFYTVTAENINGKDSVEVEVIVLDKPSPP--GGPLKVSNVHAEGVTLDWKVPDD-DGGQPIEKYVV 260 (716)
Q Consensus 184 ~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~~p--~~~~~~~~~~~~~~~l~W~~p~~-~~~~~~~~y~v 260 (716)
+..|.|.+++..|+|.|+|.|.|..|.....+.|.|..+|... ..........+..+.|.|..... ..+.+...+.+
T Consensus 80 ~~~L~i~~v~~~D~G~Y~C~~~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W 159 (339)
T 3o4o_C 80 DGALWLLPALQEDSGTYVCTTRNASYCDKMSIELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQW 159 (339)
T ss_dssp TTEEEESSBCTTCCEEEECCEEETTEEEEEEEEEEEECSCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCCBCC
T ss_pred CCeEEECCCCcccCEEEEEEEECCcceEEEEEEEEEEcCCCccccccccceEEECCCCEEEEecCCcccccCCCCceEEE
Confidence 5689999999999999999999999988888999998876542 11122344568899999994211 01222222222
Q ss_pred EEEeC---CC-CCeEEccccCcccceEEEcCCCCCCeEEEEEEEEcCCCCCCCCcccceEEecCCCCCCCCCCCcEEEee
Q psy7040 261 DKMDE---AT-GRWTPAGETEGPVTGLEVEGLIPNHKYKFRVRAVNKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDF 336 (716)
Q Consensus 261 ~~~~~---~~-~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~ 336 (716)
..... .. ...... .....+.|.++...+.+.|+|.|.|..|........
T Consensus 160 ~k~g~~~~~~~~~~~~~----~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~----------------------- 212 (339)
T 3o4o_C 160 YKDSLLLDKDNEKFLSV----RGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITR----------------------- 212 (339)
T ss_dssp EESSCBCCTTCSSEEEC----TTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEE-----------------------
T ss_pred ecCCeeCCCCCceeEEc----CCcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEE-----------------------
Confidence 21110 00 111111 123589999999999999999999966532110000
Q ss_pred eCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCc
Q psy7040 337 DTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAP 416 (716)
Q Consensus 337 ~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~ 416 (716)
.+.|.-..+...
T Consensus 213 ---~~~l~V~~~~~~----------------------------------------------------------------- 224 (339)
T 3o4o_C 213 ---SIELRIKKKKEE----------------------------------------------------------------- 224 (339)
T ss_dssp ---EEEEEEECCCCC-----------------------------------------------------------------
T ss_pred ---EEEEEEEcCCCC-----------------------------------------------------------------
Confidence 000000000000
Q ss_pred eEeecCCCCCcccccccccEEEecCCeEEEEEEE---eccC-CCeEEEEeCCeEecc---------CCcEEEEeCCC---
Q psy7040 417 HIARAKKVSPYINRDQLSDIKVRAGSNFEFDINV---IGEP-IPTKEWLCNDITIIS---------KDRFKIVNDDK--- 480 (716)
Q Consensus 417 ~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v---~~~p-~~~~~W~~~~~~~~~---------~~~~~~~~~~~--- 480 (716)
.+|.+... ...+.+..|..+.|.|.+ .+.| .+.+.|++++..+.. ..++.+...+.
T Consensus 225 -------~~P~i~~~-~~~~~v~~G~~v~L~C~~~~~~g~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 296 (339)
T 3o4o_C 225 -------TIPVIISP-LKTISASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNENYI 296 (339)
T ss_dssp -------CCCEECCC-SCCCCCCCCSCCCCCCCEEESSSCCSSCEEEEESSSSCSSSSSCSSSCEECCCEECCCSSSCEE
T ss_pred -------CCCEEecC-CceeEeccCCCEEEEEEEECCCCCCCCceEEEEECCeecccccccccceecceEEecccCceEE
Confidence 01111100 112345667778889999 8888 889999998876432 22232222222
Q ss_pred eEEEEECCCCCCCc-eeEEEEEEcCCCceeeEEEE
Q psy7040 481 STKLKVFDSKRGDS-GIYTLAVKNSWGTDKGTAKV 514 (716)
Q Consensus 481 ~~~l~i~~l~~~~~-~~y~~~a~n~~g~~~~s~~~ 514 (716)
...|.|.++...|. |.|+|.|.|..|..+..+.+
T Consensus 297 ~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~~ 331 (339)
T 3o4o_C 297 EVPLIFDPVTREDLHMDFKCVVHNTLSFQTLRTTV 331 (339)
T ss_dssp EECCEECSSCCCSCCCCCEEEEEETTEEECCBCCC
T ss_pred EEEEEEEEechhhcCccEEEEEEeccCceEEEEEh
Confidence 12799999999997 99999999999987765443
No 257
>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.20 E-value=1.2e-10 Score=92.99 Aligned_cols=90 Identities=27% Similarity=0.405 Sum_probs=72.5
Q ss_pred CCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCC-cEEEecccCCCeEEecCCCCCcEEEEEEEEEecCc
Q psy7040 56 DPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETG-VWIPVGKTREPEMDVTGLTPGHEYKFRVKALNKEG 134 (716)
Q Consensus 56 ~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~-~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~~~~g 134 (716)
.||..+.+..++.+++.|+|+++ ++.++.+|+|+|+..... .|..+.....+.+.|.+|.+++.|.|+|+|.|..|
T Consensus 9 ~~P~~~~~~~~~~~sv~l~W~~~---~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G 85 (106)
T 2dju_A 9 KPPIDLVVTETTATSVTLTWDSG---NSEPVTYYGIQYRAAGTEGPFQEVDGVATTRYSIGGLSPFSEYAFRVLAVNSIG 85 (106)
T ss_dssp CCCEEEEEEEEETTEEEEEEECC---CSSCCSEEEEEEEETTCCSCCCCBCCCCSSEEEEESCCTTCEEEEEEEEECSSC
T ss_pred cCCCCcEEEeccCCEEEEEEcCC---CCCCceEEEEEEEECCCCCCeEEccCCCccEEEEeCCCCCcEEEEEEEEEeCCc
Confidence 34555778888999999999987 345699999999876643 56655544568999999999999999999999999
Q ss_pred cCCCccccceEEec
Q psy7040 135 ESEPLETFSSIIAR 148 (716)
Q Consensus 135 ~~~~s~~~~~~~~~ 148 (716)
.+.++......+..
T Consensus 86 ~~~~S~~~~~~T~~ 99 (106)
T 2dju_A 86 RGPPSEAVRARTGE 99 (106)
T ss_dssp BCCCCCCEEEECCC
T ss_pred cCCCcccEEeEcCC
Confidence 99988776655543
No 258
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.20 E-value=8e-10 Score=99.41 Aligned_cols=164 Identities=20% Similarity=0.253 Sum_probs=114.2
Q ss_pred cccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEE
Q psy7040 433 LSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTA 512 (716)
Q Consensus 433 ~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~ 512 (716)
+..+.+..|+.+.|.|.+.+.|.+.+.|++++..+....++.+.. ....|.|.++...|.|.|+|.+.|..|......
T Consensus 11 ~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~--~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~ 88 (192)
T 2va4_A 11 SFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKG--SNTELTVRNIINSDGGPYVCRATNKAGEDEKQA 88 (192)
T ss_dssp EEEEETTSCCCEEEECEEECSSCCEEEEEETTEECCCSSSEEEET--TTTEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred CcEEEEecCCCEEEEEeeccCCCCeEEEEECCeEcCCCccEEEeC--CeeEEEEecCChhcCcEEEEEEEccccccceEE
Confidence 346778899999999999999999999999999988777776543 345899999999999999999999998877777
Q ss_pred EEEEE-EEEEEEeCC--CCCCCCceeeEEEEEEecCCCceeeeEEEccceeeeec------------cccceeEEEEcCC
Q psy7040 513 KVTVL-GCSLKWNPP--EDDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTID------------NVDYFTKITIRPL 577 (716)
Q Consensus 513 ~~~v~-~v~l~W~~p--~~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~------------~~~~~~~~~i~~L 577 (716)
.+.+. ...+.-.+. ...+......|.+... +.+.+.|++.+....... .......+.|.++
T Consensus 89 ~l~V~~~p~~~~~~~~~~~~g~~v~l~C~~~~~----p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~ 164 (192)
T 2va4_A 89 FLQVFVQPHIIQLKNETTYENGQVTLVCDAEGE----PIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDV 164 (192)
T ss_dssp EEEEEEEEEEEEECCEEECTTSEEEEEEEEEEE----SCCEEEEEETTTTEEECTTCBCTTSCEEEEEETTEEEEEEESC
T ss_pred EEEEEccCcccccCcceEEeCCeEEEEEEecCC----CCCcEEEEeCCCCceeeccccccCCcEEEeeccCceEEEEecC
Confidence 66665 111111111 0112222334444333 334499998732221100 0112367999999
Q ss_pred CCCCeEEEEEEEEcCCCCCccceee
Q psy7040 578 QRSDTAQYTVTATNSQGKDQVFIEV 602 (716)
Q Consensus 578 ~~~~~y~~~v~a~n~~G~~~~s~~~ 602 (716)
...+.+.|+|.|.|..|....+..+
T Consensus 165 ~~~d~G~Y~C~a~n~~g~~~~~~~l 189 (192)
T 2va4_A 165 KLSDSGRYDCEAASRIGGHQKSMYL 189 (192)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEE
T ss_pred CcccCEEEEEEEEecCCceEEEEEE
Confidence 9999999999999999875544433
No 259
>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.20 E-value=3.7e-11 Score=96.79 Aligned_cols=98 Identities=23% Similarity=0.269 Sum_probs=77.3
Q ss_pred cCCCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEE
Q psy7040 319 KNPFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFR 398 (716)
Q Consensus 319 ~~~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~ 398 (716)
.+...+|.+|.++.+.....+++.|+|.+|...+ +.|.+|.|+|+..+...+. ..........+.|.+|.+++.|.|+
T Consensus 5 ~T~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~-g~i~~Y~v~~~~~~~~~~~-~~~~~~~~~~~~i~~L~p~t~Y~~~ 82 (111)
T 1x5l_A 5 SSGQAAPSQVVVIRQERAGQTSVSLLWQEPEQPN-GIILEYEIKYYEKDKEMQS-YSTLKAVTTRATVSGLKPGTRYVFQ 82 (111)
T ss_dssp CCSCCCCCCCCCEECSCBCSSCEEEEECCCSCCC-SCCCEEEEEEEESSSCCSS-CEEEEESSSEEEECSCCTTCEEEEC
T ss_pred EcCCCCCCCCceEEEEEcCCCEEEEEECCCCCCC-CEEEEEEEEEEECCCCcee-EEEecCCCCEEEEcCCCCCCEEEEE
Confidence 3455778899999998889999999999986554 4799999999876532221 1223456789999999999999999
Q ss_pred EEEEeCCCCCCCCCCCCceE
Q psy7040 399 VLAVNKGGPGEPSDPTAPHI 418 (716)
Q Consensus 399 v~a~n~~g~~~~s~~~~~~~ 418 (716)
|+|.|..|.|.+|......+
T Consensus 83 V~A~n~~G~g~~S~~~~~~T 102 (111)
T 1x5l_A 83 VRARTSAGCGRFSQAMEVET 102 (111)
T ss_dssp EEEEETTEECCCCCCEEEEC
T ss_pred EEEEeCCcCCCCcccEEEEc
Confidence 99999999998887655443
No 260
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.19 E-value=1.7e-10 Score=114.23 Aligned_cols=123 Identities=12% Similarity=0.104 Sum_probs=89.0
Q ss_pred eEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccCCCe-EEEE
Q psy7040 383 KGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPT-KEWL 461 (716)
Q Consensus 383 ~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~-~~W~ 461 (716)
.+.|..+...+...|+|.|.|..|....+.... ...+|.+.........+..|..+.|.|.+.+.|.+. +.|+
T Consensus 195 ~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~------V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~i~W~ 268 (331)
T 3u83_A 195 RYRLVPSREAHQQSLACIVNYHMDRFKESLTLN------VQYEPEVTIEGFDGNWYLQRMDVKLTCKADANPPATEYHWT 268 (331)
T ss_dssp EEEECCCGGGTTCEEEEEEEETTEEEEEEEECC------EEEEEEEEEECCCSCCBTTCCCEEEEEEEEEESCCCEEEEE
T ss_pred EEEEEeccccCCCEEEEEEecCCCcceeeEEEE------EecCCeEEEecCCCceEeCCCeEEEEEeCcCCCCCCEEEEE
Confidence 356666777888999999999876532211111 112344433333444577899999999999999998 9999
Q ss_pred eCCeEeccCCcEEEEeCCCeEEEEEC-CCCCCCceeEEEEEEcCCCceeeEEEEEEE
Q psy7040 462 CNDITIISKDRFKIVNDDKSTKLKVF-DSKRGDSGIYTLAVKNSWGTDKGTAKVTVL 517 (716)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~~l~i~-~l~~~~~~~y~~~a~n~~g~~~~s~~~~v~ 517 (716)
+++..+... ..+. ...|.|. ++...|.|.|+|.|.|..|....++.+.|.
T Consensus 269 ~~~~~~~~~--~~~~----~~~L~i~~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 319 (331)
T 3u83_A 269 TLNGSLPKG--VEAQ----NRTLFFKGPINYSLAGTYICEATNPIGTRSGQVEVNIT 319 (331)
T ss_dssp ETTBSCCTT--EEEE----TTEEEECSCCCGGGCEEEEEEEEETTEEEEEEEEECCB
T ss_pred ECCCccccc--ceec----CcEEEEeCCCccccCeEEEEEEEeccccceEEEEEEEe
Confidence 999877543 2221 2379999 899999999999999999988777766655
No 261
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.19 E-value=2.1e-10 Score=105.64 Aligned_cols=82 Identities=24% Similarity=0.372 Sum_probs=60.4
Q ss_pred CCcccccccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCC--cEEEEeCCCeEE--EEECCCCCCCceeEEEE
Q psy7040 425 SPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKD--RFKIVNDDKSTK--LKVFDSKRGDSGIYTLA 500 (716)
Q Consensus 425 ~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~--~~~~~~~~~~~~--l~i~~l~~~~~~~y~~~ 500 (716)
+|.+.. .+..+.+.+|+.+.|.|.+.+.|.+.+.|++++..+.... ...+...+.... +.|.++...|.|.|+|.
T Consensus 9 ~P~i~~-~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~ 87 (217)
T 2vr9_A 9 SPRIIE-HPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYWCV 87 (217)
T ss_dssp CCEEEE-CCCCEEECTTSCEEECCEEECSSCCEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEEEEE
T ss_pred CCEEec-CCCceEEeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceEEEE
Confidence 455443 2456889999999999999999999999999998876532 222333222222 26788999999999999
Q ss_pred EEcCCCc
Q psy7040 501 VKNSWGT 507 (716)
Q Consensus 501 a~n~~g~ 507 (716)
|.|..|.
T Consensus 88 ~~n~~g~ 94 (217)
T 2vr9_A 88 AKNRVGQ 94 (217)
T ss_dssp EEETTEE
T ss_pred EecCCCc
Confidence 9987764
No 262
>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.19 E-value=1.8e-10 Score=94.16 Aligned_cols=92 Identities=16% Similarity=0.194 Sum_probs=75.1
Q ss_pred CCCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCCcEEEecc--cCCCeEEecCCCCCcEEEEEEEEEec
Q psy7040 55 LDPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETGVWIPVGK--TREPEMDVTGLTPGHEYKFRVKALNK 132 (716)
Q Consensus 55 ~~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~--~~~~~~~i~~L~~~~~y~~~v~a~~~ 132 (716)
+.||..+.+..++.+++.|+|++|.. .+.++.+|.|+|+..+...|..... ...+.+.|.+|.+++.|.|+|+|.|.
T Consensus 18 P~~P~~l~~~~~~~~sv~l~W~~p~~-~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~ 96 (119)
T 2ed7_A 18 PSAPRDVVPVLVSSRFVRLSWRPPAE-AKGNIQTFTVFFSREGDNRERALNTTQPGSLQLTVGNLKPEAMYTFRVVAYNE 96 (119)
T ss_dssp CCCCSCCEEEEECSSCEEEECCCCSC-CSSCEEEEEEEEEESSCCCCEEEECCCTTCCEEEECSCCSSSEEEECCEEEES
T ss_pred CcCCcceEEEecCCCEEEEEEeCCCC-CCCcEEEEEEEEEeCCCCcceeeEeecCCceEEEeCCCCCCCEEEEEEEEEcC
Confidence 34566788889999999999999875 3456999999998877666654433 33589999999999999999999999
Q ss_pred CccCCCccccceEEe
Q psy7040 133 EGESEPLETFSSIIA 147 (716)
Q Consensus 133 ~g~~~~s~~~~~~~~ 147 (716)
.|.+.++......+.
T Consensus 97 ~G~g~~S~~~~~~T~ 111 (119)
T 2ed7_A 97 WGPGESSQPIKVATQ 111 (119)
T ss_dssp SCBCSCCCCEEEECC
T ss_pred CccCCCcCCEEEEeC
Confidence 999998877766554
No 263
>3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens}
Probab=99.19 E-value=3.1e-10 Score=89.18 Aligned_cols=83 Identities=16% Similarity=0.187 Sum_probs=66.9
Q ss_pred CCCCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCC-cEEEe-cccCCCeEEecCCCCCcEEEEEEEEEe
Q psy7040 54 GLDPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETG-VWIPV-GKTREPEMDVTGLTPGHEYKFRVKALN 131 (716)
Q Consensus 54 ~~~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~-~~~~~-~~~~~~~~~i~~L~~~~~y~~~v~a~~ 131 (716)
.+.||..|++.+++.+++.|+|++|... +..+.+|+|+|+..+.. .+... .....++++|.+|.|++.|.|+|+|.|
T Consensus 7 ~~~~P~~l~v~~~t~~Sv~lsW~~p~~~-~g~i~~Y~v~y~~~~~~~~~~~~~v~~~~ts~~l~~L~p~t~Y~~~V~A~~ 85 (103)
T 3t04_D 7 VSSVPTKLEVVDATPTSLKISWDAYYSS-WQNVKYYRITYGETGGDSPVQEFTVPGYYSTATISGLKPGVDYTITVYAYD 85 (103)
T ss_dssp CCCCCCSCEEEEEETTEEEEECTTTTTT-SCCCCEEEEEEEETTCSSCCEEEEEETTCCEEEECSCCTTCCEEEEEEEES
T ss_pred cCCCCceeEEEecCCCEEEEEccCCCCC-CCccceEEEEEEECCCCCccEEEEcCCCcCEEEeCCCCCCCEEEEEEEEEe
Confidence 4678889999999999999999998754 34599999999876532 22222 223458999999999999999999999
Q ss_pred c--CccCC
Q psy7040 132 K--EGESE 137 (716)
Q Consensus 132 ~--~g~~~ 137 (716)
. .|.+.
T Consensus 86 ~~~~G~~~ 93 (103)
T 3t04_D 86 TFFPGYEP 93 (103)
T ss_dssp CCCTTCCC
T ss_pred CCCCCCCC
Confidence 9 88776
No 264
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.19 E-value=1.9e-10 Score=112.87 Aligned_cols=230 Identities=16% Similarity=0.055 Sum_probs=141.7
Q ss_pred cceEEEcCCCCCCeEEEEEEEEcCCCCCCCCcccceEEecCCCCCCCCCCCc-EEEeeeCCeEEEEecCC-----CCCCC
Q psy7040 280 VTGLEVEGLIPNHKYKFRVRAVNKQGKSEPLTTTASIEAKNPFNQPGKPGTP-EIKDFDTDFVELAWTPP-----EQNGG 353 (716)
Q Consensus 280 ~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~-~~~~~~~~~i~l~W~~p-----~~~~~ 353 (716)
...+.|.++...+.+.|+|.|.|..|........ .....+......+... ......+..+.|.|... .....
T Consensus 61 ~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~v--~v~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~ 138 (315)
T 1itb_B 61 KEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISA--KFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNEL 138 (315)
T ss_dssp SSBEECTTCCGGGCSCCEECCCSSSCCCCEECCC--EEECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCC
T ss_pred CCeEEECCCChhhCEEEEEEEeCCceEEEEEEEE--EEeCCCCCcccccccccceEEecCCCeEEEEecccccccCCCCC
Confidence 3589999999999999999999887643322111 1111111111111111 12333467789999751 11111
Q ss_pred ccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEE-eCCCCCCCCCCCC-c-eEeecCCCCCcccc
Q psy7040 354 SPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAV-NKGGPGEPSDPTA-P-HIARAKKVSPYINR 430 (716)
Q Consensus 354 ~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~-n~~g~~~~s~~~~-~-~~~~~~~~~P~~~~ 430 (716)
..+..| ..+..-.............+.|.++...+.+.|+|.|. |..|......... . +.......+|.+..
T Consensus 139 ~~i~W~-----k~~~~l~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~~~~P~~~~ 213 (315)
T 1itb_B 139 PKLQWY-----KDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVS 213 (315)
T ss_dssp CCCEEE-----ETTEECCCCSSSEEEETTEEEESSCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCCCCCCCEECS
T ss_pred CEEEEE-----ECCEECCCccceEeecCceEEEEeceehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCCCCCCCEEec
Confidence 123332 22100000000011234579999999999999999999 7777542111111 1 11112245676654
Q ss_pred cccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEE----EEeCC--------CeEEEEECCCCCCC-ceeE
Q psy7040 431 DQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFK----IVNDD--------KSTKLKVFDSKRGD-SGIY 497 (716)
Q Consensus 431 ~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~----~~~~~--------~~~~l~i~~l~~~~-~~~y 497 (716)
.....+.+..|..+.|.|.+.+.|.+.+.|++++..+....... ..... ....|.|.++...| .|.|
T Consensus 214 ~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y 293 (315)
T 1itb_B 214 PANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPF 293 (315)
T ss_dssp CCSEEEECCSSSCEEEEEEEEECTTSEEEEEETTEECCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGGTSCE
T ss_pred CCCCcEEEeCCCcEEEEEEEecCCCCeeEEEECCEECCcccccccccceeeeccCCCceeEEEEEEEEeecCHHHcCCce
Confidence 43344678999999999999999999999999999887654211 11111 23489999999999 9999
Q ss_pred EEEEEcCCCceeeEEEEEE
Q psy7040 498 TLAVKNSWGTDKGTAKVTV 516 (716)
Q Consensus 498 ~~~a~n~~g~~~~s~~~~v 516 (716)
+|.|.|..|....++.+.+
T Consensus 294 ~C~a~N~~G~~~~~~~l~v 312 (315)
T 1itb_B 294 TCFAKNTHGIDAAYIQLIY 312 (315)
T ss_dssp EEEEECTTCCEEEEEEEEC
T ss_pred EEEEecCCCceeEEEEEEe
Confidence 9999999999988877664
No 265
>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.19 E-value=1.6e-10 Score=92.15 Aligned_cols=94 Identities=23% Similarity=0.344 Sum_probs=75.5
Q ss_pred CCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCC-ceEEEeeecCCCCeEEecCCCCCCeEEEEEEE
Q psy7040 323 NQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSP-IWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLA 401 (716)
Q Consensus 323 ~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~-~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a 401 (716)
..|.+|.++.+.....+++.|+|.++ .++.+.+|.|+++..... .|.... ......+.|.+|.+++.|.|+|+|
T Consensus 6 ~~P~~P~~~~~~~~~~~sv~l~W~~~---~~~~i~~Y~v~~~~~~~~~~~~~~~--~~~~~~~~i~~L~p~t~Y~~~V~A 80 (106)
T 2dju_A 6 SGPKPPIDLVVTETTATSVTLTWDSG---NSEPVTYYGIQYRAAGTEGPFQEVD--GVATTRYSIGGLSPFSEYAFRVLA 80 (106)
T ss_dssp CSCCCCEEEEEEEEETTEEEEEEECC---CSSCCSEEEEEEEETTCCSCCCCBC--CCCSSEEEEESCCTTCEEEEEEEE
T ss_pred cCCcCCCCcEEEeccCCEEEEEEcCC---CCCCceEEEEEEEECCCCCCeEEcc--CCCccEEEEeCCCCCcEEEEEEEE
Confidence 56889999999999999999999986 245799999999876643 454332 346778999999999999999999
Q ss_pred EeCCCCCCCCCCCCceEeec
Q psy7040 402 VNKGGPGEPSDPTAPHIARA 421 (716)
Q Consensus 402 ~n~~g~~~~s~~~~~~~~~~ 421 (716)
.|..|.+.++......+...
T Consensus 81 ~n~~G~~~~S~~~~~~T~~~ 100 (106)
T 2dju_A 81 VNSIGRGPPSEAVRARTGEQ 100 (106)
T ss_dssp ECSSCBCCCCCCEEEECCCS
T ss_pred EeCCccCCCcccEEeEcCCC
Confidence 99999999887655444433
No 266
>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.19 E-value=9.4e-11 Score=96.81 Aligned_cols=102 Identities=21% Similarity=0.273 Sum_probs=77.9
Q ss_pred ecCCCCCC-CCCCCcEEEeeeCCeEEEEecCCCC-CCCccceEEEEEEeecCCCce-------EEEeeecCCCCeEEecC
Q psy7040 318 AKNPFNQP-GKPGTPEIKDFDTDFVELAWTPPEQ-NGGSPIVGYIIEKKEKYSPIW-------EKCAQTEGDTPKGKVLD 388 (716)
Q Consensus 318 ~~~~~~~p-~~p~~~~~~~~~~~~i~l~W~~p~~-~~~~~i~~y~v~~~~~~~~~~-------~~~~~~~~~~~~~~i~~ 388 (716)
+.+....| .+|.++.+...+.+++.|+|.+|.. ..++.|.+|+|+|+..+...+ ...........++.|.+
T Consensus 7 ~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~gY~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 86 (125)
T 1uen_A 7 GHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPG 86 (125)
T ss_dssp CCSCCCCCCCCCSSCEEEEEETTEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCCCEEEEEEESSCSEEEEES
T ss_pred EECCCCCCCCCCceeEEEecCCcEEEEEEcCCCchhcCceEeEEEEEEEECCCCcccccccccceEEEecCCccEEEeCC
Confidence 34445566 6889999999999999999999742 234479999999987664332 12233456788999999
Q ss_pred CCCCCeEEEEEEEEeCCCCCCCCCCCCceEe
Q psy7040 389 LIEGNQYEFRVLAVNKGGPGEPSDPTAPHIA 419 (716)
Q Consensus 389 l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~ 419 (716)
|.+++.|.|+|+|+|..|.|.+|......+.
T Consensus 87 L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~ 117 (125)
T 1uen_A 87 LEPFSHYTLNVRVVNGKGEGPASPDRVFNTP 117 (125)
T ss_dssp CCSSCEEEEEEEEEESSCEEEECCCEEEECC
T ss_pred CCCCCEEEEEEEEecCCCCCCCCCCEEEECC
Confidence 9999999999999999999888765544443
No 267
>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens}
Probab=99.19 E-value=6e-11 Score=92.89 Aligned_cols=86 Identities=26% Similarity=0.335 Sum_probs=67.6
Q ss_pred CCCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCC-CcEE-EecccCCCeEEecCCCCCcEEEEEEEEEec
Q psy7040 55 LDPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPET-GVWI-PVGKTREPEMDVTGLTPGHEYKFRVKALNK 132 (716)
Q Consensus 55 ~~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~-~~~~-~~~~~~~~~~~i~~L~~~~~y~~~v~a~~~ 132 (716)
+.||..|++..++.+++.|+|++|.. ++.+|.|+|+..+. +.+. .......++++|.+|.|++.|.|+|+|.|.
T Consensus 2 p~~P~~l~~~~~~~~sv~lsW~pP~~----~i~~Y~v~y~~~~~~~~~~~~~~~~~~t~~~i~~L~p~t~Y~~~V~A~n~ 77 (100)
T 3b83_A 2 LQPPFNIKVTNITLTTAVVTWQPPIL----PIEGILVTFGRKNDPSDETTVDLTSSITSLTLTNLEPNTTYEIRIVARNG 77 (100)
T ss_dssp CCCCEEEEEESCCSSCEEEEEECCSS----CCSEEEEEEEESSCTTTCEEEEECTTEEEEEECSCCTTCEEEEEEEEEET
T ss_pred CccCCccEEEEecCCEEEEEEcCCcc----cCCEEEEEEEECCCCCCceEEEECCcceEEEECCCCCCCEEEEEEEEEeC
Confidence 45667788888899999999999852 59999999986552 2232 223344589999999999999999999999
Q ss_pred CccCCCccccce
Q psy7040 133 EGESEPLETFSS 144 (716)
Q Consensus 133 ~g~~~~s~~~~~ 144 (716)
.|.|.++.....
T Consensus 78 ~g~s~p~~~~~~ 89 (100)
T 3b83_A 78 QQYSPPVSTTFT 89 (100)
T ss_dssp TEECCCEEEEEE
T ss_pred CCCCCCEEEEEE
Confidence 999987765543
No 268
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.19 E-value=1.2e-09 Score=99.91 Aligned_cols=171 Identities=19% Similarity=0.230 Sum_probs=117.7
Q ss_pred CCcccccccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeC-CCeEEEEECCC-CCCCceeEEEEEE
Q psy7040 425 SPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVND-DKSTKLKVFDS-KRGDSGIYTLAVK 502 (716)
Q Consensus 425 ~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~-~~~~~l~i~~l-~~~~~~~y~~~a~ 502 (716)
+|.+.. .+.++.+.+|+.+.|.|.+.+.|.+.+.|++++..+........... +....|.|.++ ...|.|.|+|.|.
T Consensus 6 ~P~~~~-~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~ 84 (212)
T 2yd6_A 6 PPRFTR-TPVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVAS 84 (212)
T ss_dssp EEEEEE-CCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEEEE
T ss_pred CCeEEe-CcceeEEecCCeEEEEEEEeeCCCCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEEEEE
Confidence 444442 34567899999999999999999999999999998876554444333 35678999999 4999999999999
Q ss_pred cCCCceeeEEEEEEEE--------EEEEEeCCC---CCCCCceeeEEEEEEecCCCceeeeEEEccceeeeec-------
Q psy7040 503 NSWGTDKGTAKVTVLG--------CSLKWNPPE---DDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTID------- 564 (716)
Q Consensus 503 n~~g~~~~s~~~~v~~--------v~l~W~~p~---~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~------- 564 (716)
|..|....+..+.+.. ..+.-.+.. ..+......|.+ .+.+.+.+.|++.+.......
T Consensus 85 n~~g~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~----~g~p~p~v~W~~~g~~l~~~~~~~~~~~ 160 (212)
T 2yd6_A 85 NNVGEISVSTRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAA----SGNPDPEITWFKDFLPVDTSNNNGRIKQ 160 (212)
T ss_dssp ETTEEEEEEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEE----ECSSCCEEEEEETTEEC------CCEEE
T ss_pred cCCCcEEEEEEEEEeccCccCCCcceeecCCcceeEecCCCEEEEEEe----cCCCCCeEEEEECCccccCcCCCceEEE
Confidence 9999877777777651 122211110 112222333433 333455699999876543221
Q ss_pred -cccceeEEEEcCCCCCCeEEEEEEEEcCCCCCccce
Q psy7040 565 -NVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFI 600 (716)
Q Consensus 565 -~~~~~~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~ 600 (716)
.......+.|.++...+.+.|+|.|.|..|....+.
T Consensus 161 ~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~~ 197 (212)
T 2yd6_A 161 LRSESIGALQIEQSEESDQGKYECVATNSAGTRYSAP 197 (212)
T ss_dssp EEETTEEEEEECSCCGGGCEEEEEEEEETTEEEECCC
T ss_pred EecCCeEEEEEcCCCcccCEEEEEEEECCCCcccccc
Confidence 011247899999999999999999999999654443
No 269
>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.19 E-value=2.4e-10 Score=92.86 Aligned_cols=91 Identities=21% Similarity=0.291 Sum_probs=73.8
Q ss_pred CCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCCcEEEecccCCCeEEecCCCCCcEEEEEEEEEecCcc
Q psy7040 56 DPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETGVWIPVGKTREPEMDVTGLTPGHEYKFRVKALNKEGE 135 (716)
Q Consensus 56 ~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~~~~g~ 135 (716)
.+|..+.+..++.+++.|+|++|...+ ..+.+|+|+|+..+...|..+ ....+++.|.+|.+++.|.|+|+|.|..|.
T Consensus 19 ~~P~~l~~~~~~~~si~l~W~~p~~~~-~~i~~Y~v~~~~~~~~~~~~~-~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~ 96 (116)
T 1x5g_A 19 GPAPNLRAYAASPTSITVTWETPVSGN-GEIQNYKLYYMEKGTDKEQDV-DVSSHSYTINGLKKYTEYSFRVVAYNKHGP 96 (116)
T ss_dssp CCCSSCEEEEEETTEEEEECCCCSCCS-SCCSEEEEEEEETTCCCCCCE-EECSSEEEECSCCTTCEEEEEEEEECSSCC
T ss_pred cCCCccEEEecCCCEEEEEEeCCCCCC-CcccEEEEEEEECCCCccEEE-ecCCceEEEcCCCCCCEEEEEEEEEcCCCc
Confidence 456668888999999999999987544 459999999998776655322 233589999999999999999999999999
Q ss_pred CCCccccceEEec
Q psy7040 136 SEPLETFSSIIAR 148 (716)
Q Consensus 136 ~~~s~~~~~~~~~ 148 (716)
+.++......+..
T Consensus 97 g~~S~~~~~~T~~ 109 (116)
T 1x5g_A 97 GVSTPDVAVRTLS 109 (116)
T ss_dssp CCBCCCCCEECCC
T ss_pred CCCCCCEEEECCC
Confidence 9888777666654
No 270
>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.19 E-value=9.9e-11 Score=94.54 Aligned_cols=93 Identities=14% Similarity=0.213 Sum_probs=70.9
Q ss_pred CCCCceEEEEeCCeEEEEecCCCC-CCCCccceEEEEEEcCCCC---cEE-EecccCCCeEEecCCCCCcEEEEEEEEEe
Q psy7040 57 PEGPLEVSNIHKDGCTLKWNKPKD-DGGEPLEGYLVEKYDPETG---VWI-PVGKTREPEMDVTGLTPGHEYKFRVKALN 131 (716)
Q Consensus 57 p~~~l~~~~~~~~s~~l~W~~p~~-~~~~~i~~y~v~~~~~~~~---~~~-~~~~~~~~~~~i~~L~~~~~y~~~v~a~~ 131 (716)
||..+.+..++.++|.|+|++|.. ..+..|.+|+|+|+..+.. .|. .......++++|.+|+|++.|.|+|+|.|
T Consensus 11 ~P~~~~~~~~~~~si~l~W~~p~~~~~~g~i~gY~v~y~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n 90 (114)
T 1x4y_A 11 GPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVEGDRYWHSISHLQPETSYDIKMQCFN 90 (114)
T ss_dssp CCEEEEEECSSSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCCCEEEETTCCEEEECSCCTTCEEEEEEEEEC
T ss_pred CCeEEEEEecCCCEEEEEEeCCCchhcCCccceEEEEEEECCCCCCcceeeEecCCcEeEEEcCCCCCCCEEEEEEEEEc
Confidence 444466778889999999999863 3445699999999866543 332 12223347899999999999999999999
Q ss_pred cCccCCCccccceEEecC
Q psy7040 132 KEGESEPLETFSSIIARD 149 (716)
Q Consensus 132 ~~g~~~~s~~~~~~~~~~ 149 (716)
..|.+.++......+...
T Consensus 91 ~~G~g~~S~~v~~~T~~~ 108 (114)
T 1x4y_A 91 EGGESEFSNVMICETKAR 108 (114)
T ss_dssp TTCCCCCCCCEEEECCCC
T ss_pred CCccCCCcCCEEEEeCCC
Confidence 999999988776666543
No 271
>2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.19 E-value=5.6e-11 Score=93.65 Aligned_cols=84 Identities=23% Similarity=0.300 Sum_probs=68.8
Q ss_pred CCCCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCCcEEEec-ccCCCeEEecCCCCCcEEEEEEEEEec
Q psy7040 54 GLDPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETGVWIPVG-KTREPEMDVTGLTPGHEYKFRVKALNK 132 (716)
Q Consensus 54 ~~~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~-~~~~~~~~i~~L~~~~~y~~~v~a~~~ 132 (716)
++.||.+|.+.+++.+++.|+|++|. ..|.+|+|.|+..++..+..+. ....+++.|.+|.|++.|.|+|.|.|.
T Consensus 7 p~~pP~~l~~~~vt~tsi~vsW~pp~----~~i~~Y~I~y~~~~~~~~~~~~v~~~~t~~~l~~L~p~T~Y~v~V~A~~~ 82 (108)
T 2ee3_A 7 GLAPPRHLGFSDVSHDAARVFWEGAP----RPVRLVRVTYVSSEGGHSGQTEAPGNATSAMLGPLSSSTTYTVRVTCLYP 82 (108)
T ss_dssp CCCCSSCEEEESCCSSCEEEEESCCS----SCCSEEEEEEEETTTCCBCCEEEETTCCEEEECSCCSSCEEEEEEEEECT
T ss_pred CCCCCceEEEEEccCCeEEEEeeCCC----CCccEEEEEEEeCCCCceeEEEcCCCcCEEEcCCCCCCCEEEEEEEEEeC
Confidence 56788999999999999999999874 3599999999876544332222 234589999999999999999999999
Q ss_pred CccCCCccc
Q psy7040 133 EGESEPLET 141 (716)
Q Consensus 133 ~g~~~~s~~ 141 (716)
.|.+.++..
T Consensus 83 ~g~s~p~~~ 91 (108)
T 2ee3_A 83 GGGSSTLTG 91 (108)
T ss_dssp TSCEEEEEE
T ss_pred CCcCCCccC
Confidence 999888765
No 272
>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C
Probab=99.18 E-value=1.5e-10 Score=90.84 Aligned_cols=91 Identities=14% Similarity=0.233 Sum_probs=68.9
Q ss_pred CCCCCCceEEEEeCCeEEEEecCCCC-CCCCccceEEEEEEcCCCC---cEEEec-ccCCCeEEecCCCCCcEEEEEEEE
Q psy7040 55 LDPEGPLEVSNIHKDGCTLKWNKPKD-DGGEPLEGYLVEKYDPETG---VWIPVG-KTREPEMDVTGLTPGHEYKFRVKA 129 (716)
Q Consensus 55 ~~p~~~l~~~~~~~~s~~l~W~~p~~-~~~~~i~~y~v~~~~~~~~---~~~~~~-~~~~~~~~i~~L~~~~~y~~~v~a 129 (716)
..+|..+.+...+.++|.|+|++|.. ..++.|.+|+|.|+..+.. .|.... ....+++.|.+|+|++.|.|+|+|
T Consensus 5 ~~~P~~~~~~~~s~tsi~v~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~~~~~~v~~~~~~~~l~~L~p~t~Y~v~V~A 84 (102)
T 3n1f_C 5 ITGPHIAYTEAVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYKRDVVEGSKQWHMIGHLQPETSYDIKMQC 84 (102)
T ss_dssp CSCCEEEEEEECSSSCEEEEEECCC-----CCCCEEEEEEEETTCCCGGGCEEEEEETTCSEEEECSCCTTCEEEEEEEE
T ss_pred CCCCceeEEEEcCCCEEEEEeECCChhhcCCccceEEEEEEECCCCCCCceEEEEEcCCceEEECCCCCCCCEEEEEEEE
Confidence 34555677788999999999998863 2334699999999876543 554332 233578999999999999999999
Q ss_pred EecCccCCCccccceE
Q psy7040 130 LNKEGESEPLETFSSI 145 (716)
Q Consensus 130 ~~~~g~~~~s~~~~~~ 145 (716)
.|..|.+..|......
T Consensus 85 ~n~~G~G~~S~~~~~~ 100 (102)
T 3n1f_C 85 FNEGGESEFSNVMICE 100 (102)
T ss_dssp EETTEECCCCCCEEEE
T ss_pred ECCCcCCCCCCCEEee
Confidence 9999999988765443
No 273
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.18 E-value=6.4e-10 Score=100.14 Aligned_cols=160 Identities=13% Similarity=0.042 Sum_probs=105.4
Q ss_pred cEEEecCCeEEEEEE---EeccCCCeEEEEeCCeEec-----------------cCCcEEEEeCCCeEEEEECCCCCCCc
Q psy7040 435 DIKVRAGSNFEFDIN---VIGEPIPTKEWLCNDITII-----------------SKDRFKIVNDDKSTKLKVFDSKRGDS 494 (716)
Q Consensus 435 ~~~~~~g~~~~~~~~---v~~~p~~~~~W~~~~~~~~-----------------~~~~~~~~~~~~~~~l~i~~l~~~~~ 494 (716)
++.+..|+.+.|.|. +.+.|.+.+.|++++.... ....+.+....+...|.|.++...|.
T Consensus 2 ~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 81 (203)
T 4fa8_A 2 AVTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHD 81 (203)
T ss_dssp CCEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGC
T ss_pred CeEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHC
Confidence 467889999999994 6788999999999763211 12234445556778999999999999
Q ss_pred eeEEEEEEcCCCceeeEEEEEEEE---EEEEEeC-CCCCCCCceeeEEEEEEecCCCceeeeEEEccceeee------ec
Q psy7040 495 GIYTLAVKNSWGTDKGTAKVTVLG---CSLKWNP-PEDDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVT------ID 564 (716)
Q Consensus 495 ~~y~~~a~n~~g~~~~s~~~~v~~---v~l~W~~-p~~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~------~~ 564 (716)
|.|+|.|.|..|.......+.+.. +...-.. ....+......|.+... +.|.+.|++.+..... ..
T Consensus 82 G~Y~C~a~n~~g~~~~~~~l~V~~p~~~~~~~~~~~v~~g~~~~l~C~~~G~----P~P~v~W~~~~~~~~~~~~~~~r~ 157 (203)
T 4fa8_A 82 GNYLCRMKLGETEVTKQEHLSVVKPLTLSVHSERSQFPDFSVLTVTCTVNAF----PHPHVQWLMPEGVEPAPTAANGGV 157 (203)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEEEEEEEEEEEECCSSCSCCEEEEEEEEEE----SCCEEEECCC------------CC
T ss_pred eEEEEEEEcCCCcEEEEEEEEecCCceeeecceeEEEcCCCEEEEEEEcCCC----CCCEEEEEECCeeecCcccccceE
Confidence 999999999999888888887772 1111111 11223333445555544 3445999765432210 00
Q ss_pred c--cc-ceeEEEEcCCCCCCeEEEEEEEEcCCCCCcc
Q psy7040 565 N--VD-YFTKITIRPLQRSDTAQYTVTATNSQGKDQV 598 (716)
Q Consensus 565 ~--~~-~~~~~~i~~L~~~~~y~~~v~a~n~~G~~~~ 598 (716)
. .+ ....+.+.++.+.+.+.|+|.|.|..|....
T Consensus 158 ~~~~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~ 194 (203)
T 4fa8_A 158 MKEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAHG 194 (203)
T ss_dssp EECTTSCEEEEEEEEECSSCCCCEEEEEESSSCEEEE
T ss_pred EEeCCCCEEEEEECCCCHHHCEEEEEEEEcCCCEEEE
Confidence 1 11 1133455789999999999999999997543
No 274
>3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene}
Probab=99.18 E-value=2.3e-10 Score=88.95 Aligned_cols=85 Identities=14% Similarity=0.123 Sum_probs=67.3
Q ss_pred CCCCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCCc-EEE-ecccCCCeEEecCCCCCcEEEEEEEEEe
Q psy7040 54 GLDPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETGV-WIP-VGKTREPEMDVTGLTPGHEYKFRVKALN 131 (716)
Q Consensus 54 ~~~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~~-~~~-~~~~~~~~~~i~~L~~~~~y~~~v~a~~ 131 (716)
.+.||.+|++.+++.+++.|+|++|. ..+.+|+|.|+..++.. +.. ......++++|.+|.|++.|.|+|+|.+
T Consensus 4 ~~~~P~~l~v~~~t~~Si~lsW~~p~----~~i~~Y~v~y~~~~~~~~~~~~~v~~~~t~~~l~~L~p~t~Y~v~V~A~~ 79 (97)
T 3qht_C 4 VSSVPTKLEVVAATPTSLLISWDASS----SSVSYYRITYGETGGNSPVQEFTVPGSSSTATISGLSPGVDYTITVYAYY 79 (97)
T ss_dssp -CCSSSSCEEEEEETTEEEEECCCCC----SSCCEEEEEEEESSSCSCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEE
T ss_pred CCCCCCceEEEecCCCEEEEEEeCCC----CCCCEEEEEEEECCCCCccEEEEeCCCcCEEEeCCCCCCCEEEEEEEEEe
Confidence 35788889999999999999999874 35999999998766542 222 2233458999999999999999999999
Q ss_pred cCccCCCcccc
Q psy7040 132 KEGESEPLETF 142 (716)
Q Consensus 132 ~~g~~~~s~~~ 142 (716)
..|.+..+..-
T Consensus 80 ~~G~gp~ss~p 90 (97)
T 3qht_C 80 SYYDLYYSYSP 90 (97)
T ss_dssp EETTEEEECSC
T ss_pred CCccCCCCCCC
Confidence 99988655433
No 275
>3qt2_A Interleukin-5 receptor subunit alpha; cytokine type I receptor fold, fibronectin type III modules, helical bundle, cytokine, ligand-receptor complex; HET: BGC; 2.55A {Homo sapiens} PDB: 3va2_C
Probab=99.18 E-value=2.9e-08 Score=95.28 Aligned_cols=171 Identities=12% Similarity=0.058 Sum_probs=108.4
Q ss_pred CCCCCCCCeEEeEEeCCeEEEEEECCCCCCC-CccceEEEEEEeCCCCCeEEccccCcccceEEEcCCCCCCeEEEEEEE
Q psy7040 222 KPSPPGGPLKVSNVHAEGVTLDWKVPDDDGG-QPIEKYVVDKMDEATGRWTPAGETEGPVTGLEVEGLIPNHKYKFRVRA 300 (716)
Q Consensus 222 ~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~-~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a 300 (716)
...+|.+ +.+...+...+.|+|++|....+ .--..|.+.++..+...|..... .......|..+ |.++|++
T Consensus 11 ~~~pP~n-l~i~~~~~~~~~l~W~~~p~~~~~~~~l~Y~v~~~~~~~~~w~~~~t-----~~~~~~~L~~~--~~~rVrt 82 (317)
T 3qt2_A 11 SLLPPVN-FTIKVTGLAQVLLQWKPNPDQEQRNVNLEYQVKINAPKEDDYETRIT-----ESKAVTILHMG--FSASVRT 82 (317)
T ss_dssp CCCCCEE-EEEEEEETTEEEEEEECCTTSSCSSSCCEEEEEEEESSCEEEEESSS-----EEEEECCCTTC--EEEEEEE
T ss_pred ccCCCcc-eEEEECCCceEEEEECCCCccccCcCcEEEEEEECCCCCcccEeecc-----ccccccccCCC--eEEEEEE
Confidence 3567887 88888888999999998443322 23468999998887888886543 33346667655 8899998
Q ss_pred EcCCCCCC-CCcccceEEecCCCCCCCCCCCcEEEeee-----------CCeEEEEecCCCCCCCccceEEEEEEeecCC
Q psy7040 301 VNKQGKSE-PLTTTASIEAKNPFNQPGKPGTPEIKDFD-----------TDFVELAWTPPEQNGGSPIVGYIIEKKEKYS 368 (716)
Q Consensus 301 ~n~~g~~~-~~~~~~~~~~~~~~~~p~~p~~~~~~~~~-----------~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~ 368 (716)
....|.+. +|..+....-..+..+|..|.++.+.... ...++++|.+-.. . ..-+.|.+.|+..+
T Consensus 83 ~~~~~~s~~~S~w~~~~~~~~~G~p~~~p~nlsC~~~~~~~~~~~~~~~~~~l~CtW~pG~~-~-~~~t~Y~L~y~~~~- 159 (317)
T 3qt2_A 83 ILQNDHSLLASSWASAELHAPPGSPGTSIVNLTCTTNTTEDNYSRLRSYQVSLHCTWMVGTD-A-PEDTQYFLYYRYGS- 159 (317)
T ss_dssp EEECSSCEEECCCEEEEECCCSCBGGGSCEEEEEEEEEEECSCSSSCCEEEEEEEEEECCTT-C-CTTCEEEEEEEETT-
T ss_pred EECCCCCccccccccccccCCCCCCCCcceeeEEEEccccccccccccccceEEEEeeCCCC-C-CCCeeEEEEEEeCC-
Confidence 87765433 45554334333333345678899988666 4689999998322 1 13467999988654
Q ss_pred CceEEEee--ecC--CCCeEEecCCC----CCCeEEEEEEEEeC
Q psy7040 369 PIWEKCAQ--TEG--DTPKGKVLDLI----EGNQYEFRVLAVNK 404 (716)
Q Consensus 369 ~~~~~~~~--~~~--~~~~~~i~~l~----~~~~Y~~~v~a~n~ 404 (716)
.+..+.. ... ....+.+.... ....|.|.|.+.+.
T Consensus 160 -~~~eC~~y~~~~~~~~~~C~f~~~~~~~~~~~~~~i~V~gss~ 202 (317)
T 3qt2_A 160 -WTEECQEYSMDTLGRNIACWFPRTFILSKGRDWLAVLVNGSSK 202 (317)
T ss_dssp -EEEECCCEEECTTSCEEEEEESSCSCCTTCCSEEEEEEEEECT
T ss_pred -CCeeCCccccCCCcceeEEEeCCccccccCcEEEEEEEEcCCC
Confidence 2444421 122 12356666542 24567788776554
No 276
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.17 E-value=8.5e-11 Score=122.05 Aligned_cols=318 Identities=13% Similarity=0.038 Sum_probs=148.2
Q ss_pred ceEEEEec--CCccEEEEeccccCcceEEEEEEEeCCC------------CceeEEEEEEecCC-CCCCCCeEEe-----
Q psy7040 174 MVRKVQHL--DYNTKLGVRMAQRADAGFYTVTAENING------------KDSVEVEVIVLDKP-SPPGGPLKVS----- 233 (716)
Q Consensus 174 ~~~~~~~~--~~~~~l~i~~l~~~~~g~y~c~a~n~~g------------~~~~~~~~~v~~~p-~~p~~~~~~~----- 233 (716)
+|+.+... +....|.|.+++..|+|.|+|.|.|..| .....+.|.|...+ .+|. +...
T Consensus 66 ~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~--i~~~~~~~~ 143 (457)
T 1hzh_H 66 DRVTFTADTSANTAYMELRSLRSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPS--VFPLAPSSK 143 (457)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCCCBCCE--EEEECCCSC
T ss_pred CceEEEEeCCCCEEEEEECCCCcccCEEEEEEEecCCccccccccccccceECCcEEEEecCCCCCCCe--EEecCcccc
Confidence 35555432 3457899999999999999999999876 12345567776532 2222 1111
Q ss_pred EEeCCeEEEEEECCCCCCCCccceEEEEEEeCCCC----CeEEccccCc---ccceEEEcCCCCCCeEEEEEEEEcCCCC
Q psy7040 234 NVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEATG----RWTPAGETEG---PVTGLEVEGLIPNHKYKFRVRAVNKQGK 306 (716)
Q Consensus 234 ~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~----~~~~~~~~~~---~~~~~~i~~L~p~~~y~~~v~a~n~~g~ 306 (716)
...+..++|.|..... .|. ...+.|...+.. .........+ ....+.|.++...+ +.|.|.|.|..+.
T Consensus 144 ~~~g~~v~L~C~~~g~---~P~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~ 218 (457)
T 1hzh_H 144 STSGGTAALGCLVKDY---FPE-PVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSN 218 (457)
T ss_dssp CCTTCCEEEEEEEESB---BSC-CCEEEETTTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGGGT
T ss_pred ccCCCcEEEEEEEeEE---eCC-CeEEEEEeCCEeccceEcCceECCCCCEEEEEEEEecccccCC-ceEEEEEEeCCCC
Confidence 2356778888885321 111 122333222211 0000000101 12368888988888 9999999996654
Q ss_pred CCCCcccceEEecCC---C---CC--CC--CCCCcEEE-------eeeCCeEEEEecCCCCCCCccceEEEEEEeecCCC
Q psy7040 307 SEPLTTTASIEAKNP---F---NQ--PG--KPGTPEIK-------DFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSP 369 (716)
Q Consensus 307 ~~~~~~~~~~~~~~~---~---~~--p~--~p~~~~~~-------~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~ 369 (716)
...... +..... . .. +. .+..+.+. ...+..+.|.|....... .+ ....|.|...+..
T Consensus 219 ~~~~~~---v~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~v~L~C~~~g~~p-~p-~~~~i~W~k~~~~ 293 (457)
T 1hzh_H 219 TKVDKK---AEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSH-ED-PEVKFNWYVDGVE 293 (457)
T ss_dssp EEEEEE---CCCCCSCSSCSCCSCCCCCCSSSCEEEEECCCHHHHHCTTSCCCEEEEEECCCT-TC-CCCEEEEEETTEE
T ss_pred cceeEE---ecccCCCcccccCCCCCccccCCceEEeECcCchhhcccCCceEEEEEEEcccC-CC-CceEEEEEeCCcc
Confidence 211000 000000 0 00 00 00011111 011334555554311100 00 0011222222100
Q ss_pred ---ceEEEeeecCCCCeEEecC---CCCCC---eEEEEEEEEeCCCCCCCCCCCCceEe-ecCCCCCcccccccccEEEe
Q psy7040 370 ---IWEKCAQTEGDTPKGKVLD---LIEGN---QYEFRVLAVNKGGPGEPSDPTAPHIA-RAKKVSPYINRDQLSDIKVR 439 (716)
Q Consensus 370 ---~~~~~~~~~~~~~~~~i~~---l~~~~---~Y~~~v~a~n~~g~~~~s~~~~~~~~-~~~~~~P~~~~~~~~~~~~~ 439 (716)
...... .......+.+.. +...+ ...|+|.|.|..+...... .+.. .....+|.+.........+.
T Consensus 294 ~~~~~~~~~-~~~~~g~~~~~~~l~i~~~d~~d~G~Y~C~a~n~~~~~~~~~---~v~~~~~~~~~P~v~~~~~~~~~~~ 369 (457)
T 1hzh_H 294 VHNAKTKPR-EEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEK---TISKAKGQPREPQVYTLPPSRDELT 369 (457)
T ss_dssp ECCCEEEEE-EECTTSCEEEEEEECCCHHHHHHTCCEEEEEECTTSSSCEEE---EECCCCCCCBCCEEEEECCCGGGGG
T ss_pred ccccccccc-eecCCCcEEEEEEEEECHHHccCCCcEEEEEeCCCCCCcceE---EEEcccCCCCCCeEEEECCCccccC
Confidence 000000 001112232221 22323 5678899987654321110 0100 12234555442222222233
Q ss_pred cCCeEEEEEEEeccCCC--eEEEEeCCeEeccCCcEEEEeCCCe-----EEEEECCCCCCCceeEEEEEEcCCCce
Q psy7040 440 AGSNFEFDINVIGEPIP--TKEWLCNDITIISKDRFKIVNDDKS-----TKLKVFDSKRGDSGIYTLAVKNSWGTD 508 (716)
Q Consensus 440 ~g~~~~~~~~v~~~p~~--~~~W~~~~~~~~~~~~~~~~~~~~~-----~~l~i~~l~~~~~~~y~~~a~n~~g~~ 508 (716)
.|. +.|.|.+.+.+++ .+.|++++..+.......+....+. ..|.+......+.|.|+|.|.|.....
T Consensus 370 ~~~-~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~~ 444 (457)
T 1hzh_H 370 KNQ-VSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHN 444 (457)
T ss_dssp SSE-EEEEEEEEEEBSSCCEEEEEETTEECCCEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSGG
T ss_pred CCc-EEEEEEEEeEECCCCEEEEEECCEECcceeecCceeCCCCCEEEEEEEEEChHHccCCCeEEEEEEECCCCC
Confidence 455 9999999987554 8999999988753221111111111 234454444467899999999987544
No 277
>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens}
Probab=99.17 E-value=1.2e-10 Score=93.08 Aligned_cols=85 Identities=18% Similarity=0.218 Sum_probs=68.8
Q ss_pred ceEEE--EeCCeEEEEecCCCCCCCCccceEEEEEEcCCCCcEEEecccCCCeEEecCCCCCcEEEEEEEEEecCccCCC
Q psy7040 61 LEVSN--IHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETGVWIPVGKTREPEMDVTGLTPGHEYKFRVKALNKEGESEP 138 (716)
Q Consensus 61 l~~~~--~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~~~~g~~~~ 138 (716)
+++.. .+.+++.|+|++|. +.+..|.+|+|+|+..+...|..... ..+.+.|.+|.+++.|.|+|+|.|..|.+.+
T Consensus 14 l~~~~~~~~~~sv~l~W~~p~-~~~g~i~~Y~v~~~~~~~~~~~~~~~-~~~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~ 91 (108)
T 2dm4_A 14 LQLSLPREAEGVIVGHWAPPI-HTHGLIREYIVEYSRSGSKMWASQRA-ASNFTEIKNLLVNTLYTVRVAAVTSRGIGNW 91 (108)
T ss_dssp EEEECCTTCSSCEEEEEECCS-CCSSCEEEEEEEEEETTCSCCEEEEE-SSSEEEECSCCSSCEEEEEEEEEESSCEEEE
T ss_pred eEEEEeccCCCEEEEEEcCCC-CCCCcEEEEEEEEEECCCCCeEEecC-CccEEEeCCCCCCCEEEEEEEEECCCceeCC
Confidence 44344 47889999999997 34456999999999888777765533 3579999999999999999999999999988
Q ss_pred ccccceEEe
Q psy7040 139 LETFSSIIA 147 (716)
Q Consensus 139 s~~~~~~~~ 147 (716)
|......+.
T Consensus 92 S~~~~~~T~ 100 (108)
T 2dm4_A 92 SDSKSITTI 100 (108)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 877666554
No 278
>3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene}
Probab=99.17 E-value=1.9e-10 Score=89.49 Aligned_cols=86 Identities=16% Similarity=0.094 Sum_probs=70.5
Q ss_pred CCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEE
Q psy7040 323 NQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAV 402 (716)
Q Consensus 323 ~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~ 402 (716)
..+.+|.++.+...+.+++.|+|.+|. +.+.+|+|.|...+...+...........++.|.+|.|++.|.|+|+|.
T Consensus 3 t~~~~P~~l~v~~~t~~Si~lsW~~p~----~~i~~Y~v~y~~~~~~~~~~~~~v~~~~t~~~l~~L~p~t~Y~v~V~A~ 78 (97)
T 3qht_C 3 SVSSVPTKLEVVAATPTSLLISWDASS----SSVSYYRITYGETGGNSPVQEFTVPGSSSTATISGLSPGVDYTITVYAY 78 (97)
T ss_dssp --CCSSSSCEEEEEETTEEEEECCCCC----SSCCEEEEEEEESSSCSCCEEEEEETTCCEEEECSCCTTCEEEEEEEEE
T ss_pred CCCCCCCceEEEecCCCEEEEEEeCCC----CCCCEEEEEEEECCCCCccEEEEeCCCcCEEEeCCCCCCCEEEEEEEEE
Confidence 357889999999999999999999863 3689999999887644333444456778999999999999999999999
Q ss_pred eCCCCCCCCC
Q psy7040 403 NKGGPGEPSD 412 (716)
Q Consensus 403 n~~g~~~~s~ 412 (716)
+..|.|+.+.
T Consensus 79 ~~~G~gp~ss 88 (97)
T 3qht_C 79 YSYYDLYYSY 88 (97)
T ss_dssp EEETTEEEEC
T ss_pred eCCccCCCCC
Confidence 9999886543
No 279
>2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens}
Probab=99.17 E-value=1.7e-10 Score=97.74 Aligned_cols=112 Identities=21% Similarity=0.237 Sum_probs=88.2
Q ss_pred cceEEEcCCCCCCeEEEEEEEEcCCCCCCCCcccceEEe-cCCCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceE
Q psy7040 280 VTGLEVEGLIPNHKYKFRVRAVNKQGKSEPLTTTASIEA-KNPFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVG 358 (716)
Q Consensus 280 ~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~~~~~~~~~~-~~~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~ 358 (716)
.+++.+.+++ |+.|.+..+... . .+.. ..+...|.+|.++++..++.+++.|+|++|...+| |.+
T Consensus 117 vts~~vgdg~-g~~~~~~~~~k~----------v-~i~~~tq~ev~p~Pp~NL~At~VT~tSVtLsW~aP~~~~G--I~g 182 (238)
T 2w1n_A 117 VTNSSVGDGE-GLVHEIAGTEKT----------V-NIIEGTSPEIVVNPVRDFKASEINKKNVTVTWTEPETTEG--LEG 182 (238)
T ss_dssp EEEEEEECTT-SCEEECBCEEEE----------E-EEECCCCCCCCCCCCEEEEEEEECSSCEEEEEECCSCCTT--EEE
T ss_pred eeeEEEecCC-CcEEEeecccee----------e-eeccCCCCcCccCCCCceEEEEccCCeEEEEecCCCCCCC--cee
Confidence 4788888898 999988776322 1 1111 12345679999999999999999999999887666 999
Q ss_pred EEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEEeCCCCCCCC
Q psy7040 359 YIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPS 411 (716)
Q Consensus 359 y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s 411 (716)
|+|++.. ......+...++|++.+|++++.|.|+|.|.+..|.+...
T Consensus 183 Y~ly~~g------~~v~~v~~~~tsyt~~gLk~~TeYsF~V~A~d~~G~~Ss~ 229 (238)
T 2w1n_A 183 YILYKDG------KKVAEIGKDETSYTFKKLNRHTIYNFKIAAKYSNGEVSSK 229 (238)
T ss_dssp EEEEETT------EEEEEEETTCCEEEECSCCTTCEEEEEEEEEETTSCBCCC
T ss_pred EEEEeCC------ceeEEeeccceEEEecCCCCCCEEEEEEEEEeCCCCcccc
Confidence 9999854 2334466778999999999999999999999999987544
No 280
>1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.17 E-value=2e-10 Score=92.01 Aligned_cols=98 Identities=13% Similarity=0.071 Sum_probs=75.2
Q ss_pred CCCCCCCCcEEEeeeCCeEEEEecCCCCCCCc---cceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEE
Q psy7040 323 NQPGKPGTPEIKDFDTDFVELAWTPPEQNGGS---PIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRV 399 (716)
Q Consensus 323 ~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~---~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v 399 (716)
.+|.+|.++++...+.++|.|+|.+|...++. .+.+|.|.|+......+. .........++.|.+|+|++.|.|+|
T Consensus 7 ~pp~~P~~l~~~~~s~tsi~lsW~~p~~~~~~~~~~~~~Y~v~y~~~~~~~~~-~~~~~~~~~~~~i~gL~P~T~Y~f~V 85 (113)
T 1x5j_A 7 GPMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTK-YKNANATTLSYLVTGLKPNTLYEFSV 85 (113)
T ss_dssp CCCCCCEEEEEEEEETTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSSCC-CEECCBCSSEEEEESCCTTCEECCEE
T ss_pred CCCCCCcceEEEEecCCEEEEEecCCCCccccccCcCceEEEEEEECCCCCeE-EEEEecCcCEEEeCCCCCCcEEEEEE
Confidence 56788999999999999999999987654431 134999999874322221 22234567899999999999999999
Q ss_pred EEEeCCCCCCCCCCCCceEeec
Q psy7040 400 LAVNKGGPGEPSDPTAPHIARA 421 (716)
Q Consensus 400 ~a~n~~g~~~~s~~~~~~~~~~ 421 (716)
+|.|..|.|.+|......+...
T Consensus 86 ~A~~~~G~g~~S~~v~~~T~~~ 107 (113)
T 1x5j_A 86 MVTKGRRSSTWSMTAHGTTFEL 107 (113)
T ss_dssp EEECSSCBCCCCCCCCEECCCS
T ss_pred EEecCCccCCCcccEEeeccCC
Confidence 9999999999988776655443
No 281
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.17 E-value=1.7e-10 Score=106.85 Aligned_cols=118 Identities=12% Similarity=0.028 Sum_probs=74.4
Q ss_pred eEEEEcCCCCCCeEEEEEEEEcCCCCCccceeeeccCCCCCCcc-ceeeccceeEEEEEEeeEEEEeeeeccCcee----
Q psy7040 570 TKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTDKPSAPEG-PIQWLLTLTDVTWEISNYLQELHSSLMPISL---- 644 (716)
Q Consensus 570 ~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~~~~v~~~p~~~~~-~~~~~~~~v~l~w~i~~y~v~~~~~~~~~~~---- 644 (716)
..+.|.+++..+.+.|+|.|.|..|.......+.++.++..+.. .....+..+. +.|.+.|
T Consensus 83 ~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~--------------l~c~~~g~~P~ 148 (226)
T 4f80_A 83 AALRIHNVTASDSGKYLCYFQDGDFYEKALVELKVAALGSDLHVDVKGYKDGGIH--------------LECRSTGWYPQ 148 (226)
T ss_dssp EEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEEEEEEEETTEEE--------------EEEEEEEEBSC
T ss_pred EEEEEeeCchHHCeeEEEEEECCCcEEEEEEEEeeccceecccceeeeccCCcee--------------eEEEeccCCCC
Confidence 78999999999999999999998776544433333333322221 1112233333 4555554
Q ss_pred -eEEEEeCCeEe-eec-------ccceeeEEEEccCCCCCcEEEEEEEEcCCCCceeeEEEEEecC
Q psy7040 645 -ESQYLMNDKRV-TID-------NVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTDK 701 (716)
Q Consensus 645 -~~~W~~~~~~~-~~~-------~~~~~~~~~i~~l~~~~~y~y~~~a~n~~G~~~~s~~l~v~~~ 701 (716)
.+.|++++..+ ... ..+....+.+..+...|.|+|+|.|.|..|..+.+..|.|.+|
T Consensus 149 p~i~W~k~~~~~~~~~~~~~~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~~v~v~ep 214 (226)
T 4f80_A 149 PQIQWSNNKGENIPTVEAPVVADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGLEKTASISIADP 214 (226)
T ss_dssp CEEEEECTTSCBCCCEECCCEECTTSCEEEEEEEEECC----CEEEEEEETTTTEEEEEEECCCTT
T ss_pred CEEEEEECCceEcCCCceEEEECCCCcEEEEEEEEechhcCcEEEEEEEeCCCCeEEEEEEEECCC
Confidence 89999965433 222 1111133445567889999999999999999999999998764
No 282
>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.16 E-value=2e-10 Score=93.64 Aligned_cols=96 Identities=13% Similarity=0.127 Sum_probs=72.5
Q ss_pred CCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCc---cceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEE
Q psy7040 322 FNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGS---PIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFR 398 (716)
Q Consensus 322 ~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~---~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~ 398 (716)
..+|.+|.++++...+.++|.|+|.+|...++. .+.+|+|+|+..+...+. .........+++|.+|+|++.|.|+
T Consensus 16 ~~pp~~P~~l~~~~~s~tsi~lsW~~p~~~~~~i~~~~~~Y~v~y~~~~~~~~~-~~~~~~~~~~~~v~gL~P~T~Y~f~ 94 (123)
T 2edd_A 16 STPMLPPVGVQAVALTHDAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSASAK-YKSEDTTSLSYTATGLKPNTMYEFS 94 (123)
T ss_dssp CCSSCCCEEEEEEEEETTEEEEEEECSSSCSSCCCSCCCCEEEEEEETTCTTCC-CCCEEESSSEEEEESCCTTCEEEEE
T ss_pred CCCCCCCcceEEEEcCCCeEEEEecCCCCCcccccCcCceEEEEEEECCCCCcc-EEEEeCCceEEEecCCCCCCEEEEE
Confidence 356789999999999999999999987654431 234999999876422211 1122345789999999999999999
Q ss_pred EEEEeCCCCCCCCCCCCceE
Q psy7040 399 VLAVNKGGPGEPSDPTAPHI 418 (716)
Q Consensus 399 v~a~n~~g~~~~s~~~~~~~ 418 (716)
|+|.|..|.|.+|......+
T Consensus 95 V~A~n~~g~g~~S~~v~~~T 114 (123)
T 2edd_A 95 VMVTKNRRSSTWSMTAHATT 114 (123)
T ss_dssp EEECCSSSCCCCCCCEEEEC
T ss_pred EEEeCCCcccCCCCCEEEEc
Confidence 99999999998887654443
No 283
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.16 E-value=4e-10 Score=103.63 Aligned_cols=177 Identities=12% Similarity=0.139 Sum_probs=110.8
Q ss_pred cccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEE
Q psy7040 433 LSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTA 512 (716)
Q Consensus 433 ~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~ 512 (716)
+..+.+..|+.+.|.|.+.+.|.+.+.|++++..+... ....|.|.++...|.|.|+|.|.|..|...
T Consensus 25 p~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~---------~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~--- 92 (218)
T 3k0w_A 25 PESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNG---------NTSELIFNAVHVKDAGFYVCRVNNNFTFEF--- 92 (218)
T ss_dssp CCCEEEETTSBEEEECEETTTTSSEEEEEETTEECTTC---------CSSEEEETTCCGGGCEEEEEEEECTTCCEE---
T ss_pred CCCeEEeCCCcEEEEeeecCCCCCEEEEEECCEECCCC---------CCCEEEEccCChhhCeEeEEEEEcCCCCce---
Confidence 34678999999999999999999999999999887543 245799999999999999999987654210
Q ss_pred EEEEEEEEEEEeCCCCCCCCceeeEEEEEEecCCCceeeeEEEccceeeeeccccceeEEEEcCCCCCCeEEEEEEEEcC
Q psy7040 513 KVTVLGCSLKWNPPEDDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDNVDYFTKITIRPLQRSDTAQYTVTATNS 592 (716)
Q Consensus 513 ~~~v~~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~ 592 (716)
-.. ..+.+...... + ..
T Consensus 93 ---------------------s~~---------------------------------~~l~V~~~~~~--~-------~~ 109 (218)
T 3k0w_A 93 ---------------------SQW---------------------------------SQLDVCDIPES--F-------QR 109 (218)
T ss_dssp ---------------------CCC---------------------------------EEEEEECCCGG--G-------CT
T ss_pred ---------------------eeE---------------------------------EEEEEEccCcc--c-------cc
Confidence 000 11111111000 0 00
Q ss_pred CCCCccceeeeccCCCCCCccceeeccceeEEEEEEeeEEEEeeeeccCcee----eEEEEeCCeEeeecccceeeEEEE
Q psy7040 593 QGKDQVFIEVVVTDKPSAPEGPIQWLLTLTDVTWEISNYLQELHSSLMPISL----ESQYLMNDKRVTIDNVDYFTKITI 668 (716)
Q Consensus 593 ~G~~~~s~~~~v~~~p~~~~~~~~~~~~~v~l~w~i~~y~v~~~~~~~~~~~----~~~W~~~~~~~~~~~~~~~~~~~i 668 (716)
.-.+.......+...|.. .....+..+. |.|.+.| .+.|++++..+... ....|.|
T Consensus 110 ~~~~~~~~~p~~~~~~~~---~~v~~G~~v~--------------L~C~~~g~p~~~v~W~~~~~~~~~~---~~~~L~i 169 (218)
T 3k0w_A 110 SVDGVSESKLQICVEPTS---QKLMPGSTLV--------------LQCVAVGSPIPHYQWFKNELPLTHE---TKKLYMV 169 (218)
T ss_dssp TCCSBCCSSCEEEECCCC---EEECTTCCEE--------------EECEEEBSSCCEEEEEETTEECTTC---CSSEEEE
T ss_pred ccccccCCCceEEECCCc---eeecCCCcEE--------------EEEEecccCCCeEEEEECCEECCCC---CCCEEEE
Confidence 000000000000000100 1111233333 5666655 89999999987654 3468999
Q ss_pred ccCCCCCcEEEEEEEEcCCCC-ceeeEEEEEecCCCC
Q psy7040 669 RPLQRSDTAQYTVTATNSQGK-DQVFIEVVVTDKPSA 704 (716)
Q Consensus 669 ~~l~~~~~y~y~~~a~n~~G~-~~~s~~l~v~~~p~~ 704 (716)
.++...|.|.|+|.|.|..|. .+....|.|...+..
T Consensus 170 ~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~~~~ 206 (218)
T 3k0w_A 170 PYVDLEHQGTYWCHVYNDRDSQDSKKVEIIIDELNNL 206 (218)
T ss_dssp SSCCGGGCEEEEEEEECSSCEEECCCEEEEECC----
T ss_pred eecChhcCEEEEEEEEcCCCCceeeeEEEEEeCCccC
Confidence 999999999999999999888 466778888775443
No 284
>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.16 E-value=3.3e-10 Score=91.68 Aligned_cols=91 Identities=16% Similarity=0.259 Sum_probs=70.3
Q ss_pred CCCCceEEEE--eCCeEEEEecCCCCCCCCccceEEEEEEcCCC---CcEEEec-ccCCCeEEecCCCCCcEEEEEEEEE
Q psy7040 57 PEGPLEVSNI--HKDGCTLKWNKPKDDGGEPLEGYLVEKYDPET---GVWIPVG-KTREPEMDVTGLTPGHEYKFRVKAL 130 (716)
Q Consensus 57 p~~~l~~~~~--~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~---~~~~~~~-~~~~~~~~i~~L~~~~~y~~~v~a~ 130 (716)
||.++.+... +.+++.|+|++|...+| .|.+|.|+|+.... ..|.... ....+++.|.+|.+++.|.|+|+|.
T Consensus 11 ~P~~l~~~~~~~~~~sv~l~W~~p~~~~g-~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~ 89 (114)
T 2ede_A 11 APKDLTVITREGKPRAVIVSWQPPLEANG-KITAYILFYTLDKNIPIDDWIMETISGDRLTHQIMDLNLDTMYYFRIQAR 89 (114)
T ss_dssp CCEEEEEEECSSCSSCEEEEEECCSSCSS-CCSEEEEEEESCSSSCTTTSEEEEEETTCCEEEECSCCSSCEEEEEEEEE
T ss_pred CCcceEEEEccCCCCEEEEEECCCCCCCC-ceeEEEEEEEeCCCCCccceEEEEECCCceEEEEcCCCCCCEEEEEEEEE
Confidence 4444677777 77899999999975444 69999999987543 2444333 3445899999999999999999999
Q ss_pred ecCccCCCccccceEEec
Q psy7040 131 NKEGESEPLETFSSIIAR 148 (716)
Q Consensus 131 ~~~g~~~~s~~~~~~~~~ 148 (716)
|..|.+.++......+..
T Consensus 90 n~~G~g~~S~~~~~~T~~ 107 (114)
T 2ede_A 90 NSKGVGPLSDPILFRTLK 107 (114)
T ss_dssp CSSCBCCCCCCEEEECCC
T ss_pred eCCcCcCCcccEEEEecC
Confidence 999999988877665543
No 285
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.16 E-value=2.3e-11 Score=125.37 Aligned_cols=310 Identities=11% Similarity=-0.018 Sum_probs=153.3
Q ss_pred CccEEEEeccccCcceEEEEEEEeCCCCceeEEEEEEecC-CCCCCCCeEEe-----EEeCCeEEEEEECCCCCCCCccc
Q psy7040 183 YNTKLGVRMAQRADAGFYTVTAENINGKDSVEVEVIVLDK-PSPPGGPLKVS-----NVHAEGVTLDWKVPDDDGGQPIE 256 (716)
Q Consensus 183 ~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~-p~~p~~~~~~~-----~~~~~~~~l~W~~p~~~~~~~~~ 256 (716)
....|.|.+++..|+|.|+|.|.|..+.....+.|.|... +.+|. +... ...+..++|.|..... .|.
T Consensus 76 ~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~P~--i~~~~~~~~~~~G~~v~L~C~~~g~---~P~- 149 (434)
T 1igy_B 76 NTANIHLSSLTSDDSAVYYCVREGEVPYWGQGTTVTVSSAKTTPPS--VYPLAPGSAAQTNSMVTLGCLVKGY---FPE- 149 (434)
T ss_dssp CBBCEEECSBCGGGCSEECCCCSSSSCCCCCCEECEECCSCCBCCC--EEEECCCCCCCCTTEEEEEEEEEEE---BSS-
T ss_pred CEEEEEECCCChHHCEEEEEEEEccccccCCceEEEEccCCCCCCe--EEEcCCccccCCCCcEEEEEEEeee---cCC-
Confidence 4568999999999999999999997655555667777642 23332 2211 1357788999985211 011
Q ss_pred eEEEEEEeCCCCC-eEEccc--cCc---ccceEEEcCCCCCCeEEEEEEEEcCCCCCCCCcccceEEecC------CCCC
Q psy7040 257 KYVVDKMDEATGR-WTPAGE--TEG---PVTGLEVEGLIPNHKYKFRVRAVNKQGKSEPLTTTASIEAKN------PFNQ 324 (716)
Q Consensus 257 ~y~v~~~~~~~~~-~~~~~~--~~~---~~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~~~~~~~~~~~~------~~~~ 324 (716)
...+.|...+... -..... ..+ ....+.|.+....+ +.|.|.|.|..|........ .... ....
T Consensus 150 p~~v~W~k~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~~---~~~~~~~~v~~~~~ 225 (434)
T 1igy_B 150 PVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPS-ETVTCNVAHPASSTKVDKKI---VPRDCGCKPCICTV 225 (434)
T ss_dssp CCEEEETTTTBCSSEEECCCEECSSCEEEEEEEEEETTTTTS-SCCEEEEECTTTTCCEEEEC---CCCCCCCCCCCCCC
T ss_pred CeEEEEeeCCcCCCeEecCceecCCcEEEEEEEEEcchhcCC-CcEEEEEEeCCCCccceeec---cCCCCCCccccCCC
Confidence 1123332222110 000000 000 12457888888777 99999999987753211110 0000 0000
Q ss_pred CCCCCCcEEE-------eeeCCeEEEEecCCCCCCCccceEEEEEEeecCCC-----ceEEEeee---cCCCCeEEecCC
Q psy7040 325 PGKPGTPEIK-------DFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSP-----IWEKCAQT---EGDTPKGKVLDL 389 (716)
Q Consensus 325 p~~p~~~~~~-------~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~-----~~~~~~~~---~~~~~~~~i~~l 389 (716)
+..| .+.+. ...+..+.|.|........ + ....|.|...+.. ........ ......+.|..+
T Consensus 226 ~~~p-~v~~~~p~~~~~v~~G~~~~L~C~~~g~~p~-P-~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~ 302 (434)
T 1igy_B 226 PEVS-SVFIFPPKPKDTLLITVTPKVTCVVVDISKD-D-PEVQFSWFVDNVEVHTAQTQPREEQFNSTFRVVSALPIMHQ 302 (434)
T ss_dssp SSSC-CEEEECCCHHHHHSTTSCCEEEEEECCCCSS-C-CCCCBCBBSSSCCBCCCSCCCCCCCCSSSCCCCCCEECCHH
T ss_pred CcCc-EEEEeCCChHHhcccCCCcEEEEEEeccccC-C-CCeEEEEEeCCcccCCcccCcceeCCCCcEEEEEEEEECHH
Confidence 0000 01111 1123445555544211000 0 0001112111100 00000000 011235677777
Q ss_pred CCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccCC--CeEEEEeCCeEe
Q psy7040 390 IEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPI--PTKEWLCNDITI 467 (716)
Q Consensus 390 ~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~--~~~~W~~~~~~~ 467 (716)
...+...|+|.|.|..|.......... ......+|.+........ ...+..+.|.|.+.+.++ +.+.|++++..+
T Consensus 303 ~~~d~G~Y~C~a~n~~~~~~~~~~v~~--~~~~~~~P~v~~~~~~~~-~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l 379 (434)
T 1igy_B 303 DWLNGKEFKCRVNSAAFPAPIEKTISK--TKGKPRAPQVYTIPPPKE-QMAKDKVSLTCMITDFFPEDITVEWQSDGQAP 379 (434)
T ss_dssp HHHHTCCCBCCBCCSSCSSCCCCCCCC--CCSCCBCCCCEEECCCSS-SSSSSEEEEEEEEEEEBCSCEEEEEEETTSCC
T ss_pred HccCCCcEEEEEECCCCCCceeEEEec--cCCCCcCCEEEEECCCHH-HhcCCcEEEEEEEEeeECCCeEEEEEECCEec
Confidence 666677899999998886532221111 012233555432211111 224667999999988543 389999999877
Q ss_pred ccCCcEEE--EeCCC---eEEEEECCCCCCCceeEEEEEEcCCCce
Q psy7040 468 ISKDRFKI--VNDDK---STKLKVFDSKRGDSGIYTLAVKNSWGTD 508 (716)
Q Consensus 468 ~~~~~~~~--~~~~~---~~~l~i~~l~~~~~~~y~~~a~n~~g~~ 508 (716)
........ ..++. ...|.|.....++.|.|+|.|.|.....
T Consensus 380 ~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~~ 425 (434)
T 1igy_B 380 ENYKNTQPIMDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGLHN 425 (434)
T ss_dssp SCCEECCCCCCSSSCEEEEEEEEEEHHHHHTTCCEEEEEEETTSGG
T ss_pred CCceeccceeCCCCcEEEEEEEEECchhccCCCEEEEEEEcCCCCC
Confidence 43211111 11111 1245666555567899999999987543
No 286
>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.16 E-value=2e-10 Score=92.94 Aligned_cols=94 Identities=26% Similarity=0.380 Sum_probs=74.8
Q ss_pred CCCCCCCCcEEEee--eCCeEEEEecCCCCCCCccceEEEEEEeecCC---CceEEEeeecCCCCeEEecCCCCCCeEEE
Q psy7040 323 NQPGKPGTPEIKDF--DTDFVELAWTPPEQNGGSPIVGYIIEKKEKYS---PIWEKCAQTEGDTPKGKVLDLIEGNQYEF 397 (716)
Q Consensus 323 ~~p~~p~~~~~~~~--~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~---~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~ 397 (716)
.+|.+|.++.+... +.+++.|+|.+|...++ .|.+|.|+|+.... ..|... .......++.|.+|.+++.|.|
T Consensus 7 ~P~~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g-~i~~Y~v~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~L~p~t~Y~~ 84 (114)
T 2ede_A 7 GPTSAPKDLTVITREGKPRAVIVSWQPPLEANG-KITAYILFYTLDKNIPIDDWIME-TISGDRLTHQIMDLNLDTMYYF 84 (114)
T ss_dssp CCCSCCEEEEEEECSSCSSCEEEEEECCSSCSS-CCSEEEEEEESCSSSCTTTSEEE-EEETTCCEEEECSCCSSCEEEE
T ss_pred CCCCCCcceEEEEccCCCCEEEEEECCCCCCCC-ceeEEEEEEEeCCCCCccceEEE-EECCCceEEEEcCCCCCCEEEE
Confidence 34578999999887 77999999999865544 79999999987442 234433 3456788999999999999999
Q ss_pred EEEEEeCCCCCCCCCCCCceE
Q psy7040 398 RVLAVNKGGPGEPSDPTAPHI 418 (716)
Q Consensus 398 ~v~a~n~~g~~~~s~~~~~~~ 418 (716)
+|+|.|..|.|.+|......+
T Consensus 85 ~V~A~n~~G~g~~S~~~~~~T 105 (114)
T 2ede_A 85 RIQARNSKGVGPLSDPILFRT 105 (114)
T ss_dssp EEEEECSSCBCCCCCCEEEEC
T ss_pred EEEEEeCCcCcCCcccEEEEe
Confidence 999999999998887655443
No 287
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.15 E-value=1.5e-09 Score=97.78 Aligned_cols=166 Identities=13% Similarity=0.105 Sum_probs=113.2
Q ss_pred cccEEEecCCeEEEEEEEe-ccCCCeEEEEeCCeEeccCC--cEEEEeCCC-------eEEEEECCCCCCCceeEEEEEE
Q psy7040 433 LSDIKVRAGSNFEFDINVI-GEPIPTKEWLCNDITIISKD--RFKIVNDDK-------STKLKVFDSKRGDSGIYTLAVK 502 (716)
Q Consensus 433 ~~~~~~~~g~~~~~~~~v~-~~p~~~~~W~~~~~~~~~~~--~~~~~~~~~-------~~~l~i~~l~~~~~~~y~~~a~ 502 (716)
+..+.+..|+.+.|.|.+. +.|.+.+.|++++..+.... ++.+..... ...|.|.++...|.|.|+|.|.
T Consensus 9 p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 88 (195)
T 2c5d_C 9 PGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTGQYQCLVF 88 (195)
T ss_dssp CCCEEECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTCEEEEEEEE
T ss_pred hhheEEecCCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCCcEEEEEEE
Confidence 4567899999999999999 99999999999999887653 344444433 5689999999999999999999
Q ss_pred cCCCceeeE-EEEEEE-EEEEEEeCC---CCCCCCceeeEEEEEEecCCCce-eeeEEEccceeeeeccccceeEEEEcC
Q psy7040 503 NSWGTDKGT-AKVTVL-GCSLKWNPP---EDDGGAPIEYYMVEKMETDTGKV-LIKWIRTNDKRVTIDNVDYFTKITIRP 576 (716)
Q Consensus 503 n~~g~~~~s-~~~~v~-~v~l~W~~p---~~~~~~~i~~y~v~~~~~~~~~~-~~~w~~~~~~~~~~~~~~~~~~~~i~~ 576 (716)
|..|..... ..+.+. ...+.-.+. ...+......|.+ .+.+.+ .+.|++.+..............+.|.+
T Consensus 89 ~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~----~g~p~p~~v~W~~~~~~~~~~~~~~~~~~L~i~~ 164 (195)
T 2c5d_C 89 LGHQTFVSQPGYVGLEGLPYFLEEPEDRTVAANTPFNLSCQA----QGPPEPVDLLWLQDAVPLATAPGHGPQRSLHVPG 164 (195)
T ss_dssp ETTEEEECCCEEEEECCSCEEEECCCCEEECTTCCEEEEEEE----ECSSCCCEEEEEESSCBSSSSTTSSCCEEEEECC
T ss_pred eCCCceecccEEEEEecCCeEEcCCCcEEEcCCCEEEEEeEC----CCCCCCCEEEEEECCEeccCCCCcCCCCeEEEcc
Confidence 987764332 555554 111111111 0112222333433 333445 599999877654332223457899999
Q ss_pred CCCCCeEEEEEEEEcCCCCCc-cceeeec
Q psy7040 577 LQRSDTAQYTVTATNSQGKDQ-VFIEVVV 604 (716)
Q Consensus 577 L~~~~~y~~~v~a~n~~G~~~-~s~~~~v 604 (716)
+. +.+.|+|.|.|..|... ....+.|
T Consensus 165 ~~--d~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 165 LN--KTSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp CS--SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred cc--cCceEEEEEEcCCCceEEEEEEEEE
Confidence 88 57999999999998664 4555545
No 288
>3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic}
Probab=99.15 E-value=1.5e-10 Score=90.04 Aligned_cols=83 Identities=28% Similarity=0.522 Sum_probs=66.5
Q ss_pred CCCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCC-CcEEEe-cccCCCeEEecCCCCCcEEEEEEEEEec
Q psy7040 55 LDPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPET-GVWIPV-GKTREPEMDVTGLTPGHEYKFRVKALNK 132 (716)
Q Consensus 55 ~~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~-~~~~~~-~~~~~~~~~i~~L~~~~~y~~~v~a~~~ 132 (716)
++||..|++.+++.+++.|+|++|. .++.+|.|+|+..+. +.+... .....++++|.+|.|++.|.|+|+|.|.
T Consensus 2 lp~P~~l~v~~~t~~Sv~lsW~~p~----~~i~~Y~v~y~~~~~~~~~~~~~~~~~~t~~~l~gL~P~t~Y~~~V~A~~~ 77 (98)
T 3tes_A 2 LPAPKNLVVSEVTEDSLRLSWTAPD----AAFDSFMIQYQESEKVGEAINLTVPGSERSYDLTGLKPGTEYTVSIYGVKG 77 (98)
T ss_dssp BCCCEEEEEESCCSSCEEEEEECCT----TSCSEEEEEEEETTBCSCCEEEEEETTCSEEEECSCCTTCEEEEEEEEEET
T ss_pred CCCCCceEEEecCCCeEEEEecCCc----CccceEEEEEEECCCCCceEEEEcCCCcCEEEECCCCCCCEEEEEEEEEeC
Confidence 4677789999999999999999885 259999999987653 333322 2334589999999999999999999999
Q ss_pred CccCCCccc
Q psy7040 133 EGESEPLET 141 (716)
Q Consensus 133 ~g~~~~s~~ 141 (716)
.|.|.+...
T Consensus 78 ~g~S~p~~~ 86 (98)
T 3tes_A 78 GHRSNPLSA 86 (98)
T ss_dssp TEEBCCEEE
T ss_pred CcccCCEEE
Confidence 998876543
No 289
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.14 E-value=7e-11 Score=105.52 Aligned_cols=113 Identities=14% Similarity=0.120 Sum_probs=82.3
Q ss_pred eEEEEcCCCCCCeEEEEEEEEcCCCCCccceeeeccCCCCCCccceeeccceeEEEEEEeeEEEEeeeeccCcee----e
Q psy7040 570 TKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTDKPSAPEGPIQWLLTLTDVTWEISNYLQELHSSLMPISL----E 645 (716)
Q Consensus 570 ~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~~~~v~~~p~~~~~~~~~~~~~v~l~w~i~~y~v~~~~~~~~~~~----~ 645 (716)
..+.|.+++..+.+.|+|.|.|..| ...+.|...+..+. .....+..+. |.|.+.+ .
T Consensus 68 ~~L~i~~v~~~D~G~Y~C~~~~~~~----~~~l~V~~~~~~~~-~~v~~g~~~~--------------l~C~~~~~p~~~ 128 (184)
T 2ny1_B 68 FPLIIKNLKIEDSDTYICEVEDQKE----EVQLLVFGLTANSD-THLLQGQSLT--------------LTLESPPGSSPS 128 (184)
T ss_dssp CCEEECSCCGGGCEEEEEEETTEEE----EEEEEEEEEEESSC-SEEETTCCEE--------------EEEECCTTCCCE
T ss_pred EEEEEecCCHHHCEEEEEEEEcCCC----cEEEEEEEecCCCC-ceeecCCCEE--------------EEEEcCCCCCCE
Confidence 6699999999999999999998765 22233322221122 2223344554 4455544 8
Q ss_pred EEEEeCCeEeeecccceeeEEEEccCCCCCcEEEEEEEEcCCCCceeeEEEEEecCCCCC
Q psy7040 646 SQYLMNDKRVTIDNVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTDKPSAP 705 (716)
Q Consensus 646 ~~W~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~y~~~a~n~~G~~~~s~~l~v~~~p~~p 705 (716)
+.|++++..+.. ....|.|.++...|+|.|+|.|.|..|....+..|.|...|.+|
T Consensus 129 v~W~~~~~~~~~----~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~p~~~ 184 (184)
T 2ny1_B 129 VQCRSPRGKNIQ----GGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKAS 184 (184)
T ss_dssp EEEECTTSCEEE----ESSEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCC--
T ss_pred EEEEeCCCcccc----CceEEEEecCCcCCCeEEEEEEEECCceEEEEEEEEEEecCCCC
Confidence 999999876532 34789999999999999999999999999999999999988764
No 290
>2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.14 E-value=2.3e-10 Score=90.42 Aligned_cols=83 Identities=23% Similarity=0.358 Sum_probs=66.9
Q ss_pred CCCCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCCcEEEec-ccCCCeEEecCCCCCcEEEEEEEEEec
Q psy7040 54 GLDPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETGVWIPVG-KTREPEMDVTGLTPGHEYKFRVKALNK 132 (716)
Q Consensus 54 ~~~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~-~~~~~~~~i~~L~~~~~y~~~v~a~~~ 132 (716)
.+.||..|++..++.+++.|+|++|. ..+.+|+|+|+..++ .|..+. ....+++.|.+|+|++.|.|+|+|.|.
T Consensus 7 ~p~~P~~l~v~~~~~~sv~lsW~~p~----~~i~~Y~i~y~~~~~-~~~~~~~~~~~ts~~l~~L~p~t~Y~~~V~A~~~ 81 (105)
T 2cum_A 7 GLEAPRDLEAKEVTPRTALLTWTEPP----VRPAGYLLSFHTPGG-QTQEILLPGGITSHQLLGLFPSTSYNARLQAMWG 81 (105)
T ss_dssp TCCCCEEEEEESCCSSCEEEEEECCS----SCCSEEEEEEECTTS-CEEEEEECSSCSEEEECSCCTTCEEEEEEEEEBT
T ss_pred CCCCCCceEEEeccCCEEEEEEcCCC----CccceEEEEEEeCCC-ceEEEEECCCccEEEECCCCCCCEEEEEEEEEeC
Confidence 45566778888999999999999885 259999999987654 565443 234589999999999999999999999
Q ss_pred CccCCCccc
Q psy7040 133 EGESEPLET 141 (716)
Q Consensus 133 ~g~~~~s~~ 141 (716)
.|.+.+...
T Consensus 82 ~g~s~~~~~ 90 (105)
T 2cum_A 82 QSLLPPVST 90 (105)
T ss_dssp TBCCCCEEE
T ss_pred CcccCCEEE
Confidence 998876543
No 291
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.14 E-value=2.9e-09 Score=104.37 Aligned_cols=205 Identities=9% Similarity=0.030 Sum_probs=124.9
Q ss_pred CCCeEEecCCCCCCeEEEEEEEEeCCCC---CCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccCCC
Q psy7040 380 DTPKGKVLDLIEGNQYEFRVLAVNKGGP---GEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIP 456 (716)
Q Consensus 380 ~~~~~~i~~l~~~~~Y~~~v~a~n~~g~---~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~ 456 (716)
....+.|.++...+.+.|+|.|.|..+. +..+.... ..+.....+|.+... +. ..+..|+.+.|.|.+. .+.+
T Consensus 72 ~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s~~~~-l~V~~~~~~p~~~~~-~~-~~v~~G~~v~L~C~~~-~~~~ 147 (316)
T 3vh8_G 72 FQESFNMSPVTTAHAGNYTCRGSHPHSPTGWSAPSNPVV-IMVTGNHRKPSLLAH-PG-PLVKSGERVILQCWSD-IMFE 147 (316)
T ss_dssp BSSCEEECSCCGGGCEEEEEEEBCSSSSSSBCCCCCCEE-EEEECSSCCCEEEEE-SC-SEEETTCCEEEEEEES-SCCS
T ss_pred ceEEEEECCCCcccCeEEEEEEEcCCCCcceecCCCcEE-EEEecCCCCCeEEec-CC-CccCCCCeEEEEEcCC-CCCc
Confidence 4567999999999999999999876543 22222221 222223334554422 12 2378999999999995 4567
Q ss_pred eEEEEeCCeEeccCCcEE-EEeCCCeEEEEECCCCCCCceeEEEEEEcCCCce-----eeEEEEEEE------EEEEEEe
Q psy7040 457 TKEWLCNDITIISKDRFK-IVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTD-----KGTAKVTVL------GCSLKWN 524 (716)
Q Consensus 457 ~~~W~~~~~~~~~~~~~~-~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~-----~~s~~~~v~------~v~l~W~ 524 (716)
.+.|++++..+....... .........|.|.++...|.|.|+|.|.|..|.. +....+.+. .+.+...
T Consensus 148 ~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~~~~p~i~~~~~ 227 (316)
T 3vh8_G 148 HFFLHKEGISKDPSRLVGQIHDGVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPSLSAQPG 227 (316)
T ss_dssp EEEEEETTCCSCCEEEECEEETTEEEEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEECSSCCCEEEEESC
T ss_pred EEEEEECCCccccceeeeeecCCCceEEEEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEecCCCCCCeEEeCCC
Confidence 899999987664221111 1112245689999999999999999999998742 334455554 3333322
Q ss_pred CCCCCCCCceeeEEEEEEecCCCceeeeEEEccceeeeec------cccceeEEEEcCCCCCCeEEEEEEEEcCCCC
Q psy7040 525 PPEDDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTID------NVDYFTKITIRPLQRSDTAQYTVTATNSQGK 595 (716)
Q Consensus 525 ~p~~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~------~~~~~~~~~i~~L~~~~~y~~~v~a~n~~G~ 595 (716)
.....+......|.+. .+.+...|++.+....... .......+.|.++. +.+.|+|.|.|..+.
T Consensus 228 ~~v~~G~~v~L~C~~~-----~~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--D~G~Y~C~a~n~~~~ 297 (316)
T 3vh8_G 228 PKVQAGESVTLSCSSR-----SSYDMYHLSREGGAHERRLPAVRKVNRTFQADFPLGPAT--HGGTYRCFGSFRHSP 297 (316)
T ss_dssp SCCCTTSCCEEEEEES-----SCCSEEEEEETTSSCCEEEECEECTTSCEEEEEECC-------CEEEEEEEBTTBT
T ss_pred CeecCCCcEEEEEECC-----CCCcEEEEEECCCcCCCceeceeccCCceeEEEEcCCcC--CCEEEEEEeecCCCc
Confidence 1222333334455443 2334599999876543211 11123678888888 899999999998764
No 292
>1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.14 E-value=2.1e-10 Score=91.85 Aligned_cols=95 Identities=17% Similarity=0.091 Sum_probs=70.8
Q ss_pred CCCCCCceEEEEeCCeEEEEecCCCCCCCC---ccceEEEEEEcCCCCcEE-EecccCCCeEEecCCCCCcEEEEEEEEE
Q psy7040 55 LDPEGPLEVSNIHKDGCTLKWNKPKDDGGE---PLEGYLVEKYDPETGVWI-PVGKTREPEMDVTGLTPGHEYKFRVKAL 130 (716)
Q Consensus 55 ~~p~~~l~~~~~~~~s~~l~W~~p~~~~~~---~i~~y~v~~~~~~~~~~~-~~~~~~~~~~~i~~L~~~~~y~~~v~a~ 130 (716)
+.||..|++..++.++|.|+|.+|...++. .+.+|.|.|+......+. .......++++|.||+|++.|.|+|+|.
T Consensus 9 p~~P~~l~~~~~s~tsi~lsW~~p~~~~~~~~~~~~~Y~v~y~~~~~~~~~~~~~~~~~~~~~i~gL~P~T~Y~f~V~A~ 88 (113)
T 1x5j_A 9 MMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANATTLSYLVTGLKPNTLYEFSVMVT 88 (113)
T ss_dssp CCCCEEEEEEEEETTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSSCCCEECCBCSSEEEEESCCTTCEECCEEEEE
T ss_pred CCCCcceEEEEecCCEEEEEecCCCCccccccCcCceEEEEEEECCCCCeEEEEEecCcCEEEeCCCCCCcEEEEEEEEe
Confidence 345555888899999999999988654332 144999999863222221 1122345799999999999999999999
Q ss_pred ecCccCCCccccceEEecC
Q psy7040 131 NKEGESEPLETFSSIIARD 149 (716)
Q Consensus 131 ~~~g~~~~s~~~~~~~~~~ 149 (716)
+..|.+.+|......+...
T Consensus 89 ~~~G~g~~S~~v~~~T~~~ 107 (113)
T 1x5j_A 89 KGRRSSTWSMTAHGTTFEL 107 (113)
T ss_dssp CSSCBCCCCCCCCEECCCS
T ss_pred cCCccCCCcccEEeeccCC
Confidence 9999999998887776654
No 293
>1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.14 E-value=3.3e-10 Score=91.41 Aligned_cols=96 Identities=18% Similarity=0.247 Sum_probs=71.5
Q ss_pred ecCCCCCCC-CCCCcEEEeeeCCeEEEEecCCC-CCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeE
Q psy7040 318 AKNPFNQPG-KPGTPEIKDFDTDFVELAWTPPE-QNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQY 395 (716)
Q Consensus 318 ~~~~~~~p~-~p~~~~~~~~~~~~i~l~W~~p~-~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y 395 (716)
+.+...+|. +|.++.+.. ..++|.|+|++|. ...++.|.+|+|+|+..+...+.. .......+.+. |.+++.|
T Consensus 11 ~~T~e~~P~~~P~~v~~~~-~~~si~l~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~---~~~~~~~~~~~-L~~~t~Y 85 (117)
T 1wj3_A 11 VTTKKTPPSQPPGNVVWNA-TDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQV---LNTNKTSAELV-LPIKEDY 85 (117)
T ss_dssp CCCSCCCCCCCCCSCBCCE-ETTEEEEECCCCCCCSSSCCEEEEEEEEEESSCSSCEE---EEESSSEEEEE-CCCSSCE
T ss_pred EEecCCCCCCCCccEEEEE-eCCEEEEEEcCCCccccCCceeEEEEEEEECCCCCCeE---EeCCCcEEEEE-CCCCCEE
Confidence 334446666 678888776 8889999999973 234558999999998776444422 22344677787 9999999
Q ss_pred EEEEEEEeCCCCCCCCCCCCceE
Q psy7040 396 EFRVLAVNKGGPGEPSDPTAPHI 418 (716)
Q Consensus 396 ~~~v~a~n~~g~~~~s~~~~~~~ 418 (716)
.|+|+|+|..|.|.++....+.+
T Consensus 86 ~~~V~A~n~~G~Gp~S~~v~~~T 108 (117)
T 1wj3_A 86 IIEVKATTDGGDGTSSEQIRIPR 108 (117)
T ss_dssp EEEEEEEESSCCCCBCCCEEECC
T ss_pred EEEEEEECCCccCCCCCCEEEEc
Confidence 99999999999999886544433
No 294
>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C
Probab=99.14 E-value=2.3e-10 Score=89.74 Aligned_cols=87 Identities=22% Similarity=0.321 Sum_probs=69.6
Q ss_pred CCCCCcEEEeeeCCeEEEEecCCCC-CCCccceEEEEEEeecCCC---ceEEEeeecCCCCeEEecCCCCCCeEEEEEEE
Q psy7040 326 GKPGTPEIKDFDTDFVELAWTPPEQ-NGGSPIVGYIIEKKEKYSP---IWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLA 401 (716)
Q Consensus 326 ~~p~~~~~~~~~~~~i~l~W~~p~~-~~~~~i~~y~v~~~~~~~~---~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a 401 (716)
.+|.++.+...+.+++.|+|.+|.. ..++.|.+|.|.|+..+.. .|.... ......++.|.+|+|++.|.|+|+|
T Consensus 6 ~~P~~~~~~~~s~tsi~v~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~~~~~~-v~~~~~~~~l~~L~p~t~Y~v~V~A 84 (102)
T 3n1f_C 6 TGPHIAYTEAVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYKRDV-VEGSKQWHMIGHLQPETSYDIKMQC 84 (102)
T ss_dssp SCCEEEEEEECSSSCEEEEEECCC-----CCCCEEEEEEEETTCCCGGGCEEEE-EETTCSEEEECSCCTTCEEEEEEEE
T ss_pred CCCceeEEEEcCCCEEEEEeECCChhhcCCccceEEEEEEECCCCCCCceEEEE-EcCCceEEECCCCCCCCEEEEEEEE
Confidence 4788899999999999999999753 3445899999999987643 454433 3446678999999999999999999
Q ss_pred EeCCCCCCCCCC
Q psy7040 402 VNKGGPGEPSDP 413 (716)
Q Consensus 402 ~n~~g~~~~s~~ 413 (716)
+|..|.|+.|..
T Consensus 85 ~n~~G~G~~S~~ 96 (102)
T 3n1f_C 85 FNEGGESEFSNV 96 (102)
T ss_dssp EETTEECCCCCC
T ss_pred ECCCcCCCCCCC
Confidence 999999998865
No 295
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.14 E-value=8.9e-10 Score=108.72 Aligned_cols=222 Identities=10% Similarity=-0.006 Sum_probs=135.5
Q ss_pred ccceEEEcCCCCCCeE-EEEEEEEcCCCCCCCCcccceEEecCCCCCCCCCCCcEEE----eeeCCeEEEEecCCCCCCC
Q psy7040 279 PVTGLEVEGLIPNHKY-KFRVRAVNKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIK----DFDTDFVELAWTPPEQNGG 353 (716)
Q Consensus 279 ~~~~~~i~~L~p~~~y-~~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~----~~~~~~i~l~W~~p~~~~~ 353 (716)
....+.|.++...+.+ .|+|.|.|..|........ ..... | |..+... ...+..+.|.|.....+.
T Consensus 87 ~~~~L~i~~v~~~D~Gs~Y~C~a~n~~g~~~~~~~~--~v~~~----~--p~~~~~~~~~~~~~G~~v~L~C~~~g~p~- 157 (329)
T 3oq3_B 87 KNGDLWIANYTSNDSHRRYLCTVTTKNGDCVQGIVR--SHIRK----P--PSCIPETYELGTHDKYGIDLYCGILYAKH- 157 (329)
T ss_dssp ETTEEEESSCCGGGGGCCEEEEEECTTSCEEEEEEE--EEECC----C--CSCEEEEEETTSSTTTCEEEECCCCSCCC-
T ss_pred ecceEEEcCCChHhCCCcEEEEEEeCCCceeeEEEE--EEEcC----C--CcEeccccceEEeCCCcEEEEeccCCCCC-
Confidence 3578999999999999 8999999988753221111 11111 1 2211111 122557888887632210
Q ss_pred ccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEEeC--CCCCCCCCC-CCceEeecCCCC--Ccc
Q psy7040 354 SPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNK--GGPGEPSDP-TAPHIARAKKVS--PYI 428 (716)
Q Consensus 354 ~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~--~g~~~~s~~-~~~~~~~~~~~~--P~~ 428 (716)
... +.|...+................+.|.++...+.+.|+|.|.|. .|....... .....+...+.. |.+
T Consensus 158 --~~~--i~W~k~~~~l~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~~~~~~ 233 (329)
T 3oq3_B 158 --YNN--ITWYKNNQELIIDGTKYSQSGQNLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDHRFKLI 233 (329)
T ss_dssp --CCE--EEEEETTEECCCSSSSEEEETTEEEECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCCCCEEEE
T ss_pred --Cce--EEEEECCccCCCCCceEecCCCEEEEeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECCCCCCCcee
Confidence 111 22322220000000000011467899999999999999999997 554322211 011122221111 222
Q ss_pred cccccccEEEecCCeEEEEEEEeccC---CC-eEEEEeCCeEe-ccCCcEEEE--eCC--CeEEEEECCCCCCCce-eEE
Q psy7040 429 NRDQLSDIKVRAGSNFEFDINVIGEP---IP-TKEWLCNDITI-ISKDRFKIV--NDD--KSTKLKVFDSKRGDSG-IYT 498 (716)
Q Consensus 429 ~~~~~~~~~~~~g~~~~~~~~v~~~p---~~-~~~W~~~~~~~-~~~~~~~~~--~~~--~~~~l~i~~l~~~~~~-~y~ 498 (716)
.+....+..|..+.|.|.+.+.| .+ .+.|++++..+ ......... ..+ ....|.|.++...|.| .|+
T Consensus 234 ---~~~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~~Y~ 310 (329)
T 3oq3_B 234 ---LDPKINVTIGEPANITCTAVSTSLLVDDVLIDWENPSGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYT 310 (329)
T ss_dssp ---CCSEEEECTTSCEEEEEEEEETTCCTTCCEEEEECTTSCBCCBCSSEEEEEEEETTEEEEEEEESSCCGGGTTCEEE
T ss_pred ---cCCeeEEecCCCEEEEEEEEECCCCCCCcEEEEEECCeeeeccCCceeeeecccCceeEeEEEEEeccHHHCCCcEE
Confidence 34457899999999999999998 77 88999998874 333322221 111 3568999999999999 999
Q ss_pred EEEEcCCCceeeEEEEEE
Q psy7040 499 LAVKNSWGTDKGTAKVTV 516 (716)
Q Consensus 499 ~~a~n~~g~~~~s~~~~v 516 (716)
|.|.|..|....++.+.+
T Consensus 311 C~a~N~~G~~~~~~~l~v 328 (329)
T 3oq3_B 311 CRGHNYYFDKTLTTTVVL 328 (329)
T ss_dssp EEEECSSCEEEEEEEEEE
T ss_pred EEEEecCCceEEEEEEEe
Confidence 999999999888877665
No 296
>3g9v_A Interleukin 22 receptor, alpha 2; cytokine, cytokine receptor, receptor, glycoprotein, polymorphism, secreted, cytokine/cytokine receptor complex; 2.76A {Homo sapiens}
Probab=99.14 E-value=7.7e-11 Score=106.23 Aligned_cols=170 Identities=14% Similarity=0.050 Sum_probs=96.7
Q ss_pred CCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCCCCCeEEcccc-CcccceEEEcC--CCCCCeEEEEEEEEc
Q psy7040 226 PGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEATGRWTPAGET-EGPVTGLEVEG--LIPNHKYKFRVRAVN 302 (716)
Q Consensus 226 p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~-~~~~~~~~i~~--L~p~~~y~~~v~a~n 302 (716)
|.+ +.+.... ....|+|+++....+ ....|.|+|+..+...|...... ......+.|.+ +.+...|.+||+|.+
T Consensus 11 P~n-v~~~s~n-~~~iL~W~p~~~~~~-~~~~Y~Vqy~~~~~~~W~~~~~C~~i~~~~Cdlt~~~~~~~~~Y~~RV~A~~ 87 (211)
T 3g9v_A 11 PQR-VQFQSRN-FHNILQWQPGRALTG-NSSVYFVQYKIYGQRQWKNKEDCWGTQELSCDLTSETSDIQEPYYGRVRAAS 87 (211)
T ss_dssp CEE-EEEEEET-TEEEEEEECCCC----CCCEEEEEEEETTCSSCEEEEEEEEECCSEEECTGGGCSTTSCEEEEEEEEE
T ss_pred Cce-eEEEEEc-CceEEEECCCCCCCC-CCeEEEEEEEECCCCceEECccCCCCCCCEECCCCcccccCccEEEEEEEEC
Confidence 665 6775544 445699997654333 26789999998877788744211 13346677754 578999999999999
Q ss_pred CCCCCCCCcccceEEecCCCCCCCCCCCcEEEeeeCCeEEEEecCCCC----CCCc-------cceEEEEEEeecCCCce
Q psy7040 303 KQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDFDTDFVELAWTPPEQ----NGGS-------PIVGYIIEKKEKYSPIW 371 (716)
Q Consensus 303 ~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~----~~~~-------~i~~y~v~~~~~~~~~~ 371 (716)
..+.|.++......... ...+++| .+.+.... .+|.|.|.+|.. .+|. ....|+|.|...++...
T Consensus 88 ~~~~S~ws~~~~f~~~~--~t~i~PP-~v~v~~~~-~si~V~~~~P~~~~~~~ng~~~~~~~~~~l~Y~v~y~~~~~~~~ 163 (211)
T 3g9v_A 88 AGSYSEWSMTPRFTPWW--ETKIDPP-VMNITQVN-GSLLVILHAPNLPYRYQKEKNVSIEDYYELLYRVFIINNSLEKE 163 (211)
T ss_dssp TTEECCCEECCCBCHHH--HCBCCCC-EEECC------CCCEEECCCCGGGGCSSCSSCHHHHTTCEEEEEEC------C
T ss_pred CCCcCCCEecCcccccc--cCccCCC-EEEEEEcC-CEEEEEEECCCCccccCCCceeeehhcceeEEEEEEEECCCccE
Confidence 88877665443222211 1234555 37776554 589999999875 3332 13679999987653321
Q ss_pred EEEeeecCCCCeEEecCCCCCCeEEEEEEEEeC
Q psy7040 372 EKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNK 404 (716)
Q Consensus 372 ~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~ 404 (716)
. .........+.|.+|.|++.|.|+|+|...
T Consensus 164 ~--~~~~~~~~~~~i~~L~p~t~Ycv~V~a~~~ 194 (211)
T 3g9v_A 164 Q--KVYEGAHRAVEIEALTPHSSYCVVAEIYQP 194 (211)
T ss_dssp E--EEEEESSCCCC----------CEEEEEEET
T ss_pred E--EEEecCCcEEEEecCCCCCeEEEEEEEEeC
Confidence 1 122346678899999999999999999964
No 297
>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.14 E-value=2.9e-10 Score=93.00 Aligned_cols=92 Identities=27% Similarity=0.360 Sum_probs=75.6
Q ss_pred ecCCCCCCCCeEEeEEeCCeEEEEEECCC-CCCCCccceEEEEEEeCCCCCeEEccccCcccceEEEcCCCCCCeEEEEE
Q psy7040 220 LDKPSPPGGPLKVSNVHAEGVTLDWKVPD-DDGGQPIEKYVVDKMDEATGRWTPAGETEGPVTGLEVEGLIPNHKYKFRV 298 (716)
Q Consensus 220 ~~~p~~p~~~~~~~~~~~~~~~l~W~~p~-~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v 298 (716)
..+|.+|.+ +.+.....+++.|+|++|. ..++ ++.+|.|+++......|............+.|.+|.|++.|.|+|
T Consensus 15 ~~~P~~P~~-l~~~~~~~~sv~l~W~~p~~~~~g-~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V 92 (120)
T 1x5f_A 15 GPLPSAPRD-VVASLVSTRFIKLTWRTPASDPHG-DNLTYSVFYTKEGIARERVENTSHPGEMQVTIQNLMPATVYIFRV 92 (120)
T ss_dssp CCCCCCCEE-EEEEEECSSCEEEEEECCSSCSSC-CSSEEEEEEEETTCCCCEEEECSSTTCSEEEECSCCTTCEEEEEE
T ss_pred CCCCCCCCC-cEEEecCCCEEEEEECCCCCCCCC-cEEEEEEEEEECCCCCceEEEeccCCccEEEeCCCCCCCEEEEEE
Confidence 356777777 7888888999999999987 5555 799999999887666666555444568899999999999999999
Q ss_pred EEEcCCCCCCCCccc
Q psy7040 299 RAVNKQGKSEPLTTT 313 (716)
Q Consensus 299 ~a~n~~g~~~~~~~~ 313 (716)
+|.|..|.+.++...
T Consensus 93 ~A~n~~G~g~~S~~~ 107 (120)
T 1x5f_A 93 MAQNKHGSGESSAPL 107 (120)
T ss_dssp EEECSSCEEEECCCE
T ss_pred EEECCCccCCCCCCE
Confidence 999999987776654
No 298
>3g9v_A Interleukin 22 receptor, alpha 2; cytokine, cytokine receptor, receptor, glycoprotein, polymorphism, secreted, cytokine/cytokine receptor complex; 2.76A {Homo sapiens}
Probab=99.14 E-value=1.7e-10 Score=104.08 Aligned_cols=170 Identities=18% Similarity=0.141 Sum_probs=98.6
Q ss_pred CCCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCCcEE---EecccCCCeEEecC--CCCCcEEEEEEEE
Q psy7040 55 LDPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETGVWI---PVGKTREPEMDVTG--LTPGHEYKFRVKA 129 (716)
Q Consensus 55 ~~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~---~~~~~~~~~~~i~~--L~~~~~y~~~v~a 129 (716)
+++|.++++....-..+ |+|+++....+ .+..|.|+|+..+...|. .|.....+.+.|++ +.+...|.+||+|
T Consensus 8 lp~P~nv~~~s~n~~~i-L~W~p~~~~~~-~~~~Y~Vqy~~~~~~~W~~~~~C~~i~~~~Cdlt~~~~~~~~~Y~~RV~A 85 (211)
T 3g9v_A 8 SLKPQRVQFQSRNFHNI-LQWQPGRALTG-NSSVYFVQYKIYGQRQWKNKEDCWGTQELSCDLTSETSDIQEPYYGRVRA 85 (211)
T ss_dssp -CCCEEEEEEEETTEEE-EEEECCCC----CCCEEEEEEEETTCSSCEEEEEEEEECCSEEECTGGGCSTTSCEEEEEEE
T ss_pred CCCCceeEEEEEcCceE-EEECCCCCCCC-CCeEEEEEEEECCCCceEECccCCCCCCCEECCCCcccccCccEEEEEEE
Confidence 45566677766666555 99998764322 267899999988777887 45556667888875 4788999999999
Q ss_pred EecCccCCCccccceEEecCCCCcccccccccceecccCCCCCCceEEEEecCCccEEEEeccccCcceEEEEEEEeCCC
Q psy7040 130 LNKEGESEPLETFSSIIARDPYSKYTSVSSLDSHKRSNQPCGSGMVRKVQHLDYNTKLGVRMAQRADAGFYTVTAENING 209 (716)
Q Consensus 130 ~~~~g~~~~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~G~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g 209 (716)
.++.+.|.++....+....
T Consensus 86 ~~~~~~S~ws~~~~f~~~~------------------------------------------------------------- 104 (211)
T 3g9v_A 86 ASAGSYSEWSMTPRFTPWW------------------------------------------------------------- 104 (211)
T ss_dssp EETTEECCCEECCCBCHHH-------------------------------------------------------------
T ss_pred ECCCCcCCCEecCcccccc-------------------------------------------------------------
Confidence 9988888766443221110
Q ss_pred CceeEEEEEEecCCCCCCCCeEEeEEeCCeEEEEEECCCC----CCCCc-------cceEEEEEEeCCCCCeEEccccCc
Q psy7040 210 KDSVEVEVIVLDKPSPPGGPLKVSNVHAEGVTLDWKVPDD----DGGQP-------IEKYVVDKMDEATGRWTPAGETEG 278 (716)
Q Consensus 210 ~~~~~~~~~v~~~p~~p~~~~~~~~~~~~~~~l~W~~p~~----~~~~~-------~~~y~v~~~~~~~~~~~~~~~~~~ 278 (716)
...+.||. +.+... ++++.|.|.+|.. .+|.. ...|.|.+...+...-.... ..
T Consensus 105 ----------~t~i~PP~--v~v~~~-~~si~V~~~~P~~~~~~~ng~~~~~~~~~~l~Y~v~y~~~~~~~~~~~~--~~ 169 (211)
T 3g9v_A 105 ----------ETKIDPPV--MNITQV-NGSLLVILHAPNLPYRYQKEKNVSIEDYYELLYRVFIINNSLEKEQKVY--EG 169 (211)
T ss_dssp ----------HCBCCCCE--EECC------CCCEEECCCCGGGGCSSCSSCHHHHTTCEEEEEEC------CEEEE--EE
T ss_pred ----------cCccCCCE--EEEEEc-CCEEEEEEECCCCccccCCCceeeehhcceeEEEEEEEECCCccEEEEE--ec
Confidence 02344553 555544 3589999998875 23321 35698888655433211111 13
Q ss_pred ccceEEEcCCCCCCeEEEEEEEEc
Q psy7040 279 PVTGLEVEGLIPNHKYKFRVRAVN 302 (716)
Q Consensus 279 ~~~~~~i~~L~p~~~y~~~v~a~n 302 (716)
....+.|.+|.|++.|.++|+|..
T Consensus 170 ~~~~~~i~~L~p~t~Ycv~V~a~~ 193 (211)
T 3g9v_A 170 AHRAVEIEALTPHSSYCVVAEIYQ 193 (211)
T ss_dssp SSCCCC----------CEEEEEEE
T ss_pred CCcEEEEecCCCCCeEEEEEEEEe
Confidence 457889999999999999999985
No 299
>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens}
Probab=99.13 E-value=1.7e-10 Score=90.34 Aligned_cols=84 Identities=20% Similarity=0.307 Sum_probs=68.2
Q ss_pred CCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEEeC
Q psy7040 325 PGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNK 404 (716)
Q Consensus 325 p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~ 404 (716)
|.+|.++.+...+.+++.|+|.+|.. .+.+|.|+|+..+...............++.|.+|.|++.|.|+|+|.|.
T Consensus 2 p~~P~~l~~~~~~~~sv~lsW~pP~~----~i~~Y~v~y~~~~~~~~~~~~~~~~~~t~~~i~~L~p~t~Y~~~V~A~n~ 77 (100)
T 3b83_A 2 LQPPFNIKVTNITLTTAVVTWQPPIL----PIEGILVTFGRKNDPSDETTVDLTSSITSLTLTNLEPNTTYEIRIVARNG 77 (100)
T ss_dssp CCCCEEEEEESCCSSCEEEEEECCSS----CCSEEEEEEEESSCTTTCEEEEECTTEEEEEECSCCTTCEEEEEEEEEET
T ss_pred CccCCccEEEEecCCEEEEEEcCCcc----cCCEEEEEEEECCCCCCceEEEECCcceEEEECCCCCCCEEEEEEEEEeC
Confidence 67899999999999999999999753 58999999987653222222334567889999999999999999999999
Q ss_pred CCCCCCCC
Q psy7040 405 GGPGEPSD 412 (716)
Q Consensus 405 ~g~~~~s~ 412 (716)
.|.|.++.
T Consensus 78 ~g~s~p~~ 85 (100)
T 3b83_A 78 QQYSPPVS 85 (100)
T ss_dssp TEECCCEE
T ss_pred CCCCCCEE
Confidence 99876653
No 300
>2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens}
Probab=99.13 E-value=4.5e-10 Score=95.16 Aligned_cols=78 Identities=26% Similarity=0.438 Sum_probs=62.1
Q ss_pred CCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCCcEEEecccCCCeEEecCCCCCcEEEEEEEEEecCcc
Q psy7040 56 DPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETGVWIPVGKTREPEMDVTGLTPGHEYKFRVKALNKEGE 135 (716)
Q Consensus 56 ~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~~~~g~ 135 (716)
.||.+|++.+++.+++.|+|++|....| |.+|+|++.. ..........++|++.+|.++|.|.|+|.|.+.+|.
T Consensus 152 ~Pp~NL~At~VT~tSVtLsW~aP~~~~G--I~gY~ly~~g----~~v~~v~~~~tsyt~~gLk~~TeYsF~V~A~d~~G~ 225 (238)
T 2w1n_A 152 NPVRDFKASEINKKNVTVTWTEPETTEG--LEGYILYKDG----KKVAEIGKDETSYTFKKLNRHTIYNFKIAAKYSNGE 225 (238)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSCCTT--EEEEEEEETT----EEEEEEETTCCEEEECSCCTTCEEEEEEEEEETTSC
T ss_pred CCCCceEEEEccCCeEEEEecCCCCCCC--ceeEEEEeCC----ceeEEeeccceEEEecCCCCCCEEEEEEEEEeCCCC
Confidence 4566689999999999999999986555 9999998743 111122233489999999999999999999999997
Q ss_pred CCCc
Q psy7040 136 SEPL 139 (716)
Q Consensus 136 ~~~s 139 (716)
....
T Consensus 226 ~Ss~ 229 (238)
T 2w1n_A 226 VSSK 229 (238)
T ss_dssp BCCC
T ss_pred cccc
Confidence 6555
No 301
>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.13 E-value=8.7e-10 Score=89.84 Aligned_cols=92 Identities=15% Similarity=0.289 Sum_probs=71.7
Q ss_pred CCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCC--cEEEec-ccCCCeEEecCCCCCcEEEEEEEEEec
Q psy7040 56 DPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETG--VWIPVG-KTREPEMDVTGLTPGHEYKFRVKALNK 132 (716)
Q Consensus 56 ~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~--~~~~~~-~~~~~~~~i~~L~~~~~y~~~v~a~~~ 132 (716)
.||..+++..++.+++.|+|++|.. ..|.+|+|+|+..+.. .+.... ....+++.|.+|.+++.|.|+|+|.|.
T Consensus 20 ~~P~~l~~~~~~~~sv~l~W~~p~~---g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~ 96 (119)
T 2ee2_A 20 EAPTEVGVKVLSSSEISVHWEHVLE---KIVESYQIRYWAAHDKEEAANRVQVTSQEYSARLENLLPDTQYFIEVGACNS 96 (119)
T ss_dssp CCCCSCEEEEEETTEEEEECCCCSC---TTCCEEEEEEEESSSCGGGCEEEEEETTCSEEEECSCCTTCEEEEEEEEECS
T ss_pred CCCCcEEEEEccCCEEEEEecCCCC---CccceEEEEEEECCCcccCcEEEEcCCCEeEEEECCCCCCCEEEEEEEEEcC
Confidence 3455788999999999999999874 4599999999776532 222222 233479999999999999999999999
Q ss_pred CccCCCccccceEEecCC
Q psy7040 133 EGESEPLETFSSIIARDP 150 (716)
Q Consensus 133 ~g~~~~s~~~~~~~~~~p 150 (716)
.|.+.++......+...+
T Consensus 97 ~G~g~~S~~~~~~T~~~~ 114 (119)
T 2ee2_A 97 AGCGPPSDMIEAFTKKAS 114 (119)
T ss_dssp SSCCCCCCCEEEECCCCC
T ss_pred CccCCCCCCEEEECCCCC
Confidence 999998877766665433
No 302
>2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A
Probab=99.13 E-value=1.6e-10 Score=91.18 Aligned_cols=84 Identities=19% Similarity=0.389 Sum_probs=66.1
Q ss_pred CCCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCC-CCcEEEe-cccCCCeEEecCCCCCcEEEEEEEEEec
Q psy7040 55 LDPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPE-TGVWIPV-GKTREPEMDVTGLTPGHEYKFRVKALNK 132 (716)
Q Consensus 55 ~~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~-~~~~~~~-~~~~~~~~~i~~L~~~~~y~~~v~a~~~ 132 (716)
+.||..|.+..++.+++.|+|++|. ..+.+|+|.|+... .+.+... .....++++|.+|+|++.|.|+|+|.|.
T Consensus 3 p~~P~~l~v~~~t~~sv~lsW~~p~----~~i~~Y~v~y~~~~~~~~~~~~~v~~~~~~~~l~~L~p~t~Y~~~V~A~~~ 78 (104)
T 2rb8_A 3 LDAPSQIEVKDVTDTTALITWMPPS----QPVDGFELTYGIKDVPGDRTTIDLTEDENQYSIGNLKPDTEYEVSLISRRG 78 (104)
T ss_dssp CCCCEEEEEESCCSSCEEEEEECCS----SCCSEEEEEEEETTCTTCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEET
T ss_pred CCCCCccEEEEecCCeEEEEEcCCC----CccceEEEEEEECcCCCceEEEEcCCCcCEEEeCCCCCCCEEEEEEEEEeC
Confidence 4566678888899999999999875 35999999997654 3334332 2334589999999999999999999999
Q ss_pred CccCCCcccc
Q psy7040 133 EGESEPLETF 142 (716)
Q Consensus 133 ~g~~~~s~~~ 142 (716)
.|.+.++...
T Consensus 79 ~g~s~p~~~~ 88 (104)
T 2rb8_A 79 DMSSNPAKET 88 (104)
T ss_dssp TEECCCEEEE
T ss_pred CccCCCEEEE
Confidence 9988776543
No 303
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.13 E-value=5.4e-10 Score=101.30 Aligned_cols=126 Identities=16% Similarity=0.208 Sum_probs=93.0
Q ss_pred CeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeec-----------------CCCCCcccccccccEEEecCCeE
Q psy7040 382 PKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARA-----------------KKVSPYINRDQLSDIKVRAGSNF 444 (716)
Q Consensus 382 ~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~-----------------~~~~P~~~~~~~~~~~~~~g~~~ 444 (716)
.++.|.++.+.+.+.|+|.|.| |..... ........ ...+|.+.... ...+.+|..+
T Consensus 61 ~~L~I~~v~~~D~G~Y~C~a~N--g~a~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~--~~~v~~g~~v 134 (207)
T 3rbs_A 61 IEMFMEKLQDEDEGTYTFQLQD--GKATNH--STVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYL--SWEVTGECNV 134 (207)
T ss_dssp EEEEESCCCGGGCEEEEEEEEE--TTEEEE--EEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEE--EEEEETTTEE
T ss_pred EEEEECCCChhhCEEEEEEEEC--CCeEEE--EEEEEEccchhhhcccccccccccccCCCCceEecC--CcEEcCCCcE
Confidence 4688999999999999999999 322110 00000000 01245544322 4778899999
Q ss_pred EEEEEEecc-CCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEEEEE
Q psy7040 445 EFDINVIGE-PIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVT 515 (716)
Q Consensus 445 ~~~~~v~~~-p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~ 515 (716)
.|.|.+.+. |.+.+.|++++..+..+.++ ........|.|.++.++|.|.|+|.|.|..|....++.+.
T Consensus 135 ~l~C~v~g~~P~p~i~W~k~g~~l~~~~~~--~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~ 204 (207)
T 3rbs_A 135 LLKCKVANIKKETHIVWYKDEREISVDEKH--DFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLV 204 (207)
T ss_dssp EEEEEEESCCTTCEEEEEETTEEECCCCCC--CCSSEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEEC
T ss_pred EEEEEEeCCCCCCEEEEEECCEECCCCCce--EcCCCEEEEEECCCCcccCEEEEEEEEcCCCEEEEEEEEe
Confidence 999999998 99999999999998765543 2233456799999999999999999999999988877664
No 304
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.13 E-value=8.3e-10 Score=99.78 Aligned_cols=135 Identities=20% Similarity=0.306 Sum_probs=103.2
Q ss_pred CCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccCCCeEEE
Q psy7040 381 TPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEW 460 (716)
Q Consensus 381 ~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W 460 (716)
...+.|.++...+.+.|+|.|.|..|....+.. ..+........|.+. ..+....+..|..+.|.|.+.+.|.+.+.|
T Consensus 61 ~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~-l~V~~~p~~~~~~~~-~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W 138 (197)
T 2j8h_A 61 YHQLIIASVTDDDATVYQVRATNQGGSVSGTAS-LEVEVPAKIHLPKTL-EGMGAVHALRGEVVSIKIPFSGKPDPVITW 138 (197)
T ss_dssp EEEEEECSCCGGGCSEEEEEEEETTEEEEEEEE-EEEEEEEEECCSSCB-TTBEEEEEETTCCCEEEEEEEEESCCEEEE
T ss_pred EEEEEECcCCHHhCEEEEEEEEECCCceeEEEE-EEEcCCCcCCCCccc-cccCeEEEeCCCEEEEEEEEEecCCCcEEE
Confidence 347899999999999999999998765321111 111111111112111 123457788999999999999999999999
Q ss_pred EeCCeEeccCCcEEEEeCCCeEEEEECC-CCCCCceeEEEEEEcCCCceeeEEEEEEE
Q psy7040 461 LCNDITIISKDRFKIVNDDKSTKLKVFD-SKRGDSGIYTLAVKNSWGTDKGTAKVTVL 517 (716)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~l~i~~-l~~~~~~~y~~~a~n~~g~~~~s~~~~v~ 517 (716)
++++..+....++.+........|.|.+ +...|.|.|+|.|.|..|....++.+.|.
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 196 (197)
T 2j8h_A 139 QKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVA 196 (197)
T ss_dssp EESSCEECSSSSCEEEECSSEEEEECTTCCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EECCEEeecCCCEEEEEcCCceEEEEeCCCCcccCEeEEEEEEeCCCcEeEEEEEEEe
Confidence 9999999888888887777788999999 99999999999999999998888777663
No 305
>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.13 E-value=2.5e-10 Score=91.10 Aligned_cols=80 Identities=26% Similarity=0.430 Sum_probs=67.3
Q ss_pred ceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCCcEEEecc-cCCCeEEecCCCCCcEEEEEEEEEecCccCCCc
Q psy7040 61 LEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETGVWIPVGK-TREPEMDVTGLTPGHEYKFRVKALNKEGESEPL 139 (716)
Q Consensus 61 l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~-~~~~~~~i~~L~~~~~y~~~v~a~~~~g~~~~s 139 (716)
+.+...+.+++.|+|++|.. .+..+.+|.|+|+..+...|..... ...++++|.+|.+++.|.|+|+|.|..|.+.++
T Consensus 13 ~~v~~~~~~sv~l~W~~p~~-~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s 91 (107)
T 2dn7_A 13 MMISTTAMNTALLQWHPPKE-LPGELLGYRLQYCRADEARPNTIDFGKDDQHFTVTGLHKGTTYIFRLAAKNRAGLGEEF 91 (107)
T ss_dssp EEEEECSTTEEEEEEECCSS-CSSCCCEEEEEEEETTCSSCEEEEEETTCCEEEEECCCTTCEEEEEEEEEETTEEEEEE
T ss_pred EeEEecCCCEEEEEECCCCC-CCCceeEEEEEEEECCCCCCEEEEeCCCccEEEeCCCCCCCEEEEEEEEEcCCcccCCe
Confidence 57788889999999999874 4445999999999888777766543 335799999999999999999999999999888
Q ss_pred cc
Q psy7040 140 ET 141 (716)
Q Consensus 140 ~~ 141 (716)
..
T Consensus 92 ~~ 93 (107)
T 2dn7_A 92 EK 93 (107)
T ss_dssp EE
T ss_pred ee
Confidence 74
No 306
>4doh_R Interleukin-20 receptor subunit alpha; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}
Probab=99.13 E-value=4.2e-09 Score=95.72 Aligned_cols=180 Identities=18% Similarity=0.201 Sum_probs=119.7
Q ss_pred CCCCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCCcEEEec---ccCCCeEEecCCC--CCcEEEEEEE
Q psy7040 54 GLDPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETGVWIPVG---KTREPEMDVTGLT--PGHEYKFRVK 128 (716)
Q Consensus 54 ~~~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~---~~~~~~~~i~~L~--~~~~y~~~v~ 128 (716)
.+++|.++++....-.. .|+|+++...+ .....|.|+|..-+...|.... ....+.+.|+++. +...|.+||+
T Consensus 8 ~lp~P~nv~~~s~n~~~-iL~W~p~~~~~-~~~~~Y~Vqy~~~~~~~W~~~~~C~~~~~~~Cdlt~~~~~~~~~Y~~RV~ 85 (221)
T 4doh_R 8 GLPKPANITFLSINMKN-VLQWTPPEGLQ-GVKVTYTVQYFIYGQKKWLNKSECRNINRTYCDLSAETSDYEHQYYARVR 85 (221)
T ss_dssp ---CCEEEEEEEETTEE-EEEEECCCCSS-CCCCEEEEEEEETTSCCCEECGGGSSBSSSEEECTTTTCCSSCCEEEEEE
T ss_pred CCCCCceeEEEEECCcE-EEEEcCCCCCC-CCCeEEEEEEEECCCCCceecccccCCCCCEEeCCCccccCCCCEEEEEE
Confidence 35667778887766655 59999875322 3477899999987777897643 3446889999975 5668999999
Q ss_pred EEecCccCCCccccceEEecCCCCcccccccccceecccCCCCCCceEEEEecCCccEEEEeccccCcceEEEEEEEeCC
Q psy7040 129 ALNKEGESEPLETFSSIIARDPYSKYTSVSSLDSHKRSNQPCGSGMVRKVQHLDYNTKLGVRMAQRADAGFYTVTAENIN 208 (716)
Q Consensus 129 a~~~~g~~~~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~G~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~ 208 (716)
|.++.+.|.++....+....
T Consensus 86 A~~g~~~S~w~~~~~F~p~~------------------------------------------------------------ 105 (221)
T 4doh_R 86 AIWGTKCSKWAESGRFYPFL------------------------------------------------------------ 105 (221)
T ss_dssp EESSSCBCCCEECCCBCHHH------------------------------------------------------------
T ss_pred EEcCCcccCCEecCceechh------------------------------------------------------------
Confidence 99987777665432211100
Q ss_pred CCceeEEEEEEecCCCCCCCCeEEeEEeCCeEEEEEECCCCC----CCC--------ccceEEEEEEeCCCCCeEEcccc
Q psy7040 209 GKDSVEVEVIVLDKPSPPGGPLKVSNVHAEGVTLDWKVPDDD----GGQ--------PIEKYVVDKMDEATGRWTPAGET 276 (716)
Q Consensus 209 g~~~~~~~~~v~~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~----~~~--------~~~~y~v~~~~~~~~~~~~~~~~ 276 (716)
.+...||. +.+. ..++++.|.|.+|... +|. +...|.|.+...+....... .
T Consensus 106 -----------~t~igPP~--v~v~-~~~~~l~V~~~~P~~~~~~~~~~~~s~~~i~~~l~Y~V~y~~~~~~~~~~~-~- 169 (221)
T 4doh_R 106 -----------ETQIGPPE--VALT-TDEKSISVVLTAPEKWKRNPEDLPVSMQQIYSNLKYNVSVLNTKSNRTWSQ-C- 169 (221)
T ss_dssp -----------HCBCCCCE--EEEE-CCSSCEEEEEECCBCCCSSTTSCCCBHHHHSTTCEEEEEEEETTTTEEEEE-E-
T ss_pred -----------hCccCCCE--EEEE-ECCCEEEEEEeCCCcccccCCCCceEHHHhcCceEEEEEEEECCCCcEEEE-e-
Confidence 12345554 5665 4678999999987642 221 13489998877654432111 1
Q ss_pred CcccceEEEcCCCCCCeEEEEEEEEcC--CCCCCCCcc
Q psy7040 277 EGPVTGLEVEGLIPNHKYKFRVRAVNK--QGKSEPLTT 312 (716)
Q Consensus 277 ~~~~~~~~i~~L~p~~~y~~~v~a~n~--~g~~~~~~~ 312 (716)
.....+.|.+|.|++.|.++|+|... .|.+..+..
T Consensus 170 -~~~~~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~ 206 (221)
T 4doh_R 170 -VTNHTLVLTWLEPNTLYCVHVESFVPGPPRRAQPSEK 206 (221)
T ss_dssp -ECSSEEEECSCCTTCEEEEEEEEECSSSCCCCCCCEE
T ss_pred -ecCcEEEEecCCCCCcEEEEEEEEEcCCCCCCCCCCC
Confidence 23468999999999999999999864 455555444
No 307
>1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A
Probab=99.12 E-value=5.1e-10 Score=103.14 Aligned_cols=169 Identities=16% Similarity=0.092 Sum_probs=110.0
Q ss_pred CCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCCcEEEecc--------cCCCeEE--ecCCCCCcEEEEE
Q psy7040 57 PEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETGVWIPVGK--------TREPEMD--VTGLTPGHEYKFR 126 (716)
Q Consensus 57 p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~--------~~~~~~~--i~~L~~~~~y~~~ 126 (716)
.|.+|.........+.++|+++.. ++....+|.|.|+..+. .|..|.. .....+. +.++...+.|.|+
T Consensus 23 ~P~nl~C~~~~~~~l~C~W~~~~~-~~~~~~~y~l~y~~~~~-~~~~C~~~~~~~~~~~~~~~C~~~~~~~~~~~~y~~~ 100 (227)
T 1eer_B 23 GPEELLCFTERLEDLVCFWEEAAS-AGVGPGQYSFSYQLEDE-PWKLCRLHQAPTARGAVRFWCSLPTADTSSFVPLELR 100 (227)
T ss_dssp STTSCEEEBSSSSCCEEEEEESCC-SSCCTTSEEEEEEETTS-CCEEECEEEEEETTTEEEEEEECCGGGCCBSSCEEEE
T ss_pred CCcCCeEECCCCCEEEEEecCCCC-CCCCCccEEEEEEcCCC-CceeccceeccCCCCCceEEEEeCCCcceeeEEEEEE
Confidence 355666666677899999998774 33346789999986533 3544421 1112333 3567778889999
Q ss_pred EEEEecCccCCCccccceEEecCCCCcccccccccceecccCCCCCCceEEEEecCCccEEEEeccccCcceEEEEEEEe
Q psy7040 127 VKALNKEGESEPLETFSSIIARDPYSKYTSVSSLDSHKRSNQPCGSGMVRKVQHLDYNTKLGVRMAQRADAGFYTVTAEN 206 (716)
Q Consensus 127 v~a~~~~g~~~~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~G~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n 206 (716)
|.|.+..+.. ...+...
T Consensus 101 V~a~~~~~~~-----~~~~~~~---------------------------------------------------------- 117 (227)
T 1eer_B 101 VTAASGAPRY-----HRVIHIN---------------------------------------------------------- 117 (227)
T ss_dssp EEETTSCEEE-----EEEECGG----------------------------------------------------------
T ss_pred EEecCCCccE-----EEEEEee----------------------------------------------------------
Confidence 9985422200 0000000
Q ss_pred CCCCceeEEEEEEecCCCCCCCCeEEeEEe-CCeEEEEEECCCCCCCCccceEEEEEEeCCCCCeEEccccCcccceEEE
Q psy7040 207 INGKDSVEVEVIVLDKPSPPGGPLKVSNVH-AEGVTLDWKVPDDDGGQPIEKYVVDKMDEATGRWTPAGETEGPVTGLEV 285 (716)
Q Consensus 207 ~~g~~~~~~~~~v~~~p~~p~~~~~~~~~~-~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i 285 (716)
-..+|.+|.+ +.+.... ..++.|+|.+|.......+..|.|.++......|............+.|
T Consensus 118 ------------~~v~p~pP~~-l~~~~~~~~~~l~v~W~~P~~~~~~~~l~Yev~y~~~~~~~w~~~~~~~~~~~~~~l 184 (227)
T 1eer_B 118 ------------EVVLLDAPVG-LVARLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGQGAGSVQRVEILEGRTECVL 184 (227)
T ss_dssp ------------GSEECCCCEE-EEEEECSSTTCEEEEEECCSSCSCGGGEEEEEEEECCSSSCCCCEEEECTTCCEEEE
T ss_pred ------------eeEccCcCcc-eEEEEcCCCCeEEEEEcCCCCcccccceEEEEEEEcCCCCCcEEEEEEecCceEEEE
Confidence 0025788887 7777654 7899999998764322236799999987766656542122244678999
Q ss_pred cCCCCCCeEEEEEEEEcC
Q psy7040 286 EGLIPNHKYKFRVRAVNK 303 (716)
Q Consensus 286 ~~L~p~~~y~~~v~a~n~ 303 (716)
.+|.|++.|.++|+|...
T Consensus 185 ~~L~p~t~Y~vqVRa~~~ 202 (227)
T 1eer_B 185 SNLRGRTRYTFAVRARMA 202 (227)
T ss_dssp CCCCSSCEEEEEEEEEEC
T ss_pred cccCCCCeEEEEEEEeEC
Confidence 999999999999999964
No 308
>3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A
Probab=99.12 E-value=4.1e-10 Score=88.18 Aligned_cols=79 Identities=16% Similarity=0.267 Sum_probs=64.2
Q ss_pred CCCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCC-cEEEec-ccCCCeEEecCCCCCcEEEEEEEEEec
Q psy7040 55 LDPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETG-VWIPVG-KTREPEMDVTGLTPGHEYKFRVKALNK 132 (716)
Q Consensus 55 ~~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~-~~~~~~-~~~~~~~~i~~L~~~~~y~~~v~a~~~ 132 (716)
+.||..|++.+++.+++.|+|++|.. +..+.+|+|+|...++. .+.... ....++++|.+|.|++.|.|+|+|.+.
T Consensus 5 ~~~P~~l~v~~~t~~Sv~l~W~~p~~--~~~i~~Y~v~y~~~~~~~~~~~~~v~~~~t~~~l~~L~p~t~Y~~~V~A~~~ 82 (101)
T 3k2m_C 5 SSVPTKLEVVAATPTSLLISWDAPMS--SSSVYYYRITYGETGGNSPVQEFTVPYSSSTATISGLSPGVDYTITVYAWGE 82 (101)
T ss_dssp EBSSCEEEEEEEETTEEEEEECCCCT--TSCCCEEEEEEEETTCSSCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEEE
T ss_pred CCCCcceEEeecCCCEEEEEecCCCC--CCceeeEEEEEEECCCCCccEEEEcCCCccEEEECCCCCCCEEEEEEEEEeC
Confidence 46788899999999999999999862 34599999999876543 333222 234589999999999999999999999
Q ss_pred Ccc
Q psy7040 133 EGE 135 (716)
Q Consensus 133 ~g~ 135 (716)
.|.
T Consensus 83 ~~~ 85 (101)
T 3k2m_C 83 DSA 85 (101)
T ss_dssp CTT
T ss_pred Ccc
Confidence 887
No 309
>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.12 E-value=2.1e-10 Score=91.62 Aligned_cols=93 Identities=24% Similarity=0.264 Sum_probs=71.9
Q ss_pred CCCCCCC-CcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEE
Q psy7040 323 NQPGKPG-TPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLA 401 (716)
Q Consensus 323 ~~p~~p~-~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a 401 (716)
.+|.+|. ++.....+.+++.|+|.+|..++ ++|.+|.|+++......|.... .....+++|.+|.+++.|.|+|+|
T Consensus 8 ~~P~~P~~~~~~~~~~~~sv~l~W~~p~~~~-~~i~~Y~v~~~~~~~~~~~~~~--~~~~~~~~v~~L~p~t~Y~frV~A 84 (110)
T 2db8_A 8 PVPATPILQLEECCTHNNSATLSWKQPPLST-VPADGYILELDDGNGGQFREVY--VGKETMCTVDGLHFNSTYNARVKA 84 (110)
T ss_dssp CCCCCCBCCCCCCSCSSSEEEECCBCCTTCC-SCCSEEEEEECCSSSSCCEEEE--EESCSCEEEECCCSSSCCEEEEEE
T ss_pred CCCCCccccceeeccCCCEEEEEECCCCCCC-CCccEEEEEEEeCCCCceEEEE--eCCcCEEEECCCCCCCEEEEEEEE
Confidence 3454443 44444557899999999987654 6899999999887666776554 236788999999999999999999
Q ss_pred EeCCCCCCCCCCCCceE
Q psy7040 402 VNKGGPGEPSDPTAPHI 418 (716)
Q Consensus 402 ~n~~g~~~~s~~~~~~~ 418 (716)
.|..|.|.+|......+
T Consensus 85 ~n~~G~s~~S~~~~~~T 101 (110)
T 2db8_A 85 FNKTGVSPYSKTLVLQT 101 (110)
T ss_dssp ECSSCBCCCCSCEECCC
T ss_pred EeCCcCCCCCCCEEEEc
Confidence 99999999887654433
No 310
>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.12 E-value=8.6e-10 Score=87.36 Aligned_cols=91 Identities=18% Similarity=0.189 Sum_probs=71.3
Q ss_pred CCCCCCCCCCcEEEeeeCCeEEEEe--cCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEE
Q psy7040 321 PFNQPGKPGTPEIKDFDTDFVELAW--TPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFR 398 (716)
Q Consensus 321 ~~~~p~~p~~~~~~~~~~~~i~l~W--~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~ 398 (716)
...+|.+|.++++...+.++|.|+| .+|...+| . .+|.|+|+... .. ..... ....+.|.+|.|++.|.|+
T Consensus 6 ~~~~P~~p~~l~~~~~~~~sv~l~W~~~~P~~~ng-~-~~Y~v~y~~~~-~~-~~~~~---~~~~~~i~~L~p~t~Y~f~ 78 (107)
T 1x5a_A 6 SGAESLSGLSLKLVKKEPRQLELTWAGSRPRNPGG-N-LSYELHVLNQD-EE-WHQMV---LEPRVLLTKLQPDTTYIVR 78 (107)
T ss_dssp TTCCCCCSCCCCEEEEETTEEEEECCCCCSSCCSS-C-CEEEEEEECSS-CE-EEEEE---SSSEEEEESCCSSCEEEEE
T ss_pred CCCCCCCCCceEEEecCCCEEEEEECCCCCCCCCC-c-eEEEEEEEeCC-CC-ceEEE---ecceEEECCCCCCCEEEEE
Confidence 4467889999999999999999999 88876655 4 89999998752 11 11111 1233999999999999999
Q ss_pred EEEEeCCCCCCCCCCCCceE
Q psy7040 399 VLAVNKGGPGEPSDPTAPHI 418 (716)
Q Consensus 399 v~a~n~~g~~~~s~~~~~~~ 418 (716)
|+|.|..|.|.+|....+.+
T Consensus 79 V~A~~~~G~g~~S~~~~~~T 98 (107)
T 1x5a_A 79 VRTLTPLGPGPFSPDHEFRT 98 (107)
T ss_dssp EEEECSSSCCCCCCCEEEEC
T ss_pred EEEECCCccCCCCCCEEEEE
Confidence 99999999999888655444
No 311
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.12 E-value=5.3e-09 Score=99.37 Aligned_cols=196 Identities=12% Similarity=0.075 Sum_probs=127.7
Q ss_pred CCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEE-eccCCCeE
Q psy7040 380 DTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINV-IGEPIPTK 458 (716)
Q Consensus 380 ~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v-~~~p~~~~ 458 (716)
....+.|.++...+...|+|.|.|..+.. . ....+.. +|.+ .......+.+|+.+.|.|.+ .+.|.+.+
T Consensus 46 ~~~~l~i~~~~~~d~G~Y~C~~~~~~~s~----~-~~l~v~~---~~~~--~~~~~~~~~~g~~v~l~C~~~~~~p~~~v 115 (262)
T 3rjd_A 46 STPSYRITSASVNDSGEYRCQRGLSGRSD----P-IQLEIHR---GWLL--LQVSSRVFTEGEPLALRCHAWKDKLVYNV 115 (262)
T ss_dssp CSSEEEESSCCGGGCEEEEEEESSSCCCC----C-EEEEEEC---SSEE--EEESCSEEETTSCEEEEEEEGGGCCCEEE
T ss_pred cCCeEEEecCCcccCeEEEEEEecCCccc----c-EEEEEec---cceE--ecCCCeEEecCCeEEEEEEccCCCCCceE
Confidence 46779999999999999999998754421 1 1122211 2221 11234567899999999999 78888899
Q ss_pred EEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEEEEEEE----EEEEEEeCC--CCCCCC
Q psy7040 459 EWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVL----GCSLKWNPP--EDDGGA 532 (716)
Q Consensus 459 ~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v~----~v~l~W~~p--~~~~~~ 532 (716)
.|++++..+... .....|.|.++...|.|.|+|.|.|..+..+....+.+. ...+.-.+. ...+..
T Consensus 116 ~W~~~g~~~~~~--------~~~~~l~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~p~~~~~~~~~~~~g~~ 187 (262)
T 3rjd_A 116 LYYRNGKAFKFF--------HWNSNLTILKTNISHNGTYHCSGMGKHRYTSAGISVTVKELFPAPVLNASVTSPLLEGNL 187 (262)
T ss_dssp EEEETTEEEEEE--------EECCCEEESSCCGGGCEEEEEEEESSSEEEEECEEEEEECSSCCCEEEESSCSSEETTCC
T ss_pred EEEECCcccccc--------CCCCeEEEEECChhhCEEEEEEEeCCCCccccceEEEeccCCCCCeEeecCceeecCCCe
Confidence 999998876321 123479999999999999999999999777776666665 122222221 111222
Q ss_pred ceeeEEEEEEec-CCCceeeeEEEccceeeeeccccceeEEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy7040 533 PIEYYMVEKMET-DTGKVLIKWIRTNDKRVTIDNVDYFTKITIRPLQRSDTAQYTVTATNSQGKD 596 (716)
Q Consensus 533 ~i~~y~v~~~~~-~~~~~~~~w~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~G~~ 596 (716)
....|.+...+. ........|++.+...... .....+.|.++...+.+.|+|.|.|..|..
T Consensus 188 ~~l~C~~~~~p~~p~~~~~~~w~~~~~~~~~~---~~~~~L~i~~v~~~d~G~Y~C~a~n~~G~~ 249 (262)
T 3rjd_A 188 VTLSCETKLLLQRPGLQLYFSFYMGSKTLRGR---NTSSEYQILTARREDSGLYWCEAATEDGNV 249 (262)
T ss_dssp EEEEEECCCCCC-----EEEEEEETTEEEEEE---ESCCEEEESSCCGGGCEEEEEEEEETTSSC
T ss_pred EEEEeEcccCCCCCCccEEEEEEeCCcEeccc---CCCceEEEEEechhhCeEEEEEEEcccCce
Confidence 222333222111 1111225777777655422 223679999999999999999999999853
No 312
>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.12 E-value=2.6e-10 Score=91.72 Aligned_cols=91 Identities=18% Similarity=0.351 Sum_probs=70.3
Q ss_pred CCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCC--cEEEecccCCCeEEecCCCCCcEEEEEEEEEecCc
Q psy7040 57 PEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETG--VWIPVGKTREPEMDVTGLTPGHEYKFRVKALNKEG 134 (716)
Q Consensus 57 p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~--~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~~~~g 134 (716)
+|..+.+...+.+++.|+|++|... +..|.+|+|+|+..+.. .+... ....+.+.|.+|.+++.|.|+|+|.|..|
T Consensus 13 ~P~~l~~~~~~~~sv~l~W~~p~~~-~g~i~~Y~v~~~~~~~~~~~~~~~-~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G 90 (111)
T 1x5l_A 13 QVVVIRQERAGQTSVSLLWQEPEQP-NGIILEYEIKYYEKDKEMQSYSTL-KAVTTRATVSGLKPGTRYVFQVRARTSAG 90 (111)
T ss_dssp CCCCEECSCBCSSCEEEEECCCSCC-CSCCCEEEEEEEESSSCCSSCEEE-EESSSEEEECSCCTTCEEEECEEEEETTE
T ss_pred CCceEEEEEcCCCEEEEEECCCCCC-CCEEEEEEEEEEECCCCceeEEEe-cCCCCEEEEcCCCCCCEEEEEEEEEeCCc
Confidence 3445666688899999999999754 44599999999876532 23222 33458999999999999999999999999
Q ss_pred cCCCccccceEEecC
Q psy7040 135 ESEPLETFSSIIARD 149 (716)
Q Consensus 135 ~~~~s~~~~~~~~~~ 149 (716)
.+.+|......+...
T Consensus 91 ~g~~S~~~~~~T~~~ 105 (111)
T 1x5l_A 91 CGRFSQAMEVETGKP 105 (111)
T ss_dssp ECCCCCCEEEECCCT
T ss_pred CCCCcccEEEEcCCC
Confidence 999887776666543
No 313
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.12 E-value=2.9e-10 Score=101.33 Aligned_cols=58 Identities=12% Similarity=-0.044 Sum_probs=47.0
Q ss_pred EEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCC
Q psy7040 437 KVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSW 505 (716)
Q Consensus 437 ~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~ 505 (716)
.+.+|+.+.|.|.+.+ +.+.+.|++++... ......|.|.++.+.|.|.|+|.|.|..
T Consensus 18 ~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~~----------~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 75 (184)
T 2gi7_A 18 LVPLEKPVTLRCQGPP-GVDLYRLEKLSSSR----------YQDQAVLFIPAMKRSLAGRYRCSYQNGS 75 (184)
T ss_dssp EEETTCCEEEEEECST-TCSEEEEEETTTCC----------EESSSEEEESSCCGGGCEEEEEEEEETT
T ss_pred cccCCCcEEEEEeCCC-CCCEEEEEECCccc----------cCcccEEEECcCChhhCceEEEEEEcCC
Confidence 6889999999999987 77899999987641 1124478899999999999999887654
No 314
>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.12 E-value=4.3e-10 Score=91.61 Aligned_cols=89 Identities=27% Similarity=0.445 Sum_probs=75.5
Q ss_pred cCCCCCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCCCCCeEEccccCcccceEEEcCCCCCCeEEEEEEE
Q psy7040 221 DKPSPPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEATGRWTPAGETEGPVTGLEVEGLIPNHKYKFRVRA 300 (716)
Q Consensus 221 ~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a 300 (716)
+.|.+|.+ +.+.....+++.|+|++|..+ | ++.+|.|+++......|..+.........+.|.+|.|++.|.|+|+|
T Consensus 16 ~~P~~P~~-l~~~~~~~~sv~l~W~~p~~~-g-~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A 92 (118)
T 2yrz_A 16 GVPDTPTR-LVFSALGPTSLRVSWQEPRCE-R-PLQGYSVEYQLLNGGELHRLNIPNPAQTSVVVEDLLPNHSYVFRVRA 92 (118)
T ss_dssp SCCCCCCC-CEECCCBTTEEEEECCCCCCS-S-CEEEEEEEEEBSSSCCEEEEEESCTTCCEEEEESCCTTCEEEEEEEE
T ss_pred CCCCCCCc-eEEEeCCCCEEEEEeCCCCCC-C-CccEEEEEEEECCCCceEEEEcCCCCcCEEEeCCCCCCCEEEEEEEE
Confidence 56788887 788888999999999988765 4 79999999998777777766554456789999999999999999999
Q ss_pred EcCCCCCCCCcc
Q psy7040 301 VNKQGKSEPLTT 312 (716)
Q Consensus 301 ~n~~g~~~~~~~ 312 (716)
.|..|.+.++..
T Consensus 93 ~n~~G~g~~S~~ 104 (118)
T 2yrz_A 93 QSQEGWGREREG 104 (118)
T ss_dssp EESSCEEEEEEE
T ss_pred EcCCcCCCCcCC
Confidence 999998877654
No 315
>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.12 E-value=3e-10 Score=93.31 Aligned_cols=88 Identities=18% Similarity=0.279 Sum_probs=66.9
Q ss_pred CCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCCcEEEecccCCCeEEecCCCCCcEEEEEEEEEecCcc
Q psy7040 56 DPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETGVWIPVGKTREPEMDVTGLTPGHEYKFRVKALNKEGE 135 (716)
Q Consensus 56 ~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~~~~g~ 135 (716)
.||..|++...+ +++.|+|++|...+ ..|.+|.|+|+...............++++|.+|.|++.|.|+|+|.|..|.
T Consensus 29 ~~P~~l~~~~~~-~sv~l~W~~P~~~~-g~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~ 106 (126)
T 1x5i_A 29 EVPSSLHVRPLV-TSIVVSWTPPENQN-IVVRGYAIGYGIGSPHAQTIKVDYKQRYYTIENLDPSSHYVITLKAFNNVGE 106 (126)
T ss_dssp CSCSEEEEEEET-TEEEEEEECCSCTT-BCCCEEEEEECSSCGGGEEEECCTTCCEEEECSCCSSCEECCEEEEECSSCB
T ss_pred CCCCeeEEEecC-CEEEEEEcCCCCCC-CCEeEEEEEEEcCCCCceEEEeCCCeeEEEEeCCCCCCEEEEEEEEEeCCcc
Confidence 345557777886 99999999997544 4599999999853322223333344589999999999999999999999999
Q ss_pred CCCccccceE
Q psy7040 136 SEPLETFSSI 145 (716)
Q Consensus 136 ~~~s~~~~~~ 145 (716)
+.++.....+
T Consensus 107 g~~s~~~~~T 116 (126)
T 1x5i_A 107 GIPLYESAVT 116 (126)
T ss_dssp CCCCCCCEEC
T ss_pred CcceeeEEec
Confidence 9888654433
No 316
>2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.11 E-value=2.2e-10 Score=94.25 Aligned_cols=89 Identities=22% Similarity=0.353 Sum_probs=67.3
Q ss_pred CCCCC-CceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcC-----------CCCcEEEecccCCCeEEecCCCCCcE
Q psy7040 55 LDPEG-PLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDP-----------ETGVWIPVGKTREPEMDVTGLTPGHE 122 (716)
Q Consensus 55 ~~p~~-~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~-----------~~~~~~~~~~~~~~~~~i~~L~~~~~ 122 (716)
+.||. .+.+..++.+++.|+|++|..+ + +..|.++|+.. ....|..+.....++++|.+|.|++.
T Consensus 16 P~~P~~~~~~~~~~~~sv~L~W~~p~~~-g--~~~Y~~~Y~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~v~gL~p~t~ 92 (127)
T 2dmk_A 16 PNPPSIREELCTASHDTITVHWISDDEF-S--ISSYELQYTIFTGQANFISLYNSVDSWMIVPNIKQNHYTVHGLQSGTR 92 (127)
T ss_dssp CCCCEEEEEEEEEETTEEEEEEECSCCS-S--EEEEEEEEEEESCCSCHHHHHHTGGGSEEEEEECSSEEEEESCCSSCE
T ss_pred CcCCCCCCEEEeeeCCEEEEEECCCCCC-C--ccceEEEEEEecccccccccccCCCCcEEeecccCCeEEECCCCCCCE
Confidence 34444 5678899999999999998743 2 78899988741 12467766555568999999999999
Q ss_pred EEEEEEEEecCccCCCccccceEEe
Q psy7040 123 YKFRVKALNKEGESEPLETFSSIIA 147 (716)
Q Consensus 123 y~~~v~a~~~~g~~~~s~~~~~~~~ 147 (716)
|.|||+|+|..|.+ ++......+.
T Consensus 93 Y~frV~A~N~~G~~-~S~~v~~~T~ 116 (127)
T 2dmk_A 93 YIFIVKAINQAGSR-NSEPTRLKTN 116 (127)
T ss_dssp EEEEEEEEESSCEE-ECCCEEEECC
T ss_pred EEEEEEEEeCCCCC-CCcCeEeEeC
Confidence 99999999999984 4444444443
No 317
>2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.10 E-value=6.5e-10 Score=87.67 Aligned_cols=85 Identities=25% Similarity=0.360 Sum_probs=66.3
Q ss_pred CCCCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCCc---EEEecccCCCeEEecCCCCCcEEEEEEEEE
Q psy7040 54 GLDPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETGV---WIPVGKTREPEMDVTGLTPGHEYKFRVKAL 130 (716)
Q Consensus 54 ~~~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~~---~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~ 130 (716)
++.||..|++..++.+++.|+|++|. + +.+|+|+|+..+... +...... ..+++|.+|+|++.|.|+|+|.
T Consensus 8 ~~~~P~~l~~~~~~~~sv~lsW~~p~---~--~~~Y~v~y~~~~~~~~~~~~~~~~~-~~~~~l~~L~p~t~Y~~~V~A~ 81 (104)
T 2dkm_A 8 PLPPPRALTLAAVTPRTVHLTWQPSA---G--ATHYLVRCSPASPKGEEEEREVQVG-RPEVLLDGLEPGRDYEVSVQSL 81 (104)
T ss_dssp SCCCCCCCEEEEECSSEEEEECCCCS---S--CSEEEEEEEESSSCCSSCCEEEEES-SSEEEEESCCTTCCEEEEEEEE
T ss_pred CCCCCceeEEEecCCCEEEEEEeCCC---C--CCeEEEEEEECCCCCCcceEEEecC-CCEEEECCCCCCCEEEEEEEEE
Confidence 45678889999999999999999875 1 489999998765532 2222222 2499999999999999999999
Q ss_pred ecCccCCCccccce
Q psy7040 131 NKEGESEPLETFSS 144 (716)
Q Consensus 131 ~~~g~~~~s~~~~~ 144 (716)
|..|.+.+......
T Consensus 82 ~~~~~s~p~~~~~~ 95 (104)
T 2dkm_A 82 RGPEGSEARGIRAR 95 (104)
T ss_dssp CSSSBCCCEEEECC
T ss_pred CCCCCCCCEEEEEE
Confidence 99888877654433
No 318
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.10 E-value=9.6e-09 Score=101.25 Aligned_cols=214 Identities=13% Similarity=0.105 Sum_probs=125.5
Q ss_pred CCCCeEEecCCCCCCeEEEEEEEEeCCCCCCC--CCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccCCC
Q psy7040 379 GDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEP--SDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIP 456 (716)
Q Consensus 379 ~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~--s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~ 456 (716)
.....+.|.++...+...|+|.|.|..|.... ........+...+.+|.+.. ....+..|..+.|.|.+.+.|++
T Consensus 71 ~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~~---~~~~~~~g~~~~l~C~~~g~p~~ 147 (327)
T 2wng_A 71 NMDFSISISNITPADAGTYYCVKFRKGSPDTEFKSGAGTELSVRAKPSAPVVSG---PAARATPQHTVSFTCESHGFSPR 147 (327)
T ss_dssp CCBCCEEECSCCGGGCEEEEEEEEESSTTCEEEEECCCEEEEEEBCCCCCEEEC---CSSCBCTTCEEEEEEEEEEEBSS
T ss_pred CceeEEEEccCccccCeEEEEEeecCCCcceeEeecCcEEEEEEecCCCceeec---cccccCCCCEEEEEEEEeCccCC
Confidence 34567999999999999999999997653110 00112233333444555431 13457889999999999988876
Q ss_pred --eEEEEeCCeEeccCCcEEEEeCC-C----eEEEEECCCCCCCceeEEEEEEcCCCce-ee--EEEEEE--E---EEEE
Q psy7040 457 --TKEWLCNDITIISKDRFKIVNDD-K----STKLKVFDSKRGDSGIYTLAVKNSWGTD-KG--TAKVTV--L---GCSL 521 (716)
Q Consensus 457 --~~~W~~~~~~~~~~~~~~~~~~~-~----~~~l~i~~l~~~~~~~y~~~a~n~~g~~-~~--s~~~~v--~---~v~l 521 (716)
.+.|++++..+............ . ...|.|.....++.|.|+|.|.|..|.. .. +..+.+ . .+.+
T Consensus 148 ~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~v~~~P~i~~ 227 (327)
T 2wng_A 148 DITLKWFKNGNELSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEV 227 (327)
T ss_dssp CCEEEEEETTEECCCEEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEEGGGTBCBCCEEEE
T ss_pred CcEEEEEECCEEccccccccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccCCCcccceEEeccccCCCCEEEE
Confidence 89999999887643322111111 0 2256777777777899999999988763 22 222211 1 3333
Q ss_pred EEeCCCCCCCCceeeEEEEEEecCCCceeeeEEEccceeeeec------cccc----eeEEEEcCCCCCCeEEEEEEEEc
Q psy7040 522 KWNPPEDDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTID------NVDY----FTKITIRPLQRSDTAQYTVTATN 591 (716)
Q Consensus 522 ~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~------~~~~----~~~~~i~~L~~~~~y~~~v~a~n 591 (716)
.-.. ...+......|.+...... ...+.|++.+....... ..+. ...+.|......+.+.|+|.|.|
T Consensus 228 ~~~~-~~~G~~v~l~C~~~g~~p~--~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~N 304 (327)
T 2wng_A 228 TQQP-VRAENQVNVTCQVRKFYPQ--RLQLTWLENGNVSRTETASTVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEH 304 (327)
T ss_dssp EEEC-CSSTTCCEEEEEEEEEBSS--CEEEEEEETTEEEEEEECCSCEECTTSCEEEEEEEEC-------CCEEEEEEEE
T ss_pred ecCC-cCCCCcEEEEEEEccccCC--CcEEEEEECCeEccCcccCceEECCCCcEEEEEEEEEccccccCCCEEEEEEEe
Confidence 3222 2333444555655542211 11499999877654321 0111 13466777888899999999999
Q ss_pred CCCCCcc
Q psy7040 592 SQGKDQV 598 (716)
Q Consensus 592 ~~G~~~~ 598 (716)
.+|....
T Consensus 305 ~~~~~~s 311 (327)
T 2wng_A 305 DGQPAVS 311 (327)
T ss_dssp TTCCCEE
T ss_pred CCCCCch
Confidence 9986433
No 319
>3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens}
Probab=99.10 E-value=5.6e-09 Score=94.34 Aligned_cols=170 Identities=11% Similarity=0.051 Sum_probs=104.0
Q ss_pred CCeEEEEecCCCCCCCCccc-eEEEEEEcCCC-----------CcEEEecc--cCCCeEEecCCCCCcEEEEEEEEEecC
Q psy7040 68 KDGCTLKWNKPKDDGGEPLE-GYLVEKYDPET-----------GVWIPVGK--TREPEMDVTGLTPGHEYKFRVKALNKE 133 (716)
Q Consensus 68 ~~s~~l~W~~p~~~~~~~i~-~y~v~~~~~~~-----------~~~~~~~~--~~~~~~~i~~L~~~~~y~~~v~a~~~~ 133 (716)
-..+..+|++... .+. .. .|.+.|...+. +....|.. .....+.+..+...+.|.|+|.|.|..
T Consensus 15 ~~~~~C~W~~g~~-~~l-~t~~~~l~~~~~~~~c~~~~~~~~~~~~~~C~~~~~~~~~C~~~~~~~~~~Y~~~V~a~N~~ 92 (206)
T 3v6o_A 15 LTKMTCRWSTSTI-QSL-AESTLQLRYHRSSLYCSDIPSIHPISEPKDCYLQSDGFYECIFQPIFLLSGYTMWIRINHSL 92 (206)
T ss_dssp SSCEEEEECCCC----------EEEEEEECSSCCCSSCCCCSSCEEECEEECTTSCEEEEECSCCTTSCEEEEEEEC---
T ss_pred CcEEEEEecCCCc-CCc-ccccEEEEEEEcCcCccccccccccCcCCCCCCCCCCCceEEeCcHHhcccEEEEEEEEcCC
Confidence 4689999997552 222 23 68887764321 11233322 122478888888889999999999988
Q ss_pred ccCCCccccceEEecCCCCcccccccccceecccCCCCCCceEEEEecCCccEEEEeccccCcceEEEEEEEeCCCCcee
Q psy7040 134 GESEPLETFSSIIARDPYSKYTSVSSLDSHKRSNQPCGSGMVRKVQHLDYNTKLGVRMAQRADAGFYTVTAENINGKDSV 213 (716)
Q Consensus 134 g~~~~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~G~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~ 213 (716)
|...+... .+...
T Consensus 93 G~~~s~~~--~~~~~----------------------------------------------------------------- 105 (206)
T 3v6o_A 93 GSLDSPPT--CVLPD----------------------------------------------------------------- 105 (206)
T ss_dssp CCEECCCE--EECGG-----------------------------------------------------------------
T ss_pred ccccCCcc--cEeec-----------------------------------------------------------------
Confidence 75432211 11000
Q ss_pred EEEEEEecCCCCCCCCeEEeEE-eCCeEEEEEECCCCCCCCccceEEEEEEeCC-CCCeEEccccCcccceEEEcCCCCC
Q psy7040 214 EVEVIVLDKPSPPGGPLKVSNV-HAEGVTLDWKVPDDDGGQPIEKYVVDKMDEA-TGRWTPAGETEGPVTGLEVEGLIPN 291 (716)
Q Consensus 214 ~~~~~v~~~p~~p~~~~~~~~~-~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~-~~~~~~~~~~~~~~~~~~i~~L~p~ 291 (716)
-..+|.||.+ +.+... ...++.|+|.+|.... ....|.|+++..+ ...|............+.+.+|.|+
T Consensus 106 -----~~vkp~pP~~-l~v~~~~~~~~l~l~W~~P~~~~--~~l~yev~y~~~~~~~~w~~~~~~~~~~~~~~l~~L~p~ 177 (206)
T 3v6o_A 106 -----SVVKPLPPSS-VKAEITINIGLLKISWEKPVFPE--NNLQFQIRYGLSGKEVQWKMYEVYDAKSKSVSLPVPDLC 177 (206)
T ss_dssp -----GGBCCCCCCS-CEEEEETTTTEEEEEC----------CEEEEEEEEESSSSCCCEEEEECC---CEEEECCSCTT
T ss_pred -----ceEcCCCCCc-eEeEEecCCCeEEEEECCCCCCC--CcEEEEEEEEECCCCCceEEEecccCcceeEEeecCCCC
Confidence 0136888888 777765 5789999999875432 3579999998876 4578766543233357899999999
Q ss_pred CeEEEEEEEEcCCCCCCCCcccc
Q psy7040 292 HKYKFRVRAVNKQGKSEPLTTTA 314 (716)
Q Consensus 292 ~~y~~~v~a~n~~g~~~~~~~~~ 314 (716)
+.|.|+|+|.+..|.+.++..+.
T Consensus 178 t~Y~vqVRa~~~~~~G~WSeWS~ 200 (206)
T 3v6o_A 178 AVYAVQVRCKRLDGLGYWSNWSN 200 (206)
T ss_dssp SCEEEEEEEEETTSCSCCCCCCC
T ss_pred CEEEEEEEEecCCCCCcCCCCCc
Confidence 99999999999777776666653
No 320
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.10 E-value=2.8e-10 Score=103.92 Aligned_cols=121 Identities=16% Similarity=0.194 Sum_probs=80.6
Q ss_pred eEEEEcCCCCCCeEEEEEEEEcCCC-CCccceeeeccCCCCCCccceeec-----cceeEEEEEEeeEEEEeeeeccCce
Q psy7040 570 TKITIRPLQRSDTAQYTVTATNSQG-KDQVFIEVVVTDKPSAPEGPIQWL-----LTLTDVTWEISNYLQELHSSLMPIS 643 (716)
Q Consensus 570 ~~~~i~~L~~~~~y~~~v~a~n~~G-~~~~s~~~~v~~~p~~~~~~~~~~-----~~~v~l~w~i~~y~v~~~~~~~~~~ 643 (716)
..+.|.++...+.+.|+|.+.|..+ .......+.|..++..|. +.... +..+. |.|.+.
T Consensus 71 ~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~-i~~~~~~~~~g~~v~--------------l~C~~~ 135 (208)
T 3r4d_A 71 GSLLFQMITMKDMGVYTLDMTDENYRRTQATVRFHVHQPVTQPF-LQVTNTTVKELDSVT--------------LTCLSN 135 (208)
T ss_dssp SCEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEEECCCCCCE-EEESCSSCCTTCCEE--------------EEEECS
T ss_pred CeEEEccccccCCeEEEEEEEcccCceeEEEEEEEeccCCCCCE-EecCCceEeeCCCEE--------------EEEECC
Confidence 5788999999999999999999754 323333334555555454 22211 22333 556666
Q ss_pred e---eEEEEeCCeEeeecc----cceeeEEEEccCCCCCcEEEEEEEEcCCCCce-eeEEEEEecCCCCC
Q psy7040 644 L---ESQYLMNDKRVTIDN----VDYFTKITIRPLQRSDTAQYTVTATNSQGKDQ-VFIEVVVTDKPSAP 705 (716)
Q Consensus 644 ~---~~~W~~~~~~~~~~~----~~~~~~~~i~~l~~~~~y~y~~~a~n~~G~~~-~s~~l~v~~~p~~p 705 (716)
+ .+.|+++|..+.... ......|.|.++...|.|.|+|.|.|..|... ....|.|..+|..+
T Consensus 136 ~~pp~i~W~~~g~~l~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v~~~~~~~ 205 (208)
T 3r4d_A 136 DIGANIQWLFNSQSLQLTERMTLSQNNSILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDIIFDPHHH 205 (208)
T ss_dssp CTTCEEEEEETTEECCCCSSEEEETTTTEEEESSCCGGGCEEEEEEEECTTCCEECCCEEECCC------
T ss_pred CCCCceEEEECCEeCCCCCCeEEcCCCCEEEEeccCHHhCeEEEEEEecCCCcccCCceeeeEEeCCccc
Confidence 5 899999998876541 12226899999999999999999999999874 44666666655443
No 321
>3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A
Probab=99.10 E-value=6.3e-10 Score=87.11 Aligned_cols=82 Identities=16% Similarity=0.162 Sum_probs=67.3
Q ss_pred CCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEEe
Q psy7040 324 QPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVN 403 (716)
Q Consensus 324 ~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n 403 (716)
.|.+|.++.+...+.+++.|+|.+|.. ++.+.+|+|.|...+...+...........+++|.+|.|++.|.|+|+|.+
T Consensus 4 ~~~~P~~l~v~~~t~~Sv~l~W~~p~~--~~~i~~Y~v~y~~~~~~~~~~~~~v~~~~t~~~l~~L~p~t~Y~~~V~A~~ 81 (101)
T 3k2m_C 4 VSSVPTKLEVVAATPTSLLISWDAPMS--SSSVYYYRITYGETGGNSPVQEFTVPYSSSTATISGLSPGVDYTITVYAWG 81 (101)
T ss_dssp EEBSSCEEEEEEEETTEEEEEECCCCT--TSCCCEEEEEEEETTCSSCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEE
T ss_pred CCCCCcceEEeecCCCEEEEEecCCCC--CCceeeEEEEEEECCCCCccEEEEcCCCccEEEECCCCCCCEEEEEEEEEe
Confidence 367899999999999999999999762 347999999999866432222233456788999999999999999999999
Q ss_pred CCCC
Q psy7040 404 KGGP 407 (716)
Q Consensus 404 ~~g~ 407 (716)
..|.
T Consensus 82 ~~~~ 85 (101)
T 3k2m_C 82 EDSA 85 (101)
T ss_dssp ECTT
T ss_pred CCcc
Confidence 9887
No 322
>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.10 E-value=8.2e-10 Score=92.42 Aligned_cols=110 Identities=21% Similarity=0.299 Sum_probs=80.2
Q ss_pred CCC-CCCCCeEEeEEeCCeEEEEEECC--CCCCCCccceEEEEEEeCCCCC--eEEccccCcccceEEEcCCCCCCeEEE
Q psy7040 222 KPS-PPGGPLKVSNVHAEGVTLDWKVP--DDDGGQPIEKYVVDKMDEATGR--WTPAGETEGPVTGLEVEGLIPNHKYKF 296 (716)
Q Consensus 222 ~p~-~p~~~~~~~~~~~~~~~l~W~~p--~~~~~~~~~~y~v~~~~~~~~~--~~~~~~~~~~~~~~~i~~L~p~~~y~~ 296 (716)
.|. +|.+ +.+.....+++.|+|++| ...++ .+.+|.|+++..+... +............+.|.+|.+++.|.|
T Consensus 17 ~P~~~P~~-l~~~~~~~~sv~l~W~~p~~~~~~g-~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~ 94 (134)
T 2edx_A 17 TPSAPPQK-VMCVSMGSTTVRVSWVPPPADSRNG-VITQYSVAYEAVDGEDRGRHVVDGISREHSSWDLVGLEKWTEYRV 94 (134)
T ss_dssp CCSSCSEE-EEEECSSSSEEEEEEECCCSTTCSS-CEEEEEEEEEESSSSCCCCEEECCCBTTCSEEEEESCCTTCEEEE
T ss_pred CCCCCCcc-cEEEeCCCCEEEEEecCCCccCCCC-ceeEEEEEEEECCCCCcccEEEEeeCCCccEEEeCCCCCCCEEEE
Confidence 344 5555 777777888999999988 44444 6899999998765432 233332235678999999999999999
Q ss_pred EEEEEcCCCCCCCCcccceEEecCCCCCC-CCCCCcEEEee
Q psy7040 297 RVRAVNKQGKSEPLTTTASIEAKNPFNQP-GKPGTPEIKDF 336 (716)
Q Consensus 297 ~v~a~n~~g~~~~~~~~~~~~~~~~~~~p-~~p~~~~~~~~ 336 (716)
+|+|.|..|.+..+... .+.+....| .+|.++++...
T Consensus 95 ~V~A~n~~G~g~~S~~~---~~~T~~~~P~~~P~~l~~~~~ 132 (134)
T 2edx_A 95 WVRAHTDVGPGPESSPV---LVRTDEDVPSGPPRKVESGPS 132 (134)
T ss_dssp EEEEEETTBCCCCCCCE---EEECCCCSSCCCCCCCCCCCC
T ss_pred EEEEEcCCCcCCCCCCE---EeecCCCCCCCCCceeEEEEc
Confidence 99999999988776553 344455667 68888876543
No 323
>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.09 E-value=9.1e-10 Score=87.24 Aligned_cols=86 Identities=21% Similarity=0.310 Sum_probs=67.1
Q ss_pred CCCCceEEEEeCCeEEEEe--cCCCCCCCCccceEEEEEEcC-CCCcEEEecccCCCeEEecCCCCCcEEEEEEEEEecC
Q psy7040 57 PEGPLEVSNIHKDGCTLKW--NKPKDDGGEPLEGYLVEKYDP-ETGVWIPVGKTREPEMDVTGLTPGHEYKFRVKALNKE 133 (716)
Q Consensus 57 p~~~l~~~~~~~~s~~l~W--~~p~~~~~~~i~~y~v~~~~~-~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~~~~ 133 (716)
++..|++..++.++|.|+| .+|...+|. .+|+|+|+.. +...|.. ....++|.+|.|++.|.|+|+|.|..
T Consensus 12 ~p~~l~~~~~~~~sv~l~W~~~~P~~~ng~--~~Y~v~y~~~~~~~~~~~----~~~~~~i~~L~p~t~Y~f~V~A~~~~ 85 (107)
T 1x5a_A 12 SGLSLKLVKKEPRQLELTWAGSRPRNPGGN--LSYELHVLNQDEEWHQMV----LEPRVLLTKLQPDTTYIVRVRTLTPL 85 (107)
T ss_dssp CSCCCCEEEEETTEEEEECCCCCSSCCSSC--CEEEEEEECSSCEEEEEE----SSSEEEEESCCSSCEEEEEEEEECSS
T ss_pred CCCceEEEecCCCEEEEEECCCCCCCCCCc--eEEEEEEEeCCCCceEEE----ecceEEECCCCCCCEEEEEEEEECCC
Confidence 4456889999999999999 888765554 8999999875 2222222 12449999999999999999999999
Q ss_pred ccCCCccccceEEec
Q psy7040 134 GESEPLETFSSIIAR 148 (716)
Q Consensus 134 g~~~~s~~~~~~~~~ 148 (716)
|.+.+|......+..
T Consensus 86 G~g~~S~~~~~~T~~ 100 (107)
T 1x5a_A 86 GPGPFSPDHEFRTSP 100 (107)
T ss_dssp SCCCCCCCEEEECCC
T ss_pred ccCCCCCCEEEEECC
Confidence 999988877665543
No 324
>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.09 E-value=5.4e-10 Score=91.05 Aligned_cols=94 Identities=16% Similarity=0.187 Sum_probs=69.9
Q ss_pred CCCCCCceEEEEeCCeEEEEecCCCCCCCC---ccceEEEEEEcCCC--CcEEEecccCCCeEEecCCCCCcEEEEEEEE
Q psy7040 55 LDPEGPLEVSNIHKDGCTLKWNKPKDDGGE---PLEGYLVEKYDPET--GVWIPVGKTREPEMDVTGLTPGHEYKFRVKA 129 (716)
Q Consensus 55 ~~p~~~l~~~~~~~~s~~l~W~~p~~~~~~---~i~~y~v~~~~~~~--~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a 129 (716)
+.||..|++...+.++|.|+|++|...++. .+.+|+|+|+..+. ..+..+ ....++++|.||+|++.|.|+|+|
T Consensus 19 p~~P~~l~~~~~s~tsi~lsW~~p~~~~~~i~~~~~~Y~v~y~~~~~~~~~~~~~-~~~~~~~~v~gL~P~T~Y~f~V~A 97 (123)
T 2edd_A 19 MLPPVGVQAVALTHDAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSASAKYKSE-DTTSLSYTATGLKPNTMYEFSVMV 97 (123)
T ss_dssp SCCCEEEEEEEEETTEEEEEEECSSSCSSCCCSCCCCEEEEEEETTCTTCCCCCE-EESSSEEEEESCCTTCEEEEEEEE
T ss_pred CCCCcceEEEEcCCCeEEEEecCCCCCcccccCcCceEEEEEEECCCCCccEEEE-eCCceEEEecCCCCCCEEEEEEEE
Confidence 345555788899999999999987644332 23499999987532 223222 123589999999999999999999
Q ss_pred EecCccCCCccccceEEecC
Q psy7040 130 LNKEGESEPLETFSSIIARD 149 (716)
Q Consensus 130 ~~~~g~~~~s~~~~~~~~~~ 149 (716)
.|..|.+.+|......+...
T Consensus 98 ~n~~g~g~~S~~v~~~T~~~ 117 (123)
T 2edd_A 98 TKNRRSSTWSMTAHATTYEA 117 (123)
T ss_dssp CCSSSCCCCCCCEEEECCCS
T ss_pred eCCCcccCCCCCEEEEccCC
Confidence 99999999998776666544
No 325
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.08 E-value=5.2e-10 Score=117.66 Aligned_cols=97 Identities=37% Similarity=0.705 Sum_probs=87.5
Q ss_pred CCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEE
Q psy7040 323 NQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAV 402 (716)
Q Consensus 323 ~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~ 402 (716)
..|++|..+.+..++.++++|+|.+|..++|++|++|.|+++..++..|..+... ..+.+++.+|.+|..|.|||+|.
T Consensus 8 ~~P~pP~~P~v~~~~~~sv~L~W~~P~~DGgs~I~~Y~vE~~~~~~~~W~~v~~~--~~t~~~V~~L~~g~~Y~FRV~A~ 85 (573)
T 3uto_A 8 PEPEPPRFPIIENILDEAVILSWKPPALDGGSLVTNYTIEKREAMGGSWSPCAKS--RYTYTTIEGLRAGKQYEFRIIAE 85 (573)
T ss_dssp CCCCCCEEEEEEEECSSCEEEEEECCSCCSSSCCCEEEEEEEESSSCCCEEEEEE--SSSEEEECCCCTTCEEEEEEEEE
T ss_pred CCCccCCCCEEEEeeCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEeccc--cCCEEEeCCCCCCCcEeEEEEEE
Confidence 4688899999999999999999999999999999999999999998999988754 56889999999999999999999
Q ss_pred eCCCCCCCCCCCCceEeec
Q psy7040 403 NKGGPGEPSDPTAPHIARA 421 (716)
Q Consensus 403 n~~g~~~~s~~~~~~~~~~ 421 (716)
|..|.|++|.++..+....
T Consensus 86 N~~G~s~PS~~s~~v~~~~ 104 (573)
T 3uto_A 86 NKHGQSKPCEPTAPVLIPG 104 (573)
T ss_dssp ETTEECCCCCCCCCEECC-
T ss_pred cCceEcCCcCCCCCEEcCC
Confidence 9999999998887776543
No 326
>2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.08 E-value=3.4e-10 Score=92.96 Aligned_cols=90 Identities=16% Similarity=0.206 Sum_probs=67.9
Q ss_pred CCCceEE-EEeCCeEEEEecCC--CCCCCCccceEEEEEEcCCC---CcEEEecccCCCeEEecCCCCCcEEEEEEEEEe
Q psy7040 58 EGPLEVS-NIHKDGCTLKWNKP--KDDGGEPLEGYLVEKYDPET---GVWIPVGKTREPEMDVTGLTPGHEYKFRVKALN 131 (716)
Q Consensus 58 ~~~l~~~-~~~~~s~~l~W~~p--~~~~~~~i~~y~v~~~~~~~---~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~~ 131 (716)
|.++.+. ..+.++|.|+|++| ...+ +.|.+|+|+|+.... ..|........+.+.|.+|.+++.|.|+|+|.|
T Consensus 22 P~~~~~~~~~s~~sv~l~W~pp~~~~~~-g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n 100 (124)
T 2dbj_A 22 PLNVTVFLNESSDNVDIRWMKPPTKQQD-GELVGYRISHVWQSAGISKELLEEVGQNGSRARISVQVHNATCTVRIAAVT 100 (124)
T ss_dssp CEEEEEEECSSSSEEEEEEECCSCCSTT-CCEEEEEEEEEEEETTEEEEEEEEEESTTSCEEEECCCSSSEEEECEEEEE
T ss_pred CcceEEEecCCCCEEEEEEcCCCcccCC-CeEeEEEEEEEECCCCCccceEEEeCCCcceEEecCCCCCCEEEEEEEEEC
Confidence 3345555 46788999999998 4334 469999999964322 345443344458999999999999999999999
Q ss_pred cCccCCCccccceEEec
Q psy7040 132 KEGESEPLETFSSIIAR 148 (716)
Q Consensus 132 ~~g~~~~s~~~~~~~~~ 148 (716)
..|.+.+|......+..
T Consensus 101 ~~G~Gp~S~~~~~~T~~ 117 (124)
T 2dbj_A 101 RGGVGPFSDPVKIFIPA 117 (124)
T ss_dssp SSCBCCCCCCEEEECCC
T ss_pred CCccCCCCCCEEEEcCC
Confidence 99999988877666653
No 327
>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.08 E-value=1.6e-10 Score=93.70 Aligned_cols=90 Identities=18% Similarity=0.269 Sum_probs=71.5
Q ss_pred CCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCCcEEEecccCCCeEEecCCCCCcEEEEEEEEEecCccC
Q psy7040 57 PEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETGVWIPVGKTREPEMDVTGLTPGHEYKFRVKALNKEGES 136 (716)
Q Consensus 57 p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~~~~g~~ 136 (716)
++..+++...+.+++.|+|++|.. + .+.+|+|+|+..+...|........+.+.|.+|.+++.|.|+|+|.|..|.+
T Consensus 20 ~P~~l~~~~~~~~sv~l~W~~p~~--~-~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g 96 (115)
T 1x5z_A 20 QPLNFKAEPESETSILLSWTPPRS--D-TIANYELVYKDGEHGEEQRITIEPGTSYRLQGLKPNSLYYFRLAARSPQGLG 96 (115)
T ss_dssp CCEEEEEECSSSSEEEEEEECCSC--C-CCCEEEECBEESSSCCCBCCEECSSSEEEEECCCTTCEEEECEEEECSSCEE
T ss_pred CCccCEeeeCCCCEEEEEEcCCCC--C-CccEEEEEEEeCCCCCceEEecCCCcEEEECCCCCCCeEEEEEEEECCCccc
Confidence 344466777788999999999863 3 6999999998877666544433445899999999999999999999999999
Q ss_pred CCccccceEEecC
Q psy7040 137 EPLETFSSIIARD 149 (716)
Q Consensus 137 ~~s~~~~~~~~~~ 149 (716)
.++......+...
T Consensus 97 ~~S~~~~~~T~~~ 109 (115)
T 1x5z_A 97 ASTAEISARTMQS 109 (115)
T ss_dssp EECCCEEEECCCC
T ss_pred CCCcCEEEecCCC
Confidence 8887776665543
No 328
>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.08 E-value=2.7e-10 Score=90.26 Aligned_cols=92 Identities=21% Similarity=0.304 Sum_probs=74.2
Q ss_pred CCCCCCCCcEEEeeeCCeEEEEecCCC-CCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEE
Q psy7040 323 NQPGKPGTPEIKDFDTDFVELAWTPPE-QNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLA 401 (716)
Q Consensus 323 ~~p~~p~~~~~~~~~~~~i~l~W~~p~-~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a 401 (716)
.+|.+|.++.+...+.+++.|+|.+|. ...++.+.+|.|+++..+...+... ......+.|.+|.+++.|.|+|+|
T Consensus 7 ~pp~~P~~l~~~~~~~~si~l~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~~~~---~~~~~~~~i~~L~p~t~Y~~~V~A 83 (103)
T 2edy_A 7 GPSGFPQNLHVTGLTTSTTELAWDPPVLAERNGRIISYTVVFRDINSQQELQN---ITTDTRFTLTGLKPDTTYDIKVRA 83 (103)
T ss_dssp CCSCCCEEEECSSBCSSCEECEEECCCTTSCSSCCCEEEEEEEETTSCCEEEE---EESSSCCEECSCCTTCCEEEECCE
T ss_pred CCCCCCeeeEEEecCCCEEEEEECCCCCcCCCCcEeEEEEEEEECCCCccEEE---cCCcceEEEcCCCCCCEEEEEEEE
Confidence 456688899998889999999999973 2334479999999998765444432 346788999999999999999999
Q ss_pred EeCCCCCCCCCCCCce
Q psy7040 402 VNKGGPGEPSDPTAPH 417 (716)
Q Consensus 402 ~n~~g~~~~s~~~~~~ 417 (716)
.|..|.|.+|......
T Consensus 84 ~n~~G~g~~S~~~~~~ 99 (103)
T 2edy_A 84 WTSKGSGPLSPSIQSR 99 (103)
T ss_dssp ECSSCBCCCCCCCCCC
T ss_pred ECCCCCCCCCCCEEEE
Confidence 9999999888765543
No 329
>1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.08 E-value=7.1e-10 Score=90.61 Aligned_cols=102 Identities=21% Similarity=0.261 Sum_probs=80.0
Q ss_pred CCCCCCCcEEEeeeCCeEEEEecCCCCC-CC-----cc--ceEEEEEEeecCC-CceEEEeeecCCCCeEEecCCCCCCe
Q psy7040 324 QPGKPGTPEIKDFDTDFVELAWTPPEQN-GG-----SP--IVGYIIEKKEKYS-PIWEKCAQTEGDTPKGKVLDLIEGNQ 394 (716)
Q Consensus 324 ~p~~p~~~~~~~~~~~~i~l~W~~p~~~-~~-----~~--i~~y~v~~~~~~~-~~~~~~~~~~~~~~~~~i~~l~~~~~ 394 (716)
.|.....+.+..++.+++.|+|.+|... ++ +. +..|.|.|...+. ..+... ..+..++++|.+|+|++.
T Consensus 17 ~~s~v~~p~v~~i~s~S~~LsW~~P~~~~~g~~~~~g~~~i~~Yev~~~~k~~~~~~~~~--~~g~~ts~~v~~L~P~T~ 94 (137)
T 1wk0_A 17 LLSNIVKPVASDIQARTVVLTWSPPSSLINGETDESSVPELYGYEVLISSTGKDGKYKSV--YVGEETNITLNDLKPAMD 94 (137)
T ss_dssp HTTCCCCCEEESCCSSCEEEECCCCCCCSTTSSCSSCSCSCCEEEEEECSSCTTSCCEEE--EEESCSEEEECSCCTTCE
T ss_pred ccCCCCCcEEEEEccCEEEEEECCCCCccCccccccccCccEEEEEEEEecCCCCceEEE--EecCccEEEEcCCCCCCE
Confidence 4666778889999999999999998765 33 22 6899999976542 223222 346779999999999999
Q ss_pred EEEEEEEEeCCCCCCCCCCCCceEeecCCCCCc
Q psy7040 395 YEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPY 427 (716)
Q Consensus 395 Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~ 427 (716)
|.|+|+|.|..|.|.+|....+.+....+.+|.
T Consensus 95 Y~~rV~A~n~~G~G~~S~~~~f~T~~~~P~~P~ 127 (137)
T 1wk0_A 95 YHAKVQAEYNSIKGTPSEAEIFTTLSCEPDIPN 127 (137)
T ss_dssp ECEEEEEEETTEECCCCCCCCEECCCSSSCCCS
T ss_pred EEEEEEEEeCCCcCCCCCCEEEECCCCCCCCCC
Confidence 999999999999999999988887766555554
No 330
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.07 E-value=1.4e-09 Score=97.96 Aligned_cols=133 Identities=24% Similarity=0.383 Sum_probs=106.1
Q ss_pred CCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccCCCeEE
Q psy7040 380 DTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKE 459 (716)
Q Consensus 380 ~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~ 459 (716)
....+.|.++...+.+.|+|.+.|..|....+ ..........+|.+. ..+....+..|..+.|.|.+.+.|.+.+.
T Consensus 61 ~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~---~~l~v~~~~~~p~~~-~~~~~~~~~~g~~~~l~C~~~g~p~~~v~ 136 (194)
T 2a38_A 61 GRAKLTIPAVTKANSGRYSLKATNGSGQATST---AELLVKAETAPPNFV-QRLQSMTVRQGSQVRLQVRVTGIPTPVVK 136 (194)
T ss_dssp TEEEEEESSCCGGGCEEEEEEEEETTEEEEEE---EEEEEECCCEEEEEE-ECCCCEEECTTEEEEEEEEEEEESCCEEE
T ss_pred CEEEEEECCCCcccCEEEEEEEEcCCceEeEE---EEEEEccCCCCCEEE-eCCccEEEcCCCEEEEEEEEEEecCCeEE
Confidence 34578999999999999999999987753221 112222222344443 22346778999999999999999999999
Q ss_pred EEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEEEEEE
Q psy7040 460 WLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTV 516 (716)
Q Consensus 460 W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v 516 (716)
|++++..+....++.+...+....|.|.++...|.|.|+|.|.|..|....++.+.|
T Consensus 137 W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 193 (194)
T 2a38_A 137 FYRDGAEIQSSLDFQISQEGDLYSLLIAEAYPEDSGTYSVNATNSVGRATSTAELLV 193 (194)
T ss_dssp EEETTEECCCSSSEEEEEETTEEEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEECCEECCCCCcEEEEEcCCEEEEEECCCChhcCeEEEEEEEeCCCceEEEEEEEE
Confidence 999999998888888888777889999999999999999999999999888877765
No 331
>2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A
Probab=99.07 E-value=6.4e-10 Score=87.66 Aligned_cols=83 Identities=18% Similarity=0.319 Sum_probs=68.3
Q ss_pred CCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecC-CCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEE
Q psy7040 324 QPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKY-SPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAV 402 (716)
Q Consensus 324 ~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~-~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~ 402 (716)
.|.+|.++.+..++.+++.|+|.+|. +.+.+|.|.|.... ...+.. ........++.|.+|.|++.|.|+|+|.
T Consensus 2 ~p~~P~~l~v~~~t~~sv~lsW~~p~----~~i~~Y~v~y~~~~~~~~~~~-~~v~~~~~~~~l~~L~p~t~Y~~~V~A~ 76 (104)
T 2rb8_A 2 RLDAPSQIEVKDVTDTTALITWMPPS----QPVDGFELTYGIKDVPGDRTT-IDLTEDENQYSIGNLKPDTEYEVSLISR 76 (104)
T ss_dssp CCCCCEEEEEESCCSSCEEEEEECCS----SCCSEEEEEEEETTCTTCCEE-EEEETTCCEEEECSCCTTCEEEEEEEEE
T ss_pred CCCCCCccEEEEecCCeEEEEEcCCC----CccceEEEEEEECcCCCceEE-EEcCCCcCEEEeCCCCCCCEEEEEEEEE
Confidence 47789999999999999999999874 36899999997754 233433 3356778899999999999999999999
Q ss_pred eCCCCCCCC
Q psy7040 403 NKGGPGEPS 411 (716)
Q Consensus 403 n~~g~~~~s 411 (716)
|..|.|.++
T Consensus 77 ~~~g~s~p~ 85 (104)
T 2rb8_A 77 RGDMSSNPA 85 (104)
T ss_dssp ETTEECCCE
T ss_pred eCCccCCCE
Confidence 999987653
No 332
>2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.07 E-value=7.2e-10 Score=87.77 Aligned_cols=82 Identities=13% Similarity=0.259 Sum_probs=63.9
Q ss_pred CCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCC----------cEEEecccCCCeEEecCCCCCcEEEE
Q psy7040 56 DPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETG----------VWIPVGKTREPEMDVTGLTPGHEYKF 125 (716)
Q Consensus 56 ~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~----------~~~~~~~~~~~~~~i~~L~~~~~y~~ 125 (716)
+++..|++.+++.++|.|+|++|. ..+++|+|.|....+. ..........++++|.||.|++.|.|
T Consensus 10 p~p~~L~v~~~T~~Si~LsW~~p~----g~v~~Y~i~y~~~~~~~~e~~~~~~~~~~~~v~~~~t~~~l~gL~PgT~Y~~ 85 (112)
T 2cui_A 10 PRLSQLSVTDVTTSSLRLNWEAPP----GAFDSFLLRFGVPSPSTLEPHPRPLLQRELMVPGTRHSAVLRDLRSGTLYSL 85 (112)
T ss_dssp CCCCCCEEESCCSSCEEEECCCCT----TSCSEEEEEEECCCCSSSCCCSSCCCCEEEEEETTCCEEEECSCCTTCEEEE
T ss_pred CCCCceEEEeecCCeEEEEECCCC----CCccEEEEEEEeCCCCccccccccCcceEEEcCCCcCEEEeCCCCCCCEEEE
Confidence 455779999999999999999874 3499999999876542 11222234458999999999999999
Q ss_pred EEEEEecCccCCCccc
Q psy7040 126 RVKALNKEGESEPLET 141 (716)
Q Consensus 126 ~v~a~~~~g~~~~s~~ 141 (716)
+|+|.+..+.+.+...
T Consensus 86 ~V~A~~~~~~s~p~~~ 101 (112)
T 2cui_A 86 TLYGLRGPHKADSIQG 101 (112)
T ss_dssp EEEEECSSSEEEEEEE
T ss_pred EEEEEECCcccCCEEE
Confidence 9999998877765544
No 333
>1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.07 E-value=1.3e-09 Score=89.16 Aligned_cols=93 Identities=22% Similarity=0.240 Sum_probs=74.5
Q ss_pred CCCCceEEEEeCCeEEEEecCCCCC-CC-----Cc--cceEEEEEEcCC-CCcEEEecccCCCeEEecCCCCCcEEEEEE
Q psy7040 57 PEGPLEVSNIHKDGCTLKWNKPKDD-GG-----EP--LEGYLVEKYDPE-TGVWIPVGKTREPEMDVTGLTPGHEYKFRV 127 (716)
Q Consensus 57 p~~~l~~~~~~~~s~~l~W~~p~~~-~~-----~~--i~~y~v~~~~~~-~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v 127 (716)
+...+++..++.+++.|+|.+|... +| .. +..|.|+|+..+ .+.+..+..+..++++|.||+|++.|.|+|
T Consensus 20 ~v~~p~v~~i~s~S~~LsW~~P~~~~~g~~~~~g~~~i~~Yev~~~~k~~~~~~~~~~~g~~ts~~v~~L~P~T~Y~~rV 99 (137)
T 1wk0_A 20 NIVKPVASDIQARTVVLTWSPPSSLINGETDESSVPELYGYEVLISSTGKDGKYKSVYVGEETNITLNDLKPAMDYHAKV 99 (137)
T ss_dssp CCCCCEEESCCSSCEEEECCCCCCCSTTSSCSSCSCSCCEEEEEECSSCTTSCCEEEEEESCSEEEECSCCTTCEECEEE
T ss_pred CCCCcEEEEEccCEEEEEECCCCCccCccccccccCccEEEEEEEEecCCCCceEEEEecCccEEEEcCCCCCCEEEEEE
Confidence 3456788999999999999998764 33 12 589999997654 345555555667899999999999999999
Q ss_pred EEEecCccCCCccccceEEecC
Q psy7040 128 KALNKEGESEPLETFSSIIARD 149 (716)
Q Consensus 128 ~a~~~~g~~~~s~~~~~~~~~~ 149 (716)
+|.|..|.+.+|....+.+...
T Consensus 100 ~A~n~~G~G~~S~~~~f~T~~~ 121 (137)
T 1wk0_A 100 QAEYNSIKGTPSEAEIFTTLSC 121 (137)
T ss_dssp EEEETTEECCCCCCCCEECCCS
T ss_pred EEEeCCCcCCCCCCEEEECCCC
Confidence 9999999999998888777643
No 334
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.06 E-value=7.4e-09 Score=92.03 Aligned_cols=156 Identities=16% Similarity=0.164 Sum_probs=108.4
Q ss_pred cccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCC--eEEEEECCCCCCCceeEEEEEEcCCCc-ee
Q psy7040 433 LSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDK--STKLKVFDSKRGDSGIYTLAVKNSWGT-DK 509 (716)
Q Consensus 433 ~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~--~~~l~i~~l~~~~~~~y~~~a~n~~g~-~~ 509 (716)
+..+.+..|+.+.|.|.+.+.|.+.+.|++++..+.......+..... ...|.|.++...|.|.|+|.+.|..|. .+
T Consensus 9 p~~~~v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~ 88 (182)
T 1rhf_A 9 PVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVEDGGETEIS 88 (182)
T ss_dssp CEEEEEETTCCEEEEEEEESCSSCCEEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESSCTTCEEC
T ss_pred CcceEEeCCCcEEEEEEEeCCCCCeEEEEECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEEcCCCcEEE
Confidence 446789999999999999999999999999999887766655554432 468999999999999999999998775 33
Q ss_pred eEEEEEEE-EEEEEEeCC---CCCCCCceeeEEEEEEecCCCce-eeeEEEccceeeeeccccceeEEEEcCCCCCCeEE
Q psy7040 510 GTAKVTVL-GCSLKWNPP---EDDGGAPIEYYMVEKMETDTGKV-LIKWIRTNDKRVTIDNVDYFTKITIRPLQRSDTAQ 584 (716)
Q Consensus 510 ~s~~~~v~-~v~l~W~~p---~~~~~~~i~~y~v~~~~~~~~~~-~~~w~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~ 584 (716)
....+.+. ...+.-.+. ...+......|.+ .+.+.+ .+.|++.+........ ....+.|.+++ +.+.
T Consensus 89 ~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~----~g~p~p~~v~W~~~~~~~~~~~~--~~~~L~i~~~~--d~G~ 160 (182)
T 1rhf_A 89 QPVWLTVEGVPFFTVEPKDLAVPPNAPFQLSCEA----VGPPEPVTIVWWRGTTKIGGPAP--SPSVLNVTGVT--QSTM 160 (182)
T ss_dssp CCEEEEEECSCEEEECCCCEEECTTCCEEEEEEE----ECSSSCCEEEEEETTEECSCSEE--SSEEEEECCCS--SCEE
T ss_pred EEEEEEEecCCeEEecCcceEecCCCEEEEEeEe----cCCCCCCEEEEEcCCeECCCCCC--CceEEEEeccc--cCeE
Confidence 45556655 111111111 0112222333433 334445 6999998765432111 34788888884 6799
Q ss_pred EEEEEEcCCCCC
Q psy7040 585 YTVTATNSQGKD 596 (716)
Q Consensus 585 ~~v~a~n~~G~~ 596 (716)
|+|.|.|..|..
T Consensus 161 Y~C~a~N~~g~~ 172 (182)
T 1rhf_A 161 FSCEAHNLKGLA 172 (182)
T ss_dssp EEEEEEETTEEE
T ss_pred EEEEEECCCCCc
Confidence 999999999865
No 335
>3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic}
Probab=99.06 E-value=1.1e-09 Score=85.57 Aligned_cols=82 Identities=21% Similarity=0.359 Sum_probs=67.6
Q ss_pred CCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEEeC
Q psy7040 325 PGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNK 404 (716)
Q Consensus 325 p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~ 404 (716)
+.+|.++.+...+.+++.|+|.+|. +.+.+|.|+|+..+...+...........++.|.+|.|++.|.|+|+|.|.
T Consensus 2 ~~~P~~l~v~~~~~~sv~l~W~~p~----~~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~ 77 (98)
T 3teu_A 2 LDAPTDLQVTNVTDTSITVSWTPPS----ATITGYRITYTPSNGPGEPKELTVPPSSTSVTITGLTPGVEYVVSVYALKD 77 (98)
T ss_dssp CCCCEEEEEEEECSSCEEEEEECCS----SCCSEEEEEEEETTSCSCCEEEEECTTCSEEEECSCCTTCEEEEEEEEEET
T ss_pred CCCCCceEEEEecCCEEEEEEeCCC----CcccEEEEEEEECCCCCceEEEEcCCCcCEEEecCCCCCCEEEEEEEEEeC
Confidence 5678899999999999999999972 468999999986553333333445578899999999999999999999999
Q ss_pred CCCCCC
Q psy7040 405 GGPGEP 410 (716)
Q Consensus 405 ~g~~~~ 410 (716)
.|.|.+
T Consensus 78 ~G~s~p 83 (98)
T 3teu_A 78 NQESPP 83 (98)
T ss_dssp TEECCC
T ss_pred CCCCCC
Confidence 998754
No 336
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.06 E-value=2e-09 Score=85.09 Aligned_cols=85 Identities=24% Similarity=0.415 Sum_probs=77.0
Q ss_pred cccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEE
Q psy7040 433 LSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTA 512 (716)
Q Consensus 433 ~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~ 512 (716)
+..+.+..|+.+.|.|.+.+.|.+.+.|++++..+....++.+...+....|.|.++...|.|.|+|.|.|..|......
T Consensus 15 ~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~ 94 (103)
T 3qp3_A 15 MRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYTNTSGVLTLEILDCHTDDSGTYRAVCTNYKGEASDYA 94 (103)
T ss_dssp CCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred CcceEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCEEEEECCCEEEEEEcCCCcccCEEEEEEEEeCCCcEEEEE
Confidence 45678999999999999999999999999999999888888888877888999999999999999999999999888777
Q ss_pred EEEEE
Q psy7040 513 KVTVL 517 (716)
Q Consensus 513 ~~~v~ 517 (716)
.+.+.
T Consensus 95 ~l~V~ 99 (103)
T 3qp3_A 95 TLDVT 99 (103)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77664
No 337
>1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.06 E-value=5.6e-10 Score=86.36 Aligned_cols=82 Identities=21% Similarity=0.429 Sum_probs=66.0
Q ss_pred CCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEEeCC
Q psy7040 326 GKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKG 405 (716)
Q Consensus 326 ~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~ 405 (716)
.+|.++.+...+.+++.|+|.+|. +.+.+|.|.|+..+...+...........++.|.+|.|++.|.|+|+|.|..
T Consensus 3 ~~P~~l~~~~~~~~si~lsW~~p~----~~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~~~~ 78 (94)
T 1j8k_A 3 DRPKGLAFTDVDVDSIKIAWESPQ----GQVSRYRVTYSSPEDGIHELFPAPDGEEDTAELQGLRPGSEYTVSVVALHDD 78 (94)
T ss_dssp CCCCCCEEEEEETTEEEEECCCCS----SCCSCEEEEEEETTTEEEEECCCCCSSCCEEEECSCCCCSEEEEEEEECSSS
T ss_pred CCCCccEEEeecCCEEEEEEcCCC----CCcceEEEEEEeCCCCCceEEecCCCCccEEEeCCCCCCCEEEEEEEEEcCC
Confidence 468899999999999999999875 3689999999876533222222234577899999999999999999999999
Q ss_pred CCCCCC
Q psy7040 406 GPGEPS 411 (716)
Q Consensus 406 g~~~~s 411 (716)
|.|.++
T Consensus 79 g~s~p~ 84 (94)
T 1j8k_A 79 MESQPL 84 (94)
T ss_dssp CCCCCE
T ss_pred CcCCCE
Confidence 887654
No 338
>2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens}
Probab=99.05 E-value=4.6e-10 Score=90.92 Aligned_cols=86 Identities=16% Similarity=0.140 Sum_probs=69.7
Q ss_pred CCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEE
Q psy7040 323 NQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAV 402 (716)
Q Consensus 323 ~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~ 402 (716)
.+|.+|.++.+...+.+++.|+|.+|.. .+.+|+|.|...+...+...........+++|.+|.|++.|.|+|+|.
T Consensus 27 tp~~~P~~l~v~~~t~~Si~lsW~~p~~----~i~~Y~V~y~~~~~~~~~~~~~v~~~~t~~~l~gL~P~t~Y~~~V~A~ 102 (121)
T 2ocf_D 27 SVSDVPTKLEVVAATPTSLLISWDAPAV----TVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAV 102 (121)
T ss_dssp --CCSCEEEEEEEECSSCEEEEEECCSS----CCCEEEEEEEETTTCSCBEEEEEETTCCEEEECCCCTTCEEEEEEEEE
T ss_pred CCCCCCCccEEEecCCCEEEEEEcCCCC----CCcEEEEEEEECCCCCccEEEEeCCCcCEEEeCCCCCCCEEEEEEEEE
Confidence 4578899999999999999999999753 489999999887644333333445678899999999999999999999
Q ss_pred eCCCCCCCCC
Q psy7040 403 NKGGPGEPSD 412 (716)
Q Consensus 403 n~~g~~~~s~ 412 (716)
|..|.|.++.
T Consensus 103 ~~~G~g~~Ss 112 (121)
T 2ocf_D 103 TGLRLMLAGS 112 (121)
T ss_dssp CCHHHHHHSC
T ss_pred eCCCccCCCC
Confidence 9999876654
No 339
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.05 E-value=3.1e-09 Score=85.76 Aligned_cols=92 Identities=29% Similarity=0.446 Sum_probs=79.6
Q ss_pred CCcccccccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcC
Q psy7040 425 SPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNS 504 (716)
Q Consensus 425 ~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~ 504 (716)
+|.|. ..+..+.+..|+.+.|.|.+.+.|.+.+.|++++..+....++.+........|.|.++...|.|.|+|.|.|.
T Consensus 7 pp~i~-~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 85 (114)
T 2cqv_A 7 GPQII-QFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLVENK 85 (114)
T ss_dssp CCEES-CCCCSEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCCSSSEEEEECSSEEEEEETTCCTTTCEEEEEEEECS
T ss_pred CCEEE-eCCCCeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhcCEEEEEEEEEC
Confidence 45444 34567889999999999999999999999999999988888888887777889999999999999999999999
Q ss_pred CCceeeEEEEEEE
Q psy7040 505 WGTDKGTAKVTVL 517 (716)
Q Consensus 505 ~g~~~~s~~~~v~ 517 (716)
.|.....+.+.+.
T Consensus 86 ~g~~~~~~~l~V~ 98 (114)
T 2cqv_A 86 LGSRQAQVNLTVV 98 (114)
T ss_dssp SCEEECCEEEEEE
T ss_pred CCcEEEEEEEEEE
Confidence 9987777666655
No 340
>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.05 E-value=7.6e-10 Score=91.26 Aligned_cols=92 Identities=16% Similarity=0.215 Sum_probs=70.3
Q ss_pred CCCCCceEEEEeCCeEEEEecCCCC-CCCCccceEEEEEEcCCCCcE---------EEecccCCCeEEecCCCCCcEEEE
Q psy7040 56 DPEGPLEVSNIHKDGCTLKWNKPKD-DGGEPLEGYLVEKYDPETGVW---------IPVGKTREPEMDVTGLTPGHEYKF 125 (716)
Q Consensus 56 ~p~~~l~~~~~~~~s~~l~W~~p~~-~~~~~i~~y~v~~~~~~~~~~---------~~~~~~~~~~~~i~~L~~~~~y~~ 125 (716)
.||..+++..++.+++.|+|++|.. ..++.|.+|+|+|+..+...+ ........+++.|.+|.|++.|.|
T Consensus 16 ~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~gY~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~ 95 (125)
T 1uen_A 16 VAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTL 95 (125)
T ss_dssp CCCSSCEEEEEETTEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCCCEEEEEEESSCSEEEEESCCSSCEEEE
T ss_pred CCCceeEEEecCCcEEEEEEcCCCchhcCceEeEEEEEEEECCCCcccccccccceEEEecCCccEEEeCCCCCCCEEEE
Confidence 4566788999999999999999852 123459999999986654322 122233458999999999999999
Q ss_pred EEEEEecCccCCCccccceEEe
Q psy7040 126 RVKALNKEGESEPLETFSSIIA 147 (716)
Q Consensus 126 ~v~a~~~~g~~~~s~~~~~~~~ 147 (716)
+|+|.|..|.+.+|......+.
T Consensus 96 ~V~A~n~~G~g~~S~~~~~~T~ 117 (125)
T 1uen_A 96 NVRVVNGKGEGPASPDRVFNTP 117 (125)
T ss_dssp EEEEEESSCEEEECCCEEEECC
T ss_pred EEEEecCCCCCCCCCCEEEECC
Confidence 9999999999888876655554
No 341
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.05 E-value=3.3e-09 Score=97.10 Aligned_cols=135 Identities=17% Similarity=0.291 Sum_probs=103.4
Q ss_pred CCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEee-----------------cCCCCCcccccccccEEEecCC
Q psy7040 380 DTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIAR-----------------AKKVSPYINRDQLSDIKVRAGS 442 (716)
Q Consensus 380 ~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~-----------------~~~~~P~~~~~~~~~~~~~~g~ 442 (716)
....+.|.++...+.+.|+|.|.|..|....+. ..... .....|.+....+....+..|.
T Consensus 57 ~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~---~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~ 133 (212)
T 2r15_A 57 EQIWLQINEPTPNDKGKYVMELFDGKTGHQKTV---DLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGK 133 (212)
T ss_dssp TEEEEEEESCCGGGCEEEEEEEECSSCEEEEEE---EECHHHHHHHHHHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTC
T ss_pred CEEEEEECCCCcccCEEEEEEEecCCcceEEEE---EEEEeeccchhhhccccCcccccccCCCcccccCCCcEEEccCC
Confidence 345689999999999999999999765432111 00000 0011333333445567899999
Q ss_pred eEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeC-CCeEEEEECCCCCCCceeEEEEEEcCCCceeeEEEEEEE
Q psy7040 443 NFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVND-DKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVL 517 (716)
Q Consensus 443 ~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~-~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v~ 517 (716)
.+.|.|.+.+.|.+.+.|++++..+....++.+... +....|.|.++...|.|.|+|.|.|..|....+..+.+.
T Consensus 134 ~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 209 (212)
T 2r15_A 134 ALNLTCNVWGDPPPEVSWLKNEKALAQTDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVF 209 (212)
T ss_dssp CEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEETTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred eEEEEEEEcCCCCceEEEEECCeECccCCCEEEEEcCCCEEEEEEcCcchHHCeEEEEEEEcCCCcEEEEEEEEEE
Confidence 999999999999999999999999988888777665 667899999999999999999999999988777766653
No 342
>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.05 E-value=8.5e-10 Score=91.65 Aligned_cols=91 Identities=21% Similarity=0.316 Sum_probs=70.8
Q ss_pred CCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCC--cEE-EecccCCCeEEecCCCCCcEEEEEEEEEec
Q psy7040 56 DPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETG--VWI-PVGKTREPEMDVTGLTPGHEYKFRVKALNK 132 (716)
Q Consensus 56 ~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~--~~~-~~~~~~~~~~~i~~L~~~~~y~~~v~a~~~ 132 (716)
.+|..+.+...+.+++.|+|++|...+| .|.+|+|+|+..+.. .+. .......+++.|.+|.+++.|.|+|+|.|.
T Consensus 29 ~~P~~l~~~~~~~~sv~l~W~~p~~~~g-~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~ 107 (130)
T 1wfo_A 29 GPPMGILFPEVRTTSVRLIWQPPAAPNG-IILAYQITHRLNTTTANTATVEVLAPSARQYTATGLKPESVYLFRITAQTR 107 (130)
T ss_dssp CCCCCCEEEEECSSEEEEECCCCSCCCS-CCCEEEEEEEESSCCCSCCCEEEECTTCCEEEEESCCSSSEEEEEEEEECS
T ss_pred CCCCceEEEecCCCEEEEEEcCCCCCCC-ceEEEEEEEEECCCCCceEEEEEeCCCceEEEEcCCCCCCEEEEEEEEEeC
Confidence 4566688999999999999999975444 599999999876543 222 223344589999999999999999999999
Q ss_pred CccCCCccccceEEe
Q psy7040 133 EGESEPLETFSSIIA 147 (716)
Q Consensus 133 ~g~~~~s~~~~~~~~ 147 (716)
.|.+.++......+.
T Consensus 108 ~G~g~~S~~~~~~T~ 122 (130)
T 1wfo_A 108 KGWGEAAEALVVTTE 122 (130)
T ss_dssp SCEEEEEEEEEECCS
T ss_pred CcCCCCcccEEEecC
Confidence 999988766554443
No 343
>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.05 E-value=5.5e-10 Score=93.15 Aligned_cols=109 Identities=18% Similarity=0.287 Sum_probs=79.6
Q ss_pred CCC-CCCCCeEEeEEeCCeEEEEEECCCCC-CCCccceEEEEEEeCCCCCeEEccccCcccceEEEcCCCCCCeEEEEEE
Q psy7040 222 KPS-PPGGPLKVSNVHAEGVTLDWKVPDDD-GGQPIEKYVVDKMDEATGRWTPAGETEGPVTGLEVEGLIPNHKYKFRVR 299 (716)
Q Consensus 222 ~p~-~p~~~~~~~~~~~~~~~l~W~~p~~~-~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~ 299 (716)
.|. +|.+ +.+.....+++.|+|++|... .+..+.+|.|+++......|............+.|.+|.|++.|.|+|+
T Consensus 17 ~P~~~P~~-l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~ 95 (132)
T 1x5h_A 17 VPSAAPQN-LSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRKSDVTETLVSGTQLSQLIEGLDRGTEYNFRVA 95 (132)
T ss_dssp SCCCCCEE-EEEECCSSSEEEEEEECCCTTTCCSCEEEEBCEEEETTEEEEEECCBCCTTCCEEEEECCCSSCEEEEECE
T ss_pred CCCCCCee-eEEEeCCCCEEEEEEeCCCCcCCCceEeEEEEEEEECCCCCccEEEEeCCCccEEEeCCCCCCCEEEEEEE
Confidence 444 5555 777778889999999988752 2336899999998876555554433446778999999999999999999
Q ss_pred EEcCCCCCCCCcccceEEecC---CCCCCCCCCCc
Q psy7040 300 AVNKQGKSEPLTTTASIEAKN---PFNQPGKPGTP 331 (716)
Q Consensus 300 a~n~~g~~~~~~~~~~~~~~~---~~~~p~~p~~~ 331 (716)
|.|..|.+.++......+... +..+|.+|.++
T Consensus 96 A~n~~G~g~~S~~~~~~T~~~~~~~~~~P~~P~~l 130 (132)
T 1x5h_A 96 ALTINGTGPATDWLSAETFESDLDETRVPEVSGPS 130 (132)
T ss_dssp EEETTEEEEECCCEEEECCSSCCCCCCCCCCCCCC
T ss_pred EEcCCccCCCCcCEEeEcCcccCCcccCCCCCCCC
Confidence 999999887776643333221 12467777665
No 344
>3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic}
Probab=99.05 E-value=1.3e-09 Score=85.15 Aligned_cols=82 Identities=32% Similarity=0.517 Sum_probs=65.7
Q ss_pred CCCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCC-CcEEEec-ccCCCeEEecCCCCCcEEEEEEEEEec
Q psy7040 55 LDPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPET-GVWIPVG-KTREPEMDVTGLTPGHEYKFRVKALNK 132 (716)
Q Consensus 55 ~~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~-~~~~~~~-~~~~~~~~i~~L~~~~~y~~~v~a~~~ 132 (716)
+.||.++.+..++.+++.|+|.+|. .++.+|.|+|+...+ +.+.... ....+++.|.+|.|++.|.|+|+|.|.
T Consensus 2 ~~~P~~l~v~~~~~~sv~l~W~~p~----~~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~ 77 (98)
T 3teu_A 2 LDAPTDLQVTNVTDTSITVSWTPPS----ATITGYRITYTPSNGPGEPKELTVPPSSTSVTITGLTPGVEYVVSVYALKD 77 (98)
T ss_dssp CCCCEEEEEEEECSSCEEEEEECCS----SCCSEEEEEEEETTSCSCCEEEEECTTCSEEEECSCCTTCEEEEEEEEEET
T ss_pred CCCCCceEEEEecCCEEEEEEeCCC----CcccEEEEEEEECCCCCceEEEEcCCCcCEEEecCCCCCCEEEEEEEEEeC
Confidence 4577778889999999999999983 459999999985443 3443333 234589999999999999999999999
Q ss_pred CccCCCcc
Q psy7040 133 EGESEPLE 140 (716)
Q Consensus 133 ~g~~~~s~ 140 (716)
.|.|.+..
T Consensus 78 ~G~s~p~~ 85 (98)
T 3teu_A 78 NQESPPLV 85 (98)
T ss_dssp TEECCCEE
T ss_pred CCCCCCeE
Confidence 99887653
No 345
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.04 E-value=6.8e-10 Score=100.36 Aligned_cols=52 Identities=10% Similarity=-0.042 Sum_probs=35.9
Q ss_pred eccCcee---eEEEEeCCeEeeecc--------cceeeEEEEccCCCCCcEEEEEEEEcCCCC
Q psy7040 638 SLMPISL---ESQYLMNDKRVTIDN--------VDYFTKITIRPLQRSDTAQYTVTATNSQGK 689 (716)
Q Consensus 638 ~~~~~~~---~~~W~~~~~~~~~~~--------~~~~~~~~i~~l~~~~~y~y~~~a~n~~G~ 689 (716)
|.|.+.+ .+.|+++|..+.... ......|.|.++...|+|.|+|.|.|..+.
T Consensus 120 L~C~~~~~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~ 182 (198)
T 1ugn_A 120 LQCDSQVAFDGFILCKEGEDEHPQCLNSQPHARGSSRAIFSVGPVSPSRRWWYRCYAYDSNSP 182 (198)
T ss_dssp EEEECSSCCSEEEEEEC------CEEEC------CCEEEEEECCCCTTSCEEEEEEEECTTST
T ss_pred EEEecCCCCcEEEEEECCCccCCccccccccCCCcceeEEEecccCcccCeEEEEEEEeCCCC
Confidence 5555554 899999998764321 112478999999999999999999998774
No 346
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.04 E-value=1e-09 Score=82.05 Aligned_cols=71 Identities=18% Similarity=0.419 Sum_probs=65.2
Q ss_pred cccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcC
Q psy7040 433 LSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNS 504 (716)
Q Consensus 433 ~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~ 504 (716)
+.++.+.+|+.+.|.|.+.+ |.+.+.|++++..+..+.++.+..++....|.|.++.+.|.|.|+|.|.|.
T Consensus 3 lt~v~~~~G~~v~l~C~vs~-p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~ 73 (84)
T 2lu7_A 3 MTRVRSTPGGDLELVVHLSG-PGGPVRWYKDGERLASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDAPQD 73 (84)
T ss_dssp CCCEEECTTSCEEEECCCSC-CSTTCEEEETTEECCCCSSEEEEECSSCEEEEESSCSSTTCEEEEEECTTT
T ss_pred CeEEEEecCCCEEEEEEECC-CCcEEEEEECCEEccccccEEEeecCCeEEEEecCCCCcccEEEEEEECCE
Confidence 45788999999999999976 888999999999999999999999988899999999999999999998654
No 347
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.04 E-value=6.3e-10 Score=101.68 Aligned_cols=116 Identities=20% Similarity=0.247 Sum_probs=80.7
Q ss_pred eEEEEcCCCCCCeEEEEEEEEcCCCCCcccee--eeccCCCCCCcc---ceeeccceeEEEEEEeeEEEEeeeeccCc-e
Q psy7040 570 TKITIRPLQRSDTAQYTVTATNSQGKDQVFIE--VVVTDKPSAPEG---PIQWLLTLTDVTWEISNYLQELHSSLMPI-S 643 (716)
Q Consensus 570 ~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~~--~~v~~~p~~~~~---~~~~~~~~v~l~w~i~~y~v~~~~~~~~~-~ 643 (716)
..+.|.++...+.+.|+|.|.|..|....+.. +.|..+|..+.. .....+..+ .|.|.+ .
T Consensus 68 ~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~--------------~l~C~~~~ 133 (209)
T 1nbq_A 68 TGITFKSVTREDTGTYTCMVSEEGGNSYGEVKVKLIVLVPPSKPTVNIPSSATIGNRA--------------VLTCSEQD 133 (209)
T ss_dssp TEEECSCCCTTSCSEEEEEEEETTSSCEECCEEECCEEBCCCCCCCCCBSEEETTSCE--------------EECCCCCS
T ss_pred cEEEEeeCCHHHCcEEEEEEecCCCCccceEEEEEEEecCCcCCCcccccceecCCEE--------------EEEEeCCC
Confidence 67888999999999999999998774333333 335555554431 111112222 277875 5
Q ss_pred e----eEEEEeCCeEeeeccc-------------ceeeEEEEccCCCCCcEEEEEEEEcCCCCceee--EEEEEe
Q psy7040 644 L----ESQYLMNDKRVTIDNV-------------DYFTKITIRPLQRSDTAQYTVTATNSQGKDQVF--IEVVVT 699 (716)
Q Consensus 644 ~----~~~W~~~~~~~~~~~~-------------~~~~~~~i~~l~~~~~y~y~~~a~n~~G~~~~s--~~l~v~ 699 (716)
+ .+.|++++..+..... .....|.|.++...|.|.|+|.|.|..|....+ ..|.|.
T Consensus 134 ~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~v~l~V~ 208 (209)
T 1nbq_A 134 GSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPMTSNAVRMEAV 208 (209)
T ss_dssp CBSCCEEEEEETTCCCCSCSSSSSSCTTCCCCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCCEECCCBCCEEE
T ss_pred CCCCceeEEEECCeeCCCccccceeeeccceEEcCCcceEEEEeccccCCeEEEEEEeCCcCcccccccEEEEEe
Confidence 5 8999999988765421 133689999999999999999999999998433 444443
No 348
>2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.04 E-value=6e-10 Score=89.88 Aligned_cols=83 Identities=17% Similarity=0.276 Sum_probs=64.2
Q ss_pred CCCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCCcEEEecccCCCeEEecCCCCCcEEEEEEEEEecCc
Q psy7040 55 LDPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETGVWIPVGKTREPEMDVTGLTPGHEYKFRVKALNKEG 134 (716)
Q Consensus 55 ~~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~~~~g 134 (716)
+.||..|++..++.+++.|+|.+|. ..+.+|+|.|+..+............+++.|.+|.|++.|.|+|+|.+..|
T Consensus 8 p~~P~~l~~~~~t~~sv~lsW~~p~----~~i~~Y~v~y~~~~~~~~~~~v~~~~t~~~l~~L~P~t~Y~~~V~A~~~~~ 83 (115)
T 2cuh_A 8 PDGPTQLRALNLTEGFAVLHWKPPQ----NPVDTYDIQVTAPGAPPLQAETPGSAVDYPLHDLVLHTNYTATVRGLRGPN 83 (115)
T ss_dssp CSSCEEEECCCCSSSCEEEEEECCS----SCCSEEEEEEECSSSCCEEEEEETTCSEEEECSCCSSSEEEEEEEEEETTE
T ss_pred CCCCcceEEEeccCCeEEEEEECCC----CCccEEEEEEEcCCCCcEEEEECCCccEEEEeCCCCCCEEEEEEEEEeCCC
Confidence 4556667777889999999999875 248999999986554333222234458999999999999999999999888
Q ss_pred cCCCccc
Q psy7040 135 ESEPLET 141 (716)
Q Consensus 135 ~~~~s~~ 141 (716)
.+.+...
T Consensus 84 ~s~~~~~ 90 (115)
T 2cuh_A 84 LTSPASI 90 (115)
T ss_dssp ECCCEEE
T ss_pred cCCCEEE
Confidence 7776543
No 349
>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.04 E-value=6.1e-10 Score=91.40 Aligned_cols=91 Identities=15% Similarity=0.267 Sum_probs=69.1
Q ss_pred CCCCceEEEEeCCeEEEEecCCCCC-CCCccceEEEEEEcCCCCcEE---Eecc---cCCCeEEecCCCCCcEEEEEEEE
Q psy7040 57 PEGPLEVSNIHKDGCTLKWNKPKDD-GGEPLEGYLVEKYDPETGVWI---PVGK---TREPEMDVTGLTPGHEYKFRVKA 129 (716)
Q Consensus 57 p~~~l~~~~~~~~s~~l~W~~p~~~-~~~~i~~y~v~~~~~~~~~~~---~~~~---~~~~~~~i~~L~~~~~y~~~v~a 129 (716)
||..+.+...+.+++.|+|++|..+ .++.+.+|+|+|+..+...|. .... ...+++.|.+|++++.|.|+|+|
T Consensus 18 ~P~~~~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A 97 (122)
T 1va9_A 18 PPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQA 97 (122)
T ss_dssp CCEEEEEEECSSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSCBCCBCCCCSSEEEEEEESCCSSCCEEEEEEE
T ss_pred CCcceEEEeccCCEEEEEEeCCCCcCCCCcEeEEEEEEEECCCCCCcceEEEEEecCCceeEEEeCCCCCCCEEEEEEEE
Confidence 3445777788899999999999752 345699999999887654332 1111 12378999999999999999999
Q ss_pred EecCccCCCccccceEEe
Q psy7040 130 LNKEGESEPLETFSSIIA 147 (716)
Q Consensus 130 ~~~~g~~~~s~~~~~~~~ 147 (716)
.|..|.+.++......+.
T Consensus 98 ~n~~G~g~~S~~~~~~T~ 115 (122)
T 1va9_A 98 FNRAGTGPSSSEINATTL 115 (122)
T ss_dssp EETTEECCCCCCEECCCC
T ss_pred EcCCCCCCCccCEEEEeC
Confidence 999999988876655544
No 350
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.04 E-value=3.4e-09 Score=97.18 Aligned_cols=170 Identities=19% Similarity=0.232 Sum_probs=112.2
Q ss_pred ccEEEecCCeEEEEEEEeccC----CCeEEEEeC----------------CeEecc-----CCcEEEEe---CCCeEEEE
Q psy7040 434 SDIKVRAGSNFEFDINVIGEP----IPTKEWLCN----------------DITIIS-----KDRFKIVN---DDKSTKLK 485 (716)
Q Consensus 434 ~~~~~~~g~~~~~~~~v~~~p----~~~~~W~~~----------------~~~~~~-----~~~~~~~~---~~~~~~l~ 485 (716)
..+.+..|+.+.|.|.+.+.+ .+.+.|++. +..... ..++.+.. ......|.
T Consensus 8 ~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~ 87 (214)
T 3jz7_A 8 QRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASIN 87 (214)
T ss_dssp EEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCCEE
T ss_pred ceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcccEE
Confidence 457899999999999998877 468999983 333221 22333322 12456799
Q ss_pred ECCCCCCCceeEEEEEEcCCCceeeEEEEEEE----EEEEEEeCCCCCCCCceeeEEEEEEe-cCCCceeeeEEEcccee
Q psy7040 486 VFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVL----GCSLKWNPPEDDGGAPIEYYMVEKME-TDTGKVLIKWIRTNDKR 560 (716)
Q Consensus 486 i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v~----~v~l~W~~p~~~~~~~i~~y~v~~~~-~~~~~~~~~w~~~~~~~ 560 (716)
|.++...|.|.|+|.|.|..|.......+.+. ...+.-......+... .+.... ...+.+.+.|++.+...
T Consensus 88 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v----~l~C~~~~g~p~~~v~W~~~~~~~ 163 (214)
T 3jz7_A 88 VTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSGTRCFVDGSEEIGNDF----KLKCEPKEGSLPLQFEWQKLSDSQ 163 (214)
T ss_dssp ECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCBSCEEEEESCCBTTCCE----EEEEECSBCCSSCEEEEEECSTTC
T ss_pred EccCChhhCeEEEEEEEeCCCccccEEEEEEEcCCCCceeeeecceecCCcE----EEEecCCCCCCCCEEEEEECCCCC
Confidence 99999999999999999999888777777776 1111111122222222 233332 33445669999954322
Q ss_pred e--ee-ccccceeEEEEcCCCCCCeEEEEEEEEcCCCCCccceeeeccCC
Q psy7040 561 V--TI-DNVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTDK 607 (716)
Q Consensus 561 ~--~~-~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~~~~v~~~ 607 (716)
. .. ........+.|.++...+.+.|+|.|.|..|....+..+.|..|
T Consensus 164 ~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~P 213 (214)
T 3jz7_A 164 TMPTPWLAEMTSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVVPP 213 (214)
T ss_dssp CCCGGGGGGTTSSEEEECSCCGGGCEEEEEEEECSSCEEEEEEEECCBCC
T ss_pred ccCccceeccCCCEEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEEEeCC
Confidence 1 11 11223468999999999999999999999998766666666544
No 351
>2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.03 E-value=1.1e-09 Score=86.16 Aligned_cols=86 Identities=14% Similarity=0.171 Sum_probs=70.3
Q ss_pred CCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEE
Q psy7040 323 NQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAV 402 (716)
Q Consensus 323 ~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~ 402 (716)
.++.+|.++.+..++.+++.|+|.+|. +.+.+|+|.|+..++..+. .........++.|.+|.|++.|.|+|.|+
T Consensus 6 ~p~~pP~~l~~~~vt~tsi~vsW~pp~----~~i~~Y~I~y~~~~~~~~~-~~~v~~~~t~~~l~~L~p~T~Y~v~V~A~ 80 (108)
T 2ee3_A 6 SGLAPPRHLGFSDVSHDAARVFWEGAP----RPVRLVRVTYVSSEGGHSG-QTEAPGNATSAMLGPLSSSTTYTVRVTCL 80 (108)
T ss_dssp CCCCCSSCEEEESCCSSCEEEEESCCS----SCCSEEEEEEEETTTCCBC-CEEEETTCCEEEECSCCSSCEEEEEEEEE
T ss_pred cCCCCCceEEEEEccCCeEEEEeeCCC----CCccEEEEEEEeCCCCcee-EEEcCCCcCEEEcCCCCCCCEEEEEEEEE
Confidence 346789999999999999999999863 3699999999877643332 23345677899999999999999999999
Q ss_pred eCCCCCCCCCC
Q psy7040 403 NKGGPGEPSDP 413 (716)
Q Consensus 403 n~~g~~~~s~~ 413 (716)
|..|.|.++..
T Consensus 81 ~~~g~s~p~~~ 91 (108)
T 2ee3_A 81 YPGGGSSTLTG 91 (108)
T ss_dssp CTTSCEEEEEE
T ss_pred eCCCcCCCccC
Confidence 99998876643
No 352
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.03 E-value=1.7e-07 Score=98.18 Aligned_cols=119 Identities=14% Similarity=0.031 Sum_probs=71.4
Q ss_pred eEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecC--CCCCcccccccccEEEecCCeEE-EEEEEeccCCC--e
Q psy7040 383 KGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAK--KVSPYINRDQLSDIKVRAGSNFE-FDINVIGEPIP--T 457 (716)
Q Consensus 383 ~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~--~~~P~~~~~~~~~~~~~~g~~~~-~~~~v~~~p~~--~ 457 (716)
.+.|..........|.|.|.|..+... .. . ....... ..+|.+....... .|..+. |.|.+.+.+++ .
T Consensus 362 ~L~i~~~~~~d~g~y~C~a~n~~~~~~-~~-~-~~~~~~~~~~~~p~v~~~~~~~----~~~~~~~L~C~~~g~~P~~i~ 434 (512)
T 1zvo_C 362 RLTLPRSLWNAGTSVTCTLNHPSLPPQ-RL-M-ALREPAAQAPVKLSLNLLASSD----PPEAASWLLCEVSGFSPPNIL 434 (512)
T ss_pred EEEEchHHhcCCCeEEEEEEeCCCCCC-ce-e-EEeecCCCCCCCCEEEEEccCc----CCCCceEEEEEEeeeCCCCcE
Confidence 356666665666788999999876543 11 1 1111111 2345543221111 677888 99999986543 5
Q ss_pred EEEEeCCeEeccCCcE--EEEeCCCe------EEEEECCCCCCCceeEEEEEEcCCCce
Q psy7040 458 KEWLCNDITIISKDRF--KIVNDDKS------TKLKVFDSKRGDSGIYTLAVKNSWGTD 508 (716)
Q Consensus 458 ~~W~~~~~~~~~~~~~--~~~~~~~~------~~l~i~~l~~~~~~~y~~~a~n~~g~~ 508 (716)
+.|++++..+...... .+...... ..|.|.....++.+.|+|.|.|.....
T Consensus 435 v~W~k~g~~~~~~~~~~~~~~~~~dg~~~~~~s~L~v~~~~~~~~g~YtC~v~h~~l~~ 493 (512)
T 1zvo_C 435 LMWLEDQREVNTSGFAPARPPPQPGSTTFWAWSVLRVPAPPSPQPATYTCVVSHEDSRT 493 (512)
T ss_pred EEEEECCeECcCccccccceeECCCCCEEEEEEEEEECchhcCCCCeEEEEEEecCCCC
Confidence 8999999988653211 11112111 346666666667999999999987654
No 353
>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.03 E-value=3.4e-10 Score=92.76 Aligned_cols=91 Identities=15% Similarity=0.304 Sum_probs=69.5
Q ss_pred CCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCC---cEEEecccCCCeEEecCCCCCcEEEEEEEEEecC
Q psy7040 57 PEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETG---VWIPVGKTREPEMDVTGLTPGHEYKFRVKALNKE 133 (716)
Q Consensus 57 p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~---~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~~~~ 133 (716)
||.++++..++.+++.|+|++|...+ ..|.+|.|+|+..+.. .|........+++.|.+|.+++.|.|+|+|.|..
T Consensus 21 ~P~~l~~~~~~~~sv~l~W~~p~~~~-g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~ 99 (121)
T 2dlh_A 21 APRDVQARMLSSTTILVQWKEPEEPN-GQIQGYRVYYTMDPTQHVNNWMKHNVADSQITTIGNLVPQKTYSVKVLAFTSI 99 (121)
T ss_dssp CCEEEEECCCSSSBCCEEEECCSCCC-SCEEEEEEECCSCTTSCTTTSCCCCCSSCSEECCBSCCSSCEEEEEEEEEESS
T ss_pred CCcccEEEecCCCEEEEEECCCCCCC-CcEeEEEEEEEeCCCCCccccEEEecCCceEEEecCCCCCCEEEEEEEEEeCC
Confidence 34446666778899999999986444 4599999999866432 3333333445789999999999999999999999
Q ss_pred ccCCCccccceEEec
Q psy7040 134 GESEPLETFSSIIAR 148 (716)
Q Consensus 134 g~~~~s~~~~~~~~~ 148 (716)
|.+.++......+..
T Consensus 100 G~g~~S~~~~~~T~~ 114 (121)
T 2dlh_A 100 GDGPLSSDIQVITQT 114 (121)
T ss_dssp CBCCCCCCEEEECCC
T ss_pred ccCCCCCCEEEECCC
Confidence 999888766655543
No 354
>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.03 E-value=2.7e-10 Score=90.24 Aligned_cols=86 Identities=21% Similarity=0.346 Sum_probs=67.0
Q ss_pred CCCceEEEEeCCeEEEEecCCC-CCCCCccceEEEEEEcCCCCcEEEecccCCCeEEecCCCCCcEEEEEEEEEecCccC
Q psy7040 58 EGPLEVSNIHKDGCTLKWNKPK-DDGGEPLEGYLVEKYDPETGVWIPVGKTREPEMDVTGLTPGHEYKFRVKALNKEGES 136 (716)
Q Consensus 58 ~~~l~~~~~~~~s~~l~W~~p~-~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~~~~g~~ 136 (716)
|..+.+...+.+++.|+|++|. ...++.+.+|.|+|+..+...+.... ...+++.|.+|.|++.|.|+|+|.|..|.+
T Consensus 12 P~~l~~~~~~~~si~l~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~~~~~-~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g 90 (103)
T 2edy_A 12 PQNLHVTGLTTSTTELAWDPPVLAERNGRIISYTVVFRDINSQQELQNI-TTDTRFTLTGLKPDTTYDIKVRAWTSKGSG 90 (103)
T ss_dssp CEEEECSSBCSSCEECEEECCCTTSCSSCCCEEEEEEEETTSCCEEEEE-ESSSCCEECSCCTTCCEEEECCEECSSCBC
T ss_pred CeeeEEEecCCCEEEEEECCCCCcCCCCcEeEEEEEEEECCCCccEEEc-CCcceEEEcCCCCCCEEEEEEEEECCCCCC
Confidence 3345566778899999999983 12334699999999887766555443 345889999999999999999999999999
Q ss_pred CCccccce
Q psy7040 137 EPLETFSS 144 (716)
Q Consensus 137 ~~s~~~~~ 144 (716)
.+|.....
T Consensus 91 ~~S~~~~~ 98 (103)
T 2edy_A 91 PLSPSIQS 98 (103)
T ss_dssp CCCCCCCC
T ss_pred CCCCCEEE
Confidence 88866544
No 355
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.02 E-value=4.4e-09 Score=94.96 Aligned_cols=131 Identities=21% Similarity=0.338 Sum_probs=102.5
Q ss_pred CCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccc--cccccEEEecCCeEEEEEEEeccCCCeE
Q psy7040 381 TPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINR--DQLSDIKVRAGSNFEFDINVIGEPIPTK 458 (716)
Q Consensus 381 ~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~--~~~~~~~~~~g~~~~~~~~v~~~p~~~~ 458 (716)
...+.|.++...+.+.|+|.|.|..|....+.. ..... +|.+.. .......+..|..+.|.|.+.+.|.+.+
T Consensus 62 ~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~---l~v~~---~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v 135 (197)
T 3lcy_A 62 THTLTVMTEEQEDEGVYTCIATNEVGEVETSSK---LLLQA---TPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPAM 135 (197)
T ss_dssp EEEEEEECCSGGGCEEEEEEEECSSCEEEEEEE---EEEEE---EEEECTTSCCCSEEEEETTSCEEEEEEEEEESCCEE
T ss_pred EEEEEEecCCccCCEEEEEEEECCCCceeEEEE---EEEEc---CCCCCCCccCCcceeecCCCeEEEEEEEeeeeCCee
Confidence 347889999999999999999988765322211 11111 222221 1234567889999999999999999999
Q ss_pred EEEeCCeEeccCCcEEEEeCCCeEEEEECCCCC-CCceeEEEEEEcCCCceeeEEEEEEE
Q psy7040 459 EWLCNDITIISKDRFKIVNDDKSTKLKVFDSKR-GDSGIYTLAVKNSWGTDKGTAKVTVL 517 (716)
Q Consensus 459 ~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~-~~~~~y~~~a~n~~g~~~~s~~~~v~ 517 (716)
.|++++..+.....+.+...+....|.|.++.. +|.|.|+|.|.|..|....+..+.+.
T Consensus 136 ~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 195 (197)
T 3lcy_A 136 TWFHGQKLLQNSENITIENTEHYTHLVMKNVQRKTHAGKYKVQLSNVFGTVDAILDVEIQ 195 (197)
T ss_dssp EEEETTEECCCCSSEEEEECSSEEEEEESSCCHHHHCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred EEeECCEECCCCCceEEEEcCCEEEEEEccccchhhCceEEEEEEcCcCceEEEEEEEEe
Confidence 999999999888888888887778999999995 89999999999999998888777653
No 356
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.02 E-value=2.8e-09 Score=94.04 Aligned_cols=60 Identities=18% Similarity=0.194 Sum_probs=50.3
Q ss_pred cEEEecCCeEEEEEEEeccCCCe-EEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcC
Q psy7040 435 DIKVRAGSNFEFDINVIGEPIPT-KEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNS 504 (716)
Q Consensus 435 ~~~~~~g~~~~~~~~v~~~p~~~-~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~ 504 (716)
...+.+|+.+.|.|.+.+.|.+. +.|++++..+.. ....|.|.++...|.|.|+|.+.|.
T Consensus 16 ~~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~~----------~~~~L~i~~~~~~d~G~Y~C~~~n~ 76 (175)
T 1fnl_A 16 WYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISS----------QASSYFIDAATVNDSGEYRCQTNLS 76 (175)
T ss_dssp CSEEETTCCEEEEEECCCBTTBCCCEEEETTEEEES----------SCSEEEESSCCGGGCEEEEEECSSS
T ss_pred ceeeeCCCcEEEEeeCCCCCCCcceEEEECCEEccC----------CceEEEEeCCCcccCEEEEEEeeCC
Confidence 45788999999999999988776 789999887642 2458999999999999999999763
No 357
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.02 E-value=1.6e-09 Score=99.73 Aligned_cols=116 Identities=9% Similarity=0.015 Sum_probs=77.0
Q ss_pred eEEEEcCCCCCCeEEEEEEEEcCCCCCccceeee-ccCCCCCCcc---ceee-ccceeEEEEEEeeEEEEeeeeccCcee
Q psy7040 570 TKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVV-VTDKPSAPEG---PIQW-LLTLTDVTWEISNYLQELHSSLMPISL 644 (716)
Q Consensus 570 ~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~~~~-v~~~p~~~~~---~~~~-~~~~v~l~w~i~~y~v~~~~~~~~~~~ 644 (716)
.++.|.+++..+.+.|.|.+.+..+......... +..++..... ...+ ....+. +.|.+.|
T Consensus 79 ~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~c~~~g 144 (218)
T 4frw_A 79 GSVLLRNAVQADEGEYECRVSTFPAGSFQARLRLRVLVPPLPSLNPGPALEEGQGLTLA--------------ASCTAEG 144 (218)
T ss_dssp CCEEESSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCCCEEEECSCEETTCCSEEE--------------EEEEEEE
T ss_pred EEEEEeeccHHHCCceeEEEEeccCceeeeEEEEEEeeeccceeeeeeeeeeeeccccc--------------eeeeccC
Confidence 6799999999999999999998766443333222 2222211110 0111 122222 4555555
Q ss_pred ----eEEEEeCCeEeeec-------ccceeeEEEEccCCCCCcEEEEEEEEcCCCCceeeEEEEEe
Q psy7040 645 ----ESQYLMNDKRVTID-------NVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVT 699 (716)
Q Consensus 645 ----~~~W~~~~~~~~~~-------~~~~~~~~~i~~l~~~~~y~y~~~a~n~~G~~~~s~~l~v~ 699 (716)
.+.|++++..+... .......|.|..+..+|.|.|+|.|.|.+|..+....+.|.
T Consensus 145 ~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~v~ 210 (218)
T 4frw_A 145 SPAPSVTWDTEVKGTTSSRSFKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHILH 210 (218)
T ss_dssp BSCCEEEEEESSCCEEEEEEEECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECC
T ss_pred CcCceEEEEECCcccccCceEecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEEEE
Confidence 89999998877654 11123579999999999999999999999998766665543
No 358
>2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.01 E-value=1.7e-09 Score=85.33 Aligned_cols=82 Identities=20% Similarity=0.253 Sum_probs=69.0
Q ss_pred CCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEE
Q psy7040 323 NQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAV 402 (716)
Q Consensus 323 ~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~ 402 (716)
..|.+|.++.+..++.+++.|+|.+|.. .+.+|.|.|+..+. .|... .......++.|.+|.|++.|.|+|+|.
T Consensus 6 t~p~~P~~l~v~~~~~~sv~lsW~~p~~----~i~~Y~i~y~~~~~-~~~~~-~~~~~~ts~~l~~L~p~t~Y~~~V~A~ 79 (105)
T 2cum_A 6 SGLEAPRDLEAKEVTPRTALLTWTEPPV----RPAGYLLSFHTPGG-QTQEI-LLPGGITSHQLLGLFPSTSYNARLQAM 79 (105)
T ss_dssp TTCCCCEEEEEESCCSSCEEEEEECCSS----CCSEEEEEEECTTS-CEEEE-EECSSCSEEEECSCCTTCEEEEEEEEE
T ss_pred cCCCCCCceEEEeccCCEEEEEEcCCCC----ccceEEEEEEeCCC-ceEEE-EECCCccEEEECCCCCCCEEEEEEEEE
Confidence 5688899999999999999999998742 58999999987653 45443 356678899999999999999999999
Q ss_pred eCCCCCCC
Q psy7040 403 NKGGPGEP 410 (716)
Q Consensus 403 n~~g~~~~ 410 (716)
|..|.+.+
T Consensus 80 ~~~g~s~~ 87 (105)
T 2cum_A 80 WGQSLLPP 87 (105)
T ss_dssp BTTBCCCC
T ss_pred eCCcccCC
Confidence 99887765
No 359
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.01 E-value=2.8e-09 Score=93.81 Aligned_cols=150 Identities=17% Similarity=0.245 Sum_probs=101.0
Q ss_pred cEEEecCCeEEEEEEEec--cCCCeEEEEeCCeEec----------cCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEE
Q psy7040 435 DIKVRAGSNFEFDINVIG--EPIPTKEWLCNDITII----------SKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVK 502 (716)
Q Consensus 435 ~~~~~~g~~~~~~~~v~~--~p~~~~~W~~~~~~~~----------~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~ 502 (716)
.+.+..|+.+.|.|.... .+.+.+.|++++..+. ...++.+... . +|.|.++...|.|.|+|.|.
T Consensus 5 ~v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~--g-sL~I~~v~~~D~G~Y~C~~~ 81 (176)
T 1hng_A 5 TVWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILAN--G-DLKIKNLTRDDSGTYNVTVY 81 (176)
T ss_dssp EEEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTT--S-CEEESSCCGGGCEEEEEEEE
T ss_pred EEEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECCC--C-cEEEcccccccCEEEEEEEE
Confidence 366788999999994333 5567899999986542 3445555222 2 49999999999999999999
Q ss_pred cCCCce--eeEEEEEEE----EEEEEEeCCCCCCCCceeeEEEEEEecCCCceeeeEEEccceeeeeccccceeEEEEcC
Q psy7040 503 NSWGTD--KGTAKVTVL----GCSLKWNPPEDDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDNVDYFTKITIRP 576 (716)
Q Consensus 503 n~~g~~--~~s~~~~v~----~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~i~~ 576 (716)
|..|.. .....+.+. ...+.... .. ..+.....+.+.+.+.|++.+...... ..+.|..
T Consensus 82 n~~g~~~~~~~~~l~V~~~~~~p~i~~~~-----~~----v~L~C~~~g~p~p~i~W~~~g~~l~~~------~~~~i~~ 146 (176)
T 1hng_A 82 STNGTRILNKALDLRILEMVSKPMIYWEC-----SN----ATLTCEVLEGTDVELKLYQGKEHLRSL------RQKTMSY 146 (176)
T ss_dssp ETTCCEEEEEEEEEEEECCCCCCEEEEET-----TT----TEEEEECSSCSSCEEEEEETTEEEEEE------SSSEEEE
T ss_pred eCCCCEEEEEEEEEEEeCCCCCCEEEecC-----Cc----EEEEEEecCCCCcEEEEEECCEECCCC------CcEEEEE
Confidence 999986 445555554 11222211 11 123333334445669999988765433 3355667
Q ss_pred CCCCCeEEEEEEEEcCCCCCccceee
Q psy7040 577 LQRSDTAQYTVTATNSQGKDQVFIEV 602 (716)
Q Consensus 577 L~~~~~y~~~v~a~n~~G~~~~s~~~ 602 (716)
+...+.+.|+|.|.|..|.......+
T Consensus 147 ~~~~d~G~Y~C~a~N~~g~~~~~~~l 172 (176)
T 1hng_A 147 QWTNLRAPFKCKAVNRVSQESEMEVV 172 (176)
T ss_dssp ECSCCSSCEEEEEEETTEEEEEEECC
T ss_pred EEccCCeEEEEEEEecCCCceecccc
Confidence 78999999999999999876555443
No 360
>3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D*
Probab=99.01 E-value=1.5e-09 Score=86.77 Aligned_cols=80 Identities=16% Similarity=0.145 Sum_probs=65.7
Q ss_pred CCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEE
Q psy7040 323 NQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAV 402 (716)
Q Consensus 323 ~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~ 402 (716)
+.|.+|.++.+...+.+++.|+|.+|. +.+.+|.|.|+..+...+...........+++|.+|.|++.|.|+|+|.
T Consensus 2 GvP~~P~~L~v~~~t~~Sv~lsW~~p~----g~i~~Y~v~y~~~~~~~~~~~~~v~~~~ts~~l~gL~P~T~Y~v~V~A~ 77 (114)
T 3qwq_B 2 GVSDVPRDLEVVAATPTSLLISWDSGR----GSYQYYRITYGETGGNSPVQEFTVPGPVHTATISGLKPGVDYTITVYAV 77 (114)
T ss_dssp ---CCCEEEEEEEEETTEEEEEEECCS----CCCSEEEEEEEESSCSSCCEEEEEETTCCEEEECSCCTTCEEEEEEEEE
T ss_pred CCCCCCCceEEEecCCCEEEEEEcCCc----CcccEEEEEEEECCCCCccEEEEeCCCcCEEEeCCCCCCCEEEEEEEEE
Confidence 468899999999999999999999863 3689999999987644333334456778999999999999999999999
Q ss_pred eCCC
Q psy7040 403 NKGG 406 (716)
Q Consensus 403 n~~g 406 (716)
+..|
T Consensus 78 ~~~G 81 (114)
T 3qwq_B 78 TDHK 81 (114)
T ss_dssp EEEE
T ss_pred ECCc
Confidence 9988
No 361
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.01 E-value=3.7e-10 Score=99.52 Aligned_cols=108 Identities=15% Similarity=0.142 Sum_probs=81.1
Q ss_pred eEEEEcCCCCCCeEEEEEEEEcCCCCC--ccceeeeccCCCCCCccceeeccceeEEEEEEeeEEEEeeeeccCcee---
Q psy7040 570 TKITIRPLQRSDTAQYTVTATNSQGKD--QVFIEVVVTDKPSAPEGPIQWLLTLTDVTWEISNYLQELHSSLMPISL--- 644 (716)
Q Consensus 570 ~~~~i~~L~~~~~y~~~v~a~n~~G~~--~~s~~~~v~~~p~~~~~~~~~~~~~v~l~w~i~~y~v~~~~~~~~~~~--- 644 (716)
.++.|.++...+.+.|+|.|.|..|.. .....+.|..++..|. +.. ....+. |.|.+.|
T Consensus 61 gsL~I~~v~~~D~G~Y~C~~~n~~g~~~~~~~~~l~V~~~~~~p~-i~~-~~~~v~--------------L~C~~~g~p~ 124 (176)
T 1hng_A 61 GDLKIKNLTRDDSGTYNVTVYSTNGTRILNKALDLRILEMVSKPM-IYW-ECSNAT--------------LTCEVLEGTD 124 (176)
T ss_dssp SCEEESSCCGGGCEEEEEEEEETTCCEEEEEEEEEEEECCCCCCE-EEE-ETTTTE--------------EEEECSSCSS
T ss_pred CcEEEcccccccCEEEEEEEEeCCCCEEEEEEEEEEEeCCCCCCE-EEe-cCCcEE--------------EEEEecCCCC
Confidence 459999999999999999999998875 3334444666665565 332 222243 6666665
Q ss_pred -eEEEEeCCeEeeecccceeeEEEEccCCCCCcEEEEEEEEcCCCCceeeEEEEE
Q psy7040 645 -ESQYLMNDKRVTIDNVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVV 698 (716)
Q Consensus 645 -~~~W~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~y~~~a~n~~G~~~~s~~l~v 698 (716)
.+.|+++|..+..+ ..+.|..+..+|.|.|+|.|.|..|....+..|.+
T Consensus 125 p~i~W~~~g~~l~~~-----~~~~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~~ 174 (176)
T 1hng_A 125 VELKLYQGKEHLRSL-----RQKTMSYQWTNLRAPFKCKAVNRVSQESEMEVVNC 174 (176)
T ss_dssp CEEEEEETTEEEEEE-----SSSEEEEECSCCSSCEEEEEEETTEEEEEEECCCC
T ss_pred cEEEEEECCEECCCC-----CcEEEEEEEccCCeEEEEEEEecCCCceecccccC
Confidence 89999999988765 33566688899999999999999998887776654
No 362
>3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D*
Probab=99.01 E-value=2.4e-09 Score=85.51 Aligned_cols=75 Identities=17% Similarity=0.255 Sum_probs=60.5
Q ss_pred CCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCCc-EEEe-cccCCCeEEecCCCCCcEEEEEEEEEecC
Q psy7040 56 DPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETGV-WIPV-GKTREPEMDVTGLTPGHEYKFRVKALNKE 133 (716)
Q Consensus 56 ~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~~-~~~~-~~~~~~~~~i~~L~~~~~y~~~v~a~~~~ 133 (716)
.||.+|.+.+++.+++.|+|++|. +.+.+|+|.|+..++.. .... .....++++|.||.|++.|.|+|+|.+..
T Consensus 5 ~~P~~L~v~~~t~~Sv~lsW~~p~----g~i~~Y~v~y~~~~~~~~~~~~~v~~~~ts~~l~gL~P~T~Y~v~V~A~~~~ 80 (114)
T 3qwq_B 5 DVPRDLEVVAATPTSLLISWDSGR----GSYQYYRITYGETGGNSPVQEFTVPGPVHTATISGLKPGVDYTITVYAVTDH 80 (114)
T ss_dssp CCCEEEEEEEEETTEEEEEEECCS----CCCSEEEEEEEESSCSSCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEEEE
T ss_pred CCCCceEEEecCCCEEEEEEcCCc----CcccEEEEEEEECCCCCccEEEEeCCCcCEEEeCCCCCCCEEEEEEEEEECC
Confidence 466678899999999999999874 34999999998766542 1222 23345899999999999999999999998
Q ss_pred c
Q psy7040 134 G 134 (716)
Q Consensus 134 g 134 (716)
|
T Consensus 81 G 81 (114)
T 3qwq_B 81 K 81 (114)
T ss_dssp E
T ss_pred c
Confidence 8
No 363
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.01 E-value=1.8e-09 Score=101.78 Aligned_cols=114 Identities=10% Similarity=0.055 Sum_probs=75.8
Q ss_pred eEEEEcCCCCCCeEEEEEEEEcCCCCCcc-----ceeeeccCCCCCCccceeeccceeEEEEEEeeEEEEeeeeccCcee
Q psy7040 570 TKITIRPLQRSDTAQYTVTATNSQGKDQV-----FIEVVVTDKPSAPEGPIQWLLTLTDVTWEISNYLQELHSSLMPISL 644 (716)
Q Consensus 570 ~~~~i~~L~~~~~y~~~v~a~n~~G~~~~-----s~~~~v~~~p~~~~~~~~~~~~~v~l~w~i~~y~v~~~~~~~~~~~ 644 (716)
..+.|.+++..+.+.|+|.|.|..+.... ...+.|..+|..+. +.......+.+. .|-.+ .|.|.+.|
T Consensus 90 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~-~~~~~~~~~~v~---~g~~v---~L~C~~~g 162 (250)
T 2fbo_J 90 PTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNN-VHVSTAEVVQVD---EGNDI---TMTCPCTD 162 (250)
T ss_dssp CCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSC-CEECCCSEEECC---TTCCE---EECCCEES
T ss_pred ceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCe-EEEecCceEEec---CCCcE---EEEEEecC
Confidence 68999999999999999999998875533 33334555443333 221111111110 11112 27888877
Q ss_pred ----eEEEEeCCeEeeecc-----------------------c-c---eeeEEEEccCCCCCcEEEEEEEEcCCCCc
Q psy7040 645 ----ESQYLMNDKRVTIDN-----------------------V-D---YFTKITIRPLQRSDTAQYTVTATNSQGKD 690 (716)
Q Consensus 645 ----~~~W~~~~~~~~~~~-----------------------~-~---~~~~~~i~~l~~~~~y~y~~~a~n~~G~~ 690 (716)
.+.|++++..+.... . . ....|.|.++...|+|.|+|.|.|.+|..
T Consensus 163 ~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 239 (250)
T 2fbo_J 163 CANANVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCELATGQGEL 239 (250)
T ss_dssp CTTCEEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGGCEEEEEEEESSSSGG
T ss_pred CCCCeeEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcccCEEEEEEecCCcccc
Confidence 999999987664310 0 0 12689999999999999999999977654
No 364
>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.01 E-value=1.1e-09 Score=89.16 Aligned_cols=91 Identities=20% Similarity=0.344 Sum_probs=71.9
Q ss_pred cCCCCCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCCCCCeEEccccCcccceEEEcCCCCCCeEEEEEEE
Q psy7040 221 DKPSPPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEATGRWTPAGETEGPVTGLEVEGLIPNHKYKFRVRA 300 (716)
Q Consensus 221 ~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a 300 (716)
+.|.+|.+ +.+.....+++.|+|.+|...+| .+.+|.|+++......+............+.|.+|.+++.|.|+|+|
T Consensus 16 ~~P~~P~~-l~~~~~~~~sv~l~W~~p~~~~g-~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A 93 (119)
T 1wfn_A 16 DVPGPVGH-LSFSEILDTSLKVSWQEPGEKNG-ILTGYRISWEEYNRTNTRVTHYLPNVTLEYRVTGLTALTTYTIEVAA 93 (119)
T ss_dssp CSCCCCSC-CEEESCCSSEEEEECCCCTTCCS-CCCEEEEEEEESSCGGGCCCEEECSSCCEEEEESCCTTCEEEEEEEE
T ss_pred CCCCCCCc-eEEEECCCCEEEEEEcCCCCCCC-cEEEEEEEEEECCCCCceEEEEeCCCceEEEEcCCCCCCEEEEEEEE
Confidence 46777877 78888889999999999886666 58999999987654332222222356789999999999999999999
Q ss_pred EcCCCCCCCCccc
Q psy7040 301 VNKQGKSEPLTTT 313 (716)
Q Consensus 301 ~n~~g~~~~~~~~ 313 (716)
.|..|.+.++...
T Consensus 94 ~n~~G~g~~S~~~ 106 (119)
T 1wfn_A 94 MTSKGQGQVSAST 106 (119)
T ss_dssp ECSSCEEEEEEEE
T ss_pred EcCCccCCCCCCE
Confidence 9999988776654
No 365
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.00 E-value=2.1e-09 Score=97.29 Aligned_cols=158 Identities=12% Similarity=0.121 Sum_probs=101.5
Q ss_pred EEEecCCeEEEEEEEeccCCCe-EEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEEEE
Q psy7040 436 IKVRAGSNFEFDINVIGEPIPT-KEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKV 514 (716)
Q Consensus 436 ~~~~~g~~~~~~~~v~~~p~~~-~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~ 514 (716)
..+.+|+.+.|.|.+.+.|.+. +.|++++..+.... ..|.|.++...|.|.|+|.|.|... +....+
T Consensus 17 ~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~~~----------~~L~i~~v~~~D~G~Y~C~a~n~~~--s~~~~l 84 (204)
T 3sgj_C 17 YRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQA----------SSYFIDAATVDDSGEYRCQTQLSTL--SDPVQL 84 (204)
T ss_dssp SEEETTCCEEEEEECCSSSSCCCEEEEETTEEESCCS----------SEEEESSCCGGGCEEEEEEETTSBC--CCCEEE
T ss_pred eEEECCCCEEEEEcCCCCCCCcEEEEEECCEEcccCc----------cEEEEecccccCCEEEEEEeCCCcc--cccEEE
Confidence 6789999999999999988776 99999998775432 5899999999999999999998543 334444
Q ss_pred EEEEEEEEEeCCC---CCCCCceeeEEEEEEecCC-CceeeeEEEccceeeeeccccceeEEEEcCCCCCCeEEEEEEEE
Q psy7040 515 TVLGCSLKWNPPE---DDGGAPIEYYMVEKMETDT-GKVLIKWIRTNDKRVTIDNVDYFTKITIRPLQRSDTAQYTVTAT 590 (716)
Q Consensus 515 ~v~~v~l~W~~p~---~~~~~~i~~y~v~~~~~~~-~~~~~~w~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~ 590 (716)
.+.........+. ..+.. ..+....... +.+.+.|++.+...... .....+.|.++...+.+.|+|.|.
T Consensus 85 ~V~~~p~~~~~~~~~v~~G~~----v~L~C~~~~~~p~~~v~W~k~g~~~~~~---~~~~~L~i~~v~~~D~G~Y~C~a~ 157 (204)
T 3sgj_C 85 EVHIGWLLLQAPRWVFKEEDP----IHLRCHSWKNTALHKVTYLQNGKGRKYF---HHNSDFYIPKATLKDSGSYFCRGL 157 (204)
T ss_dssp EEECSSEEEECSCSEEETTCC----EEEEEEEGGGCCCEEEEEEETTEEEEEE---EECCCEEESSCCGGGCEEEEEEEE
T ss_pred EEecCceEecCCceeEeCCCc----EEEEEEecCCCCCceEEEEECCcEeecc---cCCceEEECcCCcccCEEEEEEEE
Confidence 4441100111111 11122 2233332222 34569999987754321 123789999999999999999999
Q ss_pred cCC-CCCccceeeeccCCCCCCc
Q psy7040 591 NSQ-GKDQVFIEVVVTDKPSAPE 612 (716)
Q Consensus 591 n~~-G~~~~s~~~~v~~~p~~~~ 612 (716)
|.. +.......+.|..+|..|.
T Consensus 158 n~~~~~~s~~~~l~V~~~~~~P~ 180 (204)
T 3sgj_C 158 VGSKNVSSETVQITITQGLAVST 180 (204)
T ss_dssp ETTEEEECCCEEEEEEC------
T ss_pred eCCCceecCcEEEEEeCcCCCCc
Confidence 953 3333444445777666665
No 366
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.00 E-value=3.7e-09 Score=96.84 Aligned_cols=116 Identities=13% Similarity=0.141 Sum_probs=75.3
Q ss_pred eEEEEcCCCCCCeEEEEEEEEcCCC---CCccceeeeccCCC-CCCccceee-------ccceeEEEEEEeeEEEEeeee
Q psy7040 570 TKITIRPLQRSDTAQYTVTATNSQG---KDQVFIEVVVTDKP-SAPEGPIQW-------LLTLTDVTWEISNYLQELHSS 638 (716)
Q Consensus 570 ~~~~i~~L~~~~~y~~~v~a~n~~G---~~~~s~~~~v~~~p-~~~~~~~~~-------~~~~v~l~w~i~~y~v~~~~~ 638 (716)
..+.|.+++..+.+.|.|.|.|..| .......+.|...+ ..|. +... .+..+.|.+.+.++.-
T Consensus 70 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~-i~~~~~~~~~~~g~~v~l~C~~~g~~p----- 143 (213)
T 3mj8_L 70 ATLTISKAQAGDEADYYCQSWDGTNSAWVFGSGTKVTVLGQPNAAPS-VTLFPPSSEELKTNQATLVCMINGFYP----- 143 (213)
T ss_dssp EEEEESSCCGGGCEEEEEEEEETTTTEEEEBCCEEEEEECSCCBCCE-EEEECCCHHHHTTTEEEEEEEEEEEBS-----
T ss_pred EEEEECCCChhhCEEEEEEeccCCcceeEEcCceEEEEeCCCCCCCe-EEccCCCcccccCCcEEEEEEeeceeC-----
Confidence 7899999999999999999999887 22223334454333 3333 3221 2455554443322100
Q ss_pred ccCceeeEEEEeCCeEeeec-----------ccceeeEEEEccCCCCCcEEEEEEEEcCCCCceeeE
Q psy7040 639 LMPISLESQYLMNDKRVTID-----------NVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFI 694 (716)
Q Consensus 639 ~~~~~~~~~W~~~~~~~~~~-----------~~~~~~~~~i~~l~~~~~y~y~~~a~n~~G~~~~s~ 694 (716)
..-.+.|+++|..+... .......|.|..+..+|.|.|+|.|.|..|....+.
T Consensus 144 ---~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~ 207 (213)
T 3mj8_L 144 ---ADVAVTWEADGTPITQGVKTTQPSKSDSKYMATSYLTMTADAWKSRNTFICKVTHGGNTVEKSL 207 (213)
T ss_dssp ---SCCEEEEEETTEEECTTEEECCCEEETTEEEEEEEEEEESHHHHSCSCEEEEEEETTEEEEEEE
T ss_pred ---CCeEEEEEcCCcccCCCcccCCcCccCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCccEEeee
Confidence 00078999999988642 011225589999999999999999999886555444
No 367
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.00 E-value=6.3e-09 Score=93.72 Aligned_cols=151 Identities=7% Similarity=0.007 Sum_probs=101.2
Q ss_pred EEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCce--eeEEEE
Q psy7040 437 KVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTD--KGTAKV 514 (716)
Q Consensus 437 ~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~--~~s~~~ 514 (716)
.+..|+.+.|.|.+.+ +.+.+.|++++..+... ............|.|.++...|.|.|+|.|.|..|.. +....+
T Consensus 15 ~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~-~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l 92 (196)
T 3p2t_A 15 VISWGNSVTIWCQGTL-EAREYRLDKEESPAPWD-RQNPLEPKNKARFSIPSMTEDYAGRYRCYYRSPVGWSQPSDPLEL 92 (196)
T ss_dssp EEETTCCEEEEEECCT-TCCEEEEEETTSCSCSE-EECCCSSSSEEEEEESSCCGGGCEEEEEEEEETTEEBCCCCCEEE
T ss_pred cCCCCCcEEEEeeCCC-CCCEEEEEECCCCCccc-ccccccCCceEEEEeccCCcccCceEEEEEeCCCcccCCCccEEE
Confidence 6889999999999988 77899999998776431 1111122456789999999999999999999998832 444555
Q ss_pred EEE----EEEEEEeCC--CCCCCCceeeEEEEEEecCCCceeeeEEEccceeeeec------cccceeEEEEcCCCCCCe
Q psy7040 515 TVL----GCSLKWNPP--EDDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTID------NVDYFTKITIRPLQRSDT 582 (716)
Q Consensus 515 ~v~----~v~l~W~~p--~~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~------~~~~~~~~~i~~L~~~~~ 582 (716)
.+. ...+.-.+. ...+......|..... .+...|++.+....... .......+.|.++...+.
T Consensus 93 ~V~~~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~-----~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~ 167 (196)
T 3p2t_A 93 VMTGAYSKPTLSALPSPLVTSGKSVTLLCQSRSP-----MDTFLLCKERAAHPLLCLRSEHGAQQHQAEFPMSPVTSVHG 167 (196)
T ss_dssp EEECSSCCCEEEEESCSEECTTCCEEEEEEEEEE-----EEEEEEEETTCCCGGGSEEEEEEEEEEEEEEEECSCCGGGC
T ss_pred EecCCCCCCEEEeCCcceecCCCeEEEEEecCCC-----CCEEEEEeCCCcccceeecccccccCcceEEEeCCCcccCC
Confidence 553 112221221 1223333445554432 22388998875432110 112347799999999999
Q ss_pred EEEEEEEEcCCC
Q psy7040 583 AQYTVTATNSQG 594 (716)
Q Consensus 583 y~~~v~a~n~~G 594 (716)
+.|+|.|.|..+
T Consensus 168 G~Y~C~a~n~~~ 179 (196)
T 3p2t_A 168 GTYRCFSSHGFS 179 (196)
T ss_dssp EEEEEEEECGGG
T ss_pred CeEEEEEEcCCC
Confidence 999999999876
No 368
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.00 E-value=7e-09 Score=80.81 Aligned_cols=85 Identities=19% Similarity=0.294 Sum_probs=75.9
Q ss_pred cccEEEecCCeEEEEEEEecc-CCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeE
Q psy7040 433 LSDIKVRAGSNFEFDINVIGE-PIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGT 511 (716)
Q Consensus 433 ~~~~~~~~g~~~~~~~~v~~~-p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s 511 (716)
+.++.+..|..+.|.|.+.+. |.+.+.|++++..+....++.+...+....|.|.++...|.|.|+|.|.|..|....+
T Consensus 8 ~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~ 87 (97)
T 2bk8_A 8 IMHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENSEKYEITYEDGVAILYVKDITKLDDGTYRCKVVNDYGEDSSY 87 (97)
T ss_dssp CCCEEECTTCCEEEEEEEESCCTTCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEE
T ss_pred CcCEEEcCCCcEEEEEEEeccCCCCEEEEEECCEECcCCCCEEEEEcCCeEEEEEecCChhhCeEEEEEEECCCCeEeEE
Confidence 446889999999999999997 9999999999999988888888777778899999999999999999999999988887
Q ss_pred EEEEEE
Q psy7040 512 AKVTVL 517 (716)
Q Consensus 512 ~~~~v~ 517 (716)
..+.+.
T Consensus 88 ~~l~V~ 93 (97)
T 2bk8_A 88 AELFVK 93 (97)
T ss_dssp EEEEET
T ss_pred EEEEEE
Confidence 777653
No 369
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=98.99 E-value=5.9e-09 Score=81.69 Aligned_cols=85 Identities=32% Similarity=0.519 Sum_probs=76.9
Q ss_pred cccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEE
Q psy7040 433 LSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTA 512 (716)
Q Consensus 433 ~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~ 512 (716)
+..+.+..|..+.|.|.+.+.|.+.+.|++++..+....++.+...+....|.|.++...|.|.|+|.|.|..|....+.
T Consensus 13 ~~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 92 (99)
T 3puc_A 13 LQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQGGKYKLSEDKGGFFLEIHKTDTSDSGLYTCTVKNSAGSVSSSC 92 (99)
T ss_dssp CCCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred CccEEEeCCCcEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEeCCEEEEEECCCCcccCEEEEEEEEeCCCcEeEEE
Confidence 45678999999999999999999999999999999888888888877788999999999999999999999999988877
Q ss_pred EEEEE
Q psy7040 513 KVTVL 517 (716)
Q Consensus 513 ~~~v~ 517 (716)
.+.+.
T Consensus 93 ~l~V~ 97 (99)
T 3puc_A 93 KLTIK 97 (99)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77664
No 370
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=98.99 E-value=2e-09 Score=83.11 Aligned_cols=89 Identities=31% Similarity=0.505 Sum_probs=72.7
Q ss_pred CCcccccccccEEEecCCeEEEEEEEeccCCCeEEEEeCC--eEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEE
Q psy7040 425 SPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCND--ITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVK 502 (716)
Q Consensus 425 ~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~--~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~ 502 (716)
+|.+.. .+..+.+..|+.+.|.|.+.|.|.|.+.|++++ ..+.... .+........|.|.++...|.|.|+|.|.
T Consensus 2 ~P~i~~-~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~~--~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 78 (93)
T 1wit_A 2 KPKILT-ASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPEL--LVDAKSSTTSIFFPSAKRADSGNYKLKVK 78 (93)
T ss_dssp CCEECC-CCCEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTTS--EEEEETTEEEEECTTBCGGGCEEEEEEEE
T ss_pred CCeEEc-CCCceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCcE--EEEecCCEEEEEECCCChhcCEEEEEEEE
Confidence 455432 345788999999999999999999999999999 7775443 33344556889999999999999999999
Q ss_pred cCCCceeeEEEEEE
Q psy7040 503 NSWGTDKGTAKVTV 516 (716)
Q Consensus 503 n~~g~~~~s~~~~v 516 (716)
|..|....++.+.|
T Consensus 79 N~~G~~~~~~~l~V 92 (93)
T 1wit_A 79 NELGEDEAIFEVIV 92 (93)
T ss_dssp ETTEEEEEEEEEEE
T ss_pred cCCCeEEEEEEEEE
Confidence 99998888877765
No 371
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=98.99 E-value=1.3e-08 Score=91.18 Aligned_cols=159 Identities=20% Similarity=0.303 Sum_probs=107.6
Q ss_pred ccEEEecCCeEEEEEEEeccC-CCeEEEEe-CCeEec-cCCcEEEEe-CCCeEEEEECCCCCCCceeEEEEEEcCCC-ce
Q psy7040 434 SDIKVRAGSNFEFDINVIGEP-IPTKEWLC-NDITII-SKDRFKIVN-DDKSTKLKVFDSKRGDSGIYTLAVKNSWG-TD 508 (716)
Q Consensus 434 ~~~~~~~g~~~~~~~~v~~~p-~~~~~W~~-~~~~~~-~~~~~~~~~-~~~~~~l~i~~l~~~~~~~y~~~a~n~~g-~~ 508 (716)
..+.+..|+.+.|.|.+.+.+ .+.+.|++ ++..+. ...++.+.. ......|.|.++...|.|.|+|.|.|..| ..
T Consensus 10 ~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~ 89 (191)
T 1epf_A 10 SQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQS 89 (191)
T ss_dssp SSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTTEEE
T ss_pred CCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEEEcCCCcce
Confidence 457789999999999999877 78999999 777776 344555433 35678999999999999999999999984 44
Q ss_pred eeEEEEEEE-EEEEEEeCC---CCCCCCceeeEEEEEEecCCCceeeeEEEccceeeeec----cccceeEEEEcCCCCC
Q psy7040 509 KGTAKVTVL-GCSLKWNPP---EDDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTID----NVDYFTKITIRPLQRS 580 (716)
Q Consensus 509 ~~s~~~~v~-~v~l~W~~p---~~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~----~~~~~~~~~i~~L~~~ 580 (716)
...+.+.+. ...+.-.+. ...+......|.+. +.+.+.+.|++.+....... .......+.|.++...
T Consensus 90 ~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~----g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~ 165 (191)
T 1epf_A 90 EATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVV----SSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIKKT 165 (191)
T ss_dssp EEEEEEEEECCSEEEECCSSEECCTTSCEEECCEEE----CSSCCEEEEEETTEEGGGGCCTTEEECTTSCEEETTCCGG
T ss_pred EEEEEEEeecCceEecCCCcEeecCCCeEEEEEEEC----CCCCCEEEEEECCEEeeccCCceEEEecCCeEEECCCChh
Confidence 455555554 111111110 11222223334433 33455599999876543111 0112347999999999
Q ss_pred CeEEEEEEEEcCCCCC
Q psy7040 581 DTAQYTVTATNSQGKD 596 (716)
Q Consensus 581 ~~y~~~v~a~n~~G~~ 596 (716)
+.+.|+|.|.|..|..
T Consensus 166 d~G~Y~C~a~n~~~~~ 181 (191)
T 1epf_A 166 DEGTYRCEGRILARGE 181 (191)
T ss_dssp GCEEEEEEEEEGGGTE
T ss_pred hCEEEEEEEEEeccee
Confidence 9999999999987643
No 372
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.99 E-value=3.7e-09 Score=82.49 Aligned_cols=83 Identities=24% Similarity=0.358 Sum_probs=71.7
Q ss_pred cccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceee
Q psy7040 431 DQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKG 510 (716)
Q Consensus 431 ~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~ 510 (716)
..+.++.+.+|+.+.|.|.+ .|.+.+.|++++..+..+.++.+...+....|.|.++.++|.|.|+|.|.|. ..+.
T Consensus 12 ~~~~~~~v~~G~~v~l~C~v--~p~p~v~W~k~g~~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~--~~~~ 87 (100)
T 2yuz_A 12 TPLTDQTVNLGKEICLKCEI--SENIPGKWTKNGLPVQESDRLKVVQKGRIHKLVIANALTEDEGDYVFAPDAY--NVTL 87 (100)
T ss_dssp BCCCCEEEETTSCCCEEEEC--SSCCCEEEEETTEECCCCSSEEEEECSSEEEEEESSCCGGGCSEEEEEESSS--CCCE
T ss_pred ccCCceEEcCCCCEEEEEEe--CCCCeEEEEECCEECCCCCcEEEEEeCCEEEEEECCCChhhCEEEEEEEcCC--CeeE
Confidence 34567899999999999999 8889999999999999889999988888889999999999999999999998 3444
Q ss_pred EEEEEEE
Q psy7040 511 TAKVTVL 517 (716)
Q Consensus 511 s~~~~v~ 517 (716)
++.+.|.
T Consensus 88 ~a~L~V~ 94 (100)
T 2yuz_A 88 PAKVHVI 94 (100)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 5555443
No 373
>1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=98.99 E-value=2.5e-09 Score=85.91 Aligned_cols=86 Identities=16% Similarity=0.258 Sum_probs=67.8
Q ss_pred EeeeCCeEEEEecCCCCCCCccceEEEEEEeecCC----CceEEEeeecCCCCeEEecCCCCCCeEEEEEEEEeCCCCCC
Q psy7040 334 KDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYS----PIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGE 409 (716)
Q Consensus 334 ~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~----~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~ 409 (716)
...+.++|.|+|.++ . .++.|.+|+|.|+..+. ..|...........++.|.+|+|++.|.|+|+|+|..|.|+
T Consensus 25 ~a~sstsi~vsW~~~-~-~~g~i~gY~V~Y~~~~~~~~~~~~~~~~v~~~~~~~~~l~~L~p~T~Y~~~V~A~n~~G~Gp 102 (120)
T 1ujt_A 25 VVLTPTTVQVTWTVD-R-QPQFIQGYRVMYRQTSGLQATSSWQNLDAKVPTERSAVLVNLKKGVTYEIKVRPYFNEFQGM 102 (120)
T ss_dssp CCCBTTEEEEEEEES-S-CCSSCCEEEEEEEESSSSSTTTCCEEEECCCTTCCEEEEESCCSSEEEEEEEEEESSSCCCC
T ss_pred EEccCceEEEEEccC-C-CCCcEeeEEEEEEECCCCCCCCccEEEEecCCCcCEEEECCCCCCCEEEEEEEEECCCccCC
Confidence 445789999999964 2 34479999999998764 45765444456678999999999999999999999999999
Q ss_pred CCCCCCceEeec
Q psy7040 410 PSDPTAPHIARA 421 (716)
Q Consensus 410 ~s~~~~~~~~~~ 421 (716)
+|......+...
T Consensus 103 ~S~~v~~~T~e~ 114 (120)
T 1ujt_A 103 DSESKTVRTTEE 114 (120)
T ss_dssp CCCCEEEEECSS
T ss_pred CCCCEEEECCCC
Confidence 998755555443
No 374
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=98.99 E-value=6.1e-09 Score=95.22 Aligned_cols=127 Identities=18% Similarity=0.187 Sum_probs=92.8
Q ss_pred CCCeEEecCCC-CCCeEEEEEEEEeCCCCCCCCCCCCceEeecC----CCCCcccccccccEEEecCCeEEEEEEEeccC
Q psy7040 380 DTPKGKVLDLI-EGNQYEFRVLAVNKGGPGEPSDPTAPHIARAK----KVSPYINRDQLSDIKVRAGSNFEFDINVIGEP 454 (716)
Q Consensus 380 ~~~~~~i~~l~-~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~----~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p 454 (716)
....+.|.++. ..+...|+|.|.|..|....+ ....+... +..|.+.. .+....+..|..+.|.|.+.+.|
T Consensus 61 ~~~~L~i~~v~~~~d~G~Y~C~a~n~~g~~~~~---~~l~V~~~~~~~~~~p~~~~-~~~~~~~~~g~~v~l~C~~~g~p 136 (212)
T 2yd6_A 61 SGSVLRIQPLRTPRDEAIYECVASNNVGEISVS---TRLTVLREDQIPRGFPTIDM-GPQLKVVERTRTATMLCAASGNP 136 (212)
T ss_dssp TEEEEEECSCCTTTTCEEEEEEEEETTEEEEEE---EEEEEECGGGCCTTCCEEEE-CCCCEEEETTSCEEEEEEEECSS
T ss_pred CceEEEEeccCCCCCCeEEEEEEEcCCCcEEEE---EEEEEeccCccCCCcceeec-CCcceeEecCCCEEEEEEecCCC
Confidence 34568899994 889999999999988752211 11111111 12244332 23456788999999999999999
Q ss_pred CCeEEEEeCCeEeccC---CcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceee
Q psy7040 455 IPTKEWLCNDITIISK---DRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKG 510 (716)
Q Consensus 455 ~~~~~W~~~~~~~~~~---~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~ 510 (716)
.+.+.|++++..+... .++..........|.|.++...|.|.|+|.|.|..|....
T Consensus 137 ~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s 195 (212)
T 2yd6_A 137 DPEITWFKDFLPVDTSNNNGRIKQLRSESIGALQIEQSEESDQGKYECVATNSAGTRYS 195 (212)
T ss_dssp CCEEEEEETTEEC------CCEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEC
T ss_pred CCeEEEEECCccccCcCCCceEEEEecCCeEEEEEcCCCcccCEEEEEEEECCCCcccc
Confidence 9999999999888653 4555555566789999999999999999999999997654
No 375
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=98.98 E-value=3.1e-09 Score=101.44 Aligned_cols=117 Identities=15% Similarity=0.123 Sum_probs=80.9
Q ss_pred eEEEEcCCCCCCeEEEEEEEEcCCCCCccceeeeccCCCCCCccceeeccceeEEEEEEeeEEEEeeeeccCc---ee--
Q psy7040 570 TKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTDKPSAPEGPIQWLLTLTDVTWEISNYLQELHSSLMPI---SL-- 644 (716)
Q Consensus 570 ~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~~~~v~~~p~~~~~~~~~~~~~v~l~w~i~~y~v~~~~~~~~~---~~-- 644 (716)
..+.|.+++..+.+.|+|.|.|..+.......+.+...|..|.......+..+. |.|.+ .+
T Consensus 84 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~p~~~~v~~G~~v~--------------L~C~~~~~~~~p 149 (268)
T 3mj6_A 84 GSLLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVLPEEPRDLRVRVGDTTQ--------------MRCSIQSTEEKR 149 (268)
T ss_dssp CCEEECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEECCCCSEEEEETTCCEE--------------ECCBCEESSSSC
T ss_pred EEEEECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEeccCCCccccccCCcEE--------------EEEEecCCCCCC
Confidence 789999999999999999999977665444444432223333312333344444 66777 23
Q ss_pred --eEEEEeC-CeEeee-----------------------------cccceeeEEEEccCCCCCcEEEEEEEEcCCCCcee
Q psy7040 645 --ESQYLMN-DKRVTI-----------------------------DNVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQV 692 (716)
Q Consensus 645 --~~~W~~~-~~~~~~-----------------------------~~~~~~~~~~i~~l~~~~~y~y~~~a~n~~G~~~~ 692 (716)
.+.|+++ +..... ........|.|.++...|+|.|+|.|.|..|....
T Consensus 150 ~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~ 229 (268)
T 3mj6_A 150 VTKVNWMFSSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRK 229 (268)
T ss_dssp CCEEEEEEECTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEE
T ss_pred ccceEEEecCCCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCceEEE
Confidence 8999983 321000 00123468999999999999999999999998888
Q ss_pred eEEEEEec
Q psy7040 693 FIEVVVTD 700 (716)
Q Consensus 693 s~~l~v~~ 700 (716)
+..|.|..
T Consensus 230 ~~~l~V~~ 237 (268)
T 3mj6_A 230 TIVLHVVQ 237 (268)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEEc
Confidence 88888843
No 376
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=98.98 E-value=1.5e-08 Score=90.81 Aligned_cols=129 Identities=19% Similarity=0.230 Sum_probs=100.0
Q ss_pred CCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccCCCeEEE
Q psy7040 381 TPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEW 460 (716)
Q Consensus 381 ~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W 460 (716)
...+.|.++...+.+.|+|.|.|. |....+ .... ...+|.+.. ......+..|..+.|.|.+.+.|.+.+.|
T Consensus 55 ~~~L~i~~~~~~d~G~Y~C~~~n~-~~~~~~---~~l~---V~~~p~~~~-~~~~~~~~~g~~v~l~C~~~g~p~p~i~W 126 (190)
T 2wv3_A 55 NMEYRINKPRAEDSGEYHCVYHFV-SAPKAN---ATIE---VKAAPDITG-HKRSENKNEGQDAMMYCKSVGYPHPEWMW 126 (190)
T ss_dssp EEEEEESSCCGGGCEEEEEEEEET-TEEEEE---EEEE---EECCCEEEE-ECSEEEEETTSCEEEEEEEECSSCCEEEE
T ss_pred cEEEEEecCCcccCEEEEEEEEeC-Cccccc---EEEE---EecCCcccc-cCCcceeeCCCcEEEEEEeCccCCCceEE
Confidence 457889999999999999999997 432111 1111 122555442 23456789999999999999999999999
Q ss_pred Ee--CCeEec---cCCcEEEEeCCCeEEEEECCCC-CCCceeEEEEEEcCCCceeeEEEEEEE
Q psy7040 461 LC--NDITII---SKDRFKIVNDDKSTKLKVFDSK-RGDSGIYTLAVKNSWGTDKGTAKVTVL 517 (716)
Q Consensus 461 ~~--~~~~~~---~~~~~~~~~~~~~~~l~i~~l~-~~~~~~y~~~a~n~~g~~~~s~~~~v~ 517 (716)
++ ++..+. ...++.+...+....|.|.++. ..|.|.|+|.|.|..|....+..+.+.
T Consensus 127 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 127 RKKENGVFEEISNSSGRFFIINKENYTELNIVNLQITEDPGEYECNATNSIGSASVSTVLRVR 189 (190)
T ss_dssp EEEETTEEEECCCTTSCEEEEECSSEEEEEECSCCTTTSCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred EEcCCCceeeeecCCCeEEEecCCCeeEEEEEeccccCCCEEEEEEEEecCCcceeEEEEEEE
Confidence 99 676654 5667777777777899999999 799999999999999998888777653
No 377
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.98 E-value=1.2e-08 Score=94.81 Aligned_cols=68 Identities=7% Similarity=0.090 Sum_probs=46.6
Q ss_pred eccCcee---eEEEEeCCeEeeec--ccceeeEEEEccCCCCCcEEEEEEEEcCC---CCceeeEEEEEecCCCCC
Q psy7040 638 SLMPISL---ESQYLMNDKRVTID--NVDYFTKITIRPLQRSDTAQYTVTATNSQ---GKDQVFIEVVVTDKPSAP 705 (716)
Q Consensus 638 ~~~~~~~---~~~W~~~~~~~~~~--~~~~~~~~~i~~l~~~~~y~y~~~a~n~~---G~~~~s~~l~v~~~p~~p 705 (716)
|.|.+.+ .+.|+|+|..+... .......|.|.++...|+|.|+|.|.|.. ...+....|.|..++..|
T Consensus 121 L~C~~~~~~~~~~w~k~g~~~~~~~~~~~~~~~l~I~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~~~~~~P 196 (242)
T 1p6f_A 121 FYCRLDTATSMFLLLKEGRSSHVQRGYGKVQAEFPLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVTGDIENT 196 (242)
T ss_dssp EEEECTTSCSEEEEEECSSSCEEEEEECSSEEEEEEEECCGGGCEEEEEEEEEETTEECCCCCCEEEEEEC-----
T ss_pred EEEecCCCCCEEEEEECCCccCccccCCCceEEEEeCCCccccCEEEEEEEECCCCcccCCCCCEEEEEeccCCCC
Confidence 5555444 88999998765432 22345789999999999999999999974 223556778888766555
No 378
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=98.97 E-value=4.8e-10 Score=100.99 Aligned_cols=125 Identities=11% Similarity=-0.076 Sum_probs=86.9
Q ss_pred CCCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccCCCeE
Q psy7040 379 GDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTK 458 (716)
Q Consensus 379 ~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~ 458 (716)
.+...+.|.++...+.+.|.|.|.|..|..... ....+. +|.+....+....+.+|..+.|.|.+.|.|.|.+
T Consensus 66 ~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~---~~l~V~----~p~~~~~~~~~~~v~~g~~~~l~C~~~G~P~P~v 138 (203)
T 4fa8_A 66 ANTFFLVVTAANISHDGNYLCRMKLGETEVTKQ---EHLSVV----KPLTLSVHSERSQFPDFSVLTVTCTVNAFPHPHV 138 (203)
T ss_dssp TTEEEEEESSCCGGGCEEEEEEEEETTEEEEEE---EEEEEE----EEEEEEEEEEECCSSCSCCEEEEEEEEEESCCEE
T ss_pred CCEEEEEEccCCHHHCeEEEEEEEcCCCcEEEE---EEEEec----CCceeeecceeEEEcCCCEEEEEEEcCCCCCCEE
Confidence 344578999999999999999999987753221 111111 2222223345566778999999999999999999
Q ss_pred EEEeCCeEec----cCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceee
Q psy7040 459 EWLCNDITII----SKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKG 510 (716)
Q Consensus 459 ~W~~~~~~~~----~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~ 510 (716)
.|++++..+. ...++.+..++.-..+.+.++.+.|.|.|+|.|.|..|....
T Consensus 139 ~W~~~~~~~~~~~~~~~r~~~~~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~ 194 (203)
T 4fa8_A 139 QWLMPEGVEPAPTAANGGVMKEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAHG 194 (203)
T ss_dssp EECCC------------CCEECTTSCEEEEEEEEECSSCCCCEEEEEESSSCEEEE
T ss_pred EEEECCeeecCcccccceEEEeCCCCEEEEEECCCCHHHCEEEEEEEEcCCCEEEE
Confidence 9998765443 233444444555556677899999999999999999998754
No 379
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=98.97 E-value=1.9e-08 Score=95.00 Aligned_cols=108 Identities=16% Similarity=0.132 Sum_probs=60.1
Q ss_pred CCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccC-----CCeEEEEeC
Q psy7040 389 LIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEP-----IPTKEWLCN 463 (716)
Q Consensus 389 l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p-----~~~~~W~~~ 463 (716)
+++++...|+|.|. |....+.... . .. +|.+. ..+..+.+..|+.+.|.|.+.+.+ .+.+.|+++
T Consensus 11 v~~~dsg~Y~C~a~---g~~~~~~~~~-~-~~----~~~~~-~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~ 80 (254)
T 2c1o_A 11 VRPGTSVKLSCKAS---GYSFTNYWMN-W-LR----ELVMT-QSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQ 80 (254)
T ss_dssp ------------------------------------CCCEE-EECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEE
T ss_pred ecCCccEEEEEcCc---hhhhhhhhhh-e-ee----ceeEE-eCCceEEecCCCcEEEEeeccCcccccCCCCceEEEEe
Confidence 56677888999987 3222111111 1 10 22222 224568899999999999999888 389999974
Q ss_pred C--eEe------------ccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCC
Q psy7040 464 D--ITI------------ISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWG 506 (716)
Q Consensus 464 ~--~~~------------~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g 506 (716)
. ..+ ....++.+...+....|.|.++...|.|.|.|.|.|..+
T Consensus 81 ~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~ 137 (254)
T 2c1o_A 81 RPGQSPKRLIYLVSKLDSGDPDRFTGSGSGTDFTLKISRVEAEDLGIYYCVQGSHFP 137 (254)
T ss_dssp CTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSSS
T ss_pred CCCCCceEEEEeccccCCCccceEEEecCCCEEEEEECcCCcccCEEEEEEEEcCcc
Confidence 3 211 113566666666777999999999999999999987654
No 380
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=98.97 E-value=7.9e-09 Score=80.95 Aligned_cols=85 Identities=27% Similarity=0.378 Sum_probs=73.1
Q ss_pred cccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEE-eCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeE
Q psy7040 433 LSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIV-NDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGT 511 (716)
Q Consensus 433 ~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~-~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s 511 (716)
+....+..|..+.|.|.+.+.|.+.+.|++++..+....++.+. ..+....|.|.++...|.|.|+|.|.|..|....+
T Consensus 12 ~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~ 91 (99)
T 1g1c_A 12 IQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAINIAGETSSH 91 (99)
T ss_dssp CCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CcceEEcCCCcEEEEEEEEEeCCCEEEEEECCEECCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEEEEECCCcEEEE
Confidence 45678999999999999999999999999999998876665543 34567789999999999999999999999988887
Q ss_pred EEEEEE
Q psy7040 512 AKVTVL 517 (716)
Q Consensus 512 ~~~~v~ 517 (716)
..+.|.
T Consensus 92 ~~l~V~ 97 (99)
T 1g1c_A 92 AFLLVQ 97 (99)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 776653
No 381
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=98.97 E-value=2.8e-09 Score=96.45 Aligned_cols=131 Identities=13% Similarity=0.049 Sum_probs=86.7
Q ss_pred eeEEEccceeeeeccccceeEEEEcCCCCCCeEEEEEEEEcCCCCCccceeeeccCCCC---CCccceeeccceeEEEEE
Q psy7040 551 IKWIRTNDKRVTIDNVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTDKPS---APEGPIQWLLTLTDVTWE 627 (716)
Q Consensus 551 ~~w~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~~~~v~~~p~---~~~~~~~~~~~~v~l~w~ 627 (716)
+.|++.+...... ...+.|.++...+.+.|+|.|.|... .....+.|..+|. .+. .....+..+.
T Consensus 40 v~W~k~g~~l~~~-----~~~L~i~~v~~~D~G~Y~C~a~n~~~--s~~~~l~V~~~p~~~~~~~-~~v~~G~~v~---- 107 (204)
T 3sgj_C 40 TQWFHNESLISSQ-----ASSYFIDAATVDDSGEYRCQTQLSTL--SDPVQLEVHIGWLLLQAPR-WVFKEEDPIH---- 107 (204)
T ss_dssp EEEEETTEEESCC-----SSEEEESSCCGGGCEEEEEEETTSBC--CCCEEEEEECSSEEEECSC-SEEETTCCEE----
T ss_pred EEEEECCEEcccC-----ccEEEEecccccCCEEEEEEeCCCcc--cccEEEEEecCceEecCCc-eeEeCCCcEE----
Confidence 7898877654322 37899999999999999999987432 2333344443331 111 1112233444
Q ss_pred EeeEEEEeeeeccCcee-----eEEEEeCCeEeeecccceeeEEEEccCCCCCcEEEEEEEEc-CCCCceeeEEEEEecC
Q psy7040 628 ISNYLQELHSSLMPISL-----ESQYLMNDKRVTIDNVDYFTKITIRPLQRSDTAQYTVTATN-SQGKDQVFIEVVVTDK 701 (716)
Q Consensus 628 i~~y~v~~~~~~~~~~~-----~~~W~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~y~~~a~n-~~G~~~~s~~l~v~~~ 701 (716)
|.|.+.+ .+.|+++|..+... .....|.|.++..+|+|.|+|.|.| ..|..+....|.|..+
T Consensus 108 ----------L~C~~~~~~p~~~v~W~k~g~~~~~~--~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l~V~~~ 175 (204)
T 3sgj_C 108 ----------LRCHSWKNTALHKVTYLQNGKGRKYF--HHNSDFYIPKATLKDSGSYFCRGLVGSKNVSSETVQITITQG 175 (204)
T ss_dssp ----------EEEEEGGGCCCEEEEEEETTEEEEEE--EECCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC-
T ss_pred ----------EEEEecCCCCCceEEEEECCcEeecc--cCCceEEECcCCcccCEEEEEEEEeCCCceecCcEEEEEeCc
Confidence 4555532 79999999987543 2346899999999999999999999 4455577788999987
Q ss_pred CCCC
Q psy7040 702 PSAP 705 (716)
Q Consensus 702 p~~p 705 (716)
|.+|
T Consensus 176 ~~~P 179 (204)
T 3sgj_C 176 LAVS 179 (204)
T ss_dssp ----
T ss_pred CCCC
Confidence 7666
No 382
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=98.97 E-value=7e-09 Score=95.70 Aligned_cols=119 Identities=12% Similarity=0.065 Sum_probs=77.7
Q ss_pred eEEEEcCCCCCCeEEEEEEEEcCCCCCccceeeeccCCCCCCcccee----eccceeEEEEEEeeEEEEeeeeccCcee-
Q psy7040 570 TKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTDKPSAPEGPIQ----WLLTLTDVTWEISNYLQELHSSLMPISL- 644 (716)
Q Consensus 570 ~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~~~~v~~~p~~~~~~~~----~~~~~v~l~w~i~~y~v~~~~~~~~~~~- 644 (716)
..+.|.+++..+.+.|+|.|.| .|.......+.|..+|..+. ... ..+..+. |.|.+.|
T Consensus 80 ~~L~I~~v~~~D~G~Y~C~~~~-~~~~~~~~~l~V~~~~~~~~-~~~~~~~~~g~~v~--------------L~C~~~g~ 143 (222)
T 3sbw_C 80 AALQITDVKLQDAGVYRCMISY-GGADYKRITVKVNAPYNKIN-QRILVVDPVTSEHE--------------LTCQAEGY 143 (222)
T ss_dssp EEEEESSCCGGGCEEEEEEEES-SSEEEEEEEEEEEBCCCCCE-EEEEEEETTTTEEE--------------EEEEEEEB
T ss_pred EEEEEcCcccccCeEEEEEEEe-CCCceeEEEEEEECCCCCCC-ceeeeeecCCCcEE--------------EEEEecCC
Confidence 6899999999999999999999 45433334444666665554 221 1234454 4555555
Q ss_pred ---eEEEEeC-CeEeeecc-----ccee---eEEEEccCCCCCcEEEEEEEEcCCCCceeeEEEEEecCCCC
Q psy7040 645 ---ESQYLMN-DKRVTIDN-----VDYF---TKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTDKPSA 704 (716)
Q Consensus 645 ---~~~W~~~-~~~~~~~~-----~~~~---~~~~i~~l~~~~~y~y~~~a~n~~G~~~~s~~l~v~~~p~~ 704 (716)
.+.|+++ |..+.... .... ....+..+...|.|.|+|.|.|..|....+..|.|..+|-.
T Consensus 144 P~p~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~p~~ 215 (222)
T 3sbw_C 144 PKAEVIWTSSDHQVLSGKTTTTNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPEENHTAELVIPELPLA 215 (222)
T ss_dssp SCCEEEEEETTCCEECCEEEEEECC----CEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCCC---
T ss_pred CCCeEEEEECCCceecCccceEEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCccceeeEEEEEecCCccc
Confidence 8999998 55443321 0111 11222245578999999999999999999999999876643
No 383
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=98.96 E-value=1.3e-09 Score=108.20 Aligned_cols=137 Identities=16% Similarity=0.127 Sum_probs=97.2
Q ss_pred eeEEEccceeeeec---cccceeEEEEcCCCCCCeE-EEEEEEEcCCCCCccceeeeccCCCCCCccceeeccceeEEEE
Q psy7040 551 IKWIRTNDKRVTID---NVDYFTKITIRPLQRSDTA-QYTVTATNSQGKDQVFIEVVVTDKPSAPEGPIQWLLTLTDVTW 626 (716)
Q Consensus 551 ~~w~~~~~~~~~~~---~~~~~~~~~i~~L~~~~~y-~~~v~a~n~~G~~~~s~~~~v~~~p~~~~~~~~~~~~~v~l~w 626 (716)
+.|++.+....... .......+.|.++...+.+ .|+|.|.|..|.......+.|..+|.. .......+..+.
T Consensus 190 i~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~~Y~C~a~n~~g~~~~~~~l~V~~~P~i-~~~~~~~g~~v~--- 265 (347)
T 2ifg_A 190 AGWILTELEQSATVMKSGGLPSLGLTLANVTSDLNRKNVTCWAENDVGRAEVSVQVNVSFPASV-QLHTAVEMHHWC--- 265 (347)
T ss_dssp CCEEESCCCSSEEECCCCCSSEEEEEEESCCSTTTTCCEEECCEETTEECCEEECCCCBEEEEE-EECCCEESSSEE---
T ss_pred EEEEcCCceeecccccceecccceEEEeeCChHHCCCeEEEEEEcCCCCEEEEEEEEEcCCCee-eeccCccCceEE---
Confidence 66766554321111 1223478999999999999 999999999887766555556665542 101112233444
Q ss_pred EEeeEEEEeeeeccCcee----eEEEEeCCeEeeeccc-------------ceeeEEEEccCCCCCcEEEEEEEEcCCCC
Q psy7040 627 EISNYLQELHSSLMPISL----ESQYLMNDKRVTIDNV-------------DYFTKITIRPLQRSDTAQYTVTATNSQGK 689 (716)
Q Consensus 627 ~i~~y~v~~~~~~~~~~~----~~~W~~~~~~~~~~~~-------------~~~~~~~i~~l~~~~~y~y~~~a~n~~G~ 689 (716)
+.|.+.| .+.|+++|..+..... .....|.|.++...|+|.|+|.|.|..|.
T Consensus 266 -----------l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~ 334 (347)
T 2ifg_A 266 -----------IPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQ 334 (347)
T ss_dssp -----------EEEEEEEESCCEEEEEETTEECCCCSSEEEEECCCCTTCCCEEEEEEESSCCGGGCEEEEEEEEETTEE
T ss_pred -----------EEEEeeecCCCcEEEEeCCEECCCCcceeeEEEeecCCCcccceEEEECCCCcccCceEEEEEecCCCc
Confidence 5555555 8999999998875411 12466999999999999999999999999
Q ss_pred ceeeEEEEEecCC
Q psy7040 690 DQVFIEVVVTDKP 702 (716)
Q Consensus 690 ~~~s~~l~v~~~p 702 (716)
...++.|.|..+|
T Consensus 335 ~~~~~~l~V~~~P 347 (347)
T 2ifg_A 335 ASASIMAAFMDNP 347 (347)
T ss_dssp EEEEEEECSCCCC
T ss_pred eeeEEEEEecCCC
Confidence 9999999888765
No 384
>3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic}
Probab=98.96 E-value=3.1e-09 Score=82.48 Aligned_cols=80 Identities=19% Similarity=0.343 Sum_probs=64.9
Q ss_pred CCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEEeCCC
Q psy7040 327 KPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGG 406 (716)
Q Consensus 327 ~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g 406 (716)
+|.++.+..++.+++.|+|.+|.. .+.+|.|.|+..+...............++.|.+|.|++.|.|+|+|.|..|
T Consensus 4 ~P~~l~v~~~t~~Sv~lsW~~p~~----~i~~Y~v~y~~~~~~~~~~~~~~~~~~t~~~l~gL~P~t~Y~~~V~A~~~~g 79 (98)
T 3tes_A 4 APKNLVVSEVTEDSLRLSWTAPDA----AFDSFMIQYQESEKVGEAINLTVPGSERSYDLTGLKPGTEYTVSIYGVKGGH 79 (98)
T ss_dssp CCEEEEEESCCSSCEEEEEECCTT----SCSEEEEEEEETTBCSCCEEEEEETTCSEEEECSCCTTCEEEEEEEEEETTE
T ss_pred CCCceEEEecCCCeEEEEecCCcC----ccceEEEEEEECCCCCceEEEEcCCCcCEEEECCCCCCCEEEEEEEEEeCCc
Confidence 577899999999999999999742 5899999999865322223334566789999999999999999999999988
Q ss_pred CCCC
Q psy7040 407 PGEP 410 (716)
Q Consensus 407 ~~~~ 410 (716)
.|.+
T Consensus 80 ~S~p 83 (98)
T 3tes_A 80 RSNP 83 (98)
T ss_dssp EBCC
T ss_pred ccCC
Confidence 7754
No 385
>2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.95 E-value=3.4e-09 Score=83.50 Aligned_cols=84 Identities=17% Similarity=0.215 Sum_probs=64.1
Q ss_pred CCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEE
Q psy7040 323 NQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAV 402 (716)
Q Consensus 323 ~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~ 402 (716)
..|.+|.++++...+.+++.|+|.+|.. +.+|.|+|+..+...|...........++.|.+|.|++.|.|+|+|.
T Consensus 7 ~~~~~P~~l~~~~~~~~sv~lsW~~p~~-----~~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~ 81 (104)
T 2dkm_A 7 GPLPPPRALTLAAVTPRTVHLTWQPSAG-----ATHYLVRCSPASPKGEEEEREVQVGRPEVLLDGLEPGRDYEVSVQSL 81 (104)
T ss_dssp CSCCCCCCCEEEEECSSEEEEECCCCSS-----CSEEEEEEEESSSCCSSCCEEEEESSSEEEEESCCTTCCEEEEEEEE
T ss_pred CCCCCCceeEEEecCCCEEEEEEeCCCC-----CCeEEEEEEECCCCCCcceEEEecCCCEEEECCCCCCCEEEEEEEEE
Confidence 4567899999999999999999998642 38999999876643332111111122399999999999999999999
Q ss_pred eCCCCCCCC
Q psy7040 403 NKGGPGEPS 411 (716)
Q Consensus 403 n~~g~~~~s 411 (716)
|..|.+.+.
T Consensus 82 ~~~~~s~p~ 90 (104)
T 2dkm_A 82 RGPEGSEAR 90 (104)
T ss_dssp CSSSBCCCE
T ss_pred CCCCCCCCE
Confidence 998877654
No 386
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.95 E-value=1.4e-08 Score=90.62 Aligned_cols=50 Identities=6% Similarity=0.104 Sum_probs=38.1
Q ss_pred eccCcee---eEEEEeCCeEeeec--ccceeeEEEEccCCCCCcEEEEEEEEcCC
Q psy7040 638 SLMPISL---ESQYLMNDKRVTID--NVDYFTKITIRPLQRSDTAQYTVTATNSQ 687 (716)
Q Consensus 638 ~~~~~~~---~~~W~~~~~~~~~~--~~~~~~~~~i~~l~~~~~y~y~~~a~n~~ 687 (716)
|.|.+.+ .+.|+++|..+... .......|.|.++..+|+|.|+|.|.|..
T Consensus 118 L~C~~~~~~~~~~w~k~g~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~ 172 (188)
T 1oll_A 118 FYCRLDTATSMFLLLKEGRSSHVQRGYGKVQAEFPLGPVTTAHRGTYRCFGSYNN 172 (188)
T ss_dssp EEEECSSSCSEEEEEEESSSCEEEEEECSSEEEEEEEECCGGGCEEEEEECEEET
T ss_pred EEEEcCCCCCEEEEEECCccccccccCCCceeEEEECCCCcCCCcEEEEEEEcCC
Confidence 5555444 78999998765432 12344789999999999999999999965
No 387
>2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.95 E-value=3.3e-10 Score=89.62 Aligned_cols=88 Identities=20% Similarity=0.304 Sum_probs=72.0
Q ss_pred CCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEE
Q psy7040 323 NQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAV 402 (716)
Q Consensus 323 ~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~ 402 (716)
..|.+|.++.+...+.+++.|+|.+|. +.+.+|+|.|+..+...+...........+++|.+|.|++.|.|+|+|.
T Consensus 6 ~~p~~P~~l~v~~~t~~si~lsW~~p~----g~i~~Y~v~y~~~~~~~~~~~~~v~~~~~~~~l~~L~p~t~Y~~~V~A~ 81 (105)
T 2ekj_A 6 SGRSPPSNLALASETPDSLQVSWTPPL----GRVLHYWLTYAPASGLGPEKSVSVPGARSHVTLPDLQAATKYRVLVSAI 81 (105)
T ss_dssp TTCCCCEEEEEEEEETTEEEEEEECCS----SCCSBBCBBCCCTTSCSCCCCBCCBTTSSEEEECSCCSSCCCBCBBCBB
T ss_pred cCCCCCCceEEEeCCCCEEEEEEeCCC----CcceEEEEEEEECCCCCccEEEEeCCCcCEEEeCCCCCCCEEEEEEEEE
Confidence 568899999999999999999999973 3689999999876533222223345678999999999999999999999
Q ss_pred eCCCCCCCCCCC
Q psy7040 403 NKGGPGEPSDPT 414 (716)
Q Consensus 403 n~~g~~~~s~~~ 414 (716)
|..|.+.++...
T Consensus 82 ~~~g~g~~s~~~ 93 (105)
T 2ekj_A 82 YAAGRSEAVSAT 93 (105)
T ss_dssp CSSCBCCCBCCB
T ss_pred eCCccCCccccE
Confidence 999999877654
No 388
>2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens}
Probab=98.95 E-value=2.1e-09 Score=87.05 Aligned_cols=90 Identities=16% Similarity=0.190 Sum_probs=66.3
Q ss_pred EEEecCCCCCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCCCCCeEEccccCcccceEEEcCCCCCCeEEE
Q psy7040 217 VIVLDKPSPPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEATGRWTPAGETEGPVTGLEVEGLIPNHKYKF 296 (716)
Q Consensus 217 ~~v~~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~ 296 (716)
.....+|.+|.+ |.+.....+++.|+|++|.. .+.+|.|.+...+...+..........+.+.|.+|.|++.|.|
T Consensus 23 ~~~~tp~~~P~~-l~v~~~t~~Si~lsW~~p~~----~i~~Y~V~y~~~~~~~~~~~~~v~~~~t~~~l~gL~P~t~Y~~ 97 (121)
T 2ocf_D 23 YFQGSVSDVPTK-LEVVAATPTSLLISWDAPAV----TVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTI 97 (121)
T ss_dssp ------CCSCEE-EEEEEECSSCEEEEEECCSS----CCCEEEEEEEETTTCSCBEEEEEETTCCEEEECCCCTTCEEEE
T ss_pred eeccCCCCCCCc-cEEEecCCCEEEEEEcCCCC----CCcEEEEEEEECCCCCccEEEEeCCCcCEEEeCCCCCCCEEEE
Confidence 334456788888 89999999999999998753 4899999998765533211112234578999999999999999
Q ss_pred EEEEEcCCCCCCCCc
Q psy7040 297 RVRAVNKQGKSEPLT 311 (716)
Q Consensus 297 ~v~a~n~~g~~~~~~ 311 (716)
+|.|.|..|.+..+.
T Consensus 98 ~V~A~~~~G~g~~Ss 112 (121)
T 2ocf_D 98 TVYAVTGLRLMLAGS 112 (121)
T ss_dssp EEEEECCHHHHHHSC
T ss_pred EEEEEeCCCccCCCC
Confidence 999999998876544
No 389
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=98.94 E-value=6.6e-09 Score=93.05 Aligned_cols=131 Identities=19% Similarity=0.280 Sum_probs=97.1
Q ss_pred CCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCccccc-ccccEEEecCCeEEEEEEEeccCCCeEE
Q psy7040 381 TPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRD-QLSDIKVRAGSNFEFDINVIGEPIPTKE 459 (716)
Q Consensus 381 ~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~-~~~~~~~~~g~~~~~~~~v~~~p~~~~~ 459 (716)
...+.|.++...+.+.|+|.+.+..+....... ..... ..+|.+... ......+..|..+.|.|.+.+.|.+.+.
T Consensus 56 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~-~~l~v---~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~ 131 (189)
T 2v5t_A 56 NNNLQILNINKSDEGIYRCEGRVEARGEIDFRD-IIVIV---NVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAIS 131 (189)
T ss_dssp TSCEEETTCCGGGCEEEEEEEEETTTTEEEEEE-EEEEE---EEEEEEECSCCEEEEETTSCCCEEEECEEEEESCCEEE
T ss_pred CCCEEEeeCCHhHCcEEEEEEEEcCCCceEEEE-EEEEe---cCCCCcccccccccccccCCCcEEEEEEEccCCCCeEE
Confidence 346999999999999999999988753221111 11111 113333211 1224567789999999999999999999
Q ss_pred EEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEEEEEEE
Q psy7040 460 WLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVL 517 (716)
Q Consensus 460 W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v~ 517 (716)
|++++..+....++.+... ...|.|.++...|.|.|+|.|.|..|....+..+.+.
T Consensus 132 W~~~g~~~~~~~~~~~~~~--~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 187 (189)
T 2v5t_A 132 WFRNGKLIEENEKYILKGS--NTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVF 187 (189)
T ss_dssp EEETTEECCCSSSEEEETT--TTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEECCEECcCCCcEEEecC--CCEEEEcCCChhhCeeEEEEEEeCCCceeEEEEEEEE
Confidence 9999999887777665433 4589999999999999999999999998887776653
No 390
>2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.94 E-value=2.7e-10 Score=90.09 Aligned_cols=87 Identities=16% Similarity=0.239 Sum_probs=67.7
Q ss_pred CCCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCC-cEEEec-ccCCCeEEecCCCCCcEEEEEEEEEec
Q psy7040 55 LDPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETG-VWIPVG-KTREPEMDVTGLTPGHEYKFRVKALNK 132 (716)
Q Consensus 55 ~~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~-~~~~~~-~~~~~~~~i~~L~~~~~y~~~v~a~~~ 132 (716)
+.||.+|++..++.+++.|+|++|. ..+.+|+|+|+..... .+.... ....++++|.+|.|++.|.|+|+|.|.
T Consensus 8 p~~P~~l~v~~~t~~si~lsW~~p~----g~i~~Y~v~y~~~~~~~~~~~~~v~~~~~~~~l~~L~p~t~Y~~~V~A~~~ 83 (105)
T 2ekj_A 8 RSPPSNLALASETPDSLQVSWTPPL----GRVLHYWLTYAPASGLGPEKSVSVPGARSHVTLPDLQAATKYRVLVSAIYA 83 (105)
T ss_dssp CCCCEEEEEEEEETTEEEEEEECCS----SCCSBBCBBCCCTTSCSCCCCBCCBTTSSEEEECSCCSSCCCBCBBCBBCS
T ss_pred CCCCCceEEEeCCCCEEEEEEeCCC----CcceEEEEEEEECCCCCccEEEEeCCCcCEEEeCCCCCCCEEEEEEEEEeC
Confidence 3456668889999999999999983 3599999999765543 232222 234589999999999999999999999
Q ss_pred CccCCCccccceE
Q psy7040 133 EGESEPLETFSSI 145 (716)
Q Consensus 133 ~g~~~~s~~~~~~ 145 (716)
.|.+.++.....+
T Consensus 84 ~g~g~~s~~~~~T 96 (105)
T 2ekj_A 84 AGRSEAVSATGQT 96 (105)
T ss_dssp SCBCCCBCCBCCC
T ss_pred CccCCccccEEEc
Confidence 9999887665443
No 391
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=98.94 E-value=1.2e-09 Score=86.50 Aligned_cols=65 Identities=12% Similarity=0.101 Sum_probs=53.7
Q ss_pred eccCcee----eEEEEeCCeEeeec------ccceeeEEEEccCCCCCcEEEEEEEEcCCCCceeeEEEEEecCC
Q psy7040 638 SLMPISL----ESQYLMNDKRVTID------NVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTDKP 702 (716)
Q Consensus 638 ~~~~~~~----~~~W~~~~~~~~~~------~~~~~~~~~i~~l~~~~~y~y~~~a~n~~G~~~~s~~l~v~~~p 702 (716)
|.|.+.| .+.|+++|+.+..+ ..+....|.|.++...|+|.|+|.|.|..|....++.|.|..+|
T Consensus 33 l~C~~~G~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~pP 107 (107)
T 3knb_B 33 LKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAAAVTVLEPP 107 (107)
T ss_dssp EEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC--
T ss_pred EEEEEEEecCCEEEEEECcccccceeeEEEeecCceEEEEEecCChhhCEEEEEEEEECCCEEEEEEEEEEEcCC
Confidence 5566665 89999999998765 12334689999999999999999999999999999999999876
No 392
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.94 E-value=3.3e-09 Score=88.06 Aligned_cols=85 Identities=27% Similarity=0.459 Sum_probs=72.8
Q ss_pred ccccEEEecCCeEEEEEEEeccCCCeEEEEeCC----------------------------eEe-ccCCcEEEEeCCCeE
Q psy7040 432 QLSDIKVRAGSNFEFDINVIGEPIPTKEWLCND----------------------------ITI-ISKDRFKIVNDDKST 482 (716)
Q Consensus 432 ~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~----------------------------~~~-~~~~~~~~~~~~~~~ 482 (716)
.+..+.+..|..+.|.|.+.|.|.|.+.|++++ ..+ ....++.+...+...
T Consensus 24 ~p~~~~v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~~~~s 103 (139)
T 1gxe_A 24 IPDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKDRS 103 (139)
T ss_dssp CCCEEEESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEETTEE
T ss_pred CCCCEEEeCCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeCCCEE
Confidence 356789999999999999999999999999998 443 244566666666678
Q ss_pred EEEECCCCCCCceeEEEEEEcCCCceeeEEEEEE
Q psy7040 483 KLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTV 516 (716)
Q Consensus 483 ~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v 516 (716)
.|.|.++.+.|.|.|+|.|.|..|....++.+.|
T Consensus 104 ~L~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V 137 (139)
T 1gxe_A 104 IFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKV 137 (139)
T ss_dssp EEECSCCCTTTCEEEEEEEECSSCEEEEEEEEEE
T ss_pred EEEECCCCcccCEEEEEEEEeCCceEEEEEEEEE
Confidence 9999999999999999999999999888877765
No 393
>1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=98.94 E-value=3.4e-09 Score=84.38 Aligned_cols=92 Identities=15% Similarity=0.164 Sum_probs=69.3
Q ss_pred CCCCCCceEEEEe--CCeEEEEecCCCC--CCCCccceEEEEEEcCCCCcEEEecccCCCeEEecCCCCCcEEEEEEEEE
Q psy7040 55 LDPEGPLEVSNIH--KDGCTLKWNKPKD--DGGEPLEGYLVEKYDPETGVWIPVGKTREPEMDVTGLTPGHEYKFRVKAL 130 (716)
Q Consensus 55 ~~p~~~l~~~~~~--~~s~~l~W~~p~~--~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~ 130 (716)
++||..|.+.... .+++.|+|++|.. +.+..+..|+|+|+..+...|........+++.|.+|.+++.|.|+|+|.
T Consensus 8 p~pP~~l~v~~~~~~~~~l~lsW~~P~~w~~~~~~~l~Y~v~y~~~~~~~w~~~~~~~~~~~~l~~L~p~t~Y~~~VRa~ 87 (109)
T 1uc6_A 8 PDPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHVELSNGTAHTITDAYAGKEYIIQVAAK 87 (109)
T ss_dssp CCCCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCCCEEESSCSEEEETTCCSSSCEEEEEECC
T ss_pred cCCCcceEEEEcCCCCCEEEEEECCCCCccCCCcEEEEEEEEEEECCCCCcEEEecccCCEEEEeCCCCCCEEEEEEEEE
Confidence 4566666666554 4799999999874 22335889999999887777765555556899999999999999999999
Q ss_pred ecCccCCCccccceEEe
Q psy7040 131 NKEGESEPLETFSSIIA 147 (716)
Q Consensus 131 ~~~g~~~~s~~~~~~~~ 147 (716)
+. |.+.+|..+.....
T Consensus 88 ~~-g~g~wS~WS~~~~~ 103 (109)
T 1uc6_A 88 DN-EIGTWSDWSVAAHA 103 (109)
T ss_dssp BS-SSCCCCCCCEEEEE
T ss_pred eC-CCCCcCcCCCCeee
Confidence 85 77776666655443
No 394
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=98.94 E-value=1.4e-08 Score=79.75 Aligned_cols=85 Identities=33% Similarity=0.629 Sum_probs=74.7
Q ss_pred cccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEec--cCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceee
Q psy7040 433 LSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITII--SKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKG 510 (716)
Q Consensus 433 ~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~--~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~ 510 (716)
+..+.+..|..+.|.|.+.+.|.+.+.|++++..+. ...++.+...+....|.|.++...|.|.|+|.|.|..|....
T Consensus 12 ~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~ 91 (100)
T 3irg_A 12 PSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGNEFGSDSA 91 (100)
T ss_dssp CSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEETTEEEEE
T ss_pred CCcEEEcCCCcEEEEEEEEEcCCCceEEEECCEEeecCCCCEEEEEecCCEEEEEEeecCcccCEEEEEEEEeCCCcEEE
Confidence 456789999999999999999999999999998876 455777777777789999999999999999999999999887
Q ss_pred EEEEEEE
Q psy7040 511 TAKVTVL 517 (716)
Q Consensus 511 s~~~~v~ 517 (716)
...+.+.
T Consensus 92 ~~~l~V~ 98 (100)
T 3irg_A 92 TVNIHIR 98 (100)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 7777664
No 395
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=98.93 E-value=9.2e-09 Score=94.03 Aligned_cols=129 Identities=20% Similarity=0.299 Sum_probs=93.3
Q ss_pred CeEEecCCCC-CCeEEEEEEEEeCCCCCCCCCCCCceEeecC----CCCCcccccccccEEEecCCeEEEEEEEeccCCC
Q psy7040 382 PKGKVLDLIE-GNQYEFRVLAVNKGGPGEPSDPTAPHIARAK----KVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIP 456 (716)
Q Consensus 382 ~~~~i~~l~~-~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~----~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~ 456 (716)
..+.|.++.. .+.+.|+|.|.|..|...... ....+... ..+|.+. ..+....+..|..+.|.|.+.+.|.+
T Consensus 64 ~~L~i~~v~~~~d~G~Y~C~~~n~~g~~~~~~--~~l~V~~~~~~~~~~p~~~-~~~~~~~~~~g~~v~l~C~~~g~p~p 140 (212)
T 2yd1_A 64 SILRIEPVRAGRDDAPYECVAENGVGDAVSAD--ATLTIYEGDKTPAGFPVIT-QGPGTRVIEVGHTVLMTCKAIGNPTP 140 (212)
T ss_dssp EEEEESSCCTTTTCSEEEEEEECSSSCEEEEE--EEEEEECTTCSCTTCCEEE-ECCCCEEEETTCCEEECCEEECSSCC
T ss_pred EEEEEEecCCCCcCceEEEEEEeCCCCeEEee--EEEEEecccCCCCCCCeeE-eCCCceEeecCCeEEEEEEeccCCCC
Confidence 5788999998 889999999999877521111 11111111 1124433 22345778899999999999999999
Q ss_pred eEEEEeCCeEecc-CCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeE-EEEEEE
Q psy7040 457 TKEWLCNDITIIS-KDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGT-AKVTVL 517 (716)
Q Consensus 457 ~~~W~~~~~~~~~-~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s-~~~~v~ 517 (716)
.+.|++++..+.. ..++.+. . ..|.|.++...|.|.|+|.|.|..|..... +.+.|.
T Consensus 141 ~i~W~~~~~~~~~~~~~~~~~-~---~~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V~ 199 (212)
T 2yd1_A 141 NIYWIKNQTKVDMSNPRYSLK-D---GFLQIENSREEDQGKYECVAENSMGTEHSKATNLYVK 199 (212)
T ss_dssp EEEEEETTEECCTTSTTEEEE-T---TEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred eEEEEECCeEcccCCCeEEcc-C---CeEEEccCChhhCEEEEEEeecCCCceeEEEEEEEEE
Confidence 9999999998865 3344332 2 289999999999999999999999987653 555554
No 396
>1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=98.93 E-value=6e-09 Score=83.99 Aligned_cols=88 Identities=18% Similarity=0.240 Sum_probs=65.5
Q ss_pred CCCCceEEEEeCCeEEEEecCCCC-CCCCccceEEEEEEcCCCCcEEEecccCCCeEEecCCCCCcEEEEEEEEEecCcc
Q psy7040 57 PEGPLEVSNIHKDGCTLKWNKPKD-DGGEPLEGYLVEKYDPETGVWIPVGKTREPEMDVTGLTPGHEYKFRVKALNKEGE 135 (716)
Q Consensus 57 p~~~l~~~~~~~~s~~l~W~~p~~-~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~~~~g~ 135 (716)
||.++.+.. +.++|.|+|++|.. ..++.|.+|+|.|+..+...+.. .....+.+.+. |.+++.|.|+|+|.|..|.
T Consensus 21 ~P~~v~~~~-~~~si~l~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~-~~~~~~~~~~~-L~~~t~Y~~~V~A~n~~G~ 97 (117)
T 1wj3_A 21 PPGNVVWNA-TDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQV-LNTNKTSAELV-LPIKEDYIIEVKATTDGGD 97 (117)
T ss_dssp CCCSCBCCE-ETTEEEEECCCCCCCSSSCCEEEEEEEEEESSCSSCEE-EEESSSEEEEE-CCCSSCEEEEEEEEESSCC
T ss_pred CCccEEEEE-eCCEEEEEEcCCCccccCCceeEEEEEEEECCCCCCeE-EeCCCcEEEEE-CCCCCEEEEEEEEECCCcc
Confidence 455566666 88899999999842 23345999999998766554432 22334678888 9999999999999999999
Q ss_pred CCCccccceEEe
Q psy7040 136 SEPLETFSSIIA 147 (716)
Q Consensus 136 ~~~s~~~~~~~~ 147 (716)
+.++......+.
T Consensus 98 Gp~S~~v~~~T~ 109 (117)
T 1wj3_A 98 GTSSEQIRIPRI 109 (117)
T ss_dssp CCBCCCEEECCC
T ss_pred CCCCCCEEEEcC
Confidence 998866554443
No 397
>2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1
Probab=98.93 E-value=9.9e-08 Score=88.22 Aligned_cols=183 Identities=11% Similarity=0.159 Sum_probs=120.0
Q ss_pred CCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeC--CCCCeEEccc---cCcccceEEE--cCCCCCCeEEEE
Q psy7040 225 PPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDE--ATGRWTPAGE---TEGPVTGLEV--EGLIPNHKYKFR 297 (716)
Q Consensus 225 ~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~--~~~~~~~~~~---~~~~~~~~~i--~~L~p~~~y~~~ 297 (716)
+|.+ +.+.......++.+|.+... . ....|.+.+.-. ....|..|.. ..+....+.+ ..+.....|.+.
T Consensus 39 ~~~n-l~C~~~~~~~l~CtW~~g~~--~-~~t~y~l~y~~~~~~~~~~~~C~~y~~~~g~~~~C~f~~~~~~~~~~y~i~ 114 (247)
T 2erj_C 39 PLPE-VQCFVFNVEYMNCTWQSSSE--P-QPTNLTLHYWYKNSDNDKVQKCSHYLFSEEITSGCQLQKKEIHLYQTFVVQ 114 (247)
T ss_dssp CCCC-CEEEEETTSEEEEECCTTSS--S-SCCCCEEEEEESSSSCCCCEECCSEEESSSSEEEEEEEGGGCCTTSCEEEE
T ss_pred CCCC-CEEEECCCCEEEEEEcCCCC--C-CCeeEEEEEEECCCCCCcceeCCCccccCCcceEEEeCCCCcceeeEEEEE
Confidence 4555 78888788899999996431 1 236777776433 2245666643 1222334444 444556677777
Q ss_pred EEEEcCCCCCCCCcccceEEecCCCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeee
Q psy7040 298 VRAVNKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQT 377 (716)
Q Consensus 298 v~a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~ 377 (716)
|.+ ..|..... . ..........|.+|.++.+.......+.|+|.+|... ....|.|+|+...+..|.....
T Consensus 115 V~~--~~g~~~s~-~--~~~~~~~iVkP~PP~nl~v~~~~~~~l~l~W~~P~~~---~~L~Yevry~~~~~~~W~~~~~- 185 (247)
T 2erj_C 115 LQD--PREPRRQA-T--QMLKLQNLVIPWAPENLTLHKLSESQLELNWNNRFLN---HCLEHLVQYRTDWDHSWTEQSV- 185 (247)
T ss_dssp EEC--SSCTTCEE-E--EEECGGGSEECCCCEEEEEEESSSSCEEEEEECSSCC---TTEEEEEEEECSSCSSCEEEEE-
T ss_pred EEE--CCCccccc-e--EEEchhHeEEeCCCCeEEEEECCCCcEEEEECCCCCC---CcEEEEEEEeeCCCCCCEEEec-
Confidence 753 33322111 1 1111112235889999999877778999999997531 3468999999877678876542
Q ss_pred cCCCCeEEecCCCCCCeEEEEEEEEeCC---CCCCCCCCCCceEeec
Q psy7040 378 EGDTPKGKVLDLIEGNQYEFRVLAVNKG---GPGEPSDPTAPHIARA 421 (716)
Q Consensus 378 ~~~~~~~~i~~l~~~~~Y~~~v~a~n~~---g~~~~s~~~~~~~~~~ 421 (716)
.....+.|.+|.+++.|.|+|+|.... +.|.+|+.+.......
T Consensus 186 -~~~~~~~l~~L~p~~~Y~vqVR~k~~~~~~~~g~WSeWS~~~~~~t 231 (247)
T 2erj_C 186 -DYRHKFSLPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSHPIHWGS 231 (247)
T ss_dssp -CSSCEEEESCCCTTSCEEEEEEEEECSSSCCCCCCCCCCCCEEECC
T ss_pred -CCceEEEecCCCCCCEEEEEEEEEeCCCCCCCCccCCCCcCEEEEC
Confidence 356789999999999999999999865 3567777777665543
No 398
>2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.93 E-value=5e-09 Score=86.05 Aligned_cols=81 Identities=21% Similarity=0.336 Sum_probs=66.0
Q ss_pred CCCCCCC-CcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeec-----------CCCceEEEeeecCCCCeEEecCCC
Q psy7040 323 NQPGKPG-TPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEK-----------YSPIWEKCAQTEGDTPKGKVLDLI 390 (716)
Q Consensus 323 ~~p~~p~-~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~-----------~~~~~~~~~~~~~~~~~~~i~~l~ 390 (716)
.+|.+|. ++.+...+.+++.|+|.+|..++ +.+|.+.|+.. ....|..... ...+++++.+|.
T Consensus 14 ~~P~~P~~~~~~~~~~~~sv~L~W~~p~~~g---~~~Y~~~Y~~~~~~~~~~~~~~~~~~w~~~~~--~~~~~~~v~gL~ 88 (127)
T 2dmk_A 14 TAPNPPSIREELCTASHDTITVHWISDDEFS---ISSYELQYTIFTGQANFISLYNSVDSWMIVPN--IKQNHYTVHGLQ 88 (127)
T ss_dssp SSCCCCEEEEEEEEEETTEEEEEEECSCCSS---EEEEEEEEEEESCCSCHHHHHHTGGGSEEEEE--ECSSEEEEESCC
T ss_pred CCCcCCCCCCEEEeeeCCEEEEEECCCCCCC---ccceEEEEEEecccccccccccCCCCcEEeec--ccCCeEEECCCC
Confidence 6788998 89999999999999999987543 77888888751 1245765443 457889999999
Q ss_pred CCCeEEEEEEEEeCCCCC
Q psy7040 391 EGNQYEFRVLAVNKGGPG 408 (716)
Q Consensus 391 ~~~~Y~~~v~a~n~~g~~ 408 (716)
|++.|.|+|+|.|..|.+
T Consensus 89 p~t~Y~frV~A~N~~G~~ 106 (127)
T 2dmk_A 89 SGTRYIFIVKAINQAGSR 106 (127)
T ss_dssp SSCEEEEEEEEEESSCEE
T ss_pred CCCEEEEEEEEEeCCCCC
Confidence 999999999999999983
No 399
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=98.92 E-value=1e-09 Score=101.42 Aligned_cols=127 Identities=12% Similarity=0.073 Sum_probs=81.2
Q ss_pred eEEEEcCCCCCCeEEEEEEEEcCCCCCccceeeeccCCCCCCccceeeccceeEEEEEEeeEEEEeeeeccCc-ee----
Q psy7040 570 TKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTDKPSAPEGPIQWLLTLTDVTWEISNYLQELHSSLMPI-SL---- 644 (716)
Q Consensus 570 ~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~~~~v~~~p~~~~~~~~~~~~~v~l~w~i~~y~v~~~~~~~~~-~~---- 644 (716)
..+.|.+++..+.+.|+|.+.|. +.......+.|..++..|. +.......+. .|-.+ .|.|.+ .|
T Consensus 72 ~sL~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~V~~~~~~p~-i~~~~~~~v~-----~G~~~---~l~C~~~~g~P~~ 141 (222)
T 4i0k_A 72 ASLRLQRVRVTDEGSYTCFVSIQ-DFDSAAVSLQVAAPYSKPS-MTLEPNKDLR-----PGNMV---TITCSSYQGYPEA 141 (222)
T ss_dssp CCEEECSCCGGGCSCEEEEEEEC-CCCCCCCCCCCCBCCCCCE-EECCC----------CCSEE---EEEEEEEEEBSCC
T ss_pred EEEEECCcccccCEEEEEEEEeC-CCceEEEEEEEEcCCCCCc-EEeCCCceec-----CCceE---EEEEecccccCCC
Confidence 78999999999999999999985 3344444444655555554 3221111110 11111 256666 33
Q ss_pred eEEEEe-CCeEeeec--------ccceeeEEEEccCCCCCcEEEEEEEEcCCCCceeeEEEEEecCCCCCC
Q psy7040 645 ESQYLM-NDKRVTID--------NVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTDKPSAPE 706 (716)
Q Consensus 645 ~~~W~~-~~~~~~~~--------~~~~~~~~~i~~l~~~~~y~y~~~a~n~~G~~~~s~~l~v~~~p~~p~ 706 (716)
.+.|++ ++..+... ..+....+.|.++...|.|.|+|.|.|..|....+..|.|..+|-...
T Consensus 142 ~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~ 212 (222)
T 4i0k_A 142 EVFWKDGQGVPLTGNVTTSQMANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITGQPLTFP 212 (222)
T ss_dssp EEEEECTTSCBCCSEEEEEEEECTTSCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCC------
T ss_pred eEEEEcCCCccCCCCcceeEEcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEEEEEEeCCccccC
Confidence 899999 55544332 111124478999999999999999999999999999999998776543
No 400
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=98.92 E-value=1.3e-08 Score=78.10 Aligned_cols=72 Identities=19% Similarity=0.351 Sum_probs=64.8
Q ss_pred ccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcC
Q psy7040 432 QLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNS 504 (716)
Q Consensus 432 ~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~ 504 (716)
.+.++.+.+|+.+.|.|.+.+ +.+.+.|++++..+..+.++.+..++....|.|.++.++|.|.|+|.|.|.
T Consensus 11 ~~~~~~v~~G~~v~l~C~v~~-~~~~v~W~k~g~~i~~~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a~n~ 82 (93)
T 1waa_A 11 PLYGVEVFVGETAHFEIELSE-PDVHGQWKLKGQPLAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAANT 82 (93)
T ss_dssp CCCCEEEETTSCEEEEEEESS-SSCCCEEEETTEECCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEETTE
T ss_pred cCcceEEeCCCCEEEEEEECC-CCCeEEEEECCEECcCCCCEEEEEECCEEEEEECCCChhhCEEEEEEECCC
Confidence 355788999999999999986 457899999999998888999888888889999999999999999999884
No 401
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=98.92 E-value=4.4e-09 Score=100.04 Aligned_cols=192 Identities=14% Similarity=0.065 Sum_probs=112.8
Q ss_pred CCCCeEEEEEEEEcCCCCCCCCcccceEEecCCCCCCC-CCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecC
Q psy7040 289 IPNHKYKFRVRAVNKQGKSEPLTTTASIEAKNPFNQPG-KPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKY 367 (716)
Q Consensus 289 ~p~~~y~~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~ 367 (716)
.....|.|+|.|.|..|.... ...+.+.... .|. .+....+ ..+..+.|.|... + .. .+.| .+
T Consensus 69 ~d~g~g~Y~C~a~n~~~~~~~---~~~l~V~~~p-~p~~~~~~~~v--~~G~~v~l~C~~~--p----~~--~i~W--~g 132 (265)
T 2oz4_A 69 EDEGTQRLTCAVILGNQSQET---LQTVTIYSFP-APNVILTKPEV--SEGTEVTVKCEAH--P----RA--KVTL--NG 132 (265)
T ss_dssp GGCEEEEEEEEEEETTEEEEE---EEEEEEECCC-CCEEEESCSEE--ETTCEEEEEEECC--T----TS--EEEE--SS
T ss_pred ccCCcceEEEEEecCCCCcEE---EEEEEEeCCC-CceeecCCcee--cCCCcEEEEEEcc--C----CC--EEEE--CC
Confidence 334455799999998775321 1122222110 010 1122222 2367788888873 1 11 2334 22
Q ss_pred CCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEEeCC-CCCCCCCCCCceEeecCCCCCccccc-ccccEEEecCCeEE
Q psy7040 368 SPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKG-GPGEPSDPTAPHIARAKKVSPYINRD-QLSDIKVRAGSNFE 445 (716)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~-g~~~~s~~~~~~~~~~~~~~P~~~~~-~~~~~~~~~g~~~~ 445 (716)
... ........+.+......+...|+|.|.|.. |............+ ..+|.+... .+....+.+|+.+.
T Consensus 133 -~~~----~~~~~~~~l~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V---~~~p~~~~~~~p~~~~v~~g~~~~ 204 (265)
T 2oz4_A 133 -VPA----QPLGPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRV---LYGPRLDERDCPGNWTWPENSQQT 204 (265)
T ss_dssp -CSS----SCCSSEECCEEECCGGGTTEEEEEEEEEECSSSEEEEEEEEEEEE---EEEEECCGGGSCSEEEEETTCEEC
T ss_pred -EEc----cCCCCcEEEEEccccccCCceEEEEEEcCCCCCcccccccEEEEE---EeCCccccccCCCccEEcCCCeEE
Confidence 111 111233456677787888888999998644 54321101111111 123333222 23467889999999
Q ss_pred EEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEEEEEEE
Q psy7040 446 FDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVL 517 (716)
Q Consensus 446 ~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v~ 517 (716)
|.|.+.+.|.+.+.|++++...... + .+ ..+...|.|.|+|.|.|..|....++.+.|.
T Consensus 205 l~C~~~g~P~p~i~W~~~~~~~~~~--------g---~~--~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 263 (265)
T 2oz4_A 205 PMCQAWGNPLPELKCLKDGTFPLPI--------G---ES--VTVTRDLEGTYLCRARSTQGEVTREVTVNVL 263 (265)
T ss_dssp CCCCCEEESCCEEEEEETTTEECCT--------T---SC--EECCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEeECccCCCCeEEEEECCcccCCC--------C---cE--EEeehhhCeEEEEEEECCCCcEEEEEEEEEe
Confidence 9999999999999999998732211 1 11 1377799999999999999998888877764
No 402
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=98.92 E-value=1.2e-08 Score=93.33 Aligned_cols=118 Identities=13% Similarity=0.124 Sum_probs=74.9
Q ss_pred eEEEEcCCCCCCeEEEEEEEEcCCCCCcc-ceeeeccCCCCCCcccee-------eccceeEEEEEEeeEEEEeeeeccC
Q psy7040 570 TKITIRPLQRSDTAQYTVTATNSQGKDQV-FIEVVVTDKPSAPEGPIQ-------WLLTLTDVTWEISNYLQELHSSLMP 641 (716)
Q Consensus 570 ~~~~i~~L~~~~~y~~~v~a~n~~G~~~~-s~~~~v~~~p~~~~~~~~-------~~~~~v~l~w~i~~y~v~~~~~~~~ 641 (716)
..+.|.+++..+.+.|+|.|.|..|.... ...+.|...+..|. +.. +.+..+.|.+.+.++.-
T Consensus 71 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~-v~~~~~~~~~~~g~~~~l~C~~~g~~p-------- 141 (213)
T 3d9a_L 71 FTLSINSVETEDFGMYFCQQSNSWPYTFGGGTKLEIKRADAAPT-VSIFPPSSEQLTSGGASVVCFLNNFYP-------- 141 (213)
T ss_dssp EEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECCCCBCCE-EEEECCCHHHHHTTEEEEEEEEEEEBS--------
T ss_pred EEEEECCCChhhCEEEEEeeecCCcceeCCCEEEEEecCCCCce-eEeECCChhhcCCCcEEEEEEEeeecC--------
Confidence 68999999999999999999998763221 12334444333333 222 12345554443222100
Q ss_pred ceeeEEEEeCCeEeeec-c--------cc----eeeEEEEccCCCCCcEEEEEEEEcCCCCceeeEEE
Q psy7040 642 ISLESQYLMNDKRVTID-N--------VD----YFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEV 696 (716)
Q Consensus 642 ~~~~~~W~~~~~~~~~~-~--------~~----~~~~~~i~~l~~~~~y~y~~~a~n~~G~~~~s~~l 696 (716)
..-.+.|+++|..+... . .+ ....|.|.++..+|.|.|+|.|.|..........+
T Consensus 142 ~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~i 209 (213)
T 3d9a_L 142 KDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSF 209 (213)
T ss_dssp SCCEEEEEETTEEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSSCEEEEE
T ss_pred CceEEEEEcCCCcCcceeeecCCCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCCCceEEEe
Confidence 00058999999987644 1 01 12489999999999999999999987765444333
No 403
>1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=98.92 E-value=4.7e-09 Score=84.30 Aligned_cols=85 Identities=14% Similarity=0.227 Sum_probs=66.9
Q ss_pred EEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCC----CcEEE--ecccCCCeEEecCCCCCcEEEEEEEEEecCccCC
Q psy7040 64 SNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPET----GVWIP--VGKTREPEMDVTGLTPGHEYKFRVKALNKEGESE 137 (716)
Q Consensus 64 ~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~----~~~~~--~~~~~~~~~~i~~L~~~~~y~~~v~a~~~~g~~~ 137 (716)
...+.++|.|+|+++. ....+.+|+|.|+..+. ..|.. +......++.|.+|+|++.|.|+|+|.|..|.+.
T Consensus 25 ~a~sstsi~vsW~~~~--~~g~i~gY~V~Y~~~~~~~~~~~~~~~~v~~~~~~~~~l~~L~p~T~Y~~~V~A~n~~G~Gp 102 (120)
T 1ujt_A 25 VVLTPTTVQVTWTVDR--QPQFIQGYRVMYRQTSGLQATSSWQNLDAKVPTERSAVLVNLKKGVTYEIKVRPYFNEFQGM 102 (120)
T ss_dssp CCCBTTEEEEEEEESS--CCSSCCEEEEEEEESSSSSTTTCCEEEECCCTTCCEEEEESCCSSEEEEEEEEEESSSCCCC
T ss_pred EEccCceEEEEEccCC--CCCcEeeEEEEEEECCCCCCCCccEEEEecCCCcCEEEECCCCCCCEEEEEEEEECCCccCC
Confidence 4557899999999653 33459999999987764 45653 2233357999999999999999999999999999
Q ss_pred CccccceEEecCC
Q psy7040 138 PLETFSSIIARDP 150 (716)
Q Consensus 138 ~s~~~~~~~~~~p 150 (716)
+|......+..+.
T Consensus 103 ~S~~v~~~T~e~v 115 (120)
T 1ujt_A 103 DSESKTVRTTEES 115 (120)
T ss_dssp CCCCEEEEECSSC
T ss_pred CCCCEEEECCCCC
Confidence 9988777776543
No 404
>1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1
Probab=98.91 E-value=7.2e-09 Score=78.80 Aligned_cols=78 Identities=23% Similarity=0.360 Sum_probs=58.6
Q ss_pred CCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCCcEEEecccCCCeEEecCCCCCcEEEEEEEEEecCcc-
Q psy7040 57 PEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETGVWIPVGKTREPEMDVTGLTPGHEYKFRVKALNKEGE- 135 (716)
Q Consensus 57 p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~~~~g~- 135 (716)
+|..|.+...+.+++.|+|+++..+ + .+.+|+|++. +.. +.....+++.+.+|.+++.|.|+|+|.|..|.
T Consensus 6 ~P~~l~~~~~~~~sv~L~W~~~~~~-~-~i~~Y~v~~~---~~~---~~~~~~~~~~~~~L~~~t~Y~~~V~A~n~~G~~ 77 (88)
T 1k85_A 6 APTNLASTAQTTSSITLSWTASTDN-V-GVTGYDVYNG---TAL---ATTVTGTTATISGLAADTSYTFTVKAKDAAGNV 77 (88)
T ss_dssp CCEEEEEEEECSSCEEEEEECCSCC-S-SEEEEEEEES---SSE---EEEESSSEEEECCCCSSCEEEEEEEEEETTTEE
T ss_pred CCCccEEEeccCCEEEEEECCCCCC-C-CccEEEEEEC---CEE---EeecCCCEEEeCCCCCCCEEEEEEEEEeCCCCc
Confidence 4444777788899999999998643 3 3999999842 221 22233589999999999999999999999997
Q ss_pred CCCcccc
Q psy7040 136 SEPLETF 142 (716)
Q Consensus 136 ~~~s~~~ 142 (716)
+.++...
T Consensus 78 s~~S~~v 84 (88)
T 1k85_A 78 SAASNAV 84 (88)
T ss_dssp CCCCCCE
T ss_pred CCCCCCE
Confidence 5555443
No 405
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=98.91 E-value=1.6e-08 Score=90.81 Aligned_cols=130 Identities=22% Similarity=0.320 Sum_probs=98.0
Q ss_pred CCCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccCCCeE
Q psy7040 379 GDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTK 458 (716)
Q Consensus 379 ~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~ 458 (716)
.....+.|.++...+.+.|+|.+.|..|...... ...+ ..+|.+.. .....+..|..+.|.|.+.+.|.+.+
T Consensus 55 ~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~---~l~V---~~~p~~~~--~~~~~~~~g~~v~l~C~~~~~p~~~v 126 (192)
T 2va4_A 55 GSNTELTVRNIINSDGGPYVCRATNKAGEDEKQA---FLQV---FVQPHIIQ--LKNETTYENGQVTLVCDAEGEPIPEI 126 (192)
T ss_dssp TTTTEEEECSCCGGGCEEEEEEEEETTEEEEEEE---EEEE---EEEEEEEE--ECCEEECTTSEEEEEEEEEEESCCEE
T ss_pred CCeeEEEEecCChhcCcEEEEEEEccccccceEE---EEEE---EccCcccc--cCcceEEeCCeEEEEEEecCCCCCcE
Confidence 3456799999999999999999999876543111 1111 11333321 23456778999999999999999999
Q ss_pred EEEeC--CeEecc-----CCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEEEEEE
Q psy7040 459 EWLCN--DITIIS-----KDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTV 516 (716)
Q Consensus 459 ~W~~~--~~~~~~-----~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v 516 (716)
.|+++ +..+.. ..++.+........|.|.++...|.|.|+|.|.|..|....++.+.|
T Consensus 127 ~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 191 (192)
T 2va4_A 127 TWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDI 191 (192)
T ss_dssp EEEETTTTEEECTTCBCTTSCEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred EEEeCCCCceeeccccccCCcEEEeeccCceEEEEecCCcccCEEEEEEEEecCCceEEEEEEEe
Confidence 99998 555443 34566666666789999999999999999999999999888877765
No 406
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=98.91 E-value=6.8e-09 Score=93.50 Aligned_cols=151 Identities=9% Similarity=0.022 Sum_probs=95.6
Q ss_pred EEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCcee--eEEEE
Q psy7040 437 KVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDK--GTAKV 514 (716)
Q Consensus 437 ~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~--~s~~~ 514 (716)
.+.+|+.+.|.|.+.+.|. .+.|++++..+..... ..........|.|.++.+.|.|.|+|.|.|..|... ....+
T Consensus 15 ~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~-~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l 92 (196)
T 2d3v_A 15 VISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDTQ-NPLEPKNKARFSIPSMTEHHAGRYRCYYYSPAGWSEPSDPLEL 92 (196)
T ss_dssp EEETTCCEEEEEECCTTCC-EEEEEETTCSSCSEEE-CCCSSTTEEEEEESSCCGGGCEEEEEEEEETTEECBCCCCEEE
T ss_pred cccCCCeEEEEEeCCCCCc-EEEEEECCCCCCcccc-cccCCccccEEEeccCChhHCeEEEEEEeCCCCcCCcCccEEE
Confidence 6889999999999988776 9999999876532111 111234567899999999999999999999877543 33455
Q ss_pred EEEE----EEEEEeC--CCCCCCCceeeEEEEEEecCCCceeeeEEEccceeeeec-------cccceeEEEEcCCCCCC
Q psy7040 515 TVLG----CSLKWNP--PEDDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTID-------NVDYFTKITIRPLQRSD 581 (716)
Q Consensus 515 ~v~~----v~l~W~~--p~~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~-------~~~~~~~~~i~~L~~~~ 581 (716)
.+.. ..+.=.+ ....+......|.+ ...+ +.+.|++.+....... .......+.|.++...+
T Consensus 93 ~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~----~~~p-~~~~W~k~g~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 167 (196)
T 2d3v_A 93 VVTGFYNKPTLSALPSPVVTSGENVTLQCGS----RLRF-DRFILTEEGDHKLSWTLDSQLTPSGQFQALFPVGPVTPSH 167 (196)
T ss_dssp EEECSSCCCEEEC-----------CEEEEEE----SSCC-SEEEEEEC---CCEEEEECEECTTSCEEEEEECCCCBTTB
T ss_pred EecCCCCCCeEEccCCccccCCCcEEEEEEc----CCCC-CEEEEEccCCcccccccccccccCCCceeEEEeeecCccc
Confidence 5441 1121111 01112222233333 2333 5599999876542111 11123789999999999
Q ss_pred eEEEEEEEEcCCC
Q psy7040 582 TAQYTVTATNSQG 594 (716)
Q Consensus 582 ~y~~~v~a~n~~G 594 (716)
.+.|+|.|.|..+
T Consensus 168 ~G~Y~C~a~n~~~ 180 (196)
T 2d3v_A 168 RWMLRCYGSRRHI 180 (196)
T ss_dssp CEEEEEEEEETTE
T ss_pred CeeEEEEEEccCC
Confidence 9999999999765
No 407
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=98.90 E-value=1.2e-08 Score=81.23 Aligned_cols=92 Identities=25% Similarity=0.393 Sum_probs=78.5
Q ss_pred CCcccccccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcC
Q psy7040 425 SPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNS 504 (716)
Q Consensus 425 ~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~ 504 (716)
+|.+. ..+..+.+..|..+.|.|.+.+.|.+.+.|++++..+....++.+...+....|.|.++...|.|.|+|.|.|.
T Consensus 13 ~P~~~-~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~ 91 (107)
T 3irg_B 13 PPCFL-RFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNA 91 (107)
T ss_dssp EEEEE-ECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCeeE-cCCccEEEeCCCeEEEEEEEeecCCCEEEEEECCeECCCCCcEEEEeCCCEEEEEEccCCHHhCEEEEEEEEcC
Confidence 44443 23456889999999999999999999999999999998888888777777789999999999999999999999
Q ss_pred CCceeeEEEEEEE
Q psy7040 505 WGTDKGTAKVTVL 517 (716)
Q Consensus 505 ~g~~~~s~~~~v~ 517 (716)
.|.......+.+.
T Consensus 92 ~g~~~~~~~l~V~ 104 (107)
T 3irg_B 92 AGEAYAAAAVTVL 104 (107)
T ss_dssp TEEEEEEEEEEEE
T ss_pred CCcEEEEEEEEEE
Confidence 9988777766654
No 408
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=98.90 E-value=3.3e-09 Score=105.34 Aligned_cols=168 Identities=14% Similarity=0.142 Sum_probs=117.6
Q ss_pred ccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCce-eEEEEEEcCCCceeeEE
Q psy7040 434 SDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSG-IYTLAVKNSWGTDKGTA 512 (716)
Q Consensus 434 ~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~-~y~~~a~n~~g~~~~s~ 512 (716)
..+.+.+|+.+.+.|.+.+.|.+.+.|++++..+..... .........|.|.++...|.| .|+|.|.|..|....++
T Consensus 166 ~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~--~~~~~~~~~L~i~~v~~~D~G~~Y~C~a~n~~g~~~~~~ 243 (347)
T 2ifg_A 166 PNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVM--KSGGLPSLGLTLANVTSDLNRKNVTCWAENDVGRAEVSV 243 (347)
T ss_dssp CSSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEEC--CCCCSSEEEEEEESCCSTTTTCCEEECCEETTEECCEEE
T ss_pred CceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeecccc--cceecccceEEEeeCChHHCCCeEEEEEEcCCCCEEEEE
Confidence 456788999999999999999999999999865432111 112335678999999999999 99999999999887766
Q ss_pred EEEEE-EEEEEEeCCCCCCCCceeeEEEEEEecCCCceeeeEEEccceeeeecc------------ccceeEEEEcCCCC
Q psy7040 513 KVTVL-GCSLKWNPPEDDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDN------------VDYFTKITIRPLQR 579 (716)
Q Consensus 513 ~~~v~-~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~------------~~~~~~~~i~~L~~ 579 (716)
.+.+. ...+.-..+ ..+......|.+... +.|.+.|++.+........ ......+.|.++..
T Consensus 244 ~l~V~~~P~i~~~~~-~~g~~v~l~C~~~g~----P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~ 318 (347)
T 2ifg_A 244 QVNVSFPASVQLHTA-VEMHHWCIPFSVDGQ----PAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTH 318 (347)
T ss_dssp CCCCBEEEEEEECCC-EESSSEEEEEEEEEE----SCCEEEEEETTEECCCCSSEEEEECCCCTTCCCEEEEEEESSCCG
T ss_pred EEEEcCCCeeeeccC-ccCceEEEEEEeeec----CCCcEEEEeCCEECCCCcceeeEEEeecCCCcccceEEEECCCCc
Confidence 66655 222222222 222333344555444 3445999988765432111 01245699999999
Q ss_pred CCeEEEEEEEEcCCCCCccceeeeccCCC
Q psy7040 580 SDTAQYTVTATNSQGKDQVFIEVVVTDKP 608 (716)
Q Consensus 580 ~~~y~~~v~a~n~~G~~~~s~~~~v~~~p 608 (716)
.+.+.|+|.|.|..|....+..+.|..+|
T Consensus 319 ~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P 347 (347)
T 2ifg_A 319 VNNGNYTLLAANPFGQASASIMAAFMDNP 347 (347)
T ss_dssp GGCEEEEEEEEETTEEEEEEEEECSCCCC
T ss_pred ccCceEEEEEecCCCceeeEEEEEecCCC
Confidence 99999999999999987777766676655
No 409
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=98.89 E-value=1.3e-08 Score=89.17 Aligned_cols=59 Identities=20% Similarity=0.254 Sum_probs=47.1
Q ss_pred cEEEecCCeEEEEEEEeccC-CCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEc
Q psy7040 435 DIKVRAGSNFEFDINVIGEP-IPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKN 503 (716)
Q Consensus 435 ~~~~~~g~~~~~~~~v~~~p-~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n 503 (716)
.+.+..|+.+.|.|.+.+.| .+.+.|++++..+.... ..+.+.++...|.|.|+|.+.|
T Consensus 13 ~~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~~~----------~~~~~~~~~~~d~G~Y~C~~~~ 72 (170)
T 3ry4_A 13 WINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTHT----------QPSYRFKANNNDSGEYTCQTGQ 72 (170)
T ss_dssp CSEEETTCEEEEEEESCCCSSSSCEEEEETTEECTTCC----------SSEEEEECCGGGCEEEEEEETT
T ss_pred CeEEECCCcEEEEEEecCCCCcceEEEEECCeEcccCc----------cceEEEecccccCeEEEEEEeC
Confidence 35688999999999999887 67899999998875432 2345567888999999998864
No 410
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=98.89 E-value=1.7e-08 Score=79.08 Aligned_cols=85 Identities=32% Similarity=0.572 Sum_probs=71.5
Q ss_pred cccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCc-EEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeE
Q psy7040 433 LSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDR-FKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGT 511 (716)
Q Consensus 433 ~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~-~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s 511 (716)
+....+..|..+.|.|.+.+.|.+.+.|++++..+..... +.+...+....|.|.++.+.|.|.|+|.|.|..|....+
T Consensus 12 ~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~g~~~~~ 91 (99)
T 1u2h_A 12 LMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAVNEYGARQCE 91 (99)
T ss_dssp CCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCBTTEEEEECGGGEEEEEESSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CCceEecCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCCEEEEEEccCCcCCCEEEEEEEEECCCceeEE
Confidence 4457899999999999999999999999999998875544 444445556689999999999999999999999988877
Q ss_pred EEEEEE
Q psy7040 512 AKVTVL 517 (716)
Q Consensus 512 ~~~~v~ 517 (716)
..+.|.
T Consensus 92 ~~l~V~ 97 (99)
T 1u2h_A 92 ARLEVR 97 (99)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 776653
No 411
>2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=98.89 E-value=5e-09 Score=84.42 Aligned_cols=106 Identities=22% Similarity=0.363 Sum_probs=76.8
Q ss_pred cCCCCCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCCCCCeEEccccCcccceEEEcCCCCCCeEEEEEEE
Q psy7040 221 DKPSPPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEATGRWTPAGETEGPVTGLEVEGLIPNHKYKFRVRA 300 (716)
Q Consensus 221 ~~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a 300 (716)
..|.+|.+ |++.....+++.|+|.+|.. .+.+|.|.+...+... ... ........+.|.+|.|++.|.|+|.|
T Consensus 6 t~p~~P~~-l~~~~~t~~sv~lsW~~p~~----~i~~Y~v~y~~~~~~~-~~~-~v~~~~t~~~l~~L~P~t~Y~~~V~A 78 (115)
T 2cuh_A 6 SGPDGPTQ-LRALNLTEGFAVLHWKPPQN----PVDTYDIQVTAPGAPP-LQA-ETPGSAVDYPLHDLVLHTNYTATVRG 78 (115)
T ss_dssp CCCSSCEE-EECCCCSSSCEEEEEECCSS----CCSEEEEEEECSSSCC-EEE-EEETTCSEEEECSCCSSSEEEEEEEE
T ss_pred cCCCCCcc-eEEEeccCCeEEEEEECCCC----CccEEEEEEEcCCCCc-EEE-EECCCccEEEEeCCCCCCEEEEEEEE
Confidence 46788887 88888899999999998642 5889999997654322 211 22355789999999999999999999
Q ss_pred EcCCCCCCCCcccceEEecCCCCCCCCCCCcEEEeeeCCe
Q psy7040 301 VNKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDFDTDF 340 (716)
Q Consensus 301 ~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~ 340 (716)
.+..|.+.+.. ..+.+ .+.+|.++.+..++.++
T Consensus 79 ~~~~~~s~~~~----~~~~T---~~~~P~~l~~~~vt~~s 111 (115)
T 2cuh_A 79 LRGPNLTSPAS----ITFTT---GLEAPRDLEAKEVTPSG 111 (115)
T ss_dssp EETTEECCCEE----EEEES---CCCCTTTSSSCCCCCCC
T ss_pred EeCCCcCCCEE----EEEEe---CCCCCCCcEEEEecCCc
Confidence 99877665433 22332 25567888777665543
No 412
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=98.88 E-value=1.4e-08 Score=79.67 Aligned_cols=85 Identities=27% Similarity=0.384 Sum_probs=71.2
Q ss_pred cccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcE-EEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeE
Q psy7040 433 LSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRF-KIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGT 511 (716)
Q Consensus 433 ~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~-~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s 511 (716)
+..+.+..|..+.|.|.+.+.|.+.+.|++++..+...... ..........|.|.++...|.|.|+|.|.|..|....+
T Consensus 12 p~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~ 91 (100)
T 2kdg_A 12 PENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVAKNRAGEATFT 91 (100)
T ss_dssp CCCEEEETTCCEEEEEECEEESCCEEEEEETTEEECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CCCEEecCCCEEEEEEEEEeeCCCEEEEEECCEECcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEEEEcCCCeEEEE
Confidence 45678999999999999999999999999999988765443 33344455789999999999999999999999998777
Q ss_pred EEEEEE
Q psy7040 512 AKVTVL 517 (716)
Q Consensus 512 ~~~~v~ 517 (716)
+.+.+.
T Consensus 92 ~~l~V~ 97 (100)
T 2kdg_A 92 VQLDVL 97 (100)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 777654
No 413
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=98.88 E-value=3.9e-09 Score=96.77 Aligned_cols=120 Identities=16% Similarity=0.127 Sum_probs=87.5
Q ss_pred eeEEEEcCCCCCCeEEEEEEEEcCCCCCccceeeeccCCCCCCccce---eeccceeEEEEEEeeEEEEeeeeccCc-ee
Q psy7040 569 FTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTDKPSAPEGPI---QWLLTLTDVTWEISNYLQELHSSLMPI-SL 644 (716)
Q Consensus 569 ~~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~~~~v~~~p~~~~~~~---~~~~~~v~l~w~i~~y~v~~~~~~~~~-~~ 644 (716)
...+.|.+++..+.+.|+|.|.|..|.......+.|..+|..+.... ...+..+. |.|.+ .|
T Consensus 83 ~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~--------------l~C~~~~g 148 (214)
T 3jz7_A 83 DASINVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSGTRCFVDGSEEIGNDFK--------------LKCEPKEG 148 (214)
T ss_dssp BCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCBSCEEEEESCCBTTCCEE--------------EEEECSBC
T ss_pred cccEEEccCChhhCeEEEEEEEeCCCccccEEEEEEEcCCCCceeeeecceecCCcEE--------------EEecCCCC
Confidence 37799999999999999999999888665555566766666544111 11123333 66666 44
Q ss_pred ----eEEEEeCC--eEeeec--ccceeeEEEEccCCCCCcEEEEEEEEcCCCCceeeEEEEEecCC
Q psy7040 645 ----ESQYLMND--KRVTID--NVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTDKP 702 (716)
Q Consensus 645 ----~~~W~~~~--~~~~~~--~~~~~~~~~i~~l~~~~~y~y~~~a~n~~G~~~~s~~l~v~~~p 702 (716)
.+.|++++ ..+... .......|.|.++...|+|.|+|.|.|..|....+..|.|..||
T Consensus 149 ~p~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~P~ 214 (214)
T 3jz7_A 149 SLPLQFEWQKLSDSQTMPTPWLAEMTSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVVPPS 214 (214)
T ss_dssp CSSCEEEEEECSTTCCCCGGGGGGTTSSEEEECSCCGGGCEEEEEEEECSSCEEEEEEEECCBCCC
T ss_pred CCCCEEEEEECCCCCccCccceeccCCCEEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEEEeCCC
Confidence 89999953 443322 12233699999999999999999999999999999999888543
No 414
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.88 E-value=2.2e-07 Score=82.47 Aligned_cols=122 Identities=16% Similarity=0.212 Sum_probs=89.4
Q ss_pred eEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccC-CCeEEEE
Q psy7040 383 KGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEP-IPTKEWL 461 (716)
Q Consensus 383 ~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p-~~~~~W~ 461 (716)
.+.+. ...+...|+|.|.|.. + ......+ ..+|.+... .....+..|..+.|.|.+.+.| .+.+.|+
T Consensus 52 ~l~i~--~~~d~G~Y~C~~~n~~-----~-~~~~l~V---~~~P~~~~~-~~~~~~~~g~~~~l~C~~~g~p~~~~i~W~ 119 (184)
T 3b5h_A 52 EFKVD--SDDQWGEYSCVFLPEP-----M-GTANIQL---HGPPRVKAV-KSSEHINEGETAMLVCKSESVPPVTDWAWY 119 (184)
T ss_dssp EEEEC--GGGCCEEEEEEEESTT-----S-CEEEEEE---CCSCCCEES-CSEEEECTTSCEEEEEECCCSSCCCEEEEE
T ss_pred EEEEe--chhhCeEEEEEEECCc-----C-cEEEEEE---ecCCceeec-CCCcEEcCCCcEEEEEEECCCCCCCeEEEE
Confidence 45555 4667889999999721 1 1111112 235554432 2456788999999999999999 7999999
Q ss_pred e---CCeE-ecc--CCcEEEEeCCCeEEEEECCCC-CCCceeEEEEEEcCCCceeeEEEEEE
Q psy7040 462 C---NDIT-IIS--KDRFKIVNDDKSTKLKVFDSK-RGDSGIYTLAVKNSWGTDKGTAKVTV 516 (716)
Q Consensus 462 ~---~~~~-~~~--~~~~~~~~~~~~~~l~i~~l~-~~~~~~y~~~a~n~~g~~~~s~~~~v 516 (716)
+ ++.. +.. ..++.+...+....|.|.++. ..|.|.|+|.|.|..|....+..+.|
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~N~~g~~~~~~~l~V 181 (184)
T 3b5h_A 120 KITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRV 181 (184)
T ss_dssp ECCSSSCEECCTTGGGTEEEEEETTEEEEEECSCCTTTSSEEEEEEEEETTEEEEEEEEEEE
T ss_pred EcCCCCCEEeecCCCCEEEEEecCCeeEEEEeeccccccCceEEEEEEeCCCcceEEEEEEE
Confidence 9 4443 322 356777777778899999999 99999999999999999888777665
No 415
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.87 E-value=2.4e-09 Score=86.51 Aligned_cols=74 Identities=22% Similarity=0.305 Sum_probs=61.3
Q ss_pred eccCcee----eEEEEeCCeEeeec------ccceeeEEEEccCCCCCcEEEEEEEEcCCCCceeeEEEEEecCCCCCCC
Q psy7040 638 SLMPISL----ESQYLMNDKRVTID------NVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTDKPSAPEG 707 (716)
Q Consensus 638 ~~~~~~~----~~~W~~~~~~~~~~------~~~~~~~~~i~~l~~~~~y~y~~~a~n~~G~~~~s~~l~v~~~p~~p~~ 707 (716)
|.|.+.| .+.|++++..+... .......|.|.++...|+|.|+|.|.|..|....+..|.|..+|.+|..
T Consensus 27 l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~P~~ 106 (114)
T 2cqv_A 27 LFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLVENKLGSRQAQVNLTVVDKPDPPAG 106 (114)
T ss_dssp EEEEEESSSSCEEEEEESSSBCCCSSSEEEEECSSEEEEEETTCCTTTCEEEEEEEECSSCEEECCEEEEEECSCSCCCC
T ss_pred EEEEEEcCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhcCEEEEEEEEECCCcEEEEEEEEEECCCCCCCC
Confidence 5566655 89999999887654 1122468999999999999999999999999999999999999999987
Q ss_pred CeEE
Q psy7040 708 PIQI 711 (716)
Q Consensus 708 p~~~ 711 (716)
|..+
T Consensus 107 p~~~ 110 (114)
T 2cqv_A 107 TPSG 110 (114)
T ss_dssp CTTS
T ss_pred Cccc
Confidence 7543
No 416
>1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=98.86 E-value=1.3e-08 Score=80.84 Aligned_cols=94 Identities=17% Similarity=0.280 Sum_probs=74.5
Q ss_pred CCCCCCCCcEEEeee--CCeEEEEecCCCC--CCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEE
Q psy7040 323 NQPGKPGTPEIKDFD--TDFVELAWTPPEQ--NGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFR 398 (716)
Q Consensus 323 ~~p~~p~~~~~~~~~--~~~i~l~W~~p~~--~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~ 398 (716)
..|.+|.++.+.... .+.+.|+|.+|.. +.++.+..|.|+|+..+...|..... ...+++.|.+|.+++.|.|+
T Consensus 6 vkp~pP~~l~v~~~~~~~~~l~lsW~~P~~w~~~~~~~l~Y~v~y~~~~~~~w~~~~~--~~~~~~~l~~L~p~t~Y~~~ 83 (109)
T 1uc6_A 6 VKPDPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHVEL--SNGTAHTITDAYAGKEYIIQ 83 (109)
T ss_dssp CCCCCCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCCCEEE--SSCSEEEETTCCSSSCEEEE
T ss_pred EecCCCcceEEEEcCCCCCEEEEEECCCCCccCCCcEEEEEEEEEEECCCCCcEEEec--ccCCEEEEeCCCCCCEEEEE
Confidence 458889999888654 4789999999864 22336889999999887666764432 35689999999999999999
Q ss_pred EEEEeCCCCCCCCCCCCceEe
Q psy7040 399 VLAVNKGGPGEPSDPTAPHIA 419 (716)
Q Consensus 399 v~a~n~~g~~~~s~~~~~~~~ 419 (716)
|+|.+. |.|.+|+.+.....
T Consensus 84 VRa~~~-g~g~wS~WS~~~~~ 103 (109)
T 1uc6_A 84 VAAKDN-EIGTWSDWSVAAHA 103 (109)
T ss_dssp EECCBS-SSCCCCCCCEEEEE
T ss_pred EEEEeC-CCCCcCcCCCCeee
Confidence 999996 88888888766554
No 417
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=98.86 E-value=1.5e-07 Score=85.05 Aligned_cols=73 Identities=10% Similarity=0.085 Sum_probs=55.2
Q ss_pred cEEEecCCeEEEEEEEe----ccCCCeEEEEeCCeEecc------------CCcEEEEeCCCeEEEEECCCCCCCceeEE
Q psy7040 435 DIKVRAGSNFEFDINVI----GEPIPTKEWLCNDITIIS------------KDRFKIVNDDKSTKLKVFDSKRGDSGIYT 498 (716)
Q Consensus 435 ~~~~~~g~~~~~~~~v~----~~p~~~~~W~~~~~~~~~------------~~~~~~~~~~~~~~l~i~~l~~~~~~~y~ 498 (716)
.+.+..|+.+.|.|.+. +.|.+.+.|.+++..+.. ..+..+. ......|.|.++...|.|.|+
T Consensus 3 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~-~~~~~~L~I~~v~~~D~G~Y~ 81 (201)
T 1dr9_A 3 HVTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFD-ITNNLSIVILALRPSDEGTYE 81 (201)
T ss_dssp EEEEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEE-STTTTEEEECSCCGGGCEEEE
T ss_pred eEEEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEc-cCCCcEEEEecccchhCeEEE
Confidence 46788999999999985 457789999999876520 1122221 233568999999999999999
Q ss_pred EEEEcCCCce
Q psy7040 499 LAVKNSWGTD 508 (716)
Q Consensus 499 ~~a~n~~g~~ 508 (716)
|.|.|..|..
T Consensus 82 C~~~~~~g~~ 91 (201)
T 1dr9_A 82 CVVLKYEKDA 91 (201)
T ss_dssp EEEEECCTTS
T ss_pred EEEEcCCCCc
Confidence 9999987654
No 418
>2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=98.86 E-value=1.9e-08 Score=79.55 Aligned_cols=82 Identities=12% Similarity=0.251 Sum_probs=66.5
Q ss_pred CCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCC--------ceEEEeeecCCCCeEEecCCCCCCe
Q psy7040 323 NQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSP--------IWEKCAQTEGDTPKGKVLDLIEGNQ 394 (716)
Q Consensus 323 ~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~--------~~~~~~~~~~~~~~~~i~~l~~~~~ 394 (716)
..|.+|.+|.+..++.++++|+|.+|. +.+.+|+|.|...+.. ........+....+++|.+|.|++.
T Consensus 7 ~~pp~p~~L~v~~~T~~Si~LsW~~p~----g~v~~Y~i~y~~~~~~~~e~~~~~~~~~~~~v~~~~t~~~l~gL~PgT~ 82 (112)
T 2cui_A 7 GSRPRLSQLSVTDVTTSSLRLNWEAPP----GAFDSFLLRFGVPSPSTLEPHPRPLLQRELMVPGTRHSAVLRDLRSGTL 82 (112)
T ss_dssp CCCCCCCCCEEESCCSSCEEEECCCCT----TSCSEEEEEEECCCCSSSCCCSSCCCCEEEEEETTCCEEEECSCCTTCE
T ss_pred CCCCCCCceEEEeecCCeEEEEECCCC----CCccEEEEEEEeCCCCccccccccCcceEEEcCCCcCEEEeCCCCCCCE
Confidence 567789999999999999999999863 2588999999876532 0123344567788999999999999
Q ss_pred EEEEEEEEeCCCCC
Q psy7040 395 YEFRVLAVNKGGPG 408 (716)
Q Consensus 395 Y~~~v~a~n~~g~~ 408 (716)
|.|+|+|.+..+.+
T Consensus 83 Y~~~V~A~~~~~~s 96 (112)
T 2cui_A 83 YSLTLYGLRGPHKA 96 (112)
T ss_dssp EEEEEEEECSSSEE
T ss_pred EEEEEEEEECCccc
Confidence 99999999876654
No 419
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=98.86 E-value=2.4e-08 Score=91.21 Aligned_cols=170 Identities=12% Similarity=0.055 Sum_probs=104.0
Q ss_pred cccEEEecC--CeEEEEEEEeccCCCeEEEEeC---CeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCc
Q psy7040 433 LSDIKVRAG--SNFEFDINVIGEPIPTKEWLCN---DITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGT 507 (716)
Q Consensus 433 ~~~~~~~~g--~~~~~~~~v~~~p~~~~~W~~~---~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~ 507 (716)
+..+.+.+| +.+.|.|.+.+ |.+.+.|++. +..+.....+.... ...|.|.++...|.|.|+|.|.|..+.
T Consensus 14 p~~v~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~~~~~~~~~---~~~l~I~~v~~~D~G~Y~C~a~n~~~~ 89 (213)
T 2x1w_L 14 HGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGNRISWDS---KKGFTIPSYMISYAGMVFCEAKINDES 89 (213)
T ss_dssp CEEEEECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECCCSSSCEEET---TTEEEEEGGGTTTCSEEEEEEC----C
T ss_pred ceEEEEecCCCccEEEeeccCC-CCcEEEEEhhcCCCccccCCCcccccC---CccEEEccCChhcCceEEEEEEECCee
Confidence 356889999 99999999986 7789999884 55444443333222 236999999999999999999985443
Q ss_pred eee-EEEEEEE---EEEEEEeCCCC----CCCCceeeEEEEEEecCCCceeeeEEEccceeee------e-cc------c
Q psy7040 508 DKG-TAKVTVL---GCSLKWNPPED----DGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVT------I-DN------V 566 (716)
Q Consensus 508 ~~~-s~~~~v~---~v~l~W~~p~~----~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~------~-~~------~ 566 (716)
... ...+.+. ...+.-.++.. .+......|.+... ..+.+.+.|++.+..... . .. .
T Consensus 90 ~~s~~~~l~v~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~--p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~ 167 (213)
T 2x1w_L 90 YQSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTE--LNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMK 167 (213)
T ss_dssp EECCCEEEEECBCCEEEEEEESCSCEEEETTCCEEEEEEEEEC--TTBCCEEEEECSCSSCCSEEEEEEEECCCSSCSCE
T ss_pred EEEEEEEEEEeCCcccceEEcCCCCeEEcCCCCEEEEEEEECC--CCCceEEEEEecCCccceEEEeccccccccCccce
Confidence 222 1444442 12222223221 22332344444332 122234899877654210 0 00 1
Q ss_pred cceeEEEEcCCCCCCeEEEEEEEEcCCCCCccceeeeccCCC
Q psy7040 567 DYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTDKP 608 (716)
Q Consensus 567 ~~~~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~~~~v~~~p 608 (716)
.....+.|.+++..+.+.|.|.|.|..|....+..+.|.++|
T Consensus 168 ~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p 209 (213)
T 2x1w_L 168 KFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEDP 209 (213)
T ss_dssp EEEEEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC--
T ss_pred eeeEEEEECCCCcccCEEEEEEEecCCCcEEEEEEEEEeccc
Confidence 123569999999999999999999999977666666666655
No 420
>2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens}
Probab=98.86 E-value=1.2e-08 Score=79.47 Aligned_cols=80 Identities=18% Similarity=0.160 Sum_probs=58.8
Q ss_pred CCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCCcEEEecccCCCeEEecCCCCCcEEEEEEEEEecCcc
Q psy7040 56 DPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETGVWIPVGKTREPEMDVTGLTPGHEYKFRVKALNKEGE 135 (716)
Q Consensus 56 ~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~~~~g~ 135 (716)
.++..|++..++.+++.|+|.+|...+ ..+..|+|.|..... .. ......++++|.||+|++.|.|+|+|......
T Consensus 9 s~v~~l~v~~~t~~Sv~LsW~~p~~~~-~~i~~Y~v~~~~~~~--~~-~~~~~~t~~~i~gL~PgT~Y~~~V~A~~~~~~ 84 (104)
T 2dle_A 9 IQVFDVTAVNISATSLTLIWKVSDNES-SSNYTYKIHVAGETD--SS-NLNVSEPRAVIPGLRSSTFYNITVCPVLGDIE 84 (104)
T ss_dssp CBEEEEEEEEECSSCEEEEEEESCSTT-CCSCEEEEEEECSSC--EE-EEEESSSEEECCSCCSSCEEEEEEEEESSSCC
T ss_pred CCCceEEEEEeecCEEEEEEcCCCCCC-CceEEEEEEEECCCC--eE-EEcCCCCEEEECCCCCCCEEEEEEEEEECCcc
Confidence 344568888999999999999775333 336789999975432 22 22334589999999999999999999965555
Q ss_pred CCCc
Q psy7040 136 SEPL 139 (716)
Q Consensus 136 ~~~s 139 (716)
+.+.
T Consensus 85 ~~p~ 88 (104)
T 2dle_A 85 GTPG 88 (104)
T ss_dssp CBCE
T ss_pred cCCe
Confidence 4443
No 421
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=98.86 E-value=1e-08 Score=77.94 Aligned_cols=68 Identities=10% Similarity=0.158 Sum_probs=61.3
Q ss_pred EEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcC
Q psy7040 436 IKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNS 504 (716)
Q Consensus 436 ~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~ 504 (716)
+.+..|+.+.|.|.+.+ |.+.+.|++++..+..+.++.+..++....|.|.++.+.|.|.|+|.|.|.
T Consensus 16 v~~~~g~~v~l~C~v~~-p~~~v~W~k~g~~i~~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~ 83 (91)
T 2lvc_A 16 VHAITSECVMLACEVDR-EDAPVRWYKDGQEVEESDFVVLENEGPHRRLVLPATQPSDGGEFQCVAGDE 83 (91)
T ss_dssp EECCTTCCEEEEEECSC-TTSCCEEEETTSCCCCCSSCEEEEETTEEEEEESSCCGGGCSEEEEECSSC
T ss_pred EEEECCCcEEEEEEECC-CCcEEEEEECCEEeeeeeeeeEEecCCeEEEEeCCCChhhcEEEEEEEcce
Confidence 44567999999999966 888999999999999999999999988899999999999999999999664
No 422
>2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A
Probab=98.86 E-value=4.9e-09 Score=79.45 Aligned_cols=77 Identities=19% Similarity=0.334 Sum_probs=60.8
Q ss_pred CceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCCcE--EEecccCCCeEEecCCCCCcEEEEEEEEEecCccCC
Q psy7040 60 PLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETGVW--IPVGKTREPEMDVTGLTPGHEYKFRVKALNKEGESE 137 (716)
Q Consensus 60 ~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~--~~~~~~~~~~~~i~~L~~~~~y~~~v~a~~~~g~~~ 137 (716)
.+++.+++.+++.|+|.+|. .++++|+|.|....++.- ...-....+++.|.||.|++.|.++|.|.+..+.+.
T Consensus 11 ~l~vt~vt~~S~~lsW~~p~----~~v~~Y~I~y~~~~g~~~~~~~~v~g~~~s~~l~~L~PgT~Y~V~v~a~~~~~~S~ 86 (95)
T 2h41_A 11 SESVTEITASSFVVSWVSAS----DTVSGFRVEYELSEEGDEPQYLDLPSTATSVNIPDLLPGRKYIVNVYQISEDGEQS 86 (95)
T ss_dssp TTSCCCCGGGCEEEECCCSC----TTEEEEEEEEEETTTCCCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEETTSCEE
T ss_pred EEEEEEeCCCeEEEEECCCC----CCccEEEEEEEeCCCCCcceEEECCCCccEEEECCCCCCCEEEEEEEEEcCCCccc
Confidence 36788999999999999875 349999999988765321 122234468999999999999999999999888776
Q ss_pred Ccc
Q psy7040 138 PLE 140 (716)
Q Consensus 138 ~s~ 140 (716)
+..
T Consensus 87 p~s 89 (95)
T 2h41_A 87 LIL 89 (95)
T ss_dssp EEE
T ss_pred CEE
Confidence 543
No 423
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=98.86 E-value=1.1e-08 Score=93.47 Aligned_cols=131 Identities=17% Similarity=0.193 Sum_probs=91.2
Q ss_pred CeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEE-EeccCCCeEEE
Q psy7040 382 PKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDIN-VIGEPIPTKEW 460 (716)
Q Consensus 382 ~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~-v~~~p~~~~~W 460 (716)
..+.|.++...+.+.|+|.|.|..|....+ ......+.. +|.+.. ......+..|..+.|.|. +.+.|.+.+.|
T Consensus 65 ~~L~i~~v~~~D~G~Y~C~~~~~~g~~~~~-~~~~l~V~~---~p~~~~-~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W 139 (212)
T 1f97_A 65 SGITFSSVTRKDNGEYTCMVSEEGGQNYGE-VSIHLTVLV---PPSKPT-ISVPSSVTIGNRAVLTCSEHDGSPPSEYSW 139 (212)
T ss_dssp TEEEESCCCGGGCEEEEEEEEETTSSSEEE-EEEEEEEEB---CCCCCE-EECCSEEETTSCEEEEEECSCCBSCCEEEE
T ss_pred eeEEEcccCcccCeEEEEEEEccCCCcccE-EEEEEEEEc---CCCCcc-cCCccccCCCCeEEEEEEcccCcCCCEEEE
Confidence 678999999999999999999987722111 111122222 333221 122356889999999999 79999999999
Q ss_pred EeCCe-EeccCCcE-------EEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCce--eeEEEEEEE
Q psy7040 461 LCNDI-TIISKDRF-------KIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTD--KGTAKVTVL 517 (716)
Q Consensus 461 ~~~~~-~~~~~~~~-------~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~--~~s~~~~v~ 517 (716)
++++. .+...... ..........|.|.++...|.|.|+|.|.|..|.. +..+.+.+.
T Consensus 140 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~V~ 206 (212)
T 1f97_A 140 FKDGISMLTADAKKTRAFMNSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAV 206 (212)
T ss_dssp EETTEESBC-----CBSCSSSCEEECTTTCCEEESSCCGGGCEEEEEEEECSSSCCEECCCEEEEEE
T ss_pred EeCCcccccccccccccccCceeEecCCCceEEEEecChhhCcEEEEEEccccCCccccceEEEEEE
Confidence 99998 76543321 22333445689999999999999999999999987 444444443
No 424
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=98.85 E-value=1.1e-08 Score=91.90 Aligned_cols=128 Identities=21% Similarity=0.340 Sum_probs=94.8
Q ss_pred CCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccCCCeEE
Q psy7040 380 DTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKE 459 (716)
Q Consensus 380 ~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~ 459 (716)
+...+.|.++...+.+.|+|.+.|..|..........+. .+|.+.. .+....+..|..+.|.|.+.+.|.+.+.
T Consensus 60 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~-----~~p~~~~-~~~~~~~~~g~~~~l~C~~~g~p~~~v~ 133 (192)
T 2iep_A 60 NGQLLTILSVEDSDDGIYCCTANNGVGGAVESCGALQVK-----MKPKITR-PPINVKIIEGLKAVLPCTTMGNPKPSVS 133 (192)
T ss_dssp GGTEEEESSCCGGGCEEEEEEEECSSSCCEEEEEEEEEE-----EEEEEEE-CCCCEEEETTSCEEECCEEEEESCCEEE
T ss_pred CccEEEEcCCCcccCeEEEEEEEcCCCceeEeEEEEEEE-----eCCcccc-CCcceEEeCCCcEEEEEEEeccCCceEE
Confidence 335689999999999999999999876532211111111 1333332 2345778899999999999999999999
Q ss_pred EEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCce-eeEEEEEE
Q psy7040 460 WLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTD-KGTAKVTV 516 (716)
Q Consensus 460 W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~-~~s~~~~v 516 (716)
|++++..+....++.+...+ .|.|.++...|.|.|+|.|.|..|.. +....+.+
T Consensus 134 W~~~~~~~~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V 188 (192)
T 2iep_A 134 WIKGDSALRENSRIAVLESG---SLRIHNVQKEDAGQYRCVAKNSLGTAYSKLVKLEV 188 (192)
T ss_dssp EEETTEECCCCSSEEECTTS---CEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred EEeCCEEccCCCcEEEecCC---cEEEecCChhhCEEEEEEEEcCCCcEEEEEEEEEE
Confidence 99999988777666554332 69999999999999999999999877 33454444
No 425
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=98.85 E-value=1.6e-08 Score=81.18 Aligned_cols=78 Identities=18% Similarity=0.302 Sum_probs=64.8
Q ss_pred cCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCC-------CeEEEEECCCCCCCceeEEEEEEcCCCceeeEE
Q psy7040 440 AGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDD-------KSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTA 512 (716)
Q Consensus 440 ~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~-------~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~ 512 (716)
.+..+.+.|.+.|.|.|.+.|++++..+....+..+.... ....|.|.++.+.|.|.|+|.|.|..|....++
T Consensus 14 ~~~~~~l~c~v~G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~~t~ 93 (126)
T 1he7_A 14 EMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASI 93 (126)
T ss_dssp CCCEEEEEEEECCSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred cCccEEEEEEEeeeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeEEEEE
Confidence 4567889999999999999999999999877765443221 246799999999999999999999999987777
Q ss_pred EEEEE
Q psy7040 513 KVTVL 517 (716)
Q Consensus 513 ~~~v~ 517 (716)
.+.+.
T Consensus 94 ~l~v~ 98 (126)
T 1he7_A 94 MAAFM 98 (126)
T ss_dssp EECCC
T ss_pred EEEEE
Confidence 66655
No 426
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=98.85 E-value=9e-09 Score=91.61 Aligned_cols=132 Identities=8% Similarity=0.080 Sum_probs=82.4
Q ss_pred eeEEEccceeeeeccccceeEEEEcC-CCCCCeEEEEEEEEcCCCCCccceeeeccC--CCCC-Cc-----------cce
Q psy7040 551 IKWIRTNDKRVTIDNVDYFTKITIRP-LQRSDTAQYTVTATNSQGKDQVFIEVVVTD--KPSA-PE-----------GPI 615 (716)
Q Consensus 551 ~~w~~~~~~~~~~~~~~~~~~~~i~~-L~~~~~y~~~v~a~n~~G~~~~s~~~~v~~--~p~~-~~-----------~~~ 615 (716)
+.|++.+...... ....+.|.+ +...+.+.|+|.|.|..|.......+.|.. +|.. +. .+.
T Consensus 29 i~W~k~g~~l~~~----~~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (186)
T 1jbj_A 29 LKWEKNGQELPQK----HDKHLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKARVGSADDAKKDAAKKDDAKKDDAKKDG 104 (186)
T ss_dssp CEEEETTEEECSC----CCSEEEEESCCTTTSCEEEEEECSSCCCCCCEEECCCCCSCCCCCCCCCCCCCCSCCSSSTTC
T ss_pred eEEEECCEECCCC----CCCEEEECCCCccccCEEEEEEEEeCCCcEEEEEEEEEecccccccccccccccccCCccccc
Confidence 7788876654321 236899999 999999999999999988744333333311 1110 00 000
Q ss_pred eec---cceeEEEEEEeeEEEEeeeeccCcee-eEEEEeCCeEeeecccceeeEEEEccCCCCCcEEEEEEEEcCCCCc
Q psy7040 616 QWL---LTLTDVTWEISNYLQELHSSLMPISL-ESQYLMNDKRVTIDNVDYFTKITIRPLQRSDTAQYTVTATNSQGKD 690 (716)
Q Consensus 616 ~~~---~~~v~l~w~i~~y~v~~~~~~~~~~~-~~~W~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~y~~~a~n~~G~~ 690 (716)
... .....+.--..|-.+ .|.|.+.. .+.|+++|..+.... .....|.|.++...|+|.|+|.|.|..|..
T Consensus 105 ~~~~~~~~~~~~~~~~~G~~v---~l~C~~p~p~i~W~k~g~~i~~~~-~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 105 SQTNKAKNLVQVDGSRGDGSV---LLTCGLTDKTIKWLKDGSIISPLN-ATKNTWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp CSCCCCSSCCEECCCSSSCEE---EEECSSSCSCEEEEETTEECCCSS-CCSSCCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred cccccccccccceecCCCCeE---EEEeeCCCCeEEEEECCEECcccC-CCcceEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 000 000000000012222 26777644 999999999986432 244789999999999999999999998865
No 427
>3up1_A Interleukin-7 receptor subunit alpha; cytokine receptor, fibronectin type 3 fold, membrane and SOL glycosylation, immune system; HET: NAG FUC NGA; 2.15A {Homo sapiens} PDB: 3di3_B* 3di2_B*
Probab=98.84 E-value=2.8e-07 Score=82.52 Aligned_cols=138 Identities=12% Similarity=0.104 Sum_probs=91.0
Q ss_pred ceEEEcCCCCCCeEEEEEEEEcCCCCCCCCcccceEEecCCCCCCCCCCCcEEEeee-CCeEEEEecCCCCCCC-ccceE
Q psy7040 281 TGLEVEGLIPNHKYKFRVRAVNKQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDFD-TDFVELAWTPPEQNGG-SPIVG 358 (716)
Q Consensus 281 ~~~~i~~L~p~~~y~~~v~a~n~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~-~~~i~l~W~~p~~~~~-~~i~~ 358 (716)
......++.....+.|.|.+ |... +... .+. ......|.+|.++.+.... ...+.|+|.+|....+ .....
T Consensus 76 y~~~~~~~~l~~~~~i~V~l----G~~~-S~~~-~f~-l~~iVKPdPP~nLtv~~~~~~~~l~LsW~~P~~~~~~~~~L~ 148 (223)
T 3up1_A 76 YFIETKKFLLIGKSNICVKV----GEKS-LTCK-KID-LTTIVKPEAPFDLSVVYREGANDFVVTFNTSHLQKKYVKVLM 148 (223)
T ss_dssp EEEEESCBCCSSEEEEEEEE----TTEE-EEEE-EEE-GGGSBCCCCCEEEEEEEETTTTEEEEEEECGGGGCSSSCCEE
T ss_pred EEeecCCEEEEeccEEEEEc----CCce-eccE-EEE-ecceEEcCCCcceEEEEEcCCCCEEEEECCCCCCCCcceeEE
Confidence 44456778888888888873 3221 1111 122 2233668899999988664 4679999999754332 22578
Q ss_pred EEEEEeecC-CCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEEeC-CCCCCCCCCCCceEeecCCCCC
Q psy7040 359 YIIEKKEKY-SPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNK-GGPGEPSDPTAPHIARAKKVSP 426 (716)
Q Consensus 359 y~v~~~~~~-~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~-~g~~~~s~~~~~~~~~~~~~~P 426 (716)
|.|+|+... ...|.... .......+.+.+|.|++.|.|+|||... .+.|.+|+.+.......+..+|
T Consensus 149 YEVrYr~~~~~~~W~~v~-~~~t~~~i~l~~L~Pgt~Y~vqVR~r~~~~~~G~WSeWS~~~~~~T~~~~P 217 (223)
T 3up1_A 149 HDVAYRQEKDENKWTHVN-LSSTKLTLLQRKLQPAAMYEIKVRSIPDHYFKGFWSEWSPSYYFRTPEINN 217 (223)
T ss_dssp EEEEEEESSCSSCCEEEE-ESSSEEEEEGGGSCTTCEEEEEEEEEECSSCCBCCCCCCCCEEEECCCCC-
T ss_pred EEEEEEeCCCCCceEEEE-ecCceeEEeccccCCCcEEEEEEEEeeCCCCCCCCCCCCCCeEEECCCCCC
Confidence 999999875 46787543 2222234556799999999999999985 4556677777666666655555
No 428
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=98.84 E-value=5.5e-09 Score=82.77 Aligned_cols=84 Identities=23% Similarity=0.453 Sum_probs=76.1
Q ss_pred cccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEE
Q psy7040 433 LSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTA 512 (716)
Q Consensus 433 ~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~ 512 (716)
+..+.+..|..+.|.|.+.+.|.+.+.|++++..+....++.+........|.|.++...|.|.|+|.|.|..|....++
T Consensus 21 p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~ 100 (106)
T 1nct_A 21 PRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFEISSVQASDEGNYSVVVENSEGKQEAEF 100 (106)
T ss_dssp CCCEEESSSSCEECCEEEECSSCCBCCBCSSSSCCTTCSSEEEEECSSEEEEEECCCCSSCCSEEEECCBCSSCBCCEEE
T ss_pred CCCEEEeCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCEEEEEECcCCchhCEEEEEEEEeCCCeEEEEE
Confidence 45688999999999999999999999999999988888888888777788999999999999999999999999988877
Q ss_pred EEEE
Q psy7040 513 KVTV 516 (716)
Q Consensus 513 ~~~v 516 (716)
.+.|
T Consensus 101 ~l~V 104 (106)
T 1nct_A 101 TLTI 104 (106)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7765
No 429
>2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C*
Probab=98.84 E-value=3.1e-07 Score=82.27 Aligned_cols=177 Identities=11% Similarity=0.157 Sum_probs=113.5
Q ss_pred eEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCC--CCCeEEccc---cCcccceEEEcC--CCCCCeEEEEEEEEc
Q psy7040 230 LKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEA--TGRWTPAGE---TEGPVTGLEVEG--LIPNHKYKFRVRAVN 302 (716)
Q Consensus 230 ~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~--~~~~~~~~~---~~~~~~~~~i~~--L~p~~~y~~~v~a~n 302 (716)
+.........++.+|.+.. .. ....|.+.+.-.. ...+..+.. ..+....+.+.. +.....|.+.|. +
T Consensus 5 l~C~~~~~~~~~C~W~~~~--~~-~~~~y~l~y~~~~~~~~~~~~C~~y~~~~~~~~~C~~~~~~~~~~~~~~i~v~--~ 79 (199)
T 2b5i_C 5 VQCFVFNVEYMNCTWQSSS--EP-QPTNLTLHYWYKNSDNDKVQKCSHYLFSEEITSGCQLQKKEIHLYQTFVVQLQ--D 79 (199)
T ss_dssp CEEEEETTTEEEEECCCCS--SS-SCCCCEEEEEETTSSSCCCEECSSEEEETTEEEEEEEEGGGCCTTSCEEEEEE--C
T ss_pred CEEEECCCcEEEEEecCCC--cC-CCceEEEEEEECCCCCCccccCCCccccCCceeEEEECCcccccceEEEEEEE--e
Confidence 6666666789999999633 11 2356777665332 345666643 122233455544 444556666664 3
Q ss_pred CCCCCCCCcccceEEecCCCCCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCC
Q psy7040 303 KQGKSEPLTTTASIEAKNPFNQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTP 382 (716)
Q Consensus 303 ~~g~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~ 382 (716)
..|... +.. ..........|.+|.++.+.......+.|+|.+|... ....|.|+|+...+..|.... .....
T Consensus 80 ~~g~~~-s~~--~~~~~~~iVkP~pP~~l~~~~~~~~~l~l~W~~p~~~---~~l~yev~y~~~~~~~w~~~~--~~~~~ 151 (199)
T 2b5i_C 80 PREPRR-QAT--QMLKLQNLVIPWAPENLTLHKLSESQLELNWNNRFLN---HCLEHLVQYRTDWDHSWTEQS--VDYRH 151 (199)
T ss_dssp SSCTTC-EEE--EEECGGGSEECCCCEEEEEEEEETTEEEEEEECSSCS---TTCEEEEEEEETTCSSCEEEE--ECSSC
T ss_pred CCccee-cce--EEEchHHceecCCCcEEEEEECCCCCEEEEECCCCCC---CceEEEEEEeecCCcccEEEe--ccCce
Confidence 333221 111 1111112235889999999888888999999997522 245899999987766787654 23467
Q ss_pred eEEecCCCCCCeEEEEEEEEeCC---CCCCCCCCCCceEe
Q psy7040 383 KGKVLDLIEGNQYEFRVLAVNKG---GPGEPSDPTAPHIA 419 (716)
Q Consensus 383 ~~~i~~l~~~~~Y~~~v~a~n~~---g~~~~s~~~~~~~~ 419 (716)
.+.|.+|.|++.|.|+|+|.... +.|.+|+.+.....
T Consensus 152 ~~~l~~l~p~~~Y~vqVR~~~~~~~~~~g~WSeWS~~~~~ 191 (199)
T 2b5i_C 152 KFSLPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSHPIHW 191 (199)
T ss_dssp EEEECSCCTTSCEEEEEEEECCSSSCCCCCCCCCCCCEEC
T ss_pred EEEecCCCCCcEEEEEEEEeccCCcCcCCeECCCCCCEEe
Confidence 89999999999999999999864 35677777665543
No 430
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.84 E-value=2.9e-08 Score=79.44 Aligned_cols=92 Identities=27% Similarity=0.453 Sum_probs=74.3
Q ss_pred CCcccccccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEecc-CCcEEEEeC-CCeEEEEECCCCCCCceeEEEEEE
Q psy7040 425 SPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIIS-KDRFKIVND-DKSTKLKVFDSKRGDSGIYTLAVK 502 (716)
Q Consensus 425 ~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~-~~~~~~~~~-~~~~~l~i~~l~~~~~~~y~~~a~ 502 (716)
+|.+.. .+..+.+..|..+.|.|.+.+.|.+.+.|++++..+.. ..++.+... .....|.|.++...|.|.|+|.|.
T Consensus 8 ~P~~~~-~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 86 (110)
T 2dm2_A 8 APFFEM-KLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAA 86 (110)
T ss_dssp CCCBSS-CCCCEEEETTCCEEEEEEBCCSSCCEEEEECSSCBCCTTCSSEEEEECTTCEEEEEESSCCTTTCSCCEEEEE
T ss_pred CCEEEe-cCcCeEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCeEEEEECCCcEEEEEECCCChhhCEEEEEEEE
Confidence 444442 34567899999999999999999999999999988865 456666655 344589999999999999999999
Q ss_pred cCCCceeeEEEEEEE
Q psy7040 503 NSWGTDKGTAKVTVL 517 (716)
Q Consensus 503 n~~g~~~~s~~~~v~ 517 (716)
|..|.......+.+.
T Consensus 87 N~~g~~~~~~~l~V~ 101 (110)
T 2dm2_A 87 NPQGRISCTGRLMVQ 101 (110)
T ss_dssp CTTCCEEECCCEEEE
T ss_pred ECCCeEEEEEEEEEE
Confidence 999987766665554
No 431
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=98.83 E-value=4e-08 Score=88.89 Aligned_cols=133 Identities=19% Similarity=0.246 Sum_probs=96.8
Q ss_pred CCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCc-eEeec---CCCCCcccccccccEEEecCCeEEEEEEEeccCC
Q psy7040 380 DTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAP-HIARA---KKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPI 455 (716)
Q Consensus 380 ~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~-~~~~~---~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~ 455 (716)
....+.|.++...+...|+|.+.|..+.......... ..... ...+|.+.... ....+..|..+.|.|.+.+.|.
T Consensus 64 ~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~g~~~~l~C~~~g~p~ 142 (201)
T 3s97_C 64 TNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVVQF-KDVYALMGQNVTLECFALGNPV 142 (201)
T ss_dssp TTCCEEESSCCGGGCEEEEEEEEEGGGTEEEECCCEEEEEECCSSCCCEEEEEEEEC-CCEEEETTCCEEEEEEEEEESC
T ss_pred CCCeEEECcCCcccCeEEEEEEEecCCCcchhhcccceeeccccccCCCCCceEecC-CceEEecCCcEEEEEEccCCCC
Confidence 4567999999999999999999997654322111111 11111 11244443332 2678899999999999999999
Q ss_pred CeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEEEEEEE
Q psy7040 456 PTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVL 517 (716)
Q Consensus 456 ~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v~ 517 (716)
+.+.|++++..+..... +.. ....|.|.++...|.|.|+|.|.|..|....+..+.|.
T Consensus 143 p~v~W~~~~~~~~~~~~--~~~--~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 200 (201)
T 3s97_C 143 PDIRWRKVLEPMPSTAE--IST--SGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQ 200 (201)
T ss_dssp CEEEEEETTBCCCTTCE--EET--TTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CceEEEeCCCcCCCcee--ecC--CCCEEEEccCChhhCEEEEEEEEecCCceeeeEEEEEe
Confidence 99999999987754422 222 24489999999999999999999999998888777663
No 432
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=98.83 E-value=2.3e-08 Score=89.96 Aligned_cols=124 Identities=11% Similarity=-0.023 Sum_probs=78.5
Q ss_pred CCCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccCCCeE
Q psy7040 379 GDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTK 458 (716)
Q Consensus 379 ~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~ 458 (716)
.....+.|.++...+.+.|+|.|.|..|.+..+...... +.....+|.+... ....+..|+.+.|.|.+.+.| +.+
T Consensus 55 ~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~-V~~~~~~p~i~~~--~~~~v~~G~~v~L~C~~~~~p-~~~ 130 (196)
T 2d3v_A 55 KNKARFSIPSMTEHHAGRYRCYYYSPAGWSEPSDPLELV-VTGFYNKPTLSAL--PSPVVTSGENVTLQCGSRLRF-DRF 130 (196)
T ss_dssp TTEEEEEESSCCGGGCEEEEEEEEETTEECBCCCCEEEE-EECSSCCCEEEC-------------CEEEEEESSCC-SEE
T ss_pred ccccEEEeccCChhHCeEEEEEEeCCCCcCCcCccEEEE-ecCCCCCCeEEcc--CCccccCCCcEEEEEEcCCCC-CEE
Confidence 345678999999999999999999987765444333222 2222235555422 224688999999999999998 899
Q ss_pred EEEeCCeEeccCCcEEEEe--CCCeEEEEECCCCCCCceeEEEEEEcCCC
Q psy7040 459 EWLCNDITIISKDRFKIVN--DDKSTKLKVFDSKRGDSGIYTLAVKNSWG 506 (716)
Q Consensus 459 ~W~~~~~~~~~~~~~~~~~--~~~~~~l~i~~l~~~~~~~y~~~a~n~~g 506 (716)
.|++++..+.......... ......|.|.++...|.|.|+|.|.|..+
T Consensus 131 ~W~k~g~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~ 180 (196)
T 2d3v_A 131 ILTEEGDHKLSWTLDSQLTPSGQFQALFPVGPVTPSHRWMLRCYGSRRHI 180 (196)
T ss_dssp EEEEC---CCEEEEECEECTTSCEEEEEECCCCBTTBCEEEEEEEEETTE
T ss_pred EEEccCCcccccccccccccCCCceeEEEeeecCcccCeeEEEEEEccCC
Confidence 9999998763221111111 12346899999999999999999999765
No 433
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=98.82 E-value=2.2e-08 Score=77.46 Aligned_cols=86 Identities=20% Similarity=0.364 Sum_probs=71.6
Q ss_pred CCcccccccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcC
Q psy7040 425 SPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNS 504 (716)
Q Consensus 425 ~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~ 504 (716)
+|.+. ..+..+.+..|+.+.|.|.+.+.| +.+.|++++..+....++.+. ...|.|.++...|.|.|+|.|.|.
T Consensus 9 pp~~~-~~~~~~~v~~G~~v~l~C~~~g~p-p~i~W~k~g~~~~~~~~~~~~----~~~L~i~~~~~~D~G~Y~C~a~n~ 82 (95)
T 2ckn_A 9 PWGVP-VEVESLLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLVESNRTRIT----GEEVEVRDSIPADSGLYACVTSSP 82 (95)
T ss_dssp SCCBT-TBBCCEEECTTSCEEEECCEESSC-CEEEEEBTTBCCCCCSSEEEC----SSEEEESSCCGGGSEEEEEEEEET
T ss_pred CCEEE-cCcceEEEcCCCeEEEEEECCCCC-CceEEEECCEecCCCCCEEEe----CCEEEECCCChHHCEEEEEEeccC
Confidence 44443 335678899999999999999997 799999999888766666553 348999999999999999999999
Q ss_pred CCceeeEEEEEE
Q psy7040 505 WGTDKGTAKVTV 516 (716)
Q Consensus 505 ~g~~~~s~~~~v 516 (716)
.|....+..+.+
T Consensus 83 ~g~~~~~~~l~V 94 (95)
T 2ckn_A 83 SGSDTTYFSVNV 94 (95)
T ss_dssp TEEEEEEEEEEE
T ss_pred CCcEEEEEEEEE
Confidence 998887777665
No 434
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=98.81 E-value=4.2e-08 Score=87.74 Aligned_cols=126 Identities=15% Similarity=0.270 Sum_probs=90.1
Q ss_pred CCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccCCCeEEE
Q psy7040 381 TPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEW 460 (716)
Q Consensus 381 ~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W 460 (716)
...+.|.++...+.+.|+|.+.|..|..... ...... ..+|.+. .......+..|..+.|.|.+.+.|.+.+.|
T Consensus 57 ~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~--~~~l~v---~~~p~~~-~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W 130 (189)
T 2v44_A 57 RSRLTIYNANIEDAGIYRCQATDAKGQTQEA--TVVLEI---YQKLTFR-EVVSPQEFKQGEDAEVVCRVSSSPAPAVSW 130 (189)
T ss_dssp EEEEEECSCCGGGCEEEEEEEECTTSCEEEE--EEEEEE---ECCCEEE-SCCCSEEEETTSCEEECCEEECSSCCEEEE
T ss_pred eEEEEEccCCcccCeEEEEEEEeCCCCcEEE--EEEEEE---ecCCcee-ecCCcEEEeCCCCEEEEEEECcCCCCcEEE
Confidence 3578999999999999999999987653211 111111 1233332 223456789999999999999999999999
Q ss_pred EeCCeEecc--CCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEEEEE
Q psy7040 461 LCNDITIIS--KDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVT 515 (716)
Q Consensus 461 ~~~~~~~~~--~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~ 515 (716)
++++..+.. ..++.+... ..|.|.++...|.|.|+|.|.|..|.......+.
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~---~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~~~ 184 (189)
T 2v44_A 131 LYHNEEVTTISDNRFAMLAN---NNLQILNINKSDEGIYRCEGRVEARGEIDFRDII 184 (189)
T ss_dssp EEEC--CEECCCTTEEECTT---SCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEE
T ss_pred EECCcEEeccCCCCEEEecC---CcEEEEEcCcccCeEEEEEEEccccCceeeeeEE
Confidence 999987752 344444322 3799999999999999999999997766554443
No 435
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=98.81 E-value=8.6e-08 Score=86.19 Aligned_cols=160 Identities=11% Similarity=0.062 Sum_probs=101.9
Q ss_pred eCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEe-eecCCCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCC
Q psy7040 337 DTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCA-QTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTA 415 (716)
Q Consensus 337 ~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~-~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~ 415 (716)
.+..++|.|.... +...|..+ +........... ........+.|.++...+...|+|.|.|..|.+..+....
T Consensus 18 ~G~~v~L~C~~~~-----~~~~~~w~-k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~ 91 (196)
T 3p2t_A 18 WGNSVTIWCQGTL-----EAREYRLD-KEESPAPWDRQNPLEPKNKARFSIPSMTEDYAGRYRCYYRSPVGWSQPSDPLE 91 (196)
T ss_dssp TTCCEEEEEECCT-----TCCEEEEE-ETTSCSCSEEECCCSSSSEEEEEESSCCGGGCEEEEEEEEETTEEBCCCCCEE
T ss_pred CCCcEEEEeeCCC-----CCCEEEEE-ECCCCCcccccccccCCceEEEEeccCCcccCceEEEEEeCCCcccCCCccEE
Confidence 4667888887632 12233322 222211121111 1123456799999999999999999999887544444332
Q ss_pred ceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcE-EEEeCCCeEEEEECCCCCCCc
Q psy7040 416 PHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRF-KIVNDDKSTKLKVFDSKRGDS 494 (716)
Q Consensus 416 ~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~-~~~~~~~~~~l~i~~l~~~~~ 494 (716)
.. +.....+|.+.... ...+..|+.+.|.|.+.+. .+.+.|++++..+...... ..........|.|.++...|.
T Consensus 92 l~-V~~~~~~p~~~~~~--~~~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~ 167 (196)
T 3p2t_A 92 LV-MTGAYSKPTLSALP--SPLVTSGKSVTLLCQSRSP-MDTFLLCKERAAHPLLCLRSEHGAQQHQAEFPMSPVTSVHG 167 (196)
T ss_dssp EE-EECSSCCCEEEEES--CSEECTTCCEEEEEEEEEE-EEEEEEEETTCCCGGGSEEEEEEEEEEEEEEEECSCCGGGC
T ss_pred EE-ecCCCCCCEEEeCC--cceecCCCeEEEEEecCCC-CCEEEEEeCCCcccceeecccccccCcceEEEeCCCcccCC
Confidence 22 22223345543221 2267899999999999874 4689999999876443322 222223456899999999999
Q ss_pred eeEEEEEEcCCC
Q psy7040 495 GIYTLAVKNSWG 506 (716)
Q Consensus 495 ~~y~~~a~n~~g 506 (716)
|.|+|.|.|..+
T Consensus 168 G~Y~C~a~n~~~ 179 (196)
T 3p2t_A 168 GTYRCFSSHGFS 179 (196)
T ss_dssp EEEEEEEECGGG
T ss_pred CeEEEEEEcCCC
Confidence 999999999876
No 436
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=98.81 E-value=2.6e-08 Score=89.31 Aligned_cols=128 Identities=13% Similarity=0.178 Sum_probs=91.9
Q ss_pred CCCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccCCCeE
Q psy7040 379 GDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTK 458 (716)
Q Consensus 379 ~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~ 458 (716)
.....+.|.++...+.+.|+|.+.|..|.. .+. ...... ..+|.+. ..+....+..|..+.|.|.+.+.|.+.+
T Consensus 59 ~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~-~~~l~v---~~~p~~~-~~~~~~~~~~g~~~~l~C~~~g~p~~~v 132 (191)
T 1epf_A 59 DDSSTLTIYNANIDDAGIYKCVVTAEDGTQ-SEA-TVNVKI---FQKLMFK-NAPTPQEFKEGEDAVIVCDVVSSLPPTI 132 (191)
T ss_dssp TTEEEEEECSCCGGGCEEEEEEEEETTTEE-EEE-EEEEEE---ECCSEEE-ECCSSEECCTTSCEEECCEEECSSCCEE
T ss_pred CCceEEEEccCCcccCEEEEEEEEcCCCcc-eEE-EEEEEe---ecCceEe-cCCCcEeecCCCeEEEEEEECCCCCCEE
Confidence 345678999999999999999999987521 111 111111 1234433 2234567889999999999999999999
Q ss_pred EEEeCCeEeccCC--cEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEEEEE
Q psy7040 459 EWLCNDITIISKD--RFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVT 515 (716)
Q Consensus 459 ~W~~~~~~~~~~~--~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~ 515 (716)
.|++++..+.... ++.+.. ...|.|.++...|.|.|+|.|.|..|.......+.
T Consensus 133 ~W~~~~~~~~~~~~~~~~~~~---~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~i~ 188 (191)
T 1epf_A 133 IWKHKGRDVILKKDVRFIVLS---NNYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQ 188 (191)
T ss_dssp EEEETTEEGGGGCCTTEEECT---TSCEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEE
T ss_pred EEEECCEEeeccCCceEEEec---CCeEEECCCChhhCEEEEEEEEEecceeEEEEEEE
Confidence 9999998876432 333322 22699999999999999999999887665554443
No 437
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=98.81 E-value=8.5e-08 Score=85.67 Aligned_cols=86 Identities=14% Similarity=0.090 Sum_probs=70.5
Q ss_pred CCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEEeC
Q psy7040 325 PGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNK 404 (716)
Q Consensus 325 p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~ 404 (716)
+.+|.++.+...+.+++.|+|.+|. +.+.+|+|.|...+...+..........++++|.+|.|++.|.|+|+|.+.
T Consensus 104 ~~~P~~l~v~~~t~~si~l~W~~p~----~~i~~Y~v~y~~~~~~~~~~~~~v~~~~t~~~l~gL~p~t~Y~~~V~A~~~ 179 (195)
T 2qbw_A 104 SSVPTNLEVVAATPTSLLISWDASY----YGVSYYRITYGETGGNSPVQEFTVPYSSSTATISGLKPGVDYTITVYAYSD 179 (195)
T ss_dssp CCSSCCCEEEEEETTEEEEECCCCC----SSCSEEEEEEEETTCCSCCEEEEEETTCSEEEECSCCTTCEEEEEEEEESS
T ss_pred CCCCcccEEEeCCCCEEEEEEeCCC----CCccEEEEEEEECCCCCcceEEEeCCCCCEEEeCCCCCCCEEEEEEEEEeC
Confidence 4567899999999999999999974 258999999987654443334445667799999999999999999999999
Q ss_pred CCCCCCCCCC
Q psy7040 405 GGPGEPSDPT 414 (716)
Q Consensus 405 ~g~~~~s~~~ 414 (716)
.|.|+.|.+.
T Consensus 180 ~G~g~~S~~v 189 (195)
T 2qbw_A 180 YYGSHHYSPI 189 (195)
T ss_dssp TTSSCBCCCE
T ss_pred CccCCCCCCE
Confidence 9999886653
No 438
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=98.79 E-value=9.3e-08 Score=77.09 Aligned_cols=92 Identities=22% Similarity=0.356 Sum_probs=74.8
Q ss_pred CCcccccccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEecc-CCcEEEEeCC-CeEEEEECCCCCCCceeEEEEEE
Q psy7040 425 SPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIIS-KDRFKIVNDD-KSTKLKVFDSKRGDSGIYTLAVK 502 (716)
Q Consensus 425 ~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~-~~~~~~~~~~-~~~~l~i~~l~~~~~~~y~~~a~ 502 (716)
+|.+. ..+..+.+..|..+.|.|.+.+.|.+.+.|++++..+.. ..++.+...+ ....|.|.++...|.|.|+|.|.
T Consensus 15 ~p~f~-~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 93 (116)
T 2kkq_A 15 APMFI-YKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWYTVSAV 93 (116)
T ss_dssp CCCBS-SCCCCEEEETTEEEEEEEEBCCBSCCEEEEEETTEECCCCBTTEEEEECTTCEEEEEEEEECGGGCEEEEEEEE
T ss_pred CCeEE-eCCCcEEEeCCCcEEEEEEEeccCCCEEEEEECCEECcCCCCeEEEEeCCCCeEEEEECCCCcccCEEEEEEEE
Confidence 44443 335568899999999999999999999999999988874 4667666554 34589999999999999999999
Q ss_pred cCCCceeeEEEEEEE
Q psy7040 503 NSWGTDKGTAKVTVL 517 (716)
Q Consensus 503 n~~g~~~~s~~~~v~ 517 (716)
|..|.....+.+.+.
T Consensus 94 N~~G~~~~~~~l~V~ 108 (116)
T 2kkq_A 94 NEAGVTTCNTRLDVT 108 (116)
T ss_dssp ETTEEEEEEEEEEEE
T ss_pred cCCCeEEEEEEEEEe
Confidence 999988776666554
No 439
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.79 E-value=1.2e-07 Score=88.63 Aligned_cols=65 Identities=11% Similarity=0.030 Sum_probs=44.8
Q ss_pred eccCcee---eEEEEeCCeEeeecc-------cceeeEEEEccCCCCCcEEEEEEEEcCCCC-----ceeeEEEEEecCC
Q psy7040 638 SLMPISL---ESQYLMNDKRVTIDN-------VDYFTKITIRPLQRSDTAQYTVTATNSQGK-----DQVFIEVVVTDKP 702 (716)
Q Consensus 638 ~~~~~~~---~~~W~~~~~~~~~~~-------~~~~~~~~i~~l~~~~~y~y~~~a~n~~G~-----~~~s~~l~v~~~p 702 (716)
|.|.+.+ .+.|+|+|..+.... ......|.|.++. |+|.|+|.|.|..+. .+....|.|..+|
T Consensus 126 L~C~~~~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~--D~G~Y~C~a~~~~~p~~~s~~S~pl~L~V~g~p 203 (257)
T 1b6u_A 126 LSCSSRSSYDMYHLSREGEAHERRFSAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFRDSPYEWSNSSDPLLVSVTGNP 203 (257)
T ss_dssp EEEECSSCCSEEEEEETTSSCEECCBCBCCSSSCCBEEEEEEECC--SCEEEEEEEECSSCTTBBCCCCCCEEECCBCCC
T ss_pred EEEeCCCCCcEEEEEECCcccCcccccccccCCceeEEEEecccc--cCEEEEEEEEcCCCCcccccCCCCEEEEEeccC
Confidence 4455444 889999998765431 1235789999998 999999999986432 2344667888776
Q ss_pred CC
Q psy7040 703 SA 704 (716)
Q Consensus 703 ~~ 704 (716)
..
T Consensus 204 ~~ 205 (257)
T 1b6u_A 204 SN 205 (257)
T ss_dssp --
T ss_pred CC
Confidence 54
No 440
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=98.78 E-value=1.7e-08 Score=89.11 Aligned_cols=158 Identities=15% Similarity=0.097 Sum_probs=101.3
Q ss_pred ccEEEecCCeEEEEEEEeccCCC-eEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEE
Q psy7040 434 SDIKVRAGSNFEFDINVIGEPIP-TKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTA 512 (716)
Q Consensus 434 ~~~~~~~g~~~~~~~~v~~~p~~-~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~ 512 (716)
..+.+.+|+.+.|.|.+.+.+.+ .+.|++++..+.. ....|.|.++...|.|.|+|.+.|..+......
T Consensus 12 ~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~~----------~~~~L~i~~v~~~d~G~Y~C~~~~~~~s~~~~l 81 (176)
T 1f2q_A 12 PWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEE----------TNSSLNIVNAKFEDSGEYKCQHQQVNESEPVYL 81 (176)
T ss_dssp SCSEEETTCCEEEECCTTCC----CCEEEETTEECSC----------CSSEEEECSCCGGGCEEEEEECTTSSCCCCEEE
T ss_pred CCcceecCCcEEEEEeCCCCCCcceEEEEECCeECCC----------CceEEEEeccceecCEEEEEEcCCccccccEEE
Confidence 34678999999999999888875 6999999987643 245899999999999999999998776544333
Q ss_pred EEEEEEEEEEEeCCC--CCCCCceeeEEEEEEe-cCCCceeeeEEEccceeeeeccccceeEEEEcCCCCCCeEEEEEEE
Q psy7040 513 KVTVLGCSLKWNPPE--DDGGAPIEYYMVEKME-TDTGKVLIKWIRTNDKRVTIDNVDYFTKITIRPLQRSDTAQYTVTA 589 (716)
Q Consensus 513 ~~~v~~v~l~W~~p~--~~~~~~i~~y~v~~~~-~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a 589 (716)
.+......+.- +.. ..+.. ..+.... ...+.+.+.|++.+.... .......+.|.++...+.+.|+|.|
T Consensus 82 ~V~~~~~~~~~-~~~~~~~g~~----~~l~C~~~~~~p~~~~~W~~~g~~~~---~~~~~~~L~i~~v~~~d~G~Y~C~a 153 (176)
T 1f2q_A 82 EVFSDWLLLQA-SAEVVMEGQP----LFLRCHGWRNWDVYKVIYYKDGEALK---YWYENHNISITNATVEDSGTYYCTG 153 (176)
T ss_dssp EEECSSEEEEE-SCSEEETTSC----EEEEEEEGGGCCEEEEEEEETTEECC---SCCCSSEEEESSCCGGGCEEEEEEE
T ss_pred EEeCcceeecC-CcceeeCCCC----EEEEEEecCCCCceEEEEEECCEEEe---eecCCCeEEECCCCcccCEEEEEEE
Confidence 33211111111 111 11122 2233332 223345699999876442 1223478999999999999999999
Q ss_pred EcCCCC-CccceeeeccCCCC
Q psy7040 590 TNSQGK-DQVFIEVVVTDKPS 609 (716)
Q Consensus 590 ~n~~G~-~~~s~~~~v~~~p~ 609 (716)
.|..|. ......+.|..+|.
T Consensus 154 ~n~~~~~~s~~~~l~V~~~p~ 174 (176)
T 1f2q_A 154 KVWQLDYESEPLNITVIKAPR 174 (176)
T ss_dssp EETTEEEECCCEEEEEECSCC
T ss_pred EeCCcceEecCEEEEEecCCC
Confidence 997442 22233444665553
No 441
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.78 E-value=4.7e-08 Score=76.99 Aligned_cols=72 Identities=22% Similarity=0.369 Sum_probs=64.2
Q ss_pred cccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCC--cEEEEeCCCeEEEEECCCCCCCceeEEEEEEc
Q psy7040 431 DQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKD--RFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKN 503 (716)
Q Consensus 431 ~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~--~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n 503 (716)
..+.++.+..|..+.|.|.+.+ |.+.+.|++++..+.... ++.+..++....|.|.++...|.|.|+|.|.|
T Consensus 12 ~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n 85 (103)
T 1x44_A 12 KQLEDTTAYCGERVELECEVSE-DDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVMTTG 85 (103)
T ss_dssp BCCCCEEEETTEEEEEEEECSS-SSCCCEEEETTEECCCSTTCSEEEEEETTEEEEEEEEECTTTCSEEEEEETT
T ss_pred ccCCCEEEECCCCEEEEEEecC-CCCeEEEEECCEECCCCCceEEEEEEcCCEEEEEECCCCcccCEEEEEEECC
Confidence 4456788999999999999987 679999999999988777 77888887888999999999999999999987
No 442
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=98.78 E-value=2.1e-08 Score=91.66 Aligned_cols=152 Identities=7% Similarity=-0.052 Sum_probs=95.6
Q ss_pred EEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeE--EEEECCCCCCCceeEEEEEEcCCCceee--E
Q psy7040 436 IKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKST--KLKVFDSKRGDSGIYTLAVKNSWGTDKG--T 511 (716)
Q Consensus 436 ~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~--~l~i~~l~~~~~~~y~~~a~n~~g~~~~--s 511 (716)
..+.+|+.+.|.|.+.+ +.+.+.|++++..+...... ........ .|.|.++...|.|.|+|.|.|..|.... .
T Consensus 18 ~~v~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~~~~-~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~ 95 (218)
T 1uct_A 18 PVIPLDGSVKIQCQAIR-EAYLTQLMIIKNSTYREIGR-RLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDT 95 (218)
T ss_dssp SEEETTCCEEEEECCCT-TCSEEEEEEEETTEEEECSE-ECC----CCCEEEECSCCGGGCEEEEEEEEETTTEEEECCC
T ss_pred CccCCCCCEEEEEEcCC-CCCEEEEEECCCcccccccc-cCCCCcceeeEEEEcccccccCEEEEEEEEcCCCceeecCC
Confidence 36889999999999987 67899999987655322111 11112234 8999999999999999999998764433 3
Q ss_pred EEEEEE----EEEEEEeCCC--CCCCCceeeEEEEEEecCCCceeeeEEEccceeeee-ccccceeEEEEcCCCCCCeEE
Q psy7040 512 AKVTVL----GCSLKWNPPE--DDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTI-DNVDYFTKITIRPLQRSDTAQ 584 (716)
Q Consensus 512 ~~~~v~----~v~l~W~~p~--~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~-~~~~~~~~~~i~~L~~~~~y~ 584 (716)
..+.+. ...+.-.+.. ..+......|. ....+.+...|++.+...... ........+.|.++...+.+.
T Consensus 96 ~~l~V~~~~~~P~i~~~p~~~v~~G~~v~L~C~----~~~~~~~~~~W~k~g~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 171 (218)
T 1uct_A 96 LELVVTGLYGKPFLSADRGLVLMPGENISLTCS----SAHIPFDRFSLAKEGELSLPQHQSGEHPANFSLGPVDLNVSGI 171 (218)
T ss_dssp EEEEEECSSCCCEEEESSCSEECTTCCCEEEEE----CSSSCCSEEEEEETTCSSCCSEEECSSSEEEECCSCCGGGCEE
T ss_pred EEEEEcCcccCCEEEeCCCCccCCCCCEEEEEe----CCCCCCCEEEEEECCCcccccccCCCccCEEEEccCCcccCEE
Confidence 444443 1122211110 12222222232 222334558999987644311 112234789999999999999
Q ss_pred EEEEEEcCC
Q psy7040 585 YTVTATNSQ 593 (716)
Q Consensus 585 ~~v~a~n~~ 593 (716)
|+|.|.|..
T Consensus 172 Y~C~a~n~~ 180 (218)
T 1uct_A 172 YRCYGWYNR 180 (218)
T ss_dssp EEEEEECTT
T ss_pred EEEEEEcCC
Confidence 999999864
No 443
>1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1
Probab=98.77 E-value=3.1e-08 Score=75.19 Aligned_cols=80 Identities=20% Similarity=0.295 Sum_probs=62.3
Q ss_pred CCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEE
Q psy7040 323 NQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAV 402 (716)
Q Consensus 323 ~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~ 402 (716)
.+|.+|.++.+.....+++.|+|.++..+ + .+.+|.|+.. + . ... .....++.+.+|.+++.|.|+|+|.
T Consensus 2 ~~P~~P~~l~~~~~~~~sv~L~W~~~~~~-~-~i~~Y~v~~~--~--~--~~~--~~~~~~~~~~~L~~~t~Y~~~V~A~ 71 (88)
T 1k85_A 2 MAPTAPTNLASTAQTTSSITLSWTASTDN-V-GVTGYDVYNG--T--A--LAT--TVTGTTATISGLAADTSYTFTVKAK 71 (88)
T ss_dssp CSCCCCEEEEEEEECSSCEEEEEECCSCC-S-SEEEEEEEES--S--S--EEE--EESSSEEEECCCCSSCEEEEEEEEE
T ss_pred cCcCCCCccEEEeccCCEEEEEECCCCCC-C-CccEEEEEEC--C--E--EEe--ecCCCEEEeCCCCCCCEEEEEEEEE
Confidence 35888999999999999999999997643 3 4899999841 1 1 111 2345789999999999999999999
Q ss_pred eCCCC-CCCCC
Q psy7040 403 NKGGP-GEPSD 412 (716)
Q Consensus 403 n~~g~-~~~s~ 412 (716)
|..|. +..|.
T Consensus 72 n~~G~~s~~S~ 82 (88)
T 1k85_A 72 DAAGNVSAASN 82 (88)
T ss_dssp ETTTEECCCCC
T ss_pred eCCCCcCCCCC
Confidence 99987 55544
No 444
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=98.77 E-value=1.7e-08 Score=89.04 Aligned_cols=129 Identities=12% Similarity=0.056 Sum_probs=86.5
Q ss_pred eeEEEccceeeeeccccceeEEEEcCCCCCCeEEEEEEEEcCCCCCccceeeeccCCCC---CCccceeeccceeEEEEE
Q psy7040 551 IKWIRTNDKRVTIDNVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTDKPS---APEGPIQWLLTLTDVTWE 627 (716)
Q Consensus 551 ~~w~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~~~~v~~~p~---~~~~~~~~~~~~v~l~w~ 627 (716)
+.|++.+.... .....+.|.++...+.+.|+|.|.|..+.. ...+.|..++. .+. .....+..+.
T Consensus 37 i~W~~~~~~~~-----~~~~~L~i~~v~~~d~G~Y~C~~~~~~~s~--~~~l~V~~~~~~~~~~~-~~~~~g~~~~---- 104 (176)
T 1f2q_A 37 TKWFHNGSLSE-----ETNSSLNIVNAKFEDSGEYKCQHQQVNESE--PVYLEVFSDWLLLQASA-EVVMEGQPLF---- 104 (176)
T ss_dssp CEEEETTEECS-----CCSSEEEECSCCGGGCEEEEEECTTSSCCC--CEEEEEECSSEEEEESC-SEEETTSCEE----
T ss_pred EEEEECCeECC-----CCceEEEEeccceecCEEEEEEcCCccccc--cEEEEEeCcceeecCCc-ceeeCCCCEE----
Confidence 66777665432 124889999999999999999998865433 23333432221 011 1111233444
Q ss_pred EeeEEEEeeeeccCce-e----eEEEEeCCeEeeecccceeeEEEEccCCCCCcEEEEEEEEcCCCC-ceeeEEEEEecC
Q psy7040 628 ISNYLQELHSSLMPIS-L----ESQYLMNDKRVTIDNVDYFTKITIRPLQRSDTAQYTVTATNSQGK-DQVFIEVVVTDK 701 (716)
Q Consensus 628 i~~y~v~~~~~~~~~~-~----~~~W~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~y~~~a~n~~G~-~~~s~~l~v~~~ 701 (716)
|.|.+. + .+.|+++|..+... .....|.|.++..+|+|.|+|.|.|..|. .+....|.|..+
T Consensus 105 ----------l~C~~~~~~p~~~~~W~~~g~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~ 172 (176)
T 1f2q_A 105 ----------LRCHGWRNWDVYKVIYYKDGEALKYW--YENHNISITNATVEDSGTYYCTGKVWQLDYESEPLNITVIKA 172 (176)
T ss_dssp ----------EEEEEGGGCCEEEEEEEETTEECCSC--CCSSEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEECS
T ss_pred ----------EEEEecCCCCceEEEEEECCEEEeee--cCCCeEEECCCCcccCEEEEEEEEeCCcceEecCEEEEEecC
Confidence 455553 2 88999999987532 23478999999999999999999997443 355688999887
Q ss_pred CC
Q psy7040 702 PS 703 (716)
Q Consensus 702 p~ 703 (716)
|.
T Consensus 173 p~ 174 (176)
T 1f2q_A 173 PR 174 (176)
T ss_dssp CC
T ss_pred CC
Confidence 65
No 445
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=98.77 E-value=1.1e-08 Score=79.73 Aligned_cols=63 Identities=17% Similarity=0.312 Sum_probs=52.8
Q ss_pred eccCcee----eEEEEeCCeEeeecc--------cceeeEEEEccCCCCCcEEEEEEEEcCCCCceeeEEEEEec
Q psy7040 638 SLMPISL----ESQYLMNDKRVTIDN--------VDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTD 700 (716)
Q Consensus 638 ~~~~~~~----~~~W~~~~~~~~~~~--------~~~~~~~~i~~l~~~~~y~y~~~a~n~~G~~~~s~~l~v~~ 700 (716)
|.|.+.| .+.|+++|+.+.... ......|.|.++...|+|.|+|.|.|..|..+.++.|.|+.
T Consensus 25 l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~ 99 (100)
T 3knb_A 25 VACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGNEFGSDSATVNIHIRS 99 (100)
T ss_dssp EEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEEEEecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEEEEECCCEEEEEEEEEEEE
Confidence 6666666 899999999886541 22336899999999999999999999999999999999875
No 446
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=98.77 E-value=4.1e-08 Score=91.81 Aligned_cols=136 Identities=15% Similarity=0.203 Sum_probs=97.7
Q ss_pred CCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccCCCeEE
Q psy7040 380 DTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKE 459 (716)
Q Consensus 380 ~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~ 459 (716)
....+.|.++...+.+.|+|.+.|..|....+ .........+.+|.+.........+..|..+.|.|.+.+.|.+.+.
T Consensus 70 ~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~--~~l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~ 147 (241)
T 3grw_A 70 QQWSLVMESVVPSDRGNYTCVVENKFGSIRQT--YTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQ 147 (241)
T ss_dssp GGTEEEECSCCGGGCEEEEEEEEETTEEEEEE--EEEEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCCEEE
T ss_pred cceEEEEEeCCcccCEEEEEEEeecCCceEEE--EEEEEeccCCCCceeecCCCccceecCCCEEEEEEEEecCCCCEEE
Confidence 45679999999999999999999977643211 1111112222344444444566778899999999999999999999
Q ss_pred EEe----CCeEeccCCcEEEE--------eCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEEEEEEE
Q psy7040 460 WLC----NDITIISKDRFKIV--------NDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVL 517 (716)
Q Consensus 460 W~~----~~~~~~~~~~~~~~--------~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v~ 517 (716)
|++ ++..+......... .......|.|.++...|.|.|+|.|.|..|....+..+.+.
T Consensus 148 W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 217 (241)
T 3grw_A 148 WLKHVEVNGSKVGPDGTPYVTVLKSWISESVEADVRLRLANVSERDGGEYLCRATNFIGVAEKAFWLSVH 217 (241)
T ss_dssp EEEECCSSSCSSCTTTCCCEEEEEEEECSBSEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEC-
T ss_pred EEEcccCCCcccCCCCceeeeeeeEeeeeecCCceEEEECcCCcccCcEEEEEEecCcceEEEEEEEEec
Confidence 999 77666543332111 11235679999999999999999999999998877766665
No 447
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=98.76 E-value=5.6e-08 Score=76.06 Aligned_cols=88 Identities=15% Similarity=0.240 Sum_probs=71.9
Q ss_pred CCcccccccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcC
Q psy7040 425 SPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNS 504 (716)
Q Consensus 425 ~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~ 504 (716)
+|.+.......+.+..|+.+.|.|.+. .|.+.+.|++++..+....++.+...+....|.|.++...|.|.|+|.|
T Consensus 7 ~p~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a--- 82 (100)
T 2yuv_A 7 GAAFAKILDPAYQVDKGGRVRFVVELA-DPKLEVKWYKNGQEIRPSTKYIFEHKGCQRILFINNCQMTDDSEYYVTA--- 82 (100)
T ss_dssp SCCEEECCCSCEEECTTEEEEEEEEES-CTTSCEEEEESSCBCCCBTTEEEEEETTEEEEEEEEECTTTCCEEEEEE---
T ss_pred CCeEEecCCCccEEcCCCcEEEEEEec-CCCceEEEEECCEECCCCCCEEEEecCCEEEEEEcCCCcCcCEEEEEEE---
Confidence 455543333346889999999999998 7899999999999998888888888888889999999999999999999
Q ss_pred CCceeeEEEEEEE
Q psy7040 505 WGTDKGTAKVTVL 517 (716)
Q Consensus 505 ~g~~~~s~~~~v~ 517 (716)
|....++.+.+.
T Consensus 83 -g~~~~~~~l~V~ 94 (100)
T 2yuv_A 83 -GDEKCSTELFVR 94 (100)
T ss_dssp -TTEEEEEEEEEC
T ss_pred -CCceEEEEEEEe
Confidence 555555555543
No 448
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=98.76 E-value=7.2e-09 Score=92.24 Aligned_cols=145 Identities=14% Similarity=0.105 Sum_probs=93.7
Q ss_pred EecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECC-CCCCCceeEEEEEEcCCCceeeEEEEEE
Q psy7040 438 VRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFD-SKRGDSGIYTLAVKNSWGTDKGTAKVTV 516 (716)
Q Consensus 438 ~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~-l~~~~~~~y~~~a~n~~g~~~~s~~~~v 516 (716)
...|+.+.|.|.+.+ + +.+.|++++..+... ....|.|.+ +...|.|.|+|.|.|..|.......+.+
T Consensus 11 ~~~G~~v~L~C~~~~-~-~~i~W~k~g~~l~~~---------~~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~v 79 (186)
T 1jbj_A 11 SISGTSVELTCPLDS-D-ENLKWEKNGQELPQK---------HDKHLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKARV 79 (186)
T ss_dssp EEETTEEEEECSSCC-C-TTCEEEETTEEECSC---------CCSEEEEESCCTTTSCEEEEEECSSCCCCCCEEECCCC
T ss_pred EeCCcEEEEEEeCCC-C-CceEEEECCEECCCC---------CCCEEEECCCCccccCEEEEEEEEeCCCcEEEEEEEEE
Confidence 467999999999987 4 349999999887553 133799999 9999999999999999988554444433
Q ss_pred EEEE-EEE----------e-CC----CCCC-------CCceeeEEEEEEecCCCceeeeEEEccceeeeeccccceeEEE
Q psy7040 517 LGCS-LKW----------N-PP----EDDG-------GAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDNVDYFTKIT 573 (716)
Q Consensus 517 ~~v~-l~W----------~-~p----~~~~-------~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~ 573 (716)
.... -.. . ++ .... .....+-.+...-.. +.+.+.|++.+...... ......+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~-p~p~i~W~k~g~~i~~~--~~~~~~L~ 156 (186)
T 1jbj_A 80 GSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGL-TDKTIKWLKDGSIISPL--NATKNTWN 156 (186)
T ss_dssp CSCCCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSS-SCSCEEEEETTEECCCS--SCCSSCCE
T ss_pred ecccccccccccccccccCCccccccccccccccccceecCCCCeEEEEeeC-CCCeEEEEECCEECccc--CCCcceEE
Confidence 2000 000 0 00 0000 000011111111111 34559999988765421 11347899
Q ss_pred EcCCCCCCeEEEEEEEEcCCCCC
Q psy7040 574 IRPLQRSDTAQYTVTATNSQGKD 596 (716)
Q Consensus 574 i~~L~~~~~y~~~v~a~n~~G~~ 596 (716)
|.++.+.+.+.|+|.|.|..|..
T Consensus 157 i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 157 LGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp EEETTSCCEEEEEEEESSCEEEE
T ss_pred ECCCCcCcCEEEEEEEEcCcCCc
Confidence 99999999999999999988754
No 449
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=98.75 E-value=1.2e-08 Score=81.93 Aligned_cols=69 Identities=14% Similarity=0.180 Sum_probs=59.1
Q ss_pred eccCcee----eEEEEeCCeEeeeccc-------------ceeeEEEEccCCCCCcEEEEEEEEcCCCCceeeEEEEEec
Q psy7040 638 SLMPISL----ESQYLMNDKRVTIDNV-------------DYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTD 700 (716)
Q Consensus 638 ~~~~~~~----~~~W~~~~~~~~~~~~-------------~~~~~~~i~~l~~~~~y~y~~~a~n~~G~~~~s~~l~v~~ 700 (716)
+.|.+.| .++|+++|+++..+.. .....|.|.++.+.|+|.|+|.|.|..|....++.|.|..
T Consensus 20 l~c~v~G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~~t~~l~v~~ 99 (126)
T 1he7_A 20 IPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFMD 99 (126)
T ss_dssp EEEEECCSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEEEEEEEECCCS
T ss_pred EEEEEeeeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeEEEEEEEEEEc
Confidence 7888888 9999999999876511 1236799999999999999999999999999999999998
Q ss_pred CCCCCC
Q psy7040 701 KPSAPE 706 (716)
Q Consensus 701 ~p~~p~ 706 (716)
.|.+..
T Consensus 100 ~P~~~~ 105 (126)
T 1he7_A 100 NPFEFN 105 (126)
T ss_dssp CTTSCC
T ss_pred CCCCCC
Confidence 887643
No 450
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=98.75 E-value=1.3e-07 Score=84.97 Aligned_cols=122 Identities=17% Similarity=0.225 Sum_probs=90.9
Q ss_pred CeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccCCC-eEEE
Q psy7040 382 PKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIP-TKEW 460 (716)
Q Consensus 382 ~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~-~~~W 460 (716)
..+.|.++...+...|+|.|.|..|..... .....+ ..+|.+.. .+....+..|..+.|.|.+.+.|.+ .+.|
T Consensus 68 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~--~~~l~V---~~~p~~~~-~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W 141 (195)
T 2c5d_C 68 SQLRITSLQLSDTGQYQCLVFLGHQTFVSQ--PGYVGL---EGLPYFLE-EPEDRTVAANTPFNLSCQAQGPPEPVDLLW 141 (195)
T ss_dssp EEEEESSCCSTTCEEEEEEEEETTEEEECC--CEEEEE---CCSCEEEE-CCCCEEECTTCCEEEEEEEECSSCCCEEEE
T ss_pred cEEEEEeccccCCcEEEEEEEeCCCceecc--cEEEEE---ecCCeEEc-CCCcEEEcCCCEEEEEeECCCCCCCCEEEE
Confidence 478899999999999999999976642111 111222 22455432 3445788899999999999999999 9999
Q ss_pred EeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCcee-eEEEEEE
Q psy7040 461 LCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDK-GTAKVTV 516 (716)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~-~s~~~~v 516 (716)
++++..+...... .....|.|.++. +.|.|+|.|.|..|... ..+.+.|
T Consensus 142 ~~~~~~~~~~~~~-----~~~~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 142 LQDAVPLATAPGH-----GPQRSLHVPGLN--KTSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp EESSCBSSSSTTS-----SCCEEEEECCCS--SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred EECCEeccCCCCc-----CCCCeEEEcccc--cCceEEEEEEcCCCceEEEEEEEEE
Confidence 9999887654432 345689999987 68999999999999774 5665554
No 451
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=98.75 E-value=1.3e-07 Score=73.05 Aligned_cols=79 Identities=19% Similarity=0.324 Sum_probs=68.4
Q ss_pred cccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEE
Q psy7040 433 LSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTA 512 (716)
Q Consensus 433 ~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~ 512 (716)
+..+.+..|..+.|.|.+ +.|.+.+.|++++..+....++.+...+....|.|.++...|.|.|+|.| |....++
T Consensus 15 ~~~~~v~~G~~v~l~C~~-~~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a----g~~~~~~ 89 (95)
T 2k1m_A 15 PRSVEVAAGSPAVFEAET-ERAGVKVRWQRGGSDISASNKYGLATEGTRHTLTVREVGPADQGSYAVIA----GSSKVKF 89 (95)
T ss_dssp CCCEEEETTSCEEEEEEC-SSSSCCCEEECSSSEECSSTTCEEEEETTEEEEEESSCCTTCCSEEEEEE----TTEEEEE
T ss_pred CCcEEEeCCCcEEEEEEe-CCCCCeEEEEECCEECCCCCcEEEEEcCCEEEEEEcCCCcccCEEEEEEE----CCceEEE
Confidence 457889999999999999 78889999999999998888888888888889999999999999999999 5555555
Q ss_pred EEEE
Q psy7040 513 KVTV 516 (716)
Q Consensus 513 ~~~v 516 (716)
.+.|
T Consensus 90 ~l~V 93 (95)
T 2k1m_A 90 DLKV 93 (95)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5554
No 452
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.75 E-value=7.4e-08 Score=75.68 Aligned_cols=79 Identities=14% Similarity=0.234 Sum_probs=66.9
Q ss_pred CCCcccccccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccC-CcEEEEeCCCeEEEEECCCCCCCceeEEEEEE
Q psy7040 424 VSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISK-DRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVK 502 (716)
Q Consensus 424 ~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~-~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~ 502 (716)
.+|.+.......+.+..|..+.|.|.+ +.|.+.+.|++++..+... .++.+...+....|.|.++...|.|.|+|.|.
T Consensus 14 ~~p~f~~~~~~~~~v~~G~~v~L~C~~-~~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 92 (104)
T 1pd6_A 14 KSTAFQKKLEPAYQVSKGHKIRLTVEL-ADHDAEVKWLKNGQEIQMSGSKYIFESIGAKRTLTISQCSLADDAAYQCVVG 92 (104)
T ss_dssp TTSSCSEECCSEEEEETTSCEEEEEEC-SSSSSCCEEEESSSEECCCSSSSEEEEETTEEEEEECSCSSSSCEEEEEEET
T ss_pred CCCEEEEcCCCcEEEecCCCEEEEEEE-cCCCCEEEEEECCEECCCCCCeEEEEecCCEEEEEECCCCcccCEEEEEEEC
Confidence 356665555555889999999999999 6888999999999998776 77777777778899999999999999999994
Q ss_pred c
Q psy7040 503 N 503 (716)
Q Consensus 503 n 503 (716)
|
T Consensus 93 ~ 93 (104)
T 1pd6_A 93 G 93 (104)
T ss_dssp T
T ss_pred C
Confidence 3
No 453
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=98.74 E-value=1.5e-07 Score=83.52 Aligned_cols=120 Identities=16% Similarity=0.202 Sum_probs=88.4
Q ss_pred CeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccCCC-eEEE
Q psy7040 382 PKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIP-TKEW 460 (716)
Q Consensus 382 ~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~-~~~W 460 (716)
..+.|.++...+...|+|.+.|..|..... .....+. .+|.+.. .+....+..|..+.|.|.+.+.|.+ .+.|
T Consensus 60 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~--~~~l~V~---~~p~~~~-~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W 133 (182)
T 1rhf_A 60 GFLSLKSVERSDAGRYWCQVEDGGETEISQ--PVWLTVE---GVPFFTV-EPKDLAVPPNAPFQLSCEAVGPPEPVTIVW 133 (182)
T ss_dssp EEEEESSCCGGGCEEEEEEESSCTTCEECC--CEEEEEE---CSCEEEE-CCCCEEECTTCCEEEEEEEECSSSCCEEEE
T ss_pred EEEEEeecCcccCeEEEEEEEcCCCcEEEE--EEEEEEe---cCCeEEe-cCcceEecCCCEEEEEeEecCCCCCCEEEE
Confidence 568899999999999999999875532111 1112222 2455442 2445788999999999999999999 9999
Q ss_pred EeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCcee-eEEEEEE
Q psy7040 461 LCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDK-GTAKVTV 516 (716)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~-~s~~~~v 516 (716)
++++..+..... ....|.|.++ .+.|.|+|.|.|..|... .++.+.|
T Consensus 134 ~~~~~~~~~~~~-------~~~~L~i~~~--~d~G~Y~C~a~N~~g~~~s~~~~l~V 181 (182)
T 1rhf_A 134 WRGTTKIGGPAP-------SPSVLNVTGV--TQSTMFSCEAHNLKGLASSRTATVHL 181 (182)
T ss_dssp EETTEECSCSEE-------SSEEEEECCC--SSCEEEEEEEEETTEEEECCCEEEEE
T ss_pred EcCCeECCCCCC-------CceEEEEecc--ccCeEEEEEEECCCCCcccceEEEEe
Confidence 999988754321 4568899988 478999999999999874 3665554
No 454
>3d85_D IL-12B, interleukin-12 subunit P40, cytotoxic lymphocyte; FAB, immune system/cytokine complex; 1.90A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 3d87_B* 3duh_A* 1f42_A* 1f45_A* 3hmx_A* 3qwr_A*
Probab=98.74 E-value=6.5e-07 Score=86.03 Aligned_cols=217 Identities=12% Similarity=0.060 Sum_probs=119.0
Q ss_pred cCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEEEEEEE--
Q psy7040 440 AGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVL-- 517 (716)
Q Consensus 440 ~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v~-- 517 (716)
.|..+.|.|.+... . .+.|.+++..... +.+.+|.|.++...+.|.|+|.| + |.....+.+.+.
T Consensus 20 ~G~~v~l~C~~~~~-~-~i~W~~~~~~~~~---------~~~~~L~i~~~~~~d~G~YtC~~-~--~~~~~~~~l~v~~~ 85 (306)
T 3d85_D 20 PGEMVVLTCDTPEE-D-GITWTLDQSSEVL---------GSGKTLTIQVKEFGDAGQYTCHK-G--GEVLSHSLLLLHKK 85 (306)
T ss_dssp CCEEEEEECSSSCC-S-SCEEEETTCCCCC---------EESSEEEEEECSGGGCEEEEEEE-T--TEEEEEEEEEEEEE
T ss_pred cCCcEEEECCCCCC-C-cCEEEECCccccC---------CCCCEEEEEecCcCCCceEEEee-C--CcccceEEEEEEec
Confidence 68899999988733 3 7999999875321 12348889999999999999999 2 444333222210
Q ss_pred -------------------------------EEEEEEeCCCCCCCCceeeEEEEEEecCCCceeeeEEEccceeeeec--
Q psy7040 518 -------------------------------GCSLKWNPPEDDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTID-- 564 (716)
Q Consensus 518 -------------------------------~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~-- 564 (716)
.+..+|.+..+ +.....|...... .. ..|...........
T Consensus 86 ~~~~~~t~i~~~~~~pp~~~~lsC~~~~~~~~~~C~W~pg~~--~~l~~~~~~~r~~-~~----~~~~~C~~~~~~~~~c 158 (306)
T 3d85_D 86 EDGIWSTDILKDQKEPKNKTFLRCEAKNYSGRFTCWWLTTIS--TDLTFSVKSSRGS-SD----PQGVTCGAATLSAERV 158 (306)
T ss_dssp ETTEECCCSSCCCC---CCCCCEEEBSSSSSEEEEEEEESCC--SSEEEEEEEEECS-SS----CEEEEECCCEEEEEEE
T ss_pred cCCcceeeeecccCCCCCCCcceEEcCCcccCcEEEecCCCC--CceeEEEEEEecC-CC----CcceECCCCCCCccce
Confidence 67788877543 1222334433211 11 12222111000000
Q ss_pred -cccce--eE--EEEcCCCCC----CeEEEEEEEEcCCCCCccceeeec-----cCCCCCCccceeecc-ceeEEEEEE-
Q psy7040 565 -NVDYF--TK--ITIRPLQRS----DTAQYTVTATNSQGKDQVFIEVVV-----TDKPSAPEGPIQWLL-TLTDVTWEI- 628 (716)
Q Consensus 565 -~~~~~--~~--~~i~~L~~~----~~y~~~v~a~n~~G~~~~s~~~~v-----~~~p~~~~~~~~~~~-~~v~l~w~i- 628 (716)
..... .. +.+..+-+. ..|.|+|.|.|..|.......+.+ |+||..+. +..+.. ..+.|+|.-
T Consensus 159 ~v~~~~~~~~~~c~~~~~cp~~~~~~~y~~~V~A~n~lg~~s~~~~f~~~~iVkPdPP~~l~-~~~~~~~~~l~vsW~~P 237 (306)
T 3d85_D 159 RGDNKEYEYSVECQEDSACPAAEESLPIEVMVDAVHKLKYEQYTSSFFIRDIIKPDPPKNLQ-LKPLKNSRQVEVSWEYP 237 (306)
T ss_dssp C--CEEEEEEEEEEETTCCTTSCCCSCEEEEEEEEETTEEEEEEEEECHHHHBCCCCCEEEE-EEEC----CEEEEEECC
T ss_pred eecCccccceeeeeeccccccccccEEEEEEEEEEccCCccccceEEEehhcEecCCCceEE-EEEecCCCcEEEEEcCC
Confidence 00000 11 123444444 489999999999986555443332 45554444 444333 789999991
Q ss_pred -----------eeEEEEeeeeccCceeeEEEEeCCeEeeecccceeeEEEEccCCCCCcEEEEEEEEcCCCCceee
Q psy7040 629 -----------SNYLQELHSSLMPISLESQYLMNDKRVTIDNVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVF 693 (716)
Q Consensus 629 -----------~~y~v~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~y~~~a~n~~G~~~~s 693 (716)
..|.|+|+... .-.|... ... ...++.|. ++..|.++|+|.|..|.+.+|
T Consensus 238 ~~~~~p~~~~~L~Y~vryr~~~-----~~~~~~~--~~~-----~~ts~~l~---~~~~Y~vqVRa~~~~~~G~WS 298 (306)
T 3d85_D 238 DTWSTPHSYFSLTFCVQVQGKS-----KREKKDR--VFT-----DKTSATVI---CRKNASISVRAQDRYYSSSWS 298 (306)
T ss_dssp TTSCSCTTTSCEEEEEEEECC-----------CE--EEE-----SSSEEEEC---CCSSCEEEEEEEESSSCCCCC
T ss_pred CCCcCCCceeeEEEEEEEEECC-----CCccEEE--eec-----cccEEEEe---CCCeEEEEEEeccCCCCCCCC
Confidence 37778776532 1123211 111 11345553 589999999999988877544
No 455
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.74 E-value=1.4e-07 Score=83.85 Aligned_cols=131 Identities=12% Similarity=0.132 Sum_probs=81.9
Q ss_pred eeEEEccceeeeeccccceeEEEEcCCCCCCeEEEEEEEEcCCCCCccceeeeccCCCCCCcc---ceeeccceeEEEEE
Q psy7040 551 IKWIRTNDKRVTIDNVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTDKPSAPEG---PIQWLLTLTDVTWE 627 (716)
Q Consensus 551 ~~w~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~~~~v~~~p~~~~~---~~~~~~~~v~l~w~ 627 (716)
..|++.+..............+.+. ...+.+.|+|.|.|. ......+.|..+|..... .....+..+.
T Consensus 32 ~~W~k~~~~l~~~~~~~~~~~l~i~--~~~d~G~Y~C~~~n~---~~~~~~l~V~~~P~~~~~~~~~~~~~g~~~~---- 102 (184)
T 3b5h_A 32 HRWLKGGVVLKEDALPGQKTEFKVD--SDDQWGEYSCVFLPE---PMGTANIQLHGPPRVKAVKSSEHINEGETAM---- 102 (184)
T ss_dssp EEEESSSEEEECTTCCCSEEEEEEC--GGGCCEEEEEEEEST---TSCEEEEEECCSCCCEESCSEEEECTTSCEE----
T ss_pred EEEEeCCEEeecccccCCcEEEEEe--chhhCeEEEEEEECC---cCcEEEEEEecCCceeecCCCcEEcCCCcEE----
Confidence 5666655444322222223566666 588999999999982 223344446555542210 1112234444
Q ss_pred EeeEEEEeeeeccCcee-----eEEEEe---CCeEeeec-c--------cceeeEEEEccCC-CCCcEEEEEEEEcCCCC
Q psy7040 628 ISNYLQELHSSLMPISL-----ESQYLM---NDKRVTID-N--------VDYFTKITIRPLQ-RSDTAQYTVTATNSQGK 689 (716)
Q Consensus 628 i~~y~v~~~~~~~~~~~-----~~~W~~---~~~~~~~~-~--------~~~~~~~~i~~l~-~~~~y~y~~~a~n~~G~ 689 (716)
|.|.+.| .+.|++ ++..+... . ......|.|.++. ..|.|.|+|.|.|..|.
T Consensus 103 ----------l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~N~~g~ 172 (184)
T 3b5h_A 103 ----------LVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGS 172 (184)
T ss_dssp ----------EEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEETTEEEEEECSCCTTTSSEEEEEEEEETTEE
T ss_pred ----------EEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecCCeeEEEEeeccccccCceEEEEEEeCCCc
Confidence 4454444 789999 55443322 1 1122589999999 99999999999999999
Q ss_pred ceeeEEEEEec
Q psy7040 690 DQVFIEVVVTD 700 (716)
Q Consensus 690 ~~~s~~l~v~~ 700 (716)
...+..|.|..
T Consensus 173 ~~~~~~l~V~~ 183 (184)
T 3b5h_A 173 DQAIITLRVRS 183 (184)
T ss_dssp EEEEEEEEEC-
T ss_pred ceEEEEEEEec
Confidence 99888888864
No 456
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=98.73 E-value=1.2e-07 Score=81.01 Aligned_cols=85 Identities=29% Similarity=0.411 Sum_probs=74.4
Q ss_pred cccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeC-CCeEEEEECCCCCCCceeEEEEEEcCCCceeeE
Q psy7040 433 LSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVND-DKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGT 511 (716)
Q Consensus 433 ~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~-~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s 511 (716)
+..+.+..|..+.|.|.+.+.|.+.+.|++++..+....++.+... .....|.|.++...|.|.|+|.|.|..|....+
T Consensus 48 ~~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~ 127 (154)
T 1fhg_A 48 ILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYTCKAVNSLGEATCT 127 (154)
T ss_dssp CCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEECTTCEEEEEESSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CCcEEEeCCCeEEEEEEEEEecCCEEEEEECCEECCCCCcEEEEECCCCeEEEEECCCChhcCEEEEEEEEECCCeEEEE
Confidence 4457899999999999999999999999999999988888877654 345799999999999999999999999988777
Q ss_pred EEEEEE
Q psy7040 512 AKVTVL 517 (716)
Q Consensus 512 ~~~~v~ 517 (716)
+.+.|.
T Consensus 128 ~~l~V~ 133 (154)
T 1fhg_A 128 AELLVE 133 (154)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 777666
No 457
>3mpc_A FN3-like protein; fibronectin, FN(III), unknown function; 1.60A {Clostridium thermocellum}
Probab=98.73 E-value=4.6e-08 Score=75.90 Aligned_cols=84 Identities=19% Similarity=0.278 Sum_probs=63.9
Q ss_pred CCCC--ceEEEE-eCCeEEEEecCCCCCCCCccceEEEEEEcCCCCcEEEecc-cCCCeEEecCCCCCcEEEEEEEEEec
Q psy7040 57 PEGP--LEVSNI-HKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETGVWIPVGK-TREPEMDVTGLTPGHEYKFRVKALNK 132 (716)
Q Consensus 57 p~~~--l~~~~~-~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~-~~~~~~~i~~L~~~~~y~~~v~a~~~ 132 (716)
|..| |.+... ..+++.|+|+++. .+.+|.|++....++.|..+.. ...++|+..+|.+|+.|.|+|+|+|.
T Consensus 5 P~aP~~l~a~~~~~~~~v~LsW~~~~-----~~~~Y~VyR~~~~~~~~~~i~~~~~~tsy~d~~l~~g~~Y~Y~V~Avn~ 79 (103)
T 3mpc_A 5 PAFPTGLSAVLDSSGNTANLTWNAAP-----GANSYNVKRSTKSGGPYTTIATNITSTNYTDTGVATGTKYYYVVSAVSN 79 (103)
T ss_dssp CCCCEEEEEEECTTSCCEEEEEECCT-----TCSEEEEEEESSTTCCCEEEEEEECSSEEEETTCCTTCCCEEEEEEEET
T ss_pred CCCCceeEEEEeCCCCEEEEEEECCC-----CCCEEEEEEecCCCCCcEEEeecCCCCEEEECCCCCCCEEEEEEEEEeC
Confidence 4445 444443 3579999999853 2789999888766667776654 45689999999999999999999998
Q ss_pred CccCCCccccceE
Q psy7040 133 EGESEPLETFSSI 145 (716)
Q Consensus 133 ~g~~~~s~~~~~~ 145 (716)
.|+|.+|......
T Consensus 80 ~geS~~S~~vs~~ 92 (103)
T 3mpc_A 80 GVETLNSAEAILQ 92 (103)
T ss_dssp TEECCCCCCEECB
T ss_pred cCCcCCCccEEEE
Confidence 8888887655443
No 458
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=98.73 E-value=1e-07 Score=85.14 Aligned_cols=85 Identities=16% Similarity=0.184 Sum_probs=67.1
Q ss_pred CCCCCceEEEEeCCeEEEEecCCCCCCCCccceEEEEEEcCCCCc-EEEec-ccCCCeEEecCCCCCcEEEEEEEEEecC
Q psy7040 56 DPEGPLEVSNIHKDGCTLKWNKPKDDGGEPLEGYLVEKYDPETGV-WIPVG-KTREPEMDVTGLTPGHEYKFRVKALNKE 133 (716)
Q Consensus 56 ~p~~~l~~~~~~~~s~~l~W~~p~~~~~~~i~~y~v~~~~~~~~~-~~~~~-~~~~~~~~i~~L~~~~~y~~~v~a~~~~ 133 (716)
.+|..+.+...+.+++.|+|++|. ..+.+|+|.|...+... ..... ....++++|.+|.|++.|.|+|+|.+..
T Consensus 105 ~~P~~l~v~~~t~~si~l~W~~p~----~~i~~Y~v~y~~~~~~~~~~~~~v~~~~t~~~l~gL~p~t~Y~~~V~A~~~~ 180 (195)
T 2qbw_A 105 SVPTNLEVVAATPTSLLISWDASY----YGVSYYRITYGETGGNSPVQEFTVPYSSSTATISGLKPGVDYTITVYAYSDY 180 (195)
T ss_dssp CSSCCCEEEEEETTEEEEECCCCC----SSCSEEEEEEEETTCCSCCEEEEEETTCSEEEECSCCTTCEEEEEEEEESST
T ss_pred CCCcccEEEeCCCCEEEEEEeCCC----CCccEEEEEEEECCCCCcceEEEeCCCCCEEEeCCCCCCCEEEEEEEEEeCC
Confidence 456678999999999999999985 23899999987765433 22222 2335899999999999999999999999
Q ss_pred ccCCCccccce
Q psy7040 134 GESEPLETFSS 144 (716)
Q Consensus 134 g~~~~s~~~~~ 144 (716)
|.+..|.....
T Consensus 181 G~g~~S~~v~~ 191 (195)
T 2qbw_A 181 YGSHHYSPISI 191 (195)
T ss_dssp TSSCBCCCEEE
T ss_pred ccCCCCCCEEE
Confidence 99988765544
No 459
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=98.73 E-value=5.8e-08 Score=88.63 Aligned_cols=134 Identities=13% Similarity=0.005 Sum_probs=89.3
Q ss_pred CCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccC--CCeE
Q psy7040 381 TPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEP--IPTK 458 (716)
Q Consensus 381 ~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p--~~~~ 458 (716)
...+.|.++...+.+.|+|.|.|..+. ..+... ...... ..+|.+.......+.+..|+.+.|.|.+.+.| .+.+
T Consensus 63 ~~~l~I~~v~~~D~G~Y~C~a~n~~~~-~~s~~~-~l~v~~-~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i 139 (213)
T 2x1w_L 63 KKGFTIPSYMISYAGMVFCEAKINDES-YQSIMY-IVVVVG-YRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDF 139 (213)
T ss_dssp TTEEEEEGGGTTTCSEEEEEEC----C-EECCCE-EEEECB-CCEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEE
T ss_pred CccEEEccCChhcCceEEEEEEECCee-EEEEEE-EEEEeC-CcccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEE
Confidence 456899999999999999999884332 222211 111211 22444443444556899999999999999855 4579
Q ss_pred EEEeCCeEeccCCc-EEEEe-------CCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEEEEEEE
Q psy7040 459 EWLCNDITIISKDR-FKIVN-------DDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVL 517 (716)
Q Consensus 459 ~W~~~~~~~~~~~~-~~~~~-------~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v~ 517 (716)
.|++++..+..... ..... ......|.|.++...|.|.|+|.|.|..|..+.++.+.|.
T Consensus 140 ~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~ 206 (213)
T 2x1w_L 140 NWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVH 206 (213)
T ss_dssp EEECSCSSCCSEEEEEEEECCCSSCSCEEEEEEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred EEEecCCccceEEEeccccccccCccceeeeEEEEECCCCcccCEEEEEEEecCCCcEEEEEEEEEe
Confidence 99998876422111 00000 1123479999999999999999999999998877777665
No 460
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=98.72 E-value=3.8e-07 Score=85.53 Aligned_cols=168 Identities=13% Similarity=0.124 Sum_probs=101.1
Q ss_pred cccEEEecCCeEEEEEEEeccCCCe-----EEEEeCCeEeccC--------CcEE-------EE---eCCCeEEEEECCC
Q psy7040 433 LSDIKVRAGSNFEFDINVIGEPIPT-----KEWLCNDITIISK--------DRFK-------IV---NDDKSTKLKVFDS 489 (716)
Q Consensus 433 ~~~~~~~~g~~~~~~~~v~~~p~~~-----~~W~~~~~~~~~~--------~~~~-------~~---~~~~~~~l~i~~l 489 (716)
+..+.+..|+.+.|.|.+.+.|.+. +.|++++...... .... +. ......+|.|.++
T Consensus 10 p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v 89 (248)
T 3pv7_A 10 GGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPGI 89 (248)
T ss_dssp TSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESSC
T ss_pred CCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCCC
Confidence 3456789999999999999888776 9999864322100 0000 00 0112345999999
Q ss_pred CCCCceeEEEEEEcCCCceeeEEEEEEE---EEEEEEeCCCCCCCCceeeEEEEEEecCCCce-eeeEEEccceee----
Q psy7040 490 KRGDSGIYTLAVKNSWGTDKGTAKVTVL---GCSLKWNPPEDDGGAPIEYYMVEKMETDTGKV-LIKWIRTNDKRV---- 561 (716)
Q Consensus 490 ~~~~~~~y~~~a~n~~g~~~~s~~~~v~---~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~-~~~w~~~~~~~~---- 561 (716)
...|.|.|+|.+.|..+.......+.+. .+.+.=......++.....|.+... .+.+ .+.|++.+....
T Consensus 90 ~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~P~v~~~~~~~~~~~~~~~L~C~~~g~---~P~pi~v~W~k~g~~l~~~~~ 166 (248)
T 3pv7_A 90 QLEEAGEYRCEVVVTPLKAQGTVQLEVVASPASRLLLDQVGMKENEDKYMCESSGF---YPEAINITWEKQTQKFPHPIE 166 (248)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEEEEEEBCCEEEEECC--------CEEEEEEEEE---BSSCCEEEEEEECSSSCSCEE
T ss_pred CHHHCeEEEEEEEeCCccceeEEEEEEecCCceEEecCCccccCCCcEEEEEEccE---ECCCeEEEEEECCccCCCccc
Confidence 9999999999999998877777777776 3333211111222333445555431 1233 499999874211
Q ss_pred ---------eecccc----ceeEEEEcCCCCCCeEEEEEEEEcCCCCCccceeee
Q psy7040 562 ---------TIDNVD----YFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVV 603 (716)
Q Consensus 562 ---------~~~~~~----~~~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s~~~~ 603 (716)
.....+ ....+.+.....++.+.|+|.|.|..+.......+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~~~~~~~~~~v~ 221 (248)
T 3pv7_A 167 ISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHASLHTPLRSNFT 221 (248)
T ss_dssp ECTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEECTTCSSCEEEEEC
T ss_pred cccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEECCCCCCCcEEEEE
Confidence 000011 123466666777788899999999988766555554
No 461
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=98.72 E-value=1.8e-07 Score=74.39 Aligned_cols=86 Identities=20% Similarity=0.294 Sum_probs=66.4
Q ss_pred ccccEEEecCCeEEEEEEEeccCC---CeEEEEeCCeEecc---CCcEEEEeC------CCeEEEEECCCCCCCceeEEE
Q psy7040 432 QLSDIKVRAGSNFEFDINVIGEPI---PTKEWLCNDITIIS---KDRFKIVND------DKSTKLKVFDSKRGDSGIYTL 499 (716)
Q Consensus 432 ~~~~~~~~~g~~~~~~~~v~~~p~---~~~~W~~~~~~~~~---~~~~~~~~~------~~~~~l~i~~l~~~~~~~y~~ 499 (716)
.+..+.+..|..+.|.|.+.+.|. +.+.|++++..... ..++.+... .....|.|.++.+.|.|.|+|
T Consensus 10 ~p~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 89 (108)
T 3cx2_A 10 RPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPAFTGSYRC 89 (108)
T ss_dssp CCCCEEEETTCCEEEEEEEECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGGGCEEEEE
T ss_pred CCCcEEEeCCCCEEEEEEECCCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCccCEEEEE
Confidence 345688999999999999999998 99999998732211 233443211 124689999999999999999
Q ss_pred EEEcCCCceeeEEEEEEE
Q psy7040 500 AVKNSWGTDKGTAKVTVL 517 (716)
Q Consensus 500 ~a~n~~g~~~~s~~~~v~ 517 (716)
.|.|..|....++.+.|.
T Consensus 90 ~a~N~~G~~~~~~~L~V~ 107 (108)
T 3cx2_A 90 EVSTKDKFDCSNFNLTVH 107 (108)
T ss_dssp EEECSSCEEEEEEEEEEE
T ss_pred EEecCCCceEEEEEEEEe
Confidence 999999999888887764
No 462
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=98.72 E-value=7.9e-08 Score=75.51 Aligned_cols=78 Identities=19% Similarity=0.345 Sum_probs=63.1
Q ss_pred cCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEE--eCC---CeEEEEECCCCCCCceeEEEEEEcCCCceeeEEEE
Q psy7040 440 AGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIV--NDD---KSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKV 514 (716)
Q Consensus 440 ~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~--~~~---~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~ 514 (716)
.+..+.+.|.+.|.|.|.+.|++++..+......... ..+ ....|.|.++...|.|.|+|.|.|..|....++.+
T Consensus 15 ~~~~~~~~c~v~G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~~~l 94 (103)
T 1wwb_X 15 SDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISA 94 (103)
T ss_dssp CCCEEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEE
T ss_pred ECcEEEEEEEEEEeCCCEEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEEEEEEEeCCCcEeEEEEE
Confidence 4667899999999999999999999998876654222 111 23459999999999999999999999998887776
Q ss_pred EEE
Q psy7040 515 TVL 517 (716)
Q Consensus 515 ~v~ 517 (716)
.+.
T Consensus 95 ~V~ 97 (103)
T 1wwb_X 95 HFM 97 (103)
T ss_dssp CCS
T ss_pred EEC
Confidence 653
No 463
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=98.72 E-value=2.1e-08 Score=78.79 Aligned_cols=67 Identities=18% Similarity=0.248 Sum_probs=56.0
Q ss_pred eccCcee----eEEEEeCCeEeeeccc-----------ceeeEEEEccCCCCCcEEEEEEEEcCCCCceeeEEEEEecCC
Q psy7040 638 SLMPISL----ESQYLMNDKRVTIDNV-----------DYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTDKP 702 (716)
Q Consensus 638 ~~~~~~~----~~~W~~~~~~~~~~~~-----------~~~~~~~i~~l~~~~~y~y~~~a~n~~G~~~~s~~l~v~~~p 702 (716)
+.|.+.| .+.|+++|+.+..+.. .....|.|.++...|+|.|+|.|.|..|....++.|.|..+|
T Consensus 21 ~~c~v~G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~V~~~P 100 (103)
T 1wwb_X 21 IPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISAHFMGWP 100 (103)
T ss_dssp EEEEEECSSCCEEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECCSCCC
T ss_pred EEEEEEEeCCCEEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEEEEEEEeCCCcEeEEEEEEECCCC
Confidence 6777777 9999999998876521 122459999999999999999999999999999999998877
Q ss_pred CC
Q psy7040 703 SA 704 (716)
Q Consensus 703 ~~ 704 (716)
.+
T Consensus 101 ~~ 102 (103)
T 1wwb_X 101 GI 102 (103)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 464
>2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1
Probab=98.72 E-value=3.9e-07 Score=84.23 Aligned_cols=92 Identities=15% Similarity=0.165 Sum_probs=69.7
Q ss_pred CCCCCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCCCCCeEEccccCcccceEEEcCCCCCCeEEEEEEEE
Q psy7040 222 KPSPPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEATGRWTPAGETEGPVTGLEVEGLIPNHKYKFRVRAV 301 (716)
Q Consensus 222 ~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~ 301 (716)
+|.||.+ +.+.......+.|+|+.|.. . ....|.|+++......|..... .....+.|.+|.|++.|.|+|+|.
T Consensus 136 kP~PP~n-l~v~~~~~~~l~l~W~~P~~-~--~~L~Yevry~~~~~~~W~~~~~--~~~~~~~l~~L~p~~~Y~vqVR~k 209 (247)
T 2erj_C 136 IPWAPEN-LTLHKLSESQLELNWNNRFL-N--HCLEHLVQYRTDWDHSWTEQSV--DYRHKFSLPSVDGQKRYTFRVRSR 209 (247)
T ss_dssp ECCCCEE-EEEEESSSSCEEEEEECSSC-C--TTEEEEEEEECSSCSSCEEEEE--CSSCEEEESCCCTTSCEEEEEEEE
T ss_pred EeCCCCe-EEEEECCCCcEEEEECCCCC-C--CcEEEEEEEeeCCCCCCEEEec--CCceEEEecCCCCCCEEEEEEEEE
Confidence 6888887 88887767799999998752 1 2458999999877778886543 346789999999999999999999
Q ss_pred cCCC---CCCCCcccceEEec
Q psy7040 302 NKQG---KSEPLTTTASIEAK 319 (716)
Q Consensus 302 n~~g---~~~~~~~~~~~~~~ 319 (716)
...| .+.+|..+..+...
T Consensus 210 ~~~~~~~~g~WSeWS~~~~~~ 230 (247)
T 2erj_C 210 FNPLCGSAQHWSEWSHPIHWG 230 (247)
T ss_dssp ECSSSCCCCCCCCCCCCEEEC
T ss_pred eCCCCCCCCccCCCCcCEEEE
Confidence 8643 44556665545544
No 465
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=98.72 E-value=1.9e-08 Score=78.92 Aligned_cols=83 Identities=25% Similarity=0.334 Sum_probs=67.1
Q ss_pred ccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcE-EEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEE
Q psy7040 434 SDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRF-KIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTA 512 (716)
Q Consensus 434 ~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~-~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~ 512 (716)
..+.+..|..+.|.|.+.+.|.+.+.|++++..+...... ..........|.|.++...|.|.|+|.|.|..|....++
T Consensus 16 ~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~ 95 (100)
T 3caf_A 16 RLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTY 95 (100)
T ss_dssp CEEEECTTCCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred cEEEecCCCEEEEEEEccccCCCEEEEEECCEEcccccccccEEEecCeEEEEEccCCcCCCEEEEEEEEeCCCEEEEEE
Confidence 4678899999999999999999999999999887654321 111222345899999999999999999999999988777
Q ss_pred EEEE
Q psy7040 513 KVTV 516 (716)
Q Consensus 513 ~~~v 516 (716)
.+.+
T Consensus 96 ~l~V 99 (100)
T 3caf_A 96 HLDV 99 (100)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7665
No 466
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=98.72 E-value=8.8e-08 Score=87.37 Aligned_cols=116 Identities=15% Similarity=0.170 Sum_probs=74.8
Q ss_pred eEEEEcCCCCCCeEEEEEEEEcCCCC--CccceeeeccCCC-CCCccceee-------ccceeEEEEEEeeEEEEeeeec
Q psy7040 570 TKITIRPLQRSDTAQYTVTATNSQGK--DQVFIEVVVTDKP-SAPEGPIQW-------LLTLTDVTWEISNYLQELHSSL 639 (716)
Q Consensus 570 ~~~~i~~L~~~~~y~~~v~a~n~~G~--~~~s~~~~v~~~p-~~~~~~~~~-------~~~~v~l~w~i~~y~v~~~~~~ 639 (716)
..+.|.+++..+.+.|.|.|.|..|. ......+.|...+ ..|. +... .+..+.|.+.+.++.-
T Consensus 68 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~P~-v~~~~~~~~~~~g~~v~l~C~~~g~~p------ 140 (211)
T 3tv3_L 68 ASLTVSGLQTDDEAVYYCGSLVGNWDVIFGGGTKLTVLGQPKAAPS-VTLFPPSSEELQANKATLVCLISDFYP------ 140 (211)
T ss_dssp EEEEEESCCGGGCEEEEEEEEETTTEEEECCCEEEEECCSCCBCCE-EEEECCCHHHHHTTCEEEEEEEEEEBS------
T ss_pred EEEEECCCChhHCEEEEEEEecCCCceeECCCceEEEeCCCCcCCe-eEecCCchhhhcCCCeEEEEEeeeecC------
Confidence 78999999999999999999998772 2223334444222 3333 2221 2455665554333210
Q ss_pred cCceeeEEEEeCCeEeeec------------ccceeeEEEEccCCCCCcEEEEEEEEcCCCCceeeE
Q psy7040 640 MPISLESQYLMNDKRVTID------------NVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFI 694 (716)
Q Consensus 640 ~~~~~~~~W~~~~~~~~~~------------~~~~~~~~~i~~l~~~~~y~y~~~a~n~~G~~~~s~ 694 (716)
..-.+.|+++|..+... .......|.|..+..+|.|.|+|.|.|..|....+.
T Consensus 141 --~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~~~~~~~ 205 (211)
T 3tv3_L 141 --GAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTV 205 (211)
T ss_dssp --SCCEEEEEETTEEECTTEEECCCEECTTSSEEEEEEEEECHHHHHHSSCEEEEEEETTEEEEEEE
T ss_pred --CCeEEEEEECCeecCCCcccCCceECCCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCCCEEeec
Confidence 00178999999988542 001125688999888899999999999887554443
No 467
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.71 E-value=5.2e-08 Score=76.14 Aligned_cols=88 Identities=30% Similarity=0.433 Sum_probs=70.6
Q ss_pred CCcccccccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcC
Q psy7040 425 SPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNS 504 (716)
Q Consensus 425 ~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~ 504 (716)
+|.+.. .+..+.+..|+.+.|.|.+.+.|.+.+.|++++..+...... .......|.|.++.+.|.|.|+|.|.|.
T Consensus 11 ~P~~~~-~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~---~~~~~~~L~i~~v~~~D~G~Y~C~a~N~ 86 (99)
T 2yr3_A 11 APSFSS-VLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYARST---CEAGVAELHIQDALPEDHGTYTCLAENA 86 (99)
T ss_dssp EEEEEE-CCCCEEECTTCCEEEECEEEEESCCCCEEEESSSBCSSCCCE---EETTEEEEEECSCCTTCCBCEEEEEECS
T ss_pred CCceee-cCCCCEEeCCCeEEEEEEEeeeCCCeEEEEECCEECcccceE---eeCCeEEEEECCCChhhCEEEEEEEEEC
Confidence 444432 245678999999999999999999999999999887644322 2344678999999999999999999999
Q ss_pred CCceeeEEEEEE
Q psy7040 505 WGTDKGTAKVTV 516 (716)
Q Consensus 505 ~g~~~~s~~~~v 516 (716)
.|....++.+.|
T Consensus 87 ~g~~~~~~~l~V 98 (99)
T 2yr3_A 87 LGQVSCSAWVTV 98 (99)
T ss_dssp SCEEEEECCEEE
T ss_pred CCeEEEEEEEEE
Confidence 998877766655
No 468
>2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A
Probab=98.71 E-value=3.7e-08 Score=74.62 Aligned_cols=78 Identities=12% Similarity=0.264 Sum_probs=63.2
Q ss_pred CCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEEeCCCC
Q psy7040 328 PGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGP 407 (716)
Q Consensus 328 p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~ 407 (716)
...+++..++.++++|+|.+|. +.+.+|+|.|...+..........++...++.|.+|.|++.|.++|.|.+..+.
T Consensus 9 ~~~l~vt~vt~~S~~lsW~~p~----~~v~~Y~I~y~~~~g~~~~~~~~v~g~~~s~~l~~L~PgT~Y~V~v~a~~~~~~ 84 (95)
T 2h41_A 9 ATSESVTEITASSFVVSWVSAS----DTVSGFRVEYELSEEGDEPQYLDLPSTATSVNIPDLLPGRKYIVNVYQISEDGE 84 (95)
T ss_dssp TCTTSCCCCGGGCEEEECCCSC----TTEEEEEEEEEETTTCCCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEETTSC
T ss_pred EEEEEEEEeCCCeEEEEECCCC----CCccEEEEEEEeCCCCCcceEEECCCCccEEEECCCCCCCEEEEEEEEEcCCCc
Confidence 3457788889999999999864 369999999998764433334556788999999999999999999999997765
Q ss_pred CC
Q psy7040 408 GE 409 (716)
Q Consensus 408 ~~ 409 (716)
+.
T Consensus 85 S~ 86 (95)
T 2h41_A 85 QS 86 (95)
T ss_dssp EE
T ss_pred cc
Confidence 53
No 469
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.71 E-value=6.8e-08 Score=75.65 Aligned_cols=89 Identities=21% Similarity=0.343 Sum_probs=70.4
Q ss_pred CCcccccccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEecc-CCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEc
Q psy7040 425 SPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIIS-KDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKN 503 (716)
Q Consensus 425 ~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~-~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n 503 (716)
+|.+. ..+..+.+..|..+.|.|.+.+.|.+.+.|++++..+.. ..++.+.. ...|.|.++...|.|.|+|.|.|
T Consensus 8 ~P~i~-~~p~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~---~~~L~i~~v~~~d~G~Y~C~a~n 83 (100)
T 2edj_A 8 PPIIL-QGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQE---QGTLQIKNLRISDTGTYTCVATS 83 (100)
T ss_dssp SCEEE-ECCCCEEEESSSEEEECCEEECSSCCEEEEEESSSEESSSCSSCEECT---TCCEEEESCCTTTCCEEEEEEEC
T ss_pred CCEEE-eCcCCEEEcCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCCEEEcC---CCEEEEccCCcccCEEEEEEEEc
Confidence 44443 234567899999999999999999999999999988763 33333322 23699999999999999999999
Q ss_pred CCCceeeEEEEEEE
Q psy7040 504 SWGTDKGTAKVTVL 517 (716)
Q Consensus 504 ~~g~~~~s~~~~v~ 517 (716)
..|....++.+.|.
T Consensus 84 ~~g~~~~~~~l~V~ 97 (100)
T 2edj_A 84 SSGETSWSAVLDVT 97 (100)
T ss_dssp SSCCCBCCEEEEEE
T ss_pred CCCCEEEEEEEEEe
Confidence 99988777766654
No 470
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=98.70 E-value=1.1e-07 Score=87.30 Aligned_cols=131 Identities=10% Similarity=0.073 Sum_probs=89.3
Q ss_pred CCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccCCCeEEE
Q psy7040 381 TPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEW 460 (716)
Q Consensus 381 ~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W 460 (716)
..++.|.++...+.+.|.|.+.+..+........ ..... ++...........+..+..+.+.|.+.+.|.+.+.|
T Consensus 78 ~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~~~~~~c~~~g~p~p~i~W 152 (218)
T 4frw_A 78 DGSVLLRNAVQADEGEYECRVSTFPAGSFQARLR--LRVLV---PPLPSLNPGPALEEGQGLTLAASCTAEGSPAPSVTW 152 (218)
T ss_dssp BCCEEESSCCGGGCEEEEEEEEEETTEEEEEEEE--EEEEB---CCCCEEEECSCEETTCCSEEEEEEEEEEBSCCEEEE
T ss_pred eEEEEEeeccHHHCCceeEEEEeccCceeeeEEE--EEEee---eccceeeeeeeeeeeeccccceeeeccCCcCceEEE
Confidence 3568999999999999999998876543221111 11111 222122223445667788999999999999999999
Q ss_pred EeCCeEeccCCcEEEEeC-CCeEEEEECCCCCCCceeEEEEEEcCCCceeeEEEEEE
Q psy7040 461 LCNDITIISKDRFKIVND-DKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTV 516 (716)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~-~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v 516 (716)
++++..+........... .....|.|.++...|.|.|+|.|.|..|..+....+.+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~v 209 (218)
T 4frw_A 153 DTEVKGTTSSRSFKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHIL 209 (218)
T ss_dssp EESSCCEEEEEEEECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEEC
T ss_pred EECCcccccCceEecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEEE
Confidence 999877643322211100 01347999999999999999999999998776655443
No 471
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=98.70 E-value=4.2e-08 Score=92.31 Aligned_cols=127 Identities=9% Similarity=0.036 Sum_probs=88.6
Q ss_pred CCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCC--CCceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccCCCeE
Q psy7040 381 TPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDP--TAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTK 458 (716)
Q Consensus 381 ~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~--~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~ 458 (716)
...+.|.++...+...|+|.+.|..+....... .....+...+.+|.+.......+.+..|..+.|.|.+.+.|.+.+
T Consensus 89 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~~g~p~p~v 168 (250)
T 2fbo_J 89 APTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCTDCANANV 168 (250)
T ss_dssp SCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCEESCTTCEE
T ss_pred cceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEecCCCCCee
Confidence 457999999999999999999988764322110 111222222334444444455677888999999999999999999
Q ss_pred EEEeCCeEeccCCcE--EEE-------------------eCCCeEEEEECCCCCCCceeEEEEEEcCCCc
Q psy7040 459 EWLCNDITIISKDRF--KIV-------------------NDDKSTKLKVFDSKRGDSGIYTLAVKNSWGT 507 (716)
Q Consensus 459 ~W~~~~~~~~~~~~~--~~~-------------------~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~ 507 (716)
.|++++..+...... ... .......|.|.++...|.|.|+|.|.|..|.
T Consensus 169 ~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~ 238 (250)
T 2fbo_J 169 TWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCELATGQGE 238 (250)
T ss_dssp EEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGGCEEEEEEEESSSSG
T ss_pred EEEeCCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcccCEEEEEEecCCccc
Confidence 999998766432211 100 0002258999999999999999999996553
No 472
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.70 E-value=6.4e-08 Score=76.13 Aligned_cols=73 Identities=21% Similarity=0.347 Sum_probs=64.8
Q ss_pred cccccEEEecCCeEEEEEEEeccCCC-eEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEc
Q psy7040 431 DQLSDIKVRAGSNFEFDINVIGEPIP-TKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKN 503 (716)
Q Consensus 431 ~~~~~~~~~~g~~~~~~~~v~~~p~~-~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n 503 (716)
..+.++.+.+|+.+.|.|.+.+.|.+ .+.|++++..+....++.+..++....|.|.++..+|.|.|+|.|.|
T Consensus 13 ~~~~~~~v~~G~~v~l~C~v~~~~~~~~v~W~k~g~~i~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 86 (104)
T 2eny_A 13 KRLKTMEVLEGESCSFECVLSHESASDPAMWTVGGKTVGSSSRFQATRQGRKYILVVREAAPSDAGEVVFSVRG 86 (104)
T ss_dssp BCCCCEEEESSCCEEEEEECSSCCCSSCBCCBSSSSBCSBCSSCEEEEETTEEEEEECSCCTTTCSCEEEEETT
T ss_pred ecCCCcEEcCCCcEEEEEEEcCCCCCceeEEEECCEECCCCCCEEEEEcCCEEEEEECCCCHHHCEEEEEEECC
Confidence 44567899999999999999988754 79999999999888888888888888999999999999999999854
No 473
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=98.69 E-value=1.8e-08 Score=91.94 Aligned_cols=123 Identities=14% Similarity=0.170 Sum_probs=87.9
Q ss_pred CeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEE-eccCCCeEEE
Q psy7040 382 PKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINV-IGEPIPTKEW 460 (716)
Q Consensus 382 ~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v-~~~p~~~~~W 460 (716)
..+.|.++...+.+.|+|.+.|..|....+... ...... +|.+... .....+..|..+.|.|.+ .+.|.+.+.|
T Consensus 68 ~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~-~l~V~~---~p~~~~~-~~~~~~~~g~~~~l~C~~~~~~p~~~v~W 142 (209)
T 1nbq_A 68 TGITFKSVTREDTGTYTCMVSEEGGNSYGEVKV-KLIVLV---PPSKPTV-NIPSSATIGNRAVLTCSEQDGSPPSEYTW 142 (209)
T ss_dssp TEEECSCCCTTSCSEEEEEEEETTSSCEECCEE-ECCEEB---CCCCCCC-CCBSEEETTSCEEECCCCCSCBSCCEEEE
T ss_pred cEEEEeeCCHHHCcEEEEEEecCCCCccceEEE-EEEEec---CCcCCCc-ccccceecCCEEEEEEeCCCCCCCceeEE
Confidence 678999999999999999999987632222111 111112 2332211 223468899999999997 9999999999
Q ss_pred EeCCeEeccCCcE-------EEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCcee
Q psy7040 461 LCNDITIISKDRF-------KIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDK 509 (716)
Q Consensus 461 ~~~~~~~~~~~~~-------~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~ 509 (716)
++++..+...... ..........|.|.++...|.|.|+|.|.|..|...
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 198 (209)
T 1nbq_A 143 FKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPM 198 (209)
T ss_dssp EETTCCCCSCSSSSSSCTTCCCCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCCE
T ss_pred EECCeeCCCccccceeeeccceEEcCCcceEEEEeccccCCeEEEEEEeCCcCccc
Confidence 9999877643321 111222456899999999999999999999999873
No 474
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.69 E-value=9.2e-08 Score=75.85 Aligned_cols=87 Identities=23% Similarity=0.316 Sum_probs=66.9
Q ss_pred cccccEEEecCCeEEEEEEEecc---CCCeEEEEeCCe-Eecc--CCcEEEEe--CC----CeEEEEECCCCCCCceeEE
Q psy7040 431 DQLSDIKVRAGSNFEFDINVIGE---PIPTKEWLCNDI-TIIS--KDRFKIVN--DD----KSTKLKVFDSKRGDSGIYT 498 (716)
Q Consensus 431 ~~~~~~~~~~g~~~~~~~~v~~~---p~~~~~W~~~~~-~~~~--~~~~~~~~--~~----~~~~l~i~~l~~~~~~~y~ 498 (716)
..+.++.+.+|..+.|.|.+.+. |.|.+.|+|+.. .+.. ..++.+.. .. ....|.|.++.+.|.|.|+
T Consensus 17 ~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 96 (118)
T 2edn_A 17 KKPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLGDRGYYR 96 (118)
T ss_dssp BCCCCCEEETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCTTTCSCEE
T ss_pred ECCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCChhhCEEEE
Confidence 33567889999999999999886 789999999741 1111 23333322 11 2578999999999999999
Q ss_pred EEEEcCCCceeeEEEEEEE
Q psy7040 499 LAVKNSWGTDKGTAKVTVL 517 (716)
Q Consensus 499 ~~a~n~~g~~~~s~~~~v~ 517 (716)
|.|.|..|..+..+.+.|.
T Consensus 97 Cevsn~~g~~s~~~~L~V~ 115 (118)
T 2edn_A 97 LEVKAKDTCDSCGFNIDVE 115 (118)
T ss_dssp EEEECSSCEEEEEECCEEE
T ss_pred EEEEEcCCcEEEEEEEEEE
Confidence 9999999998888877764
No 475
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=98.69 E-value=2e-07 Score=83.90 Aligned_cols=124 Identities=10% Similarity=0.018 Sum_probs=84.2
Q ss_pred CCCCeEEecCCCCCCeEEEEEEEEeCC-CCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccCCCe
Q psy7040 379 GDTPKGKVLDLIEGNQYEFRVLAVNKG-GPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPT 457 (716)
Q Consensus 379 ~~~~~~~i~~l~~~~~Y~~~v~a~n~~-g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~ 457 (716)
.....+.|.++...+.+.|+|.|.|.. |.+..+.... ..+...+.+|.+... ....+..|+.+.|.|.+.+. .+.
T Consensus 55 ~~~~~L~i~~v~~~D~G~Y~C~a~n~~~g~~~~s~~~~-l~V~~~~~~p~i~~~--~~~~v~~G~~v~L~C~~~~~-~~~ 130 (198)
T 1ugn_A 55 VKKGQFPIPSITWEHTGRYRCYYGSDTAGRSESSDPLE-LVVTGAYIKPTLSAQ--PSPVVNSGGNVTLQCDSQVA-FDG 130 (198)
T ss_dssp HTTTEEEESSCCGGGCEEEEEEEEETTTEECCCCCCEE-EEEECSSCCCEEEEE--SCSEEETTCCEEEEEECSSC-CSE
T ss_pred CcccEEEECCCCHHHCeEEEEEEECCCCCcccCCccEE-EEEcccccCCccccC--CccccCCCCcEEEEEecCCC-CcE
Confidence 356789999999999999999999987 6444443322 222222334554322 23578899999999999888 789
Q ss_pred EEEEeCCeEeccCCcE-EE-EeCCCeEEEEECCCCCCCceeEEEEEEcCCC
Q psy7040 458 KEWLCNDITIISKDRF-KI-VNDDKSTKLKVFDSKRGDSGIYTLAVKNSWG 506 (716)
Q Consensus 458 ~~W~~~~~~~~~~~~~-~~-~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g 506 (716)
+.|++++..+...... .. ........|.|.++...|.|.|+|.|.|..+
T Consensus 131 v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~ 181 (198)
T 1ugn_A 131 FILCKEGEDEHPQCLNSQPHARGSSRAIFSVGPVSPSRRWWYRCYAYDSNS 181 (198)
T ss_dssp EEEEEC------CEEEC------CCEEEEEECCCCTTSCEEEEEEEECTTS
T ss_pred EEEEECCCccCCccccccccCCCcceeEEEecccCcccCeEEEEEEEeCCC
Confidence 9999999876432211 11 1122457899999999999999999999876
No 476
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.69 E-value=4.1e-08 Score=77.82 Aligned_cols=72 Identities=24% Similarity=0.401 Sum_probs=65.5
Q ss_pred ccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcC
Q psy7040 432 QLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNS 504 (716)
Q Consensus 432 ~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~ 504 (716)
.+.++.+..|+.+.|.|.+.+.|.+ +.|++++..+....++.+...+....|.|.++...|.|.|+|.|.|.
T Consensus 14 ~~~~~~v~~G~~v~l~C~~~~~~~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~ 85 (106)
T 2dlt_A 14 DIADLTVKAAEQAVFKCEVSDEKVT-GKWYKNGVEVRPSKRITISHVGRFHKLVIDDVRPEDEGDYTFVPDGY 85 (106)
T ss_dssp CCCCEEEESSCCEECCCEESCSSCE-EEEEESSCBCCCCSSCEEEEETTEEEEEESSCCTTTCSCEEEEEETS
T ss_pred CCCCeEEeCCCeEEEEEEEcCCCcc-eEEEcCCEECcCCCCEEEEEeCCEEEEEECCCCcCCCEEEEEEEccC
Confidence 3557889999999999999998887 99999999988888888888888889999999999999999999998
No 477
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=98.68 E-value=1.2e-07 Score=83.34 Aligned_cols=108 Identities=19% Similarity=0.195 Sum_probs=75.4
Q ss_pred eEEEEcCCCCCCeEEEEEEEEcCCCCCccc--eeeeccCCCCCCccceeeccceeEEEEEEeeEEEEeeeeccCcee---
Q psy7040 570 TKITIRPLQRSDTAQYTVTATNSQGKDQVF--IEVVVTDKPSAPEGPIQWLLTLTDVTWEISNYLQELHSSLMPISL--- 644 (716)
Q Consensus 570 ~~~~i~~L~~~~~y~~~v~a~n~~G~~~~s--~~~~v~~~p~~~~~~~~~~~~~v~l~w~i~~y~v~~~~~~~~~~~--- 644 (716)
.++.|.+++..+.+.|+|.|.|..|..... ..+.|..++..|. +.. ....+. |.|.+.+
T Consensus 66 gsL~I~~v~~~DsG~Y~c~~~n~~g~~~~~~~~~L~V~~~~~~P~-i~~-~~~~v~--------------L~C~~~~~p~ 129 (182)
T 1hnf_A 66 GTLKIKHLKTDDQDIYKVSIYDTKGKNVLEKIFDLKIQERVSKPK-ISW-TCINTT--------------LTCEVMNGTD 129 (182)
T ss_dssp SCEEECSCCGGGCEEEEEEEEETTSCEEEEEEEEEEEECCCCCCE-EEE-ETTTTE--------------EEEECSSCSS
T ss_pred CCEEECCCChhhCEEEEEEEEeCCCceeEEEEEEEEEcCcCCCCE-EEE-ccCcEE--------------EEeEccCCCC
Confidence 689999999999999999999988865432 2344655555555 332 222343 5666654
Q ss_pred -eEEEEeCCeEeeecccceeeEEEEccCCCCCcEEEEEEEEcCCCCceeeEEEEE
Q psy7040 645 -ESQYLMNDKRVTIDNVDYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVV 698 (716)
Q Consensus 645 -~~~W~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~y~~~a~n~~G~~~~s~~l~v 698 (716)
.+.|+++|..+ .. ....+.+ .+...|.|.|+|.|.|..|....+..+..
T Consensus 130 ~~~~W~~~g~~l-~~---~~~~i~~-~~~~~d~G~Y~C~a~N~~~~~~s~~~~~c 179 (182)
T 1hnf_A 130 PELNLYQDGKHL-KL---SQRVITH-KWTTSLSAKFKCTAGNKVSKESSVEPVSC 179 (182)
T ss_dssp CEEEEEESSCEE-EE---ESSCEEE-ECCSCEEEEEEEEEECSSCEEEEEEEEEE
T ss_pred CEEEEEECCEEC-CC---CCcEEEE-ecccCCCcEEEEEEEeCCCCcEEcceecC
Confidence 89999999988 22 1122333 23578999999999999998887776643
No 478
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=98.68 E-value=4.6e-08 Score=89.03 Aligned_cols=121 Identities=12% Similarity=0.162 Sum_probs=90.2
Q ss_pred CCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccCCCeEEE
Q psy7040 381 TPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEW 460 (716)
Q Consensus 381 ~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W 460 (716)
..++.|.++...+.+.|+|.+.+..+... + ......+...+..|.+...... +..|..+.|.|.+.+.| +.+.|
T Consensus 70 ~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~-~-~~~~l~V~~~~~~p~i~~~~~~---~~~g~~v~l~C~~~~~p-p~i~W 143 (208)
T 3r4d_A 70 NGSLLFQMITMKDMGVYTLDMTDENYRRT-Q-ATVRFHVHQPVTQPFLQVTNTT---VKELDSVTLTCLSNDIG-ANIQW 143 (208)
T ss_dssp TSCEEECSCCGGGCEEEEEEEECSSCEEE-E-EEEEEEEECCCCCCEEEESCSS---CCTTCCEEEEEECSCTT-CEEEE
T ss_pred CCeEEEccccccCCeEEEEEEEcccCcee-E-EEEEEEeccCCCCCEEecCCce---EeeCCCEEEEEECCCCC-CceEE
Confidence 34799999999999999999999754211 1 1111222233334554432222 78899999999999876 79999
Q ss_pred EeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCcee
Q psy7040 461 LCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDK 509 (716)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~ 509 (716)
++++..+....++.+...+ ..|.|.++...|.|.|+|.|.|..|...
T Consensus 144 ~~~g~~l~~~~~~~~~~~~--~~L~i~~v~~~d~G~Y~C~a~N~~g~~~ 190 (208)
T 3r4d_A 144 LFNSQSLQLTERMTLSQNN--SILRIDPIKREDAGEYQCEISNPVSVRR 190 (208)
T ss_dssp EETTEECCCCSSEEEETTT--TEEEESSCCGGGCEEEEEEEECTTCCEE
T ss_pred EECCEeCCCCCCeEEcCCC--CEEEEeccCHHhCeEEEEEEecCCCccc
Confidence 9999998877777665443 5899999999999999999999999764
No 479
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=98.68 E-value=7.1e-07 Score=83.62 Aligned_cols=42 Identities=21% Similarity=0.116 Sum_probs=31.0
Q ss_pred eeEEEEccCCCCCcEEEEEEEEcCCCCc-eeeEEEEEecCCCCC
Q psy7040 663 FTKITIRPLQRSDTAQYTVTATNSQGKD-QVFIEVVVTDKPSAP 705 (716)
Q Consensus 663 ~~~~~i~~l~~~~~y~y~~~a~n~~G~~-~~s~~l~v~~~p~~p 705 (716)
...|.|.++..+|+|.|.|.|.|..+.. .....|.|. .+.+|
T Consensus 204 ~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~g~~t~l~V~-~~~~p 246 (247)
T 2ghw_B 204 DFTLTISRLEPEDFAVYYCQQRSNWPPTFGQGTKVEVK-SGLVP 246 (247)
T ss_dssp EEEEEECSCCGGGCEEEEEEECSSSSCEECCCEEEEEC-CSCCC
T ss_pred eEEEEECcCCHHHCEEEEEEEccCCCceEcCCEEEEEC-CCCCC
Confidence 4579999999999999999999964433 234567776 34443
No 480
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=98.68 E-value=1.2e-07 Score=86.98 Aligned_cols=122 Identities=19% Similarity=0.253 Sum_probs=87.5
Q ss_pred EecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEE-eccCCCeEEEEeC
Q psy7040 385 KVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINV-IGEPIPTKEWLCN 463 (716)
Q Consensus 385 ~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v-~~~p~~~~~W~~~ 463 (716)
.|.++...+.+.|+|.+.|..|..........+.. .+|.+. ..+....+..|..+.|.|.+ .+.|.+.+.|+++
T Consensus 72 ~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~~l~v~~----~~~~~~-~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~ 146 (217)
T 2vr9_A 72 TMQGKKEQDGGEYWCVAKNRVGQAVSRHASLQIAV----LRDDFR-VEPKDTRVAKGETALLECGPPKGIPEPTLIWIKD 146 (217)
T ss_dssp CCBSSSCBCCEEEEEEEEETTEEEECCCEEEEECE----ECCSCS-BCCCCEEECTTSCEEECCBCCCEESCCEEEEEET
T ss_pred EeccCCcccCceEEEEEecCCCccccccceEEEEE----eCCCcE-ECCCccEEcCCCeEEEEEECCCCCCCCeEEEEEC
Confidence 57778889999999999998775422111111111 122222 22346778999999999999 9999999999999
Q ss_pred CeEecc--------CCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEEEE
Q psy7040 464 DITIIS--------KDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKV 514 (716)
Q Consensus 464 ~~~~~~--------~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~ 514 (716)
+..+.. ..++.+.. ...|.|.++...|.|.|+|.|.|..|....+..+
T Consensus 147 g~~~~~~~~~~~~~~~~~~~~~---~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~~ 202 (217)
T 2vr9_A 147 GVPLDDLKAMSFGASSRVRIVD---GGNLLISNVEPIDEGNYKCIAQNLVGTRESSYAK 202 (217)
T ss_dssp TEEECCCCCC---CCCSEEEET---TTEEEESSCCSTTCEEEEEEEEETTEEEECCCEE
T ss_pred CcCCCcccccccccCCcEEecC---CCcEEEeeCCHHHCeEEEEEEEcccceeccccEE
Confidence 988863 23333322 2379999999999999999999999987665433
No 481
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=98.68 E-value=4.4e-07 Score=83.03 Aligned_cols=115 Identities=15% Similarity=0.145 Sum_probs=73.3
Q ss_pred eEEEEcCCCCCCeEEEEEEEEcCCCCCc--cceeeeccCCCCCCccceee-------ccceeEEEEEEeeEEEEeeeecc
Q psy7040 570 TKITIRPLQRSDTAQYTVTATNSQGKDQ--VFIEVVVTDKPSAPEGPIQW-------LLTLTDVTWEISNYLQELHSSLM 640 (716)
Q Consensus 570 ~~~~i~~L~~~~~y~~~v~a~n~~G~~~--~s~~~~v~~~p~~~~~~~~~-------~~~~v~l~w~i~~y~v~~~~~~~ 640 (716)
..+.|.+++..+.+.|.|.|.|..|... ....+.|...+..|. +... .+..+.|.+.+.++.-
T Consensus 72 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~P~-v~~~~~~~~~~~g~~v~L~C~~~g~~P------- 143 (216)
T 2xzc_L 72 ATLGITGLQTGDEADYYCGTWDSSLNPVFGGGTKLEIKRTVAAPS-VFIFPPSDEQLKSGTASVVCLLNNFYP------- 143 (216)
T ss_dssp EEEEECSCCGGGCEEEEEEEECTTSCEEEBCCEEEEECCCCBCCE-EEEECCCHHHHHTTEEEEEEEEEEEBS-------
T ss_pred EEEEECCCCcccCEEEEEEEEeCCCcceECCCEEEEEcCCCCCCc-eEEeCCChhhccCCcEEEEEEEEeEcC-------
Confidence 6899999999999999999999876111 122333543333443 3221 2345555544333210
Q ss_pred CceeeEEEEeCCeEeeec-c--------cc----eeeEEEEccCCCCCcEEEEEEEEcCCCCceee
Q psy7040 641 PISLESQYLMNDKRVTID-N--------VD----YFTKITIRPLQRSDTAQYTVTATNSQGKDQVF 693 (716)
Q Consensus 641 ~~~~~~~W~~~~~~~~~~-~--------~~----~~~~~~i~~l~~~~~y~y~~~a~n~~G~~~~s 693 (716)
..-.+.|+++|..+... . .+ ....|.|..+..+|.|.|+|.|.|........
T Consensus 144 -~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~ 208 (216)
T 2xzc_L 144 -REAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVT 208 (216)
T ss_dssp -SCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSCEE
T ss_pred -CceEEEEEECCeecCCCeeEecCcccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCCCceE
Confidence 00068999999887543 0 01 11378999999999999999999987765433
No 482
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.67 E-value=7.6e-08 Score=75.83 Aligned_cols=71 Identities=21% Similarity=0.328 Sum_probs=64.6
Q ss_pred ccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEc
Q psy7040 432 QLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKN 503 (716)
Q Consensus 432 ~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n 503 (716)
.+..+.+..|+.+.|.|.+.+ |.+.+.|++++..+....++.+...+....|.|.++...|.|.|+|.|.|
T Consensus 14 ~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 84 (103)
T 2edf_A 14 PLEDQWVAPGEDVELRCELSR-AGTPVHWLKDRKAIRKSQKYDVVCEGTMAMLVIRGASLKDAGEYTCEVEA 84 (103)
T ss_dssp CCCCEEECTTSCEEECCEESS-SSCCCCEEESSCBCCCSSSEEEEEETTEEEEEESSCCTTTCSEEEEECSS
T ss_pred cCCccEEcCCCCEEEEEEEeC-CCCcEEEEECCEEccCCCCEEEEECCCEEEEEECCCCcccCEEEEEEEcc
Confidence 345688999999999999997 78899999999999888888888888888999999999999999999999
No 483
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=98.67 E-value=3.6e-07 Score=86.45 Aligned_cols=247 Identities=8% Similarity=0.029 Sum_probs=82.9
Q ss_pred cEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEE-EeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEEE
Q psy7040 435 DIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKI-VNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAK 513 (716)
Q Consensus 435 ~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~-~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~ 513 (716)
.+.+..|+.+.+.|...-..+..+.|.-.-... .. ........+.+.++..+ +.|+|++....-.....+.
T Consensus 8 ~~~V~~G~sv~l~Cs~~c~~p~~~~~~t~l~~~------~~~~~g~~~~~~~l~~v~~~--~~y~C~~~~~~~~~~~~v~ 79 (291)
T 1mq8_A 8 KVILPRGGSVLVTCSTSCDQPKLLGIETPLPKK------ELLLPGNNRKVYELSNVQED--SQPMCYSNCPDGQSTAKTF 79 (291)
T ss_dssp EEEECTTCEEEEEEEECCSSCSEEEEECSSCCC------CCCCSCSSEEEEEEESCCSC--CCCEEEEECSSCEEEEECE
T ss_pred ccEEcCCCeEEEEEeCCCCCCccceEEecCCCc------ccccCCCceEEEEEEecccC--CeEEEEEEcCCccEEEEEE
Confidence 467999999999999974333348886321100 00 00112235778887754 4699998643323333444
Q ss_pred EEEE----EEEEEEeC-CCCCCCCceeeEEEEEEecCCC---ceeeeEEEccceeeeecccc--ceeEEEEcCCCCCCeE
Q psy7040 514 VTVL----GCSLKWNP-PEDDGGAPIEYYMVEKMETDTG---KVLIKWIRTNDKRVTIDNVD--YFTKITIRPLQRSDTA 583 (716)
Q Consensus 514 ~~v~----~v~l~W~~-p~~~~~~~i~~y~v~~~~~~~~---~~~~~w~~~~~~~~~~~~~~--~~~~~~i~~L~~~~~y 583 (716)
+.+. .+.+.-.+ ....+ ..+.|.....+.. ...+.|++.+.......... ....+.+..-..++..
T Consensus 80 l~V~~~P~~v~I~~~~~~~~~G----~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~~~~~~~~~~~l~~~~~~~D~g~ 155 (291)
T 1mq8_A 80 LTVYWTPERVELAPLPSWQPVG----KNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAVGEPAEVTTTVLVRRDHHGA 155 (291)
T ss_dssp EEECBCCSCCCBCCCCSBCCSS----CCCEEEEEECCCBSTTTEEEEEESSSSEEEEEECCBTTEEEEEECCCSSSCSSC
T ss_pred EEEecCCCCCEEecCCccccCC----CCEEEEEEecCccCCCCcEEEEEECCEEeecccCCCCCceEEEEeeeeeccCCc
Confidence 4444 22222111 01111 2234443333221 12379999887655333111 1245666666667778
Q ss_pred EEEEEEEcCCCC-Cc-------cceeeeccCCCCC-CccceeeccceeEEEEEEeeEEEEeeeeccCcee-------eEE
Q psy7040 584 QYTVTATNSQGK-DQ-------VFIEVVVTDKPSA-PEGPIQWLLTLTDVTWEISNYLQELHSSLMPISL-------ESQ 647 (716)
Q Consensus 584 ~~~v~a~n~~G~-~~-------~s~~~~v~~~p~~-~~~~~~~~~~~v~l~w~i~~y~v~~~~~~~~~~~-------~~~ 647 (716)
.|+|+|.|..+. |. ....+.|..+|.. +. +.. ...+. .|-. ..+.|.+.| .+.
T Consensus 156 ~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~~~P~~~~~-~~~--p~~l~-----eG~~---v~l~C~~~g~~P~~~~~v~ 224 (291)
T 1mq8_A 156 NFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQ-LVS--PRVLE-----VDTQ---GTVVCSLDGLFPVSEAQVH 224 (291)
T ss_dssp EEEEEEEEECGGGTSCEEEECCCCEECBC---------------------------------------------------
T ss_pred eEEEEEEecCCccCCccccccccceEEEEEecCCCCce-ecC--CcCcc-----CCCe---EEEEEEcCCCCCCcccEEE
Confidence 999999998763 32 1122335555433 33 221 11111 1111 237777776 489
Q ss_pred EEeCCeEeeecccceeeEEEEccC---CC--CCcEEEEEEEEcCCCCceeeEEEEEecCCCC
Q psy7040 648 YLMNDKRVTIDNVDYFTKITIRPL---QR--SDTAQYTVTATNSQGKDQVFIEVVVTDKPSA 704 (716)
Q Consensus 648 W~~~~~~~~~~~~~~~~~~~i~~l---~~--~~~y~y~~~a~n~~G~~~~s~~l~v~~~p~~ 704 (716)
|.++|+.+..........+.+..+ .. +..|.|+|.|.|..........|.|...|.|
T Consensus 225 w~~~g~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~l~v~~~~~~ 286 (291)
T 1mq8_A 225 LALGDQRLNPTVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPAP 286 (291)
T ss_dssp --------------------------------------------------------------
T ss_pred EEECCEecCceeeecCCeEEEEEecceeEcCCCCEEEEEEEEeCCcceEEEEEEEEEcCCCc
Confidence 999999887552222234444444 23 4578889999986655677888998876554
No 484
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.67 E-value=1.2e-07 Score=74.84 Aligned_cols=70 Identities=11% Similarity=0.225 Sum_probs=64.5
Q ss_pred EEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCC
Q psy7040 436 IKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWG 506 (716)
Q Consensus 436 ~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g 506 (716)
+.+..|+.+.|.|.+.+.|.+ +.|++++..+....++.+...+....|.|.++...|.|.|+|.|.|..+
T Consensus 20 ~~v~~G~~v~l~C~~~~~p~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~ 89 (104)
T 2e6p_A 20 LTFTTSERVVLTCELSRVDFP-ATWYKDGQKVEESELLVVKMDGRKHRLILPEAKVQDSGEFECRTEGVSA 89 (104)
T ss_dssp EEEESSSCEECCEECSSTTCC-CEEEETTEECCCBTTBEEEEETTEEEEEESSCCTTTCEEEEEECSSCCC
T ss_pred EEEeCCCcEEEEEEecCCCCc-cEEeeCCEECCCCCCEEEEeCCCEEEEEECCCChhhCEEEEEEECCceE
Confidence 788999999999999999998 9999999999888888888888888999999999999999999999755
No 485
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.67 E-value=2.7e-07 Score=72.71 Aligned_cols=82 Identities=22% Similarity=0.340 Sum_probs=67.2
Q ss_pred cccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCC----------cEEEEeCCCeEEEEECCCCCCCceeEEEE
Q psy7040 431 DQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKD----------RFKIVNDDKSTKLKVFDSKRGDSGIYTLA 500 (716)
Q Consensus 431 ~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~----------~~~~~~~~~~~~l~i~~l~~~~~~~y~~~ 500 (716)
..+.++.+.+|+.+.|.|.+.+ .+.+.|++++..+..+. ++.+..++..+.|+|.++.++|.|.|+|.
T Consensus 13 ~~l~d~~v~eG~~a~f~C~vs~--~p~v~W~knG~~l~~~~~~~~~~~~~~r~~i~~~g~~~~L~I~~v~~~D~G~Y~~~ 90 (112)
T 2e6q_A 13 AGLEDVQVYDGEDAVFSLDLST--IIQGTWFLNGEELKSNEPEGQVEPGALRYRIEQKGLQHRLILHAVKHQDSGALVGF 90 (112)
T ss_dssp ECCCCEEEETTCEEEEEEEESS--CCCCEEEESSCBCCSSCCCTTSCTTSCEEEECCBTTEEEEEEESCCSTTCSEEEEE
T ss_pred cCCCCeEEcCCCcEEEEEEECC--CCeEEEEECCEECccCcccccccccccEEEEEeCCcEEEEEECCCCHHHCccEEEE
Confidence 4567899999999999999997 77899999999998887 88888888889999999999999999775
Q ss_pred EEcCCCceeeEEEEEEE
Q psy7040 501 VKNSWGTDKGTAKVTVL 517 (716)
Q Consensus 501 a~n~~g~~~~s~~~~v~ 517 (716)
..+. ...++.+.|.
T Consensus 91 ~~~~---~~ssA~L~V~ 104 (112)
T 2e6q_A 91 SCPG---VQDSAALTIQ 104 (112)
T ss_dssp EETT---EEEEEEEEEE
T ss_pred EECC---eeEEEEEEEe
Confidence 5442 2334444443
No 486
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=98.66 E-value=2.3e-07 Score=85.54 Aligned_cols=129 Identities=12% Similarity=0.092 Sum_probs=75.9
Q ss_pred eEEEEcCCCCCCeEEEEEEEEcCCCCC-ccceeeeccC-CCCCCccceee-------ccceeEEEEEEeeEEEEeeeecc
Q psy7040 570 TKITIRPLQRSDTAQYTVTATNSQGKD-QVFIEVVVTD-KPSAPEGPIQW-------LLTLTDVTWEISNYLQELHSSLM 640 (716)
Q Consensus 570 ~~~~i~~L~~~~~y~~~v~a~n~~G~~-~~s~~~~v~~-~p~~~~~~~~~-------~~~~v~l~w~i~~y~v~~~~~~~ 640 (716)
..+.|.+++..+.+.|.|.+.|..+.. .....+.|.. ++..|. +... .+..+.|.+.+.|+.
T Consensus 79 ~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~P~-v~~~~~~~~~~~g~~v~L~C~~~g~~-------- 149 (227)
T 1mju_H 79 AYMQLSSLTSDDSAVYYCANKLGWFPYWGQGTLVTVSAAKTTAPS-VYPLAPVCGDTSGSSVTLGCLVKGYF-------- 149 (227)
T ss_dssp EEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEECSSCCBCCE-EEEECCCC------CEEEEEEEEEEB--------
T ss_pred EEEEECCCCcccCEEEEEEECCCCceEEcCcEEEEEcCCCCCCCE-EEEecCCccccCCCcEEEEEEeecEe--------
Confidence 789999999999999999999863210 0112334443 233343 3221 133444444332220
Q ss_pred CceeeEEEEeCCeEeeec-----c--c--ceeeEEEEccCCCCCcEEEEEEEEcCCCCceeeEEEEEecCCCCCCCC
Q psy7040 641 PISLESQYLMNDKRVTID-----N--V--DYFTKITIRPLQRSDTAQYTVTATNSQGKDQVFIEVVVTDKPSAPEGP 708 (716)
Q Consensus 641 ~~~~~~~W~~~~~~~~~~-----~--~--~~~~~~~i~~l~~~~~y~y~~~a~n~~G~~~~s~~l~v~~~p~~p~~p 708 (716)
+..-.+.|++++..+... . . .....|.|.....++ |.|+|.|.|..+.......+.+..+|++|=+|
T Consensus 150 P~p~~v~W~~~g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~~~~~~~p~~~~~~ 225 (227)
T 1mju_H 150 PEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRGPTIKPCPP 225 (227)
T ss_dssp SSCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEECTTTTTT-SCCEEEEEEGGGTEEEEEECCCCCC-------
T ss_pred CCCeEEEEecCCCcCCcEECCceecCCeEEEEEEEEEchhhcCC-CeEEEEEEECCCCcceEEEeCCCCCCCCCCCC
Confidence 000078999998753211 0 0 122578999998888 99999999988887788888888888877555
No 487
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=98.66 E-value=2.8e-07 Score=84.13 Aligned_cols=116 Identities=9% Similarity=0.021 Sum_probs=85.7
Q ss_pred eEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccCCCeEEEEe
Q psy7040 383 KGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLC 462 (716)
Q Consensus 383 ~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~ 462 (716)
.+.|.++...+.+.|+|.|.|..|.+..+..... .+.....+|.+.... ...+.+|+.+.|.|...+.+.+.+.|++
T Consensus 65 ~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~~~l-~V~~~~~~P~i~~~p--~~~v~~G~~v~L~C~~~~~~~~~~~W~k 141 (218)
T 1uct_A 65 EFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLEL-VVTGLYGKPFLSADR--GLVLMPGENISLTCSSAHIPFDRFSLAK 141 (218)
T ss_dssp EEEECSCCGGGCEEEEEEEEETTTEEEECCCEEE-EEECSSCCCEEEESS--CSEECTTCCCEEEEECSSSCCSEEEEEE
T ss_pred EEEEcccccccCEEEEEEEEcCCCceeecCCEEE-EEcCcccCCEEEeCC--CCccCCCCCEEEEEeCCCCCCCEEEEEE
Confidence 8999999999999999999998764443433222 222223355543221 3467899999999977788888999999
Q ss_pred CCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCC
Q psy7040 463 NDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSW 505 (716)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~ 505 (716)
++..+... .........|.|.++...|.|.|+|.|.|..
T Consensus 142 ~g~~~~~~----~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 180 (218)
T 1uct_A 142 EGELSLPQ----HQSGEHPANFSLGPVDLNVSGIYRCYGWYNR 180 (218)
T ss_dssp TTCSSCCS----EEECSSSEEEECCSCCGGGCEEEEEEEECTT
T ss_pred CCCccccc----ccCCCccCEEEEccCCcccCEEEEEEEEcCC
Confidence 99776431 1233456789999999999999999999864
No 488
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=98.66 E-value=1.1e-07 Score=75.68 Aligned_cols=90 Identities=20% Similarity=0.372 Sum_probs=65.7
Q ss_pred CCcccccccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcC
Q psy7040 425 SPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNS 504 (716)
Q Consensus 425 ~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~ 504 (716)
+|.+. ..+....+..|..+.|.|.+.+.|.+.+.|++++..+.....+.+.. ....|.|.++...|.|.|+|.|.|.
T Consensus 10 ~P~~~-~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~--~~~~L~i~~v~~~D~G~Y~C~a~n~ 86 (108)
T 3kvq_A 10 APTIT-GNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKD--GNRNLTIRRVRKEDEGLYTCQACSV 86 (108)
T ss_dssp -CCCB-SCCCCEEEETTCCEEEECBCC----CCEEEEESSSBCCCBTTEEEET--TTTEEEECSCCGGGCEEEEEEEC--
T ss_pred CCcee-cCCCCeEEeCCCeEEEEEECcCcCCCeEEEEECCeEcccCCCeEEeC--CCcEEEEeecCcccCEEEEEEEEeC
Confidence 44443 23456789999999999999999999999999998887666665543 3457999999999999999999999
Q ss_pred CCceeeEEEEEEE
Q psy7040 505 WGTDKGTAKVTVL 517 (716)
Q Consensus 505 ~g~~~~s~~~~v~ 517 (716)
.|....+..+.+.
T Consensus 87 ~g~~~~~~~l~V~ 99 (108)
T 3kvq_A 87 LGCAKVEAFFIIE 99 (108)
T ss_dssp --CEEEEEEEEEE
T ss_pred CCceEEEEEEEEe
Confidence 9998887777665
No 489
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=98.66 E-value=5.4e-07 Score=80.55 Aligned_cols=151 Identities=15% Similarity=0.200 Sum_probs=97.2
Q ss_pred ccEEEecCCeEEEEEEEec-cCCCeEEEEeCCeEec---cC---------------CcEEEEeCCCeEEEEECCCCCCCc
Q psy7040 434 SDIKVRAGSNFEFDINVIG-EPIPTKEWLCNDITII---SK---------------DRFKIVNDDKSTKLKVFDSKRGDS 494 (716)
Q Consensus 434 ~~~~~~~g~~~~~~~~v~~-~p~~~~~W~~~~~~~~---~~---------------~~~~~~~~~~~~~l~i~~l~~~~~ 494 (716)
..+.+..|+.+.|.|.+.+ .+.+.+.|++++..+. .. .++.+. ...+|.|.++...|.
T Consensus 6 ~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~---~~~sL~I~~v~~~D~ 82 (193)
T 2if7_A 6 LMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFT---QSYSLQLSNLKMEDT 82 (193)
T ss_dssp EEEEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEEC---TTCCEEECSCCGGGC
T ss_pred eEEEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEEC---CCeEEEECCCCcccC
Confidence 4578899999999999875 5567999999875432 10 122222 246799999999999
Q ss_pred eeEEEEEEcCCCceeeEEEEEEE----EEEEEEeCCCCCCCC--ceeeEEEEEEecCCCceeeeEEEccceeeeeccccc
Q psy7040 495 GIYTLAVKNSWGTDKGTAKVTVL----GCSLKWNPPEDDGGA--PIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDNVDY 568 (716)
Q Consensus 495 ~~y~~~a~n~~g~~~~s~~~~v~----~v~l~W~~p~~~~~~--~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 568 (716)
|.|+|.+.|..|.......+.|. ...+.-......+|. ....|.+.. ..+.+.+.|++.+.....
T Consensus 83 G~Y~C~~~~~~~~~~~~~~L~V~~~~~~p~i~~~~~~~~~g~~~v~L~C~~~g---~~p~p~i~W~~~g~~l~~------ 153 (193)
T 2if7_A 83 GSYRAQISTKTSAKLSSYTLRILRQLRNIQVTNHSQLFQNMTCELHLTCSVED---ADDNVSFRWEALGNTLSS------ 153 (193)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEECCCEEEEEEECCC---CSSEEEEEEEEEES---CCTTCEEEEEETTEEEES------
T ss_pred ceEEEEEEecCCCeEEEEEEEEEccCCCCeEecCceeecCCCceEEEEEEEec---CCCceEEEEEeCCEEcCC------
Confidence 99999999998876666666665 233333221111221 233333322 123566999998754321
Q ss_pred eeEEEEcCCCCC-CeEEEEEEEEcCCCCC
Q psy7040 569 FTKITIRPLQRS-DTAQYTVTATNSQGKD 596 (716)
Q Consensus 569 ~~~~~i~~L~~~-~~y~~~v~a~n~~G~~ 596 (716)
...+.|...... +.+.|+|.|.|..|..
T Consensus 154 ~~~l~i~~~~~~~d~G~Y~C~a~N~~g~~ 182 (193)
T 2if7_A 154 QPNLTVSWDPRISSEQDYTCIAENAVSNL 182 (193)
T ss_dssp SSEEEEEECTTTCSCCEEEEEEEETTEEE
T ss_pred CCeEEEEeccCcCCCCcEEEEEECCCCcc
Confidence 144566433333 6899999999998864
No 490
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=98.66 E-value=5.3e-07 Score=82.57 Aligned_cols=129 Identities=15% Similarity=0.116 Sum_probs=91.5
Q ss_pred CCCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeec----------CCCCCcccccccccEEEecCCeEEEEE
Q psy7040 379 GDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARA----------KKVSPYINRDQLSDIKVRAGSNFEFDI 448 (716)
Q Consensus 379 ~~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~----------~~~~P~~~~~~~~~~~~~~g~~~~~~~ 448 (716)
.....+.|.++...+.+.|+|.+.|..|..........+.... ...+|.+. ..+....+..|..+.|.|
T Consensus 62 ~~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~v~~G~~v~L~C 140 (218)
T 3k0w_A 62 GNTSELIFNAVHVKDAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQIC-VEPTSQKLMPGSTLVLQC 140 (218)
T ss_dssp CCSSEEEETTCCGGGCEEEEEEEECTTCCEECCCEEEEEECCCGGGCTTCCSBCCSSCEEE-ECCCCEEECTTCCEEEEC
T ss_pred CCCCEEEEccCChhhCeEeEEEEEcCCCCceeeEEEEEEEccCcccccccccccCCCceEE-ECCCceeecCCCcEEEEE
Confidence 3456899999999999999999999876421111111111110 00113322 234457788999999999
Q ss_pred EEeccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCc-eeeEEEEEEE
Q psy7040 449 NVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGT-DKGTAKVTVL 517 (716)
Q Consensus 449 ~v~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~-~~~s~~~~v~ 517 (716)
.+.+.|.+.+.|++++..+.... ...|.|.++...|.|.|+|.|.|..|. .+..+.+.+.
T Consensus 141 ~~~g~p~~~v~W~~~~~~~~~~~---------~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~ 201 (218)
T 3k0w_A 141 VAVGSPIPHYQWFKNELPLTHET---------KKLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIID 201 (218)
T ss_dssp EEEBSSCCEEEEEETTEECTTCC---------SSEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEEC
T ss_pred EecccCCCeEEEEECCEECCCCC---------CCEEEEeecChhcCEEEEEEEEcCCCCceeeeEEEEEe
Confidence 99999999999999998875432 347999999999999999999998886 3444444444
No 491
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.66 E-value=1.3e-07 Score=76.60 Aligned_cols=89 Identities=24% Similarity=0.385 Sum_probs=71.8
Q ss_pred CCcccccccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEecc-CCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEc
Q psy7040 425 SPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIIS-KDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKN 503 (716)
Q Consensus 425 ~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~-~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n 503 (716)
+|.+. ..+..+.+..|..+.|.|.+.+.|.+.+.|++++..+.. ..++.+...+ .|.|.++...|.|.|+|.|.|
T Consensus 8 pP~i~-~~p~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~~~~~~~~~~~~---~L~i~~v~~~D~G~Y~C~a~n 83 (118)
T 2eo9_A 8 PPVIR-QGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENG---VLQIRYAKLGDTGRYTCIAST 83 (118)
T ss_dssp SCCCS-BCCCCEEEETTCEEEEECBCCCSSCCEEEEEESSSBCCTTSTTEEEEETT---EEEEESCCGGGCCCEEEEEEC
T ss_pred CCEEE-cCCCCEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCeEEEccCC---EEEEccCCcCCCEEEEEEEEc
Confidence 44443 345668899999999999999999999999999988753 4555554433 799999999999999999999
Q ss_pred CCCceeeEEEEEEE
Q psy7040 504 SWGTDKGTAKVTVL 517 (716)
Q Consensus 504 ~~g~~~~s~~~~v~ 517 (716)
..|....+..+.+.
T Consensus 84 ~~g~~~~~~~l~V~ 97 (118)
T 2eo9_A 84 PSGEATWSAYIEVQ 97 (118)
T ss_dssp SSCEEEEECCEEEE
T ss_pred CCCcEEEEEEEEEE
Confidence 99987766666555
No 492
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.65 E-value=6.3e-08 Score=77.76 Aligned_cols=85 Identities=16% Similarity=0.257 Sum_probs=66.2
Q ss_pred cccEEEecCCeEEEEEEEecc---CCCeEEEEeCCeE-ec--cCCcEEEEe--CC----CeEEEEECCCCCCCceeEEEE
Q psy7040 433 LSDIKVRAGSNFEFDINVIGE---PIPTKEWLCNDIT-II--SKDRFKIVN--DD----KSTKLKVFDSKRGDSGIYTLA 500 (716)
Q Consensus 433 ~~~~~~~~g~~~~~~~~v~~~---p~~~~~W~~~~~~-~~--~~~~~~~~~--~~----~~~~l~i~~l~~~~~~~y~~~ 500 (716)
+.++.+.+|..+.|.|.+.+. |.|.+.|+|+... +. ...++.+.. .. ....|.|.++.+.|.|.|+|.
T Consensus 14 P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DaG~Y~Ce 93 (126)
T 2dav_A 14 PQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFAGNYRCE 93 (126)
T ss_dssp CCCCEEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTSCEEEEEE
T ss_pred CCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCcccCEEEEEE
Confidence 456789999999999999876 8899999997421 11 133444432 11 247899999999999999999
Q ss_pred EEcCCCceeeEEEEEEE
Q psy7040 501 VKNSWGTDKGTAKVTVL 517 (716)
Q Consensus 501 a~n~~g~~~~s~~~~v~ 517 (716)
|.|..|..+..+.+.|.
T Consensus 94 vsn~~g~~~~~~~L~V~ 110 (126)
T 2dav_A 94 VTYKDKFDSCSFDLEVH 110 (126)
T ss_dssp EECSSCEEEECCEEEEE
T ss_pred EEeCCCcEEEEEEEEEE
Confidence 99999998888877776
No 493
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.65 E-value=4.9e-08 Score=78.10 Aligned_cols=92 Identities=22% Similarity=0.356 Sum_probs=73.3
Q ss_pred CCcccccccccEEEecCCeEEEEEEEeccCCCeEEEEeCCeEeccCCcEEEE-eCCCeEEEEECCCCCCCceeEEEEEEc
Q psy7040 425 SPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIV-NDDKSTKLKVFDSKRGDSGIYTLAVKN 503 (716)
Q Consensus 425 ~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~~~~~~~~-~~~~~~~l~i~~l~~~~~~~y~~~a~n 503 (716)
+|.+.. .+..+.+..|..+.|.|.+.+.|.+.+.|++++..+.......+. .......|.|.++...|.|.|+|.|.|
T Consensus 9 ~P~i~~-~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 87 (110)
T 2dm3_A 9 RPHFLQ-APGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIATN 87 (110)
T ss_dssp CCEEEE-CCCEEEEESSSCBCCEEEEECSSCCEEECBBSSSBCCCCSSEEEEECTTSCEEEEESSCCGGGCSBBCEEEEC
T ss_pred CCcEEe-CCCcEEEeCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCceEEEEecCCeEEEEEeeCCcccCEEEEEEEEC
Confidence 444432 245678999999999999999999999999999888765554443 334457899999999999999999999
Q ss_pred CCCceeeEEEEEEE
Q psy7040 504 SWGTDKGTAKVTVL 517 (716)
Q Consensus 504 ~~g~~~~s~~~~v~ 517 (716)
..|....++.+.|.
T Consensus 88 ~~g~~~~~~~l~V~ 101 (110)
T 2dm3_A 88 RAGQNSFSLELVVA 101 (110)
T ss_dssp SSCEEEECCEEEEE
T ss_pred CCCEEEEEEEEEEe
Confidence 99987766666554
No 494
>2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens}
Probab=98.64 E-value=1.4e-07 Score=73.34 Aligned_cols=77 Identities=12% Similarity=0.128 Sum_probs=60.9
Q ss_pred CCCCCCCCcEEEeeeCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEEE
Q psy7040 323 NQPGKPGTPEIKDFDTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAV 402 (716)
Q Consensus 323 ~~p~~p~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a~ 402 (716)
..|.+|.++++...+.+++.|+|.+|...++ .+..|+|.|..... . .......+.++|.+|.|++.|.|+|+|.
T Consensus 6 ~~Ps~v~~l~v~~~t~~Sv~LsW~~p~~~~~-~i~~Y~v~~~~~~~--~---~~~~~~~t~~~i~gL~PgT~Y~~~V~A~ 79 (104)
T 2dle_A 6 SGAIQVFDVTAVNISATSLTLIWKVSDNESS-SNYTYKIHVAGETD--S---SNLNVSEPRAVIPGLRSSTFYNITVCPV 79 (104)
T ss_dssp SSCCBEEEEEEEEECSSCEEEEEEESCSTTC-CSCEEEEEEECSSC--E---EEEEESSSEEECCSCCSSCEEEEEEEEE
T ss_pred CCCCCCceEEEEEeecCEEEEEEcCCCCCCC-ceEEEEEEEECCCC--e---EEEcCCCCEEEECCCCCCCEEEEEEEEE
Confidence 5688899999999999999999997654433 46789999986432 1 1234567899999999999999999999
Q ss_pred eCC
Q psy7040 403 NKG 405 (716)
Q Consensus 403 n~~ 405 (716)
...
T Consensus 80 ~~~ 82 (104)
T 2dle_A 80 LGD 82 (104)
T ss_dssp SSS
T ss_pred ECC
Confidence 543
No 495
>2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C*
Probab=98.62 E-value=1.4e-06 Score=78.03 Aligned_cols=90 Identities=16% Similarity=0.186 Sum_probs=68.4
Q ss_pred CCCCCCCCeEEeEEeCCeEEEEEECCCCCCCCccceEEEEEEeCCCCCeEEccccCcccceEEEcCCCCCCeEEEEEEEE
Q psy7040 222 KPSPPGGPLKVSNVHAEGVTLDWKVPDDDGGQPIEKYVVDKMDEATGRWTPAGETEGPVTGLEVEGLIPNHKYKFRVRAV 301 (716)
Q Consensus 222 ~p~~p~~~~~~~~~~~~~~~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~ 301 (716)
+|.||.+ |.+.......+.|+|..|.. . ....|.|+++......|..... .....+.|.+|.|++.|.++|+|.
T Consensus 98 kP~pP~~-l~~~~~~~~~l~l~W~~p~~-~--~~l~yev~y~~~~~~~w~~~~~--~~~~~~~l~~l~p~~~Y~vqVR~~ 171 (199)
T 2b5i_C 98 IPWAPEN-LTLHKLSESQLELNWNNRFL-N--HCLEHLVQYRTDWDHSWTEQSV--DYRHKFSLPSVDGQKRYTFRVRSR 171 (199)
T ss_dssp ECCCCEE-EEEEEEETTEEEEEEECSSC-S--TTCEEEEEEEETTCSSCEEEEE--CSSCEEEECSCCTTSCEEEEEEEE
T ss_pred ecCCCcE-EEEEECCCCCEEEEECCCCC-C--CceEEEEEEeecCCcccEEEec--cCceEEEecCCCCCcEEEEEEEEe
Confidence 6888887 88888777899999998752 1 2458999999877778876543 335789999999999999999999
Q ss_pred cCCC---CCCCCcccceEE
Q psy7040 302 NKQG---KSEPLTTTASIE 317 (716)
Q Consensus 302 n~~g---~~~~~~~~~~~~ 317 (716)
...| .+.+|..+..+.
T Consensus 172 ~~~~~~~~g~WSeWS~~~~ 190 (199)
T 2b5i_C 172 FNPLCGSAQHWSEWSHPIH 190 (199)
T ss_dssp CCSSSCCCCCCCCCCCCEE
T ss_pred ccCCcCcCCeECCCCCCEE
Confidence 8542 444555554343
No 496
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=98.62 E-value=1.4e-07 Score=87.49 Aligned_cols=136 Identities=17% Similarity=0.258 Sum_probs=97.6
Q ss_pred CCCeEEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEEeccCCCeEE
Q psy7040 380 DTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKE 459 (716)
Q Consensus 380 ~~~~~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v~~~p~~~~~ 459 (716)
....+.|.++...+.+.|+|.+.|..|....+ ...........+|.+.........+..|..+.|.|.+.+.|.+.+.
T Consensus 74 ~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~--~~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~ 151 (231)
T 3ojm_B 74 QHWSLIMESVVPSDKGNYTCVVENEYGSINHT--YHLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQ 151 (231)
T ss_dssp GGTEEEECSCCGGGCEEEEEEEEETTEEEEEE--EEEEEECCCCCCCEECTTCSCCEEEETTCCEEEECCEECSSCCEEE
T ss_pred CcceEEEecCCcccCEEEEEEEecccCccccc--EEEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEEecCCCCEEE
Confidence 34578999999999999999999987653211 1111122222344444444567889999999999999999999999
Q ss_pred EEe----CCeEeccCCcE--EEEe-----CCCeEEEEECCCCCCCceeEEEEEEcCCCceeeEEEEEEE
Q psy7040 460 WLC----NDITIISKDRF--KIVN-----DDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVL 517 (716)
Q Consensus 460 W~~----~~~~~~~~~~~--~~~~-----~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s~~~~v~ 517 (716)
|++ ++..+...... .... ......|.|.++...|.|.|+|.|.|..|....+..+.+.
T Consensus 152 W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 220 (231)
T 3ojm_B 152 WIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIGQANQSAWLTVL 220 (231)
T ss_dssp EEEECCBTTBSBCTTSCBCEEEEEECSTTCSCTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEECCCCCCccccCCCcceEeEecccccccCCccEEEEecCCHHHCeEEEEEEEeccceEeeEEEEEEe
Confidence 999 66665433221 1111 1233579999999999999999999999988777776665
No 497
>3mpc_A FN3-like protein; fibronectin, FN(III), unknown function; 1.60A {Clostridium thermocellum}
Probab=98.61 E-value=1.9e-07 Score=72.41 Aligned_cols=86 Identities=16% Similarity=0.179 Sum_probs=66.7
Q ss_pred CCCCCCCCcEEEee-eCCeEEEEecCCCCCCCccceEEEEEEeecCCCceEEEeeecCCCCeEEecCCCCCCeEEEEEEE
Q psy7040 323 NQPGKPGTPEIKDF-DTDFVELAWTPPEQNGGSPIVGYIIEKKEKYSPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLA 401 (716)
Q Consensus 323 ~~p~~p~~~~~~~~-~~~~i~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~a 401 (716)
.+|.+|.++.+... ..+.+.|+|.++. ...+|.|+........|..... .....+|+..+|.+|+.|.|+|+|
T Consensus 3 ~~P~aP~~l~a~~~~~~~~v~LsW~~~~-----~~~~Y~VyR~~~~~~~~~~i~~-~~~~tsy~d~~l~~g~~Y~Y~V~A 76 (103)
T 3mpc_A 3 SAPAFPTGLSAVLDSSGNTANLTWNAAP-----GANSYNVKRSTKSGGPYTTIAT-NITSTNYTDTGVATGTKYYYVVSA 76 (103)
T ss_dssp CCCCCCEEEEEEECTTSCCEEEEEECCT-----TCSEEEEEEESSTTCCCEEEEE-EECSSEEEETTCCTTCCCEEEEEE
T ss_pred cCCCCCceeEEEEeCCCCEEEEEEECCC-----CCCEEEEEEecCCCCCcEEEee-cCCCCEEEECCCCCCCEEEEEEEE
Confidence 46888999998875 4679999999842 2588999887655556665443 245689999999999999999999
Q ss_pred EeCCCCCCCCCCC
Q psy7040 402 VNKGGPGEPSDPT 414 (716)
Q Consensus 402 ~n~~g~~~~s~~~ 414 (716)
+|..|.|.+|...
T Consensus 77 vn~~geS~~S~~v 89 (103)
T 3mpc_A 77 VSNGVETLNSAEA 89 (103)
T ss_dssp EETTEECCCCCCE
T ss_pred EeCcCCcCCCccE
Confidence 9987787776543
No 498
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=98.61 E-value=2.2e-07 Score=72.29 Aligned_cols=87 Identities=20% Similarity=0.269 Sum_probs=66.8
Q ss_pred CCcccccccccEEEecCCeEEEEEEEe-ccCCCeEEEEeCCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEc
Q psy7040 425 SPYINRDQLSDIKVRAGSNFEFDINVI-GEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKN 503 (716)
Q Consensus 425 ~P~~~~~~~~~~~~~~g~~~~~~~~v~-~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n 503 (716)
+|.+....+..+.+..|+.+.|.|.+. +.|.+.+.|++++........ ... ...|.|.++...|.|.|+|.|.|
T Consensus 9 ~~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~~~~~~~~~~--~~~---~~~L~i~~v~~~D~G~Y~C~a~n 83 (98)
T 1gl4_B 9 PIMVTVEEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPSRA--MDF---NGILTIRNVQPSDAGTYVCTGSN 83 (98)
T ss_dssp CEEEEECSCCEEEECTTCCEEEEEEEEESSSCCEEEEEEGGGBCCCTTE--EEE---TTEEEECSCCGGGCEEEEEEEEC
T ss_pred CcEEEEeCCCCeEEecCCCEEEEEeCCCCCCCcEEEEEeCCCCCCCcee--ecC---CCEEEEeCCChhhCEEEEEEecC
Confidence 344444445677899999999999998 689999999997544332221 122 23799999999999999999999
Q ss_pred CCCceeeEEEEEE
Q psy7040 504 SWGTDKGTAKVTV 516 (716)
Q Consensus 504 ~~g~~~~s~~~~v 516 (716)
..|....+..+.+
T Consensus 84 ~~g~~~~~~~l~V 96 (98)
T 1gl4_B 84 MFAMDQGTATLHV 96 (98)
T ss_dssp SSCEEEEEEEEEE
T ss_pred CCCccccEEEEEE
Confidence 9998887777665
No 499
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=98.61 E-value=1.6e-07 Score=85.67 Aligned_cols=126 Identities=21% Similarity=0.226 Sum_probs=87.7
Q ss_pred EEecCCCCCCeEEEEEEEEeCCCCCCCCCCCCceEeecCCCCCcccccccccEEEecCCeEEEEEEE-eccCCCeEEEEe
Q psy7040 384 GKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINV-IGEPIPTKEWLC 462 (716)
Q Consensus 384 ~~i~~l~~~~~Y~~~v~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~~~~~~~v-~~~p~~~~~W~~ 462 (716)
+.+.++...+.+.|+|.|.|..|....... ...+.. .+|.+ ...+....+..|..+.|.|.+ .+.|.+.+.|++
T Consensus 74 l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~--~l~V~~--~~~~~-~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~ 148 (212)
T 2v9r_A 74 IVHGRKSRPDEGVYVCVARNYLGEAVSHDA--SLEVAI--LRDDF-RQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKK 148 (212)
T ss_dssp CCCCSSCCCSCEEEEEEEEETTEEEECCCE--EEEECE--ECSSC-SBCCCCEEEETTSCEEEECBCCCEESCCEEEEEE
T ss_pred EEecCCCcccCeEEEEEEECCCCceeecce--EEEEEe--ccccc-eeCCCceEecCCCcEEEEEecCCCCCCCEEEEEE
Confidence 334556788899999999998764321111 111111 02221 223446788999999999999 999999999999
Q ss_pred CCeEeccCCcEEEEeCCCeEEEEECCCCCCCceeEEEEEEcCCCceeeE-EEEEEE
Q psy7040 463 NDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGT-AKVTVL 517 (716)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~~g~~~~s-~~~~v~ 517 (716)
++..+........... ..|.|.++...|.|.|+|.|.|..|..... +.+.+.
T Consensus 149 ~~~~l~~~~~~~~~~~---~~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~V~ 201 (212)
T 2v9r_A 149 DGSPLDDKDERITIRG---GKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVL 201 (212)
T ss_dssp TTEEECTTSTTEEEET---TEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred CCccCCCCcceEEccC---CeEEEeeCCHhhCeeEEEEEecccCceecceEEEEEE
Confidence 9998875443222222 379999999999999999999999875432 555544
No 500
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=98.60 E-value=2.5e-07 Score=80.61 Aligned_cols=147 Identities=14% Similarity=0.181 Sum_probs=95.2
Q ss_pred cEEEecCCeEEEEEEEeccCCCeEEEEeCCeEecc--CCcE--------EEEeCCCeEEEEECCCCCCCceeEEEEEEcC
Q psy7040 435 DIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIIS--KDRF--------KIVNDDKSTKLKVFDSKRGDSGIYTLAVKNS 504 (716)
Q Consensus 435 ~~~~~~g~~~~~~~~v~~~p~~~~~W~~~~~~~~~--~~~~--------~~~~~~~~~~l~i~~l~~~~~~~y~~~a~n~ 504 (716)
.+.+..|+.+.|.|.+. .|.+.+.|++++..+.. .... ++..+....+|.|.++...|.|.|.|.|.|.
T Consensus 4 ~v~~~~G~~VtL~c~~~-~~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~DsG~Y~C~~~n~ 82 (171)
T 1ccz_A 4 QIYGVVYGNVTFHVPSN-VPLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDEYEMESPNI 82 (171)
T ss_dssp EEEEETTCCEEECCCCS-SCCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTCCEEECSCCGGGCEEEEEECTTC
T ss_pred EEEEEcCCCEEEcCCCC-CCcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCCeEEECCCChhhCceEEEEEeCC
Confidence 46788999999999985 48889999998864321 0000 1222223458999999999999999999998
Q ss_pred CCceeeEEEEEEE----EEEEEEeCCCCCCCCceeeEEEEEEecCCCceeeeEEEccceeeeeccccceeEEEEcCCCCC
Q psy7040 505 WGTDKGTAKVTVL----GCSLKWNPPEDDGGAPIEYYMVEKMETDTGKVLIKWIRTNDKRVTIDNVDYFTKITIRPLQRS 580 (716)
Q Consensus 505 ~g~~~~s~~~~v~----~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~i~~L~~~ 580 (716)
.| .....+.|. ...+.+.... . .+.......+.+.+.|++.+....... ...+.+. ..+
T Consensus 83 ~~--~~~~~L~V~~~~~~p~i~~~~~~----~-----~L~C~~~~~p~p~i~W~~~~~~l~~~~----~~~l~~~--~~~ 145 (171)
T 1ccz_A 83 TD--TMKFFLYVLEMVSKPMIYWECSN----A-----TLTCEVLEGTDVELKLYQGKEHLRSLR----QKTMSYQ--WTN 145 (171)
T ss_dssp CS--CEEEEEEEECCCCCCEEEEETTT----T-----EEEEECSSCSSCEEEEEETTEEEEEES----SSEEEEE--CSC
T ss_pred CC--cEEEEEEEECcCCCCEEEEecCC----c-----EEEEEeCCCCCcEEEEEECCEECcCCc----ceEEEEe--ccC
Confidence 88 455555554 2233333221 1 233333333556799998876554221 1233333 367
Q ss_pred CeEEEEEEEEcCCCCCccc
Q psy7040 581 DTAQYTVTATNSQGKDQVF 599 (716)
Q Consensus 581 ~~y~~~v~a~n~~G~~~~s 599 (716)
+.+.|+|.|.|..|.....
T Consensus 146 ~~g~Y~C~a~N~~~~~~~~ 164 (171)
T 1ccz_A 146 LRAPFKCKAVNRVSQESEM 164 (171)
T ss_dssp CSSCEEEEEEETTEEEEEE
T ss_pred CCceEEEEEEcccCcccce
Confidence 7889999999998864443
Done!