Query psy7042
Match_columns 2245
No_of_seqs 598 out of 6346
Neff 10.8
Searched_HMMs 29240
Date Fri Aug 16 16:38:27 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7042.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7042hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dmk_A DOWN syndrome cell adhe 100.0 2.8E-54 9.5E-59 604.6 65.0 348 89-657 37-414 (816)
2 3b43_A Titin; I-SET IG fold, e 100.0 5.1E-54 1.7E-58 570.3 57.2 531 11-667 24-569 (570)
3 3b43_A Titin; I-SET IG fold, e 100.0 9.1E-52 3.1E-56 548.7 58.2 542 89-755 4-564 (570)
4 3dmk_A DOWN syndrome cell adhe 100.0 2E-49 6.8E-54 555.4 68.7 733 1144-2182 47-812 (816)
5 1e07_A Carcinoembryonic antige 100.0 9.6E-47 3.3E-51 512.3 63.9 563 43-667 69-639 (642)
6 1e07_A Carcinoembryonic antige 100.0 3.2E-44 1.1E-48 487.5 60.6 564 1378-2179 72-640 (642)
7 2ocw_A Polymeric-immunoglobuli 100.0 2.1E-39 7.3E-44 435.5 48.6 474 95-670 5-548 (585)
8 3v2a_R Vascular endothelial gr 100.0 1.4E-42 4.6E-47 485.4 17.2 597 44-675 85-763 (772)
9 2ec8_A MAST/stem cell growth f 100.0 6.3E-41 2.2E-45 442.5 27.9 422 30-675 62-517 (524)
10 3v2a_R Vascular endothelial gr 100.0 9.9E-42 3.4E-46 476.6 15.6 646 1429-2184 38-761 (772)
11 3qs9_E FL cytokine receptor; i 100.0 4.9E-39 1.7E-43 414.8 35.7 440 99-668 57-510 (527)
12 2v5y_A Receptor-type tyrosine- 100.0 2.6E-38 8.9E-43 432.8 42.3 445 495-1120 91-555 (731)
13 3qs7_E FL cytokine receptor; i 100.0 1.3E-38 4.3E-43 400.1 28.8 399 54-675 4-421 (423)
14 2ocw_A Polymeric-immunoglobuli 100.0 2.4E-36 8.3E-41 405.7 48.9 473 1428-2183 6-550 (585)
15 3kld_A Contactin 4, axcam, BIG 100.0 1.4E-37 4.7E-42 390.7 30.5 371 88-667 3-382 (384)
16 3qs9_E FL cytokine receptor; i 100.0 2.9E-36 9.8E-41 389.0 42.9 348 1431-1881 57-413 (527)
17 2jll_A NCAM2, neural cell adhe 100.0 5.1E-36 1.7E-40 379.9 43.4 366 481-987 2-378 (389)
18 3laf_A Deleted in colorectal c 100.0 5.7E-37 1.9E-41 391.2 34.6 374 88-670 19-403 (403)
19 1z7z_I Intercellular adhesion 100.0 3E-37 1E-41 399.1 30.3 426 93-669 2-450 (450)
20 2rcj_C Light chain; immunoglob 100.0 4.3E-36 1.5E-40 396.2 40.3 458 95-657 5-513 (523)
21 2ec8_A MAST/stem cell growth f 100.0 4.6E-37 1.6E-41 405.6 29.1 451 88-760 34-509 (524)
22 2v5y_A Receptor-type tyrosine- 100.0 4.1E-35 1.4E-39 401.2 43.8 566 104-1128 90-702 (731)
23 2jll_A NCAM2, neural cell adhe 100.0 4.2E-34 1.4E-38 362.3 48.1 370 1697-2072 1-379 (389)
24 1cs6_A Axonin-1; neural cell a 100.0 4.6E-36 1.6E-40 379.0 27.6 364 89-667 3-381 (382)
25 1bih_A Hemolin; insect immunit 100.0 9.9E-36 3.4E-40 378.5 25.3 374 88-666 4-394 (395)
26 2rcj_C Light chain; immunoglob 100.0 5.7E-34 2E-38 375.9 43.1 371 1430-1873 8-411 (523)
27 3p3y_A Neurofascin; IG domains 100.0 1.9E-35 6.5E-40 377.4 27.8 371 88-668 14-403 (404)
28 1z7z_I Intercellular adhesion 100.0 8.9E-35 3.1E-39 375.9 33.2 329 1430-1870 7-351 (450)
29 2v5m_A Dscam; neurobiology SPL 100.0 4.9E-35 1.7E-39 370.8 29.5 357 90-666 3-387 (388)
30 3l5h_A Interleukin-6 receptor 100.0 1.5E-35 5.2E-40 397.5 19.9 536 586-1317 13-580 (589)
31 1zlg_A Anosmin 1; insulin-like 100.0 1.1E-32 3.6E-37 369.2 46.5 491 641-1372 132-670 (680)
32 3laf_A Deleted in colorectal c 100.0 4.5E-33 1.5E-37 355.1 38.6 272 1698-2181 122-403 (403)
33 2rik_A Titin; I-SET IG fold, p 100.0 4.6E-32 1.6E-36 326.1 37.7 279 89-571 4-283 (284)
34 3kld_A Contactin 4, axcam, BIG 100.0 1.4E-32 4.9E-37 345.0 30.2 355 1435-1881 21-382 (384)
35 2rik_A Titin; I-SET IG fold, p 100.0 5.6E-31 1.9E-35 316.6 40.2 279 1696-2178 4-283 (284)
36 3qs7_E FL cytokine receptor; i 100.0 1.3E-31 4.3E-36 336.5 34.6 399 1386-1888 4-420 (423)
37 3p3y_A Neurofascin; IG domains 100.0 1.8E-31 6E-36 340.7 30.5 381 1416-1882 11-403 (404)
38 1wio_A CD4, T-cell surface gly 100.0 1.5E-32 5.1E-37 342.8 19.1 315 99-666 3-361 (363)
39 1bih_A Hemolin; insect immunit 100.0 4.1E-31 1.4E-35 335.8 29.5 374 1422-1880 7-394 (395)
40 1cs6_A Axonin-1; neural cell a 100.0 5.8E-31 2E-35 332.2 30.3 355 1435-1881 20-381 (382)
41 1qgc_4 Protein (immunoglobulin 100.0 1.9E-31 6.5E-36 343.9 26.0 366 92-665 3-436 (438)
42 2v5m_A Dscam; neurobiology SPL 100.0 1.9E-30 6.4E-35 328.6 33.0 366 1423-1880 5-387 (388)
43 2nzi_A Titin; IG-domain, FNIII 100.0 1.2E-29 4.1E-34 308.7 31.8 289 479-767 3-296 (305)
44 2nzi_A Titin; IG-domain, FNIII 100.0 4.2E-29 1.4E-33 304.0 36.0 281 88-370 2-290 (305)
45 2yd9_A Receptor-type tyrosine- 100.0 5.2E-30 1.8E-34 311.1 26.9 280 88-576 4-295 (304)
46 3l5h_A Interleukin-6 receptor 100.0 1.2E-29 4.1E-34 340.2 28.0 534 486-1229 9-587 (589)
47 2yd9_A Receptor-type tyrosine- 100.0 8.4E-29 2.9E-33 300.4 29.9 281 1695-2184 4-296 (304)
48 1wio_A CD4, T-cell surface gly 100.0 8.1E-30 2.8E-34 318.0 21.2 160 1708-1880 107-291 (363)
49 2wim_A N-CAM 2, NCAM2, neural 100.0 1E-28 3.5E-33 298.2 29.0 279 89-575 3-287 (291)
50 2y25_A Myomesin; structural pr 100.0 1.7E-29 5.8E-34 309.8 19.4 297 89-572 6-315 (317)
51 1qz1_A Neural cell adhesion mo 100.0 3.7E-28 1.3E-32 293.4 30.2 276 90-572 2-290 (291)
52 1qgc_4 Protein (immunoglobulin 100.0 1.9E-28 6.4E-33 315.9 27.7 216 44-263 74-321 (438)
53 2wim_A N-CAM 2, NCAM2, neural 100.0 4.2E-28 1.4E-32 292.9 28.6 280 1696-2183 3-288 (291)
54 2y25_A Myomesin; structural pr 100.0 1.4E-28 4.7E-33 301.7 23.4 298 1696-2180 6-316 (317)
55 1qz1_A Neural cell adhesion mo 100.0 2.1E-27 7.1E-32 286.8 32.7 276 1697-2179 2-290 (291)
56 1igt_B IGG2A intact antibody - 100.0 5.8E-28 2E-32 310.6 27.5 370 96-657 6-434 (444)
57 1hzh_H IGG, immunoglobulin hea 100.0 9.6E-28 3.3E-32 309.5 27.5 371 97-658 7-444 (457)
58 1fnf_A Fibronectin; RGD, extra 100.0 3.5E-26 1.2E-30 286.2 35.6 354 669-1320 1-361 (368)
59 1zlg_A Anosmin 1; insulin-like 100.0 2.1E-25 7.3E-30 298.5 45.0 470 898-1594 156-674 (680)
60 1iga_A IGA1; immunoglobulin; N 99.9 4E-26 1.4E-30 295.4 35.2 375 94-658 5-444 (475)
61 3t1w_A Four-domain fibronectin 99.9 1.3E-25 4.4E-30 281.7 37.4 353 669-1318 2-361 (375)
62 2o26_X MAST/stem cell growth f 99.9 6.8E-27 2.3E-31 281.5 24.1 269 88-574 10-290 (290)
63 1igy_B IGG1 intact antibody MA 99.9 1.9E-28 6.4E-33 313.7 10.9 362 96-657 5-424 (434)
64 2y23_A Myomesin; structural pr 99.9 1.1E-26 3.8E-31 283.9 25.8 284 99-571 10-311 (312)
65 2y23_A Myomesin; structural pr 99.9 6.2E-26 2.1E-30 277.3 29.4 284 1706-2178 10-311 (312)
66 1ry7_B FGFR-3, fibroblast grow 99.9 9.3E-28 3.2E-32 296.3 12.4 181 90-276 9-217 (334)
67 2o26_X MAST/stem cell growth f 99.9 6.1E-26 2.1E-30 273.2 25.7 269 1695-2181 10-290 (290)
68 3ejj_X Macrophage colony-stimu 99.9 1.1E-25 3.7E-30 271.4 25.9 275 89-575 3-284 (289)
69 3o4o_C Interleukin-1 receptor 99.9 1E-26 3.5E-31 287.5 14.7 184 88-275 16-220 (339)
70 4fqp_A Poliovirus receptor; im 99.9 1.2E-25 4.1E-30 273.7 22.6 175 93-267 3-205 (313)
71 4fqp_A Poliovirus receptor; im 99.9 4.5E-25 1.6E-29 268.6 26.0 274 1702-2183 5-308 (313)
72 1ry7_B FGFR-3, fibroblast grow 99.9 1E-26 3.5E-31 287.0 10.8 174 1704-1882 15-216 (334)
73 3rjd_A High affinity immunoglo 99.9 1.1E-24 3.8E-29 258.2 27.6 166 90-276 1-168 (262)
74 3ejj_X Macrophage colony-stimu 99.9 1.2E-24 4E-29 262.4 28.2 276 1696-2183 3-285 (289)
75 3t1w_A Four-domain fibronectin 99.9 1.7E-23 5.8E-28 262.4 39.1 310 901-1373 2-315 (375)
76 1igt_B IGG2A intact antibody - 99.9 3.9E-25 1.3E-29 284.1 24.3 220 44-265 78-331 (444)
77 4dep_C Interleukin-1 receptor 99.9 1.1E-25 3.8E-30 279.4 17.9 174 96-275 13-217 (349)
78 1hzh_H IGG, immunoglobulin hea 99.9 8.4E-25 2.9E-29 282.0 26.2 219 44-264 78-339 (457)
79 3oq3_B IFN-alpha/beta binding 99.9 4.9E-25 1.7E-29 269.8 20.8 172 96-276 35-225 (329)
80 1itb_B Type 1 interleukin-1 re 99.9 2.7E-25 9.2E-30 271.6 18.0 161 98-265 13-189 (315)
81 2wng_A Tyrosine-protein phosph 99.9 5.2E-25 1.8E-29 270.1 20.4 175 90-264 3-205 (327)
82 4dkd_C Macrophage colony-stimu 99.9 4.4E-25 1.5E-29 266.5 19.0 273 89-574 3-283 (292)
83 1fnf_A Fibronectin; RGD, extra 99.9 3.3E-23 1.1E-27 259.1 36.7 307 901-1373 1-313 (368)
84 1zvo_C Myeloma immunoglobulin 99.9 3.1E-23 1.1E-27 268.8 36.9 412 96-667 6-504 (512)
85 3o4o_C Interleukin-1 receptor 99.9 1.3E-25 4.5E-30 277.5 12.8 182 1696-1881 17-219 (339)
86 4dep_C Interleukin-1 receptor 99.9 5.6E-25 1.9E-29 273.1 18.6 170 1704-1881 14-216 (349)
87 2oz4_A Intercellular adhesion 99.9 3E-24 1E-28 253.8 22.1 167 88-275 4-182 (265)
88 3u83_A Poliovirus receptor-rel 99.9 1.5E-24 5.3E-29 267.2 20.1 273 89-575 13-323 (331)
89 3vh8_G Killer cell immunoglobu 99.9 3E-24 1E-28 261.5 22.0 169 88-264 22-199 (316)
90 3rjd_A High affinity immunoglo 99.9 1.5E-23 5.2E-28 248.4 25.9 164 1697-1881 1-166 (262)
91 3oq3_B IFN-alpha/beta binding 99.9 1.6E-23 5.6E-28 256.3 26.4 171 492-666 140-328 (329)
92 2a38_A Titin; Z1Z2, structural 99.9 9.7E-24 3.3E-28 236.4 22.1 187 88-274 3-194 (194)
93 2wng_A Tyrosine-protein phosph 99.9 6.5E-24 2.2E-28 260.3 21.6 173 1698-1870 4-204 (327)
94 3mjg_X Beta-type platelet-deri 99.9 1.3E-23 4.3E-28 253.0 23.5 268 91-578 1-284 (289)
95 1iga_A IGA1; immunoglobulin; N 99.9 1.1E-22 3.8E-27 263.1 34.1 221 43-266 78-336 (475)
96 3u83_A Poliovirus receptor-rel 99.9 9.6E-24 3.3E-28 260.1 22.9 272 1697-2183 14-324 (331)
97 1igy_B IGG1 intact antibody MA 99.9 4.9E-25 1.7E-29 282.0 11.2 211 44-264 77-320 (434)
98 1itb_B Type 1 interleukin-1 re 99.9 8.1E-24 2.8E-28 258.4 21.6 171 1707-1881 113-313 (315)
99 4dkd_C Macrophage colony-stimu 99.9 8E-24 2.7E-28 255.5 20.9 275 1696-2182 3-284 (292)
100 1i1r_A GP130, interleukin-6 re 99.9 2.7E-23 9.1E-28 250.4 24.8 272 586-1000 14-302 (303)
101 2j8h_A Titin, connectin; cardi 99.9 4.5E-23 1.5E-27 231.5 23.3 188 88-275 2-197 (197)
102 2oz4_A Intercellular adhesion 99.9 3.4E-23 1.2E-27 244.7 23.0 157 1696-1873 5-170 (265)
103 3lcy_A Titin; A-BAND, IG tande 99.9 8.1E-23 2.8E-27 229.8 24.5 188 88-275 5-196 (197)
104 3mjg_X Beta-type platelet-deri 99.9 8.1E-23 2.8E-27 245.9 25.8 269 1698-2184 1-283 (289)
105 4fom_A Poliovirus receptor-rel 99.9 1.4E-23 4.7E-28 255.2 18.1 171 492-671 126-303 (308)
106 2yd6_A PTPRD protein; hydrolas 99.9 2.4E-22 8.3E-27 227.9 24.9 190 88-277 4-206 (212)
107 4fom_A Poliovirus receptor-rel 99.9 8.1E-24 2.8E-28 257.2 13.5 226 43-278 72-303 (308)
108 3rbs_A Myomesin-1; immunoglobu 99.9 7.2E-23 2.5E-27 228.4 20.0 179 90-274 3-206 (207)
109 2yd1_A Tyrosine-protein phosph 99.9 3E-22 1E-26 227.3 25.1 190 88-280 4-205 (212)
110 3vh8_G Killer cell immunoglobu 99.9 1.5E-22 5.2E-27 246.4 21.6 252 11-277 42-315 (316)
111 2c5d_C AXL oncogene, tyrosine- 99.9 5.7E-22 2E-26 221.8 23.9 178 89-273 1-191 (195)
112 2d9q_B Granulocyte colony-stim 99.9 2.6E-22 9E-27 242.8 22.7 278 586-1003 10-311 (313)
113 2wv3_A Neuroplastin; igcam, me 99.9 8.3E-22 2.8E-26 219.2 24.2 179 89-274 2-189 (190)
114 2iep_A Muscle-specific kinase 99.9 2.2E-22 7.7E-27 224.8 17.8 185 88-277 5-192 (192)
115 4fa8_A Secreted protein BARF1; 99.9 6.6E-23 2.2E-27 226.6 12.2 169 99-267 2-194 (203)
116 1zvo_C Myeloma immunoglobulin 99.9 2.2E-20 7.4E-25 242.1 36.0 220 44-264 79-386 (512)
117 2v44_A NCAM2, neural cell adhe 99.9 2.4E-21 8.1E-26 215.6 23.0 178 92-273 4-185 (189)
118 1rhf_A Tyrosine-protein kinase 99.9 2.9E-21 9.9E-26 213.3 22.6 176 90-274 2-182 (182)
119 3r8q_A Fibronectin; heparin, F 99.9 9E-21 3.1E-25 227.2 28.5 264 667-1119 18-283 (290)
120 1za6_B IGG heavy chain; immuno 99.9 2.5E-21 8.7E-26 238.3 24.3 168 96-269 6-211 (344)
121 2r15_A Myomesin-1; sarcomeric 99.9 3.5E-21 1.2E-25 219.2 22.7 174 103-276 15-211 (212)
122 2va4_A NCAM2, N-CAM 2, neural 99.9 3.3E-21 1.1E-25 215.4 22.1 182 90-274 2-192 (192)
123 2a38_A Titin; Z1Z2, structural 99.9 6.1E-21 2.1E-25 213.5 22.7 186 1696-1881 4-194 (194)
124 1epf_A NCAM, protein (neural c 99.9 4.3E-21 1.5E-25 214.0 21.3 183 90-273 2-189 (191)
125 3se4_A Interferon alpha/beta r 99.9 2.6E-21 8.8E-26 243.4 21.0 362 670-1319 8-402 (414)
126 1tdq_A Tenascin-R; extracellul 99.9 2.1E-20 7.2E-25 223.4 27.4 265 663-1120 8-277 (283)
127 3r8q_A Fibronectin; heparin, F 99.9 3.4E-20 1.2E-24 222.2 29.0 265 900-1318 19-285 (290)
128 2j8h_A Titin, connectin; cardi 99.9 2.1E-20 7.2E-25 209.7 24.9 186 1696-1881 3-196 (197)
129 2wqr_A IG epsilon chain C regi 99.9 2.9E-21 9.8E-26 235.6 18.2 175 89-263 6-202 (323)
130 2v5t_A NCAM2, N-CAM 2, neural 99.9 5E-21 1.7E-25 213.2 18.6 180 90-274 2-187 (189)
131 1tdq_A Tenascin-R; extracellul 99.9 6.5E-20 2.2E-24 219.2 28.9 267 899-1319 12-279 (283)
132 3lcy_A Titin; A-BAND, IG tande 99.9 1.6E-20 5.5E-25 210.9 22.1 191 478-668 5-196 (197)
133 2dtg_E Insulin receptor; IR ec 99.9 1.5E-21 5E-26 268.4 15.1 363 903-1320 470-882 (897)
134 3grw_A Fibroblast growth facto 99.8 8E-21 2.7E-25 221.3 18.4 195 88-284 9-227 (241)
135 1n26_A IL-6 receptor alpha cha 99.8 1.9E-19 6.3E-24 218.4 29.7 267 586-997 16-295 (325)
136 3sgj_C Human FCG3A receptor; r 99.8 1E-20 3.5E-25 211.1 16.9 172 89-281 6-180 (204)
137 2c1o_A IGK-C protein; FAB frag 99.8 6.9E-21 2.4E-25 223.3 15.5 202 52-264 11-244 (254)
138 2dtg_E Insulin receptor; IR ec 99.8 3.9E-21 1.3E-25 264.2 15.1 289 671-1128 470-887 (897)
139 3rbs_A Myomesin-1; immunoglobu 99.8 4.5E-20 1.5E-24 205.7 20.8 179 1697-1881 3-206 (207)
140 2yd1_A Tyrosine-protein phosph 99.8 1.4E-19 4.9E-24 205.2 24.9 189 1695-1887 4-205 (212)
141 2v9r_A Roundabout homolog 1; p 99.8 1.4E-20 4.9E-25 214.2 16.5 191 88-281 7-208 (212)
142 2wv3_A Neuroplastin; igcam, me 99.8 1.7E-19 5.7E-24 200.5 24.5 179 1696-1881 2-189 (190)
143 2yd6_A PTPRD protein; hydrolas 99.8 1.9E-19 6.6E-24 203.9 25.1 189 1696-1884 5-206 (212)
144 2vr9_A Roundabout 1, ROBO; imm 99.8 1.2E-20 4E-25 215.5 15.0 185 88-275 7-206 (217)
145 3ojm_B Fibroblast growth facto 99.8 3E-20 1E-24 215.0 18.5 191 89-281 14-227 (231)
146 3k0w_A Mucosa-associated lymph 99.8 5.1E-20 1.7E-24 209.5 19.6 172 88-277 16-204 (218)
147 1i1r_A GP130, interleukin-6 re 99.8 1.7E-19 5.8E-24 217.1 25.1 275 1796-2080 10-298 (303)
148 1f97_A Junction adhesion molec 99.8 1.5E-20 5.2E-25 214.1 15.1 181 91-275 2-207 (212)
149 4fa8_A Secreted protein BARF1; 99.8 1.3E-20 4.3E-25 208.3 13.2 170 1706-1875 2-195 (203)
150 2c5d_C AXL oncogene, tyrosine- 99.8 1.9E-19 6.4E-24 201.3 22.9 178 1696-1880 1-191 (195)
151 3l5i_A Interleukin-6 receptor 99.8 1.6E-19 5.5E-24 216.7 22.9 272 668-1124 2-285 (290)
152 1za6_B IGG heavy chain; immuno 99.8 8.8E-20 3E-24 224.5 20.0 164 491-658 131-331 (344)
153 1fnl_A Low affinity immunoglob 99.8 9.4E-20 3.2E-24 198.7 17.8 167 88-275 5-174 (175)
154 2wqr_A IG epsilon chain C regi 99.8 4.7E-20 1.6E-24 224.9 16.7 165 488-657 121-309 (323)
155 2ifg_A High affinity nerve gro 99.8 8.7E-21 3E-25 233.4 9.5 204 56-277 136-347 (347)
156 3p2t_A Leukocyte immunoglobuli 99.8 8.5E-20 2.9E-24 203.7 16.4 181 89-274 4-195 (196)
157 3b5h_A Cervical EMMPRIN, HAB18 99.8 5.9E-19 2E-23 195.0 22.8 166 100-275 8-183 (184)
158 3uto_A Twitchin; kinase, muscl 99.8 3.7E-20 1.3E-24 238.4 14.9 231 666-899 6-236 (573)
159 2iep_A Muscle-specific kinase 99.8 1.2E-19 4.1E-24 202.6 16.8 184 1696-1884 6-192 (192)
160 2r15_A Myomesin-1; sarcomeric 99.8 9.6E-19 3.3E-23 198.9 24.2 173 1710-1882 15-210 (212)
161 2v44_A NCAM2, neural cell adhe 99.8 5E-19 1.7E-23 196.7 21.1 178 1699-1880 4-185 (189)
162 3bp6_B Programmed cell death 1 99.8 1.1E-19 3.8E-24 204.3 15.6 182 93-277 5-195 (202)
163 2x1w_L Vascular endothelial gr 99.8 1.4E-19 4.8E-24 204.7 16.4 179 96-278 13-210 (213)
164 1vca_A VCAM-D1,2, human vascul 99.8 1.9E-19 6.6E-24 200.4 17.2 179 95-278 5-200 (202)
165 2va4_A NCAM2, N-CAM 2, neural 99.8 1.5E-18 5E-23 193.8 24.2 181 1697-1880 2-191 (192)
166 3l5i_A Interleukin-6 receptor 99.8 4.8E-19 1.7E-23 212.5 21.4 265 900-1316 2-280 (290)
167 1rhf_A Tyrosine-protein kinase 99.8 7.9E-19 2.7E-23 193.6 21.3 175 1697-1880 2-181 (182)
168 1epf_A NCAM, protein (neural c 99.8 9.8E-19 3.4E-23 194.8 22.1 183 1697-1880 2-189 (191)
169 1f2q_A High affinity immunoglo 99.8 1.1E-19 3.7E-24 198.6 14.0 169 89-278 3-174 (176)
170 3jz7_A MCAR, CAR, coxsackievir 99.8 4.7E-20 1.6E-24 210.5 11.2 180 93-276 3-213 (214)
171 1uct_A Immunoglobulin alpha FC 99.8 1.1E-19 3.8E-24 204.8 13.9 182 88-277 7-200 (218)
172 2d3v_A Leukocyte immunoglobuli 99.8 5.4E-20 1.9E-24 205.1 11.3 170 89-263 4-180 (196)
173 3se4_A Interferon alpha/beta r 99.8 3E-19 1E-23 224.5 18.7 320 901-1374 7-355 (414)
174 3s97_C Contactin-1; carbonic a 99.8 3.1E-19 1.1E-23 201.2 15.6 178 91-274 9-200 (201)
175 3mj8_L Stimulatory hamster ant 99.8 4.5E-19 1.5E-23 201.5 16.7 179 91-270 2-208 (213)
176 1nbq_A JAM, junctional adhesio 99.8 4.2E-20 1.4E-24 209.9 7.9 182 89-274 3-208 (209)
177 1ugn_A LIR1, leukocyte immunog 99.8 1.5E-19 5.1E-24 202.1 12.2 180 89-274 4-197 (198)
178 3ry4_A Low affinity immunoglob 99.8 1.2E-18 4E-23 189.6 18.6 164 89-273 3-169 (170)
179 2q7n_A Leukemia inhibitory fac 99.8 3.3E-18 1.1E-22 212.5 24.3 266 586-1000 213-487 (488)
180 2ny1_B T-cell surface glycopro 99.8 3.1E-19 1.1E-23 196.9 13.5 163 99-279 4-183 (184)
181 1oll_A NK receptor; immune sys 99.8 6.1E-19 2.1E-23 194.6 14.9 177 89-274 3-187 (188)
182 2v5t_A NCAM2, N-CAM 2, neural 99.8 2.7E-18 9.1E-23 191.1 19.6 180 1697-1881 2-187 (189)
183 3r4d_A CEA-related cell adhesi 99.8 1.3E-18 4.4E-23 197.1 17.0 177 94-278 3-203 (208)
184 2d9q_B Granulocyte colony-stim 99.8 3.8E-18 1.3E-22 206.3 21.4 276 1797-2080 7-304 (313)
185 3lpw_A A77-A78 domain from tit 99.8 6.3E-18 2.2E-22 189.4 21.4 192 899-1127 3-194 (197)
186 1hng_A CD2; T lymphocyte adhes 99.8 4.1E-19 1.4E-23 192.6 11.2 156 99-273 5-174 (176)
187 2gi7_A GPVI protein; IG-like d 99.8 9.9E-19 3.4E-23 192.1 14.1 157 89-263 7-168 (184)
188 3d9a_L Light chain of hyhel10 99.8 1E-18 3.4E-23 198.6 14.2 173 93-265 4-203 (213)
189 3grw_A Fibroblast growth facto 99.8 2.7E-18 9.2E-23 199.8 17.7 195 1696-1890 10-226 (241)
190 3sgj_C Human FCG3A receptor; r 99.8 2.4E-18 8.4E-23 191.8 16.2 172 1696-1888 6-180 (204)
191 3mtr_A N-CAM-1, NCAM-1, neural 99.8 1.9E-17 6.5E-22 188.0 22.9 176 586-762 28-210 (215)
192 3nl4_L Antigen binding fragmen 99.8 3.7E-18 1.3E-22 193.9 16.9 169 91-259 2-198 (213)
193 1f3r_B FV antibody fragment; I 99.8 5.3E-18 1.8E-22 198.3 18.7 184 97-280 7-250 (257)
194 2fbo_J V1V2;, variable region- 99.8 2.5E-18 8.5E-23 201.5 15.8 178 93-272 5-249 (250)
195 4f80_A Butyrophilin subfamily 99.8 5.8E-18 2E-22 194.1 18.3 179 96-276 10-214 (226)
196 3mtr_A N-CAM-1, NCAM-1, neural 99.8 1.8E-17 6.2E-22 188.1 22.2 183 182-367 18-206 (215)
197 1lk3_L 9D7 light chain; antige 99.8 3.3E-18 1.1E-22 193.6 16.0 172 93-265 4-202 (210)
198 3sbw_C Programmed cell death 1 99.8 5.7E-18 1.9E-22 194.1 17.7 184 94-278 5-214 (222)
199 1nqb_A Single-chain antibody f 99.8 1.4E-17 4.9E-22 193.9 21.2 182 96-277 6-235 (256)
200 3ojm_B Fibroblast growth facto 99.8 6.4E-18 2.2E-22 195.4 18.2 191 1696-1888 14-227 (231)
201 2vr9_A Roundabout 1, ROBO; imm 99.8 4.2E-18 1.4E-22 194.2 16.2 185 1695-1882 7-206 (217)
202 3tv3_L PGT128 light chain, IG 99.8 2.3E-18 8E-23 195.1 13.6 176 91-269 2-205 (211)
203 2vkw_A Neural cell adhesion mo 99.8 7.7E-18 2.6E-22 189.9 17.8 187 898-1122 5-196 (209)
204 3s96_B 3B5H10 FAB light chain; 99.8 6.3E-18 2.1E-22 193.0 17.1 178 91-269 2-214 (218)
205 1f97_A Junction adhesion molec 99.8 3.5E-18 1.2E-22 194.4 14.8 181 1698-1882 2-207 (212)
206 3k0w_A Mucosa-associated lymph 99.7 1.5E-17 5.2E-22 189.0 19.0 171 1695-1883 16-203 (218)
207 2ghw_B Anti-SARS SCFV antibody 99.7 2.3E-17 7.8E-22 192.3 20.9 177 98-274 10-241 (247)
208 1p6f_A NKP46, natural cytotoxi 99.7 7.5E-18 2.6E-22 192.4 16.1 184 89-281 6-197 (242)
209 1jbj_A CD3 epsilon and gamma e 99.7 1.5E-18 5E-23 190.6 9.7 144 101-265 10-179 (186)
210 1nkr_A P58-CL42 KIR; inhibitor 99.7 1.1E-17 3.7E-22 187.2 16.8 168 89-262 7-184 (201)
211 3p4l_A Neogenin; iron homeosta 99.7 2.3E-17 7.8E-22 186.3 18.5 194 900-1127 3-202 (211)
212 3f7q_A Integrin beta-4, GP150; 99.7 3.5E-17 1.2E-21 187.9 20.3 199 900-1136 4-206 (234)
213 2v9r_A Roundabout homolog 1; p 99.7 1.5E-17 5.2E-22 189.1 17.2 189 1696-1887 8-207 (212)
214 1cfb_A Drosophila neuroglian; 99.7 5.3E-17 1.8E-21 182.4 21.3 185 898-1120 2-193 (205)
215 3auv_A SC-DSFV derived from th 99.7 3.9E-17 1.3E-21 193.1 20.8 189 89-277 11-256 (276)
216 1q0x_L FAB 9B1, light chain; a 99.7 1.4E-17 4.7E-22 188.9 16.2 175 93-268 4-208 (212)
217 3r06_A Anti-mouse CD3epsilon a 99.7 1.2E-17 4.3E-22 189.5 15.8 174 91-264 2-202 (213)
218 3uzq_A Anti-dengue MAB 4E11; d 99.7 3.4E-17 1.2E-21 191.2 19.7 188 93-280 4-249 (253)
219 2c1o_A IGK-C protein; FAB frag 99.7 8.5E-18 2.9E-22 196.9 14.0 203 1659-1872 11-245 (254)
220 3b5h_A Cervical EMMPRIN, HAB18 99.7 1.2E-16 4E-21 176.5 22.3 165 1707-1881 8-182 (184)
221 3esu_F Antibody 14B7* light ch 99.7 6.5E-17 2.2E-21 188.8 21.1 171 90-260 4-231 (250)
222 3lpw_A A77-A78 domain from tit 99.7 1.3E-16 4.6E-21 178.5 22.8 190 666-992 2-192 (197)
223 1cfb_A Drosophila neuroglian; 99.7 1E-16 3.5E-21 180.0 21.9 194 666-999 2-203 (205)
224 2pet_A Lutheran blood group gl 99.7 8.6E-18 2.9E-22 194.1 13.0 176 95-273 5-229 (231)
225 3juy_B 3B3 single chain varian 99.7 7.1E-17 2.4E-21 188.9 20.7 176 88-263 4-244 (256)
226 1nfd_E H57 FAB; complex (immun 99.7 3.1E-18 1.1E-22 194.3 8.9 172 93-265 3-202 (212)
227 1moe_A Anti-CEA MAB T84.66; an 99.7 5.5E-17 1.9E-21 188.2 19.5 170 92-261 3-220 (240)
228 3bp6_B Programmed cell death 1 99.7 2.5E-17 8.4E-22 185.1 16.0 181 1700-1883 5-194 (202)
229 2q7n_A Leukemia inhibitory fac 99.7 3.8E-15 1.3E-19 185.1 36.7 411 904-1375 6-429 (488)
230 1fnl_A Low affinity immunoglob 99.7 3.6E-17 1.2E-21 178.1 16.5 166 1696-1882 6-174 (175)
231 3s98_A Interferon alpha/beta r 99.7 4.5E-17 1.5E-21 193.7 18.5 273 670-1127 4-300 (306)
232 4frw_A Poliovirus receptor-rel 99.7 2.4E-17 8.4E-22 188.7 15.6 179 96-274 5-210 (218)
233 3lb6_C IL-13, interleukin-13 r 99.7 1.2E-16 4.1E-21 196.0 22.6 310 642-1131 7-334 (380)
234 3jz7_A MCAR, CAR, coxsackievir 99.7 9.9E-18 3.4E-22 191.1 12.0 176 1703-1882 6-212 (214)
235 2p1y_A Bispecific alpha/beta T 99.7 3.3E-17 1.1E-21 189.8 16.6 170 92-262 2-222 (238)
236 3gkz_A Anti-methamphetamine si 99.7 1.3E-16 4.4E-21 186.9 21.8 191 90-280 8-254 (257)
237 2znx_A SCFV; fluorotryptohpan, 99.7 7.6E-17 2.6E-21 186.4 19.4 170 92-261 3-222 (242)
238 1n26_A IL-6 receptor alpha cha 99.7 5.2E-16 1.8E-20 188.0 27.5 274 1793-2080 9-294 (325)
239 3umt_A SCFV heavy chain and li 99.7 9.9E-17 3.4E-21 187.6 20.5 181 98-278 10-248 (256)
240 3p2t_A Leukocyte immunoglobuli 99.7 4.6E-17 1.6E-21 181.4 16.3 170 1696-1870 4-179 (196)
241 2ifg_A High affinity nerve gro 99.7 1.8E-17 6.2E-22 203.7 14.3 185 1694-1884 155-347 (347)
242 2ibg_A CG9211-PA, GH03927P; IH 99.7 1.2E-16 4.1E-21 181.2 19.7 193 902-1127 2-210 (214)
243 2vkw_A Neural cell adhesion mo 99.7 9.9E-17 3.4E-21 180.8 18.9 188 663-988 2-195 (209)
244 3s97_C Contactin-1; carbonic a 99.7 2.3E-17 7.9E-22 185.7 13.6 176 1700-1881 11-200 (201)
245 1f2q_A High affinity immunoglo 99.7 3.9E-17 1.3E-21 178.2 14.6 169 1696-1885 3-174 (176)
246 1vca_A VCAM-D1,2, human vascul 99.7 1.1E-16 3.9E-21 177.9 18.6 175 1707-1885 11-200 (202)
247 2if7_A SLAM family member 6; N 99.7 8E-17 2.7E-21 178.0 17.0 159 95-269 3-186 (193)
248 2d3v_A Leukocyte immunoglobuli 99.7 3.2E-17 1.1E-21 182.5 13.7 171 1696-1871 4-181 (196)
249 3sob_L Antibody light chain; b 99.7 9.3E-17 3.2E-21 186.2 18.0 177 90-266 24-227 (237)
250 2xzc_L FAB A.17 light chain; i 99.7 3.6E-17 1.2E-21 185.9 13.8 170 97-266 7-206 (216)
251 1b6u_A KIR2DL3, P58 killer cel 99.7 3.9E-17 1.3E-21 187.7 14.0 184 89-278 6-204 (257)
252 1qok_A MFE-23 recombinant anti 99.7 1.8E-16 6.1E-21 187.9 20.1 183 93-276 29-269 (282)
253 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.7 1.9E-16 6.6E-21 184.8 20.0 186 90-276 3-249 (256)
254 3knb_B Obscurin-like protein 1 99.7 7.4E-17 2.5E-21 155.9 13.4 96 2086-2181 12-107 (107)
255 2ny1_B T-cell surface glycopro 99.7 5.8E-17 2E-21 178.6 14.4 163 1706-1886 4-183 (184)
256 4i0k_A CD276 antigen; immunogl 99.7 1.5E-17 5.1E-22 190.5 10.0 179 99-279 4-210 (222)
257 2x1w_L Vascular endothelial gr 99.7 8.6E-17 2.9E-21 181.8 15.6 180 486-671 13-210 (213)
258 3mj8_L Stimulatory hamster ant 99.7 1.1E-16 3.9E-21 181.5 16.8 178 1699-1877 3-208 (213)
259 1c1e_H Catalytic antibody 1E9 99.7 7E-17 2.4E-21 184.0 15.0 175 96-271 6-216 (219)
260 3f7q_A Integrin beta-4, GP150; 99.7 2E-16 6.8E-21 181.6 18.6 219 668-1041 4-230 (234)
261 1svz_A Immunoglobulin;, single 99.7 3.2E-16 1.1E-20 182.4 20.6 170 92-261 3-228 (247)
262 1sy6_A T-cell surface glycopro 99.7 3.4E-17 1.1E-21 182.4 11.4 154 102-273 15-202 (204)
263 3bkj_L WO2 IGG2A FAB fragment 99.7 6.5E-17 2.2E-21 188.7 14.3 175 90-264 34-240 (252)
264 1nbq_A JAM, junctional adhesio 99.7 9.8E-18 3.4E-22 190.2 6.7 180 1697-1880 4-207 (209)
265 3mj6_A Junctional adhesion mol 99.7 3.9E-17 1.3E-21 193.5 12.2 184 90-278 5-240 (268)
266 3bpo_C Interleukin-13 receptor 99.7 2.6E-15 8.7E-20 181.1 28.2 282 670-1128 4-308 (314)
267 3ux9_B SCFV antibody; five hel 99.7 4.6E-16 1.6E-20 182.3 20.6 167 96-262 8-236 (256)
268 1uct_A Immunoglobulin alpha FC 99.7 9.4E-17 3.2E-21 180.8 14.1 181 1695-1883 7-199 (218)
269 3pv7_A B7-H6, IG-like domain-c 99.7 2.5E-16 8.6E-21 183.6 17.9 178 95-273 8-224 (248)
270 1ugn_A LIR1, leukocyte immunog 99.7 4.7E-17 1.6E-21 181.7 10.9 170 1696-1870 4-181 (198)
271 3ry4_A Low affinity immunoglob 99.7 4E-16 1.4E-20 169.4 17.9 164 1696-1880 3-169 (170)
272 3qib_D 2B4 beta chain; IG doma 99.7 9.9E-17 3.4E-21 189.4 14.1 198 52-264 3-244 (270)
273 1dr9_A B7-1 (CD80), T lymphocy 99.7 1.3E-16 4.5E-21 179.0 14.4 167 99-271 3-197 (201)
274 3r4d_A CEA-related cell adhesi 99.7 4E-16 1.4E-20 176.4 18.2 173 1704-1884 6-202 (208)
275 2ibg_A CG9211-PA, GH03927P; IH 99.7 1.2E-15 4E-20 173.0 22.0 187 670-988 2-204 (214)
276 2gjj_A A21 single-chain antibo 99.7 5.8E-16 2E-20 181.0 20.0 172 90-261 5-239 (264)
277 1hng_A CD2; T lymphocyte adhes 99.7 1.6E-16 5.5E-21 172.1 13.9 155 1707-1880 6-174 (176)
278 2zg1_A Sialic acid-binding IG- 99.7 1.4E-16 4.7E-21 181.2 13.8 169 95-272 5-210 (214)
279 1mju_H Immunoglobulin MS6-12; 99.7 2.4E-16 8.2E-21 179.8 15.5 184 96-280 6-222 (227)
280 3d9a_H Heavy chain of hyhel10 99.7 1.7E-16 5.8E-21 179.3 14.1 170 97-268 7-207 (210)
281 1q9r_B S25-2 FAB (IGG1K) heavy 99.7 2.1E-16 7.2E-21 180.4 15.1 175 97-272 7-220 (222)
282 1bqu_A Protein (GP130); cytoki 99.7 3.3E-16 1.1E-20 177.5 16.3 200 899-1135 5-208 (215)
283 2j6e_L IGM, FAB light chain; a 99.7 5E-17 1.7E-21 187.8 9.7 179 90-269 20-229 (234)
284 1oll_A NK receptor; immune sys 99.7 2.9E-16 1E-20 173.1 15.1 176 1696-1880 3-186 (188)
285 1gsm_A Madcam-1, mucosal addre 99.7 8.1E-16 2.8E-20 166.1 18.0 156 100-263 17-193 (210)
286 1hnf_A CD2; T lymphocyte adhes 99.7 2.4E-16 8.2E-21 169.9 13.9 154 97-272 6-178 (182)
287 3d9a_L Light chain of hyhel10 99.7 1.9E-16 6.6E-21 179.7 13.8 178 1700-1877 4-208 (213)
288 3p4l_A Neogenin; iron homeosta 99.7 1.5E-15 5E-20 171.5 20.6 184 668-988 3-196 (211)
289 3s98_A Interferon alpha/beta r 99.7 5.3E-16 1.8E-20 184.5 17.7 270 901-1319 3-295 (306)
290 4f80_A Butyrophilin subfamily 99.7 6.2E-16 2.1E-20 177.1 17.6 178 1703-1882 10-213 (226)
291 1ccz_A Protein (CD58); LFA-3, 99.7 1.4E-16 4.9E-21 170.9 11.0 150 99-272 4-168 (171)
292 2gki_A Nuclease; anti-DNA anti 99.7 1E-15 3.5E-20 182.0 19.5 182 96-277 28-274 (291)
293 4dzb_B Vbeta2 (MAIT T cell rec 99.7 5.2E-16 1.8E-20 180.6 16.3 174 92-265 3-221 (246)
294 3knb_B Obscurin-like protein 1 99.7 2.3E-16 7.9E-21 152.4 10.9 97 88-184 11-107 (107)
295 3bqu_C 3H6 FAB light chain; be 99.7 3.6E-17 1.2E-21 188.7 6.2 174 90-263 23-223 (233)
296 2fbo_J V1V2;, variable region- 99.7 3.6E-16 1.2E-20 183.1 14.8 177 1701-1879 6-249 (250)
297 3sbw_C Programmed cell death 1 99.7 1.5E-15 5.3E-20 173.7 19.1 182 1702-1884 6-213 (222)
298 1x9q_A SCFV, 4M5.3 anti-fluore 99.7 1E-15 3.4E-20 180.2 17.8 173 89-261 14-254 (268)
299 3fku_X Neutralizing antibody F 99.7 8.1E-16 2.8E-20 181.7 17.1 185 92-278 3-253 (280)
300 1lk3_L 9D7 light chain; antige 99.7 5.4E-16 1.8E-20 175.3 14.7 169 1704-1872 7-202 (210)
301 1mq8_A ICAM-1, intercellular a 99.7 2.7E-16 9.1E-21 181.6 12.3 155 95-263 4-166 (291)
302 2rgs_A I, IG gamma-2B heavy ch 99.7 1.6E-16 5.5E-21 179.8 10.3 175 89-263 8-204 (218)
303 3lb6_C IL-13, interleukin-13 r 99.6 1.6E-15 5.5E-20 185.9 19.8 287 901-1323 31-329 (380)
304 2vol_A Murine IGG FC; FC, zinc 99.6 2.1E-16 7.1E-21 177.4 11.0 171 93-263 5-196 (207)
305 1pz5_B Heavy chain of FAB (SYA 99.6 1.1E-15 3.6E-20 174.2 16.7 172 97-270 7-216 (220)
306 3nl4_L Antigen binding fragmen 99.6 1.3E-15 4.3E-20 172.9 17.2 169 1698-1866 2-198 (213)
307 3tv3_L PGT128 light chain, IG 99.6 4.9E-16 1.7E-20 175.9 13.8 174 1700-1876 4-205 (211)
308 3knb_A Titin; IG-like, titin, 99.6 8.8E-16 3E-20 146.5 13.2 95 2085-2179 3-99 (100)
309 3s96_B 3B5H10 FAB light chain; 99.6 1.1E-15 3.8E-20 174.2 16.5 177 1699-1876 3-214 (218)
310 1bqu_A Protein (GP130); cytoki 99.6 2.8E-16 9.6E-21 178.1 11.4 199 666-1003 4-209 (215)
311 3eow_R Poliovirus receptor; im 99.6 9.7E-17 3.3E-21 183.2 7.5 181 97-280 6-215 (221)
312 2gi7_A GPVI protein; IG-like d 99.6 2.8E-16 9.5E-21 172.5 10.8 157 1696-1870 7-168 (184)
313 1jbj_A CD3 epsilon and gamma e 99.6 2.5E-16 8.6E-21 172.8 10.4 145 1707-1872 9-179 (186)
314 3omz_A Human vdelta1 gamma del 99.6 5.2E-16 1.8E-20 181.9 13.7 189 90-278 2-253 (259)
315 1f3r_B FV antibody fragment; I 99.6 1.6E-15 5.6E-20 177.1 17.4 180 1705-1884 8-247 (257)
316 4fmk_A Poliovirus receptor-rel 99.6 3.9E-16 1.3E-20 179.7 12.0 178 98-275 9-219 (225)
317 1nqb_A Single-chain antibody f 99.6 4E-15 1.4E-19 173.1 20.5 178 1704-1881 7-232 (256)
318 1b6u_A KIR2DL3, P58 killer cel 99.6 1.3E-15 4.5E-20 174.9 15.7 120 490-615 116-241 (257)
319 2gys_A Cytokine receptor commo 99.6 3.9E-15 1.3E-19 187.4 21.3 285 901-1322 108-413 (419)
320 1dee_B IGM RF 2A2; FAB-IBP com 99.6 4.1E-15 1.4E-19 169.1 19.4 173 97-269 7-221 (223)
321 2fbj_H IGA-kappa J539 FAB (hea 99.6 2.2E-15 7.4E-20 171.0 16.8 169 97-266 7-212 (220)
322 3fl7_A Ephrin receptor; ATP-bi 99.6 6.1E-16 2.1E-20 193.1 12.7 215 641-997 304-531 (536)
323 1q0x_L FAB 9B1, light chain; a 99.6 2.5E-15 8.4E-20 170.2 16.7 173 1704-1876 7-209 (212)
324 1op3_H FAB 2G12, heavy chain; 99.6 1.7E-15 5.6E-20 172.8 15.2 167 97-265 7-215 (225)
325 1p6f_A NKP46, natural cytotoxi 99.6 2.5E-15 8.5E-20 171.5 16.2 184 1696-1888 6-197 (242)
326 3r06_A Anti-mouse CD3epsilon a 99.6 2E-15 6.9E-20 171.2 15.3 176 1698-1873 2-204 (213)
327 2ghw_B Anti-SARS SCFV antibody 99.6 5.5E-15 1.9E-19 172.1 19.3 177 1705-1881 10-241 (247)
328 3nl4_H Antigen binding fragmen 99.6 1.1E-15 3.9E-20 173.1 13.0 176 96-272 5-211 (215)
329 3bae_H WO2 IGG2A FAB fragment 99.6 2.1E-15 7.1E-20 172.4 15.0 173 97-270 7-221 (228)
330 3bpo_C Interleukin-13 receptor 99.6 1.7E-14 5.8E-19 173.9 23.4 268 901-1310 3-289 (314)
331 2dru_A Chimera of CD48 antigen 99.6 1.6E-15 5.5E-20 164.3 12.8 154 98-271 7-177 (180)
332 1qr4_A Protein (tenascin); fib 99.6 1.1E-14 3.9E-19 160.2 19.4 172 899-1119 4-175 (186)
333 2pet_A Lutheran blood group gl 99.6 2.4E-15 8.2E-20 173.5 14.7 175 1703-1880 6-229 (231)
334 1dn0_B IGM-kappa cold agglutin 99.6 8.1E-15 2.8E-19 167.5 18.8 179 97-275 7-227 (232)
335 1hxm_B Gamma-delta T-cell rece 99.6 6.2E-15 2.1E-19 170.1 17.8 181 91-273 2-227 (242)
336 3uzq_A Anti-dengue MAB 4E11; d 99.6 7.3E-15 2.5E-19 171.3 18.3 187 1701-1887 5-249 (253)
337 4frw_A Poliovirus receptor-rel 99.6 4.3E-15 1.5E-19 169.8 15.6 177 1704-1880 6-209 (218)
338 2if7_A SLAM family member 6; N 99.6 1.3E-14 4.6E-19 160.1 18.7 158 1704-1877 5-187 (193)
339 2ha1_A Fibronectin; beta sandw 99.6 6.5E-15 2.2E-19 164.5 15.9 178 903-1119 1-193 (201)
340 1nkr_A P58-CL42 KIR; inhibitor 99.6 6.2E-15 2.1E-19 164.6 15.7 168 1696-1869 7-184 (201)
341 3auv_A SC-DSFV derived from th 99.6 9.3E-15 3.2E-19 172.7 18.1 172 1697-1868 12-235 (276)
342 3juy_B 3B3 single chain varian 99.6 1.4E-14 4.9E-19 169.2 19.3 175 1696-1870 5-244 (256)
343 3e0g_A Leukemia inhibitory fac 99.6 6.7E-13 2.3E-17 163.0 34.6 264 584-1000 206-482 (483)
344 3knb_A Titin; IG-like, titin, 99.6 4.7E-15 1.6E-19 141.4 12.2 95 88-182 3-99 (100)
345 3uto_A Twitchin; kinase, muscl 99.6 3.6E-14 1.2E-18 182.8 24.2 92 2086-2177 481-572 (573)
346 1moe_A Anti-CEA MAB T84.66; an 99.6 1.1E-14 3.7E-19 168.8 17.5 169 1700-1868 4-220 (240)
347 2gys_A Cytokine receptor commo 99.6 3.5E-14 1.2E-18 178.7 23.6 306 640-1127 80-415 (419)
348 3q5y_A TCR N15 beta; IG, T cel 99.6 6.3E-15 2.2E-19 170.5 15.5 173 91-264 3-213 (240)
349 2xzc_L FAB A.17 light chain; i 99.6 4.3E-15 1.5E-19 168.8 13.6 171 1704-1874 7-207 (216)
350 4ei6_B Vbeta16 XV19 type II na 99.6 7.3E-15 2.5E-19 170.8 15.6 173 91-264 3-219 (245)
351 2gee_A Hypothetical protein; f 99.6 2.1E-14 7.3E-19 160.0 18.7 174 900-1120 22-197 (203)
352 1nfd_E H57 FAB; complex (immun 99.6 7.5E-16 2.6E-20 174.5 7.0 168 1704-1871 6-201 (212)
353 1qr4_A Protein (tenascin); fib 99.6 2.4E-14 8.3E-19 157.6 18.9 173 666-987 3-176 (186)
354 2znx_A SCFV; fluorotryptohpan, 99.6 1.5E-14 5E-19 167.2 17.9 170 1699-1868 3-222 (242)
355 3nfj_J T cell receptor beta ch 99.6 1E-14 3.4E-19 169.5 16.6 174 92-265 3-220 (245)
356 3umt_A SCFV heavy chain and li 99.6 1.9E-14 6.6E-19 168.1 19.0 180 1705-1884 10-247 (256)
357 3fl7_A Ephrin receptor; ATP-bi 99.6 5.7E-15 1.9E-19 184.3 15.3 189 900-1127 332-531 (536)
358 3esu_F Antibody 14B7* light ch 99.6 1.7E-14 6E-19 168.2 18.5 170 1698-1867 5-231 (250)
359 3pl6_D MBP peptide / T-cell re 99.6 6.8E-15 2.3E-19 173.6 15.1 174 90-264 26-241 (268)
360 3liz_H 4C3 monoclonal antibody 99.6 1.3E-14 4.4E-19 168.7 17.2 172 97-274 7-219 (253)
361 3m8o_H Immunoglobulin A1 heavy 99.6 1.7E-14 5.8E-19 164.2 17.9 162 97-265 7-213 (221)
362 3sob_L Antibody light chain; b 99.6 6.5E-15 2.2E-19 170.6 14.5 180 1697-1876 24-230 (237)
363 3gkz_A Anti-methamphetamine si 99.6 3.7E-14 1.2E-18 166.0 20.7 185 1702-1886 13-253 (257)
364 2p1y_A Bispecific alpha/beta T 99.6 1E-14 3.5E-19 168.7 15.7 169 1700-1869 3-222 (238)
365 2xqy_G A13-D6.3 monoclonal ant 99.6 1.3E-14 4.3E-19 168.4 16.4 169 96-265 12-215 (261)
366 3mj6_A Junctional adhesion mol 99.6 8.5E-15 2.9E-19 173.3 14.7 183 1697-1884 5-239 (268)
367 3bn9_D E2 FAB heavy chain; ant 99.6 1.1E-14 3.8E-19 167.7 14.9 168 97-265 7-220 (257)
368 1c5d_H Monoclonal antibody aga 99.6 1.5E-14 5E-19 163.5 15.5 171 97-269 7-210 (215)
369 1i1c_A IGG2A, IG gamma-2A chai 99.6 2E-15 6.9E-20 172.3 8.4 172 92-263 18-210 (239)
370 4i0k_A CD276 antigen; immunogl 99.6 9.9E-15 3.4E-19 166.9 14.2 178 489-671 4-209 (222)
371 2w59_A IGY FCU3-4; immunoglobu 99.6 2.8E-15 9.5E-20 171.1 9.3 173 90-263 12-216 (231)
372 1dr9_A B7-1 (CD80), T lymphocy 99.6 1.3E-14 4.3E-19 162.7 14.5 167 1706-1878 3-197 (201)
373 2gee_A Hypothetical protein; f 99.6 3.6E-14 1.2E-18 158.1 17.9 174 667-987 21-197 (203)
374 3shs_A HOC head outer capsid p 99.6 4.8E-13 1.6E-17 142.2 25.0 244 90-354 2-278 (304)
375 1l6x_A Immunoglobulin gamma-1 99.6 4.8E-15 1.7E-19 166.3 10.6 169 95-263 7-196 (207)
376 1qok_A MFE-23 recombinant anti 99.6 3E-14 1E-18 168.8 17.7 179 1703-1882 32-268 (282)
377 1svz_A Immunoglobulin;, single 99.6 5E-14 1.7E-18 163.8 19.3 169 1700-1868 4-228 (247)
378 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.6 4.1E-14 1.4E-18 165.0 18.5 173 1699-1872 5-236 (256)
379 1sy6_A T-cell surface glycopro 99.6 7.5E-15 2.6E-19 163.3 11.6 153 1709-1880 15-202 (204)
380 3bkj_L WO2 IGG2A FAB fragment 99.6 1E-14 3.5E-19 170.0 13.3 176 1697-1872 34-241 (252)
381 1mq8_A ICAM-1, intercellular a 99.6 2.1E-14 7.2E-19 165.7 15.5 170 492-672 98-286 (291)
382 1c1e_H Catalytic antibody 1E9 99.6 8.5E-15 2.9E-19 166.7 12.1 174 1704-1878 7-216 (219)
383 2wbj_D OB TCR; transmembrane, 99.5 2.3E-14 7.9E-19 169.6 15.2 175 90-264 24-245 (279)
384 2gjj_A A21 single-chain antibo 99.5 1E-13 3.5E-18 161.9 20.1 172 1697-1868 5-239 (264)
385 3ux9_B SCFV antibody; five hel 99.5 7.9E-14 2.7E-18 163.2 18.7 165 1705-1869 10-236 (256)
386 2j6e_L IGM, FAB light chain; a 99.5 5.4E-15 1.9E-19 170.6 8.6 176 1699-1875 22-228 (234)
387 3pv7_A B7-H6, IG-like domain-c 99.5 7.7E-14 2.6E-18 162.4 18.2 177 1703-1880 9-224 (248)
388 1hnf_A CD2; T lymphocyte adhes 99.5 6.2E-14 2.1E-18 151.1 15.7 154 1705-1880 7-179 (182)
389 4acp_A IG gamma-1 chain C regi 99.5 8.7E-15 3E-19 165.9 9.4 195 58-262 1-216 (240)
390 3qp3_A Titin; I-SET IG-like, s 99.5 7.4E-14 2.5E-18 135.6 14.6 96 2085-2180 6-101 (103)
391 2cqv_A MLCK, myosin light chai 99.5 6.6E-14 2.2E-18 138.8 14.3 101 2085-2185 5-105 (114)
392 3d9a_H Heavy chain of hyhel10 99.5 1.7E-14 5.8E-19 162.8 11.2 170 1704-1875 7-207 (210)
393 2zg1_A Sialic acid-binding IG- 99.5 2.4E-14 8.1E-19 162.6 12.4 168 1703-1879 6-212 (214)
394 3qib_D 2B4 beta chain; IG doma 99.5 4.9E-14 1.7E-18 166.2 15.1 198 1660-1872 4-245 (270)
395 1q9r_B S25-2 FAB (IGG1K) heavy 99.5 2.4E-14 8.2E-19 163.2 12.0 173 1705-1878 8-219 (222)
396 4dzb_B Vbeta2 (MAIT T cell rec 99.5 7.5E-14 2.6E-18 162.3 16.4 175 1699-1873 3-222 (246)
397 1ccz_A Protein (CD58); LFA-3, 99.5 3.1E-14 1.1E-18 152.7 12.0 153 1706-1879 4-168 (171)
398 1mju_H Immunoglobulin MS6-12; 99.5 3.6E-14 1.2E-18 161.6 13.3 183 1704-1887 7-222 (227)
399 2e7c_A Myosin-binding protein 99.5 1E-13 3.6E-18 138.2 15.0 113 2066-2181 2-117 (118)
400 1gsm_A Madcam-1, mucosal addre 99.5 1.7E-13 6E-18 147.9 17.4 156 1707-1870 17-193 (210)
401 2gki_A Nuclease; anti-DNA anti 99.5 2.7E-13 9.1E-18 161.1 20.3 166 1704-1869 29-258 (291)
402 2rgs_A I, IG gamma-2B heavy ch 99.5 1.8E-14 6.2E-19 162.9 9.4 176 1696-1871 8-205 (218)
403 3irg_B Obscurin-like protein 1 99.5 9.6E-14 3.3E-18 136.1 13.3 98 2084-2181 10-107 (107)
404 2yuz_A Myosin-binding protein 99.5 3.6E-14 1.2E-18 135.3 9.9 94 2085-2182 5-98 (100)
405 3omz_A Human vdelta1 gamma del 99.5 7.3E-14 2.5E-18 163.6 14.7 172 1697-1868 2-231 (259)
406 1waa_A Titin; metal binding pr 99.5 8.4E-14 2.9E-18 130.2 11.9 90 2085-2179 3-92 (93)
407 1cd9_B G-CSF-R, protein (G-CSF 99.5 2.3E-13 8E-18 153.8 18.0 194 900-1132 3-213 (215)
408 1x9q_A SCFV, 4M5.3 anti-fluore 99.5 1.6E-13 5.6E-18 161.3 17.3 173 1696-1868 14-254 (268)
409 1bec_A 14.3.D T cell antigen r 99.5 6.6E-14 2.2E-18 161.2 13.6 169 93-262 2-210 (238)
410 2cqv_A MLCK, myosin light chai 99.5 1.8E-13 6.2E-18 135.6 14.9 104 182-285 6-109 (114)
411 3fku_X Neutralizing antibody F 99.5 1.4E-13 4.9E-18 162.3 16.8 180 1704-1884 7-252 (280)
412 1g1c_A Immunoglobulin-like dom 99.5 2E-13 6.9E-18 131.4 14.6 94 2086-2179 4-98 (99)
413 2yuz_A Myosin-binding protein 99.5 7.4E-14 2.5E-18 133.1 11.3 94 88-185 5-98 (100)
414 1ypz_F T-cell receptor gamma c 99.5 1.5E-13 5.1E-18 156.8 15.6 170 93-264 4-216 (230)
415 1pz5_B Heavy chain of FAB (SYA 99.5 1.2E-13 4.2E-18 157.1 14.8 168 1704-1877 7-216 (220)
416 2vol_A Murine IGG FC; FC, zinc 99.5 3.6E-14 1.2E-18 159.0 10.1 168 1703-1870 8-196 (207)
417 4fmk_A Poliovirus receptor-rel 99.5 5.7E-14 1.9E-18 161.4 12.0 177 1705-1881 9-218 (225)
418 3puc_A Titin; I-SET IG-like do 99.5 2.4E-13 8.4E-18 130.9 14.5 95 2085-2179 4-98 (99)
419 3n06_B PRL-R, prolactin recept 99.5 4.7E-13 1.6E-17 150.3 19.0 192 668-1000 2-205 (210)
420 2dru_A Chimera of CD48 antigen 99.5 1.6E-13 5.4E-18 148.7 14.3 154 1705-1878 7-177 (180)
421 3bqu_C 3H6 FAB light chain; be 99.5 4.4E-15 1.5E-19 171.2 2.0 174 1697-1870 23-223 (233)
422 1dee_B IGM RF 2A2; FAB-IBP com 99.5 3.9E-13 1.3E-17 152.7 18.1 172 1705-1876 8-221 (223)
423 3qhz_H Human monoclonal antibo 99.5 2.5E-13 8.5E-18 155.7 16.5 171 98-274 8-228 (232)
424 3to4_D NKT vbeta2 (mouse varia 99.5 9.5E-14 3.2E-18 161.6 12.7 169 93-262 4-217 (253)
425 3eow_R Poliovirus receptor; im 99.5 4.5E-14 1.6E-18 160.9 9.4 181 487-673 6-215 (221)
426 3e0g_A Leukemia inhibitory fac 99.5 8.7E-11 3E-15 144.4 38.8 401 914-1375 8-424 (483)
427 3d85_D IL-12B, interleukin-12 99.5 7.8E-13 2.7E-17 155.8 20.0 253 481-758 7-302 (306)
428 1cd9_B G-CSF-R, protein (G-CSF 99.5 5.3E-13 1.8E-17 150.8 17.8 194 668-1000 3-214 (215)
429 1waa_A Titin; metal binding pr 99.5 2.5E-13 8.6E-18 127.0 12.4 91 88-183 3-93 (93)
430 3n06_B PRL-R, prolactin recept 99.5 6.1E-13 2.1E-17 149.4 17.9 186 900-1125 2-200 (210)
431 1dn0_B IGM-kappa cold agglutin 99.5 6.4E-13 2.2E-17 151.7 18.2 177 1705-1881 8-226 (232)
432 3bae_H WO2 IGG2A FAB fragment 99.5 1.5E-13 5E-18 157.0 12.8 173 1704-1877 7-221 (228)
433 2ha1_A Fibronectin; beta sandw 99.5 4.4E-13 1.5E-17 149.6 16.3 188 672-987 2-194 (201)
434 3tv3_H PGT128 heavy chain, IG 99.5 4.4E-13 1.5E-17 153.9 16.6 176 97-273 7-235 (239)
435 2fbj_H IGA-kappa J539 FAB (hea 99.5 2.8E-13 9.5E-18 153.5 14.7 168 1705-1873 8-212 (220)
436 1op3_H FAB 2G12, heavy chain; 99.5 1.7E-13 5.7E-18 156.1 12.6 168 1705-1873 8-216 (225)
437 3qp3_A Titin; I-SET IG-like, s 99.5 2.8E-13 9.7E-18 131.5 12.4 97 88-184 6-102 (103)
438 1u2h_A APEG-1, aortic preferen 99.5 3.9E-13 1.3E-17 129.4 13.2 94 2086-2179 4-98 (99)
439 1wit_A Twitchin 18TH IGSF modu 99.5 2.2E-13 7.6E-18 128.9 11.1 90 2087-2178 2-93 (93)
440 2lu7_A Obscurin-like protein 1 99.5 1E-13 3.4E-18 126.1 8.3 82 2094-2180 3-84 (84)
441 2kkq_A Myotilin; unknown funct 99.5 3E-13 1E-17 133.7 12.4 101 2084-2184 12-114 (116)
442 2kdg_A Myotilin; immonoglobuli 99.4 2.6E-13 9E-18 130.9 11.3 95 2086-2180 4-99 (100)
443 3u2s_H PG9 heavy chain; greek 99.4 5.8E-13 2E-17 153.1 16.1 172 96-273 5-236 (248)
444 1ypz_E T cell receptor delta, 99.4 7.5E-13 2.6E-17 147.5 15.9 168 93-265 4-199 (207)
445 3q5y_A TCR N15 beta; IG, T cel 99.4 5.8E-13 2E-17 153.9 15.6 172 1699-1871 4-213 (240)
446 3nl4_H Antigen binding fragmen 99.4 1.5E-13 5E-18 155.7 10.1 175 1704-1879 6-211 (215)
447 3irg_B Obscurin-like protein 1 99.4 2.9E-13 1E-17 132.6 10.9 97 88-184 11-107 (107)
448 1oga_E TRBC1, T-cell receptor 99.4 2.9E-13 1E-17 157.2 12.8 173 91-264 4-218 (252)
449 1hxm_B Gamma-delta T-cell rece 99.4 8.5E-13 2.9E-17 152.1 16.4 179 1700-1880 4-227 (242)
450 2bk8_A Connectin, M1, titin he 99.4 8.3E-13 2.8E-17 126.3 13.3 91 2089-2179 3-94 (97)
451 2edj_A Roundabout homolog 2; K 99.4 2.9E-13 9.9E-18 130.5 10.2 95 2084-2181 5-100 (100)
452 3pl6_D MBP peptide / T-cell re 99.4 7.2E-13 2.5E-17 156.1 15.5 174 1697-1871 26-241 (268)
453 2lvc_A Obscurin-like protein 1 99.4 1.6E-13 5.5E-18 127.0 7.7 86 2087-2177 4-91 (91)
454 4ei6_B Vbeta16 XV19 type II na 99.4 1E-12 3.4E-17 152.6 16.2 173 1698-1871 3-219 (245)
455 3irg_A Titin; IG-like, titin, 99.4 7.5E-13 2.6E-17 127.9 12.6 93 2086-2178 4-98 (100)
456 2lu7_A Obscurin-like protein 1 99.4 3.9E-13 1.3E-17 122.2 9.6 83 96-183 2-84 (84)
457 3nfj_J T cell receptor beta ch 99.4 9.8E-13 3.4E-17 152.6 15.7 174 1700-1873 4-221 (245)
458 1nct_A Titin; cell adhesion, g 99.4 2.6E-13 8.8E-18 131.6 8.8 95 2084-2178 11-105 (106)
459 1ow0_A IG alpha-1 chain C regi 99.4 3.2E-14 1.1E-18 160.3 2.5 171 90-262 3-198 (214)
460 1g1c_A Immunoglobulin-like dom 99.4 9.5E-13 3.2E-17 126.7 12.4 94 89-182 4-98 (99)
461 2kkq_A Myotilin; unknown funct 99.4 1.3E-12 4.3E-17 129.3 13.5 99 88-186 13-113 (116)
462 2e7c_A Myosin-binding protein 99.4 8.9E-13 3E-17 131.4 12.4 95 89-184 20-117 (118)
463 3puc_A Titin; I-SET IG-like do 99.4 9.5E-13 3.2E-17 126.8 12.2 94 89-182 5-98 (99)
464 2dm2_A Palladin; beta-sandwich 99.4 4.8E-13 1.6E-17 131.6 10.1 98 2085-2182 6-105 (110)
465 3o3u_N Maltose-binding peripla 99.4 4.6E-13 1.6E-17 178.5 12.9 163 98-263 374-565 (581)
466 3m8o_H Immunoglobulin A1 heavy 99.4 1.7E-12 6E-17 147.5 15.8 161 1705-1872 8-213 (221)
467 3n9g_H FAB fragment of MAB CR4 99.4 2.7E-12 9.1E-17 146.6 17.3 175 98-275 8-225 (230)
468 3d85_D IL-12B, interleukin-12 99.4 3.9E-12 1.3E-16 149.8 18.8 246 588-991 18-302 (306)
469 1iam_A ICAM-1, CD54, intercell 99.4 3.8E-12 1.3E-16 134.1 16.6 156 95-263 4-166 (185)
470 2eo9_A Roundabout homolog 1; b 99.4 6.6E-13 2.3E-17 132.5 10.4 98 2085-2185 6-104 (118)
471 1he7_A High affinity nerve gro 99.4 1.4E-12 4.8E-17 126.5 12.1 88 2099-2186 12-106 (126)
472 2aty_A Complement receptor chi 99.4 8E-13 2.7E-17 163.0 13.1 169 94-262 171-360 (376)
473 2lvc_A Obscurin-like protein 1 99.4 7.6E-13 2.6E-17 122.5 9.7 87 89-180 3-91 (91)
474 3liz_H 4C3 monoclonal antibody 99.4 1.9E-12 6.7E-17 150.2 15.5 172 1704-1881 7-219 (253)
475 1i1c_A IGG2A, IG gamma-2A chai 99.4 2.3E-13 7.7E-18 155.3 7.4 172 1700-1871 19-211 (239)
476 1fhg_A Telokin; immunoglobulin 99.4 2.5E-12 8.5E-17 135.2 14.8 101 2085-2185 39-140 (154)
477 2xqy_G A13-D6.3 monoclonal ant 99.4 1.1E-12 3.7E-17 152.0 13.1 171 1704-1875 13-218 (261)
478 1c5d_H Monoclonal antibody aga 99.4 1.1E-12 3.7E-17 148.1 12.5 171 1704-1876 7-210 (215)
479 3bn9_D E2 FAB heavy chain; ant 99.4 6.4E-13 2.2E-17 153.0 10.7 170 1705-1875 8-223 (257)
480 2yr3_A Myosin light chain kina 99.4 9.7E-13 3.3E-17 126.4 9.8 91 2084-2177 8-98 (99)
481 1wit_A Twitchin 18TH IGSF modu 99.4 9.9E-13 3.4E-17 124.4 9.7 90 90-181 2-93 (93)
482 1u2h_A APEG-1, aortic preferen 99.4 1.8E-12 6.2E-17 124.7 11.7 94 89-182 4-98 (99)
483 1gxe_A Myosin binding protein 99.4 7.5E-13 2.6E-17 133.7 9.3 85 2094-2178 25-138 (139)
484 2ckn_A Basic fibroblast growth 99.4 1E-12 3.4E-17 124.8 9.6 89 2084-2177 6-94 (95)
485 2wbj_D OB TCR; transmembrane, 99.4 2.8E-12 9.7E-17 151.6 15.8 176 1697-1872 24-246 (279)
486 2dm2_A Palladin; beta-sandwich 99.4 1.2E-12 4.1E-17 128.7 10.4 98 88-185 6-105 (110)
487 2w59_A IGY FCU3-4; immunoglobu 99.4 6.7E-13 2.3E-17 151.3 9.6 174 1697-1871 12-217 (231)
488 1nct_A Titin; cell adhesion, g 99.4 8E-13 2.7E-17 128.1 8.6 94 88-181 12-105 (106)
489 4go6_B HCF C-terminal chain 1; 99.4 1.5E-12 5.1E-17 147.6 12.2 186 929-1134 18-203 (232)
490 2eny_A Obscurin; beta-sandwich 99.4 9.7E-13 3.3E-17 126.7 8.9 96 86-185 4-100 (104)
491 2eny_A Obscurin; beta-sandwich 99.4 9.4E-13 3.2E-17 126.8 8.8 95 2085-2183 6-101 (104)
492 2bk8_A Connectin, M1, titin he 99.4 4.6E-12 1.6E-16 121.1 13.6 91 92-182 3-94 (97)
493 2dav_A SLOW MYBP-C, myosin-bin 99.4 2.8E-12 9.7E-17 124.6 11.9 92 2088-2179 8-111 (126)
494 1l6x_A Immunoglobulin gamma-1 99.4 9.2E-13 3.1E-17 147.7 9.8 162 1709-1870 15-196 (207)
495 2kdg_A Myotilin; immonoglobuli 99.4 2.4E-12 8E-17 124.2 11.4 96 181-276 3-99 (100)
496 1fhg_A Telokin; immunoglobulin 99.4 2.7E-12 9.4E-17 134.9 12.4 104 89-192 40-144 (154)
497 2dm3_A KIAA0992 protein, palla 99.4 1.1E-12 3.7E-17 129.2 8.6 99 2085-2183 7-106 (110)
498 3irg_A Titin; IG-like, titin, 99.4 3.2E-12 1.1E-16 123.4 11.8 94 89-182 4-99 (100)
499 2eo9_A Roundabout homolog 1; b 99.4 1.9E-12 6.4E-17 129.2 10.4 109 88-199 6-117 (118)
500 2edf_A Obscurin; beta-sandwich 99.3 2E-12 6.8E-17 125.3 10.2 94 2085-2183 6-99 (103)
No 1
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=100.00 E-value=2.8e-54 Score=604.62 Aligned_cols=348 Identities=20% Similarity=0.323 Sum_probs=263.8
Q ss_pred CCCceecCCcc-eEEeCCCeEEEEEEEeeecCCceEEEE-CCeeccCCCeEEEEEcCcEEEEEEeeeccCC------CeE
Q psy7042 89 EKPDFIVPLKD-LVVPLGKLLTLQCEATGTPVPKCRWLR-NGREISSGARYRVETAGGVFRLHFNEVTDVD------NGD 160 (2245)
Q Consensus 89 ~~P~~~~~~~~-~~v~~G~~v~L~C~~~g~p~~~i~W~~-~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d------~G~ 160 (2245)
.+|.|+..|.+ +.+..|+.++|.|.+.|.|.|+|.|+| ||..+....+......++ +|.|.+++.+| +|.
T Consensus 37 ~~P~~~~~p~~~~~~~~g~~~~l~C~a~g~p~p~~~W~k~~g~~~~~~~~~~~~~~~g--~l~i~~~~~~~~~~~~d~G~ 114 (816)
T 3dmk_A 37 KGPVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQISSDG--KLVFPPFRAEDYRQEVHAQV 114 (816)
T ss_dssp EEEEEEECCCSEEEEETTTCEEEECEEEEESCCEEEEEETTSCBCCCBTTTBEECSTT--EEEECCCCGGGCCHHHHEEE
T ss_pred CCCcEEeCCCCeEEEECCCCeEEEeeecCCCCCEEEEEeCCCCCccCCCceEEEeeCC--cEEEcCCChHHccccccceE
Confidence 46899987776 578999999999999999999999999 898887544433334445 48999998886 899
Q ss_pred EEEEEEcCcccc-eeEEEEEecCCCeeecCCCceEEcCCCeEEEEEEEecCC---CceEEEeeCceeee-----cCCceE
Q psy7042 161 YTCEAYNSVGFA-HTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQ---PMEVSLTKNGRVVQ-----SDDRFK 231 (2245)
Q Consensus 161 Y~C~a~n~~g~~-~~~~~l~V~~~P~~~~~~~~~~v~~G~~~~l~C~~~g~p---~~~i~W~~~g~~l~-----~~~~~~ 231 (2245)
|+|.|.|..|.. +..+.|.+..++.+...+....+.+|+.+.|.|.+.+.+ .+.+.|+|++..+. ...++.
T Consensus 115 Y~C~a~n~~G~~~S~~~~v~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~r~~ 194 (816)
T 3dmk_A 115 YACLARNQFGSIISRDVHVRAVVAQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAEYDGKYL 194 (816)
T ss_dssp EEEEEEETTEEEEEEEEEEEEECCCCCCCBCCCEEEETTSCEEECCBCCHHHHTTEEEEEEEETTSCEECBSSCBTTTEE
T ss_pred EEEEEecCcceEEccceEEEEEEccccEEEEecceEecCceEEEEECCCccccccEEEEEEEecCceEeccccCCCceEE
Confidence 999999999987 446778887788887778888999999999999976433 27899999887654 244554
Q ss_pred EEEeCCeEEEEEcccCccCc-eeEEEEEEcCCcceE-E---EEEEEEecCCCCCCCCcccceeeccceEEEecCCCCCCC
Q psy7042 232 FTVLDDYIIIFIKEIRKEDA-GDYTVNLSNSSGSVS-G---TFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGG 306 (2245)
Q Consensus 232 ~~~~~~~~~L~i~~~~~~d~-G~Y~C~a~n~~g~~~-~---~~~l~V~~~p~~~~~~~~~~~~~~~s~~~~w~pp~~~~~ 306 (2245)
+...+ .|.|.+++.+|+ |.|+|.|.|..+... . ...|.|..+
T Consensus 195 ~~~~g---~L~I~~v~~~D~~g~Y~C~~~~~~~~~~~~s~~~~~l~v~~~------------------------------ 241 (816)
T 3dmk_A 195 VLPSG---ELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEP------------------------------ 241 (816)
T ss_dssp ECTTS---CEEESSCCGGGSSCEEEEEEEETTTCCEEECSBCEEEEEECC------------------------------
T ss_pred EecCc---eEEEecCChhhccceeEEEEeeeeeeeeeecccccceEEeCC------------------------------
Confidence 43333 699999999998 999999987542211 0 011111110
Q ss_pred ceeEEEEEEEEecCCCceEEeeeccCcceEEEcCCCCCCEEEEEEEEEecCCCCCCCCCCCceecCCCCCCCCCCCCcEE
Q psy7042 307 LKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVV 386 (2245)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~c~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~v 386 (2245)
T Consensus 242 -------------------------------------------------------------------------------- 241 (816)
T 3dmk_A 242 -------------------------------------------------------------------------------- 241 (816)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EeecCCeeEEEecCCCCCCCCCccEEEEEeeecCCCCcEEEeeeecCCceeecCCcccCceEEEEEEeecCCCCCCCCCC
Q psy7042 387 TQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSA 466 (2245)
Q Consensus 387 ~~~~~~~~~l~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~s~~ 466 (2245)
T Consensus 242 -------------------------------------------------------------------------------- 241 (816)
T 3dmk_A 242 -------------------------------------------------------------------------------- 241 (816)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcEEecCCcccCCCceecc--ccccccccccceeeEEEEeccCcCeEEEEeCCeec------CCCccEEEEeeCCeEEE
Q psy7042 467 SNSVQIKDPMAAKAPEIIVP--LRNANAIQNHNAQFQCTITGCPKPTISWLKGSREI------TPSARHHIFAEGDTYTL 538 (2245)
Q Consensus 467 ~~~v~~~~~~~~~~p~~~~~--~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~i------~~~~~~~~~~~~~~~~L 538 (2245)
....+|.+... +....+.+|+.+.|.|.+.|.|.+.+.|+|++... ....+... .+. .|
T Consensus 242 ---------~~~~~P~i~~~~~~~~~~v~~g~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~--~~~--~L 308 (816)
T 3dmk_A 242 ---------ISSAVPKVVSLAKFDMKTYSGSSTMALLCPAQGYPVPVFRWYKFIEGTTRKQAVVLNDRVKQ--VSG--TL 308 (816)
T ss_dssp ---------CSCCCCBCCGGGGEEEEEECTTSCEEECCCCBCSSCCEEEEEEECTTSSCEEECCCSSSEEE--ETT--EE
T ss_pred ---------CCCCCCccccccCccceEEeCCCeEEEEEEeeecCCCeEEEEeCCCCCccCcceecCCceEe--ccc--eE
Confidence 00112333222 13456778999999999999999999999964322 12223221 222 89
Q ss_pred EEecccccCCceEEEEEEeCCCCCCcceeEeEecCCCCCCCCCcccceEeeCCCeEEEEEeeeecCCCeEEEEeCCeEee
Q psy7042 539 IINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIE 618 (2245)
Q Consensus 539 ~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~~~p~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~~~~~~ 618 (2245)
.|.++..+|+|.|+|.|.|..|.....+.|.|..+|.+...+ ....+..|+.++|.|.+.|.|.+.++|+++|..+.
T Consensus 309 ~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~---~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~~~ 385 (816)
T 3dmk_A 309 IIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAKIDP---PTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIG 385 (816)
T ss_dssp EECSCCGGGCEEEEEEEECSSCEEEEEEEEEECEEEEEEEES---SEEECCTTSCEEEEEEEEEECCCEEEEEETTEECS
T ss_pred EECCCCHhHCEEEEEEEEcCCCceEEEEEEEEcCCCceeeCC---CceEecCCCCEEEEEEEeccCCCEEEEEECCEECC
Confidence 999999999999999999999988888888888766544333 23567889999999999999999999999998875
Q ss_pred ccCeEEEEecCCeEEEEEcCCCCCcCEEEEEEEEeCCCC
Q psy7042 619 SGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGM 657 (2245)
Q Consensus 619 ~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~ 657 (2245)
.. ...|.|.+++.+|.|.|+|.|.|..|.
T Consensus 386 ~~----------~~~L~i~~v~~~d~G~Y~C~a~n~~g~ 414 (816)
T 3dmk_A 386 HS----------ESVLRIESVKKEDKGMYQCFVRNDRES 414 (816)
T ss_dssp CC----------SSEEEESSCCGGGCEEEEEEEECSSCE
T ss_pred CC----------CCEEEEcCCCHHHCEEEEEEEECCCCc
Confidence 43 257999999999999999999987663
No 2
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=5.1e-54 Score=570.35 Aligned_cols=531 Identities=19% Similarity=0.325 Sum_probs=430.7
Q ss_pred EEeeecccceEEEEEEeecCCcceEEecce-----------eeeeceEEECCCccCCcEEEEEEEEcCCCCCCCCCcccc
Q psy7042 11 FYYCEIIVDDCYIIERREVGGAIWLKCNDY-----------NVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTP 79 (2245)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~-----------~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~ 79 (2245)
.|.|.+.+.+.+.|.| ++++.. .....+|.|.+++.+|+|.|+|.|.|..|..... ..
T Consensus 24 ~L~C~~~g~p~~~v~W--------~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~---~~ 92 (570)
T 3b43_A 24 TLQCKVDGTPEIRIAW--------YKEHTKLRSAPAYKMQFKNNVASLVINKVDHSDVGEYTCKAENSVGAVASS---AV 92 (570)
T ss_dssp EEEEEEESSSSCEEEE--------ECSSSBCCCCSSEEEECCTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEE---EE
T ss_pred EEEEEEccCCCCEEEE--------EECCEEccCCCCEEEEEECCEEEEEEccCChhhCEEEEEEEEeCCceEEEE---EE
Confidence 4778876665555554 444431 1124789999999999999999999998875432 22
Q ss_pred EEEeeccCCCCCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECCeeccCCCeEEEEEcCcEEEEEEeeeccCCCe
Q psy7042 80 VKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNG 159 (2245)
Q Consensus 80 ~~v~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G 159 (2245)
+ .+.....+|.|...+.++.+.+|+.++|.|.+.|.|+++|.|+|||..+..+.++.........+|.|.+++.+|+|
T Consensus 93 l--~v~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G 170 (570)
T 3b43_A 93 L--VIKERKLPPSFARKLKDVHETLGFPVAFECRINGSEPLQVSWYKDGELLKDDANLQTSFIHNVATLQILQTDQSHVG 170 (570)
T ss_dssp E--EECCCCCCCEESSCCCCEEEETTSCEEEEEEEESSSSCEEEEEETTEECCCCSSEEEEEETTEEEEEESSCCGGGCE
T ss_pred E--EECCCCCCCcccccCCCeEecCCCeEEEEEEEccCCCCEEEEEECCEECcCCCCEEEEEECCEEEEEECcCChHHCE
Confidence 2 22223458899999999999999999999999999999999999999998877777666666678999999999999
Q ss_pred EEEEEEEcCcccceeEEEEEec---CCCeeecCCCceEEcCCCeEEEEEEEecCCCceEEEeeCceeeecCCceEEEEeC
Q psy7042 160 DYTCEAYNSVGFAHTSSRVKIG---TPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLD 236 (2245)
Q Consensus 160 ~Y~C~a~n~~g~~~~~~~l~V~---~~P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~ 236 (2245)
.|+|.|.|..|...+++.|.|. .||.+...|....+.+|+.++|.|.+.|.|++.|+|+|+|..+..+.++.+...+
T Consensus 171 ~Y~C~a~n~~g~~~~~~~l~v~~~~~pp~~~~~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~k~g~~i~~~~~~~~~~~~ 250 (570)
T 3b43_A 171 QYNCSASNPLGTASSSAKLTLSEHEVPPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVE 250 (570)
T ss_dssp EEEEEEEETTEEEEEEEEEEEECCCCCCEEEECCCCBCCBSBSCEEEEEEEESSSCCEEEEEETTEECCTTSSEEEEEET
T ss_pred EEEEEEEeCCcEEEEEEEEEEcCCCCCCccccCCceeEecCCCeEEEEEEEEECCCCEEEEEECCEECcCCCcEEEEEEC
Confidence 9999999999998888888874 4788888888899999999999999999999999999999999888888887777
Q ss_pred CeEEEEEcccCccCceeEEEEEEcCCcceEEEEEEEEecCCCCCCCCcccceeeccceEEEecCCCCCCCceeEEEEEEE
Q psy7042 237 DYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVER 316 (2245)
Q Consensus 237 ~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~s~~~~w~pp~~~~~~~~~~~~~~~ 316 (2245)
+...|.|.++..+|+|.|+|.|.|..|..+.++.|.|..+|...... +
T Consensus 251 ~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~~~----------------~---------------- 298 (570)
T 3b43_A 251 NTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQEPPRFIKKL----------------E---------------- 298 (570)
T ss_dssp TEEEEEESSBCGGGCEEEEEEEEETTEEEEEEEEECCBCCCEEEECC----------------C----------------
T ss_pred CEEEEEEcccCcccCEEEEEEEECCCCcEEEEEEEEeecCCcccccC----------------C----------------
Confidence 77899999999999999999999999999999999988765311000 0
Q ss_pred EecCCCceEEeeeccCcceEEEcCCCCCCEEEEEEEEEecCCCCCCCCCCCceecCCCCCCCCCCCCcEEEeecCCeeEE
Q psy7042 317 RDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNL 396 (2245)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~c~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~v~~~~~~~~~l 396 (2245)
.. ..+..|+...+.|.+. +.+.+.+
T Consensus 299 ---------------~~-----~~v~~g~~~~l~C~~~-----------------------------------g~P~p~v 323 (570)
T 3b43_A 299 ---------------PS-----RIVKQDEHTRYECKIG-----------------------------------GSPEIKV 323 (570)
T ss_dssp ---------------SB-----CCEESSCEEEEEEEEE-----------------------------------SSSSCEE
T ss_pred ---------------Cc-----cEEcCCCcEEEEEEEe-----------------------------------eCCCCEE
Confidence 00 0123567778888873 2334578
Q ss_pred EecCCCCCCCCCccEEEEEeeecCCCCcEEEeeeecCCceeecCCcccCceEEEEEEeecCCCCCCCCCCCCcEEecCCc
Q psy7042 397 SWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPM 476 (2245)
Q Consensus 397 ~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~s~~~~~v~~~~~~ 476 (2245)
.|.++...-.. ...+.+. .......|.|.++..+|.|.|+|.|.|..|... .+..+.+
T Consensus 324 ~W~k~~~~l~~-~~~~~~~--------------~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~---~~~~l~V---- 381 (570)
T 3b43_A 324 LWYKDETEIQE-SSKFRMS--------------FVESVAVLEMYNLSVEDSGDYTCEAHNAAGSAS---SSTSLKV---- 381 (570)
T ss_dssp EEEETTEECCC-SSSEEEE--------------EETTEEEEEEESCCGGGCEEEEEEEEBTTBCCE---EEEEECE----
T ss_pred EEeECCEECCC-CCcEEEE--------------EECCEEEEEECCCCcccCEEEEEEEEeCCCEEE---EEEEEEe----
Confidence 99875321110 0011111 112235699999999999999999999999643 2223333
Q ss_pred ccCCCceeccccccccccccceeeEEEEeccCcCeEEEEeCCeecCCCccEEEEeeCCeEEEEEecccccCCceEEEEEE
Q psy7042 477 AAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAV 556 (2245)
Q Consensus 477 ~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 556 (2245)
..+|.|...+.+..+.+|+++.|.|.+.|.|.+.+.|+|++..+..+.++.+..++....|.|.++..+|+|.|+|.|.
T Consensus 382 -~~~P~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~ 460 (570)
T 3b43_A 382 -KEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKAS 460 (570)
T ss_dssp -ECCCEECSCCCCEEECTTCCEEEEEEEESSSSCCCEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEE
T ss_pred -cCCCeeecCCCceeecCCCEEEEEEEEecCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhhCEEEEEEEE
Confidence 3678888888888899999999999999999999999999999998889988888877899999999999999999999
Q ss_pred eCCCCCCcceeEeEecCCCCCCCCCcccceEeeCCCeEEEEEeeeecCCCeEEEEeCCeEe-eccCeEEEEecCCeEEEE
Q psy7042 557 NKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVI-ESGGHFHVETSERHAILT 635 (2245)
Q Consensus 557 n~~g~~~~~~~l~v~~~p~~~~~p~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~~~~~-~~~~~~~~~~~~~~~~l~ 635 (2245)
|..|.....+.|.|..+|.+...+. ...+..|+.+.|.|.+.|.|++.|+|++++..+ ..+.++.+...+...+|.
T Consensus 461 N~~G~~~~~~~l~v~~~P~~~~~~~---~~~~~~g~~~~l~c~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~ 537 (570)
T 3b43_A 461 NDVGSDTCVGSITLKAPPRFVKKLS---DISTVVGEEVQLQATIEGAEPISVAWFKDKGEIVRESDNIWISYSENIATLQ 537 (570)
T ss_dssp CSSCEEEEEEEEEECCCCEEEECCC---CBCCBTTCCEEEEEEEESCSSCCCEEEETTEECCCCTTTEEECCCSSEEEEE
T ss_pred ECCCeEEEEEEEEeccCCcccccCC---CceecCCCeEEEEEEEecCCCCEEEEEeCCeEeccCCCeEEEEECCCEEEEE
Confidence 9999999999999999888765443 345778999999999999999999999998654 455677776667778999
Q ss_pred EcCCCCCcCEEEEEEEEeCCCCceeEEEEEee
Q psy7042 636 IRDASNVDTAPYRVVAENDLGMDSAIVKIQIS 667 (2245)
Q Consensus 636 i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~ 667 (2245)
|.+++..|+|.|+|.|.|.+|..+..+.|.|.
T Consensus 538 i~~~~~~d~G~Y~C~a~N~~G~~~~~a~L~V~ 569 (570)
T 3b43_A 538 FSRAEPANAGKYTCQIKNEAGTQECFATLSVL 569 (570)
T ss_dssp ESSCCTTCCEEEEEEEECSSCEEEEEEEECCB
T ss_pred ECcCCHHHCEEEEEEEEECCcEEEEEEEEEEe
Confidence 99999999999999999999999999999875
No 3
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=9.1e-52 Score=548.71 Aligned_cols=542 Identities=22% Similarity=0.406 Sum_probs=431.9
Q ss_pred CCCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECCeeccCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEEcC
Q psy7042 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNS 168 (2245)
Q Consensus 89 ~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 168 (2245)
.||.|+.+++++.+.+|+.++|.|.+.|.|.+.|.|+|||..+..+.++.+...++..+|.|.+++.+|+|.|+|.|.|.
T Consensus 4 ~pP~f~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 83 (570)
T 3b43_A 4 EPPYFIEPLEHVEAAIGEPITLQCKVDGTPEIRIAWYKEHTKLRSAPAYKMQFKNNVASLVINKVDHSDVGEYTCKAENS 83 (570)
T ss_dssp CCCEEEECCCCEEECTTSCEEEEEEEESSSSCEEEEECSSSBCCCCSSEEEECCTTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCcceEECCceEEcCCCEEEEEEEEccCCCCEEEEEECCEEccCCCCEEEEEECCEEEEEEccCChhhCEEEEEEEEeC
Confidence 68999999999999999999999999999999999999999999888888887777788999999999999999999999
Q ss_pred cccceeEEEEEecC---CCeeecCCCceEEcCCCeEEEEEEEecCCCceEEEeeCceeeecCCceEEEEeCCeEEEEEcc
Q psy7042 169 VGFAHTSSRVKIGT---PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKE 245 (2245)
Q Consensus 169 ~g~~~~~~~l~V~~---~P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~ 245 (2245)
.|...+++.|.|.. +|.+...+.+..+.+|+.+.|.|.+.|.|++.|+|||||..+....++.........+|.|.+
T Consensus 84 ~g~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~ 163 (570)
T 3b43_A 84 VGAVASSAVLVIKERKLPPSFARKLKDVHETLGFPVAFECRINGSEPLQVSWYKDGELLKDDANLQTSFIHNVATLQILQ 163 (570)
T ss_dssp TEEEEEEEEEEECCCCCCCEESSCCCCEEEETTSCEEEEEEEESSSSCEEEEEETTEECCCCSSEEEEEETTEEEEEESS
T ss_pred CceEEEEEEEEECCCCCCCcccccCCCeEecCCCeEEEEEEEccCCCCEEEEEECCEECcCCCCEEEEEECCEEEEEECc
Confidence 99988888888864 678888888899999999999999999999999999999999877776666666778999999
Q ss_pred cCccCceeEEEEEEcCCcceEEEEEEEEecCCCCCCCCcccceeeccceEEEecCCCCCCCceeEEEEEEEEecCCCceE
Q psy7042 246 IRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWI 325 (2245)
Q Consensus 246 ~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~s~~~~w~pp~~~~~~~~~~~~~~~~~~~~~~~~ 325 (2245)
+..+|+|.|+|.|.|..|....++.|.|.....+|.... .| .
T Consensus 164 ~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~pp~~~~--------------~p------------------~------ 205 (570)
T 3b43_A 164 TDQSHVGQYNCSASNPLGTASSSAKLTLSEHEVPPFFDL--------------KP------------------V------ 205 (570)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEECCCCCCEEEE--------------CC------------------C------
T ss_pred CChHHCEEEEEEEEeCCcEEEEEEEEEEcCCCCCCcccc--------------CC------------------c------
Confidence 999999999999999999999999999876543331100 00 0
Q ss_pred EeeeccCcceEEEcCCCCCCEEEEEEEEEecCCCCCCCCCCCceecCCCCCCCCCCCCcEEEeecCCeeEEEecCCCCCC
Q psy7042 326 CISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDG 405 (2245)
Q Consensus 326 ~~~~~~~~~~~~i~~l~~~~~~~~~c~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~v~~~~~~~~~l~W~~~~~~~ 405 (2245)
-..+..|+...+.|.+. +.+.+.++|.++...-
T Consensus 206 ------------~~~v~~G~~~~l~C~~~-----------------------------------g~p~p~i~W~k~g~~i 238 (570)
T 3b43_A 206 ------------SVDLALGESGTFKCHVT-----------------------------------GTAPIKITWAKDNREI 238 (570)
T ss_dssp ------------CBCCBSBSCEEEEEEEE-----------------------------------SSSCCEEEEEETTEEC
T ss_pred ------------eeEecCCCeEEEEEEEE-----------------------------------ECCCCEEEEEECCEEC
Confidence 01245678888889873 2234578998753211
Q ss_pred CCCccEEEEEeeecCCCCcEEEeeeecCCceeecCCcccCceEEEEEEeecCCCCCCCCCCCCcEEecCCcccCCCceec
Q psy7042 406 GSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIV 485 (2245)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~s~~~~~v~~~~~~~~~~p~~~~ 485 (2245)
.. -..+.+. .......|.|.++..+|+|.|+|.|.|..|... .+..+. +..+|.+..
T Consensus 239 ~~-~~~~~~~--------------~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~---~~~~l~-----V~~~p~~~~ 295 (570)
T 3b43_A 239 RP-GGNYKMT--------------LVENTATLTVLKVTKGDAGQYTCYASNVAGKDS---CSAQLG-----VQEPPRFIK 295 (570)
T ss_dssp CT-TSSEEEE--------------EETTEEEEEESSBCGGGCEEEEEEEEETTEEEE---EEEEEC-----CBCCCEEEE
T ss_pred cC-CCcEEEE--------------EECCEEEEEEcccCcccCEEEEEEEECCCCcEE---EEEEEE-----eecCCcccc
Confidence 00 0011111 112235799999999999999999999988642 222222 336777776
Q ss_pred ccc-ccccccccceeeEEEEeccCcCeEEEEeCCeecCCCccEEEEeeCCeEEEEEecccccCCceEEEEEEeCCCCCCc
Q psy7042 486 PLR-NANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKST 564 (2245)
Q Consensus 486 ~~~-~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~ 564 (2245)
.+. ...+.+|+.+.|.|.+.|.|.+.+.|+|++..+..+.++.+...+....|.|.++..+|+|.|+|.|.|..|....
T Consensus 296 ~~~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~ 375 (570)
T 3b43_A 296 KLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASS 375 (570)
T ss_dssp CCCSBCCEESSCEEEEEEEEESSSSCEEEEEETTEECCCSSSEEEEEETTEEEEEEESCCGGGCEEEEEEEEBTTBCCEE
T ss_pred cCCCccEEcCCCcEEEEEEEeeCCCCEEEEeECCEECCCCCcEEEEEECCEEEEEECCCCcccCEEEEEEEEeCCCEEEE
Confidence 554 3457899999999999999999999999999999888888877777779999999999999999999999999999
Q ss_pred ceeEeEecCCCCCCCCCcccceEeeCCCeEEEEEeeeecCCCeEEEEeCCeEeeccCeEEEEecCCeEEEEEcCCCCCcC
Q psy7042 565 KAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDT 644 (2245)
Q Consensus 565 ~~~l~v~~~p~~~~~p~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 644 (2245)
++.|.|..+|.+...|. ...+.+|+.+.|.|.+.|.|.|.|+|+|++..+..+.++.+...+....|.|.++...|.
T Consensus 376 ~~~l~V~~~P~~~~~~~---~~~~~~G~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~ 452 (570)
T 3b43_A 376 STSLKVKEPPVFRKKPH---PVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADI 452 (570)
T ss_dssp EEEECEECCCEECSCCC---CEEECTTCCEEEEEEEESSSSCCCEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGC
T ss_pred EEEEEecCCCeeecCCC---ceeecCCCEEEEEEEEecCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhhC
Confidence 99999999998766553 355778999999999999999999999999999888888887777778999999999999
Q ss_pred EEEEEEEEeCCCCceeEEEEEeeCCCCCCCCCe-eeeecCCcEEEEeeCCCCCCCcccccEEEEeeeCCCCCeEEEc---
Q psy7042 645 APYRVVAENDLGMDSAIVKIQISDRPDPPQFPT-VEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVG--- 720 (2245)
Q Consensus 645 g~y~C~a~n~~g~~~~~~~l~v~~~P~~p~~~~-~~~~~~~si~lsW~~p~~~~~~~~~~y~v~~~~~~~~~w~~~~--- 720 (2245)
|.|+|.|.|..|.....+.|.|..+|.....+. ........+.|.+. +...+.+...|.+.+
T Consensus 453 G~Y~C~A~N~~G~~~~~~~l~v~~~P~~~~~~~~~~~~~g~~~~l~c~--------------~~g~p~~~v~W~k~~~~~ 518 (570)
T 3b43_A 453 GEYQCKASNDVGSDTCVGSITLKAPPRFVKKLSDISTVVGEEVQLQAT--------------IEGAEPISVAWFKDKGEI 518 (570)
T ss_dssp EEEEEEEECSSCEEEEEEEEEECCCCEEEECCCCBCCBTTCCEEEEEE--------------EESCSSCCCEEEETTEEC
T ss_pred EEEEEEEEECCCeEEEEEEEEeccCCcccccCCCceecCCCeEEEEEE--------------EecCCCCEEEEEeCCeEe
Confidence 999999999999999999999987774211111 11122334444444 222223333343321
Q ss_pred -----------eeeeeeEEEecCCCCCEEEEEEEEEecccCCCCCC
Q psy7042 721 -----------NTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPST 755 (2245)
Q Consensus 721 -----------~~~~~~~~i~~L~p~t~y~~~v~a~n~~G~~~~s~ 755 (2245)
......+.|.++++.+...|.|.|.|..|....+.
T Consensus 519 ~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~a 564 (570)
T 3b43_A 519 VRESDNIWISYSENIATLQFSRAEPANAGKYTCQIKNEAGTQECFA 564 (570)
T ss_dssp CCCTTTEEECCCSSEEEEEESSCCTTCCEEEEEEEECSSCEEEEEE
T ss_pred ccCCCeEEEEECCCEEEEEECcCCHHHCEEEEEEEEECCcEEEEEE
Confidence 12235788999999999999999999999754443
No 4
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=100.00 E-value=2e-49 Score=555.42 Aligned_cols=733 Identities=18% Similarity=0.227 Sum_probs=484.7
Q ss_pred eeEEEEcCCeEEEEEEeeecCCCcceEEe-CCeecCCCCcEEEEEccceEEEEecCccccc------cceeEEEEEEcCC
Q psy7042 1144 RDMTVLAGEEFTITVPFSGRPKPTPIWTV-NGDEVSPDGRIKFETSENQTIYRNKSAKRAT------DSGSYTIQLVNTV 1216 (2245)
Q Consensus 1144 ~~~~v~~~~~~~l~~~~~~~p~~~v~W~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~Y~~~a~n~~ 1216 (2245)
..+.+..|+.+.|.|.+.|.|.+.+.|++ +|..+....+......+ ..|.+..+.. . |.|.|+|.|.|..
T Consensus 47 ~~~~~~~g~~~~l~C~a~g~p~p~~~W~k~~g~~~~~~~~~~~~~~~--g~l~i~~~~~-~~~~~~~d~G~Y~C~a~n~~ 123 (816)
T 3dmk_A 47 NRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQISSD--GKLVFPPFRA-EDYRQEVHAQVYACLARNQF 123 (816)
T ss_dssp SEEEEETTTCEEEECEEEEESCCEEEEEETTSCBCCCBTTTBEECST--TEEEECCCCG-GGCCHHHHEEEEEEEEEETT
T ss_pred CeEEEECCCCeEEEeeecCCCCCEEEEEeCCCCCccCCCceEEEeeC--CcEEEcCCCh-HHccccccceEEEEEEecCc
Confidence 44678889999999999999999999999 88888654443333222 3455555432 3 3899999999999
Q ss_pred cce-eEEEEEEEECCCCCCCCCceeeeccCCcEEEEecCCCCCCCcceeeeEEEEeeccccceEEc------ccceecce
Q psy7042 1217 GSD-SASCKVYVVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKL------SSFVRSPA 1289 (2245)
Q Consensus 1217 g~~-~~s~~~~v~~~p~~p~~~~~~~~~~~~s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~~~~~~------~~~~~~~~ 1289 (2245)
|.. +....+.+...+........+....+..+.|.|..|..... +...+.| ........... .......+
T Consensus 124 G~~~S~~~~v~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~-~~~~v~W--~~~~~~~~~~~~~~~~r~~~~~~g~ 200 (816)
T 3dmk_A 124 GSIISRDVHVRAVVAQYYEADVNKEHVIRGNSAVIKCLIPSFVAD-FVEVVSW--HTDEEENYFPGAEYDGKYLVLPSGE 200 (816)
T ss_dssp EEEEEEEEEEEEECCCCCCCBCCCEEEETTSCEEECCBCCHHHHT-TEEEEEE--EETTSCEECBSSCBTTTEEECTTSC
T ss_pred ceEEccceEEEEEEccccEEEEecceEecCceEEEEECCCccccc-cEEEEEE--EecCceEeccccCCCceEEEecCce
Confidence 975 44445554444333222233445568889999986532100 1122333 22111000000 00000112
Q ss_pred EEecCCCCCceEEEEEEEeccccCCCCcccCCcccccCCCCCCCCCCCCeeeeccCCcEEEEeeCCCCCCCccceeeEEE
Q psy7042 1290 YDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKML 1369 (2245)
Q Consensus 1290 ~~l~~L~~~t~Y~~~v~A~n~~G~~~~s~~~~~~~~~~~~~~p~~p~~~~~~~~~~~s~~l~W~~p~~~~g~~i~~y~i~ 1369 (2245)
+.|.+
T Consensus 201 L~I~~--------------------------------------------------------------------------- 205 (816)
T 3dmk_A 201 LHIRE--------------------------------------------------------------------------- 205 (816)
T ss_dssp EEESS---------------------------------------------------------------------------
T ss_pred EEEec---------------------------------------------------------------------------
Confidence 33333
Q ss_pred EecCCCCCCcceeeeeccCc-ceeEeeeccccCCCCCCCCCCCCeEeeeC--CCCCcccCC-cceeeEEecCCeEEEEee
Q psy7042 1370 LKTPTGELPTTIWSKIRPTS-STVYCKDTTMNSSNSEPGKQSGPVIVEEQ--PNKPVMDLS-GVRDITVKAGEDFSIHVP 1445 (2245)
Q Consensus 1370 ~~~~~~~~~~~~~~~~~~~~-~~y~c~~~~~~~~~~~~~~~~~~~~v~~~--~~~p~~~~~-~~~~~~v~~g~~~~l~c~ 1445 (2245)
....|. |.|.|.+.+..............+.+... ..+|.+... ....+.+.+|+.+.|.|.
T Consensus 206 --------------v~~~D~~g~Y~C~~~~~~~~~~~~s~~~~~l~v~~~~~~~~P~i~~~~~~~~~~v~~g~~v~L~C~ 271 (816)
T 3dmk_A 206 --------------VGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSAVPKVVSLAKFDMKTYSGSSTMALLCP 271 (816)
T ss_dssp --------------CCGGGSSCEEEEEEEETTTCCEEECSBCEEEEEECCCSCCCCBCCGGGGEEEEEECTTSCEEECCC
T ss_pred --------------CChhhccceeEEEEeeeeeeeeeecccccceEEeCCCCCCCCccccccCccceEEeCCCeEEEEEE
Confidence 334454 66666554322111111111112233221 223444322 235688999999999999
Q ss_pred eecCCCCceeEecCCccccCCCC-cEEEeeecceeEEEEccCCcCCceEEEEEEEcCCcceeeEEEEEEeccCCCCCCCC
Q psy7042 1446 FMAFPQPAAFWFANDSIIDDSDT-RVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLHSRLRTLPDSVNPRC 1524 (2245)
Q Consensus 1446 ~~~~p~~~~~W~~~~~~~~~~~~-~~~~~~~~~~~~L~i~~~~~~d~G~Y~c~a~n~~g~~~~~~~~~v~~~~~~~~~~~ 1524 (2245)
+.|.|.|.+.|+|++........ ............|.|.+++.+|+|.|+|.|.|..|.......+.|..++....
T Consensus 272 ~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~--- 348 (816)
T 3dmk_A 272 AQGYPVPVFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAKI--- 348 (816)
T ss_dssp CBCSSCCEEEEEEECTTSSCEEECCCSSSEEEETTEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECEEEEEEE---
T ss_pred eeecCCCeEEEEeCCCCCccCcceecCCceEeccceEEECCCCHhHCEEEEEEEEcCCCceEEEEEEEEcCCCceee---
Confidence 99999999999996543321100 00001122356999999999999999999999999887777777765332100
Q ss_pred CCCCCCCCCCCCCCCCCCCCcccchhccccccCcccccCCeEEEEecCCCCCCCCccceEEEEEEecCCccceEeecccc
Q psy7042 1525 HLPSSTSKERPKFPTHPNHQPWLKWARASLTSKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHI 1604 (2245)
Q Consensus 1525 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~w~~p~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 1604 (2245)
.| .......++.++|.|.. .+.
T Consensus 349 ---------------~~--------------~~~~v~~G~~v~l~C~~-----------------------------~g~ 370 (816)
T 3dmk_A 349 ---------------DP--------------PTQTVDFGRPAVFTCQY-----------------------------TGN 370 (816)
T ss_dssp ---------------ES--------------SEEECCTTSCEEEEEEE-----------------------------EEE
T ss_pred ---------------CC--------------CceEecCCCCEEEEEEE-----------------------------ecc
Confidence 00 00011223445565542 111
Q ss_pred CCccceEEEEeecCccCCCCCCccceeeEeeeCCeeeEEeccceeeeceEEEeccCCCCeEEEEEEEEcCCCcCCCCCcC
Q psy7042 1605 PDTSLKYVLWVSEGKSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICT 1684 (2245)
Q Consensus 1605 ~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~~ 1684 (2245)
+.+.+.|++||+.+.... ..|.|.+++.+|.|.|+|.|.|..|......
T Consensus 371 ---p~~~v~W~k~g~~~~~~~--------------------------~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~-- 419 (816)
T 3dmk_A 371 ---PIKTVSWMKDGKAIGHSE--------------------------SVLRIESVKKEDKGMYQCFVRNDRESAEASA-- 419 (816)
T ss_dssp ---CCCEEEEEETTEECSCCS--------------------------SEEEESSCCGGGCEEEEEEEECSSCEEEECC--
T ss_pred ---CCCEEEEEECCEECCCCC--------------------------CEEEEcCCCHHHCEEEEEEEECCCCcEEEEE--
Confidence 123589999999985322 3799999999999999999999887544222
Q ss_pred cceEEeeecCCCCCceeccCCceEEcCCCeEEEEEEecCcCCCeEEEeeCCEeccCCceEEEEe-----cCcEEEEEEee
Q psy7042 1685 TPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVET-----AGGVFRLHFNE 1759 (2245)
Q Consensus 1685 ~~v~~~~~~~~~~p~~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~~~~l~~~~~~~~~~-----~~~~~~L~i~~ 1759 (2245)
.+.......+|.+...+....+.+|+++.|.|.+.|.|.+.++|+++|..+....++.... ......|.|.+
T Consensus 420 ---~l~v~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~L~i~~ 496 (816)
T 3dmk_A 420 ---ELKLGGRFDPPVIRQAFQEETMEPGPSVFLKCVAGGNPTPEISWELDGKKIANNDRYQVGQYVTVNGDVVSYLNITS 496 (816)
T ss_dssp ---EEECCCSSCCCEEEEECCCEEECSSSCEEEEEEEECSSCCEEEEEETTEECCSCTTEEEEEEECTTSCEEEEEEESS
T ss_pred ---EEEEccccCCCceEecCcceEEcCCCCEEEEEEEecCCCCEEEEEECCEECCCCCCcccccEEecCCCcEEEEEEee
Confidence 2222223467888877788899999999999999999999999999999998777665432 23345799999
Q ss_pred eccCCCeEEEEEEecCceeeEEEEEEEecCCCccccCCCceEEcCCCeEEEEEEEeccCCcEEEEEECCEEeecCCceEE
Q psy7042 1760 VTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKF 1839 (2245)
Q Consensus 1760 v~~~d~G~Y~C~~~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~v~W~~~g~~l~~~~~~~~ 1839 (2245)
++.+|+|.|+|.|.|..|....++.|.|..+|.+.. +....+.+|+++.|.|.+.+.|.+.+.|+|+|..+....+..+
T Consensus 497 v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~-~~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~~~~l~~~~~~~~ 575 (816)
T 3dmk_A 497 VHANDGGLYKCIAKSKVGVAEHSAKLNVYGLPYIRQ-MEKKAIVAGETLIVTCPVAGYPIDSIVWERDNRALPINRKQKV 575 (816)
T ss_dssp CCTTTCEEEEEEEEETTEEEEEEEEEEECSSCEECC-CCCEEEETTCCEEEECCEECSSEEEEEEEETTEESCCSTTEEE
T ss_pred ccccCCEEEEEEEEECCCeEEEEEEEEEecCCeeEc-cCCeEEecCCeEEEEEEecCCCCCEEEEEECCeEcccCCceEE
Confidence 999999999999999999999999999999987654 4456788999999999999999999999999999876665443
Q ss_pred EEcCCeEEEEEcccC-cccceEEEEEEEcCCee-eEEEEEEEEeCCCCCCCCCceecccccceEEEEecCCCCCCCeeee
Q psy7042 1840 TVLDDYIIIFIKEIR-KEDAGDYTVNLSNSSGS-VSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVT 1917 (2245)
Q Consensus 1840 ~~~~~~~~l~i~~~~-~~d~G~Y~C~a~n~~g~-~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~ 1917 (2245)
. ....|.|.++. .+|+|.|+|.|.|..|. .+..+.+.|...|.........
T Consensus 576 ~---~~~~l~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~~v~v~~~p~~~~~~~~~------------------------ 628 (816)
T 3dmk_A 576 F---PNGTLIIENVERNSDQATYTCVAKNQEGYSARGSLEVQVMVLPRIIPFAFEE------------------------ 628 (816)
T ss_dssp C---TTSEEEESSCCHHHHCEEEEEEEEESSSCEEEEEEEEEEECCCCCBCCCCCS------------------------
T ss_pred e---cCCeEEEEecCccccCEEEEEEEEECCCceeeeeEEEEEecCCccccccccc------------------------
Confidence 2 22369999998 68999999999999984 4556777777655432211000
Q ss_pred EEEEEEEcCCCCceEEEeeecCcceEEecCCCCCCeEEEEEEEECCCCCCCCCCCcCceeccCCCCCCCCCCCcEEEEEc
Q psy7042 1918 HYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVG 1997 (2245)
Q Consensus 1918 ~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~~~a~n~~g~~~~s~~~~~~~~~~~~~~p~~p~~~~~~~~~ 1997 (2245)
..+..|....+.|.+...
T Consensus 629 ----------------------------~~~~~G~~v~L~C~~~~~---------------------------------- 646 (816)
T 3dmk_A 629 ----------------------------GPAQVGQYLTLHCSVPGG---------------------------------- 646 (816)
T ss_dssp ----------------------------SCEESSCEEEEEEBCCCS----------------------------------
T ss_pred ----------------------------cccCCCCeEEEEEEEeCC----------------------------------
Confidence 011234555555543210
Q ss_pred CCeEEEEEeccCCCCCCceeEEEEEEeeecCccceEEEEEEeccceEEeCCCcCCceEEEEEEEEeccccCCCcCCCCcc
Q psy7042 1998 GDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSV 2077 (2245)
Q Consensus 1998 ~~~v~l~W~~p~~~~~~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~s~~v 2077 (2245)
...+.++|.+.. ..+. ................|.|.++...|.|.|+|.|.|..|.. +..+
T Consensus 647 ~~~~~i~W~~~g----~~l~----------~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~-----~~~~ 707 (816)
T 3dmk_A 647 DLPLNIDWTLDG----QAIS----------EDLGITTSRVGRRGSVLTIEAVEASHAGNFTCHARNLAGHQ-----QFTT 707 (816)
T ss_dssp SSCCEEEEEETT----BCCC----------GGGTCEEEEETTTEEEEEEESCCGGGCEEEEEEEECSSCEE-----EEEE
T ss_pred CCCCEEEEEECC----eEcC----------CCCCeeEEEcCCCeeEEEEccCChhhCEEEEEEEEeCCccE-----EEEE
Confidence 001347787631 1110 00001111111233579999999999999999999998854 2233
Q ss_pred cccCcccCCCceEEeeccceeeecCccEEEEEEEEeeCCCeEEEeeCCEeeCC-------CCcEEEEEeCcEEEEEEcCC
Q psy7042 2078 QIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITP-------SARHHIFAEGDTYTLIINSV 2150 (2245)
Q Consensus 2078 ~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~-------~~~~~~~~~~~~~~L~i~~v 2150 (2245)
.+. ...+|.+...+.+..+.+|+.++|.|.+.|.|.|.|+|+|++..+.. ..++. ..++ .|.|.++
T Consensus 708 ~l~---V~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~-~~~~---~L~i~~v 780 (816)
T 3dmk_A 708 PLN---VYVPPRWILEPTDKAFAQGSDAKVECKADGFPKPQVTWKKAVGDTPGEYKDLKKSDNIR-VEEG---TLHVDNI 780 (816)
T ss_dssp EEC---EEEEEEEEECCCCEEEETTCCEEEECEEEEESCCEEECCEECSSSTTCCBCCCCBTTEE-EETT---EEEECSC
T ss_pred EEE---EEeCCceeeecccceecCCCcEEEEEEEecCCCCeEEEEecCCCCCccccccccCCCEE-ecCC---EEEECcC
Confidence 333 23468898888888999999999999999999999999998765432 22222 2334 7999999
Q ss_pred CCCCCeEEEEEEEeCCceeeEEEEEEEEcCCC
Q psy7042 2151 YGVDADEYVCRAVNKGGVKSTKAELIIMTAPK 2182 (2245)
Q Consensus 2151 ~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~p~ 2182 (2245)
..+|+|.|+|.|.|.+|.+..++.+..+..++
T Consensus 781 ~~~d~G~Y~C~a~N~~G~~~~~v~~~~~~~~~ 812 (816)
T 3dmk_A 781 QKTNEGYYLCEAINGIGSGLSAVIMISVQAHH 812 (816)
T ss_dssp CGGGCEEEEEEEECSSSSCEEEEEEEEEEC--
T ss_pred ChhhCeEEEEEEEeCCCCCcEEEEEEEeeccc
Confidence 99999999999999999999998887765543
No 5
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=100.00 E-value=9.6e-47 Score=512.30 Aligned_cols=563 Identities=17% Similarity=0.221 Sum_probs=405.6
Q ss_pred eeceEEECCCccCCcEEEEEEEEcCCCCCCCCCccccEEEeeccCCCCCceecCCcceEEeCCCeEEEEEEEeeecCCce
Q psy7042 43 LECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKC 122 (2245)
Q Consensus 43 ~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~~~v~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i 122 (2245)
.+++|.|.+++.+|+|.|+|.+.|...... ...+.+.+.....+|.|...+ ...+.+|+.++|.|.+.+ |.+.|
T Consensus 69 ~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~----~~~~~l~V~~~~~~p~i~~~~-~~~v~~g~~v~l~C~~~~-p~~~v 142 (642)
T 1e07_A 69 PNASLLIQNIIQNDTGFYTLHVIKSDLVNE----EATGQFRVYPELPKPSISSNN-SKPVEDKDAVAFTCEPET-QDATY 142 (642)
T ss_pred cCCcEEECCCCcccCcEEEEEEEcCCCeEE----EEEEEEEecccCCCCcEEccC-ceeEecCCcEEEEEECCC-CCeeE
Confidence 356899999999999999999997542221 122334444444577776643 457889999999999998 88999
Q ss_pred EEEECCeeccCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEEcCcccce-eEEEEEecCCC-eeecCCCceEEcCCCe
Q psy7042 123 RWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAH-TSSRVKIGTPP-RIDRMPNALYIPEGDN 200 (2245)
Q Consensus 123 ~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~-~~~~l~V~~~P-~~~~~~~~~~v~~G~~ 200 (2245)
.|+|+|..+..+.++.+...++ .|.|.+++.+|+|.|+|.|.|..|... ..+.|.|..+| .+...|....+.+|+.
T Consensus 143 ~W~~~g~~l~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~G~~ 220 (642)
T 1e07_A 143 LWWVNNQSLPVSPRLQLSNGNR--TLTLFNVTRNDTASYKCETQNPVSARRSDSVILNVLYGPDAPTISPLNTSYRSGEN 220 (642)
T ss_pred EEEECCeECCCCCceEEcCCCC--EEEEeCCCcccCeeEEEEEecCCCCcccceEEEEEEeCCCCcEEecCCcccccCCE
Confidence 9999999999888888766554 699999999999999999999988654 46889998655 3455677788999999
Q ss_pred EEEEEEEecCCCceEEEeeCceeeecCCceEEEEeCCeEEEEEcccCccCceeEEEEEEcCCcceE--EEEEEEEecCCC
Q psy7042 201 TKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVS--GTFTINITGLPG 278 (2245)
Q Consensus 201 ~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~--~~~~l~V~~~p~ 278 (2245)
++|.|.+.|.|.+.|+|+|+|..+... ..|.|.++..+|+|.|+|.|.|..|... ..+.|.|..++.
T Consensus 221 ~~l~C~~~g~p~~~i~W~~~g~~i~~~-----------~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~~ 289 (642)
T 1e07_A 221 LNLSCHAASNPPAQYSWFVNGTFQQST-----------QELFIPNITVNNSGSYTCQAHNSDTGLNRTTVTTITVYAEPP 289 (642)
T ss_pred EEEEEEcCCCCCcEEEEEECCeEcccC-----------CceEEecccccCCeEEEEEEEeCCCceEEeeeEEEEEEccCC
Confidence 999999999999999999999987432 2599999999999999999999988654 456677776554
Q ss_pred CCCCCc-ccceee-ccceEEEecCCCCCCCceeEEEEEEEEecCCCceEEeeeccCcceEEEcCCCCCCEEEEEEEEEec
Q psy7042 279 PPIGPL-DVSEIT-KHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNE 356 (2245)
Q Consensus 279 ~~~~~~-~~~~~~-~~s~~~~w~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~c~a~n~ 356 (2245)
.|.... ....+. +.++.+.|.... .+ ..+.|.+...................|.|.++...+.+.|+|.|.|.
T Consensus 290 ~p~i~~~~~~~~~~g~~v~l~C~~~~----~p-~~v~W~~~g~~l~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 364 (642)
T 1e07_A 290 KPFITSNNSNPVEDEDAVALTCEPEI----QN-TTYLWWVNNQSLPVSPRLQLSNDNRTLTLLSVTRNDVGPYECGIQNE 364 (642)
T ss_pred CCEEEcCCceeEecCCcEEEEEECCC----CC-ccEEEEECCccCCCcCCEEEeCCCCEEEEeccCcccCeeEEEEEeCC
Confidence 443221 112222 445777776422 11 13334333322211111222234568999999999999999999999
Q ss_pred CCCCCCCCCCCceecCCCCCCCCCCCCcEEEeecCCeeEEEecCCCCCCCCCccEEEEEeeecCCCCcEEEeeeecCCce
Q psy7042 357 NGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQ 436 (2245)
Q Consensus 357 ~g~~~~~~~~~~~~~~~~~~~p~~~~~~~v~~~~~~~~~l~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (2245)
.|..... ...+.....|......+. ......+..+.|.|... +.+.....|+..+. .......
T Consensus 365 ~g~~~s~-~~~l~V~~~p~~~~~~~~--~~~~~~g~~~~l~C~~~---g~p~~~i~W~~~g~-----------~~~~~~~ 427 (642)
T 1e07_A 365 LSVDHSD-PVILNVLYGPDDPTISPS--YTYYRPGVNLSLSCHAA---SNPPAQYSWLIDGN-----------IQQHTQE 427 (642)
T ss_pred CCCccee-eEEEEEEcCCCCCeecCC--ceEecCCCcEEEEEEcC---ccCCCeEEEEECCE-----------EcCCCce
Confidence 8754221 111111111111101111 12234556666766542 22222222322111 1123457
Q ss_pred eecCCcccCceEEEEEEeecCCCCCCCCCCCCcEEecCCcccCCCceeccccccccccccceeeEEEEeccCcCeEEEEe
Q psy7042 437 INIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLK 516 (2245)
Q Consensus 437 l~i~~l~~~~~g~y~c~a~n~~g~~~~s~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~ 516 (2245)
|.|.++...|.|.|+|.|.|..|....+ ..+.+.+.. ...+|.+.. ..+..+.+|+++.|.|.+.+ |.+.+.|+|
T Consensus 428 L~i~~~~~~d~G~Y~C~a~n~~g~~~~s-~~~~v~v~~--~~~~p~i~~-~~~~~v~~g~~v~l~C~~~~-~~~~i~W~~ 502 (642)
T 1e07_A 428 LFISNITEKNSGLYTCQANNSASGHSRT-TVKTITVSA--ELPKPSISS-NNSKPVEDKDAVAFTCEPEA-QNTTYLWWV 502 (642)
T ss_pred EEEccCChhhCeEEEEEEEcCCCCCccc-ceEEEEEec--cCCCceEec-CCceeecCCCeEEEEEECCC-CCcEEEEEE
Confidence 9999999999999999999999865422 233344332 223455543 45567889999999999995 889999999
Q ss_pred CCeecCCCccEEEEeeCCeEEEEEecccccCCceEEEEEEeCCCCCCc-ceeEeEecCCCCC-CCCCcccceEeeCCCeE
Q psy7042 517 GSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKST-KAELIIMTAPKFN-VPPRFRDTAYFDKGENV 594 (2245)
Q Consensus 517 ~~~~i~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~-~~~l~v~~~p~~~-~~p~~~~~~~~~~g~~~ 594 (2245)
+|..+....++.+..++ ..|.|.++..+|+|.|+|.|.|..|...+ .+.|.|..+|... ..+ ....+..|+.+
T Consensus 503 ~g~~l~~~~~~~~~~~~--~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~---~~~~v~~g~~~ 577 (642)
T 1e07_A 503 NGQSLPVSPRLQLSNGN--RTLTLFNVTRNDARAYVCGIQNSVSANRSDPVTLDVLYGPDTPIISP---PDSSYLSGANL 577 (642)
T ss_pred CCEeCCCCCcEEEcCCC--cEEEEeecChhcCceEEEEeEcCCCCccCCCEEEEEEeCCCcceecC---CceeEEcCCcE
Confidence 99999888877766544 38999999999999999999999998654 6899998776533 222 33568889999
Q ss_pred EEEEeeeecCCCeEEEEeCCeEeeccCeEEEEecCCeEEEEEcCCCCCcCEEEEEEEEeCCCCceeEEEEEee
Q psy7042 595 VVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQIS 667 (2245)
Q Consensus 595 ~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~ 667 (2245)
+|.|.+.|.|++.++|+++|..+..+ ..|.|.++...|.|.|+|.|.|..|..+.++.|.|.
T Consensus 578 ~l~C~~~g~p~p~v~W~~~g~~i~~~-----------~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~s~~l~V~ 639 (642)
T 1e07_A 578 NLSCHSASNPSPQYSWRINGIPQQHT-----------QVLFIAKITPNNNGTYACFVSNLATGRNNSIVKSIT 639 (642)
T ss_pred EEEEEeccCCCCeEEEEECCEECccC-----------ceEEECcccccCCeEEEEEEEecccCcceeEEEEEE
Confidence 99999999999999999999877532 479999999999999999999999999888877764
No 6
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=100.00 E-value=3.2e-44 Score=487.54 Aligned_cols=564 Identities=16% Similarity=0.207 Sum_probs=402.4
Q ss_pred CcceeeeeccCcceeEeeeccccCCCCCCCCCCCCeEeeeCCCCCcccCCcceeeEEecCCeEEEEeeeecCCCCceeEe
Q psy7042 1378 PTTIWSKIRPTSSTVYCKDTTMNSSNSEPGKQSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWF 1457 (2245)
Q Consensus 1378 ~~~~~~~~~~~~~~y~c~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~ 1457 (2245)
.|.|......|+|.|.|.+.+.... ....+..+.|...+.+|.+... ....+.+|+.+.|.|.+.+ |.+.++|+
T Consensus 72 sL~I~~v~~~D~G~Y~C~~~~~~~~---~~~~~~~l~V~~~~~~p~i~~~--~~~~v~~g~~v~l~C~~~~-p~~~v~W~ 145 (642)
T 1e07_A 72 SLLIQNIIQNDTGFYTLHVIKSDLV---NEEATGQFRVYPELPKPSISSN--NSKPVEDKDAVAFTCEPET-QDATYLWW 145 (642)
T ss_pred cEEECCCCcccCcEEEEEEEcCCCe---EEEEEEEEEecccCCCCcEEcc--CceeEecCCcEEEEEECCC-CCeeEEEE
Confidence 4667777788999999988753221 1123344566665566666543 2467889999999999999 89999999
Q ss_pred cCCccccCCCCcEEEeeecceeEEEEccCCcCCceEEEEEEEcCCcce-eeEEEEEEeccCCCCCCCCCCCCCCCCCCCC
Q psy7042 1458 ANDSIIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFD-TATLHSRLRTLPDSVNPRCHLPSSTSKERPK 1536 (2245)
Q Consensus 1458 ~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~c~a~n~~g~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 1536 (2245)
+++..+.... ++.+ ......|.|.+++.+|+|.|+|.|.|..|.. +..+.|.|...|..+..
T Consensus 146 ~~g~~l~~~~-~~~~--~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~p~~~~~-------------- 208 (642)
T 1e07_A 146 VNNQSLPVSP-RLQL--SNGNRTLTLFNVTRNDTASYKCETQNPVSARRSDSVILNVLYGPDAPTI-------------- 208 (642)
T ss_pred ECCeECCCCC-ceEE--cCCCCEEEEeCCCcccCeeEEEEEecCCCCcccceEEEEEEeCCCCcEE--------------
Confidence 9999887543 4443 3456799999999999999999999988764 34567777754432110
Q ss_pred CCCCCCCCcccchhccccccCcccccCCeEEEEecCCCCCCCCccceEEEEEEecCCccceEeeccccCCccceEEEEee
Q psy7042 1537 FPTHPNHQPWLKWARASLTSKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVS 1616 (2245)
Q Consensus 1537 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~w~~p~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~ 1616 (2245)
.|. ......++.++|.|... +. +.+.+.|++
T Consensus 209 ---~~~--------------~~~~~~G~~~~l~C~~~-----------------------------g~---p~~~i~W~~ 239 (642)
T 1e07_A 209 ---SPL--------------NTSYRSGENLNLSCHAA-----------------------------SN---PPAQYSWFV 239 (642)
T ss_pred ---ecC--------------CcccccCCEEEEEEEcC-----------------------------CC---CCcEEEEEE
Confidence 000 00122345667776641 01 123589999
Q ss_pred cCccCCCCCCccceeeEeeeCCeeeEEeccceeeeceEEEeccCCCCeEEEEEEEEcCCCcCCCCCcCcceEEeeecCCC
Q psy7042 1617 EGKSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVKICEFVGGE 1696 (2245)
Q Consensus 1617 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~~~~v~~~~~~~~~ 1696 (2245)
||+.+.. ...|.|.++..+|.|.|+|.|.|..|....+. .+.+.......
T Consensus 240 ~g~~i~~---------------------------~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~---~~~v~v~~~~~ 289 (642)
T 1e07_A 240 NGTFQQS---------------------------TQELFIPNITVNNSGSYTCQAHNSDTGLNRTT---VTTITVYAEPP 289 (642)
T ss_pred CCeEccc---------------------------CCceEEecccccCCeEEEEEEEeCCCceEEee---eEEEEEEccCC
Confidence 9998742 12799999999999999999999987654221 12232222223
Q ss_pred CCceeccCCceEEcCCCeEEEEEEecCcCCCeEEEeeCCEeccCCceEEEEecCcEEEEEEeeeccCCCeEEEEEEecCc
Q psy7042 1697 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSV 1776 (2245)
Q Consensus 1697 ~p~~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~ 1776 (2245)
+|.+.. .....+..|+++.|.|.+.+.| +.+.|+++|..+....++.+...+. .|.|.+++.+|+|.|+|.|.|..
T Consensus 290 ~p~i~~-~~~~~~~~g~~v~l~C~~~~~p-~~v~W~~~g~~l~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~a~n~~ 365 (642)
T 1e07_A 290 KPFITS-NNSNPVEDEDAVALTCEPEIQN-TTYLWWVNNQSLPVSPRLQLSNDNR--TLTLLSVTRNDVGPYECGIQNEL 365 (642)
T ss_pred CCEEEc-CCceeEecCCcEEEEEECCCCC-ccEEEEECCccCCCcCCEEEeCCCC--EEEEeccCcccCeeEEEEEeCCC
Confidence 444433 3345667788999999999876 6899999999988777777655443 59999999999999999999998
Q ss_pred eeeE-EEEEEEecCCCcc-ccCCCceEEcCCCeEEEEEEEeccCCcEEEEEECCEEeecCCceEEEEcCCeEEEEEcccC
Q psy7042 1777 GFAH-TSSRVKIGTPPRI-DRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIR 1854 (2245)
Q Consensus 1777 g~~~-~~~~l~V~~~p~~-~~~~~~~~~~~g~~~~l~C~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~l~i~~~~ 1854 (2245)
|... ..+.|.|..+|.. ...+....+.+|+.+.|.|.+.|.|.+.++|+++|..+... ..|.|.++.
T Consensus 366 g~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~~~~~-----------~~L~i~~~~ 434 (642)
T 1e07_A 366 SVDHSDPVILNVLYGPDDPTISPSYTYYRPGVNLSLSCHAASNPPAQYSWLIDGNIQQHT-----------QELFISNIT 434 (642)
T ss_pred CCcceeeEEEEEEcCCCCCeecCCceEecCCCcEEEEEEcCccCCCeEEEEECCEEcCCC-----------ceEEEccCC
Confidence 8643 4578888876653 44566778899999999999999999999999999877533 359999999
Q ss_pred cccceEEEEEEEcCCeeeEEE--EEEEEeCCCCCCCCCceecccccceEEEEecCCCCCCCeeeeEEEEEEEcCCCCceE
Q psy7042 1855 KEDAGDYTVNLSNSSGSVSGT--FTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWI 1932 (2245)
Q Consensus 1855 ~~d~G~Y~C~a~n~~g~~~~~--~~l~v~~~p~~~~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~ 1932 (2245)
.+|+|.|+|.|.|..|....+ +.+.|...+.+|.. . . +
T Consensus 435 ~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~~~p~i--~--~------------~------------------------ 474 (642)
T 1e07_A 435 EKNSGLYTCQANNSASGHSRTTVKTITVSAELPKPSI--S--S------------N------------------------ 474 (642)
T ss_pred hhhCeEEEEEEEcCCCCCcccceEEEEEeccCCCceE--e--c------------C------------------------
Confidence 999999999999999876655 44555443322210 0 0 0
Q ss_pred EEeeecCcceEEecCCCCCCeEEEEEEEECCCCCCCCCCCcCceeccCCCCCCCCCCCcEEEEEcCCeEEEEEeccCCCC
Q psy7042 1933 CISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDG 2012 (2245)
Q Consensus 1933 ~~~~~~~~~~~~i~~l~~~~~y~~~~~a~n~~g~~~~s~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~ 2012 (2245)
. -..+..|....+.|.+.. ....+.|.+.
T Consensus 475 --------~---~~~v~~g~~v~l~C~~~~------------------------------------~~~~i~W~~~---- 503 (642)
T 1e07_A 475 --------N---SKPVEDKDAVAFTCEPEA------------------------------------QNTTYLWWVN---- 503 (642)
T ss_pred --------C---ceeecCCCeEEEEEECCC------------------------------------CCcEEEEEEC----
Confidence 0 011335667777776641 0134788753
Q ss_pred CCceeEEEEEEeeecCccceEEEEEEeccceEEeCCCcCCceEEEEEEEEeccccCCCcCCCCcccccCcccCCCceEEe
Q psy7042 2013 GSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIV 2092 (2245)
Q Consensus 2013 ~~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~s~~v~~~~~~~~~~p~~~~ 2092 (2245)
+..+. ...... .......|.|.++...|.|.|+|.|.|..|.. .+..+.+.+. ..|+.+..
T Consensus 504 g~~l~----------~~~~~~---~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~----~s~~~~l~V~--~~p~~~~~ 564 (642)
T 1e07_A 504 GQSLP----------VSPRLQ---LSNGNRTLTLFNVTRNDARAYVCGIQNSVSAN----RSDPVTLDVL--YGPDTPII 564 (642)
T ss_pred CEeCC----------CCCcEE---EcCCCcEEEEeecChhcCceEEEEeEcCCCCc----cCCCEEEEEE--eCCCccee
Confidence 11111 000000 01123579999999999999999999998843 2223343322 23445556
Q ss_pred eccceeeecCccEEEEEEEEeeCCCeEEEeeCCEeeCCCCcEEEEEeCcEEEEEEcCCCCCCCeEEEEEEEeCCceeeEE
Q psy7042 2093 PLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTK 2172 (2245)
Q Consensus 2093 ~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~ 2172 (2245)
.+.+..+.+|+.++|.|.+.|.|.|.|+|+|||..|..+. .|.|.++..+|+|.|+|.|.|.+|.++.+
T Consensus 565 ~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~i~~~~-----------~L~i~~~~~~d~G~Y~C~a~N~~G~~~~s 633 (642)
T 1e07_A 565 SPPDSSYLSGANLNLSCHSASNPSPQYSWRINGIPQQHTQ-----------VLFIAKITPNNNGTYACFVSNLATGRNNS 633 (642)
T ss_pred cCCceeEEcCCcEEEEEEeccCCCCeEEEEECCEECccCc-----------eEEECcccccCCeEEEEEEEecccCccee
Confidence 6677889999999999999999999999999999876432 79999999999999999999999999999
Q ss_pred EEEEEEc
Q psy7042 2173 AELIIMT 2179 (2245)
Q Consensus 2173 ~~l~V~~ 2179 (2245)
+.|.|..
T Consensus 634 ~~l~V~v 640 (642)
T 1e07_A 634 IVKSITV 640 (642)
T ss_pred EEEEEEE
Confidence 9998864
No 7
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=100.00 E-value=2.1e-39 Score=435.48 Aligned_cols=474 Identities=15% Similarity=0.177 Sum_probs=340.8
Q ss_pred cCCcceEEeCCCeEEEEEEEeeecCC---ceEEEECCeecc--------------CCCeEEEEE--cCcEEEEEEeeecc
Q psy7042 95 VPLKDLVVPLGKLLTLQCEATGTPVP---KCRWLRNGREIS--------------SGARYRVET--AGGVFRLHFNEVTD 155 (2245)
Q Consensus 95 ~~~~~~~v~~G~~v~L~C~~~g~p~~---~i~W~~~g~~l~--------------~~~~~~~~~--~~~~~~L~i~~~~~ 155 (2245)
..|.++.+.+|+.++|.|.+.+.|.+ .|.|+|++..+. ..+|+.+.. .++..+|.|.+++.
T Consensus 5 ~~P~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~ 84 (585)
T 2ocw_A 5 FGPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQ 84 (585)
T ss_pred cCcceeEEecCCcEEEEEeCCCCcCCCcccEEEEeCCCCCCceEEEECCCcccceeeceEEEEecCCCCEEEEEECCCCc
Confidence 35667889999999999999987654 799999986431 124666654 46667899999999
Q ss_pred CCCeEEEEEEEcCcccceeEEEEEecCCCeeecCCCceEEcCCCeEEEEEEEecC-CCceEEEeeCceeee----c----
Q psy7042 156 VDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGD-QPMEVSLTKNGRVVQ----S---- 226 (2245)
Q Consensus 156 ~d~G~Y~C~a~n~~g~~~~~~~l~V~~~P~~~~~~~~~~v~~G~~~~l~C~~~g~-p~~~i~W~~~g~~l~----~---- 226 (2245)
+|+|.|+|.|.|..|..+..+.|.|..+|.+...+....+.+|+.+.|.|.+.+. |++.+.|||++..+. .
T Consensus 85 ~D~G~Y~C~~~n~~~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~ 164 (585)
T 2ocw_A 85 DDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGY 164 (585)
T ss_pred ccCEEEEEEcccCCCCceEEEEEEEecCccccCCCccEEEEcCCCEEEEEEecCCCCCccEEEEECCCCCceEEecCCcc
Confidence 9999999999999988888999999999999999999999999999999999864 567899999876421 1
Q ss_pred -----CCceEEEEeCC---eEEEEEcccCccCceeEEEEEEcCCcceEEEEEEEEecCCCCCCCCcccceeeccceEEEe
Q psy7042 227 -----DDRFKFTVLDD---YIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHW 298 (2245)
Q Consensus 227 -----~~~~~~~~~~~---~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~s~~~~w 298 (2245)
..++.+...+. ...|.|.++..+|+|.|+|.|.|..|..+..+.|.|..+|+...
T Consensus 165 ~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~p~~~----------------- 227 (585)
T 2ocw_A 165 VNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPEPELV----------------- 227 (585)
T ss_pred cCccccCcEEEEeccCCCcEEEEEEccCChhHCeEEEEEeccCCccccceEEEEEccCCCcee-----------------
Confidence 23444443332 34799999999999999999999999999999999986542110
Q ss_pred cCCCCCCCceeEEEEEEEEecCCCceEEeeeccCcceEEEcCCCCCCEEEEEEEEEecCCCCCCCCCCCceecCCCCCCC
Q psy7042 299 NPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKP 378 (2245)
Q Consensus 299 ~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~c~a~n~~g~~~~~~~~~~~~~~~~~~~p 378 (2245)
.+..|+...+.|.+.+.
T Consensus 228 -----------------------------------------~~~~G~~v~l~C~~~~~---------------------- 244 (585)
T 2ocw_A 228 -----------------------------------------YEDLRGSVTFHCALGPE---------------------- 244 (585)
T ss_pred -----------------------------------------EEcCCCcEEEEEEcCCC----------------------
Confidence 02246667777765110
Q ss_pred CCCCCcEEEeecCCeeEEEec-CCCCCCCCCccEEEEEeeecCCCCcEEEeeeecCCceeecCCcccCceEEEEEEeecC
Q psy7042 379 SPPGIPVVTQVGGDFVNLSWD-KPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNE 457 (2245)
Q Consensus 379 ~~~~~~~v~~~~~~~~~l~W~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~ 457 (2245)
..+.+.+.|. ++.......+.. .-......................|.|.++...|.|.|+|.|.|.
T Consensus 245 -----------~~~~~~~~w~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~L~i~~v~~~d~G~Y~C~a~n~ 312 (585)
T 2ocw_A 245 -----------VANVAKFLCRQSSGENCDVVVNT-LGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCGAHSD 312 (585)
T ss_pred -----------CCCceEEEEEeCCCCCcceEEeC-CCcCCcccCCceEeeccCCCcEEEEEEccCChhhCEEEEEEEEcC
Confidence 0111467775 532110000000 000000000000000000011126999999999999999999995
Q ss_pred CCCCCCCC--CCCcEEecCCcccCCCceeccccccccccccceeeEEEEeccCcCeE----EEEe--CCe--ecCC----
Q psy7042 458 AGLSLPSS--ASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTI----SWLK--GSR--EITP---- 523 (2245)
Q Consensus 458 ~g~~~~s~--~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v----~W~~--~~~--~i~~---- 523 (2245)
|....+. ....+.+. .+|.+...+.+..+.+|+.+.|.|.+.+.|.+.+ +|++ +|. .+..
T Consensus 313 -g~~~~~~~~~~~~l~V~-----~~p~~~~~~~~~~~~~G~~v~l~C~~~~~p~p~i~~w~~W~~~~~g~~~~l~~~~~~ 386 (585)
T 2ocw_A 313 -GQLQEGSPIQAWQLFVN-----EESTIPRSPTVVKGVAGSSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGW 386 (585)
T ss_pred -CCccccCceeeEEEEEe-----cccccccCCcceEEEeCCcEEEEEecCCCCCccEEEEEEEEccCCCCCceeeeecce
Confidence 4332211 22333333 5677777788889999999999999999999887 8999 886 4422
Q ss_pred -----CccEEEEe--eCCeEEEEEecccccCCceEEEEEEeCCCCCCcceeEeEecCCCCCCCCCcccceEeeCCCeEEE
Q psy7042 524 -----SARHHIFA--EGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVV 596 (2245)
Q Consensus 524 -----~~~~~~~~--~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~~~p~~~~~~~~~~g~~~~l 596 (2245)
..++.+.. .++.+.|.|.++..+|+|.|+|.| |..|.....+.|.|...|.....+ ....+..|+.++|
T Consensus 387 ~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a-n~~g~~~~~~~l~V~~~~p~~~~~---~~~~v~~G~~v~L 462 (585)
T 2ocw_A 387 VKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLT-NGDTLWRTTVEIKIIEGEPNLKVP---GNVTAVLGETLKV 462 (585)
T ss_pred eecccCCCEEEeccCCCcEEEEEECCCChhhCEEEEEcc-cCCCccceeEEEEEecCccccccC---CceeEecCCcEEE
Confidence 34555543 234456999999999999999999 999998889999998755443333 3456889999999
Q ss_pred EEeee----ecCCCeEEEEeCCeEeeccCe-------EEEEecCCeEEEEEcCCCCCcCEEEEEEEEeCCCCcee-EEEE
Q psy7042 597 KIPFT----GYPKPKITWYRDNEVIESGGH-------FHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSA-IVKI 664 (2245)
Q Consensus 597 ~C~~~----g~p~~~i~W~~~~~~~~~~~~-------~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~-~~~l 664 (2245)
.|.+. +.|.+.|+|+++|..+..... ..+...+....|.|.++..+|+|.|+|.|.|..|.... .+.|
T Consensus 463 ~C~~~~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~~l 542 (585)
T 2ocw_A 463 PCHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWCGVKQGHFYGETAAVYV 542 (585)
T ss_pred EEEecCCCCCCccEEEEEeecCceeeeccCCCCCcceEEecCcccEEEEEECCCCcccCeEEEEEeEeCCCccEEEEEEE
Confidence 99997 778889999999987753321 12222344579999999999999999999999997654 4899
Q ss_pred EeeCCC
Q psy7042 665 QISDRP 670 (2245)
Q Consensus 665 ~v~~~P 670 (2245)
.|..+|
T Consensus 543 ~V~~~p 548 (585)
T 2ocw_A 543 AVEERK 548 (585)
T ss_pred EEEeee
Confidence 998877
No 8
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=100.00 E-value=1.4e-42 Score=485.36 Aligned_cols=597 Identities=13% Similarity=0.134 Sum_probs=129.3
Q ss_pred eceEEECCCccCCcEEEEEEEEcCCCCCCCCCccccEEEeeccCCCCCce---ecCCcceEEeCC--CeEEEEEEEeeec
Q psy7042 44 ECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDF---IVPLKDLVVPLG--KLLTLQCEATGTP 118 (2245)
Q Consensus 44 ~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~~~v~~~~~~~~P~~---~~~~~~~~v~~G--~~v~L~C~~~g~p 118 (2245)
..+|.|.+++.+|+|.|+|.+.+. ... ....+.+.. ..+|.+ ...+..+.+.+| +.++|.|.+.+ |
T Consensus 85 ~~~l~I~~~~~~d~G~Y~C~~~~~--~~~---~~~~v~v~~---~~~~~~~~~~~~~~~~~v~~G~~~~v~L~C~~~~-p 155 (772)
T 3v2a_R 85 CKTLTIPKVIGNDTGAYKCFYRET--DLA---SVIYVYVQD---YRSPFIASVSDQHGVVYITENKNKTVVIPCLGSI-S 155 (772)
T ss_dssp -------------------------------------------------------CEEEEEEESSCCCEEEECCCCSC-S
T ss_pred EEEEEECCCcHhhCEeEEEEEcCC--CEE---EEEEEEECC---CCCCceEcCcccceeEEEecCCCCeEEEEccCCC-C
Confidence 468999999999999999998721 111 112222221 122332 234566788999 99999999986 7
Q ss_pred CCceEEEEC--CeeccCCC-eEEEEEcCcEEEEEEeeeccCCCeEEEEEEEcCcccceeE-EEEEecCC--CeeecCC-C
Q psy7042 119 VPKCRWLRN--GREISSGA-RYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTS-SRVKIGTP--PRIDRMP-N 191 (2245)
Q Consensus 119 ~~~i~W~~~--g~~l~~~~-~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~~~--P~~~~~~-~ 191 (2245)
.+.+.|+|+ +..+.... .+... ... .|.|.+++.+|+|.|+|.|.+..+...+. ..+.+..+ |.+...+ .
T Consensus 156 ~~~v~w~~~~~~~~~~~~~~~~~~~-~~~--~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~~~v~~~~~~~v~~~~~~ 232 (772)
T 3v2a_R 156 NLNVSLCARYPEKRFVPDGNRISWD-SKK--GFTIPSYMISYAGMVFCEAKINDESYQSIMYIVVVVGYRIYDVVLSPSH 232 (772)
T ss_dssp SCCEEEEEETTTEEECCCSSSCEEE-TTT--EEEEEGGGTTTCSEEEEEEEETTEEEECCEEEEEEECCCEEEEEEECCS
T ss_pred CcEEEEEecCCCccccCCCceeecC-CCC--CeEecCCChhhCeEEEEEEEECCceEEEEEEEEEEecCccceeeeCCCC
Confidence 789999997 66555433 33332 222 49999999999999999999865543332 34445433 3344444 4
Q ss_pred ceEEcCCCeEEEEEEEec--CCCceEEEeeCceeeecCCceEE--------EEeCCeEEEEEcccCccCceeEEEEEEcC
Q psy7042 192 ALYIPEGDNTKVKIFYAG--DQPMEVSLTKNGRVVQSDDRFKF--------TVLDDYIIIFIKEIRKEDAGDYTVNLSNS 261 (2245)
Q Consensus 192 ~~~v~~G~~~~l~C~~~g--~p~~~i~W~~~g~~l~~~~~~~~--------~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 261 (2245)
...+.+|+.++|.|.+.+ .|.+.+.|+++|..+........ ........|.|.++..+|+|.|+|.|.|.
T Consensus 233 ~~~v~~G~~v~L~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~ 312 (772)
T 3v2a_R 233 GIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSG 312 (772)
T ss_dssp CEEEETTCCEEEEEEEEECTTCCCEEEEECC--------CEEEEC-----CCCEEEEEEEEESSCCSTTCSEEEEEEECS
T ss_pred ceEEecCCcEEEEEEEecCCCCceeEEEecCCccCCCceeeeccccccccccceEEEEEEEECcCCcCCCeEEEEEEEcC
Confidence 478999999999999987 45678999999988655333211 11123457999999999999999999999
Q ss_pred CcceEEEEEEEEecCCCCCCCC---cccceeeccceEEEecCCCCCCCceeEEEEEEEEecCCCceEEeeeccCcceEEE
Q psy7042 262 SGSVSGTFTINITGLPGPPIGP---LDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIV 338 (2245)
Q Consensus 262 ~g~~~~~~~l~V~~~p~~~~~~---~~~~~~~~~s~~~~w~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 338 (2245)
.|..+..+.|.|..+|.....+ .......+..+.+.+.... .....+.|+ +........... .....|.|
T Consensus 313 ~~~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~~-~p~~~v~W~---~~g~~l~~~~~~---~~~~~L~i 385 (772)
T 3v2a_R 313 LMTKKNSTFVRVHEKPFVAFGSGMESLVEATVGERVRIPAKYLG-YPPPEIKWY---KNGIPLESNHTI---KAGHVLTI 385 (772)
T ss_dssp SCEEEEEEEEEEECCCC---------------------------------------------------------------
T ss_pred CcceeEEEEEEEeCCCeeEeccCCCCcEEEcCCCcEEEEEEEee-eCCCeEEEE---ECCEeCCCCceE---ccceeEEE
Confidence 9998999999999877543322 1222233444444433100 001123333 222111110000 13467899
Q ss_pred cCCCCCCEEEEEEEEEecCCCCCCCCCCCceecCCCCCCCC------------CCCCcEEEeecCCeeE-EEecCCCCCC
Q psy7042 339 QGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPS------------PPGIPVVTQVGGDFVN-LSWDKPLDDG 405 (2245)
Q Consensus 339 ~~l~~~~~~~~~c~a~n~~g~~~~~~~~~~~~~~~~~~~p~------------~~~~~~v~~~~~~~~~-l~W~~~~~~~ 405 (2245)
..+...+.+.|+|.|.|..|....+....+.....|..... ....+.+...+.+... +.|.+.....
T Consensus 386 ~~v~~~d~G~Y~C~a~n~~g~~~~s~~~~l~v~~~P~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~ 465 (772)
T 3v2a_R 386 MEVSERDTGNYTVILTNPISKEKQSHVVSLVVYVPPQIGEKSLISPVDSYQYGTTQTLTCTVYAIPPPHHIHWYWQLEEE 465 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ecCChhcCceEEEEEEECCcCeEEEEEEEEEEecCCcccccccCCCccccCCCCcEEEEeEeccCCCCcEEEEEEcCCcc
Confidence 99999999999999999988654433332222222211100 0011111122334443 7776531110
Q ss_pred CCCccEEE-EEeeecCCCCcE-------------------EEeeeecCCceeecCCcccCceEEEEEEeecCCCCCCCCC
Q psy7042 406 GSRIQGYW-IDKHEVGSDAWQ-------------------RVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSS 465 (2245)
Q Consensus 406 ~~~~~~~~-~~~~~~~~~~~~-------------------~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~s~ 465 (2245)
........ ..........|. ...........|.|.++ .|.|.|+|.|.|..|...
T Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~L~i~~~--~d~G~Y~C~a~N~~g~~~--- 540 (772)
T 3v2a_R 466 CANEPSQAVSVTNPYPCEEWRSVEDFQGGNKIEVNKNQFALIEGKNKTVSTLVIQAA--NVSALYKCEAVNKVGRGE--- 540 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccCcCccccccccccccCCCcEEEeccceeeccCcceEEEEEEEeec--ccCeEEEEEEEccccccc---
Confidence 00000000 000000000000 00000111245777766 689999999999998654
Q ss_pred CCCcEEecCCcccCCCceeccccccccccccceeeEEEEeccCcCeEEEEeCCeecCCCccEEEE---------------
Q psy7042 466 ASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIF--------------- 530 (2245)
Q Consensus 466 ~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~~~~~--------------- 530 (2245)
....+.+. .+|.+...+. ..+.+|+++.|.|.+.+.|.+.+.|+|++..+.........
T Consensus 541 ~~~~l~V~-----~~p~i~~~p~-~~~~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 614 (772)
T 3v2a_R 541 RVISFHVT-----RGPEITLQPD-MQPTEQESVSLWCTADRSTFENLTWYKLGPQPLPIHVGELPTPVCKNLDTLWKLNA 614 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eeEEEEEE-----CCceeeccCC-cccccCCceEEEEeccCCCCCCcEEEEcCCcccccccCcccccccccccceeeccc
Confidence 23333333 3566655444 45789999999999999999999999998776543222111
Q ss_pred ---ee--CCeEEEEEecccccCCceEEEEEEeCCCCCC--cceeEeE--ecCCCCCCCCCcccceEeeCCCeEEEEEeee
Q psy7042 531 ---AE--GDTYTLIINSVYGVDADEYVCRAVNKGGVKS--TKAELII--MTAPKFNVPPRFRDTAYFDKGENVVVKIPFT 601 (2245)
Q Consensus 531 ---~~--~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~--~~~~l~v--~~~p~~~~~p~~~~~~~~~~g~~~~l~C~~~ 601 (2245)
.+ +....|.|.++..+|+|.|+|.|.|..|... ....|.| ..+|.+...+. ...+.+|+.++|.|.+.
T Consensus 615 ~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~s~~~~l~v~~~~~P~~~~~~~---~~~v~~g~~~~l~C~~~ 691 (772)
T 3v2a_R 615 TMFSNSTNDILIMELKNASLQDQGDYVCLAQDRKTKKRHCVVRQLTVLERVAPTITGNLE---NQTTSIGESIEVSCTAS 691 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eeeecCCCceEEEEECCCCccCCcEEEEEEEeCCCCeEEEEEEeecccccCCCEeecCCC---ceEEeCCCCEEEEEEeC
Confidence 11 1234699999999999999999999665443 2345555 56676655442 35578899999999999
Q ss_pred ecCCCeEEEEeCCeEeeccCeEEEEecCCeEEEEEcCCCCCcCEEEEEEEEeCCCCceeEEEEEeeCCCCCCCC
Q psy7042 602 GYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQF 675 (2245)
Q Consensus 602 g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~P~~p~~ 675 (2245)
|.|.|.|+|+|+|..+..+.++.+. .....|.|.++..+|+|.|+|.|.|..|..+..+.|.|.++|+....
T Consensus 692 g~P~p~v~W~k~g~~l~~~~~~~~~--~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~p~~~~~ 763 (772)
T 3v2a_R 692 GNPPPQIMWFKDNETLVEDSGIVLK--DGNRNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFIIEGAQEKTNL 763 (772)
T ss_dssp --------------------------------------------------------------------------
T ss_pred ccCCCeEEEEECCeECcCCCCeEEc--CCCcEEEECcCCHHHCEEEEEEEEeCCcceeEEEEEEEECCCCcccc
Confidence 9999999999999988776655443 33578999999999999999999999999999999999999886543
No 9
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=100.00 E-value=6.3e-41 Score=442.52 Aligned_cols=422 Identities=14% Similarity=0.147 Sum_probs=307.1
Q ss_pred CCcceEEecc---eeeeeceEEECCCccCCcEEEEEEEEcCCCCCCCCCccccEEEeeccCCCCCceecCCcceEEeCCC
Q psy7042 30 GGAIWLKCND---YNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGK 106 (2245)
Q Consensus 30 ~~~~w~~~~~---~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~~~v~~~~~~~~P~~~~~~~~~~v~~G~ 106 (2245)
+...|++++. ......+|.|.+++.+|+|.|+|.|.| |. ...+.+.+ . .+|.+...+.+..+.+|+
T Consensus 62 ~~v~W~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n--g~------~~~~~l~V--~-~p~~~~~~~~~~~v~~G~ 130 (524)
T 2ec8_A 62 GFVKWTFEILDETNENKQNEWITEKAEATNTGKYTCTNKH--GL------SNSIYVFV--R-DPAKLFLVDRSLYGKEDN 130 (524)
T ss_dssp TEEEEEEESSSCCEEECSSEEEESSCCSTTCEEEEEEETT--SC------EEEEEEEC--C-CSSCSBCCCCCCCEETTS
T ss_pred ceEEEcCCCccccccCccceEEEcccchhhCEEEEEeecC--Cc------ceEEEEEE--C-CCCcccccccceEEEcCC
Confidence 3667888775 334568999999999999999999998 42 12223322 2 355555777788999999
Q ss_pred eEEEEEEEeeecCCceEEEE-CCeeccCCCeEEEEEcCcEEEEEEeeeccCCCe-EEEEEEEcCccccee-EEEEEec--
Q psy7042 107 LLTLQCEATGTPVPKCRWLR-NGREISSGARYRVETAGGVFRLHFNEVTDVDNG-DYTCEAYNSVGFAHT-SSRVKIG-- 181 (2245)
Q Consensus 107 ~v~L~C~~~g~p~~~i~W~~-~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G-~Y~C~a~n~~g~~~~-~~~l~V~-- 181 (2245)
.++|.|.+.+.|.+.|.|+| ||..+..+.++.+...+ .|.|.+++.+|+| .|+|.|.|..|...+ .+.|.|.
T Consensus 131 ~v~l~C~~~~~~~~~v~W~~~~g~~l~~~~~~~~~~~~---~L~i~~~~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~ 207 (524)
T 2ec8_A 131 DTLVRCPLTDPEVTNYSLKGCQGKPLPKDLRFIPDPKA---GIMIKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRPA 207 (524)
T ss_dssp CEEECCCBSCCCCSCEEEECSSSCCCCSSCEEEEETTT---EEEEESCCGGGTTCEEEEEEC----CCCCCCEECCEECC
T ss_pred eEEEECcCCCCccceEEEEccCCcCcCCCCceeECCCc---cEEEeccchhhCCceEEEEEEECCceEEEEEEEEEEEeC
Confidence 99999999987778999988 89999888788776555 4999999999999 999999998877654 7788886
Q ss_pred --CCCeeecCCCceEEcCCCeEEEEEEEecCCCce-EEEeeCceee--ecCCceEEE---EeCCeEEEEEcccCccCcee
Q psy7042 182 --TPPRIDRMPNALYIPEGDNTKVKIFYAGDQPME-VSLTKNGRVV--QSDDRFKFT---VLDDYIIIFIKEIRKEDAGD 253 (2245)
Q Consensus 182 --~~P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~-i~W~~~g~~l--~~~~~~~~~---~~~~~~~L~i~~~~~~d~G~ 253 (2245)
.+|.+...+....+.+|+.++|.|.+.|.|.+. |+|+|+|..+ .......+. .......|.|.++..+|+|.
T Consensus 208 ~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~ 287 (524)
T 2ec8_A 208 FKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGV 287 (524)
T ss_dssp CCSCCEEECSCSEEEEETTSCEEEEEEEEESSTTCEEEEEETTCSCCCCEEEEEEECSSSCEEEEEEEEESSCCTTTCEE
T ss_pred CCCCCcEEecCCcceEEcCCcEEEEEEEecCCCcEEEEEEeCCCCCccccccccccccCCccceEEEEEECCCCHHHCEE
Confidence 789999999999999999999999999999876 9999999883 322222222 11234689999999999999
Q ss_pred EEEEEEcCCcceEEEEEEEEecCCCCCCCCcccceeeccceEEEecCCCCCCCceeEEEEEEEEecCCCceEEeeeccCc
Q psy7042 254 YTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHD 333 (2245)
Q Consensus 254 Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~s~~~~w~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (2245)
|+|.|.|..|.....+.|.|..+|....
T Consensus 288 Y~C~a~n~~g~~~~~~~l~V~~~p~~~~---------------------------------------------------- 315 (524)
T 2ec8_A 288 FMCYANNTFGSANVTTTLEVVDKGFINI---------------------------------------------------- 315 (524)
T ss_dssp EEEEEECSSCEEEEEEEEEEESSCEEEE----------------------------------------------------
T ss_pred EEEEEEecCCceEEEEEEEEeccCceEe----------------------------------------------------
Confidence 9999999999988888888875431000
Q ss_pred ceEEEcCCCCCCEEEEEEEEEecCCCCCCCCCCCceecCCCCCCCCCCCCcEEEeecCCeeEEEecCCCCCCCCCccEEE
Q psy7042 334 TTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYW 413 (2245)
Q Consensus 334 ~~~~i~~l~~~~~~~~~c~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~v~~~~~~~~~l~W~~~~~~~~~~~~~~~ 413 (2245)
T Consensus 316 -------------------------------------------------------------------------------- 315 (524)
T 2ec8_A 316 -------------------------------------------------------------------------------- 315 (524)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEeeecCCCCcEEEeeeecCCceeecCCcccCceEEEEEEeecCCCCCCCCCCCCcEEecCCcccCCCceeccccccccc
Q psy7042 414 IDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAI 493 (2245)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~s~~~~~v~~~~~~~~~~p~~~~~~~~~~~~ 493 (2245)
.| ..+.+..+.
T Consensus 316 ------------------------------------------------------------------~~---~~~~~~~v~ 326 (524)
T 2ec8_A 316 ------------------------------------------------------------------FP---MINTTVFVN 326 (524)
T ss_dssp ------------------------------------------------------------------EE---SSCSEEEEC
T ss_pred ------------------------------------------------------------------ec---CCCceEEEc
Confidence 00 001234567
Q ss_pred cccceeeEEEEeccCcCe-EEEEeCCeecCCCc-cEEEEeeC----CeEEEEEecccccCCceEEEEEEeCCCCCCccee
Q psy7042 494 QNHNAQFQCTITGCPKPT-ISWLKGSREITPSA-RHHIFAEG----DTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAE 567 (2245)
Q Consensus 494 ~g~~~~l~C~~~g~p~~~-v~W~~~~~~i~~~~-~~~~~~~~----~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~ 567 (2245)
+|+.+.|.|.+.|.|.+. +.|+|++..+.... ++....++ ....|.|.++..+|+|.|+|.|.|..|....++.
T Consensus 327 ~G~~v~l~C~~~g~P~p~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~ 406 (524)
T 2ec8_A 327 DGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVNAAIAFN 406 (524)
T ss_dssp TTCCEEEEEEEEEESCCCEEEEESSSCBCSSSBCCEESCCSSSCCEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEE
T ss_pred CCCcEEEEEEEeecCCCcEEEEEECCeeccCCccceeEEccCCCceeEEEEEEeecCcccCeEEEEEEEecCceEEEEEE
Confidence 899999999999999999 99999999988765 33333333 3468999999999999999999999999999999
Q ss_pred EeEecCCCCCCCCCcccceEeeCCCeEEEEEeeeecCCCeEEEEeCCeEeec--------cCeE---EEEecCCeEE-EE
Q psy7042 568 LIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIES--------GGHF---HVETSERHAI-LT 635 (2245)
Q Consensus 568 l~v~~~p~~~~~p~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~~~~~~~--------~~~~---~~~~~~~~~~-l~ 635 (2245)
|.|..+|.+...+. ..+| +|.|.+.|.|.|.|+|++++..+.. +.+. .....+.... ..
T Consensus 407 l~V~~~P~i~~~~~------~~~g---~l~C~~~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~ 477 (524)
T 2ec8_A 407 VYVNTKPEILTYDR------LVNG---MLQCVAAGFPEPTIDWYFCPGTEQRCSASVLPVDVQTLNSSGPPFGKLVVQSS 477 (524)
T ss_dssp EEECEEEEEEEEEC------CSSS---CEEEEEEEESCCEEECCCC----------CCCCCCCCCCC-CCSSSCEEEEEE
T ss_pred EEEecCCeEeeccc------CcCc---EEEEEEEeecCCEEEEEECCCcccccccccCCCCceeeeeccCCCCcceEEEE
Confidence 99998887654332 3345 9999999999999999999765521 1111 1111111111 12
Q ss_pred EcCCCCCcCEEEEEEEEeCCCCceeEEEEEeeCCCCCCCC
Q psy7042 636 IRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQF 675 (2245)
Q Consensus 636 i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~P~~p~~ 675 (2245)
|.....+|.|.|+|.|.|..|..+..+.|.|.++|....+
T Consensus 478 l~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~V~e~~~~~~~ 517 (524)
T 2ec8_A 478 IDSSAFKHNGTVECKAYNDVGKTSAYFNFAFKGNNKEQIH 517 (524)
T ss_dssp ECCCSCCC-----CEEECSSCEEECCCCCCC---------
T ss_pred EEEEEccCCEEEEEEEEcCCCceEEEEEEEEecCCHHHcC
Confidence 4444569999999999999999999999999887765433
No 10
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=100.00 E-value=9.9e-42 Score=476.65 Aligned_cols=646 Identities=17% Similarity=0.172 Sum_probs=111.5
Q ss_pred ceeeEEecCCeEEEEeeeecCCCCceeEecCCccccCCCCcEEEeee---cceeEEEEccCCcCCceEEEEEEEcCCcce
Q psy7042 1429 VRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLT---MNSASLVVKNSQRSDGGQYRLQLKNPAGFD 1505 (2245)
Q Consensus 1429 ~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~---~~~~~L~i~~~~~~d~G~Y~c~a~n~~g~~ 1505 (2245)
...+.+.+|++++|.|...+ .+.|++.+...... .+..+... ....+|.|.+++.+|+|.|+|.+.+. ..
T Consensus 38 ~~~~~v~~G~~vtL~C~~~~----~v~W~~~~~~~~~~-~~~~~~~~~~~~~~~~l~I~~~~~~d~G~Y~C~~~~~--~~ 110 (772)
T 3v2a_R 38 KDILTIKANTTLQITCRGQR----DLDWLWPNNQSGSE-QRVEVTECSDGLFCKTLTIPKVIGNDTGAYKCFYRET--DL 110 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCeEEEcCCCCEEEEEeccC----CeeeeCCCCCCccC-CceeEEEcCCCcEEEEEEECCCcHhhCEeEEEEEcCC--CE
Confidence 34678999999999999764 57898876543322 13322221 23569999999999999999998732 22
Q ss_pred eeEEEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccchhccccccCcccccC--CeEEEEecCCCCCCCCccce
Q psy7042 1506 TATLHSRLRTLPDSVNPRCHLPSSTSKERPKFPTHPNHQPWLKWARASLTSKGVDSTE--DSISLVWSKPRHDGGSPIQR 1583 (2245)
Q Consensus 1506 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~w~~p~~~~~~~i~~ 1583 (2245)
...+.+.|..+..++. +..... ........+ +.++|.|....
T Consensus 111 ~~~~~v~v~~~~~~~~----------------~~~~~~-----------~~~~~v~~G~~~~v~L~C~~~~--------- 154 (772)
T 3v2a_R 111 ASVIYVYVQDYRSPFI----------------ASVSDQ-----------HGVVYITENKNKTVVIPCLGSI--------- 154 (772)
T ss_dssp -------------------------------------C-----------EEEEEEESSCCCEEEECCCCSC---------
T ss_pred EEEEEEEECCCCCCce----------------EcCccc-----------ceeEEEecCCCCeEEEEccCCC---------
Confidence 3344444443221100 000000 000011223 55777776532
Q ss_pred EEEEEEecCCccceEeeccccCCccceEEEEeec--CccCCCCCCccceeeEeeeCCeeeEEeccceeeeceEEEeccCC
Q psy7042 1584 YIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSE--GKSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVE 1661 (2245)
Q Consensus 1584 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 1661 (2245)
+...+.|+++ |..+...... . .+ .....|.|.+++.
T Consensus 155 ------------------------p~~~v~w~~~~~~~~~~~~~~~-~-----------~~------~~~~~l~i~~~~~ 192 (772)
T 3v2a_R 155 ------------------------SNLNVSLCARYPEKRFVPDGNR-I-----------SW------DSKKGFTIPSYMI 192 (772)
T ss_dssp ------------------------SSCCEEEEEETTTEEECCCSSS-C-----------EE------ETTTEEEEEGGGT
T ss_pred ------------------------CCcEEEEEecCCCccccCCCce-e-----------ec------CCCCCeEecCCCh
Confidence 0123778887 5544321110 0 00 1134799999999
Q ss_pred CCeEEEEEEEEcCCCcCCCCCcCcceEEeeecCCCCCceec-cCCceEEcCCCeEEEEEEecC--cCCCeEEEeeCCEec
Q psy7042 1662 GNDYEFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIV-PLKDLVVPLGKLLTLQCEATG--TPVPKCRWLRNGREI 1738 (2245)
Q Consensus 1662 ~d~g~y~c~a~n~~g~~~~~~~~~~v~~~~~~~~~~p~~~~-~~~~~~~~~G~~v~L~C~~~~--~p~~~v~W~~~~~~l 1738 (2245)
.|.|.|+|.+.+..+... +....+.. ....+|.+.. ++....+.+|++++|.|.+.+ .+.+.+.|++++..+
T Consensus 193 ~d~G~Y~C~~~~~~~~~~----s~~~~~~v-~~~~~~~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~W~~~~~~~ 267 (772)
T 3v2a_R 193 SYAGMVFCEAKINDESYQ----SIMYIVVV-VGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKH 267 (772)
T ss_dssp TTCSEEEEEEEETTEEEE----CCEEEEEE-ECCCEEEEEEECCSCEEEETTCCEEEEEEEEECTTCCCEEEEECC----
T ss_pred hhCeEEEEEEEECCceEE----EEEEEEEE-ecCccceeeeCCCCceEEecCCcEEEEEEEecCCCCceeEEEecCCccC
Confidence 999999999997644221 11112211 1123333443 334478999999999999987 456789999999876
Q ss_pred cCCceEEE--------EecCcEEEEEEeeeccCCCeEEEEEEecCceeeEEEEEEEecCCCccccCC---CceEEcCCCe
Q psy7042 1739 SSGARYRV--------ETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMP---NALYIPEGDN 1807 (2245)
Q Consensus 1739 ~~~~~~~~--------~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~l~V~~~p~~~~~~---~~~~~~~g~~ 1807 (2245)
........ ........|.|.+++.+|+|.|+|.+.|..+.......|.|..+|.+...+ ....+.+|+.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~ 347 (772)
T 3v2a_R 268 QHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEKPFVAFGSGMESLVEATVGER 347 (772)
T ss_dssp ----CEEEEC-----CCCEEEEEEEEESSCCSTTCSEEEEEEECSSCEEEEEEEEEEECCCC------------------
T ss_pred CCceeeeccccccccccceEEEEEEEECcCCcCCCeEEEEEEEcCCcceeEEEEEEEeCCCeeEeccCCCCcEEEcCCCc
Confidence 54332211 112234569999999999999999999999988888999999988765433 4567889999
Q ss_pred EEEEEEEeccCCcEEEEEECCEEeecCCceEEEEcCCeEEEEEcccCcccceEEEEEEEcCCeee--EEEEEEEEeCCCC
Q psy7042 1808 TKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV--SGTFTINITGLPG 1885 (2245)
Q Consensus 1808 ~~l~C~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~--~~~~~l~v~~~p~ 1885 (2245)
+.|.|.+.|.|.+.+.|+++|..+....... ....|.|.++..+|+|.|+|.|.|..|.. +..+.|.|..+|.
T Consensus 348 v~l~C~~~~~p~~~v~W~~~g~~l~~~~~~~-----~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~s~~~~l~v~~~P~ 422 (772)
T 3v2a_R 348 VRIPAKYLGYPPPEIKWYKNGIPLESNHTIK-----AGHVLTIMEVSERDTGNYTVILTNPISKEKQSHVVSLVVYVPPQ 422 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEEEeeeCCCeEEEEECCEeCCCCceEc-----cceeEEEecCChhcCceEEEEEEECCcCeEEEEEEEEEEecCCc
Confidence 9999999999999999999999886542221 33679999999999999999999998865 4456666665554
Q ss_pred CCCCCce---ecccccceEEEEecCCCCCCCeeeeEEEEEE--------------EcCCCCceEEE--------------
Q psy7042 1886 PPIGPLD---VSEITKHTCTLHWNPPKYDGGLKVTHYVVER--------------RDISMPHWICI-------------- 1934 (2245)
Q Consensus 1886 ~~~~~~~---~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~--------------~~~~~~~~~~~-------------- 1934 (2245)
.....+. .....+..+.|.|...+......+.|+.-.. .......|..+
T Consensus 423 ~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~ 502 (772)
T 3v2a_R 423 IGEKSLISPVDSYQYGTTQTLTCTVYAIPPPHHIHWYWQLEEECANEPSQAVSVTNPYPCEEWRSVEDFQGGNKIEVNKN 502 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccCCCccccCCCCcEEEEeEeccCCCCcEEEEEEcCCccccccccccccccCcCccccccccccccCCCcEEEecc
Confidence 3221110 0123344555555532211111133332100 00000111110
Q ss_pred ----eee--cCcceEEecCCCCCCeEEEEEEEECCCCCCCCCCCcCceeccCCCCCCCCCCCcEEEEEcCCeEEEEEecc
Q psy7042 1935 ----STT--CHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKP 2008 (2245)
Q Consensus 1935 ----~~~--~~~~~~~i~~l~~~~~y~~~~~a~n~~g~~~~s~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~v~l~W~~p 2008 (2245)
... .....+.|..+ .+.+.|+|.|.|..|.......+.+.. . |.....+......+..+.|.|...
T Consensus 503 ~~~~~~~~~~~~~~L~i~~~--~d~G~Y~C~a~N~~g~~~~~~~l~V~~--~----p~i~~~p~~~~~~G~~v~l~C~~~ 574 (772)
T 3v2a_R 503 QFALIEGKNKTVSTLVIQAA--NVSALYKCEAVNKVGRGERVISFHVTR--G----PEITLQPDMQPTEQESVSLWCTAD 574 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceeeccCcceEEEEEEEeec--ccCeEEEEEEEccccccceeEEEEEEC--C----ceeeccCCcccccCCceEEEEecc
Confidence 001 11134555554 467899999999998766554433322 1 111111112233445555555432
Q ss_pred CCCCCCceeEEEEEEeeec--------------CccceEEE----EEEeccceEEeCCCcCCceEEEEEEEEeccccCCC
Q psy7042 2009 LDDGGSRIQGYWIDKHEVG--------------SDAWQRVN----VAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLP 2070 (2245)
Q Consensus 2009 ~~~~~~~i~~y~i~~~~~~--------------~~~~~~~~----~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~ 2070 (2245)
.... ..+.-|+....... ...|.... ........|.|.++...|+|.|+|.|.|..|....
T Consensus 575 ~~p~-~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~ 653 (772)
T 3v2a_R 575 RSTF-ENLTWYKLGPQPLPIHVGELPTPVCKNLDTLWKLNATMFSNSTNDILIMELKNASLQDQGDYVCLAQDRKTKKRH 653 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCC-CCcEEEEcCCcccccccCcccccccccccceeeccceeeecCCCceEEEEECCCCccCCcEEEEEEEeCCCCeEE
Confidence 1100 00111100000000 00010000 11112245999999999999999999996553211
Q ss_pred cCCCCcccccCcccCCCceEEeeccceeeecCccEEEEEEEEeeCCCeEEEeeCCEeeCCCCcEEEEEeCcEEEEEEcCC
Q psy7042 2071 SSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSV 2150 (2245)
Q Consensus 2071 ~~~s~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v 2150 (2245)
.....+.+. ...+|.|...+.+..+.+|+.++|.|.+.|.|.|.|+|+|||..|..+.++.+..++ ..|+|.++
T Consensus 654 -s~~~~l~v~---~~~~P~~~~~~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~--~~L~I~~v 727 (772)
T 3v2a_R 654 -CVVRQLTVL---ERVAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKDGN--RNLTIRRV 727 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -EEEEeeccc---ccCCCEeecCCCceEEeCCCCEEEEEEeCccCCCeEEEEECCeECcCCCCeEEcCCC--cEEEECcC
Confidence 112222222 345688988888889999999999999999999999999999999887765554433 48999999
Q ss_pred CCCCCeEEEEEEEeCCceeeEEEEEEEEcCCCCC
Q psy7042 2151 YGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFN 2184 (2245)
Q Consensus 2151 ~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~p~~~ 2184 (2245)
..+|+|.|+|.|.|.+|..++++.|.|..+|...
T Consensus 728 ~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~p~~~ 761 (772)
T 3v2a_R 728 RKEDEGLYTCQACSVLGCAKVEAFFIIEGAQEKT 761 (772)
T ss_dssp ----------------------------------
T ss_pred CHHHCEEEEEEEEeCCcceeEEEEEEEECCCCcc
Confidence 9999999999999999999999999999887654
No 11
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=100.00 E-value=4.9e-39 Score=414.80 Aligned_cols=440 Identities=13% Similarity=0.117 Sum_probs=290.0
Q ss_pred ceEEeCCCeEEEEEEEeeecCCceEEEECCeeccCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEEcCcccceeEEEE
Q psy7042 99 DLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRV 178 (2245)
Q Consensus 99 ~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 178 (2245)
.+.|.+|++++|.|.+.+.|...+.|++++..+.....+... ..+..+|.|.+++.+|+|.|+|.|.|..|.....++|
T Consensus 57 ~~~v~~g~~~~L~c~~~~~~~~~~~W~~~~~~l~~~~~~~~~-~r~~~SL~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~v 135 (527)
T 3qs9_E 57 AVEVDVSASITLQVLVDAPGNISCLWVFKHSSLNCQPHFDLQ-NRGVVSMVILKMTETQAGEYLLFIQSEATNYTILFTV 135 (527)
T ss_dssp EEEECSSCCEEEEEECSCCSSCEEEEEETTEEECCCCBC------CEEEEEESSCCSSSCSEEEEEEEC--CEEEEEEEE
T ss_pred eEEEeccccEEEEEEEecCCceeEEEEecCCccCcccccCCC-cceEEEEEECcCChhhCeeEEEEEEeccccEEEEEEE
Confidence 689999999999999998888899999999987765555432 2345579999999999999999999998877777777
Q ss_pred EecCCCeeecCCCceEEcCCCeEEEEEEEecCCCceEEEeeCceeeecCCceEEEEeCCeEEEEEcccCccCceeEEEEE
Q psy7042 179 KIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNL 258 (2245)
Q Consensus 179 ~V~~~P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a 258 (2245)
.|... .+.....+.....|+.+.|.|.+.|.|.|.|+|++++..+..... ............+..+|+|.|+|.|
T Consensus 136 ~v~~~-~~~~~~~p~~~~~~~~~~L~C~a~G~P~P~i~W~~~~~~~~~~~~----~~~~~~~~~~~~~~~~d~G~Y~C~A 210 (527)
T 3qs9_E 136 SIRNT-LLYTLRRPYFRKMENQDALVCISESVPEPIVEWVLCDSQGESCKE----ESPAVVKKEEKVLHELFGTDIRCCA 210 (527)
T ss_dssp EEC------CEEEEEEEECSSSSCEEEEEEESSCCEEEEEEC-----------------CEEECCSEECCCCSSCEEEEE
T ss_pred EECCc-eeeccCCCcEEecCCceEEEEEEceecCCeEEEEECCCCCccccc----cCCcEEEEeeeeccccCCEEEEEEE
Confidence 77622 222222334456788889999999999999999998877642211 0011112233445688999999999
Q ss_pred EcCCcceEEE-EEEEEecCCCCCCCCcccceeeccceEEEecCCCCCCCceeEEEEEEEEecCCCceEEeeeccCcceEE
Q psy7042 259 SNSSGSVSGT-FTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFI 337 (2245)
Q Consensus 259 ~n~~g~~~~~-~~l~V~~~p~~~~~~~~~~~~~~~s~~~~w~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (2245)
.|..|..... +.|.|...|..+.. .
T Consensus 211 ~N~~G~~~~~~~~l~V~~~p~~~p~----------------------------------------------------~-- 236 (527)
T 3qs9_E 211 RNELGRECTRLFTIDLNQTPQTTLP----------------------------------------------------Q-- 236 (527)
T ss_dssp ECSSCEEEEECEEEESSSCCCCSCC----------------------------------------------------E--
T ss_pred EeCCCcccceEEEEEEeccCccCCC----------------------------------------------------c--
Confidence 9999987654 77887766543210 0
Q ss_pred EcCCCCCCEEEEEEEEEecCCCCCCCCCCCceecCCCCCCCCCCCCcEEEeecCCeeEEEecCCCCCCCCCccEEEEEee
Q psy7042 338 VQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKH 417 (2245)
Q Consensus 338 i~~l~~~~~~~~~c~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~v~~~~~~~~~l~W~~~~~~~~~~~~~~~~~~~ 417 (2245)
..+..|+...+.|.+.. +.+.+.+.|.++....... ..+.....
T Consensus 237 -~~v~~G~~v~L~C~~~~----------------------------------g~p~p~i~W~k~g~~l~~~-~~~~~~~~ 280 (527)
T 3qs9_E 237 -LFLKVGEPLWIRCKAVH----------------------------------VNHGFGLTWELENKALEEG-NYFEMSTY 280 (527)
T ss_dssp -EEECTTSCEEEEEEEEE----------------------------------SSSCCCEEEECSSSCCCGG-GEEEEEEE
T ss_pred -eEEeCCCeEEEEEEEcc----------------------------------CCCCeEEEEEECCEECCCC-ceeeeeee
Confidence 01345788888998842 2334579999864332111 11111000
Q ss_pred ecCCCCcEEEeeeecCCceeecCCcccCceEEEEEEeecCCCCCCCCCCCCcEEecCCcccCCCceeccc--cccccccc
Q psy7042 418 EVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPL--RNANAIQN 495 (2245)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~s~~~~~v~~~~~~~~~~p~~~~~~--~~~~~~~g 495 (2245)
.. .. .......|.|.++..+|+|.|+|.|.|. ......+.+. .+|.+...+ ....+.+|
T Consensus 281 ~~--~~------~~~~~~~L~I~~v~~~DsG~Y~C~a~N~------~~~~~~L~V~-----~~p~i~~~~~~~~~~v~~G 341 (527)
T 3qs9_E 281 ST--NR------TMIRILFAFVSSVARNDTGYYTCSSSKH------PSQSALVTIV-----EKGFINATNSSEDYEIDQY 341 (527)
T ss_dssp ET--TT------EEEEEEEEEESSCCGGGCEEEEEEETTE------EEEEEEEEEC-------CEEECCCSCCEECCCTT
T ss_pred cc--Cc------ceeeEEEEEEccCCcccCeEEEEEEEeC------CCceEEEEEE-----ccCccccccCcccEEEcCC
Confidence 00 00 0111245999999999999999999998 1234444443 345554433 35678899
Q ss_pred cceeeEEEEeccCcCeEEEEeCCeecCCCccEEEEeeCCeEEEEEecccccCCceEEEEEEeCCCCCCcceeEeEecCCC
Q psy7042 496 HNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPK 575 (2245)
Q Consensus 496 ~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~ 575 (2245)
+.+.|.|.+.|.|.|.++|+|+|..+....++.. ....|.|.++..+|+|.|+|.|.|..|.....+.|.|..+|.
T Consensus 342 ~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~~----~~~~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L~V~~~P~ 417 (527)
T 3qs9_E 342 EEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGLD----NGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRRKPQ 417 (527)
T ss_dssp CCCCEEEEEEEESCCEEEEEETTEEEECBCCBCS----SSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC--CCCE
T ss_pred CeEEEEEEEEecCCCEEEEEECCEECcCCccccc----CCcEEEEecCCcccCEEEEEEEEeCCCcEEEEEEEEEecCCe
Confidence 9999999999999999999999999876554221 223799999999999999999999999999999999998887
Q ss_pred CCCCCCcccceEeeCCCeEEEEEeeeecCCCeEEEEeCCeEeeccCe------EE-----EEecCCeEEEEEcCCCCCcC
Q psy7042 576 FNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGH------FH-----VETSERHAILTIRDASNVDT 644 (2245)
Q Consensus 576 ~~~~p~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~~~~~~~~~~------~~-----~~~~~~~~~l~i~~~~~~d~ 644 (2245)
+...+. | ..|.|.+.|.|.|.|+|++++........ .. .........+.|.-....|.
T Consensus 418 i~~~~~---------~--~~l~C~a~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~d~ 486 (527)
T 3qs9_E 418 VLAEAS---------A--SQASCFSDGYPLPSWTWKKCSDKSPNCTEEITEGVWNRKANRKVFGQWVSSSTLNMSEAIKG 486 (527)
T ss_dssp EEECCC---------C--E---EEEECSSCCEEEEECCC-----CCCCCCCCEEEC---------CEEEEECCCCCSSCS
T ss_pred EEEeCC---------C--CEEEEEEEEEcCCeEEEEECCCCcCCCccccccccceeccccccCCceEEEEEEEEEEcCCC
Confidence 643321 2 35799999999999999997654321100 00 01111122333443445699
Q ss_pred EEEEEEEEeCCCCceeEEEEEeeC
Q psy7042 645 APYRVVAENDLGMDSAIVKIQISD 668 (2245)
Q Consensus 645 g~y~C~a~n~~g~~~~~~~l~v~~ 668 (2245)
|.|+|.|.|.+|..+..+.|.|.+
T Consensus 487 G~Y~C~A~N~~G~~~~~~~L~V~~ 510 (527)
T 3qs9_E 487 FLVKCCAYNSLGTSCETILLNSPG 510 (527)
T ss_dssp CEEEEEEECSSCEEEEEEEC----
T ss_pred EEEEEEEEeCCCCceeEEEEecCC
Confidence 999999999999999999987644
No 12
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=100.00 E-value=2.6e-38 Score=432.83 Aligned_cols=445 Identities=18% Similarity=0.189 Sum_probs=327.1
Q ss_pred ccceeeEEEEeccCcCeEEEEeCCeecCCCccEEEEeeCCeEEEEEecc-cccCCceEEEEEEeCCCCCCcce-eEeE--
Q psy7042 495 NHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSV-YGVDADEYVCRAVNKGGVKSTKA-ELII-- 570 (2245)
Q Consensus 495 g~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~v-~~~d~G~Y~C~a~n~~g~~~~~~-~l~v-- 570 (2245)
+..+.|.|.+.|.|.+.+.|.|+|..+..-.+. .+.|..+ .....+.|.|.+.|..|...... .+.+
T Consensus 91 ~g~l~v~c~~~g~P~p~i~W~k~g~~~~~~~~~---------~~~i~~~~~~~~~l~~~~va~~~~G~~~~~~v~~~~~~ 161 (731)
T 2v5y_A 91 PGLLNVYVKVNNGPLGNPIWNISGDPTRTWNRA---------ELAISTFWPNFYQVIFEVITSGHQGYLAIDEVKVLGHP 161 (731)
T ss_dssp SEEEEEEEEETTCCCCSEEEEECCCCCSSCEEE---------EEEECCCTTSCEEEEEEEEECSSCCEEEECCBEEESSC
T ss_pred cceEEEEEecCCCCccceeEEEeCCcCCceeEE---------EEEEeecCCCceEEEEEEEecCCceEEEEeeEEeeecc
Confidence 457899999999999999999999876432221 3444443 22234667777666666543221 1111
Q ss_pred -ecCCCCCCCCCcccceEeeCCCeEEEEEeeeecCCCeEE-EE--eCCeEeeccCeEEEEecCCeEEEEEcCCCCCcCEE
Q psy7042 571 -MTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKIT-WY--RDNEVIESGGHFHVETSERHAILTIRDASNVDTAP 646 (2245)
Q Consensus 571 -~~~p~~~~~p~~~~~~~~~~g~~~~l~C~~~g~p~~~i~-W~--~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~ 646 (2245)
..+|.+..+ ....+..|+.++|.|.+.|.|.|.+. |+ ++|..+.......+........|.|.++.+.|.|.
T Consensus 162 ~~~~p~~~~~----~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~~~~~~~~~~~~~~~l~I~~~~~~d~g~ 237 (731)
T 2v5y_A 162 CTRTPHFLRI----QNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGK 237 (731)
T ss_dssp CSSSCEECCC----CCEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEEEEEEEECCSSEEEEEEEECSCCTTTCEE
T ss_pred cccccccccc----cceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCccccccceEEeccccceEEEEEcccccccCeE
Confidence 133444321 24678899999999999999999988 88 78877654332222222235789999999999999
Q ss_pred EEEEEEeCCCC-ceeEEEEEeeCCCCCCCCCeeeeecCCcEEEEeeCCCCCCCcccccEEEEeeeCCCCCeEEEceeeee
Q psy7042 647 YRVVAENDLGM-DSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGNTRFT 725 (2245)
Q Consensus 647 y~C~a~n~~g~-~~~~~~l~v~~~P~~p~~~~~~~~~~~si~lsW~~p~~~~~~~~~~y~v~~~~~~~~~w~~~~~~~~~ 725 (2245)
|+|.|.|..|. .+..+.|.|..+|.+|..+.+...+.+++.|+|.++..++++++..|.|+|+.. ...|.........
T Consensus 238 Y~c~A~n~~G~~~s~~~~l~V~~~P~~~~~p~~~~~~~~~v~l~w~~~~~~g~~~i~~Y~v~~~~~-~~~~~~~~~~~~~ 316 (731)
T 2v5y_A 238 YRCMIRTEGGVGISNYAELVVKEPPVPIAPPQLASVGATYLWIQLNANSINGDGPIVAREVEYCTA-SGSWNDRQPVDST 316 (731)
T ss_dssp EEEEEEETTEEEECCCEEEEEECCCCBSSCCEEEEECSSCEEEECCCSSBSSCSCCCEEEEEEEES-SSSCEEEEECCSS
T ss_pred EEEEEECCCCCcceeeEEEEEecCCCCCCCcceeccCCceEEEEeCCcccCCCCccEEEEEEEEEC-CCCceEEeccCcc
Confidence 99999999998 677888999999999999999999999999999988777778999999999875 4568766555567
Q ss_pred eEEEecCCCCCEEEEEEEEE--ecccCCCCCCCCccEEecCccccccccccccccCCCceeecccccccccCCceEEEEe
Q psy7042 726 TMAITGLSPGHQYEFRVYAE--NVYGRSDPSTTSDLITTKDTFKKQIKKRQYDFDETGKKIRGKADEKVSDYDQYVFDIY 803 (2245)
Q Consensus 726 ~~~i~~L~p~t~y~~~v~a~--n~~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 803 (2245)
.+.|.+|.|++.|.|+|.|. |..|.+.+|....+.+..
T Consensus 317 ~~~i~~L~p~t~Y~~~V~A~~~N~~G~s~~S~~~~~~t~~---------------------------------------- 356 (731)
T 2v5y_A 317 SYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTRTKC---------------------------------------- 356 (731)
T ss_dssp EEEECSCCTTCEEEEEEEEECSSTTCSCCBCCCEEEECCC----------------------------------------
T ss_pred eEEEeCCCCCCEEEEEEEEEecCCCccccCCCcEEeeecC----------------------------------------
Confidence 89999999999999999999 999998877632221110
Q ss_pred eeccCccccccccceecccccccccccCceeEEEEeeecccCCeeEEEeeccCCchhhhhhheeeeeeeccCCCceEeec
Q psy7042 804 SKYVPQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLH 883 (2245)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 883 (2245)
T Consensus 357 -------------------------------------------------------------------------------- 356 (731)
T 2v5y_A 357 -------------------------------------------------------------------------------- 356 (731)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCCcceEEEEEEecCCCCCcccEEeeeeCceEEEEecCCCCCC-CCccceEEEeeeecCCCceEE-----ecceeee
Q psy7042 884 DAFEDDDEMVLIFEVLDRPHPPENLHADEFAGDSLTLYWTPPRDNG-GSEITNYVVEKKDYNSTVWTK-----VSSYVTT 957 (2245)
Q Consensus 884 ~~~~~~~~~~~~~~~~~~P~~p~~l~~~~~~~~~~~l~W~~p~~~~-g~~i~~y~i~~~~~~~~~~~~-----~~~~~~~ 957 (2245)
..+|.+|.++.+...+.+++.|+|++|.... ...+.+|.|+|+......+.. +......
T Consensus 357 ---------------~~p~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~~~~~~y~v~y~~~~~~~~~~~~~~~~~~~~~~ 421 (731)
T 2v5y_A 357 ---------------ADPMRGPRKLEVVEVKSRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREEVSWDTENSH 421 (731)
T ss_dssp ---------------CCCSCCCEEEEEEEECSSCEEEEEECCCHHHHCSSSCEEEEEEEEESSSSEEEEEEEECCSSCSS
T ss_pred ---------------CCCCCCCceeEEEeccCCeEEEEEECCCcccccceeeeEEEEEEEccCCCCccceeEEEEecCCc
Confidence 1366889999999999999999999986432 236789999998765443321 2334567
Q ss_pred ceEEEecCCCCceeeEEEEEEeccccCCCccccCcccccCCCCCCCCCC--CCeeEeecCCeEEEEecCCCCCCCCccce
Q psy7042 958 PFVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPG--APKGVDSTEDSISLVWSKPRHDGGSPIQR 1035 (2245)
Q Consensus 958 ~~~~i~~L~p~~~y~~~v~a~n~~g~~~~s~~~~~~~~~t~~~~p~~p~--~~~~~~~~~~~v~l~W~~p~~~~~~~i~~ 1035 (2245)
..+.|.+|.|++.|.|+|.|.|..|.++ + ..+.+.|...+|.+|. .+.... .+++|.|+|++|...+| +|.+
T Consensus 422 ~~~~i~~L~p~t~Y~~~V~A~n~~G~s~-S---~~~~~~T~~~~P~~p~~~~~~~~~-~~~si~l~W~~P~~~~g-~i~~ 495 (731)
T 2v5y_A 422 PQHTITNLSPYTNVSVKLILMNPEGRKE-S---QELIVQTDEDLPGAVPTESIQGST-FEEKIFLQWREPTQTYG-VITL 495 (731)
T ss_dssp CEEEECSCCSSCEEEEEEEEECSSCEEE-C---CCEEEECCCCCCCCCCTTTCEEEE-ETTEEEEECCCCSCCSS-CCCE
T ss_pred ceEEECCCCCCCEEEEEEEEEcCCCCCC-C---ceEEEEccCCCCCCCCcceEEeee-cCCeEEEEEcCCCCCCC-Cccc
Confidence 7899999999999999999999999874 3 5778888899999765 444433 47899999999987665 6999
Q ss_pred EEEEEEecCCcc-ceeccccccCCcceeEEEEeecccccCCccCchhhhhhhhhcccccccccccCCcEEEEEEEEEecC
Q psy7042 1036 YIVEKRLISDDK-WIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAA 1114 (2245)
Q Consensus 1036 y~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~v~A~n~~ 1114 (2245)
|.|+|+..+... +... ... ...+. .++ ..+.++|.+|.|++.|.|+|+|.|..
T Consensus 496 Y~V~~~~~~~~~~~~~~-----~~~-~~~~~--~~~------------------~~~~~~i~~L~p~t~Y~~~V~A~n~~ 549 (731)
T 2v5y_A 496 YEITYKAVSSFDPEIDL-----SNQ-SGRVS--KLG------------------NETHFLFFGLYPGTTYSFTIRASTAK 549 (731)
T ss_dssp EEEEEEEEEECC---CC-----CCC-EEEEE--EET------------------TCCEEEECSCCTTEEEEEEEEEEETT
T ss_pred eEEEEEECcCCCccccc-----cCc-ceEEe--ecC------------------CcceEEecCCCCCCEEEEEEEEEeCC
Confidence 999998654321 1000 000 00000 000 00123699999999999999999999
Q ss_pred CCCCCC
Q psy7042 1115 GQGPWS 1120 (2245)
Q Consensus 1115 G~~~~s 1120 (2245)
|.|+++
T Consensus 550 G~g~~s 555 (731)
T 2v5y_A 550 GFGPPA 555 (731)
T ss_dssp EEEEEE
T ss_pred ccCCCc
Confidence 987655
No 13
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=100.00 E-value=1.3e-38 Score=400.13 Aligned_cols=399 Identities=12% Similarity=0.113 Sum_probs=245.7
Q ss_pred cCCcEEEEEEEEcCCCCCCCCC-ccccEEEe-------eccCCCCCceecCCcceEEeCCCeEEEEEEEeeecCCceEEE
Q psy7042 54 EGNDYEFRIIAVNAIGKSEPSI-CTTPVKIC-------EFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWL 125 (2245)
Q Consensus 54 ~~d~G~Y~C~a~n~~g~~~~~~-~~~~~~v~-------~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~ 125 (2245)
-+|.|.|+|...+..+...+.. .....++. -......+.++..+..+.|.+|+++.|.|.+.|.|.+.|.|+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~c~~~p~~~~~~~~~~~v~V~~G~~v~L~C~v~g~P~p~i~W~ 83 (423)
T 3qs7_E 4 NQDLPVIKCVLINHKNNDSSVGKSSSYPMVSESPEDLGCALRPQSSGTVYEAAAVEVDVSASITLQVLVDAPGNISCLWV 83 (423)
T ss_dssp ----------------------------------------------------CEEEECSSCCEEEEEECSCCSSCEEEEE
T ss_pred cCCCCeeEEEEEeccCCCccccccccchhhhCCHHHcCCccCCCCCcceeccccEEEecCCcEEEEEEEEcCCCCeEEEE
Confidence 4789999999887654432221 11111111 111112234555666899999999999999999999999999
Q ss_pred ECCeeccCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEEcCcccceeEEEEEecCCCeeecCCCceEEcCCCeEEEEE
Q psy7042 126 RNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKI 205 (2245)
Q Consensus 126 ~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~P~~~~~~~~~~v~~G~~~~l~C 205 (2245)
+++..+....++.. .......|.|.+++.+|+|.|+|.|.|..|..+..+.|.|..+|.+.. ..+..+..|+.+.|.|
T Consensus 84 ~~~~~l~~~~~~~~-~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~-~~p~~~~~~~~~~L~C 161 (423)
T 3qs7_E 84 FKHSSLNCQPHFDL-QNRGVVSMVILKMTETQAGEYLLFIQSEATNYTILFTVSIRNTLLYTL-RRPYFRKMENQDALVC 161 (423)
T ss_dssp ETTEEECCCCBC------CEEEEEESSCCSSSCSEEEEEEEC--CEEEEEEEEEEC-----CE-EEEEEEECSSSSCEEE
T ss_pred ECCCccCccceecc-ccceEEEEEEeecCcccCEEEEEEEEcCCCcEEEEEEEEEecCccccc-cCCcEeccCCceEEEE
Confidence 99988765333211 112334699999999999999999999999998899999998876631 2233456788899999
Q ss_pred EEecCCCceEEEeeCceeeecCCc---eEEEEeCCeEEEEEcccCccCceeEEEEEEcCCcceEE-EEEEEEecCCCCCC
Q psy7042 206 FYAGDQPMEVSLTKNGRVVQSDDR---FKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSG-TFTINITGLPGPPI 281 (2245)
Q Consensus 206 ~~~g~p~~~i~W~~~g~~l~~~~~---~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~-~~~l~V~~~p~~~~ 281 (2245)
.+.|.|.|.|+|+|++..+..... ..+.. ....| ..+|+|.|+|.|.|..|.... .+.|.|..+|..
T Consensus 162 ~a~G~P~P~i~W~k~~~~~~~~~~~~~~~~~~--~~~~l-----~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~~p~~-- 232 (423)
T 3qs7_E 162 ISESVPEPIVEWVLCDSQGESCKEESPAVVKK--EEKVL-----HELFGTDIRCCARNELGRECTRLFTIDLNQTPQT-- 232 (423)
T ss_dssp EEEESSCCEEEEEEC-------------CEEE--CCSEE-----CCCCSSCEEEEEECSSCEEEEECEEEESSSCCCS--
T ss_pred EEeeecCCeEEEEECCCCCccccccccccccc--cceEE-----ecccCeEEEEEEEcCCCCcceeeEEEEEecCCcc--
Confidence 999999999999999886532110 00111 10111 578999999999999887543 244443322110
Q ss_pred CCcccceeeccceEEEecCCCCCCCceeEEEEEEEEecCCCceEEeeeccCcceEEEcCCCCCCEEEEEEEEEecCCCCC
Q psy7042 282 GPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGP 361 (2245)
Q Consensus 282 ~~~~~~~~~~~s~~~~w~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~c~a~n~~g~~~ 361 (2245)
T Consensus 233 -------------------------------------------------------------------------------- 232 (423)
T 3qs7_E 233 -------------------------------------------------------------------------------- 232 (423)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCceecCCCCCCCCCCCCcEEEeecCCeeEEEecCCCCCCCCCccEEEEEeeecCCCCcEEEeeeecCCceeecCC
Q psy7042 362 PLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPN 441 (2245)
Q Consensus 362 ~~~~~~~~~~~~~~~~p~~~~~~~v~~~~~~~~~l~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 441 (2245)
T Consensus 233 -------------------------------------------------------------------------------- 232 (423)
T 3qs7_E 233 -------------------------------------------------------------------------------- 232 (423)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCceEEEEEEeecCCCCCCCCCCCCcEEecCCcccCCCceeccccccccccccceeeEEEEec-cCcCeEEEEeCCee
Q psy7042 442 LIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITG-CPKPTISWLKGSRE 520 (2245)
Q Consensus 442 l~~~~~g~y~c~a~n~~g~~~~s~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g-~p~~~v~W~~~~~~ 520 (2245)
.+.+..+.+|+.+.|.|.+.| .|.+.++|+|++..
T Consensus 233 --------------------------------------------~~~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k~g~~ 268 (423)
T 3qs7_E 233 --------------------------------------------TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKA 268 (423)
T ss_dssp --------------------------------------------STTEEEEETTSCEEEEEEEEESSSCCCEEEEESSSB
T ss_pred --------------------------------------------CCCceEEeCCCeEEEEEEEEcCCCCcEEEEEECCEE
Confidence 011344568999999999999 67799999999998
Q ss_pred cCCCccEEEE-eeC-----CeEEEEEecccccCCceEEEEEEeCCCCCCcceeEeEecCCCCCCCCCcccceEeeCCCeE
Q psy7042 521 ITPSARHHIF-AEG-----DTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENV 594 (2245)
Q Consensus 521 i~~~~~~~~~-~~~-----~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~~~p~~~~~~~~~~g~~~ 594 (2245)
+.....+... ..+ ....|.|.++..+|+|.|+|.|.|. ....+.|.|..+|.+...+.. ....+.+|+.+
T Consensus 269 l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~---~~~~~~L~V~~~p~i~~~~~~-~~~~v~~G~~v 344 (423)
T 3qs7_E 269 LEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTIVEKGFINATNSS-EDYEIDQYEEF 344 (423)
T ss_dssp CCGGGEEEEEEEETTTEEEEEEEEEESSCCTTTCEEEEEEETTE---EEEEEEEEEESSCEEEEC----CEECCCTTCCC
T ss_pred ccccceeecccccCCceeEEEEEEEEeecCHHHCEEEEEEEecC---CCceEEEEEEeCCcceEcCCC-ccEEecCCCeE
Confidence 7654332111 111 1237999999999999999999998 667789999988876544432 24557889999
Q ss_pred EEEEeeeecCCCeEEEEeCCeEeeccCeEEEEecCCeEEEEEcCCCCCcCEEEEEEEEeCCCCceeEEEEEeeCCCCCCC
Q psy7042 595 VVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQ 674 (2245)
Q Consensus 595 ~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~P~~p~ 674 (2245)
.|.|.+.|.|.|.|+|+|+|..+..+... ......+.+......|+|.|+|.|.|..|..+.++.|.|...|++|.
T Consensus 345 ~l~C~~~g~P~p~i~W~k~g~~l~~~~~~----~~~~~~~~~~~~~~~D~G~YtC~A~N~~G~~~~s~~L~v~~~p~~~~ 420 (423)
T 3qs7_E 345 CFSVRFKAYPQIRCTWTFSRKSFPCEQKG----LDNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRSGTKHHH 420 (423)
T ss_dssp CEEEEEEEESCCEEEEEETTEEEECBCCB----CSSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC---------
T ss_pred EEEEEEEEcCCCeEEEEECCEECCCcccc----ccCCcEEEEEecccccCEEEEEEEEcCCceEEEEEEEEEecCCcccc
Confidence 99999999999999999999988654310 00111222345677899999999999999999999999999998775
Q ss_pred C
Q psy7042 675 F 675 (2245)
Q Consensus 675 ~ 675 (2245)
.
T Consensus 421 ~ 421 (423)
T 3qs7_E 421 H 421 (423)
T ss_dssp -
T ss_pred c
Confidence 4
No 14
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=100.00 E-value=2.4e-36 Score=405.73 Aligned_cols=473 Identities=15% Similarity=0.168 Sum_probs=325.4
Q ss_pred cceeeEEecCCeEEEEeeeecCCCC---ceeEecCCcccc-------------CCCCcEEEee--ecceeEEEEccCCcC
Q psy7042 1428 GVRDITVKAGEDFSIHVPFMAFPQP---AAFWFANDSIID-------------DSDTRVHKQL--TMNSASLVVKNSQRS 1489 (2245)
Q Consensus 1428 ~~~~~~v~~g~~~~l~c~~~~~p~~---~~~W~~~~~~~~-------------~~~~~~~~~~--~~~~~~L~i~~~~~~ 1489 (2245)
.+.++.+.+|+.+.|.|.+.+.|.+ .+.|+|++.... ....|+.+.. .++...|.|.+++.+
T Consensus 6 ~P~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~ 85 (585)
T 2ocw_A 6 GPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQD 85 (585)
T ss_pred CcceeEEecCCcEEEEEeCCCCcCCCcccEEEEeCCCCCCceEEEECCCcccceeeceEEEEecCCCCEEEEEECCCCcc
Confidence 4557899999999999999998654 789999986321 1123544443 345578999999999
Q ss_pred CceEEEEEEEcCCcceeeEEEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccchhccccccCcccccCCeEEEE
Q psy7042 1490 DGGQYRLQLKNPAGFDTATLHSRLRTLPDSVNPRCHLPSSTSKERPKFPTHPNHQPWLKWARASLTSKGVDSTEDSISLV 1569 (2245)
Q Consensus 1490 d~G~Y~c~a~n~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1569 (2245)
|+|.|+|.|.|..|..+..+.|.|...|.... .+. ......++.+.|.
T Consensus 86 D~G~Y~C~~~n~~~~~~~~~~l~V~~~p~~~~------------------~~~--------------~~~v~~G~~v~l~ 133 (585)
T 2ocw_A 86 DSGRYKCGLGINSRGLSFDVSLEVSQGPGLLN------------------DTK--------------VYTVDLGRTVTIN 133 (585)
T ss_pred cCEEEEEEcccCCCCceEEEEEEEecCccccC------------------CCc--------------cEEEEcCCCEEEE
Confidence 99999999999988877788888877553210 000 0012234456666
Q ss_pred ecCCCCCCCCccceEEEEEEecCCccceEeeccccCCccceEEEEeecCccCCCCCCccceeeEeeeCCeeeEEecccee
Q psy7042 1570 WSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLEREVGGAIWLKCNDYNV 1649 (2245)
Q Consensus 1570 w~~p~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1649 (2245)
|..... .....+.||++|....................+..+..+....
T Consensus 134 C~~~~~-------------------------------~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 182 (585)
T 2ocw_A 134 CPFKTE-------------------------------NAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQ 182 (585)
T ss_pred EEecCC-------------------------------CCCccEEEEECCCCCceEEecCCcccCccccCcEEEEeccCCC
Confidence 653211 0113478999987532100000000000111222233323222
Q ss_pred eeceEEEeccCCCCeEEEEEEEEcCCCcCCCCCcCcceEEeeecCCCCCceeccCCceEEcCCCeEEEEEEecCcCC---
Q psy7042 1650 LECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPV--- 1726 (2245)
Q Consensus 1650 ~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~G~~v~L~C~~~~~p~--- 1726 (2245)
...+|.|.+++.+|.|.|+|.|.|..|...... .+.+. . .+ +..+.+.+|+.+.|.|.+ +.+.
T Consensus 183 ~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~---~l~V~--~--~~------p~~~~~~~G~~v~l~C~~-~~~~~~~ 248 (585)
T 2ocw_A 183 LLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNA---DLQVL--K--PE------PELVYEDLRGSVTFHCAL-GPEVANV 248 (585)
T ss_pred cEEEEEEccCChhHCeEEEEEeccCCccccceE---EEEEc--c--CC------CceeEEcCCCcEEEEEEc-CCCCCCc
Confidence 345899999999999999999999887644221 12221 1 12 344668899999999998 4443
Q ss_pred CeEEEe-eCCEe---cc---------CCceEEEEec--CcEEEEEEeeeccCCCeEEEEEEecCceeeE-----EEEEEE
Q psy7042 1727 PKCRWL-RNGRE---IS---------SGARYRVETA--GGVFRLHFNEVTDVDNGDYTCEAYNSVGFAH-----TSSRVK 1786 (2245)
Q Consensus 1727 ~~v~W~-~~~~~---l~---------~~~~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~~-----~~~~l~ 1786 (2245)
+.+.|+ ++|.. +. ...++.+... ++.++|.|.+++.+|+|.|+|.|.|. |... ..+.|.
T Consensus 249 ~~~~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~i~~v~~~d~G~Y~C~a~n~-g~~~~~~~~~~~~l~ 327 (585)
T 2ocw_A 249 AKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCGAHSD-GQLQEGSPIQAWQLF 327 (585)
T ss_pred eEEEEEeCCCCCcceEEeCCCcCCcccCCceEeeccCCCcEEEEEEccCChhhCEEEEEEEEcC-CCccccCceeeEEEE
Confidence 678896 88732 11 1344544432 45567999999999999999999995 4433 778999
Q ss_pred ecCCCccccCCCceEEcCCCeEEEEEEEeccCCcEE----EEEE--CCE--Eeec---------CCceEEEE--cCCeEE
Q psy7042 1787 IGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEV----SLTK--NGR--VVQS---------DDRFKFTV--LDDYII 1847 (2245)
Q Consensus 1787 V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~v----~W~~--~g~--~l~~---------~~~~~~~~--~~~~~~ 1847 (2245)
|..+|.+...+....+.+|+++.|.|.+.+.|.+.+ .|++ +|. .+.. ..++.+.. ..+...
T Consensus 328 V~~~p~~~~~~~~~~~~~G~~v~l~C~~~~~p~p~i~~w~~W~~~~~g~~~~l~~~~~~~~~~~~~r~~~~~~~~~g~~~ 407 (585)
T 2ocw_A 328 VNEESTIPRSPTVVKGVAGSSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFT 407 (585)
T ss_pred EecccccccCCcceEEEeCCcEEEEEecCCCCCccEEEEEEEEccCCCCCceeeeecceeecccCCCEEEeccCCCcEEE
Confidence 999999988888899999999999999999998877 7999 887 5532 22333332 123345
Q ss_pred EEEcccCcccceEEEEEEEcCCeeeEEEEEEEEeCCCCCCCCCceecccccceEEEEecCCCCCCCeeeeEEEEEEEcCC
Q psy7042 1848 IFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDIS 1927 (2245)
Q Consensus 1848 l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~ 1927 (2245)
|.|.++..+|+|.|+|.| |..|..+..+.|.|...|
T Consensus 408 L~I~~v~~~D~G~Y~C~a-n~~g~~~~~~~l~V~~~~------------------------------------------- 443 (585)
T 2ocw_A 408 VILNQLTSRDAGFYWCLT-NGDTLWRTTVEIKIIEGE------------------------------------------- 443 (585)
T ss_pred EEECCCChhhCEEEEEcc-cCCCccceeEEEEEecCc-------------------------------------------
Confidence 999999999999999999 887776666666654211
Q ss_pred CCceEEEeeecCcceEEecCCCCCCeEEEEEEEECCCCCCCCCCCcCceeccCCCCCCCCCCCcEEEEEcCCeEEEEEec
Q psy7042 1928 MPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDK 2007 (2245)
Q Consensus 1928 ~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~~~a~n~~g~~~~s~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~v~l~W~~ 2007 (2245)
T Consensus 444 -------------------------------------------------------------------------------- 443 (585)
T 2ocw_A 444 -------------------------------------------------------------------------------- 443 (585)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCCceeEEEEEEeeecCccceEEEEEEeccceEEeCCCcCCceEEEEEEEEeccccCCCcCCCCcccccCcccCCC
Q psy7042 2008 PLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKA 2087 (2245)
Q Consensus 2008 p~~~~~~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~s~~v~~~~~~~~~~ 2087 (2245)
T Consensus 444 -------------------------------------------------------------------------------- 443 (585)
T 2ocw_A 444 -------------------------------------------------------------------------------- 443 (585)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceEEeeccceeeecCccEEEEEEEE----eeCCCeEEEeeCCEeeCCCCc------E-EEEEeCcEEEEEEcCCCCCCCe
Q psy7042 2088 PEIIVPLRNANAIQNHNAQFQCTIT----GCPKPTISWLKGSREITPSAR------H-HIFAEGDTYTLIINSVYGVDAD 2156 (2245)
Q Consensus 2088 p~~~~~~~~~~~~~g~~v~l~C~~~----g~P~p~i~W~~~g~~l~~~~~------~-~~~~~~~~~~L~i~~v~~~d~G 2156 (2245)
|.+.. +.+..+.+|+.++|.|.+. |.|.|.|.|+|||..+..... + .+..++....|+|.++..+|+|
T Consensus 444 p~~~~-~~~~~v~~G~~v~L~C~~~~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G 522 (585)
T 2ocw_A 444 PNLKV-PGNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEG 522 (585)
T ss_pred ccccc-CCceeEecCCcEEEEEEecCCCCCCccEEEEEeecCceeeeccCCCCCcceEEecCcccEEEEEECCCCcccCe
Confidence 00100 1234577899999999997 789999999999988754321 2 2222455578999999999999
Q ss_pred EEEEEEEeCCceeeEE-EEEEEEcCCCC
Q psy7042 2157 EYVCRAVNKGGVKSTK-AELIIMTAPKF 2183 (2245)
Q Consensus 2157 ~Y~C~a~N~~G~~~~~-~~l~V~~~p~~ 2183 (2245)
.|+|.|.|.+|...+. +.|.|..+|+.
T Consensus 523 ~Y~C~a~N~~G~~~~~~~~l~V~~~p~~ 550 (585)
T 2ocw_A 523 WYWCGVKQGHFYGETAAVYVAVEERKAA 550 (585)
T ss_pred EEEEEeEeCCCccEEEEEEEEEEeeeec
Confidence 9999999999987655 99999988743
No 15
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=100.00 E-value=1.4e-37 Score=390.68 Aligned_cols=371 Identities=23% Similarity=0.367 Sum_probs=279.8
Q ss_pred CCCCceecCCcceEE---eCCCeEEEEEEEeeecCCceEEEECCeeccCCCeEEEEEcCcEEEEEEeee-ccCCCeEEEE
Q psy7042 88 GEKPDFIVPLKDLVV---PLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEV-TDVDNGDYTC 163 (2245)
Q Consensus 88 ~~~P~~~~~~~~~~v---~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~-~~~d~G~Y~C 163 (2245)
+.+|.|+..|.+..+ .+|+.+.|.|.+.|+|.|+|.|+|||..+..+..+.+...++. |.|.+. +.+|+|.|+|
T Consensus 3 ~~~P~f~~~P~~~~~~~~~eg~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~g~--l~i~~~~~~~D~G~Y~C 80 (384)
T 3kld_A 3 GSGPVFVQEPSHVMFPLDSEEKKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVDGS--LLINNPNKTQDAGTYQC 80 (384)
T ss_dssp CEEEEEEECCCCEEEETTCSCSEEEECCEEEEESCCEEEEEETTEECCC----CEEEETTE--EEEESCCHHHHCEEEEE
T ss_pred CCCCEEEeCCcceEeecCCCCCeEEEEeEecCCCCCEEEEEECCEECcCCCCccEEEECCE--EEEcCCCCcccCEEEEE
Confidence 357889988888776 6899999999999999999999999999986544444444553 666665 8899999999
Q ss_pred EEEcCccccee-EEEEEecCCCeeec-CCCceEEcCCCeEEEEEEEe-cCCCceEEEeeCceeeecCCceEEEEeCCeEE
Q psy7042 164 EAYNSVGFAHT-SSRVKIGTPPRIDR-MPNALYIPEGDNTKVKIFYA-GDQPMEVSLTKNGRVVQSDDRFKFTVLDDYII 240 (2245)
Q Consensus 164 ~a~n~~g~~~~-~~~l~V~~~P~~~~-~~~~~~v~~G~~~~l~C~~~-g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~ 240 (2245)
.|.|..|...+ .+.|.|...+.+.. .+..+.+.+|+.+.|.|.+. +.|.+.+.|++++..+....+..+. .....
T Consensus 81 ~A~N~~G~~~s~~~~l~v~~~~~~~~~~~~~~~v~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~--~~~~~ 158 (384)
T 3kld_A 81 IATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSYQDNRRFVS--QETGN 158 (384)
T ss_dssp EEEETTEEEECCCEEEEEEEECCCSCCCCCCEEEEETCCEEECCCCCSEESCEEEEEEETTEECCCSSSEEEC--TTTCC
T ss_pred EEEcCcccEEecceEEEEecccccccCCCCceeEEcCCCeEEecCCCCCCCCeEEEEEECCCCCEeeccEEEE--cCCCc
Confidence 99999997644 66777766555443 34568899999999999864 5677899999999987655443322 22346
Q ss_pred EEEcccCccCceeEEEEEEcCCcceEEEEEEEEecCCCCCCCCcccceeeccceEEEecCCCCCCCceeEEEEEEEEecC
Q psy7042 241 IFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDIS 320 (2245)
Q Consensus 241 L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~s~~~~w~pp~~~~~~~~~~~~~~~~~~~ 320 (2245)
|.|.++..+|+|.|+|.|.|..+.... ...+.+
T Consensus 159 L~I~~v~~~D~G~Y~C~a~n~~~~~~~------~~~~~~----------------------------------------- 191 (384)
T 3kld_A 159 LYIAKVEKSDVGNYTCVVTNTVTNHKV------LGPPTP----------------------------------------- 191 (384)
T ss_dssp EEESSCCGGGCEEEEEEEEETTTTEEE------ECCCEE-----------------------------------------
T ss_pred EEEeecCHHHCceEEEEEeccccccee------eCCceE-----------------------------------------
Confidence 999999999999999999998765321 100000
Q ss_pred CCceEEeeeccCcceEEEcCCCCCCEEEEEEEEEecCCCCCCCCCCCceecCCCCCCCCCCCCcEEEeecCCeeEEEecC
Q psy7042 321 MPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDK 400 (2245)
Q Consensus 321 ~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~c~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~v~~~~~~~~~l~W~~ 400 (2245)
+. +...
T Consensus 192 ---------------~~-------------v~~~---------------------------------------------- 197 (384)
T 3kld_A 192 ---------------LI-------------LRND---------------------------------------------- 197 (384)
T ss_dssp ---------------EE-------------EEEE----------------------------------------------
T ss_pred ---------------EE-------------EccC----------------------------------------------
Confidence 00 0000
Q ss_pred CCCCCCCCccEEEEEeeecCCCCcEEEeeeecCCceeecCCcccCceEEEEEEeecCCCCCCCCCCCCcEEecCCcccCC
Q psy7042 401 PLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKA 480 (2245)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~s~~~~~v~~~~~~~~~~ 480 (2245)
.. . ...+
T Consensus 198 -----------------~~--------------------------------------~------------------~~~~ 204 (384)
T 3kld_A 198 -----------------GV--------------------------------------M------------------GEYE 204 (384)
T ss_dssp -----------------EE--------------------------------------C------------------CCEE
T ss_pred -----------------Cc--------------------------------------c------------------cccC
Confidence 00 0 0000
Q ss_pred Cce-eccccccccccccceeeEEEEeccCcCeEEEEeCC-eecCCCccEEEEeeCCeEEEEEecccccCCceEEEEEEeC
Q psy7042 481 PEI-IVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGS-REITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNK 558 (2245)
Q Consensus 481 p~~-~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~-~~i~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~ 558 (2245)
|.+ ...+....+.+|+++.|.|.+.|.|.+.+.|+|++ ..+.... ..... ...|.|.+++.+|+|.|+|.|.|.
T Consensus 205 p~~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~~--~~~~~--~~~L~I~~v~~~D~G~Y~C~a~N~ 280 (384)
T 3kld_A 205 PKIEVQFPETVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARKA--RRHKS--NGILEIPNFQQEDAGSYECVAENS 280 (384)
T ss_dssp EEEEEECCSEEEEETTSCEEEEEEEEEESCCEEEEEETTCCCCCTTC--EECTT--SCEEEECSCCGGGCEEEEEEEEET
T ss_pred CceeecCCCceEecCCCcEEEEEEEeecCCCcEEEEeCCCccccccc--eecCC--CcEEEECCCChhhCEEEEEEEEcC
Confidence 111 11223455678999999999999999999999954 4444322 12112 238999999999999999999999
Q ss_pred CCCCCcceeEeEecCCCCCCCCCcccceEeeCCCeEEEEEeeeecCCCeEEEEeCCeEeeccCeEEEEecCCeEEEEEcC
Q psy7042 559 GGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRD 638 (2245)
Q Consensus 559 ~g~~~~~~~l~v~~~p~~~~~p~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 638 (2245)
.|.....+.|.|..+|.+...+ ....+..|+.+.|.|.+.|.|.|.|+|+|+|..+....++.+.. ..|.|.+
T Consensus 281 ~G~~~~~~~l~v~~~P~~~~~~---~~~~v~~g~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~----~~L~i~~ 353 (384)
T 3kld_A 281 RGKNVAKGQLTFYAQPNWVQII---NDIHVAMEESVFWECKANGRPKPTYRWLKNGDPLLTRDRIQIEQ----GTLNITI 353 (384)
T ss_dssp TEEEEEEEEEEEEEEEEEEECC---CCEEECTTCCEEEECEEEEESCCEEEEEETTEECCCBTTEEEET----TEEEESS
T ss_pred CCeEEEEEEEEEecCCccccCC---CceEecCCCCEEEEeECCccCCCeEEEEECCEECCCCccEEEeC----CEEEEee
Confidence 9999999999999888765443 34568889999999999999999999999999998777776532 4899999
Q ss_pred CCCCcCEEEEEEEEeCCCCceeEEEEEee
Q psy7042 639 ASNVDTAPYRVVAENDLGMDSAIVKIQIS 667 (2245)
Q Consensus 639 ~~~~d~g~y~C~a~n~~g~~~~~~~l~v~ 667 (2245)
+..+|+|.|+|.|.|.+|...+.+.|.|.
T Consensus 354 v~~~D~G~Y~C~A~N~~G~~~~~a~L~V~ 382 (384)
T 3kld_A 354 VNLSDAGMYQCVAENKHGVIFSSAELSVI 382 (384)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred cChhhCEEEEEEEEeCCceEEeceEEEEe
Confidence 99999999999999999999999999885
No 16
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=100.00 E-value=2.9e-36 Score=389.01 Aligned_cols=348 Identities=17% Similarity=0.218 Sum_probs=235.5
Q ss_pred eeEEecCCeEEEEeeeecCCCCceeEecCCccccCCCCcEEEeeecceeEEEEccCCcCCceEEEEEEEcCCcceeeEEE
Q psy7042 1431 DITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLH 1510 (2245)
Q Consensus 1431 ~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~c~a~n~~g~~~~~~~ 1510 (2245)
.++|.+|++++|.|.+.+.|...+.|++++..+.... .+.. ......+|.|.+++.+|+|.|+|.|.|..|.....+.
T Consensus 57 ~~~v~~g~~~~L~c~~~~~~~~~~~W~~~~~~l~~~~-~~~~-~~r~~~SL~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~ 134 (527)
T 3qs9_E 57 AVEVDVSASITLQVLVDAPGNISCLWVFKHSSLNCQP-HFDL-QNRGVVSMVILKMTETQAGEYLLFIQSEATNYTILFT 134 (527)
T ss_dssp EEEECSSCCEEEEEECSCCSSCEEEEEETTEEECCCC-BC------CEEEEEESSCCSSSCSEEEEEEEC--CEEEEEEE
T ss_pred eEEEeccccEEEEEEEecCCceeEEEEecCCccCccc-ccCC-CcceEEEEEECcCChhhCeeEEEEEEeccccEEEEEE
Confidence 6999999999999999999999999999988765322 2211 1123356999999999999999999999887666655
Q ss_pred EEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccchhccccccCcccccCCeEEEEecCCCCCCCCccceEEEEEEe
Q psy7042 1511 SRLRTLPDSVNPRCHLPSSTSKERPKFPTHPNHQPWLKWARASLTSKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRL 1590 (2245)
Q Consensus 1511 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~w~~p~~~~~~~i~~~~~~~~~ 1590 (2245)
+.|. +..... +. .+. ...
T Consensus 135 v~v~--~~~~~~------------------~~-~p~-----------------------------------------~~~ 152 (527)
T 3qs9_E 135 VSIR--NTLLYT------------------LR-RPY-----------------------------------------FRK 152 (527)
T ss_dssp EEEC-------C------------------EE-EEE-----------------------------------------EEE
T ss_pred EEEC--Cceeec------------------cC-CCc-----------------------------------------EEe
Confidence 5554 111000 00 000 000
Q ss_pred cCCccceEeeccccCCccceEEEEeecCccCCCCCCccceeeEeeeCCeeeEEeccceeeeceEEEeccCCCCeEEEEEE
Q psy7042 1591 ISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRII 1670 (2245)
Q Consensus 1591 ~~~~~~~~~~~~~~~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~ 1670 (2245)
.+....+.|...+.|. +.+.|++++.++........ .........+++.|.|.|+|.
T Consensus 153 ~~~~~~L~C~a~G~P~---P~i~W~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~d~G~Y~C~ 209 (527)
T 3qs9_E 153 MENQDALVCISESVPE---PIVEWVLCDSQGESCKEESP--------------------AVVKKEEKVLHELFGTDIRCC 209 (527)
T ss_dssp CSSSSCEEEEEEESSC---CEEEEEEC---------------------------------CEEECCSEECCCCSSCEEEE
T ss_pred cCCceEEEEEEceecC---CeEEEEECCCCCccccccCC--------------------cEEEEeeeeccccCCEEEEEE
Confidence 1111122333333332 46899999887642110000 000222334558899999999
Q ss_pred EEcCCCcCCCCCcCcceEEeeecCCCCCceeccCCceEEcCCCeEEEEEEec-CcCCCeEEEeeCCEeccCCceEEEEe-
Q psy7042 1671 AVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEAT-GTPVPKCRWLRNGREISSGARYRVET- 1748 (2245)
Q Consensus 1671 a~n~~g~~~~~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~G~~v~L~C~~~-~~p~~~v~W~~~~~~l~~~~~~~~~~- 1748 (2245)
|.|..|..... .+.+.. ..+|.+ ++.+..+.+|+++.|.|.+. +.|.+.+.|++++..+.....+....
T Consensus 210 A~N~~G~~~~~----~~~l~V---~~~p~~--~p~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k~g~~l~~~~~~~~~~~ 280 (527)
T 3qs9_E 210 ARNELGRECTR----LFTIDL---NQTPQT--TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTY 280 (527)
T ss_dssp EECSSCEEEEE----CEEEES---SSCCCC--SCCEEEECTTSCEEEEEEEEESSSCCCEEEECSSSCCCGGGEEEEEEE
T ss_pred EEeCCCcccce----EEEEEE---eccCcc--CCCceEEeCCCeEEEEEEEccCCCCeEEEEEECCEECCCCceeeeeee
Confidence 99998875421 122221 234444 45678899999999999996 89999999999999886654432211
Q ss_pred -c----CcEEEEEEeeeccCCCeEEEEEEecCceeeEEEEEEEecCCCccccCC--CceEEcCCCeEEEEEEEeccCCcE
Q psy7042 1749 -A----GGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMP--NALYIPEGDNTKVKIFYAGDQPME 1821 (2245)
Q Consensus 1749 -~----~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~l~V~~~p~~~~~~--~~~~~~~g~~~~l~C~~~~~p~~~ 1821 (2245)
. ....+|.|.+++.+|+|.|+|.|.|. ...++.|.|..+|.+...+ ....+.+|+.+.|.|.+.|.|.|.
T Consensus 281 ~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~---~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~ 357 (527)
T 3qs9_E 281 STNRTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIR 357 (527)
T ss_dssp ETTTEEEEEEEEEESSCCGGGCEEEEEEETTE---EEEEEEEEEC--CEEECCCSCCEECCCTTCCCCEEEEEEEESCCE
T ss_pred ccCcceeeEEEEEEccCCcccCeEEEEEEEeC---CCceEEEEEEccCccccccCcccEEEcCCCeEEEEEEEEecCCCE
Confidence 1 12345999999999999999999997 6778899999888766544 346678899999999999999999
Q ss_pred EEEEECCEEeecCCceEEEEcCCeEEEEEcccCcccceEEEEEEEcCCeeeEEEEEEEEe
Q psy7042 1822 VSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINIT 1881 (2245)
Q Consensus 1822 v~W~~~g~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 1881 (2245)
|+|+|+|+.+....++. .....|.|.++..+|+|.|+|.|.|..|.....+.|.|.
T Consensus 358 i~W~k~g~~l~~~~~~~----~~~~~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L~V~ 413 (527)
T 3qs9_E 358 CTWTFSRKSFPCEQKGL----DNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIR 413 (527)
T ss_dssp EEEEETTEEEECBCCBC----SSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC--
T ss_pred EEEEECCEECcCCcccc----cCCcEEEEecCCcccCEEEEEEEEeCCCcEEEEEEEEEe
Confidence 99999999997655421 234579999999999999999999999988877777664
No 17
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=100.00 E-value=5.1e-36 Score=379.94 Aligned_cols=366 Identities=25% Similarity=0.382 Sum_probs=303.9
Q ss_pred CceeccccccccccccceeeEEEEeccCcCeEEEEeC--CeecCC-----CccEEEEeeCCeEEEEEecccccCCceEEE
Q psy7042 481 PEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKG--SREITP-----SARHHIFAEGDTYTLIINSVYGVDADEYVC 553 (2245)
Q Consensus 481 p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~--~~~i~~-----~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 553 (2245)
|.|.. +.+..+.+|+++.|.|.+.|.|.+.+.|+|+ |..+.. +.++.+........|.|.++..+|+|.|+|
T Consensus 2 P~i~~-~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C 80 (389)
T 2jll_A 2 PHIIQ-LKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDC 80 (389)
T ss_dssp CEEEE-CCCEEEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEEEE
T ss_pred CeEEe-cCceEEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEEEE
Confidence 55555 5677888999999999999999999999999 888765 466777666667799999999999999999
Q ss_pred EEEeCCCCCCcceeEeEecCCCCCCCCCcccceEeeCCCeEEEEEeeeecCCCeEEEEeCCeEeeccC--eEEEEecCCe
Q psy7042 554 RAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGG--HFHVETSERH 631 (2245)
Q Consensus 554 ~a~n~~g~~~~~~~l~v~~~p~~~~~p~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~~~~~~~~~--~~~~~~~~~~ 631 (2245)
.|.|..|..+..+.|.|..+|.+...+. ...+..|+.+.|.|.+.|.|.+.++|++++..+.... ++.+...+..
T Consensus 81 ~a~n~~g~~~~~~~l~V~~~P~~~~~~~---~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~ 157 (389)
T 2jll_A 81 EAASRIGGHQKSMYLDIEYAPKFISNQT---IYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRK 157 (389)
T ss_dssp EEECSSCEEEEEEEEEEEEEEEECCSCC---EEEECTTCCEEEEECEEEESCCEEEEEETTEESSCTTCTTEEEEECSSC
T ss_pred EEEeCCCCcceEEEEEEEeCCEEecCcc---eEEeccCCEEEEEEEEEecCCCeEEEEECCccCCcccCceEEEeccCCE
Confidence 9999999998999999999988765442 3457889999999999999999999999999887553 6666666777
Q ss_pred EEEEEcCCCCCcCEEEEEEEEeCCCCceeEEEEEeeCCCCCCCCCeeeeecCCcEEEEeeCCCCCCCcccccEEEEeeeC
Q psy7042 632 AILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREH 711 (2245)
Q Consensus 632 ~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~P~~p~~~~~~~~~~~si~lsW~~p~~~~~~~~~~y~v~~~~~ 711 (2245)
..|.|.++...|.|.|+|.|.|..|.....+.+.+..+|.+|..+.+.....+++.|+|.+|..+++.++..|.++++..
T Consensus 158 ~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~P~~~~~~~~~~~~~~l~w~~p~~~~g~pi~~y~v~~~~~ 237 (389)
T 2jll_A 158 MILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALADVPSSPYGVKIIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEV 237 (389)
T ss_dssp EEEEECCCSTTSSEEEEEEEEETTEEEEEEEEEEECCCCCCCEEEEEEEECSSCEEEEEECCSCCTTSCEEEEEEEEEET
T ss_pred EEEEECCCChhhCEEEEEEEEcCCCcEEEEEEEEecCCCCCCcceEEeeccCCEEEEEEeCCCCCCCcceEEEEEEEEEC
Confidence 89999999999999999999999999999999999999999988888899999999999988778888999999999998
Q ss_pred CCCCeEEEce-eeeeeEEEecCCCCCEEEEEEEEEecccCCCCCCCCccEEecCccccccccccccccCCCceeeccccc
Q psy7042 712 PMSSWIRVGN-TRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDTFKKQIKKRQYDFDETGKKIRGKADE 790 (2245)
Q Consensus 712 ~~~~w~~~~~-~~~~~~~i~~L~p~t~y~~~v~a~n~~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 790 (2245)
....|..... .....+.|.+|.+++.|.|+|.|.|..|.+.++....+.+.+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s~~~~~~t~~~-------------------------- 291 (389)
T 2jll_A 238 ASEIWKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPV-------------------------- 291 (389)
T ss_dssp TCSCCEEEECSTTCSEEEECSCCTTCEEEEEEEEEESSCBCCCCCCEEEECCCC--------------------------
T ss_pred CCcccEEeeccCCcceEEECCccCCCEEEEEEEEEcCCccCCCCcceEEEecCC--------------------------
Confidence 8888876543 2346799999999999999999999999988776432221110
Q ss_pred ccccCCceEEEEeeeccCccccccccceecccccccccccCceeEEEEeeecccCCeeEEEeeccCCchhhhhhheeeee
Q psy7042 791 KVSDYDQYVFDIYSKYVPQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDI 870 (2245)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 870 (2245)
T Consensus 292 -------------------------------------------------------------------------------- 291 (389)
T 2jll_A 292 -------------------------------------------------------------------------------- 291 (389)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeccCCCceEeecccccCCcceEEEEEEecCCCCCcccEEeeeeCceEEEEecCCCCCCCCccceEEEeeeecCCCceEE
Q psy7042 871 MNQLHHPKLINLHDAFEDDDEMVLIFEVLDRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTK 950 (2245)
Q Consensus 871 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~p~~l~~~~~~~~~~~l~W~~p~~~~g~~i~~y~i~~~~~~~~~~~~ 950 (2245)
.+|.+|. +.....+.+++.|+|.+|.+.+ +++.+|.|+|+......|..
T Consensus 292 -----------------------------~~p~~p~-~~~~~~~~~~v~l~W~~p~~~~-~~i~~Y~v~~~~~~~~~~~~ 340 (389)
T 2jll_A 292 -----------------------------REPSPPS-IHGQPSSGKSFKLSITKQDDGG-APILEYIVKYRSKDKEDQWL 340 (389)
T ss_dssp -----------------------------CCCCCCC-EEEEEETTTEEEEEECCCCCCS-SCCCEEEEEEEC-----CCB
T ss_pred -----------------------------CCCCCCc-cccccCcCCEEEEEEECCCCCC-CcccEEEEEEEeCCCCccee
Confidence 2566664 6666678999999999987644 59999999999866666653
Q ss_pred -ecceeeeceEEEecCCCCceeeEEEEEEeccccCCCc
Q psy7042 951 -VSSYVTTPFVRVRNLAIGSTYEFRVMAENQYGLSKPA 987 (2245)
Q Consensus 951 -~~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~s 987 (2245)
.........+.|.+|.|++.|.|+|+|.|..|.|+++
T Consensus 341 ~~~~~~~~~~~~i~~L~~~t~Y~~~V~A~n~~G~s~~s 378 (389)
T 2jll_A 341 EKKVQGNKDHIILEHLQWTMGYEVQITAANRLGYSEPT 378 (389)
T ss_dssp CCEECTTCCEEEECSCCTTCEEEEEEEEEC-CCBCCCE
T ss_pred EeeccCCcceEEeCCcCCCCEEEEEEEEEcCCcCCCce
Confidence 2233456789999999999999999999999998887
No 18
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=100.00 E-value=5.7e-37 Score=391.16 Aligned_cols=374 Identities=22% Similarity=0.358 Sum_probs=297.1
Q ss_pred CCCCceecCCcceEEeCCCeEEEEEEEee-ecCCceEEEECCeeccCC--CeEEEEEcCcEEEEEEeee-----ccCCCe
Q psy7042 88 GEKPDFIVPLKDLVVPLGKLLTLQCEATG-TPVPKCRWLRNGREISSG--ARYRVETAGGVFRLHFNEV-----TDVDNG 159 (2245)
Q Consensus 88 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~g-~p~~~i~W~~~g~~l~~~--~~~~~~~~~~~~~L~i~~~-----~~~d~G 159 (2245)
.....|...|.++.+.+|+.++|.|.+.+ .|.+.|.|+|+|..+... .++....++. |.|.++ +.+|+|
T Consensus 19 ~~~~~~~~~P~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~---l~i~~~~~~~~~~~D~G 95 (403)
T 3laf_A 19 RRSLHFVSEPSDAVTMRGGNVLLNCSAESDRGVPVIKWKKDGLILALGMDDRKQQLPNGS---LLIQNILHSRHHKPDEG 95 (403)
T ss_dssp CCSSEEEECCCCEEECTTCCEEECCEEECTTCCCEEEEEETTEECCTTSCTTEEECTTSC---EEECSCCCBTTBCSSCE
T ss_pred ceeEEEEeCCCceEEecCCcEEEEEEcCCCCCCceEEEEECCEECccCCcccEEEecCCc---EEEeeeeccCCCCCcce
Confidence 45677888999999999999999999987 678899999999998743 3555544443 777777 778999
Q ss_pred EEEEEEEcCcccc--eeEEEEEecCCCeeecCCCceEEcCCCeEEEEEEEecCCCceEEEeeCceeeecCCceEEEEeCC
Q psy7042 160 DYTCEAYNSVGFA--HTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDD 237 (2245)
Q Consensus 160 ~Y~C~a~n~~g~~--~~~~~l~V~~~P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~ 237 (2245)
.|+|.|.|..+.. +..+.|.|..+|.+...+....+.+|+.+.|.|.+.|.|.+.++|+|+|..+.............
T Consensus 96 ~Y~C~~~~~~~~~~~s~~~~l~v~~p~~~~~~~~~~~~~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~ 175 (403)
T 3laf_A 96 LYQCEASLGDSGSIISRTAKVMVAGPLRFLSQTESITAFMGDTVLLKCEVIGDPMPTIHWQKNQQDLNPIPGDSRVVVLP 175 (403)
T ss_dssp EEEEEEECGGGCEEECCCEEEEECCCCEECSCCCCEEEETTSCEEECCCEECSSCCEEEEEESSSBCCCCTTCCSEEECT
T ss_pred EEEEEEEeCCCccEEEEEEEEEecCCCccccCCCcEEEEcCCeEEEEEEEcccCCCeEEEEECCEeccccCCceEEEEcC
Confidence 9999999754332 34678999999999989999999999999999999999999999999999885322211111122
Q ss_pred eEEEEEcccCccCceeEEEEEEcCCcce-EEEEEEEEecCCCCCCCCcccceeeccceEEEecCCCCCCCceeEEEEEEE
Q psy7042 238 YIIIFIKEIRKEDAGDYTVNLSNSSGSV-SGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVER 316 (2245)
Q Consensus 238 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~p~~~~~~~~~~~~~~~s~~~~w~pp~~~~~~~~~~~~~~~ 316 (2245)
...|.|.++..+|+|.|+|.|.|..|.. +..+.|.|...|..+.
T Consensus 176 ~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~l~v~~~p~~~~----------------------------------- 220 (403)
T 3laf_A 176 SGALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLHR----------------------------------- 220 (403)
T ss_dssp TSCEEECSCCGGGCEEEEEEEECSSCCCBCCCEEEEEECCCCCCE-----------------------------------
T ss_pred CceEEEcccccccCEEEEEEEEcCCCceeccceeEEEecCCCccc-----------------------------------
Confidence 2369999999999999999999987653 3455565554332110
Q ss_pred EecCCCceEEeeeccCcceEEEcCCCCCCEEEEEEEEEecCCCCCCCCCCCceecCCCCCCCCCCCCcEEEeecCCeeEE
Q psy7042 317 RDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNL 396 (2245)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~c~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~v~~~~~~~~~l 396 (2245)
T Consensus 221 -------------------------------------------------------------------------------- 220 (403)
T 3laf_A 221 -------------------------------------------------------------------------------- 220 (403)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EecCCCCCCCCCccEEEEEeeecCCCCcEEEeeeecCCceeecCCcccCceEEEEEEeecCCCCCCCCCCCCcEEecCCc
Q psy7042 397 SWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPM 476 (2245)
Q Consensus 397 ~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~s~~~~~v~~~~~~ 476 (2245)
T Consensus 221 -------------------------------------------------------------------------------- 220 (403)
T 3laf_A 221 -------------------------------------------------------------------------------- 220 (403)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCceeccccccccccccceeeEEEEeccCcCeEEEEeCCeecCCCccEEEEeeCCeEEEEEecccccCCceEEEEEE
Q psy7042 477 AAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAV 556 (2245)
Q Consensus 477 ~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 556 (2245)
++.+...+.+..+.+|+.+.|.|.+.+.|.+.+.|++++..+...........+. .|.|.++..+|+|.|+|.|.
T Consensus 221 ---~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~a~ 295 (403)
T 3laf_A 221 ---QLYFLQRPSNVIAIEGKDAVLECCVSGYPPPSFTWLRGEEVIQLRSKKYSLLGGS--NLLISNVTDDDSGTYTCVVT 295 (403)
T ss_dssp ---EEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCSSSSEEEETTT--EEEECSCCGGGCEEEEEEEE
T ss_pred ---CceEecCCCceEecCCCcEEEEEEcCCCCCCeEEEEECCeeccCCCceEEECCcc--EEEEeCCCHHHCEEEEEEEE
Confidence 0111122234556789999999999999999999999999887654433333333 79999999999999999999
Q ss_pred eCCCCCCcceeEeEecCCCCCCCCCcccceEeeCCCeEEEEEeeeecCCCeEEEEeCCeEeeccCeEEEEecCCeEEEEE
Q psy7042 557 NKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTI 636 (2245)
Q Consensus 557 n~~g~~~~~~~l~v~~~p~~~~~p~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~l~i 636 (2245)
|..|.....+.|.|..+|.+...+. ...+..|+.++|.|.+.|.|.+.++|+++|..+....++.+.. ...|.|
T Consensus 296 n~~g~~~~~~~l~V~~~p~~~~~~~---~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~---~~~L~i 369 (403)
T 3laf_A 296 YKNENISASAELTVLVPPWFLNHPS---NLYAYESMDIEFECAVSGKPVPTVNWMKNGDVVIPSDYFQIVG---GSNLRI 369 (403)
T ss_dssp ETTEEEEEEEEEEEEEEEEEEECCC---CEECCTTCCEEECCEEEEESCCEEEEEETTEECCCSSSEEEET---TTEEEE
T ss_pred cCCCceEEEEEEEEECCCcEeecCc---ceEEecCCeEEEEEEEeeccCCEEEEEECCEECCCCCcEEEec---CccEEE
Confidence 9999999999999998887765543 3557889999999999999999999999999988777766543 357999
Q ss_pred cCCCCCcCEEEEEEEEeCCCCceeEEEEEeeCCC
Q psy7042 637 RDASNVDTAPYRVVAENDLGMDSAIVKIQISDRP 670 (2245)
Q Consensus 637 ~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~P 670 (2245)
.++...|.|.|+|.|.|..|..+..+.|.|..||
T Consensus 370 ~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~P~ 403 (403)
T 3laf_A 370 LGVVKSDEGFYQCVAENEAGNAQSSAQLIVPKPA 403 (403)
T ss_dssp SSCCGGGCEEEEEEEEETTEEEEEEEEEECCCC-
T ss_pred eccccccCEEEEEEEEcCCceEEEEEEEEEeCCC
Confidence 9999999999999999999999999999998765
No 19
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=100.00 E-value=3e-37 Score=399.10 Aligned_cols=426 Identities=12% Similarity=0.142 Sum_probs=296.3
Q ss_pred eecCCcceEEeCCCeEEEEEEEeeecCCce-----EEEECCeeccCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEEc
Q psy7042 93 FIVPLKDLVVPLGKLLTLQCEATGTPVPKC-----RWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYN 167 (2245)
Q Consensus 93 ~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i-----~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 167 (2245)
|...|.+..+.+|+.++|.|.+.| |.|.+ .|+|++..+... ....|.|.+++. |+| |+|.|.+
T Consensus 2 i~~~P~~~~v~~G~~v~L~C~~~g-p~p~~~~~~~~w~k~~~~~~~~---------~~~~l~i~~v~~-d~g-Y~C~a~~ 69 (450)
T 1z7z_I 2 TSVSPSKVILPRGGSVLVTCSTSC-DQPMLLGIETPLPKKELLLPGN---------NRKVYELSNVQE-DSQ-PMCYSNC 69 (450)
T ss_dssp CEEESSEEEEETTEEEEEEEECCS-SCCCEEEECSSSCEEECCSSTT---------TEEEEEEEEECS-CBC-CEEEEEE
T ss_pred cccCCCceEEecCCcEEEEEEccC-CCcccccccceeeecceEecCC---------CceEEEEEeccc-CCe-eEEEEeC
Confidence 456678889999999999999999 88898 999998765432 223689999987 999 9999987
Q ss_pred CcccceeEEEEEecCCCeee-cCCCceEEcCCCeEEEEEEEecCCCc---eEEEeeCceeeecCCceEEEEeCCeEEEEE
Q psy7042 168 SVGFAHTSSRVKIGTPPRID-RMPNALYIPEGDNTKVKIFYAGDQPM---EVSLTKNGRVVQSDDRFKFTVLDDYIIIFI 243 (2245)
Q Consensus 168 ~~g~~~~~~~l~V~~~P~~~-~~~~~~~v~~G~~~~l~C~~~g~p~~---~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i 243 (2245)
..+..+.++.|.|..+|.+. ..+.+..+.+|+.+.|.|.+.|.|++ .|+|||+|..+....... ......|.|
T Consensus 70 ~~~~~~~~~~l~V~~~P~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~g~~l~~~~~~~---~~~~~~L~i 146 (450)
T 1z7z_I 70 PDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAVG---EPAEVTTTV 146 (450)
T ss_dssp TTEEEEEECEEEEEBCCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEECCT---TTEEEEEEE
T ss_pred CCCcceeEEEEEEEeCCCcceecCCCceEeeCCeEEEEEEecCCCCCcCcEEEEeeCCEEeecccccc---cccceEEEE
Confidence 77777778899999888766 56777899999999999999998887 999999999986543211 233458999
Q ss_pred cccCccCceeEEEEEEcCCcceE--------EEEEEEEecCCCCCCCCcccceeeccceEEEecCCCCCCCceeEEEEEE
Q psy7042 244 KEIRKEDAGDYTVNLSNSSGSVS--------GTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVE 315 (2245)
Q Consensus 244 ~~~~~~d~G~Y~C~a~n~~g~~~--------~~~~l~V~~~p~~~~~~~~~~~~~~~s~~~~w~pp~~~~~~~~~~~~~~ 315 (2245)
.++..+|+|.|+|.|.|..|... ....|.|...|..+.. ..
T Consensus 147 ~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~~~~~p~---------------------------~~---- 195 (450)
T 1z7z_I 147 LVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQ---------------------------LV---- 195 (450)
T ss_dssp ECCSSCSSCEEEEEEEEECGGGTSCEEEEECCCEECEECCCCSSCCE---------------------------EE----
T ss_pred EeeccccCceEEEEEEcccCCCCceEEeeccCccceeeeccCCCCCE---------------------------ec----
Confidence 99999999999999999987533 3344444433111100 00
Q ss_pred EEecCCCceEEeeeccCcceEEEcCCCCCCEEEEEEEEEecCCCCCCCCCCCceecCCCCCCCCCCCCcEEEeecCCeeE
Q psy7042 316 RRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVN 395 (2245)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~c~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~v~~~~~~~~~ 395 (2245)
.. ..+..|+...+.|.+... . | .+.+.
T Consensus 196 ---------------~~------~~v~~G~~v~l~C~~~g~---~-----------------P------------~~~~~ 222 (450)
T 1z7z_I 196 ---------------SP------RVLEVDTQGTVVCSLDGL---F-----------------P------------VSEAQ 222 (450)
T ss_dssp ---------------CC------SEEETTSEEEEEEEEESC---T-----------------T------------GGGCE
T ss_pred ---------------Cc------eeEEeCCcEEEEEEeeCC---C-----------------C------------CCceE
Confidence 00 123468888899988421 0 0 01457
Q ss_pred EEecCCCCCCCCCccEEEEEeeecCCCCcEEEeeeecCCceeecCCcccCceE--EEEEEeecCCCCCCCCCCCCcEEec
Q psy7042 396 LSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQY--EFRVYAQNEAGLSLPSSASNSVQIK 473 (2245)
Q Consensus 396 l~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g--~y~c~a~n~~g~~~~s~~~~~v~~~ 473 (2245)
+.|.+...... .. +..... .....+.+ ++...|.| .|+|.|.|..|... ....+.+.
T Consensus 223 ~~W~~~~~~~~---~~--~~~~~~------------~~~~~~~~-~v~~~d~G~~~Y~C~a~n~~g~~~---~~~~l~V~ 281 (450)
T 1z7z_I 223 VHLALGDQRLN---PT--VTYGND------------SFSAKASV-SVTAEDEGTQRLTCAVILGNQSQE---TLQTVTIY 281 (450)
T ss_dssp EEEEETTEECC---CE--EEEETT------------EEEEEEEE-ECCGGGCEEEEEEEEEEETTEEEE---EEEEEEEE
T ss_pred EEEeCCCEeCC---ce--EEecCC------------ceeEEEEE-EeEhhhCCcEEEEEEEccCCccEE---EEEEEEEe
Confidence 89987422111 11 111000 00011122 66889999 99999999987643 23334443
Q ss_pred CCcccCCCceeccccccccccccceeeEEEEeccCcCeEEEEeCCeecCCCccEEEEeeCCeEEEEEecccccCCceEEE
Q psy7042 474 DPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVC 553 (2245)
Q Consensus 474 ~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 553 (2245)
. ..+|.+.. .+..+.+|+.+.|.|.+. |.+.++| +|..+.. .+....|.|.++..+|+|.|+|
T Consensus 282 ~---~~~p~i~~--~~~~v~~G~~v~l~C~~~--p~p~i~W--~g~~~~~--------~~~~~~L~i~~~~~~d~G~Y~C 344 (450)
T 1z7z_I 282 S---FPAPNVIL--TKPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQP--------LGPRAQLLLKATPEDNGRSFSC 344 (450)
T ss_dssp C---CCCCEEEE--SCSEEETTCEEEEEEEC----------------------------CCCCCEEEECCGGGTTCEEEE
T ss_pred c---CCCCeEec--CCeeEeCCCcEEEEEecC--CCCEeEE--CCEEcCC--------CCceEEEEEecCcccCCceEEE
Confidence 2 12455543 356899999999999998 8899999 7766621 2223379999999999999999
Q ss_pred EEEeCCC-C---CCcceeEeEecCCCCCCCCCcccceEeeCCCeEEEEEeeeecCCCeEEEEeCCeEeeccCeEEEEecC
Q psy7042 554 RAVNKGG-V---KSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSE 629 (2245)
Q Consensus 554 ~a~n~~g-~---~~~~~~l~v~~~p~~~~~p~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~ 629 (2245)
.|.|..| . ...++.|.|..+|.+...+. .....+.+|+.++|.|.+.|.|.|.|+|+++|..+...+.
T Consensus 345 ~a~n~~~g~~~~~~~~~~l~V~~~P~~~~~~~-p~~~~~~~g~~~~l~C~~~g~P~p~i~W~~~g~~~~~~g~------- 416 (450)
T 1z7z_I 345 SATLEVAGQLIHKNQTRELRVLYGPRLDERDC-PGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLPIGE------- 416 (450)
T ss_dssp EEEEEETTEEEEEEEEEECEEEEEEECCSTTS-CSEEEEETTCEECCCCCCEEESCCEEEEEETTTEECCTTS-------
T ss_pred EEEcCCCCcccccceeEEEEEecCCceeeccC-CCceeEcCCCeEEEEEecccCCCCcEEEEECCcccCCCCC-------
Confidence 9997655 3 34678899999888765532 2345688999999999999999999999999984433221
Q ss_pred CeEEEEEcCCCCCcCEEEEEEEEeCCCCceeEEEEEeeCC
Q psy7042 630 RHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDR 669 (2245)
Q Consensus 630 ~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~ 669 (2245)
.+ .++..|+|.|+|.|.|..|..+..+.|.|..+
T Consensus 417 ---~~---~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~ 450 (450)
T 1z7z_I 417 ---SV---TVTRDLEGTYLCRARSTQGEVTREVTVNVLSP 450 (450)
T ss_dssp ---CE---ECCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred ---eE---eEehhhCeEEEEEEEeCCCceeEEEEEEEEcC
Confidence 12 47889999999999999999999999998753
No 20
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=100.00 E-value=4.3e-36 Score=396.24 Aligned_cols=458 Identities=12% Similarity=0.164 Sum_probs=304.3
Q ss_pred cCCcceEEeCCCeEEEEEEEeeecCCceEEEECC--eecc------------CCCeEEEEEcCcEEEEEEeeeccCCCeE
Q psy7042 95 VPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNG--REIS------------SGARYRVETAGGVFRLHFNEVTDVDNGD 160 (2245)
Q Consensus 95 ~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g--~~l~------------~~~~~~~~~~~~~~~L~i~~~~~~d~G~ 160 (2245)
..|..+.+.+|+.++|.|.+.+.|.+.|.|+|++ ..+. ...|+.....++...|.|.+++.+|+|.
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 84 (523)
T 2rcj_C 5 TQPPSASGTPGQRVTISCTGTSSGSITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGSKSGTSASLAISGLEAEDESD 84 (523)
T ss_pred ccCCceEEecCCcEEEEEEEeccCCceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEecCCCEEEEEECCCChhhCEE
Confidence 3456788999999999999999999999999974 2211 1357776666677789999999999999
Q ss_pred EEEEEEcCccc---ceeEEEEEe----cCCCeeecCCCceEEcCCCeEEEEEEEecCCCc--eEEEeeCceeeecCCceE
Q psy7042 161 YTCEAYNSVGF---AHTSSRVKI----GTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPM--EVSLTKNGRVVQSDDRFK 231 (2245)
Q Consensus 161 Y~C~a~n~~g~---~~~~~~l~V----~~~P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~--~i~W~~~g~~l~~~~~~~ 231 (2245)
|+|.|.|..|. ....+.|.| ..+|.+...+....+.+|+.++|.|.+.|.|++ .|+|+|||..+..+..+.
T Consensus 85 Y~C~a~n~~g~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~ 164 (523)
T 2rcj_C 85 YYCASWNSSDNSYVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETT 164 (523)
T ss_pred EEEEEccCCCccccccCceEEEeccCCCcCCeEEecCCcccccCCCceEEEEEeccccCCceEEEEecCCCCCCCceEec
Confidence 99999998763 234567888 467888777777778899999999999998754 999999999886543322
Q ss_pred EEE--eCC----eEEEEEcccCccCceeEEEEEEcCCcceEEEEEEEEecCC-CCCCCCcccceeeccceEEEecCCCCC
Q psy7042 232 FTV--LDD----YIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLP-GPPIGPLDVSEITKHTCTLHWNPPKYD 304 (2245)
Q Consensus 232 ~~~--~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p-~~~~~~~~~~~~~~~s~~~~w~pp~~~ 304 (2245)
... .+. ...|.|.++..+|+|.|+|.|.|..|....++.+.+...+ .+|. +.. .+
T Consensus 165 ~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~P~----v~~----------~~---- 226 (523)
T 2rcj_C 165 KPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECSASTKGPS----VFP----------LA---- 226 (523)
T ss_pred cccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCcccccceeeeecCCCCcCCE----EEe----------cC----
Confidence 111 111 1369999999999999999999998876665554332111 1110 000 00
Q ss_pred CCceeEEEEEEEEecCCCceEEeeeccCcceEEEcCCCCCCEEEEEEEEEecCCCCCCCCCCCceecCCCCCCCCCCCCc
Q psy7042 305 GGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIP 384 (2245)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~c~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~ 384 (2245)
. . ..+..|+...+.|.+...
T Consensus 227 ---------------------------~--~---~~~~~G~~~~l~C~~~g~---------------------------- 246 (523)
T 2rcj_C 227 ---------------------------P--S---SKSTSGGTAALGCLVKDY---------------------------- 246 (523)
T ss_pred ---------------------------C--C---cccccCCceEEEEEEece----------------------------
Confidence 0 0 112457888888987310
Q ss_pred EEEeecCCeeEEEecCCCCCCCCCccEEEEEeeecCCCCcEEEeeeecCCceeecCCcccCceEEEEEEeecCCCCCCCC
Q psy7042 385 VVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPS 464 (2245)
Q Consensus 385 ~v~~~~~~~~~l~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~s 464 (2245)
.+..+.+.|.++...... ..+ .......+. ....+.|.|.++..+| |.|+|.|.|..|...
T Consensus 247 -----~P~p~~v~W~k~g~~~~~--~~~--~~~~~~~g~-------~~~~s~L~i~~~~~~d-G~Y~C~a~n~~g~~~-- 307 (523)
T 2rcj_C 247 -----FPQPVTVSWNSGALTSGV--HTF--PAVLQSSGL-------YSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK-- 307 (523)
T ss_pred -----eCCCeEEEEecCCcccce--EeC--CcEecCCCc-------EEEEEEEEechhhcCC-ceEEEEEEeCCCCcc--
Confidence 012348999986332110 000 000000000 0112479999999999 999999999998642
Q ss_pred CCCCcEEecCCcccCCCceeccccccc-cccccceeeEEEEeccCc----CeEEEEeCCeecCCCccEEEE--eeCC---
Q psy7042 465 SASNSVQIKDPMAAKAPEIIVPLRNAN-AIQNHNAQFQCTITGCPK----PTISWLKGSREITPSARHHIF--AEGD--- 534 (2245)
Q Consensus 465 ~~~~~v~~~~~~~~~~p~~~~~~~~~~-~~~g~~~~l~C~~~g~p~----~~v~W~~~~~~i~~~~~~~~~--~~~~--- 534 (2245)
....+.+. ..|+.++..+.... +.+|+.+.|.|.+.|.|+ +.|+|+|+|..+......... .++.
T Consensus 308 -~~~~l~v~----~~P~~~~~~p~~~~~v~~g~~~~l~C~~~g~~p~~~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~ 382 (523)
T 2rcj_C 308 -VDKRVEPL----SLPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPQVKFNWYVDGVQVHNAKTKPREQQYNSTYRV 382 (523)
T ss_pred -eEEecCCC----cCceEEecCCCchhhcccCCceEEEEEEecccCCCCceEEEEEECCeEccCCccCCceecCCCcEEE
Confidence 11222211 12333344444444 789999999999999653 599999999998765432211 1221
Q ss_pred eEEEEEecccccCCceEEEEEEeCCCCCCcceeEe----EecCCCCCCCCCcccceEeeCCCeEEEEEeeeecCCC--eE
Q psy7042 535 TYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELI----IMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKP--KI 608 (2245)
Q Consensus 535 ~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~----v~~~p~~~~~p~~~~~~~~~~g~~~~l~C~~~g~p~~--~i 608 (2245)
...|.|.++..+|+|.|+|.|.|..+.......+. +..+|.+...+.. ...+. +..++|.|.+.|.|++ .|
T Consensus 383 ~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~P~v~~~~~~--~~~~~-~~~~~l~C~~~g~~p~~~~v 459 (523)
T 2rcj_C 383 VSVLTVLHQNWLDGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPS--REEMT-KNQVSLTCLVKGFYPSDIAV 459 (523)
T ss_pred EEEEEECHHHhcCCCeEEEEEeCCCCCCceeEEEEcccCCCCCCEEEEeCCC--hHHcc-CCceEEEEEEEeeECCCCEE
Confidence 23589999999999999999999888776555555 3445544322211 11133 4449999999998766 89
Q ss_pred EEEeCCeEeeccCeEEEEec--CC---eEEEEEcCCCCCcCEEEEEEEEeCCCC
Q psy7042 609 TWYRDNEVIESGGHFHVETS--ER---HAILTIRDASNVDTAPYRVVAENDLGM 657 (2245)
Q Consensus 609 ~W~~~~~~~~~~~~~~~~~~--~~---~~~l~i~~~~~~d~g~y~C~a~n~~g~ 657 (2245)
+|+++|..+........... +. ...|.|......|.|.|+|.|.|....
T Consensus 460 ~W~k~g~~~~~~~~~~~~~~~~gt~~~~~~l~v~~~~~~~~g~Y~C~a~n~~l~ 513 (523)
T 2rcj_C 460 EWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALH 513 (523)
T ss_pred EEEECCEECCCeeeccceeCCCCCEEEEEEEEEChHHccCCCeEEEEEEcCCcC
Confidence 99999998864433222111 11 234566666667899999999987653
No 21
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=100.00 E-value=4.6e-37 Score=405.57 Aligned_cols=451 Identities=17% Similarity=0.230 Sum_probs=318.1
Q ss_pred CCCCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECCeeccCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEEc
Q psy7042 88 GEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYN 167 (2245)
Q Consensus 88 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 167 (2245)
..||.|...+.++.+.+|+.++|.|.+.+ .|.|+|+|..+. ... ...+|.|.+++.+|+|.|+|.|.|
T Consensus 34 ~~pP~i~~~~~~~~v~~G~~v~l~C~~~~----~v~W~~~~~~~~------~~~--~~~~L~I~~~~~~D~G~Y~C~a~n 101 (524)
T 2ec8_A 34 PSPPSIHPGKSDLIVRVGDEIRLLCTDPG----FVKWTFEILDET------NEN--KQNEWITEKAEATNTGKYTCTNKH 101 (524)
T ss_dssp CCCCEEESCCSEEECCTTSCEEEEEECTT----EEEEEEESSSCC------EEE--CSSEEEESSCCSTTCEEEEEEETT
T ss_pred CCCCccCCCCceEEEeCCCeEEEEEeCCc----eEEEcCCCcccc------ccC--ccceEEEcccchhhCEEEEEeecC
Confidence 36899988888899999999999999986 799999998772 122 223699999999999999999999
Q ss_pred CcccceeEEEEEecCCCeeecCCCceEEcCCCeEEEEEEEecCCCceEEEee-CceeeecCCceEEEEeCCeEEEEEccc
Q psy7042 168 SVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTK-NGRVVQSDDRFKFTVLDDYIIIFIKEI 246 (2245)
Q Consensus 168 ~~g~~~~~~~l~V~~~P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~i~W~~-~g~~l~~~~~~~~~~~~~~~~L~i~~~ 246 (2245)
|. +.++.|.|..+|.+...+.+..+.+|+.++|.|.+.+.|.+.|+||| ||..+..+.++.+...+ .|.|.++
T Consensus 102 --g~-~~~~~l~V~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~v~W~~~~g~~l~~~~~~~~~~~~---~L~i~~~ 175 (524)
T 2ec8_A 102 --GL-SNSIYVFVRDPAKLFLVDRSLYGKEDNDTLVRCPLTDPEVTNYSLKGCQGKPLPKDLRFIPDPKA---GIMIKSV 175 (524)
T ss_dssp --SC-EEEEEEECCCSSCSBCCCCCCCEETTSCEEECCCBSCCCCSCEEEECSSSCCCCSSCEEEEETTT---EEEEESC
T ss_pred --Cc-ceEEEEEECCCCcccccccceEEEcCCeEEEECcCCCCccceEEEEccCCcCcCCCCceeECCCc---cEEEecc
Confidence 53 77888999998887778888999999999999999987779999998 89888776665544322 6999999
Q ss_pred CccCce-eEEEEEEcCCcce-EEEEEEEEecCCCCCCCCcccceeeccceEEEecCCCCCCCceeEEEEEEEEecCCCce
Q psy7042 247 RKEDAG-DYTVNLSNSSGSV-SGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHW 324 (2245)
Q Consensus 247 ~~~d~G-~Y~C~a~n~~g~~-~~~~~l~V~~~p~~~~~~~~~~~~~~~s~~~~w~pp~~~~~~~~~~~~~~~~~~~~~~~ 324 (2245)
..+|+| .|+|.|.|..|.. +..+.|.|...
T Consensus 176 ~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~------------------------------------------------ 207 (524)
T 2ec8_A 176 KRAYHRLCLHCSVDQEGKSVLSEKFILKVRPA------------------------------------------------ 207 (524)
T ss_dssp CGGGTTCEEEEEEC----CCCCCCEECCEECC------------------------------------------------
T ss_pred chhhCCceEEEEEEECCceEEEEEEEEEEEeC------------------------------------------------
Confidence 999999 9999999865543 12333333210
Q ss_pred EEeeeccCcceEEEcCCCCCCEEEEEEEEEecCCCCCCCCCCCceecCCCCCCCCCCCCcEEEeecCCeeEEEecCCCCC
Q psy7042 325 ICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDD 404 (2245)
Q Consensus 325 ~~~~~~~~~~~~~i~~l~~~~~~~~~c~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~v~~~~~~~~~l~W~~~~~~ 404 (2245)
T Consensus 208 -------------------------------------------------------------------------------- 207 (524)
T 2ec8_A 208 -------------------------------------------------------------------------------- 207 (524)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCccEEEEEeeecCCCCcEEEeeeecCCceeecCCcccCceEEEEEEeecCCCCCCCCCCCCcEEecCCcccCCCcee
Q psy7042 405 GGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEII 484 (2245)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~s~~~~~v~~~~~~~~~~p~~~ 484 (2245)
...+|.|.
T Consensus 208 ------------------------------------------------------------------------~~~~p~i~ 215 (524)
T 2ec8_A 208 ------------------------------------------------------------------------FKAVPVVS 215 (524)
T ss_dssp ------------------------------------------------------------------------CCSCCEEE
T ss_pred ------------------------------------------------------------------------CCCCCcEE
Confidence 01245555
Q ss_pred ccccccccccccceeeEEEEeccCcCe-EEEEeCCeec--CCCccEEEEe---eCCeEEEEEecccccCCceEEEEEEeC
Q psy7042 485 VPLRNANAIQNHNAQFQCTITGCPKPT-ISWLKGSREI--TPSARHHIFA---EGDTYTLIINSVYGVDADEYVCRAVNK 558 (2245)
Q Consensus 485 ~~~~~~~~~~g~~~~l~C~~~g~p~~~-v~W~~~~~~i--~~~~~~~~~~---~~~~~~L~i~~v~~~d~G~Y~C~a~n~ 558 (2245)
..+.+..+.+|+++.|.|.+.|.|.+. +.|++++..+ ....+..+.. ......|.|.++..+|+|.|+|.|.|.
T Consensus 216 ~~~~~~~v~~G~~v~L~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~ 295 (524)
T 2ec8_A 216 VSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNT 295 (524)
T ss_dssp CSCSEEEEETTSCEEEEEEEEESSTTCEEEEEETTCSCCCCEEEEEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECS
T ss_pred ecCCcceEEcCCcEEEEEEEecCCCcEEEEEEeCCCCCccccccccccccCCccceEEEEEECCCCHHHCEEEEEEEEec
Confidence 555566788999999999999998887 9999999884 3333322221 123458999999999999999999999
Q ss_pred CCCCCcceeEeEecCCCCCCCCCcccceEeeCCCeEEEEEeeeecCCCe-EEEEeCCeEeeccC-eEEEEecC----CeE
Q psy7042 559 GGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPK-ITWYRDNEVIESGG-HFHVETSE----RHA 632 (2245)
Q Consensus 559 ~g~~~~~~~l~v~~~p~~~~~p~~~~~~~~~~g~~~~l~C~~~g~p~~~-i~W~~~~~~~~~~~-~~~~~~~~----~~~ 632 (2245)
.|.....+.|.|..+|.+...+.......+.+|+.++|.|.+.|.|.|. ++|++++..+.... ++.....+ ...
T Consensus 296 ~g~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~ 375 (524)
T 2ec8_A 296 FGSANVTTTLEVVDKGFINIFPMINTTVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVS 375 (524)
T ss_dssp SCEEEEEEEEEEESSCEEEEEESSCSEEEECTTCCEEEEEEEEEESCCCEEEEESSSCBCSSSBCCEESCCSSSCCEEEE
T ss_pred CCceEEEEEEEEeccCceEeecCCCceEEEcCCCcEEEEEEEeecCCCcEEEEEECCeeccCCccceeEEccCCCceeEE
Confidence 9999889999999988876555433456789999999999999999999 99999999887654 33332222 357
Q ss_pred EEEEcCCCCCcCEEEEEEEEeCCCCceeEEEEEeeCCCCCCC-------CCeeeeecCCcEEEEeeCCCCCCCcccccEE
Q psy7042 633 ILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQ-------FPTVEDIGHDSLALVWRAPIWDGGSNITNYI 705 (2245)
Q Consensus 633 ~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~P~~p~-------~~~~~~~~~~si~lsW~~p~~~~~~~~~~y~ 705 (2245)
.|.|.++..+|.|.|+|.|.|..|..+..+.|.|..+|.... .+.+...+.-...++|... ++ .+..+.
T Consensus 376 ~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P~i~~~~~~~~g~l~C~~~g~P~p~i~W~~~---~~-~~~~~~ 451 (524)
T 2ec8_A 376 ELHLTRLKGTEGGTYTFLVSNSDVNAAIAFNVYVNTKPEILTYDRLVNGMLQCVAAGFPEPTIDWYFC---PG-TEQRCS 451 (524)
T ss_dssp EEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECEEEEEEEEECCSSSCEEEEEEEESCCEEECCCC------------
T ss_pred EEEEeecCcccCeEEEEEEEecCceEEEEEEEEEecCCeEeecccCcCcEEEEEEEeecCCEEEEEEC---CC-cccccc
Confidence 899999999999999999999999999999999877663111 2333333333445566521 11 110000
Q ss_pred EEeeeCCCC--CeEEEceeee-eeEEEecCCCCCEEEEEEEEEecccCCCCCCCCccE
Q psy7042 706 VEKREHPMS--SWIRVGNTRF-TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLI 760 (2245)
Q Consensus 706 v~~~~~~~~--~w~~~~~~~~-~~~~i~~L~p~t~y~~~v~a~n~~G~~~~s~~~~~~ 760 (2245)
-........ .......... ....+......+...|+|.|.|..|....+..+.+.
T Consensus 452 ~~~~~~~~~~~~~~~~~~g~~~~~s~l~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 509 (524)
T 2ec8_A 452 ASVLPVDVQTLNSSGPPFGKLVVQSSIDSSAFKHNGTVECKAYNDVGKTSAYFNFAFK 509 (524)
T ss_dssp --CCCCCCCCCCC-CCSSSCEEEEEEECCCSCCC-----CEEECSSCEEECCCCCCC-
T ss_pred cccCCCCceeeeeccCCCCcceEEEEEEEEEccCCEEEEEEEEcCCCceEEEEEEEEe
Confidence 000000000 0000000000 011133334577889999999999987666655544
No 22
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=100.00 E-value=4.1e-35 Score=401.16 Aligned_cols=566 Identities=15% Similarity=0.153 Sum_probs=304.5
Q ss_pred CCCeEEEEEEEeeecCCceEEEECCeeccCCCeEEEEEcCcEEEEEEeee-ccCCCeEEEEEEEcCccccee-EEEEEe-
Q psy7042 104 LGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEV-TDVDNGDYTCEAYNSVGFAHT-SSRVKI- 180 (2245)
Q Consensus 104 ~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~-~~~d~G~Y~C~a~n~~g~~~~-~~~l~V- 180 (2245)
.+..+.|.|++.|.|.|.+.|.|+|..+....+. .|.|..+ ..+..+.|+|.+.|..|.... .+.+.+
T Consensus 90 ~~g~l~v~c~~~g~P~p~i~W~k~g~~~~~~~~~---------~~~i~~~~~~~~~l~~~~va~~~~G~~~~~~v~~~~~ 160 (731)
T 2v5y_A 90 PPGLLNVYVKVNNGPLGNPIWNISGDPTRTWNRA---------ELAISTFWPNFYQVIFEVITSGHQGYLAIDEVKVLGH 160 (731)
T ss_dssp CSEEEEEEEEETTCCCCSEEEEECCCCCSSCEEE---------EEEECCCTTSCEEEEEEEEECSSCCEEEECCBEEESS
T ss_pred CcceEEEEEecCCCCccceeEEEeCCcCCceeEE---------EEEEeecCCCceEEEEEEEecCCceEEEEeeEEeeec
Confidence 3568999999999999999999999887543221 2444444 223346777777776665433 222333
Q ss_pred --cCCCeeecCCCceEEcCCCeEEEEEEEecCCCceEE-Ee--eCceeeecCCceEEEEeCCeEEEEEcccCccCceeEE
Q psy7042 181 --GTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVS-LT--KNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYT 255 (2245)
Q Consensus 181 --~~~P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~i~-W~--~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 255 (2245)
..+|.+. .+.+..+.+|+.++|.|.+.|.|.|.+. |+ +||..+.......+........|.|.++...|+|.|+
T Consensus 161 ~~~~~p~~~-~~~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~~~~~~~~~~~~~~~l~I~~~~~~d~g~Y~ 239 (731)
T 2v5y_A 161 PCTRTPHFL-RIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYR 239 (731)
T ss_dssp CCSSSCEEC-CCCCEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEEEEEEEECCSSEEEEEEEECSCCTTTCEEEE
T ss_pred ccccccccc-cccceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCccccccceEEeccccceEEEEEcccccccCeEEE
Confidence 3578877 5668999999999999999999999998 88 7888876443222211223468999999999999999
Q ss_pred EEEEcCCcc-eEEEEEEEEecCCCCCCCCcccceeeccceEEEecCCCCCCCceeEEEEEEEEecCCCceEEeeeccCcc
Q psy7042 256 VNLSNSSGS-VSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDT 334 (2245)
Q Consensus 256 C~a~n~~g~-~~~~~~l~V~~~p~~~~~~~~~~~~~~~s~~~~w~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (2245)
|.|.|..|. .+..+.|.|..+|.++..+
T Consensus 240 c~A~n~~G~~~s~~~~l~V~~~P~~~~~p--------------------------------------------------- 268 (731)
T 2v5y_A 240 CMIRTEGGVGISNYAELVVKEPPVPIAPP--------------------------------------------------- 268 (731)
T ss_dssp EEEEETTEEEECCCEEEEEECCCCBSSCC---------------------------------------------------
T ss_pred EEEECCCCCcceeeEEEEEecCCCCCCCc---------------------------------------------------
Confidence 999999998 7778899998877654321
Q ss_pred eEEEcCCCCCCEEEEEEEEEecCCCCCCCCCCCceecCCCCCCCCCCCCcEEEeecCCeeEEEecCCCCCCCCCccEEEE
Q psy7042 335 TFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWI 414 (2245)
Q Consensus 335 ~~~i~~l~~~~~~~~~c~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~v~~~~~~~~~l~W~~~~~~~~~~~~~~~~ 414 (2245)
.+...+...+.|.|..+..++..++.+|.+
T Consensus 269 --------------------------------------------------~~~~~~~~~v~l~w~~~~~~g~~~i~~Y~v 298 (731)
T 2v5y_A 269 --------------------------------------------------QLASVGATYLWIQLNANSINGDGPIVAREV 298 (731)
T ss_dssp --------------------------------------------------EEEEECSSCEEEECCCSSBSSCSCCCEEEE
T ss_pred --------------------------------------------------ceeccCCceEEEEeCCcccCCCCccEEEEE
Confidence 111223344566665432222222222222
Q ss_pred EeeecCCCCcEEEeeeecCCceeecCCcccCceEEEEEEeecCCCCCCCCCCCCcEEecCCcccCCCceecccccccccc
Q psy7042 415 DKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQ 494 (2245)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~s~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~ 494 (2245)
.
T Consensus 299 ~------------------------------------------------------------------------------- 299 (731)
T 2v5y_A 299 E------------------------------------------------------------------------------- 299 (731)
T ss_dssp E-------------------------------------------------------------------------------
T ss_pred E-------------------------------------------------------------------------------
Confidence 1
Q ss_pred ccceeeEEEEeccCcCeEEEEeCCeecCCCccEEEEeeCCeEEEEEecccccCCceEEEEEEeCCCCCCcceeEeEecCC
Q psy7042 495 NHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAP 574 (2245)
Q Consensus 495 g~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p 574 (2245)
|.+.+.
T Consensus 300 -------------------~~~~~~------------------------------------------------------- 305 (731)
T 2v5y_A 300 -------------------YCTASG------------------------------------------------------- 305 (731)
T ss_dssp -------------------EEESSS-------------------------------------------------------
T ss_pred -------------------EEECCC-------------------------------------------------------
Confidence 111000
Q ss_pred CCCCCCCcccceEeeCCCeEEEEEeeeecCCCeEEEEeCCeEeeccCeEEEEecCCeEEEEEcCCCCCcCEEEEEEEE--
Q psy7042 575 KFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAE-- 652 (2245)
Q Consensus 575 ~~~~~p~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~-- 652 (2245)
.|.. + .......+.|.++.+.+.|.|+|.|.
T Consensus 306 ----------------------------------~~~~------------~-~~~~~~~~~i~~L~p~t~Y~~~V~A~~~ 338 (731)
T 2v5y_A 306 ----------------------------------SWND------------R-QPVDSTSYKIGHLDPDTEYEISVLLTRP 338 (731)
T ss_dssp ----------------------------------SCEE------------E-EECCSSEEEECSCCTTCEEEEEEEEECS
T ss_pred ----------------------------------CceE------------E-eccCcceEEEeCCCCCCEEEEEEEEEec
Confidence 0000 0 00001356777888899999999999
Q ss_pred eCCCCceeEEEEEe----eCCCCCCCCCeeeeecCCcEEEEeeCCCCCC-CcccccEEEEeeeCCCCCeEE------Ece
Q psy7042 653 NDLGMDSAIVKIQI----SDRPDPPQFPTVEDIGHDSLALVWRAPIWDG-GSNITNYIVEKREHPMSSWIR------VGN 721 (2245)
Q Consensus 653 n~~g~~~~~~~l~v----~~~P~~p~~~~~~~~~~~si~lsW~~p~~~~-~~~~~~y~v~~~~~~~~~w~~------~~~ 721 (2245)
|..|....+..+.+ ..+|.+|.++.+..++.+++.|+|++|..+. .+.+.+|.|+|+......|.. ...
T Consensus 339 N~~G~s~~S~~~~~~t~~~~p~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~~~~~~y~v~y~~~~~~~~~~~~~~~~~~~ 418 (731)
T 2v5y_A 339 GEGGTGSPGPALRTRTKCADPMRGPRKLEVVEVKSRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREEVSWDTE 418 (731)
T ss_dssp STTCSCCBCCCEEEECCCCCCSCCCEEEEEEEECSSCEEEEEECCCHHHHCSSSCEEEEEEEEESSSSEEEEEEEECCSS
T ss_pred CCCccccCCCcEEeeecCCCCCCCCceeEEEeccCCeEEEEEECCCcccccceeeeEEEEEEEccCCCCccceeEEEEec
Confidence 99997643322222 3456788888899999999999999875432 456789999998765444321 122
Q ss_pred eeeeeEEEecCCCCCEEEEEEEEEecccCCCCCCCCccEEecCccccccccccccccCCCceeecccccccccCCceEEE
Q psy7042 722 TRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDTFKKQIKKRQYDFDETGKKIRGKADEKVSDYDQYVFD 801 (2245)
Q Consensus 722 ~~~~~~~i~~L~p~t~y~~~v~a~n~~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 801 (2245)
.....+++.+|.|++.|.|+|.|.|..|.+. |....+.
T Consensus 419 ~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~-S~~~~~~----------------------------------------- 456 (731)
T 2v5y_A 419 NSHPQHTITNLSPYTNVSVKLILMNPEGRKE-SQELIVQ----------------------------------------- 456 (731)
T ss_dssp CSSCEEEECSCCSSCEEEEEEEEECSSCEEE-CCCEEEE-----------------------------------------
T ss_pred CCcceEEECCCCCCCEEEEEEEEEcCCCCCC-CceEEEE-----------------------------------------
Confidence 3456899999999999999999999999763 3321111
Q ss_pred EeeeccCccccccccceecccccccccccCceeEEEEeeecccCCeeEEEeeccCCchhhhhhheeeeeeeccCCCceEe
Q psy7042 802 IYSKYVPQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLIN 881 (2245)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 881 (2245)
T Consensus 457 -------------------------------------------------------------------------------- 456 (731)
T 2v5y_A 457 -------------------------------------------------------------------------------- 456 (731)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ecccccCCcceEEEEEEecCCCCCc--ccEEeeeeCceEEEEecCCCCCCCCccceEEEeeeecCCC--------ceEEe
Q psy7042 882 LHDAFEDDDEMVLIFEVLDRPHPPE--NLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNST--------VWTKV 951 (2245)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~~P~~p~--~l~~~~~~~~~~~l~W~~p~~~~g~~i~~y~i~~~~~~~~--------~~~~~ 951 (2245)
+..++|.+|. ++.... .++++.|+|++|...+| .|.+|.|+|...... ....+
T Consensus 457 ---------------T~~~~P~~p~~~~~~~~~-~~~si~l~W~~P~~~~g-~i~~Y~V~~~~~~~~~~~~~~~~~~~~~ 519 (731)
T 2v5y_A 457 ---------------TDEDLPGAVPTESIQGST-FEEKIFLQWREPTQTYG-VITLYEITYKAVSSFDPEIDLSNQSGRV 519 (731)
T ss_dssp ---------------CCCCCCCCCCTTTCEEEE-ETTEEEEECCCCSCCSS-CCCEEEEEEEEEEECC---CCCCCEEEE
T ss_pred ---------------ccCCCCCCCCcceEEeee-cCCeEEEEEcCCCCCCC-CccceEEEEEECcCCCccccccCcceEE
Confidence 1124555554 444433 47899999999987776 999999999875422 12223
Q ss_pred cceeeeceEEEecCCCCceeeEEEEEEeccccCCCccccCcccccCCCCCCCCCCCCee--EeecCCeEEEEecCCCCCC
Q psy7042 952 SSYVTTPFVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKG--VDSTEDSISLVWSKPRHDG 1029 (2245)
Q Consensus 952 ~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~s~~~~~~~~~t~~~~p~~p~~~~~--~~~~~~~v~l~W~~p~~~~ 1029 (2245)
......+.++|.+|.|++.|.|+|+|.|..|.|+++ .+.+.|...+|.+|..+.. ...+.+++.|+|.+|.. +
T Consensus 520 ~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s----~~~~~T~~~~P~~p~~~~~~~~~~~~~si~l~W~pp~~-~ 594 (731)
T 2v5y_A 520 SKLGNETHFLFFGLYPGTTYSFTIRASTAKGFGPPA----TNQFTTKISAPSMPAYELETPLNQTDNTVTVMLKPAHS-R 594 (731)
T ss_dssp EEETTCCEEEECSCCTTEEEEEEEEEEETTEEEEEE----EEEEECCCCCCCC---------------------------
T ss_pred eecCCcceEEecCCCCCCEEEEEEEEEeCCccCCCc----ccEEEcCCCCCCCCCcccccccccCCceEEEEEeCCCC-C
Confidence 334456789999999999999999999999999887 3567778888887765543 45678899999998854 4
Q ss_pred CCccceEEEEEEecCCccceecc-c-cccCCcceeEEEEeeccc---------ccCCccC--chhhhhhhhhcccccccc
Q psy7042 1030 GSPIQRYIVEKRLISDDKWIKAS-M-AHIPDTSLKYVLWVSEGK---------SIGSERG--STAQFLELLLMFIPNRVT 1096 (2245)
Q Consensus 1030 ~~~i~~y~v~~~~~~~~~~~~~~-~-~~~~~~~~~~~~w~~~~~---------~~~~~~~--~~~~~~~~~~~~~~~~i~ 1096 (2245)
+++|.+|.|.|+..+........ . ...+. .+.|..... .+..... ......+....+..+.+.
T Consensus 595 ~g~I~~Y~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~y~aa~~~p~~~~~~~~~~vg~~~~~~~~~n~ 670 (731)
T 2v5y_A 595 GAPVSVYQIVVEEERPRRTKKTTEILKCYPV----PIHFQNASLLNSQYYFAAEFPADSLQAAQPFTIGDNKTYNGYWNT 670 (731)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCceEEEEEEEEecCCCCCccccccccCccc----ccCHHHHhhcCCcceEEEEcChhhCcccCCEEECCCCeECCEECC
Confidence 56799999999865532110000 0 00000 000110000 0000000 000000000111122467
Q ss_pred cccCCcEEEEEEEEEecCCCCCCCCCCcceee
Q psy7042 1097 SLIENHEYEFRVCAVNAAGQGPWSSSSDIIMC 1128 (2245)
Q Consensus 1097 ~L~~~~~Y~~~v~A~n~~G~~~~s~~~~~~~~ 1128 (2245)
.|.|++.|.|+|+|.+.+|.+..+..+.+.+.
T Consensus 671 ~L~p~~~Y~i~v~A~s~~g~~~~~~~v~~~t~ 702 (731)
T 2v5y_A 671 PLLPYKSYRIYFQAASRANGETKIDCVQVATK 702 (731)
T ss_dssp --------------------------------
T ss_pred CCCCCCceEEEEEEEEecCCCcEeeeEEEecc
Confidence 79999999999999999999887776666554
No 23
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=100.00 E-value=4.2e-34 Score=362.29 Aligned_cols=370 Identities=24% Similarity=0.387 Sum_probs=309.2
Q ss_pred CCceeccCCceEEcCCCeEEEEEEecCcCCCeEEEeeC--CEeccC-----CceEEEEecCcEEEEEEeeeccCCCeEEE
Q psy7042 1697 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRN--GREISS-----GARYRVETAGGVFRLHFNEVTDVDNGDYT 1769 (2245)
Q Consensus 1697 ~p~~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~--~~~l~~-----~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 1769 (2245)
+|.|.. +.+..+.+|++++|.|.+.|.|.+.+.|+|+ |..+.. ..++.+....+...|.|.+++.+|+|.|+
T Consensus 1 ~P~i~~-~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~ 79 (389)
T 2jll_A 1 QPHIIQ-LKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYD 79 (389)
T ss_dssp CCEEEE-CCCEEEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEEE
T ss_pred CCeEEe-cCceEEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEEE
Confidence 355665 4567788899999999999999999999999 888764 46777776677788999999999999999
Q ss_pred EEEecCceeeEEEEEEEecCCCccccCCCceEEcCCCeEEEEEEEeccCCcEEEEEECCEEeecCC--ceEEEEcCCeEE
Q psy7042 1770 CEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDD--RFKFTVLDDYII 1847 (2245)
Q Consensus 1770 C~~~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~v~W~~~g~~l~~~~--~~~~~~~~~~~~ 1847 (2245)
|.|.|..|.....+.|.|..+|.+...+....+.+|+.+.|.|.+.|.|.+.+.|+++|..+.... ++.+...+....
T Consensus 80 C~a~n~~g~~~~~~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~~ 159 (389)
T 2jll_A 80 CEAASRIGGHQKSMYLDIEYAPKFISNQTIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRKMI 159 (389)
T ss_dssp EEEECSSCEEEEEEEEEEEEEEEECCSCCEEEECTTCCEEEEECEEEESCCEEEEEETTEESSCTTCTTEEEEECSSCEE
T ss_pred EEEEeCCCCcceEEEEEEEeCCEEecCcceEEeccCCEEEEEEEEEecCCCeEEEEECCccCCcccCceEEEeccCCEEE
Confidence 999999999999999999999998877766688999999999999999999999999999987654 555555566788
Q ss_pred EEEcccCcccceEEEEEEEcCCeeeEEEEEEEEeCCCCCCCCCceecccccceEEEEecCCCCCCCeeeeEEEEEEEcCC
Q psy7042 1848 IFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDIS 1927 (2245)
Q Consensus 1848 l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~ 1927 (2245)
|.|.++..+|+|.|+|.|.|..|.....+.+.+...|.+|. .+.+......++.|.|.+|..+++.++..|.+.+...+
T Consensus 160 L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~P~-~~~~~~~~~~~~~l~w~~p~~~~g~pi~~y~v~~~~~~ 238 (389)
T 2jll_A 160 LEIAPTSDNDFGRYNCTATNHIGTRFQEYILALADVPSSPY-GVKIIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVA 238 (389)
T ss_dssp EEECCCSTTSSEEEEEEEEETTEEEEEEEEEEECCCCCCCE-EEEEEEECSSCEEEEEECCSCCTTSCEEEEEEEEEETT
T ss_pred EEECCCChhhCEEEEEEEEcCCCcEEEEEEEEecCCCCCCc-ceEEeeccCCEEEEEEeCCCCCCCcceEEEEEEEEECC
Confidence 99999999999999999999999999999998887777663 35566677889999999988888889999999999988
Q ss_pred CCceEEEeeecCcceEEecCCCCCCeEEEEEEEECCCCCCCCCCCcCceeccCCCCCCCCCCCcEEEEEcCCeEEEEEec
Q psy7042 1928 MPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDK 2007 (2245)
Q Consensus 1928 ~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~~~a~n~~g~~~~s~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~v~l~W~~ 2007 (2245)
...|...........+.|.+|.+++.|.|+|.|.|..|.+.++......+ .+...|.+|. ........+++.|+|.+
T Consensus 239 ~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s~~~~~~t--~~~~~p~~p~-~~~~~~~~~~v~l~W~~ 315 (389)
T 2jll_A 239 SEIWKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQT--LPVREPSPPS-IHGQPSSGKSFKLSITK 315 (389)
T ss_dssp CSCCEEEECSTTCSEEEECSCCTTCEEEEEEEEEESSCBCCCCCCEEEEC--CCCCCCCCCC-EEEEEETTTEEEEEECC
T ss_pred CcccEEeeccCCcceEEECCccCCCEEEEEEEEEcCCccCCCCcceEEEe--cCCCCCCCCc-cccccCcCCEEEEEEEC
Confidence 88998877777778999999999999999999999999998876543332 3334566664 55666789999999997
Q ss_pred cCCCCCCceeEEEEEEeeecCccceEEEEEEeccceEEeCCCcCCceEEEEEEEEeccccCCCcC
Q psy7042 2008 PLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSS 2072 (2245)
Q Consensus 2008 p~~~~~~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~ 2072 (2245)
| .++++++.+|.|+|+..+...|............+.|.+|.++..|.|++.|.|..|.+.++.
T Consensus 316 p-~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~V~A~n~~G~s~~s~ 379 (389)
T 2jll_A 316 Q-DDGGAPILEYIVKYRSKDKEDQWLEKKVQGNKDHIILEHLQWTMGYEVQITAANRLGYSEPTV 379 (389)
T ss_dssp C-CCCSSCCCEEEEEEEC-----CCBCCEECTTCCEEEECSCCTTCEEEEEEEEEC-CCBCCCEE
T ss_pred C-CCCCCcccEEEEEEEeCCCCcceeEeeccCCcceEEeCCcCCCCEEEEEEEEEcCCcCCCcee
Confidence 6 456789999999999988888875544445567899999999999999999999999876553
No 24
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=100.00 E-value=4.6e-36 Score=379.00 Aligned_cols=364 Identities=21% Similarity=0.292 Sum_probs=284.6
Q ss_pred CCCceecCCcceEE---eCCCeEEEEEEEeeecCCceEEEECCeeccCC--CeEEEEEcCcEEEEEEeeecc-CCCeEEE
Q psy7042 89 EKPDFIVPLKDLVV---PLGKLLTLQCEATGTPVPKCRWLRNGREISSG--ARYRVETAGGVFRLHFNEVTD-VDNGDYT 162 (2245)
Q Consensus 89 ~~P~~~~~~~~~~v---~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~--~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~ 162 (2245)
.+|.|+..|.+..+ .+|+.++|.|.+.|.|.+.|.|+|+|..+... .++.+. ++ .|.|.++.. +|+|.|+
T Consensus 3 ~~P~~~~~p~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~k~g~~~~~~~~~~~~~~--~~--~L~i~~~~~~~D~G~Y~ 78 (382)
T 1cs6_A 3 YGPVFEEQPAHTLFPEGSAEEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRLV--AG--DLVISNPVKAKDAGSYQ 78 (382)
T ss_dssp EEEEEEECCCCEEEETTCSCCEEEECCEEEEESCCEEEEEETTEECCCSTTSSEEEE--TT--EEEEESCCHHHHCEEEE
T ss_pred CCCEEEECCCcEEEecCCCCCcEEEEEEecCCCCCEEEEEECCEECCcCCCccEEee--CC--eEEEecccccccCEEEE
Confidence 47999999998877 78999999999999999999999999998754 455543 44 499999987 9999999
Q ss_pred EEEEcCccccee-EEEEEecCCCeeec-CCCceEEcCCCeEEEEEEE-ecCCCceEEEeeCceeeecCCceEEEEeCCeE
Q psy7042 163 CEAYNSVGFAHT-SSRVKIGTPPRIDR-MPNALYIPEGDNTKVKIFY-AGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYI 239 (2245)
Q Consensus 163 C~a~n~~g~~~~-~~~l~V~~~P~~~~-~~~~~~v~~G~~~~l~C~~-~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~ 239 (2245)
|.|.|..|...+ .+.|.|..+|.+.. .+....+.+|+.+.|.|.+ .+.|.+.+.|+|++..+...............
T Consensus 79 C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~ 158 (382)
T 1cs6_A 79 CVATNARGTVVSREASLRFGFLQEFSAEERDPVKITEGWGVMFTCSPPPHYPALSYRWLLNEFPNFIPADGRRFVSQTTG 158 (382)
T ss_dssp EEEEETTEEEECCCEEEEEEEECCCCSSCCCCEEEETTSCEEECCCCCSEESCCEEEEEESSTTCBCCCCSSEEECTTTC
T ss_pred EEEEcCCcEEEecceEEEeeccccccccCCCceEEecCCcEEEEeCCCCCCCCcEEEEEECCCccccccCceEEEecCce
Confidence 999999887644 67788877666543 4677889999999999996 46788999999999875422211112223334
Q ss_pred EEEEcccCccCceeEEEEEEcCCcceEEEE-----EEEEecCCCCCCCCcccceeeccceEEEecCCCCCCCceeEEEEE
Q psy7042 240 IIFIKEIRKEDAGDYTVNLSNSSGSVSGTF-----TINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVV 314 (2245)
Q Consensus 240 ~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~-----~l~V~~~p~~~~~~~~~~~~~~~s~~~~w~pp~~~~~~~~~~~~~ 314 (2245)
.|.|.++..+|+|.|+|.|.|..|...... .|.|....
T Consensus 159 ~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~~------------------------------------- 201 (382)
T 1cs6_A 159 NLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAED------------------------------------- 201 (382)
T ss_dssp CEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCC-------------------------------------
T ss_pred EEEEEeeCcccCeeEEEEEEEccccccceeEccceeeccchhh-------------------------------------
Confidence 799999999999999999998764332211 11111000
Q ss_pred EEEecCCCceEEeeeccCcceEEEcCCCCCCEEEEEEEEEecCCCCCCCCCCCceecCCCCCCCCCCCCcEEEeecCCee
Q psy7042 315 ERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFV 394 (2245)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~c~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~v~~~~~~~~ 394 (2245)
T Consensus 202 -------------------------------------------------------------------------------- 201 (382)
T 1cs6_A 202 -------------------------------------------------------------------------------- 201 (382)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEecCCCCCCCCCccEEEEEeeecCCCCcEEEeeeecCCceeecCCcccCceEEEEEEeecCCCCCCCCCCCCcEEecC
Q psy7042 395 NLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKD 474 (2245)
Q Consensus 395 ~l~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~s~~~~~v~~~~ 474 (2245)
T Consensus 202 -------------------------------------------------------------------------------- 201 (382)
T 1cs6_A 202 -------------------------------------------------------------------------------- 201 (382)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcccCCCceec-cccccccccccceeeEEEEeccCcCeEEEEeCCeecCCCccEEEEeeCCeEEEEEecccccCCceEEE
Q psy7042 475 PMAAKAPEIIV-PLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVC 553 (2245)
Q Consensus 475 ~~~~~~p~~~~-~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 553 (2245)
....+|.+.. .+.+..+.+|+.+.|.|.+.|.|.+.+.|++++..+... .......|.|.++..+|+|.|+|
T Consensus 202 -~~~~~P~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~------~~~~~~~L~i~~~~~~d~G~Y~C 274 (382)
T 1cs6_A 202 -ARQYAPSIKAKFPADTYALTGQMVTLECFAFGNPVPQIKWRKLDGSQTSK------WLSSEPLLHIQNVDFEDEGTYEC 274 (382)
T ss_dssp -CCCEEEEEEECCCSEEEEETTCCEEEECEEEEESCCEEEEEECCSCCSCC------CSBSSSEEEECSCCGGGCEEEEE
T ss_pred -cccCCCceeccCCCceEEeCCCeEEEEEEEccCCCCEEEEEECCcccccE------EecCCcEEEEccCChhhCEEEEE
Confidence 0000122211 233566788999999999999999999999998876541 11223389999999999999999
Q ss_pred EEEeCCCCCCcceeEeEecCCCCCCCCCcccceEeeCCCeEEEEEeeeecCCCeEEEEeCCeEeeccCeEEEEecCCeEE
Q psy7042 554 RAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAI 633 (2245)
Q Consensus 554 ~a~n~~g~~~~~~~l~v~~~p~~~~~p~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~ 633 (2245)
.|.|..|.....+.|.|..+|.+...+. ...+..|+.++|.|.+.|.|.+.++|+++|..+....++.+. ...
T Consensus 275 ~a~n~~g~~~~~~~l~V~~~p~~~~~~~---~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~----~~~ 347 (382)
T 1cs6_A 275 EAENIKGRDTYQGRIIIHAQPDWLDVIT---DTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQNRIEVS----GGE 347 (382)
T ss_dssp EEEETTEEEEEEEEEEEEEEEEEEECCC---CEEEETTCCEEEECEEEEESCCEEEEEETTEECCCCSSEEEE----TTE
T ss_pred EEEcCCCeEEEEEEEEEecCCCcccCCC---ccEEcCCCeEEEEEEeeeecCCEEEEEECCEECCCCceEEEE----CCE
Confidence 9999999988899999998887654442 356888999999999999999999999999999887776654 248
Q ss_pred EEEcCCCCCcCEEEEEEEEeCCCCceeEEEEEee
Q psy7042 634 LTIRDASNVDTAPYRVVAENDLGMDSAIVKIQIS 667 (2245)
Q Consensus 634 l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~ 667 (2245)
|.|.++...|.|.|+|.|.|..|..+..+.|.|.
T Consensus 348 L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 381 (382)
T 1cs6_A 348 LRFSKLVLEDSGMYQCVAENKHGTVYASAELTVQ 381 (382)
T ss_dssp EEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEECcCCcccCEEEEEEEEeCCCeEEEEEEEEEe
Confidence 9999999999999999999999999999998875
No 25
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=100.00 E-value=9.9e-36 Score=378.48 Aligned_cols=374 Identities=17% Similarity=0.227 Sum_probs=282.9
Q ss_pred CCCCceecCCcceEEeCCCeEEEEEEEee-ecCCceEEEECCeeccCCC-eEEEEEcCcEEEEEEeeeccCCCeEEEEEE
Q psy7042 88 GEKPDFIVPLKDLVVPLGKLLTLQCEATG-TPVPKCRWLRNGREISSGA-RYRVETAGGVFRLHFNEVTDVDNGDYTCEA 165 (2245)
Q Consensus 88 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~g-~p~~~i~W~~~g~~l~~~~-~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a 165 (2245)
..+|.|...|.++.+.+|+.++|.|.+.+ .|.+.|.|+|+|..+.... ++.....++ +|.|.+++.+|+|.|+|.|
T Consensus 4 ~~~P~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~--~L~i~~~~~~D~G~Y~C~a 81 (395)
T 1bih_A 4 DKYPVLKDQPAEVLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEHNAALRKDEG--SLVFLRPQASDEGHYQCFA 81 (395)
T ss_dssp -CCCEECCCCSEEEEETTSCEEECCCEESCCSSCEEEEEESSSBCCTTTTTEEECTTSC--CEEESSCCGGGCEEEEEEE
T ss_pred CCCCEeecCCCceEEeCCCEEEEEEEEecCCCCceEEEEECCcCcccccceEEEecCCc--eEEEecCCCCCCcEEEEEE
Confidence 46899999999999999999999999998 8999999999999988665 333333333 5999999999999999999
Q ss_pred EcCccccee-EEEEEecCCCeeecCCCceEEcCCCeEEEEEEE-ecCCCceEEEeeCce---eeec----CCceEEEEeC
Q psy7042 166 YNSVGFAHT-SSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFY-AGDQPMEVSLTKNGR---VVQS----DDRFKFTVLD 236 (2245)
Q Consensus 166 ~n~~g~~~~-~~~l~V~~~P~~~~~~~~~~v~~G~~~~l~C~~-~g~p~~~i~W~~~g~---~l~~----~~~~~~~~~~ 236 (2245)
.|..|...+ .+.|.|...+.....+.+..+.+|+.+.|.|.+ .+.|.+.|.|+|+|. +... ..++.+..
T Consensus 82 ~n~~g~~~s~~~~l~v~~~~~p~~~~~~~~~~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~-- 159 (395)
T 1bih_A 82 ETPAGVASSRVISFRKTYLIASPAKTHEKTPIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITAGP-- 159 (395)
T ss_dssp EETTEEEECCCEEEEEEEEECCCCEEEEECCBTTEEEEECCCCCEEESCCEEEEEEEETTSCGGGCCCCCCTTEEECT--
T ss_pred EeCCCeEEeEEEEEEEEEeecCCcCCcceeeeeCCcEEEEecCCCCCCCCeEEEEecCCCcCcccccccccccEEEcC--
Confidence 999887653 456665443222234556778899999999996 789999999999872 2211 23333222
Q ss_pred CeEEEEEcccCccCce---eEEEEEEcCCcceEEEEEEEEecCCCCCCCCcccceeeccceEEEecCCCCCCCceeEEEE
Q psy7042 237 DYIIIFIKEIRKEDAG---DYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYV 313 (2245)
Q Consensus 237 ~~~~L~i~~~~~~d~G---~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~s~~~~w~pp~~~~~~~~~~~~ 313 (2245)
...|.|.++..+|+| .|+|.|.|..|.........+......+.
T Consensus 160 -~~~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~-------------------------------- 206 (395)
T 1bih_A 160 -DGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDN-------------------------------- 206 (395)
T ss_dssp -TSCEEEEEECGGGCCSSEEEEEEEECTTCSSCEEEEEEEECCCBCCS--------------------------------
T ss_pred -CCcEEEEEEeeccCCCceEEEEEEEecccceEEEeeeEEeccccccc--------------------------------
Confidence 226999999999999 99999999887643322221110000000
Q ss_pred EEEEecCCCceEEeeeccCcceEEEcCCCCCCEEEEEEEEEecCCCCCCCCCCCceecCCCCCCCCCCCCcEEEeecCCe
Q psy7042 314 VERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDF 393 (2245)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~c~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~v~~~~~~~ 393 (2245)
T Consensus 207 -------------------------------------------------------------------------------- 206 (395)
T 1bih_A 207 -------------------------------------------------------------------------------- 206 (395)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEEEecCCCCCCCCCccEEEEEeeecCCCCcEEEeeeecCCceeecCCcccCceEEEEEEeecCCCCCCCCCCCCcEEec
Q psy7042 394 VNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIK 473 (2245)
Q Consensus 394 ~~l~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~s~~~~~v~~~ 473 (2245)
...
T Consensus 207 ------------------------------------------------------------------------~~~----- 209 (395)
T 1bih_A 207 ------------------------------------------------------------------------SGY----- 209 (395)
T ss_dssp ------------------------------------------------------------------------SCC-----
T ss_pred ------------------------------------------------------------------------ccc-----
Confidence 000
Q ss_pred CCcccCCCceeccccccccccccceeeEEEEeccCcCeEEEEeCCeecCCCccEEEE--eeCCeEEEEEecccccCCceE
Q psy7042 474 DPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIF--AEGDTYTLIINSVYGVDADEY 551 (2245)
Q Consensus 474 ~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~~~~~--~~~~~~~L~i~~v~~~d~G~Y 551 (2245)
....+|.+ .+.+..+.+|+.+.|.|.+.|.|.+.+.|+|++..+.......+. .......|.|.++..+|+|.|
T Consensus 210 --~~~~~p~~--~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y 285 (395)
T 1bih_A 210 --KGEPVPQY--VSKDMMAKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVY 285 (395)
T ss_dssp --CCCCEEEE--ECCSEEEETTSCEEEEEEEECSSCCCCEEEETTEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEE
T ss_pred --cCCcCcee--cCCceEEECCCcEEEEEEeccCCCCeEEEEECCEEcCCCCceeEEEEecCCCceEEEccCChhhCEEE
Confidence 00011222 234566789999999999999999999999999988765333222 222233799999999999999
Q ss_pred EEEEEeCCCCCCc-ceeEeEecCCCCCCCCCcccceEeeCCCeEEEEEeeeecCCCeEEEEeCCeEeeccCeEEEEecCC
Q psy7042 552 VCRAVNKGGVKST-KAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSER 630 (2245)
Q Consensus 552 ~C~a~n~~g~~~~-~~~l~v~~~p~~~~~p~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~ 630 (2245)
+|.|.|..|.... .+.|.|..+|.+...+.. ...+..|+.++|.|.+.|.|.+.++|+++|..+..+ ++.+..
T Consensus 286 ~C~a~n~~g~~~~~~~~l~V~~~P~~~~~~~~--~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~-~~~~~~--- 359 (395)
T 1bih_A 286 TCEVDNGVGKPQKHSLKLTVVSAPKYEQKPEK--VIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPLSGG-RATVTD--- 359 (395)
T ss_dssp EEEECCSSSSCEEEEEEEEEEEEEEEEECCCS--EEEECTTSCEEEECEEEEESCCCCEEEETTEECCSS-SEEEET---
T ss_pred EEEEEeCCCCceEEEEEEEEEcCCccccCCCc--ceEecCCCeEEEEEEECcccCCeeEEEECCEECCCC-ceEEEC---
Confidence 9999999998766 899999998887655432 256889999999999999999999999999988654 555432
Q ss_pred eEEEEEcCCCCCcCEEEEEEEEeCCCCceeEEEEEe
Q psy7042 631 HAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQI 666 (2245)
Q Consensus 631 ~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v 666 (2245)
..|.|.++...|.|.|+|.|.|..|..+..+.|.|
T Consensus 360 -~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~V 394 (395)
T 1bih_A 360 -SGLVIKGVKNGDKGYYGCRATNEHGDKYFETLVQV 394 (395)
T ss_dssp -TEEEESSCCSTTCEEEEEEEEETTEEEEEEEEEEE
T ss_pred -CEEEEeeCCcccCEEEEEEEEccCCCceEEEEEEE
Confidence 38999999999999999999999999999888876
No 26
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=100.00 E-value=5.7e-34 Score=375.87 Aligned_cols=371 Identities=12% Similarity=0.096 Sum_probs=243.4
Q ss_pred eeeEEecCCeEEEEeeeecCCCCceeEecCC--cccc-----------CCCCcEEEeeecceeEEEEccCCcCCceEEEE
Q psy7042 1430 RDITVKAGEDFSIHVPFMAFPQPAAFWFAND--SIID-----------DSDTRVHKQLTMNSASLVVKNSQRSDGGQYRL 1496 (2245)
Q Consensus 1430 ~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~--~~~~-----------~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~c 1496 (2245)
..+++.+|+++.|.|.+.+.|.+.+.|+|++ ..+. ....|+.....+....|.|.+++.+|+|.|+|
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C 87 (523)
T 2rcj_C 8 PSASGTPGQRVTISCTGTSSGSITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGSKSGTSASLAISGLEAEDESDYYC 87 (523)
T ss_pred CceEEecCCcEEEEEEEeccCCceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEecCCCEEEEEECCCChhhCEEEEE
Confidence 4689999999999999999999999999975 2211 11345555555667899999999999999999
Q ss_pred EEEcCCcce---eeEEEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccchhccccccCcccccCCeEEEEecCC
Q psy7042 1497 QLKNPAGFD---TATLHSRLRTLPDSVNPRCHLPSSTSKERPKFPTHPNHQPWLKWARASLTSKGVDSTEDSISLVWSKP 1573 (2245)
Q Consensus 1497 ~a~n~~g~~---~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~w~~p 1573 (2245)
.|.|..|.. ...+.|.|...+.. .|.+...+. ......++.++|.|...
T Consensus 88 ~a~n~~g~~~~~~~~~~l~V~~~~~~--------------~P~~~~~~~--------------~~~~~~g~~v~l~C~~~ 139 (523)
T 2rcj_C 88 ASWNSSDNSYVFGTGTKVTVLGQPKA--------------NPTVTLFPP--------------SSEELQANKATLVCLIS 139 (523)
T ss_pred EEccCCCccccccCceEEEeccCCCc--------------CCeEEecCC--------------cccccCCCceEEEEEec
Confidence 999987632 23455666432211 000000000 00112234566666542
Q ss_pred CCCCCCccceEEEEEEecCCccceEeeccccCCccceEEEEeecCccCCCCCCccceeeEeeeCCeeeEEeccceeeece
Q psy7042 1574 RHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECS 1653 (2245)
Q Consensus 1574 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1653 (2245)
. .++ ....+.|++||+++.......... ......+. ....
T Consensus 140 g-----------------------------~~p-~~~~v~W~k~g~~l~~~~~~~~~~----~~~~~~~~------~~s~ 179 (523)
T 2rcj_C 140 D-----------------------------FYP-GAVTVAWKADGSPVKAGVETTKPS----KQSNNKYA------ASSY 179 (523)
T ss_pred c-----------------------------ccC-CceEEEEecCCCCCCCceEecccc----ccCCCCEE------EEEE
Confidence 1 111 113589999999986432111000 00000011 1247
Q ss_pred EEEeccCCCCeEEEEEEEEcCCCcCCCCCcCcceEEeeecCCCCCceeccCCceEEcCCCeEEEEEEecCc-CCC-eEEE
Q psy7042 1654 FSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGT-PVP-KCRW 1731 (2245)
Q Consensus 1654 l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~G~~v~L~C~~~~~-p~~-~v~W 1731 (2245)
|.|.++..+|.|.|+|.|.|..|....... +.+ ......+|.+........+.+|+.+.|.|.+.|. |.+ .++|
T Consensus 180 L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~---~~~-~~~~~~~P~v~~~~~~~~~~~G~~~~l~C~~~g~~P~p~~v~W 255 (523)
T 2rcj_C 180 LSLTPEQWKSHRSYSCQVTHEGSTVEKTVA---PTE-CSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPQPVTVSW 255 (523)
T ss_pred EEEechhcCCCceEEEEEEecCccccccee---eee-cCCCCcCCEEEecCCCcccccCCceEEEEEEeceeCCCeEEEE
Confidence 999999999999999999999876543321 111 1122345655533333556899999999999886 767 8999
Q ss_pred eeCCEeccCCceEEEEecCc----EEEEEEeeeccCCCeEEEEEEecCceeeEEEEEEEecCCCccc-cCCCceE-EcCC
Q psy7042 1732 LRNGREISSGARYRVETAGG----VFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRID-RMPNALY-IPEG 1805 (2245)
Q Consensus 1732 ~~~~~~l~~~~~~~~~~~~~----~~~L~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~l~V~~~p~~~-~~~~~~~-~~~g 1805 (2245)
+++|..+.......+...++ ...|.|.+++.+| |.|+|.|.|..|.......|.|...|.+. ..+.... +.+|
T Consensus 256 ~k~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~g~~~~~~~l~v~~~P~~~~~~p~~~~~v~~g 334 (523)
T 2rcj_C 256 NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPLSLPSVFLFPPKPKDTLMIS 334 (523)
T ss_pred ecCCcccceEeCCcEecCCCcEEEEEEEEechhhcCC-ceEEEEEEeCCCCcceEEecCCCcCceEEecCCCchhhcccC
Confidence 99998754321111112222 3469999999999 99999999999988777788777666643 3333333 7889
Q ss_pred CeEEEEEEEeccCC----cEEEEEECCEEeecCCceEEEEc-CC----eEEEEEcccCcccceEEEEEEEcCCeeeE
Q psy7042 1806 DNTKVKIFYAGDQP----MEVSLTKNGRVVQSDDRFKFTVL-DD----YIIIFIKEIRKEDAGDYTVNLSNSSGSVS 1873 (2245)
Q Consensus 1806 ~~~~l~C~~~~~p~----~~v~W~~~g~~l~~~~~~~~~~~-~~----~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~ 1873 (2245)
+.+.|.|.+.|.|+ +.|+|+|+|+.+........... ++ ...|.|.++..+|+|.|+|.|.|..+...
T Consensus 335 ~~~~l~C~~~g~~p~~~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~ 411 (523)
T 2rcj_C 335 RTPEVTCVVVDVSHEDPQVKFNWYVDGVQVHNAKTKPREQQYNSTYRVVSVLTVLHQNWLDGKEYKCKVSNKALPAP 411 (523)
T ss_pred CceEEEEEEecccCCCCceEEEEEECCeEccCCccCCceecCCCcEEEEEEEEECHHHhcCCCeEEEEEeCCCCCCc
Confidence 99999999998653 59999999998865433221111 11 13588999999999999999998766543
No 27
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=100.00 E-value=1.9e-35 Score=377.42 Aligned_cols=371 Identities=22% Similarity=0.351 Sum_probs=284.5
Q ss_pred CCCCceec-CCcceEEeCCCeEEEEEEEeeecCCceEEEECCeeccCC--CeEEEEEcCcEEEEEEe----eeccCCCeE
Q psy7042 88 GEKPDFIV-PLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSG--ARYRVETAGGVFRLHFN----EVTDVDNGD 160 (2245)
Q Consensus 88 ~~~P~~~~-~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~--~~~~~~~~~~~~~L~i~----~~~~~d~G~ 160 (2245)
..+|.|.. ++.++.+.+|+.++|.|.+.|.|.+.|.|+|+|..+... .++.+...++ +|.|. +++.+|+|.
T Consensus 14 ~~~P~i~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~--~l~i~~~~~~~~~~D~G~ 91 (404)
T 3p3y_A 14 TQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSG--TLVIDFRSGGRPEEYEGE 91 (404)
T ss_dssp CCCCCEEEECCTTCEECSSSCCCCCEEECCSSCCEEEEEETTEECCGGGCSSCBCCSSSC--CCBCCCTTTCCTTSSCEE
T ss_pred cCCCcccccCCccEEEcCCCCEEEEEEecCCCCCeEEEEECCEEeeeecCCcceEecCCc--eEEEEeccCCCCccCCEE
Confidence 46888886 577889999999999999999999999999999988643 2333333344 35554 889999999
Q ss_pred EEEEEEcCcccce-eEEEEEecCCCeeec-CCCceEEcCCCeEEEEEEE-ecCCCceEEEeeCceeee-cCCceEEEEeC
Q psy7042 161 YTCEAYNSVGFAH-TSSRVKIGTPPRIDR-MPNALYIPEGDNTKVKIFY-AGDQPMEVSLTKNGRVVQ-SDDRFKFTVLD 236 (2245)
Q Consensus 161 Y~C~a~n~~g~~~-~~~~l~V~~~P~~~~-~~~~~~v~~G~~~~l~C~~-~g~p~~~i~W~~~g~~l~-~~~~~~~~~~~ 236 (2245)
|+|.|.|..|... ..+.|.|..+|.+.. .+....+.+|+.++|.|.+ .+.|.+.+.|++++..+. ...++...
T Consensus 92 Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~--- 168 (404)
T 3p3y_A 92 YQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQG--- 168 (404)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCCCCCCCCCCCEEEETTSCEEECCCCCCCSSCCEEEEECTTSCBCCCCSSEEEC---
T ss_pred EEEEEEcCCCeEeeeeEEEEEeccCccccCCCCCeEEccCCcEEEEeCCCCCCCCCeEEEeCCCccccCCCCcEEEc---
Confidence 9999999998875 578899999887644 4466889999999999998 789999999999875443 33343332
Q ss_pred CeEEEEEcccCccC-ceeEEEEEEcCCcceEE---EEEEEEecCCCCCCCCcccceeeccceEEEecCCCCCCCceeEEE
Q psy7042 237 DYIIIFIKEIRKED-AGDYTVNLSNSSGSVSG---TFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHY 312 (2245)
Q Consensus 237 ~~~~L~i~~~~~~d-~G~Y~C~a~n~~g~~~~---~~~l~V~~~p~~~~~~~~~~~~~~~s~~~~w~pp~~~~~~~~~~~ 312 (2245)
....|.|.++..+| +|.|+|.|.|..|.... .+.|.|...+..
T Consensus 169 ~~~~l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~--------------------------------- 215 (404)
T 3p3y_A 169 HNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGV--------------------------------- 215 (404)
T ss_dssp TTSCEEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEECCSCC---------------------------------
T ss_pred CCCcEEEEeeeeccCCcceEEEEEeccccceeccCceeEEEeccCCc---------------------------------
Confidence 22369999999999 59999999998765321 122222211100
Q ss_pred EEEEEecCCCceEEeeeccCcceEEEcCCCCCCEEEEEEEEEecCCCCCCCCCCCceecCCCCCCCCCCCCcEEEeecCC
Q psy7042 313 VVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGD 392 (2245)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~c~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~v~~~~~~ 392 (2245)
T Consensus 216 -------------------------------------------------------------------------------- 215 (404)
T 3p3y_A 216 -------------------------------------------------------------------------------- 215 (404)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeEEEecCCCCCCCCCccEEEEEeeecCCCCcEEEeeeecCCceeecCCcccCceEEEEEEeecCCCCCCCCCCCCcEEe
Q psy7042 393 FVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQI 472 (2245)
Q Consensus 393 ~~~l~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~s~~~~~v~~ 472 (2245)
T Consensus 216 -------------------------------------------------------------------------------- 215 (404)
T 3p3y_A 216 -------------------------------------------------------------------------------- 215 (404)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCcccCCCceecc---ccccccccccceeeEEEEeccCcCeEEEEeCCeecCCCccEEEEeeCCeEEEEEecccccCCc
Q psy7042 473 KDPMAAKAPEIIVP---LRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDAD 549 (2245)
Q Consensus 473 ~~~~~~~~p~~~~~---~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~v~~~d~G 549 (2245)
...+|.+..+ .....+.+|+.+.|.|.+.|.|.+.+.|++++..+........ ..+ ..|.|.++..+|+|
T Consensus 216 ----~~~~p~~~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~-~~~--~~L~i~~~~~~d~G 288 (404)
T 3p3y_A 216 ----AERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFE-NFN--KALRITNVSEEDSG 288 (404)
T ss_dssp ----CCCCCCBSSSCSSEEEEEEETTSCEEEECCBCCSSCCEEEEEETTBCCCTTTEEEE-GGG--TEEEESSCCGGGCE
T ss_pred ----cccCCccccccCCCCCceEecCCCEEEEEEECCCCCCcEEEEECCEECCCCccccc-ccC--ceEEEccCCHhHCE
Confidence 0011111111 1245577899999999999999999999999998876654322 222 28999999999999
Q ss_pred eEEEEEEeCCCCCCcceeEeEecCCCCCCCCCcccceEeeCCCeEEEEEeeeecCCCeEEEEeCCeEeeccCe-EEEEec
Q psy7042 550 EYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGH-FHVETS 628 (2245)
Q Consensus 550 ~Y~C~a~n~~g~~~~~~~l~v~~~p~~~~~p~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~~~~~~~~~~-~~~~~~ 628 (2245)
.|+|.|.|..|.....+.|.|..+|.+...+. ...+.+|+.++|.|.+.|.|.+.++|+++|..+..... ......
T Consensus 289 ~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~---~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~ 365 (404)
T 3p3y_A 289 EYFCLASNKMGSIRHTISVRVKAAPYWLDEPK---NLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVA 365 (404)
T ss_dssp EEEEEEECSSCEEEEEEEEEEEEEEEEEECCC---CEEECTTCCEEEECEEEEESCCEEEEEETTEEGGGSCCCTTEEEE
T ss_pred EEEEEEEeCCCcEEEEEEEEEeCCCeeeccCC---cceeecCCcEEEEEEccccCCCceEEEECCEecCCCCCCceEEec
Confidence 99999999999988899999999887655443 35688899999999999999999999999998865431 111111
Q ss_pred CCeEEEEEcCCCCCcCEEEEEEEEeCCCCceeEEEEEeeC
Q psy7042 629 ERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISD 668 (2245)
Q Consensus 629 ~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~ 668 (2245)
...|.|.++...|.|.|+|.|.|..|..+..+.|.|.+
T Consensus 366 --~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~d 403 (404)
T 3p3y_A 366 --GDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLD 403 (404)
T ss_dssp --TTEEEESSCCSSCCCEEEEEEEETTEEEEEEEEEEEC-
T ss_pred --CCEEEEeecCHHHCEEEEEEEEeCCCcEEEEEEEEEEe
Confidence 24899999999999999999999999999999998864
No 28
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=100.00 E-value=8.9e-35 Score=375.95 Aligned_cols=329 Identities=16% Similarity=0.163 Sum_probs=217.5
Q ss_pred eeeEEecCCeEEEEeeeecCCCCce-----eEecCCccccCCCCcEEEeeecceeEEEEccCCcCCceEEEEEEEcCCcc
Q psy7042 1430 RDITVKAGEDFSIHVPFMAFPQPAA-----FWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGF 1504 (2245)
Q Consensus 1430 ~~~~v~~g~~~~l~c~~~~~p~~~~-----~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~c~a~n~~g~ 1504 (2245)
.++.+.+|+.++|.|.+.| |.|.+ .|+|++..+.. .....|.|.+++. |+| |+|.|.+..+.
T Consensus 7 ~~~~v~~G~~v~L~C~~~g-p~p~~~~~~~~w~k~~~~~~~----------~~~~~l~i~~v~~-d~g-Y~C~a~~~~~~ 73 (450)
T 1z7z_I 7 SKVILPRGGSVLVTCSTSC-DQPMLLGIETPLPKKELLLPG----------NNRKVYELSNVQE-DSQ-PMCYSNCPDGQ 73 (450)
T ss_dssp SEEEEETTEEEEEEEECCS-SCCCEEEECSSSCEEECCSST----------TTEEEEEEEEECS-CBC-CEEEEEETTEE
T ss_pred CceEEecCCcEEEEEEccC-CCcccccccceeeecceEecC----------CCceEEEEEeccc-CCe-eEEEEeCCCCc
Confidence 4688999999999999999 88888 99998875542 2234899999988 999 99999877777
Q ss_pred eeeEEEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccchhccccccCcccccCCeEEEEecCCCCCCCCccceE
Q psy7042 1505 DTATLHSRLRTLPDSVNPRCHLPSSTSKERPKFPTHPNHQPWLKWARASLTSKGVDSTEDSISLVWSKPRHDGGSPIQRY 1584 (2245)
Q Consensus 1505 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~w~~p~~~~~~~i~~~ 1584 (2245)
.+..+.|.|...|..+.. .+. ......++.+.|.|...
T Consensus 74 ~~~~~~l~V~~~P~~~~~-----------------~~~--------------~~~v~~G~~v~L~C~~~----------- 111 (450)
T 1z7z_I 74 STAKTFLTVYWTPERVEL-----------------APL--------------PSWQPVGKNLTLRCQVE----------- 111 (450)
T ss_dssp EEEECEEEEEBCCSEEEE-----------------CCC--------------CSEECTTSEEEEEEEEE-----------
T ss_pred ceeEEEEEEEeCCCccee-----------------cCC--------------CceEeeCCeEEEEEEec-----------
Confidence 777788888775432100 000 00122345566766532
Q ss_pred EEEEEecCCccceEeeccccCCccceEEEEeecCccCCCCCCccceeeEeeeCCeeeEEeccceeeeceEEEeccCCCCe
Q psy7042 1585 IVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGND 1664 (2245)
Q Consensus 1585 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 1664 (2245)
+.+.+....+.||+||+++...... .......|.|.++..+|.
T Consensus 112 ------------------g~~~~~~~~v~W~k~g~~l~~~~~~-------------------~~~~~~~L~i~~~~~~d~ 154 (450)
T 1z7z_I 112 ------------------GGAPRANLTVVLLRGEKELKREPAV-------------------GEPAEVTTTVLVRRDHHG 154 (450)
T ss_dssp ------------------CCBCGGGEEEEEEETTEEEEEEECC-------------------TTTEEEEEEEECCSSCSS
T ss_pred ------------------CCCCCcCcEEEEeeCCEEeeccccc-------------------ccccceEEEEEeeccccC
Confidence 1111111258999999987532210 011124899999999999
Q ss_pred EEEEEEEEcCCCcCCCCCc---CcceEEeeec-CCCCCceeccCCceEEcCCCeEEEEEEecCc-C--CCeEEEeeCCEe
Q psy7042 1665 YEFRIIAVNAIGKSEPSIC---TTPVKICEFV-GGEKPDFIVPLKDLVVPLGKLLTLQCEATGT-P--VPKCRWLRNGRE 1737 (2245)
Q Consensus 1665 g~y~c~a~n~~g~~~~~~~---~~~v~~~~~~-~~~~p~~~~~~~~~~~~~G~~v~L~C~~~~~-p--~~~v~W~~~~~~ 1737 (2245)
|.|+|.|.|..|....... .....+.... ...+|.+..+ ..+.+|+.+.|.|.+.|. | .+.+.|++++..
T Consensus 155 G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~~~~~p~~~~~---~~v~~G~~v~l~C~~~g~~P~~~~~~~W~~~~~~ 231 (450)
T 1z7z_I 155 ANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSP---RVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQR 231 (450)
T ss_dssp CEEEEEEEEECGGGTSCEEEEECCCEECEECCCCSSCCEEECC---SEEETTSEEEEEEEEESCTTGGGCEEEEEETTEE
T ss_pred ceEEEEEEcccCCCCceEEeeccCccceeeeccCCCCCEecCc---eeEEeCCcEEEEEEeeCCCCCCceEEEEeCCCEe
Confidence 9999999999875432110 0111111111 1233444322 678999999999999988 6 689999999998
Q ss_pred ccCCceEEEEecCcEEEEEEeeeccCCCe--EEEEEEecCceeeEEEEEEEecC--CCccccCCCceEEcCCCeEEEEEE
Q psy7042 1738 ISSGARYRVETAGGVFRLHFNEVTDVDNG--DYTCEAYNSVGFAHTSSRVKIGT--PPRIDRMPNALYIPEGDNTKVKIF 1813 (2245)
Q Consensus 1738 l~~~~~~~~~~~~~~~~L~i~~v~~~d~G--~Y~C~~~n~~g~~~~~~~l~V~~--~p~~~~~~~~~~~~~g~~~~l~C~ 1813 (2245)
+.. ++....+.....+ +.+++.+|+| .|+|.+.|..|.....+.|.|.. +|.+.. ....+.+|+.+.|.|.
T Consensus 232 ~~~--~~~~~~~~~~~~~-~~~v~~~d~G~~~Y~C~a~n~~g~~~~~~~l~V~~~~~p~i~~--~~~~v~~G~~v~l~C~ 306 (450)
T 1z7z_I 232 LNP--TVTYGNDSFSAKA-SVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPAPNVIL--TKPEVSEGTEVTVKCE 306 (450)
T ss_dssp CCC--EEEEETTEEEEEE-EEECCGGGCEEEEEEEEEEETTEEEEEEEEEEEECCCCCEEEE--SCSEEETTCEEEEEEE
T ss_pred CCc--eEEecCCceeEEE-EEEeEhhhCCcEEEEEEEccCCccEEEEEEEEEecCCCCeEec--CCeeEeCCCcEEEEEe
Confidence 865 3333222211112 2278999999 99999999999988889998887 555543 3458999999999999
Q ss_pred EeccCCcEEEEEECCEEeecCCceEEEEcCCeEEEEEcccCcccceEEEEEEEcCCe
Q psy7042 1814 YAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSG 1870 (2245)
Q Consensus 1814 ~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g 1870 (2245)
+. |.+.++| +|..+... +....|.|..+..+|+|.|+|.|.|..|
T Consensus 307 ~~--p~p~i~W--~g~~~~~~--------~~~~~L~i~~~~~~d~G~Y~C~a~n~~~ 351 (450)
T 1z7z_I 307 AH--PRAKVTL--NGVPAQPL--------GPRAQLLLKATPEDNGRSFSCSATLEVA 351 (450)
T ss_dssp C----------------------------CCCCCEEEECCGGGTTCEEEEEEEEEET
T ss_pred cC--CCCEeEE--CCEEcCCC--------CceEEEEEecCcccCCceEEEEEEcCCC
Confidence 98 8899999 77776221 1223799999999999999999997654
No 29
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=100.00 E-value=4.9e-35 Score=370.77 Aligned_cols=357 Identities=21% Similarity=0.338 Sum_probs=276.2
Q ss_pred CCceecCCcc-eEEeCCCeEEEEEEEeeecCCceEEEE-CCeeccCCCeEEEEEcCcEEEEEEeeeccCC------CeEE
Q psy7042 90 KPDFIVPLKD-LVVPLGKLLTLQCEATGTPVPKCRWLR-NGREISSGARYRVETAGGVFRLHFNEVTDVD------NGDY 161 (2245)
Q Consensus 90 ~P~~~~~~~~-~~v~~G~~v~L~C~~~g~p~~~i~W~~-~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d------~G~Y 161 (2245)
+|.|+..|.+ +.+.+|+.++|.|.+.|.|.|+|.|+| ||..+....++.....++ +|.|.+++.+| +|.|
T Consensus 3 ~P~f~~~p~~~~~~~~G~~v~l~C~~~g~p~p~v~W~k~~g~~~~~~~~~~~~~~~~--~L~i~~~~~~d~~~~~d~G~Y 80 (388)
T 2v5m_A 3 GPVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQISSDG--KLVFPPFRAEDYRQEVHAQVY 80 (388)
T ss_dssp EEEEEECCCSEEEEETTTCEEEECEEEEESCCEEEEEETTSCBCCCBTTTBEECSTT--EEEECCCCGGGCCHHHHEEEE
T ss_pred CCchhhCCCceEEEEcCccEEEEEECCCCCCCEEEEEcCCCCccccCCCceEEcCCc--eEEecccChhhccccccCceE
Confidence 7889888776 568899999999999999999999999 888887544433333444 49999999987 9999
Q ss_pred EEEEEcCcccce-eEEEEEecCCCeeecCCCceEEcCCCeEEEEEEEecCCC---ceEEEeeCceeeec-----CCceEE
Q psy7042 162 TCEAYNSVGFAH-TSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQP---MEVSLTKNGRVVQS-----DDRFKF 232 (2245)
Q Consensus 162 ~C~a~n~~g~~~-~~~~l~V~~~P~~~~~~~~~~v~~G~~~~l~C~~~g~p~---~~i~W~~~g~~l~~-----~~~~~~ 232 (2245)
+|.|.|..|... ..+.|.|..+|.+...+....+.+|+.++|.|.+.+.|. +.+.|++++..+.. ..++.+
T Consensus 81 ~C~a~n~~g~~~s~~~~v~v~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~ 160 (388)
T 2v5m_A 81 ACLARNQFGSIISRDVHVRAVVAQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAEYDGKYLV 160 (388)
T ss_dssp EEEEEETTEEEECCCEEEEEECCCCCCCBCCCEEEETTSCEEECCBCCTTTTTTEEEEEEEETTCCEECSSSCBTTTEEE
T ss_pred EEEEEccCCeEEecceEEEEccccccccCccceeeecCCcEEEEEECcCCCCCCcceEEEEeCCCcccccccCCCCcEEE
Confidence 999999998753 477889989998888888899999999999999987653 78999999987743 223333
Q ss_pred EEeCCeEEEEEcccCccCc-eeEEEEEEcCCcceEE-E---EEEEEecCCCCCCCCcccceeeccceEEEecCCCCCCCc
Q psy7042 233 TVLDDYIIIFIKEIRKEDA-GDYTVNLSNSSGSVSG-T---FTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGL 307 (2245)
Q Consensus 233 ~~~~~~~~L~i~~~~~~d~-G~Y~C~a~n~~g~~~~-~---~~l~V~~~p~~~~~~~~~~~~~~~s~~~~w~pp~~~~~~ 307 (2245)
.. ...|.|.++..+|+ |.|+|.|.|..+.... . ..|.|..++...
T Consensus 161 ~~---~~~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~--------------------------- 210 (388)
T 2v5m_A 161 LP---SGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSS--------------------------- 210 (388)
T ss_dssp CT---TSCEEESSCCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCSCE---------------------------
T ss_pred cc---CCcEEEecCCccccCeeEEEEeccCCCCceeeccccceEEEecCCcCC---------------------------
Confidence 22 23699999999999 9999999987543211 1 122221110000
Q ss_pred eeEEEEEEEEecCCCceEEeeeccCcceEEEcCCCCCCEEEEEEEEEecCCCCCCCCCCCceecCCCCCCCCCCCCcEEE
Q psy7042 308 KVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVT 387 (2245)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~c~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~v~ 387 (2245)
T Consensus 211 -------------------------------------------------------------------------------- 210 (388)
T 2v5m_A 211 -------------------------------------------------------------------------------- 210 (388)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eecCCeeEEEecCCCCCCCCCccEEEEEeeecCCCCcEEEeeeecCCceeecCCcccCceEEEEEEeecCCCCCCCCCCC
Q psy7042 388 QVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSAS 467 (2245)
Q Consensus 388 ~~~~~~~~l~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~s~~~ 467 (2245)
T Consensus 211 -------------------------------------------------------------------------------- 210 (388)
T 2v5m_A 211 -------------------------------------------------------------------------------- 210 (388)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcEEecCCcccCCCceeccccccccccccceeeEEEEeccCcCeEEEEeCCeecC------CCccEEEEeeCCeEEEEEe
Q psy7042 468 NSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREIT------PSARHHIFAEGDTYTLIIN 541 (2245)
Q Consensus 468 ~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~i~------~~~~~~~~~~~~~~~L~i~ 541 (2245)
.+..|.+. .....+.+|+.+.|.|.+.|.|.+.+.|+|++..+. ...++.. .+. .|.|.
T Consensus 211 ---------~p~~~~~~--~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~--~~~--~L~i~ 275 (388)
T 2v5m_A 211 ---------APRTPALV--QKPLELMVAHTISLLCPAQGFPAPSFRWYKFIEGTTRKQAVVLNDRVKQ--VSG--TLIIK 275 (388)
T ss_dssp ---------EEECCSSC--CCCEEEETTSCEEECCCCEEESCCEEEEEEECTTSSCEEECCCSSSEEE--ETT--EEEES
T ss_pred ---------CCcCcccc--CCceEEeeCCcEEEEEECCCCCCCEEEEEecCCCCcccccccccCceec--ccC--EEEEC
Confidence 00001111 112345679999999999999999999999854332 2233322 222 89999
Q ss_pred cccccCCceEEEEEEeCCCCCCcceeEeEecCCCCCCCCCcccceEeeCCCeEEEEEeeeecCCCeEEEEeCCeEeeccC
Q psy7042 542 SVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGG 621 (2245)
Q Consensus 542 ~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~~~p~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~~~~~~~~~ 621 (2245)
++..+|+|.|+|.|.|..|.....+.|.|..+|.+...| ....+..|+.++|.|.+.|.|.+.|+|+++|..+..+
T Consensus 276 ~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~---~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~i~~~- 351 (388)
T 2v5m_A 276 DAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAKIDP---PTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHS- 351 (388)
T ss_dssp SCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEEEES---SEEEECTTSCEEEEEEEEEECCCEEEEEETTEECSCC-
T ss_pred cCCHHHCeEEEEEEecCCCceeEEEEEEEeCCCccccCC---CcEEecCCCCEEEEEEeccccCCeEEEEECCEECccC-
Confidence 999999999999999999998888999999887765444 2456889999999999999999999999999887543
Q ss_pred eEEEEecCCeEEEEEcCCCCCcCEEEEEEEEeCCCCceeEEEEEe
Q psy7042 622 HFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQI 666 (2245)
Q Consensus 622 ~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v 666 (2245)
...|.|.++...|.|.|+|.|.|..|..+..+.|.|
T Consensus 352 ---------~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 387 (388)
T 2v5m_A 352 ---------ESVLRIESVKKEDKGMYQCFVRNDRESAEASAELKL 387 (388)
T ss_dssp ---------SSEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred ---------CCEEEEecCChhhCEEEEEEEEcCCCcEEEEEEEEe
Confidence 358999999999999999999999999999988876
No 30
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}
Probab=100.00 E-value=1.5e-35 Score=397.54 Aligned_cols=536 Identities=16% Similarity=0.174 Sum_probs=363.4
Q ss_pred eEeeCCCeEEEEEeee-------ecCCCeEEEEeCCeEeeccCeEEEEecCCeEEEEEcCCCCCcCEEEEEEEEeC--CC
Q psy7042 586 AYFDKGENVVVKIPFT-------GYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAEND--LG 656 (2245)
Q Consensus 586 ~~~~~g~~~~l~C~~~-------g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~--~g 656 (2245)
..+..|++++|.|.+. +.|.+.|.|+++|..+... ++.+ ..+....|+|.++...|. .|.|.+... .+
T Consensus 13 ~~v~~G~~v~l~C~~~~~~~~~~~~~~~~i~W~~~~~~i~~~-~~~~-~~~~~~~l~i~~~~~~~~-~y~C~~~~~~~~~ 89 (589)
T 3l5h_A 13 PVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKE-QYTI-INRTASSVTFTDIASLNI-QLTCNILTFGQLE 89 (589)
T ss_dssp CCCCSSSCCCCCC-CCTTTTTTTTCCTTTCCCBCSSSBSCGG-GCBC-CSSSCCBCCCCCCCSSCC-CCCCC-CCTTCC-
T ss_pred CEEeCCCCEEEEEEEeCccCccccccccceEEEeCCEECChH-Hccc-cCCcEeEEEEecCCCcce-eeEEecccCCCcc
Confidence 4477899999999997 6677899999999777543 2222 234467899999998875 488988742 22
Q ss_pred CceeEEEEEeeCCCCCCCCCeeeeecCCcEEEEeeCCCCCCCcccccEEEEeeeCCCCCeEEE-ceeeeeeEEEe-cCCC
Q psy7042 657 MDSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRV-GNTRFTTMAIT-GLSP 734 (2245)
Q Consensus 657 ~~~~~~~l~v~~~P~~p~~~~~~~~~~~si~lsW~~p~~~~~~~~~~y~v~~~~~~~~~w~~~-~~~~~~~~~i~-~L~p 734 (2245)
.....+.|.+..+|.+|.++.+...+..++.++|.++. +. ..+..|.|+++......+... .......+.+. +|.+
T Consensus 90 ~~~~~~~l~v~~pP~~P~nl~c~~~~~~~~~~~W~~~~-~~-~~~~~y~l~~~~~~~~~~~c~~~~~~~~~c~~~~~l~~ 167 (589)
T 3l5h_A 90 QNVYGITIISGLPPEKPKNLSCIVNEGKKMRCEWDGGR-ET-HLETNFTLKSEWATHKFADCKAKRDTPTSCTVDYSTVY 167 (589)
T ss_dssp CCCCCCCCCC-CCCCCCEEEEEEEETTSCEEEEEECCS-CC-SSCEEEEECCBCSSSBCCCEECBTTBSSCCBCCSCCCS
T ss_pred cEEEeEEEeccCCCCCCEeeEEEECCCceEEEEECCCC-cC-CcCceEEEEEEEcCCCcccCCCCCCCcEEEEECCCCch
Confidence 23455677888999999999999999999999999764 32 357899999875432222111 12223456666 7999
Q ss_pred CCEEEEEEEEEecccCCCCCCCCccEEecCccccccccccccccCCCceeecccccccccCCceEEEEeeeccCcccccc
Q psy7042 735 GHQYEFRVYAENVYGRSDPSTTSDLITTKDTFKKQIKKRQYDFDETGKKIRGKADEKVSDYDQYVFDIYSKYVPQPVDIK 814 (2245)
Q Consensus 735 ~t~y~~~v~a~n~~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 814 (2245)
++.|.|+|.|.|..|.+.... ..+ .+.
T Consensus 168 ~~~Y~~~v~a~n~~G~~~s~~-~~~-~~~--------------------------------------------------- 194 (589)
T 3l5h_A 168 FVNIEVWVEAENALGKVTSDH-INF-DPV--------------------------------------------------- 194 (589)
T ss_dssp SSCEEECEEEEESSCCBCCCC-EEE-CGG---------------------------------------------------
T ss_pred heeEEEEEEEEeCCCCccccc-EEE-ccc---------------------------------------------------
Confidence 999999999999999753221 000 000
Q ss_pred ccceecccccccccccCceeEEEEeeecccCCeeEEEeeccCCchhhhhhheeeeeeeccCCCceEeecccccCCcceEE
Q psy7042 815 TSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVL 894 (2245)
Q Consensus 815 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 894 (2245)
T Consensus 195 -------------------------------------------------------------------------------- 194 (589)
T 3l5h_A 195 -------------------------------------------------------------------------------- 194 (589)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEecCCCCCcccEE--eeeeCceEEEEecCCCCCCCCccceEEEeeeecCCCceEEecc---eeeeceEEEecCCCCc
Q psy7042 895 IFEVLDRPHPPENLHA--DEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSS---YVTTPFVRVRNLAIGS 969 (2245)
Q Consensus 895 ~~~~~~~P~~p~~l~~--~~~~~~~~~l~W~~p~~~~g~~i~~y~i~~~~~~~~~~~~~~~---~~~~~~~~i~~L~p~~ 969 (2245)
....|.||.++.+ .....+++.|+|++|...++ .+.+|.|+|+..+...|..+.. ......+.+.+|.|++
T Consensus 195 ---~~~~p~pP~~~~~~~~~~~~~~v~l~W~~p~~~~~-~~~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~~~i~~L~p~t 270 (589)
T 3l5h_A 195 ---YKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSV-IILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFT 270 (589)
T ss_dssp ---GSEECCCCCSCEEECTTTCTTCEEEECCCCGGGGT-SCEEEEEEEEETTCSCCBCCCTTSSCSCCSEEEECSCCSSC
T ss_pred ---cEEEcCCCceEEEEecCCCCCeEEEEeCCCCCCCe-eeEEEEEEECCCCCCCcEEEccccCcCceeEEEECCCCCCC
Confidence 0036889999988 45788999999999876554 8899999999988778876643 3356789999999999
Q ss_pred eeeEEEEEEeccccCCCccccCcccccCCCCCCC-CCCCCeeE----eecCCeEEEEecCC-CCCCCCccceEEEEEEec
Q psy7042 970 TYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPG-APGAPKGV----DSTEDSISLVWSKP-RHDGGSPIQRYIVEKRLI 1043 (2245)
Q Consensus 970 ~y~~~v~a~n~~g~~~~s~~~~~~~~~t~~~~p~-~p~~~~~~----~~~~~~v~l~W~~p-~~~~~~~i~~y~v~~~~~ 1043 (2245)
.|.|+|+|.|..|.|.++..+..+.+.+.+..|. +|..+... ..+.+++.|.|+++ ....+++|.+|.|.|+..
T Consensus 271 ~Y~~~V~a~~~~g~g~~S~~S~~~~~~T~~~~P~~~p~~~~~v~~~~~~~~~~v~l~W~p~~~~~~~g~i~~Y~v~~~~~ 350 (589)
T 3l5h_A 271 EYVFRIRCMKEDGKGYWSDWSEEASGITYEDRPSKAPSFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRW 350 (589)
T ss_dssp CEEEEEEEEESSSCSCCCCCCCCBCCCCCCCCCCSCCCEEEECCSCSSTTSCCEEEEECCCCTTTSSSCCCEEEEEECCT
T ss_pred EEEEEEEEEeCCCCCccCCCCCccccccCccCCCCCCcEEEEeecCcCCCcceEEEEEeeCCchhccCceeeEEEEEecC
Confidence 9999999999999999988888888888888885 66654433 45679999999973 334455799999999765
Q ss_pred CCccceeccccccCCcceeEEEEeecccccCCccCchhhhhhhhhcccccccccccCCcEEEEEEEEEecCCCCCCCCCC
Q psy7042 1044 SDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSS 1123 (2245)
Q Consensus 1044 ~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~v~A~n~~G~~~~s~~~ 1123 (2245)
+. .+..... .. ..+..|.+++.|.|+|+|.|..|.|+++...
T Consensus 351 ~~-~~~~~~~-----~~--------------------------------~~~~~l~~~~~Y~~~V~A~n~~G~~~~s~~~ 392 (589)
T 3l5h_A 351 KS-HLQNYTV-----NA--------------------------------TKLTVNLTNDRYLATLTVRNLVGKSDAAVLT 392 (589)
T ss_dssp TS-CCCBCCC-----SS--------------------------------SCCEECCCSSCCCEEEEEEBTTBCCCCCCCC
T ss_pred CC-Cceeecc-----CC--------------------------------ceEEEEeCCCCEEEEEEEEeCCccCCCeEEE
Confidence 43 2221110 00 0355588999999999999999999877533
Q ss_pred cceeecCCCCCCccccCCCceeEEEEcCCeEEEEEEeeecCC----CcceEEeCCeecCCCCcEEEEEccceEEEEecCc
Q psy7042 1124 DIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPK----PTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSA 1199 (2245)
Q Consensus 1124 ~~~~~~~~p~~p~~~~~~~~~~~~v~~~~~~~l~~~~~~~p~----~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 1199 (2245)
.. ....++.+| +.++.+... ...+.+.|..... ..|.|...+...................+.+..
T Consensus 393 ~~-~~~~~~~~p-------~~~l~~~~~-~~si~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 462 (589)
T 3l5h_A 393 IP-ACDFQATHP-------VMDLKAFPK-DNMLWVEWTTPRESVKKYILEWCVLSDKAPCITDWQQEDGTVHRTYLRGN- 462 (589)
T ss_dssp CC-CTTCCCCSC-------CCSCEEEEC-SSSEEEECCCCSSCCSCBCCEEEEECSSSCCCEEECCBCSSCCEEECCSC-
T ss_pred ee-cccccCCCC-------cceEEEEEC-CCeEEEEEECCCCCccEEEEEEEECCCCCCCccCcEEeeCCcceEEehhc-
Confidence 22 111111122 123333333 2356777755422 235565543321100001111112222333333
Q ss_pred cccccceeEEEE--EEcCCcceeEEEEEEEECC---CCCCCCCceeeeccCCcEEEEecCCC-CCCCcceeeeEEEEeec
Q psy7042 1200 KRATDSGSYTIQ--LVNTVGSDSASCKVYVVDK---PSPPQGPLDVSDITPESCSLSWKPPL-DDGGSPITNYVVEKYES 1273 (2245)
Q Consensus 1200 ~~~~~~~~Y~~~--a~n~~g~~~~s~~~~v~~~---p~~p~~~~~~~~~~~~s~~l~W~~p~-~~~g~~i~~Y~v~~~~~ 1273 (2245)
|.+...|.+. |.|..|.++.+. +.+.+. |.+|+ .+.+...+.+++.|+|++|. ...++.|.+|.|+|...
T Consensus 463 --L~p~t~Y~~~V~A~~~~g~g~~~~-~~~~t~~~~P~~pp-~l~~~~~~~~sv~l~W~~~~~~~~~g~i~~Y~v~~~~~ 538 (589)
T 3l5h_A 463 --LAESKCYLITVTPVYADGPGSPES-IKAYLKQAPPSKGP-TVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTI 538 (589)
T ss_dssp --CCSSSEEEEEECBEETTEECCCEE-EEEESSCCCCSSCC-CCCEECCCSSCBEEBCCCCCHHHHCSCEEEEEECCBCS
T ss_pred --cccCcEEEEEEEEEeCCcccCCEE-EEEEeccCCCCCCC-eEEEeecccceEEEEecCCCHHHcCccceeEEEEEEeC
Confidence 4677777554 568888776543 444443 44443 58888889999999999853 22344599999998876
Q ss_pred cccceEEcccceecceEEecCCCCCceEEEEEEEeccccCCCCc
Q psy7042 1274 ATGFWSKLSSFVRSPAYDVFGLETNRQYRFRVRAENQYGVSEPL 1317 (2245)
Q Consensus 1274 ~~~~~~~~~~~~~~~~~~l~~L~~~t~Y~~~v~A~n~~G~~~~s 1317 (2245)
.+..+ ........+++.|.+|.+++.|.|+|+|.|.+| |.++
T Consensus 539 ~~~~~-~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~G-~~~S 580 (589)
T 3l5h_A 539 IGNET-AVNVDSSHTEYTLSSLTSDTLYMVRMAAYTDEG-GKDG 580 (589)
T ss_dssp SCCCC-CEEECTTCCBCCBCSCCSSCCEECCEEEEETTE-EEEC
T ss_pred CCCeE-EEEeCCcccEEEecCCCCCCEEEEEEEEEeCCC-CCCC
Confidence 55554 333456778899999999999999999999999 6543
No 31
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=100.00 E-value=1.1e-32 Score=369.22 Aligned_cols=491 Identities=16% Similarity=0.135 Sum_probs=332.0
Q ss_pred CCcCEEEEEEEEeCCCCceeEEEEEeeCCCCCC-CCCeeeeecCCcEEEEeeCCCCCCCcccccEEEEeeeCCC------
Q psy7042 641 NVDTAPYRVVAENDLGMDSAIVKIQISDRPDPP-QFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPM------ 713 (2245)
Q Consensus 641 ~~d~g~y~C~a~n~~g~~~~~~~l~v~~~P~~p-~~~~~~~~~~~si~lsW~~p~~~~~~~~~~y~v~~~~~~~------ 713 (2245)
.+..|.+.| +.|..|..=..-...+.+.|.+| .++.+..++.+++.|+|++|..+++.++. |.|+|+....
T Consensus 132 ~~c~g~~~C-c~n~cG~~C~~P~~~~~~~P~~P~~~l~v~~~~~~sv~l~W~pp~~~~~~~i~-Y~V~~r~~~g~~~~~~ 209 (680)
T 1zlg_A 132 NECSGVKKC-CSNGCGHTCQVPKTLYKGVPLKPRKELRFTELQSGQLEVKWSSKFNISIEPVI-YVVQRRWNYGIHPSED 209 (680)
T ss_pred ccCCCcccc-ccccccccccccceeeecccccccccceEEeccCceEEEEEeCCCCCCCCCEE-EEEEEEECCCCCcCcc
Confidence 345677777 56777764222223357789989 89999999999999999987555566777 9999987632
Q ss_pred --CCeEEEceeeeeeEEEecCCCCCEEEEEEEEEecccCCCCCCCCccEEecCccccccccccccccCCCceeecccccc
Q psy7042 714 --SSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDTFKKQIKKRQYDFDETGKKIRGKADEK 791 (2245)
Q Consensus 714 --~~w~~~~~~~~~~~~i~~L~p~t~y~~~v~a~n~~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 791 (2245)
..|..+.......++|.+|.|++.|.|+|.|.|..|.+.++..+..+.+..
T Consensus 210 ~~~~w~~v~~~~~~~~~i~~L~P~t~Y~frV~A~n~~G~~~~ss~s~~~~t~~--------------------------- 262 (680)
T 1zlg_A 210 DATHWQTVAQTTDERVQLTDIRPSRWYQFRVAAVNVHGTRGFTAPSKHFRSSK--------------------------- 262 (680)
T ss_pred ccCceEEEEecCCCeEEeCCCCCCCEEEEEEEEEeCCCCCCCCCCccceEcCC---------------------------
Confidence 578877665567899999999999999999999999544433222211110
Q ss_pred cccCCceEEEEeeeccCccccccccceecccccccccccCceeEEEEeeecccCCeeEEEeeccCCchhhhhhheeeeee
Q psy7042 792 VSDYDQYVFDIYSKYVPQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIM 871 (2245)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 871 (2245)
T Consensus 263 -------------------------------------------------------------------------------- 262 (680)
T 1zlg_A 263 -------------------------------------------------------------------------------- 262 (680)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eccCCCceEeecccccCCcceEEEEEEecCCCCCcccEEeee--eCc---eEEEEecCCCCCCCCccceEEEeeeec---
Q psy7042 872 NQLHHPKLINLHDAFEDDDEMVLIFEVLDRPHPPENLHADEF--AGD---SLTLYWTPPRDNGGSEITNYVVEKKDY--- 943 (2245)
Q Consensus 872 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~p~~l~~~~~--~~~---~~~l~W~~p~~~~g~~i~~y~i~~~~~--- 943 (2245)
...+|.+|.++.+... +.+ ++.|+|++|.+.++ +|.+|.|+|...
T Consensus 263 --------------------------~~~pp~~P~~l~~~~~~~~~~g~~sv~l~W~pP~~~~g-~i~~Y~V~~~~~~~~ 315 (680)
T 1zlg_A 263 --------------------------DPSAPPAPANLRLANSTVNSDGSVTVTIVWDLPEEPDI-PVHHYKVFWSWMVSS 315 (680)
T ss_pred --------------------------CCCCCCCCCceEeeeeeecCCCceEEEEEecCCCCCCC-ceeEEEEEEEecccc
Confidence 0137889999999887 778 99999999876664 999999999832
Q ss_pred ----CCCceEEecceeeeceEEEecCCCCceeeEEEEEEeccccCCCccccCcccccCCCCCCCCCCCCeeEeecCCeEE
Q psy7042 944 ----NSTVWTKVSSYVTTPFVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSIS 1019 (2245)
Q Consensus 944 ----~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~s~~~~~~~~~t~~~~p~~p~~~~~~~~~~~~v~ 1019 (2245)
....|.........+.++|.+|.|++.|.|+|.|.|..|.|+++.....+.+.|....|. |.++.+...+.+++.
T Consensus 316 ~~~~~~~~~~~~~v~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~v~~~T~~~~P~-p~~l~~~~~s~tsi~ 394 (680)
T 1zlg_A 316 KSLVPTKKKRRKTTDGFQNSVILEKLQPDCDYVVELQAITYWGQTRLKSAKVSLHFTSTHATNN-KEQLVKTRKGGIQTQ 394 (680)
T ss_pred cccCCccceEEEEEcCCeeEEEeCCCCCCCEEEEEEEEEECCCcCCCCCCceeEEEECCCCCCC-ccccccccccCcccc
Confidence 122466655555668899999999999999999999999998875444477788888887 888998888888887
Q ss_pred E-----------EecCCCCCCCCccceEEEEEEecCCccceeccccccCCcceeEEEEeecccccCCccCchhhhhhhhh
Q psy7042 1020 L-----------VWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLL 1088 (2245)
Q Consensus 1020 l-----------~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 1088 (2245)
| +|.+|...++ +.+|.|.|...++... ....+.|....-........... ....
T Consensus 395 lp~~~~~~~~~l~W~~P~~~~~--~~~y~v~w~~~~~~~v-----------~~Y~V~w~~~~~~~~~~~~~~~~--~~~~ 459 (680)
T 1zlg_A 395 LPFQRRRPTRPLEVGAPFYQDG--QLQVKVYWKKTEDPTV-----------NRYHVRWFPEACAHNRTTGSEAS--SGMT 459 (680)
T ss_pred ccccccCCCccccccCCcccCC--cceEEEEEeCCCCCcc-----------ceEEEEEeeeecccCCCCcceee--eeec
Confidence 7 9999874432 6789999986553210 11123332110000000000000 0000
Q ss_pred cccccccccccCCcEEEEEEEEEecCCCCCCCCCCcceeec--CCCCCCccccCCCceeEEEEcCCeEEEEEEeeecCCC
Q psy7042 1089 MFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSDIIMCC--APPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKP 1166 (2245)
Q Consensus 1089 ~~~~~~i~~L~~~~~Y~~~v~A~n~~G~~~~s~~~~~~~~~--~~p~~p~~~~~~~~~~~~v~~~~~~~l~~~~~~~p~~ 1166 (2245)
..+.++|.+|.+++.|.|+|+|.|..|.+.... ..+.+.. ..+.+| ...+.|....
T Consensus 460 ~~~~~~l~~L~p~t~Y~~~V~A~n~~G~s~~~~-~~f~T~~~~~~~~~~-----------------~~~v~~~~~~---- 517 (680)
T 1zlg_A 460 HENYIILQDLSFSCKYKVTVQPIRPKSHSKAEA-VFFTTPPCSALKGKS-----------------HKPIGCLGEA---- 517 (680)
T ss_pred cCceEEecCCCCCCeEEEEEEEecCCCCCCccc-cceeCCCccccccCC-----------------ccccccCCCC----
Confidence 112347999999999999999999999764111 1111100 000000 0000010000
Q ss_pred cceEEeCCeecCCCCcEEEEEccceEEEEecCccccccceeEEEEEEcCCcceeEEEEEEEECCCCCCCCC----ceeee
Q psy7042 1167 TPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGP----LDVSD 1242 (2245)
Q Consensus 1167 ~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~a~n~~g~~~~s~~~~v~~~p~~p~~~----~~~~~ 1242 (2245)
| +.+. ..+.+ |.+ +.+..
T Consensus 518 --------------------------------------------------~--P~~~-----~v~~~-P~~l~~~v~v~~ 539 (680)
T 1zlg_A 518 --------------------------------------------------G--HVLS-----KVLAK-PENLSASFIVQD 539 (680)
T ss_pred --------------------------------------------------c--cccc-----cccCC-ccccceeEEEec
Confidence 0 0000 00122 234 55556
Q ss_pred ccCCcEEEEecCCCCCCCcceeeeEEEEeeccccc----eEEc------ccceecceEEecCCCCCceEEEEEEEecccc
Q psy7042 1243 ITPESCSLSWKPPLDDGGSPITNYVVEKYESATGF----WSKL------SSFVRSPAYDVFGLETNRQYRFRVRAENQYG 1312 (2245)
Q Consensus 1243 ~~~~s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~~----~~~~------~~~~~~~~~~l~~L~~~t~Y~~~v~A~n~~G 1312 (2245)
.+.+ +.|+|++|....++.|.+|.|+|.....+. +... ....+.+++.|.+|+|++.|.|+|+|.|.+|
T Consensus 540 ~~~t-i~lsW~pP~~~~ng~I~gY~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G 618 (680)
T 1zlg_A 540 VNIT-GHFSWKMAKANLYQPMTGFQVTWAEVTTESRQNSLPNSIISQSQILPSDHYVLTVPNLRPSTLYRLEVQVLTPGG 618 (680)
T ss_pred cCce-EEEEecCCCCCCCCCceeEEEEEEEccCCCccccccceeeecccccCCcccEEEecCCCCCceEEEEEEEEcCCC
Confidence 5655 999999987543456999999987653322 1110 1123567899999999999999999999999
Q ss_pred CCCCcccCCcccccCCCCCCCCCCCCeeeeccCCcEEEEeeCCCCCCCccceeeEEEEec
Q psy7042 1313 VSEPLELDNSITAKFPFTVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKT 1372 (2245)
Q Consensus 1313 ~~~~s~~~~~~~~~~~~~~p~~p~~~~~~~~~~~s~~l~W~~p~~~~g~~i~~y~i~~~~ 1372 (2245)
.|++ ..+...++...|.+|..+.+.... .|+|.+|..++|.+|.+|.+.|.-
T Consensus 619 ~G~~----~~~~~~T~~~~P~~P~~l~v~~~~----~l~W~pP~~~~G~~I~~~~~~~~~ 670 (680)
T 1zlg_A 619 EGPA----TIKTFRTPELPPSSAHRSHLKHRH----PHHYKPSPERYGKPIPNPLLGLDS 670 (680)
T ss_pred cCCC----cceEEECCCCCCCCCCCCeEEecc----ceeECCCCCCCCCccceeeEEEee
Confidence 9985 234455666788888888887654 899999999999999999999873
No 32
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=100.00 E-value=4.5e-33 Score=355.08 Aligned_cols=272 Identities=23% Similarity=0.423 Sum_probs=216.1
Q ss_pred CceeccCCceEEcCCCeEEEEEEecCcCCCeEEEeeCCEeccC---CceEEEEecCcEEEEEEeeeccCCCeEEEEEEec
Q psy7042 1698 PDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISS---GARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYN 1774 (2245)
Q Consensus 1698 p~~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~~~~l~~---~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n 1774 (2245)
|.+...+....+.+|+++.|.|.+.+.|.+.+.|++++..+.. ..+......+ .|.|.+++.+|+|.|+|.+.|
T Consensus 122 ~~~~~~~~~~~~~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~~~n 198 (403)
T 3laf_A 122 LRFLSQTESITAFMGDTVLLKCEVIGDPMPTIHWQKNQQDLNPIPGDSRVVVLPSG---ALQISRLQPGDSGVYRCSARN 198 (403)
T ss_dssp CEECSCCCCEEEETTSCEEECCCEECSSCCEEEEEESSSBCCCCTTCCSEEECTTS---CEEECSCCGGGCEEEEEEEEC
T ss_pred CccccCCCcEEEEcCCeEEEEEEEcccCCCeEEEEECCEeccccCCceEEEEcCCc---eEEEcccccccCEEEEEEEEc
Confidence 3444445567888999999999999999999999999988742 3333333222 499999999999999999999
Q ss_pred CceeeE-EEEEEEecCCCc------cccCCCceEEcCCCeEEEEEEEeccCCcEEEEEECCEEeecCCceEEEEcCCeEE
Q psy7042 1775 SVGFAH-TSSRVKIGTPPR------IDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYII 1847 (2245)
Q Consensus 1775 ~~g~~~-~~~~l~V~~~p~------~~~~~~~~~~~~g~~~~l~C~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~ 1847 (2245)
..|... ....+.|..+|. +...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+........... ...
T Consensus 199 ~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~--~~~ 276 (403)
T 3laf_A 199 PASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCVSGYPPPSFTWLRGEEVIQLRSKKYSLLG--GSN 276 (403)
T ss_dssp SSCCCBCCCEEEEEECCCCCCEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCSSSSEEEET--TTE
T ss_pred CCCceeccceeEEEecCCCcccCceEecCCCceEecCCCcEEEEEEcCCCCCCeEEEEECCeeccCCCceEEECC--ccE
Confidence 877533 457777766653 34466778889999999999999999999999999998865443222222 237
Q ss_pred EEEcccCcccceEEEEEEEcCCeeeEEEEEEEEeCCCCCCCCCceecccccceEEEEecCCCCCCCeeeeEEEEEEEcCC
Q psy7042 1848 IFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDIS 1927 (2245)
Q Consensus 1848 l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~ 1927 (2245)
|.|.++..+|+|.|+|.|.|..|..+..+.|.|..+
T Consensus 277 L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~-------------------------------------------- 312 (403)
T 3laf_A 277 LLISNVTDDDSGTYTCVVTYKNENISASAELTVLVP-------------------------------------------- 312 (403)
T ss_dssp EEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEE--------------------------------------------
T ss_pred EEEeCCCHHHCEEEEEEEEcCCCceEEEEEEEEECC--------------------------------------------
Confidence 999999999999999999999887777666655311
Q ss_pred CCceEEEeeecCcceEEecCCCCCCeEEEEEEEECCCCCCCCCCCcCceeccCCCCCCCCCCCcEEEEEcCCeEEEEEec
Q psy7042 1928 MPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDK 2007 (2245)
Q Consensus 1928 ~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~~~a~n~~g~~~~s~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~v~l~W~~ 2007 (2245)
T Consensus 313 -------------------------------------------------------------------------------- 312 (403)
T 3laf_A 313 -------------------------------------------------------------------------------- 312 (403)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCCceeEEEEEEeeecCccceEEEEEEeccceEEeCCCcCCceEEEEEEEEeccccCCCcCCCCcccccCcccCCC
Q psy7042 2008 PLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKA 2087 (2245)
Q Consensus 2008 p~~~~~~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~s~~v~~~~~~~~~~ 2087 (2245)
T Consensus 313 -------------------------------------------------------------------------------- 312 (403)
T 3laf_A 313 -------------------------------------------------------------------------------- 312 (403)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceEEeeccceeeecCccEEEEEEEEeeCCCeEEEeeCCEeeCCCCcEEEEEeCcEEEEEEcCCCCCCCeEEEEEEEeCCc
Q psy7042 2088 PEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGG 2167 (2245)
Q Consensus 2088 p~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G 2167 (2245)
|.+...+.+..+.+|+.++|.|.+.|.|.|.|.|+|+|..+..+.++.+..++ .|.|.++..+|+|.|+|.|.|.+|
T Consensus 313 p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~---~L~i~~v~~~d~G~Y~C~a~N~~G 389 (403)
T 3laf_A 313 PWFLNHPSNLYAYESMDIEFECAVSGKPVPTVNWMKNGDVVIPSDYFQIVGGS---NLRILGVVKSDEGFYQCVAENEAG 389 (403)
T ss_dssp EEEEECCCCEECCTTCCEEECCEEEEESCCEEEEEETTEECCCSSSEEEETTT---EEEESSCCGGGCEEEEEEEEETTE
T ss_pred CcEeecCcceEEecCCeEEEEEEEeeccCCEEEEEECCEECCCCCcEEEecCc---cEEEeccccccCEEEEEEEEcCCc
Confidence 22222223345678999999999999999999999999999888877766555 799999999999999999999999
Q ss_pred eeeEEEEEEEEcCC
Q psy7042 2168 VKSTKAELIIMTAP 2181 (2245)
Q Consensus 2168 ~~~~~~~l~V~~~p 2181 (2245)
..+.++.|.|..+|
T Consensus 390 ~~~~~~~l~V~~P~ 403 (403)
T 3laf_A 390 NAQSSAQLIVPKPA 403 (403)
T ss_dssp EEEEEEEEECCCC-
T ss_pred eEEEEEEEEEeCCC
Confidence 99999999997654
No 33
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=100.00 E-value=4.6e-32 Score=326.07 Aligned_cols=279 Identities=24% Similarity=0.428 Sum_probs=248.1
Q ss_pred CCCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECCeeccCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEEcC
Q psy7042 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNS 168 (2245)
Q Consensus 89 ~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 168 (2245)
.||.|...|.++.+.+|+.++|.|.+.|.|.+.|.|+|+|..+..+.++.+...++...|.|.+++.+|+|.|+|.|.|.
T Consensus 4 ~pP~~~~~p~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~ 83 (284)
T 2rik_A 4 APPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNV 83 (284)
T ss_dssp CCCEEEECCCCEEEETTCCEEEEEEEESSSCCEEEEEETTEECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCEEEccccceEecCCCcEEEEEEEEcCCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEEEEEC
Confidence 58999999999999999999999999999999999999999999888888877777778999999999999999999999
Q ss_pred cccceeEEEEEecCCCeeecCC-CceEEcCCCeEEEEEEEecCCCceEEEeeCceeeecCCceEEEEeCCeEEEEEcccC
Q psy7042 169 VGFAHTSSRVKIGTPPRIDRMP-NALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIR 247 (2245)
Q Consensus 169 ~g~~~~~~~l~V~~~P~~~~~~-~~~~v~~G~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~ 247 (2245)
.|..+.++.|.|..+|.+...+ ....+.+|+.+.|.|.+.|.|.+.+.|+|+|..+.....+.+........|.|.++.
T Consensus 84 ~g~~~~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~ 163 (284)
T 2rik_A 84 AGKDSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLS 163 (284)
T ss_dssp TEEEEEEEEEEEECCCEEEECCCSEEEEETTCCEEEEEEEESSSCCEEEEEETTEECCCSSSEEEEEETTEEEEEECSCC
T ss_pred CceEEEEEEEEccCCCcccccCCCceEecCCceEEEEEEEeeeCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEECCCC
Confidence 9998889999999999876654 456789999999999999999999999999999988888877777778899999999
Q ss_pred ccCceeEEEEEEcCCcceEEEEEEEEecCCCCCCCCcccceeeccceEEEecCCCCCCCceeEEEEEEEEecCCCceEEe
Q psy7042 248 KEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICI 327 (2245)
Q Consensus 248 ~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~s~~~~w~pp~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (2245)
.+|+|.|+|.|.|..|..+..+.|.|..+|..
T Consensus 164 ~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~------------------------------------------------ 195 (284)
T 2rik_A 164 VEDSGDYTCEAHNAAGSASSSTSLKVKEPPVF------------------------------------------------ 195 (284)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEEEEECCCBC------------------------------------------------
T ss_pred cccCEEEEEEEEcCCCceeEEEEEEEecCCcc------------------------------------------------
Confidence 99999999999999998888888877654311
Q ss_pred eeccCcceEEEcCCCCCCEEEEEEEEEecCCCCCCCCCCCceecCCCCCCCCCCCCcEEEeecCCeeEEEecCCCCCCCC
Q psy7042 328 STTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGS 407 (2245)
Q Consensus 328 ~~~~~~~~~~i~~l~~~~~~~~~c~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~v~~~~~~~~~l~W~~~~~~~~~ 407 (2245)
T Consensus 196 -------------------------------------------------------------------------------- 195 (284)
T 2rik_A 196 -------------------------------------------------------------------------------- 195 (284)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccEEEEEeeecCCCCcEEEeeeecCCceeecCCcccCceEEEEEEeecCCCCCCCCCCCCcEEecCCcccCCCceeccc
Q psy7042 408 RIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPL 487 (2245)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~s~~~~~v~~~~~~~~~~p~~~~~~ 487 (2245)
...+
T Consensus 196 ----------------------------------------------------------------------------~~~~ 199 (284)
T 2rik_A 196 ----------------------------------------------------------------------------RKKP 199 (284)
T ss_dssp ----------------------------------------------------------------------------CSCC
T ss_pred ----------------------------------------------------------------------------eeCC
Confidence 1111
Q ss_pred cccccccccceeeEEEEeccCcCeEEEEeCCeecCCCccEEEEeeCCeEEEEEecccccCCceEEEEEEeCCCCCCccee
Q psy7042 488 RNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAE 567 (2245)
Q Consensus 488 ~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~ 567 (2245)
....+.+|+.+.|.|.+.|.|.+.+.|++++..+....++.+...+....|.|.++..+|+|.|+|.|.|..|....++.
T Consensus 200 ~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~ 279 (284)
T 2rik_A 200 HPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSYTCVGS 279 (284)
T ss_dssp CCEEECTTCCEEEEEECBSSSCCEEEEEETTEEECBTTTEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred CcceecCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEEcCCCcccCEEEEEEEEeCCCceeEEEE
Confidence 22345678899999999999999999999999999888888888888889999999999999999999999999988888
Q ss_pred EeEe
Q psy7042 568 LIIM 571 (2245)
Q Consensus 568 l~v~ 571 (2245)
|.|+
T Consensus 280 l~V~ 283 (284)
T 2rik_A 280 ITLK 283 (284)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 8875
No 34
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=100.00 E-value=1.4e-32 Score=345.01 Aligned_cols=355 Identities=18% Similarity=0.263 Sum_probs=256.9
Q ss_pred ecCCeEEEEeeeecCCCCceeEecCCccccCCC-CcEEEeeecceeEEEEccC-CcCCceEEEEEEEcCCccee-eEEEE
Q psy7042 1435 KAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSD-TRVHKQLTMNSASLVVKNS-QRSDGGQYRLQLKNPAGFDT-ATLHS 1511 (2245)
Q Consensus 1435 ~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~-~~~~~~~~~~~~~L~i~~~-~~~d~G~Y~c~a~n~~g~~~-~~~~~ 1511 (2245)
.+|+.+.|.|.+.|.|.|.++|+|+|..+.... .++. .. +..|.|.++ +.+|+|.|+|.|.|..|... ..+.+
T Consensus 21 ~eg~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~--~~--~g~l~i~~~~~~~D~G~Y~C~A~N~~G~~~s~~~~l 96 (384)
T 3kld_A 21 SEEKKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYS--VV--DGSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKL 96 (384)
T ss_dssp CSCSEEEECCEEEEESCCEEEEEETTEECCC----CEE--EE--TTEEEEESCCHHHHCEEEEEEEEETTEEEECCCEEE
T ss_pred CCCCeEEEEeEecCCCCCEEEEEECCEECcCCCCccEE--EE--CCEEEEcCCCCcccCEEEEEEEEcCcccEEecceEE
Confidence 588999999999999999999999999887542 2332 22 335777766 88999999999999998653 35566
Q ss_pred EEeccCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccchhccccccCcccccCCeEEEEecCCCCCCCCccceEEEEEEec
Q psy7042 1512 RLRTLPDSVNPRCHLPSSTSKERPKFPTHPNHQPWLKWARASLTSKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLI 1591 (2245)
Q Consensus 1512 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~w~~p~~~~~~~i~~~~~~~~~~ 1591 (2245)
.+..++.... .+.. ......++.+.|.|..+..
T Consensus 97 ~v~~~~~~~~------------------~~~~-------------~~~v~~G~~~~l~C~~~~~---------------- 129 (384)
T 3kld_A 97 QFAYLENFKT------------------RTRS-------------TVSVRRGQGMVLLCGPPPH---------------- 129 (384)
T ss_dssp EEEEECCCSC------------------CCCC-------------CEEEEETCCEEECCCCCSE----------------
T ss_pred EEeccccccc------------------CCCC-------------ceeEEcCCCeEEecCCCCC----------------
Confidence 6654432100 0000 0011234456666643211
Q ss_pred CCccceEeeccccCCccceEEEEeecCccCCCCCCccceeeEeeeCCeeeEEeccceeeeceEEEeccCCCCeEEEEEEE
Q psy7042 1592 SDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIA 1671 (2245)
Q Consensus 1592 ~~~~~~~~~~~~~~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a 1671 (2245)
.....+.|+++|.++..... .+ +. . ...+|.|.+++.+|.|.|+|.|
T Consensus 130 ---------------~~~~~~~W~~~~~~~~~~~~---~~----------~~-~----~~~~L~I~~v~~~D~G~Y~C~a 176 (384)
T 3kld_A 130 ---------------SGELSYAWIFNEYPSYQDNR---RF----------VS-Q----ETGNLYIAKVEKSDVGNYTCVV 176 (384)
T ss_dssp ---------------ESCEEEEEEETTEECCCSSS---EE----------EC-T----TTCCEEESSCCGGGCEEEEEEE
T ss_pred ---------------CCCeEEEEEECCCCCEeecc---EE----------EE-c----CCCcEEEeecCHHHCceEEEEE
Confidence 11245789999988752211 00 00 0 1237999999999999999999
Q ss_pred EcCCCcCCCCCcCcceEEee--ecCCCCCcee-ccCCceEEcCCCeEEEEEEecCcCCCeEEEeeC-CEeccCCceEEEE
Q psy7042 1672 VNAIGKSEPSICTTPVKICE--FVGGEKPDFI-VPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRN-GREISSGARYRVE 1747 (2245)
Q Consensus 1672 ~n~~g~~~~~~~~~~v~~~~--~~~~~~p~~~-~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~-~~~l~~~~~~~~~ 1747 (2245)
.|..+..........+.+.. ......|.+. ..+....+.+|+++.|.|.+.|.|.|.+.|+++ +..+....+ ..
T Consensus 177 ~n~~~~~~~~~~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~~~--~~ 254 (384)
T 3kld_A 177 TNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARKAR--RH 254 (384)
T ss_dssp EETTTTEEEECCCEEEEEEEEEECCCEEEEEEEECCSEEEEETTSCEEEEEEEEEESCCEEEEEETTCCCCCTTCE--EC
T ss_pred ecccccceeeCCceEEEEccCCcccccCCceeecCCCceEecCCCcEEEEEEEeecCCCcEEEEeCCCccccccce--ec
Confidence 99876532111111121111 1111233333 235567889999999999999999999999995 445543322 11
Q ss_pred ecCcEEEEEEeeeccCCCeEEEEEEecCceeeEEEEEEEecCCCccccCCCceEEcCCCeEEEEEEEeccCCcEEEEEEC
Q psy7042 1748 TAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKN 1827 (2245)
Q Consensus 1748 ~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~v~W~~~ 1827 (2245)
..+ ..|.|.+++.+|+|.|+|.|.|..|.....+.|.|..+|.+...+....+.+|+++.|.|.+.|.|.|.|+|+|+
T Consensus 255 ~~~--~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~i~W~k~ 332 (384)
T 3kld_A 255 KSN--GILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKN 332 (384)
T ss_dssp TTS--CEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEEECTTCCEEEECEEEEESCCEEEEEET
T ss_pred CCC--cEEEECCCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCccccCCCceEecCCCCEEEEeECCccCCCeEEEEEC
Confidence 222 359999999999999999999999999999999999999998888889999999999999999999999999999
Q ss_pred CEEeecCCceEEEEcCCeEEEEEcccCcccceEEEEEEEcCCeeeEEEEEEEEe
Q psy7042 1828 GRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINIT 1881 (2245)
Q Consensus 1828 g~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 1881 (2245)
|+.+....++.+. +. .|.|.++..+|+|.|+|.|.|..|....++.|.|.
T Consensus 333 g~~l~~~~~~~~~--~~--~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~a~L~V~ 382 (384)
T 3kld_A 333 GDPLLTRDRIQIE--QG--TLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVI 382 (384)
T ss_dssp TEECCCBTTEEEE--TT--EEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CEECCCCccEEEe--CC--EEEEeecChhhCEEEEEEEEeCCceEEeceEEEEe
Confidence 9999777766542 22 79999999999999999999999999999999886
No 35
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=100.00 E-value=5.6e-31 Score=316.59 Aligned_cols=279 Identities=24% Similarity=0.435 Sum_probs=246.1
Q ss_pred CCCceeccCCceEEcCCCeEEEEEEecCcCCCeEEEeeCCEeccCCceEEEEecCcEEEEEEeeeccCCCeEEEEEEecC
Q psy7042 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNS 1775 (2245)
Q Consensus 1696 ~~p~~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~ 1775 (2245)
.+|.|...+.++.+.+|++++|.|.+.+.|.+.+.|+|++..+....++.+...++...|.|.+++.+|+|.|+|.+.|.
T Consensus 4 ~pP~~~~~p~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~ 83 (284)
T 2rik_A 4 APPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNV 83 (284)
T ss_dssp CCCEEEECCCCEEEETTCCEEEEEEEESSSCCEEEEEETTEECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCEEEccccceEecCCCcEEEEEEEEcCCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEEEEEC
Confidence 58888888899999999999999999999999999999999998888888877777888999999999999999999999
Q ss_pred ceeeEEEEEEEecCCCccccCC-CceEEcCCCeEEEEEEEeccCCcEEEEEECCEEeecCCceEEEEcCCeEEEEEcccC
Q psy7042 1776 VGFAHTSSRVKIGTPPRIDRMP-NALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIR 1854 (2245)
Q Consensus 1776 ~g~~~~~~~l~V~~~p~~~~~~-~~~~~~~g~~~~l~C~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~l~i~~~~ 1854 (2245)
.|.....+.|.|..+|.+...+ ....+.+|+.+.|.|.+.|.|.+.+.|+++|..+....++.+........|.|.++.
T Consensus 84 ~g~~~~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~ 163 (284)
T 2rik_A 84 AGKDSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLS 163 (284)
T ss_dssp TEEEEEEEEEEEECCCEEEECCCSEEEEETTCCEEEEEEEESSSCCEEEEEETTEECCCSSSEEEEEETTEEEEEECSCC
T ss_pred CceEEEEEEEEccCCCcccccCCCceEecCCceEEEEEEEeeeCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEECCCC
Confidence 9998889999999999876544 456688999999999999999999999999999988888877777788899999999
Q ss_pred cccceEEEEEEEcCCeeeEEEEEEEEeCCCCCCCCCceecccccceEEEEecCCCCCCCeeeeEEEEEEEcCCCCceEEE
Q psy7042 1855 KEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICI 1934 (2245)
Q Consensus 1855 ~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~ 1934 (2245)
.+|+|.|+|.|.|..|.....+.|.|..+|
T Consensus 164 ~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p-------------------------------------------------- 193 (284)
T 2rik_A 164 VEDSGDYTCEAHNAAGSASSSTSLKVKEPP-------------------------------------------------- 193 (284)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEEEEECCC--------------------------------------------------
T ss_pred cccCEEEEEEEEcCCCceeEEEEEEEecCC--------------------------------------------------
Confidence 999999999999999887777666664221
Q ss_pred eeecCcceEEecCCCCCCeEEEEEEEECCCCCCCCCCCcCceeccCCCCCCCCCCCcEEEEEcCCeEEEEEeccCCCCCC
Q psy7042 1935 STTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGS 2014 (2245)
Q Consensus 1935 ~~~~~~~~~~i~~l~~~~~y~~~~~a~n~~g~~~~s~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~ 2014 (2245)
T Consensus 194 -------------------------------------------------------------------------------- 193 (284)
T 2rik_A 194 -------------------------------------------------------------------------------- 193 (284)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeEEEEEEeeecCccceEEEEEEeccceEEeCCCcCCceEEEEEEEEeccccCCCcCCCCcccccCcccCCCceEEeec
Q psy7042 2015 RIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPL 2094 (2245)
Q Consensus 2015 ~i~~y~i~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~s~~v~~~~~~~~~~p~~~~~~ 2094 (2245)
.+...+
T Consensus 194 --------------------------------------------------------------------------~~~~~~ 199 (284)
T 2rik_A 194 --------------------------------------------------------------------------VFRKKP 199 (284)
T ss_dssp --------------------------------------------------------------------------BCCSCC
T ss_pred --------------------------------------------------------------------------cceeCC
Confidence 011111
Q ss_pred cceeeecCccEEEEEEEEeeCCCeEEEeeCCEeeCCCCcEEEEEeCcEEEEEEcCCCCCCCeEEEEEEEeCCceeeEEEE
Q psy7042 2095 RNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAE 2174 (2245)
Q Consensus 2095 ~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~ 2174 (2245)
....+.+|+.++|.|.+.|.|.|.|.|+|+|..+..+.++.+..++....|.|.++..+|+|.|+|.|.|.+|..+.++.
T Consensus 200 ~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~ 279 (284)
T 2rik_A 200 HPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSYTCVGS 279 (284)
T ss_dssp CCEEECTTCCEEEEEECBSSSCCEEEEEETTEEECBTTTEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred CcceecCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEEcCCCcccCEEEEEEEEeCCCceeEEEE
Confidence 22346689999999999999999999999999999999999998888889999999999999999999999999999999
Q ss_pred EEEE
Q psy7042 2175 LIIM 2178 (2245)
Q Consensus 2175 l~V~ 2178 (2245)
|.|+
T Consensus 280 l~V~ 283 (284)
T 2rik_A 280 ITLK 283 (284)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 9885
No 36
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=100.00 E-value=1.3e-31 Score=336.52 Aligned_cols=399 Identities=16% Similarity=0.197 Sum_probs=231.6
Q ss_pred ccCcceeEeeeccccCCCCCCCCCCCC---------eEeeeCCCCCcccCCcceeeEEecCCeEEEEeeeecCCCCceeE
Q psy7042 1386 RPTSSTVYCKDTTMNSSNSEPGKQSGP---------VIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFW 1456 (2245)
Q Consensus 1386 ~~~~~~y~c~~~~~~~~~~~~~~~~~~---------~~v~~~~~~p~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W 1456 (2245)
..+.|.|.|...+....++.....+.- +.....|..+.+...+. +++|.+|+.+.|.|.+.+.|.+.+.|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~c~~~p~~~~~~~~~~-~v~V~~G~~v~L~C~v~g~P~p~i~W 82 (423)
T 3qs7_E 4 NQDLPVIKCVLINHKNNDSSVGKSSSYPMVSESPEDLGCALRPQSSGTVYEAA-AVEVDVSASITLQVLVDAPGNISCLW 82 (423)
T ss_dssp ----------------------------------------------------C-EEEECSSCCEEEEEECSCCSSCEEEE
T ss_pred cCCCCeeEEEEEeccCCCccccccccchhhhCCHHHcCCccCCCCCcceeccc-cEEEecCCcEEEEEEEEcCCCCeEEE
Confidence 356788999877653333222211111 22222232222222333 89999999999999999999999999
Q ss_pred ecCCccccCCCCcEEEeeecceeEEEEccCCcCCceEEEEEEEcCCcceeeEEEEEEeccCCCCCCCCCCCCCCCCCCCC
Q psy7042 1457 FANDSIIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLHSRLRTLPDSVNPRCHLPSSTSKERPK 1536 (2245)
Q Consensus 1457 ~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~c~a~n~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 1536 (2245)
++++..+.... ... .......+|.|.+++.+|+|.|+|.|.|..|.....+.|.|...|...
T Consensus 83 ~~~~~~l~~~~-~~~-~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~---------------- 144 (423)
T 3qs7_E 83 VFKHSSLNCQP-HFD-LQNRGVVSMVILKMTETQAGEYLLFIQSEATNYTILFTVSIRNTLLYT---------------- 144 (423)
T ss_dssp EETTEEECCCC-BC------CEEEEEESSCCSSSCSEEEEEEEC--CEEEEEEEEEEC-----C----------------
T ss_pred EECCCccCccc-eec-cccceEEEEEEeecCcccCEEEEEEEEcCCCcEEEEEEEEEecCcccc----------------
Confidence 99987665321 110 011123579999999999999999999999988778878776432210
Q ss_pred CCCCCCCCcccchhccccccCcccccCCeEEEEecCCCCCCCCccceEEEEEEecCCccceEeeccccCCccceEEEEee
Q psy7042 1537 FPTHPNHQPWLKWARASLTSKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVS 1616 (2245)
Q Consensus 1537 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~w~~p~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~ 1616 (2245)
+..+ . ....++.+. +.|...+.|. +.+.|++
T Consensus 145 ----~~~p-~------------~~~~~~~~~-----------------------------L~C~a~G~P~---P~i~W~k 175 (423)
T 3qs7_E 145 ----LRRP-Y------------FRKMENQDA-----------------------------LVCISESVPE---PIVEWVL 175 (423)
T ss_dssp ----EEEE-E------------EEECSSSSC-----------------------------EEEEEEESSC---CEEEEEE
T ss_pred ----ccCC-c------------EeccCCceE-----------------------------EEEEEeeecC---CeEEEEE
Confidence 0000 0 000011112 2333333333 4689999
Q ss_pred cCccCCCCCCccceeeEeeeCCeeeEEeccceeeeceEEEeccCCCCeEEEEEEEEcCCCcCCCCCcCcceEEeeecCCC
Q psy7042 1617 EGKSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVKICEFVGGE 1696 (2245)
Q Consensus 1617 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~~~~v~~~~~~~~~ 1696 (2245)
+|..+.......... +. .... -+...|.|.|+|.|.|..|.... ..+.+.. ..
T Consensus 176 ~~~~~~~~~~~~~~~----------~~-------~~~~---~l~~~d~G~Y~C~A~N~~G~~~~----~~~~l~V---~~ 228 (423)
T 3qs7_E 176 CDSQGESCKEESPAV----------VK-------KEEK---VLHELFGTDIRCCARNELGRECT----RLFTIDL---NQ 228 (423)
T ss_dssp C-------------C----------EE-------ECCS---EECCCCSSCEEEEEECSSCEEEE----ECEEEES---SS
T ss_pred CCCCCcccccccccc----------cc-------ccce---EEecccCeEEEEEEEcCCCCcce----eeEEEEE---ec
Confidence 998653211000000 00 0000 11578899999999999886532 1122221 23
Q ss_pred CCceeccCCceEEcCCCeEEEEEEecC-cCCCeEEEeeCCEeccCCceEEEE-e-c----CcEEEEEEeeeccCCCeEEE
Q psy7042 1697 KPDFIVPLKDLVVPLGKLLTLQCEATG-TPVPKCRWLRNGREISSGARYRVE-T-A----GGVFRLHFNEVTDVDNGDYT 1769 (2245)
Q Consensus 1697 ~p~~~~~~~~~~~~~G~~v~L~C~~~~-~p~~~v~W~~~~~~l~~~~~~~~~-~-~----~~~~~L~i~~v~~~d~G~Y~ 1769 (2245)
+|.+ ++.+..+.+|+++.|.|.+.| .|.+.+.|+|+|..+.....+... . . ....+|.|.+++.+|+|.|+
T Consensus 229 ~p~~--~~~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 306 (423)
T 3qs7_E 229 TPQT--TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYT 306 (423)
T ss_dssp CCCS--STTEEEEETTSCEEEEEEEEESSSCCCEEEEESSSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCTTTCEEEE
T ss_pred CCcc--CCCceEEeCCCeEEEEEEEEcCCCCcEEEEEECCEEccccceeecccccCCceeEEEEEEEEeecCHHHCEEEE
Confidence 3433 344688999999999999998 677899999999988654333211 1 1 12345999999999999999
Q ss_pred EEEecCceeeEEEEEEEecCCCccccCC--CceEEcCCCeEEEEEEEeccCCcEEEEEECCEEeecCCceEEEEcCCeEE
Q psy7042 1770 CEAYNSVGFAHTSSRVKIGTPPRIDRMP--NALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYII 1847 (2245)
Q Consensus 1770 C~~~n~~g~~~~~~~l~V~~~p~~~~~~--~~~~~~~g~~~~l~C~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~ 1847 (2245)
|.|.|. ....+.|.|..+|.+...+ ....+.+|+++.|.|.+.|.|.+.|+|+|+|..|...... ......
T Consensus 307 C~A~N~---~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~----~~~~~~ 379 (423)
T 3qs7_E 307 CSSSKH---PSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKG----LDNGYS 379 (423)
T ss_dssp EEETTE---EEEEEEEEEESSCEEEEC---CEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCB----CSSSSE
T ss_pred EEEecC---CCceEEEEEEeCCcceEcCCCccEEecCCCeEEEEEEEEEcCCCeEEEEECCEECCCcccc----ccCCcE
Confidence 999997 6778899999988876544 4567788999999999999999999999999999655310 001112
Q ss_pred EEEcccCcccceEEEEEEEcCCeeeEEEEEEEEeCCCCCCC
Q psy7042 1848 IFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPI 1888 (2245)
Q Consensus 1848 l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~~ 1888 (2245)
+.+.....+|+|.|+|.|.|..|..+.++.|.|...|.++.
T Consensus 380 ~~~~~~~~~D~G~YtC~A~N~~G~~~~s~~L~v~~~p~~~~ 420 (423)
T 3qs7_E 380 ISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRSGTKHHH 420 (423)
T ss_dssp EEEECCCTTCCSCEEEEEEETTEEEEEEEEEC---------
T ss_pred EEEEecccccCEEEEEEEEcCCceEEEEEEEEEecCCcccc
Confidence 22345677899999999999999999999999998887664
No 37
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=100.00 E-value=1.8e-31 Score=340.66 Aligned_cols=381 Identities=18% Similarity=0.272 Sum_probs=276.7
Q ss_pred eeCCCCCcccCCcceeeEEecCCeEEEEeeeecCCCCceeEecCCccccCCCCcEEEeeecceeEEEEc----cCCcCCc
Q psy7042 1416 EEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVK----NSQRSDG 1491 (2245)
Q Consensus 1416 ~~~~~~p~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~----~~~~~d~ 1491 (2245)
.....+|.+......++.+.+|+.+.|.|.+.|.|.+.++|+|++..+.... ...+........|.|. +++.+|+
T Consensus 11 ~~~~~~P~i~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~-~~~~~~~~~~~~l~i~~~~~~~~~~D~ 89 (404)
T 3p3y_A 11 NELTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAK-DPRVSMRRRSGTLVIDFRSGGRPEEYE 89 (404)
T ss_dssp --CCCCCCEEEECCTTCEECSSSCCCCCEEECCSSCCEEEEEETTEECCGGG-CSSCBCCSSSCCCBCCCTTTCCTTSSC
T ss_pred hhccCCCcccccCCccEEEcCCCCEEEEEEecCCCCCeEEEEECCEEeeeec-CCcceEecCCceEEEEeccCCCCccCC
Confidence 3445567776666677899999999999999999999999999998775331 1122333445566664 8899999
Q ss_pred eEEEEEEEcCCccee-eEEEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccchhccccccCcccccCCeEEEEe
Q psy7042 1492 GQYRLQLKNPAGFDT-ATLHSRLRTLPDSVNPRCHLPSSTSKERPKFPTHPNHQPWLKWARASLTSKGVDSTEDSISLVW 1570 (2245)
Q Consensus 1492 G~Y~c~a~n~~g~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~w 1570 (2245)
|.|+|.|.|..|... ..+.+.|...|..... +.. ......++.++|.|
T Consensus 90 G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~------------------~~~-------------~~~v~~G~~v~l~C 138 (404)
T 3p3y_A 90 GEYQCFARNKFGTALSNRIRLQVSKSPLWPKE------------------NLD-------------PVVVQEGAPLTLQC 138 (404)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEECCCCCCCCC------------------CCC-------------CEEEETTSCEEECC
T ss_pred EEEEEEEEcCCCeEeeeeEEEEEeccCccccC------------------CCC-------------CeEEccCCcEEEEe
Confidence 999999999988764 4667777665432110 000 01123345677777
Q ss_pred cCCCCCCCCccceEEEEEEecCCccceEeeccccCCccceEEEEeecCccCCCCCCccceeeEeeeCCeeeEEeccceee
Q psy7042 1571 SKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLEREVGGAIWLKCNDYNVL 1650 (2245)
Q Consensus 1571 ~~p~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1650 (2245)
..+... +...+.|++++......... +.. ..
T Consensus 139 ~~~~~~-------------------------------p~~~v~W~~~~~~~~~~~~~--------------~~~----~~ 169 (404)
T 3p3y_A 139 NPPPGL-------------------------------PSPVIFWMSSSMEPITQDKR--------------VSQ----GH 169 (404)
T ss_dssp CCCCCS-------------------------------SCCEEEEECTTSCBCCCCSS--------------EEE----CT
T ss_pred CCCCCC-------------------------------CCCeEEEeCCCccccCCCCc--------------EEE----cC
Confidence 642111 11357899998654322110 000 01
Q ss_pred eceEEEeccCCCC-eEEEEEEEEcCCCcCCCCCcCcceEEee--ecCCCCCceeccC---CceEEcCCCeEEEEEEecCc
Q psy7042 1651 ECSFSVLNLVEGN-DYEFRIIAVNAIGKSEPSICTTPVKICE--FVGGEKPDFIVPL---KDLVVPLGKLLTLQCEATGT 1724 (2245)
Q Consensus 1651 ~~~l~i~~~~~~d-~g~y~c~a~n~~g~~~~~~~~~~v~~~~--~~~~~~p~~~~~~---~~~~~~~G~~v~L~C~~~~~ 1724 (2245)
..+|.|.++...| .|.|+|.|.|..|..........+.+.. .....+|.+..+. ....+.+|+++.|.|.+.+.
T Consensus 170 ~~~l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~v~l~C~~~g~ 249 (404)
T 3p3y_A 170 NGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGV 249 (404)
T ss_dssp TSCEEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEECCSCCCCCCCCBSSSCSSEEEEEEETTSCEEEECCBCCS
T ss_pred CCcEEEEeeeeccCCcceEEEEEeccccceeccCceeEEEeccCCccccCCccccccCCCCCceEecCCCEEEEEEECCC
Confidence 2379999999999 5999999999887543222222233321 1122355555433 34678999999999999999
Q ss_pred CCCeEEEeeCCEeccCCceEEEEecCcEEEEEEeeeccCCCeEEEEEEecCceeeEEEEEEEecCCCccccCCCceEEcC
Q psy7042 1725 PVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPE 1804 (2245)
Q Consensus 1725 p~~~v~W~~~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~ 1804 (2245)
|.+.+.|+++|..+..... .....+. .|.|.+++.+|+|.|+|.|.|..|.....+.|.|..+|.+...+....+.+
T Consensus 250 p~~~v~W~~~~~~~~~~~~-~~~~~~~--~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~v~~ 326 (404)
T 3p3y_A 250 PTPDIAWYKKGGDLPSDKA-KFENFNK--ALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAP 326 (404)
T ss_dssp SCCEEEEEETTBCCCTTTE-EEEGGGT--EEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEEECCCCEEECT
T ss_pred CCCcEEEEECCEECCCCcc-cccccCc--eEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEEeCCCeeeccCCcceeec
Confidence 9999999999998865544 2222222 499999999999999999999999999999999999999988888899999
Q ss_pred CCeEEEEEEEeccCCcEEEEEECCEEeecCCc-eEEEEcCCeEEEEEcccCcccceEEEEEEEcCCeeeEEEEEEEEeC
Q psy7042 1805 GDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDR-FKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITG 1882 (2245)
Q Consensus 1805 g~~~~l~C~~~~~p~~~v~W~~~g~~l~~~~~-~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 1882 (2245)
|+.+.|.|.+.|.|.+.+.|+++|..+..... ......+ ..|.|.++..+|+|.|+|.|.|..|.....+.|.|.+
T Consensus 327 g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~--~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~d 403 (404)
T 3p3y_A 327 GEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAG--DTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLD 403 (404)
T ss_dssp TCCEEEECEEEEESCCEEEEEETTEEGGGSCCCTTEEEET--TEEEESSCCSSCCCEEEEEEEETTEEEEEEEEEEEC-
T ss_pred CCcEEEEEEccccCCCceEEEECCEecCCCCCCceEEecC--CEEEEeecCHHHCEEEEEEEEeCCCcEEEEEEEEEEe
Confidence 99999999999999999999999999865532 1122222 3799999999999999999999999999999998864
No 38
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.98 E-value=1.5e-32 Score=342.76 Aligned_cols=315 Identities=11% Similarity=0.111 Sum_probs=241.8
Q ss_pred ceEEeCCCeEEEEEEEeeecCCceEEEECCeecc--------------CCCeEEEEE---cCcEEEEEEeeeccCCCeEE
Q psy7042 99 DLVVPLGKLLTLQCEATGTPVPKCRWLRNGREIS--------------SGARYRVET---AGGVFRLHFNEVTDVDNGDY 161 (2245)
Q Consensus 99 ~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~--------------~~~~~~~~~---~~~~~~L~i~~~~~~d~G~Y 161 (2245)
.+.+.+|+.++|.|.+.+.|.+.|.|+|++..+. ...|+.+.. .++..+|.|.+++.+|+|.|
T Consensus 3 ~v~~~~G~~v~L~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 82 (363)
T 1wio_A 3 VVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTY 82 (363)
T ss_dssp EEEEETTSCEEECCCCTTCSSCCEEEEETTCCEEEEEETTEEEECSSTTGGGEECCHHHHHTTCCCEEECSCCGGGCEEE
T ss_pred eEEEeCCCeEEEEEEecCCCceEEEEEeCCccceeccCccEEecCCcccccceeeeeccccCCeEEEEECCCCHHHCEEE
Confidence 3578999999999999999999999999986422 123554433 33445699999999999999
Q ss_pred EEEEEcCcccceeEEEEEecCCCeeecCCCceEEcCCCeEEEEEEEecCCCceEEEeeCceeeecCCceEEEEeCCeEEE
Q psy7042 162 TCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIII 241 (2245)
Q Consensus 162 ~C~a~n~~g~~~~~~~l~V~~~P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L 241 (2245)
+|.|.|..+ .+.|.|.. +...|. ..+.+|+.++|.|.+.+.|.+.++|+|+|..+.. ....|
T Consensus 83 ~C~~~n~~~----~~~l~V~~---~~~~~~-~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~----------~~~~L 144 (363)
T 1wio_A 83 ICEVEDQKE----EVQLLVFG---LTANSD-THLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQ----------GGKTL 144 (363)
T ss_dssp EEEETTEEE----EEEEEEEE---EEESSC-SSEESBSCEEEEEECCTTCCCCEEEECSSSCEEE----------ESSEE
T ss_pred EEEEEECCC----cEEEEEEe---CCCCCc-eEEecCCCEEEEEEcCCCCCCeEEEEcCCCcccc----------cceEE
Confidence 999998743 56677764 233333 4678999999999999999999999999866522 22379
Q ss_pred EEcccCccCceeEEEEEEcCCcceEEEEEEEEecCCCCCCCCcccceeeccceEEEecCCCCCCCceeEEEEEEEEecCC
Q psy7042 242 FIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISM 321 (2245)
Q Consensus 242 ~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~s~~~~w~pp~~~~~~~~~~~~~~~~~~~~ 321 (2245)
.|.++..+|+|.|+|.|.|..+.....+.|.|..+|..
T Consensus 145 ~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v~~~p~~------------------------------------------ 182 (363)
T 1wio_A 145 SVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKA------------------------------------------ 182 (363)
T ss_dssp EECSBCGGGCEECEEEEEETTEEEEECCEECEECCSCS------------------------------------------
T ss_pred EEeeCChhcCCEEEEEEecCCCeEEEEEEEEEecCCCC------------------------------------------
Confidence 99999999999999999987665554444444322110
Q ss_pred CceEEeeeccCcceEEEcCCCCCCEEEEEEEEEecCCCCCCCCCCCceecCCCCCCCCCCCCcEEEeecCCeeEEEecCC
Q psy7042 322 PHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKP 401 (2245)
Q Consensus 322 ~~~~~~~~~~~~~~~~i~~l~~~~~~~~~c~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~v~~~~~~~~~l~W~~~ 401 (2245)
T Consensus 183 -------------------------------------------------------------------------------- 182 (363)
T 1wio_A 183 -------------------------------------------------------------------------------- 182 (363)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCccEEEEEeeecCCCCcEEEeeeecCCceeecCCcccCceEEEEEEeecCCCCCCCCCCCCcEEecCCcccCCC
Q psy7042 402 LDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAP 481 (2245)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~s~~~~~v~~~~~~~~~~p 481 (2245)
T Consensus 183 -------------------------------------------------------------------------------- 182 (363)
T 1wio_A 183 -------------------------------------------------------------------------------- 182 (363)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeccccccccccccceeeEEEEec-----cCcCeEEEEeCCeecCC--------CccEEEEe----------eCCeEEE
Q psy7042 482 EIIVPLRNANAIQNHNAQFQCTITG-----CPKPTISWLKGSREITP--------SARHHIFA----------EGDTYTL 538 (2245)
Q Consensus 482 ~~~~~~~~~~~~~g~~~~l~C~~~g-----~p~~~v~W~~~~~~i~~--------~~~~~~~~----------~~~~~~L 538 (2245)
+....+.+|+.+.|.|.+.+ .|.+.+.|+++|..+.. +.++.+.. .++...|
T Consensus 183 -----~~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 257 (363)
T 1wio_A 183 -----SSIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHL 257 (363)
T ss_dssp -----EEEEEEETBCCEEEECCCCCCCCSSCEEEEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEE
T ss_pred -----CCceEEecCCEEEEEEEEecccccCCCceeEEEecCCCCccceEEEEEecCCeeeccccccchhhhcccCCceEE
Confidence 01233567889999998877 78899999999998876 44444432 2234489
Q ss_pred EEecccccCCceEEEEEEeC--CCCCCcceeEeEecCCCCCCCCCcccceEeeCCCeEEEEEeeeecCCCe--EEEEeCC
Q psy7042 539 IINSVYGVDADEYVCRAVNK--GGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPK--ITWYRDN 614 (2245)
Q Consensus 539 ~i~~v~~~d~G~Y~C~a~n~--~g~~~~~~~l~v~~~p~~~~~p~~~~~~~~~~g~~~~l~C~~~g~p~~~--i~W~~~~ 614 (2245)
.|.++..+|+|.|+|.|.|. .|.....+.|.|... .|+.++|.|.+.|.|+|. ++|++++
T Consensus 258 ~i~~v~~~d~G~Y~C~a~n~~~~g~~~~~~~l~V~~v----------------~g~~~~l~C~~~g~p~p~~~i~W~~~~ 321 (363)
T 1wio_A 258 TLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRA----------------TQLQKNLTCEVWGPTSPKLMLSLKLEN 321 (363)
T ss_dssp EESSBCGGGCEEEEEEECBTTTTCCEEEEEEEEEEEE----------------CCCSSSEEEEEESSCCTTCCEEEECSS
T ss_pred EEccCCcCcCcEEEEEEEEhhhcCeEEEEEeEEEEEe----------------cCCCeeEEEEEccccCCCccEEEEeCC
Confidence 99999999999999999999 998888888888621 188899999999999988 9999999
Q ss_pred eEeeccCeEEEEecCCeEEEEEcCCCCCcCEEEEEEEEeCCCCceeEEEEEe
Q psy7042 615 EVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQI 666 (2245)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v 666 (2245)
..+.. ...|.|.++..+|+|.|+|.|.| .|.......+.|
T Consensus 322 ~~~~~-----------~~~l~i~~v~~~d~G~Y~C~a~~-~~~~~~~~~~~V 361 (363)
T 1wio_A 322 KEAKV-----------SKREKAVWVLNPEAGMWQCLLSD-SGQVLLESNIKV 361 (363)
T ss_dssp SSCSE-----------EESSSEEEESSCCSEEEEEEECS-SSSCCEEEEEEE
T ss_pred Cceee-----------eeeeeeeeeccccceeEEEEEec-CCeEEEecceEe
Confidence 87653 23467788999999999999995 455566666655
No 39
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.98 E-value=4.1e-31 Score=335.85 Aligned_cols=374 Identities=18% Similarity=0.266 Sum_probs=266.7
Q ss_pred CcccCCcceeeEEecCCeEEEEeeeec-CCCCceeEecCCccccCCCCcEEEeeecceeEEEEccCCcCCceEEEEEEEc
Q psy7042 1422 PVMDLSGVRDITVKAGEDFSIHVPFMA-FPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKN 1500 (2245)
Q Consensus 1422 p~~~~~~~~~~~v~~g~~~~l~c~~~~-~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~c~a~n 1500 (2245)
|.+. ..+.++.+.+|+.+.|.|.+.+ .|.+.+.|+|+|..+.....++. ......+|.|.+++.+|+|.|+|.|.|
T Consensus 7 P~~~-~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~--~~~~~~~L~i~~~~~~D~G~Y~C~a~n 83 (395)
T 1bih_A 7 PVLK-DQPAEVLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEHNAA--LRKDEGSLVFLRPQASDEGHYQCFAET 83 (395)
T ss_dssp CEEC-CCCSEEEEETTSCEEECCCEESCCSSCEEEEEESSSBCCTTTTTEE--ECTTSCCEEESSCCGGGCEEEEEEEEE
T ss_pred CEee-cCCCceEEeCCCEEEEEEEEecCCCCceEEEEECCcCcccccceEE--EecCCceEEEecCCCCCCcEEEEEEEe
Confidence 4443 3456799999999999999999 89999999999998876653332 334566899999999999999999999
Q ss_pred CCcceee-EEEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccchhccccccCcccccCCeEEEEecCCCCCCCC
Q psy7042 1501 PAGFDTA-TLHSRLRTLPDSVNPRCHLPSSTSKERPKFPTHPNHQPWLKWARASLTSKGVDSTEDSISLVWSKPRHDGGS 1579 (2245)
Q Consensus 1501 ~~g~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~w~~p~~~~~~ 1579 (2245)
..|.... .+.+.+..++.+.. .+ . ......++.+.|.|..+..
T Consensus 84 ~~g~~~s~~~~l~v~~~~~p~~------------------~~------------~--~~~~~~G~~v~l~C~~~~~---- 127 (395)
T 1bih_A 84 PAGVASSRVISFRKTYLIASPA------------------KT------------H--EKTPIEGRPFQLDCVLPNA---- 127 (395)
T ss_dssp TTEEEECCCEEEEEEEEECCCC------------------EE------------E--EECCBTTEEEEECCCCCEE----
T ss_pred CCCeEEeEEEEEEEEEeecCCc------------------CC------------c--ceeeeeCCcEEEEecCCCC----
Confidence 9887643 45565554332100 00 0 0011234556777763110
Q ss_pred ccceEEEEEEecCCccceEeeccccCCccceEEEEeecCccCCCCCCccceeeEeeeCCeeeEEeccceeeeceEEEecc
Q psy7042 1580 PIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNL 1659 (2245)
Q Consensus 1580 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 1659 (2245)
. +.+.+.|+++|.......... ..+.+. ... ...+|.|.++
T Consensus 128 ------------------------~---p~~~v~W~~~~~~~~~~~~~~------~~~~~~--~~~----~~~~L~i~~v 168 (395)
T 1bih_A 128 ------------------------Y---PKPLITWKKRLSGADPNADVT------DFDRRI--TAG----PDGNLYFTIV 168 (395)
T ss_dssp ------------------------E---SCCEEEEEEEETTSCGGGCCC------CCCTTE--EEC----TTSCEEEEEE
T ss_pred ------------------------C---CCCeEEEEecCCCcCcccccc------cccccE--EEc----CCCcEEEEEE
Confidence 0 113589999983221110000 000000 000 1237999999
Q ss_pred CCCCeE---EEEEEEEcCCCcCCCCCcCcceEEeee-----cCCCCCceeccCCceEEcCCCeEEEEEEecCcCCCeEEE
Q psy7042 1660 VEGNDY---EFRIIAVNAIGKSEPSICTTPVKICEF-----VGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRW 1731 (2245)
Q Consensus 1660 ~~~d~g---~y~c~a~n~~g~~~~~~~~~~v~~~~~-----~~~~~p~~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W 1731 (2245)
+..|.| .|+|.|.|..|..........+..... ....+|.+ .+....+.+|+.+.|.|.+.|.|.+.+.|
T Consensus 169 ~~~d~G~~~~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~G~~v~l~C~~~g~p~~~i~W 246 (395)
T 1bih_A 169 TKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQY--VSKDMMAKAGDVTMIYCMYGSNPMGYPNY 246 (395)
T ss_dssp CGGGCCSSEEEEEEEECTTCSSCEEEEEEEECCCBCCSSCCCCCCEEEE--ECCSEEEETTSCEEEEEEEECSSCCCCEE
T ss_pred eeccCCCceEEEEEEEecccceEEEeeeEEecccccccccccCCcCcee--cCCceEEECCCcEEEEEEeccCCCCeEEE
Confidence 999999 999999999887542211100000000 00112333 24568899999999999999999999999
Q ss_pred eeCCEeccCCc--eEEEEecCcEEEEEEeeeccCCCeEEEEEEecCceeeEE-EEEEEecCCCccccCCCc-eEEcCCCe
Q psy7042 1732 LRNGREISSGA--RYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHT-SSRVKIGTPPRIDRMPNA-LYIPEGDN 1807 (2245)
Q Consensus 1732 ~~~~~~l~~~~--~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~~~-~~~l~V~~~p~~~~~~~~-~~~~~g~~ 1807 (2245)
+++|..+.... ++..........|.|.+++.+|+|.|+|.|.|..|.... .+.|.|..+|.+...+.. ..+.+|++
T Consensus 247 ~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~ 326 (395)
T 1bih_A 247 FKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVVSAPKYEQKPEKVIVVKQGQD 326 (395)
T ss_dssp EETTEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCEEEEEEEEEEEEEEEEECCCSEEEECTTSC
T ss_pred EECCEEcCCCCceeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCCCceEEEEEEEEEcCCccccCCCcceEecCCCe
Confidence 99999886543 333222222235999999999999999999999998666 889999999999887777 78999999
Q ss_pred EEEEEEEeccCCcEEEEEECCEEeecCCceEEEEcCCeEEEEEcccCcccceEEEEEEEcCCeeeEEEEEEEE
Q psy7042 1808 TKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINI 1880 (2245)
Q Consensus 1808 ~~l~C~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v 1880 (2245)
+.|.|.+.|.|.+.+.|+++|..+... ++.+ .++ .|.|.++..+|+|.|+|.|.|..|.....+.|.|
T Consensus 327 ~~l~C~~~g~p~p~v~W~~~g~~~~~~-~~~~--~~~--~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~V 394 (395)
T 1bih_A 327 VTIPCKVTGLPAPNVVWSHNAKPLSGG-RATV--TDS--GLVIKGVKNGDKGYYGCRATNEHGDKYFETLVQV 394 (395)
T ss_dssp EEEECEEEEESCCCCEEEETTEECCSS-SEEE--ETT--EEEESSCCSTTCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEEEEECcccCCeeEEEECCEECCCC-ceEE--ECC--EEEEeeCCcccCEEEEEEEEccCCCceEEEEEEE
Confidence 999999999999999999999988654 4433 233 8999999999999999999999999999988877
No 40
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.97 E-value=5.8e-31 Score=332.25 Aligned_cols=355 Identities=19% Similarity=0.226 Sum_probs=264.0
Q ss_pred ecCCeEEEEeeeecCCCCceeEecCCccccCC-CCcEEEeeecceeEEEEccCCc-CCceEEEEEEEcCCcceee-EEEE
Q psy7042 1435 KAGEDFSIHVPFMAFPQPAAFWFANDSIIDDS-DTRVHKQLTMNSASLVVKNSQR-SDGGQYRLQLKNPAGFDTA-TLHS 1511 (2245)
Q Consensus 1435 ~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~-~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~c~a~n~~g~~~~-~~~~ 1511 (2245)
.+|+.+.|.|.+.|.|.+.+.|+|++..+... +.++.. ....|.|.++.. +|+|.|+|.|.|..|.... .+.+
T Consensus 20 ~~g~~v~l~C~~~g~p~~~v~W~k~g~~~~~~~~~~~~~----~~~~L~i~~~~~~~D~G~Y~C~a~n~~g~~~s~~~~l 95 (382)
T 1cs6_A 20 SAEEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRL----VAGDLVISNPVKAKDAGSYQCVATNARGTVVSREASL 95 (382)
T ss_dssp CSCCEEEECCEEEEESCCEEEEEETTEECCCSTTSSEEE----ETTEEEEESCCHHHHCEEEEEEEEETTEEEECCCEEE
T ss_pred CCCCcEEEEEEecCCCCCEEEEEECCEECCcCCCccEEe----eCCeEEEecccccccCEEEEEEEEcCCcEEEecceEE
Confidence 68999999999999999999999999888754 334443 235799999997 9999999999999886533 5666
Q ss_pred EEeccCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccchhccccccCcccccCCeEEEEecCCCCCCCCccceEEEEEEec
Q psy7042 1512 RLRTLPDSVNPRCHLPSSTSKERPKFPTHPNHQPWLKWARASLTSKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLI 1591 (2245)
Q Consensus 1512 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~w~~p~~~~~~~i~~~~~~~~~~ 1591 (2245)
.|...+..... +. .......++.+.|.|..+..
T Consensus 96 ~v~~~~~~~~~------------------~~-------------~~~~v~~G~~v~l~C~~~~~---------------- 128 (382)
T 1cs6_A 96 RFGFLQEFSAE------------------ER-------------DPVKITEGWGVMFTCSPPPH---------------- 128 (382)
T ss_dssp EEEEECCCCSS------------------CC-------------CCEEEETTSCEEECCCCCSE----------------
T ss_pred Eeecccccccc------------------CC-------------CceEEecCCcEEEEeCCCCC----------------
Confidence 66654432100 00 00112334567777763211
Q ss_pred CCccceEeeccccCCccceEEEEeecCccCCCCCCccceeeEeeeCCeeeEEeccceeeeceEEEeccCCCCeEEEEEEE
Q psy7042 1592 SDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIA 1671 (2245)
Q Consensus 1592 ~~~~~~~~~~~~~~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a 1671 (2245)
.+...+.|+++|.++........ + + .. ....|.|.+++..|.|.|+|.|
T Consensus 129 ---------------~p~~~i~W~~~~~~~~~~~~~~~-~----------~-~~----~~~~L~i~~~~~~d~G~Y~C~~ 177 (382)
T 1cs6_A 129 ---------------YPALSYRWLLNEFPNFIPADGRR-F----------V-SQ----TTGNLYIAKTEASDLGNYSCFA 177 (382)
T ss_dssp ---------------ESCCEEEEEESSTTCBCCCCSSE-E----------E-CT----TTCCEEESSCCGGGCEEEEEEE
T ss_pred ---------------CCCcEEEEEECCCccccccCceE-E----------E-ec----CceEEEEEeeCcccCeeEEEEE
Confidence 01134789999988642111000 0 0 00 1237999999999999999999
Q ss_pred EcCCCcCCCCCcCcceEEeee---cCCCCCceec-cCCceEEcCCCeEEEEEEecCcCCCeEEEeeCCEeccCCceEEEE
Q psy7042 1672 VNAIGKSEPSICTTPVKICEF---VGGEKPDFIV-PLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVE 1747 (2245)
Q Consensus 1672 ~n~~g~~~~~~~~~~v~~~~~---~~~~~p~~~~-~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~~~~l~~~~~~~~~ 1747 (2245)
.|..|..........+.+... ....+|.+.. .+....+.+|++++|.|.+.+.|.+.+.|++++..+...
T Consensus 178 ~n~~g~~~~~~~s~~~~l~v~~~~~~~~~P~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~------ 251 (382)
T 1cs6_A 178 TSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFAFGNPVPQIKWRKLDGSQTSK------ 251 (382)
T ss_dssp EEEETTEEEEEECCCEEEEEESCCCCCEEEEEEECCCSEEEEETTCCEEEECEEEEESCCEEEEEECCSCCSCC------
T ss_pred EEccccccceeEccceeeccchhhcccCCCceeccCCCceEEeCCCeEEEEEEEccCCCCEEEEEECCcccccE------
Confidence 998754332221222222211 1122455544 345788999999999999999999999999988776431
Q ss_pred ecCcEEEEEEeeeccCCCeEEEEEEecCceeeEEEEEEEecCCCccccCCCceEEcCCCeEEEEEEEeccCCcEEEEEEC
Q psy7042 1748 TAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKN 1827 (2245)
Q Consensus 1748 ~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~v~W~~~ 1827 (2245)
.......|.|.+++.+|+|.|+|.|.|..|.....+.|.|..+|.+...+....+.+|+.+.|.|.+.|.|.+.+.|+++
T Consensus 252 ~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~ 331 (382)
T 1cs6_A 252 WLSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHAQPDWLDVITDTEADIGSDLRWSCVASGKPRPAVRWLRD 331 (382)
T ss_dssp CSBSSSEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEEEETTCCEEEECEEEEESCCEEEEEET
T ss_pred EecCCcEEEEccCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCCcccCCCccEEcCCCeEEEEEEeeeecCCEEEEEEC
Confidence 11223359999999999999999999999999999999999999998888888999999999999999999999999999
Q ss_pred CEEeecCCceEEEEcCCeEEEEEcccCcccceEEEEEEEcCCeeeEEEEEEEEe
Q psy7042 1828 GRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINIT 1881 (2245)
Q Consensus 1828 g~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 1881 (2245)
|..+....++.+. + ..|.|.++..+|+|.|+|.|.|..|.....+.|.|.
T Consensus 332 g~~~~~~~~~~~~--~--~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 381 (382)
T 1cs6_A 332 GQPLASQNRIEVS--G--GELRFSKLVLEDSGMYQCVAENKHGTVYASAELTVQ 381 (382)
T ss_dssp TEECCCCSSEEEE--T--TEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CEECCCCceEEEE--C--CEEEECcCCcccCEEEEEEEEeCCCeEEEEEEEEEe
Confidence 9999877665543 2 279999999999999999999999999999999885
No 41
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.97 E-value=1.9e-31 Score=343.91 Aligned_cols=366 Identities=16% Similarity=0.219 Sum_probs=255.0
Q ss_pred ceecCCcceEEeCCCeEEEEEEEeeecC----CceEEEECC--eec------------cCCCeEEEEEcCcEEEEEEeee
Q psy7042 92 DFIVPLKDLVVPLGKLLTLQCEATGTPV----PKCRWLRNG--REI------------SSGARYRVETAGGVFRLHFNEV 153 (2245)
Q Consensus 92 ~~~~~~~~~~v~~G~~v~L~C~~~g~p~----~~i~W~~~g--~~l------------~~~~~~~~~~~~~~~~L~i~~~ 153 (2245)
.|+..|..+.+.+|+.++|.|.+.+.|. +.|.|+|++ ..+ ....|+.+...++..+|.|.++
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 82 (438)
T 1qgc_4 3 VLTQSPASLAVSLGQRATISCRASESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSGSRTDFTLTIDPV 82 (438)
T ss_dssp CEEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEEETTEEEEEESSC
T ss_pred ceEecCCeEEeeCCCCEEEEEecCCCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEccCCcEEEEeCCC
Confidence 3556678889999999999999988876 489999963 322 1235788777777788999999
Q ss_pred ccCCCeEEEEEEEcCcccc-eeEEEEEecC---CCeeecCCCceEEcCCCeEEEEEEEec-CCCc-eEEEeeCceeeecC
Q psy7042 154 TDVDNGDYTCEAYNSVGFA-HTSSRVKIGT---PPRIDRMPNALYIPEGDNTKVKIFYAG-DQPM-EVSLTKNGRVVQSD 227 (2245)
Q Consensus 154 ~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~---~P~~~~~~~~~~v~~G~~~~l~C~~~g-~p~~-~i~W~~~g~~l~~~ 227 (2245)
+.+|+|.|+|.|.|..+.. ...+.|.|.. +|.+...+....+.+|+.+.|.|.+.| .|.+ .|+|+|||..+...
T Consensus 83 ~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~ 162 (438)
T 1qgc_4 83 EADDVATYYCQQSNEVPLTFGAGTKLDLKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNG 162 (438)
T ss_dssp CGGGCEEEEEEECSSTTCCBCCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEETTEEECTT
T ss_pred cCcCCeeEEEEEecCCCccccCceeEEecCCCCCCEEEecCCChhhccCCceEEEEEEccccCCCcEEEEEECCEEcCCC
Confidence 9999999999999988754 3456777764 677666444444456889999999987 6777 99999999988655
Q ss_pred CceEEEE--eC-----CeEEEEEcccCccCceeEEEEEEcCCcceEEEEEEEEecCCCCCCCCcccceeeccceEEEecC
Q psy7042 228 DRFKFTV--LD-----DYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNP 300 (2245)
Q Consensus 228 ~~~~~~~--~~-----~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~s~~~~w~p 300 (2245)
....... .. ..+.|.|.++..+|+|.|+|.|.|..|... +.+.+....
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~--~~~~~~~~~----------------------- 217 (438)
T 1qgc_4 163 VLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSP--IVKSFNRNE----------------------- 217 (438)
T ss_dssp EEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSC--EEEEEETTC-----------------------
T ss_pred ceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCCc--eeccccccc-----------------------
Confidence 1111110 01 134799999999999999999998766531 111111000
Q ss_pred CCCCCCceeEEEEEEEEecCCCceEEeeeccCcceEEEcCCCCCCEEEEEEEEEecCCCCCCCCCCCceecCCCCCCCCC
Q psy7042 301 PKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSP 380 (2245)
Q Consensus 301 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~c~a~n~~g~~~~~~~~~~~~~~~~~~~p~~ 380 (2245)
T Consensus 218 -------------------------------------------------------------------------------- 217 (438)
T 1qgc_4 218 -------------------------------------------------------------------------------- 217 (438)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCcEEEeecCCeeEEEecCCCCCCCCCccEEEEEeeecCCCCcEEEeeeecCCceeecCCcccCceEEEEEEeecCCCC
Q psy7042 381 PGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGL 460 (2245)
Q Consensus 381 ~~~~~v~~~~~~~~~l~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~ 460 (2245)
T Consensus 218 -------------------------------------------------------------------------------- 217 (438)
T 1qgc_4 218 -------------------------------------------------------------------------------- 217 (438)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCcEEecCCcccCCCceeccccccccccccceeeEEEEeccC--cCeEEEEeC--CeecC--------------
Q psy7042 461 SLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCP--KPTISWLKG--SREIT-------------- 522 (2245)
Q Consensus 461 ~~~s~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p--~~~v~W~~~--~~~i~-------------- 522 (2245)
++.++..+....+.+|+++.|.|.+.|.| .+.+.|+|+ +..+.
T Consensus 218 -------------------~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~ 278 (438)
T 1qgc_4 218 -------------------CEVMLVESGGGLVKPGGSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYY 278 (438)
T ss_dssp --------------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEEC
T ss_pred -------------------ceeEEecCCceEEecCCcEEEEEEEcccccCCcEEEEEECCCCCCcEEEEEEeecCCceec
Confidence 00000111234467899999999999988 679999996 43321
Q ss_pred ---CCccEEEEee--CCeEEEEEecccccCCceEEEEEEeCCC-----CCCcceeEeEecC----CCCCCCCCcccceEe
Q psy7042 523 ---PSARHHIFAE--GDTYTLIINSVYGVDADEYVCRAVNKGG-----VKSTKAELIIMTA----PKFNVPPRFRDTAYF 588 (2245)
Q Consensus 523 ---~~~~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~a~n~~g-----~~~~~~~l~v~~~----p~~~~~p~~~~~~~~ 588 (2245)
...++.+..+ +....|.|.+++.+|+|.|+|.|.|..| .......|.|... |.+...+. ...+
T Consensus 279 ~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~---~~~~ 355 (438)
T 1qgc_4 279 PDSVKGRFTISRDNAKNTLYLQMSSLRSADTAMYYCVRREDGGDEGFAYWGQGTVVTVSAAKTTPPSVYPLAP---GSAA 355 (438)
T ss_dssp CGGGTTTEEEEEETTTTEEEEEECSCCGGGCCEEEEEECCSSSCCCCCSBCCCEEEEECSSCCBCCEEEEECC---CGGG
T ss_pred CcccCCcEEEEeecCCCeEEEEECCCChhhCEEEEEEEEccCCCccceeeCCCEEEEEecCCCCCCeEEEcCc---cccc
Confidence 1345665544 3466899999999999999999999655 2234567777642 22211111 1124
Q ss_pred eCCCeEEEEEeeeec-CCC-eEEEEeCCeEeeccCeEEEEecCC---eEEEEEcCCCCCcCEEEEEEEEeCCCCceeEEE
Q psy7042 589 DKGENVVVKIPFTGY-PKP-KITWYRDNEVIESGGHFHVETSER---HAILTIRDASNVDTAPYRVVAENDLGMDSAIVK 663 (2245)
Q Consensus 589 ~~g~~~~l~C~~~g~-p~~-~i~W~~~~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~ 663 (2245)
..|+.++|.|.+.|. |.+ .|+|+++|..+.......+...+. .+.|.|.++..+| |.|+|.|.|..|.......
T Consensus 356 ~~g~~v~L~C~~~g~~P~~~~v~W~~~g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~g~~~~~~~ 434 (438)
T 1qgc_4 356 AAASMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKK 434 (438)
T ss_dssp CCSSEEEEEEEEESCBSSCCEEEEGGGTCCSSEEECCCEEETTEEEEEEEEEEEEEHHHH-SCCEEEEEEGGGTEEEEEE
T ss_pred ccCCcEEEEEEeccccCCCcEEEEecCCCCCceeecCccccCCcEEEEEEEEEehhhcCC-ceEEEEEEeCCCCcceeee
Confidence 579999999999997 877 999999998764221111111111 2468999998889 9999999999998766554
Q ss_pred EE
Q psy7042 664 IQ 665 (2245)
Q Consensus 664 l~ 665 (2245)
+.
T Consensus 435 i~ 436 (438)
T 1qgc_4 435 IV 436 (438)
T ss_dssp CC
T ss_pred cC
Confidence 43
No 42
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.97 E-value=1.9e-30 Score=328.59 Aligned_cols=366 Identities=17% Similarity=0.233 Sum_probs=261.2
Q ss_pred cccCCcceeeEEecCCeEEEEeeeecCCCCceeEec-CCccccCCCCcEEEeeecceeEEEEccCCcCC------ceEEE
Q psy7042 1423 VMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFA-NDSIIDDSDTRVHKQLTMNSASLVVKNSQRSD------GGQYR 1495 (2245)
Q Consensus 1423 ~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~-~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d------~G~Y~ 1495 (2245)
.+...+...+.+.+|+.+.|.|.+.|.|.|.++|+| ++..+........ .....+|.|.+++.+| +|.|+
T Consensus 5 ~f~~~p~~~~~~~~G~~v~l~C~~~g~p~p~v~W~k~~g~~~~~~~~~~~---~~~~~~L~i~~~~~~d~~~~~d~G~Y~ 81 (388)
T 2v5m_A 5 VFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQ---ISSDGKLVFPPFRAEDYRQEVHAQVYA 81 (388)
T ss_dssp EEEECCCSEEEEETTTCEEEECEEEEESCCEEEEEETTSCBCCCBTTTBE---ECSTTEEEECCCCGGGCCHHHHEEEEE
T ss_pred chhhCCCceEEEEcCccEEEEEECCCCCCCEEEEEcCCCCccccCCCceE---EcCCceEEecccChhhccccccCceEE
Confidence 333333445789999999999999999999999999 7887765432222 2345579999999997 99999
Q ss_pred EEEEcCCcce-eeEEEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccchhccccccCcccccCCeEEEEecCCC
Q psy7042 1496 LQLKNPAGFD-TATLHSRLRTLPDSVNPRCHLPSSTSKERPKFPTHPNHQPWLKWARASLTSKGVDSTEDSISLVWSKPR 1574 (2245)
Q Consensus 1496 c~a~n~~g~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~w~~p~ 1574 (2245)
|.|.|..|.. +..+.+.+...|.... .+. ......++.++|.|..+.
T Consensus 82 C~a~n~~g~~~s~~~~v~v~~~p~~~~------------------~~~--------------~~~v~~G~~v~l~C~~~~ 129 (388)
T 2v5m_A 82 CLARNQFGSIISRDVHVRAVVAQYYEA------------------DVN--------------KEHVIRGNSAVIKCLIPS 129 (388)
T ss_dssp EEEEETTEEEECCCEEEEEECCCCCCC------------------BCC--------------CEEEETTSCEEECCBCCT
T ss_pred EEEEccCCeEEecceEEEEcccccccc------------------Ccc--------------ceeeecCCcEEEEEECcC
Confidence 9999998864 3455666654332110 000 011234556777776532
Q ss_pred CCCCCccceEEEEEEecCCccceEeeccccCCccceEEEEeecCccCCCCCCccceeeEeeeCCeeeEEeccceeeeceE
Q psy7042 1575 HDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSF 1654 (2245)
Q Consensus 1575 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1654 (2245)
..+ .....+.|+++|..+...... .+.+..+. ...+|
T Consensus 130 ~~~-----------------------------~~~~~v~W~~~~~~~~~~~~~--------~~~~~~~~------~~~~L 166 (388)
T 2v5m_A 130 FVA-----------------------------DFVEVVSWHTDEEENYFPGAE--------YDGKYLVL------PSGEL 166 (388)
T ss_dssp TTT-----------------------------TTEEEEEEEETTCCEECSSSC--------BTTTEEEC------TTSCE
T ss_pred CCC-----------------------------CCcceEEEEeCCCcccccccC--------CCCcEEEc------cCCcE
Confidence 111 122458999999886432110 00011010 12389
Q ss_pred EEeccCCCCe-EEEEEEEEcCCCcC-CCCCcCcceEEeeecCCCCCceec-cCCceEEcCCCeEEEEEEecCcCCCeEEE
Q psy7042 1655 SVLNLVEGND-YEFRIIAVNAIGKS-EPSICTTPVKICEFVGGEKPDFIV-PLKDLVVPLGKLLTLQCEATGTPVPKCRW 1731 (2245)
Q Consensus 1655 ~i~~~~~~d~-g~y~c~a~n~~g~~-~~~~~~~~v~~~~~~~~~~p~~~~-~~~~~~~~~G~~v~L~C~~~~~p~~~v~W 1731 (2245)
.|.+++.+|. |.|+|.|.|..+.. ..+.....+.+.......+|.+.. ......+.+|+.++|.|.+.|.|.+.+.|
T Consensus 167 ~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W 246 (388)
T 2v5m_A 167 HIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPLELMVAHTISLLCPAQGFPAPSFRW 246 (388)
T ss_dssp EESSCCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCSCEEEECCSSCCCCEEEETTSCEEECCCCEEESCCEEEE
T ss_pred EEecCCccccCeeEEEEeccCCCCceeeccccceEEEecCCcCCCCcCccccCCceEEeeCCcEEEEEECCCCCCCEEEE
Confidence 9999999999 99999999986432 212122233333221111122211 12346688999999999999999999999
Q ss_pred eeCCEec------cCCceEEEEecCcEEEEEEeeeccCCCeEEEEEEecCceeeEEEEEEEecCCCccccCCCceEEcCC
Q psy7042 1732 LRNGREI------SSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEG 1805 (2245)
Q Consensus 1732 ~~~~~~l------~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g 1805 (2245)
++++..+ ....++... ++ .|.|.+++.+|+|.|+|.|.|..|.....+.|.|..+|.+...+....+.+|
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~--~~--~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~v~~g 322 (388)
T 2v5m_A 247 YKFIEGTTRKQAVVLNDRVKQV--SG--TLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAKIDPPTQTVDFG 322 (388)
T ss_dssp EEECTTSSCEEECCCSSSEEEE--TT--EEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEEEESSEEEECTT
T ss_pred EecCCCCcccccccccCceecc--cC--EEEECcCCHHHCeEEEEEEecCCCceeEEEEEEEeCCCccccCCCcEEecCC
Confidence 9975432 223333322 22 4999999999999999999999999989999999999988877888899999
Q ss_pred CeEEEEEEEeccCCcEEEEEECCEEeecCCceEEEEcCCeEEEEEcccCcccceEEEEEEEcCCeeeEEEEEEEE
Q psy7042 1806 DNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINI 1880 (2245)
Q Consensus 1806 ~~~~l~C~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v 1880 (2245)
+++.|.|.+.|.|.+.|.|+++|..+.... ..|.|.++..+|+|.|+|.|.|..|..+.++.|.|
T Consensus 323 ~~~~l~C~~~g~p~p~i~W~~~g~~i~~~~----------~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 387 (388)
T 2v5m_A 323 RPAVFTCQYTGNPIKTVSWMKDGKAIGHSE----------SVLRIESVKKEDKGMYQCFVRNDRESAEASAELKL 387 (388)
T ss_dssp SCEEEEEEEEEECCCEEEEEETTEECSCCS----------SEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred CCEEEEEEeccccCCeEEEEECCEECccCC----------CEEEEecCChhhCEEEEEEEEcCCCcEEEEEEEEe
Confidence 999999999999999999999999885432 37999999999999999999999999999988876
No 43
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.97 E-value=1.2e-29 Score=308.72 Aligned_cols=289 Identities=37% Similarity=0.625 Sum_probs=256.1
Q ss_pred CCCceeccccccccccccceeeEEEEeccCcCeEEEEeCCeecCCC-ccEEEEe-eCCeEEEEEecccccCCceEEEEEE
Q psy7042 479 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPS-ARHHIFA-EGDTYTLIINSVYGVDADEYVCRAV 556 (2245)
Q Consensus 479 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~i~~~-~~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~a~ 556 (2245)
.+|.|...+.+..+.+|+++.|.|.+.|.|.+.+.|+|++..+... .++.+.. .++.+.|.|.+++.+|+|.|+|.|.
T Consensus 3 ~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 82 (305)
T 2nzi_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRAT 82 (305)
T ss_dssp CCCEEEECCCCEEECTTCCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEEEE
T ss_pred CCCeeeecccceEEeCCCcEEEEEEEeCCCCCeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEEEE
Confidence 5789999999999999999999999999999999999999988754 3555443 4566799999999999999999999
Q ss_pred eCCCCCCcceeEeEecCCCCCCCCCcc--cceEeeCCCeEEEEEeeeecCCCeEEEEeCCeEeeccCeEEEEecCCeEEE
Q psy7042 557 NKGGVKSTKAELIIMTAPKFNVPPRFR--DTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAIL 634 (2245)
Q Consensus 557 n~~g~~~~~~~l~v~~~p~~~~~p~~~--~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~l 634 (2245)
|..|.....+.|.|..+|.+..++... ....+..|+.+.|.|.+.|.|.+.+.|++++..+....++.+........|
T Consensus 83 n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~l 162 (305)
T 2nzi_A 83 NQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSL 162 (305)
T ss_dssp ETTEEEEEEEEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCCEEEEEESSSBCCSSSSCEEEECSSEEEE
T ss_pred cCCCCccceEEEEEecCCccCCCccccccccEEecCCCEEEEEEEECCCCCCEEEEEECCEECCCCCcEEEEEcCCceEE
Confidence 999998888999998877765443211 245678899999999999999999999999999988888888777778899
Q ss_pred EEcC-CCCCcCEEEEEEEEeCCCCceeEEEEEeeCCCCCCCCCeeeeecCCcEEEEeeCCCCCCCcccccEEEEeeeCCC
Q psy7042 635 TIRD-ASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPM 713 (2245)
Q Consensus 635 ~i~~-~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~P~~p~~~~~~~~~~~si~lsW~~p~~~~~~~~~~y~v~~~~~~~ 713 (2245)
.|.+ +...|.|.|+|.|.|..|..+..+.|.|..+|.+|.++.+..+..+++.|+|.+|..+++..+..|.+++++.+.
T Consensus 163 ~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~p~~~~~~~~~~~~v~l~w~~p~~~g~~~i~~y~v~~~~~~~ 242 (305)
T 2nzi_A 163 VFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVPDPPRGVKVSDVSRDSVNLTWTEPASDGGSKITNYIVEKCATTA 242 (305)
T ss_dssp EETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEEEEEESCCSSCEEEEEECCSCCSBSCEEEEEEEEEETTS
T ss_pred EEecCCccCccEEEEEEEEeCCCceeeEEEEEEecCCCCCCCceeeeccCCEEEEEEcCCccCCCCceeEEEEEEecCCC
Confidence 9999 999999999999999999999999999999999999999988999999999998888888899999999999999
Q ss_pred CCeEEEceeeeeeEEEecCCCCCEEEEEEEEEecccCCCCCCCCccEEecCccc
Q psy7042 714 SSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDTFK 767 (2245)
Q Consensus 714 ~~w~~~~~~~~~~~~i~~L~p~t~y~~~v~a~n~~G~~~~s~~~~~~~~~~~~~ 767 (2245)
..|..........+.|.+|.+++.|.|+|.|.|..|.+.+|..+..+++++..+
T Consensus 243 ~~w~~~~~~~~~~~~i~~l~~~~~y~~~~~A~N~~G~~~~S~~~~~~~t~~~~p 296 (305)
T 2nzi_A 243 ERWLRVGQARETRYTVINLFGKTSYQFRVIAENKFGLSKPSEPSEPTITKEDKT 296 (305)
T ss_dssp CCEEEEEEESSSEEEECSCCSSCEEEEEEEEEETTEECCCCCCCCCEECCC---
T ss_pred CccEECccccCceEEecCCCCCCeEEEEEEEEeCCcccCCcCCCCCEEcCCccc
Confidence 999988776678899999999999999999999999999999999888777654
No 44
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.97 E-value=4.2e-29 Score=303.96 Aligned_cols=281 Identities=27% Similarity=0.525 Sum_probs=248.0
Q ss_pred CCCCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECCeeccCC-CeEEEEE-cCcEEEEEEeeeccCCCeEEEEEE
Q psy7042 88 GEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSG-ARYRVET-AGGVFRLHFNEVTDVDNGDYTCEA 165 (2245)
Q Consensus 88 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~-~~~~~~~-~~~~~~L~i~~~~~~d~G~Y~C~a 165 (2245)
..+|.|+..|.++.+.+|+.++|.|.+.|.|.+.|.|+|+|..+... .++.+.. .++...|.|.+++.+|+|.|+|.|
T Consensus 2 ~~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 81 (305)
T 2nzi_A 2 AMAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRA 81 (305)
T ss_dssp CCCCEEEECCCCEEECTTCCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEEE
T ss_pred CCCCeeeecccceEEeCCCcEEEEEEEeCCCCCeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEEE
Confidence 35899999999999999999999999999999999999999998754 4666643 566678999999999999999999
Q ss_pred EcCcccceeEEEEEecCCCeeecC-----CCceEEcCCCeEEEEEEEecCCCceEEEeeCceeeecCCceEEEEeCCeEE
Q psy7042 166 YNSVGFAHTSSRVKIGTPPRIDRM-----PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYII 240 (2245)
Q Consensus 166 ~n~~g~~~~~~~l~V~~~P~~~~~-----~~~~~v~~G~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~ 240 (2245)
.|..|..+.++.|.|..+|.+... +....+.+|+.+.|.|.+.|.|.+.|.|++++..+....++.+...+....
T Consensus 82 ~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~ 161 (305)
T 2nzi_A 82 TNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTS 161 (305)
T ss_dssp EETTEEEEEEEEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCCEEEEEESSSBCCSSSSCEEEECSSEEE
T ss_pred EcCCCCccceEEEEEecCCccCCCccccccccEEecCCCEEEEEEEECCCCCCEEEEEECCEECCCCCcEEEEEcCCceE
Confidence 999999888999999888776433 467888999999999999999999999999999998888888877777789
Q ss_pred EEEcc-cCccCceeEEEEEEcCCcceEEEEEEEEecCCCCCCCCcccceeeccceEEEecCCCCCCCceeEEEEEEEEec
Q psy7042 241 IFIKE-IRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDI 319 (2245)
Q Consensus 241 L~i~~-~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~s~~~~w~pp~~~~~~~~~~~~~~~~~~ 319 (2245)
|.|.+ +..+|+|.|+|.|.|..|....++.|.|..+|.+|.. +.+......++.++|.+|...++.++..|.+++.+.
T Consensus 162 l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~p~~-~~~~~~~~~~v~l~w~~p~~~g~~~i~~y~v~~~~~ 240 (305)
T 2nzi_A 162 LVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVPDPPRG-VKVSDVSRDSVNLTWTEPASDGGSKITNYIVEKCAT 240 (305)
T ss_dssp EEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEE-EEEESCCSSCEEEEEECCSCCSBSCEEEEEEEEEET
T ss_pred EEEecCCccCccEEEEEEEEeCCCceeeEEEEEEecCCCCCCC-ceeeeccCCEEEEEEcCCccCCCCceeEEEEEEecC
Confidence 99999 9999999999999999999999999999998877654 455667788999999998888889999999999998
Q ss_pred CCCceEEeeeccCcceEEEcCCCCCCEEEEEEEEEecCCCCCCCCCCCcee
Q psy7042 320 SMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIK 370 (2245)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~c~a~n~~g~~~~~~~~~~~~ 370 (2245)
....|....... ...+.|.+|.+++.|.|+|.|.|..|.+.++..+..+.
T Consensus 241 ~~~~w~~~~~~~-~~~~~i~~l~~~~~y~~~~~A~N~~G~~~~S~~~~~~~ 290 (305)
T 2nzi_A 241 TAERWLRVGQAR-ETRYTVINLFGKTSYQFRVIAENKFGLSKPSEPSEPTI 290 (305)
T ss_dssp TSCCEEEEEEES-SSEEEECSCCSSCEEEEEEEEEETTEECCCCCCCCCEE
T ss_pred CCCccEECcccc-CceEEecCCCCCCeEEEEEEEEeCCcccCCcCCCCCEE
Confidence 888888765443 67899999999999999999999999999988776655
No 45
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.97 E-value=5.2e-30 Score=311.09 Aligned_cols=280 Identities=23% Similarity=0.384 Sum_probs=213.5
Q ss_pred CCCCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECCeeccCCCeEEEE--EcCcEEEEEEeeecc-CCCeEEEEE
Q psy7042 88 GEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVE--TAGGVFRLHFNEVTD-VDNGDYTCE 164 (2245)
Q Consensus 88 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~--~~~~~~~L~i~~~~~-~d~G~Y~C~ 164 (2245)
..+|.|...|.++.+.+|+.++|.|.+.|.|.+.|.|+|+|..+... ++.+. ..+....|.|.+++. +|+|.|+|.
T Consensus 4 ~~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~g~~i~~~-~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~ 82 (304)
T 2yd9_A 4 EEPPRFIKEPKDQIGVSGGVASFVCQATGDPKPRVTWNKKGKKVNSQ-RFETIEFDESAGAVLRIQPLRTPRDENVYECV 82 (304)
T ss_dssp CCCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEC-------CT-TEEEEEETTTTEEEEEECSCCTTTTCSEEEEE
T ss_pred ccCCeeeecCCceEecCCCeEEEEEEEEEeCCCeEEEEECCEECCCC-ceEEEEecCCCceEEEEecccccCCCeEEEEE
Confidence 46899999999999999999999999999999999999999998654 44443 233346899999998 999999999
Q ss_pred EEcCcccceeEEEEEecCC-------CeeecCCCceEEcCCCeEEEEEEEecCCCceEEEeeCceeeecCCc-eEEEEeC
Q psy7042 165 AYNSVGFAHTSSRVKIGTP-------PRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDR-FKFTVLD 236 (2245)
Q Consensus 165 a~n~~g~~~~~~~l~V~~~-------P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~-~~~~~~~ 236 (2245)
|.|..|..+.++.|.|..+ |.+...|....+.+|+.+.|.|.+.|.|.+.|.|+|+|..+..... ..+...
T Consensus 83 a~n~~g~~~~~~~l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~- 161 (304)
T 2yd9_A 83 AQNSVGEITVHAKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQL- 161 (304)
T ss_dssp EECSSCEECCEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEECCEEECSSCCEEEEEETTEECCGGGGTTSEEEC-
T ss_pred EECCCCeEEEEEEEEEeccccCCCCCCeeecCCccEEEeCCCeEEEEEECccCCCCeEEEEECCEECcCCCCcceEEeC-
Confidence 9999999888999999775 7788888889999999999999999999999999999998875431 122222
Q ss_pred CeEEEEEcccCccCceeEEEEEEcCCcceEEE-EEEEEecCCCCCCCCcccceeeccceEEEecCCCCCCCceeEEEEEE
Q psy7042 237 DYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGT-FTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVE 315 (2245)
Q Consensus 237 ~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~~~p~~~~~~~~~~~~~~~s~~~~w~pp~~~~~~~~~~~~~~ 315 (2245)
....|.|.++..+|+|.|+|.|.|..|..... +.|.|....
T Consensus 162 ~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~~-------------------------------------- 203 (304)
T 2yd9_A 162 RSGALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQN-------------------------------------- 203 (304)
T ss_dssp TTSCEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECCC--------------------------------------
T ss_pred CCeEEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEeec--------------------------------------
Confidence 22379999999999999999999988765432 444443110
Q ss_pred EEecCCCceEEeeeccCcceEEEcCCCCCCEEEEEEEEEecCCCCCCCCCCCceecCCCCCCCCCCCCcEEEeecCCeeE
Q psy7042 316 RRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVN 395 (2245)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~c~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~v~~~~~~~~~ 395 (2245)
T Consensus 204 -------------------------------------------------------------------------------- 203 (304)
T 2yd9_A 204 -------------------------------------------------------------------------------- 203 (304)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEecCCCCCCCCCccEEEEEeeecCCCCcEEEeeeecCCceeecCCcccCceEEEEEEeecCCCCCCCCCCCCcEEecCC
Q psy7042 396 LSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDP 475 (2245)
Q Consensus 396 l~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~s~~~~~v~~~~~ 475 (2245)
T Consensus 204 -------------------------------------------------------------------------------- 203 (304)
T 2yd9_A 204 -------------------------------------------------------------------------------- 203 (304)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCCceeccccccccccccceeeEEEEeccCcCeEEEEeCCeecCCCccEEEEeeCCeEEEEEecccccCCceEEEEE
Q psy7042 476 MAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRA 555 (2245)
Q Consensus 476 ~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 555 (2245)
.+|.|...+.+..+.+|+.+.|.|.+.|.|.+.+.|++++..+....+.. .+...|.|.++ +|+|.|+|.|
T Consensus 204 ---~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~----~~~~~L~i~~~--~d~G~Y~C~a 274 (304)
T 2yd9_A 204 ---VAPRFSILPMSHEIMPGGNVNITCVAVGSPMPYVKWMQGAEDLTPEDDMP----VGRNVLELTDV--KDSANYTCVA 274 (304)
T ss_dssp ---EEEEEEECCCCBCCCTTCCEEEEEEEEEESCCEEEEEETTEECSCSSSCC----BSEEEEEECSC--CSCEEEEEEE
T ss_pred ---cCCcEEecCCceEEcCCCeEEEEEEEeeeCCCEEEEEECCEECCCccccc----CCcEEEEEccc--ccCEEEEEEE
Confidence 12223333344567789999999999999999999999999987665422 33446777766 6999999999
Q ss_pred EeCCCCCCcceeEeEecCCCC
Q psy7042 556 VNKGGVKSTKAELIIMTAPKF 576 (2245)
Q Consensus 556 ~n~~g~~~~~~~l~v~~~p~~ 576 (2245)
.|..|....++.|.|..++.+
T Consensus 275 ~N~~G~~~~~~~l~V~~~~~~ 295 (304)
T 2yd9_A 275 MSSLGVIEAVAQITVKSLPKA 295 (304)
T ss_dssp EETTEEEEEEEEEC-------
T ss_pred EeCCCcEEEEEEEEEecCccc
Confidence 999999999999999876654
No 46
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}
Probab=99.97 E-value=1.2e-29 Score=340.24 Aligned_cols=534 Identities=17% Similarity=0.204 Sum_probs=337.0
Q ss_pred cccccccccccceeeEEEEe-------ccCcCeEEEEeCCeecCCCccEEEEeeCCeEEEEEecccccCCceEEEEEEeC
Q psy7042 486 PLRNANAIQNHNAQFQCTIT-------GCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNK 558 (2245)
Q Consensus 486 ~~~~~~~~~g~~~~l~C~~~-------g~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~ 558 (2245)
.+++..+..|++++|.|.+. +.+.+.|.|.+++..+.... +.+ .++....|.|.++...|++ |.|.+...
T Consensus 9 ~p~~~~v~~G~~v~l~C~~~~~~~~~~~~~~~~i~W~~~~~~i~~~~-~~~-~~~~~~~l~i~~~~~~~~~-y~C~~~~~ 85 (589)
T 3l5h_A 9 SPESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKEQ-YTI-INRTASSVTFTDIASLNIQ-LTCNILTF 85 (589)
T ss_dssp SCSCCCCCSSSCCCCCC-CCTTTTTTTTCCTTTCCCBCSSSBSCGGG-CBC-CSSSCCBCCCCCCCSSCCC-CCCC-CCT
T ss_pred ecCCCEEeCCCCEEEEEEEeCccCccccccccceEEEeCCEECChHH-ccc-cCCcEeEEEEecCCCccee-eEEecccC
Confidence 45677788999999999997 66778999999997776543 222 2344568999999988765 66877532
Q ss_pred C--CCCCcceeEeEecCCCCCCCCCcccceEeeCCCeEEEEEeeeecCCCeEEEEeCCeEeeccCeEEEEe---------
Q psy7042 559 G--GVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVET--------- 627 (2245)
Q Consensus 559 ~--g~~~~~~~l~v~~~p~~~~~p~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~--------- 627 (2245)
. +.....+.|.|..+| +....|.|...+.....++|....... ....|.+..
T Consensus 86 ~~~~~~~~~~~l~v~~pP----------------~~P~nl~c~~~~~~~~~~~W~~~~~~~-~~~~y~l~~~~~~~~~~~ 148 (589)
T 3l5h_A 86 GQLEQNVYGITIISGLPP----------------EKPKNLSCIVNEGKKMRCEWDGGRETH-LETNFTLKSEWATHKFAD 148 (589)
T ss_dssp TCC-CCCCCCCCCC-CCC----------------CCCEEEEEEEETTSCEEEEEECCSCCS-SCEEEEECCBCSSSBCCC
T ss_pred CCcccEEEeEEEeccCCC----------------CCCEeeEEEECCCceEEEEECCCCcCC-cCceEEEEEEEcCCCccc
Confidence 1 122334455554433 344568888877777788888743211 111222221
Q ss_pred ----cCCeEEEEEc-CCCCCcCEEEEEEEEeCCCCc-eeEEEEEe--eCCCCCCCCCee--eeecCCcEEEEeeCCCCCC
Q psy7042 628 ----SERHAILTIR-DASNVDTAPYRVVAENDLGMD-SAIVKIQI--SDRPDPPQFPTV--EDIGHDSLALVWRAPIWDG 697 (2245)
Q Consensus 628 ----~~~~~~l~i~-~~~~~d~g~y~C~a~n~~g~~-~~~~~l~v--~~~P~~p~~~~~--~~~~~~si~lsW~~p~~~~ 697 (2245)
......+.|. ++.+...|.|+|.|.|..|.. +....+.. ..+|.+|.++.+ .....+++.|+|++|...
T Consensus 149 c~~~~~~~~~c~~~~~l~~~~~Y~~~v~a~n~~G~~~s~~~~~~~~~~~~p~pP~~~~~~~~~~~~~~v~l~W~~p~~~- 227 (589)
T 3l5h_A 149 CKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIK- 227 (589)
T ss_dssp EECBTTBSSCCBCCSCCCSSSCEEECEEEEESSCCBCCCCEEECGGGSEECCCCCSCEEECTTTCTTCEEEECCCCGGG-
T ss_pred CCCCCCCcEEEEECCCCchheeEEEEEEEEeCCCCcccccEEEccccEEEcCCCceEEEEecCCCCCeEEEEeCCCCCC-
Confidence 1112334455 677788999999999999975 33334433 347899999988 457899999999987544
Q ss_pred CcccccEEEEeeeCCCCCeEEEc----eeeeeeEEEecCCCCCEEEEEEEEEecccCCCCCCCCccEEecCccccccccc
Q psy7042 698 GSNITNYIVEKREHPMSSWIRVG----NTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDTFKKQIKKR 773 (2245)
Q Consensus 698 ~~~~~~y~v~~~~~~~~~w~~~~----~~~~~~~~i~~L~p~t~y~~~v~a~n~~G~~~~s~~~~~~~~~~~~~~~~~~~ 773 (2245)
++.+..|.|+|+......|.... ......+.+.+|.|++.|.|+|+|.|..|.+.+|.++..+...
T Consensus 228 ~~~~~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~S~~S~~~~~~---------- 297 (589)
T 3l5h_A 228 SVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGI---------- 297 (589)
T ss_dssp GTSCEEEEEEEEETTCSCCBCCCTTSSCSCCSEEEECSCCSSCCEEEEEEEEESSSCSCCCCCCCCBCCC----------
T ss_pred CeeeEEEEEEECCCCCCCcEEEccccCcCceeEEEECCCCCCCEEEEEEEEEeCCCCCccCCCCCccccc----------
Confidence 44789999999998888887653 2234789999999999999999999999998887654432110
Q ss_pred cccccCCCceeecccccccccCCceEEEEeeeccCccccccccceecccccccccccCceeEEEEeeecccCCeeEEEee
Q psy7042 774 QYDFDETGKKIRGKADEKVSDYDQYVFDIYSKYVPQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFI 853 (2245)
Q Consensus 774 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 853 (2245)
T Consensus 298 -------------------------------------------------------------------------------- 297 (589)
T 3l5h_A 298 -------------------------------------------------------------------------------- 297 (589)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCchhhhhhheeeeeeeccCCCceEeecccccCCcceEEEEEEecCC-CCCcccEEe----eeeCceEEEEecCC-CC
Q psy7042 854 PVSHNLEKELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFEVLDRP-HPPENLHAD----EFAGDSLTLYWTPP-RD 927 (2245)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~~p~~l~~~----~~~~~~~~l~W~~p-~~ 927 (2245)
+..+.| .+|..+... ..+.+++.|.|+++ ..
T Consensus 298 -------------------------------------------T~~~~P~~~p~~~~~v~~~~~~~~~~v~l~W~p~~~~ 334 (589)
T 3l5h_A 298 -------------------------------------------TYEDRPSKAPSFWYKIDPSHTQGYRTVQLVWKTLPPF 334 (589)
T ss_dssp -------------------------------------------CCCCCCCSCCCEEEECCSCSSTTSCCEEEEECCCCTT
T ss_pred -------------------------------------------cCccCCCCCCcEEEEeecCcCCCcceEEEEEeeCCch
Confidence 001234 456544432 34678999999974 33
Q ss_pred CCCCccceEEEeeeecCCCceEEecceeeeceEEEecCCCCceeeEEEEEEeccccCCCccccCcccccCCCCCCCCCCC
Q psy7042 928 NGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGA 1007 (2245)
Q Consensus 928 ~~g~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~s~~~~~~~~~t~~~~p~~p~~ 1007 (2245)
..++.+.+|+|.+...+.. +.. .......++ .|.+++.|.|+|.|.|..|.|+.+.. .........|.+|..
T Consensus 335 ~~~g~i~~Y~v~~~~~~~~-~~~--~~~~~~~~~--~l~~~~~Y~~~V~A~n~~G~~~~s~~---~~~~~~~~~~~p~~~ 406 (589)
T 3l5h_A 335 EANGKILDYEVTLTRWKSH-LQN--YTVNATKLT--VNLTNDRYLATLTVRNLVGKSDAAVL---TIPACDFQATHPVMD 406 (589)
T ss_dssp TSSSCCCEEEEEECCTTSC-CCB--CCCSSSCCE--ECCCSSCCCEEEEEEBTTBCCCCCCC---CCCCTTCCCCSCCCS
T ss_pred hccCceeeEEEEEecCCCC-cee--eccCCceEE--EEeCCCCEEEEEEEEeCCccCCCeEE---EeecccccCCCCcce
Confidence 3334999999999764432 222 222333343 38899999999999999999987732 222222234556678
Q ss_pred CeeEeecCCeEEEEecCCCCCCCCccceEEEEEEecCCccceeccccccCCcceeEEEEeecccccCCccCchhhhhhhh
Q psy7042 1008 PKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELL 1087 (2245)
Q Consensus 1008 ~~~~~~~~~~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 1087 (2245)
+.+... .+++.|+|++|.. ++.+|.|+|+..+...........+......
T Consensus 407 l~~~~~-~~si~l~W~~p~~----~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~------------------------- 456 (589)
T 3l5h_A 407 LKAFPK-DNMLWVEWTTPRE----SVKKYILEWCVLSDKAPCITDWQQEDGTVHR------------------------- 456 (589)
T ss_dssp CEEEEC-SSSEEEECCCCSS----CCSCBCCEEEEECSSSCCCEEECCBCSSCCE-------------------------
T ss_pred EEEEEC-CCeEEEEEECCCC----CccEEEEEEEECCCCCCCccCcEEeeCCcce-------------------------
Confidence 887765 6899999999874 4899999998765432100000000110000
Q ss_pred hcccccccccccCCcEEEEEEEEEecCCCCCCCCCCcceeecCCCCCCccccCCCceeEEEEcCCeEEEEEEeeecC---
Q psy7042 1088 LMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRP--- 1164 (2245)
Q Consensus 1088 ~~~~~~~i~~L~~~~~Y~~~v~A~n~~G~~~~s~~~~~~~~~~~p~~p~~~~~~~~~~~~v~~~~~~~l~~~~~~~p--- 1164 (2245)
.+.+.+|.+++.|.|+|+|.|..|.|.++. ....+...+|.+| .++.+.......+.+.|...+
T Consensus 457 ----~~~~~~L~p~t~Y~~~V~A~~~~g~g~~~~-~~~~t~~~~P~~p--------p~l~~~~~~~~sv~l~W~~~~~~~ 523 (589)
T 3l5h_A 457 ----TYLRGNLAESKCYLITVTPVYADGPGSPES-IKAYLKQAPPSKG--------PTVRTKKVGKNEAVLEWDQLPVDV 523 (589)
T ss_dssp ----EECCSCCCSSSEEEEEECBEETTEECCCEE-EEEESSCCCCSSC--------CCCCEECCCSSCBEEBCCCCCHHH
T ss_pred ----EEehhccccCcEEEEEEEEEeCCcccCCEE-EEEEeccCCCCCC--------CeEEEeecccceEEEEecCCCHHH
Confidence 114799999999999999999999887642 2233333334333 223444455556788886543
Q ss_pred --CCcceEEeCCeecCCCCcEEEEEccceEEEEecCccccccceeE--EEEEEcCCcceeEEEEEEEEC
Q psy7042 1165 --KPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATDSGSY--TIQLVNTVGSDSASCKVYVVD 1229 (2245)
Q Consensus 1165 --~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y--~~~a~n~~g~~~~s~~~~v~~ 1229 (2245)
.....+......... .............+.+..+ .+...| +|.|.|..| ++.+..+.+.+
T Consensus 524 ~~g~i~~Y~v~~~~~~~-~~~~~~~~~~~~~~~~~~L---~p~t~Y~~~V~A~n~~G-~~~S~~~~~~T 587 (589)
T 3l5h_A 524 QNGFIRNYTIFYRTIIG-NETAVNVDSSHTEYTLSSL---TSDTLYMVRMAAYTDEG-GKDGPEFTFTT 587 (589)
T ss_dssp HCSCEEEEEECCBCSSC-CCCCEEECTTCCBCCBCSC---CSSCCEECCEEEEETTE-EEECCCCEECC
T ss_pred cCccceeEEEEEEeCCC-CeEEEEeCCcccEEEecCC---CCCCEEEEEEEEEeCCC-CCCCCCeEEec
Confidence 221122222211111 1111222233444555444 666666 678899999 77776666544
No 47
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.97 E-value=8.4e-29 Score=300.43 Aligned_cols=281 Identities=23% Similarity=0.387 Sum_probs=211.5
Q ss_pred CCCCceeccCCceEEcCCCeEEEEEEecCcCCCeEEEeeCCEeccCCceEEEE--ecCcEEEEEEeeecc-CCCeEEEEE
Q psy7042 1695 GEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVE--TAGGVFRLHFNEVTD-VDNGDYTCE 1771 (2245)
Q Consensus 1695 ~~~p~~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~~~~l~~~~~~~~~--~~~~~~~L~i~~v~~-~d~G~Y~C~ 1771 (2245)
..+|.|...+.++.+.+|++++|.|.+.|.|.+.+.|+++|..+... ++.+. ..+....|.|.+++. +|+|.|+|.
T Consensus 4 ~~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~g~~i~~~-~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~ 82 (304)
T 2yd9_A 4 EEPPRFIKEPKDQIGVSGGVASFVCQATGDPKPRVTWNKKGKKVNSQ-RFETIEFDESAGAVLRIQPLRTPRDENVYECV 82 (304)
T ss_dssp CCCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEC-------CT-TEEEEEETTTTEEEEEECSCCTTTTCSEEEEE
T ss_pred ccCCeeeecCCceEecCCCeEEEEEEEEEeCCCeEEEEECCEECCCC-ceEEEEecCCCceEEEEecccccCCCeEEEEE
Confidence 46889999999999999999999999999999999999999988544 33332 234457899999998 999999999
Q ss_pred EecCceeeEEEEEEEecCC-------CccccCCCceEEcCCCeEEEEEEEeccCCcEEEEEECCEEeecCCc-eEEEEcC
Q psy7042 1772 AYNSVGFAHTSSRVKIGTP-------PRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDR-FKFTVLD 1843 (2245)
Q Consensus 1772 ~~n~~g~~~~~~~l~V~~~-------p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~v~W~~~g~~l~~~~~-~~~~~~~ 1843 (2245)
+.|..|.....+.|.|..+ |.+...+....+.+|+.+.|.|.+.|.|.+.+.|+++|..+..... ..+....
T Consensus 83 a~n~~g~~~~~~~l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~ 162 (304)
T 2yd9_A 83 AQNSVGEITVHAKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQLR 162 (304)
T ss_dssp EECSSCEECCEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEECCEEECSSCCEEEEEETTEECCGGGGTTSEEECT
T ss_pred EECCCCeEEEEEEEEEeccccCCCCCCeeecCCccEEEeCCCeEEEEEECccCCCCeEEEEECCEECcCCCCcceEEeCC
Confidence 9999999888899999765 6677777788899999999999999999999999999998865421 1222222
Q ss_pred CeEEEEEcccCcccceEEEEEEEcCCeeeEEE-EEEEEeCCCCCCCCCceecccccceEEEEecCCCCCCCeeeeEEEEE
Q psy7042 1844 DYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGT-FTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVE 1922 (2245)
Q Consensus 1844 ~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~-~~l~v~~~p~~~~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~ 1922 (2245)
+ ..|.|.++..+|+|.|+|.|.|..|..... ..+.|...
T Consensus 163 ~-~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~--------------------------------------- 202 (304)
T 2yd9_A 163 S-GALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQ--------------------------------------- 202 (304)
T ss_dssp T-SCEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECC---------------------------------------
T ss_pred C-eEEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEee---------------------------------------
Confidence 2 379999999999999999999988754322 22222100
Q ss_pred EEcCCCCceEEEeeecCcceEEecCCCCCCeEEEEEEEECCCCCCCCCCCcCceeccCCCCCCCCCCCcEEEEEcCCeEE
Q psy7042 1923 RRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVN 2002 (2245)
Q Consensus 1923 ~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~~~a~n~~g~~~~s~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~v~ 2002 (2245)
T Consensus 203 -------------------------------------------------------------------------------- 202 (304)
T 2yd9_A 203 -------------------------------------------------------------------------------- 202 (304)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEeccCCCCCCceeEEEEEEeeecCccceEEEEEEeccceEEeCCCcCCceEEEEEEEEeccccCCCcCCCCcccccCc
Q psy7042 2003 LSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDP 2082 (2245)
Q Consensus 2003 l~W~~p~~~~~~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~s~~v~~~~~ 2082 (2245)
T Consensus 203 -------------------------------------------------------------------------------- 202 (304)
T 2yd9_A 203 -------------------------------------------------------------------------------- 202 (304)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCceEEeeccceeeecCccEEEEEEEEeeCCCeEEEeeCCEeeCCCCcEEEEEeCcEEEEEEcCCCCCCCeEEEEEE
Q psy7042 2083 MAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRA 2162 (2245)
Q Consensus 2083 ~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 2162 (2245)
..+|.+...+.+..+.+|+.++|.|.+.|.|.|.|.|+|+|..+....++. .....|.|.++ +|+|.|+|.|
T Consensus 203 --~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~----~~~~~L~i~~~--~d~G~Y~C~a 274 (304)
T 2yd9_A 203 --NVAPRFSILPMSHEIMPGGNVNITCVAVGSPMPYVKWMQGAEDLTPEDDMP----VGRNVLELTDV--KDSANYTCVA 274 (304)
T ss_dssp --CEEEEEEECCCCBCCCTTCCEEEEEEEEEESCCEEEEEETTEECSCSSSCC----BSEEEEEECSC--CSCEEEEEEE
T ss_pred --ccCCcEEecCCceEEcCCCeEEEEEEEeeeCCCEEEEEECCEECCCccccc----CCcEEEEEccc--ccCEEEEEEE
Confidence 012444444445567899999999999999999999999999998765421 23446888776 5999999999
Q ss_pred EeCCceeeEEEEEEEEcCCCCC
Q psy7042 2163 VNKGGVKSTKAELIIMTAPKFN 2184 (2245)
Q Consensus 2163 ~N~~G~~~~~~~l~V~~~p~~~ 2184 (2245)
.|.+|..+.++.|.|..++.+.
T Consensus 275 ~N~~G~~~~~~~l~V~~~~~~~ 296 (304)
T 2yd9_A 275 MSSLGVIEAVAQITVKSLPKAG 296 (304)
T ss_dssp EETTEEEEEEEEEC--------
T ss_pred EeCCCcEEEEEEEEEecCcccc
Confidence 9999999999999998776654
No 48
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.96 E-value=8.1e-30 Score=318.01 Aligned_cols=160 Identities=13% Similarity=0.142 Sum_probs=126.2
Q ss_pred EEcCCCeEEEEEEecCcCCCeEEEeeCCEeccCCceEEEEecCcEEEEEEeeeccCCCeEEEEEEecCceeeEEEEEEEe
Q psy7042 1708 VVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 1787 (2245)
Q Consensus 1708 ~~~~G~~v~L~C~~~~~p~~~v~W~~~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~l~V 1787 (2245)
.+.+|++++|.|.+.+.|.+.+.|++++..+. ... ..|.|.+++.+|+|.|+|.|.|..+.....+.|.|
T Consensus 107 ~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~--------~~~--~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v 176 (363)
T 1wio_A 107 HLLQGQSLTLTLESPPGSSPSVQCRSPRGKNI--------QGG--KTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVV 176 (363)
T ss_dssp SEESBSCEEEEEECCTTCCCCEEEECSSSCEE--------EES--SEEEECSBCGGGCEECEEEEEETTEEEEECCEECE
T ss_pred EEecCCCEEEEEEcCCCCCCeEEEEcCCCccc--------ccc--eEEEEeeCChhcCCEEEEEEecCCCeEEEEEEEEE
Confidence 35789999999999999999999999876541 112 24999999999999999999998877777778888
Q ss_pred cCCCccccCCCceEEcCCCeEEEEEEEec-----cCCcEEEEEECCEEeec--------CCceEEEE----------cCC
Q psy7042 1788 GTPPRIDRMPNALYIPEGDNTKVKIFYAG-----DQPMEVSLTKNGRVVQS--------DDRFKFTV----------LDD 1844 (2245)
Q Consensus 1788 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-----~p~~~v~W~~~g~~l~~--------~~~~~~~~----------~~~ 1844 (2245)
..+|... ....+.+|+.+.|.|.+.+ .|.+.+.|+++|..+.. ..++.+.. .+.
T Consensus 177 ~~~p~~~---~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (363)
T 1wio_A 177 LAFQKAS---SIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKL 253 (363)
T ss_dssp ECCSCSE---EEEEEETBCCEEEECCCCCCCCSSCEEEEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSS
T ss_pred ecCCCCC---CceEEecCCEEEEEEEEecccccCCCceeEEEecCCCCccceEEEEEecCCeeeccccccchhhhcccCC
Confidence 7666532 5667889999999998877 78899999999987755 44444332 222
Q ss_pred eEEEEEcccCcccceEEEEEEEcC--CeeeEEEEEEEE
Q psy7042 1845 YIIIFIKEIRKEDAGDYTVNLSNS--SGSVSGTFTINI 1880 (2245)
Q Consensus 1845 ~~~l~i~~~~~~d~G~Y~C~a~n~--~g~~~~~~~l~v 1880 (2245)
...|.|.++..+|+|.|+|.|.|. .|..+..+.|.|
T Consensus 254 ~~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~~~~l~V 291 (363)
T 1wio_A 254 PLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVV 291 (363)
T ss_dssp SCEEEESSBCGGGCEEEEEEECBTTTTCCEEEEEEEEE
T ss_pred ceEEEEccCCcCcCcEEEEEEEEhhhcCeEEEEEeEEE
Confidence 448999999999999999999998 776655554443
No 49
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.96 E-value=1e-28 Score=298.24 Aligned_cols=279 Identities=22% Similarity=0.353 Sum_probs=223.4
Q ss_pred CCCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEE-CCeeccCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEEc
Q psy7042 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLR-NGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYN 167 (2245)
Q Consensus 89 ~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~-~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 167 (2245)
.+|.|+.++.++.+.+|+.++|.|.+.|.|. .|.|+| +|..+....++.+..++....|.|.+++.+|+|.|+|.|.|
T Consensus 3 ~~p~v~~~~~~~~v~~G~~v~l~C~~~~~p~-~v~W~~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n 81 (291)
T 2wim_A 3 ALLQVTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATD 81 (291)
T ss_dssp CCCEEEESCSEEEEETTCCEEEEEEEESCCS-EEECBCTTCCBCCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred CCceEEEeccceEecCCCcEEEEEEEeCCCC-ceEEECCCCcCccCCCcEEEecCCCEEEEEEccCCcccCEEEEEEEec
Confidence 4789999999999999999999999999875 899999 88888888899888888788899999999999999999999
Q ss_pred Ccccce-eEEEEEecCCCeeecCCCceEEcCCCeEEEEEEEecCCCceEEEeeCceeeecCCceEEEEeCCeEEEEEccc
Q psy7042 168 SVGFAH-TSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEI 246 (2245)
Q Consensus 168 ~~g~~~-~~~~l~V~~~P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~ 246 (2245)
..|... ..+.|.|..+|.+...+....+.+|+.+.|.|.+.|.|.+.+.|++++..+............ ...|.|.++
T Consensus 82 ~~g~~~~~~~~l~v~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~-~~~L~i~~v 160 (291)
T 2wim_A 82 AKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLA-NNNLQILNI 160 (291)
T ss_dssp SSSCEEEEEEEEEEECCCBCCSCCCSEEEETTSCEEECCCCBCSSCCEEEEECC----CBCCCSSEEECT-TSCEEETTC
T ss_pred ccCceEEEEEEEEecCCcceEeCCCChhhcCCCCEEEEEEEccCCCCEEEEEECCccccccCCceEEEcc-CCCEEEEec
Confidence 988764 477899999999988889999999999999999999999999999999888653222222221 226999999
Q ss_pred CccCceeEEEEEEcCCcceE--EEEEEEEecCCCCCCCCcccceeeccceEEEecCCCCCCCceeEEEEEEEEecCCCce
Q psy7042 247 RKEDAGDYTVNLSNSSGSVS--GTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHW 324 (2245)
Q Consensus 247 ~~~d~G~Y~C~a~n~~g~~~--~~~~l~V~~~p~~~~~~~~~~~~~~~s~~~~w~pp~~~~~~~~~~~~~~~~~~~~~~~ 324 (2245)
..+|+|.|+|.|.|..+... ..+.|.|..+|.
T Consensus 161 ~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~~p~---------------------------------------------- 194 (291)
T 2wim_A 161 NKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPA---------------------------------------------- 194 (291)
T ss_dssp CGGGCEEEEEEEEETTTTEEEEEEEEEEEEBCCC----------------------------------------------
T ss_pred chhhCEEEEEEEEECCCCeeEEeeEEEEeccCCc----------------------------------------------
Confidence 99999999999998875432 333344333221
Q ss_pred EEeeeccCcceEEEcCCCCCCEEEEEEEEEecCCCCCCCCCCCceecCCCCCCCCCCCCcEEEeecCCeeEEEecCCCCC
Q psy7042 325 ICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDD 404 (2245)
Q Consensus 325 ~~~~~~~~~~~~~i~~l~~~~~~~~~c~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~v~~~~~~~~~l~W~~~~~~ 404 (2245)
T Consensus 195 -------------------------------------------------------------------------------- 194 (291)
T 2wim_A 195 -------------------------------------------------------------------------------- 194 (291)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCccEEEEEeeecCCCCcEEEeeeecCCceeecCCcccCceEEEEEEeecCCCCCCCCCCCCcEEecCCcccCCCcee
Q psy7042 405 GGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEII 484 (2245)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~s~~~~~v~~~~~~~~~~p~~~ 484 (2245)
+.
T Consensus 195 ------------------------------------------------------------------------------~~ 196 (291)
T 2wim_A 195 ------------------------------------------------------------------------------IS 196 (291)
T ss_dssp ------------------------------------------------------------------------------CB
T ss_pred ------------------------------------------------------------------------------cc
Confidence 00
Q ss_pred cc--ccccccccccceeeEEEEeccCcCeEEEEeCCeecCCCccEEEEeeCCeEEEEEecccccCCceEEEEEEeCCCCC
Q psy7042 485 VP--LRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVK 562 (2245)
Q Consensus 485 ~~--~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~ 562 (2245)
.. ..+..+.+|+.+.|.|.+.|.|.+.+.|++++..+..+.++.+...+ ..|.|.++..+|+|.|+|.|.|..|..
T Consensus 197 ~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~--~~L~i~~~~~~d~G~Y~C~a~N~~G~~ 274 (291)
T 2wim_A 197 MPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSN--TELTVRNIINSDGGPYVCRATNKAGED 274 (291)
T ss_dssp CSCSEEECCSSSCCEEEEECBCCCBSCCEEEEEETTEECCCTTTEEECSTT--CEEEEESCCSTTCEEEEEEEEETTEEE
T ss_pred cCcccccceecCCCeEEEEEEeecCCCCeEEEEECCEECcCCccEEEcCCc--cEEEEeeCCcccCEEEEEEEEECCCce
Confidence 00 01234568999999999999999999999999999888777664433 389999999999999999999999999
Q ss_pred CcceeEeEecCCC
Q psy7042 563 STKAELIIMTAPK 575 (2245)
Q Consensus 563 ~~~~~l~v~~~p~ 575 (2245)
..++.|.|..++.
T Consensus 275 ~~~~~l~v~~~~~ 287 (291)
T 2wim_A 275 EKQAFLQVFVQHH 287 (291)
T ss_dssp EEEEEEEC-----
T ss_pred eeeEEEEEEEecc
Confidence 9999999987653
No 50
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.96 E-value=1.7e-29 Score=309.83 Aligned_cols=297 Identities=18% Similarity=0.268 Sum_probs=233.7
Q ss_pred CCCceecCCcceEEeCCCeEEEEEEEeee-cCCceEEEECCeeccCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEEc
Q psy7042 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGT-PVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYN 167 (2245)
Q Consensus 89 ~~P~~~~~~~~~~v~~G~~v~L~C~~~g~-p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 167 (2245)
.+|.|..++ +..+.+|+.++|.|.+.+. |.+.|.|+|+|..+..+.++.+. .+...|.|.+++.+|+|.|+|.|.|
T Consensus 6 ~~P~~~~~~-~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~~~n 82 (317)
T 2y25_A 6 TGPHFVEYL-SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFK--DGICTLLITEFSKKDAGIYEVILKD 82 (317)
T ss_dssp SCCEEEEEE-EEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCSCC-------CCEEEEETTCCSTTCSCEEEEEES
T ss_pred CCCcEeeee-eEEECCCCeEEEEEEEcCCCCCCEEEEEECCeEcCCCCcEEEE--CCeEEEEEccCCcccCeEEEEEEEC
Confidence 588998665 5899999999999999887 78899999999999987777665 3335799999999999999999999
Q ss_pred CcccceeEEEEEecCCCeeecCCCceEEcCCCeEEEEEEEec----------CCCceEEEeeCceeeecCCceEEEEeCC
Q psy7042 168 SVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAG----------DQPMEVSLTKNGRVVQSDDRFKFTVLDD 237 (2245)
Q Consensus 168 ~~g~~~~~~~l~V~~~P~~~~~~~~~~v~~G~~~~l~C~~~g----------~p~~~i~W~~~g~~l~~~~~~~~~~~~~ 237 (2245)
..|....++.|.|..+|.+...+....+.+|+.+.|.|.+.+ .|.+.+.|+|+|..+....++.+...+.
T Consensus 83 ~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~ 162 (317)
T 2y25_A 83 DRGKDKSRLKLVDEAFKELMMEVCKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGE 162 (317)
T ss_dssp SSCEEEEEECCSTHHHHHHHHHHHHHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCCCCSSEEEEECSS
T ss_pred CCCcEEEEEEEEEecCccccccCCceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEECCCCCCeEEeccCC
Confidence 999888888888877766655555566778888888887766 7899999999999998888888888788
Q ss_pred eEEEEEcccCccCceeEEEEEEcCCcceEEEEEEEEecCCCCCCCCcccceeeccceEEEecCCCCCCCceeEEEEEEEE
Q psy7042 238 YIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERR 317 (2245)
Q Consensus 238 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~s~~~~w~pp~~~~~~~~~~~~~~~~ 317 (2245)
...|.|.++..+|+|.|+|.|.|..|....++.|.|...+.... .+..+
T Consensus 163 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~---~~~~~---------------------------- 211 (317)
T 2y25_A 163 QIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYA---EFQRL---------------------------- 211 (317)
T ss_dssp EEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHH---HHHHH----------------------------
T ss_pred EEEEEECcCCcccCeeEEEEEEeCCceEEEEEEEeeeeccccch---hhccc----------------------------
Confidence 88899999999999999999999988887777766542110000 00000
Q ss_pred ecCCCceEEeeeccCcceEEEcCCCCCCEEEEEEEEEecCCCCCCCCCCCceecCCCCCCCCCCCCcEEEeecCCeeEEE
Q psy7042 318 DISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLS 397 (2245)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~c~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~v~~~~~~~~~l~ 397 (2245)
T Consensus 212 -------------------------------------------------------------------------------- 211 (317)
T 2y25_A 212 -------------------------------------------------------------------------------- 211 (317)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ecCCCCCCCCCccEEEEEeeecCCCCcEEEeeeecCCceeecCCcccCceEEEEEEeecCCCCCCCCCCCCcEEecCCcc
Q psy7042 398 WDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMA 477 (2245)
Q Consensus 398 W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~s~~~~~v~~~~~~~ 477 (2245)
... . ...
T Consensus 212 ----------------------------------------~~~----------------------------~-----~~~ 218 (317)
T 2y25_A 212 ----------------------------------------KQA----------------------------A-----IAE 218 (317)
T ss_dssp ----------------------------------------HHH----------------------------H-----HHT
T ss_pred ----------------------------------------CCc----------------------------c-----cCc
Confidence 000 0 000
Q ss_pred cCCCceec-cccccccccccceeeEEEEeccCcCeEEEEeCCeecCCCccEEEEee-CCeEEEEEecccccCCceEEEEE
Q psy7042 478 AKAPEIIV-PLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAE-GDTYTLIINSVYGVDADEYVCRA 555 (2245)
Q Consensus 478 ~~~p~~~~-~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~a 555 (2245)
..+|.+.. .+....+.+|+.+.|.|.+.|.|.+.+.|++++..+..+.++.+... +....|.|.++..+|+|.|+|.|
T Consensus 219 ~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 298 (317)
T 2y25_A 219 KNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVV 298 (317)
T ss_dssp TTSCEEEEBCCSEEEEETTSBBCEEEEEECSSCCEEEEEESSSEECCCSSEEECCBTTTEEEEEEBSCCSTTCEEEEEEE
T ss_pred CCCCcccccCCccEEEEcCCEEEEEEEEecCCCCEEEEEECCEeCCCCCcEEEEEcCCCEEEEEECCCCHHHCEEEEEEE
Confidence 01122222 23456778999999999999999999999999999998888888766 77789999999999999999999
Q ss_pred EeCCCCCCcceeEeEec
Q psy7042 556 VNKGGVKSTKAELIIMT 572 (2245)
Q Consensus 556 ~n~~g~~~~~~~l~v~~ 572 (2245)
.|..|....++.|.|..
T Consensus 299 ~N~~g~~~~~~~l~V~~ 315 (317)
T 2y25_A 299 KNKYGSETSDFTVSVFI 315 (317)
T ss_dssp EETTEEEEEEEEEEEEC
T ss_pred EeCCCeEEEEEEEEEEc
Confidence 99999998889998874
No 51
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.96 E-value=3.7e-28 Score=293.35 Aligned_cols=276 Identities=22% Similarity=0.330 Sum_probs=219.3
Q ss_pred CCceecCCcceEEeCCCeEEEEEEEeeec-CCceEEEE-CCeeccC-CCeEEEEE-cCcEEEEEEeeeccCCCeEEEEEE
Q psy7042 90 KPDFIVPLKDLVVPLGKLLTLQCEATGTP-VPKCRWLR-NGREISS-GARYRVET-AGGVFRLHFNEVTDVDNGDYTCEA 165 (2245)
Q Consensus 90 ~P~~~~~~~~~~v~~G~~v~L~C~~~g~p-~~~i~W~~-~g~~l~~-~~~~~~~~-~~~~~~L~i~~~~~~d~G~Y~C~a 165 (2245)
+|.|...|.+..+.+|+.++|.|.+.+.| .+.|.|+| +|..+.. ..++.+.. .+....|.|.+++.+|+|.|+|.|
T Consensus 2 ~~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~ 81 (291)
T 1qz1_A 2 VLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVV 81 (291)
T ss_dssp CCCEEEESSSEEEETTCCEEEEEEESSCCSCCEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred CcceEecCCCceEeCCCeEEEEEEeCCCCCCcEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEEEEE
Confidence 67888999999999999999999999876 68999999 8888774 34555543 345668999999999999999999
Q ss_pred EcCccc-ceeEEEEEecCCCeeecCCCceEEcCCCeEEEEEEEecCCCceEEEeeCceeeecCCceEEEEeCCeEEEEEc
Q psy7042 166 YNSVGF-AHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIK 244 (2245)
Q Consensus 166 ~n~~g~-~~~~~~l~V~~~P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~ 244 (2245)
.|..|. .+..+.|.|..+|.+...|....+.+|+.+.|.|.+.|.|.+.+.|+|+|..+.......+.... ...|.|.
T Consensus 82 ~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~-~~~L~i~ 160 (291)
T 1qz1_A 82 TAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLS-NNYLQIR 160 (291)
T ss_dssp ECTTSCEEEEEEEEEEECCSEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEETTSCSSTTCCTTEEECT-TSCEEET
T ss_pred EcCCCCeeEEEEEEEeeccccccCCCCcccccCCCeEEEEEEeccCCCCEEEEEECCEEcccCCCceEEEcc-CCcEEEc
Confidence 999864 45578899999999999999999999999999999999999999999999988654333322222 2369999
Q ss_pred ccCccCceeEEEEEEcCCcceE--EEEEEEEecCCCCCCCCcccceeeccceEEEecCCCCCCCceeEEEEEEEEecCCC
Q psy7042 245 EIRKEDAGDYTVNLSNSSGSVS--GTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMP 322 (2245)
Q Consensus 245 ~~~~~d~G~Y~C~a~n~~g~~~--~~~~l~V~~~p~~~~~~~~~~~~~~~s~~~~w~pp~~~~~~~~~~~~~~~~~~~~~ 322 (2245)
++..+|+|.|+|.|.|..+... ..+.|.|..+|
T Consensus 161 ~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~~p--------------------------------------------- 195 (291)
T 1qz1_A 161 GIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPP--------------------------------------------- 195 (291)
T ss_dssp TCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEEEEE---------------------------------------------
T ss_pred cCccccCeEEEEEEEecCCCceeeEEEEEEEecCC---------------------------------------------
Confidence 9999999999999998764432 23333332211
Q ss_pred ceEEeeeccCcceEEEcCCCCCCEEEEEEEEEecCCCCCCCCCCCceecCCCCCCCCCCCCcEEEeecCCeeEEEecCCC
Q psy7042 323 HWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPL 402 (2245)
Q Consensus 323 ~~~~~~~~~~~~~~~i~~l~~~~~~~~~c~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~v~~~~~~~~~l~W~~~~ 402 (2245)
T Consensus 196 -------------------------------------------------------------------------------- 195 (291)
T 1qz1_A 196 -------------------------------------------------------------------------------- 195 (291)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCccEEEEEeeecCCCCcEEEeeeecCCceeecCCcccCceEEEEEEeecCCCCCCCCCCCCcEEecCCcccCCCc
Q psy7042 403 DDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPE 482 (2245)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~s~~~~~v~~~~~~~~~~p~ 482 (2245)
.
T Consensus 196 -------------------------------------------------------------------------------~ 196 (291)
T 1qz1_A 196 -------------------------------------------------------------------------------T 196 (291)
T ss_dssp -------------------------------------------------------------------------------E
T ss_pred -------------------------------------------------------------------------------c
Confidence 0
Q ss_pred eec--cccccccccccceeeEEEEeccCcCeEEEEeCCeecCCCc----cEEEEeeCCeEEEEEecccccCCceEEEEEE
Q psy7042 483 IIV--PLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSA----RHHIFAEGDTYTLIINSVYGVDADEYVCRAV 556 (2245)
Q Consensus 483 ~~~--~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~----~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 556 (2245)
+.. .+.+..+.+|+.+.|.|.+.|.|.+.+.|++++..+.... ++.+.. ....|.|.++..+|+|.|+|.|.
T Consensus 197 ~~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~--~~~~L~i~~v~~~d~G~Y~C~a~ 274 (291)
T 1qz1_A 197 VQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEEEDDEKHIFSD--DSSELTIRNVDKNDEAEYVCIAE 274 (291)
T ss_dssp EEESCSEEEEETTSCCCEEEEEEEEEESCCEEEEEETTEECCCC--CCSSEEECT--TSCEEEECSCCGGGCEEEEEEEE
T ss_pred ccccccccccccccCceEEEEEEEEEeCCCcEEEEECCEECcCCCCCCcceEEcC--CCcEEEEEecChhcCEEEEEEEE
Confidence 000 0113456789999999999999999999999999987664 444333 33489999999999999999999
Q ss_pred eCCCCCCcceeEeEec
Q psy7042 557 NKGGVKSTKAELIIMT 572 (2245)
Q Consensus 557 n~~g~~~~~~~l~v~~ 572 (2245)
|..|..+.++.|.|..
T Consensus 275 N~~G~~~~~~~l~V~~ 290 (291)
T 1qz1_A 275 NKAGEQDASIHLKVFA 290 (291)
T ss_dssp ETTEEEEEEEEEEEEC
T ss_pred eCCCceEEEEEEEEEc
Confidence 9999998888888864
No 52
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.96 E-value=1.9e-28 Score=315.87 Aligned_cols=216 Identities=12% Similarity=0.122 Sum_probs=157.7
Q ss_pred eceEEECCCccCCcEEEEEEEEcCCCCCCCCCccccEEEeeccCCCCCceecCCcceEEeCCCeEEEEEEEee-ecCC-c
Q psy7042 44 ECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATG-TPVP-K 121 (2245)
Q Consensus 44 ~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~~~v~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~~g-~p~~-~ 121 (2245)
..+|.|.+++.+|+|.|+|.|.|..|..... ...+.+.....+|.+...+....+.+|+.++|.|.+.| .|.+ .
T Consensus 74 ~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~----~~~l~V~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~ 149 (438)
T 1qgc_4 74 DFTLTIDPVEADDVATYYCQQSNEVPLTFGA----GTKLDLKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDIN 149 (438)
T ss_dssp EEEEEESSCCGGGCEEEEEEECSSTTCCBCC----CEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEE
T ss_pred cEEEEeCCCcCcCCeeEEEEEecCCCccccC----ceeEEecCCCCCCEEEecCCChhhccCCceEEEEEEccccCCCcE
Confidence 4689999999999999999999987643221 12233333334787776443333456889999999987 6777 8
Q ss_pred eEEEECCeeccCCCeEEE--EE-cCc----EEEEEEeeeccCCCeEEEEEEEcCcccceeEEEEEecCCCeeecCCCceE
Q psy7042 122 CRWLRNGREISSGARYRV--ET-AGG----VFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALY 194 (2245)
Q Consensus 122 i~W~~~g~~l~~~~~~~~--~~-~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~P~~~~~~~~~~ 194 (2245)
|.|+|||..+..+..... .. .++ ...|.|.+++.+|+|.|+|.|.|..+.......+.+..++.....|....
T Consensus 150 v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (438)
T 1qgc_4 150 VKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNECEVMLVESGGGL 229 (438)
T ss_dssp EEEEETTEEECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSCEEEEEETTC-CCEEEEECCEE
T ss_pred EEEEECCEEcCCCceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCCceecccccccceeEEecCCceE
Confidence 999999999876522111 11 111 23699999999999999999999988765555555444444444567788
Q ss_pred EcCCCeEEEEEEEecCC--CceEEEeeC--ceeee-----------------cCCceEEEEe--CCeEEEEEcccCccCc
Q psy7042 195 IPEGDNTKVKIFYAGDQ--PMEVSLTKN--GRVVQ-----------------SDDRFKFTVL--DDYIIIFIKEIRKEDA 251 (2245)
Q Consensus 195 v~~G~~~~l~C~~~g~p--~~~i~W~~~--g~~l~-----------------~~~~~~~~~~--~~~~~L~i~~~~~~d~ 251 (2245)
+.+|+.++|.|.+.|.| .+.+.|||+ |..+. ...++.+... .....|.|.++..+|+
T Consensus 230 v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~ 309 (438)
T 1qgc_4 230 VKPGGSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSADT 309 (438)
T ss_dssp ECTTCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEEECSCCGGGC
T ss_pred EecCCcEEEEEEEcccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEEECCCChhhC
Confidence 99999999999999988 679999997 55432 1345555543 3456899999999999
Q ss_pred eeEEEEEEcCCc
Q psy7042 252 GDYTVNLSNSSG 263 (2245)
Q Consensus 252 G~Y~C~a~n~~g 263 (2245)
|.|+|.|.|..+
T Consensus 310 G~Y~C~a~n~~~ 321 (438)
T 1qgc_4 310 AMYYCVRREDGG 321 (438)
T ss_dssp CEEEEEECCSSS
T ss_pred EEEEEEEEccCC
Confidence 999999998543
No 53
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.96 E-value=4.2e-28 Score=292.88 Aligned_cols=280 Identities=22% Similarity=0.354 Sum_probs=219.8
Q ss_pred CCCceeccCCceEEcCCCeEEEEEEecCcCCCeEEEee-CCEeccCCceEEEEecCcEEEEEEeeeccCCCeEEEEEEec
Q psy7042 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLR-NGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYN 1774 (2245)
Q Consensus 1696 ~~p~~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~-~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n 1774 (2245)
.+|.+...+.++.+.+|++++|.|.+.+.|. .+.|++ +|..+....++.+..++....|.|.+++.+|+|.|+|.+.|
T Consensus 3 ~~p~v~~~~~~~~v~~G~~v~l~C~~~~~p~-~v~W~~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n 81 (291)
T 2wim_A 3 ALLQVTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATD 81 (291)
T ss_dssp CCCEEEESCSEEEEETTCCEEEEEEEESCCS-EEECBCTTCCBCCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred CCceEEEeccceEecCCCcEEEEEEEeCCCC-ceEEECCCCcCccCCCcEEEecCCCEEEEEEccCCcccCEEEEEEEec
Confidence 4788888889999999999999999998875 899999 78888777888888888788899999999999999999999
Q ss_pred Cceee-EEEEEEEecCCCccccCCCceEEcCCCeEEEEEEEeccCCcEEEEEECCEEeecCCceEEEEcCCeEEEEEccc
Q psy7042 1775 SVGFA-HTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEI 1853 (2245)
Q Consensus 1775 ~~g~~-~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~l~i~~~ 1853 (2245)
..|.. ...+.|.|..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+............+ ..|.|.++
T Consensus 82 ~~g~~~~~~~~l~v~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~-~~L~i~~v 160 (291)
T 2wim_A 82 AKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLAN-NNLQILNI 160 (291)
T ss_dssp SSSCEEEEEEEEEEECCCBCCSCCCSEEEETTSCEEECCCCBCSSCCEEEEECC----CBCCCSSEEECTT-SCEEETTC
T ss_pred ccCceEEEEEEEEecCCcceEeCCCChhhcCCCCEEEEEEEccCCCCEEEEEECCccccccCCceEEEccC-CCEEEEec
Confidence 88876 45678899999998888888899999999999999999999999999998876432222222222 36999999
Q ss_pred CcccceEEEEEEEcCCeeeE--EEEEEEEeCCCCCCCCCceecccccceEEEEecCCCCCCCeeeeEEEEEEEcCCCCce
Q psy7042 1854 RKEDAGDYTVNLSNSSGSVS--GTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHW 1931 (2245)
Q Consensus 1854 ~~~d~G~Y~C~a~n~~g~~~--~~~~l~v~~~p~~~~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~ 1931 (2245)
..+|+|.|+|.|.|..+... ..+.+.+..+|
T Consensus 161 ~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~~p----------------------------------------------- 193 (291)
T 2wim_A 161 NKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPP----------------------------------------------- 193 (291)
T ss_dssp CGGGCEEEEEEEEETTTTEEEEEEEEEEEEBCC-----------------------------------------------
T ss_pred chhhCEEEEEEEEECCCCeeEEeeEEEEeccCC-----------------------------------------------
Confidence 99999999999998764332 22222222111
Q ss_pred EEEeeecCcceEEecCCCCCCeEEEEEEEECCCCCCCCCCCcCceeccCCCCCCCCCCCcEEEEEcCCeEEEEEeccCCC
Q psy7042 1932 ICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDD 2011 (2245)
Q Consensus 1932 ~~~~~~~~~~~~~i~~l~~~~~y~~~~~a~n~~g~~~~s~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~ 2011 (2245)
T Consensus 194 -------------------------------------------------------------------------------- 193 (291)
T 2wim_A 194 -------------------------------------------------------------------------------- 193 (291)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCceeEEEEEEeeecCccceEEEEEEeccceEEeCCCcCCceEEEEEEEEeccccCCCcCCCCcccccCcccCCCceEE
Q psy7042 2012 GGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEII 2091 (2245)
Q Consensus 2012 ~~~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~s~~v~~~~~~~~~~p~~~ 2091 (2245)
.+.
T Consensus 194 -----------------------------------------------------------------------------~~~ 196 (291)
T 2wim_A 194 -----------------------------------------------------------------------------AIS 196 (291)
T ss_dssp -----------------------------------------------------------------------------CCB
T ss_pred -----------------------------------------------------------------------------ccc
Confidence 000
Q ss_pred ee--ccceeeecCccEEEEEEEEeeCCCeEEEeeCCEeeCCCCcEEEEEeCcEEEEEEcCCCCCCCeEEEEEEEeCCcee
Q psy7042 2092 VP--LRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVK 2169 (2245)
Q Consensus 2092 ~~--~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~ 2169 (2245)
.. .....+.+|+.++|.|.+.|.|.|.|.|+|+|..+..+.++.+..++ ..|.|.++..+|+|.|+|+|.|.+|..
T Consensus 197 ~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~--~~L~i~~~~~~d~G~Y~C~a~N~~G~~ 274 (291)
T 2wim_A 197 MPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSN--TELTVRNIINSDGGPYVCRATNKAGED 274 (291)
T ss_dssp CSCSEEECCSSSCCEEEEECBCCCBSCCEEEEEETTEECCCTTTEEECSTT--CEEEEESCCSTTCEEEEEEEEETTEEE
T ss_pred cCcccccceecCCCeEEEEEEeecCCCCeEEEEECCEECcCCccEEEcCCc--cEEEEeeCCcccCEEEEEEEEECCCce
Confidence 00 01224668999999999999999999999999999988877665443 389999999999999999999999999
Q ss_pred eEEEEEEEEcCCCC
Q psy7042 2170 STKAELIIMTAPKF 2183 (2245)
Q Consensus 2170 ~~~~~l~V~~~p~~ 2183 (2245)
++++.|.|..++.-
T Consensus 275 ~~~~~l~v~~~~~~ 288 (291)
T 2wim_A 275 EKQAFLQVFVQHHH 288 (291)
T ss_dssp EEEEEEEC------
T ss_pred eeeEEEEEEEeccc
Confidence 99999999876643
No 54
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.96 E-value=1.4e-28 Score=301.73 Aligned_cols=298 Identities=18% Similarity=0.265 Sum_probs=232.1
Q ss_pred CCCceeccCCceEEcCCCeEEEEEEecCc-CCCeEEEeeCCEeccCCceEEEEecCcEEEEEEeeeccCCCeEEEEEEec
Q psy7042 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGT-PVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYN 1774 (2245)
Q Consensus 1696 ~~p~~~~~~~~~~~~~G~~v~L~C~~~~~-p~~~v~W~~~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n 1774 (2245)
.+|.|..++ +..+.+|++++|.|.+.+. |.+.+.|+|+|..+....++.+. .+...|.|.+++.+|+|.|+|.+.|
T Consensus 6 ~~P~~~~~~-~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~~~n 82 (317)
T 2y25_A 6 TGPHFVEYL-SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFK--DGICTLLITEFSKKDAGIYEVILKD 82 (317)
T ss_dssp SCCEEEEEE-EEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCSCC-------CCEEEEETTCCSTTCSCEEEEEES
T ss_pred CCCcEeeee-eEEECCCCeEEEEEEEcCCCCCCEEEEEECCeEcCCCCcEEEE--CCeEEEEEccCCcccCeEEEEEEEC
Confidence 577887654 5899999999999999887 77899999999999877776654 3446799999999999999999999
Q ss_pred CceeeEEEEEEEecCCCccccCCCceEEcCCCeEEEEEEEec----------cCCcEEEEEECCEEeecCCceEEEEcCC
Q psy7042 1775 SVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAG----------DQPMEVSLTKNGRVVQSDDRFKFTVLDD 1844 (2245)
Q Consensus 1775 ~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~----------~p~~~v~W~~~g~~l~~~~~~~~~~~~~ 1844 (2245)
..|.......|.|..+|.+...+....+..|+.+.|.|.+.+ .|.+.+.|+++|..+....++.+...+.
T Consensus 83 ~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~ 162 (317)
T 2y25_A 83 DRGKDKSRLKLVDEAFKELMMEVCKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGE 162 (317)
T ss_dssp SSCEEEEEECCSTHHHHHHHHHHHHHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCCCCSSEEEEECSS
T ss_pred CCCcEEEEEEEEEecCccccccCCceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEECCCCCCeEEeccCC
Confidence 999887777777776665544444455667777788887766 6899999999999998888888877778
Q ss_pred eEEEEEcccCcccceEEEEEEEcCCeeeEEEEEEEEeCCCCCCCCCceecccccceEEEEecCCCCCCCeeeeEEEEEEE
Q psy7042 1845 YIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERR 1924 (2245)
Q Consensus 1845 ~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~ 1924 (2245)
...|.|.++..+|+|.|+|.|.|..|.....+.+.+...+.... .+..
T Consensus 163 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~---~~~~----------------------------- 210 (317)
T 2y25_A 163 QIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYA---EFQR----------------------------- 210 (317)
T ss_dssp EEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHH---HHHH-----------------------------
T ss_pred EEEEEECcCCcccCeeEEEEEEeCCceEEEEEEEeeeeccccch---hhcc-----------------------------
Confidence 78899999999999999999999999887777665532100000 0000
Q ss_pred cCCCCceEEEeeecCcceEEecCCCCCCeEEEEEEEECCCCCCCCCCCcCceeccCCCCCCCCCCCcEEEEEcCCeEEEE
Q psy7042 1925 DISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLS 2004 (2245)
Q Consensus 1925 ~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~~~a~n~~g~~~~s~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~v~l~ 2004 (2245)
.
T Consensus 211 -----------------------------------------------------~-------------------------- 211 (317)
T 2y25_A 211 -----------------------------------------------------L-------------------------- 211 (317)
T ss_dssp -----------------------------------------------------H--------------------------
T ss_pred -----------------------------------------------------c--------------------------
Confidence 0
Q ss_pred EeccCCCCCCceeEEEEEEeeecCccceEEEEEEeccceEEeCCCcCCceEEEEEEEEeccccCCCcCCCCcccccCccc
Q psy7042 2005 WDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMA 2084 (2245)
Q Consensus 2005 W~~p~~~~~~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~s~~v~~~~~~~ 2084 (2245)
..+ ....
T Consensus 212 -~~~------------------------------------------------------------------------~~~~ 218 (317)
T 2y25_A 212 -KQA------------------------------------------------------------------------AIAE 218 (317)
T ss_dssp -HHH------------------------------------------------------------------------HHHT
T ss_pred -CCc------------------------------------------------------------------------ccCc
Confidence 000 0000
Q ss_pred CCCceEEe-eccceeeecCccEEEEEEEEeeCCCeEEEeeCCEeeCCCCcEEEEEe-CcEEEEEEcCCCCCCCeEEEEEE
Q psy7042 2085 AKAPEIIV-PLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAE-GDTYTLIINSVYGVDADEYVCRA 2162 (2245)
Q Consensus 2085 ~~~p~~~~-~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~a 2162 (2245)
..+|.+.. .+....+.+|+.++|.|.+.|.|.|.|.|+|+|..+..+.++.+..+ +....|.|.++..+|+|.|+|.|
T Consensus 219 ~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 298 (317)
T 2y25_A 219 KNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVV 298 (317)
T ss_dssp TTSCEEEEBCCSEEEEETTSBBCEEEEEECSSCCEEEEEESSSEECCCSSEEECCBTTTEEEEEEBSCCSTTCEEEEEEE
T ss_pred CCCCcccccCCccEEEEcCCEEEEEEEEecCCCCEEEEEECCEeCCCCCcEEEEEcCCCEEEEEECCCCHHHCEEEEEEE
Confidence 11233333 23456789999999999999999999999999999998888888776 77789999999999999999999
Q ss_pred EeCCceeeEEEEEEEEcC
Q psy7042 2163 VNKGGVKSTKAELIIMTA 2180 (2245)
Q Consensus 2163 ~N~~G~~~~~~~l~V~~~ 2180 (2245)
.|.+|..+.++.|.|..+
T Consensus 299 ~N~~g~~~~~~~l~V~~P 316 (317)
T 2y25_A 299 KNKYGSETSDFTVSVFIP 316 (317)
T ss_dssp EETTEEEEEEEEEEEECC
T ss_pred EeCCCeEEEEEEEEEEcC
Confidence 999999999999999743
No 55
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.96 E-value=2.1e-27 Score=286.80 Aligned_cols=276 Identities=22% Similarity=0.337 Sum_probs=216.5
Q ss_pred CCceeccCCceEEcCCCeEEEEEEecCcC-CCeEEEee-CCEeccC-CceEEEE-ecCcEEEEEEeeeccCCCeEEEEEE
Q psy7042 1697 KPDFIVPLKDLVVPLGKLLTLQCEATGTP-VPKCRWLR-NGREISS-GARYRVE-TAGGVFRLHFNEVTDVDNGDYTCEA 1772 (2245)
Q Consensus 1697 ~p~~~~~~~~~~~~~G~~v~L~C~~~~~p-~~~v~W~~-~~~~l~~-~~~~~~~-~~~~~~~L~i~~v~~~d~G~Y~C~~ 1772 (2245)
+|.+...|.+..+.+|+++.|.|.+.+.+ .+.+.|++ +|..+.. ..++.+. .++....|.|.+++.+|+|.|+|.+
T Consensus 2 ~~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~ 81 (291)
T 1qz1_A 2 VLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVV 81 (291)
T ss_dssp CCCEEEESSSEEEETTCCEEEEEEESSCCSCCEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred CcceEecCCCceEeCCCeEEEEEEeCCCCCCcEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEEEEE
Confidence 56777788889999999999999999876 68999999 7877763 3455543 3456778999999999999999999
Q ss_pred ecCce-eeEEEEEEEecCCCccccCCCceEEcCCCeEEEEEEEeccCCcEEEEEECCEEeecCCceEEEEcCCeEEEEEc
Q psy7042 1773 YNSVG-FAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIK 1851 (2245)
Q Consensus 1773 ~n~~g-~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~l~i~ 1851 (2245)
.|..| .....+.|.|..+|.+...+....+.+|+.+.|.|.+.|.|.+.+.|+++|..+............+ ..|.|.
T Consensus 82 ~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~-~~L~i~ 160 (291)
T 1qz1_A 82 TAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSN-NYLQIR 160 (291)
T ss_dssp ECTTSCEEEEEEEEEEECCSEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEETTSCSSTTCCTTEEECTT-SCEEET
T ss_pred EcCCCCeeEEEEEEEeeccccccCCCCcccccCCCeEEEEEEeccCCCCEEEEEECCEEcccCCCceEEEccC-CcEEEc
Confidence 99885 4556788999999999888888999999999999999999999999999998875443322222222 369999
Q ss_pred ccCcccceEEEEEEEcCCeeeEE--EEEEEEeCCCCCCCCCceecccccceEEEEecCCCCCCCeeeeEEEEEEEcCCCC
Q psy7042 1852 EIRKEDAGDYTVNLSNSSGSVSG--TFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMP 1929 (2245)
Q Consensus 1852 ~~~~~d~G~Y~C~a~n~~g~~~~--~~~l~v~~~p~~~~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~ 1929 (2245)
++..+|+|.|+|.|.|..+.... .+.+.|..+
T Consensus 161 ~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~~---------------------------------------------- 194 (291)
T 1qz1_A 161 GIKKTDEGTYRCEGRILARGEINFKDIQVIVNVP---------------------------------------------- 194 (291)
T ss_dssp TCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEEEE----------------------------------------------
T ss_pred cCccccCeEEEEEEEecCCCceeeEEEEEEEecC----------------------------------------------
Confidence 99999999999999987543322 222222100
Q ss_pred ceEEEeeecCcceEEecCCCCCCeEEEEEEEECCCCCCCCCCCcCceeccCCCCCCCCCCCcEEEEEcCCeEEEEEeccC
Q psy7042 1930 HWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPL 2009 (2245)
Q Consensus 1930 ~~~~~~~~~~~~~~~i~~l~~~~~y~~~~~a~n~~g~~~~s~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~v~l~W~~p~ 2009 (2245)
T Consensus 195 -------------------------------------------------------------------------------- 194 (291)
T 1qz1_A 195 -------------------------------------------------------------------------------- 194 (291)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCceeEEEEEEeeecCccceEEEEEEeccceEEeCCCcCCceEEEEEEEEeccccCCCcCCCCcccccCcccCCCce
Q psy7042 2010 DDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPE 2089 (2245)
Q Consensus 2010 ~~~~~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~s~~v~~~~~~~~~~p~ 2089 (2245)
|.
T Consensus 195 ------------------------------------------------------------------------------p~ 196 (291)
T 1qz1_A 195 ------------------------------------------------------------------------------PT 196 (291)
T ss_dssp ------------------------------------------------------------------------------EE
T ss_pred ------------------------------------------------------------------------------Cc
Confidence 11
Q ss_pred EEe--eccceeeecCccEEEEEEEEeeCCCeEEEeeCCEeeCCCC----cEEEEEeCcEEEEEEcCCCCCCCeEEEEEEE
Q psy7042 2090 IIV--PLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSA----RHHIFAEGDTYTLIINSVYGVDADEYVCRAV 2163 (2245)
Q Consensus 2090 ~~~--~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~----~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 2163 (2245)
+.. .+.+..+.+|+.++|.|.+.|.|.|.|.|+|+|..+.... ++.+..++ ..|.|.++..+|+|.|+|.|.
T Consensus 197 ~~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~--~~L~i~~v~~~d~G~Y~C~a~ 274 (291)
T 1qz1_A 197 VQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEEEDDEKHIFSDDS--SELTIRNVDKNDEAEYVCIAE 274 (291)
T ss_dssp EEESCSEEEEETTSCCCEEEEEEEEEESCCEEEEEETTEECCCC--CCSSEEECTTS--CEEEECSCCGGGCEEEEEEEE
T ss_pred ccccccccccccccCceEEEEEEEEEeCCCcEEEEECCEECcCCCCCCcceEEcCCC--cEEEEEecChhcCEEEEEEEE
Confidence 110 0112346789999999999999999999999999998764 44443333 489999999999999999999
Q ss_pred eCCceeeEEEEEEEEc
Q psy7042 2164 NKGGVKSTKAELIIMT 2179 (2245)
Q Consensus 2164 N~~G~~~~~~~l~V~~ 2179 (2245)
|.+|..+.++.|.|.+
T Consensus 275 N~~G~~~~~~~l~V~~ 290 (291)
T 1qz1_A 275 NKAGEQDASIHLKVFA 290 (291)
T ss_dssp ETTEEEEEEEEEEEEC
T ss_pred eCCCceEEEEEEEEEc
Confidence 9999999999999964
No 56
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.96 E-value=5.8e-28 Score=310.56 Aligned_cols=370 Identities=13% Similarity=0.163 Sum_probs=236.6
Q ss_pred CCcceEEeCCCeEEEEEEEeeec--CCceEEEEC--Ceecc-----------------CCCeEEEEEc--CcEEEEEEee
Q psy7042 96 PLKDLVVPLGKLLTLQCEATGTP--VPKCRWLRN--GREIS-----------------SGARYRVETA--GGVFRLHFNE 152 (2245)
Q Consensus 96 ~~~~~~v~~G~~v~L~C~~~g~p--~~~i~W~~~--g~~l~-----------------~~~~~~~~~~--~~~~~L~i~~ 152 (2245)
.|..+.+.+|+.++|.|.+.+.+ .+.|.|+|+ |..+. ..+|+.+..+ ++..+|.|.+
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (444)
T 1igt_B 6 ESGGGLVQPGGSLKLSCATSGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQMSR 85 (444)
T ss_dssp EECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTSSCEECCGGGTTTEEEEEETTTTEEEEEECS
T ss_pred cCCCeEEcCCCCEEEEEEcCCCccCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEeCCCCeEEEEECC
Confidence 34557899999999999998764 578999985 33211 1247777653 4567899999
Q ss_pred eccCCCeEEEEEEEcCccc---ceeEEEEEecC----CCeeecCCCceEEcCCCeEEEEEEEecC-CCc-eEEEeeCcee
Q psy7042 153 VTDVDNGDYTCEAYNSVGF---AHTSSRVKIGT----PPRIDRMPNALYIPEGDNTKVKIFYAGD-QPM-EVSLTKNGRV 223 (2245)
Q Consensus 153 ~~~~d~G~Y~C~a~n~~g~---~~~~~~l~V~~----~P~~~~~~~~~~v~~G~~~~l~C~~~g~-p~~-~i~W~~~g~~ 223 (2245)
++.+|+|.|+|.|.|..+. ....+.|.|.. +|.+...+....+.+|+.++|.|.+.|. |.+ .|+|+|++..
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~ 165 (444)
T 1igt_B 86 LKSEDTAMYYCARHGGYYAMDYWGQGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLS 165 (444)
T ss_dssp CCGGGCEEEEEEEECSSSCEEEEBCCEEEEECSCCCBCCEEEEECCCSSCCCSSCEEEEEEEEEEBSSCCEEEEGGGTBC
T ss_pred CCHHHCEEEEEEEecCCcccccccCcEEEEecCCCCCCCceeEecccccCCCCCcEEEEEEEcceeCCCcEEEEecCCCC
Confidence 9999999999999997654 22346788874 4555433333345899999999999884 776 9999999876
Q ss_pred ee--cCCceEEEEeC---CeEEEEEcccCccCceeEEEEEEcCCcceEEEEEEEEecCCCCCCCCcccceeeccceEEEe
Q psy7042 224 VQ--SDDRFKFTVLD---DYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHW 298 (2245)
Q Consensus 224 l~--~~~~~~~~~~~---~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~s~~~~w 298 (2245)
+. ..... ...+ ....|.|.++..+| |.|+|.|.|..|.......+.+.++.
T Consensus 166 ~~~~~~~~~--~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~i~~~~~~--------------------- 221 (444)
T 1igt_B 166 SGVHTFPAV--LQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRGPT--------------------- 221 (444)
T ss_dssp TTEEECCCE--EETTEEEEEEEEEECSTTTTT-SCCEEEEEETTTTEEEEEECCCCCCS---------------------
T ss_pred CCeEecCcc--ccCCcEEEEEEEEEchhhcCC-CeEEEEEEeCCCCcceEEEeccCCCC---------------------
Confidence 31 11110 0001 12469999999999 99999999998865433332211000
Q ss_pred cCCCCCCCceeEEEEEEEEecCCCceEEeeeccCcceEEEcCCCCCCEEEEEEEEEecCCCCCCCCCCCceecCCCCCCC
Q psy7042 299 NPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKP 378 (2245)
Q Consensus 299 ~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~c~a~n~~g~~~~~~~~~~~~~~~~~~~p 378 (2245)
T Consensus 222 -------------------------------------------------------------------------------- 221 (444)
T 1igt_B 222 -------------------------------------------------------------------------------- 221 (444)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCcEEEeecCCeeEEEecCCCCCCCCCccEEEEEeeecCCCCcEEEeeeecCCceeecCCcccCceEEEEEEeecCC
Q psy7042 379 SPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEA 458 (2245)
Q Consensus 379 ~~~~~~~v~~~~~~~~~l~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~ 458 (2245)
.|+|....
T Consensus 222 ----------------------------------------------------------------------~~~~~~~~-- 229 (444)
T 1igt_B 222 ----------------------------------------------------------------------IKPCPPCK-- 229 (444)
T ss_dssp ----------------------------------------------------------------------CCCCCCCS--
T ss_pred ----------------------------------------------------------------------cccCCccc--
Confidence 00000000
Q ss_pred CCCCCCCCCCcEEecCCcccCCCce-eccccccc-cccccceeeEEEEeccC----cCeEEEEeCCeecCCCccE--EEE
Q psy7042 459 GLSLPSSASNSVQIKDPMAAKAPEI-IVPLRNAN-AIQNHNAQFQCTITGCP----KPTISWLKGSREITPSARH--HIF 530 (2245)
Q Consensus 459 g~~~~s~~~~~v~~~~~~~~~~p~~-~~~~~~~~-~~~g~~~~l~C~~~g~p----~~~v~W~~~~~~i~~~~~~--~~~ 530 (2245)
... .....+|.+ +.++.... +.+|+++.|.|.+.|.+ .+.++|+|++..+...... ...
T Consensus 230 -------~~~------~~~~~~p~v~~~~p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~ 296 (444)
T 1igt_B 230 -------CPA------PNLLGGPSVFIFPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHRED 296 (444)
T ss_dssp -------CCC------SCCCCCCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTCCCCEEEEEETTEECSSTTCBCCEEE
T ss_pred -------cCC------cccCCCceEEecCCchhheeecCCCcEEEEEEeecccCCCCeEEEEEECCccccCcccccceeC
Confidence 000 000012333 22222233 58899999999999974 3699999999887643221 112
Q ss_pred eeC---CeEEEEEecccccCCceEEEEEEeCCCCCCcceeE----eEecCCCCCCCCCcccceEeeCCCeEEEEEeeee-
Q psy7042 531 AEG---DTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAEL----IIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTG- 602 (2245)
Q Consensus 531 ~~~---~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l----~v~~~p~~~~~p~~~~~~~~~~g~~~~l~C~~~g- 602 (2245)
.++ ....|.|.++..+|+|.|+|.|.|..|.......+ .+..+|.+...+... ..+. +..++|.|.+.|
T Consensus 297 ~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~--~~~~-~~~~~L~C~~~g~ 373 (444)
T 1igt_B 297 YNSTLRVVSALPIQHQDWMSGKEFKCKVNNKDLPAPIERTISKPKGSVRAPQVYVLPPPE--EEMT-KKQVTLTCMVTDF 373 (444)
T ss_dssp CSSSEEEEEEEECCHHHHHTTCEEEEEEECTTCSSCEEEEEECCCCCCBCCEEEEECCCG--GGTT-SSEEEEEEEEEEE
T ss_pred CCCcEEEEEEEEEcHHHhccCCcEEEEEEcCCCCCceEEEEeccCCCCCCCEEEEeCCCh--HHcc-CCeEEEEEEEEee
Confidence 122 23489999999999999999999998876444444 233445443222111 1123 445999999998
Q ss_pred cCCC-eEEEEeCCeEeeccCeEEEEec-CC----eEEEEEcCCCCCcCEEEEEEEEeCCCC
Q psy7042 603 YPKP-KITWYRDNEVIESGGHFHVETS-ER----HAILTIRDASNVDTAPYRVVAENDLGM 657 (2245)
Q Consensus 603 ~p~~-~i~W~~~~~~~~~~~~~~~~~~-~~----~~~l~i~~~~~~d~g~y~C~a~n~~g~ 657 (2245)
.|++ .|+|+++|..+........... +. ...|.|.....+|.|.|+|.|.|..-.
T Consensus 374 ~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~a~n~~l~ 434 (444)
T 1igt_B 374 MPEDIYVEWTNNGKTELNYKNTEPVLDSDGSYFMYSKLRVEKKNWVERNSYSCSVVHEGLH 434 (444)
T ss_dssp BSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTCCCEEEEEECTTSG
T ss_pred eCCCCEEEEEECCEEccccccccceeCCCCCEEEEEEEEEChHHhcCCCeEEEEEECCCcC
Confidence 4555 8999999998743211111111 11 234667666667799999999997643
No 57
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.96 E-value=9.6e-28 Score=309.53 Aligned_cols=371 Identities=11% Similarity=0.164 Sum_probs=231.5
Q ss_pred CcceEEeCCCeEEEEEEEeeec--CCceEEEEC--Cee---c--------------cCCCeEEEEEc--CcEEEEEEeee
Q psy7042 97 LKDLVVPLGKLLTLQCEATGTP--VPKCRWLRN--GRE---I--------------SSGARYRVETA--GGVFRLHFNEV 153 (2245)
Q Consensus 97 ~~~~~v~~G~~v~L~C~~~g~p--~~~i~W~~~--g~~---l--------------~~~~~~~~~~~--~~~~~L~i~~~ 153 (2245)
+..+.+.+|+.++|.|.+.+.| .+.|.|+|+ |.. + ....|+.+..+ ++...|.|.++
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (457)
T 1hzh_H 7 SGAEVKKPGASVKVSCQASGYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRSL 86 (457)
T ss_dssp CCCEEECTTCCEEECEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECSC
T ss_pred CCceEEcCCCCEEEEEEecCccccCcEEEEEEeCCCCCcEEEEEEecCCCceecCccccCceEEEEeCCCCEEEEEECCC
Confidence 4457889999999999998876 678999984 321 1 01347777654 45678999999
Q ss_pred ccCCCeEEEEEEEcCcc------------cceeEEEEEecC----CCeeecCCCceEEcCCCeEEEEEEEecC-CC-ceE
Q psy7042 154 TDVDNGDYTCEAYNSVG------------FAHTSSRVKIGT----PPRIDRMPNALYIPEGDNTKVKIFYAGD-QP-MEV 215 (2245)
Q Consensus 154 ~~~d~G~Y~C~a~n~~g------------~~~~~~~l~V~~----~P~~~~~~~~~~v~~G~~~~l~C~~~g~-p~-~~i 215 (2245)
+.+|+|.|+|.|.|..| .....+.|.|.. +|.+...+....+.+|+.++|.|.+.|. |. +.|
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v 166 (457)
T 1hzh_H 87 RSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTV 166 (457)
T ss_dssp CGGGCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCCCBCCEEEEECCCSCCCTTCCEEEEEEEESBBSCCCEE
T ss_pred CcccCEEEEEEEecCCccccccccccccceECCcEEEEecCCCCCCCeEEecCccccccCCCcEEEEEEEeEEeCCCeEE
Confidence 99999999999999875 223456788865 5666555544557899999999999986 64 899
Q ss_pred EEeeCceeeecCCceEEEEeCC----eEEEEEcccCccCceeEEEEEEcCCcceEEEEEEEEecCCCCCCCCcccceeec
Q psy7042 216 SLTKNGRVVQSDDRFKFTVLDD----YIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITK 291 (2245)
Q Consensus 216 ~W~~~g~~l~~~~~~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~ 291 (2245)
+|+|+|..+...........++ ...|.|.++..+| |.|+|.|.|..+.......+.+...+..
T Consensus 167 ~W~k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~v~~~~~~~~------------ 233 (457)
T 1hzh_H 167 SWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKAEPKSCDKT------------ 233 (457)
T ss_dssp EETTTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGGGTEEEEEECCCCCSCSS------------
T ss_pred EEEeCCEeccceEcCceECCCCCEEEEEEEEecccccCC-ceEEEEEEeCCCCcceeEEecccCCCcc------------
Confidence 9999996542110000111111 2369999999999 9999999997766543333322111000
Q ss_pred cceEEEecCCCCCCCceeEEEEEEEEecCCCceEEeeeccCcceEEEcCCCCCCEEEEEEEEEecCCCCCCCCCCCceec
Q psy7042 292 HTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKA 371 (2245)
Q Consensus 292 ~s~~~~w~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~c~a~n~~g~~~~~~~~~~~~~ 371 (2245)
T Consensus 234 -------------------------------------------------------------------------------- 233 (457)
T 1hzh_H 234 -------------------------------------------------------------------------------- 233 (457)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCCCCcEEEeecCCeeEEEecCCCCCCCCCccEEEEEeeecCCCCcEEEeeeecCCceeecCCcccCceEEEE
Q psy7042 372 KSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFR 451 (2245)
Q Consensus 372 ~~~~~~p~~~~~~~v~~~~~~~~~l~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~ 451 (2245)
|+
T Consensus 234 ------------------------------------------------------------------------------~~ 235 (457)
T 1hzh_H 234 ------------------------------------------------------------------------------HT 235 (457)
T ss_dssp ------------------------------------------------------------------------------CS
T ss_pred ------------------------------------------------------------------------------cc
Confidence 00
Q ss_pred EEeecCCCCCCCCCCCCcEEecCCcccCCCce-eccccccc-cccccceeeEEEEeccCcC----eEEEEeCCeecCCCc
Q psy7042 452 VYAQNEAGLSLPSSASNSVQIKDPMAAKAPEI-IVPLRNAN-AIQNHNAQFQCTITGCPKP----TISWLKGSREITPSA 525 (2245)
Q Consensus 452 c~a~n~~g~~~~s~~~~~v~~~~~~~~~~p~~-~~~~~~~~-~~~g~~~~l~C~~~g~p~~----~v~W~~~~~~i~~~~ 525 (2245)
|.+... +....+|.+ +.++.... +.+|+++.|.|.+.|.|++ .++|+|++..+....
T Consensus 236 ~~~~~~-----------------~~~~~~p~v~~~~p~~~~~~~~G~~v~L~C~~~g~~p~p~~~~i~W~k~~~~~~~~~ 298 (457)
T 1hzh_H 236 CPPCPA-----------------PELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAK 298 (457)
T ss_dssp CCSCCC-----------------CCCSSSCEEEEECCCHHHHHCTTSCCCEEEEEECCCTTCCCCEEEEEETTEEECCCE
T ss_pred cCCCCC-----------------ccccCCceEEeECcCchhhcccCCceEEEEEEEcccCCCCceEEEEEeCCccccccc
Confidence 000000 000012332 22222222 6789999999999997553 999999998876543
Q ss_pred cEE-EEeeCCeE----EEEEecccccCCceEEEEEEeCCCCCCcceeEe----EecCCCCCCCCCcccceEeeCCCeEEE
Q psy7042 526 RHH-IFAEGDTY----TLIINSVYGVDADEYVCRAVNKGGVKSTKAELI----IMTAPKFNVPPRFRDTAYFDKGENVVV 596 (2245)
Q Consensus 526 ~~~-~~~~~~~~----~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~----v~~~p~~~~~p~~~~~~~~~~g~~~~l 596 (2245)
... ....++.. .|.|.....+|+|.|+|.|.|..+.......+. +..+|.+...+... ..+..|+ ++|
T Consensus 299 ~~~~~~~~~g~~~~~~~l~i~~~d~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~--~~~~~~~-~~l 375 (457)
T 1hzh_H 299 TKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSR--DELTKNQ-VSL 375 (457)
T ss_dssp EEEEEECTTSCEEEEEEECCCHHHHHHTCCEEEEEECTTSSSCEEEEECCCCCCCBCCEEEEECCCG--GGGGSSE-EEE
T ss_pred cccceecCCCcEEEEEEEEECHHHccCCCcEEEEEeCCCCCCcceEEEEcccCCCCCCeEEEECCCc--cccCCCc-EEE
Confidence 222 12222211 222223333449999999998766554333343 23444443222111 1133455 999
Q ss_pred EEeeeecCCC--eEEEEeCCeEeeccCeEEEEecCC-----eEEEEEcCCCCCcCEEEEEEEEeCCCCc
Q psy7042 597 KIPFTGYPKP--KITWYRDNEVIESGGHFHVETSER-----HAILTIRDASNVDTAPYRVVAENDLGMD 658 (2245)
Q Consensus 597 ~C~~~g~p~~--~i~W~~~~~~~~~~~~~~~~~~~~-----~~~l~i~~~~~~d~g~y~C~a~n~~g~~ 658 (2245)
.|.+.|.|++ .|+|+++|..+............. ...|.|.....+|.|.|+|.|.|..-..
T Consensus 376 ~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~~ 444 (457)
T 1hzh_H 376 TCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHN 444 (457)
T ss_dssp EEEEEEEBSSCCEEEEEETTEECCCEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSGG
T ss_pred EEEEEeEECCCCEEEEEECCEECcceeecCceeCCCCCEEEEEEEEEChHHccCCCeEEEEEEECCCCC
Confidence 9999997544 899999999885432221111111 2345666665578999999999976544
No 58
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=99.95 E-value=3.5e-26 Score=286.23 Aligned_cols=354 Identities=21% Similarity=0.274 Sum_probs=262.2
Q ss_pred CCCCCCCCeeeeecCC-cEEEEeeCCCCCCCcccccEEEEeeeCCCC---CeEEEceeeeeeEEEecCCCCCEEEEEEEE
Q psy7042 669 RPDPPQFPTVEDIGHD-SLALVWRAPIWDGGSNITNYIVEKREHPMS---SWIRVGNTRFTTMAITGLSPGHQYEFRVYA 744 (2245)
Q Consensus 669 ~P~~p~~~~~~~~~~~-si~lsW~~p~~~~~~~~~~y~v~~~~~~~~---~w~~~~~~~~~~~~i~~L~p~t~y~~~v~a 744 (2245)
||.+|.++.+...+.. ++.|+|++|. ++.+.+|.|+++..... .|.........++.+.+|.|++.|.|+|.|
T Consensus 1 Pp~~P~~l~~~~~~~~~sv~l~W~~~~---~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a 77 (368)
T 1fnf_A 1 PLSPPTNLHLEANPDTGVLTVSWERST---TPDITGYRITTTPTNGQQGNSLEEVVHADQSSCTFDNLSPGLEYNVSVYT 77 (368)
T ss_dssp CCCCCEEEEEEECSSSSCEEEEEECCS---CSSCCEEEEEEEETTTCSSCCEEEEECTTCCEEECCCCCTTSCEEEEEEE
T ss_pred CCCCCcceEEEecCCCcEEEEEEeCCC---CCCceEEEEEEEECCCCCCceeEEEecCCcCEEEECCCCCCCEEEEEEEE
Confidence 6889999999988876 5999999763 35789999999986543 355544445678999999999999999999
Q ss_pred EecccCCCCCCCCccEEecCccccccccccccccCCCceeecccccccccCCceEEEEeeeccCccccccccceeccccc
Q psy7042 745 ENVYGRSDPSTTSDLITTKDTFKKQIKKRQYDFDETGKKIRGKADEKVSDYDQYVFDIYSKYVPQPVDIKTSSVYDHYDI 824 (2245)
Q Consensus 745 ~n~~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 824 (2245)
.|..|.+.++. .
T Consensus 78 ~~~~g~s~~~~---~----------------------------------------------------------------- 89 (368)
T 1fnf_A 78 VKDDKESVPIS---D----------------------------------------------------------------- 89 (368)
T ss_dssp EETTEECCCEE---E-----------------------------------------------------------------
T ss_pred EcCCCccCcee---e-----------------------------------------------------------------
Confidence 99988654321 0
Q ss_pred ccccccCceeEEEEeeecccCCeeEEEeeccCCchhhhhhheeeeeeeccCCCceEeecccccCCcceEEEEEEecCCCC
Q psy7042 825 LEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFEVLDRPHP 904 (2245)
Q Consensus 825 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ 904 (2245)
.....|.+
T Consensus 90 ------------------------------------------------------------------------~~~~~~~~ 97 (368)
T 1fnf_A 90 ------------------------------------------------------------------------TIIPAVPP 97 (368)
T ss_dssp ------------------------------------------------------------------------EECCCCCC
T ss_pred ------------------------------------------------------------------------eecCCCcC
Confidence 00012347
Q ss_pred CcccEEeeeeCceEEEEecCCCCCCCCccceEEEeeeecCCC-ceEEecceeeeceEEEecCCCCceeeEEEEEEecccc
Q psy7042 905 PENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNST-VWTKVSSYVTTPFVRVRNLAIGSTYEFRVMAENQYGL 983 (2245)
Q Consensus 905 p~~l~~~~~~~~~~~l~W~~p~~~~g~~i~~y~i~~~~~~~~-~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~ 983 (2245)
|.+|.+...+.+++.|+|+++.. ..+.+|.|+++..... .|..+........+.+.+|.|++.|.|+|+|.|..|.
T Consensus 98 p~~l~~~~~~~~si~l~W~~p~~---~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~ 174 (368)
T 1fnf_A 98 PTDLRFTNIGPDTMRVTWAPPPS---IDLTNFLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHE 174 (368)
T ss_dssp CEEEEEESCCSSCEEEEEECCTT---CCCSEEEEEEEETTCTTCCEEEEECTTCCEEEECSCCTTCEEEEEEEEEETTEE
T ss_pred CceeEEEEcCCCeEEEEeeCCCC---CCCcEEEEEEEECCCCCccEEEEcCCCcceEEecCCCCCCEEEEEEEEEeCCCC
Confidence 88999988899999999999842 3799999999975543 5666665667789999999999999999999999997
Q ss_pred CCCccccCcccccCCCCCCCCCCCCeeEeecCCeEEEEecCCCCCCCCccceEEEEEEecCCc-cceeccccccCCccee
Q psy7042 984 SKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDD-KWIKASMAHIPDTSLK 1062 (2245)
Q Consensus 984 ~~~s~~~~~~~~~t~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~-~~~~~~~~~~~~~~~~ 1062 (2245)
+.+.. ... ...|.+|.++.+...+.+++.|+|.+|. +++.+|.|+|+..+.. .+..... +....
T Consensus 175 s~~~~----~~~---~~~~~~P~~l~~~~~~~~sv~l~W~~p~----~~i~~Y~v~~~~~~~~~~~~~~~~---~~~~~- 239 (368)
T 1fnf_A 175 STPLR----GRQ---KTGLDSPTGIDFSDITANSFTVHWIAPR----ATITGYRIRHHPEHFSGRPREDRV---PHSRN- 239 (368)
T ss_dssp CCCEE----EEE---ECCCCCCEEEEEESCCSSEEEEEEECCS----SCCSEEEEEEECSCCSSCCEEEEE---ETTCC-
T ss_pred CCCeE----eee---cCCCCCCCccEEEEccCCEEEEEEeCCC----CCcCEEEEEEecCCCCCCccEEEe---CCCcC-
Confidence 76532 111 2345678888888889999999999875 3589999999866532 2211111 11111
Q ss_pred EEEEeecccccCCccCchhhhhhhhhcccccccccccCCcEEEEEEEEEecCCCCCCCCCCcceeecCCCCCCccccCCC
Q psy7042 1063 YVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSDIIMCCAPPCAPKITSDLS 1142 (2245)
Q Consensus 1063 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~v~A~n~~G~~~~s~~~~~~~~~~~p~~p~~~~~~~ 1142 (2245)
.++|.+|.+++.|.|+|+|.|..|.++++. ....
T Consensus 240 -----------------------------~~~i~~L~p~t~Y~~~V~A~n~~g~~~~~~----~~~~------------- 273 (368)
T 1fnf_A 240 -----------------------------SITLTNLTPGTEYVVSIVALNGREESPLLI----GQQS------------- 273 (368)
T ss_dssp -----------------------------EEEEESCCTTCEEEEEEEEEETTEECCCEE----EEEE-------------
T ss_pred -----------------------------EEEECCCCCCCEEEEEEEEEeCCccCCccc----cccc-------------
Confidence 126999999999999999999988654321 0000
Q ss_pred ceeEEEEcCCeEEEEEEeeecCCCcceEEeCCeecCCCCcEEEEEccceEEEEecCccccccceeEEEEEEcCCcceeEE
Q psy7042 1143 IRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSAS 1222 (2245)
Q Consensus 1143 ~~~~~v~~~~~~~l~~~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~a~n~~g~~~~s 1222 (2245)
T Consensus 274 -------------------------------------------------------------------------------- 273 (368)
T 1fnf_A 274 -------------------------------------------------------------------------------- 273 (368)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEEECCCCCCCCCceeeeccCCcEEEEecCCCCCCCcceeeeEEEEeecccc-ceEEcccceecceEEecCCCCCceE
Q psy7042 1223 CKVYVVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATG-FWSKLSSFVRSPAYDVFGLETNRQY 1301 (2245)
Q Consensus 1223 ~~~~v~~~p~~p~~~~~~~~~~~~s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~-~~~~~~~~~~~~~~~l~~L~~~t~Y 1301 (2245)
+.|.+| .++.+...+.+++.|+|++|... +.+|.|+|....+. .+.........+.+.+.+|.+++.|
T Consensus 274 ------t~p~~P-~~l~~~~~~~~sv~l~W~~p~~~----i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y 342 (368)
T 1fnf_A 274 ------TVSDVP-RDLEVVAATPTSLLISWDAPAVT----VRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDY 342 (368)
T ss_dssp ------CCCCSC-EEEEEEEEETTEEEEEEECCSSC----CSEEEEEEEETTCCSCCEEEEEETTCCEEEECSCCTTCCE
T ss_pred ------CCCCCC-CeeEEEecCCCEEEEEeeCCCCc----cceEEEEEEECCCCCccEEEEcCCCeeEEEecCCCCCCEE
Confidence 122222 34666666788999999988542 89999998876443 2333444556788999999999999
Q ss_pred EEEEEEeccccCCCCcccC
Q psy7042 1302 RFRVRAENQYGVSEPLELD 1320 (2245)
Q Consensus 1302 ~~~v~A~n~~G~~~~s~~~ 1320 (2245)
.|+|+|.|..|.|.++...
T Consensus 343 ~~~V~A~~~~G~g~~s~~~ 361 (368)
T 1fnf_A 343 TITVYAVTGRGDSPASSKP 361 (368)
T ss_dssp EEEEEEECCCSSSCCBCCC
T ss_pred EEEEEEeCCCCcCcccCce
Confidence 9999999999999876543
No 59
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=99.95 E-value=2.1e-25 Score=298.54 Aligned_cols=470 Identities=17% Similarity=0.205 Sum_probs=287.1
Q ss_pred EecCCCCC-cccEEeeeeCceEEEEecCCCCCCCCccceEEEeeeecCC--------CceEEecceeeeceEEEecCCCC
Q psy7042 898 VLDRPHPP-ENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNS--------TVWTKVSSYVTTPFVRVRNLAIG 968 (2245)
Q Consensus 898 ~~~~P~~p-~~l~~~~~~~~~~~l~W~~p~~~~g~~i~~y~i~~~~~~~--------~~~~~~~~~~~~~~~~i~~L~p~ 968 (2245)
+.+.|.+| .++.+...+.+++.|+|+++.+.++.++. |.|+++...+ ..|..+.. .....+.|.+|.|+
T Consensus 156 ~~~~P~~P~~~l~v~~~~~~sv~l~W~pp~~~~~~~i~-Y~V~~r~~~g~~~~~~~~~~w~~v~~-~~~~~~~i~~L~P~ 233 (680)
T 1zlg_A 156 YKGVPLKPRKELRFTELQSGQLEVKWSSKFNISIEPVI-YVVQRRWNYGIHPSEDDATHWQTVAQ-TTDERVQLTDIRPS 233 (680)
T ss_pred eecccccccccceEEeccCceEEEEEeCCCCCCCCCEE-EEEEEEECCCCCcCccccCceEEEEe-cCCCeEEeCCCCCC
Confidence 46789999 89999999999999999998665555777 9999987533 56776654 35568999999999
Q ss_pred ceeeEEEEEEeccccCCCccccCcccccCCCCCCCCCCCCeeEee--cCC---eEEEEecCCCCCCCCccceEEEEEEec
Q psy7042 969 STYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDS--TED---SISLVWSKPRHDGGSPIQRYIVEKRLI 1043 (2245)
Q Consensus 969 ~~y~~~v~a~n~~g~~~~s~~~~~~~~~t~~~~p~~p~~~~~~~~--~~~---~v~l~W~~p~~~~~~~i~~y~v~~~~~ 1043 (2245)
+.|.|+|.|.|..|.+..+..+..+........|.+|.++++... +.+ +|.|+|++|...+ ++|.+|.|+|+..
T Consensus 234 t~Y~frV~A~n~~G~~~~ss~s~~~~t~~~~~pp~~P~~l~~~~~~~~~~g~~sv~l~W~pP~~~~-g~i~~Y~V~~~~~ 312 (680)
T 1zlg_A 234 RWYQFRVAAVNVHGTRGFTAPSKHFRSSKDPSAPPAPANLRLANSTVNSDGSVTVTIVWDLPEEPD-IPVHHYKVFWSWM 312 (680)
T ss_pred CEEEEEEEEEeCCCCCCCCCCccceEcCCCCCCCCCCCceEeeeeeecCCCceEEEEEecCCCCCC-CceeEEEEEEEec
Confidence 999999999999994433332222222222257789999999888 778 9999999987655 5799999999832
Q ss_pred -CC------ccceeccccccCCcceeEEEEeecccccCCccCchhhhhhhhhcccccccccccCCcEEEEEEEEEecCCC
Q psy7042 1044 -SD------DKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQ 1116 (2245)
Q Consensus 1044 -~~------~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~v~A~n~~G~ 1116 (2245)
+. ..|....+. ... +.++|.+|.+++.|.|+|+|.|..|.
T Consensus 313 ~~~~~~~~~~~~~~~~v~---~~~------------------------------~~~~l~~L~p~t~Y~~~V~A~n~~G~ 359 (680)
T 1zlg_A 313 VSSKSLVPTKKKRRKTTD---GFQ------------------------------NSVILEKLQPDCDYVVELQAITYWGQ 359 (680)
T ss_pred ccccccCCccceEEEEEc---CCe------------------------------eEEEeCCCCCCCEEEEEEEEEECCCc
Confidence 11 112221111 000 11269999999999999999999999
Q ss_pred CCCCCCCcceeecCCCCCCccccCCCceeEEEEcCCeEEEEEEeeecCCCcceEEeCCeecCCCCcEEEEEccceEEEEe
Q psy7042 1117 GPWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIYRN 1196 (2245)
Q Consensus 1117 ~~~s~~~~~~~~~~~p~~p~~~~~~~~~~~~v~~~~~~~l~~~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~ 1196 (2245)
|+++.........+.+.+|. +.++.+...+...+.+.+ ..
T Consensus 360 g~~S~~~~~v~~~T~~~~P~------p~~l~~~~~s~tsi~lp~----------~~------------------------ 399 (680)
T 1zlg_A 360 TRLKSAKVSLHFTSTHATNN------KEQLVKTRKGGIQTQLPF----------QR------------------------ 399 (680)
T ss_pred CCCCCCceeEEEECCCCCCC------ccccccccccCccccccc----------cc------------------------
Confidence 98877633333333333331 122222111111111100 00
Q ss_pred cCccccccceeEEEEEEcCCcceeEEEEEEEECCCCCCCCCceeeeccCCcEEEEecCCCCCCCcceeeeEEEEeecc--
Q psy7042 1197 KSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESA-- 1274 (2245)
Q Consensus 1197 ~~~~~~~~~~~Y~~~a~n~~g~~~~s~~~~v~~~p~~p~~~~~~~~~~~~s~~l~W~~p~~~~g~~i~~Y~v~~~~~~-- 1274 (2245)
. .....+. ..+|.. ........|.|.... ...+.+|.|++....
T Consensus 400 --------------------~--~~~~~l~-W~~P~~--------~~~~~~y~v~w~~~~---~~~v~~Y~V~w~~~~~~ 445 (680)
T 1zlg_A 400 --------------------R--RPTRPLE-VGAPFY--------QDGQLQVKVYWKKTE---DPTVNRYHVRWFPEACA 445 (680)
T ss_pred --------------------c--CCCcccc-ccCCcc--------cCCcceEEEEEeCCC---CCccceEEEEEeeeecc
Confidence 0 0000000 011110 012235678887542 223677888765331
Q ss_pred --ccceEE-cccceecceEEecCCCCCceEEEEEEEeccccCCCCcccC---C-----------cccccC---C--CCCC
Q psy7042 1275 --TGFWSK-LSSFVRSPAYDVFGLETNRQYRFRVRAENQYGVSEPLELD---N-----------SITAKF---P--FTVP 1332 (2245)
Q Consensus 1275 --~~~~~~-~~~~~~~~~~~l~~L~~~t~Y~~~v~A~n~~G~~~~s~~~---~-----------~~~~~~---~--~~~p 1332 (2245)
...|.. .......+++.|.+|.+++.|.|+|+|.|..|.+.+.... . .+.... + ..++
T Consensus 446 ~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~s~~~~~~f~T~~~~~~~~~~~~~v~~~~~~~P~~~~v~ 525 (680)
T 1zlg_A 446 HNRTTGSEASSGMTHENYIILQDLSFSCKYKVTVQPIRPKSHSKAEAVFFTTPPCSALKGKSHKPIGCLGEAGHVLSKVL 525 (680)
T ss_pred cCCCCcceeeeeeccCceEEecCCCCCCeEEEEEEEecCCCCCCccccceeCCCccccccCCccccccCCCCcccccccc
Confidence 111211 1134456789999999999999999999999965422110 0 000000 0 1123
Q ss_pred CCCCC----CeeeeccCCcEEEEeeCCCCCCCccceeeEEEEecCCCCCCcceeeeeccCcceeEeeeccccCCCCCCCC
Q psy7042 1333 DPPGQ----PQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTSSTVYCKDTTMNSSNSEPGK 1408 (2245)
Q Consensus 1333 ~~p~~----~~~~~~~~~s~~l~W~~p~~~~g~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~y~c~~~~~~~~~~~~~~ 1408 (2245)
.+|.+ +.+..++.. +.|+|.+|..+.+++|.+|.|.|+...+... ...
T Consensus 526 ~~P~~l~~~v~v~~~~~t-i~lsW~pP~~~~ng~I~gY~V~y~~~~~~~~---------------------------~~~ 577 (680)
T 1zlg_A 526 AKPENLSASFIVQDVNIT-GHFSWKMAKANLYQPMTGFQVTWAEVTTESR---------------------------QNS 577 (680)
T ss_pred CCccccceeEEEeccCce-EEEEecCCCCCCCCCceeEEEEEEEccCCCc---------------------------ccc
Confidence 66777 445555555 9999999875545599999999975322000 000
Q ss_pred CCCCeEeeeCCCCCcccCCcceeeEEecCCeEEEEeeeecCCCCceeEecCCccccCCCCcEEEeeecceeEEEEccCCc
Q psy7042 1409 QSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQR 1488 (2245)
Q Consensus 1409 ~~~~~~v~~~~~~p~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~ 1488 (2245)
..+.. +.. .....++...++|.+|++
T Consensus 578 --------------------~~~~~-----------------------------~~~-----~~~~~~~~~~~~l~~L~p 603 (680)
T 1zlg_A 578 --------------------LPNSI-----------------------------ISQ-----SQILPSDHYVLTVPNLRP 603 (680)
T ss_pred --------------------cccee-----------------------------eec-----ccccCCcccEEEecCCCC
Confidence 00000 000 001223456889999999
Q ss_pred CCceEEEEEEEcCCcceeeEEEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccchhccccccCcccccCCeEEE
Q psy7042 1489 SDGGQYRLQLKNPAGFDTATLHSRLRTLPDSVNPRCHLPSSTSKERPKFPTHPNHQPWLKWARASLTSKGVDSTEDSISL 1568 (2245)
Q Consensus 1489 ~d~G~Y~c~a~n~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1568 (2245)
...|.++..|.|..|.... ....+.+.... |..|..+ .+...+ .|
T Consensus 604 ~t~Y~~~V~A~n~~G~G~~-~~~~~~T~~~~------------------P~~P~~l---------------~v~~~~-~l 648 (680)
T 1zlg_A 604 STLYRLEVQVLTPGGEGPA-TIKTFRTPELP------------------PSSAHRS---------------HLKHRH-PH 648 (680)
T ss_pred CceEEEEEEEEcCCCcCCC-cceEEECCCCC------------------CCCCCCC---------------eEEecc-ce
Confidence 9999999999999887665 33344433221 1111100 111112 79
Q ss_pred EecCCCCCCCCccceEEEEEEecCCc
Q psy7042 1569 VWSKPRHDGGSPIQRYIVEKRLISDD 1594 (2245)
Q Consensus 1569 ~w~~p~~~~~~~i~~~~~~~~~~~~~ 1594 (2245)
.|.+|...++.+|..|++.++....+
T Consensus 649 ~W~pP~~~~G~~I~~~~~~~~~~~~~ 674 (680)
T 1zlg_A 649 HYKPSPERYGKPIPNPLLGLDSTRTG 674 (680)
T ss_pred eECCCCCCCCCccceeeEEEeecccc
Confidence 99999999999999999998865543
No 60
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.95 E-value=4e-26 Score=295.38 Aligned_cols=375 Identities=13% Similarity=0.144 Sum_probs=235.9
Q ss_pred ecCCcceEEeCCCeEEEEEEEeeec--CCceEEEEC--Ceecc-----------------CCCeEEEEEc--CcEEEEEE
Q psy7042 94 IVPLKDLVVPLGKLLTLQCEATGTP--VPKCRWLRN--GREIS-----------------SGARYRVETA--GGVFRLHF 150 (2245)
Q Consensus 94 ~~~~~~~~v~~G~~v~L~C~~~g~p--~~~i~W~~~--g~~l~-----------------~~~~~~~~~~--~~~~~L~i 150 (2245)
+..|..+.+.+|+.++|.|.+.+.+ .+.|.|+|+ |..+. ..+|+.+..+ ++..+|.|
T Consensus 5 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 84 (475)
T 1iga_A 5 LEQSGAEVKKPGASVKVSCKASGYSFTSYGLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTFTRDTSATTAYMGL 84 (475)
T ss_pred eccCCcEEEeCCCCEEEEEEecCCCCCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEcCCCCeEEEEE
Confidence 3456778899999999999998764 568999995 32110 1346666543 35568999
Q ss_pred eeeccCCCeEEEEEEEcCccc------ceeEEEEEecC----CCeeecCCCceEEcCCCeEEEEEEEecC-CC-c-eEEE
Q psy7042 151 NEVTDVDNGDYTCEAYNSVGF------AHTSSRVKIGT----PPRIDRMPNALYIPEGDNTKVKIFYAGD-QP-M-EVSL 217 (2245)
Q Consensus 151 ~~~~~~d~G~Y~C~a~n~~g~------~~~~~~l~V~~----~P~~~~~~~~~~v~~G~~~~l~C~~~g~-p~-~-~i~W 217 (2245)
.+++.+|+|.|.|.|.|..|. ....+.|.|.. +|.+...+. ..+.+|+.++|.|.+.|. |. + .|.|
T Consensus 85 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~-~~~~~g~~v~L~C~~~g~~P~~p~~v~W 163 (475)
T 1iga_A 85 SSLRPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTVSSASPTSPKVFPLSL-CSTQPDGNVVIACLVQGFFPQEPLSVTW 163 (475)
T ss_pred CCCChhhCEEEEEEEeccCCCccceeeecCceEEEeccCCCcCCeEEecCc-cccCCCCeEEEEEEEeeecCCCceEEEE
Confidence 999999999999999998762 22356788863 455544332 223789999999999986 65 4 9999
Q ss_pred eeCceeeecCCceEEE--EeC---CeEEEEEcccCccCceeEEEEEEcCCcceEEEEEEEEecCCCCCCCCcccceeecc
Q psy7042 218 TKNGRVVQSDDRFKFT--VLD---DYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKH 292 (2245)
Q Consensus 218 ~~~g~~l~~~~~~~~~--~~~---~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~ 292 (2245)
++++..+.......+. ..+ ....|.|..+..+|+|.|+|.|.|..+. .....+.+.. +..+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~-~~~~~v~l~V-~~~~~----------- 230 (475)
T 1iga_A 164 SESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNP-SQDVTVPCPV-PSTPP----------- 230 (475)
T ss_pred cCCCcccceEeCCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCC-ceeeeEeccc-ccCcc-----------
Confidence 9988542111000000 111 1235889999889999999999998763 1222222110 00000
Q ss_pred ceEEEecCCCCCCCceeEEEEEEEEecCCCceEEeeeccCcceEEEcCCCCCCEEEEEEEEEecCCCCCCCCCCCceecC
Q psy7042 293 TCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAK 372 (2245)
Q Consensus 293 s~~~~w~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~c~a~n~~g~~~~~~~~~~~~~~ 372 (2245)
T Consensus 231 -------------------------------------------------------------------------------- 230 (475)
T 1iga_A 231 -------------------------------------------------------------------------------- 230 (475)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCCCcEEEeecCCeeEEEecCCCCCCCCCccEEEEEeeecCCCCcEEEeeeecCCceeecCCcccCceEEEEE
Q psy7042 373 SPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRV 452 (2245)
Q Consensus 373 ~~~~~p~~~~~~~v~~~~~~~~~l~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c 452 (2245)
...|.|
T Consensus 231 --------------------------------------------------------------------------~~~~~~ 236 (475)
T 1iga_A 231 --------------------------------------------------------------------------TPSPST 236 (475)
T ss_pred --------------------------------------------------------------------------cccccc
Confidence 000111
Q ss_pred EeecCCCCCCCCCCCCcEEecCCcccCCCce-eccccccccccccceeeEEEEeccCc---CeEEEEeCCeecCCCcc--
Q psy7042 453 YAQNEAGLSLPSSASNSVQIKDPMAAKAPEI-IVPLRNANAIQNHNAQFQCTITGCPK---PTISWLKGSREITPSAR-- 526 (2245)
Q Consensus 453 ~a~n~~g~~~~s~~~~~v~~~~~~~~~~p~~-~~~~~~~~~~~g~~~~l~C~~~g~p~---~~v~W~~~~~~i~~~~~-- 526 (2245)
....... . .+|.+ +..+....+.+|+++.|.|.+.|.++ +.|+| ++..+.....
T Consensus 237 ~~~~~~~-----------------~-~~p~v~~~~p~~~~~~~G~~v~L~C~~~g~~p~~~~~i~W--~~~~~~~~~~~~ 296 (475)
T 1iga_A 237 PPTPSPS-----------------C-CHPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW--TPSSGKSAVQGP 296 (475)
T ss_pred cccCCCC-----------------C-CCcEEEEcCCChHHhccCCceEEEEEEEcccCCCceEEEE--CCCCcCCccccC
Confidence 0000000 0 11222 22233334679999999999998754 69999 4444332211
Q ss_pred EEEEeeC---CeEEEEEecccccCCceEEEEEEeCCCCCCcceeEeE---ecCCCCCCCCCcccceEeeCCCeEEEEEee
Q psy7042 527 HHIFAEG---DTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII---MTAPKFNVPPRFRDTAYFDKGENVVVKIPF 600 (2245)
Q Consensus 527 ~~~~~~~---~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v---~~~p~~~~~p~~~~~~~~~~g~~~~l~C~~ 600 (2245)
.....+| ....|.|.++..+|+|.|+|.|.|..|.......|.+ ..+|.+...+.. ...+..|+.++|.|.+
T Consensus 297 ~~~~~~g~~~~~~~L~I~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~P~v~~~~~~--~~~v~~g~~~~L~C~~ 374 (475)
T 1iga_A 297 PERDLCGCYSVSSVLPGCAEPWNHGKTFTCTAAYPESKTPLTATLSKSGNTFRPEVHLLPPP--SEELALNELVTLTCLA 374 (475)
T ss_pred ceECCCCCEEEEEEEEEchHHhccCCcEEEEEEcCCCCCceEEEeecCCCCCCCeEEEECCC--hHHhccCCceEEEEEE
Confidence 1111112 2337999999999999999999999988655555532 445554332221 1125679999999999
Q ss_pred eecCC--CeEEEEeCCeEeeccCeEEE--Eec----C----CeEEEEEcCCCCCcCEEEEEEEEeCCCCc
Q psy7042 601 TGYPK--PKITWYRDNEVIESGGHFHV--ETS----E----RHAILTIRDASNVDTAPYRVVAENDLGMD 658 (2245)
Q Consensus 601 ~g~p~--~~i~W~~~~~~~~~~~~~~~--~~~----~----~~~~l~i~~~~~~d~g~y~C~a~n~~g~~ 658 (2245)
.|.++ +.|+|+|+|..+........ ... + ....|.|......|.|.|+|.|.|.....
T Consensus 375 ~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~~~g~YtC~a~n~~l~~ 444 (475)
T 1iga_A 375 RGFSPKDVLVRWLQGSQELPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEALPL 444 (475)
T ss_pred eeeECCCCEEEEEECCEECCCCceeecccccccCCCCCcEEEEEEEEEChHHhcCCCEEEEEEEcCCCCC
Confidence 98633 59999999998865531111 111 1 12467788888888999999999987643
No 61
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=99.95 E-value=1.3e-25 Score=281.66 Aligned_cols=353 Identities=19% Similarity=0.246 Sum_probs=263.5
Q ss_pred CCCCCCCCeeeeecCC-cEEEEeeCCCCCCCcccccEEEEeeeCCC---CCeEEEceeeeeeEEEecCCCCCEEEEEEEE
Q psy7042 669 RPDPPQFPTVEDIGHD-SLALVWRAPIWDGGSNITNYIVEKREHPM---SSWIRVGNTRFTTMAITGLSPGHQYEFRVYA 744 (2245)
Q Consensus 669 ~P~~p~~~~~~~~~~~-si~lsW~~p~~~~~~~~~~y~v~~~~~~~---~~w~~~~~~~~~~~~i~~L~p~t~y~~~v~a 744 (2245)
|+.+|.++.+...+.+ ++.|+|++|.. +.+.+|.|+++.... ..|.........++.+.+|.|++.|.|+|.|
T Consensus 2 P~~~P~~l~~~~~~~~~sv~l~W~~~~~---~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a 78 (375)
T 3t1w_A 2 PLSPPTNLHLEANPDTGVLTVSWERSTT---PDITGYRITTTPTNGQQGNSLEEVVHADQSSCTFDNLSPGLEYNVSVYT 78 (375)
T ss_dssp CCCCCEEEEEEEETTTTEEEEEEECCSC---SSCCEEEEEEEETTCTTSCCEEEEEETTCCEEEECCCCTTCCEEEEEEE
T ss_pred CCCCCCccEEEecCCCeEEEEEEeCCCC---CCeeeEEEEEEECCCCCCcceeEEcCCCccEEEEcCCcCCCEEEEEEEE
Confidence 6789999999999999 99999997632 368899999988543 2344434445678999999999999999999
Q ss_pred EecccCCCCCCCCccEEecCccccccccccccccCCCceeecccccccccCCceEEEEeeeccCccccccccceeccccc
Q psy7042 745 ENVYGRSDPSTTSDLITTKDTFKKQIKKRQYDFDETGKKIRGKADEKVSDYDQYVFDIYSKYVPQPVDIKTSSVYDHYDI 824 (2245)
Q Consensus 745 ~n~~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 824 (2245)
.|..|.+.+.. .
T Consensus 79 ~~~~g~s~~~~---~----------------------------------------------------------------- 90 (375)
T 3t1w_A 79 VKDDKESVPIS---D----------------------------------------------------------------- 90 (375)
T ss_dssp EETTEECCCEE---E-----------------------------------------------------------------
T ss_pred EcCCCCCCcEE---e-----------------------------------------------------------------
Confidence 99877543321 0
Q ss_pred ccccccCceeEEEEeeecccCCeeEEEeeccCCchhhhhhheeeeeeeccCCCceEeecccccCCcceEEEEEEecCCCC
Q psy7042 825 LEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFEVLDRPHP 904 (2245)
Q Consensus 825 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ 904 (2245)
.+..++| +
T Consensus 91 -----------------------------------------------------------------------~~~~~~p-~ 98 (375)
T 3t1w_A 91 -----------------------------------------------------------------------TIIPEVP-Q 98 (375)
T ss_dssp -----------------------------------------------------------------------EECCCCC-C
T ss_pred -----------------------------------------------------------------------eEcCCCC-C
Confidence 0011344 4
Q ss_pred CcccEEeeeeCceEEEEecCCCCCCCCccceEEEeeeecCCCc-eEEecceeeeceEEEecCCCCceeeEEEEEEecccc
Q psy7042 905 PENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTV-WTKVSSYVTTPFVRVRNLAIGSTYEFRVMAENQYGL 983 (2245)
Q Consensus 905 p~~l~~~~~~~~~~~l~W~~p~~~~g~~i~~y~i~~~~~~~~~-~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~ 983 (2245)
|.++.+...+.+++.|+|+++. + ..+.+|.|++...+... +...........+.+.+|.|++.|.|+|+|.|..|.
T Consensus 99 p~~l~~~~~~~~si~l~W~~~~--~-~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~ 175 (375)
T 3t1w_A 99 LTDLSFVDITDSSIGLRWTPLN--S-STIIGYRITVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVITLINGGE 175 (375)
T ss_dssp CSCCEEECCCSSEEEEECCCCC--C-TTEEEEEEEEEESSSCCSCEEEEECTTCCEEEEECCCTTCEEEEEEEEEETTEE
T ss_pred CceEEEEecCCCeEEEEEECCC--C-CCceEEEEEEEECCCCCceeEEEcCCCcceEEEeCCCCCCEEEEEEEEEeCCcc
Confidence 8899999999999999999874 2 38999999998755442 334444556778999999999999999999999998
Q ss_pred CCCccccCcccccCCCCCCCCCCCCeeEeecCCeEEEEecCCCCCCCCccceEEEEEEecCCc-cceeccccccCCccee
Q psy7042 984 SKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDD-KWIKASMAHIPDTSLK 1062 (2245)
Q Consensus 984 ~~~s~~~~~~~~~t~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~-~~~~~~~~~~~~~~~~ 1062 (2245)
+.++. ....+ .|.+|.++.+...+.+++.|+|.+|. ++.+.+|.|+|+..+.. .|...... ....
T Consensus 176 s~~s~----~~~~t---~~~~p~~l~~~~~~~~si~l~W~~p~---~~~i~~Y~v~~~~~~~~~~~~~~~~~---~~~~- 241 (375)
T 3t1w_A 176 SAPTT----LTQQT---AVPPPTDLRFTNIGPDTMRVTWAPPP---SIDLTNFLVRYSPVKNEEDVAELSIS---PSDN- 241 (375)
T ss_dssp CCCEE----EEEEC---CCCCCEEEEEESCCSSCEEEEEECCS---SCCCCEEEEEEEEGGGTTCCEEEEEC---TTCC-
T ss_pred cCCee----eeeec---CCCCCceeEEEecccCEEEEEEcCCC---CCCccEEEEEEEeCCCCCCcEEEEcC---CCcC-
Confidence 87763 22222 34588899998899999999999975 24589999999876532 23222111 1111
Q ss_pred EEEEeecccccCCccCchhhhhhhhhcccccccccccCCcEEEEEEEEEecCCCCCCCCCCcceeecCCCCCCccccCCC
Q psy7042 1063 YVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSDIIMCCAPPCAPKITSDLS 1142 (2245)
Q Consensus 1063 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~v~A~n~~G~~~~s~~~~~~~~~~~p~~p~~~~~~~ 1142 (2245)
.+++.+|.+++.|.|+|+|.|..|.+.++. ..
T Consensus 242 -----------------------------~~~i~~L~p~t~Y~~~V~A~~~~g~s~~~~----~~--------------- 273 (375)
T 3t1w_A 242 -----------------------------AVVLTNLLPGTEYVVSVSSVYEQHESTPLR----GR--------------- 273 (375)
T ss_dssp -----------------------------EEEECSCCTTCEEEEEEEEEETTEECCCEE----EE---------------
T ss_pred -----------------------------EEEeCCCCCCCEEEEEEEEEcCCCcCCcee----eE---------------
Confidence 126999999999999999999887653210 00
Q ss_pred ceeEEEEcCCeEEEEEEeeecCCCcceEEeCCeecCCCCcEEEEEccceEEEEecCccccccceeEEEEEEcCCcceeEE
Q psy7042 1143 IRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSAS 1222 (2245)
Q Consensus 1143 ~~~~~v~~~~~~~l~~~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~a~n~~g~~~~s 1222 (2245)
T Consensus 274 -------------------------------------------------------------------------------- 273 (375)
T 3t1w_A 274 -------------------------------------------------------------------------------- 273 (375)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEEECCCCCCCCCceeeeccCCcEEEEecCCCCCCCcceeeeEEEEeeccc-cceEEcccceecceEEecCCCCCceE
Q psy7042 1223 CKVYVVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESAT-GFWSKLSSFVRSPAYDVFGLETNRQY 1301 (2245)
Q Consensus 1223 ~~~~v~~~p~~p~~~~~~~~~~~~s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~-~~~~~~~~~~~~~~~~l~~L~~~t~Y 1301 (2245)
+.+.|.+| .++.+...+.+++.|+|++|. ..+.+|.|+|..... +.+.........+++.+.+|.+++.|
T Consensus 274 ----~~t~p~~P-~~l~~~~~~~~sv~l~W~~p~----~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y 344 (375)
T 3t1w_A 274 ----QKTGLDSP-TGIDFSDITANSFTVHWIAPR----ATITGYRIRHHPEHFSGRPREDRVPHSRNSITLTNLTPGTEY 344 (375)
T ss_dssp ----EECCCCCC-EEEEEESCCSSCEEEEEECCS----SCCSEEEEEEEETTCCSSCEEEEEETTCCEEEECSCCTTCEE
T ss_pred ----EecCCCCC-CccEeeeccCCEEEEEECCCC----cceeeEEEEEEECCCCCcceeEEcCCCccEEEECCCCCCCEE
Confidence 00122222 346666777889999999873 338999999887755 55656656677889999999999999
Q ss_pred EEEEEEeccccCCCCcc
Q psy7042 1302 RFRVRAENQYGVSEPLE 1318 (2245)
Q Consensus 1302 ~~~v~A~n~~G~~~~s~ 1318 (2245)
.|+|+|.|..|.|+|..
T Consensus 345 ~~~V~A~~~~G~s~p~s 361 (375)
T 3t1w_A 345 VVSIVALNGREESPLLI 361 (375)
T ss_dssp EEEEEEEETTEECCCEE
T ss_pred EEEEEEECCCCCCCcee
Confidence 99999999999998754
No 62
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.95 E-value=6.8e-27 Score=281.53 Aligned_cols=269 Identities=19% Similarity=0.221 Sum_probs=207.9
Q ss_pred CCCCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECCeeccCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEEc
Q psy7042 88 GEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYN 167 (2245)
Q Consensus 88 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 167 (2245)
..+|.|...+....+.+|+.++|.|.+.| .|.|+|+|..+ +.....+ ..|.|.+++.+|+|.|+|.|.|
T Consensus 10 ~~~P~i~~~~~~~~v~~G~~v~l~C~~~~----~i~W~~~~~~~-----~~~~~~~--~~L~i~~~~~~d~G~Y~C~~~n 78 (290)
T 2o26_X 10 PSPPSIHPAQSELIVEAGDTLSLTCIDPD----FVRWTFKTYFN-----EMVENKK--NEWIQEKAEATRTGTYTCSNSN 78 (290)
T ss_dssp --CCEESSCSSEEEEETTSCEEEEEECTT----EEEEEEECSSS-----CEEEECS--SEEEETTCCGGGCEEEEEEESS
T ss_pred CCCCEEeCCCCeEEEcCCCcEEEEECCCC----cEEEecCCcce-----eeecCCC--ceEEEeccCHHhCeEEEEEeeC
Confidence 46899998899999999999999999987 79999999877 1122333 3699999999999999999999
Q ss_pred CcccceeEEEEEecCCCeeecCCCceEEcCCCeEEEEEEEecCCC-ceEEE-eeCceeeecCCceEEEEeCCeEEEEEcc
Q psy7042 168 SVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQP-MEVSL-TKNGRVVQSDDRFKFTVLDDYIIIFIKE 245 (2245)
Q Consensus 168 ~~g~~~~~~~l~V~~~P~~~~~~~~~~v~~G~~~~l~C~~~g~p~-~~i~W-~~~g~~l~~~~~~~~~~~~~~~~L~i~~ 245 (2245)
|. ..++.|.|..+|.+...+....+.+|+.+.|.|.+.+ |. +.++| ++||..+..+.++.+... ..|.|.+
T Consensus 79 --g~-~~~~~l~V~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~~~~~~~~~~~---~~L~i~~ 151 (290)
T 2o26_X 79 --GL-TSSIYVFVRDPAKLFLVGLPLFGKEDSDALVRCPLTD-PQVSQYSLIECDGKSLPTDLTFVPNPK---AGITIKN 151 (290)
T ss_dssp --SC-EEEEEEEEECSSCCBCCCCCEEEETTSCEEECCCBSC-CSCEEEEEEETTSCCCCTTCEEEEETT---TEEEEES
T ss_pred --Cc-cEEEEEEEeCCCcccccccceEEecCCeEEEeCcCCC-CCCceEEEEeCCCcCCCCCCceeeCCC---CCEEEec
Confidence 54 7788899999888777788899999999999999996 77 99999 578988876655544332 2699999
Q ss_pred cCccCce-eEEEEEEcCCcceE-EEEEEEEecCCCCCCCCcccceeeccceEEEecCCCCCCCceeEEEEEEEEecCCCc
Q psy7042 246 IRKEDAG-DYTVNLSNSSGSVS-GTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPH 323 (2245)
Q Consensus 246 ~~~~d~G-~Y~C~a~n~~g~~~-~~~~l~V~~~p~~~~~~~~~~~~~~~s~~~~w~pp~~~~~~~~~~~~~~~~~~~~~~ 323 (2245)
+..+|+| .|+|.|.|..+... ..+.|.|...+
T Consensus 152 v~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~---------------------------------------------- 185 (290)
T 2o26_X 152 VKRAYHRLCVRCAAQRDGTWLHSDKFTLKVREAI---------------------------------------------- 185 (290)
T ss_dssp CCGGGTTCEEEEEEEETTEEEECCCEEEEEECCC----------------------------------------------
T ss_pred ccHHHCCCEEEEEEEECCceEEeEEEEEEEEeCC----------------------------------------------
Confidence 9999999 99999999855432 24555543211
Q ss_pred eEEeeeccCcceEEEcCCCCCCEEEEEEEEEecCCCCCCCCCCCceecCCCCCCCCCCCCcEEEeecCCeeEEEecCCCC
Q psy7042 324 WICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLD 403 (2245)
Q Consensus 324 ~~~~~~~~~~~~~~i~~l~~~~~~~~~c~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~v~~~~~~~~~l~W~~~~~ 403 (2245)
T Consensus 186 -------------------------------------------------------------------------------- 185 (290)
T 2o26_X 186 -------------------------------------------------------------------------------- 185 (290)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCccEEEEEeeecCCCCcEEEeeeecCCceeecCCcccCceEEEEEEeecCCCCCCCCCCCCcEEecCCcccCCCce
Q psy7042 404 DGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEI 483 (2245)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~s~~~~~v~~~~~~~~~~p~~ 483 (2245)
..+|.|
T Consensus 186 --------------------------------------------------------------------------~~~P~i 191 (290)
T 2o26_X 186 --------------------------------------------------------------------------KAIPVV 191 (290)
T ss_dssp --------------------------------------------------------------------------CSCCEE
T ss_pred --------------------------------------------------------------------------CCCCcc
Confidence 023444
Q ss_pred eccccccccccccceeeEEEEeccCcCe-EEEEeCCeec----CCCccEEEE---eeCCeEEEEEecccccCCceEEEEE
Q psy7042 484 IVPLRNANAIQNHNAQFQCTITGCPKPT-ISWLKGSREI----TPSARHHIF---AEGDTYTLIINSVYGVDADEYVCRA 555 (2245)
Q Consensus 484 ~~~~~~~~~~~g~~~~l~C~~~g~p~~~-v~W~~~~~~i----~~~~~~~~~---~~~~~~~L~i~~v~~~d~G~Y~C~a 555 (2245)
...+.+..+.+|+.+.|.|.+.|.|.+. +.|++++..+ ......... .......|.|.++..+|+|.|+|.|
T Consensus 192 ~~~~~~~~v~~G~~v~l~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a 271 (290)
T 2o26_X 192 SVPETSHLLKKGDTFTVVCTIKDVSTSVNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYA 271 (290)
T ss_dssp ECSCSBCCCCTTCCEEEEEEEEESSTTCEEEEEEESSSEEECCCEECCEEEEETTEEEEEEEEEESSCCSSSCEEEEEEE
T ss_pred ccCCCcceEecCCcEEEEEEEecCCcceeEEEecCCCCCccceeecccccccCceeeEEEEEEEEcCCCcccCeEEEEEE
Confidence 4444556778999999999999999986 9999999873 322222222 1122448999999999999999999
Q ss_pred EeCCCCCCcceeEeEecCC
Q psy7042 556 VNKGGVKSTKAELIIMTAP 574 (2245)
Q Consensus 556 ~n~~g~~~~~~~l~v~~~p 574 (2245)
.|..|.....+.|.|..+|
T Consensus 272 ~N~~g~~~~~~~l~V~~~P 290 (290)
T 2o26_X 272 NNTFGSANVTTTLKVVEKG 290 (290)
T ss_dssp ECSSCEEEEEEEECC----
T ss_pred eCCCCcEEEEEEEEEEeCC
Confidence 9999999888898887654
No 63
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.95 E-value=1.9e-28 Score=313.72 Aligned_cols=362 Identities=12% Similarity=0.165 Sum_probs=235.0
Q ss_pred CCcceEEeCCCeEEEEEEEeeec--CCceEEEECC--eecc-----------------CCCeEEEEEc--CcEEEEEEee
Q psy7042 96 PLKDLVVPLGKLLTLQCEATGTP--VPKCRWLRNG--REIS-----------------SGARYRVETA--GGVFRLHFNE 152 (2245)
Q Consensus 96 ~~~~~~v~~G~~v~L~C~~~g~p--~~~i~W~~~g--~~l~-----------------~~~~~~~~~~--~~~~~L~i~~ 152 (2245)
.+..+.+.+|++++|.|.+.+.+ .+.|.|+|++ ..+. ..+|+.+..+ ++..+|.|.+
T Consensus 5 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 84 (434)
T 1igy_B 5 ESGAELARPGASVKMSCKASGYTFTTYTIHWIKQRPGQGLEWIGYINPSSVYTNYNQRFKDKATLTRDRSSNTANIHLSS 84 (434)
T ss_dssp CCCCCEECTBCCEEECCEECSSCGGGCCCEEEEECTTCCEEEEEECCSSSCCCCCCGGGTTTEECCBCGGGCBBCEEECS
T ss_pred CCCCeEecCCCCEEEEEEccCCcccCceEEEEEECCCCCCEEEEEEccCCCceecCccccccEEEEEECCCCEEEEEECC
Confidence 34557899999999999998764 6789999963 2210 1346666543 3445799999
Q ss_pred eccCCCeEEEEEEEcCcccceeEEEEEecC----CCeeecCCCceEEcCCCeEEEEEEEecC-CCc-eEEEeeCceeeec
Q psy7042 153 VTDVDNGDYTCEAYNSVGFAHTSSRVKIGT----PPRIDRMPNALYIPEGDNTKVKIFYAGD-QPM-EVSLTKNGRVVQS 226 (2245)
Q Consensus 153 ~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~----~P~~~~~~~~~~v~~G~~~~l~C~~~g~-p~~-~i~W~~~g~~l~~ 226 (2245)
++.+|+|.|+|.|.|..+.....+.|.|.. +|.+...+....+.+|+.++|.|.+.|. |.+ .|.|+|+|..+..
T Consensus 85 v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~G~~v~L~C~~~g~~P~p~~v~W~k~~~~~~~ 164 (434)
T 1igy_B 85 LTSDDSAVYYCVREGEVPYWGQGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGV 164 (434)
T ss_dssp BCGGGCSEECCCCSSSSCCCCCCEECEECCSCCBCCCEEEECCCCCCCCTTEEEEEEEEEEEBSSCCEEEETTTTBCSSE
T ss_pred CChHHCEEEEEEEEccccccCCceEEEEccCCCCCCeEEEcCCccccCCCCcEEEEEEEeeecCCCeEEEEeeCCcCCCe
Confidence 999999999999999655555567788863 4555443333446899999999999885 766 9999999875311
Q ss_pred --------CCceEEEEeCCeEEEEEcccCccCceeEEEEEEcCCcceEEEEEEEEecCCCCCCCCcccceeeccceEEEe
Q psy7042 227 --------DDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHW 298 (2245)
Q Consensus 227 --------~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~s~~~~w 298 (2245)
...+.. ...|.|.++..+| |.|+|.|.|..|.......+.+..+
T Consensus 165 ~~~~~~~~~~~~~~-----~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~~~~~~~---------------------- 216 (434)
T 1igy_B 165 HTFPAVLQSDLYTL-----SSSVTVPSSPRPS-ETVTCNVAHPASSTKVDKKIVPRDC---------------------- 216 (434)
T ss_dssp EECCCEECSSCEEE-----EEEEEEETTTTTS-SCCEEEEECTTTTCCEEEECCCCCC----------------------
T ss_pred EecCceecCCcEEE-----EEEEEEcchhcCC-CcEEEEEEeCCCCccceeeccCCCC----------------------
Confidence 111111 2469999999889 9999999998876433332221100
Q ss_pred cCCCCCCCceeEEEEEEEEecCCCceEEeeeccCcceEEEcCCCCCCEEEEEEEEEecCCCCCCCCCCCceecCCCCCCC
Q psy7042 299 NPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKP 378 (2245)
Q Consensus 299 ~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~c~a~n~~g~~~~~~~~~~~~~~~~~~~p 378 (2245)
.|.+
T Consensus 217 ---------------------------------------------------~~~v------------------------- 220 (434)
T 1igy_B 217 ---------------------------------------------------GCKP------------------------- 220 (434)
T ss_dssp ---------------------------------------------------CCCC-------------------------
T ss_pred ---------------------------------------------------CCcc-------------------------
Confidence 0000
Q ss_pred CCCCCcEEEeecCCeeEEEecCCCCCCCCCccEEEEEeeecCCCCcEEEeeeecCCceeecCCcccCceEEEEEEeecCC
Q psy7042 379 SPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEA 458 (2245)
Q Consensus 379 ~~~~~~~v~~~~~~~~~l~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~ 458 (2245)
..|.
T Consensus 221 -----------------------------------------------------------------------~~~~----- 224 (434)
T 1igy_B 221 -----------------------------------------------------------------------CICT----- 224 (434)
T ss_dssp -----------------------------------------------------------------------CCCC-----
T ss_pred -----------------------------------------------------------------------ccCC-----
Confidence 0000
Q ss_pred CCCCCCCCCCcEEecCCcccCCCceeccccccc-cccccceeeEEEEeccC----cCeEEEEeCCeecCCCccEEE--Ee
Q psy7042 459 GLSLPSSASNSVQIKDPMAAKAPEIIVPLRNAN-AIQNHNAQFQCTITGCP----KPTISWLKGSREITPSARHHI--FA 531 (2245)
Q Consensus 459 g~~~~s~~~~~v~~~~~~~~~~p~~~~~~~~~~-~~~g~~~~l~C~~~g~p----~~~v~W~~~~~~i~~~~~~~~--~~ 531 (2245)
. ...|+.++.++.... +.+|+.+.|.|.+.|.+ .+.|+|+|++..+........ ..
T Consensus 225 -------~----------~~~p~v~~~~p~~~~~v~~G~~~~L~C~~~g~~p~P~~~~i~W~k~~~~~~~~~~~~~~~~~ 287 (434)
T 1igy_B 225 -------V----------PEVSSVFIFPPKPKDTLLITVTPKVTCVVVDISKDDPEVQFSWFVDNVEVHTAQTQPREEQF 287 (434)
T ss_dssp -------C----------SSSCCEEEECCCHHHHHSTTSCCEEEEEECCCCSSCCCCCBCBBSSSCCBCCCSCCCCCCCC
T ss_pred -------C----------CcCcEEEEeCCChHHhcccCCCcEEEEEEeccccCCCCeEEEEEeCCcccCCcccCcceeCC
Confidence 0 000111111122122 78899999999999974 458999999987754321111 11
Q ss_pred eC---CeEEEEEecccccCCceEEEEEEeCCCCCCcceeE----eEecCCCCCCCCCcccceEeeCCCeEEEEEeeeecC
Q psy7042 532 EG---DTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAEL----IIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYP 604 (2245)
Q Consensus 532 ~~---~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l----~v~~~p~~~~~p~~~~~~~~~~g~~~~l~C~~~g~p 604 (2245)
++ ....|.|.++..+|+|.|+|.|.|..|.......+ .+..+|.+...+.... ...|+.++|.|.+.|.+
T Consensus 288 ~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~---~~~~~~~~L~C~~~g~~ 364 (434)
T 1igy_B 288 NSTFRVVSALPIMHQDWLNGKEFKCRVNSAAFPAPIEKTISKTKGKPRAPQVYTIPPPKE---QMAKDKVSLTCMITDFF 364 (434)
T ss_dssp SSSCCCCCCEECCHHHHHHTCCCBCCBCCSSCSSCCCCCCCCCCSCCBCCCCEEECCCSS---SSSSSEEEEEEEEEEEB
T ss_pred CCcEEEEEEEEECHHHccCCCcEEEEEECCCCCCceeEEEeccCCCCcCCEEEEECCCHH---HhcCCcEEEEEEEEeeE
Confidence 11 12369999999999999999999998876433333 3345555533222111 23477899999999864
Q ss_pred C--CeEEEEeCCeEeeccCeEEE--EecCC---eEEEEEcCCCCCcCEEEEEEEEeCCCC
Q psy7042 605 K--PKITWYRDNEVIESGGHFHV--ETSER---HAILTIRDASNVDTAPYRVVAENDLGM 657 (2245)
Q Consensus 605 ~--~~i~W~~~~~~~~~~~~~~~--~~~~~---~~~l~i~~~~~~d~g~y~C~a~n~~g~ 657 (2245)
+ +.|+|+|+|..+........ ...+. ...|.|.....+|.|.|+|.|.|....
T Consensus 365 P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~ 424 (434)
T 1igy_B 365 PEDITVEWQSDGQAPENYKNTQPIMDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGLH 424 (434)
T ss_dssp CSCEEEEEEETTSCCSCCEECCCCCCSSSCEEEEEEEEEEHHHHHTTCCEEEEEEETTSG
T ss_pred CCCeEEEEEECCEecCCceeccceeCCCCcEEEEEEEEECchhccCCCEEEEEEEcCCCC
Confidence 3 38999999988743221111 11111 245677777777899999999998764
No 64
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.95 E-value=1.1e-26 Score=283.91 Aligned_cols=284 Identities=20% Similarity=0.300 Sum_probs=216.0
Q ss_pred ceEEeCCCeEEEEEEEe-eecCCceEEEECCeeccCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEEcCcccceeEEE
Q psy7042 99 DLVVPLGKLLTLQCEAT-GTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSR 177 (2245)
Q Consensus 99 ~~~v~~G~~v~L~C~~~-g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 177 (2245)
.+.+.+|+.++|.|... +.|.+.|.|+|+|..+..+.++.+...++...|.|.+++.+|+|.|+|.|.|..|... ++.
T Consensus 10 ~~~v~eg~~v~l~~~~~~~~p~~~v~W~k~~~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~-s~~ 88 (312)
T 2y23_A 10 VVNVDDDGVISLNFECDKMTPKSEFSWSKDYVSTEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIAS-SYL 88 (312)
T ss_dssp EEEECTTCCEEEEEECSSCCTTCCEEEEETTEECTTCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCCE-EEE
T ss_pred eEEEecCCeEEEEEEEeCCCCCcEEEEEECCEECCCCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcEE-EEE
Confidence 46788999999999885 6799999999999999988899999888888999999999999999999999988554 666
Q ss_pred EEecC------------CCeeecCCC-ceEEcCCCeEEEEEEEe-cCCCceEEEeeCceeeecCCceEEEEe--CCeEEE
Q psy7042 178 VKIGT------------PPRIDRMPN-ALYIPEGDNTKVKIFYA-GDQPMEVSLTKNGRVVQSDDRFKFTVL--DDYIII 241 (2245)
Q Consensus 178 l~V~~------------~P~~~~~~~-~~~v~~G~~~~l~C~~~-g~p~~~i~W~~~g~~l~~~~~~~~~~~--~~~~~L 241 (2245)
|.|.. +|.+...+. ...+.+|+.+.|.|.+. +.|.+.++|+|+|..+....++.+... .....|
T Consensus 89 l~v~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~L 168 (312)
T 2y23_A 89 IDEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEM 168 (312)
T ss_dssp ECHHHHHHHHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSSSCEEEEETTTTEEEE
T ss_pred EEEeeeeeeecccccCCCCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCCcEEEEEccCCCEEEE
Confidence 77753 666554443 78899999999999998 899999999999999998887777655 455679
Q ss_pred EEcccCccCceeEEEEEEcCCcceEEEEEEEEecCCCCCCCCcccceeeccceEEEecCCCCCCCceeEEEEEEEEecCC
Q psy7042 242 FIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISM 321 (2245)
Q Consensus 242 ~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~s~~~~w~pp~~~~~~~~~~~~~~~~~~~~ 321 (2245)
.|.++..+|+|.|+|.|.|..+. ....+.+....... +
T Consensus 169 ~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~~~~~~~~~~-----~----------------------------------- 206 (312)
T 2y23_A 169 FMEKLQDEDEGTYTFQLQDGKAT--NHSTVVLVGDVFKK-----L----------------------------------- 206 (312)
T ss_dssp EESCCCGGGCEEEEEEEESSSCE--EEEEEEECTHHHHH-----H-----------------------------------
T ss_pred EEccCCcccCEeEEEEEEeCCce--EEEEEEEcchhhhh-----h-----------------------------------
Confidence 99999999999999999864332 22222221100000 0
Q ss_pred CceEEeeeccCcceEEEcCCCCCCEEEEEEEEEecCCCCCCCCCCCceecCCCCCCCCCCCCcEEEeecCCeeEEEecCC
Q psy7042 322 PHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKP 401 (2245)
Q Consensus 322 ~~~~~~~~~~~~~~~~i~~l~~~~~~~~~c~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~v~~~~~~~~~l~W~~~ 401 (2245)
T Consensus 207 -------------------------------------------------------------------------------- 206 (312)
T 2y23_A 207 -------------------------------------------------------------------------------- 206 (312)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCccEEEEEeeecCCCCcEEEeeeecCCceeecCCcccCceEEEEEEeecCCCCCCCCCCCCcEEecCCcccCCC
Q psy7042 402 LDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAP 481 (2245)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~s~~~~~v~~~~~~~~~~p 481 (2245)
+... .+.........+|
T Consensus 207 -----------------------------------~~~~----------------------------~~~~~~~~~~~~p 223 (312)
T 2y23_A 207 -----------------------------------QKEA----------------------------EFQRQEWIRKQGP 223 (312)
T ss_dssp -----------------------------------HHHH----------------------------HHHHHHHHHHHSS
T ss_pred -----------------------------------cccc----------------------------cccccchhhccCC
Confidence 0000 0000000001234
Q ss_pred ceeccccccccccccceeeEEEEeccCcC-eEEEEeCCeecCCCccEEEEeeCCeEEEEEecccccCCceEEEEEEeCCC
Q psy7042 482 EIIVPLRNANAIQNHNAQFQCTITGCPKP-TISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGG 560 (2245)
Q Consensus 482 ~~~~~~~~~~~~~g~~~~l~C~~~g~p~~-~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g 560 (2245)
.|...+. ..+.+|+.+.|.|.+.|.|.+ .+.|+|++..+..+.++.+. ++...|.|.++..+|+|.|+|.|.|..|
T Consensus 224 ~~~~~~~-~~v~~G~~~~l~C~~~~~p~~~~v~W~~~g~~~~~~~~~~~~--~~~~~L~I~~v~~~d~G~Y~C~a~N~~G 300 (312)
T 2y23_A 224 HFVEYLS-WEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFK--DGICTLLITEFSKKDAGIYEVILKDDRG 300 (312)
T ss_dssp EEEEEEE-EEEETTTEEEEEEEEESCCSSCEEEEEETTEEEEEECCC------CEEEEEECSCSGGGCEEEEEEEESTTC
T ss_pred ceeecce-EEEeCCCEEEEEEEEcCCCCCCEEEEeeCCEECCCCCcEEEE--CCEEEEEECcCCHHHCEEEEEEEEcCCC
Confidence 4443333 567899999999999999988 99999999998866665554 4456999999999999999999999999
Q ss_pred CCCcceeEeEe
Q psy7042 561 VKSTKAELIIM 571 (2245)
Q Consensus 561 ~~~~~~~l~v~ 571 (2245)
....++.|++.
T Consensus 301 ~~~~~~~l~i~ 311 (312)
T 2y23_A 301 KDKSRLKLVDE 311 (312)
T ss_dssp CEEEEEEECSC
T ss_pred ceeeeeEEEec
Confidence 99888888764
No 65
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.94 E-value=6.2e-26 Score=277.28 Aligned_cols=284 Identities=20% Similarity=0.311 Sum_probs=216.5
Q ss_pred ceEEcCCCeEEEEEEec-CcCCCeEEEeeCCEeccCCceEEEEecCcEEEEEEeeeccCCCeEEEEEEecCceeeEEEEE
Q psy7042 1706 DLVVPLGKLLTLQCEAT-GTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSR 1784 (2245)
Q Consensus 1706 ~~~~~~G~~v~L~C~~~-~~p~~~v~W~~~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~ 1784 (2245)
.+.+.+|+.+.|.|... +.|.+.+.|+|++..+....++.+...++...|.|.+++.+|+|.|+|.+.|..|... +..
T Consensus 10 ~~~v~eg~~v~l~~~~~~~~p~~~v~W~k~~~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~-s~~ 88 (312)
T 2y23_A 10 VVNVDDDGVISLNFECDKMTPKSEFSWSKDYVSTEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIAS-SYL 88 (312)
T ss_dssp EEEECTTCCEEEEEECSSCCTTCCEEEEETTEECTTCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCCE-EEE
T ss_pred eEEEecCCeEEEEEEEeCCCCCcEEEEEECCEECCCCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcEE-EEE
Confidence 36788999999999884 6788999999999999988899988888888999999999999999999999888554 566
Q ss_pred EEecC------------CCccccCCC-ceEEcCCCeEEEEEEEe-ccCCcEEEEEECCEEeecCCceEEEEc--CCeEEE
Q psy7042 1785 VKIGT------------PPRIDRMPN-ALYIPEGDNTKVKIFYA-GDQPMEVSLTKNGRVVQSDDRFKFTVL--DDYIII 1848 (2245)
Q Consensus 1785 l~V~~------------~p~~~~~~~-~~~~~~g~~~~l~C~~~-~~p~~~v~W~~~g~~l~~~~~~~~~~~--~~~~~l 1848 (2245)
|.|.. +|.+...+. ...+.+|+.+.|.|.+. +.|.+.+.|+++|..+....++.+... .....|
T Consensus 89 l~v~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~L 168 (312)
T 2y23_A 89 IDEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEM 168 (312)
T ss_dssp ECHHHHHHHHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSSSCEEEEETTTTEEEE
T ss_pred EEEeeeeeeecccccCCCCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCCcEEEEEccCCCEEEE
Confidence 77653 555544333 77889999999999999 889999999999999988777766654 455779
Q ss_pred EEcccCcccceEEEEEEEcCCeeeEEEEEEEEeCCCCCCCCCceecccccceEEEEecCCCCCCCeeeeEEEEEEEcCCC
Q psy7042 1849 FIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISM 1928 (2245)
Q Consensus 1849 ~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~ 1928 (2245)
.|.++..+|+|.|+|.|.|..+.... .+.+..... . .
T Consensus 169 ~i~~~~~~d~G~Y~C~~~~~~~~~~~--~~~~~~~~~-----~---~--------------------------------- 205 (312)
T 2y23_A 169 FMEKLQDEDEGTYTFQLQDGKATNHS--TVVLVGDVF-----K---K--------------------------------- 205 (312)
T ss_dssp EESCCCGGGCEEEEEEEESSSCEEEE--EEEECTHHH-----H---H---------------------------------
T ss_pred EEccCCcccCEeEEEEEEeCCceEEE--EEEEcchhh-----h---h---------------------------------
Confidence 99999999999999999765433322 222210000 0 0
Q ss_pred CceEEEeeecCcceEEecCCCCCCeEEEEEEEECCCCCCCCCCCcCceeccCCCCCCCCCCCcEEEEEcCCeEEEEEecc
Q psy7042 1929 PHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKP 2008 (2245)
Q Consensus 1929 ~~~~~~~~~~~~~~~~i~~l~~~~~y~~~~~a~n~~g~~~~s~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~v~l~W~~p 2008 (2245)
.. ..+
T Consensus 206 -----------------------------------------------~~----------------------------~~~ 210 (312)
T 2y23_A 206 -----------------------------------------------LQ----------------------------KEA 210 (312)
T ss_dssp -----------------------------------------------HH----------------------------HHH
T ss_pred -----------------------------------------------hc----------------------------ccc
Confidence 00 000
Q ss_pred CCCCCCceeEEEEEEeeecCccceEEEEEEeccceEEeCCCcCCceEEEEEEEEeccccCCCcCCCCcccccCcccCCCc
Q psy7042 2009 LDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAP 2088 (2245)
Q Consensus 2009 ~~~~~~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~s~~v~~~~~~~~~~p 2088 (2245)
.+.........+|
T Consensus 211 -------------------------------------------------------------------~~~~~~~~~~~~p 223 (312)
T 2y23_A 211 -------------------------------------------------------------------EFQRQEWIRKQGP 223 (312)
T ss_dssp -------------------------------------------------------------------HHHHHHHHHHHSS
T ss_pred -------------------------------------------------------------------cccccchhhccCC
Confidence 0000000011236
Q ss_pred eEEeeccceeeecCccEEEEEEEEeeCCC-eEEEeeCCEeeCCCCcEEEEEeCcEEEEEEcCCCCCCCeEEEEEEEeCCc
Q psy7042 2089 EIIVPLRNANAIQNHNAQFQCTITGCPKP-TISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGG 2167 (2245)
Q Consensus 2089 ~~~~~~~~~~~~~g~~v~l~C~~~g~P~p-~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G 2167 (2245)
.|...+. ..+.+|+.++|.|.+.|.|.| .|.|+|+|..+..+.++.+. ++...|.|.++..+|+|.|+|.|.|.+|
T Consensus 224 ~~~~~~~-~~v~~G~~~~l~C~~~~~p~~~~v~W~~~g~~~~~~~~~~~~--~~~~~L~I~~v~~~d~G~Y~C~a~N~~G 300 (312)
T 2y23_A 224 HFVEYLS-WEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFK--DGICTLLITEFSKKDAGIYEVILKDDRG 300 (312)
T ss_dssp EEEEEEE-EEEETTTEEEEEEEEESCCSSCEEEEEETTEEEEEECCC------CEEEEEECSCSGGGCEEEEEEEESTTC
T ss_pred ceeecce-EEEeCCCEEEEEEEEcCCCCCCEEEEeeCCEECCCCCcEEEE--CCEEEEEECcCCHHHCEEEEEEEEcCCC
Confidence 6665444 678899999999999999998 99999999999877766655 3356899999999999999999999999
Q ss_pred eeeEEEEEEEE
Q psy7042 2168 VKSTKAELIIM 2178 (2245)
Q Consensus 2168 ~~~~~~~l~V~ 2178 (2245)
..++++.|.|+
T Consensus 301 ~~~~~~~l~i~ 311 (312)
T 2y23_A 301 KDKSRLKLVDE 311 (312)
T ss_dssp CEEEEEEECSC
T ss_pred ceeeeeEEEec
Confidence 99999998763
No 66
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.94 E-value=9.3e-28 Score=296.30 Aligned_cols=181 Identities=22% Similarity=0.393 Sum_probs=72.8
Q ss_pred CCceecCCcceEEeCCCeEEEEEEEeee-cCCceEEEECCeeccCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEEcC
Q psy7042 90 KPDFIVPLKDLVVPLGKLLTLQCEATGT-PVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNS 168 (2245)
Q Consensus 90 ~P~~~~~~~~~~v~~G~~v~L~C~~~g~-p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 168 (2245)
+|.+.. +....+.+|+.++|.|.+.+. |.+.|.|+|+|..+..+.++.+. + ..|.|.+++.+|+|.|+|.|.|.
T Consensus 9 ~p~~~~-~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~--~--~~L~i~~v~~~D~G~Y~C~a~n~ 83 (334)
T 1ry7_B 9 GPEPGQ-QEQLVFGSGDAVELSCPPPGGGPMGPTVWVKDGTGLVPSERVLVG--P--QRLQVLNASHEDSGAYSCRQRLT 83 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCC-cCcEEEecCCcEEEEeeCCCCCCCcceEEEECCeeCCCcccEEec--c--ceEEEeecccccCEEEEEEEEeC
Confidence 444444 778899999999999999886 67899999999999877776652 2 26999999999999999999999
Q ss_pred cccceeEEEEEecCC----------------------CeeecC----CCceEEcCCCeEEEEEEEecCCCceEEEeeCce
Q psy7042 169 VGFAHTSSRVKIGTP----------------------PRIDRM----PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGR 222 (2245)
Q Consensus 169 ~g~~~~~~~l~V~~~----------------------P~~~~~----~~~~~v~~G~~~~l~C~~~g~p~~~i~W~~~g~ 222 (2245)
|.....+.|.|..+ |.+... +....+.+|+.+.|.|.+.|.|.+.|.|+|+|.
T Consensus 84 -~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~ 162 (334)
T 1ry7_B 84 -QRVLCHFSVRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGR 162 (334)
T ss_dssp ------------------------------------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCCEEECCBTTB
T ss_pred -CeEEEEEEEEEeccCccccccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEccCCCCCeEEEEECCE
Confidence 87777888888754 333322 234678899999999999999999999999999
Q ss_pred eeecCCceE-EEEeCCeEEEEEcccCccCceeEEEEEEcCCcceEEEEEEEEecC
Q psy7042 223 VVQSDDRFK-FTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGL 276 (2245)
Q Consensus 223 ~l~~~~~~~-~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 276 (2245)
.+....++. +........|.|.++..+|+|.|+|.|.|..|.....+.|.|...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 217 (334)
T 1ry7_B 163 EFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLER 217 (334)
T ss_dssp CCCTTSSTTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECC
T ss_pred ECcccccccceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecC
Confidence 887654421 122234457999999999999999999999998888888888653
No 67
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.94 E-value=6.1e-26 Score=273.21 Aligned_cols=269 Identities=19% Similarity=0.232 Sum_probs=204.6
Q ss_pred CCCCceeccCCceEEcCCCeEEEEEEecCcCCCeEEEeeCCEeccCCceEEEEecCcEEEEEEeeeccCCCeEEEEEEec
Q psy7042 1695 GEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYN 1774 (2245)
Q Consensus 1695 ~~~p~~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n 1774 (2245)
..+|.|...+..+.+.+|++++|.|.+.+ .+.|++++..+ . .....+ ..|.|.+++.+|+|.|+|.+.|
T Consensus 10 ~~~P~i~~~~~~~~v~~G~~v~l~C~~~~----~i~W~~~~~~~----~-~~~~~~--~~L~i~~~~~~d~G~Y~C~~~n 78 (290)
T 2o26_X 10 PSPPSIHPAQSELIVEAGDTLSLTCIDPD----FVRWTFKTYFN----E-MVENKK--NEWIQEKAEATRTGTYTCSNSN 78 (290)
T ss_dssp --CCEESSCSSEEEEETTSCEEEEEECTT----EEEEEEECSSS----C-EEEECS--SEEEETTCCGGGCEEEEEEESS
T ss_pred CCCCEEeCCCCeEEEcCCCcEEEEECCCC----cEEEecCCcce----e-eecCCC--ceEEEeccCHHhCeEEEEEeeC
Confidence 45788887788899999999999999987 79999999877 1 112223 4599999999999999999999
Q ss_pred CceeeEEEEEEEecCCCccccCCCceEEcCCCeEEEEEEEeccCC-cEEEE-EECCEEeecCCceEEEEcCCeEEEEEcc
Q psy7042 1775 SVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQP-MEVSL-TKNGRVVQSDDRFKFTVLDDYIIIFIKE 1852 (2245)
Q Consensus 1775 ~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~-~~v~W-~~~g~~l~~~~~~~~~~~~~~~~l~i~~ 1852 (2245)
|. ...+.|.|..+|.+...+....+.+|+.+.|.|.+.+ |. +.+.| .+||+.+....++... .. ..|.|.+
T Consensus 79 --g~-~~~~~l~V~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~~~~~~~~~--~~-~~L~i~~ 151 (290)
T 2o26_X 79 --GL-TSSIYVFVRDPAKLFLVGLPLFGKEDSDALVRCPLTD-PQVSQYSLIECDGKSLPTDLTFVPN--PK-AGITIKN 151 (290)
T ss_dssp --SC-EEEEEEEEECSSCCBCCCCCEEEETTSCEEECCCBSC-CSCEEEEEEETTSCCCCTTCEEEEE--TT-TEEEEES
T ss_pred --Cc-cEEEEEEEeCCCcccccccceEEecCCeEEEeCcCCC-CCCceEEEEeCCCcCCCCCCceeeC--CC-CCEEEec
Confidence 54 7778899988887767777888999999999999996 77 99999 5688887665544333 22 3699999
Q ss_pred cCcccce-EEEEEEEcCCeeeE-EEEEEEEeCCCCCCCCCceecccccceEEEEecCCCCCCCeeeeEEEEEEEcCCCCc
Q psy7042 1853 IRKEDAG-DYTVNLSNSSGSVS-GTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPH 1930 (2245)
Q Consensus 1853 ~~~~d~G-~Y~C~a~n~~g~~~-~~~~l~v~~~p~~~~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~ 1930 (2245)
+..+|+| .|+|.|.|..|... ..+.|.|...
T Consensus 152 v~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~----------------------------------------------- 184 (290)
T 2o26_X 152 VKRAYHRLCVRCAAQRDGTWLHSDKFTLKVREA----------------------------------------------- 184 (290)
T ss_dssp CCGGGTTCEEEEEEEETTEEEECCCEEEEEECC-----------------------------------------------
T ss_pred ccHHHCCCEEEEEEEECCceEEeEEEEEEEEeC-----------------------------------------------
Confidence 9999999 99999998755422 1233333210
Q ss_pred eEEEeeecCcceEEecCCCCCCeEEEEEEEECCCCCCCCCCCcCceeccCCCCCCCCCCCcEEEEEcCCeEEEEEeccCC
Q psy7042 1931 WICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLD 2010 (2245)
Q Consensus 1931 ~~~~~~~~~~~~~~i~~l~~~~~y~~~~~a~n~~g~~~~s~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~ 2010 (2245)
T Consensus 185 -------------------------------------------------------------------------------- 184 (290)
T 2o26_X 185 -------------------------------------------------------------------------------- 184 (290)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCceeEEEEEEeeecCccceEEEEEEeccceEEeCCCcCCceEEEEEEEEeccccCCCcCCCCcccccCcccCCCceE
Q psy7042 2011 DGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEI 2090 (2245)
Q Consensus 2011 ~~~~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~s~~v~~~~~~~~~~p~~ 2090 (2245)
...+|.+
T Consensus 185 -------------------------------------------------------------------------~~~~P~i 191 (290)
T 2o26_X 185 -------------------------------------------------------------------------IKAIPVV 191 (290)
T ss_dssp -------------------------------------------------------------------------CCSCCEE
T ss_pred -------------------------------------------------------------------------CCCCCcc
Confidence 0113445
Q ss_pred EeeccceeeecCccEEEEEEEEeeCCCe-EEEeeCCEee----CCCCcEEEE---EeCcEEEEEEcCCCCCCCeEEEEEE
Q psy7042 2091 IVPLRNANAIQNHNAQFQCTITGCPKPT-ISWLKGSREI----TPSARHHIF---AEGDTYTLIINSVYGVDADEYVCRA 2162 (2245)
Q Consensus 2091 ~~~~~~~~~~~g~~v~l~C~~~g~P~p~-i~W~~~g~~l----~~~~~~~~~---~~~~~~~L~i~~v~~~d~G~Y~C~a 2162 (2245)
...+.+..+.+|+.++|.|.+.|.|.|. |.|+|+|..+ .......+. .......|.|.++..+|+|.|+|.|
T Consensus 192 ~~~~~~~~v~~G~~v~l~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a 271 (290)
T 2o26_X 192 SVPETSHLLKKGDTFTVVCTIKDVSTSVNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYA 271 (290)
T ss_dssp ECSCSBCCCCTTCCEEEEEEEEESSTTCEEEEEEESSSEEECCCEECCEEEEETTEEEEEEEEEESSCCSSSCEEEEEEE
T ss_pred ccCCCcceEecCCcEEEEEEEecCCcceeEEEecCCCCCccceeecccccccCceeeEEEEEEEEcCCCcccCeEEEEEE
Confidence 4444555788999999999999999997 9999999873 333322222 1223458999999999999999999
Q ss_pred EeCCceeeEEEEEEEEcCC
Q psy7042 2163 VNKGGVKSTKAELIIMTAP 2181 (2245)
Q Consensus 2163 ~N~~G~~~~~~~l~V~~~p 2181 (2245)
.|.+|..+..+.|.|..+|
T Consensus 272 ~N~~g~~~~~~~l~V~~~P 290 (290)
T 2o26_X 272 NNTFGSANVTTTLKVVEKG 290 (290)
T ss_dssp ECSSCEEEEEEEECC----
T ss_pred eCCCCcEEEEEEEEEEeCC
Confidence 9999999999999987654
No 68
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.94 E-value=1.1e-25 Score=271.44 Aligned_cols=275 Identities=18% Similarity=0.260 Sum_probs=206.8
Q ss_pred CCCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECCeeccCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEEcC
Q psy7042 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNS 168 (2245)
Q Consensus 89 ~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 168 (2245)
++|.|...+..+.+.+|+.++|.|.+.+ .|.|++++.... .+...++...|.|.+++.+|+|.|+|.|.|.
T Consensus 3 p~p~i~~~~~~~~v~~G~~v~L~C~~~~----~v~W~~~~~~~~-----~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~ 73 (289)
T 3ejj_X 3 PAPVIEPSGPELVVEPGETVTLRCVSNG----SVEWDGPISPYW-----TLDPESPGSTLTTRNATFKNTGTYRCTELED 73 (289)
T ss_dssp -CCEEESCSSEEEECTTCCEEEEEECSS----CCEEECSCSSSS-----EECCCSSCCEEEESSCCGGGCEEEEEECCC-
T ss_pred CCcEecCCCceEEECCCCCEEEEEEeCC----cEEEccCCCceE-----EEeccCCccEEEEeeeccccCEEEEEEEecc
Confidence 5788888888899999999999999987 499998775322 1222233346999999999999999999999
Q ss_pred cccceeEEEEEecCCCe-eecCCCceEEcCCCeEEEEEEEecCCCce-EEEee-CceeeecCCceEEEEeCCeEEEEEcc
Q psy7042 169 VGFAHTSSRVKIGTPPR-IDRMPNALYIPEGDNTKVKIFYAGDQPME-VSLTK-NGRVVQSDDRFKFTVLDDYIIIFIKE 245 (2245)
Q Consensus 169 ~g~~~~~~~l~V~~~P~-~~~~~~~~~v~~G~~~~l~C~~~g~p~~~-i~W~~-~g~~l~~~~~~~~~~~~~~~~L~i~~ 245 (2245)
.|..+..+.|.|..+|. +...+....+.+|+.+.|.|.+.+.|.+. +.|++ ++..+....++.+...+ .|.|.+
T Consensus 74 ~~~~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~---~L~i~~ 150 (289)
T 3ejj_X 74 PMAGSTTIHLYVKDPAHSWNLLAQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRKTVYFFSPWR---GFIIRK 150 (289)
T ss_dssp ----CEEEEEEECCSSCSEEESCSEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCTTCCEEEETTT---EEEESS
T ss_pred CCcceeEEEEEEeCCCcceecccceEEEecCCceEeEEEccCCCcceEEEEEecCCeecCCCccEEECCCC---CEEEee
Confidence 99888899999999887 56777889999999999999999877665 99986 77777666666554332 599999
Q ss_pred cCccCceeEEEEEE-cCCcceEEEEEEEEecCCCCCCCCcccceeeccceEEEecCCCCCCCceeEEEEEEEEecCCCce
Q psy7042 246 IRKEDAGDYTVNLS-NSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHW 324 (2245)
Q Consensus 246 ~~~~d~G~Y~C~a~-n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~s~~~~w~pp~~~~~~~~~~~~~~~~~~~~~~~ 324 (2245)
+..+|+|.|+|.|. |..+..+..+.|.|...+.
T Consensus 151 v~~~d~G~Y~C~a~~~~~~~~~~~~~l~V~~~~~---------------------------------------------- 184 (289)
T 3ejj_X 151 AKVLDSNTYVCKTMVNGRESTSTGIWLKVNRVHP---------------------------------------------- 184 (289)
T ss_dssp CCGGGCEEEEEEEEETTEEEECCCEEEEEESSCC----------------------------------------------
T ss_pred cccccCEEEEEEEEeCCCccccccEEEEEEECCC----------------------------------------------
Confidence 99999999999999 4445555556666543210
Q ss_pred EEeeeccCcceEEEcCCCCCCEEEEEEEEEecCCCCCCCCCCCceecCCCCCCCCCCCCcEEEeecCCeeEEEecCCCCC
Q psy7042 325 ICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDD 404 (2245)
Q Consensus 325 ~~~~~~~~~~~~~i~~l~~~~~~~~~c~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~v~~~~~~~~~l~W~~~~~~ 404 (2245)
T Consensus 185 -------------------------------------------------------------------------------- 184 (289)
T 3ejj_X 185 -------------------------------------------------------------------------------- 184 (289)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCccEEEEEeeecCCCCcEEEeeeecCCceeecCCcccCceEEEEEEeecCCCCCCCCCCCCcEEecCCcccCCCcee
Q psy7042 405 GGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEII 484 (2245)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~s~~~~~v~~~~~~~~~~p~~~ 484 (2245)
.+|.+.
T Consensus 185 --------------------------------------------------------------------------~~p~i~ 190 (289)
T 3ejj_X 185 --------------------------------------------------------------------------EPPQIK 190 (289)
T ss_dssp --------------------------------------------------------------------------CCCEEE
T ss_pred --------------------------------------------------------------------------CCCeEE
Confidence 123333
Q ss_pred ccccccccccccceeeEEEEec-cCcCeEEEEeCCeecCCCccEEEEee--CCeEEEEEecccccCCceEEEEEEeCCCC
Q psy7042 485 VPLRNANAIQNHNAQFQCTITG-CPKPTISWLKGSREITPSARHHIFAE--GDTYTLIINSVYGVDADEYVCRAVNKGGV 561 (2245)
Q Consensus 485 ~~~~~~~~~~g~~~~l~C~~~g-~p~~~v~W~~~~~~i~~~~~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~ 561 (2245)
..+....+.+|+++.|.|.+.+ .|.+.+.|++++..+........... .....|.|.++..+|+|.|+|.|.|..|.
T Consensus 191 ~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~ 270 (289)
T 3ejj_X 191 LEPSKLVRIRGEAAQIVCSATNAEVGFNVILKRGDTKLEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGT 270 (289)
T ss_dssp EESSSEECCSSSCEEEEEEEEESSSCCEEEEEETTEECCCCEEEEECSSSEEEEEEEEESSCCSSSCEEEEEEEECSSCE
T ss_pred ecCCceEEEeCCcEEEEEEeCCCCCceEEEEEECCEEeeccCCcccccceEEeeEEEEEEeecccCCEEEEEEEEcCCCC
Confidence 3334455578999999999998 79999999999998876543322111 11348999999999999999999999999
Q ss_pred CCcceeEeEecCCC
Q psy7042 562 KSTKAELIIMTAPK 575 (2245)
Q Consensus 562 ~~~~~~l~v~~~p~ 575 (2245)
...++.|.+..++.
T Consensus 271 ~~~s~~L~~~~~~~ 284 (289)
T 3ejj_X 271 RTATMNFQVVESHH 284 (289)
T ss_dssp EEEEEEEECC----
T ss_pred ccccEEEEEEeccc
Confidence 99999998876543
No 69
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.94 E-value=1e-26 Score=287.46 Aligned_cols=184 Identities=14% Similarity=0.184 Sum_probs=147.5
Q ss_pred CCCCceecCCcceEEeCCCeEEEEEEEe-------eecCCceEEEECCeec--cCCCeEEEEEcCcEEEEEEeeeccCCC
Q psy7042 88 GEKPDFIVPLKDLVVPLGKLLTLQCEAT-------GTPVPKCRWLRNGREI--SSGARYRVETAGGVFRLHFNEVTDVDN 158 (2245)
Q Consensus 88 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~-------g~p~~~i~W~~~g~~l--~~~~~~~~~~~~~~~~L~i~~~~~~d~ 158 (2245)
+..|.|...|.++.+.+|+.++|.|.+. +.|.+.|.|+|+|..+ ....+..+...++ .|.|.+++.+|+
T Consensus 16 ~~~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~--~L~i~~v~~~D~ 93 (339)
T 3o4o_C 16 RSCRFRGRHYKREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWAQDG--ALWLLPALQEDS 93 (339)
T ss_dssp --CEEEEECSCCEEEETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSCCSSSCEEEETT--EEEESSBCTTCC
T ss_pred hhhHhhCcCceEEEEECCccEEEEeccccccccccCCCCceEEEEECCCCcccCccccccEEeeCC--eEEECCCCcccC
Confidence 4689999999999999999999999998 8899999999999884 3322233333444 599999999999
Q ss_pred eEEEEEEEcCcccceeEEEEEecCCCeee--cCCCceEEcCCCeEEEEEE-----EecCCCceEEEeeCceeeecCC-ce
Q psy7042 159 GDYTCEAYNSVGFAHTSSRVKIGTPPRID--RMPNALYIPEGDNTKVKIF-----YAGDQPMEVSLTKNGRVVQSDD-RF 230 (2245)
Q Consensus 159 G~Y~C~a~n~~g~~~~~~~l~V~~~P~~~--~~~~~~~v~~G~~~~l~C~-----~~g~p~~~i~W~~~g~~l~~~~-~~ 230 (2245)
|.|+|.|.|..|....++.|.|..+|... .......+.+|+.+.|.|. +.|.|.+.|.|+|+|..+.... ++
T Consensus 94 G~Y~C~~~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~~~~ 173 (339)
T 3o4o_C 94 GTYVCTTRNASYCDKMSIELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNEKF 173 (339)
T ss_dssp EEEECCEEETTEEEEEEEEEEEECSCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTCSSE
T ss_pred EEEEEEEECCcceEEEEEEEEEEcCCCccccccccceEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCCCCcee
Confidence 99999999999988889999998877643 2334457899999999999 7889999999999999987653 33
Q ss_pred EEEEeCCeEEEEEcccCccCceeEEEEEEcCCcc----eEEEEEEEEec
Q psy7042 231 KFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGS----VSGTFTINITG 275 (2245)
Q Consensus 231 ~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~----~~~~~~l~V~~ 275 (2245)
.+ ..+...|.|.++..+|+|.|+|.|.|..|. .+..+.|.|..
T Consensus 174 ~~--~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~ 220 (339)
T 3o4o_C 174 LS--VRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKK 220 (339)
T ss_dssp EE--CTTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEEC
T ss_pred EE--cCCcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEc
Confidence 22 223347999999999999999999998873 45566666653
No 70
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.93 E-value=1.2e-25 Score=273.72 Aligned_cols=175 Identities=14% Similarity=0.145 Sum_probs=131.5
Q ss_pred eecCCcceEEeCCCeEEEEEEEeeecCC-----ceEEEECCeecc-------------CCCeEEEEEc-----CcEEEEE
Q psy7042 93 FIVPLKDLVVPLGKLLTLQCEATGTPVP-----KCRWLRNGREIS-------------SGARYRVETA-----GGVFRLH 149 (2245)
Q Consensus 93 ~~~~~~~~~v~~G~~v~L~C~~~g~p~~-----~i~W~~~g~~l~-------------~~~~~~~~~~-----~~~~~L~ 149 (2245)
++..|.++.+..|++|+|.|.+.+.|.+ .|.|+|+|.... ...++.+... .+..+|.
T Consensus 3 vv~~P~~v~~~~G~~v~L~C~v~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~ 82 (313)
T 4fqp_A 3 VVQAPTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLR 82 (313)
T ss_dssp EEECCSEECCBTTSCEEECCEEECCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEE
T ss_pred EEcCCCEEEEecCCCEEEEEEEECCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEE
Confidence 3456677888999999999999887765 389999886432 2234443211 1234699
Q ss_pred EeeeccCCCeEEEEEEE-cCcccceeEEEEEecCCCeeecCCCceEEcCCCeEEEEEEEe-cCCCceEEEeeCceeeecC
Q psy7042 150 FNEVTDVDNGDYTCEAY-NSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYA-GDQPMEVSLTKNGRVVQSD 227 (2245)
Q Consensus 150 i~~~~~~d~G~Y~C~a~-n~~g~~~~~~~l~V~~~P~~~~~~~~~~v~~G~~~~l~C~~~-g~p~~~i~W~~~g~~l~~~ 227 (2245)
|.+++.+|+|.|+|.|. +..|..+..+.|+|..+|.+...+....+..|+.+.|.|.+. +.|.+.+.|++++..+...
T Consensus 83 I~~v~~~D~G~Y~C~v~~~~~~~~~~~~~l~v~~~P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~~~~~ 162 (313)
T 4fqp_A 83 MFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNT 162 (313)
T ss_dssp ECSCCGGGCEEEEEEEECSSSCEEEEEEEECCBBCCEEEEEECCBCCCSSCEEEEEEEEEEEBSCCEEEEEETTCCEEEE
T ss_pred ECcCChhhCEEEEEEEeeccCcceeeeeeeeeccCCcceecccceEeecCceEEEEEEccCccCCcEEEeecCCcccccc
Confidence 99999999999999986 455667778889999999988877778888999999999875 7899999999999887543
Q ss_pred CceEEEEeCC---eEEEEEcccCccCceeEEEEEEcCCcceEE
Q psy7042 228 DRFKFTVLDD---YIIIFIKEIRKEDAGDYTVNLSNSSGSVSG 267 (2245)
Q Consensus 228 ~~~~~~~~~~---~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~ 267 (2245)
........+. .+.|.|.+...+|+|.|+|.|.|..+....
T Consensus 163 ~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~ 205 (313)
T 4fqp_A 163 SQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQ 205 (313)
T ss_dssp EEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCE
T ss_pred ceeeeecccccccceeeeecccccccCeeEEEEEEccCcCccc
Confidence 3222111111 236899999999999999999998765433
No 71
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.93 E-value=4.5e-25 Score=268.62 Aligned_cols=274 Identities=16% Similarity=0.230 Sum_probs=197.3
Q ss_pred ccCCceEEcCCCeEEEEEEecCcCCC-----eEEEeeCCEec-------------cCCceEEEEec-----CcEEEEEEe
Q psy7042 1702 VPLKDLVVPLGKLLTLQCEATGTPVP-----KCRWLRNGREI-------------SSGARYRVETA-----GGVFRLHFN 1758 (2245)
Q Consensus 1702 ~~~~~~~~~~G~~v~L~C~~~~~p~~-----~v~W~~~~~~l-------------~~~~~~~~~~~-----~~~~~L~i~ 1758 (2245)
..|..+.+..|++++|.|.+.+.+.+ .|.|+|++... ....++.+... .+..+|.|.
T Consensus 5 ~~P~~v~~~~G~~v~L~C~v~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~ 84 (313)
T 4fqp_A 5 QAPTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMF 84 (313)
T ss_dssp ECCSEECCBTTSCEEECCEEECCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEEEC
T ss_pred cCCCEEEEecCCCEEEEEEEECCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEEEC
Confidence 34566788999999999999877655 48999987532 22233433211 133569999
Q ss_pred eeccCCCeEEEEEEe-cCceeeEEEEEEEecCCCccccCCCceEEcCCCeEEEEEEEe-ccCCcEEEEEECCEEeecCCc
Q psy7042 1759 EVTDVDNGDYTCEAY-NSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYA-GDQPMEVSLTKNGRVVQSDDR 1836 (2245)
Q Consensus 1759 ~v~~~d~G~Y~C~~~-n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~-~~p~~~v~W~~~g~~l~~~~~ 1836 (2245)
+++.+|+|.|+|++. +..+.....+.|.|..+|.+...+....+..++.+.|.|.+. +.|.+.+.|++++..+.....
T Consensus 85 ~v~~~D~G~Y~C~v~~~~~~~~~~~~~l~v~~~P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~~~~~~~ 164 (313)
T 4fqp_A 85 GLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTSQ 164 (313)
T ss_dssp SCCGGGCEEEEEEEECSSSCEEEEEEEECCBBCCEEEEEECCBCCCSSCEEEEEEEEEEEBSCCEEEEEETTCCEEEEEE
T ss_pred cCChhhCEEEEEEEeeccCcceeeeeeeeeccCCcceecccceEeecCceEEEEEEccCccCCcEEEeecCCccccccce
Confidence 999999999999985 456777778889888888877666667778899999999875 679999999999887654322
Q ss_pred eEEEEcCC---eEEEEEcccCcccceEEEEEEEcCCeeeEEEEEEEEeCCCCCCCCCceecccccceEEEEecCCCCCCC
Q psy7042 1837 FKFTVLDD---YIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGG 1913 (2245)
Q Consensus 1837 ~~~~~~~~---~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~l~w~~p~~~~~ 1913 (2245)
......+. ...|.|.....+|.|.|+|.|.|..+.......+.+..
T Consensus 165 ~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V------------------------------- 213 (313)
T 4fqp_A 165 VPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTV------------------------------- 213 (313)
T ss_dssp EECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCB-------------------------------
T ss_pred eeeecccccccceeeeecccccccCeeEEEEEEccCcCccceeeeeccc-------------------------------
Confidence 21111111 13588888888899999999988765433332222110
Q ss_pred eeeeEEEEEEEcCCCCceEEEeeecCcceEEecCCCCCCeEEEEEEEECCCCCCCCCCCcCceeccCCCCCCCCCCCcEE
Q psy7042 1914 LKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVV 1993 (2245)
Q Consensus 1914 ~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~~~a~n~~g~~~~s~~~~~~~~~~~~~~p~~p~~~~~ 1993 (2245)
T Consensus 214 -------------------------------------------------------------------------------- 213 (313)
T 4fqp_A 214 -------------------------------------------------------------------------------- 213 (313)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEcCCeEEEEEeccCCCCCCceeEEEEEEeeecCccceEEEEEEeccceEEeCCCcCCceEEEEEEEEeccccCCCcCC
Q psy7042 1994 TQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSA 2073 (2245)
Q Consensus 1994 ~~~~~~~v~l~W~~p~~~~~~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~ 2073 (2245)
T Consensus 214 -------------------------------------------------------------------------------- 213 (313)
T 4fqp_A 214 -------------------------------------------------------------------------------- 213 (313)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcccccCcccCCCceEEeec-cceeeecCccEEEEEEEEeeCCC-eEEEeeCCEeeCCCCcEEEEEeCcEEEEEEcCCC
Q psy7042 2074 SNSVQIKDPMAAKAPEIIVPL-RNANAIQNHNAQFQCTITGCPKP-TISWLKGSREITPSARHHIFAEGDTYTLIINSVY 2151 (2245)
Q Consensus 2074 s~~v~~~~~~~~~~p~~~~~~-~~~~~~~g~~v~l~C~~~g~P~p-~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~ 2151 (2245)
..+|.+...+ ....+.+|+.++|.|.+.|+|.| .|+|+|+|+.|.... .. ++. .|.|.++.
T Consensus 214 -----------~~~P~v~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~~~~~~l~~~~---~~-~~~--~L~i~~v~ 276 (313)
T 4fqp_A 214 -----------YYPPEVSISGYDNNWYLGQNEATLTCDARSNPEPTGYNWSTTMGPLPPFA---VA-QGA--QLLIRPVD 276 (313)
T ss_dssp -----------CEEEEEEEECCCSCEETTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTE---EE-ETT--EEEECCCS
T ss_pred -----------ccCCccccccccceeecCCCeEEEEEEecCCCCCcEEEEEECCEECCCce---EE-eCC--EEEECcCC
Confidence 0012221111 12235568899999999999999 599999999887543 22 333 79999999
Q ss_pred CCCCeEEEEEEEeCCceeeEEEEEEEEcCCCC
Q psy7042 2152 GVDADEYVCRAVNKGGVKSTKAELIIMTAPKF 2183 (2245)
Q Consensus 2152 ~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~p~~ 2183 (2245)
.+|+|.|+|.|.|.+|..+.++.|.|..+|..
T Consensus 277 ~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~PP~ 308 (313)
T 4fqp_A 277 KPINTTLICNVTNALGARQAELTVQVKEGPPH 308 (313)
T ss_dssp SCCEEEEEEEEECSSCEEEEEEEEEEECCC--
T ss_pred hhhCEEEEEEEEeCCCcEEEEEEEEEEeCCCC
Confidence 99999999999999999999999999876543
No 72
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.93 E-value=1e-26 Score=286.97 Aligned_cols=174 Identities=22% Similarity=0.414 Sum_probs=70.9
Q ss_pred CCceEEcCCCeEEEEEEecCc-CCCeEEEeeCCEeccCCceEEEEecCcEEEEEEeeeccCCCeEEEEEEecCceeeEEE
Q psy7042 1704 LKDLVVPLGKLLTLQCEATGT-PVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTS 1782 (2245)
Q Consensus 1704 ~~~~~~~~G~~v~L~C~~~~~-p~~~v~W~~~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~~~~ 1782 (2245)
+.+..+.+|++++|.|.+.+. |.+.+.|+|+|..+....++.+. ...|.|.+++.+|+|.|+|.+.|. |.....
T Consensus 15 ~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~----~~~L~i~~v~~~D~G~Y~C~a~n~-~~~~~~ 89 (334)
T 1ry7_B 15 QEQLVFGSGDAVELSCPPPGGGPMGPTVWVKDGTGLVPSERVLVG----PQRLQVLNASHEDSGAYSCRQRLT-QRVLCH 89 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCcEEEecCCcEEEEeeCCCCCCCcceEEEECCeeCCCcccEEec----cceEEEeecccccCEEEEEEEEeC-CeEEEE
Confidence 677889999999999999876 57899999999988776666542 235999999999999999999998 777777
Q ss_pred EEEEecCC----------------------CccccC----CCceEEcCCCeEEEEEEEeccCCcEEEEEECCEEeecCCc
Q psy7042 1783 SRVKIGTP----------------------PRIDRM----PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDR 1836 (2245)
Q Consensus 1783 ~~l~V~~~----------------------p~~~~~----~~~~~~~~g~~~~l~C~~~~~p~~~v~W~~~g~~l~~~~~ 1836 (2245)
..|.|..+ |.+... .....+.+|+.+.|.|.+.|.|.+.+.|+++|..+....+
T Consensus 90 ~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~ 169 (334)
T 1ry7_B 90 FSVRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHR 169 (334)
T ss_dssp -----------------------------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCCEEECCBTTBCCCTTSS
T ss_pred EEEEEeccCccccccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEccCCCCCeEEEEECCEECccccc
Confidence 77777643 333321 2346788999999999999999999999999998865533
Q ss_pred e-EEEEcCCeEEEEEcccCcccceEEEEEEEcCCeeeEEEEEEEEeC
Q psy7042 1837 F-KFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITG 1882 (2245)
Q Consensus 1837 ~-~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 1882 (2245)
. ..........|.|.++..+|+|.|+|.|.|..|.....+.|.|..
T Consensus 170 ~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 216 (334)
T 1ry7_B 170 IGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLE 216 (334)
T ss_dssp TTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEEC
T ss_pred ccceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEec
Confidence 2 112223445899999999999999999999999888777777754
No 73
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.93 E-value=1.1e-24 Score=258.17 Aligned_cols=166 Identities=16% Similarity=0.175 Sum_probs=138.9
Q ss_pred CCceecCCcceEEeCCCeEEEEEEEeeecCC-ceEEEECCeeccCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEEcC
Q psy7042 90 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVP-KCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNS 168 (2245)
Q Consensus 90 ~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~-~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 168 (2245)
+|.|...|..+.+.+|+.++|.|.+.+.|.+ .|.|+|+|..+... +. .|.|.+++.+|+|.|+|.|.|.
T Consensus 1 kP~i~~~p~~~~v~~G~~v~l~C~~~~~~~~~~~~W~~~g~~~~~~--------~~--~l~i~~~~~~d~G~Y~C~~~~~ 70 (262)
T 3rjd_A 1 KAVITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQTS--------TP--SYRITSASVNDSGEYRCQRGLS 70 (262)
T ss_dssp CCEEEESSCCSEEETTCCEEEEEECSSCCCTTCEEEEETTEECSCC--------SS--EEEESSCCGGGCEEEEEEESSS
T ss_pred CCeEecCCCcEEeeCCCeEEEEEECCCCCCCceEEEEECCEEeecc--------CC--eEEEecCCcccCeEEEEEEecC
Confidence 4888899999999999999999999998887 99999999998653 22 5999999999999999999986
Q ss_pred cccceeEEEEEecCCCeeecCCCceEEcCCCeEEEEEEE-ecCCCceEEEeeCceeeecCCceEEEEeCCeEEEEEcccC
Q psy7042 169 VGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFY-AGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIR 247 (2245)
Q Consensus 169 ~g~~~~~~~l~V~~~P~~~~~~~~~~v~~G~~~~l~C~~-~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~ 247 (2245)
.++ ..+.|.|..+|.+. .+....+.+|+.+.|.|.+ .+.|.+.+.|+|+|..+.... ....|.|.++.
T Consensus 71 ~~s--~~~~l~v~~~~~~~-~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~~~--------~~~~l~i~~~~ 139 (262)
T 3rjd_A 71 GRS--DPIQLEIHRGWLLL-QVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFFH--------WNSNLTILKTN 139 (262)
T ss_dssp CCC--CCEEEEEECSSEEE-EESCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEEEE--------ECCCEEESSCC
T ss_pred Ccc--ccEEEEEeccceEe-cCCCeEEecCCeEEEEEEccCCCCCceEEEEECCccccccC--------CCCeEEEEECC
Confidence 654 46678888776543 4456678899999999999 788899999999999885321 12369999999
Q ss_pred ccCceeEEEEEEcCCcceEEEEEEEEecC
Q psy7042 248 KEDAGDYTVNLSNSSGSVSGTFTINITGL 276 (2245)
Q Consensus 248 ~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 276 (2245)
.+|+|.|+|.|.|..+..+..+.|.|..+
T Consensus 140 ~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~ 168 (262)
T 3rjd_A 140 ISHNGTYHCSGMGKHRYTSAGISVTVKEL 168 (262)
T ss_dssp GGGCEEEEEEEESSSEEEEECEEEEEECS
T ss_pred hhhCEEEEEEEeCCCCccccceEEEeccC
Confidence 99999999999999988888888887654
No 74
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.93 E-value=1.2e-24 Score=262.37 Aligned_cols=276 Identities=18% Similarity=0.268 Sum_probs=202.4
Q ss_pred CCCceeccCCceEEcCCCeEEEEEEecCcCCCeEEEeeCCEeccCCceEEEEecCcEEEEEEeeeccCCCeEEEEEEecC
Q psy7042 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNS 1775 (2245)
Q Consensus 1696 ~~p~~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~ 1775 (2245)
.+|.+...+..+.+.+|++++|.|.+.+ .+.|++++... ...........|.|.+++.+|+|.|+|.+.|.
T Consensus 3 p~p~i~~~~~~~~v~~G~~v~L~C~~~~----~v~W~~~~~~~-----~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~ 73 (289)
T 3ejj_X 3 PAPVIEPSGPELVVEPGETVTLRCVSNG----SVEWDGPISPY-----WTLDPESPGSTLTTRNATFKNTGTYRCTELED 73 (289)
T ss_dssp -CCEEESCSSEEEECTTCCEEEEEECSS----CCEEECSCSSS-----SEECCCSSCCEEEESSCCGGGCEEEEEECCC-
T ss_pred CCcEecCCCceEEECCCCCEEEEEEeCC----cEEEccCCCce-----EEEeccCCccEEEEeeeccccCEEEEEEEecc
Confidence 4566666777889999999999999987 49999876432 12222334456999999999999999999998
Q ss_pred ceeeEEEEEEEecCCCc-cccCCCceEEcCCCeEEEEEEEeccCCcE-EEEEE-CCEEeecCCceEEEEcCCeEEEEEcc
Q psy7042 1776 VGFAHTSSRVKIGTPPR-IDRMPNALYIPEGDNTKVKIFYAGDQPME-VSLTK-NGRVVQSDDRFKFTVLDDYIIIFIKE 1852 (2245)
Q Consensus 1776 ~g~~~~~~~l~V~~~p~-~~~~~~~~~~~~g~~~~l~C~~~~~p~~~-v~W~~-~g~~l~~~~~~~~~~~~~~~~l~i~~ 1852 (2245)
.+.....+.|.|..+|. +...+....+.+|+++.|.|.+.+.+.+. +.|++ ++..+....++.+. . ...|.|.+
T Consensus 74 ~~~~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~--~-~~~L~i~~ 150 (289)
T 3ejj_X 74 PMAGSTTIHLYVKDPAHSWNLLAQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRKTVYFFS--P-WRGFIIRK 150 (289)
T ss_dssp ----CEEEEEEECCSSCSEEESCSEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCTTCCEEEE--T-TTEEEESS
T ss_pred CCcceeEEEEEEeCCCcceecccceEEEecCCceEeEEEccCCCcceEEEEEecCCeecCCCccEEEC--C-CCCEEEee
Confidence 88888889999988776 45666788899999999999999977665 99986 67777666555443 1 23599999
Q ss_pred cCcccceEEEEEEEc-CCeeeEEEEEEEEeCCCCCCCCCceecccccceEEEEecCCCCCCCeeeeEEEEEEEcCCCCce
Q psy7042 1853 IRKEDAGDYTVNLSN-SSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHW 1931 (2245)
Q Consensus 1853 ~~~~d~G~Y~C~a~n-~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~ 1931 (2245)
+..+|+|.|+|.|.| ..+..+..+.|.|...
T Consensus 151 v~~~d~G~Y~C~a~~~~~~~~~~~~~l~V~~~------------------------------------------------ 182 (289)
T 3ejj_X 151 AKVLDSNTYVCKTMVNGRESTSTGIWLKVNRV------------------------------------------------ 182 (289)
T ss_dssp CCGGGCEEEEEEEEETTEEEECCCEEEEEESS------------------------------------------------
T ss_pred cccccCEEEEEEEEeCCCccccccEEEEEEEC------------------------------------------------
Confidence 999999999999984 3333333333333211
Q ss_pred EEEeeecCcceEEecCCCCCCeEEEEEEEECCCCCCCCCCCcCceeccCCCCCCCCCCCcEEEEEcCCeEEEEEeccCCC
Q psy7042 1932 ICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDD 2011 (2245)
Q Consensus 1932 ~~~~~~~~~~~~~i~~l~~~~~y~~~~~a~n~~g~~~~s~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~ 2011 (2245)
T Consensus 183 -------------------------------------------------------------------------------- 182 (289)
T 3ejj_X 183 -------------------------------------------------------------------------------- 182 (289)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCceeEEEEEEeeecCccceEEEEEEeccceEEeCCCcCCceEEEEEEEEeccccCCCcCCCCcccccCcccCCCceEE
Q psy7042 2012 GGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEII 2091 (2245)
Q Consensus 2012 ~~~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~s~~v~~~~~~~~~~p~~~ 2091 (2245)
...+|.+.
T Consensus 183 ------------------------------------------------------------------------~~~~p~i~ 190 (289)
T 3ejj_X 183 ------------------------------------------------------------------------HPEPPQIK 190 (289)
T ss_dssp ------------------------------------------------------------------------CCCCCEEE
T ss_pred ------------------------------------------------------------------------CCCCCeEE
Confidence 01134555
Q ss_pred eeccceeeecCccEEEEEEEEe-eCCCeEEEeeCCEeeCCCCcEEEEEe--CcEEEEEEcCCCCCCCeEEEEEEEeCCce
Q psy7042 2092 VPLRNANAIQNHNAQFQCTITG-CPKPTISWLKGSREITPSARHHIFAE--GDTYTLIINSVYGVDADEYVCRAVNKGGV 2168 (2245)
Q Consensus 2092 ~~~~~~~~~~g~~v~l~C~~~g-~P~p~i~W~~~g~~l~~~~~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~ 2168 (2245)
..+....+.+|+.++|.|.+.| .|.|.|.|+|+|..+........... .....|.|.++..+|+|.|+|.|.|.+|.
T Consensus 191 ~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~ 270 (289)
T 3ejj_X 191 LEPSKLVRIRGEAAQIVCSATNAEVGFNVILKRGDTKLEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGT 270 (289)
T ss_dssp EESSSEECCSSSCEEEEEEEEESSSCCEEEEEETTEECCCCEEEEECSSSEEEEEEEEESSCCSSSCEEEEEEEECSSCE
T ss_pred ecCCceEEEeCCcEEEEEEeCCCCCceEEEEEECCEEeeccCCcccccceEEeeEEEEEEeecccCCEEEEEEEEcCCCC
Confidence 5555556778999999999998 79999999999998876542221111 11348999999999999999999999999
Q ss_pred eeEEEEEEEEcCCCC
Q psy7042 2169 KSTKAELIIMTAPKF 2183 (2245)
Q Consensus 2169 ~~~~~~l~V~~~p~~ 2183 (2245)
.++++.|.+..++..
T Consensus 271 ~~~s~~L~~~~~~~~ 285 (289)
T 3ejj_X 271 RTATMNFQVVESHHH 285 (289)
T ss_dssp EEEEEEEECC-----
T ss_pred ccccEEEEEEecccc
Confidence 999999988765543
No 75
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=99.93 E-value=1.7e-23 Score=262.36 Aligned_cols=310 Identities=22% Similarity=0.277 Sum_probs=232.5
Q ss_pred CCCCCcccEEeeeeCc-eEEEEecCCCCCCCCccceEEEeeeecCCC--ceEEecceeeeceEEEecCCCCceeeEEEEE
Q psy7042 901 RPHPPENLHADEFAGD-SLTLYWTPPRDNGGSEITNYVVEKKDYNST--VWTKVSSYVTTPFVRVRNLAIGSTYEFRVMA 977 (2245)
Q Consensus 901 ~P~~p~~l~~~~~~~~-~~~l~W~~p~~~~g~~i~~y~i~~~~~~~~--~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a 977 (2245)
++.||.+|.+...+++ ++.|+|+++.. + .+.+|+|++...... .+...........+.+.+|.|++.|.|+|+|
T Consensus 2 P~~~P~~l~~~~~~~~~sv~l~W~~~~~--~-~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a 78 (375)
T 3t1w_A 2 PLSPPTNLHLEANPDTGVLTVSWERSTT--P-DITGYRITTTPTNGQQGNSLEEVVHADQSSCTFDNLSPGLEYNVSVYT 78 (375)
T ss_dssp CCCCCEEEEEEEETTTTEEEEEEECCSC--S-SCCEEEEEEEETTCTTSCCEEEEEETTCCEEEECCCCTTCCEEEEEEE
T ss_pred CCCCCCccEEEecCCCeEEEEEEeCCCC--C-CeeeEEEEEEECCCCCCcceeEEcCCCccEEEEcCCcCCCEEEEEEEE
Confidence 6789999999999899 99999999854 2 789999999886543 2333344456789999999999999999999
Q ss_pred EeccccCCCccccCcccccCCCCCCCCCCCCeeEeecCCeEEEEecCCCCCCCCccceEEEEEEecCCccceeccccccC
Q psy7042 978 ENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIP 1057 (2245)
Q Consensus 978 ~n~~g~~~~s~~~~~~~~~t~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~ 1057 (2245)
.|..|.+.+. ...+....| +|.++.+...+.+++.|+|++|. ++++.+|.|+|+..+...+..... ..
T Consensus 79 ~~~~g~s~~~------~~~~~~~~p-~p~~l~~~~~~~~si~l~W~~~~---~~~i~~Y~v~~~~~~~~~~~~~~~--~~ 146 (375)
T 3t1w_A 79 VKDDKESVPI------SDTIIPEVP-QLTDLSFVDITDSSIGLRWTPLN---SSTIIGYRITVVAAGEGIPIFEDF--VD 146 (375)
T ss_dssp EETTEECCCE------EEEECCCCC-CCSCCEEECCCSSEEEEECCCCC---CTTEEEEEEEEEESSSCCSCEEEE--EC
T ss_pred EcCCCCCCcE------EeeEcCCCC-CCceEEEEecCCCeEEEEEECCC---CCCceEEEEEEEECCCCCceeEEE--cC
Confidence 9988876543 233344555 48999999999999999999875 246999999998765432211111 11
Q ss_pred CcceeEEEEeecccccCCccCchhhhhhhhhcccccccccccCCcEEEEEEEEEecCCCCCCCCCCcceeecCCCCCCcc
Q psy7042 1058 DTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSDIIMCCAPPCAPKI 1137 (2245)
Q Consensus 1058 ~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~v~A~n~~G~~~~s~~~~~~~~~~~p~~p~~ 1137 (2245)
... +.++|.+|.+++.|.|+|+|.|..|.|.++. . .
T Consensus 147 ~~~------------------------------~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~s~---~-~---------- 182 (375)
T 3t1w_A 147 SSV------------------------------GYYTVTGLEPGIDYDISVITLINGGESAPTT---L-T---------- 182 (375)
T ss_dssp TTC------------------------------CEEEEECCCTTCEEEEEEEEEETTEECCCEE---E-E----------
T ss_pred CCc------------------------------ceEEEeCCCCCCEEEEEEEEEeCCcccCCee---e-e----------
Confidence 111 1126999999999999999999988654321 0 0
Q ss_pred ccCCCceeEEEEcCCeEEEEEEeeecCCCcceEEeCCeecCCCCcEEEEEccceEEEEecCccccccceeEEEEEEcCCc
Q psy7042 1138 TSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQLVNTVG 1217 (2245)
Q Consensus 1138 ~~~~~~~~~~v~~~~~~~l~~~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~a~n~~g 1217 (2245)
T Consensus 183 -------------------------------------------------------------------------------- 182 (375)
T 3t1w_A 183 -------------------------------------------------------------------------------- 182 (375)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeEEEEEEEECCCCCCCCCceeeeccCCcEEEEecCCCCCCCcceeeeEEEEeeccc-cceEEcccceecceEEecCCC
Q psy7042 1218 SDSASCKVYVVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESAT-GFWSKLSSFVRSPAYDVFGLE 1296 (2245)
Q Consensus 1218 ~~~~s~~~~v~~~p~~p~~~~~~~~~~~~s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~-~~~~~~~~~~~~~~~~l~~L~ 1296 (2245)
..+.+. ++.++.+...+.+++.|+|++|. +..+.+|.|+|..... ..+..+.......++.+.+|.
T Consensus 183 ---------~~t~~~-~p~~l~~~~~~~~si~l~W~~p~---~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~ 249 (375)
T 3t1w_A 183 ---------QQTAVP-PPTDLRFTNIGPDTMRVTWAPPP---SIDLTNFLVRYSPVKNEEDVAELSISPSDNAVVLTNLL 249 (375)
T ss_dssp ---------EECCCC-CCEEEEEESCCSSCEEEEEECCS---SCCCCEEEEEEEEGGGTTCCEEEEECTTCCEEEECSCC
T ss_pred ---------eecCCC-CCceeEEEecccCEEEEEEcCCC---CCCccEEEEEEEeCCCCCCcEEEEcCCCcCEEEeCCCC
Confidence 001111 23456677778889999999873 3448999999887643 456666566667899999999
Q ss_pred CCceEEEEEEEeccccCCCCcccCCcccccCCCCCCCCCCCCeeeeccCCcEEEEeeCCCCCCCccceeeEEEEecC
Q psy7042 1297 TNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTP 1373 (2245)
Q Consensus 1297 ~~t~Y~~~v~A~n~~G~~~~s~~~~~~~~~~~~~~p~~p~~~~~~~~~~~s~~l~W~~p~~~~g~~i~~y~i~~~~~ 1373 (2245)
+++.|.|+|+|.|..|.|.++.... .+.|.+|.++.+..++.+++.|+|.+|. +.+.+|.|.|+..
T Consensus 250 p~t~Y~~~V~A~~~~g~s~~~~~~~-------~t~p~~P~~l~~~~~~~~sv~l~W~~p~----~~~~~Y~v~~~~~ 315 (375)
T 3t1w_A 250 PGTEYVVSVSSVYEQHESTPLRGRQ-------KTGLDSPTGIDFSDITANSFTVHWIAPR----ATITGYRIRHHPE 315 (375)
T ss_dssp TTCEEEEEEEEEETTEECCCEEEEE-------ECCCCCCEEEEEESCCSSCEEEEEECCS----SCCSEEEEEEEET
T ss_pred CCCEEEEEEEEEcCCCcCCceeeEE-------ecCCCCCCccEeeeccCCEEEEEECCCC----cceeeEEEEEEEC
Confidence 9999999999999999987654322 2467888899999999999999999973 4789999998754
No 76
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.93 E-value=3.9e-25 Score=284.14 Aligned_cols=220 Identities=11% Similarity=0.020 Sum_probs=147.8
Q ss_pred eceEEECCCccCCcEEEEEEEEcCCCCCCCCCccccEEEeeccCCCCCceecCCcceEEeCCCeEEEEEEEeee-cCC-c
Q psy7042 44 ECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGT-PVP-K 121 (2245)
Q Consensus 44 ~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~~~v~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~-p~~-~ 121 (2245)
..+|.|.+++.+|+|.|+|.|.|..+..........+.|.. ....+|.+...+....+.+|+.++|.|.+.|. |.| .
T Consensus 78 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~-~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~ 156 (444)
T 1igt_B 78 TLYLQMSRLKSEDTAMYYCARHGGYYAMDYWGQGTTVTVSS-AKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVT 156 (444)
T ss_dssp EEEEEECSCCGGGCEEEEEEEECSSSCEEEEBCCEEEEECS-CCCBCCEEEEECCCSSCCCSSCEEEEEEEEEEBSSCCE
T ss_pred eEEEEECCCCHHHCEEEEEEEecCCcccccccCcEEEEecC-CCCCCCceeEecccccCCCCCcEEEEEEEcceeCCCcE
Confidence 46899999999999999999998764310000112222221 11235555432222235899999999999885 776 9
Q ss_pred eEEEECCeeccCCCeEEEEEcCc---EEEEEEeeeccCCCeEEEEEEEcCcccceeEEEEEe------------------
Q psy7042 122 CRWLRNGREISSGARYRVETAGG---VFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI------------------ 180 (2245)
Q Consensus 122 i~W~~~g~~l~~~~~~~~~~~~~---~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V------------------ 180 (2245)
|.|+|++..+...........+. ...|.|.++..+| |.|+|.|.|..|.......+.+
T Consensus 157 v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 235 (444)
T 1igt_B 157 LTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRGPTIKPCPPCKCPAPNL 235 (444)
T ss_dssp EEEGGGTBCTTEEECCCEEETTEEEEEEEEEECSTTTTT-SCCEEEEEETTTTEEEEEECCCCCCSCCCCCCCSCCCSCC
T ss_pred EEEecCCCCCCeEecCccccCCcEEEEEEEEEchhhcCC-CeEEEEEEeCCCCcceEEEeccCCCCcccCCccccCCccc
Confidence 99999987642110000001111 1358999999999 9999999999987655555533
Q ss_pred cCCCee-ecCCCceE-EcCCCeEEEEEEEecCC----CceEEEeeCceeeecCCceE--EEEe---CCeEEEEEcccCcc
Q psy7042 181 GTPPRI-DRMPNALY-IPEGDNTKVKIFYAGDQ----PMEVSLTKNGRVVQSDDRFK--FTVL---DDYIIIFIKEIRKE 249 (2245)
Q Consensus 181 ~~~P~~-~~~~~~~~-v~~G~~~~l~C~~~g~p----~~~i~W~~~g~~l~~~~~~~--~~~~---~~~~~L~i~~~~~~ 249 (2245)
..+|.+ ...|.... +.+|+.++|.|.+.|.| .+.|+|+|+|..+....... .... ...+.|.|.++..+
T Consensus 236 ~~~p~v~~~~p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 315 (444)
T 1igt_B 236 LGGPSVFIFPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWM 315 (444)
T ss_dssp CCCCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTCCCCEEEEEETTEECSSTTCBCCEEECSSSEEEEEEEECCHHHHH
T ss_pred CCCceEEecCCchhheeecCCCcEEEEEEeecccCCCCeEEEEEECCccccCcccccceeCCCCcEEEEEEEEEcHHHhc
Confidence 235665 34444333 58999999999999873 36999999998876443211 1111 12357999999999
Q ss_pred CceeEEEEEEcCCcce
Q psy7042 250 DAGDYTVNLSNSSGSV 265 (2245)
Q Consensus 250 d~G~Y~C~a~n~~g~~ 265 (2245)
|+|.|+|.|.|..|..
T Consensus 316 d~G~Y~C~a~n~~~~~ 331 (444)
T 1igt_B 316 SGKEFKCKVNNKDLPA 331 (444)
T ss_dssp TTCEEEEEEECTTCSS
T ss_pred cCCcEEEEEEcCCCCC
Confidence 9999999999987755
No 77
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.93 E-value=1.1e-25 Score=279.43 Aligned_cols=174 Identities=13% Similarity=0.165 Sum_probs=133.6
Q ss_pred CCcceEEeCCCeEEEEEEEeeecC-----------CceEEEECCee------cc-CCCeEEEEEcCcEEEEEEeeeccCC
Q psy7042 96 PLKDLVVPLGKLLTLQCEATGTPV-----------PKCRWLRNGRE------IS-SGARYRVETAGGVFRLHFNEVTDVD 157 (2245)
Q Consensus 96 ~~~~~~v~~G~~v~L~C~~~g~p~-----------~~i~W~~~g~~------l~-~~~~~~~~~~~~~~~L~i~~~~~~d 157 (2245)
.+..+.+.+|+.++|.|.+.+.|. +.|.|+|++.. +. ......+...++ .|.|.+++.+|
T Consensus 13 ~~~~v~v~~G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~--~L~i~~~~~~D 90 (349)
T 4dep_C 13 TMRQIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKEKD--VLWFRPTLLND 90 (349)
T ss_dssp CCCCCEEETTSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCEEEETT--EEEESSCCGGG
T ss_pred eeeeEEEecCCeEEEEccccccccccccccccCCCceEEEEECCCCCcccccccccccCceEeecCC--EEEEccCChhh
Confidence 356688999999999999987664 89999998842 22 011222333344 59999999999
Q ss_pred CeEEEEEEEcCcccceeEEEEEecCCCeeec----CCCceEEcCCCeEEEEEEE-----ecCCCceEEEeeCceeeecCC
Q psy7042 158 NGDYTCEAYNSVGFAHTSSRVKIGTPPRIDR----MPNALYIPEGDNTKVKIFY-----AGDQPMEVSLTKNGRVVQSDD 228 (2245)
Q Consensus 158 ~G~Y~C~a~n~~g~~~~~~~l~V~~~P~~~~----~~~~~~v~~G~~~~l~C~~-----~g~p~~~i~W~~~g~~l~~~~ 228 (2245)
+|.|+|.|.|..|....++.|.|..+|.+.. .|....+.+|+.+.|.|.+ .|.|.+.|+|||+|..+....
T Consensus 91 ~G~Y~C~a~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~~~ 170 (349)
T 4dep_C 91 TGNYTCMLRNTTYCSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNFN 170 (349)
T ss_dssp CEEEEEEEECSSCEEEEEEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCSCS
T ss_pred CEEEEEEEecCCceEEEEEEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEECCCcc
Confidence 9999999999999988899999988765332 2446688999999999985 778999999999999986543
Q ss_pred ceEEEEeCCeEEEEEcccCccCceeEEEEEEcCC-cce---EEEEEEEEec
Q psy7042 229 RFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSS-GSV---SGTFTINITG 275 (2245)
Q Consensus 229 ~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~-g~~---~~~~~l~V~~ 275 (2245)
. +...+ ..|.|.++..+|+|.|+|.|.|.. |.. +..+.|.|..
T Consensus 171 ~--~~~~~--~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~ 217 (349)
T 4dep_C 171 N--VIPEG--MNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVG 217 (349)
T ss_dssp S--EEEET--TEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEEC
T ss_pred c--eeecC--CEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEc
Confidence 3 33333 379999999999999999999986 443 4455555543
No 78
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.93 E-value=8.4e-25 Score=282.01 Aligned_cols=219 Identities=10% Similarity=0.044 Sum_probs=140.4
Q ss_pred eceEEECCCccCCcEEEEEEEEcCCCC-------CC--CCCccccEEEeeccCCCCCceecCCcceEEeCCCeEEEEEEE
Q psy7042 44 ECSFSVLNLVEGNDYEFRIIAVNAIGK-------SE--PSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEA 114 (2245)
Q Consensus 44 ~~~l~i~~~~~~d~G~Y~C~a~n~~g~-------~~--~~~~~~~~~v~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~ 114 (2245)
..+|.|.+++.+|+|.|+|.|.|..|. .. .......+.+.. ....+|.+...+....+.+|+.++|.|.+
T Consensus 78 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~-~~~~~P~i~~~~~~~~~~~g~~v~L~C~~ 156 (457)
T 1hzh_H 78 TAYMELRSLRSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSS-ASTKGPSVFPLAPSSKSTSGGTAALGCLV 156 (457)
T ss_dssp EEEEEECSCCGGGCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECS-CCCBCCEEEEECCCSCCCTTCCEEEEEEE
T ss_pred EEEEEECCCCcccCEEEEEEEecCCccccccccccccceECCcEEEEecC-CCCCCCeEEecCccccccCCCcEEEEEEE
Confidence 468999999999999999999988761 00 000112222221 11235666554444456899999999999
Q ss_pred eee-cC-CceEEEECCeeccCCCeEEEEEcCc----EEEEEEeeeccCCCeEEEEEEEcCcccceeEEEEEec-------
Q psy7042 115 TGT-PV-PKCRWLRNGREISSGARYRVETAGG----VFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIG------- 181 (2245)
Q Consensus 115 ~g~-p~-~~i~W~~~g~~l~~~~~~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~------- 181 (2245)
.|. |. +.|.|+|++..+.....-.....++ ...|.|.++..+| |.|+|.|.|..+.......|.+.
T Consensus 157 ~g~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~~ 235 (457)
T 1hzh_H 157 KDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKAEPKSCDKTHT 235 (457)
T ss_dssp ESBBSCCCEEEETTTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGGGTEEEEEECCCCCSCSSCS
T ss_pred eEEeCCCeEEEEEeCCEeccceEcCceECCCCCEEEEEEEEecccccCC-ceEEEEEEeCCCCcceeEEecccCCCcccc
Confidence 987 64 7899999997653211111111222 1369999999999 99999999988776555555432
Q ss_pred ----------CCCee-ecCCCceE-EcCCCeEEEEEEEecCCCc----eEEEeeCceeeecCCceEEEEe-CCe----EE
Q psy7042 182 ----------TPPRI-DRMPNALY-IPEGDNTKVKIFYAGDQPM----EVSLTKNGRVVQSDDRFKFTVL-DDY----II 240 (2245)
Q Consensus 182 ----------~~P~~-~~~~~~~~-v~~G~~~~l~C~~~g~p~~----~i~W~~~g~~l~~~~~~~~~~~-~~~----~~ 240 (2245)
.+|.+ ...|.... +.+|+.++|.|.+.|.|++ .|+|+|+|..+........... ++. ..
T Consensus 236 ~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~v~L~C~~~g~~p~p~~~~i~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~ 315 (457)
T 1hzh_H 236 CPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSV 315 (457)
T ss_dssp CCSCCCCCCSSSCEEEEECCCHHHHHCTTSCCCEEEEEECCCTTCCCCEEEEEETTEEECCCEEEEEEECTTSCEEEEEE
T ss_pred cCCCCCccccCCceEEeECcCchhhcccCCceEEEEEEEcccCCCCceEEEEEeCCccccccccccceecCCCcEEEEEE
Confidence 24554 33343333 6789999999999997653 9999999998754322111111 111 12
Q ss_pred EEEcccCccCceeEEEEEEcCCcc
Q psy7042 241 IFIKEIRKEDAGDYTVNLSNSSGS 264 (2245)
Q Consensus 241 L~i~~~~~~d~G~Y~C~a~n~~g~ 264 (2245)
|.|.....+|+|.|+|.|.|..+.
T Consensus 316 l~i~~~d~~d~G~Y~C~a~n~~~~ 339 (457)
T 1hzh_H 316 LTVLHQDWLNGKEYKCKVSNKALP 339 (457)
T ss_dssp ECCCHHHHHHTCCEEEEEECTTSS
T ss_pred EEECHHHccCCCcEEEEEeCCCCC
Confidence 222233333499999999976543
No 79
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.92 E-value=4.9e-25 Score=269.82 Aligned_cols=172 Identities=15% Similarity=0.148 Sum_probs=130.4
Q ss_pred CCcceEEeCCCeEEEEEEEeee---------cCCceEEEECCeeccCCCeEEEEEcCcEEEEEEeeeccCCCe-EEEEEE
Q psy7042 96 PLKDLVVPLGKLLTLQCEATGT---------PVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNG-DYTCEA 165 (2245)
Q Consensus 96 ~~~~~~v~~G~~v~L~C~~~g~---------p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G-~Y~C~a 165 (2245)
+...+.+.+|+.++|.|.+.+. |.+.|.|+|+|..+....+. ..++ .|.|.+++.+|+| .|+|.|
T Consensus 35 ~~~~v~v~eG~~v~L~C~~~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~---~~~~--~L~i~~v~~~D~Gs~Y~C~a 109 (329)
T 3oq3_B 35 GTMNDMAALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRPLNRR---VKNG--DLWIANYTSNDSHRRYLCTV 109 (329)
T ss_dssp EEEEEEECTTSCEEECCHHHHCTTTGGGSCCTTCEEEEEECSSSCEECSTT---EETT--EEEESSCCGGGGGCCEEEEE
T ss_pred CcceEEEECCCeEEEEccCCCCccccccccCCCCeeEEEECCCCccccCce---eecc--eEEEcCCChHhCCCcEEEEE
Confidence 3356789999999999999874 56789999999887654443 2233 5999999999999 999999
Q ss_pred EcCcccceeEEE-EEecCCCeeecCCCceEEcCCCeEEEEEEEecCC-CceEEEeeCceeeecC-CceEEEEeCCeEEEE
Q psy7042 166 YNSVGFAHTSSR-VKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQ-PMEVSLTKNGRVVQSD-DRFKFTVLDDYIIIF 242 (2245)
Q Consensus 166 ~n~~g~~~~~~~-l~V~~~P~~~~~~~~~~v~~G~~~~l~C~~~g~p-~~~i~W~~~g~~l~~~-~~~~~~~~~~~~~L~ 242 (2245)
.|..|....... +.+..+|.+...+....+.+|+.+.|.|.+.|.| .+.|+|||+|..+... .++... + ..|.
T Consensus 110 ~n~~g~~~~~~~~~v~~~~p~~~~~~~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~~~~~~~~--~--~~L~ 185 (329)
T 3oq3_B 110 TTKNGDCVQGIVRSHIRKPPSCIPETYELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIIDGTKYSQS--G--QNLI 185 (329)
T ss_dssp ECTTSCEEEEEEEEEECCCCSCEEEEEETTSSTTTCEEEECCCCSCCCCCEEEEEETTEECCCSSSSEEEE--T--TEEE
T ss_pred EeCCCceeeEEEEEEEcCCCcEeccccceEEeCCCcEEEEeccCCCCCCceEEEEECCccCCCCCceEecC--C--CEEE
Confidence 999887555433 4555666655444444567899999999999999 9999999999998633 333322 2 4799
Q ss_pred EcccCccCceeEEEEEEcC--CcceEE----EEEEEEecC
Q psy7042 243 IKEIRKEDAGDYTVNLSNS--SGSVSG----TFTINITGL 276 (2245)
Q Consensus 243 i~~~~~~d~G~Y~C~a~n~--~g~~~~----~~~l~V~~~ 276 (2245)
|.++..+|+|.|+|.|.|. .|.... .+.|.|..+
T Consensus 186 I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~ 225 (329)
T 3oq3_B 186 IHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPS 225 (329)
T ss_dssp ECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECC
T ss_pred EeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECC
Confidence 9999999999999999987 554332 355555543
No 80
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.92 E-value=2.7e-25 Score=271.56 Aligned_cols=161 Identities=16% Similarity=0.240 Sum_probs=126.8
Q ss_pred cceEEeCCCeEEEEEEEeeec-CCceEEEECCeecc----CCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEEcCcccc
Q psy7042 98 KDLVVPLGKLLTLQCEATGTP-VPKCRWLRNGREIS----SGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFA 172 (2245)
Q Consensus 98 ~~~~v~~G~~v~L~C~~~g~p-~~~i~W~~~g~~l~----~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 172 (2245)
..+.+.+|+.++|.|.+.+.| .+.|.|+|+|..+. ...++... ++ .|.|.+++.+|+|.|+|.|.|..|..
T Consensus 13 ~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~--~~--~L~i~~v~~~D~G~Y~C~a~n~~g~~ 88 (315)
T 1itb_B 13 IILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQH--KE--KLWFVPAKVEDSGHYYCVVRNSSYCL 88 (315)
T ss_dssp CCCEEETTSCCCCBCCCCSCCCSSCCCEECTTSCSCSCCCTTSSSEEC--SS--BEECTTCCGGGCSCCEECCCSSSCCC
T ss_pred eEEEEcCCCcEEEEeeccCcCCCceEEEEeCCCcCccccccCCcEecc--CC--eEEECCCChhhCEEEEEEEeCCceEE
Confidence 356889999999999999887 78999999987543 23343332 33 59999999999999999999999887
Q ss_pred eeEEEEEec-CCCeeecCC---CceEEcCCCeEEEEEEE------ecCCCceEEEeeCceeeecCCceEEEEeCCeEEEE
Q psy7042 173 HTSSRVKIG-TPPRIDRMP---NALYIPEGDNTKVKIFY------AGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIF 242 (2245)
Q Consensus 173 ~~~~~l~V~-~~P~~~~~~---~~~~v~~G~~~~l~C~~------~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~ 242 (2245)
.....+.|. .+|.+...+ ....+.+|+.+.|.|.+ .|.|.+.++|+|+|..+...... +...+. .|.
T Consensus 89 ~~~~~v~v~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~~~-~~~~~~--~L~ 165 (315)
T 1itb_B 89 RIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIH-FSGVKD--RLI 165 (315)
T ss_dssp CEECCCEEECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCSSS-EEEETT--EEE
T ss_pred EEEEEEEEeCCCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCccce-EeecCc--eEE
Confidence 777776653 455554333 34578899999999998 89999999999999998754432 222232 799
Q ss_pred EcccCccCceeEEEEEE-cCCcce
Q psy7042 243 IKEIRKEDAGDYTVNLS-NSSGSV 265 (2245)
Q Consensus 243 i~~~~~~d~G~Y~C~a~-n~~g~~ 265 (2245)
|.++..+|+|.|+|.|. |..|..
T Consensus 166 i~~v~~~d~G~Y~C~a~~n~~g~~ 189 (315)
T 1itb_B 166 VMNVAEKHRGNYTCHASYTYLGKQ 189 (315)
T ss_dssp ESSCCGGGCEEEEEEEEEEETTEE
T ss_pred EEeceehhCcEEEEEEEcCCCCcE
Confidence 99999999999999999 677765
No 81
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.92 E-value=5.2e-25 Score=270.09 Aligned_cols=175 Identities=16% Similarity=0.178 Sum_probs=126.7
Q ss_pred CCceecCCcceEEeCCCeEEEEEEEeee-cCCceEEEECCeecc---------CCCeEEEEEc-----CcEEEEEEeeec
Q psy7042 90 KPDFIVPLKDLVVPLGKLLTLQCEATGT-PVPKCRWLRNGREIS---------SGARYRVETA-----GGVFRLHFNEVT 154 (2245)
Q Consensus 90 ~P~~~~~~~~~~v~~G~~v~L~C~~~g~-p~~~i~W~~~g~~l~---------~~~~~~~~~~-----~~~~~L~i~~~~ 154 (2245)
...|+.+|..+.+.+|+.++|.|.+.+. |.+.|.|+|++..+. ...|+.+..+ .+...|.|.+++
T Consensus 3 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~ 82 (327)
T 2wng_A 3 ELQVIQPDKSVSVAAGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNIT 82 (327)
T ss_dssp CCCEECCCSEEEEETTSCEEECCEESCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCC
T ss_pred eeEEEcCCCceEEecCCcEEEEEEccCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCc
Confidence 4567788899999999999999999987 889999999886432 1124443221 334469999999
Q ss_pred cCCCeEEEEEEEcCcccc-----eeEEEEEecCCCee-ecCCCceEEcCCCeEEEEEEEecCCCc--eEEEeeCceeeec
Q psy7042 155 DVDNGDYTCEAYNSVGFA-----HTSSRVKIGTPPRI-DRMPNALYIPEGDNTKVKIFYAGDQPM--EVSLTKNGRVVQS 226 (2245)
Q Consensus 155 ~~d~G~Y~C~a~n~~g~~-----~~~~~l~V~~~P~~-~~~~~~~~v~~G~~~~l~C~~~g~p~~--~i~W~~~g~~l~~ 226 (2245)
.+|+|.|+|.|.|..+.. ...+.|.|..+|.. ...+....+.+|+.+.|.|.+.|.|++ .++|+|+|..+..
T Consensus 83 ~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~~~~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~l~~ 162 (327)
T 2wng_A 83 PADAGTYYCVKFRKGSPDTEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSD 162 (327)
T ss_dssp GGGCEEEEEEEEESSTTCEEEEECCCEEEEEEBCCCCCEEECCSSCBCTTCEEEEEEEEEEEBSSCCEEEEEETTEECCC
T ss_pred cccCeEEEEEeecCCCcceeEeecCcEEEEEEecCCCceeeccccccCCCCEEEEEEEEeCccCCCcEEEEEECCEEccc
Confidence 999999999999987642 13467888766542 111234678899999999999988765 8999999998864
Q ss_pred CCceEEEE-eC----CeEEEEEcccCccCceeEEEEEEcCCcc
Q psy7042 227 DDRFKFTV-LD----DYIIIFIKEIRKEDAGDYTVNLSNSSGS 264 (2245)
Q Consensus 227 ~~~~~~~~-~~----~~~~L~i~~~~~~d~G~Y~C~a~n~~g~ 264 (2245)
........ .+ ....|.|.....+|+|.|+|.|.|..+.
T Consensus 163 ~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~ 205 (327)
T 2wng_A 163 FQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQ 205 (327)
T ss_dssp EEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSC
T ss_pred cccccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccC
Confidence 43211110 00 1135777777777889999999987653
No 82
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.92 E-value=4.4e-25 Score=266.55 Aligned_cols=273 Identities=17% Similarity=0.248 Sum_probs=204.6
Q ss_pred CCCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECCeeccCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEEcC
Q psy7042 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNS 168 (2245)
Q Consensus 89 ~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 168 (2245)
.+|.|...+..+.+.+|+.++|.|.+.+. |.|++++.. ++.+...+....|.|.+++.+|+|.|+|.|.|.
T Consensus 3 ~~P~i~~~~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~-----~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~ 73 (292)
T 4dkd_C 3 SIPVIEPSVPELVVKPGATVTLRCVGNGS----VEWDGPPSP-----HWTLYSDGSSSILSTNNATFQNTGTYRCTEPGD 73 (292)
T ss_dssp -CCEEESCCSSCEECTTCCEEEEEECSSC----CCBCCCCCS-----SCEECCBTTEEEEEESSCCGGGCSCEEECCCC-
T ss_pred CCceecCCCCeEEEcCCCcEEEEEcCCCc----eEEccCCCC-----ceEEeccCceEEEEEcccccccCEEEEEEEccC
Confidence 58999999999999999999999999874 999976543 334444555668999999999999999999999
Q ss_pred cccceeEEEEEecCCCee-ecCCCceEEcCCCeEEEEEEEecCCC--ceEEEeeC-ceeeecCCceEEEEeCCeEEEEEc
Q psy7042 169 VGFAHTSSRVKIGTPPRI-DRMPNALYIPEGDNTKVKIFYAGDQP--MEVSLTKN-GRVVQSDDRFKFTVLDDYIIIFIK 244 (2245)
Q Consensus 169 ~g~~~~~~~l~V~~~P~~-~~~~~~~~v~~G~~~~l~C~~~g~p~--~~i~W~~~-g~~l~~~~~~~~~~~~~~~~L~i~ 244 (2245)
.|..+.++.|.|..+|.. ...+....+.+|+.+.|.|.+.+ |. +.++|+++ +..+....++.+...+ .|.|.
T Consensus 74 ~~~~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~~~~~~~~~~~~~~~---~L~i~ 149 (292)
T 4dkd_C 74 PLGGSAAIHLYVKDPARPWNVLAQEVVVFEDQDALLPCLLTD-PVLEAGVSLVRVRGRPLMRHTNYSFSPWH---GFTIH 149 (292)
T ss_dssp ---CCEEECCEECCSSCCEEESCSEEEEETTSCEECCEEESS-GGGGSSEEEEEGGGCCCCSSCCEECCSSS---CCEET
T ss_pred CCCcceEEEEEEcCccccccccCCeEEEcCCCcEEEeeeCCC-CCcceeEEEEecCCCccccCCcccccCCc---eEEEC
Confidence 988888999999998874 56677889999999999999998 54 78999997 6666555554433222 39999
Q ss_pred ccCccCceeEEEEEEcCCcce-EEEEEEEEecCCCCCCCCcccceeeccceEEEecCCCCCCCceeEEEEEEEEecCCCc
Q psy7042 245 EIRKEDAGDYTVNLSNSSGSV-SGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPH 323 (2245)
Q Consensus 245 ~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~p~~~~~~~~~~~~~~~s~~~~w~pp~~~~~~~~~~~~~~~~~~~~~~ 323 (2245)
++..+|+|.|+|.|.|..|.. +..+.|.|...+.
T Consensus 150 ~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~--------------------------------------------- 184 (292)
T 4dkd_C 150 RAKFIQSQDYQCSALMGGRKVMSISIRLKVQKVIP--------------------------------------------- 184 (292)
T ss_dssp TCCGGGCSEEEEEECSTTSCEECCCEEEEEECCCC---------------------------------------------
T ss_pred CCCHHHCeEEEEEEEeCCCceeEEEEEEEEeCCCC---------------------------------------------
Confidence 999999999999999877654 2355565543211
Q ss_pred eEEeeeccCcceEEEcCCCCCCEEEEEEEEEecCCCCCCCCCCCceecCCCCCCCCCCCCcEEEeecCCeeEEEecCCCC
Q psy7042 324 WICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLD 403 (2245)
Q Consensus 324 ~~~~~~~~~~~~~~i~~l~~~~~~~~~c~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~v~~~~~~~~~l~W~~~~~ 403 (2245)
T Consensus 185 -------------------------------------------------------------------------------- 184 (292)
T 4dkd_C 185 -------------------------------------------------------------------------------- 184 (292)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCccEEEEEeeecCCCCcEEEeeeecCCceeecCCcccCceEEEEEEeecCCCCCCCCCCCCcEEecCCcccCCCce
Q psy7042 404 DGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEI 483 (2245)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~s~~~~~v~~~~~~~~~~p~~ 483 (2245)
.+|.+
T Consensus 185 ---------------------------------------------------------------------------~~p~i 189 (292)
T 4dkd_C 185 ---------------------------------------------------------------------------GPPAL 189 (292)
T ss_dssp ---------------------------------------------------------------------------SSCEE
T ss_pred ---------------------------------------------------------------------------CCCeE
Confidence 12333
Q ss_pred eccccccccccccceeeEEEEeccCc-CeEEEEeCCeecCCCccEEEEee--CCeEEEEEecccccCCceEEEEEEeCCC
Q psy7042 484 IVPLRNANAIQNHNAQFQCTITGCPK-PTISWLKGSREITPSARHHIFAE--GDTYTLIINSVYGVDADEYVCRAVNKGG 560 (2245)
Q Consensus 484 ~~~~~~~~~~~g~~~~l~C~~~g~p~-~~v~W~~~~~~i~~~~~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~a~n~~g 560 (2245)
...+....+.+|+.+.|.|.+.+.|. +.+.|++++..+........... .....|.|.++..+|+|.|+|.|.|..|
T Consensus 190 ~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g 269 (292)
T 4dkd_C 190 TLVPAELVRIRGEAAQIVCSASSVDVNFDVFLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQG 269 (292)
T ss_dssp EEESSCBCCCSSSCEEEEEEEEESSSCCEEECCBSSCCCCCCBEEEEETTEEEEEEEEEESSCCTTSCEEEEEEEECSSC
T ss_pred EccCCceeEecCCCEEEEEEecCCCCceEEEEeCCCcccccCccceeccceeeeEEEEEECccChhcCeEEEEEEecCCC
Confidence 33334455568999999999998664 57899999887765443322211 1234899999999999999999999999
Q ss_pred CCCcceeEeEecCC
Q psy7042 561 VKSTKAELIIMTAP 574 (2245)
Q Consensus 561 ~~~~~~~l~v~~~p 574 (2245)
..+.++.|.|....
T Consensus 270 ~~~~~~~l~V~~~~ 283 (292)
T 4dkd_C 270 KHSTSMFFRVVESA 283 (292)
T ss_dssp EEEEEEEECC----
T ss_pred CceeEEEEEEeeCC
Confidence 99999999887653
No 83
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=99.92 E-value=3.3e-23 Score=259.13 Aligned_cols=307 Identities=19% Similarity=0.249 Sum_probs=227.9
Q ss_pred CCCCCcccEEeeeeCc-eEEEEecCCCCCCCCccceEEEeeeecCCCc---eEEecceeeeceEEEecCCCCceeeEEEE
Q psy7042 901 RPHPPENLHADEFAGD-SLTLYWTPPRDNGGSEITNYVVEKKDYNSTV---WTKVSSYVTTPFVRVRNLAIGSTYEFRVM 976 (2245)
Q Consensus 901 ~P~~p~~l~~~~~~~~-~~~l~W~~p~~~~g~~i~~y~i~~~~~~~~~---~~~~~~~~~~~~~~i~~L~p~~~y~~~v~ 976 (2245)
+|.+|.+|.+.....+ ++.|+|+++.. ..+.+|.|+++...... |.. ........+.+.+|.|++.|.|+|+
T Consensus 1 Pp~~P~~l~~~~~~~~~sv~l~W~~~~~---~~i~~Y~v~~~~~~~~~~~~~~~-~~~~~~~~~~i~~L~p~t~Y~~~V~ 76 (368)
T 1fnf_A 1 PLSPPTNLHLEANPDTGVLTVSWERSTT---PDITGYRITTTPTNGQQGNSLEE-VVHADQSSCTFDNLSPGLEYNVSVY 76 (368)
T ss_dssp CCCCCEEEEEEECSSSSCEEEEEECCSC---SSCCEEEEEEEETTTCSSCCEEE-EECTTCCEEECCCCCTTSCEEEEEE
T ss_pred CCCCCcceEEEecCCCcEEEEEEeCCCC---CCceEEEEEEEECCCCCCceeEE-EecCCcCEEEECCCCCCCEEEEEEE
Confidence 6899999999988776 59999999862 37999999999765532 332 2334667899999999999999999
Q ss_pred EEeccccCCCccccCcccccCCCCCCCCCCCCeeEeecCCeEEEEecCCCCCCCCccceEEEEEEecCCc-cceeccccc
Q psy7042 977 AENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDD-KWIKASMAH 1055 (2245)
Q Consensus 977 a~n~~g~~~~s~~~~~~~~~t~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~-~~~~~~~~~ 1055 (2245)
|.|..|.+.+.. ..+... |.+|.++++...+.+++.|+|++|.. +++.+|.|+|+..++. .|.......
T Consensus 77 a~~~~g~s~~~~------~~~~~~-~~~p~~l~~~~~~~~si~l~W~~p~~---~~~~~Y~v~~~~~~~~~~~~~~~~~~ 146 (368)
T 1fnf_A 77 TVKDDKESVPIS------DTIIPA-VPPPTDLRFTNIGPDTMRVTWAPPPS---IDLTNFLVRYSPVKNEEDVAELSISP 146 (368)
T ss_dssp EEETTEECCCEE------EEECCC-CCCCEEEEEESCCSSCEEEEEECCTT---CCCSEEEEEEEETTCTTCCEEEEECT
T ss_pred EEcCCCccCcee------eeecCC-CcCCceeEEEEcCCCeEEEEeeCCCC---CCCcEEEEEEEECCCCCccEEEEcCC
Confidence 999999776531 112222 34788999988899999999999842 4589999999876543 333322211
Q ss_pred cCCcceeEEEEeecccccCCccCchhhhhhhhhcccccccccccCCcEEEEEEEEEecCCCCCCCCCCcceeecCCCCCC
Q psy7042 1056 IPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSDIIMCCAPPCAP 1135 (2245)
Q Consensus 1056 ~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~v~A~n~~G~~~~s~~~~~~~~~~~p~~p 1135 (2245)
... .+++.+|.+++.|.|+|+|.|..|.+.+. .. .
T Consensus 147 ---~~~------------------------------~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~---~~-~-------- 181 (368)
T 1fnf_A 147 ---SDN------------------------------AVVLTNLLPGTEYVVSVSSVYEQHESTPL---RG-R-------- 181 (368)
T ss_dssp ---TCC------------------------------EEEECSCCTTCEEEEEEEEEETTEECCCE---EE-E--------
T ss_pred ---Ccc------------------------------eEEecCCCCCCEEEEEEEEEeCCCCCCCe---Ee-e--------
Confidence 111 12699999999999999999988754310 00 0
Q ss_pred ccccCCCceeEEEEcCCeEEEEEEeeecCCCcceEEeCCeecCCCCcEEEEEccceEEEEecCccccccceeEEEEEEcC
Q psy7042 1136 KITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQLVNT 1215 (2245)
Q Consensus 1136 ~~~~~~~~~~~~v~~~~~~~l~~~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~a~n~ 1215 (2245)
T Consensus 182 -------------------------------------------------------------------------------- 181 (368)
T 1fnf_A 182 -------------------------------------------------------------------------------- 181 (368)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcceeEEEEEEEECCCCCCCCCceeeeccCCcEEEEecCCCCCCCcceeeeEEEEeeccc-cceEEcccceecceEEecC
Q psy7042 1216 VGSDSASCKVYVVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESAT-GFWSKLSSFVRSPAYDVFG 1294 (2245)
Q Consensus 1216 ~g~~~~s~~~~v~~~p~~p~~~~~~~~~~~~s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~-~~~~~~~~~~~~~~~~l~~ 1294 (2245)
..+.|.+| .++.+...+.+++.|+|++|. + .+.+|.|++..... +.+.........+++.+.+
T Consensus 182 -----------~~~~~~~P-~~l~~~~~~~~sv~l~W~~p~---~-~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~ 245 (368)
T 1fnf_A 182 -----------QKTGLDSP-TGIDFSDITANSFTVHWIAPR---A-TITGYRIRHHPEHFSGRPREDRVPHSRNSITLTN 245 (368)
T ss_dssp -----------EECCCCCC-EEEEEESCCSSEEEEEEECCS---S-CCSEEEEEEECSCCSSCCEEEEEETTCCEEEEES
T ss_pred -----------ecCCCCCC-CccEEEEccCCEEEEEEeCCC---C-CcCEEEEEEecCCCCCCccEEEeCCCcCEEEECC
Confidence 00122222 346677777889999999874 2 38999999886643 3445555556778899999
Q ss_pred CCCCceEEEEEEEeccccCCCCcccCCcccccCCCCCCCCCCCCeeeeccCCcEEEEeeCCCCCCCccceeeEEEEecC
Q psy7042 1295 LETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTP 1373 (2245)
Q Consensus 1295 L~~~t~Y~~~v~A~n~~G~~~~s~~~~~~~~~~~~~~p~~p~~~~~~~~~~~s~~l~W~~p~~~~g~~i~~y~i~~~~~ 1373 (2245)
|.+++.|.|+|+|.|..|.|.++... ..+.|.+|.++.+..++.+++.|+|.+|.. ++.+|.|.|+..
T Consensus 246 L~p~t~Y~~~V~A~n~~g~~~~~~~~-------~~t~p~~P~~l~~~~~~~~sv~l~W~~p~~----~i~~Y~v~~~~~ 313 (368)
T 1fnf_A 246 LTPGTEYVVSIVALNGREESPLLIGQ-------QSTVSDVPRDLEVVAATPTSLLISWDAPAV----TVRYYRITYGET 313 (368)
T ss_dssp CCTTCEEEEEEEEEETTEECCCEEEE-------EECCCCSCEEEEEEEEETTEEEEEEECCSS----CCSEEEEEEEET
T ss_pred CCCCCEEEEEEEEEeCCccCCccccc-------ccCCCCCCCeeEEEecCCCEEEEEeeCCCC----ccceEEEEEEEC
Confidence 99999999999999999988764321 235678888999999999999999998753 588999998754
No 84
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.92 E-value=3.1e-23 Score=268.82 Aligned_cols=412 Identities=13% Similarity=0.174 Sum_probs=237.3
Q ss_pred CCcceEEeCCCeEEEEEEEeeecC----CceEEEEC--Ceecc----------------CCCeEEEEEc--CcEEEEEEe
Q psy7042 96 PLKDLVVPLGKLLTLQCEATGTPV----PKCRWLRN--GREIS----------------SGARYRVETA--GGVFRLHFN 151 (2245)
Q Consensus 96 ~~~~~~v~~G~~v~L~C~~~g~p~----~~i~W~~~--g~~l~----------------~~~~~~~~~~--~~~~~L~i~ 151 (2245)
.|..+.+.+|+.++|.|.+.+.+. ..|.|+|+ |..+. ..+|+.+..+ ++..+|.|.
T Consensus 6 qp~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 85 (512)
T 1zvo_C 6 ESGPGLVKPSETLSLTCIVSGGPIRRTGYYWGWIRQPPGKGLEWIGGVYYTGSIYYNPSLRGRVTISVDTSRNQFSLNLR 85 (512)
T ss_pred CCCCEEEcCCCCEEEEEEEcccccCCCCeeEEEEEeCCCCCcEEEEEEecCCCEEECCccCCceEEEecCCCCEEEEEEC
Confidence 355678999999999999987543 67999985 32110 1347776643 346789999
Q ss_pred eeccCCCeEEEEEEEcCcc-----------c--ceeEEEEEecC----CCeeec-CCCceEEcCCCeEEEEEEEecC-CC
Q psy7042 152 EVTDVDNGDYTCEAYNSVG-----------F--AHTSSRVKIGT----PPRIDR-MPNALYIPEGDNTKVKIFYAGD-QP 212 (2245)
Q Consensus 152 ~~~~~d~G~Y~C~a~n~~g-----------~--~~~~~~l~V~~----~P~~~~-~~~~~~v~~G~~~~l~C~~~g~-p~ 212 (2245)
+++.+|+|.|.|.+.+..+ . ....+.|+|.. +|.+.. .+.......|+.++|.|.+.|. |.
T Consensus 86 ~v~~~Dsg~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~~~~~v~L~C~~~g~~P~ 165 (512)
T 1zvo_C 86 SMSAADTAMYYCARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPTKAPDVFPIISGCRHPKDNSPVVLACLITGYHPT 165 (512)
T ss_pred cCCHHHCEEEEEEEECCCCccccccccccccccccCceEEEecccCCcCCeEEeccCCcccccCCCeEEEEEEEEeeecC
Confidence 9999999999999998642 1 12345678763 455442 2222212347899999999886 75
Q ss_pred c-eEEEeeCceeeec-CCceEEEEeC---CeEEEEEcccCccCceeEEEEEEcCCcceEEEE-----------EEEEecC
Q psy7042 213 M-EVSLTKNGRVVQS-DDRFKFTVLD---DYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTF-----------TINITGL 276 (2245)
Q Consensus 213 ~-~i~W~~~g~~l~~-~~~~~~~~~~---~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~-----------~l~V~~~ 276 (2245)
+ .|+|++++..... .........+ ..+.|.|.....+ .|.|+|.|.|..+.....+ .+.|..+
T Consensus 166 p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~-~g~ytC~v~n~~~~~~~~~~~~~~~~~~~~~v~l~~p 244 (512)
T 1zvo_C 166 SVTVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWR-QGEYKCVVQHTASKSKKEIFRWPESPKAQASSVPTAQ 244 (512)
T ss_pred ceEEEEEcCcccCceEecCceecCCCCEEEEEEEEEcHHHcC-CceEEEEEEeCCCCceEEEecCCCCCCcCCEEEEeCC
Confidence 4 8999997653210 0000001111 1235888887777 9999999999998765554 1222222
Q ss_pred CCCCCCCcccceeeccceEEEecCCCCCCCceeEEEEEEEEecCCCceEEeeeccCcceEEEcCCCCCCEEEEEEEEEec
Q psy7042 277 PGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNE 356 (2245)
Q Consensus 277 p~~~~~~~~~~~~~~~s~~~~w~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~c~a~n~ 356 (2245)
|..... + .. +.-.|. . .+. |
T Consensus 245 p~~~~~-~--~~-------~~~~~~--------~-----~~~-------------------------g------------ 264 (512)
T 1zvo_C 245 PQAEGS-L--AK-------ATTAPA--------T-----TRN-------------------------T------------ 264 (512)
T ss_pred Cchhcc-c--cc-------cccCch--------h-----hcc-------------------------C------------
Confidence 210000 0 00 000000 0 000 0
Q ss_pred CCCCCCCCCCCceecCCCCCCCCCCCCcEEEeecCCeeEEEecCCCCCCCCCccEEEEEeeecCCCCcEEEeeeecCCce
Q psy7042 357 NGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQ 436 (2245)
Q Consensus 357 ~g~~~~~~~~~~~~~~~~~~~p~~~~~~~v~~~~~~~~~l~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (2245)
+.. ....+|.++. . ... ...
T Consensus 265 -~~~--------------------------------~~~~~~~~~~---~------------~h~------------~~~ 284 (512)
T 1zvo_C 265 -GRG--------------------------------GEEKKKEKEK---E------------EQE------------ERE 284 (512)
T ss_pred -ccc--------------------------------ccceeccCCc---c------------ccc------------ccC
Confidence 000 0011222110 0 000 000
Q ss_pred eecCCcccCceEEEEEEeecCCCCCCCCCCCCcEEecCCcccCCCce-eccccccccccccceeeEEEEecc-C-cCeEE
Q psy7042 437 INIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEI-IVPLRNANAIQNHNAQFQCTITGC-P-KPTIS 513 (2245)
Q Consensus 437 l~i~~l~~~~~g~y~c~a~n~~g~~~~s~~~~~v~~~~~~~~~~p~~-~~~~~~~~~~~g~~~~l~C~~~g~-p-~~~v~ 513 (2245)
.. .+.| .+ ...+|.+ +..+....+.+|+.+.|.|.+.|. | ...|+
T Consensus 285 ~~----------~~~~-----~~-----------------~~~~p~v~~~~p~~~~~~~g~~~~L~C~v~g~~P~~~~i~ 332 (512)
T 1zvo_C 285 TK----------TPEC-----PS-----------------HTQPLGVYLLTPAVQDLWLRDKATFTCFVVGSDLKDAHLT 332 (512)
T ss_pred cc----------cccC-----CC-----------------CCCCCEEEEECCChHHhccCCceEEEEEEeceECCCeEEE
Confidence 00 0112 00 1123443 334445567789999999999985 3 24899
Q ss_pred EEeCCeecCCCcc---EEEEeeCC---eEEEEEecccccCCceEEEEEEeCCCCCCcceeEeEe------cCCCCCCCCC
Q psy7042 514 WLKGSREITPSAR---HHIFAEGD---TYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIM------TAPKFNVPPR 581 (2245)
Q Consensus 514 W~~~~~~i~~~~~---~~~~~~~~---~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~------~~p~~~~~p~ 581 (2245)
|+|+|..+..... .....+|. ...|.|..+..+|.|.|+|.|.|..+... ...+... .+|.+...+.
T Consensus 333 W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~~~~~~-~~~~~~~~~~~~~~~p~v~~~~~ 411 (512)
T 1zvo_C 333 WEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHPSLPPQ-RLMALREPAAQAPVKLSLNLLAS 411 (512)
T ss_pred EEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEeCCCCCC-ceeEEeecCCCCCCCCEEEEEcc
Confidence 9999988652211 11111221 23699999999999999999999887654 3333221 2233221111
Q ss_pred cccceEeeCCCeEE-EEEeeeecCC--CeEEEEeCCeEeeccCeEE--EEec-CC-----eEEEEEcCCCCCcCEEEEEE
Q psy7042 582 FRDTAYFDKGENVV-VKIPFTGYPK--PKITWYRDNEVIESGGHFH--VETS-ER-----HAILTIRDASNVDTAPYRVV 650 (2245)
Q Consensus 582 ~~~~~~~~~g~~~~-l~C~~~g~p~--~~i~W~~~~~~~~~~~~~~--~~~~-~~-----~~~l~i~~~~~~d~g~y~C~ 650 (2245)
...|+.+. |.|.+.|.++ ..|+|+|+|..+....... +... +. ...|.|.....+|.|.|+|.
T Consensus 412 ------~~~~~~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~~~~dg~~~~~~s~L~v~~~~~~~~g~YtC~ 485 (512)
T 1zvo_C 412 ------SDPPEAASWLLCEVSGFSPPNILLMWLEDQREVNTSGFAPARPPPQPGSTTFWAWSVLRVPAPPSPQPATYTCV 485 (512)
T ss_pred ------CcCCCCceEEEEEEeeeCCCCcEEEEEECCeECcCccccccceeECCCCCEEEEEEEEEECchhcCCCCeEEEE
Confidence 01588899 9999998644 3689999999886542211 1111 11 14577777777789999999
Q ss_pred EEeCCCCce--eEEEEEee
Q psy7042 651 AENDLGMDS--AIVKIQIS 667 (2245)
Q Consensus 651 a~n~~g~~~--~~~~l~v~ 667 (2245)
|.|...... ....+.+.
T Consensus 486 v~h~~l~~~~~~~~~~~v~ 504 (512)
T 1zvo_C 486 VSHEDSRTLLNASRSLEVS 504 (512)
T ss_pred EEecCCCCceEEEEEEEec
Confidence 999876543 33444443
No 85
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.92 E-value=1.3e-25 Score=277.51 Aligned_cols=182 Identities=14% Similarity=0.196 Sum_probs=143.1
Q ss_pred CCCceeccCCceEEcCCCeEEEEEEec-------CcCCCeEEEeeCCEec--cCCceEEEEecCcEEEEEEeeeccCCCe
Q psy7042 1696 EKPDFIVPLKDLVVPLGKLLTLQCEAT-------GTPVPKCRWLRNGREI--SSGARYRVETAGGVFRLHFNEVTDVDNG 1766 (2245)
Q Consensus 1696 ~~p~~~~~~~~~~~~~G~~v~L~C~~~-------~~p~~~v~W~~~~~~l--~~~~~~~~~~~~~~~~L~i~~v~~~d~G 1766 (2245)
..|.|...+.++.+.+|+++.|.|.+. +.|.+.+.|++++..+ ....+.++...++ +|.|.+++.+|+|
T Consensus 17 ~~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~--~L~i~~v~~~D~G 94 (339)
T 3o4o_C 17 SCRFRGRHYKREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWAQDG--ALWLLPALQEDSG 94 (339)
T ss_dssp -CEEEEECSCCEEEETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSCCSSSCEEEETT--EEEESSBCTTCCE
T ss_pred hhHhhCcCceEEEEECCccEEEEeccccccccccCCCCceEEEEECCCCcccCccccccEEeeCC--eEEECCCCcccCE
Confidence 467888888899999999999999998 8899999999999874 3322223333344 4999999999999
Q ss_pred EEEEEEecCceeeEEEEEEEecCCCccc--cCCCceEEcCCCeEEEEEE-----EeccCCcEEEEEECCEEeecC-CceE
Q psy7042 1767 DYTCEAYNSVGFAHTSSRVKIGTPPRID--RMPNALYIPEGDNTKVKIF-----YAGDQPMEVSLTKNGRVVQSD-DRFK 1838 (2245)
Q Consensus 1767 ~Y~C~~~n~~g~~~~~~~l~V~~~p~~~--~~~~~~~~~~g~~~~l~C~-----~~~~p~~~v~W~~~g~~l~~~-~~~~ 1838 (2245)
.|+|.+.|..|.....+.|.|..+|... .......+.+|+.+.|.|. +.|.|.+.+.|+++|..+... .++
T Consensus 95 ~Y~C~~~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~~~~- 173 (339)
T 3o4o_C 95 TYVCTTRNASYCDKMSIELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNEKF- 173 (339)
T ss_dssp EEECCEEETTEEEEEEEEEEEECSCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTCSSE-
T ss_pred EEEEEEECCcceEEEEEEEEEEcCCCccccccccceEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCCCCcee-
Confidence 9999999999988889999998876542 2233457889999999999 788999999999999988655 333
Q ss_pred EEEcCCeEEEEEcccCcccceEEEEEEEcCCee----eEEEEEEEEe
Q psy7042 1839 FTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGS----VSGTFTINIT 1881 (2245)
Q Consensus 1839 ~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~----~~~~~~l~v~ 1881 (2245)
....+...|.|.++..+|+|.|+|.|.|..|. .+..+.|.|.
T Consensus 174 -~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~ 219 (339)
T 3o4o_C 174 -LSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIK 219 (339)
T ss_dssp -EECTTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEE
T ss_pred -EEcCCcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEE
Confidence 22333348999999999999999999998773 3444445443
No 86
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.92 E-value=5.6e-25 Score=273.12 Aligned_cols=170 Identities=13% Similarity=0.156 Sum_probs=130.5
Q ss_pred CCceEEcCCCeEEEEEEecCcCC-----------CeEEEeeCCEe------cc---CCceEEEEecCcEEEEEEeeeccC
Q psy7042 1704 LKDLVVPLGKLLTLQCEATGTPV-----------PKCRWLRNGRE------IS---SGARYRVETAGGVFRLHFNEVTDV 1763 (2245)
Q Consensus 1704 ~~~~~~~~G~~v~L~C~~~~~p~-----------~~v~W~~~~~~------l~---~~~~~~~~~~~~~~~L~i~~v~~~ 1763 (2245)
...+.+.+|+++.|.|.+.+.|. +.+.|+|++.. +. ...++. ..++ .|.|.+++.+
T Consensus 14 ~~~v~v~~G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~--~~~~--~L~i~~~~~~ 89 (349)
T 4dep_C 14 MRQIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRIS--KEKD--VLWFRPTLLN 89 (349)
T ss_dssp CCCCEEETTSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCEE--EETT--EEEESSCCGG
T ss_pred eeeEEEecCCeEEEEccccccccccccccccCCCceEEEEECCCCCcccccccccccCceEe--ecCC--EEEEccCChh
Confidence 45678999999999999987654 89999998842 21 122332 2333 4999999999
Q ss_pred CCeEEEEEEecCceeeEEEEEEEecCCCcccc----CCCceEEcCCCeEEEEEEE-----eccCCcEEEEEECCEEeecC
Q psy7042 1764 DNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDR----MPNALYIPEGDNTKVKIFY-----AGDQPMEVSLTKNGRVVQSD 1834 (2245)
Q Consensus 1764 d~G~Y~C~~~n~~g~~~~~~~l~V~~~p~~~~----~~~~~~~~~g~~~~l~C~~-----~~~p~~~v~W~~~g~~l~~~ 1834 (2245)
|+|.|+|.+.|..+....++.|.|..+|.+.. .+....+.+|+.+.|.|.+ .|.|.+.+.|+|+|+.+...
T Consensus 90 D~G~Y~C~a~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~~ 169 (349)
T 4dep_C 90 DTGNYTCMLRNTTYCSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNF 169 (349)
T ss_dssp GCEEEEEEEECSSCEEEEEEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCSC
T ss_pred hCEEEEEEEecCCceEEEEEEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEECCCc
Confidence 99999999999999888899999988765432 2345678899999999985 77899999999999988654
Q ss_pred CceEEEEcCCeEEEEEcccCcccceEEEEEEEcCC-eee---EEEEEEEEe
Q psy7042 1835 DRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSS-GSV---SGTFTINIT 1881 (2245)
Q Consensus 1835 ~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~-g~~---~~~~~l~v~ 1881 (2245)
.++ ...+ ..|.|.++..+|+|.|+|.|.|.. |.. +..+.|.|.
T Consensus 170 ~~~--~~~~--~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~ 216 (349)
T 4dep_C 170 NNV--IPEG--MNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVV 216 (349)
T ss_dssp SSE--EEET--TEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEE
T ss_pred cce--eecC--CEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEE
Confidence 332 2222 479999999999999999999986 443 344444443
No 87
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.92 E-value=3e-24 Score=253.81 Aligned_cols=167 Identities=18% Similarity=0.240 Sum_probs=127.1
Q ss_pred CCCCceecCCcceEEeCCCeEEEEEEEee-ecCC--ceEEEECCeeccCCCeEEEEEcCcEEEEEEeee---ccCCCeE-
Q psy7042 88 GEKPDFIVPLKDLVVPLGKLLTLQCEATG-TPVP--KCRWLRNGREISSGARYRVETAGGVFRLHFNEV---TDVDNGD- 160 (2245)
Q Consensus 88 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~g-~p~~--~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~---~~~d~G~- 160 (2245)
..+|.+..+. .+.+|+.++|.|.+.| .|.+ .|.|+|+|..+.. .+...++. |.|..+ +.+|+|.
T Consensus 4 ~~~p~~~~~~---~v~~G~~v~l~C~~~g~~p~p~~~v~W~k~~~~l~~----~~~~~~~~--~~~~~~~~~~~~d~g~g 74 (265)
T 2oz4_A 4 ATPPQLVSPR---VLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP----TVTYGNDS--FSAKASVSVTAEDEGTQ 74 (265)
T ss_dssp SSCCEEECCS---EEETTEEEEEEEEEESCSCGGGCEEEEEETTEECCC----EEEECSSE--EEEEEEEEECGGGCEEE
T ss_pred CCCCccccCc---eEecCCCEEEEEEccCCCCCcceEEEEEeCCEECCc----eEeeCCCe--EEEEeecccccccCCcc
Confidence 4566666543 6899999999999998 7876 9999999999875 23344443 555544 7788885
Q ss_pred -EEEEEEcCcccceeEEEEEecCCCeeecCCCceEEcCCCeEEEEEEEecCCCceEEEeeCceeeecCCceEEEEeCCeE
Q psy7042 161 -YTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYI 239 (2245)
Q Consensus 161 -Y~C~a~n~~g~~~~~~~l~V~~~P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~ 239 (2245)
|+|.|.|..|..+.++.|.|...|.....+....+.+|+.++|.|.+. |.+.|+| +|..+... +...
T Consensus 75 ~Y~C~a~n~~~~~~~~~~l~V~~~p~p~~~~~~~~v~~G~~v~l~C~~~--p~~~i~W--~g~~~~~~--------~~~~ 142 (265)
T 2oz4_A 75 RLTCAVILGNQSQETLQTVTIYSFPAPNVILTKPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQPL--------GPRA 142 (265)
T ss_dssp EEEEEEEETTEEEEEEEEEEEECCCCCEEEESCSEEETTCEEEEEEECC--TTSEEEE--SSCSSSCC--------SSEE
T ss_pred eEEEEEecCCCCcEEEEEEEEeCCCCceeecCCceecCCCcEEEEEEcc--CCCEEEE--CCEEccCC--------CCcE
Confidence 999999999998889999997744333334566788999999999988 8999999 88877332 2335
Q ss_pred EEEEcccCccCceeEEEEEEcCC-cceE---EEEEEEEec
Q psy7042 240 IIFIKEIRKEDAGDYTVNLSNSS-GSVS---GTFTINITG 275 (2245)
Q Consensus 240 ~L~i~~~~~~d~G~Y~C~a~n~~-g~~~---~~~~l~V~~ 275 (2245)
.|.|..+..+|+|.|+|.|.|.. |... ..+.|.|..
T Consensus 143 ~l~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~ 182 (265)
T 2oz4_A 143 QLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLY 182 (265)
T ss_dssp CCEEECCGGGTTEEEEEEEEEECSSSEEEEEEEEEEEEEE
T ss_pred EEEEccccccCCceEEEEEEcCCCCCcccccccEEEEEEe
Confidence 68899999999999999998544 6554 455566543
No 88
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.92 E-value=1.5e-24 Score=267.20 Aligned_cols=273 Identities=15% Similarity=0.199 Sum_probs=199.3
Q ss_pred CCCceecCCcceEEeCCCeEEEEEEEeee----cCCceEEEECC--ee-------------c--cCCCeEEEE-EcCcEE
Q psy7042 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGT----PVPKCRWLRNG--RE-------------I--SSGARYRVE-TAGGVF 146 (2245)
Q Consensus 89 ~~P~~~~~~~~~~v~~G~~v~L~C~~~g~----p~~~i~W~~~g--~~-------------l--~~~~~~~~~-~~~~~~ 146 (2245)
.++.+...+..+.+.+|+.++|.|.+.+. +.+.|.|+|++ .. + ...+|+.+. ...+..
T Consensus 13 ~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 92 (331)
T 3u83_A 13 DPSQVVQVNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDG 92 (331)
T ss_dssp --------CEEEEEETTCCEEECCBCSSCCSSCEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESSCSSSBC
T ss_pred CCcceEEcCCcEEEEecCCEEEeeecCCCCCCCceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecccCCCCc
Confidence 34555667788999999999999999876 55679999954 11 1 123455543 122334
Q ss_pred EEEEeeeccCCCeEEEEE-EEcCcccceeEEEEEecCCCeee--cCCCceEEcCC---CeEEEEEE-EecCCCceEEEee
Q psy7042 147 RLHFNEVTDVDNGDYTCE-AYNSVGFAHTSSRVKIGTPPRID--RMPNALYIPEG---DNTKVKIF-YAGDQPMEVSLTK 219 (2245)
Q Consensus 147 ~L~i~~~~~~d~G~Y~C~-a~n~~g~~~~~~~l~V~~~P~~~--~~~~~~~v~~G---~~~~l~C~-~~g~p~~~i~W~~ 219 (2245)
+|.|.+++.+|+|.|+|. +.+..|.....+.|.|..+|.+. ..+....+.+| +.+.|.|. +.|.|.+.+.|+|
T Consensus 93 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~ 172 (331)
T 3u83_A 93 TIRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWET 172 (331)
T ss_dssp CEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCCEEEEEE
T ss_pred eEEEcccCcccCcEEEEEEEecCCCccEEEEEEEEecCCcceeecCCCceeecCCCccceEEEEEEecCCcCCceEEEEc
Confidence 699999999999999998 55667878888999999998764 35677888999 88999998 7899999999999
Q ss_pred Cceeee-------cCCceEEEEeCCeEEEEEcccCccCceeEEEEEEcCCcceEEEEEEEEecCCCCCCCCcccceeecc
Q psy7042 220 NGRVVQ-------SDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKH 292 (2245)
Q Consensus 220 ~g~~l~-------~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~ 292 (2245)
++.... ....+.+ ...|.|.++..+|+|.|+|.|.|..|..+.++.|.|..+|...
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~-----~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~P~~~------------ 235 (331)
T 3u83_A 173 RLKGEAEYQEIRNPNGTVTV-----ISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQYEPEVT------------ 235 (331)
T ss_dssp SSCCEEEEEEEECTTSCEEE-----EEEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEEEEEEEE------------
T ss_pred CCCCccccceeECCCCcEEE-----EEEEEEEeccccCCCEEEEEEecCCCcceeeEEEEEecCCeEE------------
Confidence 533221 1111111 2369999999999999999999999887777777665332100
Q ss_pred ceEEEecCCCCCCCceeEEEEEEEEecCCCceEEeeeccCcceEEEcCCCCCCEEEEEEEEEecCCCCCCCCCCCceecC
Q psy7042 293 TCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAK 372 (2245)
Q Consensus 293 s~~~~w~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~c~a~n~~g~~~~~~~~~~~~~~ 372 (2245)
T Consensus 236 -------------------------------------------------------------------------------- 235 (331)
T 3u83_A 236 -------------------------------------------------------------------------------- 235 (331)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCCCcEEEeecCCeeEEEecCCCCCCCCCccEEEEEeeecCCCCcEEEeeeecCCceeecCCcccCceEEEEE
Q psy7042 373 SPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRV 452 (2245)
Q Consensus 373 ~~~~~p~~~~~~~v~~~~~~~~~l~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c 452 (2245)
T Consensus 236 -------------------------------------------------------------------------------- 235 (331)
T 3u83_A 236 -------------------------------------------------------------------------------- 235 (331)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EeecCCCCCCCCCCCCcEEecCCcccCCCceeccccccccccccceeeEEEEeccCcCe-EEEEeCCeecCCCccEEEEe
Q psy7042 453 YAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPT-ISWLKGSREITPSARHHIFA 531 (2245)
Q Consensus 453 ~a~n~~g~~~~s~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~-v~W~~~~~~i~~~~~~~~~~ 531 (2245)
...+....+.+|+.+.|.|.+.|.|.+. +.|++++..+..... ..
T Consensus 236 -------------------------------~~~~~~~~~~~g~~~~l~C~~~g~p~p~~i~W~~~~~~~~~~~~---~~ 281 (331)
T 3u83_A 236 -------------------------------IEGFDGNWYLQRMDVKLTCKADANPPATEYHWTTLNGSLPKGVE---AQ 281 (331)
T ss_dssp -------------------------------EECCCSCCBTTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTEE---EE
T ss_pred -------------------------------EecCCCceEeCCCeEEEEEeCcCCCCCCEEEEEECCCcccccce---ec
Confidence 0001123356789999999999999998 999999998865522 12
Q ss_pred eCCeEEEEEe-cccccCCceEEEEEEeCCCCCCcceeEeEecCCC
Q psy7042 532 EGDTYTLIIN-SVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPK 575 (2245)
Q Consensus 532 ~~~~~~L~i~-~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~ 575 (2245)
++ .|.|. ++..+|+|.|+|.|.|..|....++.|.|...+.
T Consensus 282 ~~---~L~i~~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~ 323 (331)
T 3u83_A 282 NR---TLFFKGPINYSLAGTYICEATNPIGTRSGQVEVNITEAAA 323 (331)
T ss_dssp TT---EEEECSCCCGGGCEEEEEEEEETTEEEEEEEEECCBC---
T ss_pred Cc---EEEEeCCCccccCeEEEEEEEeccccceEEEEEEEeccch
Confidence 22 79999 9999999999999999999998899999887654
No 89
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.92 E-value=3e-24 Score=261.53 Aligned_cols=169 Identities=17% Similarity=0.153 Sum_probs=126.0
Q ss_pred CCCCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECCeeccCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEEc
Q psy7042 88 GEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYN 167 (2245)
Q Consensus 88 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 167 (2245)
..+|.|...|. ..+.+|++++|.|.+.+. .+.+.|+|+|..+..... ....++ .|.|.+++.+|+|.|+|.|.|
T Consensus 22 ~~~P~i~~~p~-~~v~~G~~v~L~C~~~~~-~~~~~W~k~g~~~~~~~~--~~~~~~--~L~I~~v~~~D~G~Y~C~a~~ 95 (316)
T 3vh8_G 22 QDKPFLSAWPS-AVVPRGGHVTLRCHYRHR-FNNFMLYKEDRIHIPIFH--GRIFQE--SFNMSPVTTAHAGNYTCRGSH 95 (316)
T ss_dssp --CCEEEEESC-SEEETTSCEEEEEEBTTB-CCSEEEEESSCSSSCHHH--HCCBSS--CEEECSCCGGGCEEEEEEEBC
T ss_pred CCCCEeeccCC-CccCCCCCEEEEEEccCC-CceEEEEeCCCccceeec--CCcceE--EEEECCCCcccCeEEEEEEEc
Confidence 36899998887 578899999999999887 678999999988654211 011122 599999999999999999986
Q ss_pred Cc-----ccceeEEEEEecC---CCeeecCCCceEEcCCCeEEEEEEEecCCCceEEEeeCceeeecCCce-EEEEeCCe
Q psy7042 168 SV-----GFAHTSSRVKIGT---PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRF-KFTVLDDY 238 (2245)
Q Consensus 168 ~~-----g~~~~~~~l~V~~---~P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~-~~~~~~~~ 238 (2245)
.. +..+..+.|.|.. +|.+...|... +.+|+.++|.|.+. .+++.+.|+|+|..+...... ........
T Consensus 96 ~~~~~~~~~~s~~~~l~V~~~~~~p~~~~~~~~~-v~~G~~v~L~C~~~-~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~ 173 (316)
T 3vh8_G 96 PHSPTGWSAPSNPVVIMVTGNHRKPSLLAHPGPL-VKSGERVILQCWSD-IMFEHFFLHKEGISKDPSRLVGQIHDGVSK 173 (316)
T ss_dssp SSSSSSBCCCCCCEEEEEECSSCCCEEEEESCSE-EETTCCEEEEEEES-SCCSEEEEEETTCCSCCEEEECEEETTEEE
T ss_pred CCCCcceecCCCcEEEEEecCCCCCeEEecCCCc-cCCCCeEEEEEcCC-CCCcEEEEEECCCccccceeeeeecCCCce
Confidence 43 2344466777754 46676666655 88999999999995 466799999999877432211 11112244
Q ss_pred EEEEEcccCccCceeEEEEEEcCCcc
Q psy7042 239 IIIFIKEIRKEDAGDYTVNLSNSSGS 264 (2245)
Q Consensus 239 ~~L~i~~~~~~d~G~Y~C~a~n~~g~ 264 (2245)
..|.|.++..+|+|.|+|.|.|..|.
T Consensus 174 ~~L~i~~v~~~D~G~Y~C~a~n~~g~ 199 (316)
T 3vh8_G 174 ANFSIGPMMLALAGTYRCYGSVTHTP 199 (316)
T ss_dssp EEEEECSCCGGGCEEEEEEEECTTCT
T ss_pred EEEEECCCChhhCceEEEEEecCCCC
Confidence 67999999999999999999998764
No 90
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.91 E-value=1.5e-23 Score=248.40 Aligned_cols=164 Identities=15% Similarity=0.168 Sum_probs=133.1
Q ss_pred CCceeccCCceEEcCCCeEEEEEEecCcCCC-eEEEeeCCEeccCCceEEEEecCcEEEEEEeeeccCCCeEEEEEEecC
Q psy7042 1697 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVP-KCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNS 1775 (2245)
Q Consensus 1697 ~p~~~~~~~~~~~~~G~~v~L~C~~~~~p~~-~v~W~~~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~ 1775 (2245)
+|.|...+....+.+|+++.|.|.+.+.|.+ .++|+++|..+... ...|.|.+++.+|+|.|+|.+.|.
T Consensus 1 kP~i~~~p~~~~v~~G~~v~l~C~~~~~~~~~~~~W~~~g~~~~~~----------~~~l~i~~~~~~d~G~Y~C~~~~~ 70 (262)
T 3rjd_A 1 KAVITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQTS----------TPSYRITSASVNDSGEYRCQRGLS 70 (262)
T ss_dssp CCEEEESSCCSEEETTCCEEEEEECSSCCCTTCEEEEETTEECSCC----------SSEEEESSCCGGGCEEEEEEESSS
T ss_pred CCeEecCCCcEEeeCCCeEEEEEECCCCCCCceEEEEECCEEeecc----------CCeEEEecCCcccCeEEEEEEecC
Confidence 4667777888899999999999999998887 99999999988543 123999999999999999999986
Q ss_pred ceeeEEEEEEEecCCCccccCCCceEEcCCCeEEEEEEE-eccCCcEEEEEECCEEeecCCceEEEEcCCeEEEEEcccC
Q psy7042 1776 VGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFY-AGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIR 1854 (2245)
Q Consensus 1776 ~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~l~i~~~~ 1854 (2245)
.+.. .+.|.|..++... .+....+.+|+.+.|.|.+ .+.|.+.+.|+++|..+... .....|.|.++.
T Consensus 71 ~~s~--~~~l~v~~~~~~~-~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~~--------~~~~~l~i~~~~ 139 (262)
T 3rjd_A 71 GRSD--PIQLEIHRGWLLL-QVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFF--------HWNSNLTILKTN 139 (262)
T ss_dssp CCCC--CEEEEEECSSEEE-EESCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEEE--------EECCCEEESSCC
T ss_pred Cccc--cEEEEEeccceEe-cCCCeEEecCCeEEEEEEccCCCCCceEEEEECCcccccc--------CCCCeEEEEECC
Confidence 6543 5667777666443 3445678899999999999 67788999999999987432 112469999999
Q ss_pred cccceEEEEEEEcCCeeeEEEEEEEEe
Q psy7042 1855 KEDAGDYTVNLSNSSGSVSGTFTINIT 1881 (2245)
Q Consensus 1855 ~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 1881 (2245)
.+|+|.|+|.|.|..+..+..+.|.|.
T Consensus 140 ~~d~G~Y~C~~~n~~~~~~~~~~l~V~ 166 (262)
T 3rjd_A 140 ISHNGTYHCSGMGKHRYTSAGISVTVK 166 (262)
T ss_dssp GGGCEEEEEEEESSSEEEEECEEEEEE
T ss_pred hhhCEEEEEEEeCCCCccccceEEEec
Confidence 999999999999998777776677665
No 91
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.91 E-value=1.6e-23 Score=256.30 Aligned_cols=171 Identities=14% Similarity=0.136 Sum_probs=132.4
Q ss_pred cccccceeeEEEEeccC-cCeEEEEeCCeecCCC-ccEEEEeeCCeEEEEEecccccCCceEEEEEEeC--CCCCCcc--
Q psy7042 492 AIQNHNAQFQCTITGCP-KPTISWLKGSREITPS-ARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNK--GGVKSTK-- 565 (2245)
Q Consensus 492 ~~~g~~~~l~C~~~g~p-~~~v~W~~~~~~i~~~-~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~--~g~~~~~-- 565 (2245)
+.+|+.+.|.|.+.|.| .+.+.|+|++..+... .++... +. .|.|.++..+|+|.|+|.|.|. .|.....
T Consensus 140 ~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~~~~~~~~--~~--~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s 215 (329)
T 3oq3_B 140 THDKYGIDLYCGILYAKHYNNITWYKNNQELIIDGTKYSQS--GQ--NLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVS 215 (329)
T ss_dssp SSTTTCEEEECCCCSCCCCCEEEEEETTEECCCSSSSEEEE--TT--EEEECSCCGGGCEEEEEEEEECCTTSSSCEEEE
T ss_pred EeCCCcEEEEeccCCCCCCceEEEEECCccCCCCCceEecC--CC--EEEEeecChhhCEEEEEEEEecccCCCceeEEE
Confidence 46799999999999999 8999999999998643 344333 32 8999999999999999999998 7766554
Q ss_pred --eeEeEecCCCCCCCCCcccceEeeCCCeEEEEEeeeecC---CC-eEEEEeCCeEe-eccCeEEEE--ecC--CeEEE
Q psy7042 566 --AELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYP---KP-KITWYRDNEVI-ESGGHFHVE--TSE--RHAIL 634 (2245)
Q Consensus 566 --~~l~v~~~p~~~~~p~~~~~~~~~~g~~~~l~C~~~g~p---~~-~i~W~~~~~~~-~~~~~~~~~--~~~--~~~~l 634 (2245)
+.|.|..+|....+........+..|+.++|.|.+.|.| .+ .+.|++++..+ ..+...... ... ....|
T Consensus 216 ~~~~l~V~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~L 295 (329)
T 3oq3_B 216 RCKILTVIPSQDHRFKLILDPKINVTIGEPANITCTAVSTSLLVDDVLIDWENPSGWIIGLDFGVYSILTSSGGITEATL 295 (329)
T ss_dssp EEEEEEEECCCCCCEEEECCSEEEECTTSCEEEEEEEEETTCCTTCCEEEEECTTSCBCCBCSSEEEEEEEETTEEEEEE
T ss_pred eeEEEEEECCCCCCCceecCCeeEEecCCCEEEEEEEEECCCCCCCcEEEEEECCeeeeccCCceeeeecccCceeEeEE
Confidence 778888776321110011236688999999999999998 77 89999999874 333322221 111 35789
Q ss_pred EEcCCCCCcCE-EEEEEEEeCCCCceeEEEEEe
Q psy7042 635 TIRDASNVDTA-PYRVVAENDLGMDSAIVKIQI 666 (2245)
Q Consensus 635 ~i~~~~~~d~g-~y~C~a~n~~g~~~~~~~l~v 666 (2245)
.|.+++.+|.| .|+|.|.|..|..+..+.|.|
T Consensus 296 ~I~~v~~~D~G~~Y~C~a~N~~G~~~~~~~l~v 328 (329)
T 3oq3_B 296 YFENVTEEYIGNTYTCRGHNYYFDKTLTTTVVL 328 (329)
T ss_dssp EESSCCGGGTTCEEEEEEECSSCEEEEEEEEEE
T ss_pred EEEeccHHHCCCcEEEEEEecCCceEEEEEEEe
Confidence 99999999999 999999999999988888876
No 92
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.91 E-value=9.7e-24 Score=236.39 Aligned_cols=187 Identities=26% Similarity=0.480 Sum_probs=170.0
Q ss_pred CCCCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECCeeccCCC--eEEEEEcCcEEEEEEeeeccCCCeEEEEEE
Q psy7042 88 GEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGA--RYRVETAGGVFRLHFNEVTDVDNGDYTCEA 165 (2245)
Q Consensus 88 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~~--~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a 165 (2245)
..+|.|..++..+.+.+|+.++|.|.+.|.|.+.+.|+|+|..+.... ++.+...++...|.|.+++.+|+|.|+|.|
T Consensus 3 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 82 (194)
T 2a38_A 3 TQAPTFTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKA 82 (194)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCCeEEccCCceEEECCCEEEEEEEEEecCCCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEEE
Confidence 358899999999999999999999999999999999999999988654 666666677788999999999999999999
Q ss_pred EcCcccceeEEEEEec---CCCeeecCCCceEEcCCCeEEEEEEEecCCCceEEEeeCceeeecCCceEEEEeCCeEEEE
Q psy7042 166 YNSVGFAHTSSRVKIG---TPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIF 242 (2245)
Q Consensus 166 ~n~~g~~~~~~~l~V~---~~P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~ 242 (2245)
.|..|....++.|.|. .+|.+...+....+.+|+.+.|.|.+.|.|.+.+.|+|+|..+....++.+...+....|.
T Consensus 83 ~n~~~~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~ 162 (194)
T 2a38_A 83 TNGSGQATSTAELLVKAETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQSSLDFQISQEGDLYSLL 162 (194)
T ss_dssp EETTEEEEEEEEEEEECCCEEEEEEECCCCEEECTTEEEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEEETTEEEEE
T ss_pred EcCCceEeEEEEEEEccCCCCCEEEeCCccEEEcCCCEEEEEEEEEEecCCeEEEEECCEECCCCCcEEEEEcCCEEEEE
Confidence 9999988888889987 5777888888899999999999999999999999999999999888888888878778899
Q ss_pred EcccCccCceeEEEEEEcCCcceEEEEEEEEe
Q psy7042 243 IKEIRKEDAGDYTVNLSNSSGSVSGTFTINIT 274 (2245)
Q Consensus 243 i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 274 (2245)
|.++..+|+|.|+|.|.|..|....++.|.|.
T Consensus 163 i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 194 (194)
T 2a38_A 163 IAEAYPEDSGTYSVNATNSVGRATSTAELLVQ 194 (194)
T ss_dssp EEEECGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred ECCCChhcCeEEEEEEEeCCCceEEEEEEEEC
Confidence 99999999999999999999999999998873
No 93
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.91 E-value=6.5e-24 Score=260.31 Aligned_cols=173 Identities=16% Similarity=0.184 Sum_probs=118.8
Q ss_pred CceeccCCceEEcCCCeEEEEEEecCc-CCCeEEEeeCCEecc---------CCceEEEEec-----CcEEEEEEeeecc
Q psy7042 1698 PDFIVPLKDLVVPLGKLLTLQCEATGT-PVPKCRWLRNGREIS---------SGARYRVETA-----GGVFRLHFNEVTD 1762 (2245)
Q Consensus 1698 p~~~~~~~~~~~~~G~~v~L~C~~~~~-p~~~v~W~~~~~~l~---------~~~~~~~~~~-----~~~~~L~i~~v~~ 1762 (2245)
..|..++..+.+.+|+++.|.|.+.+. |.+.+.|+|++.++. ...|+....+ ....+|.|.+++.
T Consensus 4 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~ 83 (327)
T 2wng_A 4 LQVIQPDKSVSVAAGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITP 83 (327)
T ss_dssp CCEECCCSEEEEETTSCEEECCEESCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCCG
T ss_pred eEEEcCCCceEEecCCcEEEEEEccCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCcc
Confidence 356667788999999999999999887 888999999875431 1124443221 3445699999999
Q ss_pred CCCeEEEEEEecCceee-----EEEEEEEecCCCccc-cCCCceEEcCCCeEEEEEEEeccCCc--EEEEEECCEEeecC
Q psy7042 1763 VDNGDYTCEAYNSVGFA-----HTSSRVKIGTPPRID-RMPNALYIPEGDNTKVKIFYAGDQPM--EVSLTKNGRVVQSD 1834 (2245)
Q Consensus 1763 ~d~G~Y~C~~~n~~g~~-----~~~~~l~V~~~p~~~-~~~~~~~~~~g~~~~l~C~~~~~p~~--~v~W~~~g~~l~~~ 1834 (2245)
+|+|.|+|.+.|..+.. ...+.|.|..+|... .......+.+|+.+.|.|.+.|.|++ .+.|+++|+.+...
T Consensus 84 ~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~~~~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~l~~~ 163 (327)
T 2wng_A 84 ADAGTYYCVKFRKGSPDTEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDF 163 (327)
T ss_dssp GGCEEEEEEEEESSTTCEEEEECCCEEEEEEBCCCCCEEECCSSCBCTTCEEEEEEEEEEEBSSCCEEEEEETTEECCCE
T ss_pred ccCeEEEEEeecCCCcceeEeecCcEEEEEEecCCCceeeccccccCCCCEEEEEEEEeCccCCCcEEEEEECCEEcccc
Confidence 99999999999976531 134677776655421 11223567889999999999998765 99999999988543
Q ss_pred CceEEEEcC-C----eEEEEEcccCcccceEEEEEEEcCCe
Q psy7042 1835 DRFKFTVLD-D----YIIIFIKEIRKEDAGDYTVNLSNSSG 1870 (2245)
Q Consensus 1835 ~~~~~~~~~-~----~~~l~i~~~~~~d~G~Y~C~a~n~~g 1870 (2245)
......... . ...|.|.....+|.|.|+|.|.|..|
T Consensus 164 ~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~ 204 (327)
T 2wng_A 164 QTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTL 204 (327)
T ss_dssp EEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTS
T ss_pred ccccccccCCCceEEEEEEEEechhcCcCceEEEEEecccc
Confidence 211110000 0 12455665566666777777776644
No 94
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.91 E-value=1.3e-23 Score=252.97 Aligned_cols=268 Identities=15% Similarity=0.194 Sum_probs=183.5
Q ss_pred CceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECCeeccCCCeEEEEEcCc-EEEEEEeeeccCCCeEEEEEEEcCc
Q psy7042 91 PDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGG-VFRLHFNEVTDVDNGDYTCEAYNSV 169 (2245)
Q Consensus 91 P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~-~~~L~i~~~~~~d~G~Y~C~a~n~~ 169 (2245)
|.|.....++.+.+|+.++|.|.+.|. |.|+|++..+. .+......+. ..+|.|.+++.+|+|.|+|.|.|..
T Consensus 1 P~i~~~~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~~~--~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~ 74 (289)
T 3mjg_X 1 LVVTPPGPELVLNVSSTFVLTCSGSAP----VVWERMSQEPP--QEMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHNDSR 74 (289)
T ss_dssp CCBCSSCSEEECCTTCCEEEEEEESSC----CEEEBTTBCCS--EEEEECTTSCEEEEEEECSCCGGGCEEEEEECCC--
T ss_pred CeecCCCCeEEEeCCCcEEEEEeccce----EEEECCCCCcc--cceeccCCCceeEEEEEccCChhhCEEEEEEEcccC
Confidence 556666677889999999999999874 99999999874 2333333332 3579999999999999999999998
Q ss_pred cc---ceeEEEEEecCCCe--eecCCCc--eEEcCCCeEEEEEEEecCCCceEEEeeCc--eeeecCCceEEEEeCCeEE
Q psy7042 170 GF---AHTSSRVKIGTPPR--IDRMPNA--LYIPEGDNTKVKIFYAGDQPMEVSLTKNG--RVVQSDDRFKFTVLDDYII 240 (2245)
Q Consensus 170 g~---~~~~~~l~V~~~P~--~~~~~~~--~~v~~G~~~~l~C~~~g~p~~~i~W~~~g--~~l~~~~~~~~~~~~~~~~ 240 (2245)
|. ...++.|.|..++. +...+.. ..+.+|+.+.|.|.+. .|.+.++|++++ ..+. ..+ ......
T Consensus 75 g~~~~~~~~~~v~v~~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~w~~~~~~~~~~--~~~----~~~~~~ 147 (289)
T 3mjg_X 75 GLETDERKRLYIFVPDPTVGFLPNDAEELFIFLTEITEITIPCRVT-DPQLVVTLHEKKGDVALP--VPY----DHQRGF 147 (289)
T ss_dssp ----CCCEEEEEECCCTTCCBCCCCHHHHEEEESSCCCEEECCCBS-CTTSCEEEEESSCCSCCC--CCE----ETTTEE
T ss_pred CCCcCcEEeEEEEEECCCcCcccCCCCcceEEeecCCeEEEEeEcC-CCCceEEEEeCCCCCccc--eee----cCCcCe
Confidence 76 33456666664433 2222222 6799999999999998 688899998864 3332 111 111111
Q ss_pred EEEcccCccCceeEEEEEEcCCcceE-EEEEEEEecCCCCCCCCcccceeeccceEEEecCCCCCCCceeEEEEEEEEec
Q psy7042 241 IFIKEIRKEDAGDYTVNLSNSSGSVS-GTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDI 319 (2245)
Q Consensus 241 L~i~~~~~~d~G~Y~C~a~n~~g~~~-~~~~l~V~~~p~~~~~~~~~~~~~~~s~~~~w~pp~~~~~~~~~~~~~~~~~~ 319 (2245)
+ ..+|+|.|+|.|.|..+... ....|.|...
T Consensus 148 ~-----~~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~~------------------------------------------- 179 (289)
T 3mjg_X 148 S-----GIFEDRSYICKTTIGDREVDSDAYYVYRLQV------------------------------------------- 179 (289)
T ss_dssp E-----ECCCSSEEEEEEEETTEEEECCCEEEEECCC-------------------------------------------
T ss_pred e-----eeccCcEEEEEEEeCCceeeeeeEEEEecCC-------------------------------------------
Confidence 1 35799999999998665432 2233333211
Q ss_pred CCCceEEeeeccCcceEEEcCCCCCCEEEEEEEEEecCCCCCCCCCCCceecCCCCCCCCCCCCcEEEeecCCeeEEEec
Q psy7042 320 SMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWD 399 (2245)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~c~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~v~~~~~~~~~l~W~ 399 (2245)
T Consensus 180 -------------------------------------------------------------------------------- 179 (289)
T 3mjg_X 180 -------------------------------------------------------------------------------- 179 (289)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCccEEEEEeeecCCCCcEEEeeeecCCceeecCCcccCceEEEEEEeecCCCCCCCCCCCCcEEecCCcccC
Q psy7042 400 KPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAK 479 (2245)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~s~~~~~v~~~~~~~~~ 479 (2245)
.
T Consensus 180 -------------------------------------------------------------------------------~ 180 (289)
T 3mjg_X 180 -------------------------------------------------------------------------------S 180 (289)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred -------------------------------------------------------------------------------C
Confidence 1
Q ss_pred CCceeccccccccccccceeeEEEEeccCcCeEEEEeCCeecCCCccEE-EEe----eCCeEEEEEecccccCCceEEEE
Q psy7042 480 APEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHH-IFA----EGDTYTLIINSVYGVDADEYVCR 554 (2245)
Q Consensus 480 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~~~-~~~----~~~~~~L~i~~v~~~d~G~Y~C~ 554 (2245)
+|.+...+.+..+.+|+++.|.|.+.|.|.+.+.|++++.......... ... ......|.|.++..+|+|.|+|.
T Consensus 181 ~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 260 (289)
T 3mjg_X 181 SINVSVNAVQTVVRQGENITLMCIVIGNEVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCN 260 (289)
T ss_dssp CCCCEEEESCSEEETTSCEEEEEEEESCSSBEEEEECTTSSSSCCCCCEEEESCTTTTEEEEEEEESSCCSSCCEEEEEE
T ss_pred CCCcEEeCCcceeEcCCCEEEEEEECCCCCcceEEEcCCccCCCcccccccccCCcceEEEEEEEEcccChhhCcEEEEE
Confidence 2222333334557789999999999999999999998876554322211 111 12345899999999999999999
Q ss_pred EEeCCCCCCcceeEeEecCCCCCC
Q psy7042 555 AVNKGGVKSTKAELIIMTAPKFNV 578 (2245)
Q Consensus 555 a~n~~g~~~~~~~l~v~~~p~~~~ 578 (2245)
|.|..|....++.|+|...|....
T Consensus 261 a~N~~G~~~~~~~l~v~~~~~~~~ 284 (289)
T 3mjg_X 261 VTESVNDHQDEKAINITVVESGHH 284 (289)
T ss_dssp EEETTTTEEEEEEEEEEEEC----
T ss_pred eecCCCCceeEEEEEEEEEecCcc
Confidence 999999999999999998776543
No 95
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.91 E-value=1.1e-22 Score=263.05 Aligned_cols=221 Identities=9% Similarity=0.052 Sum_probs=140.6
Q ss_pred eeceEEECCCccCCcEEEEEEEEcCCCCCCCC-CccccEEEeec-cCCCCCceecCCcceEEeCCCeEEEEEEEeee-cC
Q psy7042 43 LECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS-ICTTPVKICEF-VGGEKPDFIVPLKDLVVPLGKLLTLQCEATGT-PV 119 (2245)
Q Consensus 43 ~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~-~~~~~~~v~~~-~~~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~-p~ 119 (2245)
...+|.|.+++.+|+|.|.|.+.|..|..... .....+.+.+. ....+|.+...+.. .+.+|+.++|.|.+.|. |.
T Consensus 78 ~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~-~~~~g~~v~L~C~~~g~~P~ 156 (475)
T 1iga_A 78 TTAYMGLSSLRPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTVSSASPTSPKVFPLSLC-STQPDGNVVIACLVQGFFPQ 156 (475)
T ss_pred CeEEEEECCCChhhCEEEEEEEeccCCCccceeeecCceEEEeccCCCcCCeEEecCcc-ccCCCCeEEEEEEEeeecCC
Confidence 34689999999999999999999877631100 00011222222 12245665543322 23789999999999987 65
Q ss_pred -C-ceEEEECCeeccCCCeEEEE-EcCc----EEEEEEeeeccCCCeEEEEEEEcCcccc-eeEEEEEec----------
Q psy7042 120 -P-KCRWLRNGREISSGARYRVE-TAGG----VFRLHFNEVTDVDNGDYTCEAYNSVGFA-HTSSRVKIG---------- 181 (2245)
Q Consensus 120 -~-~i~W~~~g~~l~~~~~~~~~-~~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~---------- 181 (2245)
+ .|.|+|++............ ..++ ...|.|..+..+|+|.|+|.|.|..+.. ...+.|.|.
T Consensus 157 ~p~~v~W~~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~v~l~V~~~~~~~~~~~ 236 (475)
T 1iga_A 157 EPLSVTWSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPSQDVTVPCPVPSTPPTPSPST 236 (475)
T ss_pred CceEEEEcCCCcccceEeCCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCCceeeeEecccccCcccccccc
Confidence 4 99999988543211000011 1122 1258888999999999999999988742 223333331
Q ss_pred --------CCCee-ecCCCceEEcCCCeEEEEEEEecCCC---ceEEEeeCceeeecCCceEEE-E-eC---CeEEEEEc
Q psy7042 182 --------TPPRI-DRMPNALYIPEGDNTKVKIFYAGDQP---MEVSLTKNGRVVQSDDRFKFT-V-LD---DYIIIFIK 244 (2245)
Q Consensus 182 --------~~P~~-~~~~~~~~v~~G~~~~l~C~~~g~p~---~~i~W~~~g~~l~~~~~~~~~-~-~~---~~~~L~i~ 244 (2245)
.+|.+ ...|....+.+|+.++|.|.+.|.++ +.|+| + +..+......... . .+ ..+.|.|.
T Consensus 237 ~~~~~~~~~~p~v~~~~p~~~~~~~G~~v~L~C~~~g~~p~~~~~i~W-~-~~~~~~~~~~~~~~~~~g~~~~~~~L~I~ 314 (475)
T 1iga_A 237 PPTPSPSCCHPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW-T-PSSGKSAVQGPPERDLCGCYSVSSVLPGC 314 (475)
T ss_pred cccCCCCCCCcEEEEcCCChHHhccCCceEEEEEEEcccCCCceEEEE-C-CCCcCCccccCceECCCCCEEEEEEEEEc
Confidence 24554 33344444689999999999998754 69999 4 4443322111100 0 11 23479999
Q ss_pred ccCccCceeEEEEEEcCCcceE
Q psy7042 245 EIRKEDAGDYTVNLSNSSGSVS 266 (2245)
Q Consensus 245 ~~~~~d~G~Y~C~a~n~~g~~~ 266 (2245)
++..+|+|.|+|.|.|..|...
T Consensus 315 ~~~~~d~G~Y~C~a~n~~~~~~ 336 (475)
T 1iga_A 315 AEPWNHGKTFTCTAAYPESKTP 336 (475)
T ss_pred hHHhccCCcEEEEEEcCCCCCc
Confidence 9999999999999999877643
No 96
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.91 E-value=9.6e-24 Score=260.07 Aligned_cols=272 Identities=15% Similarity=0.200 Sum_probs=196.2
Q ss_pred CCceeccCCceEEcCCCeEEEEEEecCc----CCCeEEEeeCC--Ee-------------c--cCCceEEEE-ecCcEEE
Q psy7042 1697 KPDFIVPLKDLVVPLGKLLTLQCEATGT----PVPKCRWLRNG--RE-------------I--SSGARYRVE-TAGGVFR 1754 (2245)
Q Consensus 1697 ~p~~~~~~~~~~~~~G~~v~L~C~~~~~----p~~~v~W~~~~--~~-------------l--~~~~~~~~~-~~~~~~~ 1754 (2245)
++.+...+..+.+.+|++++|.|.+.+. +.+.+.|++++ .. + ....|+.+. ......+
T Consensus 14 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 93 (331)
T 3u83_A 14 PSQVVQVNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGT 93 (331)
T ss_dssp -------CEEEEEETTCCEEECCBCSSCCSSCEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESSCSSSBCC
T ss_pred CcceEEcCCcEEEEecCCEEEeeecCCCCCCCceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecccCCCCce
Confidence 3444555677899999999999999876 45579999954 11 1 122344443 1223456
Q ss_pred EEEeeeccCCCeEEEEE-EecCceeeEEEEEEEecCCCccc--cCCCceEEcCC---CeEEEEEE-EeccCCcEEEEEEC
Q psy7042 1755 LHFNEVTDVDNGDYTCE-AYNSVGFAHTSSRVKIGTPPRID--RMPNALYIPEG---DNTKVKIF-YAGDQPMEVSLTKN 1827 (2245)
Q Consensus 1755 L~i~~v~~~d~G~Y~C~-~~n~~g~~~~~~~l~V~~~p~~~--~~~~~~~~~~g---~~~~l~C~-~~~~p~~~v~W~~~ 1827 (2245)
|.|.+++.+|+|.|+|. +.+..|.....+.|.|..+|.+. ..+....+.+| +.+.|.|. ..+.|.+.+.|+++
T Consensus 94 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~~ 173 (331)
T 3u83_A 94 IRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETR 173 (331)
T ss_dssp EEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCCEEEEEES
T ss_pred EEEcccCcccCcEEEEEEEecCCCccEEEEEEEEecCCcceeecCCCceeecCCCccceEEEEEEecCCcCCceEEEEcC
Confidence 99999999999999998 56667888888999999988763 35667788888 78999998 88899999999995
Q ss_pred C--EEeec-----CCceEEEEcCCeEEEEEcccCcccceEEEEEEEcCCeeeEEEEEEEEeCCCCCCCCCceecccccce
Q psy7042 1828 G--RVVQS-----DDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHT 1900 (2245)
Q Consensus 1828 g--~~l~~-----~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~ 1900 (2245)
+ ..... ...+.+ ...|.|..+..+|+|.|+|.|.|..|..+..+.|.|..+|
T Consensus 174 ~~~~~~~~~~~~~~~~~~~-----~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~P---------------- 232 (331)
T 3u83_A 174 LKGEAEYQEIRNPNGTVTV-----ISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQYEP---------------- 232 (331)
T ss_dssp SCCEEEEEEEECTTSCEEE-----EEEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEEEEE----------------
T ss_pred CCCccccceeECCCCcEEE-----EEEEEEEeccccCCCEEEEEEecCCCcceeeEEEEEecCC----------------
Confidence 3 22211 111111 1468899999999999999999998876666555543111
Q ss_pred EEEEecCCCCCCCeeeeEEEEEEEcCCCCceEEEeeecCcceEEecCCCCCCeEEEEEEEECCCCCCCCCCCcCceeccC
Q psy7042 1901 CTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKS 1980 (2245)
Q Consensus 1901 ~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~~~a~n~~g~~~~s~~~~~~~~~~ 1980 (2245)
T Consensus 233 -------------------------------------------------------------------------------- 232 (331)
T 3u83_A 233 -------------------------------------------------------------------------------- 232 (331)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCCcEEEEEcCCeEEEEEeccCCCCCCceeEEEEEEeeecCccceEEEEEEeccceEEeCCCcCCceEEEEEE
Q psy7042 1981 PYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVY 2060 (2245)
Q Consensus 1981 ~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~ 2060 (2245)
T Consensus 233 -------------------------------------------------------------------------------- 232 (331)
T 3u83_A 233 -------------------------------------------------------------------------------- 232 (331)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEeccccCCCcCCCCcccccCcccCCCceEE-eeccceeeecCccEEEEEEEEeeCCCe-EEEeeCCEeeCCCCcEEEEE
Q psy7042 2061 AQNEAGLSLPSSASNSVQIKDPMAAKAPEII-VPLRNANAIQNHNAQFQCTITGCPKPT-ISWLKGSREITPSARHHIFA 2138 (2245)
Q Consensus 2061 a~n~~g~~~~~~~s~~v~~~~~~~~~~p~~~-~~~~~~~~~~g~~v~l~C~~~g~P~p~-i~W~~~g~~l~~~~~~~~~~ 2138 (2245)
.+. ..+....+.+|+.++|.|.+.|.|.|. |.|+|++..+.... ...
T Consensus 233 ----------------------------~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~i~W~~~~~~~~~~~---~~~ 281 (331)
T 3u83_A 233 ----------------------------EVTIEGFDGNWYLQRMDVKLTCKADANPPATEYHWTTLNGSLPKGV---EAQ 281 (331)
T ss_dssp ----------------------------EEEEECCCSCCBTTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTE---EEE
T ss_pred ----------------------------eEEEecCCCceEeCCCeEEEEEeCcCCCCCCEEEEEECCCcccccc---eec
Confidence 000 001112356799999999999999999 99999999886553 223
Q ss_pred eCcEEEEEEc-CCCCCCCeEEEEEEEeCCceeeEEEEEEEEcCCCC
Q psy7042 2139 EGDTYTLIIN-SVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKF 2183 (2245)
Q Consensus 2139 ~~~~~~L~i~-~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~p~~ 2183 (2245)
++ .|.|. ++..+|+|.|+|.|.|.+|..+.++.|.|...+..
T Consensus 282 ~~---~L~i~~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~ 324 (331)
T 3u83_A 282 NR---TLFFKGPINYSLAGTYICEATNPIGTRSGQVEVNITEAAAL 324 (331)
T ss_dssp TT---EEEECSCCCGGGCEEEEEEEEETTEEEEEEEEECCBC----
T ss_pred Cc---EEEEeCCCccccCeEEEEEEEeccccceEEEEEEEeccchh
Confidence 33 79999 89999999999999999999999999999876554
No 97
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.91 E-value=4.9e-25 Score=282.03 Aligned_cols=211 Identities=10% Similarity=0.100 Sum_probs=143.5
Q ss_pred eceEEECCCccCCcEEEEEEEEcCCCCCCCCCccccEEEeeccCCCCCceecCCcceEEeCCCeEEEEEEEeee-cCC-c
Q psy7042 44 ECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGT-PVP-K 121 (2245)
Q Consensus 44 ~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~~~v~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~-p~~-~ 121 (2245)
..+|.|.+++.+|+|.|+|.|.|..+..... ..+.|.. ....+|.+...+....+.+|+.++|.|.+.|. |.| .
T Consensus 77 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~---~~l~V~~-~~~~~P~i~~~~~~~~~~~G~~v~L~C~~~g~~P~p~~ 152 (434)
T 1igy_B 77 TANIHLSSLTSDDSAVYYCVREGEVPYWGQG---TTVTVSS-AKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVT 152 (434)
T ss_dssp BBCEEECSBCGGGCSEECCCCSSSSCCCCCC---EECEECC-SCCBCCCEEEECCCCCCCCTTEEEEEEEEEEEBSSCCE
T ss_pred EEEEEECCCChHHCEEEEEEEEccccccCCc---eEEEEcc-CCCCCCeEEEcCCccccCCCCcEEEEEEEeeecCCCeE
Confidence 4589999999999999999998854322211 1222211 11235655543323345899999999999986 776 9
Q ss_pred eEEEECCeeccC--------CCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEEcCcccceeEEEEEecC----------C
Q psy7042 122 CRWLRNGREISS--------GARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGT----------P 183 (2245)
Q Consensus 122 i~W~~~g~~l~~--------~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~----------~ 183 (2245)
|.|+|+|..+.. +..|.. ...|.|.+++.+| |.|+|.|.|..|.......+.+.. +
T Consensus 153 v~W~k~~~~~~~~~~~~~~~~~~~~~-----~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~~~~~~~~~~v~~~~~~ 226 (434)
T 1igy_B 153 VTWNSGSLSSGVHTFPAVLQSDLYTL-----SSSVTVPSSPRPS-ETVTCNVAHPASSTKVDKKIVPRDCGCKPCICTVP 226 (434)
T ss_dssp EEETTTTBCSSEEECCCEECSSCEEE-----EEEEEEETTTTTS-SCCEEEEECTTTTCCEEEECCCCCCCCCCCCCCCS
T ss_pred EEEeeCCcCCCeEecCceecCCcEEE-----EEEEEEcchhcCC-CcEEEEEEeCCCCccceeeccCCCCCCccccCCCC
Confidence 999999875321 112221 1358999999899 999999999998765555554431 1
Q ss_pred --Ceee-cCCCceE-EcCCCeEEEEEEEecCC----CceEEEeeCceeeecCCceEEE--Ee---CCeEEEEEcccCccC
Q psy7042 184 --PRID-RMPNALY-IPEGDNTKVKIFYAGDQ----PMEVSLTKNGRVVQSDDRFKFT--VL---DDYIIIFIKEIRKED 250 (2245)
Q Consensus 184 --P~~~-~~~~~~~-v~~G~~~~l~C~~~g~p----~~~i~W~~~g~~l~~~~~~~~~--~~---~~~~~L~i~~~~~~d 250 (2245)
|.+. ..|.... +.+|+.++|.|.+.|.| .+.|+|+|+|..+......... .. ...+.|.|.++..+|
T Consensus 227 ~~p~v~~~~p~~~~~v~~G~~~~L~C~~~g~~p~P~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 306 (434)
T 1igy_B 227 EVSSVFIFPPKPKDTLLITVTPKVTCVVVDISKDDPEVQFSWFVDNVEVHTAQTQPREEQFNSTFRVVSALPIMHQDWLN 306 (434)
T ss_dssp SSCCEEEECCCHHHHHSTTSCCEEEEEECCCCSSCCCCCBCBBSSSCCBCCCSCCCCCCCCSSSCCCCCCEECCHHHHHH
T ss_pred cCcEEEEeCCChHHhcccCCCcEEEEEEeccccCCCCeEEEEEeCCcccCCcccCcceeCCCCcEEEEEEEEECHHHccC
Confidence 4443 3333232 88999999999999874 4589999999887543221110 00 112468999999999
Q ss_pred ceeEEEEEEcCCcc
Q psy7042 251 AGDYTVNLSNSSGS 264 (2245)
Q Consensus 251 ~G~Y~C~a~n~~g~ 264 (2245)
+|.|+|.|.|..|.
T Consensus 307 ~G~Y~C~a~n~~~~ 320 (434)
T 1igy_B 307 GKEFKCRVNSAAFP 320 (434)
T ss_dssp TCCCBCCBCCSSCS
T ss_pred CCcEEEEEECCCCC
Confidence 99999999987654
No 98
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.91 E-value=8.1e-24 Score=258.42 Aligned_cols=171 Identities=19% Similarity=0.240 Sum_probs=135.9
Q ss_pred eEEcCCCeEEEEEEe------cCcCCCeEEEeeCCEeccCCc-eEEEEecCcEEEEEEeeeccCCCeEEEEEEe-cCcee
Q psy7042 1707 LVVPLGKLLTLQCEA------TGTPVPKCRWLRNGREISSGA-RYRVETAGGVFRLHFNEVTDVDNGDYTCEAY-NSVGF 1778 (2245)
Q Consensus 1707 ~~~~~G~~v~L~C~~------~~~p~~~v~W~~~~~~l~~~~-~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~-n~~g~ 1778 (2245)
..+.+|+++.|.|.+ .|.|.+.+.|+|++..+.... ++.. .++ .|.|.+++.+|+|.|+|.|. |..|.
T Consensus 113 ~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~~~~~~--~~~--~L~i~~v~~~d~G~Y~C~a~~n~~g~ 188 (315)
T 1itb_B 113 QKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSG--VKD--RLIVMNVAEKHRGNYTCHASYTYLGK 188 (315)
T ss_dssp EEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCSSSEEE--ETT--EEEESSCCGGGCEEEEEEEEEEETTE
T ss_pred eEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCccceEee--cCc--eEEEEeceehhCcEEEEEEEcCCCCc
Confidence 457789999999998 889999999999999986432 3322 233 49999999999999999999 77776
Q ss_pred e---EEEEEEEec-----CCCccccCCCc-eEEcCCCeEEEEEEEeccCCcEEEEEECCEEeecCCceEE----EEcC--
Q psy7042 1779 A---HTSSRVKIG-----TPPRIDRMPNA-LYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKF----TVLD-- 1843 (2245)
Q Consensus 1779 ~---~~~~~l~V~-----~~p~~~~~~~~-~~~~~g~~~~l~C~~~~~p~~~v~W~~~g~~l~~~~~~~~----~~~~-- 1843 (2245)
. .....+.+. .+|.+...+.. ..+.+|+.+.|.|.+.|.|.+.+.|+++|..+........ ....
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~i~~~~~~~~~~~~~~~~~~ 268 (315)
T 1itb_B 189 QYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPA 268 (315)
T ss_dssp EEEEEEEEEEEEECCCCCCCCEECSCCSEEEECCSSSCEEEEEEEEECTTSEEEEEETTEECCTTCSSEEEEEEEECCSS
T ss_pred EEEEEEEEEEEEecCCCCCCCEEecCCCCcEEEeCCCcEEEEEEEecCCCCeeEEEECCEECCcccccccccceeeeccC
Confidence 5 334444443 67777766654 5788999999999999999999999999999876543221 1111
Q ss_pred ------CeEEEEEcccCccc-ceEEEEEEEcCCeeeEEEEEEEEe
Q psy7042 1844 ------DYIIIFIKEIRKED-AGDYTVNLSNSSGSVSGTFTINIT 1881 (2245)
Q Consensus 1844 ------~~~~l~i~~~~~~d-~G~Y~C~a~n~~g~~~~~~~l~v~ 1881 (2245)
....|.|.++..+| +|.|+|.|.|..|.....+.|.|.
T Consensus 269 ~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~ 313 (315)
T 1itb_B 269 NKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYP 313 (315)
T ss_dssp CGGGEEEEEEEEESSCCGGGGTSCEEEEEECTTCCEEEEEEEECC
T ss_pred CCceeEEEEEEEEeecCHHHcCCceEEEEecCCCceeEEEEEEec
Confidence 23489999999999 999999999999999999988874
No 99
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.91 E-value=8e-24 Score=255.47 Aligned_cols=275 Identities=17% Similarity=0.244 Sum_probs=200.9
Q ss_pred CCCceeccCCceEEcCCCeEEEEEEecCcCCCeEEEeeCCEeccCCceEEEEecCcEEEEEEeeeccCCCeEEEEEEecC
Q psy7042 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNS 1775 (2245)
Q Consensus 1696 ~~p~~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~ 1775 (2245)
.+|.|...+..+.+.+|++++|.|.+.+. +.|++++.. ++.+...+....|.|.+++.+|+|.|+|.+.|.
T Consensus 3 ~~P~i~~~~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~-----~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~ 73 (292)
T 4dkd_C 3 SIPVIEPSVPELVVKPGATVTLRCVGNGS----VEWDGPPSP-----HWTLYSDGSSSILSTNNATFQNTGTYRCTEPGD 73 (292)
T ss_dssp -CCEEESCCSSCEECTTCCEEEEEECSSC----CCBCCCCCS-----SCEECCBTTEEEEEESSCCGGGCSCEEECCCC-
T ss_pred CCceecCCCCeEEEcCCCcEEEEEcCCCc----eEEccCCCC-----ceEEeccCceEEEEEcccccccCEEEEEEEccC
Confidence 57888888888999999999999999874 999976532 333444556678999999999999999999998
Q ss_pred ceeeEEEEEEEecCCCcc-ccCCCceEEcCCCeEEEEEEEeccCC-cEEEEEEC-CEEeecCCceEEEEcCCeEEEEEcc
Q psy7042 1776 VGFAHTSSRVKIGTPPRI-DRMPNALYIPEGDNTKVKIFYAGDQP-MEVSLTKN-GRVVQSDDRFKFTVLDDYIIIFIKE 1852 (2245)
Q Consensus 1776 ~g~~~~~~~l~V~~~p~~-~~~~~~~~~~~g~~~~l~C~~~~~p~-~~v~W~~~-g~~l~~~~~~~~~~~~~~~~l~i~~ 1852 (2245)
.|.....+.|.|..+|.. ...+....+.+|+++.|.|.+.+.+. +.+.|+++ +..+....++.... ...|.|.+
T Consensus 74 ~~~~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~---~~~L~i~~ 150 (292)
T 4dkd_C 74 PLGGSAAIHLYVKDPARPWNVLAQEVVVFEDQDALLPCLLTDPVLEAGVSLVRVRGRPLMRHTNYSFSP---WHGFTIHR 150 (292)
T ss_dssp ---CCEEECCEECCSSCCEEESCSEEEEETTSCEECCEEESSGGGGSSEEEEEGGGCCCCSSCCEECCS---SSCCEETT
T ss_pred CCCcceEEEEEEcCccccccccCCeEEEcCCCcEEEeeeCCCCCcceeEEEEecCCCccccCCcccccC---CceEEECC
Confidence 888888889999888763 55677788999999999999998322 78999997 55555544443221 22399999
Q ss_pred cCcccceEEEEEEEcCCeeeE-EEEEEEEeCCCCCCCCCceecccccceEEEEecCCCCCCCeeeeEEEEEEEcCCCCce
Q psy7042 1853 IRKEDAGDYTVNLSNSSGSVS-GTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHW 1931 (2245)
Q Consensus 1853 ~~~~d~G~Y~C~a~n~~g~~~-~~~~l~v~~~p~~~~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~ 1931 (2245)
+..+|+|.|+|.|.|..|... ..+.|.|...
T Consensus 151 ~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~------------------------------------------------ 182 (292)
T 4dkd_C 151 AKFIQSQDYQCSALMGGRKVMSISIRLKVQKV------------------------------------------------ 182 (292)
T ss_dssp CCGGGCSEEEEEECSTTSCEECCCEEEEEECC------------------------------------------------
T ss_pred CCHHHCeEEEEEEEeCCCceeEEEEEEEEeCC------------------------------------------------
Confidence 999999999999988765332 1333333211
Q ss_pred EEEeeecCcceEEecCCCCCCeEEEEEEEECCCCCCCCCCCcCceeccCCCCCCCCCCCcEEEEEcCCeEEEEEeccCCC
Q psy7042 1932 ICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDD 2011 (2245)
Q Consensus 1932 ~~~~~~~~~~~~~i~~l~~~~~y~~~~~a~n~~g~~~~s~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~ 2011 (2245)
T Consensus 183 -------------------------------------------------------------------------------- 182 (292)
T 4dkd_C 183 -------------------------------------------------------------------------------- 182 (292)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCceeEEEEEEeeecCccceEEEEEEeccceEEeCCCcCCceEEEEEEEEeccccCCCcCCCCcccccCcccCCCceEE
Q psy7042 2012 GGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEII 2091 (2245)
Q Consensus 2012 ~~~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~s~~v~~~~~~~~~~p~~~ 2091 (2245)
...+|.+.
T Consensus 183 ------------------------------------------------------------------------~~~~p~i~ 190 (292)
T 4dkd_C 183 ------------------------------------------------------------------------IPGPPALT 190 (292)
T ss_dssp ------------------------------------------------------------------------CCSSCEEE
T ss_pred ------------------------------------------------------------------------CCCCCeEE
Confidence 01134444
Q ss_pred eeccceeeecCccEEEEEEEEeeCC-CeEEEeeCCEeeCCCCcEEEEEe--CcEEEEEEcCCCCCCCeEEEEEEEeCCce
Q psy7042 2092 VPLRNANAIQNHNAQFQCTITGCPK-PTISWLKGSREITPSARHHIFAE--GDTYTLIINSVYGVDADEYVCRAVNKGGV 2168 (2245)
Q Consensus 2092 ~~~~~~~~~~g~~v~l~C~~~g~P~-p~i~W~~~g~~l~~~~~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~ 2168 (2245)
..+....+.+|+.++|.|.+.|.|+ +.+.|++++..+........... .....|.|.++..+|+|.|+|.|.|..|.
T Consensus 191 ~~~~~~~~~~g~~v~l~C~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~ 270 (292)
T 4dkd_C 191 LVPAELVRIRGEAAQIVCSASSVDVNFDVFLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGK 270 (292)
T ss_dssp EESSCBCCCSSSCEEEEEEEEESSSCCEEECCBSSCCCCCCBEEEEETTEEEEEEEEEESSCCTTSCEEEEEEEECSSCE
T ss_pred ccCCceeEecCCCEEEEEEecCCCCceEEEEeCCCcccccCccceeccceeeeEEEEEECccChhcCeEEEEEEecCCCC
Confidence 4455555678999999999998775 56999999987765443222111 12247999999999999999999999999
Q ss_pred eeEEEEEEEEcCCC
Q psy7042 2169 KSTKAELIIMTAPK 2182 (2245)
Q Consensus 2169 ~~~~~~l~V~~~p~ 2182 (2245)
.+.++.|.|.....
T Consensus 271 ~~~~~~l~V~~~~~ 284 (292)
T 4dkd_C 271 HSTSMFFRVVESAG 284 (292)
T ss_dssp EEEEEEECC-----
T ss_pred ceeEEEEEEeeCCC
Confidence 99999999976543
No 100
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=99.91 E-value=2.7e-23 Score=250.41 Aligned_cols=272 Identities=15% Similarity=0.126 Sum_probs=211.5
Q ss_pred eEeeCCCeEEEEEeeeec-------CCCeEEEEeCCeEeeccCeEEEEecCCeEEEEEcCCCCCcCEEEEEEEEeCCCCc
Q psy7042 586 AYFDKGENVVVKIPFTGY-------PKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMD 658 (2245)
Q Consensus 586 ~~~~~g~~~~l~C~~~g~-------p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~ 658 (2245)
..+..|++++|.|.+.+. |.+.|.|+++|..+... ++.+. .+....|.|.++...+ |.|+|.|.|. |..
T Consensus 14 ~~v~~G~~v~l~C~~~~~~~~~~~~p~p~i~W~~~g~~i~~~-~~~~~-~~~~~~L~i~~~~~~~-g~Y~C~a~~~-g~~ 89 (303)
T 1i1r_A 14 PVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKE-QYTII-NRTASSVTFTDIASLN-IQLTCNILTF-GQL 89 (303)
T ss_dssp CEEETTCCEEEEEEECHHHHHHHTCCGGGEEEEETTEECCGG-GCEEE-ETTEEEEEECSCCCSE-EEEEEEEEET-TTE
T ss_pred ceEeCCCCEEEEEEECCccccccCCChhheEEEECCEECChh-heeee-CCcEEEEEEcCcCCCc-eEEEEecccC-CCc
Confidence 457889999999999864 88999999999988654 44433 3346789999999885 9999999884 433
Q ss_pred ---eeEEEEEeeCCCCCCCCCeeeeecCCcEEEEeeCCCCCCCcccccEEEEeeeCCCCCeEEE-ceeeeeeEEEecC-C
Q psy7042 659 ---SAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRV-GNTRFTTMAITGL-S 733 (2245)
Q Consensus 659 ---~~~~~l~v~~~P~~p~~~~~~~~~~~si~lsW~~p~~~~~~~~~~y~v~~~~~~~~~w~~~-~~~~~~~~~i~~L-~ 733 (2245)
...+.+.+..+|.+|.++.+...+.++++|+|.+|... + .+.+|.|+++......|... .......+.+.+| .
T Consensus 90 ~~~~~~~~l~v~~~P~~P~~l~~~~~~~~~v~l~W~~~~~~-~-~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~~ 167 (303)
T 1i1r_A 90 EQNVYGITIISGLPPEKPKNLSCIVNEGKKMRCEWDGGRET-H-LETNFTLKSEWATHKFADCKAKRDTPTSCTVDYSTV 167 (303)
T ss_dssp EEEEEEEEEEEECCCCCCEEEEEEEETTSCCEEEEECCSCC-S-SCCEEEEEEEETTEECCCEECCSSCTTEEECSSCCC
T ss_pred ceEEEEEEEeccCCCCCCeeeEEEECCCCcEEEEccCCCCC-C-CCcCEEEEEEecCCCCccCCCcCCCceEEEECCcCc
Confidence 34467788899999999999888889999999976543 3 35799999986543333222 2233468999999 9
Q ss_pred CCCEEEEEEEEEecccCCCCCCCCccEEecCccccccccccccccCCCceeecccccccccCCceEEEEeeeccCccccc
Q psy7042 734 PGHQYEFRVYAENVYGRSDPSTTSDLITTKDTFKKQIKKRQYDFDETGKKIRGKADEKVSDYDQYVFDIYSKYVPQPVDI 813 (2245)
Q Consensus 734 p~t~y~~~v~a~n~~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 813 (2245)
|++.|.|+|.|.|..|.+.++.. . +.+.
T Consensus 168 p~t~Y~f~V~A~N~~G~~~s~~~-~-~~~~-------------------------------------------------- 195 (303)
T 1i1r_A 168 YFVNIEVWVEAENALGKVTSDHI-N-FDPV-------------------------------------------------- 195 (303)
T ss_dssp TTSCEEEEEEEEETTEEEECCCE-E-ECGG--------------------------------------------------
T ss_pred ccccEEEEEEEEcCCCCcccCCE-E-ECHH--------------------------------------------------
Confidence 99999999999999997643210 0 0000
Q ss_pred cccceecccccccccccCceeEEEEeeecccCCeeEEEeeccCCchhhhhhheeeeeeeccCCCceEeecccccCCcceE
Q psy7042 814 KTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLHDAFEDDDEMV 893 (2245)
Q Consensus 814 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 893 (2245)
T Consensus 196 -------------------------------------------------------------------------------- 195 (303)
T 1i1r_A 196 -------------------------------------------------------------------------------- 195 (303)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEEecCCCCCcccEEeee--eCceEEEEecCCCCCCCCccceEEEeeeecCCCceEEecc---eeeeceEEEecCCCC
Q psy7042 894 LIFEVLDRPHPPENLHADEF--AGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSS---YVTTPFVRVRNLAIG 968 (2245)
Q Consensus 894 ~~~~~~~~P~~p~~l~~~~~--~~~~~~l~W~~p~~~~g~~i~~y~i~~~~~~~~~~~~~~~---~~~~~~~~i~~L~p~ 968 (2245)
...+|.||.++.+... +.+++.|+|++|...+| .+.+|+|+|+..+...|..+.. ......+.|.+|.|+
T Consensus 196 ----~~~~p~pP~~~~v~~~~~~~~sv~l~W~~p~~~~~-~i~~Y~v~y~~~~~~~w~~~~~~~~~~~~~~~~l~~L~p~ 270 (303)
T 1i1r_A 196 ----YKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSV-IILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPF 270 (303)
T ss_dssp ----GGEECCCCEEEEEECCSSSSSCEEEEEECCGGGGT-SCEEEEEEEEETTCSSCEECCGGGGCSCCSEEEECSCCTT
T ss_pred ----HeEecCCCcceEEEEecCCCCEEEEEECCCCCCCc-ccEEEEEEEEeCCCCCceEEccccCCCceeEEEeCCCCCC
Confidence 0026788998888654 67899999999977655 8999999999987778887754 345678999999999
Q ss_pred ceeeEEEEEEeccccCCCccccCcccccCCCC
Q psy7042 969 STYEFRVMAENQYGLSKPALTIDPIKAKHPFD 1000 (2245)
Q Consensus 969 ~~y~~~v~a~n~~g~~~~s~~~~~~~~~t~~~ 1000 (2245)
+.|.|+|+|.|..|.|++|..+..+.++|+++
T Consensus 271 t~Y~~rV~A~n~~G~G~~S~wS~~~~~~T~e~ 302 (303)
T 1i1r_A 271 TEYVFRIRCMKEDGKGYWSDWSEEASGITYED 302 (303)
T ss_dssp CEEEEEEEEEETTSCSCCCCCCCCEEEECCCC
T ss_pred CEEEEEEEeccCCCCCCcCCCCCccceeCCcC
Confidence 99999999999999999998888887777654
No 101
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.90 E-value=4.5e-23 Score=231.48 Aligned_cols=188 Identities=25% Similarity=0.452 Sum_probs=167.0
Q ss_pred CCCCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECCeeccCC-CeEEEEE-cCcEEEEEEeeeccCCCeEEEEEE
Q psy7042 88 GEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSG-ARYRVET-AGGVFRLHFNEVTDVDNGDYTCEA 165 (2245)
Q Consensus 88 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~-~~~~~~~-~~~~~~L~i~~~~~~d~G~Y~C~a 165 (2245)
+.+|.|+..+..+.+.+|+.++|.|.+.|.|.+.+.|+|+|..+... .++.+.. .++...|.|.+++.+|+|.|+|.|
T Consensus 2 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 81 (197)
T 2j8h_A 2 AMAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRA 81 (197)
T ss_dssp -CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEE
T ss_pred CCCCEEEEcCCccEEcCCCEEEEEEEEeecCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEE
Confidence 36899999999999999999999999999999999999999998754 4666653 566678999999999999999999
Q ss_pred EcCcccceeEEEEEecCCCeeecC-----CCceEEcCCCeEEEEEEEecCCCceEEEeeCceeeecCCceEEEEeCCeEE
Q psy7042 166 YNSVGFAHTSSRVKIGTPPRIDRM-----PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYII 240 (2245)
Q Consensus 166 ~n~~g~~~~~~~l~V~~~P~~~~~-----~~~~~v~~G~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~ 240 (2245)
.|..|..+.++.|.|..+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|+|+|..+....++.+...+....
T Consensus 82 ~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~ 161 (197)
T 2j8h_A 82 TNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTS 161 (197)
T ss_dssp EETTEEEEEEEEEEEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEEEEESCCEEEEEESSCEECSSSSCEEEECSSEEE
T ss_pred EECCCceeEEEEEEEcCCCcCCCCccccccCeEEEeCCCEEEEEEEEEecCCCcEEEEECCEEeecCCCEEEEEcCCceE
Confidence 999999888999999887776433 356778999999999999999999999999999998888888877777889
Q ss_pred EEEcc-cCccCceeEEEEEEcCCcceEEEEEEEEec
Q psy7042 241 IFIKE-IRKEDAGDYTVNLSNSSGSVSGTFTINITG 275 (2245)
Q Consensus 241 L~i~~-~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 275 (2245)
|.|.+ +..+|+|.|+|.|.|..|..+.++.|.|.+
T Consensus 162 L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~d 197 (197)
T 2j8h_A 162 LVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVAD 197 (197)
T ss_dssp EECTTCCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEeCCCCcccCEeEEEEEEeCCCcEeEEEEEEEeC
Confidence 99999 999999999999999999999999999863
No 102
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.90 E-value=3.4e-23 Score=244.72 Aligned_cols=157 Identities=18% Similarity=0.256 Sum_probs=118.2
Q ss_pred CCCceeccCCceEEcCCCeEEEEEEecC-cCCC--eEEEeeCCEeccCCceEEEEecCcEEEEEEeee---ccCCCeE--
Q psy7042 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATG-TPVP--KCRWLRNGREISSGARYRVETAGGVFRLHFNEV---TDVDNGD-- 1767 (2245)
Q Consensus 1696 ~~p~~~~~~~~~~~~~G~~v~L~C~~~~-~p~~--~v~W~~~~~~l~~~~~~~~~~~~~~~~L~i~~v---~~~d~G~-- 1767 (2245)
.+|.+..+ ..+.+|++++|.|.+.| .|.+ .+.|+|+|..+.. .+...+.. |.+..+ +.+|+|.
T Consensus 5 ~~p~~~~~---~~v~~G~~v~l~C~~~g~~p~p~~~v~W~k~~~~l~~----~~~~~~~~--~~~~~~~~~~~~d~g~g~ 75 (265)
T 2oz4_A 5 TPPQLVSP---RVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP----TVTYGNDS--FSAKASVSVTAEDEGTQR 75 (265)
T ss_dssp SCCEEECC---SEEETTEEEEEEEEEESCSCGGGCEEEEEETTEECCC----EEEECSSE--EEEEEEEEECGGGCEEEE
T ss_pred CCCccccC---ceEecCCCEEEEEEccCCCCCcceEEEEEeCCEECCc----eEeeCCCe--EEEEeecccccccCCcce
Confidence 34555433 47899999999999988 7766 9999999998864 23333333 555554 7788885
Q ss_pred EEEEEecCceeeEEEEEEEecCCCccccCCCceEEcCCCeEEEEEEEeccCCcEEEEEECCEEeecCCceEEEEcCCeEE
Q psy7042 1768 YTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYII 1847 (2245)
Q Consensus 1768 Y~C~~~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~ 1847 (2245)
|+|.+.|..|.....+.|.|...|.....+....+.+|+.+.|.|.+. |.+.++| +|+.+... +....
T Consensus 76 Y~C~a~n~~~~~~~~~~l~V~~~p~p~~~~~~~~v~~G~~v~l~C~~~--p~~~i~W--~g~~~~~~--------~~~~~ 143 (265)
T 2oz4_A 76 LTCAVILGNQSQETLQTVTIYSFPAPNVILTKPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQPL--------GPRAQ 143 (265)
T ss_dssp EEEEEEETTEEEEEEEEEEEECCCCCEEEESCSEEETTCEEEEEEECC--TTSEEEE--SSCSSSCC--------SSEEC
T ss_pred EEEEEecCCCCcEEEEEEEEeCCCCceeecCCceecCCCcEEEEEEcc--CCCEEEE--CCEEccCC--------CCcEE
Confidence 999999999998889999997633322223456788899999999998 8899999 88776322 23356
Q ss_pred EEEcccCcccceEEEEEEEcCC-eeeE
Q psy7042 1848 IFIKEIRKEDAGDYTVNLSNSS-GSVS 1873 (2245)
Q Consensus 1848 l~i~~~~~~d~G~Y~C~a~n~~-g~~~ 1873 (2245)
|.|..+..+|.|.|+|.|.|.. |...
T Consensus 144 l~i~~~~~~~~g~Y~C~a~n~~~g~~~ 170 (265)
T 2oz4_A 144 LLLKATPEDNGRSFSCSATLEVAGQLI 170 (265)
T ss_dssp CEEECCGGGTTEEEEEEEEEECSSSEE
T ss_pred EEEccccccCCceEEEEEEcCCCCCcc
Confidence 8899999999999999998654 5443
No 103
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.90 E-value=8.1e-23 Score=229.76 Aligned_cols=188 Identities=26% Similarity=0.529 Sum_probs=172.1
Q ss_pred CCCCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECCeeccCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEEc
Q psy7042 88 GEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYN 167 (2245)
Q Consensus 88 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 167 (2245)
..+|.|...+..+.+.+|+.++|.|.+.+.|.+.+.|+|++..+....++.+...++..+|.|.+++.+|+|.|+|.|.|
T Consensus 5 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n 84 (197)
T 3lcy_A 5 GEAPGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIATN 84 (197)
T ss_dssp CEEEEEEECCCCEEEETTSEEEEEEEEEEESCCEEEEEETTEEECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEEEEC
T ss_pred CCCCcccccCCceEEeCCCcEEEEEEEecCCCCEEEEEECCEECCCCccEEEEeCCCEEEEEEecCCccCCEEEEEEEEC
Confidence 46899999999999999999999999999999999999999999988899999888888999999999999999999999
Q ss_pred CcccceeEEEEEecCCCeeecC---CCceEEcCCCeEEEEEEEecCCCceEEEeeCceeeecCCceEEEEeCCeEEEEEc
Q psy7042 168 SVGFAHTSSRVKIGTPPRIDRM---PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIK 244 (2245)
Q Consensus 168 ~~g~~~~~~~l~V~~~P~~~~~---~~~~~v~~G~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~ 244 (2245)
..|....++.|.|..+|.+... +....+.+|+.+.|.|.+.|.|.+.+.|+++|..+....++.+...+....|.|.
T Consensus 85 ~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~ 164 (197)
T 3lcy_A 85 EVGEVETSSKLLLQATPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQNSENITIENTEHYTHLVMK 164 (197)
T ss_dssp SSCEEEEEEEEEEEEEEEECTTSCCCSEEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECSSEEEEEES
T ss_pred CCCceeEEEEEEEEcCCCCCCCccCCcceeecCCCeEEEEEEEeeeeCCeeEEeECCEECCCCCceEEEEcCCEEEEEEc
Confidence 9999888999999888876543 4566789999999999999999999999999999998888888877777899999
Q ss_pred ccCc-cCceeEEEEEEcCCcceEEEEEEEEec
Q psy7042 245 EIRK-EDAGDYTVNLSNSSGSVSGTFTINITG 275 (2245)
Q Consensus 245 ~~~~-~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 275 (2245)
++.. +|+|.|+|.|.|..|..+.++.|.|.+
T Consensus 165 ~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 196 (197)
T 3lcy_A 165 NVQRKTHAGKYKVQLSNVFGTVDAILDVEIQD 196 (197)
T ss_dssp SCCHHHHCEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred cccchhhCceEEEEEEcCcCceEEEEEEEEec
Confidence 9995 899999999999999999999999864
No 104
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.90 E-value=8.1e-23 Score=245.88 Aligned_cols=269 Identities=14% Similarity=0.176 Sum_probs=179.1
Q ss_pred CceeccCCceEEcCCCeEEEEEEecCcCCCeEEEeeCCEeccCCceEEEEecC-cEEEEEEeeeccCCCeEEEEEEecCc
Q psy7042 1698 PDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAG-GVFRLHFNEVTDVDNGDYTCEAYNSV 1776 (2245)
Q Consensus 1698 p~~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~~~~l~~~~~~~~~~~~-~~~~L~i~~v~~~d~G~Y~C~~~n~~ 1776 (2245)
|.|.....++.+.+|++++|.|.+.+. +.|++++..+. .+......+ ...+|.|.+++.+|+|.|+|.|.|..
T Consensus 1 P~i~~~~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~~~--~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~ 74 (289)
T 3mjg_X 1 LVVTPPGPELVLNVSSTFVLTCSGSAP----VVWERMSQEPP--QEMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHNDSR 74 (289)
T ss_dssp CCBCSSCSEEECCTTCCEEEEEEESSC----CEEEBTTBCCS--EEEEECTTSCEEEEEEECSCCGGGCEEEEEECCC--
T ss_pred CeecCCCCeEEEeCCCcEEEEEeccce----EEEECCCCCcc--cceeccCCCceeEEEEEccCChhhCEEEEEEEcccC
Confidence 344444556889999999999999874 99999998873 233332222 24679999999999999999999988
Q ss_pred ee---eEEEEEEEecCCCc--cccCCCc--eEEcCCCeEEEEEEEeccCCcEEEEEECCEEeecCCceEEEEcCCeEEEE
Q psy7042 1777 GF---AHTSSRVKIGTPPR--IDRMPNA--LYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIF 1849 (2245)
Q Consensus 1777 g~---~~~~~~l~V~~~p~--~~~~~~~--~~~~~g~~~~l~C~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~l~ 1849 (2245)
|. ...+..|.|..++. +...+.. ..+.+|+.+.|.|.+. .|.+.++|++++........+ ......+
T Consensus 75 g~~~~~~~~~~v~v~~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~w~~~~~~~~~~~~~----~~~~~~~- 148 (289)
T 3mjg_X 75 GLETDERKRLYIFVPDPTVGFLPNDAEELFIFLTEITEITIPCRVT-DPQLVVTLHEKKGDVALPVPY----DHQRGFS- 148 (289)
T ss_dssp ----CCCEEEEEECCCTTCCBCCCCHHHHEEEESSCCCEEECCCBS-CTTSCEEEEESSCCSCCCCCE----ETTTEEE-
T ss_pred CCCcCcEEeEEEEEECCCcCcccCCCCcceEEeecCCeEEEEeEcC-CCCceEEEEeCCCCCccceee----cCCcCee-
Confidence 76 33455566653322 2222121 6789999999999998 677889999865222111111 1111111
Q ss_pred EcccCcccceEEEEEEEcCCeeeEE-EEEEEEeCCCCCCCCCceecccccceEEEEecCCCCCCCeeeeEEEEEEEcCCC
Q psy7042 1850 IKEIRKEDAGDYTVNLSNSSGSVSG-TFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISM 1928 (2245)
Q Consensus 1850 i~~~~~~d~G~Y~C~a~n~~g~~~~-~~~l~v~~~p~~~~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~ 1928 (2245)
...|+|.|+|.|.|..+.... .+.+.|...
T Consensus 149 ----~~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~~--------------------------------------------- 179 (289)
T 3mjg_X 149 ----GIFEDRSYICKTTIGDREVDSDAYYVYRLQV--------------------------------------------- 179 (289)
T ss_dssp ----ECCCSSEEEEEEEETTEEEECCCEEEEECCC---------------------------------------------
T ss_pred ----eeccCcEEEEEEEeCCceeeeeeEEEEecCC---------------------------------------------
Confidence 256889999988876553321 122222100
Q ss_pred CceEEEeeecCcceEEecCCCCCCeEEEEEEEECCCCCCCCCCCcCceeccCCCCCCCCCCCcEEEEEcCCeEEEEEecc
Q psy7042 1929 PHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKP 2008 (2245)
Q Consensus 1929 ~~~~~~~~~~~~~~~~i~~l~~~~~y~~~~~a~n~~g~~~~s~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~v~l~W~~p 2008 (2245)
T Consensus 180 -------------------------------------------------------------------------------- 179 (289)
T 3mjg_X 180 -------------------------------------------------------------------------------- 179 (289)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCceeEEEEEEeeecCccceEEEEEEeccceEEeCCCcCCceEEEEEEEEeccccCCCcCCCCcccccCcccCCCc
Q psy7042 2009 LDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAP 2088 (2245)
Q Consensus 2009 ~~~~~~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~s~~v~~~~~~~~~~p 2088 (2245)
.+|
T Consensus 180 -----------------------------------------------------------------------------~~p 182 (289)
T 3mjg_X 180 -----------------------------------------------------------------------------SSI 182 (289)
T ss_dssp -----------------------------------------------------------------------------CCC
T ss_pred -----------------------------------------------------------------------------CCC
Confidence 123
Q ss_pred eEEeeccceeeecCccEEEEEEEEeeCCCeEEEeeCCEeeCCCCcEEEEE-----eCcEEEEEEcCCCCCCCeEEEEEEE
Q psy7042 2089 EIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFA-----EGDTYTLIINSVYGVDADEYVCRAV 2163 (2245)
Q Consensus 2089 ~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~-----~~~~~~L~i~~v~~~d~G~Y~C~a~ 2163 (2245)
.+...+.+..+.+|++++|.|.+.|.|.|.|.|+++++.+.......... ......|.|.++..+|+|.|+|.|.
T Consensus 183 ~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 262 (289)
T 3mjg_X 183 NVSVNAVQTVVRQGENITLMCIVIGNEVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVT 262 (289)
T ss_dssp CCEEEESCSEEETTSCEEEEEEEESCSSBEEEEECTTSSSSCCCCCEEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEE
T ss_pred CcEEeCCcceeEcCCCEEEEEEECCCCCcceEEEcCCccCCCcccccccccCCcceEEEEEEEEcccChhhCcEEEEEee
Confidence 34444444568899999999999999999999998876544322211111 1234689999999999999999999
Q ss_pred eCCceeeEEEEEEEEcCCCCC
Q psy7042 2164 NKGGVKSTKAELIIMTAPKFN 2184 (2245)
Q Consensus 2164 N~~G~~~~~~~l~V~~~p~~~ 2184 (2245)
|.+|..+.++.|+|...+...
T Consensus 263 N~~G~~~~~~~l~v~~~~~~~ 283 (289)
T 3mjg_X 263 ESVNDHQDEKAINITVVESGH 283 (289)
T ss_dssp ETTTTEEEEEEEEEEEEC---
T ss_pred cCCCCceeEEEEEEEEEecCc
Confidence 999999999999998877654
No 105
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.90 E-value=1.4e-23 Score=255.20 Aligned_cols=171 Identities=21% Similarity=0.223 Sum_probs=132.7
Q ss_pred cccccceeeEEEE-eccCcCeEEEEeCCeecCCCccEEEEeeC---CeEEEEEecccccCCceEEEEEEeCCCCCCc--c
Q psy7042 492 AIQNHNAQFQCTI-TGCPKPTISWLKGSREITPSARHHIFAEG---DTYTLIINSVYGVDADEYVCRAVNKGGVKST--K 565 (2245)
Q Consensus 492 ~~~g~~~~l~C~~-~g~p~~~v~W~~~~~~i~~~~~~~~~~~~---~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~--~ 565 (2245)
...|+.+.|.|.+ .|.|.+.++|++++..+...... ..++ ....|.|..+..+|+|.|+|.|.|..|.... +
T Consensus 126 ~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~~~~--~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~ 203 (308)
T 4fom_A 126 DGGNETVAAICIAATGKPVAHIDWEGDLGEMESTTTS--FPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYS 203 (308)
T ss_dssp TTCSCEEEEEEEEEEEBSCCEEEECCCSSBCCEEEEE--CTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEE
T ss_pred EcCCceEEEEEEecCCcCCceEEEEECCcccccccce--eeeecccccccceEEeeeecCCccEEEEEEccCCCCceEEe
Confidence 3457789999985 68999999999999887543211 1111 1237999999999999999999999877654 4
Q ss_pred eeEeEecCCCCCCCCCcccceEeeCCCeEEEEEeeeecCCC-eEEEEeCCeEeeccCeEEEEecCCeEEEEEcCCCCCcC
Q psy7042 566 AELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKP-KITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDT 644 (2245)
Q Consensus 566 ~~l~v~~~p~~~~~p~~~~~~~~~~g~~~~l~C~~~g~p~~-~i~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 644 (2245)
+.|.|..+|.+...+. ....+..|+.++|.|.+.|.|+| .++|+|++..+..... ......|.|.+++.+|+
T Consensus 204 ~~l~V~~~P~~~~~~~--~~~~~~~g~~v~l~C~~~g~P~p~~v~W~k~~~~~~~~~~-----~~~~~~l~i~~v~~~d~ 276 (308)
T 4fom_A 204 FILDIQYAPEVSVTGY--DGNWFVGRKGVNLKCNADANPPPFKSVWSRLDGQWPDGLL-----ASDNTLHFVHPLTFNYS 276 (308)
T ss_dssp EECCCCEEEEECCBCC--CSCEETTCCSCEEECCEEEESCEEEEECCBSSSCCCSSCB-----CSTTEEECCSCCCSCCC
T ss_pred EEEEEecCCeeEEccc--ceeeeeccccEEEEEEEecCCCCcEEEEEECCeECCCcEE-----EcCCeEEEECCCChhhC
Confidence 5666777776654332 23456778999999999999988 6999999987765422 23346778999999999
Q ss_pred EEEEEEEEeCCCCceeEEEEEeeCCCC
Q psy7042 645 APYRVVAENDLGMDSAIVKIQISDRPD 671 (2245)
Q Consensus 645 g~y~C~a~n~~g~~~~~~~l~v~~~P~ 671 (2245)
|.|+|.|.|.+|..+..+.|.|.++|.
T Consensus 277 G~Y~C~A~N~~G~~~~~~~l~V~~~P~ 303 (308)
T 4fom_A 277 GVYICKVTNSLGQRSDQKVIYISDPPH 303 (308)
T ss_dssp SEEEEEEEETTEEEEEEEECCEECCC-
T ss_pred EEEEEEEEeCCCcEEEEEEEEEEcCCC
Confidence 999999999999999999999998875
No 106
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.90 E-value=2.4e-22 Score=227.88 Aligned_cols=190 Identities=24% Similarity=0.335 Sum_probs=160.4
Q ss_pred CCCCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECCeeccCCCeEEEEEc-CcEEEEEEeee-ccCCCeEEEEEE
Q psy7042 88 GEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETA-GGVFRLHFNEV-TDVDNGDYTCEA 165 (2245)
Q Consensus 88 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~-~~~~~L~i~~~-~~~d~G~Y~C~a 165 (2245)
..+|.|+..|.++.+.+|+.++|.|.+.|.|.+.|.|+|+|..+.......+... +....|.|.++ +.+|+|.|+|.|
T Consensus 4 ~~~P~~~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a 83 (212)
T 2yd6_A 4 ETPPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVA 83 (212)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEEE
T ss_pred CCCCeEEeCcceeEEecCCeEEEEEEEeeCCCCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEEEE
Confidence 3589999999999999999999999999999999999999999986654433333 34567999999 599999999999
Q ss_pred EcCcccceeEEEEEecCC-------CeeecCCCceEEcCCCeEEEEEEEecCCCceEEEeeCceeeecC---CceEEEEe
Q psy7042 166 YNSVGFAHTSSRVKIGTP-------PRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSD---DRFKFTVL 235 (2245)
Q Consensus 166 ~n~~g~~~~~~~l~V~~~-------P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~i~W~~~g~~l~~~---~~~~~~~~ 235 (2245)
.|..|....++.|.|..+ |.+...|....+.+|+.+.|.|.+.|.|.+.+.|+|+|..+... .++.....
T Consensus 84 ~n~~g~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~ 163 (212)
T 2yd6_A 84 SNNVGEISVSTRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQLRS 163 (212)
T ss_dssp EETTEEEEEEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEEC------CCEEEEEE
T ss_pred EcCCCcEEEEEEEEEeccCccCCCcceeecCCcceeEecCCCEEEEEEecCCCCCeEEEEECCccccCcCCCceEEEEec
Confidence 999999888899999764 67777888889999999999999999999999999999998754 45555555
Q ss_pred CCeEEEEEcccCccCceeEEEEEEcCCcce-EEEEEEEEecCC
Q psy7042 236 DDYIIIFIKEIRKEDAGDYTVNLSNSSGSV-SGTFTINITGLP 277 (2245)
Q Consensus 236 ~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~p 277 (2245)
+....|.|.++..+|+|.|+|.|.|..|.. +..+.|.|...+
T Consensus 164 ~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~~a~l~~~~~~ 206 (212)
T 2yd6_A 164 ESIGALQIEQSEESDQGKYECVATNSAGTRYSAPANLYVRGTK 206 (212)
T ss_dssp TTEEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred CCeEEEEEcCCCcccCEEEEEEEECCCCccccccccEEEEecc
Confidence 667899999999999999999999999986 457888887654
No 107
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.90 E-value=8.1e-24 Score=257.22 Aligned_cols=226 Identities=15% Similarity=0.139 Sum_probs=169.3
Q ss_pred eeceEEECCCccCCcEEEEEEEEcCCCCCCCCCccccEEEeeccCCCCCceecCCcceEEeCCCeEEEEEEE-eeecCCc
Q psy7042 43 LECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEA-TGTPVPK 121 (2245)
Q Consensus 43 ~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~~~v~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~-~g~p~~~ 121 (2245)
.+++|.|.+++.+|+|.|+|.|.|..+.... ..+.+.+.. ...+.+...+.......|+.+.|.|.+ .|.|.+.
T Consensus 72 ~~~sL~I~~v~~~D~G~Y~C~a~n~~~~~~~----~~~~~~v~~-~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~~ 146 (308)
T 4fom_A 72 NDATITLHNIGFSDSGKYICKAVTFPLGNAQ----SSTTVTVLV-EPTVSLIKGPDSLIDGGNETVAAICIAATGKPVAH 146 (308)
T ss_dssp SBCCEEECSCCGGGCEEEEEEEEETTTEEEE----EEEEEEEEB-CCEEEEEECSSCCCTTCSCEEEEEEEEEEEBSCCE
T ss_pred CceEEEEccCCHHHCEEEEEEEeeCCCccee----eeeEEEeee-ccccccccccceeEEcCCceEEEEEEecCCcCCce
Confidence 3468999999999999999999986433221 122222222 122233445556667789999999986 6899999
Q ss_pred eEEEECCeeccCCCeEEEE-EcCcEEEEEEeeeccCCCeEEEEEEEcCccccee--EEEEEecCCCeeecCC-CceEEcC
Q psy7042 122 CRWLRNGREISSGARYRVE-TAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHT--SSRVKIGTPPRIDRMP-NALYIPE 197 (2245)
Q Consensus 122 i~W~~~g~~l~~~~~~~~~-~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~--~~~l~V~~~P~~~~~~-~~~~v~~ 197 (2245)
|.|+|++..+......... .......|.|..+..+|+|.|+|.|.|..|.... ++.|.|..+|.+...+ ....+.+
T Consensus 147 i~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~ 226 (308)
T 4fom_A 147 IDWEGDLGEMESTTTSFPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQYAPEVSVTGYDGNWFVG 226 (308)
T ss_dssp EEECCCSSBCCEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCCEEEEECCBCCCSCEETT
T ss_pred EEEEECCcccccccceeeeecccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEecCCeeEEcccceeeeec
Confidence 9999999887643211100 0011236999999999999999999998876544 5667788888876554 4567788
Q ss_pred CCeEEEEEEEecCCCc-eEEEeeCceeeecCCceEEEEeCCeEEEEEcccCccCceeEEEEEEcCCcceEEEEEEEEecC
Q psy7042 198 GDNTKVKIFYAGDQPM-EVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGL 276 (2245)
Q Consensus 198 G~~~~l~C~~~g~p~~-~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 276 (2245)
|+.++|.|.+.|.|+| .+.|+|++..+..... ..+...|.|.++..+|+|.|+|.|.|..|..+.++.|.|.++
T Consensus 227 g~~v~l~C~~~g~P~p~~v~W~k~~~~~~~~~~-----~~~~~~l~i~~v~~~d~G~Y~C~A~N~~G~~~~~~~l~V~~~ 301 (308)
T 4fom_A 227 RKGVNLKCNADANPPPFKSVWSRLDGQWPDGLL-----ASDNTLHFVHPLTFNYSGVYICKVTNSLGQRSDQKVIYISDP 301 (308)
T ss_dssp CCSCEEECCEEEESCEEEEECCBSSSCCCSSCB-----CSTTEEECCSCCCSCCCSEEEEEEEETTEEEEEEEECCEECC
T ss_pred cccEEEEEEEecCCCCcEEEEEECCeECCCcEE-----EcCCeEEEECCCChhhCEEEEEEEEeCCCcEEEEEEEEEEcC
Confidence 9999999999999988 6999999988765432 123446778999999999999999999999999999999988
Q ss_pred CC
Q psy7042 277 PG 278 (2245)
Q Consensus 277 p~ 278 (2245)
|.
T Consensus 302 P~ 303 (308)
T 4fom_A 302 PH 303 (308)
T ss_dssp C-
T ss_pred CC
Confidence 74
No 108
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.90 E-value=7.2e-23 Score=228.35 Aligned_cols=179 Identities=21% Similarity=0.281 Sum_probs=147.3
Q ss_pred CCceecCCcceEEeCCCeEEEEEEEe-eecCCceEEEECCeeccCCCeEEEEEcC--cEEEEEEeeeccCCCeEEEEEEE
Q psy7042 90 KPDFIVPLKDLVVPLGKLLTLQCEAT-GTPVPKCRWLRNGREISSGARYRVETAG--GVFRLHFNEVTDVDNGDYTCEAY 166 (2245)
Q Consensus 90 ~P~~~~~~~~~~v~~G~~v~L~C~~~-g~p~~~i~W~~~g~~l~~~~~~~~~~~~--~~~~L~i~~~~~~d~G~Y~C~a~ 166 (2245)
+|.|..++ +..+.+|+.+.|.|.+. +.|.|+|.|+|||..|..+.++.+..++ +..+|.|.+++.+|+|.|+|.|.
T Consensus 3 ~p~~~~~~-~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~ 81 (207)
T 3rbs_A 3 DPFTKSEL-AVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQ 81 (207)
T ss_dssp ---CCEEE-EEEECGGGCEEEEEECSCCCSCCEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEE
T ss_pred CCeeecCC-ceEEEeCCeEEEEEEEecCCCCCEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEE
Confidence 57777655 57899999999999996 4799999999999999988888877655 77789999999999999999999
Q ss_pred cCcccceeEEEEEec---------------------CCCeeecCCCceEEcCCCeEEEEEEEecC-CCceEEEeeCceee
Q psy7042 167 NSVGFAHTSSRVKIG---------------------TPPRIDRMPNALYIPEGDNTKVKIFYAGD-QPMEVSLTKNGRVV 224 (2245)
Q Consensus 167 n~~g~~~~~~~l~V~---------------------~~P~~~~~~~~~~v~~G~~~~l~C~~~g~-p~~~i~W~~~g~~l 224 (2245)
| |.+.....+.+. .+|.+...+ ...+.+|+.+.|.|.+.|. |.|.|+|||||..|
T Consensus 82 N--g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~-~~~v~~g~~v~l~C~v~g~~P~p~i~W~k~g~~l 158 (207)
T 3rbs_A 82 D--GKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYL-SWEVTGECNVLLKCKVANIKKETHIVWYKDEREI 158 (207)
T ss_dssp E--TTEEEEEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEE-EEEEETTTEEEEEEEEESCCTTCEEEEEETTEEE
T ss_pred C--CCeEEEEEEEEEccchhhhcccccccccccccCCCCceEecC-CcEEcCCCcEEEEEEEeCCCCCCEEEEEECCEEC
Confidence 9 555555554321 367766555 4789999999999999998 99999999999999
Q ss_pred ecCCceEEEEeCCeEEEEEcccCccCceeEEEEEEcCCcceEEEEEEEEe
Q psy7042 225 QSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINIT 274 (2245)
Q Consensus 225 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 274 (2245)
..+.++. ...+..+|.|.++..+|+|.|+|.|.|..|..+.++.|++.
T Consensus 159 ~~~~~~~--~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~~~ 206 (207)
T 3rbs_A 159 SVDEKHD--FKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDE 206 (207)
T ss_dssp CCCCCCC--CSSEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEECCC
T ss_pred CCCCceE--cCCCEEEEEECCCCcccCEEEEEEEEcCCCEEEEEEEEecC
Confidence 8765542 23344579999999999999999999999999999988753
No 109
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.89 E-value=3e-22 Score=227.35 Aligned_cols=190 Identities=25% Similarity=0.374 Sum_probs=161.1
Q ss_pred CCCCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECCeecc-CCCeEEEEE-cCcEEEEEEeeecc-CCCeEEEEE
Q psy7042 88 GEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREIS-SGARYRVET-AGGVFRLHFNEVTD-VDNGDYTCE 164 (2245)
Q Consensus 88 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~-~~~~~~~~~-~~~~~~L~i~~~~~-~d~G~Y~C~ 164 (2245)
..+|.|...|.++.+.+|+.++|.|.+.|.|.+.|.|+|+|..+. ...++.+.. .++...|.|.+++. +|+|.|+|.
T Consensus 4 ~~pP~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~ 83 (212)
T 2yd1_A 4 AHPPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECV 83 (212)
T ss_dssp -CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEE
T ss_pred CCCCEEEcCCCceEEecCCEEEEEEEEccCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEEE
Confidence 468999999999999999999999999999999999999999997 456776654 45667899999999 999999999
Q ss_pred EEcCccc-ceeEEEEEecCC-------CeeecCCCceEEcCCCeEEEEEEEecCCCceEEEeeCceeeecCCceEEEEeC
Q psy7042 165 AYNSVGF-AHTSSRVKIGTP-------PRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLD 236 (2245)
Q Consensus 165 a~n~~g~-~~~~~~l~V~~~-------P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~ 236 (2245)
|.|..|. .+..+.|.|..+ |.+...+....+.+|+.+.|.|.+.|.|.+.|.|+++|..+.......... +
T Consensus 84 ~~n~~g~~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~-~ 162 (212)
T 2yd1_A 84 AENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRYSLK-D 162 (212)
T ss_dssp EECSSSCEEEEEEEEEEECTTCSCTTCCEEEECCCCEEEETTCCEEECCEEECSSCCEEEEEETTEECCTTSTTEEEE-T
T ss_pred EEeCCCCeEEeeEEEEEecccCCCCCCCeeEeCCCceEeecCCeEEEEEEeccCCCCeEEEEECCeEcccCCCeEEcc-C
Confidence 9999998 677888999775 778888888899999999999999999999999999999987643322222 2
Q ss_pred CeEEEEEcccCccCceeEEEEEEcCCcceEEE-EEEEEecCCCCC
Q psy7042 237 DYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGT-FTINITGLPGPP 280 (2245)
Q Consensus 237 ~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~~~p~~~ 280 (2245)
+ .|.|.++..+|+|.|+|.|.|..|..... +.|.|...+..+
T Consensus 163 ~--~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V~~~~~~~ 205 (212)
T 2yd1_A 163 G--FLQIENSREEDQGKYECVAENSMGTEHSKATNLYVKVRRVGT 205 (212)
T ss_dssp T--EEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC---C-
T ss_pred C--eEEEccCChhhCEEEEEEeecCCCceeEEEEEEEEEeccccc
Confidence 2 79999999999999999999999998764 899998765433
No 110
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.89 E-value=1.5e-22 Score=246.45 Aligned_cols=252 Identities=13% Similarity=0.107 Sum_probs=170.6
Q ss_pred EEeeecccceEEEEEEeecCCcceEEeccee-------eeeceEEECCCccCCcEEEEEEEEcCCCCCCCCCccccEEEe
Q psy7042 11 FYYCEIIVDDCYIIERREVGGAIWLKCNDYN-------VLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVKIC 83 (2245)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~-------~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~~~v~ 83 (2245)
.|.|.+.+. .....|+++|... .....|.|.+++.+|+|.|+|.|.|..+..........+.+.
T Consensus 42 ~L~C~~~~~---------~~~~~W~k~g~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s~~~~l~ 112 (316)
T 3vh8_G 42 TLRCHYRHR---------FNNFMLYKEDRIHIPIFHGRIFQESFNMSPVTTAHAGNYTCRGSHPHSPTGWSAPSNPVVIM 112 (316)
T ss_dssp EEEEEBTTB---------CCSEEEEESSCSSSCHHHHCCBSSCEEECSCCGGGCEEEEEEEBCSSSSSSBCCCCCCEEEE
T ss_pred EEEEEccCC---------CceEEEEeCCCccceeecCCcceEEEEECCCCcccCeEEEEEEEcCCCCcceecCCCcEEEE
Confidence 356777543 2556788888632 245789999999999999999998754432222223344455
Q ss_pred eccCCCCCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECCeeccCCCeEEE-EEcCcEEEEEEeeeccCCCeEEE
Q psy7042 84 EFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRV-ETAGGVFRLHFNEVTDVDNGDYT 162 (2245)
Q Consensus 84 ~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~~~~~~-~~~~~~~~L~i~~~~~~d~G~Y~ 162 (2245)
+.....+|.+...+... +.+|+.++|.|.+.+ +.+.+.|+|+|..+........ ........|.|.+++.+|+|.|+
T Consensus 113 V~~~~~~p~~~~~~~~~-v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~ 190 (316)
T 3vh8_G 113 VTGNHRKPSLLAHPGPL-VKSGERVILQCWSDI-MFEHFFLHKEGISKDPSRLVGQIHDGVSKANFSIGPMMLALAGTYR 190 (316)
T ss_dssp EECSSCCCEEEEESCSE-EETTCCEEEEEEESS-CCSEEEEEETTCCSCCEEEECEEETTEEEEEEEECSCCGGGCEEEE
T ss_pred EecCCCCCeEEecCCCc-cCCCCeEEEEEcCCC-CCcEEEEEECCCccccceeeeeecCCCceEEEEECCCChhhCceEE
Confidence 54445678888777655 899999999999954 5568999999988764322211 11223446999999999999999
Q ss_pred EEEEcCcccc-----eeEEEEEec---CCCeeecCCCceEEcCCCeEEEEEEEecCCCceEEEeeCceeeecCCceEEEE
Q psy7042 163 CEAYNSVGFA-----HTSSRVKIG---TPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTV 234 (2245)
Q Consensus 163 C~a~n~~g~~-----~~~~~l~V~---~~P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~ 234 (2245)
|.|.|..|.. +....|.|. .+|.+...+.. .+.+|+.++|.|.+. .|.+.+.|+|+|..+..........
T Consensus 191 C~a~n~~g~~~~s~~s~~~~l~V~~~~~~p~i~~~~~~-~v~~G~~v~L~C~~~-~~~~~~~W~k~g~~~~~~~~~~~~~ 268 (316)
T 3vh8_G 191 CYGSVTHTPYQLSAPSDPLDIVVTGPYEKPSLSAQPGP-KVQAGESVTLSCSSR-SSYDMYHLSREGGAHERRLPAVRKV 268 (316)
T ss_dssp EEEECTTCTTBCCCCCCCEEEEEECSSCCCEEEEESCS-CCCTTSCCEEEEEES-SCCSEEEEEETTSSCCEEEECEECT
T ss_pred EEEecCCCCccccCCCCCEEEEecCCCCCCeEEeCCCC-eecCCCcEEEEEECC-CCCcEEEEEECCCcCCCceeceecc
Confidence 9999988742 345667775 35666665543 678999999999997 4778999999998775322111111
Q ss_pred e-CCeEEEEEcccCccCceeEEEEEEcCCcc-----eEEEEEEEEecCC
Q psy7042 235 L-DDYIIIFIKEIRKEDAGDYTVNLSNSSGS-----VSGTFTINITGLP 277 (2245)
Q Consensus 235 ~-~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~-----~~~~~~l~V~~~p 277 (2245)
. .....|.|.++. |+|.|+|.|.|..+. .+..+.|.|.+.|
T Consensus 269 ~~~~~~~L~i~~v~--D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g~p 315 (316)
T 3vh8_G 269 NRTFQADFPLGPAT--HGGTYRCFGSFRHSPYEWSDPSDPLLVSVTGNP 315 (316)
T ss_dssp TSCEEEEEECC-------CEEEEEEEBTTBTTEECCCCCCEEC------
T ss_pred CCceeEEEEcCCcC--CCEEEEEEeecCCCchhccCCCCcEEEEEeCCC
Confidence 1 223589999999 999999999997663 4667778887665
No 111
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.89 E-value=5.7e-22 Score=221.75 Aligned_cols=178 Identities=15% Similarity=0.248 Sum_probs=155.4
Q ss_pred CCCceecCCcceEEeCCCeEEEEEEEe-eecCCceEEEECCeeccCCC--eEEEEEcCc-------EEEEEEeeeccCCC
Q psy7042 89 EKPDFIVPLKDLVVPLGKLLTLQCEAT-GTPVPKCRWLRNGREISSGA--RYRVETAGG-------VFRLHFNEVTDVDN 158 (2245)
Q Consensus 89 ~~P~~~~~~~~~~v~~G~~v~L~C~~~-g~p~~~i~W~~~g~~l~~~~--~~~~~~~~~-------~~~L~i~~~~~~d~ 158 (2245)
++|.|+..|.++.+.+|+.++|.|.+. |.|.+.|.|+|+|..+.... ++.+..... ...|.|.+++.+|+
T Consensus 1 e~~~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 80 (195)
T 2c5d_C 1 EESPFVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDT 80 (195)
T ss_dssp -CCSEEECCCCEEECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTC
T ss_pred CCCeeccChhheEEecCCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCC
Confidence 378999999999999999999999999 99999999999999998763 455543332 45799999999999
Q ss_pred eEEEEEEEcCccccee-EEEEEecCCCeeecCCCceEEcCCCeEEEEEEEecCCCc-eEEEeeCceeeecCCceEEEEeC
Q psy7042 159 GDYTCEAYNSVGFAHT-SSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPM-EVSLTKNGRVVQSDDRFKFTVLD 236 (2245)
Q Consensus 159 G~Y~C~a~n~~g~~~~-~~~l~V~~~P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~-~i~W~~~g~~l~~~~~~~~~~~~ 236 (2245)
|.|+|.|.|..|...+ .+.|.|..+|.+...|....+.+|+.+.|.|.+.|.|.| .|.|+|+|..+...... .
T Consensus 81 G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~-----~ 155 (195)
T 2c5d_C 81 GQYQCLVFLGHQTFVSQPGYVGLEGLPYFLEEPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPGH-----G 155 (195)
T ss_dssp EEEEEEEEETTEEEECCCEEEEECCSCEEEECCCCEEECTTCCEEEEEEEECSSCCCEEEEEESSCBSSSSTTS-----S
T ss_pred cEEEEEEEeCCCceecccEEEEEecCCeEEcCCCcEEEcCCCEEEEEeECCCCCCCCEEEEEECCEeccCCCCc-----C
Confidence 9999999998876655 488999999999999999999999999999999999999 99999999998765543 3
Q ss_pred CeEEEEEcccCccCceeEEEEEEcCCcceE-EEEEEEE
Q psy7042 237 DYIIIFIKEIRKEDAGDYTVNLSNSSGSVS-GTFTINI 273 (2245)
Q Consensus 237 ~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~-~~~~l~V 273 (2245)
....|.|.++. |+|.|+|.|.|..|... ..+.|.|
T Consensus 156 ~~~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 156 PQRSLHVPGLN--KTSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp CCEEEEECCCS--SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred CCCeEEEcccc--cCceEEEEEEcCCCceEEEEEEEEE
Confidence 45689999987 89999999999999885 7999998
No 112
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=99.89 E-value=2.6e-22 Score=242.78 Aligned_cols=278 Identities=14% Similarity=0.103 Sum_probs=205.2
Q ss_pred eEeeCCCeEEEEEeeeec-----CCCeEEEEeCCeEeeccCeEEEEecCC-eEEEEEcCCCCCcCEEEEEEEEeCCCCce
Q psy7042 586 AYFDKGENVVVKIPFTGY-----PKPKITWYRDNEVIESGGHFHVETSER-HAILTIRDASNVDTAPYRVVAENDLGMDS 659 (2245)
Q Consensus 586 ~~~~~g~~~~l~C~~~g~-----p~~~i~W~~~~~~~~~~~~~~~~~~~~-~~~l~i~~~~~~d~g~y~C~a~n~~g~~~ 659 (2245)
..+..|++++|.|.+.+. |.+.|.|+++|..+..+ ++.....+. .+.|.|.++...|.|.|.|.|.+..+...
T Consensus 10 ~~v~~G~~v~l~C~~~~~~~~~~~~~~i~W~~~g~~l~~~-~~~~~~~~~~~~~L~i~~~~~~d~g~y~c~~~~~~~~~~ 88 (313)
T 2d9q_B 10 PIVHLGDPITASCIIKQNCSHLDPEPQILWRLGAELQPGG-RQQRLSDGTQESIITLPHLNHTQAFLSCSLNWGNSLQIL 88 (313)
T ss_dssp SEECTTCCEEEEECCCTTSCSSCSCSCCEEESSSCBCTTC-EECCCSSSCCCEEEEESCCCSSEEEEEEEEESSSSEEEE
T ss_pred cEEcCCCCEEEEEEECCCCCCCCcccceEEEeCCEECCcc-ceEEEecCeEEEEEEEeccCCCccceEEeeecCCCceeE
Confidence 457789999999999987 67899999999987543 322222222 27899999999999999999976555556
Q ss_pred eEEEEEeeCCCCCCCCCeeeeec-CCcEEEEeeCCCCCCCcccccEEEEeeeCCC------CCeEEEce-eeeeeEEE--
Q psy7042 660 AIVKIQISDRPDPPQFPTVEDIG-HDSLALVWRAPIWDGGSNITNYIVEKREHPM------SSWIRVGN-TRFTTMAI-- 729 (2245)
Q Consensus 660 ~~~~l~v~~~P~~p~~~~~~~~~-~~si~lsW~~p~~~~~~~~~~y~v~~~~~~~------~~w~~~~~-~~~~~~~i-- 729 (2245)
..+.|.+..+|.+|.++.+...+ .++++++|.++. +++. ...|.|+|+.... ..|..+.. .....+.+
T Consensus 89 ~~~~l~v~~~P~~P~~l~c~~~~~~~~~~~~W~~~~-~~~~-~~~Y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (313)
T 2d9q_B 89 DQVELRAGYPPAIPHNLSCLMNLTTSSLICQWEPGP-ETHL-PTSFTLKSFKSRGNCQTQGDSILDCVPKDGQSHCSIPR 166 (313)
T ss_dssp EEEEEEECCCCCCCEEEEEEEETTTTEEEEEEECCS-CCSS-CCEEEEEEEECCTTSCSCCCCEEEECCCTTCSEEEEEG
T ss_pred EEEEEccCCCCCCCccceeeECCCCccEEEEecCCC-CCCC-ceeEEEEEEecCCCcccCCcccccCCCCCCCcEEEECc
Confidence 67888899999999999988874 689999999664 4443 4679999986532 34554431 11234455
Q ss_pred ecCCCCCEEEEEEEEEecccCCCCCCCCccEEecCccccccccccccccCCCceeecccccccccCCceEEEEeeeccCc
Q psy7042 730 TGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDTFKKQIKKRQYDFDETGKKIRGKADEKVSDYDQYVFDIYSKYVPQ 809 (2245)
Q Consensus 730 ~~L~p~t~y~~~v~a~n~~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 809 (2245)
.+|.+++.|.|+|.|.|..|.+..+. ..+ .+.
T Consensus 167 ~~L~~~~~Y~f~V~A~N~~G~~~s~~-~~~-~~~---------------------------------------------- 198 (313)
T 2d9q_B 167 KHLLLYQNMGIWVQAENALGTSMSPQ-LCL-DPM---------------------------------------------- 198 (313)
T ss_dssp GGCCSSSCEEEEEEEEETTEEEECCC-EEE-CGG----------------------------------------------
T ss_pred cccccceeEEEEEEEECCCCCccCcc-EEE-ehh----------------------------------------------
Confidence 45999999999999999999742211 000 000
Q ss_pred cccccccceecccccccccccCceeEEEEeeecccCCeeEEEeeccCCchhhhhhheeeeeeeccCCCceEeecccccCC
Q psy7042 810 PVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLHDAFEDD 889 (2245)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 889 (2245)
T Consensus 199 -------------------------------------------------------------------------------- 198 (313)
T 2d9q_B 199 -------------------------------------------------------------------------------- 198 (313)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cceEEEEEEecCCCCCcccEEeee------eCceEEEEecCCCCCCCCccceEEEeee-ecCCCceEEecce-eeeceEE
Q psy7042 890 DEMVLIFEVLDRPHPPENLHADEF------AGDSLTLYWTPPRDNGGSEITNYVVEKK-DYNSTVWTKVSSY-VTTPFVR 961 (2245)
Q Consensus 890 ~~~~~~~~~~~~P~~p~~l~~~~~------~~~~~~l~W~~p~~~~g~~i~~y~i~~~-~~~~~~~~~~~~~-~~~~~~~ 961 (2245)
...+|.||.++.+... ..+++.|+|++|... |..+.+|+|+|+ ..+...|..+... .....+.
T Consensus 199 --------~~~~p~pP~~~~~~~~~~~~~~~~~~l~l~W~~p~~~-~~~~l~Y~v~y~~~~~~~~w~~~~~~~~~~~~~~ 269 (313)
T 2d9q_B 199 --------DVVKLEPPMLRTMDPSPEAAPPQAGCLQLSWEPWQPG-LHINQKCELRHKPQRGEASWALVGPLPLEALQYE 269 (313)
T ss_dssp --------GGEECCCCEEEECCC-------CCSCEEEEEECCGGG-TTSCEEEEEEEEESSSCCCCEEEEEECSCEEEEE
T ss_pred --------heeccCcCceeEEEEecccccCCCCeEEEEECCCCCC-CceeEEEEEEEccCCCCCCcEEcccccCcceEEE
Confidence 0025788988888765 468999999998653 334679999999 6667788866432 3456899
Q ss_pred EecCCCCceeeEEEEEEeccccCCCccccCcccccCCCCCCC
Q psy7042 962 VRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPG 1003 (2245)
Q Consensus 962 i~~L~p~~~y~~~v~a~n~~g~~~~s~~~~~~~~~t~~~~p~ 1003 (2245)
|.+|.|++.|.|+|+|.|..|.|.+|..+..+.+.|++.+|.
T Consensus 270 l~~L~p~t~Y~~rVra~~~~g~G~wS~wS~~~~~~T~~~~P~ 311 (313)
T 2d9q_B 270 LCGLLPATAYTLQIRCIRWPLPGHWSDWSPSLELRTTERAAA 311 (313)
T ss_dssp ECSCCSCCCEEEEEEEEECSSCCCCCCCCCCEEECCCC----
T ss_pred EeCCCCCCeEEEEEEeeECCCCCccCCCCCccceeCCccCCC
Confidence 999999999999999999999999988888888888887764
No 113
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.89 E-value=8.3e-22 Score=219.19 Aligned_cols=179 Identities=22% Similarity=0.340 Sum_probs=155.9
Q ss_pred CCCceecCCcceEEeC-CCeEEEEEEEeeecC--CceEEEECCeeccCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEE
Q psy7042 89 EKPDFIVPLKDLVVPL-GKLLTLQCEATGTPV--PKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEA 165 (2245)
Q Consensus 89 ~~P~~~~~~~~~~v~~-G~~v~L~C~~~g~p~--~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a 165 (2245)
.+|.|..++. ..+.+ |+.++|.|.+.+.|. +.+.|+|+|..+.....+. ....|.|.+++.+|+|.|+|.|
T Consensus 2 ~~P~i~~~~~-~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~-----~~~~L~i~~~~~~d~G~Y~C~~ 75 (190)
T 2wv3_A 2 NEPRIVTSEE-VIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNA-----SNMEYRINKPRAEDSGEYHCVY 75 (190)
T ss_dssp -CCEEEECCC-EECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCCBCC-----SEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCcccccce-EEEccCCceEEEEEEeccCCCCceEEEEEECCEECcccceEe-----ccEEEEEecCCcccCEEEEEEE
Confidence 3688877544 55556 999999999999887 7899999999988654332 3357999999999999999999
Q ss_pred EcCcccceeEEEEEecCCCeeecCCCceEEcCCCeEEEEEEEecCCCceEEEee--Cceeee---cCCceEEEEeCCeEE
Q psy7042 166 YNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTK--NGRVVQ---SDDRFKFTVLDDYII 240 (2245)
Q Consensus 166 ~n~~g~~~~~~~l~V~~~P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~i~W~~--~g~~l~---~~~~~~~~~~~~~~~ 240 (2245)
.|. |....++.|.|..+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|+| +|..+. ...++.+...+...+
T Consensus 76 ~n~-~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 154 (190)
T 2wv3_A 76 HFV-SAPKANATIEVKAAPDITGHKRSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFIINKENYTE 154 (190)
T ss_dssp EET-TEEEEEEEEEEECCCEEEEECSEEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEECCCTTSCEEEEECSSEEE
T ss_pred EeC-CcccccEEEEEecCCcccccCCcceeeCCCcEEEEEEeCccCCCceEEEEcCCCceeeeecCCCeEEEecCCCeeE
Confidence 999 88888999999999999988888999999999999999999999999999 888775 456677777777779
Q ss_pred EEEcccC-ccCceeEEEEEEcCCcceEEEEEEEEe
Q psy7042 241 IFIKEIR-KEDAGDYTVNLSNSSGSVSGTFTINIT 274 (2245)
Q Consensus 241 L~i~~~~-~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 274 (2245)
|.|.++. .+|+|.|+|.|.|..|....++.|.|.
T Consensus 155 L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 155 LNIVNLQITEDPGEYECNATNSIGSASVSTVLRVR 189 (190)
T ss_dssp EEECSCCTTTSCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred EEEEeccccCCCEEEEEEEEecCCcceeEEEEEEE
Confidence 9999999 799999999999999999999999885
No 114
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.88 E-value=2.2e-22 Score=224.80 Aligned_cols=185 Identities=26% Similarity=0.417 Sum_probs=161.4
Q ss_pred CCCCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECCeeccC-CCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEE
Q psy7042 88 GEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISS-GARYRVETAGGVFRLHFNEVTDVDNGDYTCEAY 166 (2245)
Q Consensus 88 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~-~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 166 (2245)
..+|.|+.++..+.+.+|+.++|.|.+.|.|.+.|.|+|+|..+.. ..++.+...+. .|.|.+++.+|+|.|+|.|.
T Consensus 5 ~~~P~i~~~~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~~~ 82 (192)
T 2iep_A 5 PKAPVITTPLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIRENGQ--LLTILSVEDSDDGIYCCTAN 82 (192)
T ss_dssp CEEEEESSCCCEEEEETTSCEEEECCEEEESCCEEEEEETTEECCTTCTTEEEEGGGT--EEEESSCCGGGCEEEEEEEE
T ss_pred CCCceeecCccceeeeCCCcEEEEeeCCCCCCCeEEEEECCEEccccCccEEEcCCcc--EEEEcCCCcccCeEEEEEEE
Confidence 3578999999999999999999999999999999999999999875 45777766655 59999999999999999999
Q ss_pred cCcccc-eeEEEEEecCCCeeecCCCceEEcCCCeEEEEEEEecCCCceEEEeeCceeeecCCceEEEEeCCeEEEEEcc
Q psy7042 167 NSVGFA-HTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKE 245 (2245)
Q Consensus 167 n~~g~~-~~~~~l~V~~~P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~ 245 (2245)
|..|.. ...+.|.|..+|.+...+....+.+|+.+.|.|.+.|.|.+.+.|+|+|..+....++.+...+ .|.|.+
T Consensus 83 ~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~---~L~i~~ 159 (192)
T 2iep_A 83 NGVGGAVESCGALQVKMKPKITRPPINVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALRENSRIAVLESG---SLRIHN 159 (192)
T ss_dssp CSSSCCEEEEEEEEEEEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCCSSEEECTTS---CEEESS
T ss_pred cCCCceeEeEEEEEEEeCCccccCCcceEEeCCCcEEEEEEEeccCCceEEEEeCCEEccCCCcEEEecCC---cEEEec
Confidence 998874 5577899999999998888999999999999999999999999999999999877765543332 699999
Q ss_pred cCccCceeEEEEEEcCCcce-EEEEEEEEecCC
Q psy7042 246 IRKEDAGDYTVNLSNSSGSV-SGTFTINITGLP 277 (2245)
Q Consensus 246 ~~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~p 277 (2245)
+..+|+|.|+|.|.|..|.. +..+.|.|..+|
T Consensus 160 ~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~pp 192 (192)
T 2iep_A 160 VQKEDAGQYRCVAKNSLGTAYSKLVKLEVEVFA 192 (192)
T ss_dssp CCGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred CChhhCEEEEEEEEcCCCcEEEEEEEEEEEeCC
Confidence 99999999999999999987 557899988764
No 115
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.88 E-value=6.6e-23 Score=226.61 Aligned_cols=169 Identities=12% Similarity=0.080 Sum_probs=138.7
Q ss_pred ceEEeCCCeEEEEEE---EeeecCCceEEEECCeecc-----------------CCCeEEEEEcCcEEEEEEeeeccCCC
Q psy7042 99 DLVVPLGKLLTLQCE---ATGTPVPKCRWLRNGREIS-----------------SGARYRVETAGGVFRLHFNEVTDVDN 158 (2245)
Q Consensus 99 ~~~v~~G~~v~L~C~---~~g~p~~~i~W~~~g~~l~-----------------~~~~~~~~~~~~~~~L~i~~~~~~d~ 158 (2245)
++++..|+.++|.|. +.+.|.+.|.|+|+|..+. ...++.+...++...|.|.+++.+|+
T Consensus 2 ~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 81 (203)
T 4fa8_A 2 AVTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHD 81 (203)
T ss_dssp CCEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGC
T ss_pred CeEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHC
Confidence 468899999999995 5678999999999874332 12345666667788999999999999
Q ss_pred eEEEEEEEcCcccceeEEEEEecCCCeeecCCCceEEcCCCeEEEEEEEecCCCceEEEeeCceeee----cCCceEEEE
Q psy7042 159 GDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQ----SDDRFKFTV 234 (2245)
Q Consensus 159 G~Y~C~a~n~~g~~~~~~~l~V~~~P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~i~W~~~g~~l~----~~~~~~~~~ 234 (2245)
|.|+|.|.|..|..+..+.|.|..||.+...+....+.+|+.++|.|.+.|.|.|.|+|++++..+. ...++.+..
T Consensus 82 G~Y~C~a~n~~g~~~~~~~l~V~~p~~~~~~~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~~~~~~~r~~~~~ 161 (203)
T 4fa8_A 82 GNYLCRMKLGETEVTKQEHLSVVKPLTLSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPTAANGGVMKEK 161 (203)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEEEEEEEEEEEECCSSCSCCEEEEEEEEEESCCEEEECCC------------CCEECT
T ss_pred eEEEEEEEcCCCcEEEEEEEEecCCceeeecceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCeeecCcccccceEEEeC
Confidence 9999999999999999999999999999988888999999999999999999999999998765443 234455555
Q ss_pred eCCeEEEEEcccCccCceeEEEEEEcCCcceEE
Q psy7042 235 LDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSG 267 (2245)
Q Consensus 235 ~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~ 267 (2245)
.+....|.|.++..+|+|.|+|.|.|.+|+...
T Consensus 162 ~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~ 194 (203)
T 4fa8_A 162 DGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAHG 194 (203)
T ss_dssp TSCEEEEEEEEECSSCCCCEEEEEESSSCEEEE
T ss_pred CCCEEEEEECCCCHHHCEEEEEEEEcCCCEEEE
Confidence 555567788899999999999999999998764
No 116
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.88 E-value=2.2e-20 Score=242.11 Aligned_cols=220 Identities=10% Similarity=0.041 Sum_probs=136.7
Q ss_pred eceEEECCCccCCcEEEEEEEEcCCCC--------CCCCCccccEEEeecc-CCCCCceec-CCcceEEeCCCeEEEEEE
Q psy7042 44 ECSFSVLNLVEGNDYEFRIIAVNAIGK--------SEPSICTTPVKICEFV-GGEKPDFIV-PLKDLVVPLGKLLTLQCE 113 (2245)
Q Consensus 44 ~~~l~i~~~~~~d~G~Y~C~a~n~~g~--------~~~~~~~~~~~v~~~~-~~~~P~~~~-~~~~~~v~~G~~v~L~C~ 113 (2245)
..+|.|.+++.+|+|.|.|.+.+..|. .........+.+.+.. ...+|.+.. .+.......|+.++|.|.
T Consensus 79 ~~sL~I~~v~~~Dsg~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~~~~~v~L~C~ 158 (512)
T 1zvo_C 79 QFSLNLRSMSAADTAMYYCARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPTKAPDVFPIISGCRHPKDNSPVVLACL 158 (512)
T ss_pred EEEEEECcCCHHHCEEEEEEEECCCCccccccccccccccccCceEEEecccCCcCCeEEeccCCcccccCCCeEEEEEE
Confidence 579999999999999999999876430 0000011112233221 124566542 222221235799999999
Q ss_pred Eeee-cCC-ceEEEECCeeccCC-CeEEEEEcCc---EEEEEEeeeccCCCeEEEEEEEcCcccceeEE-----------
Q psy7042 114 ATGT-PVP-KCRWLRNGREISSG-ARYRVETAGG---VFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSS----------- 176 (2245)
Q Consensus 114 ~~g~-p~~-~i~W~~~g~~l~~~-~~~~~~~~~~---~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~----------- 176 (2245)
+.|. |.| +|.|++++...... .......++. ...|.|.....+ .|.|+|.|.|..+......
T Consensus 159 ~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~-~g~ytC~v~n~~~~~~~~~~~~~~~~~~~~ 237 (512)
T 1zvo_C 159 ITGYHPTSVTVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWR-QGEYKCVVQHTASKSKKEIFRWPESPKAQA 237 (512)
T ss_pred EEeeecCceEEEEEcCcccCceEecCceecCCCCEEEEEEEEEcHHHcC-CceEEEEEEeCCCCceEEEecCCCCCCcCC
Confidence 9886 765 89999976432100 0001111121 135888888777 9999999999988765544
Q ss_pred EEEecCC----------------------------------------------------Ceee-cCCCceEEcCCCeEEE
Q psy7042 177 RVKIGTP----------------------------------------------------PRID-RMPNALYIPEGDNTKV 203 (2245)
Q Consensus 177 ~l~V~~~----------------------------------------------------P~~~-~~~~~~~v~~G~~~~l 203 (2245)
.|.|..+ |.+. ..|....+.+|+.++|
T Consensus 238 ~v~l~~pp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~g~~~~L 317 (512)
T 1zvo_C 238 SSVPTAQPQAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPAVQDLWLRDKATF 317 (512)
T ss_pred EEEEeCCCchhccccccccCchhhccCcccccceeccCCcccccccCcccccCCCCCCCCEEEEECCChHHhccCCceEE
Confidence 3444433 3332 2334445668999999
Q ss_pred EEEEecCCC--ceEEEeeCceeeecCCceE-EEE-eCC----eEEEEEcccCccCceeEEEEEEcCCcc
Q psy7042 204 KIFYAGDQP--MEVSLTKNGRVVQSDDRFK-FTV-LDD----YIIIFIKEIRKEDAGDYTVNLSNSSGS 264 (2245)
Q Consensus 204 ~C~~~g~p~--~~i~W~~~g~~l~~~~~~~-~~~-~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~ 264 (2245)
.|.+.|.++ ..|+|+|+|..+....... ... .++ .+.|.|..+..+|.|.|+|.|.|..+.
T Consensus 318 ~C~v~g~~P~~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~~~~ 386 (512)
T 1zvo_C 318 TCFVVGSDLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHPSLP 386 (512)
T ss_pred EEEEeceECCCeEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEeCCCC
Confidence 999998633 4999999999865221100 111 111 246888888888999999999987653
No 117
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.87 E-value=2.4e-21 Score=215.56 Aligned_cols=178 Identities=21% Similarity=0.285 Sum_probs=152.7
Q ss_pred ceecCCcceEEeCCCeEEEEEEEeeecCCceEEEE-CCeeccCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEEcCcc
Q psy7042 92 DFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLR-NGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVG 170 (2245)
Q Consensus 92 ~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~-~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g 170 (2245)
.|+.+|.++.+.+|+.++|.|.+.|.|. .+.|+| +|..+....++.+...++...|.|.+++.+|+|.|+|.|.|..|
T Consensus 4 ~~~~~~~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g 82 (189)
T 2v44_A 4 QVTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKG 82 (189)
T ss_dssp EEEESCSEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTS
T ss_pred EEEecCCceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCCC
Confidence 4667788899999999999999999887 899999 88888888899998888888999999999999999999999988
Q ss_pred cc-eeEEEEEecCCCeeecCCCceEEcCCCeEEEEEEEecCCCceEEEeeCceeeec--CCceEEEEeCCeEEEEEcccC
Q psy7042 171 FA-HTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQS--DDRFKFTVLDDYIIIFIKEIR 247 (2245)
Q Consensus 171 ~~-~~~~~l~V~~~P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~i~W~~~g~~l~~--~~~~~~~~~~~~~~L~i~~~~ 247 (2245)
.. +..+.|.|..+|.+...+....+.+|+.+.|.|.+.|.|.|.++|+|+|..+.. ..++.+... ..|.|.++.
T Consensus 83 ~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~---~~L~i~~v~ 159 (189)
T 2v44_A 83 QTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLAN---NNLQILNIN 159 (189)
T ss_dssp CEEEEEEEEEEECCCEEESCCCSEEEETTSCEEECCEEECSSCCEEEEEEEC--CEECCCTTEEECTT---SCEEETTCC
T ss_pred CcEEEEEEEEEecCCceeecCCcEEEeCCCCEEEEEEECcCCCCcEEEEECCcEEeccCCCCEEEecC---CcEEEEEcC
Confidence 76 567889999999998888889999999999999999999999999999998864 334433322 269999999
Q ss_pred ccCceeEEEEEEcCCcceEEEEEEEE
Q psy7042 248 KEDAGDYTVNLSNSSGSVSGTFTINI 273 (2245)
Q Consensus 248 ~~d~G~Y~C~a~n~~g~~~~~~~l~V 273 (2245)
.+|+|.|+|.|.|..|.......+.|
T Consensus 160 ~~d~G~Y~C~a~n~~~~~~~~~~~~v 185 (189)
T 2v44_A 160 KSDEGIYRCEGRVEARGEIDFRDIIV 185 (189)
T ss_dssp GGGCEEEEEEEEETTTTEEEEEEEEE
T ss_pred cccCeEEEEEEEccccCceeeeeEEE
Confidence 99999999999999977665555444
No 118
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.87 E-value=2.9e-21 Score=213.29 Aligned_cols=176 Identities=14% Similarity=0.245 Sum_probs=149.3
Q ss_pred CCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECCeeccCCCeEEEEEcCc--EEEEEEeeeccCCCeEEEEEEEc
Q psy7042 90 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGG--VFRLHFNEVTDVDNGDYTCEAYN 167 (2245)
Q Consensus 90 ~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~--~~~L~i~~~~~~d~G~Y~C~a~n 167 (2245)
+|.|...|.++.+.+|+.++|.|.+.|.|.+.+.|+|+|..+....++.+...+. ...|.|.+++.+|+|.|+|.|.|
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~ 81 (182)
T 1rhf_A 2 GLKLMGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVED 81 (182)
T ss_dssp -----CCCEEEEEETTCCEEEEEEEESCSSCCEEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESS
T ss_pred CCEEEeCCcceEEeCCCcEEEEEEEeCCCCCeEEEEECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEEc
Confidence 5788889999999999999999999999999999999999998877766655443 35799999999999999999999
Q ss_pred Cccc-ceeEEEEEecCCCeeecCCCceEEcCCCeEEEEEEEecCCCc-eEEEeeCceeeecCCceEEEEeCCeEEEEEcc
Q psy7042 168 SVGF-AHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPM-EVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKE 245 (2245)
Q Consensus 168 ~~g~-~~~~~~l~V~~~P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~-~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~ 245 (2245)
..|. .+..+.|.|..+|.+...+....+.+|+.+.|.|.+.|.|.| .+.|+++|..+..... ....|.|.+
T Consensus 82 ~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~-------~~~~L~i~~ 154 (182)
T 1rhf_A 82 GGETEISQPVWLTVEGVPFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPAP-------SPSVLNVTG 154 (182)
T ss_dssp CTTCEECCCEEEEEECSCEEEECCCCEEECTTCCEEEEEEEECSSSCCEEEEEETTEECSCSEE-------SSEEEEECC
T ss_pred CCCcEEEEEEEEEEecCCeEEecCcceEecCCCEEEEEeEecCCCCCCEEEEEcCCeECCCCCC-------CceEEEEec
Confidence 8775 445889999999999999999999999999999999999999 9999999998854322 445899999
Q ss_pred cCccCceeEEEEEEcCCcceE-EEEEEEEe
Q psy7042 246 IRKEDAGDYTVNLSNSSGSVS-GTFTINIT 274 (2245)
Q Consensus 246 ~~~~d~G~Y~C~a~n~~g~~~-~~~~l~V~ 274 (2245)
+ +|+|.|+|.|.|..|... .++.|.|.
T Consensus 155 ~--~d~G~Y~C~a~N~~g~~~s~~~~l~Vk 182 (182)
T 1rhf_A 155 V--TQSTMFSCEAHNLKGLASSRTATVHLQ 182 (182)
T ss_dssp C--SSCEEEEEEEEETTEEEECCCEEEEEC
T ss_pred c--ccCeEEEEEEECCCCCcccceEEEEeC
Confidence 8 599999999999999875 48888763
No 119
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=99.87 E-value=9e-21 Score=227.24 Aligned_cols=264 Identities=19% Similarity=0.277 Sum_probs=202.4
Q ss_pred eCCCCCCCCCeeeeecCCcEEEEeeCCCCCCCcccccEEEEeeeCC-CCCeEEEc-eeeeeeEEEecCCCCCEEEEEEEE
Q psy7042 667 SDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHP-MSSWIRVG-NTRFTTMAITGLSPGHQYEFRVYA 744 (2245)
Q Consensus 667 ~~~P~~p~~~~~~~~~~~si~lsW~~p~~~~~~~~~~y~v~~~~~~-~~~w~~~~-~~~~~~~~i~~L~p~t~y~~~v~a 744 (2245)
..+|.+|.++.+..++.+++.|+|.+| ++.+.+|.|+|+... ...|.... ......+.+.+|.|++.|.|+|.|
T Consensus 18 ~~~p~~P~~l~~~~~~~~sv~l~W~~p----~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a 93 (290)
T 3r8q_A 18 GPAIPAPTDLKFTQVTPTSLSAQWTPP----NVQLTGYRVRVTPKEKTGPMKEINLAPDSSSVVVSGLMVATKYEVSVYA 93 (290)
T ss_dssp --CCCCCEEEEEEEECSSCEEEEEECC----SSCCCEEEEEEEESSSSSCCEEEEECTTCCEEEECSCCSSCEEEEEEEE
T ss_pred CCCCCCCCceEEEECCCCEEEEEEeCC----CCCeeEEEEEEEeCCCCCceEEEEcCCCccEEEeCCCCCCCEEEEEEEE
Confidence 346788999999999999999999976 247889999998865 34565443 234578999999999999999999
Q ss_pred EecccCCCCCCCCccEEecCccccccccccccccCCCceeecccccccccCCceEEEEeeeccCccccccccceeccccc
Q psy7042 745 ENVYGRSDPSTTSDLITTKDTFKKQIKKRQYDFDETGKKIRGKADEKVSDYDQYVFDIYSKYVPQPVDIKTSSVYDHYDI 824 (2245)
Q Consensus 745 ~n~~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 824 (2245)
.|..|.+.++. ..+
T Consensus 94 ~~~~g~s~~s~--~~~---------------------------------------------------------------- 107 (290)
T 3r8q_A 94 LKDTLTSRPAQ--GVV---------------------------------------------------------------- 107 (290)
T ss_dssp EETTEECCCEE--EEE----------------------------------------------------------------
T ss_pred EeCCCCCCCcc--eeE----------------------------------------------------------------
Confidence 99988765442 000
Q ss_pred ccccccCceeEEEEeeecccCCeeEEEeeccCCchhhhhhheeeeeeeccCCCceEeecccccCCcceEEEEEEecCCCC
Q psy7042 825 LEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFEVLDRPHP 904 (2245)
Q Consensus 825 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ 904 (2245)
.....|.+
T Consensus 108 ------------------------------------------------------------------------~t~~~~~~ 115 (290)
T 3r8q_A 108 ------------------------------------------------------------------------TTLENVSP 115 (290)
T ss_dssp ------------------------------------------------------------------------ECCCCCCC
T ss_pred ------------------------------------------------------------------------ecCCCCCC
Confidence 00123578
Q ss_pred CcccEEeeeeCceEEEEecCCCCCCCCccceEEEeeeecCCCceEEecceeeeceEEEecCCCCceeeEEEEEEeccccC
Q psy7042 905 PENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFVRVRNLAIGSTYEFRVMAENQYGLS 984 (2245)
Q Consensus 905 p~~l~~~~~~~~~~~l~W~~p~~~~g~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~~ 984 (2245)
|.++.+...+.+++.|+|.+|. +.+.+|.|++...+...+...........+.|.+|.|++.|.|+|.|.|..|.+
T Consensus 116 P~~l~~~~~~~~sv~l~W~~p~----~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~s 191 (290)
T 3r8q_A 116 PRRARVTDATETTITISWRTKT----ETITGFQVDAVPANGQTPIQRTIKPDVRSYTITGLQPGTDYKIYLYTLNDNARS 191 (290)
T ss_dssp CEEEEEEEECSSCEEEEEECCS----CCCCEEEEEEEESSSCCCEEEEECTTCSEEEECSCCTTCEEEEEEEEEETTEEC
T ss_pred CceeEEEEcCCCeEEEEEeCCC----CcccEEEEEEEECCCCcceEEecCCCccEEEECCCCCCCEEEEEEEEEeCCccc
Confidence 8999999999999999999973 278999999998766655555555577889999999999999999999999987
Q ss_pred CCccccCcccccCCCCCCCCCCCCeeEeecCCeEEEEecCCCCCCCCccceEEEEEEecCCccceeccccccCCcceeEE
Q psy7042 985 KPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYV 1064 (2245)
Q Consensus 985 ~~s~~~~~~~~~t~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 1064 (2245)
.+. .+...+ .|.+|.++.+...+.+++.|+|.+|. +++.+|.|+|+..+...+..... ......
T Consensus 192 ~~~----~~~~~t---~p~~P~~l~~~~~~~~sv~l~W~~p~----~~~~~Y~v~~~~~~~~~~~~~~~--~~~~~~--- 255 (290)
T 3r8q_A 192 SPV----VIDAST---AIDAPSNLRFLATTPNSLLVSWQPPR----ARITGYIIKYEKPGSPPREVVPR--PRPGVT--- 255 (290)
T ss_dssp CCE----EEEEEC---CCCCCEEEEEEEEETTEEEEEEECCS----SCCCEEEEEEECTTSCCEECSSC--CCTTCC---
T ss_pred CCE----EEEecC---CCCCCCccEEEeeCCCEEEEEEeCCC----CcccEEEEEEEeCCCCcceeEec--cCCCcc---
Confidence 654 222332 37788899999999999999999987 25899999999776554432111 111111
Q ss_pred EEeecccccCCccCchhhhhhhhhcccccccccccCCcEEEEEEEEEecCCCCCC
Q psy7042 1065 LWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPW 1119 (2245)
Q Consensus 1065 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~v~A~n~~G~~~~ 1119 (2245)
.++|.+|.+++.|.|+|+|.|..|.|.+
T Consensus 256 ---------------------------~~~i~~L~p~t~Y~~~V~A~~~~g~s~p 283 (290)
T 3r8q_A 256 ---------------------------EATITGLEPGTEYTIYVIALKNNQKSEP 283 (290)
T ss_dssp ---------------------------EEEECSCCTTCEEEEEEEEEETTEECCC
T ss_pred ---------------------------EEEECCCCCCCEEEEEEEEEeCCCcCCc
Confidence 1269999999999999999999998753
No 120
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.87 E-value=2.5e-21 Score=238.33 Aligned_cols=168 Identities=11% Similarity=0.209 Sum_probs=124.9
Q ss_pred CCcceEEeCCCeEEEEEEEeee--cCCceEEEEC--Ceecc-----------------CCCeEEEEEc--CcEEEEEEee
Q psy7042 96 PLKDLVVPLGKLLTLQCEATGT--PVPKCRWLRN--GREIS-----------------SGARYRVETA--GGVFRLHFNE 152 (2245)
Q Consensus 96 ~~~~~~v~~G~~v~L~C~~~g~--p~~~i~W~~~--g~~l~-----------------~~~~~~~~~~--~~~~~L~i~~ 152 (2245)
.|..+.+.+|+.++|.|.+.+. |.+.|.|+|+ |..+. ...|+.+..+ ++..+|.|.+
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (344)
T 1za6_B 6 QSGAEVVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELSS 85 (344)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEECS
T ss_pred CCCCeEEeCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEECC
Confidence 3455789999999999999886 3678999996 43221 2357777654 4567899999
Q ss_pred eccCCCeEEEEEEEcCcccceeEEEEEecC----CCeeecCCCceEEcCCCeEEEEEEEecC-CC-ceEEEeeCceeee-
Q psy7042 153 VTDVDNGDYTCEAYNSVGFAHTSSRVKIGT----PPRIDRMPNALYIPEGDNTKVKIFYAGD-QP-MEVSLTKNGRVVQ- 225 (2245)
Q Consensus 153 ~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~----~P~~~~~~~~~~v~~G~~~~l~C~~~g~-p~-~~i~W~~~g~~l~- 225 (2245)
++.+|+|.|+|.|.|..+.....+.|.|.. +|.+...+....+.+|+.++|.|.+.|. |. +.|+|+|+|..+.
T Consensus 86 v~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~ 165 (344)
T 1za6_B 86 LRSEDTAVYFCTRSLNMAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGV 165 (344)
T ss_dssp CCGGGCEEEEEEETTTTCEECCCEEEEECSSCCBCCEEEEECCSCTTTSSSEEEEEEEEEEEBSSCCCEEETTTTBCTTE
T ss_pred CCcccCEEEEEEEecCcceecCcEEEEEecCCCCCCeEEEccccccccCCCcEEEEEEEeeEECCCeEEEEecCCccCce
Confidence 999999999999999665555567888873 5565544444456899999999999986 64 7999999997642
Q ss_pred --------cCCceEEEEeCCeEEEEEcccCccCceeEEEEEEcCCcceEEEE
Q psy7042 226 --------SDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTF 269 (2245)
Q Consensus 226 --------~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 269 (2245)
.+..+.. ...|.|.++..+| |.|+|.|.|..+......
T Consensus 166 ~~~~~~~~~~~~~~~-----~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~ 211 (344)
T 1za6_B 166 HTFPAVLQSSGLYSL-----SSVVTVPSSSLGT-QTYICNVNHKPSNTKVDK 211 (344)
T ss_dssp EECCCEECTTSCEEE-----EEEEEEETTHHHH-BCEEEEEEEGGGTEEEEE
T ss_pred eECCCeECCCCCEEE-----EEEEEEcHHHcCC-CcEEEEEEeCCCCccceE
Confidence 1112211 2369999998888 999999999887654333
No 121
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.87 E-value=3.5e-21 Score=219.23 Aligned_cols=174 Identities=22% Similarity=0.301 Sum_probs=154.6
Q ss_pred eCCCeEEEEEEEeee-cCCceEEEECCeeccCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEEcCcccceeEEEEEec
Q psy7042 103 PLGKLLTLQCEATGT-PVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIG 181 (2245)
Q Consensus 103 ~~G~~v~L~C~~~g~-p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 181 (2245)
-.|+.+.|.|.+.+. |.+.|.|+|+|..+..+.++.+...++...|.|.+++.+|+|.|+|.|.|..|....++.|.|.
T Consensus 15 c~~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~v~ 94 (212)
T 2r15_A 15 STAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQ 94 (212)
T ss_dssp ECSSEEEEEEEBSSCCSSCEEEEEETTEECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHH
T ss_pred EcCceEEEEEEEeccCCCceEEEEECCEEccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEEEe
Confidence 468888999999874 6889999999999999899999888888889999999999999999999999888878778765
Q ss_pred ---------------------CCCeeecCCCceEEcCCCeEEEEEEEecCCCceEEEeeCceeeecCCceEEEEe-CCeE
Q psy7042 182 ---------------------TPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVL-DDYI 239 (2245)
Q Consensus 182 ---------------------~~P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~-~~~~ 239 (2245)
.|+.+...|....+.+|+.+.|.|.+.|.|.|.+.|+|+|..+....++.+... +...
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~ 174 (212)
T 2r15_A 95 AYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQTDHCNLKFEAGRTA 174 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTCCEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEETTTEE
T ss_pred eccchhhhccccCcccccccCCCcccccCCCcEEEccCCeEEEEEEEcCCCCceEEEEECCeECccCCCEEEEEcCCCEE
Confidence 344555667788999999999999999999999999999999998888877766 5667
Q ss_pred EEEEcccCccCceeEEEEEEcCCcceEEEEEEEEecC
Q psy7042 240 IIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGL 276 (2245)
Q Consensus 240 ~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 276 (2245)
.|.|.++..+|+|.|+|.|.|..|..+.++.|.|..|
T Consensus 175 ~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~P 211 (212)
T 2r15_A 175 YFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVFIP 211 (212)
T ss_dssp EEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred EEEEcCcchHHCeEEEEEEEcCCCcEEEEEEEEEEcc
Confidence 8999999999999999999999999999999998743
No 122
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.87 E-value=3.3e-21 Score=215.40 Aligned_cols=182 Identities=21% Similarity=0.415 Sum_probs=157.2
Q ss_pred CCceecCCc--ceEEeCCCeEEEEEEEeeecCCceEEEECCeeccCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEEc
Q psy7042 90 KPDFIVPLK--DLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYN 167 (2245)
Q Consensus 90 ~P~~~~~~~--~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 167 (2245)
||.|...+. ++.+.+|+.++|.|.+.|.|.+.+.|+|+|..+....++.+...+. .|.|.+++.+|+|.|+|.|.|
T Consensus 2 pP~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~~~~ 79 (192)
T 2va4_A 2 MPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNT--ELTVRNIINSDGGPYVCRATN 79 (192)
T ss_dssp CCEEECSCCEEEEETTSCCCEEEECEEECSSCCEEEEEETTEECCCSSSEEEETTTT--EEEECSCCGGGCEEEEEEEEE
T ss_pred CCcccCCCCCcEEEEecCCCEEEEEeeccCCCCeEEEEECCeEcCCCccEEEeCCee--EEEEecCChhcCcEEEEEEEc
Confidence 677777544 5788999999999999999999999999999999888887765554 599999999999999999999
Q ss_pred CcccceeEEEEEecCCCeeecCCCceEEcCCCeEEEEEEEecCCCceEEEeeC--ceeeec-----CCceEEEEeCCeEE
Q psy7042 168 SVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKN--GRVVQS-----DDRFKFTVLDDYII 240 (2245)
Q Consensus 168 ~~g~~~~~~~l~V~~~P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~i~W~~~--g~~l~~-----~~~~~~~~~~~~~~ 240 (2245)
..|.....+.|.|..+|.+...+ ...+.+|+.+.|.|.+.|.|.+.+.|+|+ +..+.. ..++.+........
T Consensus 80 ~~~~~~~~~~l~V~~~p~~~~~~-~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (192)
T 2va4_A 80 KAGEDEKQAFLQVFVQPHIIQLK-NETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSS 158 (192)
T ss_dssp TTEEEEEEEEEEEEEEEEEEEEC-CEEECTTSEEEEEEEEEEESCCEEEEEETTTTEEECTTCBCTTSCEEEEEETTEEE
T ss_pred cccccceEEEEEEEccCcccccC-cceEEeCCeEEEEEEecCCCCCcEEEEeCCCCceeeccccccCCcEEEeeccCceE
Confidence 99988889999999999876654 45677899999999999999999999998 666643 34556666666778
Q ss_pred EEEcccCccCceeEEEEEEcCCcceEEEEEEEEe
Q psy7042 241 IFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINIT 274 (2245)
Q Consensus 241 L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 274 (2245)
|.|.++..+|+|.|+|.|.|..|..+.++.|.|.
T Consensus 159 L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 192 (192)
T 2va4_A 159 LHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIE 192 (192)
T ss_dssp EEEESCCGGGCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred EEEecCCcccCEEEEEEEEecCCceEEEEEEEeC
Confidence 9999999999999999999999999999988873
No 123
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.86 E-value=6.1e-21 Score=213.52 Aligned_cols=186 Identities=26% Similarity=0.485 Sum_probs=166.4
Q ss_pred CCCceeccCCceEEcCCCeEEEEEEecCcCCCeEEEeeCCEeccCCc--eEEEEecCcEEEEEEeeeccCCCeEEEEEEe
Q psy7042 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGA--RYRVETAGGVFRLHFNEVTDVDNGDYTCEAY 1773 (2245)
Q Consensus 1696 ~~p~~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~~~~l~~~~--~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~ 1773 (2245)
.+|.|...+....+.+|++++|.|.+.+.|.+.+.|+++|..+.... ++.+...++...|.|.+++.+|+|.|+|.+.
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 83 (194)
T 2a38_A 4 QAPTFTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKAT 83 (194)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCeEEccCCceEEECCCEEEEEEEEEecCCCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEEEE
Confidence 46788888888999999999999999999999999999999887553 5666667777889999999999999999999
Q ss_pred cCceeeEEEEEEEec---CCCccccCCCceEEcCCCeEEEEEEEeccCCcEEEEEECCEEeecCCceEEEEcCCeEEEEE
Q psy7042 1774 NSVGFAHTSSRVKIG---TPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFI 1850 (2245)
Q Consensus 1774 n~~g~~~~~~~l~V~---~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~l~i 1850 (2245)
|..|.......|.|. .+|.+...+....+.+|+.+.|.|.+.|.|.+.+.|+++|..+....++.+...+....|.|
T Consensus 84 n~~~~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i 163 (194)
T 2a38_A 84 NGSGQATSTAELLVKAETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQSSLDFQISQEGDLYSLLI 163 (194)
T ss_dssp ETTEEEEEEEEEEEECCCEEEEEEECCCCEEECTTEEEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEEETTEEEEEE
T ss_pred cCCceEeEEEEEEEccCCCCCEEEeCCccEEEcCCCEEEEEEEEEEecCCeEEEEECCEECCCCCcEEEEEcCCEEEEEE
Confidence 999988888888887 56777777788889999999999999999999999999999998888888777777788999
Q ss_pred cccCcccceEEEEEEEcCCeeeEEEEEEEEe
Q psy7042 1851 KEIRKEDAGDYTVNLSNSSGSVSGTFTINIT 1881 (2245)
Q Consensus 1851 ~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 1881 (2245)
.++..+|+|.|+|.|.|..|.....+.|.|.
T Consensus 164 ~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 194 (194)
T 2a38_A 164 AEAYPEDSGTYSVNATNSVGRATSTAELLVQ 194 (194)
T ss_dssp EEECGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CCCChhcCeEEEEEEEeCCCceEEEEEEEEC
Confidence 9999999999999999999999988888773
No 124
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.86 E-value=4.3e-21 Score=214.02 Aligned_cols=183 Identities=19% Similarity=0.238 Sum_probs=152.5
Q ss_pred CCceecCCcceEEeCCCeEEEEEEEeeec-CCceEEEE-CCeecc-CCCeEEEEE-cCcEEEEEEeeeccCCCeEEEEEE
Q psy7042 90 KPDFIVPLKDLVVPLGKLLTLQCEATGTP-VPKCRWLR-NGREIS-SGARYRVET-AGGVFRLHFNEVTDVDNGDYTCEA 165 (2245)
Q Consensus 90 ~P~~~~~~~~~~v~~G~~v~L~C~~~g~p-~~~i~W~~-~g~~l~-~~~~~~~~~-~~~~~~L~i~~~~~~d~G~Y~C~a 165 (2245)
++.|...|.++.+.+|+.++|.|.+.+.| .+.+.|+| +|..+. ...++.+.. .++...|.|.+++.+|+|.|+|.|
T Consensus 2 p~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 81 (191)
T 1epf_A 2 VLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVV 81 (191)
T ss_dssp -CCEEEESSSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred ceEEEecCCCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEE
Confidence 57788889999999999999999999876 78999999 888887 445666543 355668999999999999999999
Q ss_pred EcCc-ccceeEEEEEecCCCeeecCCCceEEcCCCeEEEEEEEecCCCceEEEeeCceeeecCCceEEEEeCCeEEEEEc
Q psy7042 166 YNSV-GFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIK 244 (2245)
Q Consensus 166 ~n~~-g~~~~~~~l~V~~~P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~ 244 (2245)
.|.. +..+..+.|.|..+|.+...+....+.+|+.+.|.|.+.|.|.+.+.|+|+|..+.......+....+ ..|.|.
T Consensus 82 ~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~-~~L~i~ 160 (191)
T 1epf_A 82 TAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSN-NYLQIR 160 (191)
T ss_dssp EETTTEEEEEEEEEEEECCSEEEECCSSEECCTTSCEEECCEEECSSCCEEEEEETTEEGGGGCCTTEEECTT-SCEEET
T ss_pred EcCCCcceEEEEEEEeecCceEecCCCcEeecCCCeEEEEEEECCCCCCEEEEEECCEEeeccCCceEEEecC-CeEEEC
Confidence 9988 55666888999999999999999999999999999999999999999999999986543222222222 269999
Q ss_pred ccCccCceeEEEEEEcCCcceEEEEEEEE
Q psy7042 245 EIRKEDAGDYTVNLSNSSGSVSGTFTINI 273 (2245)
Q Consensus 245 ~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 273 (2245)
++..+|+|.|+|.|.|..+.......+.|
T Consensus 161 ~~~~~d~G~Y~C~a~n~~~~~~~~~~i~v 189 (191)
T 1epf_A 161 GIKKTDEGTYRCEGRILARGEINFKDIQV 189 (191)
T ss_dssp TCCGGGCEEEEEEEEEGGGTEEEEEEEEE
T ss_pred CCChhhCEEEEEEEEEecceeEEEEEEEE
Confidence 99999999999999999876666555554
No 125
>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A*
Probab=99.86 E-value=2.6e-21 Score=243.39 Aligned_cols=362 Identities=16% Similarity=0.176 Sum_probs=170.7
Q ss_pred CCCCCCCeeeeecCCcEEEEeeCCCCCCCcccccEEEEeeeCCCCCeEEEc---ee--eeeeEEEecCCCCCEEEEEEEE
Q psy7042 670 PDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVG---NT--RFTTMAITGLSPGHQYEFRVYA 744 (2245)
Q Consensus 670 P~~p~~~~~~~~~~~si~lsW~~p~~~~~~~~~~y~v~~~~~~~~~w~~~~---~~--~~~~~~i~~L~p~t~y~~~v~a 744 (2245)
..+|.++.+.... .++.|+|++|.. +++.+. |.|+|+..+...|.... .. ..+.++..+|.|++.|.|||.|
T Consensus 8 l~~P~nv~~~~~~-~~~~L~W~p~~~-~~~~i~-Y~V~y~~~~~~~W~~~~~c~~~~~~~~~~t~~~l~~~~~Y~~rV~A 84 (414)
T 3se4_A 8 LKSPQKVEVDIID-DNFILRWNRSDE-SVGNVT-FSFDYQKTGMDNWIKLSGCQNITSTKCNFSSLKLNVYEEIKLRIRA 84 (414)
T ss_dssp ---CCCCCEEEET-TEEEEC-----------CE-EEEEEEESSCCCCEEEEEEEEESCSCEECCSSCCCTTSCEEEEEEE
T ss_pred CCCCceeEEEEEC-CceEEEEcCCCC-CCCCeE-EEEEEEECCCCCcEECcCccCCCCCEEECCcccccCCCcEEEEEEE
Confidence 4568899888775 568999997654 344666 99999987777897542 22 2234555678999999999999
Q ss_pred EecccCCCCCCCCccEEecCccccccccccccccCCCceeecccccccccCCceEEEEeeeccCccccccccceeccccc
Q psy7042 745 ENVYGRSDPSTTSDLITTKDTFKKQIKKRQYDFDETGKKIRGKADEKVSDYDQYVFDIYSKYVPQPVDIKTSSVYDHYDI 824 (2245)
Q Consensus 745 ~n~~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 824 (2245)
.| .|.+.++....+...
T Consensus 85 ~n-~~~S~~s~~~~~~~~-------------------------------------------------------------- 101 (414)
T 3se4_A 85 EK-ENTSSWYEVDSFTPF-------------------------------------------------------------- 101 (414)
T ss_dssp EE-TTEEEEEECCCBCHH--------------------------------------------------------------
T ss_pred ee-CCcCCCEecCceeec--------------------------------------------------------------
Confidence 99 443322211000000
Q ss_pred ccccccCceeEEEEeeecccCCeeEEEeeccCCchhhhhhheeeeeeeccCCCceEeecccccCCcceEEEEEEecCCCC
Q psy7042 825 LEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFEVLDRPHP 904 (2245)
Q Consensus 825 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ 904 (2245)
....++|
T Consensus 102 -------------------------------------------------------------------------~~~~~~p 108 (414)
T 3se4_A 102 -------------------------------------------------------------------------RKAQIGP 108 (414)
T ss_dssp -------------------------------------------------------------------------HHCCCCC
T ss_pred -------------------------------------------------------------------------ccceeCC
Confidence 0012345
Q ss_pred CcccEEeeeeCceEEEEecCCCCCCC------CccceEEEeeeecCCCceEEecceeeeceEEEecCCCCceeeEEEEEE
Q psy7042 905 PENLHADEFAGDSLTLYWTPPRDNGG------SEITNYVVEKKDYNSTVWTKVSSYVTTPFVRVRNLAIGSTYEFRVMAE 978 (2245)
Q Consensus 905 p~~l~~~~~~~~~~~l~W~~p~~~~g------~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~ 978 (2245)
|. +.+.. ..+++.|+|. |...+| ..+.+|+|.|...+...... .......+.|.+|.|++.|.|+|+|.
T Consensus 109 P~-v~~~~-~~~si~v~w~-P~~~~g~~~~~~~~~~~Y~v~y~~~~~~~~~~--~~~~~~~~~i~~L~p~t~Y~~~V~A~ 183 (414)
T 3se4_A 109 PE-VHLEA-EDKAIVIHIS-PGTKDSVMWALDGLSFTYSLVIWKNSSGVEER--IENIYSRHKIYKLSPETTYCLKVKAA 183 (414)
T ss_dssp CE-EEEEE-CSSCEEEEEE-CSSSSCTTTGGGGSSCEEEEEEEETTTCCEEE--EEEECSEEEECCCCTTCEEEEEEEEE
T ss_pred Ce-EEEEE-cCCEEEEEEE-cCCCCCceeeeecCcEEEEEEEEECCCCceEE--EecCCcEEEEcCCCCCCeEEEEEEEE
Confidence 54 55543 3568999999 653332 25789999998766554333 23456789999999999999999999
Q ss_pred ec--cccCCCccccCcccccCCCCCC-CCCCCCeeEeecCCeEEEEecCCCCCCCCccceEEEEEEec--------CCcc
Q psy7042 979 NQ--YGLSKPALTIDPIKAKHPFDVP-GAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLI--------SDDK 1047 (2245)
Q Consensus 979 n~--~g~~~~s~~~~~~~~~t~~~~p-~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~y~v~~~~~--------~~~~ 1047 (2245)
|. .|.|+.+ ....+.+....| .+|.++++...+ .++.|+|++|. ...+|.|+|+.. +...
T Consensus 184 n~~~~g~g~~S---~~~~~~t~~~~~~~~P~~v~~~~~~-~~~~l~W~pp~-----~~~~Y~v~y~~~~~~~~~~~~~~~ 254 (414)
T 3se4_A 184 LLTSWKIGVYS---PVHCIKTTVENELPPPENIEVSVQN-QNYVLKWDYTY-----ANMTFQVQWLHAFLKRNPGNHLYK 254 (414)
T ss_dssp CTTTCCEEEEC---CCEEEECCSCCSSCCCEEEEEEEET-TEEEEEEECSS-----SSCEEEEEEEESGGGSCCCC--CC
T ss_pred eccCCCCCccC---cccccccccccccCCCCccEEEEec-CCeEEEECCCC-----CCeEEEEEEEehhccccccccccC
Confidence 94 6777766 344455555544 478888887654 67999999975 135999999863 2344
Q ss_pred ceecccc-ccCCcceeEEEEeecccccCCccCchhhhhhhhhcccccccc-cccCCcEEEEEEEEEecCCCCCCCCCCcc
Q psy7042 1048 WIKASMA-HIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVT-SLIENHEYEFRVCAVNAAGQGPWSSSSDI 1125 (2245)
Q Consensus 1048 ~~~~~~~-~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~L~~~~~Y~~~v~A~n~~G~~~~s~~~~~ 1125 (2245)
|...... .+.... |.+. +|.+++.|.|+|+|.|..|.|+++....+
T Consensus 255 w~~~~~~~~~~~~~--------------------------------~~~t~~l~~~~~Y~~rV~A~n~~g~s~~s~~~~~ 302 (414)
T 3se4_A 255 WKQIPDCENVKTTQ--------------------------------CVFPQNVFQKGIYLLRVQASDGNNTSFWSEEIKF 302 (414)
T ss_dssp CCBCSTTTTBSSSE--------------------------------EEEEGGGSCSSEEEEEEEEECSSSEEEECCCEEE
T ss_pred ceECCCccCCCCCE--------------------------------EcCCcccccCccEEEEEEEecCCCcccccccccc
Confidence 5533111 111111 2354 69999999999999999998776532211
Q ss_pred eeecCCCCCCccccCCCceeEEEEcCCeEEEEEEeeecCCCcceEEeCCeecCCCCcEEEEEccceEEEEecCccccccc
Q psy7042 1126 IMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATDS 1205 (2245)
Q Consensus 1126 ~~~~~~p~~p~~~~~~~~~~~~v~~~~~~~l~~~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1205 (2245)
.+...
T Consensus 303 ~t~~~--------------------------------------------------------------------------- 307 (414)
T 3se4_A 303 DTEIQ--------------------------------------------------------------------------- 307 (414)
T ss_dssp ETTCC---------------------------------------------------------------------------
T ss_pred cchhc---------------------------------------------------------------------------
Confidence 11000
Q ss_pred eeEEEEEEcCCcceeEEEEEEEECCCCCCCCCceeeeccCCcEEEEecCCCCCCCc-----ceeeeEEEEeeccccceEE
Q psy7042 1206 GSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGS-----PITNYVVEKYESATGFWSK 1280 (2245)
Q Consensus 1206 ~~Y~~~a~n~~g~~~~s~~~~v~~~p~~p~~~~~~~~~~~~s~~l~W~~p~~~~g~-----~i~~Y~v~~~~~~~~~~~~ 1280 (2245)
+.+.|| . +.+.. ..+++.|.|++|...+|. .+.+|.|.|++........
T Consensus 308 -----------------------~~~~pP-~-l~~~~-~~~si~v~W~~P~~~~~~~~~~~~~~~Y~v~y~~~~~~~~~~ 361 (414)
T 3se4_A 308 -----------------------AFLLPP-V-FNIRS-LSDSFHIYIGAPKQSGNTPVIQDYPLIYEIIFWENTSNAERK 361 (414)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -----------------------cccCCC-e-EEEEE-CCCeEEEEEECCCCccccchhhcCCeEEEEEEEECCCCceEE
Confidence 112233 2 44443 346899999998766542 4788998877653332212
Q ss_pred cccceecceEEecCCCCCceEEEEEEEecc----ccCCCCccc
Q psy7042 1281 LSSFVRSPAYDVFGLETNRQYRFRVRAENQ----YGVSEPLEL 1319 (2245)
Q Consensus 1281 ~~~~~~~~~~~l~~L~~~t~Y~~~v~A~n~----~G~~~~s~~ 1319 (2245)
+ ....+.+.|.+|++++.|.|+|+|.+. .|.|+.|..
T Consensus 362 ~--~~~~~~~~l~~L~p~t~Y~~~V~A~~~~~~~~g~g~~S~~ 402 (414)
T 3se4_A 362 I--IEKKTDVTVPNLKPLTVYCVKARAHTMDEKLNKSSVFSDA 402 (414)
T ss_dssp -------------------------------------------
T ss_pred E--EecCCeEEeCCCCCCCeEEEEEEEEecccccCCCCCCCCC
Confidence 2 245678999999999999999999983 477765543
No 126
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=99.86 E-value=2.1e-20 Score=223.43 Aligned_cols=265 Identities=21% Similarity=0.250 Sum_probs=200.1
Q ss_pred EEEeeCCCCCCCCCeeeeecCCcEEEEeeCCCCCCCcccccEEEEeeeCC-CCCeEEE-ceeeeeeEEEecCCCCCEEEE
Q psy7042 663 KIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHP-MSSWIRV-GNTRFTTMAITGLSPGHQYEF 740 (2245)
Q Consensus 663 ~l~v~~~P~~p~~~~~~~~~~~si~lsW~~p~~~~~~~~~~y~v~~~~~~-~~~w~~~-~~~~~~~~~i~~L~p~t~y~~ 740 (2245)
.+....+|.+|.++.+..++.+++.|+|++|. +.+.+|.|+|+... ...|... .......+.+.+|.|++.|.|
T Consensus 8 ~~~~~~~p~~P~~l~~~~~~~~sv~l~W~~~~----~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~ 83 (283)
T 1tdq_A 8 GGGGIPVIDGPTQILVRDVSDTVAFVEWTPPR----AKVDFILLKYGLVGGEGGKTTFRLQPPLSQYSVQALRPGSRYEV 83 (283)
T ss_dssp ----CCSSCCCEEEEEEEECSSCEEEEEECCS----SCCSEEEEEEEESSSSCCCEEEEECTTCSEEEECSCCTTCEEEE
T ss_pred ccccccCCCCCcEEEEEecCCCeEEEEEECCC----CceeEEEEEEEEecCCCCcEEEEeCCCCCEEEecCCCCCCEEEE
Confidence 34455789999999999999999999999764 57889999997642 3344332 233457899999999999999
Q ss_pred EEEEEecccCCCCCCCCccEEecCccccccccccccccCCCceeecccccccccCCceEEEEeeeccCccccccccceec
Q psy7042 741 RVYAENVYGRSDPSTTSDLITTKDTFKKQIKKRQYDFDETGKKIRGKADEKVSDYDQYVFDIYSKYVPQPVDIKTSSVYD 820 (2245)
Q Consensus 741 ~v~a~n~~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 820 (2245)
+|.|.|..|.+.+..
T Consensus 84 ~V~a~~~~g~s~~~~----------------------------------------------------------------- 98 (283)
T 1tdq_A 84 SISAVRGTNESDASS----------------------------------------------------------------- 98 (283)
T ss_dssp EEEEEETTEECCCEE-----------------------------------------------------------------
T ss_pred EEEEECCCCCCCCee-----------------------------------------------------------------
Confidence 999999777642110
Q ss_pred ccccccccccCceeEEEEeeecccCCeeEEEeeccCCchhhhhhheeeeeeeccCCCceEeecccccCCcceEEEEEEec
Q psy7042 821 HYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFEVLD 900 (2245)
Q Consensus 821 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 900 (2245)
.....
T Consensus 99 ---------------------------------------------------------------------------~~~~t 103 (283)
T 1tdq_A 99 ---------------------------------------------------------------------------TQFTT 103 (283)
T ss_dssp ---------------------------------------------------------------------------EEEEC
T ss_pred ---------------------------------------------------------------------------EEEEC
Confidence 01113
Q ss_pred CCCCCcccEEeeeeCceEEEEecCCCCCCCCccceEEEeeeecCCCceEEecceee---eceEEEecCCCCceeeEEEEE
Q psy7042 901 RPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVT---TPFVRVRNLAIGSTYEFRVMA 977 (2245)
Q Consensus 901 ~P~~p~~l~~~~~~~~~~~l~W~~p~~~~g~~i~~y~i~~~~~~~~~~~~~~~~~~---~~~~~i~~L~p~~~y~~~v~a 977 (2245)
+|.+|.++.+...+.+++.|+|++|. ..+.+|.|++...+...+..+..... ...+.+.+|.|++.|.|+|.|
T Consensus 104 ~p~~P~~l~~~~~~~~sv~l~W~~p~----~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A 179 (283)
T 1tdq_A 104 EIDAPKNLRVGSRTATSLDLEWDNSE----AEAQEYKVVYSTLAGEQYHEVLVPKGIGPTTKTTLTDLVPGTEYGVGISA 179 (283)
T ss_dssp CCCCCEEEEEEEECSSCEEEEEECCS----SCCSEEEEEEEETTCCCCEEEEEECCSSSEEEEEECSCCTTCEEEEEEEE
T ss_pred CCCCCCceEEEecCCCeEEEEecCCC----CCccEEEEEEEeCCCCcceEEECCCCCcccceEEEecCCCCCEEEEEEEE
Confidence 67889999999999999999999986 27899999999877766655555555 788999999999999999999
Q ss_pred EeccccCCCccccCcccccCCCCCCCCCCCCeeEeecCCeEEEEecCCCCCCCCccceEEEEEEecCCccceeccccccC
Q psy7042 978 ENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIP 1057 (2245)
Q Consensus 978 ~n~~g~~~~s~~~~~~~~~t~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~ 1057 (2245)
.|..|.+.+.. +... ..|.+|.++.+...+.+++.|+|++|. +++.+|.|+|+..++.. .... ++
T Consensus 180 ~n~~g~s~~~~----~~~~---t~~~~P~~l~~~~~~~~sv~l~W~~p~----~~i~~Y~v~~~~~~~~~-~~~~---~~ 244 (283)
T 1tdq_A 180 VMNSKQSIPAT----MNAR---TELDSPRDLMVTASSETSISLIWTKAS----GPIDHYRITFTPSSGIS-SEVT---VP 244 (283)
T ss_dssp EETTEECCCEE----EEEE---CCCCCCEEEEEEEECSSCEEEEEECCC----SCCSEEEEEEECSSSCC-EEEE---EE
T ss_pred EeCCCCCcceE----EEec---CCCCCCCccEEeEecCCEEEEEEeCCC----CcccEEEEEEEcCCCCe-eEEE---eC
Confidence 99998775541 2222 235578899999999999999999874 45899999998765422 1111 11
Q ss_pred CcceeEEEEeecccccCCccCchhhhhhhhhcccccccccccCCcEEEEEEEEEecCCCCCCC
Q psy7042 1058 DTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWS 1120 (2245)
Q Consensus 1058 ~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~v~A~n~~G~~~~s 1120 (2245)
.... .++|.+|.+++.|.|+|+|.|..|.+.++
T Consensus 245 ~~~~------------------------------~~~i~~L~p~t~Y~~~V~A~~~~g~s~~~ 277 (283)
T 1tdq_A 245 RDRT------------------------------SYTLTDLEPGAEYIISITAERGRQQSLES 277 (283)
T ss_dssp SSCS------------------------------EEEECCCCTTCCEEEEEEEEETTEECCCE
T ss_pred CCcc------------------------------EEEECCCCCCCEEEEEEEEEcCCCCCcce
Confidence 1111 12699999999999999999999987644
No 127
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=99.86 E-value=3.4e-20 Score=222.17 Aligned_cols=265 Identities=22% Similarity=0.289 Sum_probs=200.8
Q ss_pred cCCCCCcccEEeeeeCceEEEEecCCCCCCCCccceEEEeeeecC-CCceEEecceeeeceEEEecCCCCceeeEEEEEE
Q psy7042 900 DRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYN-STVWTKVSSYVTTPFVRVRNLAIGSTYEFRVMAE 978 (2245)
Q Consensus 900 ~~P~~p~~l~~~~~~~~~~~l~W~~p~~~~g~~i~~y~i~~~~~~-~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~ 978 (2245)
.+|.+|.+|.+...+++++.|+|++|. | .+.+|.|+|+... ...|..+........+.|.+|.|++.|.|+|+|.
T Consensus 19 ~~p~~P~~l~~~~~~~~sv~l~W~~p~---~-~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~ 94 (290)
T 3r8q_A 19 PAIPAPTDLKFTQVTPTSLSAQWTPPN---V-QLTGYRVRVTPKEKTGPMKEINLAPDSSSVVVSGLMVATKYEVSVYAL 94 (290)
T ss_dssp -CCCCCEEEEEEEECSSCEEEEEECCS---S-CCCEEEEEEEESSSSSCCEEEEECTTCCEEEECSCCSSCEEEEEEEEE
T ss_pred CCCCCCCceEEEECCCCEEEEEEeCCC---C-CeeEEEEEEEeCCCCCceEEEEcCCCccEEEeCCCCCCCEEEEEEEEE
Confidence 578899999999999999999999982 3 8899999998765 4566666666677899999999999999999999
Q ss_pred eccccCCCccccCcccccCCCCCCCCCCCCeeEeecCCeEEEEecCCCCCCCCccceEEEEEEecCCccceeccccccCC
Q psy7042 979 NQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPD 1058 (2245)
Q Consensus 979 n~~g~~~~s~~~~~~~~~t~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~ 1058 (2245)
|..|.+.++. ..+.+.. .|.+|.++.+...+.+++.|+|.+|. +++.+|.|+|+..++..+.......
T Consensus 95 ~~~g~s~~s~----~~~~t~~-~~~~P~~l~~~~~~~~sv~l~W~~p~----~~~~~Y~v~~~~~~~~~~~~~~~~~--- 162 (290)
T 3r8q_A 95 KDTLTSRPAQ----GVVTTLE-NVSPPRRARVTDATETTITISWRTKT----ETITGFQVDAVPANGQTPIQRTIKP--- 162 (290)
T ss_dssp ETTEECCCEE----EEEECCC-CCCCCEEEEEEEECSSCEEEEEECCS----CCCCEEEEEEEESSSCCCEEEEECT---
T ss_pred eCCCCCCCcc----eeEecCC-CCCCCceeEEEEcCCCeEEEEEeCCC----CcccEEEEEEEECCCCcceEEecCC---
Confidence 9999887762 2333333 34788999999999999999999874 3589999999876654332221111
Q ss_pred cceeEEEEeecccccCCccCchhhhhhhhhcccccccccccCCcEEEEEEEEEecCCCCCCCCCCcceeecCCCCCCccc
Q psy7042 1059 TSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSDIIMCCAPPCAPKIT 1138 (2245)
Q Consensus 1059 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~v~A~n~~G~~~~s~~~~~~~~~~~p~~p~~~ 1138 (2245)
.. +.++|.+|.+++.|.|+|+|.|..|.+.+.. .
T Consensus 163 ~~------------------------------~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~~----~------------ 196 (290)
T 3r8q_A 163 DV------------------------------RSYTITGLQPGTDYKIYLYTLNDNARSSPVV----I------------ 196 (290)
T ss_dssp TC------------------------------SEEEECSCCTTCEEEEEEEEEETTEECCCEE----E------------
T ss_pred Cc------------------------------cEEEECCCCCCCEEEEEEEEEeCCcccCCEE----E------------
Confidence 11 1126999999999999999999887643110 0
Q ss_pred cCCCceeEEEEcCCeEEEEEEeeecCCCcceEEeCCeecCCCCcEEEEEccceEEEEecCccccccceeEEEEEEcCCcc
Q psy7042 1139 SDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQLVNTVGS 1218 (2245)
Q Consensus 1139 ~~~~~~~~~v~~~~~~~l~~~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~a~n~~g~ 1218 (2245)
T Consensus 197 -------------------------------------------------------------------------------- 196 (290)
T 3r8q_A 197 -------------------------------------------------------------------------------- 196 (290)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeEEEEEEEECCCCCCCCCceeeeccCCcEEEEecCCCCCCCcceeeeEEEEeeccccceEEc-ccceecceEEecCCCC
Q psy7042 1219 DSASCKVYVVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKL-SSFVRSPAYDVFGLET 1297 (2245)
Q Consensus 1219 ~~~s~~~~v~~~p~~p~~~~~~~~~~~~s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~~~~~~-~~~~~~~~~~l~~L~~ 1297 (2245)
...+.|.+| .++.+...+.+++.|+|.+|. | .+.+|.|+|.......+... ......+++.+.+|.+
T Consensus 197 -------~~~t~p~~P-~~l~~~~~~~~sv~l~W~~p~---~-~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p 264 (290)
T 3r8q_A 197 -------DASTAIDAP-SNLRFLATTPNSLLVSWQPPR---A-RITGYIIKYEKPGSPPREVVPRPRPGVTEATITGLEP 264 (290)
T ss_dssp -------EEECCCCCC-EEEEEEEEETTEEEEEEECCS---S-CCCEEEEEEECTTSCCEECSSCCCTTCCEEEECSCCT
T ss_pred -------EecCCCCCC-CccEEEeeCCCEEEEEEeCCC---C-cccEEEEEEEeCCCCcceeEeccCCCccEEEECCCCC
Confidence 001122333 356777778889999999875 2 48999999988766555433 2335678899999999
Q ss_pred CceEEEEEEEeccccCCCCcc
Q psy7042 1298 NRQYRFRVRAENQYGVSEPLE 1318 (2245)
Q Consensus 1298 ~t~Y~~~v~A~n~~G~~~~s~ 1318 (2245)
++.|.|+|+|.|..|.|.|..
T Consensus 265 ~t~Y~~~V~A~~~~g~s~p~~ 285 (290)
T 3r8q_A 265 GTEYTIYVIALKNNQKSEPLI 285 (290)
T ss_dssp TCEEEEEEEEEETTEECCCEE
T ss_pred CCEEEEEEEEEeCCCcCCccc
Confidence 999999999999999998643
No 128
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.86 E-value=2.1e-20 Score=209.66 Aligned_cols=186 Identities=25% Similarity=0.453 Sum_probs=164.0
Q ss_pred CCCceeccCCceEEcCCCeEEEEEEecCcCCCeEEEeeCCEeccCC-ceEEEEe-cCcEEEEEEeeeccCCCeEEEEEEe
Q psy7042 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSG-ARYRVET-AGGVFRLHFNEVTDVDNGDYTCEAY 1773 (2245)
Q Consensus 1696 ~~p~~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~~~~l~~~-~~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~~~ 1773 (2245)
.+|.|...+.+..+.+|++++|.|.+.+.|.+.+.|++++..+... .++.+.. .++...|.|.+++.+|+|.|+|.+.
T Consensus 3 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 82 (197)
T 2j8h_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRAT 82 (197)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEEE
T ss_pred CCCEEEEcCCccEEcCCCEEEEEEEEeecCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEEE
Confidence 5788988889999999999999999999999999999999998653 4565543 5667789999999999999999999
Q ss_pred cCceeeEEEEEEEecCCCcccc-----CCCceEEcCCCeEEEEEEEeccCCcEEEEEECCEEeecCCceEEEEcCCeEEE
Q psy7042 1774 NSVGFAHTSSRVKIGTPPRIDR-----MPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIII 1848 (2245)
Q Consensus 1774 n~~g~~~~~~~l~V~~~p~~~~-----~~~~~~~~~g~~~~l~C~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~l 1848 (2245)
|..|.....+.|.|..+|.+.. .+....+.+|+.+.|.|.+.|.|.+.+.|++++..+....++.+........|
T Consensus 83 n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L 162 (197)
T 2j8h_A 83 NQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSL 162 (197)
T ss_dssp ETTEEEEEEEEEEEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEEEEESCCEEEEEESSCEECSSSSCEEEECSSEEEE
T ss_pred ECCCceeEEEEEEEcCCCcCCCCccccccCeEEEeCCCEEEEEEEEEecCCCcEEEEECCEEeecCCCEEEEEcCCceEE
Confidence 9999988889999987766543 23456788999999999999999999999999999988888888777778899
Q ss_pred EEcc-cCcccceEEEEEEEcCCeeeEEEEEEEEe
Q psy7042 1849 FIKE-IRKEDAGDYTVNLSNSSGSVSGTFTINIT 1881 (2245)
Q Consensus 1849 ~i~~-~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 1881 (2245)
.|.+ +..+|+|.|+|.|.|..|..+..+.|.|.
T Consensus 163 ~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 196 (197)
T 2j8h_A 163 VFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVA 196 (197)
T ss_dssp ECTTCCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEeCCCCcccCEeEEEEEEeCCCcEeEEEEEEEe
Confidence 9999 99999999999999999999999998885
No 129
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.86 E-value=2.9e-21 Score=235.63 Aligned_cols=175 Identities=10% Similarity=0.111 Sum_probs=117.7
Q ss_pred CCCceecCCcceEEeCC--CeEEEEEEEeee-c-CCceEEEECCeeccCCCeE-EEEEcCcE----EEEEEeeeccCCCe
Q psy7042 89 EKPDFIVPLKDLVVPLG--KLLTLQCEATGT-P-VPKCRWLRNGREISSGARY-RVETAGGV----FRLHFNEVTDVDNG 159 (2245)
Q Consensus 89 ~~P~~~~~~~~~~v~~G--~~v~L~C~~~g~-p-~~~i~W~~~g~~l~~~~~~-~~~~~~~~----~~L~i~~~~~~d~G 159 (2245)
.+|.+...+.......| +.++|.|.+.|. | .+.|.|+|||..+..+... .....++. ..|.|.++..+|+|
T Consensus 6 ~~P~v~~~~~~~~~~~~~~~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g 85 (323)
T 2wqr_A 6 TPPTVKILQSSCDGGGHFPPTIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDR 85 (323)
T ss_dssp CCCCCEEEEECCCTTSCCCSEEEEEEEEEEECCCCEEEEEEETTEECCGGGEEEEEEEETTEEEEEEEEEEEHHHHHTTC
T ss_pred CCCEEEEeCCChHHhccCCCcEEEEEEEeCeECCCeEEEEEECCEEcccceecCCcCccCCcEEEEEEEEEcHHHcCCCC
Confidence 45666554333222334 699999999986 4 4789999999998755322 11112332 25788888888999
Q ss_pred EEEEEEEcCcccceeEEEEE---ecCCCe-eecCCCceEEcCCCeEEEEEEEecC-CCc---eEEEeeCc-eeeecCCce
Q psy7042 160 DYTCEAYNSVGFAHTSSRVK---IGTPPR-IDRMPNALYIPEGDNTKVKIFYAGD-QPM---EVSLTKNG-RVVQSDDRF 230 (2245)
Q Consensus 160 ~Y~C~a~n~~g~~~~~~~l~---V~~~P~-~~~~~~~~~v~~G~~~~l~C~~~g~-p~~---~i~W~~~g-~~l~~~~~~ 230 (2245)
.|+|.|.|..+....++.+. +..+|. +...|....+.+|+.++|.|.+.|. |.+ .|+|||++ ..+......
T Consensus 86 ~Y~C~a~n~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~~ 165 (323)
T 2wqr_A 86 TYTCQVTYQGHTFEDSTKKCADSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRK 165 (323)
T ss_dssp CEEEEEEETTEEEEEEECCCCCSSGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCCE
T ss_pred cEEEEEEeCCCCcceeeecCCCCCCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccccCC
Confidence 99999999877654443321 112343 3455666678899999999999885 555 89999964 554332211
Q ss_pred EEEEeC----CeEEEEEcccCccCceeEEEEEEcCCc
Q psy7042 231 KFTVLD----DYIIIFIKEIRKEDAGDYTVNLSNSSG 263 (2245)
Q Consensus 231 ~~~~~~----~~~~L~i~~~~~~d~G~Y~C~a~n~~g 263 (2245)
.....+ ..+.|.|.++..+|+|.|+|.|.|..+
T Consensus 166 ~~~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~ 202 (323)
T 2wqr_A 166 EEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHL 202 (323)
T ss_dssp EEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTS
T ss_pred CccCCCCCEEEEEEEEECHHHccCCCCEEEEEECCCC
Confidence 110111 234799999999999999999998753
No 130
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.86 E-value=5e-21 Score=213.24 Aligned_cols=180 Identities=17% Similarity=0.330 Sum_probs=149.3
Q ss_pred CCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECCeeccC--CCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEEc
Q psy7042 90 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISS--GARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYN 167 (2245)
Q Consensus 90 ~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~--~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 167 (2245)
+|.|...|....+.+|+.++|.|.+.+.|.+.+.|+|++..+.. ..++.+...+ .|.|.+++.+|+|.|+|.|.|
T Consensus 2 ~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~~~~ 78 (189)
T 2v5t_A 2 MLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANN---NLQILNINKSDEGIYRCEGRV 78 (189)
T ss_dssp CCEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEC-----CBCCCTTEEECTTS---CEEETTCCGGGCEEEEEEEEE
T ss_pred CceeeccCCCEEEeCCCcEEEEEEEcCCCCCEEEEEECCccceeccCCeEEEecCC---CEEEeeCCHhHCcEEEEEEEE
Confidence 68899999999999999999999999999999999999988763 4456554444 499999999999999999998
Q ss_pred Ccccce--eEEEEEecCCCeeecCCC--ceEEcCCCeEEEEEEEecCCCceEEEeeCceeeecCCceEEEEeCCeEEEEE
Q psy7042 168 SVGFAH--TSSRVKIGTPPRIDRMPN--ALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFI 243 (2245)
Q Consensus 168 ~~g~~~--~~~~l~V~~~P~~~~~~~--~~~v~~G~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i 243 (2245)
..+... ..+.|.|..+|.+...+. ...+.+|+.+.|.|.+.|.|.+.+.|+++|..+....++.+.. ....|.|
T Consensus 79 ~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~--~~~~L~i 156 (189)
T 2v5t_A 79 EARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKG--SNTELTV 156 (189)
T ss_dssp TTTTEEEEEEEEEEEEEEEEEECSCCEEEEETTSCCCEEEECEEEEESCCEEEEEETTEECCCSSSEEEET--TTTEEEE
T ss_pred cCCCceEEEEEEEEecCCCCcccccccccccccCCCcEEEEEEEccCCCCeEEEEECCEECcCCCcEEEec--CCCEEEE
Confidence 875433 466788888888876655 4577899999999999999999999999999998777665543 3347999
Q ss_pred cccCccCceeEEEEEEcCCcceEEEEEEEEe
Q psy7042 244 KEIRKEDAGDYTVNLSNSSGSVSGTFTINIT 274 (2245)
Q Consensus 244 ~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 274 (2245)
.++..+|+|.|+|.|.|..|....++.|.|.
T Consensus 157 ~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 187 (189)
T 2v5t_A 157 RNIINSDGGPYVCRATNKAGEDEKQAFLQVF 187 (189)
T ss_dssp CSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred cCCChhhCeeEEEEEEeCCCceeEEEEEEEE
Confidence 9999999999999999999999999999886
No 131
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=99.85 E-value=6.5e-20 Score=219.16 Aligned_cols=267 Identities=19% Similarity=0.221 Sum_probs=199.3
Q ss_pred ecCCCCCcccEEeeeeCceEEEEecCCCCCCCCccceEEEeeeecC-CCceEEecceeeeceEEEecCCCCceeeEEEEE
Q psy7042 899 LDRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYN-STVWTKVSSYVTTPFVRVRNLAIGSTYEFRVMA 977 (2245)
Q Consensus 899 ~~~P~~p~~l~~~~~~~~~~~l~W~~p~~~~g~~i~~y~i~~~~~~-~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a 977 (2245)
..+|.+|.++.+...+.+++.|+|+++. ..+.+|.|+|+... .+.|...........+.|.+|.|++.|.|+|+|
T Consensus 12 ~~~p~~P~~l~~~~~~~~sv~l~W~~~~----~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a 87 (283)
T 1tdq_A 12 IPVIDGPTQILVRDVSDTVAFVEWTPPR----AKVDFILLKYGLVGGEGGKTTFRLQPPLSQYSVQALRPGSRYEVSISA 87 (283)
T ss_dssp CCSSCCCEEEEEEEECSSCEEEEEECCS----SCCSEEEEEEEESSSSCCCEEEEECTTCSEEEECSCCTTCEEEEEEEE
T ss_pred ccCCCCCcEEEEEecCCCeEEEEEECCC----CceeEEEEEEEEecCCCCcEEEEeCCCCCEEEecCCCCCCEEEEEEEE
Confidence 3588999999999999999999999986 27899999997543 344555555567789999999999999999999
Q ss_pred EeccccCCCccccCcccccCCCCCCCCCCCCeeEeecCCeEEEEecCCCCCCCCccceEEEEEEecCCccceeccccccC
Q psy7042 978 ENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIP 1057 (2245)
Q Consensus 978 ~n~~g~~~~s~~~~~~~~~t~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~ 1057 (2245)
.|..|.+.+. ...+.+ .|.+|.++++...+.+++.|+|++|. +++.+|.|+|+..++..+....+....
T Consensus 88 ~~~~g~s~~~----~~~~~t---~p~~P~~l~~~~~~~~sv~l~W~~p~----~~i~~Y~v~~~~~~~~~~~~~~~~~~~ 156 (283)
T 1tdq_A 88 VRGTNESDAS----STQFTT---EIDAPKNLRVGSRTATSLDLEWDNSE----AEAQEYKVVYSTLAGEQYHEVLVPKGI 156 (283)
T ss_dssp EETTEECCCE----EEEEEC---CCCCCEEEEEEEECSSCEEEEEECCS----SCCSEEEEEEEETTCCCCEEEEEECCS
T ss_pred ECCCCCCCCe----eEEEEC---CCCCCCceEEEecCCCeEEEEecCCC----CCccEEEEEEEeCCCCcceEEECCCCC
Confidence 9998877543 223333 46788999999999999999999987 358999999988765544322211100
Q ss_pred CcceeEEEEeecccccCCccCchhhhhhhhhcccccccccccCCcEEEEEEEEEecCCCCCCCCCCcceeecCCCCCCcc
Q psy7042 1058 DTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSDIIMCCAPPCAPKI 1137 (2245)
Q Consensus 1058 ~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~v~A~n~~G~~~~s~~~~~~~~~~~p~~p~~ 1137 (2245)
.... .++|.+|.+++.|.|+|+|.|..|.+.+. .. .
T Consensus 157 ~~~~------------------------------~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~---~~-~---------- 192 (283)
T 1tdq_A 157 GPTT------------------------------KTTLTDLVPGTEYGVGISAVMNSKQSIPA---TM-N---------- 192 (283)
T ss_dssp SSEE------------------------------EEEECSCCTTCEEEEEEEEEETTEECCCE---EE-E----------
T ss_pred cccc------------------------------eEEEecCCCCCEEEEEEEEEeCCCCCcce---EE-E----------
Confidence 0011 12699999999999999999987754211 00 0
Q ss_pred ccCCCceeEEEEcCCeEEEEEEeeecCCCcceEEeCCeecCCCCcEEEEEccceEEEEecCccccccceeEEEEEEcCCc
Q psy7042 1138 TSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQLVNTVG 1217 (2245)
Q Consensus 1138 ~~~~~~~~~~v~~~~~~~l~~~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~a~n~~g 1217 (2245)
T Consensus 193 -------------------------------------------------------------------------------- 192 (283)
T 1tdq_A 193 -------------------------------------------------------------------------------- 192 (283)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeEEEEEEEECCCCCCCCCceeeeccCCcEEEEecCCCCCCCcceeeeEEEEeeccccceEEcccceecceEEecCCCC
Q psy7042 1218 SDSASCKVYVVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPAYDVFGLET 1297 (2245)
Q Consensus 1218 ~~~~s~~~~v~~~p~~p~~~~~~~~~~~~s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~l~~L~~ 1297 (2245)
..+.|.+ +.++.+...+.+++.|+|++|. | .+.+|.|+|....+ .+..+.......++.+.+|.+
T Consensus 193 ---------~~t~~~~-P~~l~~~~~~~~sv~l~W~~p~---~-~i~~Y~v~~~~~~~-~~~~~~~~~~~~~~~i~~L~p 257 (283)
T 1tdq_A 193 ---------ARTELDS-PRDLMVTASSETSISLIWTKAS---G-PIDHYRITFTPSSG-ISSEVTVPRDRTSYTLTDLEP 257 (283)
T ss_dssp ---------EECCCCC-CEEEEEEEECSSCEEEEEECCC---S-CCSEEEEEEECSSS-CCEEEEEESSCSEEEECCCCT
T ss_pred ---------ecCCCCC-CCccEEeEecCCEEEEEEeCCC---C-cccEEEEEEEcCCC-CeeEEEeCCCccEEEECCCCC
Confidence 0011222 2457777778889999999873 3 38999998876543 444555566778999999999
Q ss_pred CceEEEEEEEeccccCCCCccc
Q psy7042 1298 NRQYRFRVRAENQYGVSEPLEL 1319 (2245)
Q Consensus 1298 ~t~Y~~~v~A~n~~G~~~~s~~ 1319 (2245)
++.|.|+|+|.|..|.|.++..
T Consensus 258 ~t~Y~~~V~A~~~~g~s~~~~~ 279 (283)
T 1tdq_A 258 GAEYIISITAERGRQQSLESTV 279 (283)
T ss_dssp TCCEEEEEEEEETTEECCCEEE
T ss_pred CCEEEEEEEEEcCCCCCcceee
Confidence 9999999999999999987543
No 132
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.85 E-value=1.6e-20 Score=210.90 Aligned_cols=191 Identities=24% Similarity=0.494 Sum_probs=171.9
Q ss_pred cCCCceeccccccccccccceeeEEEEeccCcCeEEEEeCCeecCCCccEEEEeeCCeEEEEEecccccCCceEEEEEEe
Q psy7042 478 AKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVN 557 (2245)
Q Consensus 478 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 557 (2245)
..+|.|...+.+..+.+|+++.|.|.+.+.|.+.+.|+|++..+....++.+..++....|.|.++..+|+|.|+|.|.|
T Consensus 5 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n 84 (197)
T 3lcy_A 5 GEAPGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIATN 84 (197)
T ss_dssp CEEEEEEECCCCEEEETTSEEEEEEEEEEESCCEEEEEETTEEECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEEEEC
T ss_pred CCCCcccccCCceEEeCCCcEEEEEEEecCCCCEEEEEECCEECCCCccEEEEeCCCEEEEEEecCCccCCEEEEEEEEC
Confidence 45788888899999999999999999999999999999999999988899888888888999999999999999999999
Q ss_pred CCCCCCcceeEeEecCCCCCCCCCcccceEeeCCCeEEEEEeeeecCCCeEEEEeCCeEeeccCeEEEEecCCeEEEEEc
Q psy7042 558 KGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIR 637 (2245)
Q Consensus 558 ~~g~~~~~~~l~v~~~p~~~~~p~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~l~i~ 637 (2245)
..|.....+.|.|..+|.+...........+..|+.+.|.|.+.|.|.+.+.|++++..+....++.+........|.|.
T Consensus 85 ~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~ 164 (197)
T 3lcy_A 85 EVGEVETSSKLLLQATPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQNSENITIENTEHYTHLVMK 164 (197)
T ss_dssp SSCEEEEEEEEEEEEEEEECTTSCCCSEEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECSSEEEEEES
T ss_pred CCCceeEEEEEEEEcCCCCCCCccCCcceeecCCCeEEEEEEEeeeeCCeeEEeECCEECCCCCceEEEEcCCEEEEEEc
Confidence 99998888999998887765443333456678999999999999999999999999999988888888877777899999
Q ss_pred CCCC-CcCEEEEEEEEeCCCCceeEEEEEeeC
Q psy7042 638 DASN-VDTAPYRVVAENDLGMDSAIVKIQISD 668 (2245)
Q Consensus 638 ~~~~-~d~g~y~C~a~n~~g~~~~~~~l~v~~ 668 (2245)
++.. +|.|.|+|.|.|..|..+..+.|.|.+
T Consensus 165 ~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 196 (197)
T 3lcy_A 165 NVQRKTHAGKYKVQLSNVFGTVDAILDVEIQD 196 (197)
T ss_dssp SCCHHHHCEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred cccchhhCceEEEEEEcCcCceEEEEEEEEec
Confidence 9995 899999999999999999999998865
No 133
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=99.85 E-value=1.5e-21 Score=268.43 Aligned_cols=363 Identities=17% Similarity=0.178 Sum_probs=213.1
Q ss_pred CCCcccEEeeeeCceEEEEecCCCCCCCCccceEEEeeeec--------------CCCceEEeccee----------eec
Q psy7042 903 HPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDY--------------NSTVWTKVSSYV----------TTP 958 (2245)
Q Consensus 903 ~~p~~l~~~~~~~~~~~l~W~~p~~~~g~~i~~y~i~~~~~--------------~~~~~~~~~~~~----------~~~ 958 (2245)
..|.++.+...+++++.|+|++|...++.++.+|.|+|+.. ....|..+.... ...
T Consensus 470 ~~~~~l~v~~~s~~sv~LsW~~p~~~~~~~i~gY~V~y~~~~~~n~t~~~~~~~c~~~~w~~~~~~~~~~~~~~~~~~~~ 549 (897)
T 2dtg_E 470 NELLKFSYIRTSFDKILLRWEPYWPPDFRDLLGFMLFYKEAPYQNVTEFDGQDACGSNSWTVVDIDPPLRSNDPKSQNHP 549 (897)
T ss_dssp CCBCCCSEEEECSSCEEEECCCCCSSSCCCEEEECCCSSSCCTTTCCCCCCCCCSCCCCCCCCCSCCEEEECCCCSSSCC
T ss_pred cceeEEEEEEEecCeEEEEecCCCCCCCceeeeEEEEEEeCCCCCcccccCccccCCCcceEEecCCCcccccccccccc
Confidence 35678899999999999999999876767999999999865 234566544322 257
Q ss_pred eEEEecCCCCceeeEEEEE-EeccccCC-CccccCcccccCCCCCCCCCCCCeeEeecCCeEEEEecCCCCCCCCccceE
Q psy7042 959 FVRVRNLAIGSTYEFRVMA-ENQYGLSK-PALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRY 1036 (2245)
Q Consensus 959 ~~~i~~L~p~~~y~~~v~a-~n~~g~~~-~s~~~~~~~~~t~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~y 1036 (2245)
.+.+.+|.|++.|.|+|+| .|..|.+. ++..+..+.++|...+|++|.++++...++++|.|+|+||..++| .|.+|
T Consensus 550 ~~~l~~L~P~T~Y~~~V~A~~n~~G~~~~~~~~S~~v~~~T~~~~Ps~P~~l~~~~~s~tsI~LsW~pP~~~nG-~I~~Y 628 (897)
T 2dtg_E 550 GWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTDATNPSVPLDPISVSNSSSQIILKWKPPSDPNG-NITHY 628 (897)
T ss_dssp EEEECSCCSSCBCCBEEEECCCCCSSCCCCCCBCCCBCCBCCCCCCCCCEEEEEEECSSSCEEEEEECCCCSSS-SCSEE
T ss_pred ceEeCCCCCCcEEEEEEEEEEeccCCccccCCccceEEEECCCCCCcCCcceEEEeCCCCEEEEEEeCCCCCCC-CeeEE
Confidence 8999999999999999999 99998731 122346788889999999999999999999999999999977766 49999
Q ss_pred EEEEEecCCccceeccccccCCcceeEEEEeecccccCCccCchhhhhhhhhcccccccccccCCcEEEEEEEEEecCCC
Q psy7042 1037 IVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQ 1116 (2245)
Q Consensus 1037 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~v~A~n~~G~ 1116 (2245)
.|+|+..+.+.... . ..+ +....|.|++.|.|+|.|.+..+.
T Consensus 629 ~V~~~~~~~~~~~~------~---~~~-----------------------------~~~~~l~p~t~Y~~~V~A~~~~~~ 670 (897)
T 2dtg_E 629 LVFWERQAEDSELF------E---LDY-----------------------------CLKGLKLPSRTWSPPFESEDSQKH 670 (897)
T ss_dssp ECCEEEECCCCSCT------T---CSS-----------------------------SCSCCCCCC---------------
T ss_pred EEEEEECCCCccce------e---ccc-----------------------------ccCCCcCCccccceeeecccccCc
Confidence 99998665432110 0 000 124568999999999999998766
Q ss_pred CCCCCCCcceeecCCCCCCccccCCCceeEEEEcCCeEEEEEEeeecCCCcceEEeCC---ee---------cCCCCcEE
Q psy7042 1117 GPWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNG---DE---------VSPDGRIK 1184 (2245)
Q Consensus 1117 ~~~s~~~~~~~~~~~p~~p~~~~~~~~~~~~v~~~~~~~l~~~~~~~p~~~v~W~~~g---~~---------~~~~~~~~ 1184 (2245)
+..+...........|..| .++. .......+.+.|.......+...+.. .. ......+
T Consensus 671 s~~~~~~~~~~~~~~p~~p--------~~~~-~~~~~~s~~~~W~~~~~n~v~~~~p~~~r~~l~~~~n~t~~~~~~~~- 740 (897)
T 2dtg_E 671 NQSEYEDSAGECCSCPKTD--------SQIL-KELEESSFRKTFEDYLHNVVFVPRPSRKRRSLGDVGNAGNNEEHRPF- 740 (897)
T ss_dssp --------------------------------------------------------------------------CCSCS-
T ss_pred ccccccccCCCccCCcCcc--------cchh-hhhhhhheeeeEEEccCceEEccCCCcccccccccccccCccccceE-
Confidence 5433211111111122222 1111 22334456666654322111100000 00 0000001
Q ss_pred EEEccceEEEEecCccccccceeE--EEEEEcCCcceeE---EEEEEEECCC----CCCCCCceeeeccCCcEEEEecCC
Q psy7042 1185 FETSENQTIYRNKSAKRATDSGSY--TIQLVNTVGSDSA---SCKVYVVDKP----SPPQGPLDVSDITPESCSLSWKPP 1255 (2245)
Q Consensus 1185 ~~~~~~~~~~~~~~~~~~~~~~~Y--~~~a~n~~g~~~~---s~~~~v~~~p----~~p~~~~~~~~~~~~s~~l~W~~p 1255 (2245)
....+...+.+..+ .+...| +|.|.|..|.++. +..+.+.+.+ ..++.++.+...+.+++.|+|++|
T Consensus 741 -~~~~~~t~~~i~gL---~p~t~Y~~~V~A~n~~G~g~~~s~s~~v~~~T~~~~~~p~~P~~l~~~~~~~~sv~LsW~~P 816 (897)
T 2dtg_E 741 -EKVVNKESLVISGL---RHFTGYRIELQACNQDTPEERCSVAAYVSARTMPEAKADDIVGPVTHEIFENNVVHLMWQEP 816 (897)
T ss_dssp -CEECSCSEEEECSS---CSSCEEEECCEEESCSSSSCCBCCCCCEEEECCCCCCCCCCCCCCCCCSSSSSCCCCCCCCC
T ss_pred -EecCCceEEEECCC---CCCcEEEEEEEEEeCCCCCCCCCCCceeEEeccCccCCCCCCcceEEEeCCCCEEEEEECCC
Confidence 11123346666665 666666 5677888887543 4455565544 123456778888889999999999
Q ss_pred CCCCCcceeeeEEEEeeccccceEEc---ccceecceEEecCCCCCceEEEEEEEeccccCCCCcccC
Q psy7042 1256 LDDGGSPITNYVVEKYESATGFWSKL---SSFVRSPAYDVFGLETNRQYRFRVRAENQYGVSEPLELD 1320 (2245)
Q Consensus 1256 ~~~~g~~i~~Y~v~~~~~~~~~~~~~---~~~~~~~~~~l~~L~~~t~Y~~~v~A~n~~G~~~~s~~~ 1320 (2245)
..++|. |.+|.|+|+......+... ......+.+.+.+|.|+ .|.|+|+|.|.+|.|+++...
T Consensus 817 ~~~nG~-I~~Y~V~y~~~~~~~~~~~~~~~~~~~~~~~~l~~L~pg-tY~~rV~A~n~~G~G~~S~~v 882 (897)
T 2dtg_E 817 KEPNGL-IVLYEVSYRRYGDEELHLCDTRKHFALERGCRLRGLSPG-NYSVRIRATSLAGNGSWTEPT 882 (897)
T ss_dssp CSCSSC-EEEECCCCBSSSBCCCCCCCCSSSCCCTTCCCCCSCCSS-EECCCCCEEETTBCCCCCCCC
T ss_pred CCCCCC-EEEEEEEEEECCCcceEEEEeeeeecccCcEEECCCCCC-cEEEEEEEEeCCcccCCCCCE
Confidence 876666 9999998876654221111 11346778999999999 699999999999999876543
No 134
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.85 E-value=8e-21 Score=221.30 Aligned_cols=195 Identities=23% Similarity=0.395 Sum_probs=150.1
Q ss_pred CCCCceecCC----cceEEeCCCeEEEEEEEeeecCCceEEEECCeeccCCCeE---EEEEcCcEEEEEEeeeccCCCeE
Q psy7042 88 GEKPDFIVPL----KDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARY---RVETAGGVFRLHFNEVTDVDNGD 160 (2245)
Q Consensus 88 ~~~P~~~~~~----~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~~~~---~~~~~~~~~~L~i~~~~~~d~G~ 160 (2245)
..+|.|+.++ ..+.+.+|+.++|.|.+.|.|.+.|.|+|+|..+....++ ..... ...|.|.+++.+|+|.
T Consensus 9 ~~~P~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~--~~~L~i~~v~~~d~G~ 86 (241)
T 3grw_A 9 TGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQ--QWSLVMESVVPSDRGN 86 (241)
T ss_dssp --CCEESSGGGGSCCEEEEETTSEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEEEGG--GTEEEECSCCGGGCEE
T ss_pred CCCceeEcCCCCCCcceEEcCCCeEEEEEEecCCCCceeEEEECCcccCCCCcccceeeecc--ceEEEEEeCCcccCEE
Confidence 4578887654 4679999999999999999999999999999998755432 23322 2369999999999999
Q ss_pred EEEEEEcCcccceeEEEEEecCC----Ce-eecCCCceEEcCCCeEEEEEEEecCCCceEEEee----CceeeecCCceE
Q psy7042 161 YTCEAYNSVGFAHTSSRVKIGTP----PR-IDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTK----NGRVVQSDDRFK 231 (2245)
Q Consensus 161 Y~C~a~n~~g~~~~~~~l~V~~~----P~-~~~~~~~~~v~~G~~~~l~C~~~g~p~~~i~W~~----~g~~l~~~~~~~ 231 (2245)
|+|.|.|..|....++.|.|... |. +...+....+.+|+.+.|.|.+.|.|.+.+.|++ +|..+.......
T Consensus 87 Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~ 166 (241)
T 3grw_A 87 YTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPY 166 (241)
T ss_dssp EEEEEEETTEEEEEEEEEEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCTTTCCC
T ss_pred EEEEEeecCCceEEEEEEEEeccCCCCceeecCCCccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccCCCCcee
Confidence 99999999998888888888652 33 3345678889999999999999999999999999 888887554422
Q ss_pred EEE--------eCCeEEEEEcccCccCceeEEEEEEcCCcceEEEEEEEEecCCCCCCCCc
Q psy7042 232 FTV--------LDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPL 284 (2245)
Q Consensus 232 ~~~--------~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~ 284 (2245)
... ......|.|.++..+|+|.|+|.|.|..|..+.++.|.|..+|.++...+
T Consensus 167 ~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~~~v 227 (241)
T 3grw_A 167 VTVLKSWISESVEADVRLRLANVSERDGGEYLCRATNFIGVAEKAFWLSVHGPRAAEEELV 227 (241)
T ss_dssp EEEEEEEECSBSEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEC-----------
T ss_pred eeeeeEeeeeecCCceEEEECcCCcccCcEEEEEEecCcceEEEEEEEEecCCCCCCccce
Confidence 211 12345799999999999999999999999999999999999887765443
No 135
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=99.84 E-value=1.9e-19 Score=218.41 Aligned_cols=267 Identities=12% Similarity=0.119 Sum_probs=198.7
Q ss_pred eEeeCCCeEEEEEeeeecC-CCeEEEEeCCeEeeccCeEEEEecCCeEEEEEcCCCCCcCEEEEEEEEeCCCCceeEEEE
Q psy7042 586 AYFDKGENVVVKIPFTGYP-KPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKI 664 (2245)
Q Consensus 586 ~~~~~g~~~~l~C~~~g~p-~~~i~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l 664 (2245)
..+..|++++|.|.+.+.| .+.|.|++++..+.... ..... ..+.|.|.+++..|+|.|+|. ..|...+.+.|
T Consensus 16 v~~~~G~~v~l~C~~~~~~~~~~i~W~~~~~~~~~~~-~~~~~--~~~~L~i~~v~~~d~G~Y~C~---~~g~~~~~~~L 89 (325)
T 1n26_A 16 LTSLPGDSVTLTCPGVEPEDNATVHWVLRKPAAGSHP-SRWAG--MGRRLLLRSVQLHDSGNYSCY---RAGRPAGTVHL 89 (325)
T ss_dssp EEECTTCCEEEECTTSCTTCCSEEEEEEECSSSSCCC-EEEEE--ESSEEEECSCCGGGCEEEEEE---SSSSCSCEEEE
T ss_pred EECCCCCcEEEEeCCCCCCCCceEEEEECCccCCccc-ccccc--ccceEEecccchhhCeEeEEE---eCCEEeeeEEE
Confidence 4446899999999998765 78999999887652111 11111 236899999999999999999 37888889999
Q ss_pred EeeCCCCCCCCCeeee-ecCCcEEEEeeCCCCCCCcccccEEEEeeeC-C--CCCe-EEEc---eeeeeeEEEecCC-CC
Q psy7042 665 QISDRPDPPQFPTVED-IGHDSLALVWRAPIWDGGSNITNYIVEKREH-P--MSSW-IRVG---NTRFTTMAITGLS-PG 735 (2245)
Q Consensus 665 ~v~~~P~~p~~~~~~~-~~~~si~lsW~~p~~~~~~~~~~y~v~~~~~-~--~~~w-~~~~---~~~~~~~~i~~L~-p~ 735 (2245)
.|..+|.+|. +.+.. ....++.++|.++. +++ ....|.+.|+.. . ...| ..+. .....++.+..+. ++
T Consensus 90 ~V~~pP~~P~-l~c~~~~~~~~~~c~W~~~~-~~~-~~~~y~l~~~~~~~~~~~~~~~~c~~~~~~~~~~c~i~~~~~~~ 166 (325)
T 1n26_A 90 LVDVPPEEPQ-LSCFRKSPLSNVVCEWGPRS-TPS-LTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAVPEGDS 166 (325)
T ss_dssp EECCCCCCCC-CEEEBSSTTSCEEEEECCSS-CCC-TTCEEEEEEEEESSSSCEEEEEEEEEETTTTEEEEEECCCTTCC
T ss_pred EeccCCCCCc-eeEEeecCCCcEEEEECCCC-CCC-CCceEEEEEEEccCCCCCcccccCCCCCCCCCEEEEECCCcccC
Confidence 9999999998 77653 34779999999543 444 457899988753 2 1222 2322 1234577888876 88
Q ss_pred CEEEEEEEEEecccCCCCCCCCccEEecCccccccccccccccCCCceeecccccccccCCceEEEEeeeccCccccccc
Q psy7042 736 HQYEFRVYAENVYGRSDPSTTSDLITTKDTFKKQIKKRQYDFDETGKKIRGKADEKVSDYDQYVFDIYSKYVPQPVDIKT 815 (2245)
Q Consensus 736 t~y~~~v~a~n~~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (2245)
+.|.|+|.|.|..|.+.. ....+ ..
T Consensus 167 ~~Y~f~v~A~N~~G~~~s-~~~~~-~~----------------------------------------------------- 191 (325)
T 1n26_A 167 SFYIVSMCVASSVGSKFS-KTQTF-QG----------------------------------------------------- 191 (325)
T ss_dssp CEEEEEEEEEETTEEEEC-CCEEE-ET-----------------------------------------------------
T ss_pred cEEEEEEEEEcCCCCccc-CcEEE-ee-----------------------------------------------------
Confidence 999999999999996521 10000 00
Q ss_pred cceecccccccccccCceeEEEEeeecccCCeeEEEeeccCCchhhhhhheeeeeeeccCCCceEeecccccCCcceEEE
Q psy7042 816 SSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLI 895 (2245)
Q Consensus 816 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 895 (2245)
T Consensus 192 -------------------------------------------------------------------------------- 191 (325)
T 1n26_A 192 -------------------------------------------------------------------------------- 191 (325)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEecCCCCCcccEEeeee--CceEEEEecCCCCC-CCCccceEEEeeeecCCCceEEecceeeeceEEEecCCCCceee
Q psy7042 896 FEVLDRPHPPENLHADEFA--GDSLTLYWTPPRDN-GGSEITNYVVEKKDYNSTVWTKVSSYVTTPFVRVRNLAIGSTYE 972 (2245)
Q Consensus 896 ~~~~~~P~~p~~l~~~~~~--~~~~~l~W~~p~~~-~g~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~ 972 (2245)
.....|.||.++.+.... .+++.|+|++|... .+..+.+|+|+|+..+...|..+........+.|.+|.|++.|.
T Consensus 192 -~~~v~P~pP~~l~v~~~~~~~~sv~lsW~~p~~~~~~~~~~~Y~V~yr~~~~~~W~~~~~~~~~~~~~l~~L~p~t~Y~ 270 (325)
T 1n26_A 192 -CGILQPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHV 270 (325)
T ss_dssp -TTCBCCCCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCCEEEECGGGCSEEEESSCCTTCCEE
T ss_pred -ccccCCCCCcceEEEEecCCCCEEEEEECCCCccCCCcEeEEEEEEEEeCCCCCCEEEcccCCceEEEEeCCCCCCeEE
Confidence 001368899999888764 36899999998653 34478999999999888889877665566789999999999999
Q ss_pred EEEEEEeccccCCCccccCcccccC
Q psy7042 973 FRVMAENQYGLSKPALTIDPIKAKH 997 (2245)
Q Consensus 973 ~~v~a~n~~g~~~~s~~~~~~~~~t 997 (2245)
|+|+|.|..|.|.+|..+..+..++
T Consensus 271 ~rVrA~n~~g~G~~S~wS~~~~~~~ 295 (325)
T 1n26_A 271 VQLRAQEEFGQGEWSEWSPEAMGTP 295 (325)
T ss_dssp EEEEEEETTTBSCCCCCCCCEEECC
T ss_pred EEEEEecCCCCCCCcCCCCccceec
Confidence 9999999999999998887766554
No 136
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.84 E-value=1e-20 Score=211.10 Aligned_cols=172 Identities=20% Similarity=0.206 Sum_probs=140.2
Q ss_pred CCCceecCCcceEEeCCCeEEEEEEEeeecCCc-eEEEECCeeccCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEEc
Q psy7042 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPK-CRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYN 167 (2245)
Q Consensus 89 ~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~-i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 167 (2245)
.+|.|...|....+.+|+.++|.|.+.+.|.+. |.|+|+|..+.... ..|.|.+++.+|+|.|+|.|.|
T Consensus 6 p~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~~~----------~~L~i~~v~~~D~G~Y~C~a~n 75 (204)
T 3sgj_C 6 PKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQA----------SSYFIDAATVDDSGEYRCQTQL 75 (204)
T ss_dssp CBCEEEEESCCSEEETTCCEEEEEECCSSSSCCCEEEEETTEEESCCS----------SEEEESSCCGGGCEEEEEEETT
T ss_pred CCCeEEEcCCCeEEECCCCEEEEEcCCCCCCCcEEEEEECCEEcccCc----------cEEEEecccccCCEEEEEEeCC
Confidence 578888888888999999999999999988776 99999999887543 2599999999999999999998
Q ss_pred CcccceeEEEEEecCCCeeecCCCceEEcCCCeEEEEEEEecC-CCceEEEeeCceeeecCCceEEEEeCCeEEEEEccc
Q psy7042 168 SVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGD-QPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEI 246 (2245)
Q Consensus 168 ~~g~~~~~~~l~V~~~P~~~~~~~~~~v~~G~~~~l~C~~~g~-p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~ 246 (2245)
. ..+..+.|.|..+|.+...+. ..+.+|+.++|.|.+.+. |.+.|.|+|||..+.... ....|.|.++
T Consensus 76 ~--~~s~~~~l~V~~~p~~~~~~~-~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~~--------~~~~L~i~~v 144 (204)
T 3sgj_C 76 S--TLSDPVQLEVHIGWLLLQAPR-WVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKYFH--------HNSDFYIPKA 144 (204)
T ss_dssp S--BCCCCEEEEEECSSEEEECSC-SEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEEEEE--------ECCCEEESSC
T ss_pred C--cccccEEEEEecCceEecCCc-eeEeCCCcEEEEEEecCCCCCceEEEEECCcEeeccc--------CCceEEECcC
Confidence 4 455577899998888776665 678899999999999655 678999999999874311 1236999999
Q ss_pred CccCceeEEEEEEc-CCcceEEEEEEEEecCCCCCC
Q psy7042 247 RKEDAGDYTVNLSN-SSGSVSGTFTINITGLPGPPI 281 (2245)
Q Consensus 247 ~~~d~G~Y~C~a~n-~~g~~~~~~~l~V~~~p~~~~ 281 (2245)
..+|+|.|+|.|.| ..+..+..+.|.|.++|..|.
T Consensus 145 ~~~D~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~P~ 180 (204)
T 3sgj_C 145 TLKDSGSYFCRGLVGSKNVSSETVQITITQGLAVST 180 (204)
T ss_dssp CGGGCEEEEEEEEETTEEEECCCEEEEEEC------
T ss_pred CcccCEEEEEEEEeCCCceecCcEEEEEeCcCCCCc
Confidence 99999999999999 446677889999998876554
No 137
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.84 E-value=6.9e-21 Score=223.34 Aligned_cols=202 Identities=15% Similarity=0.193 Sum_probs=132.9
Q ss_pred CccCCcEEEEEEEEcCCCCCCCCCccccEEEeeccCCCCCceecCCcceEEeCCCeEEEEEEEeeec-----CCceEEEE
Q psy7042 52 LVEGNDYEFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTP-----VPKCRWLR 126 (2245)
Q Consensus 52 ~~~~d~G~Y~C~a~n~~g~~~~~~~~~~~~v~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p-----~~~i~W~~ 126 (2245)
++++|+|.|+|.|. |.......+ .+ ..+|.+...|..+.+.+|++++|.|.+.+.| .+.|.|+|
T Consensus 11 v~~~dsg~Y~C~a~---g~~~~~~~~---~~-----~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k 79 (254)
T 2c1o_A 11 VRPGTSVKLSCKAS---GYSFTNYWM---NW-----LRELVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLL 79 (254)
T ss_dssp --------------------------------------CCCEEEECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEE
T ss_pred ecCCccEEEEEcCc---hhhhhhhhh---he-----eeceeEEeCCceEEecCCCcEEEEeeccCcccccCCCCceEEEE
Confidence 78999999999997 433322111 11 1377888888999999999999999999887 48999998
Q ss_pred C--Ceec------------cCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEEcCccccee-EEEEEecC---CCeeec
Q psy7042 127 N--GREI------------SSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHT-SSRVKIGT---PPRIDR 188 (2245)
Q Consensus 127 ~--g~~l------------~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~-~~~l~V~~---~P~~~~ 188 (2245)
+ |..+ ....|+.+...++..+|.|.+++.+|+|.|+|.|.|..+.... .+.|.|.. +|.+..
T Consensus 80 ~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~ 159 (254)
T 2c1o_A 80 QRPGQSPKRLIYLVSKLDSGDPDRFTGSGSGTDFTLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKRADAAPTVSI 159 (254)
T ss_dssp ECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSSSCEEBCCEEEEECCCCBCCEEEE
T ss_pred eCCCCCceEEEEeccccCCCccceEEEecCCCEEEEEECcCCcccCEEEEEEEEcCcceEecCCEEEEECCCCCCCeeEe
Confidence 4 3322 1235788877777888999999999999999999998664332 34677764 677766
Q ss_pred CCCceEEcCCCeEEEEEEEec-CCC-ceEEEeeCceeeecCCc--eEEEEeC-----CeEEEEEcccCccCceeEEEEEE
Q psy7042 189 MPNALYIPEGDNTKVKIFYAG-DQP-MEVSLTKNGRVVQSDDR--FKFTVLD-----DYIIIFIKEIRKEDAGDYTVNLS 259 (2245)
Q Consensus 189 ~~~~~~v~~G~~~~l~C~~~g-~p~-~~i~W~~~g~~l~~~~~--~~~~~~~-----~~~~L~i~~~~~~d~G~Y~C~a~ 259 (2245)
.+......+|+.++|.|.+.| .|+ +.|+|+|||..+..... ....... ....|.|.++..+|+|.|+|.|.
T Consensus 160 ~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~ 239 (254)
T 2c1o_A 160 FPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEAT 239 (254)
T ss_dssp ECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEESSSEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred ecCChhhccCCcEEEEEEEecccCCCcEEEEEECCCcccCcceeccccccCCCCcEEEEEEEEeccccccCCCeEEEEEE
Confidence 554444456889999999988 444 46999999998865511 1111111 13579999999999999999999
Q ss_pred cCCcc
Q psy7042 260 NSSGS 264 (2245)
Q Consensus 260 n~~g~ 264 (2245)
|....
T Consensus 240 n~~~~ 244 (254)
T 2c1o_A 240 HKTST 244 (254)
T ss_dssp CTTCS
T ss_pred cCCCC
Confidence 98754
No 138
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=99.84 E-value=3.9e-21 Score=264.19 Aligned_cols=289 Identities=18% Similarity=0.236 Sum_probs=212.7
Q ss_pred CCCCCCeeeeecCCcEEEEeeCCCCCCCcccccEEEEeeeCC--------------CCCeEEEce--e---------eee
Q psy7042 671 DPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHP--------------MSSWIRVGN--T---------RFT 725 (2245)
Q Consensus 671 ~~p~~~~~~~~~~~si~lsW~~p~~~~~~~~~~y~v~~~~~~--------------~~~w~~~~~--~---------~~~ 725 (2245)
..|.++.+..++.+++.|+|.+|..+++..+.+|.|+|+..+ ...|..... . ...
T Consensus 470 ~~~~~l~v~~~s~~sv~LsW~~p~~~~~~~i~gY~V~y~~~~~~n~t~~~~~~~c~~~~w~~~~~~~~~~~~~~~~~~~~ 549 (897)
T 2dtg_E 470 NELLKFSYIRTSFDKILLRWEPYWPPDFRDLLGFMLFYKEAPYQNVTEFDGQDACGSNSWTVVDIDPPLRSNDPKSQNHP 549 (897)
T ss_dssp CCBCCCSEEEECSSCEEEECCCCCSSSCCCEEEECCCSSSCCTTTCCCCCCCCCSCCCCCCCCCSCCEEEECCCCSSSCC
T ss_pred cceeEEEEEEEecCeEEEEecCCCCCCCceeeeEEEEEEeCCCCCcccccCccccCCCcceEEecCCCcccccccccccc
Confidence 446688899999999999999887667778999999998752 346764331 1 146
Q ss_pred eEEEecCCCCCEEEEEEEE-EecccC----CCCCCCCccEEecCccccccccccccccCCCceeecccccccccCCceEE
Q psy7042 726 TMAITGLSPGHQYEFRVYA-ENVYGR----SDPSTTSDLITTKDTFKKQIKKRQYDFDETGKKIRGKADEKVSDYDQYVF 800 (2245)
Q Consensus 726 ~~~i~~L~p~t~y~~~v~a-~n~~G~----~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 800 (2245)
.+.+.+|+|++.|.|+|.| .|..|. +.+|....+.
T Consensus 550 ~~~l~~L~P~T~Y~~~V~A~~n~~G~~~~~~~~S~~v~~~---------------------------------------- 589 (897)
T 2dtg_E 550 GWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQ---------------------------------------- 589 (897)
T ss_dssp EEEECSCCSSCBCCBEEEECCCCCSSCCCCCCBCCCBCCB----------------------------------------
T ss_pred ceEeCCCCCCcEEEEEEEEEEeccCCccccCCccceEEEE----------------------------------------
Confidence 7999999999999999999 999997 3333321111
Q ss_pred EEeeeccCccccccccceecccccccccccCceeEEEEeeecccCCeeEEEeeccCCchhhhhhheeeeeeeccCCCceE
Q psy7042 801 DIYSKYVPQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLI 880 (2245)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (2245)
T Consensus 590 -------------------------------------------------------------------------------- 589 (897)
T 2dtg_E 590 -------------------------------------------------------------------------------- 589 (897)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eecccccCCcceEEEEEEecCCCCCcccEEeeeeCceEEEEecCCCCCCCCccceEEEeeeecCCC--------------
Q psy7042 881 NLHDAFEDDDEMVLIFEVLDRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNST-------------- 946 (2245)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~~P~~p~~l~~~~~~~~~~~l~W~~p~~~~g~~i~~y~i~~~~~~~~-------------- 946 (2245)
+..++|++|.++.+...+++++.|+|++|..++| .+.+|.|+|+.....
T Consensus 590 ----------------T~~~~Ps~P~~l~~~~~s~tsI~LsW~pP~~~nG-~I~~Y~V~~~~~~~~~~~~~~~~~~~~~l 652 (897)
T 2dtg_E 590 ----------------TDATNPSVPLDPISVSNSSSQIILKWKPPSDPNG-NITHYLVFWERQAEDSELFELDYCLKGLK 652 (897)
T ss_dssp ----------------CCCCCCCCCEEEEEEECSSSCEEEEEECCCCSSS-SCSEEECCEEEECCCCSCTTCSSSCSCCC
T ss_pred ----------------CCCCCCcCCcceEEEeCCCCEEEEEEeCCCCCCC-CeeEEEEEEEECCCCccceecccccCCCc
Confidence 1125889999999999999999999999987777 799999988753220
Q ss_pred ---------------------------------------------------ceEEe------------------------
Q psy7042 947 ---------------------------------------------------VWTKV------------------------ 951 (2245)
Q Consensus 947 ---------------------------------------------------~~~~~------------------------ 951 (2245)
.|+..
T Consensus 653 ~p~t~Y~~~V~A~~~~~~s~~~~~~~~~~~~~~p~~p~~~~~~~~~~s~~~~W~~~~~n~v~~~~p~~~r~~l~~~~n~t 732 (897)
T 2dtg_E 653 LPSRTWSPPFESEDSQKHNQSEYEDSAGECCSCPKTDSQILKELEESSFRKTFEDYLHNVVFVPRPSRKRRSLGDVGNAG 732 (897)
T ss_dssp CCC-----------------------------------------------------------------------------
T ss_pred CCccccceeeecccccCcccccccccCCCccCCcCcccchhhhhhhhheeeeEEEccCceEEccCCCccccccccccccc
Confidence 01100
Q ss_pred --------cceeeeceEEEecCCCCceeeEEEEEEeccccCCCccccCcccccCCC--CCCCCCCCCeeEeecCCeEEEE
Q psy7042 952 --------SSYVTTPFVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPF--DVPGAPGAPKGVDSTEDSISLV 1021 (2245)
Q Consensus 952 --------~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~s~~~~~~~~~t~~--~~p~~p~~~~~~~~~~~~v~l~ 1021 (2245)
......+.++|.+|.|++.|.|+|.|.|..|.++....+..+.+.|.+ .+|.+|..+++...+.++|.|+
T Consensus 733 ~~~~~~~~~~~~~~t~~~i~gL~p~t~Y~~~V~A~n~~G~g~~~s~s~~v~~~T~~~~~~p~~P~~l~~~~~~~~sv~Ls 812 (897)
T 2dtg_E 733 NNEEHRPFEKVVNKESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTMPEAKADDIVGPVTHEIFENNVVHLM 812 (897)
T ss_dssp ---CCSCSCEECSCSEEEECSSCSSCEEEECCEEESCSSSSCCBCCCCCEEEECCCCCCCCCCCCCCCCCSSSSSCCCCC
T ss_pred CccccceEEecCCceEEEECCCCCCcEEEEEEEEEeCCCCCCCCCCCceeEEeccCccCCCCCCcceEEEeCCCCEEEEE
Confidence 001133789999999999999999999999987752223455666655 5678899999988999999999
Q ss_pred ecCCCCCCCCccceEEEEEEecCCccceeccccccCCcceeEEEEeecccccCCccCchhhhhhhhhcccccccccccCC
Q psy7042 1022 WSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIEN 1101 (2245)
Q Consensus 1022 W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~ 1101 (2245)
|++|..++|. |.+|.|+|+..++..+..+........ .+.++|.+|.|+
T Consensus 813 W~~P~~~nG~-I~~Y~V~y~~~~~~~~~~~~~~~~~~~------------------------------~~~~~l~~L~pg 861 (897)
T 2dtg_E 813 WQEPKEPNGL-IVLYEVSYRRYGDEELHLCDTRKHFAL------------------------------ERGCRLRGLSPG 861 (897)
T ss_dssp CCCCCSCSSC-EEEECCCCBSSSBCCCCCCCCSSSCCC------------------------------TTCCCCCSCCSS
T ss_pred ECCCCCCCCC-EEEEEEEEEECCCcceEEEEeeeeecc------------------------------cCcEEECCCCCC
Confidence 9999877664 999999998765422212111000000 112369999999
Q ss_pred cEEEEEEEEEecCCCCCCCCCCcceee
Q psy7042 1102 HEYEFRVCAVNAAGQGPWSSSSDIIMC 1128 (2245)
Q Consensus 1102 ~~Y~~~v~A~n~~G~~~~s~~~~~~~~ 1128 (2245)
.|.|+|+|.|.+|.|++|....+.+.
T Consensus 862 -tY~~rV~A~n~~G~G~~S~~v~~~T~ 887 (897)
T 2dtg_E 862 -NYSVRIRATSLAGNGSWTEPTYFYVT 887 (897)
T ss_dssp -EECCCCCEEETTBCCCCCCCCEECCC
T ss_pred -cEEEEEEEEeCCcccCCCCCEEEEeC
Confidence 69999999999999998877665553
No 139
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.84 E-value=4.5e-20 Score=205.71 Aligned_cols=179 Identities=20% Similarity=0.269 Sum_probs=143.0
Q ss_pred CCceeccCCceEEcCCCeEEEEEEec-CcCCCeEEEeeCCEeccCCceEEEEecC--cEEEEEEeeeccCCCeEEEEEEe
Q psy7042 1697 KPDFIVPLKDLVVPLGKLLTLQCEAT-GTPVPKCRWLRNGREISSGARYRVETAG--GVFRLHFNEVTDVDNGDYTCEAY 1773 (2245)
Q Consensus 1697 ~p~~~~~~~~~~~~~G~~v~L~C~~~-~~p~~~v~W~~~~~~l~~~~~~~~~~~~--~~~~L~i~~v~~~d~G~Y~C~~~ 1773 (2245)
.|.|..+. +..+.+|+.+.|.|.+. +.|.|.+.|+|||.++..+.++.+..++ +..+|.|.+++.+|+|.|+|.|.
T Consensus 3 ~p~~~~~~-~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~ 81 (207)
T 3rbs_A 3 DPFTKSEL-AVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQ 81 (207)
T ss_dssp ---CCEEE-EEEECGGGCEEEEEECSCCCSCCEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEE
T ss_pred CCeeecCC-ceEEEeCCeEEEEEEEecCCCCCEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEE
Confidence 46666554 57899999999999996 4799999999999999888887776654 77789999999999999999999
Q ss_pred cCceeeEEEEEEEec---------------------CCCccccCCCceEEcCCCeEEEEEEEecc-CCcEEEEEECCEEe
Q psy7042 1774 NSVGFAHTSSRVKIG---------------------TPPRIDRMPNALYIPEGDNTKVKIFYAGD-QPMEVSLTKNGRVV 1831 (2245)
Q Consensus 1774 n~~g~~~~~~~l~V~---------------------~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~~v~W~~~g~~l 1831 (2245)
|. .......+.+. .+|.+.... ...+.+|+.+.|.|.+.|. |.|.|+|+|||+.+
T Consensus 82 Ng--~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~-~~~v~~g~~v~l~C~v~g~~P~p~i~W~k~g~~l 158 (207)
T 3rbs_A 82 DG--KATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYL-SWEVTGECNVLLKCKVANIKKETHIVWYKDEREI 158 (207)
T ss_dssp ET--TEEEEEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEE-EEEEETTTEEEEEEEEESCCTTCEEEEEETTEEE
T ss_pred CC--CeEEEEEEEEEccchhhhcccccccccccccCCCCceEecC-CcEEcCCCcEEEEEEEeCCCCCCEEEEEECCEEC
Confidence 94 33343333211 256665444 4778899999999999998 99999999999999
Q ss_pred ecCCceEEEEcCCeEEEEEcccCcccceEEEEEEEcCCeeeEEEEEEEEe
Q psy7042 1832 QSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINIT 1881 (2245)
Q Consensus 1832 ~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 1881 (2245)
..+.++ ........|.|.++..+|+|.|+|.|.|..|..+.++.|.+.
T Consensus 159 ~~~~~~--~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~~~ 206 (207)
T 3rbs_A 159 SVDEKH--DFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDE 206 (207)
T ss_dssp CCCCCC--CCSSEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEECCC
T ss_pred CCCCce--EcCCCEEEEEECCCCcccCEEEEEEEEcCCCEEEEEEEEecC
Confidence 766543 223444679999999999999999999999999999888653
No 140
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.84 E-value=1.4e-19 Score=205.16 Aligned_cols=189 Identities=25% Similarity=0.409 Sum_probs=158.7
Q ss_pred CCCCceeccCCceEEcCCCeEEEEEEecCcCCCeEEEeeCCEecc-CCceEEEEe-cCcEEEEEEeeecc-CCCeEEEEE
Q psy7042 1695 GEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREIS-SGARYRVET-AGGVFRLHFNEVTD-VDNGDYTCE 1771 (2245)
Q Consensus 1695 ~~~p~~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~~~~l~-~~~~~~~~~-~~~~~~L~i~~v~~-~d~G~Y~C~ 1771 (2245)
..+|.|...+.+..+.+|++++|.|.+.|.|.+.+.|++++..+. ...++.+.. .++...|.|.+++. +|+|.|+|.
T Consensus 4 ~~pP~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~ 83 (212)
T 2yd1_A 4 AHPPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECV 83 (212)
T ss_dssp -CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEE
T ss_pred CCCCEEEcCCCceEEecCCEEEEEEEEccCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEEE
Confidence 468899999999999999999999999999999999999999986 456666543 45668899999999 999999999
Q ss_pred EecCcee-eEEEEEEEecCC-------CccccCCCceEEcCCCeEEEEEEEeccCCcEEEEEECCEEeecC-CceEEEEc
Q psy7042 1772 AYNSVGF-AHTSSRVKIGTP-------PRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSD-DRFKFTVL 1842 (2245)
Q Consensus 1772 ~~n~~g~-~~~~~~l~V~~~-------p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~v~W~~~g~~l~~~-~~~~~~~~ 1842 (2245)
+.|..|. ....+.|.|..+ |.+...+....+.+|+.+.|.|.+.|.|.+.+.|++++..+... .++.+ .
T Consensus 84 ~~n~~g~~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~--~ 161 (212)
T 2yd1_A 84 AENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRYSL--K 161 (212)
T ss_dssp EECSSSCEEEEEEEEEEECTTCSCTTCCEEEECCCCEEEETTCCEEECCEEECSSCCEEEEEETTEECCTTSTTEEE--E
T ss_pred EEeCCCCeEEeeEEEEEecccCCCCCCCeeEeCCCceEeecCCeEEEEEEeccCCCCeEEEEECCeEcccCCCeEEc--c
Confidence 9999988 777888988765 67777777888999999999999999999999999999998753 33322 2
Q ss_pred CCeEEEEEcccCcccceEEEEEEEcCCeeeEEE-EEEEEeCCCCCC
Q psy7042 1843 DDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGT-FTINITGLPGPP 1887 (2245)
Q Consensus 1843 ~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~-~~l~v~~~p~~~ 1887 (2245)
+. .|.|.++..+|+|.|+|.|.|..|..... +.|.|...+..+
T Consensus 162 ~~--~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V~~~~~~~ 205 (212)
T 2yd1_A 162 DG--FLQIENSREEDQGKYECVAENSMGTEHSKATNLYVKVRRVGT 205 (212)
T ss_dssp TT--EEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC---C-
T ss_pred CC--eEEEccCChhhCEEEEEEeecCCCceeEEEEEEEEEeccccc
Confidence 22 79999999999999999999999988765 889998765443
No 141
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.84 E-value=1.4e-20 Score=214.23 Aligned_cols=191 Identities=22% Similarity=0.379 Sum_probs=150.7
Q ss_pred CCCCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECCeeccCCC-----eEEEEEcCcEE--EEEEeeeccCCCeE
Q psy7042 88 GEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGA-----RYRVETAGGVF--RLHFNEVTDVDNGD 160 (2245)
Q Consensus 88 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~~-----~~~~~~~~~~~--~L~i~~~~~~d~G~ 160 (2245)
..+|.|...|.++.+.+|+.++|.|.+.|.|.+.+.|+|+|..+.... +......+... .|.|.+++.+|+|.
T Consensus 7 ~~pp~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 86 (212)
T 2v9r_A 7 DFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGV 86 (212)
T ss_dssp CEEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCEE
T ss_pred cCCcceecCCCceEEeCCCcEEEEEEcCCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCeE
Confidence 468999999999999999999999999999999999999999887432 12222333322 24456779999999
Q ss_pred EEEEEEcCcccc-eeEEEEEecC-CCeeecCCCceEEcCCCeEEEEEEE-ecCCCceEEEeeCceeeecCCceEEEEeCC
Q psy7042 161 YTCEAYNSVGFA-HTSSRVKIGT-PPRIDRMPNALYIPEGDNTKVKIFY-AGDQPMEVSLTKNGRVVQSDDRFKFTVLDD 237 (2245)
Q Consensus 161 Y~C~a~n~~g~~-~~~~~l~V~~-~P~~~~~~~~~~v~~G~~~~l~C~~-~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~ 237 (2245)
|+|.|.|..|.. +..+.|.|.. +|.+...+....+.+|+.+.|.|.+ .|.|.+.+.|+|+|..+.......... +.
T Consensus 87 Y~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~~~~~~~~-~~ 165 (212)
T 2v9r_A 87 YVCVARNYLGEAVSHDASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIR-GG 165 (212)
T ss_dssp EEEEEEETTEEEECCCEEEEECEECSSCSBCCCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECTTSTTEEEE-TT
T ss_pred EEEEEECCCCceeecceEEEEEeccccceeCCCceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCCcceEEcc-CC
Confidence 999999998876 4477788876 4556677888899999999999998 899999999999999997654432222 22
Q ss_pred eEEEEEcccCccCceeEEEEEEcCCcceEE-EEEEEEecCCCCCC
Q psy7042 238 YIIIFIKEIRKEDAGDYTVNLSNSSGSVSG-TFTINITGLPGPPI 281 (2245)
Q Consensus 238 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~-~~~l~V~~~p~~~~ 281 (2245)
.|.|.++..+|+|.|+|.|.|..|.... .+.|.|.++|....
T Consensus 166 --~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~V~~~P~~~~ 208 (212)
T 2v9r_A 166 --KLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVK 208 (212)
T ss_dssp --EEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC------
T ss_pred --eEEEeeCCHhhCeeEEEEEecccCceecceEEEEEEeCchHhh
Confidence 7999999999999999999999998655 58999998876543
No 142
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.84 E-value=1.7e-19 Score=200.49 Aligned_cols=179 Identities=22% Similarity=0.343 Sum_probs=153.6
Q ss_pred CCCceeccCCceEEcC-CCeEEEEEEecCcCC--CeEEEeeCCEeccCCceEEEEecCcEEEEEEeeeccCCCeEEEEEE
Q psy7042 1696 EKPDFIVPLKDLVVPL-GKLLTLQCEATGTPV--PKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEA 1772 (2245)
Q Consensus 1696 ~~p~~~~~~~~~~~~~-G~~v~L~C~~~~~p~--~~v~W~~~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~ 1772 (2245)
.+|.+..++ ...+.+ |+++.|.|.+.+.|. +.+.|+|++..+....... ....|.|.+++.+|+|.|+|.+
T Consensus 2 ~~P~i~~~~-~~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~-----~~~~L~i~~~~~~d~G~Y~C~~ 75 (190)
T 2wv3_A 2 NEPRIVTSE-EVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNA-----SNMEYRINKPRAEDSGEYHCVY 75 (190)
T ss_dssp -CCEEEECC-CEECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCCBCC-----SEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCcccccc-eEEEccCCceEEEEEEeccCCCCceEEEEEECCEECcccceEe-----ccEEEEEecCCcccCEEEEEEE
Confidence 467776644 455666 999999999988876 7899999999987654322 4467999999999999999999
Q ss_pred ecCceeeEEEEEEEecCCCccccCCCceEEcCCCeEEEEEEEeccCCcEEEEEE--CCEEee---cCCceEEEEcCCeEE
Q psy7042 1773 YNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTK--NGRVVQ---SDDRFKFTVLDDYII 1847 (2245)
Q Consensus 1773 ~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~v~W~~--~g~~l~---~~~~~~~~~~~~~~~ 1847 (2245)
.|. +.....+.|.|..+|.+...+....+.+|+.+.|.|.+.|.|.+.+.|++ +|..+. ...++.+...+....
T Consensus 76 ~n~-~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 154 (190)
T 2wv3_A 76 HFV-SAPKANATIEVKAAPDITGHKRSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFIINKENYTE 154 (190)
T ss_dssp EET-TEEEEEEEEEEECCCEEEEECSEEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEECCCTTSCEEEEECSSEEE
T ss_pred EeC-CcccccEEEEEecCCcccccCCcceeeCCCcEEEEEEeCccCCCceEEEEcCCCceeeeecCCCeEEEecCCCeeE
Confidence 999 88888999999999999888888889999999999999999999999999 888775 456666666666779
Q ss_pred EEEcccC-cccceEEEEEEEcCCeeeEEEEEEEEe
Q psy7042 1848 IFIKEIR-KEDAGDYTVNLSNSSGSVSGTFTINIT 1881 (2245)
Q Consensus 1848 l~i~~~~-~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 1881 (2245)
|.|.++. .+|+|.|+|.|.|..|.....+.|.|.
T Consensus 155 L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 155 LNIVNLQITEDPGEYECNATNSIGSASVSTVLRVR 189 (190)
T ss_dssp EEECSCCTTTSCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred EEEEeccccCCCEEEEEEEEecCCcceeEEEEEEE
Confidence 9999999 799999999999999999999888875
No 143
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.84 E-value=1.9e-19 Score=203.94 Aligned_cols=189 Identities=24% Similarity=0.331 Sum_probs=155.7
Q ss_pred CCCceeccCCceEEcCCCeEEEEEEecCcCCCeEEEeeCCEeccCCceEEEEe-cCcEEEEEEeee-ccCCCeEEEEEEe
Q psy7042 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVET-AGGVFRLHFNEV-TDVDNGDYTCEAY 1773 (2245)
Q Consensus 1696 ~~p~~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~~~~l~~~~~~~~~~-~~~~~~L~i~~v-~~~d~G~Y~C~~~ 1773 (2245)
.+|.|...+.+..+.+|+++.|.|.+.|.|.+.+.|++++..+.......... .+....|.|.++ +.+|+|.|+|.+.
T Consensus 5 ~~P~~~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~ 84 (212)
T 2yd6_A 5 TPPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVAS 84 (212)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEEEE
T ss_pred CCCeEEeCcceeEEecCCeEEEEEEEeeCCCCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEEEEE
Confidence 57888888889999999999999999999999999999999987654433332 345677999999 5999999999999
Q ss_pred cCceeeEEEEEEEecCC-------CccccCCCceEEcCCCeEEEEEEEeccCCcEEEEEECCEEeecC---CceEEEEcC
Q psy7042 1774 NSVGFAHTSSRVKIGTP-------PRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSD---DRFKFTVLD 1843 (2245)
Q Consensus 1774 n~~g~~~~~~~l~V~~~-------p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~v~W~~~g~~l~~~---~~~~~~~~~ 1843 (2245)
|..|.....+.|.|..+ |.+...+....+.+|+.+.|.|.+.|.|.+.+.|+++|..+... .++......
T Consensus 85 n~~g~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~ 164 (212)
T 2yd6_A 85 NNVGEISVSTRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQLRSE 164 (212)
T ss_dssp ETTEEEEEEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEEC------CCEEEEEET
T ss_pred cCCCcEEEEEEEEEeccCccCCCcceeecCCcceeEecCCCEEEEEEecCCCCCeEEEEECCccccCcCCCceEEEEecC
Confidence 99999888889998654 56666777788999999999999999999999999999988654 444444455
Q ss_pred CeEEEEEcccCcccceEEEEEEEcCCeeeEE-EEEEEEeCCC
Q psy7042 1844 DYIIIFIKEIRKEDAGDYTVNLSNSSGSVSG-TFTINITGLP 1884 (2245)
Q Consensus 1844 ~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~-~~~l~v~~~p 1884 (2245)
....|.|.++..+|+|.|+|.|.|..|.... .+.|.|...+
T Consensus 165 ~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~~a~l~~~~~~ 206 (212)
T 2yd6_A 165 SIGALQIEQSEESDQGKYECVATNSAGTRYSAPANLYVRGTK 206 (212)
T ss_dssp TEEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred CeEEEEEcCCCcccCEEEEEEEECCCCccccccccEEEEecc
Confidence 6789999999999999999999999997654 4667766443
No 144
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.83 E-value=1.2e-20 Score=215.51 Aligned_cols=185 Identities=23% Similarity=0.379 Sum_probs=150.4
Q ss_pred CCCCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECCeeccCCC--eEEEEEcCcE--EEEEEeeeccCCCeEEEE
Q psy7042 88 GEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGA--RYRVETAGGV--FRLHFNEVTDVDNGDYTC 163 (2245)
Q Consensus 88 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~~--~~~~~~~~~~--~~L~i~~~~~~d~G~Y~C 163 (2245)
..+|.|+..|..+.+.+|+.++|.|.+.|.|.+.|.|+|+|..+.... ...+...++. ..|.|.+++.+|+|.|+|
T Consensus 7 ~~~P~i~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C 86 (217)
T 2vr9_A 7 YQSPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYWC 86 (217)
T ss_dssp CCCCEEEECCCCEEECTTSCEEECCEEECSSCCEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEEEE
T ss_pred cCCCEEecCCCceEEeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceEEE
Confidence 479999999999999999999999999999999999999999987642 2222223332 234788999999999999
Q ss_pred EEEcCccccee-EEEEEecC-CCeeecCCCceEEcCCCeEEEEEEE-ecCCCceEEEeeCceeeecC--------CceEE
Q psy7042 164 EAYNSVGFAHT-SSRVKIGT-PPRIDRMPNALYIPEGDNTKVKIFY-AGDQPMEVSLTKNGRVVQSD--------DRFKF 232 (2245)
Q Consensus 164 ~a~n~~g~~~~-~~~l~V~~-~P~~~~~~~~~~v~~G~~~~l~C~~-~g~p~~~i~W~~~g~~l~~~--------~~~~~ 232 (2245)
.|.|..|...+ .+.|.|.. +|.+...+....+.+|+.+.|.|.+ .|.|.+.+.|+|+|..+... .++.+
T Consensus 87 ~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~ 166 (217)
T 2vr9_A 87 VAKNRVGQAVSRHASLQIAVLRDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASSRVRI 166 (217)
T ss_dssp EEEETTEEEECCCEEEEECEECCSCSBCCCCEEECTTSCEEECCBCCCEESCCEEEEEETTEEECCCCCC---CCCSEEE
T ss_pred EEecCCCccccccceEEEEEeCCCcEECCCccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCcccccccccCCcEEe
Confidence 99999887643 67787776 6677778888999999999999998 89999999999999998743 22222
Q ss_pred EEeCCeEEEEEcccCccCceeEEEEEEcCCcceEEEEEEEEec
Q psy7042 233 TVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITG 275 (2245)
Q Consensus 233 ~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 275 (2245)
. ....|.|.++..+|+|.|+|.|.|..|....+..+.+..
T Consensus 167 ~---~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~~lv~~ 206 (217)
T 2vr9_A 167 V---DGGNLLISNVEPIDEGNYKCIAQNLVGTRESSYAKLIVQ 206 (217)
T ss_dssp E---TTTEEEESSCCSTTCEEEEEEEEETTEEEECCCEEEEEC
T ss_pred c---CCCcEEEeeCCHHHCeEEEEEEEcccceeccccEEEEEE
Confidence 2 122699999999999999999999999987776665554
No 145
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.83 E-value=3e-20 Score=214.99 Aligned_cols=191 Identities=22% Similarity=0.380 Sum_probs=153.7
Q ss_pred CCCceecCC----cceEEeCCCeEEEEEEEeeecCCceEEEECCeeccCCCeE---EEEEcCcEEEEEEeeeccCCCeEE
Q psy7042 89 EKPDFIVPL----KDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARY---RVETAGGVFRLHFNEVTDVDNGDY 161 (2245)
Q Consensus 89 ~~P~~~~~~----~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~~~~---~~~~~~~~~~L~i~~~~~~d~G~Y 161 (2245)
.+|.|+..+ ....+.+|+.++|.|.+.|.|.+.|.|+|+|..+....++ ..... ...|.|.+++.+|+|.|
T Consensus 14 ~~P~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~--~~~L~i~~~~~~d~G~Y 91 (231)
T 3ojm_B 14 RAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQ--HWSLIMESVVPSDKGNY 91 (231)
T ss_dssp EEEEESCGGGGCCSCEEEETTSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGG--GTEEEECSCCGGGCEEE
T ss_pred cCCccccccccCceeEEEccCCCEEEEEecccCCCCeEEEEECCccccccccccceeeecC--cceEEEecCCcccCEEE
Confidence 478887766 7789999999999999999999999999999998765443 33322 23699999999999999
Q ss_pred EEEEEcCcccceeEEEEEecCC----Ceee-cCCCceEEcCCCeEEEEEEEecCCCceEEEee----CceeeecCCceEE
Q psy7042 162 TCEAYNSVGFAHTSSRVKIGTP----PRID-RMPNALYIPEGDNTKVKIFYAGDQPMEVSLTK----NGRVVQSDDRFKF 232 (2245)
Q Consensus 162 ~C~a~n~~g~~~~~~~l~V~~~----P~~~-~~~~~~~v~~G~~~~l~C~~~g~p~~~i~W~~----~g~~l~~~~~~~~ 232 (2245)
+|.|.|..|.....+.|.|..+ |.+. ..+....+.+|+.+.|.|.+.|.|.+.+.|++ +|..+........
T Consensus 92 ~C~~~n~~~~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~ 171 (231)
T 3ojm_B 92 TCVVENEYGSINHTYHLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYL 171 (231)
T ss_dssp EEEEEETTEEEEEEEEEEEECCCCCCCEECTTCSCCEEEETTCCEEEECCEECSSCCEEEEEEECCBTTBSBCTTSCBCE
T ss_pred EEEEecccCcccccEEEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCCccccCCCcceE
Confidence 9999999998888888888763 3333 34677889999999999999999999999999 8887765443221
Q ss_pred EE-------eCCeEEEEEcccCccCceeEEEEEEcCCcceEEEEEEEEecCCCCCC
Q psy7042 233 TV-------LDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPI 281 (2245)
Q Consensus 233 ~~-------~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~ 281 (2245)
.. ......|.|.++..+|+|.|+|.|.|..|..+.++.|.|..+|.+|.
T Consensus 172 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~p~ 227 (231)
T 3ojm_B 172 KVLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIGQANQSAWLTVLPKQQAPG 227 (231)
T ss_dssp EEEEECSTTCSCTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC----
T ss_pred eEecccccccCCccEEEEecCCHHHCeEEEEEEEeccceEeeEEEEEEecCCCCCc
Confidence 11 11224699999999999999999999999999999999999887764
No 146
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.83 E-value=5.1e-20 Score=209.45 Aligned_cols=172 Identities=23% Similarity=0.325 Sum_probs=147.4
Q ss_pred CCCCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECCeeccCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEEc
Q psy7042 88 GEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYN 167 (2245)
Q Consensus 88 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 167 (2245)
+..+.|+..|.++.+.+|+.++|.|.+.|.|.+.|.|+|++..+.... + ..|.|.+++.+|+|.|+|.|.|
T Consensus 16 ~~~~~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~-------~--~~L~i~~v~~~d~G~Y~C~~~n 86 (218)
T 3k0w_A 16 PRGSKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNGN-------T--SELIFNAVHVKDAGFYVCRVNN 86 (218)
T ss_dssp ---CCEEECCCCEEEETTSBEEEECEETTTTSSEEEEEETTEECTTCC-------S--SEEEETTCCGGGCEEEEEEEEC
T ss_pred CCCCEEEECCCCeEEeCCCcEEEEeeecCCCCCEEEEEECCEECCCCC-------C--CEEEEccCChhhCeEeEEEEEc
Confidence 568899999999999999999999999999999999999999987542 2 2599999999999999999999
Q ss_pred Ccccc-eeEEEEEecCC---------------CeeecCCCceEEcCCCeEEEEEEEecCCCceEEEeeCceeeecCCceE
Q psy7042 168 SVGFA-HTSSRVKIGTP---------------PRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFK 231 (2245)
Q Consensus 168 ~~g~~-~~~~~l~V~~~---------------P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~ 231 (2245)
..|.. +..+.|.|..+ |.+...+....+.+|+.+.|.|.+.|.|.+.|.|+|+|..+.....
T Consensus 87 ~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~~~~~~~~~~-- 164 (218)
T 3k0w_A 87 NFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHETK-- 164 (218)
T ss_dssp TTCCEECCCEEEEEECCCGGGCTTCCSBCCSSCEEEECCCCEEECTTCCEEEECEEEBSSCCEEEEEETTEECTTCCS--
T ss_pred CCCCceeeEEEEEEEccCcccccccccccCCCceEEECCCceeecCCCcEEEEEEecccCCCeEEEEECCEECCCCCC--
Confidence 98765 44678888765 6777888889999999999999999999999999999999865543
Q ss_pred EEEeCCeEEEEEcccCccCceeEEEEEEcCCcc-eEEEEEEEEecCC
Q psy7042 232 FTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGS-VSGTFTINITGLP 277 (2245)
Q Consensus 232 ~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~V~~~p 277 (2245)
..|.|.++..+|+|.|+|.|.|..|. .+..+.|.|.+.+
T Consensus 165 -------~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~~ 204 (218)
T 3k0w_A 165 -------KLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIIDELN 204 (218)
T ss_dssp -------SEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEECC--
T ss_pred -------CEEEEeecChhcCEEEEEEEEcCCCCceeeeEEEEEeCCc
Confidence 26999999999999999999998887 6778888887643
No 147
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=99.83 E-value=1.7e-19 Score=217.12 Aligned_cols=275 Identities=15% Similarity=0.104 Sum_probs=205.1
Q ss_pred CCCceEEcCCCeEEEEEEEecc-------CCcEEEEEECCEEeecCCceEEEEcCCeEEEEEcccCcccceEEEEEEEcC
Q psy7042 1796 MPNALYIPEGDNTKVKIFYAGD-------QPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNS 1868 (2245)
Q Consensus 1796 ~~~~~~~~~g~~~~l~C~~~~~-------p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 1868 (2245)
.|.+..+..|++++|.|.+.+. |.+.|.|+++|+.|... ++.+ ..+....|.|.++...+ |.|+|.|.|.
T Consensus 10 ~P~~~~v~~G~~v~l~C~~~~~~~~~~~~p~p~i~W~~~g~~i~~~-~~~~-~~~~~~~L~i~~~~~~~-g~Y~C~a~~~ 86 (303)
T 1i1r_A 10 SPESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKE-QYTI-INRTASSVTFTDIASLN-IQLTCNILTF 86 (303)
T ss_dssp ESSSCEEETTCCEEEEEEECHHHHHHHTCCGGGEEEEETTEECCGG-GCEE-EETTEEEEEECSCCCSE-EEEEEEEEET
T ss_pred ccCCceEeCCCCEEEEEEECCccccccCCChhheEEEECCEECChh-heee-eCCcEEEEEEcCcCCCc-eEEEEecccC
Confidence 4567789999999999999964 78999999999988654 3333 23445689999999884 9999999884
Q ss_pred Cee--eEEEEEEEEeCCCCCCCCCceecccccceEEEEecCCCCCCCeeeeEEEEEEEcCCCCceEEEeeecCcceEEec
Q psy7042 1869 SGS--VSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQ 1946 (2245)
Q Consensus 1869 ~g~--~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~ 1946 (2245)
.+. ....+.+.+..+|.+|. .+.+......++.|+|.+|...+ . +..|.+++.......|.........+.+.|.
T Consensus 87 g~~~~~~~~~~l~v~~~P~~P~-~l~~~~~~~~~v~l~W~~~~~~~-~-~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~ 163 (303)
T 1i1r_A 87 GQLEQNVYGITIISGLPPEKPK-NLSCIVNEGKKMRCEWDGGRETH-L-ETNFTLKSEWATHKFADCKAKRDTPTSCTVD 163 (303)
T ss_dssp TTEEEEEEEEEEEEECCCCCCE-EEEEEEETTSCCEEEEECCSCCS-S-CCEEEEEEEETTEECCCEECCSSCTTEEECS
T ss_pred CCcceEEEEEEEeccCCCCCCe-eeEEEECCCCcEEEEccCCCCCC-C-CcCEEEEEEecCCCCccCCCcCCCceEEEEC
Confidence 222 23445677777777664 35555555688999999887554 2 4789999876654445444455667899999
Q ss_pred CC-CCCCeEEEEEEEECCCCCCCCCCCcCceeccCCCCCCCCCCCcEEEEE--cCCeEEEEEeccCCCCCCceeEEEEEE
Q psy7042 1947 GL-TEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQV--GGDFVNLSWDKPLDDGGSRIQGYWIDK 2023 (2245)
Q Consensus 1947 ~l-~~~~~y~~~~~a~n~~g~~~~s~~~~~~~~~~~~~~p~~p~~~~~~~~--~~~~v~l~W~~p~~~~~~~i~~y~i~~ 2023 (2245)
+| .+++.|.|+|.|.|..|.+.++... .......+|.+|..+.+... ..+++.|+|.+|...+ ..+.+|+|+|
T Consensus 164 ~L~~p~t~Y~f~V~A~N~~G~~~s~~~~---~~~~~~~~p~pP~~~~v~~~~~~~~sv~l~W~~p~~~~-~~i~~Y~v~y 239 (303)
T 1i1r_A 164 YSTVYFVNIEVWVEAENALGKVTSDHIN---FDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKS-VIILKYNIQY 239 (303)
T ss_dssp SCCCTTSCEEEEEEEEETTEEEECCCEE---ECGGGGEECCCCEEEEEECCSSSSSCEEEEEECCGGGG-TSCEEEEEEE
T ss_pred CcCcccccEEEEEEEEcCCCCcccCCEE---ECHHHeEecCCCcceEEEEecCCCCEEEEEECCCCCCC-cccEEEEEEE
Confidence 99 9999999999999999988643211 11111235677777766544 5689999999886644 5899999999
Q ss_pred eeecCccceEEEEE--EeccceEEeCCCcCCceEEEEEEEEeccccCCCcCCCCccccc
Q psy7042 2024 HEVGSDAWQRVNVA--ICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIK 2080 (2245)
Q Consensus 2024 ~~~~~~~~~~~~~~--~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~s~~v~~~ 2080 (2245)
+..++..|..+... ......+.|.+|.++..|.++++|.|.+|.+..+..+..+...
T Consensus 240 ~~~~~~~w~~~~~~~~~~~~~~~~l~~L~p~t~Y~~rV~A~n~~G~G~~S~wS~~~~~~ 298 (303)
T 1i1r_A 240 RTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGI 298 (303)
T ss_dssp EETTCSSCEECCGGGGCSCCSEEEECSCCTTCEEEEEEEEEETTSCSCCCCCCCCEEEE
T ss_pred EeCCCCCceEEccccCCCceeEEEeCCCCCCCEEEEEEEeccCCCCCCcCCCCCcccee
Confidence 99888888765432 2345689999999999999999999999988777666555443
No 148
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.83 E-value=1.5e-20 Score=214.07 Aligned_cols=181 Identities=21% Similarity=0.358 Sum_probs=146.9
Q ss_pred CceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECCeec------------cCCCeEEEEEcCcEEEEEEeeeccCCC
Q psy7042 91 PDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREI------------SSGARYRVETAGGVFRLHFNEVTDVDN 158 (2245)
Q Consensus 91 P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l------------~~~~~~~~~~~~~~~~L~i~~~~~~d~ 158 (2245)
+.|..++..+.+.+|+.++|.|.+.+.|.+.|.|+|++..+ ....++.+.. . .|.|.+++.+|+
T Consensus 2 ~~v~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~--~L~i~~v~~~D~ 77 (212)
T 1f97_A 2 GSVYTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSS--S--GITFSSVTRKDN 77 (212)
T ss_dssp CEEECSCSEEEEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEET--T--EEEESCCCGGGC
T ss_pred ceEEecCCCeEEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEeec--e--eEEEcccCcccC
Confidence 45777888899999999999999999999999999987653 2234555443 2 599999999999
Q ss_pred eEEEEEEEcCcc--cceeEEEEEecCCCeeecCCCceEEcCCCeEEEEEE-EecCCCceEEEeeCce-eeecCCc-----
Q psy7042 159 GDYTCEAYNSVG--FAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIF-YAGDQPMEVSLTKNGR-VVQSDDR----- 229 (2245)
Q Consensus 159 G~Y~C~a~n~~g--~~~~~~~l~V~~~P~~~~~~~~~~v~~G~~~~l~C~-~~g~p~~~i~W~~~g~-~l~~~~~----- 229 (2245)
|.|+|.|.|..| ..+..+.|.|..+|.+...+....+.+|+.+.|.|. +.|.|.+.+.|+|+|. .+.....
T Consensus 78 G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~~~~~~~ 157 (212)
T 1f97_A 78 GEYTCMVSEEGGQNYGEVSIHLTVLVPPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAF 157 (212)
T ss_dssp EEEEEEEEETTSSSEEEEEEEEEEEBCCCCCEEECCSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC-----CBSC
T ss_pred eEEEEEEEccCCCcccEEEEEEEEEcCCCCcccCCccccCCCCeEEEEEEcccCcCCCEEEEEeCCcccccccccccccc
Confidence 999999999877 455678899999998877666778999999999999 7899999999999999 8765433
Q ss_pred --eEEEEeCCeEEEEEcccCccCceeEEEEEEcCCcce--EEEEEEEEec
Q psy7042 230 --FKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV--SGTFTINITG 275 (2245)
Q Consensus 230 --~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~--~~~~~l~V~~ 275 (2245)
..+........|.|.++..+|+|.|+|.|.|..|.. +..+.|.|.+
T Consensus 158 ~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~V~~ 207 (212)
T 1f97_A 158 MNSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAVE 207 (212)
T ss_dssp SSSCEEECTTTCCEEESSCCGGGCEEEEEEEECSSSCCEECCCEEEEEES
T ss_pred cCceeEecCCCceEEEEecChhhCcEEEEEEccccCCccccceEEEEEEE
Confidence 122333344579999999999999999999999987 6677777765
No 149
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.83 E-value=1.3e-20 Score=208.28 Aligned_cols=170 Identities=12% Similarity=0.079 Sum_probs=136.0
Q ss_pred ceEEcCCCeEEEEEE---ecCcCCCeEEEeeCCEecc-----------------CCceEEEEecCcEEEEEEeeeccCCC
Q psy7042 1706 DLVVPLGKLLTLQCE---ATGTPVPKCRWLRNGREIS-----------------SGARYRVETAGGVFRLHFNEVTDVDN 1765 (2245)
Q Consensus 1706 ~~~~~~G~~v~L~C~---~~~~p~~~v~W~~~~~~l~-----------------~~~~~~~~~~~~~~~L~i~~v~~~d~ 1765 (2245)
.+.+..|++++|.|. +.+.|.+.|+|+|+|..+. ...++.+....+..+|.|.+++.+|+
T Consensus 2 ~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 81 (203)
T 4fa8_A 2 AVTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHD 81 (203)
T ss_dssp CCEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGC
T ss_pred CeEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHC
Confidence 467899999999995 5688999999999874321 12345556667788999999999999
Q ss_pred eEEEEEEecCceeeEEEEEEEecCCCccccCCCceEEcCCCeEEEEEEEeccCCcEEEEEECCEEeec----CCceEEEE
Q psy7042 1766 GDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQS----DDRFKFTV 1841 (2245)
Q Consensus 1766 G~Y~C~~~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~v~W~~~g~~l~~----~~~~~~~~ 1841 (2245)
|.|+|.|.|..|.....+.|.|..||.+...+....+.+|+++.|.|.+.|.|.|.|+|++++..+.. ..++.+..
T Consensus 82 G~Y~C~a~n~~g~~~~~~~l~V~~p~~~~~~~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~~~~~~~r~~~~~ 161 (203)
T 4fa8_A 82 GNYLCRMKLGETEVTKQEHLSVVKPLTLSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPTAANGGVMKEK 161 (203)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEEEEEEEEEEEECCSSCSCCEEEEEEEEEESCCEEEECCC------------CCEECT
T ss_pred eEEEEEEEcCCCcEEEEEEEEecCCceeeecceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCeeecCcccccceEEEeC
Confidence 99999999999999999999999999988888888899999999999999999999999987654432 23333332
Q ss_pred cCCeEEEEEcccCcccceEEEEEEEcCCeeeEEE
Q psy7042 1842 LDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGT 1875 (2245)
Q Consensus 1842 ~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 1875 (2245)
.+....|.|.++..+|+|.|+|.|.|.+|+....
T Consensus 162 ~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~v 195 (203)
T 4fa8_A 162 DGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAHGV 195 (203)
T ss_dssp TSCEEEEEEEEECSSCCCCEEEEEESSSCEEEEE
T ss_pred CCCEEEEEECCCCHHHCEEEEEEEEcCCCEEEEE
Confidence 3444567778999999999999999999988754
No 150
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.83 E-value=1.9e-19 Score=201.27 Aligned_cols=178 Identities=15% Similarity=0.249 Sum_probs=153.0
Q ss_pred CCCceeccCCceEEcCCCeEEEEEEec-CcCCCeEEEeeCCEeccCC--ceEEEEecCc-------EEEEEEeeeccCCC
Q psy7042 1696 EKPDFIVPLKDLVVPLGKLLTLQCEAT-GTPVPKCRWLRNGREISSG--ARYRVETAGG-------VFRLHFNEVTDVDN 1765 (2245)
Q Consensus 1696 ~~p~~~~~~~~~~~~~G~~v~L~C~~~-~~p~~~v~W~~~~~~l~~~--~~~~~~~~~~-------~~~L~i~~v~~~d~ 1765 (2245)
++|.|...+.+..+.+|++++|.|.+. +.|.+.+.|+++|..+... .++++..... ...|.|.+++.+|+
T Consensus 1 e~~~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 80 (195)
T 2c5d_C 1 EESPFVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDT 80 (195)
T ss_dssp -CCSEEECCCCEEECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTC
T ss_pred CCCeeccChhheEEecCCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCC
Confidence 367888889999999999999999998 9999999999999998766 3455544332 56799999999999
Q ss_pred eEEEEEEecCceeeEEE-EEEEecCCCccccCCCceEEcCCCeEEEEEEEeccCCc-EEEEEECCEEeecCCceEEEEcC
Q psy7042 1766 GDYTCEAYNSVGFAHTS-SRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPM-EVSLTKNGRVVQSDDRFKFTVLD 1843 (2245)
Q Consensus 1766 G~Y~C~~~n~~g~~~~~-~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~v~W~~~g~~l~~~~~~~~~~~~ 1843 (2245)
|.|+|.+.|..|..... +.|.|..+|.+...+....+.+|+.+.|.|.+.|.|.+ .+.|+++|..+...... .
T Consensus 81 G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~-----~ 155 (195)
T 2c5d_C 81 GQYQCLVFLGHQTFVSQPGYVGLEGLPYFLEEPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPGH-----G 155 (195)
T ss_dssp EEEEEEEEETTEEEECCCEEEEECCSCEEEECCCCEEECTTCCEEEEEEEECSSCCCEEEEEESSCBSSSSTTS-----S
T ss_pred cEEEEEEEeCCCceecccEEEEEecCCeEEcCCCcEEEcCCCEEEEEeECCCCCCCCEEEEEECCEeccCCCCc-----C
Confidence 99999999988776544 89999999999888888999999999999999999999 99999999988665432 3
Q ss_pred CeEEEEEcccCcccceEEEEEEEcCCeeeE-EEEEEEE
Q psy7042 1844 DYIIIFIKEIRKEDAGDYTVNLSNSSGSVS-GTFTINI 1880 (2245)
Q Consensus 1844 ~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~-~~~~l~v 1880 (2245)
....|.|.++. |+|.|+|.|.|..|... ..+.|.|
T Consensus 156 ~~~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 156 PQRSLHVPGLN--KTSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp CCEEEEECCCS--SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred CCCeEEEcccc--cCceEEEEEEcCCCceEEEEEEEEE
Confidence 45689999987 78999999999999886 7888888
No 151
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=99.83 E-value=1.6e-19 Score=216.69 Aligned_cols=272 Identities=20% Similarity=0.245 Sum_probs=194.7
Q ss_pred CCCCCCCCCeeee-----ecCCcEEEEeeCC-CCCCCcccccEEEEeeeCCCCCeEEEceeeeeeEEEecCCCCCEEEEE
Q psy7042 668 DRPDPPQFPTVED-----IGHDSLALVWRAP-IWDGGSNITNYIVEKREHPMSSWIRVGNTRFTTMAITGLSPGHQYEFR 741 (2245)
Q Consensus 668 ~~P~~p~~~~~~~-----~~~~si~lsW~~p-~~~~~~~~~~y~v~~~~~~~~~w~~~~~~~~~~~~i~~L~p~t~y~~~ 741 (2245)
++|..|.++.... .+.+++.|+|+++ ..++++.+.+|.|+++......+. .......+.+|.|++.|.|+
T Consensus 2 ~~Ps~p~~~~~~~~~~~~~g~~sv~l~W~p~~~~~~~g~i~~Y~V~~~~~~~~~~~----~~~~~~~~~~l~p~t~Y~~~ 77 (290)
T 3l5i_A 2 DRPSKAPSFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSHLQN----YTVNATKLTVNLTNDRYLAT 77 (290)
T ss_dssp CCCSSCCCEEEEEEECSSTTCEEEEEEECCCCHHHHCSCEEEEEEEEEETTSCCEE----EEESSSEEEEEECSSCEEEE
T ss_pred CCCCCCCceeEEecccccCCCceEEEEEccCCchhcCCceEeEEEEEEeCCcCcee----EecCCcEEEEEcCCceEEEE
Confidence 4677777765432 3468999999973 345677899999999986654431 12235578899999999999
Q ss_pred EEEEecccCCCCCCCCccEEecCccccccccccccccCCCceeecccccccccCCceEEEEeeeccCccccccccceecc
Q psy7042 742 VYAENVYGRSDPSTTSDLITTKDTFKKQIKKRQYDFDETGKKIRGKADEKVSDYDQYVFDIYSKYVPQPVDIKTSSVYDH 821 (2245)
Q Consensus 742 v~a~n~~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 821 (2245)
|.|.|..|.+.++. + .....
T Consensus 78 V~A~n~~G~s~~s~---~-~~~~~-------------------------------------------------------- 97 (290)
T 3l5i_A 78 LTVRNLVGKSDAAV---L-TIPAC-------------------------------------------------------- 97 (290)
T ss_dssp EEEEESSCBCCCEE---E-EECCT--------------------------------------------------------
T ss_pred EEEEcCCCCCCCce---E-Eeecc--------------------------------------------------------
Confidence 99999999875442 0 00000
Q ss_pred cccccccccCceeEEEEeeecccCCeeEEEeeccCCchhhhhhheeeeeeeccCCCceEeecccccCCcceEEEEEEecC
Q psy7042 822 YDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFEVLDR 901 (2245)
Q Consensus 822 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 901 (2245)
...+
T Consensus 98 ----------------------------------------------------------------------------~~~~ 101 (290)
T 3l5i_A 98 ----------------------------------------------------------------------------DFQA 101 (290)
T ss_dssp ----------------------------------------------------------------------------TCCC
T ss_pred ----------------------------------------------------------------------------cccC
Confidence 0025
Q ss_pred CCCCcccEEeeeeCceEEEEecCCCCCCCCccceEEEeeeecCCC-----ceEEecceeeeceEEEecCCCCceeeEEEE
Q psy7042 902 PHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNST-----VWTKVSSYVTTPFVRVRNLAIGSTYEFRVM 976 (2245)
Q Consensus 902 P~~p~~l~~~~~~~~~~~l~W~~p~~~~g~~i~~y~i~~~~~~~~-----~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~ 976 (2245)
|.+|.++.+.... +++.|+|++|.. .+.+|.|+|...... .|..+. ......+.+.+|.|++.|.|+|.
T Consensus 102 ~~p~~~~~~~~~~-~si~l~W~~p~~----~i~~Y~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~L~p~t~Y~~~V~ 175 (290)
T 3l5i_A 102 THPVMDLKAFPKD-NMLWVEWTTPRE----SVKKYILEWCVLSDKAPCITDWQQED-GTVHRTYLRGNLAESKCYLITVT 175 (290)
T ss_dssp CCCCEEEEEEEET-TEEEEEEECCSS----CCCEEEEEEEEECSSSCCCCEEEEEE-TTCSEEECCSCCCTTCEEEEEEE
T ss_pred CCccceeEEEeCC-CeEEEEEeCCCC----CCCcEEEEEEECCCCCCCCcCeEEcc-CCCcceEEecCcCCccEEEEEEE
Confidence 6677778777654 699999999853 789999999875444 354443 33455788899999999999999
Q ss_pred EEeccccCCCccccCcccccCCCCCCCCCCCCeeEeecCCeEEEEecCCC-CCCCCccceEEEEEEecCCccceeccccc
Q psy7042 977 AENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSISLVWSKPR-HDGGSPIQRYIVEKRLISDDKWIKASMAH 1055 (2245)
Q Consensus 977 a~n~~g~~~~s~~~~~~~~~t~~~~p~~p~~~~~~~~~~~~v~l~W~~p~-~~~~~~i~~y~v~~~~~~~~~~~~~~~~~ 1055 (2245)
|.|..|.|... .+...+....|..|..+.+...+.+++.|+|++|. ...+++|.+|.|+|+..++.. .....
T Consensus 176 A~n~~g~g~~~----~~~~~t~~~~P~~~p~~~~~~~~~~sv~l~W~~~~~~~~~g~i~~Y~v~~~~~~~~~-~~~~~-- 248 (290)
T 3l5i_A 176 PVYADGPGSPE----SIKAYLKQAPPSKGPTVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGNE-TAVNV-- 248 (290)
T ss_dssp EEETTEECCCE----EEEEESSCCCCSSCCCEEEEEECSSCEEEEECCCCHHHHSSCCCEEEEEEEETTSCC-EEEEE--
T ss_pred EEeCCcccccE----EEEeEccccCCCCCCeeeEeeccCCEEEEEEcCCChhccCCEEEEEEEEEEeCCCCe-EEEEe--
Confidence 99999988743 34555778888877788888899999999999532 223456999999998765432 21111
Q ss_pred cCCcceeEEEEeecccccCCccCchhhhhhhhhcccccccccccCCcEEEEEEEEEecCCCCCCCCCCc
Q psy7042 1056 IPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSD 1124 (2245)
Q Consensus 1056 ~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~v~A~n~~G~~~~s~~~~ 1124 (2245)
..... .++|.+|.+++.|.|+|+|.|.+| |+.+....
T Consensus 249 -~~~~~------------------------------~~~~~~L~p~t~Y~~~V~A~n~~G-g~~s~~~~ 285 (290)
T 3l5i_A 249 -DSSHT------------------------------EYTLSSLTSDTLYMVRMAAYTDEG-GKDGPEFT 285 (290)
T ss_dssp -ETTCS------------------------------EEEECSCCTTCEEEEEEEEEETTE-EEECCCEE
T ss_pred -CCCce------------------------------EEEeCCCCCCCEEEEEEEEEeCCC-CCCCCceE
Confidence 11111 126999999999999999999999 66555433
No 152
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.82 E-value=8.8e-20 Score=224.53 Aligned_cols=164 Identities=12% Similarity=0.178 Sum_probs=102.5
Q ss_pred ccccccceeeEEEEecc-Cc-CeEEEEeCCeecCCCccEEEEeeCC----eEEEEEecccccCCceEEEEEEeCCCCCCc
Q psy7042 491 NAIQNHNAQFQCTITGC-PK-PTISWLKGSREITPSARHHIFAEGD----TYTLIINSVYGVDADEYVCRAVNKGGVKST 564 (2245)
Q Consensus 491 ~~~~g~~~~l~C~~~g~-p~-~~v~W~~~~~~i~~~~~~~~~~~~~----~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~ 564 (2245)
.+.+|+.+.|.|.+.|. |. +.+.|+|++..+...........++ ...|.|.++..+| |.|+|.|.|..|....
T Consensus 131 ~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~ 209 (344)
T 1za6_B 131 KSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKV 209 (344)
T ss_dssp TTTSSSEEEEEEEEEEEBSSCCCEEETTTTBCTTEEECCCEECTTSCEEEEEEEEEETTHHHH-BCEEEEEEEGGGTEEE
T ss_pred cccCCCcEEEEEEEeeEECCCeEEEEecCCccCceeECCCeECCCCCEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCccc
Confidence 35689999999999996 54 7999999997642110000111111 1279999999888 9999999998876433
Q ss_pred ceeEe--E----------------------ecCCCCCCCCCcccceEeeCCCeEEEEEeeeec-C-CCeEEEEeCCeEee
Q psy7042 565 KAELI--I----------------------MTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGY-P-KPKITWYRDNEVIE 618 (2245)
Q Consensus 565 ~~~l~--v----------------------~~~p~~~~~p~~~~~~~~~~g~~~~l~C~~~g~-p-~~~i~W~~~~~~~~ 618 (2245)
...+. | ..+|.+...+... . ...|+.++|.|.+.|. | .+.|+|+++|..+.
T Consensus 210 ~~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~P~v~~~~~~~--~-~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~ 286 (344)
T 1za6_B 210 DKKVEPKSCDKTHTCPPCGGGSSGGGSGGQPREPQVYTLPPSR--D-ELTKNQVSLTCLVKGFYPSDIAVEWESNGQPEN 286 (344)
T ss_dssp EEEECCCCC--------------------CCBCCEEEEECCCG--G-GGGSSSEEEEEEEEEEBSSCCEEEEESSSSCCC
T ss_pred eEeecccccccccccCCCCCCccccccCCCCcCCEEEEeCCCh--H-hccCCcEEEEEEEeeEECCCeEEEEEECCeECC
Confidence 22222 1 1223222111100 1 1236669999999985 4 36899999998875
Q ss_pred ccCeEEEEecCC-----eEEEEEcCCCCCcCEEEEEEEEeCCCCc
Q psy7042 619 SGGHFHVETSER-----HAILTIRDASNVDTAPYRVVAENDLGMD 658 (2245)
Q Consensus 619 ~~~~~~~~~~~~-----~~~l~i~~~~~~d~g~y~C~a~n~~g~~ 658 (2245)
......+....+ ...|.|.....+|.|.|+|.|.|.....
T Consensus 287 ~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~~~~l~~ 331 (344)
T 1za6_B 287 NYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHN 331 (344)
T ss_dssp SEEECCCEECTTSCEEEEEEEEECHHHHHTTCEEEEEEECTTSTT
T ss_pred CcEecceEECCCCcEEEEEEEEEChHHccCCCeEEEEEEcCCCCC
Confidence 432222211111 2346666666667999999999977643
No 153
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.82 E-value=9.4e-20 Score=198.71 Aligned_cols=167 Identities=20% Similarity=0.219 Sum_probs=136.3
Q ss_pred CCCCceecCCcceEEeCCCeEEEEEEEeeecCCc-eEEEECCeeccCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEE
Q psy7042 88 GEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPK-CRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAY 166 (2245)
Q Consensus 88 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~-i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 166 (2245)
..+|.|...|....+.+|+.++|.|.+.+.|.+. +.|+|+|..+... +. .|.|.+++.+|+|.|+|.|.
T Consensus 5 ~~~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~~~--------~~--~L~i~~~~~~d~G~Y~C~~~ 74 (175)
T 1fnl_A 5 LPKAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQ--------AS--SYFIDAATVNDSGEYRCQTN 74 (175)
T ss_dssp CCCCEEEEESCCSEEETTCCEEEEEECCCBTTBCCCEEEETTEEEESS--------CS--EEEESSCCGGGCEEEEEECS
T ss_pred CCCCEEEEcCCceeeeCCCcEEEEeeCCCCCCCcceEEEECCEEccCC--------ce--EEEEeCCCcccCEEEEEEee
Confidence 3578899999888999999999999999988776 8999999887632 22 69999999999999999999
Q ss_pred cCcccceeEEEEEecCCCeeecCCCceEEcCCCeEEEEEEEecCCC-ceEEEeeCceeeecCCceEEEEeCCeEEEEEcc
Q psy7042 167 NSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQP-MEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKE 245 (2245)
Q Consensus 167 n~~g~~~~~~~l~V~~~P~~~~~~~~~~v~~G~~~~l~C~~~g~p~-~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~ 245 (2245)
|..+ +..+.|.|..+|.+...+ ...+.+|+.++|.|.+.+.|+ +.+.|+|+|..+... .....|.|.+
T Consensus 75 n~~~--s~~~~l~V~~~~~~~~~~-~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~~--------~~~~~L~i~~ 143 (175)
T 1fnl_A 75 LSTL--SDPVQLEVHIGWLLLQAP-RWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKYF--------HHNSDFHIPK 143 (175)
T ss_dssp SSCC--CCCEEEEEECSSEEEECS-CSEEETTCCEEEEEEECTTCCCEEEEEEETTEEEEEE--------EECCCEEESS
T ss_pred CCcc--cccEEEEEeCCCceeeCC-CceecCCCCEEEEEEcCCCCCceEEEEEECCeEccCC--------CCCCEEEEcc
Confidence 8554 456778887766655444 467889999999999988765 599999999988421 1223699999
Q ss_pred cCccCceeEEEEEEcCCcc-eEEEEEEEEec
Q psy7042 246 IRKEDAGDYTVNLSNSSGS-VSGTFTINITG 275 (2245)
Q Consensus 246 ~~~~d~G~Y~C~a~n~~g~-~~~~~~l~V~~ 275 (2245)
+..+|+|.|+|.|.|..|. .+..+.|.|.+
T Consensus 144 v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~ 174 (175)
T 1fnl_A 144 ATLKDSGSYFCRGLVGSKNVSSETVNITITQ 174 (175)
T ss_dssp CCGGGCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred cChhhCeEEEEEEEcCCCCccCccEEEEEeC
Confidence 9999999999999997654 56678888865
No 154
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.82 E-value=4.7e-20 Score=224.86 Aligned_cols=165 Identities=13% Similarity=0.217 Sum_probs=109.9
Q ss_pred cccccccccceeeEEEEecc-CcC---eEEEEeCC-eecCCCccEEE-EeeC---CeEEEEEecccccCCceEEEEEEeC
Q psy7042 488 RNANAIQNHNAQFQCTITGC-PKP---TISWLKGS-REITPSARHHI-FAEG---DTYTLIINSVYGVDADEYVCRAVNK 558 (2245)
Q Consensus 488 ~~~~~~~g~~~~l~C~~~g~-p~~---~v~W~~~~-~~i~~~~~~~~-~~~~---~~~~L~i~~v~~~d~G~Y~C~a~n~ 558 (2245)
....+.+|+++.|.|.+.|. |.+ .|.|+|++ ..+........ ..++ ....|.|.++..+|+|.|+|.|.|.
T Consensus 121 ~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n~ 200 (323)
T 2wqr_A 121 SPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHP 200 (323)
T ss_dssp CHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECT
T ss_pred CHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccccCCCccCCCCCEEEEEEEEECHHHccCCCCEEEEEECC
Confidence 34557889999999999985 455 89999975 44433222221 1111 1237999999999999999999998
Q ss_pred CCCCCcceeEeEe------cCCCCCCCCCcccceEeeCCCeEEEEEeeeec-CCC-eEEEEeCCeEeeccCeEE---EEe
Q psy7042 559 GGVKSTKAELIIM------TAPKFNVPPRFRDTAYFDKGENVVVKIPFTGY-PKP-KITWYRDNEVIESGGHFH---VET 627 (2245)
Q Consensus 559 ~g~~~~~~~l~v~------~~p~~~~~p~~~~~~~~~~g~~~~l~C~~~g~-p~~-~i~W~~~~~~~~~~~~~~---~~~ 627 (2245)
.+.. ...+.|. .+|.+...+.... ...|+.++|.|.+.|. |++ .|+|+++|..+..+.... ...
T Consensus 201 ~~~~--~~~~~v~~~~~~~~~P~v~~~~~~~~---~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~ 275 (323)
T 2wqr_A 201 HLPR--ALMRSTTKTSGPRAAPEVYAFATPEW---PGSRDKRTLACLIQNFMPEDISVQWLHNEVQLPDARHSTTQPRKT 275 (323)
T ss_dssp TSSS--CEEEEECCCCSCCBCCEEEEEECCCC---TTCTTEEEEEEEEEEEBSSCCEEEEEETTEECCGGGEEECCCEEC
T ss_pred CCCC--CeeeEEEccCCCCCCCEEEEeCCChH---HhcCCcEEEEEEeeeeeCCCcEEEEEECCEECCCCceeecCcccC
Confidence 7533 2334432 2333221111101 1229999999999984 443 899999999886542111 001
Q ss_pred cC----CeEEEEEcCCCCCcCEEEEEEEEeCCCC
Q psy7042 628 SE----RHAILTIRDASNVDTAPYRVVAENDLGM 657 (2245)
Q Consensus 628 ~~----~~~~l~i~~~~~~d~g~y~C~a~n~~g~ 657 (2245)
.+ ..+.|.|..+..+|.|.|+|.|.|..+.
T Consensus 276 ~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 309 (323)
T 2wqr_A 276 KGSGFFVFSRLEVTRAEWEQKDEFICRAVHEAAS 309 (323)
T ss_dssp SSSSEEEEEEEEEEHHHHHHCCCEEEEEECTTST
T ss_pred CCCcEEEEEEEEEChHHccCCCEEEEEEEeCCCC
Confidence 11 1357999999999999999999999887
No 155
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.82 E-value=8.7e-21 Score=233.38 Aligned_cols=204 Identities=18% Similarity=0.222 Sum_probs=163.8
Q ss_pred CcEEEEEEEEcCCCCCCCCCccccEEEeeccCCCCCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECCeeccCCC
Q psy7042 56 NDYEFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGA 135 (2245)
Q Consensus 56 d~G~Y~C~a~n~~g~~~~~~~~~~~~v~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~~ 135 (2245)
|.|.|+|.+.+..... .+ ..-.+|.|...+....+.+|+.++|.|.+.|.|.+.|.|++++..+....
T Consensus 136 ~~~~~~C~~~~~l~~l---------~~---~~c~~P~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~ 203 (347)
T 2ifg_A 136 PEQKLQCHGQGPLAHM---------PN---ASCGVPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATV 203 (347)
T ss_dssp GGGCCCCSSSSCSSCC---------CC---TTCCCCEEEEECCSSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEE
T ss_pred cccCCCCCCChHHhcC---------Cc---ccCCCCceeccCCceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeeccc
Confidence 6789999887621111 11 12358999999999999999999999999999999999999987654321
Q ss_pred eEEEEEcCcEEEEEEeeeccCCCe-EEEEEEEcCcccceeEEEEEecCCCeeecCCCceEEcCCCeEEEEEEEecCCCce
Q psy7042 136 RYRVETAGGVFRLHFNEVTDVDNG-DYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPME 214 (2245)
Q Consensus 136 ~~~~~~~~~~~~L~i~~~~~~d~G-~Y~C~a~n~~g~~~~~~~l~V~~~P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~ 214 (2245)
.. .......+|.|.+++.+|+| .|+|.|.|..|..+.++.|.|..+|.+ ....+.+|+.++|.|.+.|.|.|.
T Consensus 204 ~~--~~~~~~~~L~i~~v~~~D~G~~Y~C~a~n~~g~~~~~~~l~V~~~P~i----~~~~~~~g~~v~l~C~~~g~P~p~ 277 (347)
T 2ifg_A 204 MK--SGGLPSLGLTLANVTSDLNRKNVTCWAENDVGRAEVSVQVNVSFPASV----QLHTAVEMHHWCIPFSVDGQPAPS 277 (347)
T ss_dssp CC--CCCSSEEEEEEESCCSTTTTCCEEECCEETTEECCEEECCCCBEEEEE----EECCCEESSSEEEEEEEEEESCCE
T ss_pred cc--ceecccceEEEeeCChHHCCCeEEEEEEcCCCCEEEEEEEEEcCCCee----eeccCccCceEEEEEEeeecCCCc
Confidence 11 12234457999999999999 999999999999988999999999986 112245799999999999999999
Q ss_pred EEEeeCceeeecCCceEEEEeC-------CeEEEEEcccCccCceeEEEEEEcCCcceEEEEEEEEecCC
Q psy7042 215 VSLTKNGRVVQSDDRFKFTVLD-------DYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLP 277 (2245)
Q Consensus 215 i~W~~~g~~l~~~~~~~~~~~~-------~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 277 (2245)
|+|+|+|..+............ ..++|.|.++..+|+|.|+|.|.|..|..+.++.|.|.++|
T Consensus 278 i~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P 347 (347)
T 2ifg_A 278 LRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFMDNP 347 (347)
T ss_dssp EEEEETTEECCCCSSEEEEECCCCTTCCCEEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEECSCCCC
T ss_pred EEEEeCCEECCCCcceeeEEEeecCCCcccceEEEECCCCcccCceEEEEEecCCCceeeEEEEEecCCC
Confidence 9999999999865554332221 25679999999999999999999999999999999988765
No 156
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.82 E-value=8.5e-20 Score=203.68 Aligned_cols=181 Identities=13% Similarity=0.161 Sum_probs=138.6
Q ss_pred CCCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECCeeccCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEEcC
Q psy7042 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNS 168 (2245)
Q Consensus 89 ~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 168 (2245)
++|.|...|.. .+.+|++++|.|.+.+ |.+.+.|+|+|..+....+ ..........|.|.+++.+|+|.|+|.|.|.
T Consensus 4 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~-~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 80 (196)
T 3p2t_A 4 PKPTLWAEPGS-VISWGNSVTIWCQGTL-EAREYRLDKEESPAPWDRQ-NPLEPKNKARFSIPSMTEDYAGRYRCYYRSP 80 (196)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTSCSCSEEE-CCCSSSSEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCEEEccCCC-cCCCCCcEEEEeeCCC-CCCEEEEEECCCCCccccc-ccccCCceEEEEeccCCcccCceEEEEEeCC
Confidence 58899988887 8999999999999988 7789999999988764211 1111234457999999999999999999999
Q ss_pred ccc--ceeEEEEEecC---CCeeecCCCceEEcCCCeEEEEEEEecCCCceEEEeeCceeeecCCce-EEEEeCCeEEEE
Q psy7042 169 VGF--AHTSSRVKIGT---PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRF-KFTVLDDYIIIF 242 (2245)
Q Consensus 169 ~g~--~~~~~~l~V~~---~P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~-~~~~~~~~~~L~ 242 (2245)
.|. .+..+.|.|.. +|.+...+.. .+.+|+.++|.|.+.+ +++.+.|+|+|..+...... ..........|.
T Consensus 81 ~g~~~~s~~~~l~V~~~~~~p~~~~~~~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~ 158 (196)
T 3p2t_A 81 VGWSQPSDPLELVMTGAYSKPTLSALPSP-LVTSGKSVTLLCQSRS-PMDTFLLCKERAAHPLLCLRSEHGAQQHQAEFP 158 (196)
T ss_dssp TEEBCCCCCEEEEEECSSCCCEEEEESCS-EECTTCCEEEEEEEEE-EEEEEEEEETTCCCGGGSEEEEEEEEEEEEEEE
T ss_pred CcccCCCccEEEEecCCCCCCEEEeCCcc-eecCCCeEEEEEecCC-CCCEEEEEeCCCcccceeecccccccCcceEEE
Confidence 883 34467777753 5666665554 7889999999999988 45689999999877544322 222223456899
Q ss_pred EcccCccCceeEEEEEEcCCc-----ceEEEEEEEEe
Q psy7042 243 IKEIRKEDAGDYTVNLSNSSG-----SVSGTFTINIT 274 (2245)
Q Consensus 243 i~~~~~~d~G~Y~C~a~n~~g-----~~~~~~~l~V~ 274 (2245)
|.++..+|+|.|+|.|.|..+ ..+..+.|.|.
T Consensus 159 i~~v~~~d~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~ 195 (196)
T 3p2t_A 159 MSPVTSVHGGTYRCFSSHGFSHYLLSHPSDPLELIVS 195 (196)
T ss_dssp ECSCCGGGCEEEEEEEECGGGTTEECCCCCCEEEEEC
T ss_pred eCCCcccCCCeEEEEEEcCCCCcccCCCCCCEEEEeC
Confidence 999999999999999999876 33445666654
No 157
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.82 E-value=5.9e-19 Score=194.99 Aligned_cols=166 Identities=20% Similarity=0.342 Sum_probs=139.4
Q ss_pred eEEeCCCeEEEEEEEeeecCC--ceEEEECCeeccCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEEcCcccceeEEE
Q psy7042 100 LVVPLGKLLTLQCEATGTPVP--KCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSR 177 (2245)
Q Consensus 100 ~~v~~G~~v~L~C~~~g~p~~--~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 177 (2245)
..+.+|+.++|.|.+.+.|.| .+.|+|+|..+...... .....|.|. +.+|+|.|+|.|.| .....+.
T Consensus 8 ~~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~~-----~~~~~l~i~--~~~d~G~Y~C~~~n---~~~~~~~ 77 (184)
T 3b5h_A 8 TVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALP-----GQKTEFKVD--SDDQWGEYSCVFLP---EPMGTAN 77 (184)
T ss_dssp EEEEETTEEEEEEEEESCSSCCCEEEEESSSEEEECTTCC-----CSEEEEEEC--GGGCCEEEEEEEES---TTSCEEE
T ss_pred EEEecCCCEEEEEECCCCCCCceEEEEEeCCEEeeccccc-----CCcEEEEEe--chhhCeEEEEEEEC---CcCcEEE
Confidence 467889999999999988777 89999999988765432 223356666 79999999999998 3446889
Q ss_pred EEecCCCeeecCCCceEEcCCCeEEEEEEEecCC-CceEEEee---Cceeee-c--CCceEEEEeCCeEEEEEcccC-cc
Q psy7042 178 VKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQ-PMEVSLTK---NGRVVQ-S--DDRFKFTVLDDYIIIFIKEIR-KE 249 (2245)
Q Consensus 178 l~V~~~P~~~~~~~~~~v~~G~~~~l~C~~~g~p-~~~i~W~~---~g~~l~-~--~~~~~~~~~~~~~~L~i~~~~-~~ 249 (2245)
|.|..+|.+...+....+.+|+.+.|.|.+.|.| .+.|.|+| ++..+. . ..++.+...+....|.|.++. .+
T Consensus 78 l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~ 157 (184)
T 3b5h_A 78 IQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEA 157 (184)
T ss_dssp EEECCSCCCEESCSEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEETTEEEEEECSCCTTT
T ss_pred EEEecCCceeecCCCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecCCeeEEEEeeccccc
Confidence 9999999999888888999999999999999999 89999999 554433 2 256777777777899999999 89
Q ss_pred CceeEEEEEEcCCcceEEEEEEEEec
Q psy7042 250 DAGDYTVNLSNSSGSVSGTFTINITG 275 (2245)
Q Consensus 250 d~G~Y~C~a~n~~g~~~~~~~l~V~~ 275 (2245)
|+|.|+|.|.|..|.....+.|.|..
T Consensus 158 d~G~Y~C~a~N~~g~~~~~~~l~V~~ 183 (184)
T 3b5h_A 158 DPGQYRCNGTSSKGSDQAIITLRVRS 183 (184)
T ss_dssp SSEEEEEEEEETTEEEEEEEEEEEC-
T ss_pred cCceEEEEEEeCCCcceEEEEEEEec
Confidence 99999999999999999999998863
No 158
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.82 E-value=3.7e-20 Score=238.43 Aligned_cols=231 Identities=51% Similarity=0.874 Sum_probs=170.5
Q ss_pred eeCCCCCCCCCeeeeecCCcEEEEeeCCCCCCCcccccEEEEeeeCCCCCeEEEceeeeeeEEEecCCCCCEEEEEEEEE
Q psy7042 666 ISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAE 745 (2245)
Q Consensus 666 v~~~P~~p~~~~~~~~~~~si~lsW~~p~~~~~~~~~~y~v~~~~~~~~~w~~~~~~~~~~~~i~~L~p~t~y~~~v~a~ 745 (2245)
...+|.||..+.+.+++.++++|+|.+|..|||++|++|.|+++..+...|..+.....+.+++.+|.|++.|+|||.|.
T Consensus 6 ~~~~P~pP~~P~v~~~~~~sv~L~W~~P~~DGgs~I~~Y~vE~~~~~~~~W~~v~~~~~t~~~V~~L~~g~~Y~FRV~A~ 85 (573)
T 3uto_A 6 DVPEPEPPRFPIIENILDEAVILSWKPPALDGGSLVTNYTIEKREAMGGSWSPCAKSRYTYTTIEGLRAGKQYEFRIIAE 85 (573)
T ss_dssp --CCCCCCEEEEEEEECSSCEEEEEECCSCCSSSCCCEEEEEEEESSSCCCEEEEEESSSEEEECCCCTTCEEEEEEEEE
T ss_pred cCCCCccCCCCEEEEeeCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEeccccCCEEEeCCCCCCCcEeEEEEEE
Confidence 34578999999999999999999999999999999999999999999999999887777899999999999999999999
Q ss_pred ecccCCCCCCCCccEEecCccccccccccccccCCCceeecccccccccCCceEEEEeeeccCccccccccceecccccc
Q psy7042 746 NVYGRSDPSTTSDLITTKDTFKKQIKKRQYDFDETGKKIRGKADEKVSDYDQYVFDIYSKYVPQPVDIKTSSVYDHYDIL 825 (2245)
Q Consensus 746 n~~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 825 (2245)
|..|.|++|..+..+..+............. .....+....... ...............+.+..+....+.+.|++.
T Consensus 86 N~~G~s~PS~~s~~v~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~il~~Y~i~ 162 (573)
T 3uto_A 86 NKHGQSKPCEPTAPVLIPGDERKRRRGYDVD--EQGKIVRGKGTVS-SNYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIH 162 (573)
T ss_dssp ETTEECCCCCCCCCEECC-------CCCEEC--SSSCEECCCCCCC-SCGGGGCCCHHHHCCCCCCCCBSSCGGGTEEEE
T ss_pred cCceEcCCcCCCCCEEcCCCCcccccccccc--ccccccccccccc-ccccccccccccccCCcccccCCCcCccccEEE
Confidence 9999999999988877655332111111111 1111111110000 000000001111112233344455566789999
Q ss_pred cccccCceeEEEEeeecccCCeeEEEeeccCCchhhhhhheeeeeeeccCCCceEeecccccCCcceEEEEEEe
Q psy7042 826 EEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFEVL 899 (2245)
Q Consensus 826 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 899 (2245)
+.+|.|.|+.+|.+....++..+++|.+......+.+.+..|+.++...+|++++.+.+.+.......+..+..
T Consensus 163 ~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~ 236 (573)
T 3uto_A 163 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM 236 (573)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred EEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence 99999999999999999999999999987777667777888999999999999999999988888777777654
No 159
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.81 E-value=1.2e-19 Score=202.57 Aligned_cols=184 Identities=26% Similarity=0.411 Sum_probs=156.3
Q ss_pred CCCceeccCCceEEcCCCeEEEEEEecCcCCCeEEEeeCCEeccC-CceEEEEecCcEEEEEEeeeccCCCeEEEEEEec
Q psy7042 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISS-GARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYN 1774 (2245)
Q Consensus 1696 ~~p~~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~~~~l~~-~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n 1774 (2245)
.+|.|..++..+.+.+|++++|.|.+.+.|.+.+.|++++..+.. ..++.+..++. .|.|.+++.+|+|.|+|.+.|
T Consensus 6 ~~P~i~~~~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~~~~ 83 (192)
T 2iep_A 6 KAPVITTPLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIRENGQ--LLTILSVEDSDDGIYCCTANN 83 (192)
T ss_dssp EEEEESSCCCEEEEETTSCEEEECCEEEESCCEEEEEETTEECCTTCTTEEEEGGGT--EEEESSCCGGGCEEEEEEEEC
T ss_pred CCceeecCccceeeeCCCcEEEEeeCCCCCCCeEEEEECCEEccccCccEEEcCCcc--EEEEcCCCcccCeEEEEEEEc
Confidence 467788888889999999999999999999999999999998864 45677665554 499999999999999999999
Q ss_pred Ccee-eEEEEEEEecCCCccccCCCceEEcCCCeEEEEEEEeccCCcEEEEEECCEEeecCCceEEEEcCCeEEEEEccc
Q psy7042 1775 SVGF-AHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEI 1853 (2245)
Q Consensus 1775 ~~g~-~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~l~i~~~ 1853 (2245)
..|. ......|.|..+|.+...+....+.+|+.+.|.|.+.|.|.+.+.|++++..+....++... . ...|.|.++
T Consensus 84 ~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~--~-~~~L~i~~~ 160 (192)
T 2iep_A 84 GVGGAVESCGALQVKMKPKITRPPINVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALRENSRIAVL--E-SGSLRIHNV 160 (192)
T ss_dssp SSSCCEEEEEEEEEEEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCCSSEEEC--T-TSCEEESSC
T ss_pred CCCceeEeEEEEEEEeCCccccCCcceEEeCCCcEEEEEEEeccCCceEEEEeCCEEccCCCcEEEe--c-CCcEEEecC
Confidence 8877 45668899999999888888889999999999999999999999999999998776655432 2 226999999
Q ss_pred CcccceEEEEEEEcCCeeeE-EEEEEEEeCCC
Q psy7042 1854 RKEDAGDYTVNLSNSSGSVS-GTFTINITGLP 1884 (2245)
Q Consensus 1854 ~~~d~G~Y~C~a~n~~g~~~-~~~~l~v~~~p 1884 (2245)
..+|+|.|+|.|.|..|... ..+.|.|..+|
T Consensus 161 ~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~pp 192 (192)
T 2iep_A 161 QKEDAGQYRCVAKNSLGTAYSKLVKLEVEVFA 192 (192)
T ss_dssp CGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred ChhhCEEEEEEEEcCCCcEEEEEEEEEEEeCC
Confidence 99999999999999999874 46888887543
No 160
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.81 E-value=9.6e-19 Score=198.94 Aligned_cols=173 Identities=23% Similarity=0.307 Sum_probs=151.9
Q ss_pred cCCCeEEEEEEecCc-CCCeEEEeeCCEeccCCceEEEEecCcEEEEEEeeeccCCCeEEEEEEecCceeeEEEEEEEec
Q psy7042 1710 PLGKLLTLQCEATGT-PVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIG 1788 (2245)
Q Consensus 1710 ~~G~~v~L~C~~~~~-p~~~v~W~~~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~l~V~ 1788 (2245)
-.|+.+.|.|.+.+. |.+.+.|+|+|..+....++.+...+....|.|.+++.+|+|.|+|.+.|..|.....+.|.|.
T Consensus 15 c~~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~v~ 94 (212)
T 2r15_A 15 STAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQ 94 (212)
T ss_dssp ECSSEEEEEEEBSSCCSSCEEEEEETTEECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHH
T ss_pred EcCceEEEEEEEeccCCCceEEEEECCEEccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEEEe
Confidence 467888999999874 5889999999999998889988888888899999999999999999999998888877777765
Q ss_pred ---------------------CCCccccCCCceEEcCCCeEEEEEEEeccCCcEEEEEECCEEeecCCceEEEEc-CCeE
Q psy7042 1789 ---------------------TPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVL-DDYI 1846 (2245)
Q Consensus 1789 ---------------------~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~-~~~~ 1846 (2245)
.++.+...+....+.+|+.+.|.|.+.|.|.+.+.|+++|..+....++.+... +...
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~ 174 (212)
T 2r15_A 95 AYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQTDHCNLKFEAGRTA 174 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTCCEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEETTTEE
T ss_pred eccchhhhccccCcccccccCCCcccccCCCcEEEccCCeEEEEEEEcCCCCceEEEEECCeECccCCCEEEEEcCCCEE
Confidence 234444566778899999999999999999999999999999988888777665 5668
Q ss_pred EEEEcccCcccceEEEEEEEcCCeeeEEEEEEEEeC
Q psy7042 1847 IIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITG 1882 (2245)
Q Consensus 1847 ~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 1882 (2245)
.|.|.++..+|+|.|+|.|.|..|..+..+.|.|..
T Consensus 175 ~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 210 (212)
T 2r15_A 175 YFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVFI 210 (212)
T ss_dssp EEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEcCcchHHCeEEEEEEEcCCCcEEEEEEEEEEc
Confidence 999999999999999999999999999999998863
No 161
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.81 E-value=5e-19 Score=196.70 Aligned_cols=178 Identities=21% Similarity=0.304 Sum_probs=149.3
Q ss_pred ceeccCCceEEcCCCeEEEEEEecCcCCCeEEEee-CCEeccCCceEEEEecCcEEEEEEeeeccCCCeEEEEEEecCce
Q psy7042 1699 DFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLR-NGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVG 1777 (2245)
Q Consensus 1699 ~~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~-~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g 1777 (2245)
.|...+.+..+.+|++++|.|.+.+.|. .+.|++ ++..+....++.+...+....|.|.+++.+|+|.|+|.+.|..|
T Consensus 4 ~~~~~~~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g 82 (189)
T 2v44_A 4 QVTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKG 82 (189)
T ss_dssp EEEESCSEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTS
T ss_pred EEEecCCceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCCC
Confidence 3455677889999999999999998877 899999 78888888888888888888999999999999999999999988
Q ss_pred ee-EEEEEEEecCCCccccCCCceEEcCCCeEEEEEEEeccCCcEEEEEECCEEeec--CCceEEEEcCCeEEEEEcccC
Q psy7042 1778 FA-HTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQS--DDRFKFTVLDDYIIIFIKEIR 1854 (2245)
Q Consensus 1778 ~~-~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~v~W~~~g~~l~~--~~~~~~~~~~~~~~l~i~~~~ 1854 (2245)
.. ...+.|.|..+|.+...+....+.+|+.+.|.|.+.|.|.+.+.|++++..+.. ..++.. ..+ ..|.|.++.
T Consensus 83 ~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~--~~~-~~L~i~~v~ 159 (189)
T 2v44_A 83 QTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAM--LAN-NNLQILNIN 159 (189)
T ss_dssp CEEEEEEEEEEECCCEEESCCCSEEEETTSCEEECCEEECSSCCEEEEEEEC--CEECCCTTEEE--CTT-SCEEETTCC
T ss_pred CcEEEEEEEEEecCCceeecCCcEEEeCCCCEEEEEEECcCCCCcEEEEECCcEEeccCCCCEEE--ecC-CcEEEEEcC
Confidence 65 667889999999988778888999999999999999999999999999988763 333332 222 379999999
Q ss_pred cccceEEEEEEEcCCeeeEEEEEEEE
Q psy7042 1855 KEDAGDYTVNLSNSSGSVSGTFTINI 1880 (2245)
Q Consensus 1855 ~~d~G~Y~C~a~n~~g~~~~~~~l~v 1880 (2245)
.+|+|.|+|.|.|..|.......+.|
T Consensus 160 ~~d~G~Y~C~a~n~~~~~~~~~~~~v 185 (189)
T 2v44_A 160 KSDEGIYRCEGRVEARGEIDFRDIIV 185 (189)
T ss_dssp GGGCEEEEEEEEETTTTEEEEEEEEE
T ss_pred cccCeEEEEEEEccccCceeeeeEEE
Confidence 99999999999999976655544444
No 162
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.81 E-value=1.1e-19 Score=204.32 Aligned_cols=182 Identities=14% Similarity=0.137 Sum_probs=138.1
Q ss_pred eecCCcceEEeCCCeEEEEEEEeeecC-----CceEEEE-CCeeccCCCeEEEEEcC---cEEEEEEeeeccCCCeEEEE
Q psy7042 93 FIVPLKDLVVPLGKLLTLQCEATGTPV-----PKCRWLR-NGREISSGARYRVETAG---GVFRLHFNEVTDVDNGDYTC 163 (2245)
Q Consensus 93 ~~~~~~~~~v~~G~~v~L~C~~~g~p~-----~~i~W~~-~g~~l~~~~~~~~~~~~---~~~~L~i~~~~~~d~G~Y~C 163 (2245)
+..++..+.+.+|++++|.|.+.+.|. +.|.|+| ++......+++.+..++ +..+|.|.+++.+|+|.|+|
T Consensus 5 v~~p~~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 84 (202)
T 3bp6_B 5 VTAPKEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRC 84 (202)
T ss_dssp EECSCSEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEE
T ss_pred EecCCcCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEE
Confidence 445666788999999999999998876 7899999 55555555666665432 45689999999999999999
Q ss_pred EEEcCcccceeEEEEEecCCCeeecCCCceEEcCCCeEEEEEEEecCCCceEEEeeCceeeecCCceEEEEeCCeEEEEE
Q psy7042 164 EAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFI 243 (2245)
Q Consensus 164 ~a~n~~g~~~~~~~l~V~~~P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i 243 (2245)
.|.|..|.....+.|.|..+|..... ....+.+|+.+.|.|.+.|.|.|.|.|++++..+.. .......+....|.|
T Consensus 85 ~~~~~~~~~~~~~~l~V~~~~~~p~~-~~~~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~~~--~~~~~~~~~~~~~~i 161 (202)
T 3bp6_B 85 LVICGAAWDYKYLTVKVKASYMRIDT-RILEVPGTGEVQLTCQARGYPLAEVSWQNVSVPANT--SHIRTPEGLYQVTSV 161 (202)
T ss_dssp EEEETTEEEEEEEEEEEEBCCCCEEE-EEEECTTTCCEEEEEEEEEBSCCEEEETTCCSCCEE--EEEECTTSCEEEEEE
T ss_pred EEEeCCCcceEEEEEEecCCCCcccE-EEEecCCCCeEEEEEEccccCCceEEEEeCCCCccC--ceeeCCCCCEEEEEE
Confidence 99999998888889999876531111 112457899999999999999999999998876532 111112233456788
Q ss_pred cccCccCceeEEEEEEcCCcceEEEEEEEEecCC
Q psy7042 244 KEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLP 277 (2245)
Q Consensus 244 ~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 277 (2245)
.++..+|+|.|+|.|.|..|....++.|.|.++.
T Consensus 162 ~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~v~~~~ 195 (202)
T 3bp6_B 162 LRLKPQPSRNFSCMFWNAHMKELTSAIIDPLSRM 195 (202)
T ss_dssp EEECCCTTCCEEEEEEETTTTEEEEEEECC----
T ss_pred EEEEcCCCCEEEEEEEcCCcccccEEEEEecCcC
Confidence 8999999999999999999999999998886543
No 163
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.81 E-value=1.4e-19 Score=204.75 Aligned_cols=179 Identities=11% Similarity=0.046 Sum_probs=131.7
Q ss_pred CCcceEEeCC--CeEEEEEEEeeecCCceEEEE---CCeeccCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEEcCcc
Q psy7042 96 PLKDLVVPLG--KLLTLQCEATGTPVPKCRWLR---NGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVG 170 (2245)
Q Consensus 96 ~~~~~~v~~G--~~v~L~C~~~g~p~~~i~W~~---~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g 170 (2245)
.|..+.+.+| +.++|.|.+.+ |.+.+.|+| +|..+..+.++.....+ .|.|.+++.+|+|.|+|.|.|..+
T Consensus 13 ~p~~v~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~~~~~~~~~~~---~l~I~~v~~~D~G~Y~C~a~n~~~ 88 (213)
T 2x1w_L 13 QHGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGNRISWDSKK---GFTIPSYMISYAGMVFCEAKINDE 88 (213)
T ss_dssp -CEEEEECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECCCSSSCEEETTT---EEEEEGGGTTTCSEEEEEEC----
T ss_pred CceEEEEecCCCccEEEeeccCC-CCcEEEEEhhcCCCccccCCCcccccCCc---cEEEccCChhcCceEEEEEEECCe
Confidence 4577899999 99999999986 778999988 47777666555544333 499999999999999999999655
Q ss_pred ccee-EEEEEecC--CCeeecCC-CceEEcCCCeEEEEEEEecCC--CceEEEeeCceeeecCCc-eEEEE-------eC
Q psy7042 171 FAHT-SSRVKIGT--PPRIDRMP-NALYIPEGDNTKVKIFYAGDQ--PMEVSLTKNGRVVQSDDR-FKFTV-------LD 236 (2245)
Q Consensus 171 ~~~~-~~~l~V~~--~P~~~~~~-~~~~v~~G~~~~l~C~~~g~p--~~~i~W~~~g~~l~~~~~-~~~~~-------~~ 236 (2245)
...+ .+.|.|.. +|.+...+ ..+.+.+|++++|.|.+.|.| ++.++|+++|..+..... ..... ..
T Consensus 89 ~~~s~~~~l~v~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~ 168 (213)
T 2x1w_L 89 SYQSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKK 168 (213)
T ss_dssp CEECCCEEEEECBCCEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSCSCEE
T ss_pred eEEEEEEEEEEeCCcccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEEEeccccccccCcccee
Confidence 4443 36777754 34444444 445899999999999999865 458999999887532211 00000 11
Q ss_pred CeEEEEEcccCccCceeEEEEEEcCCcceEEEEEEEEecCCC
Q psy7042 237 DYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPG 278 (2245)
Q Consensus 237 ~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~ 278 (2245)
...+|.|.++..+|+|.|+|.|.|..|..+.++.|.|.+.|.
T Consensus 169 ~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~ 210 (213)
T 2x1w_L 169 FLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEDPI 210 (213)
T ss_dssp EEEEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC---
T ss_pred eeEEEEECCCCcccCEEEEEEEecCCCcEEEEEEEEEecccc
Confidence 235799999999999999999999999999999999998763
No 164
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.81 E-value=1.9e-19 Score=200.38 Aligned_cols=179 Identities=15% Similarity=0.170 Sum_probs=133.1
Q ss_pred cCCcc-eEEeCCCeEEEEEEEeeecCCceEEEECC-eeccCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEEcCcccc
Q psy7042 95 VPLKD-LVVPLGKLLTLQCEATGTPVPKCRWLRNG-REISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFA 172 (2245)
Q Consensus 95 ~~~~~-~~v~~G~~v~L~C~~~g~p~~~i~W~~~g-~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 172 (2245)
..|.+ +.+.+|+.++|.|.+.|.|.|.|.|+++. ..+. .+. ...+....|.|.+++.+|+|.|+|.|.|..|..
T Consensus 5 i~p~~~~~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~~--~~~--~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~ 80 (202)
T 1vca_A 5 TTPESRYLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPLN--GKV--TNEGTTSTLTMNPVSFGNEHSYLCTATCESRKL 80 (202)
T ss_dssp EESSSEEEEETTSCEEEEEEEESCSSCEEEEEETTCCCCS--SEE--EEETTEEEEEESSCCGGGCSEEEEEEEETTEEE
T ss_pred ECCCCcEEEcCCCcEEEEEeecCCCCCeEEEECCCCCCcc--ceE--EEcCCccEEEECcCCHHHCEEEEEEEEECCceE
Confidence 34444 44559999999999999999999999843 3221 222 223444569999999999999999999999888
Q ss_pred eeEEEEEecCCCeee-cCCCceEEcCCCeEEEEEEEecC-CC--ceEEEeeCceeeecCCceEE----EEeCCeEEEEEc
Q psy7042 173 HTSSRVKIGTPPRID-RMPNALYIPEGDNTKVKIFYAGD-QP--MEVSLTKNGRVVQSDDRFKF----TVLDDYIIIFIK 244 (2245)
Q Consensus 173 ~~~~~l~V~~~P~~~-~~~~~~~v~~G~~~~l~C~~~g~-p~--~~i~W~~~g~~l~~~~~~~~----~~~~~~~~L~i~ 244 (2245)
+..+.|.|..+|... ..+. ..+.+|+.++|.|.+.|. |. +.|+|+|+|..|........ ........|.|.
T Consensus 81 ~~~~~l~V~~~p~~~~~~~~-~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~~~~~~~~~~~~~~~l~i~ 159 (202)
T 1vca_A 81 EKGIQVEIYSFPKDPEIHLS-GPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFT 159 (202)
T ss_dssp EEEEEEEEEBCCSCCEEEES-SCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECCSCCSSCCCEEEEEEEEEC
T ss_pred eeEEEEEEEeCCCCCEeCCc-eEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECcccccccccCcCcceEEEEEEEEE
Confidence 888999998877533 3333 668999999999999875 43 47999999998854311000 001123467889
Q ss_pred ccCccCceeEEEEEEcCCcc-------eEEEEEEEEecCCC
Q psy7042 245 EIRKEDAGDYTVNLSNSSGS-------VSGTFTINITGLPG 278 (2245)
Q Consensus 245 ~~~~~d~G~Y~C~a~n~~g~-------~~~~~~l~V~~~p~ 278 (2245)
....+|.|.|+|+|.|..|. ...++.|.|..+|.
T Consensus 160 ~~~~d~~g~ytC~A~n~~~~~~~~~~~~~~~~~L~V~y~P~ 200 (202)
T 1vca_A 160 PVIEDIGKVLVCRAKLHIDEMDSVPTVRQAVKELQVYISPK 200 (202)
T ss_dssp CCGGGTTCEEEEEEEECSCCCTTSCSEEEEEEECCEECCC-
T ss_pred eeeccCCCeEEEEEEccccCCCCcceeEeeEEEEEEecCCC
Confidence 98999999999999998875 45688899988774
No 165
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.81 E-value=1.5e-18 Score=193.77 Aligned_cols=181 Identities=22% Similarity=0.417 Sum_probs=153.3
Q ss_pred CCceeccCC--ceEEcCCCeEEEEEEecCcCCCeEEEeeCCEeccCCceEEEEecCcEEEEEEeeeccCCCeEEEEEEec
Q psy7042 1697 KPDFIVPLK--DLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYN 1774 (2245)
Q Consensus 1697 ~p~~~~~~~--~~~~~~G~~v~L~C~~~~~p~~~v~W~~~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n 1774 (2245)
+|.|...+. ++.+.+|++++|.|.+.+.|.+.+.|++++..+....++.+...+. .|.|.+++.+|+|.|+|.+.|
T Consensus 2 pP~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~~~~ 79 (192)
T 2va4_A 2 MPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNT--ELTVRNIINSDGGPYVCRATN 79 (192)
T ss_dssp CCEEECSCCEEEEETTSCCCEEEECEEECSSCCEEEEEETTEECCCSSSEEEETTTT--EEEECSCCGGGCEEEEEEEEE
T ss_pred CCcccCCCCCcEEEEecCCCEEEEEeeccCCCCeEEEEECCeEcCCCccEEEeCCee--EEEEecCChhcCcEEEEEEEc
Confidence 566655433 5788999999999999999999999999999998888877655444 599999999999999999999
Q ss_pred CceeeEEEEEEEecCCCccccCCCceEEcCCCeEEEEEEEeccCCcEEEEEEC--CEEeec-----CCceEEEEcCCeEE
Q psy7042 1775 SVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKN--GRVVQS-----DDRFKFTVLDDYII 1847 (2245)
Q Consensus 1775 ~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~v~W~~~--g~~l~~-----~~~~~~~~~~~~~~ 1847 (2245)
..|.......|.|..+|.+...+ ...+.+|+.+.|.|.+.|.|.+.+.|+++ +..+.. ..++.+........
T Consensus 80 ~~~~~~~~~~l~V~~~p~~~~~~-~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (192)
T 2va4_A 80 KAGEDEKQAFLQVFVQPHIIQLK-NETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSS 158 (192)
T ss_dssp TTEEEEEEEEEEEEEEEEEEEEC-CEEECTTSEEEEEEEEEEESCCEEEEEETTTTEEECTTCBCTTSCEEEEEETTEEE
T ss_pred cccccceEEEEEEEccCcccccC-cceEEeCCeEEEEEEecCCCCCcEEEEeCCCCceeeccccccCCcEEEeeccCceE
Confidence 99988888999998888876543 45677899999999999999999999998 666643 34455555566788
Q ss_pred EEEcccCcccceEEEEEEEcCCeeeEEEEEEEE
Q psy7042 1848 IFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINI 1880 (2245)
Q Consensus 1848 l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v 1880 (2245)
|.|.++..+|+|.|+|.|.|..|..+.++.|.|
T Consensus 159 L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 191 (192)
T 2va4_A 159 LHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDI 191 (192)
T ss_dssp EEEESCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred EEEecCCcccCEEEEEEEEecCCceEEEEEEEe
Confidence 999999999999999999999999988888877
No 166
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=99.81 E-value=4.8e-19 Score=212.48 Aligned_cols=265 Identities=18% Similarity=0.239 Sum_probs=182.6
Q ss_pred cCCCCCcccEEeee-----eCceEEEEecCCC--CCCCCccceEEEeeeecCCCceEEecceeeeceEEEecCCCCceee
Q psy7042 900 DRPHPPENLHADEF-----AGDSLTLYWTPPR--DNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFVRVRNLAIGSTYE 972 (2245)
Q Consensus 900 ~~P~~p~~l~~~~~-----~~~~~~l~W~~p~--~~~g~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~ 972 (2245)
++|+.|.++..... +++++.|+|+++. +.+ +.+.+|.|++........ . .......+.+|.|++.|.
T Consensus 2 ~~Ps~p~~~~~~~~~~~~~g~~sv~l~W~p~~~~~~~-g~i~~Y~V~~~~~~~~~~-~----~~~~~~~~~~l~p~t~Y~ 75 (290)
T 3l5i_A 2 DRPSKAPSFWYKIDPSHTQGYRTVQLVWKTLPPFEAN-GKILDYEVTLTRWKSHLQ-N----YTVNATKLTVNLTNDRYL 75 (290)
T ss_dssp CCCSSCCCEEEEEEECSSTTCEEEEEEECCCCHHHHC-SCEEEEEEEEEETTSCCE-E----EEESSSEEEEEECSSCEE
T ss_pred CCCCCCCceeEEecccccCCCceEEEEEccCCchhcC-CceEeEEEEEEeCCcCce-e----EecCCcEEEEEcCCceEE
Confidence 57888888766432 3689999999843 334 489999999997654432 1 122345678999999999
Q ss_pred EEEEEEeccccCCCccccCcccccCC-CCCCCCCCCCeeEeecCCeEEEEecCCCCCCCCccceEEEEEEecCCcc----
Q psy7042 973 FRVMAENQYGLSKPALTIDPIKAKHP-FDVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDK---- 1047 (2245)
Q Consensus 973 ~~v~a~n~~g~~~~s~~~~~~~~~t~-~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~---- 1047 (2245)
|+|.|.|..|.++++. +..... ...|.+|.++.+...+ +++.|+|++|.. ++.+|.|+|+..+...
T Consensus 76 ~~V~A~n~~G~s~~s~----~~~~~~~~~~~~p~~~~~~~~~~-~si~l~W~~p~~----~i~~Y~v~~~~~~~~~~~~~ 146 (290)
T 3l5i_A 76 ATLTVRNLVGKSDAAV----LTIPACDFQATHPVMDLKAFPKD-NMLWVEWTTPRE----SVKKYILEWCVLSDKAPCIT 146 (290)
T ss_dssp EEEEEEESSCBCCCEE----EEECCTTCCCCCCCEEEEEEEET-TEEEEEEECCSS----CCCEEEEEEEEECSSSCCCC
T ss_pred EEEEEEcCCCCCCCce----EEeecccccCCCccceeEEEeCC-CeEEEEEeCCCC----CCCcEEEEEEECCCCCCCCc
Confidence 9999999999887652 222211 1244566667776654 699999999874 5899999998765432
Q ss_pred -ceeccccccCCcceeEEEEeecccccCCccCchhhhhhhhhcccccccccccCCcEEEEEEEEEecCCCCCCCCCCcce
Q psy7042 1048 -WIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSDII 1126 (2245)
Q Consensus 1048 -~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~v~A~n~~G~~~~s~~~~~~ 1126 (2245)
|.... .... ..+.+.+|.+++.|.|+|+|.|..|.|... ..
T Consensus 147 ~~~~~~----~~~~------------------------------~~~~~~~L~p~t~Y~~~V~A~n~~g~g~~~-~~--- 188 (290)
T 3l5i_A 147 DWQQED----GTVH------------------------------RTYLRGNLAESKCYLITVTPVYADGPGSPE-SI--- 188 (290)
T ss_dssp EEEEEE----TTCS------------------------------EEECCSCCCTTCEEEEEEEEEETTEECCCE-EE---
T ss_pred CeEEcc----CCCc------------------------------ceEEecCcCCccEEEEEEEEEeCCcccccE-EE---
Confidence 21110 0000 012589999999999999999999876511 00
Q ss_pred eecCCCCCCccccCCCceeEEEEcCCeEEEEEEeeecCCCcceEEeCCeecCCCCcEEEEEccceEEEEecCccccccce
Q psy7042 1127 MCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATDSG 1206 (2245)
Q Consensus 1127 ~~~~~p~~p~~~~~~~~~~~~v~~~~~~~l~~~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1206 (2245)
...+..
T Consensus 189 ~~~t~~-------------------------------------------------------------------------- 194 (290)
T 3l5i_A 189 KAYLKQ-------------------------------------------------------------------------- 194 (290)
T ss_dssp EEESSC--------------------------------------------------------------------------
T ss_pred EeEccc--------------------------------------------------------------------------
Confidence 000000
Q ss_pred eEEEEEEcCCcceeEEEEEEEECCCCCCCCCceeeeccCCcEEEEecCCCC-CCCcceeeeEEEEeeccccceEEcccce
Q psy7042 1207 SYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLDVSDITPESCSLSWKPPLD-DGGSPITNYVVEKYESATGFWSKLSSFV 1285 (2245)
Q Consensus 1207 ~Y~~~a~n~~g~~~~s~~~~v~~~p~~p~~~~~~~~~~~~s~~l~W~~p~~-~~g~~i~~Y~v~~~~~~~~~~~~~~~~~ 1285 (2245)
..|..|+ .+.+...+.+++.|+|+++.. ..++.|.+|.|+|....+ .+.......
T Consensus 195 ----------------------~~P~~~p-~~~~~~~~~~sv~l~W~~~~~~~~~g~i~~Y~v~~~~~~~-~~~~~~~~~ 250 (290)
T 3l5i_A 195 ----------------------APPSKGP-TVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIG-NETAVNVDS 250 (290)
T ss_dssp ----------------------CCCSSCC-CEEEEEECSSCEEEEECCCCHHHHSSCCCEEEEEEEETTS-CCEEEEEET
T ss_pred ----------------------cCCCCCC-eeeEeeccCCEEEEEEcCCChhccCCEEEEEEEEEEeCCC-CeEEEEeCC
Confidence 1233232 466777788999999995432 234459999999887543 445555567
Q ss_pred ecceEEecCCCCCceEEEEEEEeccccCCCC
Q psy7042 1286 RSPAYDVFGLETNRQYRFRVRAENQYGVSEP 1316 (2245)
Q Consensus 1286 ~~~~~~l~~L~~~t~Y~~~v~A~n~~G~~~~ 1316 (2245)
..+++.|.+|.+++.|.|+|+|.|.+| |..
T Consensus 251 ~~~~~~~~~L~p~t~Y~~~V~A~n~~G-g~~ 280 (290)
T 3l5i_A 251 SHTEYTLSSLTSDTLYMVRMAAYTDEG-GKD 280 (290)
T ss_dssp TCSEEEECSCCTTCEEEEEEEEEETTE-EEE
T ss_pred CceEEEeCCCCCCCEEEEEEEEEeCCC-CCC
Confidence 788999999999999999999999999 543
No 167
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.81 E-value=7.9e-19 Score=193.63 Aligned_cols=175 Identities=14% Similarity=0.246 Sum_probs=146.1
Q ss_pred CCceeccCCceEEcCCCeEEEEEEecCcCCCeEEEeeCCEeccCCceEEEEecCc--EEEEEEeeeccCCCeEEEEEEec
Q psy7042 1697 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGG--VFRLHFNEVTDVDNGDYTCEAYN 1774 (2245)
Q Consensus 1697 ~p~~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~~~~l~~~~~~~~~~~~~--~~~L~i~~v~~~d~G~Y~C~~~n 1774 (2245)
+|.|...+.++.+.+|++++|.|.+.+.|.+.+.|++++..+....+..+...+. ...|.|.+++.+|+|.|+|.+.|
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~ 81 (182)
T 1rhf_A 2 GLKLMGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVED 81 (182)
T ss_dssp -----CCCEEEEEETTCCEEEEEEEESCSSCCEEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESS
T ss_pred CCEEEeCCcceEEeCCCcEEEEEEEeCCCCCeEEEEECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEEc
Confidence 4567777888999999999999999999999999999999998776666554432 46799999999999999999999
Q ss_pred Ccee-eEEEEEEEecCCCccccCCCceEEcCCCeEEEEEEEeccCCc-EEEEEECCEEeecCCceEEEEcCCeEEEEEcc
Q psy7042 1775 SVGF-AHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPM-EVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKE 1852 (2245)
Q Consensus 1775 ~~g~-~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~v~W~~~g~~l~~~~~~~~~~~~~~~~l~i~~ 1852 (2245)
..|. ....+.|.|..+|.+...+....+.+|+.+.|.|.+.|.|.+ .+.|+++|..+..... ....|.|.+
T Consensus 82 ~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~-------~~~~L~i~~ 154 (182)
T 1rhf_A 82 GGETEISQPVWLTVEGVPFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPAP-------SPSVLNVTG 154 (182)
T ss_dssp CTTCEECCCEEEEEECSCEEEECCCCEEECTTCCEEEEEEEECSSSCCEEEEEETTEECSCSEE-------SSEEEEECC
T ss_pred CCCcEEEEEEEEEEecCCeEEecCcceEecCCCEEEEEeEecCCCCCCEEEEEcCCeECCCCCC-------CceEEEEec
Confidence 8765 445789999999999888888899999999999999999999 9999999998854421 456899998
Q ss_pred cCcccceEEEEEEEcCCeeeE-EEEEEEE
Q psy7042 1853 IRKEDAGDYTVNLSNSSGSVS-GTFTINI 1880 (2245)
Q Consensus 1853 ~~~~d~G~Y~C~a~n~~g~~~-~~~~l~v 1880 (2245)
+ +|+|.|+|.|.|..|... ..+.|.|
T Consensus 155 ~--~d~G~Y~C~a~N~~g~~~s~~~~l~V 181 (182)
T 1rhf_A 155 V--TQSTMFSCEAHNLKGLASSRTATVHL 181 (182)
T ss_dssp C--SSCEEEEEEEEETTEEEECCCEEEEE
T ss_pred c--ccCeEEEEEEECCCCCcccceEEEEe
Confidence 8 589999999999999875 3777766
No 168
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.81 E-value=9.8e-19 Score=194.81 Aligned_cols=183 Identities=19% Similarity=0.238 Sum_probs=150.7
Q ss_pred CCceeccCCceEEcCCCeEEEEEEecCcC-CCeEEEee-CCEecc-CCceEEEEe-cCcEEEEEEeeeccCCCeEEEEEE
Q psy7042 1697 KPDFIVPLKDLVVPLGKLLTLQCEATGTP-VPKCRWLR-NGREIS-SGARYRVET-AGGVFRLHFNEVTDVDNGDYTCEA 1772 (2245)
Q Consensus 1697 ~p~~~~~~~~~~~~~G~~v~L~C~~~~~p-~~~v~W~~-~~~~l~-~~~~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~~ 1772 (2245)
++.+...+.+..+.+|++++|.|.+.+.+ .+.+.|++ +|..+. ...++.+.. ......|.|.+++.+|+|.|+|.+
T Consensus 2 p~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 81 (191)
T 1epf_A 2 VLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVV 81 (191)
T ss_dssp -CCEEEESSSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred ceEEEecCCCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEE
Confidence 45667778889999999999999999876 78999999 888876 445665543 356778999999999999999999
Q ss_pred ecCc-eeeEEEEEEEecCCCccccCCCceEEcCCCeEEEEEEEeccCCcEEEEEECCEEeecCCceEEEEcCCeEEEEEc
Q psy7042 1773 YNSV-GFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIK 1851 (2245)
Q Consensus 1773 ~n~~-g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~l~i~ 1851 (2245)
.|.. +.....+.|.|..+|.+...+....+.+|+.+.|.|.+.|.|.+.+.|+++|..+.......+....+ ..|.|.
T Consensus 82 ~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~-~~L~i~ 160 (191)
T 1epf_A 82 TAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSN-NYLQIR 160 (191)
T ss_dssp EETTTEEEEEEEEEEEECCSEEEECCSSEECCTTSCEEECCEEECSSCCEEEEEETTEEGGGGCCTTEEECTT-SCEEET
T ss_pred EcCCCcceEEEEEEEeecCceEecCCCcEeecCCCeEEEEEEECCCCCCEEEEEECCEEeeccCCceEEEecC-CeEEEC
Confidence 9987 56777889999999999888888899999999999999999999999999999886543222222222 269999
Q ss_pred ccCcccceEEEEEEEcCCeeeEEEEEEEE
Q psy7042 1852 EIRKEDAGDYTVNLSNSSGSVSGTFTINI 1880 (2245)
Q Consensus 1852 ~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v 1880 (2245)
++..+|+|.|+|.|.|..|.......+.|
T Consensus 161 ~~~~~d~G~Y~C~a~n~~~~~~~~~~i~v 189 (191)
T 1epf_A 161 GIKKTDEGTYRCEGRILARGEINFKDIQV 189 (191)
T ss_dssp TCCGGGCEEEEEEEEEGGGTEEEEEEEEE
T ss_pred CCChhhCEEEEEEEEEecceeEEEEEEEE
Confidence 99999999999999999876655555554
No 169
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.81 E-value=1.1e-19 Score=198.63 Aligned_cols=169 Identities=17% Similarity=0.166 Sum_probs=136.2
Q ss_pred CCCceecCCcceEEeCCCeEEEEEEEeeecCC-ceEEEECCeeccCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEEc
Q psy7042 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVP-KCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYN 167 (2245)
Q Consensus 89 ~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~-~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 167 (2245)
++|.|...|..+.+.+|+.++|.|.+.+.|.+ .+.|+|+|..+... +. .|.|.+++.+|+|.|+|.|.|
T Consensus 3 ~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~~~--------~~--~L~i~~v~~~d~G~Y~C~~~~ 72 (176)
T 1f2q_A 3 QKPKVSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEET--------NS--SLNIVNAKFEDSGEYKCQHQQ 72 (176)
T ss_dssp -CCCCEEESSCSEEETTCCEEEECCTTCC----CCEEEETTEECSCC--------SS--EEEECSCCGGGCEEEEEECTT
T ss_pred CCCEEEcCCCCcceecCCcEEEEEeCCCCCCcceEEEEECCeECCCC--------ce--EEEEeccceecCEEEEEEcCC
Confidence 58899999999999999999999999988875 69999999988743 22 599999999999999999998
Q ss_pred CcccceeEEEEEecCCCeeecCCCceEEcCCCeEEEEEEE-ecCCCceEEEeeCceeeecCCceEEEEeCCeEEEEEccc
Q psy7042 168 SVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFY-AGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEI 246 (2245)
Q Consensus 168 ~~g~~~~~~~l~V~~~P~~~~~~~~~~v~~G~~~~l~C~~-~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~ 246 (2245)
..+ +..+.|.|..++.+...+ ...+.+|+.++|.|.+ .+.|.+.+.|+|+|..+.... ....|.|.++
T Consensus 73 ~~~--s~~~~l~V~~~~~~~~~~-~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~--------~~~~L~i~~v 141 (176)
T 1f2q_A 73 VNE--SEPVYLEVFSDWLLLQAS-AEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYWY--------ENHNISITNA 141 (176)
T ss_dssp SSC--CCCEEEEEECSSEEEEES-CSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECCSCC--------CSSEEEESSC
T ss_pred ccc--cccEEEEEeCcceeecCC-cceeeCCCCEEEEEEecCCCCceEEEEEECCEEEeeec--------CCCeEEECCC
Confidence 665 445677777666554443 3578899999999999 467788999999999885322 2237999999
Q ss_pred CccCceeEEEEEEcCCc-ceEEEEEEEEecCCC
Q psy7042 247 RKEDAGDYTVNLSNSSG-SVSGTFTINITGLPG 278 (2245)
Q Consensus 247 ~~~d~G~Y~C~a~n~~g-~~~~~~~l~V~~~p~ 278 (2245)
..+|+|.|+|.|.|..+ ..+..+.|.|..+|.
T Consensus 142 ~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~p~ 174 (176)
T 1f2q_A 142 TVEDSGTYYCTGKVWQLDYESEPLNITVIKAPR 174 (176)
T ss_dssp CGGGCEEEEEEEEETTEEEECCCEEEEEECSCC
T ss_pred CcccCEEEEEEEEeCCcceEecCEEEEEecCCC
Confidence 99999999999999754 456678999988774
No 170
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.80 E-value=4.7e-20 Score=210.50 Aligned_cols=180 Identities=18% Similarity=0.232 Sum_probs=141.6
Q ss_pred eecCCcceEEeCCCeEEEEEEEeeec----CCceEEEE----------------CCeeccC-----CCeEEEEE---cCc
Q psy7042 93 FIVPLKDLVVPLGKLLTLQCEATGTP----VPKCRWLR----------------NGREISS-----GARYRVET---AGG 144 (2245)
Q Consensus 93 ~~~~~~~~~v~~G~~v~L~C~~~g~p----~~~i~W~~----------------~g~~l~~-----~~~~~~~~---~~~ 144 (2245)
|+.++..+.+.+|+.++|.|.+.+.| .+.|.|+| ++..+.. ..|+.+.. ..+
T Consensus 3 i~~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 82 (214)
T 3jz7_A 3 ITTPEQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSG 82 (214)
T ss_dssp ---CEEEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGT
T ss_pred eecCCceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCC
Confidence 34456678899999999999999877 46899998 4444432 33555533 223
Q ss_pred EEEEEEeeeccCCCeEEEEEEEcCcccceeEEEEEecCCCeeecCCCceEEcCCCeEEEEEEE-ecCCCceEEEeeCc--
Q psy7042 145 VFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFY-AGDQPMEVSLTKNG-- 221 (2245)
Q Consensus 145 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~P~~~~~~~~~~v~~G~~~~l~C~~-~g~p~~~i~W~~~g-- 221 (2245)
..+|.|.+++.+|+|.|+|.|.|..|.....+.|.|..+|.+...+....+.+|+.++|.|.+ .|.|.+.|.|+|++
T Consensus 83 ~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~~~~ 162 (214)
T 3jz7_A 83 DASINVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSGTRCFVDGSEEIGNDFKLKCEPKEGSLPLQFEWQKLSDS 162 (214)
T ss_dssp BCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCBSCEEEEESCCBTTCCEEEEEECSBCCSSCEEEEEECSTT
T ss_pred cccEEEccCChhhCeEEEEEEEeCCCccccEEEEEEEcCCCCceeeeecceecCCcEEEEecCCCCCCCCEEEEEECCCC
Confidence 456999999999999999999999998888999999999987766655668899999999999 89999999999954
Q ss_pred eeeecCCceEEEEeCCeEEEEEcccCccCceeEEEEEEcCCcceEEEEEEEEecC
Q psy7042 222 RVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGL 276 (2245)
Q Consensus 222 ~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 276 (2245)
..+...... ......|.|.++..+|+|.|+|.|.|..|..+.++.|.|..|
T Consensus 163 ~~~~~~~~~----~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~P 213 (214)
T 3jz7_A 163 QTMPTPWLA----EMTSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVVPP 213 (214)
T ss_dssp CCCCGGGGG----GTTSSEEEECSCCGGGCEEEEEEEECSSCEEEEEEEECCBCC
T ss_pred CccCcccee----ccCCCEEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEEEeCC
Confidence 343322111 112237999999999999999999999999999999998844
No 171
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.80 E-value=1.1e-19 Score=204.77 Aligned_cols=182 Identities=13% Similarity=0.052 Sum_probs=136.6
Q ss_pred CCCCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECCeeccCCCeEEEEEcCcEE--EEEEeeeccCCCeEEEEEE
Q psy7042 88 GEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVF--RLHFNEVTDVDNGDYTCEA 165 (2245)
Q Consensus 88 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~a 165 (2245)
..+|.|...|. ..+.+|++|+|.|.+.+ +.+.|.|+|+|..+....+. ........ .|.|.+++.+|+|.|+|.|
T Consensus 7 ~~~P~i~~~p~-~~v~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~~~~-~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 83 (218)
T 1uct_A 7 FPMPFISAKSS-PVIPLDGSVKIQCQAIR-EAYLTQLMIIKNSTYREIGR-RLKFWNETDPEFVIDHMDANKAGRYQCQY 83 (218)
T ss_dssp SCCCCEEESSC-SEEETTCCEEEEECCCT-TCSEEEEEEEETTEEEECSE-ECC----CCCEEEECSCCGGGCEEEEEEE
T ss_pred CCCCEEEecCC-CccCCCCCEEEEEEcCC-CCCEEEEEECCCcccccccc-cCCCCcceeeEEEEcccccccCEEEEEEE
Confidence 36889998887 58999999999999987 67899999998776532211 10111122 5999999999999999999
Q ss_pred EcCcccc--eeEEEEEecC---CCeeecCCCceEEcCCCeEEEEEEEecCCCceEEEeeCceeeecCCceEEEEeCCeEE
Q psy7042 166 YNSVGFA--HTSSRVKIGT---PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYII 240 (2245)
Q Consensus 166 ~n~~g~~--~~~~~l~V~~---~P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~ 240 (2245)
.|..|.. +..+.|.|.. +|.+...| ...+.+|+.++|.|.+.+.|.+.+.|+|+|..+... .........
T Consensus 84 ~n~~~~~~~s~~~~l~V~~~~~~P~i~~~p-~~~v~~G~~v~L~C~~~~~~~~~~~W~k~g~~~~~~----~~~~~~~~~ 158 (218)
T 1uct_A 84 RIGHYRFRYSDTLELVVTGLYGKPFLSADR-GLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQ----HQSGEHPAN 158 (218)
T ss_dssp EETTTEEEECCCEEEEEECSSCCCEEEESS-CSEECTTCCCEEEEECSSSCCSEEEEEETTCSSCCS----EEECSSSEE
T ss_pred EcCCCceeecCCEEEEEcCcccCCEEEeCC-CCccCCCCCEEEEEeCCCCCCCEEEEEECCCccccc----ccCCCccCE
Confidence 9986533 3356777764 56776666 457899999999998777888999999999877542 112344568
Q ss_pred EEEcccCccCceeEEEEEEcCCc-----ceEEEEEEEEecCC
Q psy7042 241 IFIKEIRKEDAGDYTVNLSNSSG-----SVSGTFTINITGLP 277 (2245)
Q Consensus 241 L~i~~~~~~d~G~Y~C~a~n~~g-----~~~~~~~l~V~~~p 277 (2245)
|.|.+++.+|+|.|+|.|.|..+ ..+..+.|.|.+.+
T Consensus 159 L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g~~ 200 (218)
T 1uct_A 159 FSLGPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTDSI 200 (218)
T ss_dssp EECCSCCGGGCEEEEEEEECTTSTTEECCCCCCEEEEEC---
T ss_pred EEEccCCcccCEEEEEEEEcCCCCCcCCCCCCcEEEEEecCC
Confidence 99999999999999999998642 34567888887654
No 172
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.80 E-value=5.4e-20 Score=205.07 Aligned_cols=170 Identities=15% Similarity=0.168 Sum_probs=120.1
Q ss_pred CCCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECCeeccCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEEcC
Q psy7042 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNS 168 (2245)
Q Consensus 89 ~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 168 (2245)
.+|.|...|.. .+.+|++++|.|.+.+.|. .+.|+|+|..+....+ ..........|.|.+++.+|+|.|+|.|.|.
T Consensus 4 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~-~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 80 (196)
T 2d3v_A 4 SKATLWAEPGS-VISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDTQ-NPLEPKNKARFSIPSMTEHHAGRYRCYYYSP 80 (196)
T ss_dssp CBCEEEEESCS-EEETTCCEEEEEECCTTCC-EEEEEETTCSSCSEEE-CCCSSTTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCEEEeCCCC-cccCCCeEEEEEeCCCCCc-EEEEEECCCCCCcccc-cccCCccccEEEeccCChhHCeEEEEEEeCC
Confidence 57889888874 8999999999999988776 8999999988754221 0111234457999999999999999999998
Q ss_pred cccc--eeEEEEEecC---CCeeecCCCceEEcCCCeEEEEEEEecCCCceEEEeeCceeeecCCce-EEEE-eCCeEEE
Q psy7042 169 VGFA--HTSSRVKIGT---PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRF-KFTV-LDDYIII 241 (2245)
Q Consensus 169 ~g~~--~~~~~l~V~~---~P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~-~~~~-~~~~~~L 241 (2245)
.|.. +..+.|.|.. +|.+...+. ..+.+|+.++|.|.+.+.| +.+.|+|+|..+...... .... ......|
T Consensus 81 ~g~~~~s~~~~l~V~~~~~~p~i~~~~~-~~v~~G~~v~L~C~~~~~p-~~~~W~k~g~~~~~~~~~~~~~~~~~~~~~L 158 (196)
T 2d3v_A 81 AGWSEPSDPLELVVTGFYNKPTLSALPS-PVVTSGENVTLQCGSRLRF-DRFILTEEGDHKLSWTLDSQLTPSGQFQALF 158 (196)
T ss_dssp TEECBCCCCEEEEEECSSCCCEEEC------------CEEEEEESSCC-SEEEEEEC---CCEEEEECEECTTSCEEEEE
T ss_pred CCcCCcCccEEEEecCCCCCCeEEccCC-ccccCCCcEEEEEEcCCCC-CEEEEEccCCcccccccccccccCCCceeEE
Confidence 7643 3457788876 567765553 5789999999999999988 899999999887432211 1111 1233689
Q ss_pred EEcccCccCceeEEEEEEcCCc
Q psy7042 242 FIKEIRKEDAGDYTVNLSNSSG 263 (2245)
Q Consensus 242 ~i~~~~~~d~G~Y~C~a~n~~g 263 (2245)
.|.+++.+|+|.|+|.|.|..+
T Consensus 159 ~I~~v~~~D~G~Y~C~a~n~~~ 180 (196)
T 2d3v_A 159 PVGPVTPSHRWMLRCYGSRRHI 180 (196)
T ss_dssp ECCCCBTTBCEEEEEEEEETTE
T ss_pred EeeecCcccCeeEEEEEEccCC
Confidence 9999999999999999999865
No 173
>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A*
Probab=99.80 E-value=3e-19 Score=224.54 Aligned_cols=320 Identities=16% Similarity=0.165 Sum_probs=168.1
Q ss_pred CCCCCcccEEeeeeCceEEEEecCCCCCCCCccceEEEeeeecCCCceEEec--ceee--eceEEEecCCCCceeeEEEE
Q psy7042 901 RPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVS--SYVT--TPFVRVRNLAIGSTYEFRVM 976 (2245)
Q Consensus 901 ~P~~p~~l~~~~~~~~~~~l~W~~p~~~~g~~i~~y~i~~~~~~~~~~~~~~--~~~~--~~~~~i~~L~p~~~y~~~v~ 976 (2245)
.+.+|+++.+... +.++.|+|+++.+.++ .+. |.|+|+..+...|..+. .... ...++..+|.+++.|.|+|+
T Consensus 7 ~l~~P~nv~~~~~-~~~~~L~W~p~~~~~~-~i~-Y~V~y~~~~~~~W~~~~~c~~~~~~~~~~t~~~l~~~~~Y~~rV~ 83 (414)
T 3se4_A 7 NLKSPQKVEVDII-DDNFILRWNRSDESVG-NVT-FSFDYQKTGMDNWIKLSGCQNITSTKCNFSSLKLNVYEEIKLRIR 83 (414)
T ss_dssp ----CCCCCEEEE-TTEEEEC-----------CE-EEEEEEESSCCCCEEEEEEEEESCSCEECCSSCCCTTSCEEEEEE
T ss_pred CCCCCceeEEEEE-CCceEEEEcCCCCCCC-CeE-EEEEEEECCCCCcEECcCccCCCCCEEECCcccccCCCcEEEEEE
Confidence 3467899999886 4568999999977554 677 99999988777887542 2223 33455567899999999999
Q ss_pred EEeccccCCCccccCcccccCCCCCCCCCCCCeeEeecCCeEEEEecCCCCCCC------CccceEEEEEEecCCcccee
Q psy7042 977 AENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSISLVWSKPRHDGG------SPIQRYIVEKRLISDDKWIK 1050 (2245)
Q Consensus 977 a~n~~g~~~~s~~~~~~~~~t~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~------~~i~~y~v~~~~~~~~~~~~ 1050 (2245)
|.| .+.+.++........ ....+++|. +.+. ...++|.|+|. |...++ +.+.+|.|.|...+......
T Consensus 84 A~n-~~~S~~s~~~~~~~~--~~~~~~pP~-v~~~-~~~~si~v~w~-P~~~~g~~~~~~~~~~~Y~v~y~~~~~~~~~~ 157 (414)
T 3se4_A 84 AEK-ENTSSWYEVDSFTPF--RKAQIGPPE-VHLE-AEDKAIVIHIS-PGTKDSVMWALDGLSFTYSLVIWKNSSGVEER 157 (414)
T ss_dssp EEE-TTEEEEEECCCBCHH--HHCCCCCCE-EEEE-ECSSCEEEEEE-CSSSSCTTTGGGGSSCEEEEEEEETTTCCEEE
T ss_pred Eee-CCcCCCEecCceeec--ccceeCCCe-EEEE-EcCCEEEEEEE-cCCCCCceeeeecCcEEEEEEEEECCCCceEE
Confidence 999 665555421111111 112234454 5544 44578999999 654433 35789999998776544221
Q ss_pred ccccccCCcceeEEEEeecccccCCccCchhhhhhhhhcccccccccccCCcEEEEEEEEEec--CCCCCCCCCCcceee
Q psy7042 1051 ASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNA--AGQGPWSSSSDIIMC 1128 (2245)
Q Consensus 1051 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~v~A~n~--~G~~~~s~~~~~~~~ 1128 (2245)
.. .... .++|.+|.|++.|.|+|+|.|. .|.|++|....+.+.
T Consensus 158 ~~-----~~~~------------------------------~~~i~~L~p~t~Y~~~V~A~n~~~~g~g~~S~~~~~~t~ 202 (414)
T 3se4_A 158 IE-----NIYS------------------------------RHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTT 202 (414)
T ss_dssp EE-----EECS------------------------------EEEECCCCTTCEEEEEEEEECTTTCCEEEECCCEEEECC
T ss_pred Ee-----cCCc------------------------------EEEEcCCCCCCeEEEEEEEEeccCCCCCccCcccccccc
Confidence 10 0001 1269999999999999999994 565554432221111
Q ss_pred cCCCCCCccccCCCceeEEEEcCCeEEEEEEeeecCCCcceEEeCCeecCCCCcEEEEEccceEEEEecCccccccceeE
Q psy7042 1129 CAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATDSGSY 1208 (2245)
Q Consensus 1129 ~~~p~~p~~~~~~~~~~~~v~~~~~~~l~~~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y 1208 (2245)
.
T Consensus 203 ~------------------------------------------------------------------------------- 203 (414)
T 3se4_A 203 V------------------------------------------------------------------------------- 203 (414)
T ss_dssp S-------------------------------------------------------------------------------
T ss_pred c-------------------------------------------------------------------------------
Confidence 1
Q ss_pred EEEEEcCCcceeEEEEEEEECCCCCCCCCceeeeccCCcEEEEecCCCCCCCcceeeeEEEEeec--------cccceEE
Q psy7042 1209 TIQLVNTVGSDSASCKVYVVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYES--------ATGFWSK 1280 (2245)
Q Consensus 1209 ~~~a~n~~g~~~~s~~~~v~~~p~~p~~~~~~~~~~~~s~~l~W~~p~~~~g~~i~~Y~v~~~~~--------~~~~~~~ 1280 (2245)
..|.+++.++.+...+ .++.|.|++|.. ..+|.|+|... ....|..
T Consensus 204 --------------------~~~~~~P~~v~~~~~~-~~~~l~W~pp~~-----~~~Y~v~y~~~~~~~~~~~~~~~w~~ 257 (414)
T 3se4_A 204 --------------------ENELPPPENIEVSVQN-QNYVLKWDYTYA-----NMTFQVQWLHAFLKRNPGNHLYKWKQ 257 (414)
T ss_dssp --------------------CCSSCCCEEEEEEEET-TEEEEEEECSSS-----SCEEEEEEEESGGGSCCCC--CCCCB
T ss_pred --------------------ccccCCCCccEEEEec-CCeEEEECCCCC-----CeEEEEEEEehhccccccccccCceE
Confidence 1122333455555443 568899998742 34999999863 2456665
Q ss_pred cc--cceecceEEec-CCCCCceEEEEEEEeccccCCCCcccCCcccccCCCC-CCCCCCCCeeeeccCCcEEEEeeCCC
Q psy7042 1281 LS--SFVRSPAYDVF-GLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFT-VPDPPGQPQIVDWDTNNATLMWDRPR 1356 (2245)
Q Consensus 1281 ~~--~~~~~~~~~l~-~L~~~t~Y~~~v~A~n~~G~~~~s~~~~~~~~~~~~~-~p~~p~~~~~~~~~~~s~~l~W~~p~ 1356 (2245)
+. .......+.+. +|.+++.|.++|+|.|..|.|+.+... ...+... .+++|. +.+.. ..+++.|+|.+|.
T Consensus 258 ~~~~~~~~~~~~~~t~~l~~~~~Y~~rV~A~n~~g~s~~s~~~---~~~t~~~~~~~pP~-l~~~~-~~~si~v~W~~P~ 332 (414)
T 3se4_A 258 IPDCENVKTTQCVFPQNVFQKGIYLLRVQASDGNNTSFWSEEI---KFDTEIQAFLLPPV-FNIRS-LSDSFHIYIGAPK 332 (414)
T ss_dssp CSTTTTBSSSEEEEEGGGSCSSEEEEEEEEECSSSEEEECCCE---EEETTCC---------------------------
T ss_pred CCCccCCCCCEEcCCcccccCccEEEEEEEecCCCcccccccc---cccchhccccCCCe-EEEEE-CCCeEEEEEECCC
Confidence 42 23445667776 699999999999999999998765432 2223333 456666 76663 4689999999988
Q ss_pred CCCCc-----cceeeEEEEecCC
Q psy7042 1357 TDGGS-----KIQGYKMLLKTPT 1374 (2245)
Q Consensus 1357 ~~~g~-----~i~~y~i~~~~~~ 1374 (2245)
..+|. .+.+|.|.|++.+
T Consensus 333 ~~~~~~~~~~~~~~Y~v~y~~~~ 355 (414)
T 3se4_A 333 QSGNTPVIQDYPLIYEIIFWENT 355 (414)
T ss_dssp -----------------------
T ss_pred CccccchhhcCCeEEEEEEEECC
Confidence 76542 5789999887654
No 174
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.80 E-value=3.1e-19 Score=201.17 Aligned_cols=178 Identities=21% Similarity=0.231 Sum_probs=141.8
Q ss_pred CceecCCcceEEeCCCeEEEEEE-EeeecC-CceEEEECCeecc--CCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEE
Q psy7042 91 PDFIVPLKDLVVPLGKLLTLQCE-ATGTPV-PKCRWLRNGREIS--SGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAY 166 (2245)
Q Consensus 91 P~~~~~~~~~~v~~G~~v~L~C~-~~g~p~-~~i~W~~~g~~l~--~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 166 (2245)
+.+..++..+.+.+|+.++|.|. +.+.|. +.+.|+|++..+. ...+..+...++ .|.|.+++.+|+|.|+|.|.
T Consensus 9 ~~~~~~~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~~~~~~--~L~i~~v~~~d~G~Y~C~~~ 86 (201)
T 3s97_C 9 PFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNG--NLYIANVEASDKGNYSCFVS 86 (201)
T ss_dssp CCCSSCCCCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEECTTTC--CEEESSCCGGGCEEEEEEEE
T ss_pred ccCcCCCceEEEECCCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEEEcCCC--eEEECcCCcccCeEEEEEEE
Confidence 33344667889999999999999 889998 9999999998875 233333333333 59999999999999999999
Q ss_pred cCccccee---EEEEEec-------CCCeeecCCCceEEcCCCeEEEEEEEecCCCceEEEeeCceeeecCCceEEEEeC
Q psy7042 167 NSVGFAHT---SSRVKIG-------TPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLD 236 (2245)
Q Consensus 167 n~~g~~~~---~~~l~V~-------~~P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~ 236 (2245)
|..+.... ...+.+. .+|.+...+....+.+|+.+.|.|.+.|.|.+.|.|++++..+..... +..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~--~~~-- 162 (201)
T 3s97_C 87 SPSITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAE--IST-- 162 (201)
T ss_dssp EGGGTEEEECCCEEEEEECCSSCCCEEEEEEEECCCEEEETTCCEEEEEEEEEESCCEEEEEETTBCCCTTCE--EET--
T ss_pred ecCCCcchhhcccceeeccccccCCCCCceEecCCceEEecCCcEEEEEEccCCCCCceEEEeCCCcCCCcee--ecC--
Confidence 97765543 2333332 356666666688999999999999999999999999999998765422 222
Q ss_pred CeEEEEEcccCccCceeEEEEEEcCCcceEEEEEEEEe
Q psy7042 237 DYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINIT 274 (2245)
Q Consensus 237 ~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 274 (2245)
....|.|.++..+|+|.|+|.|.|..|..+.++.|.|.
T Consensus 163 ~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 200 (201)
T 3s97_C 163 SGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQ 200 (201)
T ss_dssp TTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCCEEEEccCChhhCEEEEEEEEecCCceeeeEEEEEe
Confidence 23479999999999999999999999999999999886
No 175
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.79 E-value=4.5e-19 Score=201.49 Aligned_cols=179 Identities=12% Similarity=0.234 Sum_probs=139.7
Q ss_pred CceecCCcceEEeCCCeEEEEEEEeeecCCceEEEE--CCeecc------------CCCeEEEEEcCcEEEEEEeeeccC
Q psy7042 91 PDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLR--NGREIS------------SGARYRVETAGGVFRLHFNEVTDV 156 (2245)
Q Consensus 91 P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~--~g~~l~------------~~~~~~~~~~~~~~~L~i~~~~~~ 156 (2245)
|.++.+| .+.+.+|+.++|.|.+.+.|.+.|.|+| ++.... ..+|+.+...++...|.|.+++.+
T Consensus 2 ~~v~~~~-~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 80 (213)
T 3mj8_L 2 YTLTQPP-LVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAG 80 (213)
T ss_dssp CCBBCCS-EEEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGG
T ss_pred eeEEeCC-cEEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChh
Confidence 5566777 8899999999999999999999999998 222111 235787777777889999999999
Q ss_pred CCeEEEEEEEcCcc---cceeEEEEEec----CCCeeecCCCceEEcCCCeEEEEEEEecC-CC-ceEEEeeCceeeecC
Q psy7042 157 DNGDYTCEAYNSVG---FAHTSSRVKIG----TPPRIDRMPNALYIPEGDNTKVKIFYAGD-QP-MEVSLTKNGRVVQSD 227 (2245)
Q Consensus 157 d~G~Y~C~a~n~~g---~~~~~~~l~V~----~~P~~~~~~~~~~v~~G~~~~l~C~~~g~-p~-~~i~W~~~g~~l~~~ 227 (2245)
|+|.|+|.|.|..+ .....+.|.|. .+|.+...+....+.+|+.++|.|.+.|. |+ +.|.|+|||..+..+
T Consensus 81 D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~ 160 (213)
T 3mj8_L 81 DEADYYCQSWDGTNSAWVFGSGTKVTVLGQPNAAPSVTLFPPSSEELKTNQATLVCMINGFYPADVAVTWEADGTPITQG 160 (213)
T ss_dssp GCEEEEEEEEETTTTEEEEBCCEEEEEECSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTT
T ss_pred hCEEEEEEeccCCcceeEEcCceEEEEeCCCCCCCeEEccCCCcccccCCcEEEEEEeeceeCCCeEEEEEcCCcccCCC
Confidence 99999999999887 34556778887 67888777766666799999999999885 44 499999999998653
Q ss_pred Cce--EEEEeC---CeEEEEEcccCccCceeEEEEEEcCCcceEEEEE
Q psy7042 228 DRF--KFTVLD---DYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFT 270 (2245)
Q Consensus 228 ~~~--~~~~~~---~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 270 (2245)
... .....+ ....|.|.++..+|+|.|+|.|.|..+....++.
T Consensus 161 ~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~ 208 (213)
T 3mj8_L 161 VKTTQPSKSDSKYMATSYLTMTADAWKSRNTFICKVTHGGNTVEKSLS 208 (213)
T ss_dssp EEECCCEEETTEEEEEEEEEEESHHHHSCSCEEEEEEETTEEEEEEEC
T ss_pred cccCCcCccCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCccEEeeec
Confidence 110 011111 1245999999999999999999999877665553
No 176
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.79 E-value=4.2e-20 Score=209.88 Aligned_cols=182 Identities=18% Similarity=0.313 Sum_probs=145.6
Q ss_pred CCCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECCeec------------cCCCeEEEEEcCcEEEEEEeeeccC
Q psy7042 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREI------------SSGARYRVETAGGVFRLHFNEVTDV 156 (2245)
Q Consensus 89 ~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l------------~~~~~~~~~~~~~~~~L~i~~~~~~ 156 (2245)
.++.|..++..+.+.+|+.++|.|.+.+.|.+.|.|+|++..+ ....++.+.. ..|.|.+++.+
T Consensus 3 ~~~~i~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~----~~L~i~~~~~~ 78 (209)
T 1nbq_A 3 GSVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLP----TGITFKSVTRE 78 (209)
T ss_dssp CCCEEECSCSBCCEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEET----TEEECSCCCTT
T ss_pred ceEEEEcCCCceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEeec----cEEEEeeCCHH
Confidence 3567778888899999999999999999999999999987652 1233444432 35999999999
Q ss_pred CCeEEEEEEEcCcc--cceeEEEEEecCCCeeecCCCceEEcCCCeEEEEEEE-ecCCCceEEEeeCceeeecCCce---
Q psy7042 157 DNGDYTCEAYNSVG--FAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFY-AGDQPMEVSLTKNGRVVQSDDRF--- 230 (2245)
Q Consensus 157 d~G~Y~C~a~n~~g--~~~~~~~l~V~~~P~~~~~~~~~~v~~G~~~~l~C~~-~g~p~~~i~W~~~g~~l~~~~~~--- 230 (2245)
|+|.|+|.|.|..| ..+..+.|.|..+|.+...+....+.+|+.+.|.|.+ .|.|.+.+.|+|+|..+......
T Consensus 79 d~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~ 158 (209)
T 1nbq_A 79 DTGTYTCMVSEEGGNSYGEVKVKLIVLVPPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRA 158 (209)
T ss_dssp SCSEEEEEEEETTSSCEECCEEECCEEBCCCCCCCCCBSEEETTSCEEECCCCCSCBSCCEEEEEETTCCCCSCSSSSSS
T ss_pred HCcEEEEEEecCCCCccceEEEEEEEecCCcCCCcccccceecCCEEEEEEeCCCCCCCceeEEEECCeeCCCcccccee
Confidence 99999999999866 3445778889999988877777889999999999997 89999999999999988754321
Q ss_pred ----EEEEeCCeEEEEEcccCccCceeEEEEEEcCCcce--EEEEEEEEe
Q psy7042 231 ----KFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV--SGTFTINIT 274 (2245)
Q Consensus 231 ----~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~--~~~~~l~V~ 274 (2245)
..........|.|.++..+|+|.|+|.|.|..|.. +..+.|.|.
T Consensus 159 ~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~v~l~V~ 208 (209)
T 1nbq_A 159 FSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPMTSNAVRMEAV 208 (209)
T ss_dssp CTTCCCCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCCEECCCBCCEEE
T ss_pred eeccceEEcCCcceEEEEeccccCCeEEEEEEeCCcCcccccccEEEEEe
Confidence 11112234579999999999999999999999987 445555553
No 177
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.79 E-value=1.5e-19 Score=202.09 Aligned_cols=180 Identities=15% Similarity=0.151 Sum_probs=130.4
Q ss_pred CCCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECCeeccCCCeE-EEEEcCcEEEEEEeeeccCCCeEEEEEEEc
Q psy7042 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARY-RVETAGGVFRLHFNEVTDVDNGDYTCEAYN 167 (2245)
Q Consensus 89 ~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~~~~-~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 167 (2245)
++|.|...|. ..+.+|++++|.|.+.+.|. .+.|+|+|..+....+. .....++ .|.|.+++.+|+|.|+|.|.|
T Consensus 4 ~~P~i~~~p~-~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~--~L~i~~v~~~D~G~Y~C~a~n 79 (198)
T 1ugn_A 4 PKPTLWAEPG-SVITQGSPVTLRCQGGQETQ-EYRLYREKKTAPWITRIPQELVKKG--QFPIPSITWEHTGRYRCYYGS 79 (198)
T ss_dssp CCCEEEEESC-SEEETTCCEEEEEECCTTCC-CEEEEESSSCCHHHHTSCHHHHTTT--EEEESSCCGGGCEEEEEEEEE
T ss_pred CCCeEeccCC-CcccCCCcEEEEEEecCCCc-EEEEEECCccccccccccccCCccc--EEEECCCCHHHCeEEEEEEEC
Confidence 5888988877 48999999999999998776 79999999877421110 0011222 599999999999999999999
Q ss_pred Cc-c--cceeEEEEEecC---CCeeecCCCceEEcCCCeEEEEEEEecCCCceEEEeeCceeeecCCc-eEEEE-eCCeE
Q psy7042 168 SV-G--FAHTSSRVKIGT---PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDR-FKFTV-LDDYI 239 (2245)
Q Consensus 168 ~~-g--~~~~~~~l~V~~---~P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~-~~~~~-~~~~~ 239 (2245)
.. | ..+..+.|.|.. +|.+...+ ...+.+|+.++|.|.+.+. .+.+.|+|+|..+..... +.... .+...
T Consensus 80 ~~~g~~~~s~~~~l~V~~~~~~p~i~~~~-~~~v~~G~~v~L~C~~~~~-~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~ 157 (198)
T 1ugn_A 80 DTAGRSESSDPLELVVTGAYIKPTLSAQP-SPVVNSGGNVTLQCDSQVA-FDGFILCKEGEDEHPQCLNSQPHARGSSRA 157 (198)
T ss_dssp TTTEECCCCCCEEEEEECSSCCCEEEEES-CSEEETTCCEEEEEECSSC-CSEEEEEEC------CEEEC------CCEE
T ss_pred CCCCcccCCccEEEEEcccccCCccccCC-ccccCCCCcEEEEEecCCC-CcEEEEEECCCccCCccccccccCCCccee
Confidence 87 5 335567888877 46665554 3678899999999999988 779999999998754321 11111 22356
Q ss_pred EEEEcccCccCceeEEEEEEcCCcc-----eEEEEEEEEe
Q psy7042 240 IIFIKEIRKEDAGDYTVNLSNSSGS-----VSGTFTINIT 274 (2245)
Q Consensus 240 ~L~i~~~~~~d~G~Y~C~a~n~~g~-----~~~~~~l~V~ 274 (2245)
.|.|.++..+|+|.|+|.|.|..+. .+..+.|.|.
T Consensus 158 ~L~i~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~ 197 (198)
T 1ugn_A 158 IFSVGPVSPSRRWWYRCYAYDSNSPYEWSLPSDLLELLVL 197 (198)
T ss_dssp EEEECCCCTTSCEEEEEEEECTTSTTEECCCCCCEEEEEE
T ss_pred EEEecccCcccCeEEEEEEEeCCCCccccCcCceEEEEec
Confidence 8999999999999999999998752 2556666664
No 178
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.79 E-value=1.2e-18 Score=189.62 Aligned_cols=164 Identities=18% Similarity=0.239 Sum_probs=134.3
Q ss_pred CCCceecCCcceEEeCCCeEEEEEEEeeec-CCceEEEECCeeccCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEEc
Q psy7042 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTP-VPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYN 167 (2245)
Q Consensus 89 ~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p-~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 167 (2245)
++|.+...|....+.+|+.++|.|.+.+.| .+.+.|+|+|..+..... .+.|.+++.+|+|.|+|.|.|
T Consensus 3 p~p~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~~~~----------~~~~~~~~~~d~G~Y~C~~~~ 72 (170)
T 3ry4_A 3 PKAVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTHTQ----------PSYRFKANNNDSGEYTCQTGQ 72 (170)
T ss_dssp CBCEEEEESCCSEEETTCEEEEEEESCCCSSSSCEEEEETTEECTTCCS----------SEEEEECCGGGCEEEEEEETT
T ss_pred CCCEEEeCCCCeEEECCCcEEEEEEecCCCCcceEEEEECCeEcccCcc----------ceEEEecccccCeEEEEEEeC
Confidence 567888888888999999999999999887 678999999999876421 266789999999999999997
Q ss_pred CcccceeEEEEEecCCCeeecCCCceEEcCCCeEEEEEEE-ecCCCceEEEeeCceeeecCCceEEEEeCCeEEEEEccc
Q psy7042 168 SVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFY-AGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEI 246 (2245)
Q Consensus 168 ~~g~~~~~~~l~V~~~P~~~~~~~~~~v~~G~~~~l~C~~-~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~ 246 (2245)
..+ +..+.|.|..+|.+...+ ...+.+|+.+.|.|.+ .+.|.+.+.|+|+|..+.... ....|.|.++
T Consensus 73 ~~~--s~~~~l~v~~~~~~~~~~-~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~--------~~~~L~i~~v 141 (170)
T 3ry4_A 73 TSL--SDPVHLTVLFEWLVLQTP-HLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKFSH--------LDPTFSIPQA 141 (170)
T ss_dssp SBC--CCCEEEEEECCSEEEECS-CSEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEEES--------SCCEEEESSC
T ss_pred CCc--eEeEEEEEECCceEecCC-CceeecCCeEEEEEECCCCCCCceEEEEECCeEccccC--------CCCeEEEEec
Confidence 543 446778888887665554 4678899999999999 556779999999999875322 2347999999
Q ss_pred CccCceeEEEEEEcCCcc-eEEEEEEEE
Q psy7042 247 RKEDAGDYTVNLSNSSGS-VSGTFTINI 273 (2245)
Q Consensus 247 ~~~d~G~Y~C~a~n~~g~-~~~~~~l~V 273 (2245)
..+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 142 ~~~d~G~Y~C~a~n~~g~~~s~~~~l~V 169 (170)
T 3ry4_A 142 NHSHSGDYHCTGNIGYTLFSSKPVTITV 169 (170)
T ss_dssp CGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred cccCCEEEEEEEEeCcCccccccEEEEE
Confidence 999999999999999987 455666766
No 179
>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus}
Probab=99.79 E-value=3.3e-18 Score=212.50 Aligned_cols=266 Identities=15% Similarity=0.098 Sum_probs=196.8
Q ss_pred eEeeCCCeEEEEEeeeecCCCeEEEEeCCeEeeccCeEEEEecCCeEEEEEcCCCCCcCEEEEEEEEeCCCCceeEEEEE
Q psy7042 586 AYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQ 665 (2245)
Q Consensus 586 ~~~~~g~~~~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~ 665 (2245)
..+..|++++|.|.+. .+.|.|+++|..+... + ..+....|+|.++...|.|.|.|.+.+ +.....+.+.
T Consensus 213 ~~v~~Gs~vtl~C~a~---~~~I~W~~ng~~i~~~-r----i~~~~~~L~I~nl~~sd~g~y~~~C~~--~~~i~~~~l~ 282 (488)
T 2q7n_A 213 KVVLAGSNMTICCMSP---TKVLSGQIGNTLRPLI-H----LYGQTVAIHILNIPVSENSGTNIIFIT--DDDVYGTVVF 282 (488)
T ss_dssp CEEESSCCCEEEECCS---SCEEEEEETTEECCCE-E----CSSSCEEEECCSCCCCCSSCEEEEEEE--SSCEEEEEEE
T ss_pred CEEcCCCCEEEEEECC---CCEEEEEECCEECchh-h----ccceEEEEEEeCCCcccCCcEEEEEEc--CCeEEEEEEE
Confidence 4578899999999997 4599999999877543 1 345678999999999999888887763 3335578888
Q ss_pred eeCCCCCCCCCeeeeecCCcEEEEeeCCCCC--CCcccccEEEEeeeCCCC-CeEEEce--eeeeeEEEecCCCCCEEEE
Q psy7042 666 ISDRPDPPQFPTVEDIGHDSLALVWRAPIWD--GGSNITNYIVEKREHPMS-SWIRVGN--TRFTTMAITGLSPGHQYEF 740 (2245)
Q Consensus 666 v~~~P~~p~~~~~~~~~~~si~lsW~~p~~~--~~~~~~~y~v~~~~~~~~-~w~~~~~--~~~~~~~i~~L~p~t~y~~ 740 (2245)
+..+|.+|.++.+......+++++|.++... +|..+..|.|.|+..+.. .|..... .....+.+..+...+.|.|
T Consensus 283 v~~pP~~P~nl~C~~~~~~svtcsW~pg~~~~l~G~~~t~Y~L~y~~~g~~~~c~~~~~~~~~~~~ct~~l~~~~t~Y~f 362 (488)
T 2q7n_A 283 AGYPPDVPQKLSCETHDLKEIICSWNPGRITGLVGPRNTEYTLFESISGKSAVFHRIEGLTNETYRLGVQMHPGQEIHNF 362 (488)
T ss_dssp EECCCCCCCSCEEEBSSSSEEEEEECCCSCCCCCTTSSCEEEEEETTTCCEEEEECSSCCCSSCEEEEEECCSSCCCCEE
T ss_pred eeCCCCCCcccEEEEcCCCEEEEEEeCCCcCCCCCCCceeEEEEEEECCCCCCCccccccCCceEEEEEcCCCCccEEEE
Confidence 8999999999999888999999999976544 245788999999754321 2322221 2234566655444699999
Q ss_pred EEEEEecccCCCCCCCCccEEecCccccccccccccccCCCceeecccccccccCCceEEEEeeeccCccccccccceec
Q psy7042 741 RVYAENVYGRSDPSTTSDLITTKDTFKKQIKKRQYDFDETGKKIRGKADEKVSDYDQYVFDIYSKYVPQPVDIKTSSVYD 820 (2245)
Q Consensus 741 ~v~a~n~~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 820 (2245)
+|.|.|..|.+. +. .. +.+.
T Consensus 363 ~V~A~N~~G~~~-S~-~~-~~~~--------------------------------------------------------- 382 (488)
T 2q7n_A 363 TLTGRNPLGQAQ-SA-VV-INVT--------------------------------------------------------- 382 (488)
T ss_dssp EEEEEETTEEEE-EE-EE-CCGG---------------------------------------------------------
T ss_pred EEEEEeCCCCcc-ce-EE-EEec---------------------------------------------------------
Confidence 999999999621 10 00 0000
Q ss_pred ccccccccccCceeEEEEeeecccCCeeEEEeeccCCchhhhhhheeeeeeeccCCCceEeecccccCCcceEEEEEEec
Q psy7042 821 HYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFEVLD 900 (2245)
Q Consensus 821 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 900 (2245)
...
T Consensus 383 -----------------------------------------------------------------------------~~v 385 (488)
T 2q7n_A 383 -----------------------------------------------------------------------------ERV 385 (488)
T ss_dssp -----------------------------------------------------------------------------GTB
T ss_pred -----------------------------------------------------------------------------CCC
Confidence 003
Q ss_pred CCCCCcccEEeeeeCceEEEEecCCCCCCCCccceEEEeeeecCCCceEE-eccee-eeceE--EEecCCCCceeeEEEE
Q psy7042 901 RPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTK-VSSYV-TTPFV--RVRNLAIGSTYEFRVM 976 (2245)
Q Consensus 901 ~P~~p~~l~~~~~~~~~~~l~W~~p~~~~g~~i~~y~i~~~~~~~~~~~~-~~~~~-~~~~~--~i~~L~p~~~y~~~v~ 976 (2245)
+|.||.++.+...+.+++.|+|++|...++ .+..|+|+|+..+...|.. ..... ....+ .|.+|.|++.|.|+|+
T Consensus 386 ~P~PP~nl~v~~~s~~sl~LsW~pP~~~~g-~~l~YeV~Yr~~~~~~w~~~~~~~~~~~~~~~v~l~~L~P~T~Y~~rVR 464 (488)
T 2q7n_A 386 APHDPTSLKVKDINSTVVTFSWYLPGNFTK-INLLCQIEICKANSKKEVRNATIRGAEDSTYHVAVDKLNPYTAYTFRVR 464 (488)
T ss_dssp CCCCCEEEEEEECSTTCEEEEEEEEEECSS-SEEEEEEEEBCTTSCCEEEEEEEECCEEEEEEEEECSCCSSCCBBCCEE
T ss_pred CCCCCeEEEEEecCCCEEEEEEeCCCCCCC-cceEEEEEEEECCCCCceEEEEEecCCCcEEEEEeCCCCCCceEEEEEE
Confidence 789999999988889999999999865554 7899999999877666642 22211 23345 9999999999999999
Q ss_pred EEeccccCCCccccCcccccCCCC
Q psy7042 977 AENQYGLSKPALTIDPIKAKHPFD 1000 (2245)
Q Consensus 977 a~n~~g~~~~s~~~~~~~~~t~~~ 1000 (2245)
|.+ .|.|.++..|..+.++|++.
T Consensus 465 A~~-~g~G~WS~WS~~v~~~T~e~ 487 (488)
T 2q7n_A 465 CSS-KTFWKWSRWSDEKRHLTTEA 487 (488)
T ss_dssp EEE-SSCSSCCCCCCCCCBCCCCC
T ss_pred EEE-CCCCCCCCCcCCEeEECCCC
Confidence 999 99887777777777776543
No 180
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.79 E-value=3.1e-19 Score=196.93 Aligned_cols=163 Identities=12% Similarity=0.168 Sum_probs=130.9
Q ss_pred ceEEeCCCeEEEEEEEeeecCCceEEEECCeeccC--------------CCeEEEEE---cCcEEEEEEeeeccCCCeEE
Q psy7042 99 DLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISS--------------GARYRVET---AGGVFRLHFNEVTDVDNGDY 161 (2245)
Q Consensus 99 ~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~--------------~~~~~~~~---~~~~~~L~i~~~~~~d~G~Y 161 (2245)
.+.+.+|++++|.|.+.+.|.+.|.|+|++..+.. ..|+.+.. .++..+|.|.+++.+|+|.|
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y 83 (184)
T 2ny1_B 4 VVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTY 83 (184)
T ss_dssp EEEEETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEE
T ss_pred cEEEeCCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEEE
Confidence 46789999999999999999999999999863211 22444432 33445699999999999999
Q ss_pred EEEEEcCcccceeEEEEEecCCCeeecCCCceEEcCCCeEEEEEEEecCCCceEEEeeCceeeecCCceEEEEeCCeEEE
Q psy7042 162 TCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIII 241 (2245)
Q Consensus 162 ~C~a~n~~g~~~~~~~l~V~~~P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L 241 (2245)
+|.|.|..| .+.|.|.. +.. +....+.+|+.++|.|.+.+.|.+.++|+++|..+.. ....|
T Consensus 84 ~C~~~~~~~----~~~l~V~~---~~~-~~~~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~~~----------~~~~L 145 (184)
T 2ny1_B 84 ICEVEDQKE----EVQLLVFG---LTA-NSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQ----------GGKTL 145 (184)
T ss_dssp EEEETTEEE----EEEEEEEE---EEE-SSCSEEETTCCEEEEEECCTTCCCEEEEECTTSCEEE----------ESSEE
T ss_pred EEEEEcCCC----cEEEEEEE---ecC-CCCceeecCCCEEEEEEcCCCCCCEEEEEeCCCcccc----------CceEE
Confidence 999998754 55666663 222 4456789999999999999999999999999876522 12379
Q ss_pred EEcccCccCceeEEEEEEcCCcceEEEEEEEEecCCCC
Q psy7042 242 FIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGP 279 (2245)
Q Consensus 242 ~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~ 279 (2245)
.|.++..+|+|.|+|.|.|..+..+.++.|.|.+.|.+
T Consensus 146 ~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~p~~ 183 (184)
T 2ny1_B 146 SVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKA 183 (184)
T ss_dssp EESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCC-
T ss_pred EEecCCcCCCeEEEEEEEECCceEEEEEEEEEEecCCC
Confidence 99999999999999999999999999999999988754
No 181
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.78 E-value=6.1e-19 Score=194.65 Aligned_cols=177 Identities=13% Similarity=0.110 Sum_probs=132.9
Q ss_pred CCCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECCeeccCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEEcC
Q psy7042 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNS 168 (2245)
Q Consensus 89 ~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 168 (2245)
++|.|...|.. .+.+|++|+|.|.+.+. .+.+.|+|+|..+..... ..........|.|.+++.+|+|.|+|.|.|.
T Consensus 3 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~~~-~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 79 (188)
T 1oll_A 3 PKPFIWAEPHF-MVPKEKQVTICCQGNYG-AVEYQLHFEGSLFAVDRP-KPPERINKVKFYIPDMNSRMAGQYSCIYRVG 79 (188)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCTT-CCEEEEEETTEEEEEECC-SSCTTCCEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCEEEeecCC-cCCCCCCEEEEEecCCC-CCEEEEEECCCccccccc-ccCCCcceeEEEeCcCCcccCeEEEEEecCC
Confidence 57889888877 89999999999998753 468999999987652100 0011223447999999999999999999987
Q ss_pred cccc--eeEEEEEecC---CCeeecCCCceEEcCCCeEEEEEEEecCCCceEEEeeCceeeecCCceEEEEeCCeEEEEE
Q psy7042 169 VGFA--HTSSRVKIGT---PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFI 243 (2245)
Q Consensus 169 ~g~~--~~~~~l~V~~---~P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i 243 (2245)
.+.. +..+.|.|.. +|.+...| ...+.+|+.++|.|.+.+ +++.+.|+|+|..+.. ..........|.|
T Consensus 80 ~~~~~~s~~~~l~V~~~~~~p~i~~~p-~~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~----~~~~~~~~~~L~I 153 (188)
T 1oll_A 80 ELWSEPSNLLDLVVTEMYDTPTLSVHP-GPEVISGEKVTFYCRLDT-ATSMFLLLKEGRSSHV----QRGYGKVQAEFPL 153 (188)
T ss_dssp TEECCCCCCEEEEEESCSCCCEEEEES-CSEEETTCEEEEEEECSS-SCSEEEEEEESSSCEE----EEEECSSEEEEEE
T ss_pred CCCCCCCCceEEEecccCCCCeEEECC-CCccccCCEEEEEEEcCC-CCCEEEEEECCccccc----cccCCCceeEEEE
Confidence 5532 3456777764 67776656 456899999999999876 4569999999987754 1223345678999
Q ss_pred cccCccCceeEEEEEEcCC---cceEEEEEEEEe
Q psy7042 244 KEIRKEDAGDYTVNLSNSS---GSVSGTFTINIT 274 (2245)
Q Consensus 244 ~~~~~~d~G~Y~C~a~n~~---g~~~~~~~l~V~ 274 (2245)
.+++.+|+|.|+|.|.|.. ...+..+.|.|.
T Consensus 154 ~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~ 187 (188)
T 1oll_A 154 GPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVT 187 (188)
T ss_dssp EECCGGGCEEEEEECEEETTEECCCCCCEEEEEE
T ss_pred CCCCcCCCcEEEEEEEcCCCcCCCCCCcEEEEec
Confidence 9999999999999999864 234556666664
No 182
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.78 E-value=2.7e-18 Score=191.08 Aligned_cols=180 Identities=17% Similarity=0.340 Sum_probs=145.1
Q ss_pred CCceeccCCceEEcCCCeEEEEEEecCcCCCeEEEeeCCEeccC--CceEEEEecCcEEEEEEeeeccCCCeEEEEEEec
Q psy7042 1697 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISS--GARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYN 1774 (2245)
Q Consensus 1697 ~p~~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~~~~l~~--~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n 1774 (2245)
+|.|...+.+..+.+|++++|.|.+.+.|.+.+.|++++..+.. ..++.+..++ +|.|.+++.+|+|.|+|.+.+
T Consensus 2 ~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~~~~ 78 (189)
T 2v5t_A 2 MLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANN---NLQILNINKSDEGIYRCEGRV 78 (189)
T ss_dssp CCEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEC-----CBCCCTTEEECTTS---CEEETTCCGGGCEEEEEEEEE
T ss_pred CceeeccCCCEEEeCCCcEEEEEEEcCCCCCEEEEEECCccceeccCCeEEEecCC---CEEEeeCCHhHCcEEEEEEEE
Confidence 56777888889999999999999999999999999999988753 3455544333 399999999999999999998
Q ss_pred Cceee--EEEEEEEecCCCccccCCC--ceEEcCCCeEEEEEEEeccCCcEEEEEECCEEeecCCceEEEEcCCeEEEEE
Q psy7042 1775 SVGFA--HTSSRVKIGTPPRIDRMPN--ALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFI 1850 (2245)
Q Consensus 1775 ~~g~~--~~~~~l~V~~~p~~~~~~~--~~~~~~g~~~~l~C~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~l~i 1850 (2245)
..+.. .....+.|..+|.+...+. ...+.+|+.+.|.|.+.|.|.+.+.|+++|..+....++.+. .....|.|
T Consensus 79 ~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~--~~~~~L~i 156 (189)
T 2v5t_A 79 EARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILK--GSNTELTV 156 (189)
T ss_dssp TTTTEEEEEEEEEEEEEEEEEECSCCEEEEETTSCCCEEEECEEEEESCCEEEEEETTEECCCSSSEEEE--TTTTEEEE
T ss_pred cCCCceEEEEEEEEecCCCCcccccccccccccCCCcEEEEEEEccCCCCeEEEEECCEECcCCCcEEEe--cCCCEEEE
Confidence 76433 3456777888887765544 456778999999999999999999999999999877666543 33457999
Q ss_pred cccCcccceEEEEEEEcCCeeeEEEEEEEEe
Q psy7042 1851 KEIRKEDAGDYTVNLSNSSGSVSGTFTINIT 1881 (2245)
Q Consensus 1851 ~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 1881 (2245)
.++..+|+|.|+|.|.|..|.....+.|.|.
T Consensus 157 ~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 187 (189)
T 2v5t_A 157 RNIINSDGGPYVCRATNKAGEDEKQAFLQVF 187 (189)
T ss_dssp CSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred cCCChhhCeeEEEEEEeCCCceeEEEEEEEE
Confidence 9999999999999999999999988888875
No 183
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.78 E-value=1.3e-18 Score=197.06 Aligned_cols=177 Identities=19% Similarity=0.259 Sum_probs=137.0
Q ss_pred ecCCcceEEeCCCeEEEEEEEeeecCCceEEEECCeeccC-------------------CCeEEEEEcCcEEEEEEeeec
Q psy7042 94 IVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISS-------------------GARYRVETAGGVFRLHFNEVT 154 (2245)
Q Consensus 94 ~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~-------------------~~~~~~~~~~~~~~L~i~~~~ 154 (2245)
+..+....+.+|+.++|.|...+.|.+.|.|+|++..... ..|+.+..++ .|.|.+++
T Consensus 3 ~i~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~---~L~i~~v~ 79 (208)
T 3r4d_A 3 TIEAVPPQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNG---SLLFQMIT 79 (208)
T ss_dssp EEEEESSEEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTS---CEEECSCC
T ss_pred cccCccceeecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecCC---eEEEcccc
Confidence 3344457789999999999988888889999997643221 2244433222 49999999
Q ss_pred cCCCeEEEEEEEcCc-ccceeEEEEEecCC---CeeecCCCceEEcCCCeEEEEEEEecCCCceEEEeeCceeeecCCce
Q psy7042 155 DVDNGDYTCEAYNSV-GFAHTSSRVKIGTP---PRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRF 230 (2245)
Q Consensus 155 ~~d~G~Y~C~a~n~~-g~~~~~~~l~V~~~---P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~ 230 (2245)
.+|+|.|+|.|.|.. +.....+.|.|..+ |.+...+.. +.+|+.+.|.|.+.+.| +.|.|+++|..+....++
T Consensus 80 ~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~--~~~g~~v~l~C~~~~~p-p~i~W~~~g~~l~~~~~~ 156 (208)
T 3r4d_A 80 MKDMGVYTLDMTDENYRRTQATVRFHVHQPVTQPFLQVTNTT--VKELDSVTLTCLSNDIG-ANIQWLFNSQSLQLTERM 156 (208)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEEEEEECCCCCCEEEESCSS--CCTTCCEEEEEECSCTT-CEEEEEETTEECCCCSSE
T ss_pred ccCCeEEEEEEEcccCceeEEEEEEEeccCCCCCEEecCCce--EeeCCCEEEEEECCCCC-CceEEEECCEeCCCCCCe
Confidence 999999999999985 55666778888776 455554444 89999999999999876 799999999999877776
Q ss_pred EEEEeCCeEEEEEcccCccCceeEEEEEEcCCcce-EEEEEEEEecCCC
Q psy7042 231 KFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV-SGTFTINITGLPG 278 (2245)
Q Consensus 231 ~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~p~ 278 (2245)
.+...+ .+|.|.++..+|+|.|+|.|.|..|.. +..++|.|..+|.
T Consensus 157 ~~~~~~--~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v~~~~~ 203 (208)
T 3r4d_A 157 TLSQNN--SILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDIIFDPH 203 (208)
T ss_dssp EEETTT--TEEEESSCCGGGCEEEEEEEECTTCCEECCCEEECCC----
T ss_pred EEcCCC--CEEEEeccCHHhCeEEEEEEecCCCcccCCceeeeEEeCCc
Confidence 655433 479999999999999999999999875 5577888876654
No 184
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=99.78 E-value=3.8e-18 Score=206.25 Aligned_cols=276 Identities=14% Similarity=0.067 Sum_probs=197.7
Q ss_pred CCceEEcCCCeEEEEEEEecc-----CCcEEEEEECCEEeecCCceEEEEcCC-eEEEEEcccCcccceEEEEEEEcCCe
Q psy7042 1797 PNALYIPEGDNTKVKIFYAGD-----QPMEVSLTKNGRVVQSDDRFKFTVLDD-YIIIFIKEIRKEDAGDYTVNLSNSSG 1870 (2245)
Q Consensus 1797 ~~~~~~~~g~~~~l~C~~~~~-----p~~~v~W~~~g~~l~~~~~~~~~~~~~-~~~l~i~~~~~~d~G~Y~C~a~n~~g 1870 (2245)
|.+..+..|++++|.|.+.+. |.+.|.|.+||+.+... ++.....+. ...|.|.++...|+|.|.|.+.+..+
T Consensus 7 p~~~~v~~G~~v~l~C~~~~~~~~~~~~~~i~W~~~g~~l~~~-~~~~~~~~~~~~~L~i~~~~~~d~g~y~c~~~~~~~ 85 (313)
T 2d9q_B 7 VSAPIVHLGDPITASCIIKQNCSHLDPEPQILWRLGAELQPGG-RQQRLSDGTQESIITLPHLNHTQAFLSCSLNWGNSL 85 (313)
T ss_dssp ESCSEECTTCCEEEEECCCTTSCSSCSCSCCEEESSSCBCTTC-EECCCSSSCCCEEEEESCCCSSEEEEEEEEESSSSE
T ss_pred CCCcEEcCCCCEEEEEEECCCCCCCCcccceEEEeCCEECCcc-ceEEEecCeEEEEEEEeccCCCccceEEeeecCCCc
Confidence 345678899999999999997 57899999999977432 221111122 26899999999999999999877666
Q ss_pred eeEEEEEEEEeCCCCCCCCCceeccc-ccceEEEEecCCCCCCCeeeeEEEEEEEcCCC------CceEEEeeecCcceE
Q psy7042 1871 SVSGTFTINITGLPGPPIGPLDVSEI-TKHTCTLHWNPPKYDGGLKVTHYVVERRDISM------PHWICISTTCHDTTF 1943 (2245)
Q Consensus 1871 ~~~~~~~l~v~~~p~~~~~~~~~~~~-~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~------~~~~~~~~~~~~~~~ 1943 (2245)
.....+.|.+..+|.+|. .+.+... ...++.+.|.++.. ++.. ..|.+.+..... ..|...........+
T Consensus 86 ~~~~~~~l~v~~~P~~P~-~l~c~~~~~~~~~~~~W~~~~~-~~~~-~~Y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (313)
T 2d9q_B 86 QILDQVELRAGYPPAIPH-NLSCLMNLTTSSLICQWEPGPE-THLP-TSFTLKSFKSRGNCQTQGDSILDCVPKDGQSHC 162 (313)
T ss_dssp EEEEEEEEEECCCCCCCE-EEEEEEETTTTEEEEEEECCSC-CSSC-CEEEEEEEECCTTSCSCCCCEEEECCCTTCSEE
T ss_pred eeEEEEEEccCCCCCCCc-cceeeECCCCccEEEEecCCCC-CCCc-eeEEEEEEecCCCcccCCcccccCCCCCCCcEE
Confidence 666678888877777664 3444444 35789999998764 4433 469998876542 235544433344556
Q ss_pred Ee--cCCCCCCeEEEEEEEECCCCCCCCCCCcCceeccCCCCCCCCCCCcEEEEE------cCCeEEEEEeccCCCCCCc
Q psy7042 1944 IV--QGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQV------GGDFVNLSWDKPLDDGGSR 2015 (2245)
Q Consensus 1944 ~i--~~l~~~~~y~~~~~a~n~~g~~~~s~~~~~~~~~~~~~~p~~p~~~~~~~~------~~~~v~l~W~~p~~~~~~~ 2015 (2245)
.+ .+|.+++.|.|+|.|.|..|.+.+... ........+|.+|.++.+... ..+.+.|+|.+|.. .+..
T Consensus 163 ~~~~~~L~~~~~Y~f~V~A~N~~G~~~s~~~---~~~~~~~~~p~pP~~~~~~~~~~~~~~~~~~l~l~W~~p~~-~~~~ 238 (313)
T 2d9q_B 163 SIPRKHLLLYQNMGIWVQAENALGTSMSPQL---CLDPMDVVKLEPPMLRTMDPSPEAAPPQAGCLQLSWEPWQP-GLHI 238 (313)
T ss_dssp EEEGGGCCSSSCEEEEEEEEETTEEEECCCE---EECGGGGEECCCCEEEECCC-------CCSCEEEEEECCGG-GTTS
T ss_pred EECccccccceeEEEEEEEECCCCCccCccE---EEehhheeccCcCceeEEEEecccccCCCCeEEEEECCCCC-CCce
Confidence 66 459999999999999999998643221 111111235777776665544 45789999998754 3445
Q ss_pred eeEEEEEEe-eecCccceEEEEEEeccceEEeCCCcCCceEEEEEEEEeccccCCCcCCCCccccc
Q psy7042 2016 IQGYWIDKH-EVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIK 2080 (2245)
Q Consensus 2016 i~~y~i~~~-~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~s~~v~~~ 2080 (2245)
+.+|.|+|+ ..++..|..+.........+.|.+|.++..|.++++|.|..|.+..+.-+..+.+.
T Consensus 239 ~l~Y~v~y~~~~~~~~w~~~~~~~~~~~~~~l~~L~p~t~Y~~rVra~~~~g~G~wS~wS~~~~~~ 304 (313)
T 2d9q_B 239 NQKCELRHKPQRGEASWALVGPLPLEALQYELCGLLPATAYTLQIRCIRWPLPGHWSDWSPSLELR 304 (313)
T ss_dssp CEEEEEEEEESSSCCCCEEEEEECSCEEEEEECSCCSCCCEEEEEEEEECSSCCCCCCCCCCEEEC
T ss_pred eEEEEEEEccCCCCCCcEEcccccCcceEEEEeCCCCCCeEEEEEEeeECCCCCccCCCCCcccee
Confidence 689999999 67778898765554455779999999999999999999998888766666555544
No 185
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=99.78 E-value=6.3e-18 Score=189.37 Aligned_cols=192 Identities=38% Similarity=0.640 Sum_probs=161.3
Q ss_pred ecCCCCCcccEEeeeeCceEEEEecCCCCCCCCccceEEEeeeecCCCceEEecceeeeceEEEecCCCCceeeEEEEEE
Q psy7042 899 LDRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFVRVRNLAIGSTYEFRVMAE 978 (2245)
Q Consensus 899 ~~~P~~p~~l~~~~~~~~~~~l~W~~p~~~~g~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~ 978 (2245)
.++|.+|.++.+...+.+++.|+|++|...+|..+.+|.|+++......|..+........+.+.+|.|++.|.|+|+|.
T Consensus 3 ~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~ 82 (197)
T 3lpw_A 3 MDTPGPPQDLKVKEVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVATNCHKTSWKVDQLQEGCSYYFRVLAE 82 (197)
T ss_dssp CCSCCCCEEEEEEEECSSCEEEEEECCSCCTTSCCCEEEEEEEETTCSSCEEEEEEECSSEEEECCCCTTCEEEEEEEEE
T ss_pred CCCCCCCCCcEEEEecCCEEEEEEcCCccCCCCcccEEEEEEEECCCCccEEeecCCCccEEEEcCCCCCCEEEEEEEEE
Confidence 36899999999999999999999999977777679999999999888888888777788899999999999999999999
Q ss_pred eccccCCCccccCcccccCCCCCCCCCCCCeeEeecCCeEEEEecCCCCCCCCccceEEEEEEecCCccceeccccccCC
Q psy7042 979 NQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPD 1058 (2245)
Q Consensus 979 n~~g~~~~s~~~~~~~~~t~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~ 1058 (2245)
|..|.+.++. .....+....|.+|.++++...+.+++.|+|.+|...+++++.+|.|+|+..+...|..+....
T Consensus 83 ~~~g~~~~s~---~~~~~t~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~--- 156 (197)
T 3lpw_A 83 NEYGIGLPAE---TAESVKASERPLPPGKITLMDVTRNSVSLSWEKPEHDGGSRILGYIVEMQTKGSDKWATCATVK--- 156 (197)
T ss_dssp ETTEECCCEE---CSSCEESCCCCCCCSCEEEEEECSSCEEEEECCCSCCTTSCCCEEEEEEEETTCSCCEEEEEES---
T ss_pred cCccccCCCC---CccceecCCCCCCCcccEEEeccCCeEEEEecCCCcCCCCcccEEEEEEEeCCCCceEEeeccc---
Confidence 9999987763 3344455677889999999999999999999999888776899999999987766665432110
Q ss_pred cceeEEEEeecccccCCccCchhhhhhhhhcccccccccccCCcEEEEEEEEEecCCCCCCCCCCccee
Q psy7042 1059 TSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSDIIM 1127 (2245)
Q Consensus 1059 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~v~A~n~~G~~~~s~~~~~~~ 1127 (2245)
. +.+++.+|.+++.|.|+|+|.|..|.|+++..+...+
T Consensus 157 -~------------------------------~~~~~~~L~p~t~Y~~~V~A~n~~G~s~~S~~s~~v~ 194 (197)
T 3lpw_A 157 -V------------------------------TEATITGLIQGEEYSFRVSAQNEKGISDPRQLSVPVI 194 (197)
T ss_dssp -S------------------------------SEEEECCCCTTCEEEEEEEEEETTEECCCEECSSCEE
T ss_pred -c------------------------------cEEEeCCcCCCCEEEEEEEEEeCCccCCCccCcccEe
Confidence 1 1126999999999999999999999998876665544
No 186
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.78 E-value=4.1e-19 Score=192.55 Aligned_cols=156 Identities=15% Similarity=0.193 Sum_probs=122.3
Q ss_pred ceEEeCCCeEEEEEEEee--ecCCceEEEECCeecc----------CCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEE
Q psy7042 99 DLVVPLGKLLTLQCEATG--TPVPKCRWLRNGREIS----------SGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAY 166 (2245)
Q Consensus 99 ~~~v~~G~~v~L~C~~~g--~p~~~i~W~~~g~~l~----------~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 166 (2245)
.+.+.+|++++|.|...+ .|.+.|.|+|++..+. ...|+.+..++ +|.|.+++.+|+|.|+|.|.
T Consensus 5 ~v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~g---sL~I~~v~~~D~G~Y~C~~~ 81 (176)
T 1hng_A 5 TVWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANG---DLKIKNLTRDDSGTYNVTVY 81 (176)
T ss_dssp EEEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTTS---CEEESSCCGGGCEEEEEEEE
T ss_pred EEEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECCCC---cEEEcccccccCEEEEEEEE
Confidence 357889999999995433 5567899999996542 35577774433 39999999999999999999
Q ss_pred cCcccc--eeEEEEEecCCCeeecCCCceEEcCCCeEEEEEEEecCCCceEEEeeCceeeecCCceEEEEeCCeEEEEEc
Q psy7042 167 NSVGFA--HTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIK 244 (2245)
Q Consensus 167 n~~g~~--~~~~~l~V~~~P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~ 244 (2245)
|..|.. +..+.|.|..++. .+.....+..++|.|.+.|.|+|.|+|+|+|..+..+.+ +.|.
T Consensus 82 n~~g~~~~~~~~~l~V~~~~~-----~p~i~~~~~~v~L~C~~~g~p~p~i~W~~~g~~l~~~~~-----------~~i~ 145 (176)
T 1hng_A 82 STNGTRILNKALDLRILEMVS-----KPMIYWECSNATLTCEVLEGTDVELKLYQGKEHLRSLRQ-----------KTMS 145 (176)
T ss_dssp ETTCCEEEEEEEEEEEECCCC-----CCEEEEETTTTEEEEECSSCSSCEEEEEETTEEEEEESS-----------SEEE
T ss_pred eCCCCEEEEEEEEEEEeCCCC-----CCEEEecCCcEEEEEEecCCCCcEEEEEECCEECCCCCc-----------EEEE
Confidence 999986 5677888877532 111223355699999999999999999999999875544 3344
Q ss_pred ccCccCceeEEEEEEcCCcceEEEEEEEE
Q psy7042 245 EIRKEDAGDYTVNLSNSSGSVSGTFTINI 273 (2245)
Q Consensus 245 ~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 273 (2245)
++..+|+|.|+|.|.|..|..++.+.|.+
T Consensus 146 ~~~~~d~G~Y~C~a~N~~g~~~~~~~l~~ 174 (176)
T 1hng_A 146 YQWTNLRAPFKCKAVNRVSQESEMEVVNC 174 (176)
T ss_dssp EECSCCSSCEEEEEEETTEEEEEEECCCC
T ss_pred EEEccCCeEEEEEEEecCCCceecccccC
Confidence 67799999999999999999888887765
No 187
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.77 E-value=9.9e-19 Score=192.14 Aligned_cols=157 Identities=17% Similarity=0.175 Sum_probs=124.7
Q ss_pred CCCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECCeeccCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEEcC
Q psy7042 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNS 168 (2245)
Q Consensus 89 ~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 168 (2245)
.+|.|...|.. .+.+|++++|.|.+.+ |.+.+.|+|+|... ...++ .|.|.+++.+|+|.|+|.|.|.
T Consensus 7 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~~--------~~~~~--~L~i~~v~~~D~G~Y~C~a~n~ 74 (184)
T 2gi7_A 7 PKPSLQALPSS-LVPLEKPVTLRCQGPP-GVDLYRLEKLSSSR--------YQDQA--VLFIPAMKRSLAGRYRCSYQNG 74 (184)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECST-TCSEEEEEETTTCC--------EESSS--EEEESSCCGGGCEEEEEEEEET
T ss_pred CCCeEEeCCCc-cccCCCcEEEEEeCCC-CCCEEEEEECCccc--------cCccc--EEEECcCChhhCceEEEEEEcC
Confidence 58888888775 8999999999999987 77899999998761 12233 5999999999999999999998
Q ss_pred cccc--eeEEEEEec---CCCeeecCCCceEEcCCCeEEEEEEEecCCCceEEEeeCceeeecCCceEEEEeCCeEEEEE
Q psy7042 169 VGFA--HTSSRVKIG---TPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFI 243 (2245)
Q Consensus 169 ~g~~--~~~~~l~V~---~~P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i 243 (2245)
.|.. +..+.|.|. .+|.+...| ...+.+|+.++|.|.+.+.| +.+.|+|+|..+...... ......|.|
T Consensus 75 ~g~~~~s~~~~l~V~~~~~~p~i~~~p-~~~v~~G~~v~l~C~~~~~~-~~~~w~k~g~~~~~~~~~----~~~~~~L~i 148 (184)
T 2gi7_A 75 SLWSLPSDQLELVATGVFAKPSLSAQP-GPAVSSGGDVTLQCQTRYGF-DQFALYKEGDPAPYKNPE----RWYRASFPI 148 (184)
T ss_dssp TEEBCCCCCEEEEEESSSCCCEEEEEC-CCSSCCTTCEEEEEECSSCC-CEEEEEECCCCTTSCCCC----EEEEESSSE
T ss_pred CCccCCCCCEEEEecCcCCCCEEEeCC-CceecCCCcEEEEEEcCCCC-cEEEEEECCCcCcceecC----CCceEEEEE
Confidence 7642 345677774 356776666 45678999999999987655 699999999887653221 123346899
Q ss_pred cccCccCceeEEEEEEcCCc
Q psy7042 244 KEIRKEDAGDYTVNLSNSSG 263 (2245)
Q Consensus 244 ~~~~~~d~G~Y~C~a~n~~g 263 (2245)
.++..+|+|.|+|.|.|..+
T Consensus 149 ~~v~~~D~G~Y~C~a~n~~~ 168 (184)
T 2gi7_A 149 ITVTAAHSGTYRCYSFSSRD 168 (184)
T ss_dssp EEETTCCSEEEEEEEECTTS
T ss_pred ccCCccCCeEEEEEEEeCCC
Confidence 99999999999999999864
No 188
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.77 E-value=1e-18 Score=198.60 Aligned_cols=173 Identities=17% Similarity=0.240 Sum_probs=133.2
Q ss_pred eecCCcceEEeCCCeEEEEEEEeeecCCceEEEECC--eec------------cCCCeEEEEEcCcEEEEEEeeeccCCC
Q psy7042 93 FIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNG--REI------------SSGARYRVETAGGVFRLHFNEVTDVDN 158 (2245)
Q Consensus 93 ~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g--~~l------------~~~~~~~~~~~~~~~~L~i~~~~~~d~ 158 (2245)
++..|..+.+.+|++++|.|.+.+.|.+.|.|+|++ ..+ ....|+.+...++..+|.|.+++.+|+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 83 (213)
T 3d9a_L 4 LTQSPATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDF 83 (213)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EEeCCccEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhhC
Confidence 455678889999999999999999998999999853 221 113578887777778899999999999
Q ss_pred eEEEEEEEcCccccee-EEEEEecC---CCeeecCCCceEEcCCCeEEEEEEEec-CCCc-eEEEeeCceeeecCCceEE
Q psy7042 159 GDYTCEAYNSVGFAHT-SSRVKIGT---PPRIDRMPNALYIPEGDNTKVKIFYAG-DQPM-EVSLTKNGRVVQSDDRFKF 232 (2245)
Q Consensus 159 G~Y~C~a~n~~g~~~~-~~~l~V~~---~P~~~~~~~~~~v~~G~~~~l~C~~~g-~p~~-~i~W~~~g~~l~~~~~~~~ 232 (2245)
|.|+|.|.|..+.... .+.|.|.. +|.+...+....+.+|+.++|.|.+.| .|++ .|+|+|+|..+........
T Consensus 84 G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~ 163 (213)
T 3d9a_L 84 GMYFCQQSNSWPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSW 163 (213)
T ss_dssp EEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEEEE
T ss_pred EEEEEeeecCCcceeCCCEEEEEecCCCCceeEeECCChhhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCcceeeecC
Confidence 9999999998876443 44788876 677766554444557999999999987 6665 8999999999865511110
Q ss_pred --EEeC-----CeEEEEEcccCccCceeEEEEEEcCCcce
Q psy7042 233 --TVLD-----DYIIIFIKEIRKEDAGDYTVNLSNSSGSV 265 (2245)
Q Consensus 233 --~~~~-----~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 265 (2245)
.... ..+.|.|.++..+|+|.|+|.|.|.....
T Consensus 164 ~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 203 (213)
T 3d9a_L 164 TDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 203 (213)
T ss_dssp CCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSS
T ss_pred CCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCCC
Confidence 0011 12489999999999999999999987654
No 189
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.77 E-value=2.7e-18 Score=199.81 Aligned_cols=195 Identities=23% Similarity=0.386 Sum_probs=146.3
Q ss_pred CCCceecc----CCceEEcCCCeEEEEEEecCcCCCeEEEeeCCEeccCCceE-EEEecCcEEEEEEeeeccCCCeEEEE
Q psy7042 1696 EKPDFIVP----LKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARY-RVETAGGVFRLHFNEVTDVDNGDYTC 1770 (2245)
Q Consensus 1696 ~~p~~~~~----~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~~~~l~~~~~~-~~~~~~~~~~L~i~~v~~~d~G~Y~C 1770 (2245)
.+|.|..+ +..+.+.+|+++.|.|.+.+.|.+.+.|++++..+....+. .........+|.|.+++.+|+|.|+|
T Consensus 10 ~~P~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 89 (241)
T 3grw_A 10 GAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTC 89 (241)
T ss_dssp -CCEESSGGGGSCCEEEEETTSEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEE
T ss_pred CCceeEcCCCCCCcceEEcCCCeEEEEEEecCCCCceeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEEE
Confidence 46666654 34588999999999999999999999999999998654332 11112233359999999999999999
Q ss_pred EEecCceeeEEEEEEEecCC----Cc-cccCCCceEEcCCCeEEEEEEEeccCCcEEEEEE----CCEEeecCCceEEEE
Q psy7042 1771 EAYNSVGFAHTSSRVKIGTP----PR-IDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTK----NGRVVQSDDRFKFTV 1841 (2245)
Q Consensus 1771 ~~~n~~g~~~~~~~l~V~~~----p~-~~~~~~~~~~~~g~~~~l~C~~~~~p~~~v~W~~----~g~~l~~~~~~~~~~ 1841 (2245)
.+.|..|.......|.|... |. +...+....+.+|+.+.|.|.+.|.|.+.+.|++ +|..+..........
T Consensus 90 ~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~ 169 (241)
T 3grw_A 90 VVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTV 169 (241)
T ss_dssp EEEETTEEEEEEEEEEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCTTTCCCEEE
T ss_pred EEeecCCceEEEEEEEEeccCCCCceeecCCCccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccCCCCceeeee
Confidence 99999998888888888652 22 3335667788899999999999999999999999 887775543322211
Q ss_pred --------cCCeEEEEEcccCcccceEEEEEEEcCCeeeEEEEEEEEeCCCCCCCCC
Q psy7042 1842 --------LDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGP 1890 (2245)
Q Consensus 1842 --------~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~~~~ 1890 (2245)
......|.|.++..+|+|.|+|.|.|..|..+..+.|.|..+|.++...
T Consensus 170 ~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~~~ 226 (241)
T 3grw_A 170 LKSWISESVEADVRLRLANVSERDGGEYLCRATNFIGVAEKAFWLSVHGPRAAEEEL 226 (241)
T ss_dssp EEEEECSBSEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEC----------
T ss_pred eeEeeeeecCCceEEEECcCCcccCcEEEEEEecCcceEEEEEEEEecCCCCCCccc
Confidence 1134679999999999999999999999999999999999888776543
No 190
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.77 E-value=2.4e-18 Score=191.80 Aligned_cols=172 Identities=20% Similarity=0.206 Sum_probs=136.3
Q ss_pred CCCceeccCCceEEcCCCeEEEEEEecCcCCCe-EEEeeCCEeccCCceEEEEecCcEEEEEEeeeccCCCeEEEEEEec
Q psy7042 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPK-CRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYN 1774 (2245)
Q Consensus 1696 ~~p~~~~~~~~~~~~~G~~v~L~C~~~~~p~~~-v~W~~~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n 1774 (2245)
.+|.+...+....+.+|++++|.|.+.+.|.+. +.|+|+|..+.... ..|.|.+++.+|+|.|+|.+.|
T Consensus 6 p~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~~~----------~~L~i~~v~~~D~G~Y~C~a~n 75 (204)
T 3sgj_C 6 PKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQA----------SSYFIDAATVDDSGEYRCQTQL 75 (204)
T ss_dssp CBCEEEEESCCSEEETTCCEEEEEECCSSSSCCCEEEEETTEEESCCS----------SEEEESSCCGGGCEEEEEEETT
T ss_pred CCCeEEEcCCCeEEECCCCEEEEEcCCCCCCCcEEEEEECCEEcccCc----------cEEEEecccccCCEEEEEEeCC
Confidence 466777777778899999999999999988775 99999999876443 3499999999999999999988
Q ss_pred CceeeEEEEEEEecCCCccccCCCceEEcCCCeEEEEEEEecc-CCcEEEEEECCEEeecCCceEEEEcCCeEEEEEccc
Q psy7042 1775 SVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGD-QPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEI 1853 (2245)
Q Consensus 1775 ~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~l~i~~~ 1853 (2245)
. .....+.|.|..+|.+...+. ..+.+|+++.|.|.+.+. |.+.+.|+|+|..+... .....|.|.++
T Consensus 76 ~--~~s~~~~l~V~~~p~~~~~~~-~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~--------~~~~~L~i~~v 144 (204)
T 3sgj_C 76 S--TLSDPVQLEVHIGWLLLQAPR-WVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKYF--------HHNSDFYIPKA 144 (204)
T ss_dssp S--BCCCCEEEEEECSSEEEECSC-SEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEEEE--------EECCCEEESSC
T ss_pred C--cccccEEEEEecCceEecCCc-eeEeCCCcEEEEEEecCCCCCceEEEEECCcEeecc--------cCCceEEECcC
Confidence 4 344567888888887665554 678899999999999776 56899999999986432 12346999999
Q ss_pred CcccceEEEEEEEc-CCeeeEEEEEEEEeCCCCCCC
Q psy7042 1854 RKEDAGDYTVNLSN-SSGSVSGTFTINITGLPGPPI 1888 (2245)
Q Consensus 1854 ~~~d~G~Y~C~a~n-~~g~~~~~~~l~v~~~p~~~~ 1888 (2245)
..+|+|.|+|.|.| ..+..+..+.|.|.++|.+|.
T Consensus 145 ~~~D~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~P~ 180 (204)
T 3sgj_C 145 TLKDSGSYFCRGLVGSKNVSSETVQITITQGLAVST 180 (204)
T ss_dssp CGGGCEEEEEEEEETTEEEECCCEEEEEEC------
T ss_pred CcccCEEEEEEEEeCCCceecCcEEEEEeCcCCCCc
Confidence 99999999999999 455667788999988776654
No 191
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.76 E-value=1.9e-17 Score=187.96 Aligned_cols=176 Identities=24% Similarity=0.370 Sum_probs=154.8
Q ss_pred eEeeCCCeEEEEEeeeecCCCeEEEEeCCeEeecc--CeEEEEecCCeEEEEEcCCCCCcCEEEEEEEEeCCCCceeEEE
Q psy7042 586 AYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESG--GHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVK 663 (2245)
Q Consensus 586 ~~~~~g~~~~l~C~~~g~p~~~i~W~~~~~~~~~~--~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~ 663 (2245)
..+..|+.+.|.|.+.|.|.+.|.|+|+|..+... .++.+........|.|.++...|.|.|+|.|.|..|..+..+.
T Consensus 28 ~~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 107 (215)
T 3mtr_A 28 VYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQESLEFI 107 (215)
T ss_dssp EEECTTCCEEEEEEEEEESCCEEEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEEEECSSCEEEEEEE
T ss_pred EEEECCCCEEEEEEEeecCCCEEEEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEEEEECCCceEEEEE
Confidence 56888999999999999999999999999988765 5667766667889999999999999999999999999999999
Q ss_pred EEeeCCCCCCCCCeeeeecCCcEEEEeeCCCCCCCcccccEEEEeeeCCCCCeEEEcee-----eeeeEEEecCCCCCEE
Q psy7042 664 IQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGNT-----RFTTMAITGLSPGHQY 738 (2245)
Q Consensus 664 l~v~~~P~~p~~~~~~~~~~~si~lsW~~p~~~~~~~~~~y~v~~~~~~~~~w~~~~~~-----~~~~~~i~~L~p~t~y 738 (2245)
|.+..+|.+|..+.+ .....++.|+|.+|..+++.++..|.++++......|...... ....+.|.+|.+++.|
T Consensus 108 l~v~~~P~~p~~~~~-~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~l~i~~L~~~~~y 186 (215)
T 3mtr_A 108 LVQADTPSSPSIDQV-EPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTY 186 (215)
T ss_dssp EEECCCCCCCEEEEE-EEETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEEEEEHHHHHHHTEEEEECCCTTCEE
T ss_pred EEECCCCCCCcceEE-EEecceEEEEEecCCccCCCceEEEEEEEEECCCCcccccccccccccccccEEECCCCCCCEE
Confidence 999999999987776 4667889999998888889999999999999888889765421 1268999999999999
Q ss_pred EEEEEEEecccCCCCCCCCccEEe
Q psy7042 739 EFRVYAENVYGRSDPSTTSDLITT 762 (2245)
Q Consensus 739 ~~~v~a~n~~G~~~~s~~~~~~~~ 762 (2245)
.|+|.|.|..|.+.+|..+.+.+.
T Consensus 187 ~~~~~A~N~~G~s~~S~~~~v~T~ 210 (215)
T 3mtr_A 187 AVRLAALNGKGLGEISAASEFKTQ 210 (215)
T ss_dssp EEEEEEEESSCBCCCCCCEEEECC
T ss_pred EEEEEEEeCCcccCcccceeeEec
Confidence 999999999999999987775543
No 192
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.76 E-value=3.7e-18 Score=193.90 Aligned_cols=169 Identities=12% Similarity=0.180 Sum_probs=131.8
Q ss_pred CceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECC--eecc------------CCCeEEEEEcCcEEEEEEeeeccC
Q psy7042 91 PDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNG--REIS------------SGARYRVETAGGVFRLHFNEVTDV 156 (2245)
Q Consensus 91 P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g--~~l~------------~~~~~~~~~~~~~~~L~i~~~~~~ 156 (2245)
|.++.+|..+.+.+|++++|.|.+.+.|.+.|.|+|++ ..+. ..+|+.+...++..+|.|.+++.+
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 81 (213)
T 3nl4_L 2 VVMTQTPASVSEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLECA 81 (213)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGG
T ss_pred ccEEeCCCeEEEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCChH
Confidence 56777788899999999999999999999999999942 2111 145888887778889999999999
Q ss_pred CCeEEEEEEEcCccc---ceeEEEEEe---cCCCeeecCCCceEEcCCCeEEEEEEEec-CCCceEEEeeCceeeecCCc
Q psy7042 157 DNGDYTCEAYNSVGF---AHTSSRVKI---GTPPRIDRMPNALYIPEGDNTKVKIFYAG-DQPMEVSLTKNGRVVQSDDR 229 (2245)
Q Consensus 157 d~G~Y~C~a~n~~g~---~~~~~~l~V---~~~P~~~~~~~~~~v~~G~~~~l~C~~~g-~p~~~i~W~~~g~~l~~~~~ 229 (2245)
|+|.|+|.|.|..+. ....+.|.| ..+|.+...+....+.+|+.++|.|.+.| .|.+.|+|+|+|..+..+..
T Consensus 82 D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~g~~P~~~v~W~k~g~~~~~~~~ 161 (213)
T 3nl4_L 82 DAATYYCQSTYENPTYVSFGGGTEVGVKGDPVAPTVLIFPPSADLVATGTVTIVCVANKYFPDVTVTWEVDGTTQTTGIE 161 (213)
T ss_dssp GCEEEEEEECCSSTTTCEECCCEEEEEECCCBCCEEEEECCCHHHHTTSEEEEEEEEEEEBSCCEEEEEETTEECCSSEE
T ss_pred HCEEEEEecCCCCceeEEeCCCeEEEEeCCCcCCeEEEeCCchhhccCCcEeEEEEEecccCCcEEEEEeCCccCCCCee
Confidence 999999999998773 333556777 45677766666666778999999999988 89999999999998864320
Q ss_pred eEEE--E-e-C---CeEEEEEcccCccCceeEEEEEE
Q psy7042 230 FKFT--V-L-D---DYIIIFIKEIRKEDAGDYTVNLS 259 (2245)
Q Consensus 230 ~~~~--~-~-~---~~~~L~i~~~~~~d~G~Y~C~a~ 259 (2245)
.... . . + ..+.|.|.++..+|+|.|+|.|.
T Consensus 162 ~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 162 NSKTPQNSADCTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp EEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred cccCcccCCCCeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 0000 0 0 0 12469999999999999999999
No 193
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.76 E-value=5.3e-18 Score=198.31 Aligned_cols=184 Identities=16% Similarity=0.219 Sum_probs=137.6
Q ss_pred CcceEEeCCCeEEEEEEEeeec--CCceEEEEC--Ceecc----------------CCCeEEEEEc--CcEEEEEEeeec
Q psy7042 97 LKDLVVPLGKLLTLQCEATGTP--VPKCRWLRN--GREIS----------------SGARYRVETA--GGVFRLHFNEVT 154 (2245)
Q Consensus 97 ~~~~~v~~G~~v~L~C~~~g~p--~~~i~W~~~--g~~l~----------------~~~~~~~~~~--~~~~~L~i~~~~ 154 (2245)
|..+.+.+|++|+|.|.+.|.| .+.|.|+|+ +..+. ...|+.+..+ ++..+|.|.+++
T Consensus 7 p~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 86 (257)
T 1f3r_B 7 SGPGLVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSLQ 86 (257)
T ss_dssp ECCSEECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESCC
T ss_pred CCCccccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCC
Confidence 3446789999999999999875 688999995 22110 1357777653 566789999999
Q ss_pred cCCCeEEEEEEEcCcc-------c--ceeEEEEEecCCC---------------eeecCCCceEEcCCCeEEEEEEEecC
Q psy7042 155 DVDNGDYTCEAYNSVG-------F--AHTSSRVKIGTPP---------------RIDRMPNALYIPEGDNTKVKIFYAGD 210 (2245)
Q Consensus 155 ~~d~G~Y~C~a~n~~g-------~--~~~~~~l~V~~~P---------------~~~~~~~~~~v~~G~~~~l~C~~~g~ 210 (2245)
.+|+|.|.|.|.|..| . ....+.|.|..+| .+...|..+.+.+|++++|.|.+.+.
T Consensus 87 ~~DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~ 166 (257)
T 1f3r_B 87 TDDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRVTLSCKGSQN 166 (257)
T ss_dssp TTCCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCTTCCEEEEEECSSC
T ss_pred cccCEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcCCCCEEEEEEECCc
Confidence 9999999999999854 1 1134578887654 24445667789999999999999999
Q ss_pred CCceEEEee--Cceeee------------cCCceEEEEeCCeEEEEEcccCccCceeEEEEEEcCCcceEEEEEEEEecC
Q psy7042 211 QPMEVSLTK--NGRVVQ------------SDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGL 276 (2245)
Q Consensus 211 p~~~i~W~~--~g~~l~------------~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 276 (2245)
|.+.+.||| +|..+. ...++.+...+....|.|.++..+|+|.|+|.|.|........+.|.|...
T Consensus 167 ~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~g~gt~l~V~~~ 246 (257)
T 1f3r_B 167 INNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATYFCYQYNNGYTFGAGTKLELKAA 246 (257)
T ss_dssp CBTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSEEEEEEESSSEEECCCCEECCSSS
T ss_pred CCCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCEEEEEEEeCCCCeECCCEEEEEeCC
Confidence 988999999 665431 134565555566678999999999999999999997522334567777665
Q ss_pred CCCC
Q psy7042 277 PGPP 280 (2245)
Q Consensus 277 p~~~ 280 (2245)
+..+
T Consensus 247 ~~~~ 250 (257)
T 1f3r_B 247 EQKL 250 (257)
T ss_dssp CCCC
T ss_pred CcCC
Confidence 5433
No 194
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.76 E-value=2.5e-18 Score=201.54 Aligned_cols=178 Identities=15% Similarity=0.181 Sum_probs=132.7
Q ss_pred eecCCcceEEeCCCeEEEEEEEee---ecCCceEEEECCeecc------------------------------CCCeEEE
Q psy7042 93 FIVPLKDLVVPLGKLLTLQCEATG---TPVPKCRWLRNGREIS------------------------------SGARYRV 139 (2245)
Q Consensus 93 ~~~~~~~~~v~~G~~v~L~C~~~g---~p~~~i~W~~~g~~l~------------------------------~~~~~~~ 139 (2245)
+..++..+.+.+|+.++|.|.+.+ .|.+.|.|+|++.... ...|+.+
T Consensus 5 v~~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 84 (250)
T 2fbo_J 5 VRTTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASV 84 (250)
T ss_dssp EECSCSEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEEC
T ss_pred EEcCCCceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEe
Confidence 345666789999999999999998 7888999999875431 1123333
Q ss_pred EEcCcEEEEEEeeeccCCCeEEEEEEEcCcccc-----eeEEEEEecCC---Ceee-cCCCceEEcCCCeEEEEEEEecC
Q psy7042 140 ETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFA-----HTSSRVKIGTP---PRID-RMPNALYIPEGDNTKVKIFYAGD 210 (2245)
Q Consensus 140 ~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~-----~~~~~l~V~~~---P~~~-~~~~~~~v~~G~~~~l~C~~~g~ 210 (2245)
... +...|.|.+++.+|+|.|+|.|.|..+.. ..++.|.|..+ |.+. ..+....+.+|+.+.|.|.+.|.
T Consensus 85 ~~~-~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~~g~ 163 (250)
T 2fbo_J 85 ANL-AAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCTDC 163 (250)
T ss_dssp SCT-TSCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCEESC
T ss_pred ccC-CcceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEecCC
Confidence 221 22369999999999999999999987753 45788999875 3443 34556788899999999999999
Q ss_pred CCceEEEeeCceeeecCCceE----------------------EEEeCCeEEEEEcccCccCceeEEEEEEcCCc---ce
Q psy7042 211 QPMEVSLTKNGRVVQSDDRFK----------------------FTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSG---SV 265 (2245)
Q Consensus 211 p~~~i~W~~~g~~l~~~~~~~----------------------~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g---~~ 265 (2245)
|.|.|+|||++..+....... ... .....|.|.++..+|+|.|+|.|.|..| ..
T Consensus 164 p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~g~~ 242 (250)
T 2fbo_J 164 ANANVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASF-SGARNLVIRAAKITDAGRVWCELATGQGELDAD 242 (250)
T ss_dssp TTCEEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEE-ETTTEEEECSCCGGGCEEEEEEEESSSSGGGEE
T ss_pred CCCeeEEEeCCCcccccccCcceeEeccCCCCccccCceEeccccc-CCccEEEEecCCcccCEEEEEEecCCccccCcc
Confidence 999999999998875432111 111 1224799999999999999999999554 45
Q ss_pred EEEEEEE
Q psy7042 266 SGTFTIN 272 (2245)
Q Consensus 266 ~~~~~l~ 272 (2245)
..++.|.
T Consensus 243 ~~~~~l~ 249 (250)
T 2fbo_J 243 RSSTILK 249 (250)
T ss_dssp EEEEEEE
T ss_pred ceeEEEe
Confidence 5555554
No 195
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.76 E-value=5.8e-18 Score=194.06 Aligned_cols=179 Identities=13% Similarity=0.147 Sum_probs=126.3
Q ss_pred CCcceEEeCCCeEEEEEEEeeecCC---ceEEEECCeec-----------cC------CCeEEEEE---cCcEEEEEEee
Q psy7042 96 PLKDLVVPLGKLLTLQCEATGTPVP---KCRWLRNGREI-----------SS------GARYRVET---AGGVFRLHFNE 152 (2245)
Q Consensus 96 ~~~~~~v~~G~~v~L~C~~~g~p~~---~i~W~~~g~~l-----------~~------~~~~~~~~---~~~~~~L~i~~ 152 (2245)
|+..+.+.+|++|+|.|.+.+.|.+ .|.|+|++... .. ..|..... ..+..+|.|.+
T Consensus 10 P~~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~ 89 (226)
T 4f80_A 10 PSGPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHN 89 (226)
T ss_dssp CSSCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESS
T ss_pred CCCCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEee
Confidence 3455889999999999999876654 59999976421 11 12333332 23467899999
Q ss_pred eccCCCeEEEEEEEcCcccceeEEEEEecCCCeeecCCCceEEcCCCeEEEEEEEec-CCCceEEEeeCceeeecCCceE
Q psy7042 153 VTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAG-DQPMEVSLTKNGRVVQSDDRFK 231 (2245)
Q Consensus 153 ~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~P~~~~~~~~~~v~~G~~~~l~C~~~g-~p~~~i~W~~~g~~l~~~~~~~ 231 (2245)
++.+|+|.|+|.|.|..|.....+.+.+ ++.+...+....+.+|+.+.|.|.+.| .|.|.|+|+|++..+.......
T Consensus 90 v~~~D~G~Y~C~a~n~~~~~~~~v~~~~--~~~~~~~~~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~~~~~~ 167 (226)
T 4f80_A 90 VTASDSGKYLCYFQDGDFYEKALVELKV--AALGSDLHVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTVEAP 167 (226)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEE--EBCCCCCEEEEEEEETTEEEEEEEEEEEBSCCEEEEECTTSCBCCCEECC
T ss_pred CchHHCeeEEEEEECCCcEEEEEEEEee--ccceecccceeeeccCCceeeEEEeccCCCCCEEEEEECCceEcCCCceE
Confidence 9999999999999998876665544444 444444555677889999999999987 5999999999654443332222
Q ss_pred EEEe--CCeEEEEEcccCccCceeEEEEEEcCCcceEEEEEEEEecC
Q psy7042 232 FTVL--DDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGL 276 (2245)
Q Consensus 232 ~~~~--~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 276 (2245)
+... +....+.+.+++.+|+|.|+|.|.|..|....++.|.|.++
T Consensus 168 ~~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~~v~v~ep 214 (226)
T 4f80_A 168 VVADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGLEKTASISIADP 214 (226)
T ss_dssp CEECTTSCEEEEEEEEECC----CEEEEEEETTTTEEEEEEECCCTT
T ss_pred EEECCCCcEEEEEEEEechhcCcEEEEEEEeCCCCeEEEEEEEECCC
Confidence 2222 22234556677889999999999999999999999988764
No 196
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.76 E-value=1.8e-17 Score=188.11 Aligned_cols=183 Identities=20% Similarity=0.307 Sum_probs=154.8
Q ss_pred CCCeeecCCCceEEcCCCeEEEEEEEecCCCceEEEeeCceeeecC--CceEEEEeCCeEEEEEcccCccCceeEEEEEE
Q psy7042 182 TPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSD--DRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLS 259 (2245)
Q Consensus 182 ~~P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~i~W~~~g~~l~~~--~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 259 (2245)
.+|.| ..|.++.+.+|+.+.|.|.+.|.|.|.|.|+|+|..+... .++.+...+....|.|.++..+|+|.|+|.|.
T Consensus 18 ~~P~~-~~p~~~~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 96 (215)
T 3mtr_A 18 YAPKL-QGPVAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAV 96 (215)
T ss_dssp EEEEE-ECCSEEEECTTCCEEEEEEEEEESCCEEEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEEEE
T ss_pred cCCcc-cCCceEEEECCCCEEEEEEEeecCCCEEEEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEEEE
Confidence 46777 5677799999999999999999999999999999999766 45666666677899999999999999999999
Q ss_pred cCCcceEEEEEEEEecCCCCCCCCcccceeeccceEEEecCCCCCCCceeEEEEEEEEecCCCceEEeeec----cCcce
Q psy7042 260 NSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTT----CHDTT 335 (2245)
Q Consensus 260 n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~s~~~~w~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 335 (2245)
|..|..+..+.|.|..+|.+|.. +.+ .....++.++|.+|...++.++..|.+++.......|...... .....
T Consensus 97 n~~g~~~~~~~l~v~~~P~~p~~-~~~-~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~ 174 (215)
T 3mtr_A 97 NRIGQESLEFILVQADTPSSPSI-DQV-EPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGI 174 (215)
T ss_dssp CSSCEEEEEEEEEECCCCCCCEE-EEE-EEETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEEEEEHHHHHHHTE
T ss_pred ECCCceEEEEEEEECCCCCCCcc-eEE-EEecceEEEEEecCCccCCCceEEEEEEEEECCCCccccccccccccccccc
Confidence 99999999999999988877643 222 3556789999999888899999999999998877777654332 22378
Q ss_pred EEEcCCCCCCEEEEEEEEEecCCCCCCCCCCC
Q psy7042 336 FIVQGLTEGQEYLFHVMAVNENGMGPPLEGIN 367 (2245)
Q Consensus 336 ~~i~~l~~~~~~~~~c~a~n~~g~~~~~~~~~ 367 (2245)
+.|.+|.+++.|.|+|.|.|..|.+.++..+.
T Consensus 175 l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~ 206 (215)
T 3mtr_A 175 VTIVGLKPETTYAVRLAALNGKGLGEISAASE 206 (215)
T ss_dssp EEEECCCTTCEEEEEEEEEESSCBCCCCCCEE
T ss_pred EEECCCCCCCEEEEEEEEEeCCcccCccccee
Confidence 99999999999999999999999998876543
No 197
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.76 E-value=3.3e-18 Score=193.57 Aligned_cols=172 Identities=16% Similarity=0.226 Sum_probs=130.4
Q ss_pred eecCCcceEEeCCCeEEEEEEEeeecCCceEEEEC--Ceec------------cCCCeEEEEEcCcEEEEEEeeeccCCC
Q psy7042 93 FIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRN--GREI------------SSGARYRVETAGGVFRLHFNEVTDVDN 158 (2245)
Q Consensus 93 ~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~--g~~l------------~~~~~~~~~~~~~~~~L~i~~~~~~d~ 158 (2245)
++. |..+.+.+|++++|.|.+.+.|.+.|.|+|+ |..+ ....|+.+...++...|.|.+++.+|+
T Consensus 4 v~q-p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 82 (210)
T 1lk3_L 4 LTQ-PPALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDT 82 (210)
T ss_dssp EEC-CSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EEC-CCcEEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHC
Confidence 445 7788999999999999999998889999984 3222 123578777777778899999999999
Q ss_pred eEEEEEEEcCccccee-EEEEEecC---CCeeecCCCceEEcCCCeEEEEEEEec-CCCc-eEEEeeCceeeecCCce--
Q psy7042 159 GDYTCEAYNSVGFAHT-SSRVKIGT---PPRIDRMPNALYIPEGDNTKVKIFYAG-DQPM-EVSLTKNGRVVQSDDRF-- 230 (2245)
Q Consensus 159 G~Y~C~a~n~~g~~~~-~~~l~V~~---~P~~~~~~~~~~v~~G~~~~l~C~~~g-~p~~-~i~W~~~g~~l~~~~~~-- 230 (2245)
|.|+|.|.|..+.... .+.|.|.. +|.+...+....+.+|+.++|.|.+.| .|++ .|.|+|||..+......
T Consensus 83 G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~ 162 (210)
T 1lk3_L 83 AIYFCQQSWNGPLTFGAGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSV 162 (210)
T ss_dssp EEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEECCTTEEEEE
T ss_pred eEEEEEEEcCCCceeCCCEEEEEcCCCcCCeEEEECCchhhccCCcEEEEEEEEeEeCCceEEEEEeCCccCCCCceEcc
Confidence 9999999998775433 44678865 677766554444558999999999987 4553 89999999988654111
Q ss_pred EEEEe-CC----eEEEEEcccCccCceeEEEEEEcCCcce
Q psy7042 231 KFTVL-DD----YIIIFIKEIRKEDAGDYTVNLSNSSGSV 265 (2245)
Q Consensus 231 ~~~~~-~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 265 (2245)
..... ++ .+.|.|.++..+|+|.|+|.|.|.....
T Consensus 163 ~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 202 (210)
T 1lk3_L 163 TDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSSS 202 (210)
T ss_dssp CCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSS
T ss_pred CCccCCCCCEEEEEEEEEChHHhccCCcEEEEEEecCCCC
Confidence 01111 11 2379999999999999999999987643
No 198
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.76 E-value=5.7e-18 Score=194.09 Aligned_cols=184 Identities=18% Similarity=0.159 Sum_probs=133.7
Q ss_pred ecCCcceEEeCCCeEEEEEEEeeecC-----CceEEEECCeecc---------C------CCeEEEEEc---CcEEEEEE
Q psy7042 94 IVPLKDLVVPLGKLLTLQCEATGTPV-----PKCRWLRNGREIS---------S------GARYRVETA---GGVFRLHF 150 (2245)
Q Consensus 94 ~~~~~~~~v~~G~~v~L~C~~~g~p~-----~~i~W~~~g~~l~---------~------~~~~~~~~~---~~~~~L~i 150 (2245)
..++..+.+.+|+.++|.|.+.+.|. +.|.|+|++..+. . ..|..+..+ .+...|.|
T Consensus 5 ~~p~~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I 84 (222)
T 3sbw_C 5 TVPKDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQI 84 (222)
T ss_dssp BCSCSEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEE
T ss_pred ecCCccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEE
Confidence 34556678999999999999987774 3799999763321 0 134444322 24567999
Q ss_pred eeeccCCCeEEEEEEEcCcccceeEEEEEecCCCeeecCCCceEEcCCCeEEEEEEEecCCCceEEEeeC-ceeeecCCc
Q psy7042 151 NEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKN-GRVVQSDDR 229 (2245)
Q Consensus 151 ~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~i~W~~~-g~~l~~~~~ 229 (2245)
.+++.+|+|.|+|.|.| .|.....+.|.|..+|..........+.+|+.++|.|.+.|.|.|.|+|+++ |..+.....
T Consensus 85 ~~v~~~D~G~Y~C~~~~-~~~~~~~~~l~V~~~~~~~~~~~~~~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~~~~~~~ 163 (222)
T 3sbw_C 85 TDVKLQDAGVYRCMISY-GGADYKRITVKVNAPYNKINQRILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTT 163 (222)
T ss_dssp SSCCGGGCEEEEEEEES-SSEEEEEEEEEEEBCCCCCEEEEEEEETTTTEEEEEEEEEEBSCCEEEEEETTCCEECCEEE
T ss_pred cCcccccCeEEEEEEEe-CCCceeEEEEEEECCCCCCCceeeeeecCCCcEEEEEEecCCCCCeEEEEECCCceecCccc
Confidence 99999999999999999 6667778889999877644333333678999999999999999999999998 666543322
Q ss_pred eEEEEe--CCeEEEEEcccCccCceeEEEEEEcCCcceEEEEEEEEecCCC
Q psy7042 230 FKFTVL--DDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPG 278 (2245)
Q Consensus 230 ~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~ 278 (2245)
..+... +....+.+..+..+|+|.|+|.|.|..|....++.|.|.+.|.
T Consensus 164 ~~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~p~ 214 (222)
T 3sbw_C 164 TTNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPEENHTAELVIPELPL 214 (222)
T ss_dssp EEECC----CEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCCC--
T ss_pred eEEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCccceeeEEEEEecCCcc
Confidence 211111 1112222334567899999999999999999999999986653
No 199
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.76 E-value=1.4e-17 Score=193.90 Aligned_cols=182 Identities=17% Similarity=0.252 Sum_probs=140.2
Q ss_pred CCcceEEeCCCeEEEEEEEeeec--CCceEEEEC--Ceecc-----------------CCCeEEEEEc--CcEEEEEEee
Q psy7042 96 PLKDLVVPLGKLLTLQCEATGTP--VPKCRWLRN--GREIS-----------------SGARYRVETA--GGVFRLHFNE 152 (2245)
Q Consensus 96 ~~~~~~v~~G~~v~L~C~~~g~p--~~~i~W~~~--g~~l~-----------------~~~~~~~~~~--~~~~~L~i~~ 152 (2245)
.|..+.+.+|++|+|.|.+.|.| .+.|.|+|+ +..+. ...|+.+..+ ++..+|.|.+
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (256)
T 1nqb_A 6 QSGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSS 85 (256)
T ss_dssp ECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECS
T ss_pred CCCCeeecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEECc
Confidence 34567899999999999998875 678999994 32210 1357777653 4567899999
Q ss_pred eccCCCeEEEEEEEcCccc-----ceeEEEEEecCCCeeecCCCceEEcCCCeEEEEEEEecCCCc-----eEEEee--C
Q psy7042 153 VTDVDNGDYTCEAYNSVGF-----AHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPM-----EVSLTK--N 220 (2245)
Q Consensus 153 ~~~~d~G~Y~C~a~n~~g~-----~~~~~~l~V~~~P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~-----~i~W~~--~ 220 (2245)
++.+|+|.|.|.|.|..|. ....+.|.|..+|.+...|..+.+.+|++++|.|.+.+.|++ .+.||| +
T Consensus 86 v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~ 165 (256)
T 1nqb_A 86 LTSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVSSDIELTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKP 165 (256)
T ss_dssp CCGGGCEEEEEEECCTTSSSSCSEECCCEEEEECCCCCEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECT
T ss_pred CChhhCEEEEEEEeeccCccceeEEcCceeeeecccccEEecCcEEEEecCCcEEEEeEecCcccccccceEEEEEEECC
Confidence 9999999999999998663 123567999988888888888999999999999999998865 999999 6
Q ss_pred ceeee------------cCCceEEEEeCCeEEEEEcccCccCceeEEEEEEcCCcc-eEEEEEEEEecCC
Q psy7042 221 GRVVQ------------SDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGS-VSGTFTINITGLP 277 (2245)
Q Consensus 221 g~~l~------------~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~V~~~p 277 (2245)
|..+. ...++.+........|.|.++..+|+|.|+|.|.|.... ......|.|..++
T Consensus 166 g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~~~~ 235 (256)
T 1nqb_A 166 GQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEIKRAA 235 (256)
T ss_dssp TSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECC--
T ss_pred CCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCEEEEEEEccCCceEECCCEEEEEECCC
Confidence 66442 134565555566778999999999999999999986432 2345668876543
No 200
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.76 E-value=6.4e-18 Score=195.37 Aligned_cols=191 Identities=22% Similarity=0.376 Sum_probs=150.2
Q ss_pred CCCceeccC----CceEEcCCCeEEEEEEecCcCCCeEEEeeCCEeccCCceE---EEEecCcEEEEEEeeeccCCCeEE
Q psy7042 1696 EKPDFIVPL----KDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARY---RVETAGGVFRLHFNEVTDVDNGDY 1768 (2245)
Q Consensus 1696 ~~p~~~~~~----~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~~~~l~~~~~~---~~~~~~~~~~L~i~~v~~~d~G~Y 1768 (2245)
.+|.|...+ ....+.+|+++.|.|.+.+.|.+.+.|++++..+....++ .... +...|.|.+++.+|+|.|
T Consensus 14 ~~P~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~--~~~~L~i~~~~~~d~G~Y 91 (231)
T 3ojm_B 14 RAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRN--QHWSLIMESVVPSDKGNY 91 (231)
T ss_dssp EEEEESCGGGGCCSCEEEETTSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEG--GGTEEEECSCCGGGCEEE
T ss_pred cCCccccccccCceeEEEccCCCEEEEEecccCCCCeEEEEECCccccccccccceeeec--CcceEEEecCCcccCEEE
Confidence 456665554 6788999999999999999999999999999998655432 2222 234599999999999999
Q ss_pred EEEEecCceeeEEEEEEEecCC----Ccc-ccCCCceEEcCCCeEEEEEEEeccCCcEEEEEE----CCEEeecCCceEE
Q psy7042 1769 TCEAYNSVGFAHTSSRVKIGTP----PRI-DRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTK----NGRVVQSDDRFKF 1839 (2245)
Q Consensus 1769 ~C~~~n~~g~~~~~~~l~V~~~----p~~-~~~~~~~~~~~g~~~~l~C~~~~~p~~~v~W~~----~g~~l~~~~~~~~ 1839 (2245)
+|.+.|..|.......|.|..+ |.+ ...+....+.+|+.+.|.|.+.|.|.+.+.|++ +|..+........
T Consensus 92 ~C~~~n~~~~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~ 171 (231)
T 3ojm_B 92 TCVVENEYGSINHTYHLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYL 171 (231)
T ss_dssp EEEEEETTEEEEEEEEEEEECCCCCCCEECTTCSCCEEEETTCCEEEECCEECSSCCEEEEEEECCBTTBSBCTTSCBCE
T ss_pred EEEEecccCcccccEEEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCCccccCCCcceE
Confidence 9999999998888888888753 222 234567889999999999999999999999999 8877754432211
Q ss_pred EE-------cCCeEEEEEcccCcccceEEEEEEEcCCeeeEEEEEEEEeCCCCCCC
Q psy7042 1840 TV-------LDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPI 1888 (2245)
Q Consensus 1840 ~~-------~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~~ 1888 (2245)
.. ......|.|.++..+|+|.|+|.|.|..|..+..+.|.|...|.+|.
T Consensus 172 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~p~ 227 (231)
T 3ojm_B 172 KVLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIGQANQSAWLTVLPKQQAPG 227 (231)
T ss_dssp EEEEECSTTCSCTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC----
T ss_pred eEecccccccCCccEEEEecCCHHHCeEEEEEEEeccceEeeEEEEEEecCCCCCc
Confidence 11 11224699999999999999999999999999999999998887765
No 201
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.76 E-value=4.2e-18 Score=194.21 Aligned_cols=185 Identities=23% Similarity=0.376 Sum_probs=147.6
Q ss_pred CCCCceeccCCceEEcCCCeEEEEEEecCcCCCeEEEeeCCEeccCCc--eEEEEecCcE--EEEEEeeeccCCCeEEEE
Q psy7042 1695 GEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGA--RYRVETAGGV--FRLHFNEVTDVDNGDYTC 1770 (2245)
Q Consensus 1695 ~~~p~~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~~~~l~~~~--~~~~~~~~~~--~~L~i~~v~~~d~G~Y~C 1770 (2245)
..+|.|...+..+.+.+|++++|.|.+.+.|.+.+.|+++|..+.... ..++...++. ..|.|.+++.+|+|.|+|
T Consensus 7 ~~~P~i~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C 86 (217)
T 2vr9_A 7 YQSPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYWC 86 (217)
T ss_dssp CCCCEEEECCCCEEECTTSCEEECCEEECSSCCEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEEEE
T ss_pred cCCCEEecCCCceEEeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceEEE
Confidence 468899998999999999999999999999999999999999886532 2222223322 234789999999999999
Q ss_pred EEecCceeeE-EEEEEEecC-CCccccCCCceEEcCCCeEEEEEEE-eccCCcEEEEEECCEEeecC--------CceEE
Q psy7042 1771 EAYNSVGFAH-TSSRVKIGT-PPRIDRMPNALYIPEGDNTKVKIFY-AGDQPMEVSLTKNGRVVQSD--------DRFKF 1839 (2245)
Q Consensus 1771 ~~~n~~g~~~-~~~~l~V~~-~p~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~v~W~~~g~~l~~~--------~~~~~ 1839 (2245)
.+.|..|... ....|.|.. +|.+...+....+.+|+.+.|.|.+ .|.|.+.+.|+++|..+... .++.+
T Consensus 87 ~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~ 166 (217)
T 2vr9_A 87 VAKNRVGQAVSRHASLQIAVLRDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASSRVRI 166 (217)
T ss_dssp EEEETTEEEECCCEEEEECEECCSCSBCCCCEEECTTSCEEECCBCCCEESCCEEEEEETTEEECCCCCC---CCCSEEE
T ss_pred EEecCCCccccccceEEEEEeCCCcEECCCccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCcccccccccCCcEEe
Confidence 9999888764 356777765 6667777778889999999999999 89999999999999998733 22222
Q ss_pred EEcCCeEEEEEcccCcccceEEEEEEEcCCeeeEEEEEEEEeC
Q psy7042 1840 TVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITG 1882 (2245)
Q Consensus 1840 ~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 1882 (2245)
. ....|.|.++..+|+|.|+|.|.|..|.......+.+..
T Consensus 167 ~---~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~~lv~~ 206 (217)
T 2vr9_A 167 V---DGGNLLISNVEPIDEGNYKCIAQNLVGTRESSYAKLIVQ 206 (217)
T ss_dssp E---TTTEEEESSCCSTTCEEEEEEEEETTEEEECCCEEEEEC
T ss_pred c---CCCcEEEeeCCHHHCeEEEEEEEcccceeccccEEEEEE
Confidence 1 123699999999999999999999999888776655543
No 202
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.76 E-value=2.3e-18 Score=195.10 Aligned_cols=176 Identities=11% Similarity=0.196 Sum_probs=135.5
Q ss_pred CceecCCcceEEeCCCeEEEEEEEeeecCCceEEEEC--Ceecc------------CCCeEEEEEcCcEEEEEEeeeccC
Q psy7042 91 PDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRN--GREIS------------SGARYRVETAGGVFRLHFNEVTDV 156 (2245)
Q Consensus 91 P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~--g~~l~------------~~~~~~~~~~~~~~~L~i~~~~~~ 156 (2245)
|.++.++ .+.+.+|+.++|.|.+. |.+.|.|+|+ +..+. ...|+.+...++..+|.|.+++.+
T Consensus 2 ~~v~~~~-~~~v~~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 78 (211)
T 3tv3_L 2 SALTQPP-SASGSPGQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTD 78 (211)
T ss_dssp -CCBCCS-EEEECTTCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGG
T ss_pred ceEEeCc-eEEEcCCCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChh
Confidence 3456666 78999999999999998 8889999994 33221 335787777777889999999999
Q ss_pred CCeEEEEEEEcCcc--cceeEEEEEec----CCCeeecCCCceEEcCCCeEEEEEEEecC--CCceEEEeeCceeeecCC
Q psy7042 157 DNGDYTCEAYNSVG--FAHTSSRVKIG----TPPRIDRMPNALYIPEGDNTKVKIFYAGD--QPMEVSLTKNGRVVQSDD 228 (2245)
Q Consensus 157 d~G~Y~C~a~n~~g--~~~~~~~l~V~----~~P~~~~~~~~~~v~~G~~~~l~C~~~g~--p~~~i~W~~~g~~l~~~~ 228 (2245)
|+|.|+|.|.|..+ .....+.|.|. .+|.+...+....+.+|+.++|.|.+.|. |.+.+.|+|||..+..+.
T Consensus 79 D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~ 158 (211)
T 3tv3_L 79 DEAVYYCGSLVGNWDVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGV 158 (211)
T ss_dssp GCEEEEEEEEETTTEEEECCCEEEEECCSCCBCCEEEEECCCHHHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEECTTE
T ss_pred HCEEEEEEEecCCCceeECCCceEEEeCCCCcCCeeEecCCchhhhcCCCeEEEEEeeeecCCCeEEEEEECCeecCCCc
Confidence 99999999999887 34456788888 67888777766666689999999999885 358999999999886421
Q ss_pred ceE--EEEeCC----eEEEEEcccCccCceeEEEEEEcCCcceEEEE
Q psy7042 229 RFK--FTVLDD----YIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTF 269 (2245)
Q Consensus 229 ~~~--~~~~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 269 (2245)
... ....+. ...|.|.++..+|+|.|+|.|.|..+....++
T Consensus 159 ~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~~~~~~~ 205 (211)
T 3tv3_L 159 ETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTV 205 (211)
T ss_dssp EECCCEECTTSSEEEEEEEEECHHHHHHSSCEEEEEEETTEEEEEEE
T ss_pred ccCCceECCCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCCCEEeec
Confidence 100 011111 14699999999999999999999987665554
No 203
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=99.76 E-value=7.7e-18 Score=189.92 Aligned_cols=187 Identities=26% Similarity=0.345 Sum_probs=149.2
Q ss_pred EecCCCCCcccEEeeeeCceEEEEecCCCCCCCCccceEEEeeeecCCCceEEeccee----eeceEEEecCCCCceeeE
Q psy7042 898 VLDRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYV----TTPFVRVRNLAIGSTYEF 973 (2245)
Q Consensus 898 ~~~~P~~p~~l~~~~~~~~~~~l~W~~p~~~~g~~i~~y~i~~~~~~~~~~~~~~~~~----~~~~~~i~~L~p~~~y~~ 973 (2245)
..++|.+|.++.+...+. ++.|+|++|.+.+|.++.+|.|+|+......|....... ....+.+.+|.|++.|.|
T Consensus 5 ~~~~P~~P~~~~~~~~~~-s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~ 83 (209)
T 2vkw_A 5 QADTPSSPSIDQVEPYSS-TAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAV 83 (209)
T ss_dssp CCCCCCCCEEEEEEECSS-CEEEEEECCSCCCSSCCCEEEEEEEESSCCCCEEEEEEHHHHHHHSEEEECCCCTTCEEEE
T ss_pred ccCCCcCCcccEeeeccC-eEEEEEcCCCcCCCcceeEEEEEEeeCCCCCceEeEeeccCCCccceEEeCCCCCCCeEEE
Confidence 457999999999988777 689999999887887799999999988888887665432 356899999999999999
Q ss_pred EEEEEeccccCCCccccCcccccCCCC-CCCCCCCCeeEeecCCeEEEEecCCCCCCCCccceEEEEEEecCCccceecc
Q psy7042 974 RVMAENQYGLSKPALTIDPIKAKHPFD-VPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKAS 1052 (2245)
Q Consensus 974 ~v~a~n~~g~~~~s~~~~~~~~~t~~~-~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~ 1052 (2245)
+|+|.|..|.|+++. .+.+.+... .|.+|..+.+...+.+++.|+|.+|. ..+++|.+|.|+|+. +...|....
T Consensus 84 ~V~A~n~~G~~~~s~---~~~~~T~~~~~P~~P~~~~~~~~~~~sv~l~W~~p~-~~~~~i~~Y~v~~~~-~~~~~~~~~ 158 (209)
T 2vkw_A 84 RLAALNGKGLGEISA---ASEFKTQPVREPSAPKLEGQMGEDGNSIKVNLIKQD-DGGSPIRHYLVRYRA-LSSEWKPEI 158 (209)
T ss_dssp EEEEEETTEECCCCC---CEEEECCCSCSCCCCEEEEEECTTSSCEEEEEECCC-CTTSCCCEEEEEEEE-TTSCCCCCE
T ss_pred EEEEEcCCcccCCcc---cccccccCCCCCCCCcccccccccCCeEEEEEECcc-cCCCCCceEEEEEEC-CCCCCceee
Confidence 999999999988773 444555554 78888888888889999999999984 445679999999998 544554332
Q ss_pred ccccCCcceeEEEEeecccccCCccCchhhhhhhhhcccccccccccCCcEEEEEEEEEecCCCCCCCCC
Q psy7042 1053 MAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSS 1122 (2245)
Q Consensus 1053 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~v~A~n~~G~~~~s~~ 1122 (2245)
.. +..... ++|.+|.+++.|.|+|+|.|..|.|+++..
T Consensus 159 ~~--~~~~~~------------------------------~~i~~L~p~t~Y~~~V~A~n~~G~s~~S~~ 196 (209)
T 2vkw_A 159 RL--PSGSDH------------------------------VMLKSLDWNAEYEVYVVAENQQGKSKAAHF 196 (209)
T ss_dssp EE--CTTCCE------------------------------EEECSCCTTCEEEEEEEEEETTEECCCEEE
T ss_pred ec--CCCccE------------------------------EEecCCCCCCEEEEEEEEEeCCccCCcchh
Confidence 11 111111 269999999999999999999999887643
No 204
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.75 E-value=6.3e-18 Score=192.96 Aligned_cols=178 Identities=11% Similarity=0.189 Sum_probs=131.4
Q ss_pred CceecCCcceEEeCCCeEEEEEEEeee-cCCceEEEECC--ee-------------cc---CCCeEEEEEcCcEEEEEEe
Q psy7042 91 PDFIVPLKDLVVPLGKLLTLQCEATGT-PVPKCRWLRNG--RE-------------IS---SGARYRVETAGGVFRLHFN 151 (2245)
Q Consensus 91 P~~~~~~~~~~v~~G~~v~L~C~~~g~-p~~~i~W~~~g--~~-------------l~---~~~~~~~~~~~~~~~L~i~ 151 (2245)
|.++.+| .+.+.+|++++|.|.+.+. |.+.|.|+|.+ .. .. ...|+.+...++..+|.|.
T Consensus 2 ~~v~~~p-~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 80 (218)
T 3s96_B 2 LVLTQSS-SASFSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSIS 80 (218)
T ss_dssp CSEECCS-EEEEETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEES
T ss_pred CeEEeCC-cEEECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEc
Confidence 4566777 8899999999999999998 89999999932 11 01 1237777667777889999
Q ss_pred eeccCCCeEEEEEEEcCcc-----cceeEEEEEec----CCCeeecCCCceEEcCCCeEEEEEEEec-CCCc-eEEEeeC
Q psy7042 152 EVTDVDNGDYTCEAYNSVG-----FAHTSSRVKIG----TPPRIDRMPNALYIPEGDNTKVKIFYAG-DQPM-EVSLTKN 220 (2245)
Q Consensus 152 ~~~~~d~G~Y~C~a~n~~g-----~~~~~~~l~V~----~~P~~~~~~~~~~v~~G~~~~l~C~~~g-~p~~-~i~W~~~ 220 (2245)
+++.+|+|.|+|.|.|..| .....+.|.|. .+|.+...+....+..|+.++|.|.+.| .|.+ .|+|+||
T Consensus 81 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~~~~v~L~C~~~g~~p~~~~v~W~k~ 160 (218)
T 3s96_B 81 NIQPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVFPPSSEELKENKATLVCLISNFSPSGVTVAWKAN 160 (218)
T ss_dssp SCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEET
T ss_pred cCCcccCEEEEEEEecCCCCceeEEEcCcEEEEEecCCCCCceEEeeCCCcccccCCcEEEEEEECcccCCCeEEEEEEC
Confidence 9999999999999999876 33345678887 5677766555555667899999999988 5766 8999999
Q ss_pred ceeeecCCceE--EEEeCC---eEEEEEcccCccCceeEEEEEEcCCcceEEEE
Q psy7042 221 GRVVQSDDRFK--FTVLDD---YIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTF 269 (2245)
Q Consensus 221 g~~l~~~~~~~--~~~~~~---~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 269 (2245)
|..+..+.... ....+. .+.|.|.....+|+|.|+|.|.|..+....++
T Consensus 161 g~~l~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~ 214 (218)
T 3s96_B 161 GTPITQGVDTSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGDTVEKSL 214 (218)
T ss_dssp TEEC--------------CEEEEEEEEEEHHHHHTCSCEEEEEEETTEEEEEEE
T ss_pred CEECcCceecCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCCcccccc
Confidence 99986532111 001111 13488888888899999999999987665443
No 205
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.75 E-value=3.5e-18 Score=194.43 Aligned_cols=181 Identities=21% Similarity=0.352 Sum_probs=143.7
Q ss_pred CceeccCCceEEcCCCeEEEEEEecCcCCCeEEEeeCCEec------------cCCceEEEEecCcEEEEEEeeeccCCC
Q psy7042 1698 PDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREI------------SSGARYRVETAGGVFRLHFNEVTDVDN 1765 (2245)
Q Consensus 1698 p~~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~~~~l------------~~~~~~~~~~~~~~~~L~i~~v~~~d~ 1765 (2245)
+.|..++..+.+.+|+++.|.|.+.+.|.+.+.|++++..+ ....++.+.. ..|.|.+++.+|+
T Consensus 2 ~~v~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~----~~L~i~~v~~~D~ 77 (212)
T 1f97_A 2 GSVYTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSS----SGITFSSVTRKDN 77 (212)
T ss_dssp CEEECSCSEEEEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEET----TEEEESCCCGGGC
T ss_pred ceEEecCCCeEEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEeec----eeEEEcccCcccC
Confidence 34556677889999999999999999899999999987652 1234444433 3599999999999
Q ss_pred eEEEEEEecCce--eeEEEEEEEecCCCccccCCCceEEcCCCeEEEEEE-EeccCCcEEEEEECCE-EeecCCc-----
Q psy7042 1766 GDYTCEAYNSVG--FAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIF-YAGDQPMEVSLTKNGR-VVQSDDR----- 1836 (2245)
Q Consensus 1766 G~Y~C~~~n~~g--~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~-~~~~p~~~v~W~~~g~-~l~~~~~----- 1836 (2245)
|.|+|.+.|..| .....+.|.|..+|.+...+....+.+|+.+.|.|. +.+.|.+.+.|++++. .+.....
T Consensus 78 G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~~~~~~~ 157 (212)
T 1f97_A 78 GEYTCMVSEEGGQNYGEVSIHLTVLVPPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAF 157 (212)
T ss_dssp EEEEEEEEETTSSSEEEEEEEEEEEBCCCCCEEECCSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC-----CBSC
T ss_pred eEEEEEEEccCCCcccEEEEEEEEEcCCCCcccCCccccCCCCeEEEEEEcccCcCCCEEEEEeCCcccccccccccccc
Confidence 999999999876 566778899999988766566678899999999999 7899999999999999 7754432
Q ss_pred --eEEEEcCCeEEEEEcccCcccceEEEEEEEcCCeee--EEEEEEEEeC
Q psy7042 1837 --FKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV--SGTFTINITG 1882 (2245)
Q Consensus 1837 --~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~--~~~~~l~v~~ 1882 (2245)
...........|.|.++..+|+|.|+|.|.|..|.. +..+.|.|..
T Consensus 158 ~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~V~~ 207 (212)
T 1f97_A 158 MNSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAVE 207 (212)
T ss_dssp SSSCEEECTTTCCEEESSCCGGGCEEEEEEEECSSSCCEECCCEEEEEES
T ss_pred cCceeEecCCCceEEEEecChhhCcEEEEEEccccCCccccceEEEEEEE
Confidence 122333445679999999999999999999999987 5566777654
No 206
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.75 E-value=1.5e-17 Score=188.96 Aligned_cols=171 Identities=23% Similarity=0.331 Sum_probs=143.1
Q ss_pred CCCCceeccCCceEEcCCCeEEEEEEecCcCCCeEEEeeCCEeccCCceEEEEecCcEEEEEEeeeccCCCeEEEEEEec
Q psy7042 1695 GEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYN 1774 (2245)
Q Consensus 1695 ~~~p~~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n 1774 (2245)
...+.|...+.++.+.+|+++.|.|.+.+.|.+.+.|++++..+.... ...|.|.+++.+|+|.|+|.+.|
T Consensus 16 ~~~~~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~---------~~~L~i~~v~~~d~G~Y~C~~~n 86 (218)
T 3k0w_A 16 PRGSKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNGN---------TSELIFNAVHVKDAGFYVCRVNN 86 (218)
T ss_dssp ---CCEEECCCCEEEETTSBEEEECEETTTTSSEEEEEETTEECTTCC---------SSEEEETTCCGGGCEEEEEEEEC
T ss_pred CCCCEEEECCCCeEEeCCCcEEEEeeecCCCCCEEEEEECCEECCCCC---------CCEEEEccCChhhCeEeEEEEEc
Confidence 457788888899999999999999999999999999999999886542 23499999999999999999999
Q ss_pred Cceee-EEEEEEEecCC---------------CccccCCCceEEcCCCeEEEEEEEeccCCcEEEEEECCEEeecCCceE
Q psy7042 1775 SVGFA-HTSSRVKIGTP---------------PRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFK 1838 (2245)
Q Consensus 1775 ~~g~~-~~~~~l~V~~~---------------p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~v~W~~~g~~l~~~~~~~ 1838 (2245)
..|.. ...+.|.|... |.+...+....+.+|+.+.|.|.+.|.|.+.+.|+++|..+.....
T Consensus 87 ~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~~~~~~~~~~-- 164 (218)
T 3k0w_A 87 NFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHETK-- 164 (218)
T ss_dssp TTCCEECCCEEEEEECCCGGGCTTCCSBCCSSCEEEECCCCEEECTTCCEEEECEEEBSSCCEEEEEETTEECTTCCS--
T ss_pred CCCCceeeEEEEEEEccCcccccccccccCCCceEEECCCceeecCCCcEEEEEEecccCCCeEEEEECCEECCCCCC--
Confidence 87754 44577777655 5666677788899999999999999999999999999998865432
Q ss_pred EEEcCCeEEEEEcccCcccceEEEEEEEcCCee-eEEEEEEEEeCC
Q psy7042 1839 FTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGS-VSGTFTINITGL 1883 (2245)
Q Consensus 1839 ~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~v~~~ 1883 (2245)
..|.|.++..+|+|.|+|.|.|..|. .+..+.|.|...
T Consensus 165 -------~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~ 203 (218)
T 3k0w_A 165 -------KLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIIDEL 203 (218)
T ss_dssp -------SEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEECC-
T ss_pred -------CEEEEeecChhcCEEEEEEEEcCCCCceeeeEEEEEeCC
Confidence 36999999999999999999999886 556778888654
No 207
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.75 E-value=2.3e-17 Score=192.31 Aligned_cols=177 Identities=18% Similarity=0.273 Sum_probs=134.7
Q ss_pred cceEEeCCCeEEEEEEEeeec--CCceEEEECC--eec-----------------cCCCeEEEEEc--CcEEEEEEeeec
Q psy7042 98 KDLVVPLGKLLTLQCEATGTP--VPKCRWLRNG--REI-----------------SSGARYRVETA--GGVFRLHFNEVT 154 (2245)
Q Consensus 98 ~~~~v~~G~~v~L~C~~~g~p--~~~i~W~~~g--~~l-----------------~~~~~~~~~~~--~~~~~L~i~~~~ 154 (2245)
..+.+.+|++++|.|.+.|.| .+.|.|+|++ ..+ ....|+.+..+ ++..+|.|.+++
T Consensus 10 ~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 89 (247)
T 2ghw_B 10 GGGVVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLR 89 (247)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCEEEecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcCC
Confidence 457899999999999999877 6789999842 111 12357777653 456789999999
Q ss_pred cCCCeEEEEEEEcCccc--ceeEEEEEecCC---------------CeeecCCCceEEcCCCeEEEEEEEecCCCceEEE
Q psy7042 155 DVDNGDYTCEAYNSVGF--AHTSSRVKIGTP---------------PRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSL 217 (2245)
Q Consensus 155 ~~d~G~Y~C~a~n~~g~--~~~~~~l~V~~~---------------P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~i~W 217 (2245)
.+|+|.|+|.|.|..+. ....+.|.|..+ |.+...|..+.+.+|++++|.|.+.+.|.+.++|
T Consensus 90 ~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W 169 (247)
T 2ghw_B 90 AEDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERATLSCRASQSVRSNLAW 169 (247)
T ss_dssp GGGCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEECTTSCEEEEEEESSCCTTCEEE
T ss_pred HHHCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCCcEEEEEEeCCCccceEEE
Confidence 99999999999997322 223457888754 3455667788899999999999999999899999
Q ss_pred ee--Cceeee------------cCCceEEEEeCCeEEEEEcccCccCceeEEEEEEcCCcc-eEEEEEEEEe
Q psy7042 218 TK--NGRVVQ------------SDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGS-VSGTFTINIT 274 (2245)
Q Consensus 218 ~~--~g~~l~------------~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~V~ 274 (2245)
|| +|..+. ...++.+...+...+|.|.++..+|+|.|+|.|.|..+. ......|.|.
T Consensus 170 ~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~g~~t~l~V~ 241 (247)
T 2ghw_B 170 YQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQRSNWPPTFGQGTKVEVK 241 (247)
T ss_dssp EEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred EEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEEEEEEccCCCceEcCCEEEEEC
Confidence 99 665431 134555555556678999999999999999999986533 2345677776
No 208
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.75 E-value=7.5e-18 Score=192.44 Aligned_cols=184 Identities=13% Similarity=0.097 Sum_probs=135.7
Q ss_pred CCCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECCeeccCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEEcC
Q psy7042 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNS 168 (2245)
Q Consensus 89 ~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 168 (2245)
.+|.|...|.. .+.+|++|+|.|.+.+ +.+.+.|+|+|..+..... ..........|.|.+++.+|+|.|+|.+.|.
T Consensus 6 ~kP~i~~~P~~-~v~~G~~VtL~C~~~~-~~~~~~w~k~g~~~~~~~~-~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 82 (242)
T 1p6f_A 6 PKPFIWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRP-KPPERINKVKFYIPDMNSRMAGQYSCIYRVG 82 (242)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECC-SSCTTCCEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CCCEEEeeCCC-ccCCCCcEEEEEeeCC-CCcEEEEEECCCccccccc-cccCCcceeEEEecCCCcccCeEEEEEEecC
Confidence 68889888877 8999999999999875 4568999999987641100 0001123446999999999999999999886
Q ss_pred ccc--ceeEEEEEecC---CCeeecCCCceEEcCCCeEEEEEEEecCCCceEEEeeCceeeecCCceEEEEeCCeEEEEE
Q psy7042 169 VGF--AHTSSRVKIGT---PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFI 243 (2245)
Q Consensus 169 ~g~--~~~~~~l~V~~---~P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i 243 (2245)
.+. .+..+.|.|.. +|.+...|. ..+.+|++++|.|.+.+. .+.+.|+|+|..+.. ..........|.|
T Consensus 83 ~~~s~~S~~~~L~V~~~~~~P~i~~~p~-~~v~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~----~~~~~~~~~~l~I 156 (242)
T 1p6f_A 83 ELWSEPSNLLDLVVTEMYDTPTLSVHPG-PEVISGEKVTFYCRLDTA-TSMFLLLKEGRSSHV----QRGYGKVQAEFPL 156 (242)
T ss_dssp TEECCCCCCEEEEEECCSCCCEEEEESC-SEEETTCEEEEEEECTTS-CSEEEEEECSSSCEE----EEEECSSEEEEEE
T ss_pred CccccCCcceEEEeecccCCCceEccCC-CccCCCCcEEEEEecCCC-CCEEEEEECCCccCc----cccCCCceEEEEe
Confidence 543 23456777764 677776663 568999999999998765 469999999987754 1223345678999
Q ss_pred cccCccCceeEEEEEEcCC---cceEEEEEEEEecCCCCCC
Q psy7042 244 KEIRKEDAGDYTVNLSNSS---GSVSGTFTINITGLPGPPI 281 (2245)
Q Consensus 244 ~~~~~~d~G~Y~C~a~n~~---g~~~~~~~l~V~~~p~~~~ 281 (2245)
.+++.+|+|.|+|.|.|.. ...+..+.|.|.+++..|.
T Consensus 157 ~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~~~~~~P~ 197 (242)
T 1p6f_A 157 GPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVTGDIENTS 197 (242)
T ss_dssp EECCGGGCEEEEEEEEEETTEECCCCCCEEEEEEC------
T ss_pred CCCccccCEEEEEEEECCCCcccCCCCCEEEEEeccCCCCc
Confidence 9999999999999999864 3456788999998766554
No 209
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.75 E-value=1.5e-18 Score=190.65 Aligned_cols=144 Identities=15% Similarity=0.196 Sum_probs=111.9
Q ss_pred EEeCCCeEEEEEEEeeecCCceEEEECCeeccCCCeEEEEEcCcEEEEEEee-eccCCCeEEEEEEEcCcccceeEEEEE
Q psy7042 101 VVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNE-VTDVDNGDYTCEAYNSVGFAHTSSRVK 179 (2245)
Q Consensus 101 ~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~-~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 179 (2245)
.+.+|+.++|.|.+.+ |. .|.|+|||..+..+. ++ +|.|.+ ++.+|+|.|+|.|.|..|.......+.
T Consensus 10 v~~~G~~v~L~C~~~~-~~-~i~W~k~g~~l~~~~-------~~--~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~ 78 (186)
T 1jbj_A 10 VSISGTSVELTCPLDS-DE-NLKWEKNGQELPQKH-------DK--HLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKAR 78 (186)
T ss_dssp EEEETTEEEEECSSCC-CT-TCEEEETTEEECSCC-------CS--EEEEESCCTTTSCEEEEEECSSCCCCCCEEECCC
T ss_pred EEeCCcEEEEEEeCCC-CC-ceEEEECCEECCCCC-------CC--EEEECCCCccccCEEEEEEEEeCCCcEEEEEEEE
Confidence 4467999999999987 43 499999999987641 22 599999 999999999999999999866666665
Q ss_pred ecC--CCee----------------e--cCC--Cc---eEEcCCCeEEEEEEEecCCCceEEEeeCceeeecCCceEEEE
Q psy7042 180 IGT--PPRI----------------D--RMP--NA---LYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTV 234 (2245)
Q Consensus 180 V~~--~P~~----------------~--~~~--~~---~~v~~G~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~ 234 (2245)
|.. +|.. . ..+ .. ..+.+|+.+.|.|.+ |.|.|+|+|||..+.....
T Consensus 79 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~---p~p~i~W~k~g~~i~~~~~----- 150 (186)
T 1jbj_A 79 VGSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGL---TDKTIKWLKDGSIISPLNA----- 150 (186)
T ss_dssp CCSCCCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSS---SCSCEEEEETTEECCCSSC-----
T ss_pred EecccccccccccccccccCCccccccccccccccccceecCCCCeEEEEeeC---CCCeEEEEECCEECcccCC-----
Confidence 543 2221 0 000 01 234499999999998 8899999999999864432
Q ss_pred eCCeEEEEEcccCccCceeEEEEEEcCCcce
Q psy7042 235 LDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV 265 (2245)
Q Consensus 235 ~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 265 (2245)
....|.|.++..+|+|.|+|.|.|..|..
T Consensus 151 --~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 151 --TKNTWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp --CSSCCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred --CcceEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 23469999999999999999999998875
No 210
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.75 E-value=1.1e-17 Score=187.17 Aligned_cols=168 Identities=14% Similarity=0.068 Sum_probs=123.7
Q ss_pred CCCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECCeeccCCCeEE-EEEcCcEEEEEEeeeccCCCeEEEEEEEc
Q psy7042 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYR-VETAGGVFRLHFNEVTDVDNGDYTCEAYN 167 (2245)
Q Consensus 89 ~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~~~~~-~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 167 (2245)
.+|.|...|. ..+.+|++++|.|.+.+ |.+.+.|+|+|..+....+.. .........|.|.+++.+|+|.|+|.|.|
T Consensus 7 ~~P~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~~ 84 (201)
T 1nkr_A 7 RKPSLLAHPG-PLVKSEETVILQCWSDV-MFEHFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGSV 84 (201)
T ss_dssp CCCEEEEESC-SEEETTCCEEEEEEESS-CCSEEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEEEEB
T ss_pred CCCeEEEEcC-CccCCCCcEEEEEeccC-CCCEEEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEEeEec
Confidence 5788888776 77899999999999974 778999999998765321111 11112234699999999999999999987
Q ss_pred Ccc-----cceeEEEEEecC---CCeeecCCCceEEcCCCeEEEEEEEecCCCceEEEeeCceeeecCCceEEEEeC-Ce
Q psy7042 168 SVG-----FAHTSSRVKIGT---PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLD-DY 238 (2245)
Q Consensus 168 ~~g-----~~~~~~~l~V~~---~P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~-~~ 238 (2245)
... ..+..+.|.|.. +|.+...|. ..+.+|++++|.|.+.+ |.+.+.|+|+|..+...........+ ..
T Consensus 85 ~~~~~~~~~~s~~~~l~V~~~~~~p~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~ 162 (201)
T 1nkr_A 85 THSPYQVSAPSDPLDIVIIGLYEKPSLSAQPG-PTVLAGENVTLSCSSRS-SYDMYHLSREGEAHERRLPAGPKVNGTFQ 162 (201)
T ss_dssp TTBTTCCCCCCCCEEEEEECSSCCCEEEEESC-SEECTTCEEEEEEEESS-CCSEEEEEETTCSSCEEEECEEEETTEEE
T ss_pred CCCCccccCCCCCEEEEeeccCCCCceecCCC-CccCCCCeEEEEEeCCC-CCceEEEEECCcccCcccccccccCCceE
Confidence 531 233456777764 467766665 47899999999999886 56899999999877543221111111 25
Q ss_pred EEEEEcccCccCceeEEEEEEcCC
Q psy7042 239 IIIFIKEIRKEDAGDYTVNLSNSS 262 (2245)
Q Consensus 239 ~~L~i~~~~~~d~G~Y~C~a~n~~ 262 (2245)
..|.|.+++ |+|.|+|.|.+..
T Consensus 163 ~~L~i~~v~--d~G~Y~C~a~~~~ 184 (201)
T 1nkr_A 163 ADFPLGPAT--HGGTYRCFGSFHD 184 (201)
T ss_dssp EEEEEEECC--SCEEEEEEEEETT
T ss_pred EEEEeCCcC--CCeeEEEEEEcCC
Confidence 689999998 9999999999753
No 211
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=99.74 E-value=2.3e-17 Score=186.34 Aligned_cols=194 Identities=20% Similarity=0.230 Sum_probs=148.4
Q ss_pred cCCCCCcccEEeeeeCceEEEEecCCCCC---CCCccceEEEeeeecCCCceEEecceeeeceEEEecCCCCceeeEEEE
Q psy7042 900 DRPHPPENLHADEFAGDSLTLYWTPPRDN---GGSEITNYVVEKKDYNSTVWTKVSSYVTTPFVRVRNLAIGSTYEFRVM 976 (2245)
Q Consensus 900 ~~P~~p~~l~~~~~~~~~~~l~W~~p~~~---~g~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~ 976 (2245)
.+|.+|.++.+...+.+++.|+|++|..+ .+..+.+|.|+|+......+...........+.|.+|.|++.|.|+|+
T Consensus 3 ~P~~~P~~l~~~~~~~~si~l~W~~p~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~ 82 (211)
T 3p4l_A 3 LPMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANATTLSYLVTGLKPNTLYEFSVM 82 (211)
T ss_dssp CCCCCCEEEEEEECSSSCEEEEEECTTSCTTCCCCSSCEEEEEEEECC---CCCEEEEESSSEEEECSCCTTCEEEEEEE
T ss_pred CCCCCCCCEEEEecCCCeEEEEEeCCCCCcccccCCCcEEEEEEEECCCCcceEEEeCCCceEEEecCcCCCCEEEEEEE
Confidence 36789999999999999999999987533 134899999999976655444344456677999999999999999999
Q ss_pred EEeccccCCCccccCcccccCCCCCCC-CCCCCeeEee--cCCeEEEEecCCCCCCCCccceEEEEEEecCCccceeccc
Q psy7042 977 AENQYGLSKPALTIDPIKAKHPFDVPG-APGAPKGVDS--TEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASM 1053 (2245)
Q Consensus 977 a~n~~g~~~~s~~~~~~~~~t~~~~p~-~p~~~~~~~~--~~~~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~ 1053 (2245)
|.|..|.++++ ..+.+.+....|. +|.++++... +.+++.|+|++|...++ ++.+|.|+|+..+.........
T Consensus 83 A~n~~g~~~~S---~~~~~~t~~~~P~~~P~~~~~~~~~~s~~sv~l~W~~p~~~~g-~i~~Y~v~~~~~~~~~~~~~~~ 158 (211)
T 3p4l_A 83 VTKGRRSSTWS---MTAHGTTFELVPTSPPKDVTVVSKEGKPKTIIVNWQPPSEANG-KITGYIIYYSTDVNAEIHDWVI 158 (211)
T ss_dssp EEETTEECCCC---CCEEEECCCCCCCSCCEEEEEEEETTEEEEEEEEEECCTTCCS-CCCEEEEEEESCTTSCGGGSEE
T ss_pred EEcCCCCCccc---eeEeeecccCCCCCCCcceEEEecCCCCCEEEEEECCCCCCCC-CEEEEEEEEEECCCCCCCceEE
Confidence 99999988876 4677788888888 8889998877 47899999999886655 6999999998665432211111
Q ss_pred cccCCcceeEEEEeecccccCCccCchhhhhhhhhcccccccccccCCcEEEEEEEEEecCCCCCCCCCCccee
Q psy7042 1054 AHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSDIIM 1127 (2245)
Q Consensus 1054 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~v~A~n~~G~~~~s~~~~~~~ 1127 (2245)
..++.... .++|.+|.+++.|.|+|+|.|..|.|++|....+.+
T Consensus 159 ~~~~~~~~------------------------------~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~~ 202 (211)
T 3p4l_A 159 EPVVGNRL------------------------------THQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRT 202 (211)
T ss_dssp EEEESSCS------------------------------EEEECCCCTTCEEEEEEEEEETTEECCCCCCEEEEC
T ss_pred EEecCCee------------------------------EEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEccC
Confidence 11111111 126999999999999999999999999887654443
No 212
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=99.74 E-value=3.5e-17 Score=187.95 Aligned_cols=199 Identities=22% Similarity=0.258 Sum_probs=153.1
Q ss_pred cCCCCCcccEEeeeeCceEEEEecCCCCCCCCccceEEEeeeecCCCceEEecceeeeceEEEecCCCCceeeEEEEEEe
Q psy7042 900 DRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFVRVRNLAIGSTYEFRVMAEN 979 (2245)
Q Consensus 900 ~~P~~p~~l~~~~~~~~~~~l~W~~p~~~~g~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~n 979 (2245)
.+|.+|.++.+...+.+++.|+|++| +| .+.+|.|+|+......+.........+.+.|.+|.|++.|.|+|+|.|
T Consensus 4 ~p~~~P~~l~~~~~~~~si~l~W~~p---~g-~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n 79 (234)
T 3f7q_A 4 MDLGAPQNPNAKAAGSRKIHFNWLPP---SG-KPMGYRVKYWIQGDSESEAHLLDSKVPSVELTNLYPYCDYEMKVCAYG 79 (234)
T ss_dssp -CCCCCEEEEEEECSSSCEEEEEECC---SS-CCCEEEEEEEETTSCGGGCEEEEESSSEEEECSCCTTCEEEEEEEEEE
T ss_pred CCCCCCcceEEEEcCCCEEEEEEECC---CC-ccceEEEEEEECCCCccceEEEcCCccEEEECCCCCCCEEEEEEEEEe
Confidence 58899999999999999999999998 33 899999999876554433333345678899999999999999999999
Q ss_pred ccccCCCccccCcccccCCCCCCCCCCCCeeEeecCCeEEEEecCCCCCCCCccceEEEEEEecCCccceecc---cccc
Q psy7042 980 QYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKAS---MAHI 1056 (2245)
Q Consensus 980 ~~g~~~~s~~~~~~~~~t~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~---~~~~ 1056 (2245)
..|.++.+ ..+.+.+....|.+|.++++...+.+++.|+|.+|...++ +|.+|.|+|+..++..+.... ....
T Consensus 80 ~~G~g~~s---~~~~~~T~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~g-~i~~Y~v~~~~~~~~~~~~~~~~~~~~~ 155 (234)
T 3f7q_A 80 AQGEGPYS---SLVSCRTHQEVPSEPGRLAFNVVSSTVTQLSWAEPAETNG-EITAYEVCYGLVNDDNRPIGPMKKVLVD 155 (234)
T ss_dssp TTEECCCC---CCEEEECCCCCCCCCCCCEEEECSSSCEEEECCCCSCCSS-CCCEEEEEEEEBCTTSCBSSCCEECCCS
T ss_pred CCCcCCCC---CeEEEEcCCCCCCCCCccEEEEecCCEEEEEEcCCCCCCC-ceeEEEEEEEECCCCCCccCcceEEEec
Confidence 99988876 5667888889999999999999999999999999977654 699999999876654321100 0000
Q ss_pred CCcceeEEEEeecccccCCccCchhhhhhhhhcccccccccccCCcEEEEEEEEEecCCCCCCCCC-CcceeecCCCCCC
Q psy7042 1057 PDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSS-SDIIMCCAPPCAP 1135 (2245)
Q Consensus 1057 ~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~v~A~n~~G~~~~s~~-~~~~~~~~~p~~p 1135 (2245)
.... +.++|.+|.+++.|.|+|+|.|..|.|+++.. ..+.+...+|..|
T Consensus 156 ~~~~------------------------------~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~T~~~~P~~~ 205 (234)
T 3f7q_A 156 NPKN------------------------------RMLLIENLRESQPYRYTVKARNGAGWGPEREAIINLATQPKRPMSI 205 (234)
T ss_dssp CTTC------------------------------CEEEEECCCTTCCEEEEEEEEETTEECCCEEEEECGGGSCCCCCCC
T ss_pred CCcc------------------------------eEEEeCCCCCCCeEEEEEEEECCCccCCCcCceeEeecCCCCCCCC
Confidence 0000 11269999999999999999999999988763 4444544444444
Q ss_pred c
Q psy7042 1136 K 1136 (2245)
Q Consensus 1136 ~ 1136 (2245)
+
T Consensus 206 P 206 (234)
T 3f7q_A 206 P 206 (234)
T ss_dssp C
T ss_pred c
Confidence 3
No 213
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.74 E-value=1.5e-17 Score=189.05 Aligned_cols=189 Identities=22% Similarity=0.378 Sum_probs=146.3
Q ss_pred CCCceeccCCceEEcCCCeEEEEEEecCcCCCeEEEeeCCEeccCCc-----eEEEEecCcEE--EEEEeeeccCCCeEE
Q psy7042 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGA-----RYRVETAGGVF--RLHFNEVTDVDNGDY 1768 (2245)
Q Consensus 1696 ~~p~~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~~~~l~~~~-----~~~~~~~~~~~--~L~i~~v~~~d~G~Y 1768 (2245)
.+|.|...+.++.+.+|++++|.|.+.+.|.+.+.|++++..+.... .......+... .|.|.+++.+|+|.|
T Consensus 8 ~pp~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 87 (212)
T 2v9r_A 8 FPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVY 87 (212)
T ss_dssp EEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCEEE
T ss_pred CCcceecCCCceEEeCCCcEEEEEEcCCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCeEE
Confidence 47888888889999999999999999999999999999999875432 11222223221 245567899999999
Q ss_pred EEEEecCceee-EEEEEEEecC-CCccccCCCceEEcCCCeEEEEEEE-eccCCcEEEEEECCEEeecCCceEEEEcCCe
Q psy7042 1769 TCEAYNSVGFA-HTSSRVKIGT-PPRIDRMPNALYIPEGDNTKVKIFY-AGDQPMEVSLTKNGRVVQSDDRFKFTVLDDY 1845 (2245)
Q Consensus 1769 ~C~~~n~~g~~-~~~~~l~V~~-~p~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~ 1845 (2245)
+|.+.|..|.. .....|.|.. ++.+...+....+.+|+.+.|.|.+ .+.|.+.+.|+++|..+......... .+
T Consensus 88 ~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~~~~~~~-~~-- 164 (212)
T 2v9r_A 88 VCVARNYLGEAVSHDASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITI-RG-- 164 (212)
T ss_dssp EEEEEETTEEEECCCEEEEECEECSSCSBCCCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECTTSTTEEE-ET--
T ss_pred EEEEECCCCceeecceEEEEEeccccceeCCCceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCCcceEEc-cC--
Confidence 99999988865 3467777765 4556667777889999999999998 88999999999999998764432222 22
Q ss_pred EEEEEcccCcccceEEEEEEEcCCeeeEEE-EEEEEeCCCCCC
Q psy7042 1846 IIIFIKEIRKEDAGDYTVNLSNSSGSVSGT-FTINITGLPGPP 1887 (2245)
Q Consensus 1846 ~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~-~~l~v~~~p~~~ 1887 (2245)
..|.|.++..+|+|.|+|.|.|..|..... +.|.|...|...
T Consensus 165 ~~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~V~~~P~~~ 207 (212)
T 2v9r_A 165 GKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFV 207 (212)
T ss_dssp TEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC-----
T ss_pred CeEEEeeCCHhhCeeEEEEEecccCceecceEEEEEEeCchHh
Confidence 279999999999999999999999987654 899998776543
No 214
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Probab=99.74 E-value=5.3e-17 Score=182.36 Aligned_cols=185 Identities=21% Similarity=0.296 Sum_probs=144.5
Q ss_pred EecCCCCCcccEEeeeeCceEEEEecCCCCCCCCccceEEEeeeecC-CCceEEecce--eeeceEEEecCCCCceeeEE
Q psy7042 898 VLDRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYN-STVWTKVSSY--VTTPFVRVRNLAIGSTYEFR 974 (2245)
Q Consensus 898 ~~~~P~~p~~l~~~~~~~~~~~l~W~~p~~~~g~~i~~y~i~~~~~~-~~~~~~~~~~--~~~~~~~i~~L~p~~~y~~~ 974 (2245)
+.++|.+|.++.+.. +.+++.|+|++|.+. ++.+.+|.|+++... .+.|...... .....+.+ +|.|++.|.|+
T Consensus 2 v~~~P~~P~~~~~~~-~~~sv~l~W~~p~~~-~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~~-~L~p~t~Y~~~ 78 (205)
T 1cfb_A 2 VQDVPNAPKLTGITC-QADKAEIHWEQQGDN-RSPILHYTIQFNTSFTPASWDAAYEKVPNTDSSFVV-QMSPWANYTFR 78 (205)
T ss_dssp CCCCCCCCEEEEEEE-CSSEEEEEEECCCCT-TSCCCEEEEEEEESSSTTCCEEEEEEEETTCSEEEE-ECCSSEEEEEE
T ss_pred cccCCCCCCCcEEEe-cCCEEEEEEECcccC-CCceEEEEEEEecCCCCCCceeeeeccCCCceEEEE-eCCCCCEEEEE
Confidence 457999999999999 999999999999654 459999999998754 3667544322 34556777 99999999999
Q ss_pred EEEEeccccCCCccccCcccccCCCCCCC-CCCCCeeEeecCCeEEEEecCCC--CCCCCccceEEEEEEecCCcc-cee
Q psy7042 975 VMAENQYGLSKPALTIDPIKAKHPFDVPG-APGAPKGVDSTEDSISLVWSKPR--HDGGSPIQRYIVEKRLISDDK-WIK 1050 (2245)
Q Consensus 975 v~a~n~~g~~~~s~~~~~~~~~t~~~~p~-~p~~~~~~~~~~~~v~l~W~~p~--~~~~~~i~~y~v~~~~~~~~~-~~~ 1050 (2245)
|+|.|..|.|.++. ....+.+....|. +|.++++...+.+++.|+|++|. ..+ +++.+|.|+|+..+... |..
T Consensus 79 V~A~n~~G~~~~s~--~~~~~~T~~~~P~~~P~~~~~~~~~~~sv~l~W~~p~~~~~n-g~i~~Y~v~~~~~~~~~~~~~ 155 (205)
T 1cfb_A 79 VIAFNKIGASPPSA--HSDSCTTQPDVPFKNPDNVVGQGTEPNNLVISWTPMPEIEHN-APNFHYYVSWKRDIPAAAWEN 155 (205)
T ss_dssp EEEEETTEECCCCC--CCCCEEECCCCCSCCCSCCEEECSSTTCEEEECCCCCGGGTC-SSSCEEEEEEEESSTTCCCEE
T ss_pred EEEEECCccCCCCC--CceeEEcCCcCCCCCCeeeEeecCCCCeEEEEEECCCccccC-CCceEEEEEEEECCCCCCcEE
Confidence 99999999988773 2345666777775 88999999999999999999987 444 45999999999876543 544
Q ss_pred ccccccCCcceeEEEEeecccccCCccCchhhhhhhhhcccccccccccCCcEEEEEEEEEecCCCCCCC
Q psy7042 1051 ASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWS 1120 (2245)
Q Consensus 1051 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~v~A~n~~G~~~~s 1120 (2245)
..+.... .. .++|.+|.+++.|.|+|+|.|..|.|+++
T Consensus 156 ~~~~~~~--~~------------------------------~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s 193 (205)
T 1cfb_A 156 NNIFDWR--QN------------------------------NIVIADQPTFVKYLIKVVAINDRGESNVA 193 (205)
T ss_dssp EEECCTT--CC------------------------------EEEECSCCSSCEEEEEEEEEETTEECSSC
T ss_pred EEecCCC--cc------------------------------EEEEcCCCCCcEEEEEEEEEcCCCcCCCC
Confidence 3322111 11 12699999999999999999999999854
No 215
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.74 E-value=3.9e-17 Score=193.10 Aligned_cols=189 Identities=12% Similarity=0.168 Sum_probs=138.8
Q ss_pred CCCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECCe-----ecc---------CCCeEEEEEcCcEEEEEEeeec
Q psy7042 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGR-----EIS---------SGARYRVETAGGVFRLHFNEVT 154 (2245)
Q Consensus 89 ~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~-----~l~---------~~~~~~~~~~~~~~~L~i~~~~ 154 (2245)
..+.|+..|..+.+.+|++|+|.|.+.+.|.+.|.|+|++. .+. ...|+.+...++..+|.|.+++
T Consensus 11 ~~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 90 (276)
T 3auv_A 11 GDIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQ 90 (276)
T ss_dssp -CCCEEEECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred cceeEEeCCCeEEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCC
Confidence 35677788888999999999999999999999999998542 121 2457887777777889999999
Q ss_pred cCCCeEEEEEEEcCccc-ceeEEEEEecCCCe--------------eecCCCceEEcCCCeEEEEEEEecCC--CceEEE
Q psy7042 155 DVDNGDYTCEAYNSVGF-AHTSSRVKIGTPPR--------------IDRMPNALYIPEGDNTKVKIFYAGDQ--PMEVSL 217 (2245)
Q Consensus 155 ~~d~G~Y~C~a~n~~g~-~~~~~~l~V~~~P~--------------~~~~~~~~~v~~G~~~~l~C~~~g~p--~~~i~W 217 (2245)
.+|+|.|+|.|.|..+. ....+.|.|..+|. ....|....+.+|++++|.|.+.|.| .+.|.|
T Consensus 91 ~~DsG~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W 170 (276)
T 3auv_A 91 PEDFATYYCQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLSCAASGFTISDYWIHW 170 (276)
T ss_dssp GGGCEEEEEEECSSSSCCCCCCEEEEC-----------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEEEE
T ss_pred hhhCEEEEEEEecCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEecCCCeEEEEEEecCccCCCCEEEE
Confidence 99999999999998664 23346788876532 23445678899999999999999877 589999
Q ss_pred eeCc--eee---e--------------cCCceEEEEe--CCeEEEEEcccCccCceeEEEEEEcCC---cc--eEEEEEE
Q psy7042 218 TKNG--RVV---Q--------------SDDRFKFTVL--DDYIIIFIKEIRKEDAGDYTVNLSNSS---GS--VSGTFTI 271 (2245)
Q Consensus 218 ~~~g--~~l---~--------------~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~a~n~~---g~--~~~~~~l 271 (2245)
||++ ..+ . ...++.+... .....|.|.++..+|+|.|+|.|.|.. +. ......|
T Consensus 171 ~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~~~~~~~~fg~gt~l 250 (276)
T 3auv_A 171 VRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVFFLPYAMDYWGQGTLV 250 (276)
T ss_dssp EEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECSSTTCSCCCBCCCEEE
T ss_pred EEcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhHCEEEEEEEEcCcCCcCceEECCCEEE
Confidence 9963 221 0 1245555543 345689999999999999999999973 22 2234677
Q ss_pred EEecCC
Q psy7042 272 NITGLP 277 (2245)
Q Consensus 272 ~V~~~p 277 (2245)
.|...+
T Consensus 251 ~V~~~~ 256 (276)
T 3auv_A 251 TVSSAS 256 (276)
T ss_dssp EEC---
T ss_pred EEcccc
Confidence 776544
No 216
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.74 E-value=1.4e-17 Score=188.88 Aligned_cols=175 Identities=13% Similarity=0.174 Sum_probs=130.4
Q ss_pred eecCCcceEEeCCCeEEEEEEEeeec---CCceEEEECC--eec------------cCCCeEEEEEcCcEEEEEEeeecc
Q psy7042 93 FIVPLKDLVVPLGKLLTLQCEATGTP---VPKCRWLRNG--REI------------SSGARYRVETAGGVFRLHFNEVTD 155 (2245)
Q Consensus 93 ~~~~~~~~~v~~G~~v~L~C~~~g~p---~~~i~W~~~g--~~l------------~~~~~~~~~~~~~~~~L~i~~~~~ 155 (2245)
++. |..+.+.+|+.++|.|.+.+.| .+.|.|+|++ ..+ ....|+.+...++...|.|.+++.
T Consensus 4 v~~-p~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 82 (212)
T 1q0x_L 4 VTQ-ESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQT 82 (212)
T ss_dssp EEE-CSEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred EEC-CCeEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCc
Confidence 445 7788999999999999999877 4789999953 222 123577777777778899999999
Q ss_pred CCCeEEEEEEEcCcccce-eEEEEEec----CCCeeecCCCceEEcCCCeEEEEEEEecCC-Cc-eEEEeeCceeeecCC
Q psy7042 156 VDNGDYTCEAYNSVGFAH-TSSRVKIG----TPPRIDRMPNALYIPEGDNTKVKIFYAGDQ-PM-EVSLTKNGRVVQSDD 228 (2245)
Q Consensus 156 ~d~G~Y~C~a~n~~g~~~-~~~~l~V~----~~P~~~~~~~~~~v~~G~~~~l~C~~~g~p-~~-~i~W~~~g~~l~~~~ 228 (2245)
+|+|.|+|.|.|..+... ..+.|.|. .+|.+...+....+.+|+.++|.|.+.|.+ ++ .|+|+|||..+..+.
T Consensus 83 ~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~ 162 (212)
T 1q0x_L 83 EDEAIYFCALWSNNKLVFGGGTKLTVLGQPKSSPTVTLFPPSSEELSTAKATLVCTITDFYPGVVTVDWKVDGTPVTAGM 162 (212)
T ss_dssp GGCEEEEEEEECSSCEEECCCEEEEECCSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTE
T ss_pred cCCEEEEEEEecCchhhcCCCeEEEEecCCCCCCeeEEeCCCHHHccCCcEEEEEEEEEEeCCCeEEEEEECCEeCCCCe
Confidence 999999999999876432 34567773 467776655545556799999999998854 43 899999999986542
Q ss_pred ceE-EEEeC-----CeEEEEEcccCccCceeEEEEEEcCCcceEEE
Q psy7042 229 RFK-FTVLD-----DYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGT 268 (2245)
Q Consensus 229 ~~~-~~~~~-----~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 268 (2245)
... ....+ ....|.|..+..+|+|.|+|.|.|.......+
T Consensus 163 ~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~ 208 (212)
T 1q0x_L 163 ETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHSSNKT 208 (212)
T ss_dssp EECCCEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTEEEEEE
T ss_pred ecCCceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCcceeee
Confidence 110 11111 12468999999999999999999987654443
No 217
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.74 E-value=1.2e-17 Score=189.53 Aligned_cols=174 Identities=14% Similarity=0.235 Sum_probs=133.5
Q ss_pred CceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECC--eec------------cCCCeEEEEEcCcEEEEEEeeeccC
Q psy7042 91 PDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNG--REI------------SSGARYRVETAGGVFRLHFNEVTDV 156 (2245)
Q Consensus 91 P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g--~~l------------~~~~~~~~~~~~~~~~L~i~~~~~~ 156 (2245)
|.++..|..+.+.+|+.++|.|.+.+.|.+.|.|+|.+ ... ....|+.+...++..+|.|.+++.+
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 81 (213)
T 3r06_A 2 IQMTQSPSSLPASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLESE 81 (213)
T ss_dssp CCEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred CeeEeCCCEEEecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCcc
Confidence 56777788899999999999999999999999999832 111 1245788777777889999999999
Q ss_pred CCeEEEEEEEcCcccc-eeEEEEEe---cCCCeeecCCCceEEcCCCeEEEEEEEecCCC--ceEEEeeCceeeecCC--
Q psy7042 157 DNGDYTCEAYNSVGFA-HTSSRVKI---GTPPRIDRMPNALYIPEGDNTKVKIFYAGDQP--MEVSLTKNGRVVQSDD-- 228 (2245)
Q Consensus 157 d~G~Y~C~a~n~~g~~-~~~~~l~V---~~~P~~~~~~~~~~v~~G~~~~l~C~~~g~p~--~~i~W~~~g~~l~~~~-- 228 (2245)
|+|.|+|.|.|..+.. ...+.|.| ..+|.+...+....+..|+.++|.|.+.|.|+ +.|.|+|+|..+..+.
T Consensus 82 D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~ 161 (213)
T 3r06_A 82 DIGSYYCQQYYNYPWTFGPGTKLEIKRADAKPTVSIFPPSSEQLGTGSATLVCFVNNFYPKDINVKWKVDGSEKRDGVLQ 161 (213)
T ss_dssp GCSEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEE
T ss_pred cCEEEEEecccCCceEEcCCceEEEeccCCCceeeeeCCCceecCCCCcEEEEEEeeecCCceEEEEEECCcccCCceEe
Confidence 9999999999876533 33566888 56788877777666778999999999987554 4899999999986531
Q ss_pred ceEEEEeC-----CeEEEEEcccCccCceeEEEEEEcCCcc
Q psy7042 229 RFKFTVLD-----DYIIIFIKEIRKEDAGDYTVNLSNSSGS 264 (2245)
Q Consensus 229 ~~~~~~~~-----~~~~L~i~~~~~~d~G~Y~C~a~n~~g~ 264 (2245)
........ ....|.|.....+|+|.|+|.|.|....
T Consensus 162 ~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~v~n~~~~ 202 (213)
T 3r06_A 162 SVTDQDSKDSTYSLSSTLSLTKADYERHNLYTCEVTHKTST 202 (213)
T ss_dssp EECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCS
T ss_pred ccCceeCCCCcEEEEEEEEeCHHHhccCCeEEEEEEecccC
Confidence 10011101 1236888888889999999999998644
No 218
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.74 E-value=3.4e-17 Score=191.22 Aligned_cols=188 Identities=14% Similarity=0.174 Sum_probs=139.8
Q ss_pred eecCCcceEEeCCCeEEEEEEEeee--cCCceEEEE--CCeec-----------------cCCCeEEEEEc--CcEEEEE
Q psy7042 93 FIVPLKDLVVPLGKLLTLQCEATGT--PVPKCRWLR--NGREI-----------------SSGARYRVETA--GGVFRLH 149 (2245)
Q Consensus 93 ~~~~~~~~~v~~G~~v~L~C~~~g~--p~~~i~W~~--~g~~l-----------------~~~~~~~~~~~--~~~~~L~ 149 (2245)
++..|..+.+.+|++|+|.|.+.|. +.+.|.|+| .+..+ ...+|+.+..+ ++..+|.
T Consensus 4 ~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~ 83 (253)
T 3uzq_A 4 LLEQSGAELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLH 83 (253)
T ss_dssp CEEECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEE
T ss_pred eEecCCCeeecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEE
Confidence 4456677889999999999999884 377899998 22211 11246666653 3467899
Q ss_pred EeeeccCCCeEEEEEEEcCcccce-eEEEEEecC---------------CCeeecCCCceEEcCCCeEEEEEEEecCCCc
Q psy7042 150 FNEVTDVDNGDYTCEAYNSVGFAH-TSSRVKIGT---------------PPRIDRMPNALYIPEGDNTKVKIFYAGDQPM 213 (2245)
Q Consensus 150 i~~~~~~d~G~Y~C~a~n~~g~~~-~~~~l~V~~---------------~P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~ 213 (2245)
|.+++.+|+|.|.|.|.|..+... ..+.|.|.. +|.+...|....+.+|++++|.|.+.+.|.+
T Consensus 84 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~ 163 (253)
T 3uzq_A 84 LSSLTSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAVSLGQRATISCRASENVDR 163 (253)
T ss_dssp ECSCCGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEECTTSCEEEEEEESSCCEE
T ss_pred eCCCCcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEEeCCCCEEEEEEecCcccc
Confidence 999999999999999999665543 456688875 4677778888999999999999999998876
Q ss_pred ----eEEEeeC--ceeee------------cCCceEEEEeCCeEEEEEcccCccCceeEEEEEEcCCcce-EEEEEEEEe
Q psy7042 214 ----EVSLTKN--GRVVQ------------SDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV-SGTFTINIT 274 (2245)
Q Consensus 214 ----~i~W~~~--g~~l~------------~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~ 274 (2245)
.+.|||+ +..+. ...++.+...+....|.|.++..+|+|.|.|.|.|..+.. ..-..|.|.
T Consensus 164 ~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~fg~gt~l~v~ 243 (253)
T 3uzq_A 164 YGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYFCQRSNEVPWTFGGGTKLEIK 243 (253)
T ss_dssp TTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCCBCCCEEEEEC
T ss_pred CCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEEEEEEEccCCCcEECCCEEEEEc
Confidence 9999994 32221 1245555556667789999999999999999999975432 345678888
Q ss_pred cCCCCC
Q psy7042 275 GLPGPP 280 (2245)
Q Consensus 275 ~~p~~~ 280 (2245)
..+.++
T Consensus 244 ~~~~~~ 249 (253)
T 3uzq_A 244 RPLEHH 249 (253)
T ss_dssp CC----
T ss_pred CCCCCc
Confidence 766554
No 219
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.73 E-value=8.5e-18 Score=196.93 Aligned_cols=203 Identities=15% Similarity=0.187 Sum_probs=129.0
Q ss_pred cCCCCeEEEEEEEEcCCCcCCCCCcCcceEEeeecCCCCCceeccCCceEEcCCCeEEEEEEecCcC-----CCeEEEee
Q psy7042 1659 LVEGNDYEFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTP-----VPKCRWLR 1733 (2245)
Q Consensus 1659 ~~~~d~g~y~c~a~n~~g~~~~~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~G~~v~L~C~~~~~p-----~~~v~W~~ 1733 (2245)
++++|.|.|+|.|. |...... .+. ...++.+...+..+.+.+|++++|.|.+.+.| .+.+.|+|
T Consensus 11 v~~~dsg~Y~C~a~---g~~~~~~-----~~~---~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k 79 (254)
T 2c1o_A 11 VRPGTSVKLSCKAS---GYSFTNY-----WMN---WLRELVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLL 79 (254)
T ss_dssp --------------------------------------CCCEEEECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEE
T ss_pred ecCCccEEEEEcCc---hhhhhhh-----hhh---eeeceeEEeCCceEEecCCCcEEEEeeccCcccccCCCCceEEEE
Confidence 67899999999998 3222111 111 11266777778889999999999999999887 37899998
Q ss_pred CC--Eec------------cCCceEEEEecCcEEEEEEeeeccCCCeEEEEEEecCceeeEE-EEEEEecC---CCcccc
Q psy7042 1734 NG--REI------------SSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHT-SSRVKIGT---PPRIDR 1795 (2245)
Q Consensus 1734 ~~--~~l------------~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~~~-~~~l~V~~---~p~~~~ 1795 (2245)
++ ..+ ....|+.+...++..+|.|.+++.+|+|.|+|.+.|..+.... ...|.|.. +|.+..
T Consensus 80 ~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~ 159 (254)
T 2c1o_A 80 QRPGQSPKRLIYLVSKLDSGDPDRFTGSGSGTDFTLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKRADAAPTVSI 159 (254)
T ss_dssp ECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSSSCEEBCCEEEEECCCCBCCEEEE
T ss_pred eCCCCCceEEEEeccccCCCccceEEEecCCCEEEEEECcCCcccCEEEEEEEEcCcceEecCCEEEEECCCCCCCeeEe
Confidence 43 221 1235777776777888999999999999999999987653322 23566653 566654
Q ss_pred CCCceEEcCCCeEEEEEEEecc-CC-cEEEEEECCEEeecCCceEEE--EcCC-----eEEEEEcccCcccceEEEEEEE
Q psy7042 1796 MPNALYIPEGDNTKVKIFYAGD-QP-MEVSLTKNGRVVQSDDRFKFT--VLDD-----YIIIFIKEIRKEDAGDYTVNLS 1866 (2245)
Q Consensus 1796 ~~~~~~~~~g~~~~l~C~~~~~-p~-~~v~W~~~g~~l~~~~~~~~~--~~~~-----~~~l~i~~~~~~d~G~Y~C~a~ 1866 (2245)
.+.......|+.++|.|.+.|. |+ +.++|+|+|+.+......... ...+ ...|.|.++..+|+|.|+|.|.
T Consensus 160 ~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~ 239 (254)
T 2c1o_A 160 FPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEAT 239 (254)
T ss_dssp ECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEESSSEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred ecCChhhccCCcEEEEEEEecccCCCcEEEEEECCCcccCcceeccccccCCCCcEEEEEEEEeccccccCCCeEEEEEE
Confidence 3333333468899999999984 44 479999999988654111110 0111 3579999999999999999999
Q ss_pred cCCeee
Q psy7042 1867 NSSGSV 1872 (2245)
Q Consensus 1867 n~~g~~ 1872 (2245)
|.....
T Consensus 240 n~~~~~ 245 (254)
T 2c1o_A 240 HKTSTS 245 (254)
T ss_dssp CTTCSS
T ss_pred cCCCCC
Confidence 987654
No 220
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.73 E-value=1.2e-16 Score=176.46 Aligned_cols=165 Identities=20% Similarity=0.356 Sum_probs=137.1
Q ss_pred eEEcCCCeEEEEEEecCcCCC--eEEEeeCCEeccCCceEEEEecCcEEEEEEeeeccCCCeEEEEEEecCceeeEEEEE
Q psy7042 1707 LVVPLGKLLTLQCEATGTPVP--KCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSR 1784 (2245)
Q Consensus 1707 ~~~~~G~~v~L~C~~~~~p~~--~v~W~~~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~ 1784 (2245)
..+.+|++++|.|.+.+.|.+ .+.|+|++..+...... .....|.|. +.+|+|.|+|.+.|. ....+.
T Consensus 8 ~~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~~-----~~~~~l~i~--~~~d~G~Y~C~~~n~---~~~~~~ 77 (184)
T 3b5h_A 8 TVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALP-----GQKTEFKVD--SDDQWGEYSCVFLPE---PMGTAN 77 (184)
T ss_dssp EEEEETTEEEEEEEEESCSSCCCEEEEESSSEEEECTTCC-----CSEEEEEEC--GGGCCEEEEEEEEST---TSCEEE
T ss_pred EEEecCCCEEEEEECCCCCCCceEEEEEeCCEEeeccccc-----CCcEEEEEe--chhhCeEEEEEEECC---cCcEEE
Confidence 567899999999999887777 89999999988655421 223446666 689999999999983 236778
Q ss_pred EEecCCCccccCCCceEEcCCCeEEEEEEEeccC-CcEEEEEE---CCEE-eec--CCceEEEEcCCeEEEEEcccC-cc
Q psy7042 1785 VKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQ-PMEVSLTK---NGRV-VQS--DDRFKFTVLDDYIIIFIKEIR-KE 1856 (2245)
Q Consensus 1785 l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p-~~~v~W~~---~g~~-l~~--~~~~~~~~~~~~~~l~i~~~~-~~ 1856 (2245)
|.|..+|.+...+....+.+|+.+.|.|.+.|.| .+.+.|++ ++.. +.. ..++.+...+....|.|.++. .+
T Consensus 78 l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~ 157 (184)
T 3b5h_A 78 IQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEA 157 (184)
T ss_dssp EEECCSCCCEESCSEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEETTEEEEEECSCCTTT
T ss_pred EEEecCCceeecCCCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecCCeeEEEEeeccccc
Confidence 9999999998888888899999999999999999 79999999 5544 432 256666666777899999999 99
Q ss_pred cceEEEEEEEcCCeeeEEEEEEEEe
Q psy7042 1857 DAGDYTVNLSNSSGSVSGTFTINIT 1881 (2245)
Q Consensus 1857 d~G~Y~C~a~n~~g~~~~~~~l~v~ 1881 (2245)
|+|.|+|.|.|..|.....+.|.|.
T Consensus 158 d~G~Y~C~a~N~~g~~~~~~~l~V~ 182 (184)
T 3b5h_A 158 DPGQYRCNGTSSKGSDQAIITLRVR 182 (184)
T ss_dssp SSEEEEEEEEETTEEEEEEEEEEEC
T ss_pred cCceEEEEEEeCCCcceEEEEEEEe
Confidence 9999999999999999999888885
No 221
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.73 E-value=6.5e-17 Score=188.84 Aligned_cols=171 Identities=15% Similarity=0.229 Sum_probs=131.7
Q ss_pred CCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECC-----ee---------ccCCCeEEEEEcCcEEEEEEeeecc
Q psy7042 90 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNG-----RE---------ISSGARYRVETAGGVFRLHFNEVTD 155 (2245)
Q Consensus 90 ~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g-----~~---------l~~~~~~~~~~~~~~~~L~i~~~~~ 155 (2245)
.+.++..|..+.+.+|+.|+|.|.+.+.|.+.|.|+|++ .. .....|+.+...++..+|.|.+++.
T Consensus 4 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 83 (250)
T 3esu_F 4 DIVLIQSTSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQ 83 (250)
T ss_dssp CCCEECSCSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred ceeEEecCCEEEeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCCh
Confidence 456777888899999999999999999999999999943 11 1124578777777888999999999
Q ss_pred CCCeEEEEEEEcCcccce-eEEEEEecCC-------------------CeeecCCCceEEcCCCeEEEEEEEecCC--Cc
Q psy7042 156 VDNGDYTCEAYNSVGFAH-TSSRVKIGTP-------------------PRIDRMPNALYIPEGDNTKVKIFYAGDQ--PM 213 (2245)
Q Consensus 156 ~d~G~Y~C~a~n~~g~~~-~~~~l~V~~~-------------------P~~~~~~~~~~v~~G~~~~l~C~~~g~p--~~ 213 (2245)
+|+|.|.|.|.|..+... ....|.|..+ |.+...+....+.+|+.++|.|.+.+.| .+
T Consensus 84 ~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~ 163 (250)
T 3esu_F 84 EDIGTYFCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPELVKPGASVKISCKDSGYAFSSS 163 (250)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEEC------------------------CEECCCEEECTTCCEEEEEECCSTTGGGS
T ss_pred hhCEEEEEEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCceEEcCCceEEEEEEecCCcccCC
Confidence 999999999998766533 3456788764 2344556678899999999999999877 78
Q ss_pred eEEEeeC--ceeee-----------------cCCceEEEEe--CCeEEEEEcccCccCceeEEEEEEc
Q psy7042 214 EVSLTKN--GRVVQ-----------------SDDRFKFTVL--DDYIIIFIKEIRKEDAGDYTVNLSN 260 (2245)
Q Consensus 214 ~i~W~~~--g~~l~-----------------~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~a~n 260 (2245)
.+.|||+ +..+. ...++.+... ....+|.|.++..+|+|.|+|.|.|
T Consensus 164 ~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 164 WMNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAVYFCARSG 231 (250)
T ss_dssp EEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred EEEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCcccCEEEEEEEec
Confidence 9999997 44331 1245555433 4556899999999999999999997
No 222
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=99.73 E-value=1.3e-16 Score=178.49 Aligned_cols=190 Identities=36% Similarity=0.647 Sum_probs=158.5
Q ss_pred eeCCCCCCCCCeeeeecCCcEEEEeeCCCCCCCcccccEEEEeeeCCCCCeEEEc-eeeeeeEEEecCCCCCEEEEEEEE
Q psy7042 666 ISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVG-NTRFTTMAITGLSPGHQYEFRVYA 744 (2245)
Q Consensus 666 v~~~P~~p~~~~~~~~~~~si~lsW~~p~~~~~~~~~~y~v~~~~~~~~~w~~~~-~~~~~~~~i~~L~p~t~y~~~v~a 744 (2245)
+.++|.+|.++.+..++.+++.|+|.+|..+++..+..|.|+++......|.... ......+.+.+|.|++.|.|+|.|
T Consensus 2 ~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a 81 (197)
T 3lpw_A 2 AMDTPGPPQDLKVKEVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVATNCHKTSWKVDQLQEGCSYYFRVLA 81 (197)
T ss_dssp CCCSCCCCEEEEEEEECSSCEEEEEECCSCCTTSCCCEEEEEEEETTCSSCEEEEEEECSSEEEECCCCTTCEEEEEEEE
T ss_pred CCCCCCCCCCcEEEEecCCEEEEEEcCCccCCCCcccEEEEEEEECCCCccEEeecCCCccEEEEcCCCCCCEEEEEEEE
Confidence 3578999999999999999999999988777777899999999998878887664 345678999999999999999999
Q ss_pred EecccCCCCCCCCccEEecCccccccccccccccCCCceeecccccccccCCceEEEEeeeccCccccccccceeccccc
Q psy7042 745 ENVYGRSDPSTTSDLITTKDTFKKQIKKRQYDFDETGKKIRGKADEKVSDYDQYVFDIYSKYVPQPVDIKTSSVYDHYDI 824 (2245)
Q Consensus 745 ~n~~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 824 (2245)
.|..|.+.++......+
T Consensus 82 ~~~~g~~~~s~~~~~~t--------------------------------------------------------------- 98 (197)
T 3lpw_A 82 ENEYGIGLPAETAESVK--------------------------------------------------------------- 98 (197)
T ss_dssp EETTEECCCEECSSCEE---------------------------------------------------------------
T ss_pred EcCccccCCCCCcccee---------------------------------------------------------------
Confidence 99999876654322211
Q ss_pred ccccccCceeEEEEeeecccCCeeEEEeeccCCchhhhhhheeeeeeeccCCCceEeecccccCCcceEEEEEEecCCCC
Q psy7042 825 LEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFEVLDRPHP 904 (2245)
Q Consensus 825 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ 904 (2245)
...+|.+
T Consensus 99 -------------------------------------------------------------------------~~~~p~~ 105 (197)
T 3lpw_A 99 -------------------------------------------------------------------------ASERPLP 105 (197)
T ss_dssp -------------------------------------------------------------------------SCCCCCC
T ss_pred -------------------------------------------------------------------------cCCCCCC
Confidence 1246789
Q ss_pred CcccEEeeeeCceEEEEecCCCCCCCCccceEEEeeeecCCCceEEecceeeeceEEEecCCCCceeeEEEEEEeccccC
Q psy7042 905 PENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFVRVRNLAIGSTYEFRVMAENQYGLS 984 (2245)
Q Consensus 905 p~~l~~~~~~~~~~~l~W~~p~~~~g~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~~ 984 (2245)
|.++.+...+.+++.|+|.+|...+|+.+.+|.|++...+...|..+.. ...+.+.+.+|.|++.|.|+|+|.|..|.|
T Consensus 106 p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~-~~~~~~~~~~L~p~t~Y~~~V~A~n~~G~s 184 (197)
T 3lpw_A 106 PGKITLMDVTRNSVSLSWEKPEHDGGSRILGYIVEMQTKGSDKWATCAT-VKVTEATITGLIQGEEYSFRVSAQNEKGIS 184 (197)
T ss_dssp CSCEEEEEECSSCEEEEECCCSCCTTSCCCEEEEEEEETTCSCCEEEEE-ESSSEEEECCCCTTCEEEEEEEEEETTEEC
T ss_pred CcccEEEeccCCeEEEEecCCCcCCCCcccEEEEEEEeCCCCceEEeec-ccccEEEeCCcCCCCEEEEEEEEEeCCccC
Confidence 9999999889999999999998777778999999999877777766543 456789999999999999999999999999
Q ss_pred CCccccCc
Q psy7042 985 KPALTIDP 992 (2245)
Q Consensus 985 ~~s~~~~~ 992 (2245)
+++..+..
T Consensus 185 ~~S~~s~~ 192 (197)
T 3lpw_A 185 DPRQLSVP 192 (197)
T ss_dssp CCEECSSC
T ss_pred CCccCccc
Confidence 88755543
No 223
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Probab=99.73 E-value=1e-16 Score=179.99 Aligned_cols=194 Identities=23% Similarity=0.319 Sum_probs=149.7
Q ss_pred eeCCCCCCCCCeeeeecCCcEEEEeeCCCCCCCcccccEEEEeeeCC-CCCeEEEce---eeeeeEEEecCCCCCEEEEE
Q psy7042 666 ISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHP-MSSWIRVGN---TRFTTMAITGLSPGHQYEFR 741 (2245)
Q Consensus 666 v~~~P~~p~~~~~~~~~~~si~lsW~~p~~~~~~~~~~y~v~~~~~~-~~~w~~~~~---~~~~~~~i~~L~p~t~y~~~ 741 (2245)
|.++|.+|.++.+.. +.+++.|+|.+| .++++.+.+|.|+|+... ...|..... .....+.+ +|.|++.|.|+
T Consensus 2 v~~~P~~P~~~~~~~-~~~sv~l~W~~p-~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~~-~L~p~t~Y~~~ 78 (205)
T 1cfb_A 2 VQDVPNAPKLTGITC-QADKAEIHWEQQ-GDNRSPILHYTIQFNTSFTPASWDAAYEKVPNTDSSFVV-QMSPWANYTFR 78 (205)
T ss_dssp CCCCCCCCEEEEEEE-CSSEEEEEEECC-CCTTSCCCEEEEEEEESSSTTCCEEEEEEEETTCSEEEE-ECCSSEEEEEE
T ss_pred cccCCCCCCCcEEEe-cCCEEEEEEECc-ccCCCceEEEEEEEecCCCCCCceeeeeccCCCceEEEE-eCCCCCEEEEE
Confidence 568999999999999 999999999977 567789999999998754 366754321 22345666 99999999999
Q ss_pred EEEEecccCCCCCCCCccEEecCccccccccccccccCCCceeecccccccccCCceEEEEeeeccCccccccccceecc
Q psy7042 742 VYAENVYGRSDPSTTSDLITTKDTFKKQIKKRQYDFDETGKKIRGKADEKVSDYDQYVFDIYSKYVPQPVDIKTSSVYDH 821 (2245)
Q Consensus 742 v~a~n~~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 821 (2245)
|.|.|..|.+.++.....+++.+.
T Consensus 79 V~A~n~~G~~~~s~~~~~~~T~~~-------------------------------------------------------- 102 (205)
T 1cfb_A 79 VIAFNKIGASPPSAHSDSCTTQPD-------------------------------------------------------- 102 (205)
T ss_dssp EEEEETTEECCCCCCCCCEEECCC--------------------------------------------------------
T ss_pred EEEEECCccCCCCCCceeEEcCCc--------------------------------------------------------
Confidence 999999999888743222222211
Q ss_pred cccccccccCceeEEEEeeecccCCeeEEEeeccCCchhhhhhheeeeeeeccCCCceEeecccccCCcceEEEEEEecC
Q psy7042 822 YDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFEVLDR 901 (2245)
Q Consensus 822 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 901 (2245)
.+
T Consensus 103 ------------------------------------------------------------------------------~P 104 (205)
T 1cfb_A 103 ------------------------------------------------------------------------------VP 104 (205)
T ss_dssp ------------------------------------------------------------------------------CC
T ss_pred ------------------------------------------------------------------------------CC
Confidence 23
Q ss_pred CCCCcccEEeeeeCceEEEEecCCC--CCCCCccceEEEeeeecCCCc-eEEeccee-eeceEEEecCCCCceeeEEEEE
Q psy7042 902 PHPPENLHADEFAGDSLTLYWTPPR--DNGGSEITNYVVEKKDYNSTV-WTKVSSYV-TTPFVRVRNLAIGSTYEFRVMA 977 (2245)
Q Consensus 902 P~~p~~l~~~~~~~~~~~l~W~~p~--~~~g~~i~~y~i~~~~~~~~~-~~~~~~~~-~~~~~~i~~L~p~~~y~~~v~a 977 (2245)
+.+|.++.+...+.+++.|+|++|. +.+| .+.+|.|+|+...... |..+.... ....+.|.+|.+++.|.|+|+|
T Consensus 105 ~~~P~~~~~~~~~~~sv~l~W~~p~~~~~ng-~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A 183 (205)
T 1cfb_A 105 FKNPDNVVGQGTEPNNLVISWTPMPEIEHNA-PNFHYYVSWKRDIPAAAWENNNIFDWRQNNIVIADQPTFVKYLIKVVA 183 (205)
T ss_dssp SCCCSCCEEECSSTTCEEEECCCCCGGGTCS-SSCEEEEEEEESSTTCCCEEEEECCTTCCEEEECSCCSSCEEEEEEEE
T ss_pred CCCCeeeEeecCCCCeEEEEEECCCccccCC-CceEEEEEEEECCCCCCcEEEEecCCCccEEEEcCCCCCcEEEEEEEE
Confidence 4688899999888999999999987 5565 8999999999866554 76655443 5689999999999999999999
Q ss_pred EeccccCCCccccCcccccCCC
Q psy7042 978 ENQYGLSKPALTIDPIKAKHPF 999 (2245)
Q Consensus 978 ~n~~g~~~~s~~~~~~~~~t~~ 999 (2245)
.|..|.|+.+. ..+.+.+.+
T Consensus 184 ~n~~G~g~~ss--~~v~~~T~e 203 (205)
T 1cfb_A 184 INDRGESNVAA--EEVVGYSGE 203 (205)
T ss_dssp EETTEECSSCC--CCEEEESSS
T ss_pred EcCCCcCCCCC--CcEEEecCC
Confidence 99999998531 344444443
No 224
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.73 E-value=8.6e-18 Score=194.12 Aligned_cols=176 Identities=18% Similarity=0.276 Sum_probs=134.0
Q ss_pred cCCcceEEeCCCeEEEEEEEeeecC-CceEEEECCeecc---------C----CCeEE----------EEEcCcEEEEEE
Q psy7042 95 VPLKDLVVPLGKLLTLQCEATGTPV-PKCRWLRNGREIS---------S----GARYR----------VETAGGVFRLHF 150 (2245)
Q Consensus 95 ~~~~~~~v~~G~~v~L~C~~~g~p~-~~i~W~~~g~~l~---------~----~~~~~----------~~~~~~~~~L~i 150 (2245)
..|..+.+.+|+.++|.|.+.+.|. +.|.|+|++.... . ..++. +..++ .|.|
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~---~L~i 81 (231)
T 2pet_A 5 SVPPLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQG---RLVL 81 (231)
T ss_dssp CCCSEEEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTC---CEEE
T ss_pred cCCCcEEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCc---eEEE
Confidence 3567788999999999999999885 8999998654321 1 11222 32223 2999
Q ss_pred eeeccCCCeEEEEEEEcCc-ccceeEEEEEecCCC---eeecCCCceEEcCCCeE-EEEEEE-ecCCCceEEEeeCceee
Q psy7042 151 NEVTDVDNGDYTCEAYNSV-GFAHTSSRVKIGTPP---RIDRMPNALYIPEGDNT-KVKIFY-AGDQPMEVSLTKNGRVV 224 (2245)
Q Consensus 151 ~~~~~~d~G~Y~C~a~n~~-g~~~~~~~l~V~~~P---~~~~~~~~~~v~~G~~~-~l~C~~-~g~p~~~i~W~~~g~~l 224 (2245)
.+++.+|+|.|+|.|.|.. +..+..+.|.|..+| .+...+....+.+|+.+ +|.|.+ .|.|.|.|.|+|+|..+
T Consensus 82 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~~~~~~ 161 (231)
T 2pet_A 82 AEAQVGDERDYVCVVRAGAAGTAEATARLNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYRNGQRL 161 (231)
T ss_dssp SSCCGGGCEEEEEEEECGGGCEEEEEEEEEEEBCCCCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSCCEEEEEETTEEC
T ss_pred cccCcccCceEEEEEEecCCCceEEEEEEEEEecCCCcEEecCCcceeecCCCceEEEEEEeECcccCCEEEEEECCccC
Confidence 9999999999999999987 777788899998774 55666777778899998 999999 89999999999999998
Q ss_pred ecCC----ceEEEEeC----C-----eEEEEEcccCccCceeEEEEEEc-----CCcc-eEEEEEEEE
Q psy7042 225 QSDD----RFKFTVLD----D-----YIIIFIKEIRKEDAGDYTVNLSN-----SSGS-VSGTFTINI 273 (2245)
Q Consensus 225 ~~~~----~~~~~~~~----~-----~~~L~i~~~~~~d~G~Y~C~a~n-----~~g~-~~~~~~l~V 273 (2245)
.... ++.+.... + .+.|.|.....+|+|.|+|.|.| ..|. .+..+.|+|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~~~~~~~~~~~s~~~~l~V 229 (231)
T 2pet_A 162 EVPVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYSLPEGRHGRLDSPTFHLTL 229 (231)
T ss_dssp CCCSSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEECGGGCEEEEECCCEECCC
T ss_pred ccccccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcCCcccccccccccceEEEE
Confidence 7665 44433211 1 15688887677779999999999 4555 555565555
No 225
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.73 E-value=7.1e-17 Score=188.87 Aligned_cols=176 Identities=15% Similarity=0.244 Sum_probs=135.7
Q ss_pred CCCCceecCCcceEEeCCCeEEEEEEEee--ecCCceEEEEC--Ceecc-----------------CCCeEEEEE--cCc
Q psy7042 88 GEKPDFIVPLKDLVVPLGKLLTLQCEATG--TPVPKCRWLRN--GREIS-----------------SGARYRVET--AGG 144 (2245)
Q Consensus 88 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~g--~p~~~i~W~~~--g~~l~-----------------~~~~~~~~~--~~~ 144 (2245)
+.+|.+...+..+.+.+|++|+|.|.+.+ .|.+.+.|+|. +..+. ..+|+.+.. .++
T Consensus 4 ~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~ 83 (256)
T 3juy_B 4 HHHQVQLVQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSAN 83 (256)
T ss_dssp ---CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTT
T ss_pred ccceEEEEecCCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCC
Confidence 35778888999999999999999999987 36788999983 22110 124777763 355
Q ss_pred EEEEEEeeeccCCCeEEEEEEEcC------------cccceeEEEEEecC---------------CCeeecCCCceEEcC
Q psy7042 145 VFRLHFNEVTDVDNGDYTCEAYNS------------VGFAHTSSRVKIGT---------------PPRIDRMPNALYIPE 197 (2245)
Q Consensus 145 ~~~L~i~~~~~~d~G~Y~C~a~n~------------~g~~~~~~~l~V~~---------------~P~~~~~~~~~~v~~ 197 (2245)
..+|.|.+++.+|+|.|.|.|.|. .+.....+.|.|.. +|.+...|....+.+
T Consensus 84 ~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 163 (256)
T 3juy_B 84 TAYMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAPGTLSLSP 163 (256)
T ss_dssp EEEEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEECSEEEECT
T ss_pred EEEEEECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecCCeEEEeC
Confidence 678999999999999999999986 23334456788877 455677788899999
Q ss_pred CCeEEEEEEEecCCC-ceEEEeeC--ceeee------------cCCceEEEEeCCeEEEEEcccCccCceeEEEEEEcCC
Q psy7042 198 GDNTKVKIFYAGDQP-MEVSLTKN--GRVVQ------------SDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSS 262 (2245)
Q Consensus 198 G~~~~l~C~~~g~p~-~~i~W~~~--g~~l~------------~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~ 262 (2245)
|++++|.|.+.+.|. +.+.|||. +..+. ...++.+...+...+|.|.++..+|+|.|.|.|.|..
T Consensus 164 G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 243 (256)
T 3juy_B 164 GERATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFALYYCQVYGAS 243 (256)
T ss_dssp TSCEEEEEEESSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECCSS
T ss_pred CCCEEEEEEECCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCHhHCEEEEEEEeeCC
Confidence 999999999998876 89999982 33222 2345666666677789999999999999999999864
Q ss_pred c
Q psy7042 263 G 263 (2245)
Q Consensus 263 g 263 (2245)
+
T Consensus 244 ~ 244 (256)
T 3juy_B 244 S 244 (256)
T ss_dssp C
T ss_pred C
Confidence 3
No 226
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.73 E-value=3.1e-18 Score=194.25 Aligned_cols=172 Identities=12% Similarity=0.201 Sum_probs=129.3
Q ss_pred eecCCcceEEeCCCeEEEEEEEeeecCCceEEEEC--Ceecc------------CCCeEEEEEcCcEEEEEEeeeccCCC
Q psy7042 93 FIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRN--GREIS------------SGARYRVETAGGVFRLHFNEVTDVDN 158 (2245)
Q Consensus 93 ~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~--g~~l~------------~~~~~~~~~~~~~~~L~i~~~~~~d~ 158 (2245)
++. |..+.+.+|+.++|.|.+.+.|.+.|.|+|+ |..+. ...|+.+...++...|.|.+++.+|+
T Consensus 3 v~q-p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 81 (212)
T 1nfd_E 3 LIQ-PSSASVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDE 81 (212)
T ss_dssp EEC-CSEEEEETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGC
T ss_pred eEC-CCeEEEeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccC
Confidence 444 7778999999999999998888889999984 33321 14578877777778899999999999
Q ss_pred eEEEEEEEcCcc-c--ceeEEEEEe----cCCCeeecCCCceEEcCCCeEEEEEEEecC-CC-ceEEEeeCceeeecCCc
Q psy7042 159 GDYTCEAYNSVG-F--AHTSSRVKI----GTPPRIDRMPNALYIPEGDNTKVKIFYAGD-QP-MEVSLTKNGRVVQSDDR 229 (2245)
Q Consensus 159 G~Y~C~a~n~~g-~--~~~~~~l~V----~~~P~~~~~~~~~~v~~G~~~~l~C~~~g~-p~-~~i~W~~~g~~l~~~~~ 229 (2245)
|.|+|.|.|..+ . ....+.|.| ..+|.+...+....+.+|+.++|.|.+.|. |+ +.|+|+|+|..+.....
T Consensus 82 G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~ 161 (212)
T 1nfd_E 82 AAYYCLSSYGDNNDLVFGSGTQLTVLRGPKSSPKVTVFPPSPEELRTNKATLVCLVNDFYPGSATVTWKANGATINDGVK 161 (212)
T ss_dssp SEEEEEEEETTTTEEEECCCEEEEEECCCCBCCEEECCCCCHHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEECSSCB
T ss_pred EEEEEEEEcccCcccccCCceEEEEccCCCCCCEEEeeCCchHhccCCceEEEEEEEeeECCccEEEEEECCeEcCCCee
Confidence 999999997322 1 122355666 356777776655556789999999999886 54 79999999999875432
Q ss_pred eE-EEEeC----CeEEEEEcccCccCceeEEEEEEcCCcce
Q psy7042 230 FK-FTVLD----DYIIIFIKEIRKEDAGDYTVNLSNSSGSV 265 (2245)
Q Consensus 230 ~~-~~~~~----~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 265 (2245)
.. ....+ ..+.|.|.++..+|+|.|+|.|.|..+..
T Consensus 162 ~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 202 (212)
T 1nfd_E 162 TTKPSKQGQNYMTSSYLSLTADQWKSHNRVSCQVTHEGETV 202 (212)
T ss_dssp CCCCBCSSSCEEEEEBCCEEHHHHHTCSCEEEEEECTTTTC
T ss_pred cCCceecCCCceEEEEEEEchhhcCCCCeEEEEEEeCCceE
Confidence 11 00001 12458999999999999999999987653
No 227
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.73 E-value=5.5e-17 Score=188.17 Aligned_cols=170 Identities=16% Similarity=0.183 Sum_probs=132.0
Q ss_pred ceecCCcceEEeCCCeEEEEEEEeeec----CCceEEEECC--eecc------------CCCeEEEEEcCcEEEEEEeee
Q psy7042 92 DFIVPLKDLVVPLGKLLTLQCEATGTP----VPKCRWLRNG--REIS------------SGARYRVETAGGVFRLHFNEV 153 (2245)
Q Consensus 92 ~~~~~~~~~~v~~G~~v~L~C~~~g~p----~~~i~W~~~g--~~l~------------~~~~~~~~~~~~~~~L~i~~~ 153 (2245)
.++..|..+.+.+|++|+|.|.+.+.| .+.|.|+|++ ..+. ...|+.+...++..+|.|.++
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 82 (240)
T 1moe_A 3 VLTQSPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPV 82 (240)
T ss_dssp CEEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSC
T ss_pred ceEeeCCeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCC
Confidence 456677888999999999999999888 7899999952 2111 235788877777888999999
Q ss_pred ccCCCeEEEEEEEcCccc-ceeEEEEEecCCC------eeecCCCceEEcCCCeEEEEEEEecCC--CceEEEeeC--ce
Q psy7042 154 TDVDNGDYTCEAYNSVGF-AHTSSRVKIGTPP------RIDRMPNALYIPEGDNTKVKIFYAGDQ--PMEVSLTKN--GR 222 (2245)
Q Consensus 154 ~~~d~G~Y~C~a~n~~g~-~~~~~~l~V~~~P------~~~~~~~~~~v~~G~~~~l~C~~~g~p--~~~i~W~~~--g~ 222 (2245)
+.+|+|.|+|.|.|..+. ....+.|.|..++ .+...+....+.+|+.++|.|.+.|.| .+.|.|||+ |.
T Consensus 83 ~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~ 162 (240)
T 1moe_A 83 EADDVATYYCQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVKQRPEQ 162 (240)
T ss_dssp CGGGCEEEEEEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTS
T ss_pred ChhhCEEEEEEEccCCceeecCCEEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEEEcCccCCCCEEEEEEECCCC
Confidence 999999999999998765 3446678887743 244557778899999999999999987 469999995 32
Q ss_pred eee-----------------cCCceEEEEe--CCeEEEEEcccCccCceeEEEEEEcC
Q psy7042 223 VVQ-----------------SDDRFKFTVL--DDYIIIFIKEIRKEDAGDYTVNLSNS 261 (2245)
Q Consensus 223 ~l~-----------------~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~a~n~ 261 (2245)
.+. ...++.+... ....+|.|.++..+|+|.|+|.|.+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~ 220 (240)
T 1moe_A 163 GLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSEDTAVYYCAPFGY 220 (240)
T ss_dssp CCEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECST
T ss_pred CcEEEEEEcccCCccccCccccccEEEEEcccCCEEEEEECcCCHHHCEEEEEEEEec
Confidence 221 1234555433 45578999999999999999999853
No 228
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.73 E-value=2.5e-17 Score=185.08 Aligned_cols=181 Identities=14% Similarity=0.138 Sum_probs=135.2
Q ss_pred eeccCCceEEcCCCeEEEEEEecCcCC-----CeEEEee-CCEeccCCceEEEEec---CcEEEEEEeeeccCCCeEEEE
Q psy7042 1700 FIVPLKDLVVPLGKLLTLQCEATGTPV-----PKCRWLR-NGREISSGARYRVETA---GGVFRLHFNEVTDVDNGDYTC 1770 (2245)
Q Consensus 1700 ~~~~~~~~~~~~G~~v~L~C~~~~~p~-----~~v~W~~-~~~~l~~~~~~~~~~~---~~~~~L~i~~v~~~d~G~Y~C 1770 (2245)
+..++..+.+.+|+++.|.|.+.+.|. +.+.|+| ++.......++.+..+ .+..+|.|.+++.+|+|.|+|
T Consensus 5 v~~p~~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 84 (202)
T 3bp6_B 5 VTAPKEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRC 84 (202)
T ss_dssp EECSCSEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEE
T ss_pred EecCCcCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEE
Confidence 344556688999999999999998876 7899999 5544444556555443 256789999999999999999
Q ss_pred EEecCceeeEEEEEEEecCCCccccCCCceEEcCCCeEEEEEEEeccCCcEEEEEECCEEeecCCceEEEEcCCeEEEEE
Q psy7042 1771 EAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFI 1850 (2245)
Q Consensus 1771 ~~~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~l~i 1850 (2245)
.+.|..+.....+.|.|..++..... ....+.+|+.+.|.|.+.|.|.+.+.|++++..+... ......+....+.|
T Consensus 85 ~~~~~~~~~~~~~~l~V~~~~~~p~~-~~~~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~~~~--~~~~~~~~~~~~~i 161 (202)
T 3bp6_B 85 LVICGAAWDYKYLTVKVKASYMRIDT-RILEVPGTGEVQLTCQARGYPLAEVSWQNVSVPANTS--HIRTPEGLYQVTSV 161 (202)
T ss_dssp EEEETTEEEEEEEEEEEEBCCCCEEE-EEEECTTTCCEEEEEEEEEBSCCEEEETTCCSCCEEE--EEECTTSCEEEEEE
T ss_pred EEEeCCCcceEEEEEEecCCCCcccE-EEEecCCCCeEEEEEEccccCCceEEEEeCCCCccCc--eeeCCCCCEEEEEE
Confidence 99999998888889998876531110 1124567999999999999999999999987654321 11111233456778
Q ss_pred cccCcccceEEEEEEEcCCeeeEEEEEEEEeCC
Q psy7042 1851 KEIRKEDAGDYTVNLSNSSGSVSGTFTINITGL 1883 (2245)
Q Consensus 1851 ~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 1883 (2245)
..+..+|.|.|+|.|.|..|.....+.|.|...
T Consensus 162 ~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~v~~~ 194 (202)
T 3bp6_B 162 LRLKPQPSRNFSCMFWNAHMKELTSAIIDPLSR 194 (202)
T ss_dssp EEECCCTTCCEEEEEEETTTTEEEEEEECC---
T ss_pred EEEEcCCCCEEEEEEEcCCcccccEEEEEecCc
Confidence 899999999999999999999998888877553
No 229
>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus}
Probab=99.72 E-value=3.8e-15 Score=185.10 Aligned_cols=411 Identities=13% Similarity=0.092 Sum_probs=258.3
Q ss_pred CCcccEEeeeeCceEEEEecCCCCCCCCccceEEEeeeecCCCceEEecceeeeceEEEecCCCCceeeEEEEEEecccc
Q psy7042 904 PPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFVRVRNLAIGSTYEFRVMAENQYGL 983 (2245)
Q Consensus 904 ~p~~l~~~~~~~~~~~l~W~~p~~~~g~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~ 983 (2245)
.|.++.+..-+-.....+|+.|...+ .-.-|++-........ .....+.+.|..|.|++ +.+.+......
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-- 75 (488)
T 2q7n_A 6 DDKDLKCTTNNMRVWDCTWPAPLGVS--PGTVKDICIKDRFHSC-----HPLETTNVKIPALSPGD-HEVTINYLNGF-- 75 (488)
T ss_dssp ---CCCCEESSSSEEEEECCCCSSSC--CSCEEEEEEESSSEEE-----EECSSSEEEEECCCSSC-EEEEEEESSSC--
T ss_pred CCccceeEecCceEEEEeeeCcCccC--CCceEEEEEecCCcee-----EEeccceeEcccCCCCc-ceEEEeeccCc--
Confidence 47778887777778899999986443 3455777654322111 11356789999999999 47776632221
Q ss_pred CCCccccCcccccCCCCCCCCCCCCeeEee-cCCeEEEEecCCCCC-CCCccceEEEEEEecCCc--cceeccccc-cCC
Q psy7042 984 SKPALTIDPIKAKHPFDVPGAPGAPKGVDS-TEDSISLVWSKPRHD-GGSPIQRYIVEKRLISDD--KWIKASMAH-IPD 1058 (2245)
Q Consensus 984 ~~~s~~~~~~~~~t~~~~p~~p~~~~~~~~-~~~~v~l~W~~p~~~-~~~~i~~y~v~~~~~~~~--~~~~~~~~~-~~~ 1058 (2245)
. ....+..+.-..+|.+|.++.+... ...++.|+|..+... .......|.|++...... .|....... ...
T Consensus 76 ---~-~~~~~~~~~~~~~p~~p~~l~~~~~~~~~~l~~~W~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~ 151 (488)
T 2q7n_A 76 ---Q-SKFTLNEKDVSLIPETPEILDLSADFFTSSLLLKWNDRGSALPHPSNATWEIKVLQNPRTEPVALVLLNTMLSGK 151 (488)
T ss_dssp ---E-EEEEECSTTCEECCCCCCEEECCEETTTTEEEEEECBCGGGSCSSEEEEEEEECCCSSSSCSCCCEECCEECSSS
T ss_pred ---e-eEEEEecCccccCCCCCeeEEEEEecCCCeEEEEEeCCCccccccCCeEEEEEEEEeccceEEEEEEEEEEecCC
Confidence 1 0011222222345889999987655 479999999865532 111124677776433221 122110000 001
Q ss_pred cceeEEEEeecccccCCccCchhhhhhhhhcccccccccccCCcEEEEEEEEEe----cCCCCCCCCCCcceeecCCCCC
Q psy7042 1059 TSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVN----AAGQGPWSSSSDIIMCCAPPCA 1134 (2245)
Q Consensus 1059 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~v~A~n----~~G~~~~s~~~~~~~~~~~p~~ 1134 (2245)
+..-.-.|. ....|. +..|.++||+.. -.|.+.+|.++...++... .+
T Consensus 152 ~~~~~w~w~--------------------------s~~pl~-c~~~~v~iR~~~~~~~~~~~~~ws~Ws~~~~~~~~-~~ 203 (488)
T 2q7n_A 152 DTVQHWNWT--------------------------SDLPLQ-CATHSVSIRWHIDSPHFSGYKEWSDWSPLKNISWI-RN 203 (488)
T ss_dssp CBCCEEEEE--------------------------CSSCCS-SSCCEEEEEEEECCTTCCSCBCCCCCCCCEECCCC-CC
T ss_pred CceeEeecc--------------------------CCCccc-ccceEEEEEEEeccccccCCCCCcCCCChhhcCCc-CC
Confidence 011111221 133344 889999999996 4467778888877776443 11
Q ss_pred CccccCCCceeEEEEcCCeEEEEEEeeecCCCcceEEeCCeecCCCCcEEEEEccceEEEEecCccccccceeEEEEEEc
Q psy7042 1135 PKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQLVN 1214 (2245)
Q Consensus 1135 p~~~~~~~~~~~~v~~~~~~~l~~~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~a~n 1214 (2245)
..+. ..+.+..+..|+.+.|.|.+. .+.+.|+++|..+... + ..+....|.+.++.. .+.|.|.|...+
T Consensus 204 t~i~--v~P~~~~v~~Gs~vtl~C~a~---~~~I~W~~ng~~i~~~-r----i~~~~~~L~I~nl~~-sd~g~y~~~C~~ 272 (488)
T 2q7n_A 204 TETN--VFPQDKVVLAGSNMTICCMSP---TKVLSGQIGNTLRPLI-H----LYGQTVAIHILNIPV-SENSGTNIIFIT 272 (488)
T ss_dssp SSCC--EECTTCEEESSCCCEEEECCS---SCEEEEEETTEECCCE-E----CSSSCEEEECCSCCC-CCSSCEEEEEEE
T ss_pred CceE--ECCCCCEEcCCCCEEEEEECC---CCEEEEEECCEECchh-h----ccceEEEEEEeCCCc-ccCCcEEEEEEc
Confidence 2221 234566789999999999987 4689999999887542 1 234556788888754 677777776552
Q ss_pred CCcceeEEEEEEEECCCCCCCCCceeeeccCCcEEEEecCCCCC--CCcceeeeEEEEeecc-ccceEEcccc-eecceE
Q psy7042 1215 TVGSDSASCKVYVVDKPSPPQGPLDVSDITPESCSLSWKPPLDD--GGSPITNYVVEKYESA-TGFWSKLSSF-VRSPAY 1290 (2245)
Q Consensus 1215 ~~g~~~~s~~~~v~~~p~~p~~~~~~~~~~~~s~~l~W~~p~~~--~g~~i~~Y~v~~~~~~-~~~~~~~~~~-~~~~~~ 1290 (2245)
+.......+.+..+|.+| .++.+......++.++|.++... .|.++.+|.++|.... ...|...... .....+
T Consensus 273 --~~~i~~~~l~v~~pP~~P-~nl~C~~~~~~svtcsW~pg~~~~l~G~~~t~Y~L~y~~~g~~~~c~~~~~~~~~~~~c 349 (488)
T 2q7n_A 273 --DDDVYGTVVFAGYPPDVP-QKLSCETHDLKEIICSWNPGRITGLVGPRNTEYTLFESISGKSAVFHRIEGLTNETYRL 349 (488)
T ss_dssp --SSCEEEEEEEEECCCCCC-CSCEEEBSSSSEEEEEECCCSCCCCCTTSSCEEEEEETTTCCEEEEECSSCCCSSCEEE
T ss_pred --CCeEEEEEEEeeCCCCCC-cccEEEEcCCCEEEEEEeCCCcCCCCCCCceeEEEEEEECCCCCCCccccccCCceEEE
Confidence 222346677777777776 56887777889999999998765 3456889999886542 2233332221 233456
Q ss_pred EecCCCCCceEEEEEEEeccccCCCCcccCCcccccCCCCCCCCCCCCeeeeccCCcEEEEeeCCCCCCCccceeeEEEE
Q psy7042 1291 DVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLL 1370 (2245)
Q Consensus 1291 ~l~~L~~~t~Y~~~v~A~n~~G~~~~s~~~~~~~~~~~~~~p~~p~~~~~~~~~~~s~~l~W~~p~~~~g~~i~~y~i~~ 1370 (2245)
.+..+..++.|.|+|.|.|..|.+. +.....+ .....|++|.++.+..++.+++.|+|.+|...+| .+..|+|.|
T Consensus 350 t~~l~~~~t~Y~f~V~A~N~~G~~~-S~~~~~~---~~~v~P~PP~nl~v~~~s~~sl~LsW~pP~~~~g-~~l~YeV~Y 424 (488)
T 2q7n_A 350 GVQMHPGQEIHNFTLTGRNPLGQAQ-SAVVINV---TERVAPHDPTSLKVKDINSTVVTFSWYLPGNFTK-INLLCQIEI 424 (488)
T ss_dssp EEECCSSCCCCEEEEEEEETTEEEE-EEEECCG---GGTBCCCCCEEEEEEECSTTCEEEEEEEEEECSS-SEEEEEEEE
T ss_pred EEcCCCCccEEEEEEEEEeCCCCcc-ceEEEEe---cCCCCCCCCeEEEEEecCCCEEEEEEeCCCCCCC-cceEEEEEE
Confidence 6655555699999999999999843 3211111 1223578888899888899999999999875554 789999999
Q ss_pred ecCCC
Q psy7042 1371 KTPTG 1375 (2245)
Q Consensus 1371 ~~~~~ 1375 (2245)
+..+.
T Consensus 425 r~~~~ 429 (488)
T 2q7n_A 425 CKANS 429 (488)
T ss_dssp BCTTS
T ss_pred EECCC
Confidence 97654
No 230
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.72 E-value=3.6e-17 Score=178.14 Aligned_cols=166 Identities=19% Similarity=0.201 Sum_probs=132.1
Q ss_pred CCCceeccCCceEEcCCCeEEEEEEecCcCCCe-EEEeeCCEeccCCceEEEEecCcEEEEEEeeeccCCCeEEEEEEec
Q psy7042 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPK-CRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYN 1774 (2245)
Q Consensus 1696 ~~p~~~~~~~~~~~~~G~~v~L~C~~~~~p~~~-v~W~~~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n 1774 (2245)
.+|.+...+....+.+|++++|.|.+.+.|.+. +.|+|++..+... ...|.|.+++.+|+|.|+|.+.|
T Consensus 6 ~~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~~~----------~~~L~i~~~~~~d~G~Y~C~~~n 75 (175)
T 1fnl_A 6 PKAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQ----------ASSYFIDAATVNDSGEYRCQTNL 75 (175)
T ss_dssp CCCEEEEESCCSEEETTCCEEEEEECCCBTTBCCCEEEETTEEEESS----------CSEEEESSCCGGGCEEEEEECSS
T ss_pred CCCEEEEcCCceeeeCCCcEEEEeeCCCCCCCcceEEEECCEEccCC----------ceEEEEeCCCcccCEEEEEEeeC
Confidence 577788778878999999999999999988765 8999999887532 23599999999999999999998
Q ss_pred CceeeEEEEEEEecCCCccccCCCceEEcCCCeEEEEEEEeccCC-cEEEEEECCEEeecCCceEEEEcCCeEEEEEccc
Q psy7042 1775 SVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQP-MEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEI 1853 (2245)
Q Consensus 1775 ~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~-~~v~W~~~g~~l~~~~~~~~~~~~~~~~l~i~~~ 1853 (2245)
..+ ...+.|.|..++.+... ....+.+|+.+.|.|.+.+.++ +.+.|+|+|..+... .....|.|.++
T Consensus 76 ~~~--s~~~~l~V~~~~~~~~~-~~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~~--------~~~~~L~i~~v 144 (175)
T 1fnl_A 76 STL--SDPVQLEVHIGWLLLQA-PRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKYF--------HHNSDFHIPKA 144 (175)
T ss_dssp SCC--CCCEEEEEECSSEEEEC-SCSEEETTCCEEEEEEECTTCCCEEEEEEETTEEEEEE--------EECCCEEESSC
T ss_pred Ccc--cccEEEEEeCCCceeeC-CCceecCCCCEEEEEEcCCCCCceEEEEEECCeEccCC--------CCCCEEEEccc
Confidence 654 44567777766554443 3467889999999999998765 599999999987432 12347999999
Q ss_pred CcccceEEEEEEEcCCe-eeEEEEEEEEeC
Q psy7042 1854 RKEDAGDYTVNLSNSSG-SVSGTFTINITG 1882 (2245)
Q Consensus 1854 ~~~d~G~Y~C~a~n~~g-~~~~~~~l~v~~ 1882 (2245)
..+|+|.|+|.|.|..| ..+..+.|.|.+
T Consensus 145 ~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~ 174 (175)
T 1fnl_A 145 TLKDSGSYFCRGLVGSKNVSSETVNITITQ 174 (175)
T ss_dssp CGGGCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred ChhhCeEEEEEEEcCCCCccCccEEEEEeC
Confidence 99999999999999766 455567777753
No 231
>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens}
Probab=99.72 E-value=4.5e-17 Score=193.68 Aligned_cols=273 Identities=16% Similarity=0.190 Sum_probs=168.0
Q ss_pred CCCCCCCeeeeecCCcEEEEeeCCCCCCCcccccEEEEeeeCCCCCeEEEc---eeee--eeEEEecCCCCCEEEEEEEE
Q psy7042 670 PDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVG---NTRF--TTMAITGLSPGHQYEFRVYA 744 (2245)
Q Consensus 670 P~~p~~~~~~~~~~~si~lsW~~p~~~~~~~~~~y~v~~~~~~~~~w~~~~---~~~~--~~~~i~~L~p~t~y~~~v~a 744 (2245)
..+|.++.+... ..++.|+|++|.. +.+.+. |.|+|+..+...|.... .... +.++..+|.|++.|.|||.|
T Consensus 4 l~~P~nv~~~~~-n~~~iL~W~pp~~-~~~~v~-Y~V~y~~~~~~~W~~~~~c~~~~~~~c~lt~~~l~~~~~Y~~rV~A 80 (306)
T 3s98_A 4 LKSPQKVEVDII-DDNFILRWNRSDE-SVGNVT-FSFDYQKTGMDNWIKLSGCQNITSTKCNFSSLKLNVYEEIKLRIRA 80 (306)
T ss_dssp ----CCCEEEEE-TTEEEEECC---------CE-EEEEEEESSCSSCEECTTCSSBSSSEEECCC---CTTSCEEEEEEE
T ss_pred CCCCcEeEEEEE-CCeEEEEEcCCCC-CCCCeE-EEEEEEECCCCCcEECCCccCCCCCEEEccccccCCCCcEEEEEEE
Confidence 467889988876 4557899997643 344565 99999998778898652 2222 33444567899999999999
Q ss_pred EecccCCCCCCCCccEEecCccccccccccccccCCCceeecccccccccCCceEEEEeeeccCccccccccceeccccc
Q psy7042 745 ENVYGRSDPSTTSDLITTKDTFKKQIKKRQYDFDETGKKIRGKADEKVSDYDQYVFDIYSKYVPQPVDIKTSSVYDHYDI 824 (2245)
Q Consensus 745 ~n~~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 824 (2245)
.| .|.|.++....+.+..
T Consensus 81 ~n-~~~S~~s~~~~f~~~~------------------------------------------------------------- 98 (306)
T 3s98_A 81 EK-ENTSSWYEVDSFTPFR------------------------------------------------------------- 98 (306)
T ss_dssp EC-SSCEEEEECCCBCHHH-------------------------------------------------------------
T ss_pred Ee-CCcCCCEeeeeEechh-------------------------------------------------------------
Confidence 99 6654433211110000
Q ss_pred ccccccCceeEEEEeeecccCCeeEEEeeccCCchhhhhhheeeeeeeccCCCceEeecccccCCcceEEEEEEecCCCC
Q psy7042 825 LEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFEVLDRPHP 904 (2245)
Q Consensus 825 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ 904 (2245)
...++|
T Consensus 99 --------------------------------------------------------------------------~~~~~p 104 (306)
T 3s98_A 99 --------------------------------------------------------------------------KAQIGP 104 (306)
T ss_dssp --------------------------------------------------------------------------HCBCCC
T ss_pred --------------------------------------------------------------------------hCccCC
Confidence 013455
Q ss_pred CcccEEeeeeCceEEEEecCCCCCC-----CCccceEEEeeeecCCCc-eEEecceeeeceEEEecCCCCceeeEEEEEE
Q psy7042 905 PENLHADEFAGDSLTLYWTPPRDNG-----GSEITNYVVEKKDYNSTV-WTKVSSYVTTPFVRVRNLAIGSTYEFRVMAE 978 (2245)
Q Consensus 905 p~~l~~~~~~~~~~~l~W~~p~~~~-----g~~i~~y~i~~~~~~~~~-~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~ 978 (2245)
|. +.+.. .+++|.|+|.|+...+ ...+.+|+|.|...+... |. .......+.|.+|.|++.|.|+|+|.
T Consensus 105 P~-v~~~~-~~~si~v~w~P~~~~~~~~~~~g~~l~Y~v~y~~~~~~~~~~---~~~~~~~~~l~~L~p~t~Y~~~V~A~ 179 (306)
T 3s98_A 105 PE-VHLEA-EDKAIVIHISPGTKDSVMWALDGLSFTYSLVIWKNSSGVEER---IENIYSRHKIYKLSPETTYCLKVKAA 179 (306)
T ss_dssp CE-EEEEE-CSSCEEEEEECC---CCCC-----CCEEEEEEEETTTCCCEE---EEEECTEEEECSCCTTCEEEEEEEEE
T ss_pred Ce-EEEEE-cCCEEEEEEECCCCCCcceeccCCcEEEEEEEEECCCCCeEE---EecccceEEEccCCCCCeEEEEEEEE
Confidence 65 66554 3468999999665421 137899999988755443 33 22346789999999999999999999
Q ss_pred e--ccccCCCccccCcccccCCCCCCC-CCCCCeeEeecCCeEEEEecCCCCCCCCccceEEEEEE--------ecCCcc
Q psy7042 979 N--QYGLSKPALTIDPIKAKHPFDVPG-APGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKR--------LISDDK 1047 (2245)
Q Consensus 979 n--~~g~~~~s~~~~~~~~~t~~~~p~-~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~y~v~~~--------~~~~~~ 1047 (2245)
| ..|.|+.+ ..+.+.+..+.|. +|.++.+... .+++.|+|++|... ..|.+.|. ..+...
T Consensus 180 ~~~~~g~g~~S---~~~~~~T~~~~p~~~P~~v~~~~~-~~s~~l~W~~p~~~-----~~~~v~~~~gy~~~~~~~~~~~ 250 (306)
T 3s98_A 180 LLTSWKIGVYS---PVHCIKTTVENELPPPENIEVSVQ-NQNYVLKWDYTYAN-----MTFQVQWLHAFLKRNPGNHLYK 250 (306)
T ss_dssp EGGGTEECCCC---CCEEEECCSCCSSCCCEEEEEEEE-TTEEEEEEECSSSS-----CEEEEEEEEGGGGSCC----CC
T ss_pred EccCCCCCCCC---CcEeeEecCCCcCCCCceEEEEEe-cCEEEEEeCCCCCc-----EEEEEEEehhhhhccccccccC
Confidence 9 67888877 4556666666664 7788888554 57899999987622 24555544 223455
Q ss_pred ceeccc-cccCCcceeEEEEeecccccCCccCchhhhhhhhhccccccccc-ccCCcEEEEEEEEEecCCCCCCCCCCcc
Q psy7042 1048 WIKASM-AHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTS-LIENHEYEFRVCAVNAAGQGPWSSSSDI 1125 (2245)
Q Consensus 1048 ~~~~~~-~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-L~~~~~Y~~~v~A~n~~G~~~~s~~~~~ 1125 (2245)
|.+... ..++... |.+.+ |.+...|.|+|+|.|..|.|.++....+
T Consensus 251 W~~~~~c~~~~~~~--------------------------------c~~~~~~~~~~~Y~~RV~A~n~~~~s~~s~~~~~ 298 (306)
T 3s98_A 251 WKQIPDCENVKTTQ--------------------------------CVFPQNVFQKGIYLLRVQASDGNNTSFWSEEIKF 298 (306)
T ss_dssp CEECGGGTTBSSSE--------------------------------EEEEGGGSCSSEEEEEEEEECSSCBCCCCCCEEE
T ss_pred ceECCCceeCCCcc--------------------------------ccCchhhcccCCEEEEEEEccCCCcccccccccc
Confidence 663211 1122111 24555 3455599999999999998888876554
Q ss_pred ee
Q psy7042 1126 IM 1127 (2245)
Q Consensus 1126 ~~ 1127 (2245)
.+
T Consensus 299 ~~ 300 (306)
T 3s98_A 299 DT 300 (306)
T ss_dssp EC
T ss_pred Cc
Confidence 43
No 232
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.72 E-value=2.4e-17 Score=188.65 Aligned_cols=179 Identities=16% Similarity=0.117 Sum_probs=131.8
Q ss_pred CCcceEEeCCCeEEEEEEEeeecCC---ceEEEECCeeccCCC------------------eEEEEE---cCcEEEEEEe
Q psy7042 96 PLKDLVVPLGKLLTLQCEATGTPVP---KCRWLRNGREISSGA------------------RYRVET---AGGVFRLHFN 151 (2245)
Q Consensus 96 ~~~~~~v~~G~~v~L~C~~~g~p~~---~i~W~~~g~~l~~~~------------------~~~~~~---~~~~~~L~i~ 151 (2245)
.|..+.+.+|++++|.|.+.+.|.+ .|.|+|++..+.... |+.+.. ..+..+|.|.
T Consensus 5 ~p~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~ 84 (218)
T 4frw_A 5 TSDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLR 84 (218)
T ss_dssp CCSEEEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEES
T ss_pred CCCeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEe
Confidence 4567889999999999999988765 489999876554221 111111 1123469999
Q ss_pred eeccCCCeEEEEEEEcCccccee-EEEEEecCCCe-eecCCCceEEcCCCeEEEEEEEecCCCceEEEeeCceeeecCCc
Q psy7042 152 EVTDVDNGDYTCEAYNSVGFAHT-SSRVKIGTPPR-IDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDR 229 (2245)
Q Consensus 152 ~~~~~d~G~Y~C~a~n~~g~~~~-~~~l~V~~~P~-~~~~~~~~~v~~G~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~ 229 (2245)
+++.+|+|.|.|.+.+..+.... ...+.+..++. ....+....+.+|+.+.|.|.+.|.|+|.|+|+|++..+.....
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~g~p~p~i~W~~~~~~~~~~~~ 164 (218)
T 4frw_A 85 NAVQADEGEYECRVSTFPAGSFQARLRLRVLVPPLPSLNPGPALEEGQGLTLAASCTAEGSPAPSVTWDTEVKGTTSSRS 164 (218)
T ss_dssp SCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCCCEEEECSCEETTCCSEEEEEEEEEEBSCCEEEEEESSCCEEEEEE
T ss_pred eccHHHCCceeEEEEeccCceeeeEEEEEEeeeccceeeeeeeeeeeeccccceeeeccCCcCceEEEEECCcccccCce
Confidence 99999999999999987665444 44455544443 34445667788899999999999999999999999988765433
Q ss_pred eEEEEe-CCeEEEEEcccCccCceeEEEEEEcCCcceEEEEEEEEe
Q psy7042 230 FKFTVL-DDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINIT 274 (2245)
Q Consensus 230 ~~~~~~-~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 274 (2245)
...... ...+.|.|.++..+|+|.|+|.|.|.+|.....++|.|.
T Consensus 165 ~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~v~ 210 (218)
T 4frw_A 165 FKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHILH 210 (218)
T ss_dssp EECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECC
T ss_pred EecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEEEE
Confidence 221111 123479999999999999999999999988777766654
No 233
>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D*
Probab=99.72 E-value=1.2e-16 Score=195.96 Aligned_cols=310 Identities=15% Similarity=0.079 Sum_probs=168.3
Q ss_pred CcCEEEEEEEEeCCCCceeEEEEEeeCCCCCCCCCeeeeec-CCcEEEEeeCCCC-C-CCcccccEEEEeeeCCCCCeEE
Q psy7042 642 VDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQFPTVEDIG-HDSLALVWRAPIW-D-GGSNITNYIVEKREHPMSSWIR 718 (2245)
Q Consensus 642 ~d~g~y~C~a~n~~g~~~~~~~l~v~~~P~~p~~~~~~~~~-~~si~lsW~~p~~-~-~~~~~~~y~v~~~~~~~~~w~~ 718 (2245)
...+.++..+.|..|.+...- ....|.||.++.+.+.+ .+++.|+|++|.. + .++.+..|.++|+......|..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~---~~v~~~pP~nl~v~~~~~~~~v~LsW~p~~~~~~~~~~~~~Y~v~~~~~~~~~w~~ 83 (380)
T 3lb6_C 7 AVGCLYTFLISTTFGCTSSSD---TEIKVNPPQDFEIVDPGYLGYLYLQWQPPLSLDHFKECTVEYELKYRNIGSETWKT 83 (380)
T ss_dssp ---------------------------CCCCCEEEEEECCSSSSEEEEEEECCCC------CCCEEEEEEEETTCSSCEE
T ss_pred ehhhhhhheeecccccccCCc---ccccCCcCCceEEEecCcCceEEEEECCCCCccccccceEEEEEEECCCCCCcceE
Confidence 345677788888887552211 12258999999998877 6999999998754 2 3356899999999887778987
Q ss_pred EceeeeeeEEEecCCCCCEEEEEEEEEec----ccCCCCCCCCccEEecCccccccccccccccCCCceeeccccccccc
Q psy7042 719 VGNTRFTTMAITGLSPGHQYEFRVYAENV----YGRSDPSTTSDLITTKDTFKKQIKKRQYDFDETGKKIRGKADEKVSD 794 (2245)
Q Consensus 719 ~~~~~~~~~~i~~L~p~t~y~~~v~a~n~----~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 794 (2245)
..... +....++..+..|.|||+|.|. .|.|.+|..+...+....
T Consensus 84 ~~~~~--~~~~~~~~l~~~y~~rV~a~~~~~~~~g~g~~S~~s~~~~~~~~----------------------------- 132 (380)
T 3lb6_C 84 IITKN--LHYKDGFDLNKGIEAXIHTLLPWQCTNGSEVQSSWAETTYWISP----------------------------- 132 (380)
T ss_dssp EEESS--SEEEEECCTTSCEEEEEEEECCHHHHSSSCCBCCCEEEEECCCC-----------------------------
T ss_pred EEecc--EEEEEeecCCCceEEEEEeecCCcccCCccCccccchhhcccCC-----------------------------
Confidence 75543 3345567779999999999976 677777764433321100
Q ss_pred CCceEEEEeeeccCccccccccceecccccccccccCceeEEEEeeecccCCeeEEEeeccCCchhhhhhheeeeeeecc
Q psy7042 795 YDQYVFDIYSKYVPQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQL 874 (2245)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 874 (2245)
.
T Consensus 133 -----------------------------------e-------------------------------------------- 133 (380)
T 3lb6_C 133 -----------------------------------Q-------------------------------------------- 133 (380)
T ss_dssp -----------------------------------C--------------------------------------------
T ss_pred -----------------------------------C--------------------------------------------
Confidence 0
Q ss_pred CCCceEeecccccCCcceEEEEEEecCCCCCcccEEeeeeCceEEEEecCCCCCCCCccceEEEeeeecCCCceEEec--
Q psy7042 875 HHPKLINLHDAFEDDDEMVLIFEVLDRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVS-- 952 (2245)
Q Consensus 875 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~p~~l~~~~~~~~~~~l~W~~p~~~~g~~i~~y~i~~~~~~~~~~~~~~-- 952 (2245)
..+|.+|+++.+.......+.++|+++.+. + ...+|.+.|+..+...+....
T Consensus 134 ------------------------g~P~~~P~nl~C~~~~~~~l~csW~p~~~~-~-~~~~Y~l~y~~~~~~~~~~C~~~ 187 (380)
T 3lb6_C 134 ------------------------GIPETXVQDMDCVYYNWQYLLCSWKPGIGV-L-LDTNYNLFYWYEGLDHALQCVDY 187 (380)
T ss_dssp ------------------------SCTTSSCEEEEEEEETTTEEEEEEECC--------CCEEEEEECTTCSSCEECSEE
T ss_pred ------------------------CCCCCCCcEeEEEECCCcEEEEEEcCCCCC-C-CCccEEEEEEECCCCccccCCCc
Confidence 036789999999998999999999987653 2 578899999875544333221
Q ss_pred -ce-eeeceEEEe--cCCCCceeeEEEEEEeccccCCCccccCcccccCCC-CCCCCCCCCeeEeecCCeEEEEecCCCC
Q psy7042 953 -SY-VTTPFVRVR--NLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPF-DVPGAPGAPKGVDSTEDSISLVWSKPRH 1027 (2245)
Q Consensus 953 -~~-~~~~~~~i~--~L~p~~~y~~~v~a~n~~g~~~~s~~~~~~~~~t~~-~~p~~p~~~~~~~~~~~~v~l~W~~p~~ 1027 (2245)
.. .......+. ++.+++.|.|+|.|.|..|.+... .+.+.+.. ..|.+|.++++...+.+.+.|+|++|..
T Consensus 188 ~~~~g~~~~C~~~~~~~~~~~~Y~i~V~a~n~~G~~~s~----~~~~~~~~~v~p~pP~~l~v~~~~~~~l~l~W~~P~~ 263 (380)
T 3lb6_C 188 IKADGQNIGCRFPYLEASDYKDFYICVNGSSENKPIRSS----YFTFQLQNIVKPLPPVYLTFTRESSCEIKLKWSIPLG 263 (380)
T ss_dssp EEC--CEEEEECCCCTTCSSSCEEEEEEEC-----CCCE----EEEECGGGSCCCCCCEEEEEC-------CEEEECCSS
T ss_pred cccCCceEEEEeCCCcccceeEEEEEEEEEcCCeeeccc----cEEEcHHHcccCCCCceEEEEEcCCCeEEEEECCCCC
Confidence 11 122234444 678899999999999988876543 22333333 4678898998887778899999999876
Q ss_pred CCCCccceEEEEEEecCCccceeccccccCCcceeEEEEeecccccCCccCchhhhhhhhhccccccccc-ccCCcEEEE
Q psy7042 1028 DGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTS-LIENHEYEF 1106 (2245)
Q Consensus 1028 ~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-L~~~~~Y~~ 1106 (2245)
..+..+..|.|+|+.. +..|...... . .+.|.+ |.+++.|.|
T Consensus 264 ~~~~~~l~Yev~y~~~-~~~w~~~~~~---~---------------------------------~~~l~~~L~p~t~Y~~ 306 (380)
T 3lb6_C 264 PIPARCFDYEIEIRED-DTTLVTATVE---N---------------------------------ETYTLKTTNETRQLCF 306 (380)
T ss_dssp SCCSTTEEEEECC---------CCEES---S---------------------------------SCC------------C
T ss_pred CCCcceEEEEEEEEeC-CCCceEeccc---c---------------------------------eEEEeCccCCCcEEEE
Confidence 5555578999999874 3344322110 0 015888 999999999
Q ss_pred EEEEEec---CCCCCCCCCCcceeecCC
Q psy7042 1107 RVCAVNA---AGQGPWSSSSDIIMCCAP 1131 (2245)
Q Consensus 1107 ~v~A~n~---~G~~~~s~~~~~~~~~~~ 1131 (2245)
+|+|... .+.|.+|..+......++
T Consensus 307 qVRa~~~~~~~~~g~WSeWS~~~~~~t~ 334 (380)
T 3lb6_C 307 VVRSKVNIYCSDDGIWSEWSDKQCWEGE 334 (380)
T ss_dssp CEEEEECTTTCSSCCCCCCCCC------
T ss_pred EEEEEEcccCCCCCCCCCCCCCEEEeCC
Confidence 9999965 344556666555544443
No 234
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.72 E-value=9.9e-18 Score=191.09 Aligned_cols=176 Identities=18% Similarity=0.240 Sum_probs=138.8
Q ss_pred cCCceEEcCCCeEEEEEEecCcC----CCeEEEee----------------CCEeccC-----CceEEEEe---cCcEEE
Q psy7042 1703 PLKDLVVPLGKLLTLQCEATGTP----VPKCRWLR----------------NGREISS-----GARYRVET---AGGVFR 1754 (2245)
Q Consensus 1703 ~~~~~~~~~G~~v~L~C~~~~~p----~~~v~W~~----------------~~~~l~~-----~~~~~~~~---~~~~~~ 1754 (2245)
++..+.+.+|++++|.|.+.+.+ .+.+.|++ ++..+.. ..|+.+.. ..+..+
T Consensus 6 ~~~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 85 (214)
T 3jz7_A 6 PEQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDAS 85 (214)
T ss_dssp CEEEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCC
T ss_pred CCceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCccc
Confidence 34568899999999999998876 46899988 4443321 33444432 224556
Q ss_pred EEEeeeccCCCeEEEEEEecCceeeEEEEEEEecCCCccccCCCceEEcCCCeEEEEEEE-eccCCcEEEEEECC--EEe
Q psy7042 1755 LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFY-AGDQPMEVSLTKNG--RVV 1831 (2245)
Q Consensus 1755 L~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~v~W~~~g--~~l 1831 (2245)
|.|.+++.+|+|.|+|.+.|..|.....+.|.|..+|.+...+....+.+|+.+.|.|.+ .|.|.+.+.|++++ ..+
T Consensus 86 L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~~~~~~~ 165 (214)
T 3jz7_A 86 INVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSGTRCFVDGSEEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQTM 165 (214)
T ss_dssp EEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCBSCEEEEESCCBTTCCEEEEEECSBCCSSCEEEEEECSTTCCC
T ss_pred EEEccCChhhCeEEEEEEEeCCCccccEEEEEEEcCCCCceeeeecceecCCcEEEEecCCCCCCCCEEEEEECCCCCcc
Confidence 999999999999999999999998888999999999887665555567889999999999 89999999999954 333
Q ss_pred ecCCceEEEEcCCeEEEEEcccCcccceEEEEEEEcCCeeeEEEEEEEEeC
Q psy7042 1832 QSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITG 1882 (2245)
Q Consensus 1832 ~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 1882 (2245)
...... ......|.|.++..+|+|.|+|.|.|..|..+..+.|.|..
T Consensus 166 ~~~~~~----~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 212 (214)
T 3jz7_A 166 PTPWLA----EMTSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVVP 212 (214)
T ss_dssp CGGGGG----GTTSSEEEECSCCGGGCEEEEEEEECSSCEEEEEEEECCBC
T ss_pred Ccccee----ccCCCEEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEEEeC
Confidence 322111 12233899999999999999999999999999999988873
No 235
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.72 E-value=3.3e-17 Score=189.80 Aligned_cols=170 Identities=15% Similarity=0.254 Sum_probs=126.2
Q ss_pred ceecCCcceEEeCCCeEEEEEEEeeecCCceEEEEC--Ceec---------------cCCCeEEEEE-cCcEEEEEEeee
Q psy7042 92 DFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRN--GREI---------------SSGARYRVET-AGGVFRLHFNEV 153 (2245)
Q Consensus 92 ~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~--g~~l---------------~~~~~~~~~~-~~~~~~L~i~~~ 153 (2245)
.++..|..+.+.+|++|+|.|. .+.|.+.|.|+|+ +..+ ....|+.+.. .++..+|.|.++
T Consensus 2 ~v~q~p~~~~v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v 80 (238)
T 2p1y_A 2 AVTQSPRNKVAVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELA 80 (238)
T ss_dssp CEEEECSEEEEETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSC
T ss_pred cceECccceEEeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecC
Confidence 3556778889999999999999 7788899999995 2111 1134666654 234557999999
Q ss_pred ccCCCeEEEEEEEcCcccc-----eeEEEEEecCCC------------eeecCCCceEEcCCCeEEEEEEEecCCCceEE
Q psy7042 154 TDVDNGDYTCEAYNSVGFA-----HTSSRVKIGTPP------------RIDRMPNALYIPEGDNTKVKIFYAGDQPMEVS 216 (2245)
Q Consensus 154 ~~~d~G~Y~C~a~n~~g~~-----~~~~~l~V~~~P------------~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~i~ 216 (2245)
+.+|+|.|+|.|.|..|.. ...+.|.|...+ .+...|....+.+|++++|.|.+.+.|.+.+.
T Consensus 81 ~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~ 160 (238)
T 2p1y_A 81 TPSQTSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTVWEGETAILNCSYENSAFDYFP 160 (238)
T ss_dssp CGGGCEEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSEEEEETTSCEEEEEECCCTTCCEEE
T ss_pred CcccCeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCceEEEeCCCeEEEEEEEecCCCCcEE
Confidence 9999999999999986531 124567776654 55666888889999999999999999999999
Q ss_pred EeeCc--e---ee---------ecCCceEEEE--eCCeEEEEEcccCccCceeEEEEEEcCC
Q psy7042 217 LTKNG--R---VV---------QSDDRFKFTV--LDDYIIIFIKEIRKEDAGDYTVNLSNSS 262 (2245)
Q Consensus 217 W~~~g--~---~l---------~~~~~~~~~~--~~~~~~L~i~~~~~~d~G~Y~C~a~n~~ 262 (2245)
|||++ . .+ ....++.+.. .....+|.|.++..+|+|.|+|.|.|..
T Consensus 161 W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 161 WYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAIDTN 222 (238)
T ss_dssp EEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEEEEEEEETT
T ss_pred EEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEEEEEEeeCC
Confidence 99963 1 11 1234444432 2345789999999999999999999974
No 236
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.72 E-value=1.3e-16 Score=186.93 Aligned_cols=191 Identities=16% Similarity=0.212 Sum_probs=137.0
Q ss_pred CCceecCCcceEEeCCCeEEEEEEEeee--cCCceEEEECC--e---ec-------------cCCCeEEEEEc--CcEEE
Q psy7042 90 KPDFIVPLKDLVVPLGKLLTLQCEATGT--PVPKCRWLRNG--R---EI-------------SSGARYRVETA--GGVFR 147 (2245)
Q Consensus 90 ~P~~~~~~~~~~v~~G~~v~L~C~~~g~--p~~~i~W~~~g--~---~l-------------~~~~~~~~~~~--~~~~~ 147 (2245)
++..+..|..+.+.+|++|+|.|.+.+. |.+.|.|+|.. . .+ ....|+.+..+ ++..+
T Consensus 8 ~~v~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 87 (257)
T 3gkz_A 8 KEVQLQESGPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVY 87 (257)
T ss_dssp -CEEEEEECCSEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEE
T ss_pred ccEEEECCCCeEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEE
Confidence 3334445667789999999999999984 47889999832 1 11 12346776643 45678
Q ss_pred EEEeeeccCCCeEEEEEEEcCcc----cceeEEEEEecCC--------------CeeecCCCceEEcCCCeEEEEEEEec
Q psy7042 148 LHFNEVTDVDNGDYTCEAYNSVG----FAHTSSRVKIGTP--------------PRIDRMPNALYIPEGDNTKVKIFYAG 209 (2245)
Q Consensus 148 L~i~~~~~~d~G~Y~C~a~n~~g----~~~~~~~l~V~~~--------------P~~~~~~~~~~v~~G~~~~l~C~~~g 209 (2245)
|.|.+++.+|+|.|.|.|.|..+ .....+.|.|..+ |.+...|....+.+|++++|.|.+.+
T Consensus 88 L~I~~v~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~ 167 (257)
T 3gkz_A 88 LQLKSVSSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMSASPGEKVTLTCSASS 167 (257)
T ss_dssp EEECSCCGGGCEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSEEEECTTCCEEEEEEESS
T ss_pred EEECCCChhhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCceEEEeCCCcEEEEEEEcc
Confidence 99999999999999999999732 2233566888765 66777788899999999999999999
Q ss_pred CCCc-eEEEeeC--ceeee------------cCCceEEEEeCCeEEEEEcccCccCceeEEEEEEcCCcce-EEEEEEEE
Q psy7042 210 DQPM-EVSLTKN--GRVVQ------------SDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV-SGTFTINI 273 (2245)
Q Consensus 210 ~p~~-~i~W~~~--g~~l~------------~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~V 273 (2245)
.|.+ .+.|||+ +..+. ...++.+...+....|.|.++..+|+|.|.|.|.|..... ..-..|.|
T Consensus 168 ~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~l~v 247 (257)
T 3gkz_A 168 SVSSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAASYFCHQWSSFPFTFGSGTKLEI 247 (257)
T ss_dssp CCCGGGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEE
T ss_pred CccceEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCChHHCEEEEEEEccCCceEEcCCEEEEE
Confidence 8877 9999983 33221 1245555555667789999999999999999999854322 23456777
Q ss_pred ecCCCCC
Q psy7042 274 TGLPGPP 280 (2245)
Q Consensus 274 ~~~p~~~ 280 (2245)
...|..|
T Consensus 248 ~~~~~~~ 254 (257)
T 3gkz_A 248 KRAPHHH 254 (257)
T ss_dssp CCC----
T ss_pred EeCCCCC
Confidence 7655443
No 237
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.72 E-value=7.6e-17 Score=186.42 Aligned_cols=170 Identities=16% Similarity=0.231 Sum_probs=127.7
Q ss_pred ceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECC--ee---c---------cCCCeEEEEEcCcEEEEEEeeeccCC
Q psy7042 92 DFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNG--RE---I---------SSGARYRVETAGGVFRLHFNEVTDVD 157 (2245)
Q Consensus 92 ~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g--~~---l---------~~~~~~~~~~~~~~~~L~i~~~~~~d 157 (2245)
.++..|..+.+.+|++|+|.|.+.+.|.+.|.|+|++ .. + ....|+.+...++..+|.|.+++.+|
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 82 (242)
T 2znx_A 3 VLTQSPATLSVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETED 82 (242)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGG
T ss_pred cEEEcCCeEEEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChHH
Confidence 4667788899999999999999999998999999953 21 1 12457887766777789999999999
Q ss_pred CeEEEEEEEcCcccc-eeEEEEEecCCCe-------------eecCCCceEEcCCCeEEEEEEEecCC--CceEEEeeC-
Q psy7042 158 NGDYTCEAYNSVGFA-HTSSRVKIGTPPR-------------IDRMPNALYIPEGDNTKVKIFYAGDQ--PMEVSLTKN- 220 (2245)
Q Consensus 158 ~G~Y~C~a~n~~g~~-~~~~~l~V~~~P~-------------~~~~~~~~~v~~G~~~~l~C~~~g~p--~~~i~W~~~- 220 (2245)
+|.|.|.|.|..+.. ...+.|.|..+|. ....+....+.+|++++|.|.+.|.| .+.+.|||+
T Consensus 83 ~G~Y~C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~ 162 (242)
T 2znx_A 83 FGMYFCQQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKPSQTLSLTCSVTGDSITSDYXSXIRKF 162 (242)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEEECCSEECTTSCEEEEEEEESSCGGGSCEEEEEEC
T ss_pred CEEEEEeEecCCceEECCCEEEEEcCCCCCCcccccccccceeeecCCcceecCCCeEEEEEEEEccccCCcceeeEeeC
Confidence 999999999986532 2346788887653 22333445699999999999999876 578999994
Q ss_pred -ceeee----------------cCCceEEEEe--CCeEEEEEcccCccCceeEEEEEEcC
Q psy7042 221 -GRVVQ----------------SDDRFKFTVL--DDYIIIFIKEIRKEDAGDYTVNLSNS 261 (2245)
Q Consensus 221 -g~~l~----------------~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~a~n~ 261 (2245)
|..+. ...++.+... ....+|.|.+++.+|+|.|+|.|.|.
T Consensus 163 ~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~ 222 (242)
T 2znx_A 163 PGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTATYYCANXDG 222 (242)
T ss_dssp TTSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGGCEEEEEEETTS
T ss_pred CCCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCcCEEEEEeccCC
Confidence 33221 1345555432 34568999999999999999999984
No 238
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=99.72 E-value=5.2e-16 Score=188.05 Aligned_cols=274 Identities=14% Similarity=0.139 Sum_probs=197.4
Q ss_pred cccCCCceEEcCCCeEEEEEEEeccC-CcEEEEEECCEEeecCCceEEEEcCCeEEEEEcccCcccceEEEEEEEcCCee
Q psy7042 1793 IDRMPNALYIPEGDNTKVKIFYAGDQ-PMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGS 1871 (2245)
Q Consensus 1793 ~~~~~~~~~~~~g~~~~l~C~~~~~p-~~~v~W~~~g~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~ 1871 (2245)
+...+..+.+..|++++|.|.+.+.+ .+.|.|++++..+.... ...... ...|.|.++...|+|.|+|. ..|.
T Consensus 9 ~~~p~~~v~~~~G~~v~l~C~~~~~~~~~~i~W~~~~~~~~~~~-~~~~~~--~~~L~i~~v~~~d~G~Y~C~---~~g~ 82 (325)
T 1n26_A 9 QEVARGVLTSLPGDSVTLTCPGVEPEDNATVHWVLRKPAAGSHP-SRWAGM--GRRLLLRSVQLHDSGNYSCY---RAGR 82 (325)
T ss_dssp CCCCTTEEEECTTCCEEEECTTSCTTCCSEEEEEEECSSSSCCC-EEEEEE--SSEEEECSCCGGGCEEEEEE---SSSS
T ss_pred cccCCCcEECCCCCcEEEEeCCCCCCCCceEEEEECCccCCccc-cccccc--cceEEecccchhhCeEeEEE---eCCE
Confidence 33444445567999999999988764 78999999887652221 122222 24799999999999999999 3677
Q ss_pred eEEEEEEEEeCCCCCCCCCceec-ccccceEEEEecCCCCCCCeeeeEEEEEEEcC-C--CCceE-EEe--eecCcceEE
Q psy7042 1872 VSGTFTINITGLPGPPIGPLDVS-EITKHTCTLHWNPPKYDGGLKVTHYVVERRDI-S--MPHWI-CIS--TTCHDTTFI 1944 (2245)
Q Consensus 1872 ~~~~~~l~v~~~p~~~~~~~~~~-~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~-~--~~~~~-~~~--~~~~~~~~~ 1944 (2245)
....+.|.|..+|..|. +.+. ......+.+.|.++.. ++ ....|.+.+... + ...|. ... .......+.
T Consensus 83 ~~~~~~L~V~~pP~~P~--l~c~~~~~~~~~~c~W~~~~~-~~-~~~~y~l~~~~~~~~~~~~~~~~c~~~~~~~~~~c~ 158 (325)
T 1n26_A 83 PAGTVHLLVDVPPEEPQ--LSCFRKSPLSNVVCEWGPRST-PS-LTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQ 158 (325)
T ss_dssp CSCEEEEEECCCCCCCC--CEEEBSSTTSCEEEEECCSSC-CC-TTCEEEEEEEEESSSSCEEEEEEEEEETTTTEEEEE
T ss_pred EeeeEEEEeccCCCCCc--eeEEeecCCCcEEEEECCCCC-CC-CCceEEEEEEEccCCCCCcccccCCCCCCCCCEEEE
Confidence 78889999998888775 4443 2335689999997653 33 336788877643 2 22332 222 123456788
Q ss_pred ecCCC-CCCeEEEEEEEECCCCCCCCCCCcCceeccCCCCCCCCCCCcEEEEEcC--CeEEEEEeccCCC-CCCceeEEE
Q psy7042 1945 VQGLT-EGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGG--DFVNLSWDKPLDD-GGSRIQGYW 2020 (2245)
Q Consensus 1945 i~~l~-~~~~y~~~~~a~n~~g~~~~s~~~~~~~~~~~~~~p~~p~~~~~~~~~~--~~v~l~W~~p~~~-~~~~i~~y~ 2020 (2245)
+..+. ++..|.|+|.|.|..|.+..... ........+|.+|.++.+....+ +++.|+|.+|... .+..+.+|.
T Consensus 159 i~~~~~~~~~Y~f~v~A~N~~G~~~s~~~---~~~~~~~v~P~pP~~l~v~~~~~~~~sv~lsW~~p~~~~~~~~~~~Y~ 235 (325)
T 1n26_A 159 LAVPEGDSSFYIVSMCVASSVGSKFSKTQ---TFQGCGILQPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFE 235 (325)
T ss_dssp ECCCTTCCCEEEEEEEEEETTEEEECCCE---EEETTTCBCCCCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEE
T ss_pred ECCCcccCcEEEEEEEEEcCCCCcccCcE---EEeeccccCCCCCcceEEEEecCCCCEEEEEECCCCccCCCcEeEEEE
Confidence 88876 78999999999999998642111 11122234578888887777654 5899999998663 456789999
Q ss_pred EEEeeecCccceEEEEEEeccceEEeCCCcCCceEEEEEEEEeccccCCCcCCCCccccc
Q psy7042 2021 IDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIK 2080 (2245)
Q Consensus 2021 i~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~s~~v~~~ 2080 (2245)
|+|+......|...... .....+.|.+|.++..|.++++|.|..|.+..+.-+..+...
T Consensus 236 V~yr~~~~~~W~~~~~~-~~~~~~~l~~L~p~t~Y~~rVrA~n~~g~G~~S~wS~~~~~~ 294 (325)
T 1n26_A 236 LRYRAERSKTFTTWMVK-DLQHHCVIHDAWSGLRHVVQLRAQEEFGQGEWSEWSPEAMGT 294 (325)
T ss_dssp EEEEETTCSCCEEEECG-GGCSEEEESSCCTTCCEEEEEEEEETTTBSCCCCCCCCEEEC
T ss_pred EEEEeCCCCCCEEEccc-CCceEEEEeCCCCCCeEEEEEEEecCCCCCCCcCCCCcccee
Confidence 99999888889875542 344689999999999999999999999988888777666544
No 239
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.72 E-value=9.9e-17 Score=187.64 Aligned_cols=181 Identities=15% Similarity=0.247 Sum_probs=136.5
Q ss_pred cceEEeCCCeEEEEEEEeeec--CCceEEEEC--Cee---c--------------cCCCeEEEEEc--CcEEEEEEeeec
Q psy7042 98 KDLVVPLGKLLTLQCEATGTP--VPKCRWLRN--GRE---I--------------SSGARYRVETA--GGVFRLHFNEVT 154 (2245)
Q Consensus 98 ~~~~v~~G~~v~L~C~~~g~p--~~~i~W~~~--g~~---l--------------~~~~~~~~~~~--~~~~~L~i~~~~ 154 (2245)
..+.+.+|++|+|.|.+.+.| .+.|.|+|. +.. + ....|+.+..+ ++..+|.|.+++
T Consensus 10 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 89 (256)
T 3umt_A 10 GLELVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRSLT 89 (256)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CceEEcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECCCC
Confidence 346789999999999998865 678999983 221 1 01246776643 356789999999
Q ss_pred cCCCeEEEEEEEcC----cccceeEEEEEecC----------------CCeeecCCCceEEcCCCeEEEEEEEecCCCce
Q psy7042 155 DVDNGDYTCEAYNS----VGFAHTSSRVKIGT----------------PPRIDRMPNALYIPEGDNTKVKIFYAGDQPME 214 (2245)
Q Consensus 155 ~~d~G~Y~C~a~n~----~g~~~~~~~l~V~~----------------~P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~ 214 (2245)
.+|+|.|.|.|.|. .+.....+.|.|.. +|.+...|....+.+|++++|.|.+.+.|.+.
T Consensus 90 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~ 169 (256)
T 3umt_A 90 SEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSSLSASLGERVSITCRASQDIGSN 169 (256)
T ss_dssp GGGCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEECSEEEECTTCCEEEEEEESSCCTTC
T ss_pred cccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCCeEEEECCCCEEEEEEEecCCCcE
Confidence 99999999999987 33334456788875 67778888889999999999999999999889
Q ss_pred EEEeeC--ceeee------------cCCceEEEEeCCeEEEEEcccCccCceeEEEEEEcCCcce-EEEEEEEEecCCC
Q psy7042 215 VSLTKN--GRVVQ------------SDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV-SGTFTINITGLPG 278 (2245)
Q Consensus 215 i~W~~~--g~~l~------------~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~p~ 278 (2245)
+.|||+ +..+. ...++.+...+...+|.|.++..+|+|.|+|.|.|..+.. .....|.|...+.
T Consensus 170 v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~L~V~~~~~ 248 (256)
T 3umt_A 170 LNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASSPPTFGGGTKLEIKRAAA 248 (256)
T ss_dssp EEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEECSSSSCEECCCEEEEEC----
T ss_pred EEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEEEEEEEeeCCCcEECCCEEEEEECCCc
Confidence 999994 32221 1345666666677789999999999999999999865432 3467788876553
No 240
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.72 E-value=4.6e-17 Score=181.42 Aligned_cols=170 Identities=14% Similarity=0.151 Sum_probs=129.1
Q ss_pred CCCceeccCCceEEcCCCeEEEEEEecCcCCCeEEEeeCCEeccCCceEEEEecCcEEEEEEeeeccCCCeEEEEEEecC
Q psy7042 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNS 1775 (2245)
Q Consensus 1696 ~~p~~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~ 1775 (2245)
.+|.+...+.. .+.+|++++|.|.+.+ +.+.+.|+|++..+.... ...........|.|.+++.+|+|.|+|.+.|.
T Consensus 4 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~-~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 80 (196)
T 3p2t_A 4 PKPTLWAEPGS-VISWGNSVTIWCQGTL-EAREYRLDKEESPAPWDR-QNPLEPKNKARFSIPSMTEDYAGRYRCYYRSP 80 (196)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTSCSCSEE-ECCCSSSSEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCEEEccCCC-cCCCCCcEEEEeeCCC-CCCEEEEEECCCCCcccc-cccccCCceEEEEeccCCcccCceEEEEEeCC
Confidence 47777777776 8999999999999988 667999999998775421 11112245567999999999999999999999
Q ss_pred cee--eEEEEEEEecC---CCccccCCCceEEcCCCeEEEEEEEeccCCcEEEEEECCEEeecCCce-EEEEcCCeEEEE
Q psy7042 1776 VGF--AHTSSRVKIGT---PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRF-KFTVLDDYIIIF 1849 (2245)
Q Consensus 1776 ~g~--~~~~~~l~V~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~v~W~~~g~~l~~~~~~-~~~~~~~~~~l~ 1849 (2245)
.|. ....+.|.|.. +|.+...+.. .+.+|++++|.|.+.+. ++.+.|+|+|..+...... ..........|.
T Consensus 81 ~g~~~~s~~~~l~V~~~~~~p~~~~~~~~-~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~ 158 (196)
T 3p2t_A 81 VGWSQPSDPLELVMTGAYSKPTLSALPSP-LVTSGKSVTLLCQSRSP-MDTFLLCKERAAHPLLCLRSEHGAQQHQAEFP 158 (196)
T ss_dssp TEEBCCCCCEEEEEECSSCCCEEEEESCS-EECTTCCEEEEEEEEEE-EEEEEEEETTCCCGGGSEEEEEEEEEEEEEEE
T ss_pred CcccCCCccEEEEecCCCCCCEEEeCCcc-eecCCCeEEEEEecCCC-CCEEEEEeCCCcccceeecccccccCcceEEE
Confidence 873 34456777753 4555544433 67899999999999884 5689999999877543322 112223456899
Q ss_pred EcccCcccceEEEEEEEcCCe
Q psy7042 1850 IKEIRKEDAGDYTVNLSNSSG 1870 (2245)
Q Consensus 1850 i~~~~~~d~G~Y~C~a~n~~g 1870 (2245)
|.++..+|+|.|+|.|.|..+
T Consensus 159 i~~v~~~d~G~Y~C~a~n~~~ 179 (196)
T 3p2t_A 159 MSPVTSVHGGTYRCFSSHGFS 179 (196)
T ss_dssp ECSCCGGGCEEEEEEEECGGG
T ss_pred eCCCcccCCCeEEEEEEcCCC
Confidence 999999999999999999876
No 241
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.72 E-value=1.8e-17 Score=203.71 Aligned_cols=185 Identities=20% Similarity=0.244 Sum_probs=153.0
Q ss_pred CCCCCceeccCCceEEcCCCeEEEEEEecCcCCCeEEEeeCCEeccCCceEEEEecCcEEEEEEeeeccCCCe-EEEEEE
Q psy7042 1694 GGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNG-DYTCEA 1772 (2245)
Q Consensus 1694 ~~~~p~~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G-~Y~C~~ 1772 (2245)
...+|.+...+....+.+|+++.|.|.+.|.|.+.+.|++++..+...... .......+|.|.+++.+|+| .|+|.|
T Consensus 155 ~c~~P~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~~--~~~~~~~~L~i~~v~~~D~G~~Y~C~a 232 (347)
T 2ifg_A 155 SCGVPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMK--SGGLPSLGLTLANVTSDLNRKNVTCWA 232 (347)
T ss_dssp TCCCCEEEEECCSSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEECC--CCCSSEEEEEEESCCSTTTTCCEEECC
T ss_pred cCCCCceeccCCceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeeccccc--ceecccceEEEeeCChHHCCCeEEEEE
Confidence 456888988888899999999999999999999999999998765422111 12345567999999999999 999999
Q ss_pred ecCceeeEEEEEEEecCCCccccCCCceEEcCCCeEEEEEEEeccCCcEEEEEECCEEeecCCceEEEEcC-------Ce
Q psy7042 1773 YNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLD-------DY 1845 (2245)
Q Consensus 1773 ~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~-------~~ 1845 (2245)
.|..|.....+.|.|..+|.+ ....+.+|+.+.|.|.+.|.|.|.|+|+++|..+............ ..
T Consensus 233 ~n~~g~~~~~~~l~V~~~P~i----~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~ 308 (347)
T 2ifg_A 233 ENDVGRAEVSVQVNVSFPASV----QLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRH 308 (347)
T ss_dssp EETTEECCEEECCCCBEEEEE----EECCCEESSSEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECCCCTTCCCEE
T ss_pred EcCCCCEEEEEEEEEcCCCee----eeccCccCceEEEEEEeeecCCCcEEEEeCCEECCCCcceeeEEEeecCCCcccc
Confidence 999999888899999888885 1123457899999999999999999999999998865554433322 25
Q ss_pred EEEEEcccCcccceEEEEEEEcCCeeeEEEEEEEEeCCC
Q psy7042 1846 IIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLP 1884 (2245)
Q Consensus 1846 ~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p 1884 (2245)
..|.|.++..+|+|.|+|.|.|..|..+..+.|.|..+|
T Consensus 309 ~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P 347 (347)
T 2ifg_A 309 GCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFMDNP 347 (347)
T ss_dssp EEEEESSCCGGGCEEEEEEEEETTEEEEEEEEECSCCCC
T ss_pred eEEEECCCCcccCceEEEEEecCCCceeeEEEEEecCCC
Confidence 679999999999999999999999999999999887654
No 242
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=99.71 E-value=1.2e-16 Score=181.22 Aligned_cols=193 Identities=20% Similarity=0.279 Sum_probs=149.3
Q ss_pred CCCCcccEEeeeeCceEEEEecCCCCCCCCccceEEEeeeecCC-CceEEecce------------eeeceEEEecCCCC
Q psy7042 902 PHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNS-TVWTKVSSY------------VTTPFVRVRNLAIG 968 (2245)
Q Consensus 902 P~~p~~l~~~~~~~~~~~l~W~~p~~~~g~~i~~y~i~~~~~~~-~~~~~~~~~------------~~~~~~~i~~L~p~ 968 (2245)
+.||.++.+..++.+++.|+|++|.+.++ .+.+|.|+++..+. ..|..+... .....+.+.+|.|+
T Consensus 2 ~~pP~~~~~~~~~~~sv~l~W~~p~~~~~-~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~ 80 (214)
T 2ibg_A 2 TYPPTPPNVTRLSDESVMLRWMVPRNDGL-PIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQ 80 (214)
T ss_dssp CCCCCCCEEEEEETTEEEEEEEEECCSSC-CEEEEEEEEEESSSSCCCEECSCCEECCSSSCSSSSEEEEEEEECSCCTT
T ss_pred CCCCCCCEeeEecCCEEEEEEECCCCCCC-CceEEEEEEEECCCCCcCcccccccCccccccccccCcceeEEecCCcCC
Confidence 46778888888899999999999887664 99999999998654 677766531 35678899999999
Q ss_pred ceeeEEEEEEeccccCCCccccCcccccC--CCCCCCCCCCCeeEeecCCeEEEEecCCCCCCCCccceEEEEEEecCC-
Q psy7042 969 STYEFRVMAENQYGLSKPALTIDPIKAKH--PFDVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISD- 1045 (2245)
Q Consensus 969 ~~y~~~v~a~n~~g~~~~s~~~~~~~~~t--~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~y~v~~~~~~~- 1045 (2245)
+.|.|+|.|.|..|.+..+..+..+...+ +...|.+|.++.+...+.+++.|+|++|....++++.+|.|+|+..+.
T Consensus 81 t~Y~~~V~A~n~~g~~~~s~~s~~~~~~~~~~~~~~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~ 160 (214)
T 2ibg_A 81 HTYRFRILAVYSNNDNKESNTSAKFYLQPGAALDPMPVPELLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSA 160 (214)
T ss_dssp CEEEEEEEEEETTSCEEECCCCCCEECCCSTTSCCCCCCEECCCBCCSSSCEEEEEECCTTCCGGGCCEEEEEEEETTCC
T ss_pred CEEEEEEEEEecCCCCCCCCCcccEEeccCcCCCCCCCCcccEEEEccCCeEEEEEeCCCccCCCCcceEEEEEEECCCC
Confidence 99999999999999887775444333322 233455788899988999999999999875456679999999998776
Q ss_pred ccceeccccccCCcceeEEEEeecccccCCccCchhhhhhhhhcccccccccccCCcEEEEEEEEEecCCCCCCCCCCcc
Q psy7042 1046 DKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSDI 1125 (2245)
Q Consensus 1046 ~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~v~A~n~~G~~~~s~~~~~ 1125 (2245)
..|..+....... . .++|.+|.+++.|.|+|+|.|..|.|++|....+
T Consensus 161 ~~~~~~~~~~~~~--~------------------------------~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~ 208 (214)
T 2ibg_A 161 GEYFKATIEGAHA--R------------------------------SFKIAPLETATMYEFKLQSFSAASASEFSALKQG 208 (214)
T ss_dssp SCCEEEEEECTTC--C------------------------------EEEECSCCTTCEEEEEEEEECSSCBCCCCCCEEE
T ss_pred cceEEeeccCCcc--e------------------------------EEEeCCCCCCCEEEEEEEEEcCCccCCCcceEee
Confidence 5565543322111 1 1269999999999999999999999988876555
Q ss_pred ee
Q psy7042 1126 IM 1127 (2245)
Q Consensus 1126 ~~ 1127 (2245)
.|
T Consensus 209 ~T 210 (214)
T 2ibg_A 209 RT 210 (214)
T ss_dssp EC
T ss_pred Ee
Confidence 44
No 243
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=99.71 E-value=9.9e-17 Score=180.79 Aligned_cols=188 Identities=27% Similarity=0.345 Sum_probs=148.6
Q ss_pred EEEeeCCCCCCCCCeeeeecCCcEEEEeeCCCCCCCcccccEEEEeeeCCCCCeEEEcee-----eeeeEEEecCCCCCE
Q psy7042 663 KIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGNT-----RFTTMAITGLSPGHQ 737 (2245)
Q Consensus 663 ~l~v~~~P~~p~~~~~~~~~~~si~lsW~~p~~~~~~~~~~y~v~~~~~~~~~w~~~~~~-----~~~~~~i~~L~p~t~ 737 (2245)
.+...++|.+|.++.+...+. ++.|+|.+|..+++..+.+|.|+|+......|...... ....+.+.+|+|++.
T Consensus 2 ~l~~~~~P~~P~~~~~~~~~~-s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~ 80 (209)
T 2vkw_A 2 PLAQADTPSSPSIDQVEPYSS-TAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETT 80 (209)
T ss_dssp ---CCCCCCCCEEEEEEECSS-CEEEEEECCSCCCSSCCCEEEEEEEESSCCCCEEEEEEHHHHHHHSEEEECCCCTTCE
T ss_pred CccccCCCcCCcccEeeeccC-eEEEEEcCCCcCCCcceeEEEEEEeeCCCCCceEeEeeccCCCccceEEeCCCCCCCe
Confidence 355678899999999888777 79999998876677779999999999888888766432 235899999999999
Q ss_pred EEEEEEEEecccCCCCCCCCccEEecCccccccccccccccCCCceeecccccccccCCceEEEEeeeccCccccccccc
Q psy7042 738 YEFRVYAENVYGRSDPSTTSDLITTKDTFKKQIKKRQYDFDETGKKIRGKADEKVSDYDQYVFDIYSKYVPQPVDIKTSS 817 (2245)
Q Consensus 738 y~~~v~a~n~~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 817 (2245)
|.|+|.|.|..|.+.++....+.+.+
T Consensus 81 Y~~~V~A~n~~G~~~~s~~~~~~T~~------------------------------------------------------ 106 (209)
T 2vkw_A 81 YAVRLAALNGKGLGEISAASEFKTQP------------------------------------------------------ 106 (209)
T ss_dssp EEEEEEEEETTEECCCCCCEEEECCC------------------------------------------------------
T ss_pred EEEEEEEEcCCcccCCcccccccccC------------------------------------------------------
Confidence 99999999999988777643321110
Q ss_pred eecccccccccccCceeEEEEeeecccCCeeEEEeeccCCchhhhhhheeeeeeeccCCCceEeecccccCCcceEEEEE
Q psy7042 818 VYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFE 897 (2245)
Q Consensus 818 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 897 (2245)
T Consensus 107 -------------------------------------------------------------------------------- 106 (209)
T 2vkw_A 107 -------------------------------------------------------------------------------- 106 (209)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EecCCCCCcccEEeeeeCceEEEEecCCCCCCCCccceEEEeeeecCCCceEEec-ceeeeceEEEecCCCCceeeEEEE
Q psy7042 898 VLDRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVS-SYVTTPFVRVRNLAIGSTYEFRVM 976 (2245)
Q Consensus 898 ~~~~P~~p~~l~~~~~~~~~~~l~W~~p~~~~g~~i~~y~i~~~~~~~~~~~~~~-~~~~~~~~~i~~L~p~~~y~~~v~ 976 (2245)
..+|.+|.++.+...+.+++.|+|.+|.+.+ +.+.+|.|+|+. ....|.... .....+.+.|.+|.|++.|.|+|+
T Consensus 107 -~~~P~~P~~~~~~~~~~~sv~l~W~~p~~~~-~~i~~Y~v~~~~-~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~ 183 (209)
T 2vkw_A 107 -VREPSAPKLEGQMGEDGNSIKVNLIKQDDGG-SPIRHYLVRYRA-LSSEWKPEIRLPSGSDHVMLKSLDWNAEYEVYVV 183 (209)
T ss_dssp -SCSCCCCEEEEEECTTSSCEEEEEECCCCTT-SCCCEEEEEEEE-TTSCCCCCEEECTTCCEEEECSCCTTCEEEEEEE
T ss_pred -CCCCCCCcccccccccCCeEEEEEECcccCC-CCCceEEEEEEC-CCCCCceeeecCCCccEEEecCCCCCCEEEEEEE
Confidence 0267888888888888999999999985444 599999999998 455554322 233557899999999999999999
Q ss_pred EEeccccCCCcc
Q psy7042 977 AENQYGLSKPAL 988 (2245)
Q Consensus 977 a~n~~g~~~~s~ 988 (2245)
|.|..|.|+++.
T Consensus 184 A~n~~G~s~~S~ 195 (209)
T 2vkw_A 184 AENQQGKSKAAH 195 (209)
T ss_dssp EEETTEECCCEE
T ss_pred EEeCCccCCcch
Confidence 999999988873
No 244
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.71 E-value=2.3e-17 Score=185.71 Aligned_cols=176 Identities=20% Similarity=0.198 Sum_probs=137.8
Q ss_pred eeccCCceEEcCCCeEEEEEE-ecCcCC-CeEEEeeCCEecc--CCceEEEEecCcEEEEEEeeeccCCCeEEEEEEecC
Q psy7042 1700 FIVPLKDLVVPLGKLLTLQCE-ATGTPV-PKCRWLRNGREIS--SGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNS 1775 (2245)
Q Consensus 1700 ~~~~~~~~~~~~G~~v~L~C~-~~~~p~-~~v~W~~~~~~l~--~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~ 1775 (2245)
+..++..+.+.+|+++.|.|. +.+.|. +.+.|++++..+. ...+......+ ..|.|.+++.+|+|.|+|.+.|.
T Consensus 11 ~~~~~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~~~~~--~~L~i~~v~~~d~G~Y~C~~~~~ 88 (201)
T 3s97_C 11 PPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTN--GNLYIANVEASDKGNYSCFVSSP 88 (201)
T ss_dssp CSSCCCCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEECTTT--CCEEESSCCGGGCEEEEEEEEEG
T ss_pred CcCCCceEEEECCCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEEEcCC--CeEEECcCCcccCeEEEEEEEec
Confidence 334557789999999999999 888898 9999999998774 22333333233 34999999999999999999997
Q ss_pred ceeeEE---EEEEEec-------CCCccccCCCceEEcCCCeEEEEEEEeccCCcEEEEEECCEEeecCCceEEEEcCCe
Q psy7042 1776 VGFAHT---SSRVKIG-------TPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDY 1845 (2245)
Q Consensus 1776 ~g~~~~---~~~l~V~-------~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~ 1845 (2245)
.+.... ...+.+. .+|.+...+....+.+|+.+.|.|.+.|.|.+.+.|++++..+..... + ....
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~--~--~~~~ 164 (201)
T 3s97_C 89 SITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAE--I--STSG 164 (201)
T ss_dssp GGTEEEECCCEEEEEECCSSCCCEEEEEEEECCCEEEETTCCEEEEEEEEEESCCEEEEEETTBCCCTTCE--E--ETTT
T ss_pred CCCcchhhcccceeeccccccCCCCCceEecCCceEEecCCcEEEEEEccCCCCCceEEEeCCCcCCCcee--e--cCCC
Confidence 665443 2333332 345565555578899999999999999999999999999997764422 2 2233
Q ss_pred EEEEEcccCcccceEEEEEEEcCCeeeEEEEEEEEe
Q psy7042 1846 IIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINIT 1881 (2245)
Q Consensus 1846 ~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 1881 (2245)
..|.|.++..+|+|.|+|.|.|..|..+..+.|.|.
T Consensus 165 ~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 200 (201)
T 3s97_C 165 AVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQ 200 (201)
T ss_dssp TEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CEEEEccCChhhCEEEEEEEEecCCceeeeEEEEEe
Confidence 479999999999999999999999999999998885
No 245
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.71 E-value=3.9e-17 Score=178.21 Aligned_cols=169 Identities=17% Similarity=0.144 Sum_probs=132.1
Q ss_pred CCCceeccCCceEEcCCCeEEEEEEecCcCCC-eEEEeeCCEeccCCceEEEEecCcEEEEEEeeeccCCCeEEEEEEec
Q psy7042 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVP-KCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYN 1774 (2245)
Q Consensus 1696 ~~p~~~~~~~~~~~~~G~~v~L~C~~~~~p~~-~v~W~~~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n 1774 (2245)
.+|.+...+....+.+|++++|.|.+.+.+.+ .+.|++++..+... ...|.|.+++.+|+|.|+|.+.|
T Consensus 3 ~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~~~----------~~~L~i~~v~~~d~G~Y~C~~~~ 72 (176)
T 1f2q_A 3 QKPKVSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEET----------NSSLNIVNAKFEDSGEYKCQHQQ 72 (176)
T ss_dssp -CCCCEEESSCSEEETTCCEEEECCTTCC----CCEEEETTEECSCC----------SSEEEECSCCGGGCEEEEEECTT
T ss_pred CCCEEEcCCCCcceecCCcEEEEEeCCCCCCcceEEEEECCeECCCC----------ceEEEEeccceecCEEEEEEcCC
Confidence 47788888888899999999999999988775 69999999887532 23499999999999999999998
Q ss_pred CceeeEEEEEEEecCCCccccCCCceEEcCCCeEEEEEEEe-ccCCcEEEEEECCEEeecCCceEEEEcCCeEEEEEccc
Q psy7042 1775 SVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYA-GDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEI 1853 (2245)
Q Consensus 1775 ~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~-~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~l~i~~~ 1853 (2245)
..+. ..+.|.|..++.+... ....+.+|+.+.|.|.+. +.|.+.+.|+++|..+.... ....|.|.++
T Consensus 73 ~~~s--~~~~l~V~~~~~~~~~-~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~--------~~~~L~i~~v 141 (176)
T 1f2q_A 73 VNES--EPVYLEVFSDWLLLQA-SAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYWY--------ENHNISITNA 141 (176)
T ss_dssp SSCC--CCEEEEEECSSEEEEE-SCSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECCSCC--------CSSEEEESSC
T ss_pred cccc--ccEEEEEeCcceeecC-CcceeeCCCCEEEEEEecCCCCceEEEEEECCEEEeeec--------CCCeEEECCC
Confidence 6653 3466667655544433 345788999999999995 56778999999999884331 2347999999
Q ss_pred CcccceEEEEEEEcCCe-eeEEEEEEEEeCCCC
Q psy7042 1854 RKEDAGDYTVNLSNSSG-SVSGTFTINITGLPG 1885 (2245)
Q Consensus 1854 ~~~d~G~Y~C~a~n~~g-~~~~~~~l~v~~~p~ 1885 (2245)
..+|+|.|+|.|.|..+ ..+..+.|.|..+|.
T Consensus 142 ~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~p~ 174 (176)
T 1f2q_A 142 TVEDSGTYYCTGKVWQLDYESEPLNITVIKAPR 174 (176)
T ss_dssp CGGGCEEEEEEEEETTEEEECCCEEEEEECSCC
T ss_pred CcccCEEEEEEEEeCCcceEecCEEEEEecCCC
Confidence 99999999999999754 455668888887664
No 246
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.71 E-value=1.1e-16 Score=177.93 Aligned_cols=175 Identities=15% Similarity=0.201 Sum_probs=128.9
Q ss_pred eEEcCCCeEEEEEEecCcCCCeEEEeeCC-EeccCCceEEEEecCcEEEEEEeeeccCCCeEEEEEEecCceeeEEEEEE
Q psy7042 1707 LVVPLGKLLTLQCEATGTPVPKCRWLRNG-REISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRV 1785 (2245)
Q Consensus 1707 ~~~~~G~~v~L~C~~~~~p~~~v~W~~~~-~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~l 1785 (2245)
..+.+|++++|.|.+.|.|.+.+.|+++. .++. .+. ...+....|.|.+++.+|+|.|+|.|.|..|.....+.|
T Consensus 11 ~~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~~--~~~--~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~l 86 (202)
T 1vca_A 11 YLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPLN--GKV--TNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEKGIQV 86 (202)
T ss_dssp EEEETTSCEEEEEEEESCSSCEEEEEETTCCCCS--SEE--EEETTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEE
T ss_pred EEEcCCCcEEEEEeecCCCCCeEEEECCCCCCcc--ceE--EEcCCccEEEECcCCHHHCEEEEEEEEECCceEeeEEEE
Confidence 44569999999999999999999999843 2221 221 223445569999999999999999999999988888999
Q ss_pred EecCCCccccCCCceEEcCCCeEEEEEEEeccCC---cEEEEEECCEEeecCCceEEE----EcCCeEEEEEcccCcccc
Q psy7042 1786 KIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQP---MEVSLTKNGRVVQSDDRFKFT----VLDDYIIIFIKEIRKEDA 1858 (2245)
Q Consensus 1786 ~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~---~~v~W~~~g~~l~~~~~~~~~----~~~~~~~l~i~~~~~~d~ 1858 (2245)
.|..+|..........+.+|+.++|.|.+.|.++ +.|+|+|+|..|......... .......|.|.....+|.
T Consensus 87 ~V~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~~~~~~~~~~~~~~~l~i~~~~~d~~ 166 (202)
T 1vca_A 87 EIYSFPKDPEIHLSGPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVIEDIG 166 (202)
T ss_dssp EEEBCCSCCEEEESSCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECCSCCSSCCCEEEEEEEEECCCGGGTT
T ss_pred EEEeCCCCCEeCCceEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECcccccccccCcCcceEEEEEEEEEeeeccCC
Confidence 9988775432222256889999999999998643 479999999987543110000 001124567888888899
Q ss_pred eEEEEEEEcCCee-------eEEEEEEEEeCCCC
Q psy7042 1859 GDYTVNLSNSSGS-------VSGTFTINITGLPG 1885 (2245)
Q Consensus 1859 G~Y~C~a~n~~g~-------~~~~~~l~v~~~p~ 1885 (2245)
|.|+|.|.|..|. .+.++.|.|..+|.
T Consensus 167 g~ytC~A~n~~~~~~~~~~~~~~~~~L~V~y~P~ 200 (202)
T 1vca_A 167 KVLVCRAKLHIDEMDSVPTVRQAVKELQVYISPK 200 (202)
T ss_dssp CEEEEEEEECSCCCTTSCSEEEEEEECCEECCC-
T ss_pred CeEEEEEEccccCCCCcceeEeeEEEEEEecCCC
Confidence 9999999998875 45678888887664
No 247
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.71 E-value=8e-17 Score=177.99 Aligned_cols=159 Identities=15% Similarity=0.163 Sum_probs=118.4
Q ss_pred cCCcceEEeCCCeEEEEEEEee-ecCCceEEEECCeecc---CC---------------CeEEEEEcCcEEEEEEeeecc
Q psy7042 95 VPLKDLVVPLGKLLTLQCEATG-TPVPKCRWLRNGREIS---SG---------------ARYRVETAGGVFRLHFNEVTD 155 (2245)
Q Consensus 95 ~~~~~~~v~~G~~v~L~C~~~g-~p~~~i~W~~~g~~l~---~~---------------~~~~~~~~~~~~~L~i~~~~~ 155 (2245)
..|..+.+.+|++|+|.|.+.+ .+.+.|.|+|+|..+. .. +|+.+. .+ .+|.|.+++.
T Consensus 3 ~~p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~-~~--~sL~I~~v~~ 79 (193)
T 2if7_A 3 LTPLMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFT-QS--YSLQLSNLKM 79 (193)
T ss_dssp CCCEEEEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEEC-TT--CCEEECSCCG
T ss_pred CCCeEEEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEEC-CC--eEEEECCCCc
Confidence 3566788999999999999975 4557899999986542 10 144443 22 3599999999
Q ss_pred CCCeEEEEEEEcCcccceeEEEEEecCCCe---eecCCCceEEcCCC-eEEEEEEEecC-CCceEEEeeCceeeecCCce
Q psy7042 156 VDNGDYTCEAYNSVGFAHTSSRVKIGTPPR---IDRMPNALYIPEGD-NTKVKIFYAGD-QPMEVSLTKNGRVVQSDDRF 230 (2245)
Q Consensus 156 ~d~G~Y~C~a~n~~g~~~~~~~l~V~~~P~---~~~~~~~~~v~~G~-~~~l~C~~~g~-p~~~i~W~~~g~~l~~~~~~ 230 (2245)
+|+|.|+|.|.|..+.....+.|.|..+|. +...+ .....|. .++|.|.+.|. |.|.|+|+|+|..+..+.
T Consensus 80 ~D~G~Y~C~~~~~~~~~~~~~~L~V~~~~~~p~i~~~~--~~~~~g~~~v~L~C~~~g~~p~p~i~W~~~g~~l~~~~-- 155 (193)
T 2if7_A 80 EDTGSYRAQISTKTSAKLSSYTLRILRQLRNIQVTNHS--QLFQNMTCELHLTCSVEDADDNVSFRWEALGNTLSSQP-- 155 (193)
T ss_dssp GGCEEEEEEEECSSCEEEEEEEEEEECCCEEEEEEECC--C---CSSEEEEEEEEEESCCTTCEEEEEETTEEEESSS--
T ss_pred ccCceEEEEEEecCCCeEEEEEEEEEccCCCCeEecCc--eeecCCCceEEEEEEEecCCCceEEEEEeCCEEcCCCC--
Confidence 999999999999988777788899987653 33333 2234565 89999999984 589999999998774322
Q ss_pred EEEEeCCeEEEEEcccCcc-CceeEEEEEEcCCcceEEEE
Q psy7042 231 KFTVLDDYIIIFIKEIRKE-DAGDYTVNLSNSSGSVSGTF 269 (2245)
Q Consensus 231 ~~~~~~~~~~L~i~~~~~~-d~G~Y~C~a~n~~g~~~~~~ 269 (2245)
.|.|.....+ |+|.|+|.|.|..|..+..+
T Consensus 156 ---------~l~i~~~~~~~d~G~Y~C~a~N~~g~~s~~~ 186 (193)
T 2if7_A 156 ---------NLTVSWDPRISSEQDYTCIAENAVSNLSFSV 186 (193)
T ss_dssp ---------EEEEEECTTTCSCCEEEEEEEETTEEEEEEE
T ss_pred ---------eEEEEeccCcCCCCcEEEEEECCCCcccccc
Confidence 3566544444 89999999999999876543
No 248
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.71 E-value=3.2e-17 Score=182.54 Aligned_cols=171 Identities=14% Similarity=0.148 Sum_probs=118.6
Q ss_pred CCCceeccCCceEEcCCCeEEEEEEecCcCCCeEEEeeCCEeccCCceEEEEecCcEEEEEEeeeccCCCeEEEEEEecC
Q psy7042 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNS 1775 (2245)
Q Consensus 1696 ~~p~~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~ 1775 (2245)
.+|.|...+. ..+.+|++++|.|.+.+.|. .+.|+|++..+....+ ..........|.|.+++.+|+|.|+|.+.|.
T Consensus 4 ~~P~i~~~p~-~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~-~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 80 (196)
T 2d3v_A 4 SKATLWAEPG-SVISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDTQ-NPLEPKNKARFSIPSMTEHHAGRYRCYYYSP 80 (196)
T ss_dssp CBCEEEEESC-SEEETTCCEEEEEECCTTCC-EEEEEETTCSSCSEEE-CCCSSTTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCEEEeCCC-CcccCCCeEEEEEeCCCCCc-EEEEEECCCCCCcccc-cccCCccccEEEeccCChhHCeEEEEEEeCC
Confidence 5677777666 47899999999999988766 8999999987753211 1112345567999999999999999999998
Q ss_pred ceeeE--EEEEEEecC---CCccccCCCceEEcCCCeEEEEEEEeccCCcEEEEEECCEEeecCCceEEEEc--CCeEEE
Q psy7042 1776 VGFAH--TSSRVKIGT---PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVL--DDYIII 1848 (2245)
Q Consensus 1776 ~g~~~--~~~~l~V~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~--~~~~~l 1848 (2245)
.|... ..+.|.|.. +|.+...+ ...+.+|++++|.|.+.+.| +.+.|+|+|..+........... .....|
T Consensus 81 ~g~~~~s~~~~l~V~~~~~~p~i~~~~-~~~v~~G~~v~L~C~~~~~p-~~~~W~k~g~~~~~~~~~~~~~~~~~~~~~L 158 (196)
T 2d3v_A 81 AGWSEPSDPLELVVTGFYNKPTLSALP-SPVVTSGENVTLQCGSRLRF-DRFILTEEGDHKLSWTLDSQLTPSGQFQALF 158 (196)
T ss_dssp TEECBCCCCEEEEEECSSCCCEEEC------------CEEEEEESSCC-SEEEEEEC---CCEEEEECEECTTSCEEEEE
T ss_pred CCcCCcCccEEEEecCCCCCCeEEccC-CccccCCCcEEEEEEcCCCC-CEEEEEccCCcccccccccccccCCCceeEE
Confidence 77433 456777766 46665443 35788999999999999998 89999999987743211101111 123689
Q ss_pred EEcccCcccceEEEEEEEcCCee
Q psy7042 1849 FIKEIRKEDAGDYTVNLSNSSGS 1871 (2245)
Q Consensus 1849 ~i~~~~~~d~G~Y~C~a~n~~g~ 1871 (2245)
.|.++..+|+|.|+|.|.|..+.
T Consensus 159 ~I~~v~~~D~G~Y~C~a~n~~~~ 181 (196)
T 2d3v_A 159 PVGPVTPSHRWMLRCYGSRRHIL 181 (196)
T ss_dssp ECCCCBTTBCEEEEEEEEETTEE
T ss_pred EeeecCcccCeeEEEEEEccCCC
Confidence 99999999999999999998653
No 249
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.71 E-value=9.3e-17 Score=186.19 Aligned_cols=177 Identities=12% Similarity=0.179 Sum_probs=133.9
Q ss_pred CCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECC--ee------------ccCCCeEEEEEcCcEEEEEEeeecc
Q psy7042 90 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNG--RE------------ISSGARYRVETAGGVFRLHFNEVTD 155 (2245)
Q Consensus 90 ~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g--~~------------l~~~~~~~~~~~~~~~~L~i~~~~~ 155 (2245)
.+.+...|..+.+.+|++++|.|.+.+.|.+.|.|+|++ .. .....|+.+...++..+|.|.+++.
T Consensus 24 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 103 (237)
T 3sob_L 24 DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQP 103 (237)
T ss_dssp CCCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred cceEEeCCCeEEEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCCh
Confidence 556777788899999999999999999888999999832 11 1124578887777788899999999
Q ss_pred CCCeEEEEEEEcCcccce-eEEEEEe---cCCCeeecCCCceEEcCCCeEEEEEEEec-CC-CceEEEeeCceeeecCC-
Q psy7042 156 VDNGDYTCEAYNSVGFAH-TSSRVKI---GTPPRIDRMPNALYIPEGDNTKVKIFYAG-DQ-PMEVSLTKNGRVVQSDD- 228 (2245)
Q Consensus 156 ~d~G~Y~C~a~n~~g~~~-~~~~l~V---~~~P~~~~~~~~~~v~~G~~~~l~C~~~g-~p-~~~i~W~~~g~~l~~~~- 228 (2245)
+|+|.|+|.|.|..+... ..+.|.| ..+|.+...+....+.+|+.++|.|.+.| .| .+.|+|+|+|..+..+.
T Consensus 104 ~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~~~~~~~ 183 (237)
T 3sob_L 104 EDFATYYCQQSYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQ 183 (237)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEEECCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEE
T ss_pred hhCeEEEEeeccCCceEEcCcEEEEEecCCCCCceEEeCCChhhccCCceEEEEEEcccCCCceEEEEEECCCCCCCcee
Confidence 999999999998776322 3446666 45677766665555667999999999987 55 58999999999886431
Q ss_pred -ceEEEEe--C---CeEEEEEcccCccCceeEEEEEEcCCcceE
Q psy7042 229 -RFKFTVL--D---DYIIIFIKEIRKEDAGDYTVNLSNSSGSVS 266 (2245)
Q Consensus 229 -~~~~~~~--~---~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 266 (2245)
....... + ....|.|.....+|+|.|+|.|.|......
T Consensus 184 ~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~ 227 (237)
T 3sob_L 184 ESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSP 227 (237)
T ss_dssp EEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSC
T ss_pred ecccccccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCCCc
Confidence 0000000 1 124688999999999999999999875443
No 250
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.70 E-value=3.6e-17 Score=185.93 Aligned_cols=170 Identities=12% Similarity=0.166 Sum_probs=124.1
Q ss_pred CcceEEeCCCeEEEEEEE-eeec-CCceEEEECC--eec------------cCCCeEEEEEcCcEEEEEEeeeccCCCeE
Q psy7042 97 LKDLVVPLGKLLTLQCEA-TGTP-VPKCRWLRNG--REI------------SSGARYRVETAGGVFRLHFNEVTDVDNGD 160 (2245)
Q Consensus 97 ~~~~~v~~G~~v~L~C~~-~g~p-~~~i~W~~~g--~~l------------~~~~~~~~~~~~~~~~L~i~~~~~~d~G~ 160 (2245)
|..+.+.+|++++|.|.+ .+.+ .+.|.|+|++ ..+ ....|+.+...++..+|.|.+++.+|+|.
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 86 (216)
T 2xzc_L 7 PPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEAD 86 (216)
T ss_dssp CSEEEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEE
T ss_pred CCcEEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccCEE
Confidence 567889999999999995 4443 5789999953 221 11347877777777889999999999999
Q ss_pred EEEEEEcCcc--cceeEEEEEec---CCCeeecCCCceEEcCCCeEEEEEEEec-CCCc-eEEEeeCceeeecCCceE--
Q psy7042 161 YTCEAYNSVG--FAHTSSRVKIG---TPPRIDRMPNALYIPEGDNTKVKIFYAG-DQPM-EVSLTKNGRVVQSDDRFK-- 231 (2245)
Q Consensus 161 Y~C~a~n~~g--~~~~~~~l~V~---~~P~~~~~~~~~~v~~G~~~~l~C~~~g-~p~~-~i~W~~~g~~l~~~~~~~-- 231 (2245)
|+|.|.|..+ .....+.|.|. .+|.+...+......+|+.++|.|.+.| .|++ .|+|+|+|..+..+....
T Consensus 87 Y~C~~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~ 166 (216)
T 2xzc_L 87 YYCGTWDSSLNPVFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVT 166 (216)
T ss_dssp EEEEEECTTSCEEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEEC
T ss_pred EEEEEEeCCCcceECCCEEEEEcCCCCCCceEEeCCChhhccCCcEEEEEEEEeEcCCceEEEEEECCeecCCCeeEecC
Confidence 9999999876 22234567776 4677665443333446999999999988 5554 899999999886541111
Q ss_pred EEEe-CC----eEEEEEcccCccCceeEEEEEEcCCcceE
Q psy7042 232 FTVL-DD----YIIIFIKEIRKEDAGDYTVNLSNSSGSVS 266 (2245)
Q Consensus 232 ~~~~-~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 266 (2245)
.... ++ .+.|.|..+..+|+|.|+|.|.|......
T Consensus 167 ~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~ 206 (216)
T 2xzc_L 167 EQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSP 206 (216)
T ss_dssp CCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSC
T ss_pred cccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCCCc
Confidence 1111 11 23799999999999999999999875543
No 251
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.70 E-value=3.9e-17 Score=187.70 Aligned_cols=184 Identities=14% Similarity=0.112 Sum_probs=133.1
Q ss_pred CCCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECCeeccCCCeEE-EEEcCcEEEEEEeeeccCCCeEEEEEEEc
Q psy7042 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYR-VETAGGVFRLHFNEVTDVDNGDYTCEAYN 167 (2245)
Q Consensus 89 ~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~~~~~-~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 167 (2245)
.+|.|...|. ..+.+|++|+|.|.+.+ +.+.|.|+|+|..+....... .........|.|.+++.+|+|.|+|.|.|
T Consensus 6 ~kP~i~~~P~-~~V~~G~~VtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~ 83 (257)
T 1b6u_A 6 RKPSLLAHPG-PLVKSEETVILQCWSDV-RFQHFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGSV 83 (257)
T ss_dssp CCCEECCBSC-SEEESSCCEEEEEEESS-CCSEEEEEEESTTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEEEEEEEC
T ss_pred CCCEEEEcCC-CEecCCCCEEEEEecCC-CCcEEEEEECCCCCCcceeeeeccCCCceEEEEeecCCcccCEEEEEeEec
Confidence 5888888886 67899999999999974 567899999997654211100 00112345799999999999999999986
Q ss_pred Ccc-----cceeEEEEEecC---CCeeecCCCceEEcCCCeEEEEEEEecCCCceEEEeeCceeeecCCceEEEE-eCCe
Q psy7042 168 SVG-----FAHTSSRVKIGT---PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTV-LDDY 238 (2245)
Q Consensus 168 ~~g-----~~~~~~~l~V~~---~P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~-~~~~ 238 (2245)
..+ ..+..+.|.|.. +|.+...|. ..+.+|++++|.|.+.+.| +.|.|+|+|..+.......... ....
T Consensus 84 ~~~~~~~s~~S~~~~L~V~~~~~~P~l~~~p~-~~V~~G~~vtL~C~~~~~~-~~~~w~k~g~~~~~~~~~~~~~~~~~~ 161 (257)
T 1b6u_A 84 THSPYQLSAPSDPLDIVITGLYEKPSLSAQPG-PTVLAGESVTLSCSSRSSY-DMYHLSREGEAHERRFSAGPKVNGTFQ 161 (257)
T ss_dssp SSCTTSCCCCCCCEEEEEECSSCCCEEECSSC-TTCBTTCEEEEEEECSSCC-SEEEEEETTSSCEECCBCBCCSSSCCB
T ss_pred cCCCccccccCCCEEEecccCCCCcceEccCC-CccCCCCEEEEEEeCCCCC-cEEEEEECCcccCcccccccccCCcee
Confidence 532 223456777764 467776665 4688999999999988754 6899999998876543211111 1235
Q ss_pred EEEEEcccCccCceeEEEEEEcCCc-----ceEEEEEEEEecCCC
Q psy7042 239 IIIFIKEIRKEDAGDYTVNLSNSSG-----SVSGTFTINITGLPG 278 (2245)
Q Consensus 239 ~~L~i~~~~~~d~G~Y~C~a~n~~g-----~~~~~~~l~V~~~p~ 278 (2245)
..|.|.+++ |+|.|+|.|.|..+ ..+..+.|.|.+.|.
T Consensus 162 ~~l~I~~v~--D~G~Y~C~a~~~~~p~~~s~~S~pl~L~V~g~p~ 204 (257)
T 1b6u_A 162 ADFPLGPAT--HGGTYRCFGSFRDSPYEWSNSSDPLLVSVTGNPS 204 (257)
T ss_dssp EEEEEEECC--SCEEEEEEEECSSCTTBBCCCCCCEEECCBCCC-
T ss_pred EEEEecccc--cCEEEEEEEEcCCCCcccccCCCCEEEEEeccCC
Confidence 689999998 99999999997632 345678888887754
No 252
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.70 E-value=1.8e-16 Score=187.94 Aligned_cols=183 Identities=16% Similarity=0.221 Sum_probs=136.7
Q ss_pred eecCCcceEEeCCCeEEEEEEEeeec--CCceEEEECC--eecc-----------------CCCeEEEEEc--CcEEEEE
Q psy7042 93 FIVPLKDLVVPLGKLLTLQCEATGTP--VPKCRWLRNG--REIS-----------------SGARYRVETA--GGVFRLH 149 (2245)
Q Consensus 93 ~~~~~~~~~v~~G~~v~L~C~~~g~p--~~~i~W~~~g--~~l~-----------------~~~~~~~~~~--~~~~~L~ 149 (2245)
+...|..+.+.+|++|+|.|.+.+.| .+.|.|+|++ ..+. ..+|+.+..+ ++..+|.
T Consensus 29 ~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 108 (282)
T 1qok_A 29 KLQQSGAELVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQ 108 (282)
T ss_dssp EEEECCCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEE
T ss_pred EEECCCCEEEeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEE
Confidence 34456678999999999999998875 6789999953 2110 1357777653 4567899
Q ss_pred EeeeccCCCeEEEEEEEcCccc---c--eeEEEEEecCCC---------------eeecCCCceEEcCCCeEEEEEEEec
Q psy7042 150 FNEVTDVDNGDYTCEAYNSVGF---A--HTSSRVKIGTPP---------------RIDRMPNALYIPEGDNTKVKIFYAG 209 (2245)
Q Consensus 150 i~~~~~~d~G~Y~C~a~n~~g~---~--~~~~~l~V~~~P---------------~~~~~~~~~~v~~G~~~~l~C~~~g 209 (2245)
|.+++.+|+|.|.|.|.|..|. . ...+.|.|..+| .+...|..+.+.+|++++|.|.+.+
T Consensus 109 I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~ 188 (282)
T 1qok_A 109 LSSLTSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGEKVTITCSASS 188 (282)
T ss_dssp ECSCCGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECSEEEECTTCCEEEEEEESS
T ss_pred ECcCChhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCCEEEEcCCCcEEEEEEecC
Confidence 9999999999999999998762 1 124568887643 4556677888999999999999999
Q ss_pred CCCceEEEee--Cceeee------------cCCceEEEEeCCeEEEEEcccCccCceeEEEEEEcCCcc-eEEEEEEEEe
Q psy7042 210 DQPMEVSLTK--NGRVVQ------------SDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGS-VSGTFTINIT 274 (2245)
Q Consensus 210 ~p~~~i~W~~--~g~~l~------------~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~V~ 274 (2245)
.| +.+.||| +|..+. ...++.+...+...+|.|.++..+|+|.|+|.|.|..+. ......|.|.
T Consensus 189 ~~-~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~ 267 (282)
T 1qok_A 189 SV-SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSSYPLTFGAGTKLELK 267 (282)
T ss_dssp CC-SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred CC-ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhHCEEEEEEEeeCCCceEeCCEEEEEe
Confidence 98 8999999 665442 134566555566778999999999999999999986432 3445677776
Q ss_pred cC
Q psy7042 275 GL 276 (2245)
Q Consensus 275 ~~ 276 (2245)
..
T Consensus 268 ~~ 269 (282)
T 1qok_A 268 RA 269 (282)
T ss_dssp --
T ss_pred cc
Confidence 53
No 253
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.70 E-value=1.9e-16 Score=184.84 Aligned_cols=186 Identities=13% Similarity=0.199 Sum_probs=136.6
Q ss_pred CCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECC--eec-------------cCCCeEEEE--EcCcEEEEEEee
Q psy7042 90 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNG--REI-------------SSGARYRVE--TAGGVFRLHFNE 152 (2245)
Q Consensus 90 ~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g--~~l-------------~~~~~~~~~--~~~~~~~L~i~~ 152 (2245)
+..++..|..+.+.+|++|+|.|.+.+.|.+.|.|+|.. ..+ ....|+.+. ...+..+|.|.+
T Consensus 3 ~~~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~ 82 (256)
T 3tf7_C 3 AQSVTQPDARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKAS 82 (256)
T ss_dssp -CEEECSCSEEEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESS
T ss_pred ccEEEecCceEEecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECC
Confidence 456777888899999999999999999999999999832 111 113355553 345667899999
Q ss_pred eccCCCeEEEEEEEcCcccc----eeEEEEEecC--------------------CCeeecCCCceEEcCCCeEEEEEEEe
Q psy7042 153 VTDVDNGDYTCEAYNSVGFA----HTSSRVKIGT--------------------PPRIDRMPNALYIPEGDNTKVKIFYA 208 (2245)
Q Consensus 153 ~~~~d~G~Y~C~a~n~~g~~----~~~~~l~V~~--------------------~P~~~~~~~~~~v~~G~~~~l~C~~~ 208 (2245)
++.+|+|.|.|.|.|..+.. ...+.|.|.. +|.+...|....+.+|+.++|.|.+.
T Consensus 83 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~ 162 (256)
T 3tf7_C 83 VHRSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSPRNKVTVTGENVTLSCRQT 162 (256)
T ss_dssp CCGGGCSEEEEEEECTTCTTCEEECCCEEEEEEC---------------------CCEEESCSEEEEETTCCEEECEEEC
T ss_pred CCcccCEEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecCCEEEEeCCCcEEEEEEcC
Confidence 99999999999999976522 2245677765 66788888999999999999999998
Q ss_pred cCCCceEEEeeCc--ee---ee------------cCCceEEEE-eCCeEEEEEcccCccCceeEEEEEEcCCcceE--EE
Q psy7042 209 GDQPMEVSLTKNG--RV---VQ------------SDDRFKFTV-LDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVS--GT 268 (2245)
Q Consensus 209 g~p~~~i~W~~~g--~~---l~------------~~~~~~~~~-~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~--~~ 268 (2245)
+. .+.+.|||.. .. +. ...++.+.. .....+|.|.++..+|+|.|+|.|.|..|... .-
T Consensus 163 ~~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~~~fG~g 241 (256)
T 3tf7_C 163 NS-HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQTSLYFCASSDAPGQLYFGEG 241 (256)
T ss_dssp SC-CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEEEETTEEEECCC
T ss_pred CC-ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHCEEEEEEecCCCCccEECCC
Confidence 86 6799999832 11 11 122333332 23455899999999999999999999876542 24
Q ss_pred EEEEEecC
Q psy7042 269 FTINITGL 276 (2245)
Q Consensus 269 ~~l~V~~~ 276 (2245)
..|.|...
T Consensus 242 t~l~v~~~ 249 (256)
T 3tf7_C 242 SKLTVLEL 249 (256)
T ss_dssp EEEEEECG
T ss_pred eEEEEEcc
Confidence 45666643
No 254
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.70 E-value=7.4e-17 Score=155.85 Aligned_cols=96 Identities=27% Similarity=0.539 Sum_probs=90.5
Q ss_pred CCceEEeeccceeeecCccEEEEEEEEeeCCCeEEEeeCCEeeCCCCcEEEEEeCcEEEEEEcCCCCCCCeEEEEEEEeC
Q psy7042 2086 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNK 2165 (2245)
Q Consensus 2086 ~~p~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~ 2165 (2245)
.||.|...+.++.+.+|+.++|.|.+.|.|.|.|+|+|||..|..+.++.+..++....|.|.++..+|+|.|+|.|.|.
T Consensus 12 ~pP~f~~~p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 91 (107)
T 3knb_B 12 SPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNA 91 (107)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCEEEeCCCcEEEeCCCcEEEEEEEEEecCCEEEEEECcccccceeeEEEeecCceEEEEEecCChhhCEEEEEEEEEC
Confidence 47999999999999999999999999999999999999999999999999999998899999999999999999999999
Q ss_pred CceeeEEEEEEEEcCC
Q psy7042 2166 GGVKSTKAELIIMTAP 2181 (2245)
Q Consensus 2166 ~G~~~~~~~l~V~~~p 2181 (2245)
+|..++++.|.|..+|
T Consensus 92 ~G~~~~~~~l~V~~pP 107 (107)
T 3knb_B 92 AGEAYAAAAVTVLEPP 107 (107)
T ss_dssp TEEEEEEEEEEEEC--
T ss_pred CCEEEEEEEEEEEcCC
Confidence 9999999999998765
No 255
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.70 E-value=5.8e-17 Score=178.64 Aligned_cols=163 Identities=12% Similarity=0.178 Sum_probs=128.8
Q ss_pred ceEEcCCCeEEEEEEecCcCCCeEEEeeCCEe--ccC------------CceEEEEe---cCcEEEEEEeeeccCCCeEE
Q psy7042 1706 DLVVPLGKLLTLQCEATGTPVPKCRWLRNGRE--ISS------------GARYRVET---AGGVFRLHFNEVTDVDNGDY 1768 (2245)
Q Consensus 1706 ~~~~~~G~~v~L~C~~~~~p~~~v~W~~~~~~--l~~------------~~~~~~~~---~~~~~~L~i~~v~~~d~G~Y 1768 (2245)
.+.+.+|++++|.|.+.+.|.+.+.|++++.. +.. ..++.+.. .++..+|.|.+++.+|+|.|
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y 83 (184)
T 2ny1_B 4 VVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTY 83 (184)
T ss_dssp EEEEETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEE
T ss_pred cEEEeCCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEEE
Confidence 36789999999999999999999999999863 210 22333332 33456699999999999999
Q ss_pred EEEEecCceeeEEEEEEEecCCCccccCCCceEEcCCCeEEEEEEEeccCCcEEEEEECCEEeecCCceEEEEcCCeEEE
Q psy7042 1769 TCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIII 1848 (2245)
Q Consensus 1769 ~C~~~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~l 1848 (2245)
+|.+.|..+ .+.|.|...+ .+....+.+|+++.|.|.+.+.|.+.+.|++++..+.. ....|
T Consensus 84 ~C~~~~~~~----~~~l~V~~~~----~~~~~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~~~----------~~~~L 145 (184)
T 2ny1_B 84 ICEVEDQKE----EVQLLVFGLT----ANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQ----------GGKTL 145 (184)
T ss_dssp EEEETTEEE----EEEEEEEEEE----ESSCSEEETTCCEEEEEECCTTCCCEEEEECTTSCEEE----------ESSEE
T ss_pred EEEEEcCCC----cEEEEEEEec----CCCCceeecCCCEEEEEEcCCCCCCEEEEEeCCCcccc----------CceEE
Confidence 999998765 3445554311 23445789999999999999999999999999865521 22379
Q ss_pred EEcccCcccceEEEEEEEcCCeeeEEEEEEEEeCCCCC
Q psy7042 1849 FIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGP 1886 (2245)
Q Consensus 1849 ~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~ 1886 (2245)
.|.++..+|+|.|+|.|.|..|..+..+.|.|.+.|.+
T Consensus 146 ~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~p~~ 183 (184)
T 2ny1_B 146 SVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKA 183 (184)
T ss_dssp EESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCC-
T ss_pred EEecCCcCCCeEEEEEEEECCceEEEEEEEEEEecCCC
Confidence 99999999999999999999999999999999988764
No 256
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.70 E-value=1.5e-17 Score=190.45 Aligned_cols=179 Identities=17% Similarity=0.226 Sum_probs=129.0
Q ss_pred ceEEeCCCeEEEEEEEeeecC-----CceEEEECCeec-------------cCCCeEEEEEc---CcEEEEEEeeeccCC
Q psy7042 99 DLVVPLGKLLTLQCEATGTPV-----PKCRWLRNGREI-------------SSGARYRVETA---GGVFRLHFNEVTDVD 157 (2245)
Q Consensus 99 ~~~v~~G~~v~L~C~~~g~p~-----~~i~W~~~g~~l-------------~~~~~~~~~~~---~~~~~L~i~~~~~~d 157 (2245)
.+.+.+|++++|.|.+.+.|. +.|.|+|++... ....|+.+... .+..+|.|.+++.+|
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~D 83 (222)
T 4i0k_A 4 PVVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVTD 83 (222)
T ss_dssp CCCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGGG
T ss_pred CEEEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCccccc
Confidence 356789999999999988764 679999987443 11234443321 123469999999999
Q ss_pred CeEEEEEEEcCcccceeEEEEEecCC---CeeecCCCceEEcCCCeEEEEEEE-ecCCCceEEEee-CceeeecCCceEE
Q psy7042 158 NGDYTCEAYNSVGFAHTSSRVKIGTP---PRIDRMPNALYIPEGDNTKVKIFY-AGDQPMEVSLTK-NGRVVQSDDRFKF 232 (2245)
Q Consensus 158 ~G~Y~C~a~n~~g~~~~~~~l~V~~~---P~~~~~~~~~~v~~G~~~~l~C~~-~g~p~~~i~W~~-~g~~l~~~~~~~~ 232 (2245)
+|.|+|.|.|. +..+..+.|.|..+ |.+...+ ...+.+|+.++|.|.+ .|.|.+.+.|++ ++..+........
T Consensus 84 ~G~Y~C~~~~~-~~~~~~~~l~V~~~~~~p~i~~~~-~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~~~~~~~ 161 (222)
T 4i0k_A 84 EGSYTCFVSIQ-DFDSAAVSLQVAAPYSKPSMTLEP-NKDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGNVTTSQ 161 (222)
T ss_dssp CSCEEEEEEEC-CCCCCCCCCCCCBCCCCCEEECCC------CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCSEEEEEE
T ss_pred CEEEEEEEEeC-CCceEEEEEEEEcCCCCCcEEeCC-CceecCCceEEEEEecccccCCCeEEEEcCCCccCCCCcceeE
Confidence 99999999986 44556667777765 5565554 3467899999999999 789999999999 5665543322222
Q ss_pred EEe--CCeEEEEEcccCccCceeEEEEEEcCCcceEEEEEEEEecCCCC
Q psy7042 233 TVL--DDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGP 279 (2245)
Q Consensus 233 ~~~--~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~ 279 (2245)
... +....|.|.++..+|+|.|+|.|.|..|....++.|.|.++|..
T Consensus 162 ~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~ 210 (222)
T 4i0k_A 162 MANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITGQPLT 210 (222)
T ss_dssp EECTTSCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCC----
T ss_pred EcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEEEEEEeCCccc
Confidence 222 22346889999999999999999999999999999999987754
No 257
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.70 E-value=8.6e-17 Score=181.80 Aligned_cols=180 Identities=13% Similarity=0.086 Sum_probs=126.7
Q ss_pred cccccccccc--cceeeEEEEeccCcCeEEEEeC---CeecCCCccEEEEeeCCeEEEEEecccccCCceEEEEEEeCCC
Q psy7042 486 PLRNANAIQN--HNAQFQCTITGCPKPTISWLKG---SREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGG 560 (2245)
Q Consensus 486 ~~~~~~~~~g--~~~~l~C~~~g~p~~~v~W~~~---~~~i~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g 560 (2245)
.+..+.+.+| +++.|.|.+.+ |.+.+.|++. +..+....++.....+ .|.|.+++.+|+|.|+|.|.|..+
T Consensus 13 ~p~~v~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~~~~~~~~~~~---~l~I~~v~~~D~G~Y~C~a~n~~~ 88 (213)
T 2x1w_L 13 QHGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGNRISWDSKK---GFTIPSYMISYAGMVFCEAKINDE 88 (213)
T ss_dssp -CEEEEECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECCCSSSCEEETTT---EEEEEGGGTTTCSEEEEEEC----
T ss_pred CceEEEEecCCCccEEEeeccCC-CCcEEEEEhhcCCCccccCCCcccccCCc---cEEEccCChhcCceEEEEEEECCe
Confidence 3467889999 99999999987 7799999884 6666555444433333 699999999999999999999544
Q ss_pred CCCc-ceeEeEec--CCCCCCCCCcccceEeeCCCeEEEEEeeeecCC--CeEEEEeCCeEeeccCe-EEEEe-------
Q psy7042 561 VKST-KAELIIMT--APKFNVPPRFRDTAYFDKGENVVVKIPFTGYPK--PKITWYRDNEVIESGGH-FHVET------- 627 (2245)
Q Consensus 561 ~~~~-~~~l~v~~--~p~~~~~p~~~~~~~~~~g~~~~l~C~~~g~p~--~~i~W~~~~~~~~~~~~-~~~~~------- 627 (2245)
...+ .+.|.|.. +|.+...+. ....+.+|+.++|.|.+.|.|. +.++|++++..+..... .....
T Consensus 89 ~~~s~~~~l~v~~~~~p~~~~~~~--~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~ 166 (213)
T 2x1w_L 89 SYQSIMYIVVVVGYRIYDVVLSPS--HGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEM 166 (213)
T ss_dssp CEECCCEEEEECBCCEEEEEEESC--SCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSCSC
T ss_pred eEEEEEEEEEEeCCcccceEEcCC--CCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEEEeccccccccCccc
Confidence 4333 25666643 122211111 2346889999999999998654 57999999876432211 10100
Q ss_pred cCCeEEEEEcCCCCCcCEEEEEEEEeCCCCceeEEEEEeeCCCC
Q psy7042 628 SERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPD 671 (2245)
Q Consensus 628 ~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~P~ 671 (2245)
......|.|.+++.+|+|.|+|.|.|..|..+..+.|.|.++|.
T Consensus 167 ~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~ 210 (213)
T 2x1w_L 167 KKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEDPI 210 (213)
T ss_dssp EEEEEEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC---
T ss_pred eeeeEEEEECCCCcccCEEEEEEEecCCCcEEEEEEEEEecccc
Confidence 11245799999999999999999999999999999999987764
No 258
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.70 E-value=1.1e-16 Score=181.55 Aligned_cols=178 Identities=12% Similarity=0.246 Sum_probs=135.3
Q ss_pred ceeccCCceEEcCCCeEEEEEEecCcCCCeEEEeeC--CEec------------cCCceEEEEecCcEEEEEEeeeccCC
Q psy7042 1699 DFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRN--GREI------------SSGARYRVETAGGVFRLHFNEVTDVD 1764 (2245)
Q Consensus 1699 ~~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~--~~~l------------~~~~~~~~~~~~~~~~L~i~~v~~~d 1764 (2245)
.+..++ .+.+.+|++++|.|.+.+.|.+.+.|+|. +..+ ....|+.+....+..+|.|.+++.+|
T Consensus 3 ~v~~~~-~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 81 (213)
T 3mj8_L 3 TLTQPP-LVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAGD 81 (213)
T ss_dssp CBBCCS-EEEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGG
T ss_pred eEEeCC-cEEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChhh
Confidence 455556 78899999999999999999999999982 2211 02357777667788899999999999
Q ss_pred CeEEEEEEecCce---eeEEEEEEEec----CCCccccCCCceEEcCCCeEEEEEEEecc-CC-cEEEEEECCEEeecCC
Q psy7042 1765 NGDYTCEAYNSVG---FAHTSSRVKIG----TPPRIDRMPNALYIPEGDNTKVKIFYAGD-QP-MEVSLTKNGRVVQSDD 1835 (2245)
Q Consensus 1765 ~G~Y~C~~~n~~g---~~~~~~~l~V~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~v~W~~~g~~l~~~~ 1835 (2245)
+|.|+|.+.|..+ .......|.|. .+|.+...+....+.+|+.++|.|.+.|. |+ +.+.|+|+|..+....
T Consensus 82 ~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~ 161 (213)
T 3mj8_L 82 EADYYCQSWDGTNSAWVFGSGTKVTVLGQPNAAPSVTLFPPSSEELKTNQATLVCMINGFYPADVAVTWEADGTPITQGV 161 (213)
T ss_dssp CEEEEEEEEETTTTEEEEBCCEEEEEECSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTE
T ss_pred CEEEEEEeccCCcceeEEcCceEEEEeCCCCCCCeEEccCCCcccccCCcEEEEEEeeceeCCCeEEEEEcCCcccCCCc
Confidence 9999999999877 34455778887 67777666655556689999999999986 44 4999999999885431
Q ss_pred ce--EEEEcC---CeEEEEEcccCcccceEEEEEEEcCCeeeEEEEE
Q psy7042 1836 RF--KFTVLD---DYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFT 1877 (2245)
Q Consensus 1836 ~~--~~~~~~---~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 1877 (2245)
.. .....+ ....|.|.++..+|.|.|+|.|.|..+....++.
T Consensus 162 ~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~ 208 (213)
T 3mj8_L 162 KTTQPSKSDSKYMATSYLTMTADAWKSRNTFICKVTHGGNTVEKSLS 208 (213)
T ss_dssp EECCCEEETTEEEEEEEEEEESHHHHSCSCEEEEEEETTEEEEEEEC
T ss_pred ccCCcCccCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCccEEeeec
Confidence 10 000111 1245899999999999999999999987666543
No 259
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.70 E-value=7e-17 Score=184.01 Aligned_cols=175 Identities=11% Similarity=0.138 Sum_probs=123.5
Q ss_pred CCcceEEeCCCeEEEEEEEeeec--CCceEEEEC--Ceecc-----------------CCCeEEEEEc--CcEEEEEEee
Q psy7042 96 PLKDLVVPLGKLLTLQCEATGTP--VPKCRWLRN--GREIS-----------------SGARYRVETA--GGVFRLHFNE 152 (2245)
Q Consensus 96 ~~~~~~v~~G~~v~L~C~~~g~p--~~~i~W~~~--g~~l~-----------------~~~~~~~~~~--~~~~~L~i~~ 152 (2245)
.|..+.+.+|++++|.|.+.|.| .+.|.|+|+ |..+. ...|+.+..+ ++..+|.|.+
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (219)
T 1c1e_H 6 QSGPELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINN 85 (219)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECS
T ss_pred CCCCeEecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECC
Confidence 34557889999999999999865 678999996 43221 1347776653 3456899999
Q ss_pred eccCCCeEEEEEEEcCccc----ceeEEEEEecCC----CeeecCCCceEEcCCCeEEEEEEEec-CCCc-eEEEeeCce
Q psy7042 153 VTDVDNGDYTCEAYNSVGF----AHTSSRVKIGTP----PRIDRMPNALYIPEGDNTKVKIFYAG-DQPM-EVSLTKNGR 222 (2245)
Q Consensus 153 ~~~~d~G~Y~C~a~n~~g~----~~~~~~l~V~~~----P~~~~~~~~~~v~~G~~~~l~C~~~g-~p~~-~i~W~~~g~ 222 (2245)
++.+|+|.|+|.|.|..+. ....+.|.|... |.+...+....+.+|+.++|.|.+.| .|.| .|+|+|+|.
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~ 165 (219)
T 1c1e_H 86 LKNEDMATYFCARGTTIVRAMDYWGQGTSLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSL 165 (219)
T ss_dssp CCGGGCEEEEEEEEETTTTEEEEECCCEEEEECCCCCBCCEEEEECCCSSSCCSSEEEEEEEEEEEBSSCCEEEEGGGTB
T ss_pred CCcccCEEEEEEEeccCcccceeecCceEEEEecCCCCCCeEEEecCccccccCCeEEEEEEcccccCCCeEEEEEeCCc
Confidence 9999999999999997632 223567888763 66654444445678999999999998 8988 999999998
Q ss_pred eeecCCceEEEEeC---CeEEEEEcccCccCceeEEEEEEcCCcceEEEEEE
Q psy7042 223 VVQSDDRFKFTVLD---DYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTI 271 (2245)
Q Consensus 223 ~l~~~~~~~~~~~~---~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 271 (2245)
.+.......+...+ ..+.|.|..... |.|.|+|.|.|..|.......|
T Consensus 166 ~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-d~g~Y~C~a~n~~~~~~~~~~i 216 (219)
T 1c1e_H 166 SSGVHTFPAVLQSDLYTLSSSVTVPSSPR-PSETVTCNVAHPASSTKVDKKI 216 (219)
T ss_dssp CTTEEECCCEESSSCEEEEEEEEEESSST-TTSCCEEEEEEGGGTEEEEEEC
T ss_pred ccceEecCCcccCCeEEEEEEEEEecccC-CCCEEEEEEEeCCCCccEEEec
Confidence 64211000001111 123688854444 6699999999998876555444
No 260
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=99.70 E-value=2e-16 Score=181.59 Aligned_cols=219 Identities=20% Similarity=0.250 Sum_probs=153.5
Q ss_pred CCCCCCCCCeeeeecCCcEEEEeeCCCCCCCcccccEEEEeeeCCCCCe-EEEceeeeeeEEEecCCCCCEEEEEEEEEe
Q psy7042 668 DRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSW-IRVGNTRFTTMAITGLSPGHQYEFRVYAEN 746 (2245)
Q Consensus 668 ~~P~~p~~~~~~~~~~~si~lsW~~p~~~~~~~~~~y~v~~~~~~~~~w-~~~~~~~~~~~~i~~L~p~t~y~~~v~a~n 746 (2245)
.+|.+|.++.+..++.+++.|+|++| ++.+.+|.|+|+......+ .........++.+.+|.|++.|.|+|.|.|
T Consensus 4 ~p~~~P~~l~~~~~~~~si~l~W~~p----~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n 79 (234)
T 3f7q_A 4 MDLGAPQNPNAKAAGSRKIHFNWLPP----SGKPMGYRVKYWIQGDSESEAHLLDSKVPSVELTNLYPYCDYEMKVCAYG 79 (234)
T ss_dssp -CCCCCEEEEEEECSSSCEEEEEECC----SSCCCEEEEEEEETTSCGGGCEEEEESSSEEEECSCCTTCEEEEEEEEEE
T ss_pred CCCCCCcceEEEEcCCCEEEEEEECC----CCccceEEEEEEECCCCccceEEEcCCccEEEECCCCCCCEEEEEEEEEe
Confidence 57889999999999999999999976 3488999999987544322 222234557899999999999999999999
Q ss_pred cccCCCCCCCCccEEecCccccccccccccccCCCceeecccccccccCCceEEEEeeeccCccccccccceeccccccc
Q psy7042 747 VYGRSDPSTTSDLITTKDTFKKQIKKRQYDFDETGKKIRGKADEKVSDYDQYVFDIYSKYVPQPVDIKTSSVYDHYDILE 826 (2245)
Q Consensus 747 ~~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 826 (2245)
..|.+..+....+.
T Consensus 80 ~~G~g~~s~~~~~~------------------------------------------------------------------ 93 (234)
T 3f7q_A 80 AQGEGPYSSLVSCR------------------------------------------------------------------ 93 (234)
T ss_dssp TTEECCCCCCEEEE------------------------------------------------------------------
T ss_pred CCCcCCCCCeEEEE------------------------------------------------------------------
Confidence 99988766432211
Q ss_pred ccccCceeEEEEeeecccCCeeEEEeeccCCchhhhhhheeeeeeeccCCCceEeecccccCCcceEEEEEEecCCCCCc
Q psy7042 827 EIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFEVLDRPHPPE 906 (2245)
Q Consensus 827 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~p~ 906 (2245)
+..+.|.+|.
T Consensus 94 ----------------------------------------------------------------------T~~~~P~~P~ 103 (234)
T 3f7q_A 94 ----------------------------------------------------------------------THQEVPSEPG 103 (234)
T ss_dssp ----------------------------------------------------------------------CCCCCCCCCC
T ss_pred ----------------------------------------------------------------------cCCCCCCCCC
Confidence 1224778899
Q ss_pred ccEEeeeeCceEEEEecCCCCCCCCccceEEEeeeecCCCc-----eEEecc-eeeeceEEEecCCCCceeeEEEEEEec
Q psy7042 907 NLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTV-----WTKVSS-YVTTPFVRVRNLAIGSTYEFRVMAENQ 980 (2245)
Q Consensus 907 ~l~~~~~~~~~~~l~W~~p~~~~g~~i~~y~i~~~~~~~~~-----~~~~~~-~~~~~~~~i~~L~p~~~y~~~v~a~n~ 980 (2245)
++.+...+.+++.|+|.+|...+| .+.+|.|+|....... |..+.. ....+.+.|.+|.|++.|.|+|+|.|.
T Consensus 104 ~l~~~~~~~~sv~l~W~~p~~~~g-~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~ 182 (234)
T 3f7q_A 104 RLAFNVVSSTVTQLSWAEPAETNG-EITAYEVCYGLVNDDNRPIGPMKKVLVDNPKNRMLLIENLRESQPYRYTVKARNG 182 (234)
T ss_dssp CCEEEECSSSCEEEECCCCSCCSS-CCCEEEEEEEEBCTTSCBSSCCEECCCSCTTCCEEEEECCCTTCCEEEEEEEEET
T ss_pred ccEEEEecCCEEEEEEcCCCCCCC-ceeEEEEEEEECCCCCCccCcceEEEecCCcceEEEeCCCCCCCeEEEEEEEECC
Confidence 999999999999999999977665 9999999998754432 333333 234578999999999999999999999
Q ss_pred cccCCCccccCcccccCCCCCCCCCCC-CeeEeecCCeEEEEecCCCCCCCCccceEEEEEE
Q psy7042 981 YGLSKPALTIDPIKAKHPFDVPGAPGA-PKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKR 1041 (2245)
Q Consensus 981 ~g~~~~s~~~~~~~~~t~~~~p~~p~~-~~~~~~~~~~v~l~W~~p~~~~~~~i~~y~v~~~ 1041 (2245)
.|.|+++.. .+.+.|....|..|.. ..+..+. ...|..+++|.++.+
T Consensus 183 ~G~g~~S~~--~~~~~T~~~~P~~~P~~~~~~i~~------------~~~g~~~~~~~~~~~ 230 (234)
T 3f7q_A 183 AGWGPEREA--IINLATQPKRPMSIPIIPDIPIVD------------AQSGEDYDSFLMYSD 230 (234)
T ss_dssp TEECCCEEE--EECGGGSCCCCCCCCCCTTCCEEE------------TTC------------
T ss_pred CccCCCcCc--eeEeecCCCCCCCCccccceeeEE------------cccCcchheeeeehh
Confidence 999988631 3566666777764332 2221111 123456788888765
No 261
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.70 E-value=3.2e-16 Score=182.38 Aligned_cols=170 Identities=16% Similarity=0.203 Sum_probs=127.0
Q ss_pred ceecCCcceEEeCCCeEEEEEEEeeec-----CCceEEEECC--ee---cc---------CCCeEEEEEcCcEEEEEEee
Q psy7042 92 DFIVPLKDLVVPLGKLLTLQCEATGTP-----VPKCRWLRNG--RE---IS---------SGARYRVETAGGVFRLHFNE 152 (2245)
Q Consensus 92 ~~~~~~~~~~v~~G~~v~L~C~~~g~p-----~~~i~W~~~g--~~---l~---------~~~~~~~~~~~~~~~L~i~~ 152 (2245)
.++..|..+.+.+|++++|.|.+.+.| .+.|.|+|++ .. +. ...|+.+...++..+|.|.+
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 82 (247)
T 1svz_A 3 LMTQTPLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISR 82 (247)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESS
T ss_pred cEEecCCeEEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECC
Confidence 456677889999999999999999887 6899999842 21 11 14578877777778899999
Q ss_pred eccCCCeEEEEEEEcCcccc-eeEEEEEecCCC-------------eeecCCCceEEcCCCeEEEEEEEecCC--CceEE
Q psy7042 153 VTDVDNGDYTCEAYNSVGFA-HTSSRVKIGTPP-------------RIDRMPNALYIPEGDNTKVKIFYAGDQ--PMEVS 216 (2245)
Q Consensus 153 ~~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~P-------------~~~~~~~~~~v~~G~~~~l~C~~~g~p--~~~i~ 216 (2245)
++.+|+|.|.|.|.|..+.. ...+.|.|..++ .....+....+.+|++++|.|.+.+.| .+.+.
T Consensus 83 v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~ 162 (247)
T 1svz_A 83 VEAEDLGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQSGPELKKPGETVKISCKATNYAFTDYSMH 162 (247)
T ss_dssp CCGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEE
T ss_pred CCHHHCEEEEEEEccCCccEECCCEEEEEECCccccccccccccCceEEeCCCceeecCCCcEEEEEEEcCcccCCcEEE
Confidence 99999999999999986542 234678887653 222333445699999999999999875 57999
Q ss_pred EeeCc--eeee-----------------cCCceEEEE--eCCeEEEEEcccCccCceeEEEEEEcC
Q psy7042 217 LTKNG--RVVQ-----------------SDDRFKFTV--LDDYIIIFIKEIRKEDAGDYTVNLSNS 261 (2245)
Q Consensus 217 W~~~g--~~l~-----------------~~~~~~~~~--~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 261 (2245)
|||++ ..+. ...++.+.. ......|.|.+++.+|+|.|.|.|.|.
T Consensus 163 W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 163 WVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNEDTATYFCVRDRH 228 (247)
T ss_dssp EEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEG
T ss_pred EEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCChhHCEEEEEEEecc
Confidence 99963 2211 134455543 345578999999999999999999985
No 262
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.69 E-value=3.4e-17 Score=182.37 Aligned_cols=154 Identities=14% Similarity=0.156 Sum_probs=110.1
Q ss_pred EeCCCeEEEEEEEeeecCCceEEEECCeeccCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEEcCcccceeEEEEEec
Q psy7042 102 VPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIG 181 (2245)
Q Consensus 102 v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 181 (2245)
+.+|++++|.|.+ |.+.|.|+|||..+... . ....+|.|.+++.+|+|.|+|.|.+.. +..+.|.|.
T Consensus 15 ~~~G~~v~L~C~~---p~~~i~W~k~g~~l~~~-----~--~~~~~L~i~~v~~~DsG~Y~C~~~~~~---s~~~~v~v~ 81 (204)
T 1sy6_A 15 YQEDGSVLLTCDA---EAKNITWFKDGKMIGFL-----T--EDKKKWNLGSNAKDPRGMYQCKGSQNK---SKPLQVYYR 81 (204)
T ss_dssp CCSSSEEEEEECS---CSSEEEEEETTEEEEEE-----E--SSCCCEEEEEGGGCCEEEEEEESSSSC---CCCEEEEEE
T ss_pred ecCCCeEEEEEcC---CCCEEEEEECCEECCCC-----C--CCCCeEEeCCCCcCCCEEEEEEecCCC---CeeEEEEEE
Confidence 3689999999998 77899999999987532 1 112259999999999999999976532 222445544
Q ss_pred ---------------------------C----CCeeecCCCceEEcCCCeEEEEEEEecCCCceEEEeeCceeeecCC-c
Q psy7042 182 ---------------------------T----PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDD-R 229 (2245)
Q Consensus 182 ---------------------------~----~P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~-~ 229 (2245)
. +|.+...|. ....+|+.++|.|. |.|.|.|+|+|+|..+.... .
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~v~~~G~~v~L~C~--g~p~p~i~W~k~~~~l~~~~~~ 158 (204)
T 1sy6_A 82 MGSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTPY-KVSISGTTVILTCP--QYPGSEILWQHNDKNIGGDEDD 158 (204)
T ss_dssp C------------------------------------CCCC-EEEEETTEEEEECS--CCCSSCEEEEETTEEESCCTTC
T ss_pred EeccccccccccccccccccccccccccccccccceecCCc-eeeecCCcEEEEcC--CCCCCceEEEECCEECCCccCC
Confidence 1 223333332 22338999999999 78999999999999986542 2
Q ss_pred eEEEEeCCeEEEEEccc-CccCceeEEEEEEcCCcc-eEEEEEEEE
Q psy7042 230 FKFTVLDDYIIIFIKEI-RKEDAGDYTVNLSNSSGS-VSGTFTINI 273 (2245)
Q Consensus 230 ~~~~~~~~~~~L~i~~~-~~~d~G~Y~C~a~n~~g~-~~~~~~l~V 273 (2245)
..+... ...|.|.++ ..+|+|.|+|.|.|..|. .+....|.|
T Consensus 159 ~~~~~~--~~~L~I~~v~~~~D~G~Y~C~A~N~~g~~~s~~l~l~~ 202 (204)
T 1sy6_A 159 KNIGSD--EDHLSLKEFSELEQSGYYVCYPRGSKPEDANFYLYLRA 202 (204)
T ss_dssp TTEEEE--TTEEEETTCCHHHHCEEEEEEETTSCGGGSSCEEEEEE
T ss_pred ceEecC--CCEEEEeeCCccccCEEEEEEeccCCCCceeEEEEEEE
Confidence 222222 237999999 999999999999999996 355555554
No 263
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.69 E-value=6.5e-17 Score=188.67 Aligned_cols=175 Identities=15% Similarity=0.189 Sum_probs=130.9
Q ss_pred CCceecCCcceEEeCCCeEEEEEEEeeec-----CCceEEEECC--eec------------cCCCeEEEEEcCcEEEEEE
Q psy7042 90 KPDFIVPLKDLVVPLGKLLTLQCEATGTP-----VPKCRWLRNG--REI------------SSGARYRVETAGGVFRLHF 150 (2245)
Q Consensus 90 ~P~~~~~~~~~~v~~G~~v~L~C~~~g~p-----~~~i~W~~~g--~~l------------~~~~~~~~~~~~~~~~L~i 150 (2245)
.+.++..|..+.+.+|++|+|.|.+.+.| .+.|.|+|++ ..+ ...+|+.+...++..+|.|
T Consensus 34 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I 113 (252)
T 3bkj_L 34 DVLMTQTPLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRI 113 (252)
T ss_dssp CCCEEEECSEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEE
T ss_pred ccEEEeCCceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEE
Confidence 45677778889999999999999999887 6899999954 211 1135787777777788999
Q ss_pred eeeccCCCeEEEEEEEcCcccce-eEEEEEecC---CCeeecCCCceEEcCCCeEEEEEEEec-CCCc-eEEEeeCceee
Q psy7042 151 NEVTDVDNGDYTCEAYNSVGFAH-TSSRVKIGT---PPRIDRMPNALYIPEGDNTKVKIFYAG-DQPM-EVSLTKNGRVV 224 (2245)
Q Consensus 151 ~~~~~~d~G~Y~C~a~n~~g~~~-~~~~l~V~~---~P~~~~~~~~~~v~~G~~~~l~C~~~g-~p~~-~i~W~~~g~~l 224 (2245)
.+++.+|+|.|+|.|.|..+... ....|.|.. +|.+...+....+.+|+.++|.|.+.| .|++ .|+|+|+|..+
T Consensus 114 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~ 193 (252)
T 3bkj_L 114 SRVEAEDLGVYYCFQASLVPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSER 193 (252)
T ss_dssp SSCCGGGCEEEEEEECSBSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEEE
T ss_pred CCCCcccCEEEEEEEEcCCccEECCCEEEEEeCCCcCcEEEEeCCChhhcCCCcEEEEEEEeeEeCCCcEEEEEECCeec
Confidence 99999999999999998766432 235677764 577666544444557999999999988 4543 79999999988
Q ss_pred ecCCceE--EEE-eC----CeEEEEEcccCccCceeEEEEEEcCCcc
Q psy7042 225 QSDDRFK--FTV-LD----DYIIIFIKEIRKEDAGDYTVNLSNSSGS 264 (2245)
Q Consensus 225 ~~~~~~~--~~~-~~----~~~~L~i~~~~~~d~G~Y~C~a~n~~g~ 264 (2245)
....... ... .+ ....|.|.++..+|+|.|+|.|.|....
T Consensus 194 ~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 240 (252)
T 3bkj_L 194 QNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 240 (252)
T ss_dssp CSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCS
T ss_pred CCCeeeecCcccCCCCCEEEEEEEEEcchhccCCCeEEEEEEeCCCC
Confidence 6541110 000 11 1246999999999999999999997654
No 264
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.69 E-value=9.8e-18 Score=190.19 Aligned_cols=180 Identities=17% Similarity=0.312 Sum_probs=140.8
Q ss_pred CCceeccCCceEEcCCCeEEEEEEecCcCCCeEEEeeCCEec------------cCCceEEEEecCcEEEEEEeeeccCC
Q psy7042 1697 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREI------------SSGARYRVETAGGVFRLHFNEVTDVD 1764 (2245)
Q Consensus 1697 ~p~~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~~~~l------------~~~~~~~~~~~~~~~~L~i~~v~~~d 1764 (2245)
++.+..++..+.+.+|+++.|.|.+.+.|.+.+.|++++..+ ....++.+.. ..|.|.+++.+|
T Consensus 4 ~~~i~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~----~~L~i~~~~~~d 79 (209)
T 1nbq_A 4 SVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLP----TGITFKSVTRED 79 (209)
T ss_dssp CCEEECSCSBCCEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEET----TEEECSCCCTTS
T ss_pred eEEEEcCCCceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEeec----cEEEEeeCCHHH
Confidence 455666777888999999999999999899999999987652 1123444332 359999999999
Q ss_pred CeEEEEEEecCce--eeEEEEEEEecCCCccccCCCceEEcCCCeEEEEEEE-eccCCcEEEEEECCEEeecCCce----
Q psy7042 1765 NGDYTCEAYNSVG--FAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFY-AGDQPMEVSLTKNGRVVQSDDRF---- 1837 (2245)
Q Consensus 1765 ~G~Y~C~~~n~~g--~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~v~W~~~g~~l~~~~~~---- 1837 (2245)
+|.|+|.+.|..| .....+.|.|..+|.+...+....+.+|+.+.|.|.+ .+.|.+.+.|+++|..+......
T Consensus 80 ~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~ 159 (209)
T 1nbq_A 80 TGTYTCMVSEEGGNSYGEVKVKLIVLVPPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAF 159 (209)
T ss_dssp CSEEEEEEEETTSSCEECCEEECCEEBCCCCCCCCCBSEEETTSCEEECCCCCSCBSCCEEEEEETTCCCCSCSSSSSSC
T ss_pred CcEEEEEEecCCCCccceEEEEEEEecCCcCCCcccccceecCCEEEEEEeCCCCCCCceeEEEECCeeCCCccccceee
Confidence 9999999999865 3445678888888888776767789999999999997 89999999999999987654321
Q ss_pred ---EEEEcCCeEEEEEcccCcccceEEEEEEEcCCeeeE--EEEEEEE
Q psy7042 1838 ---KFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVS--GTFTINI 1880 (2245)
Q Consensus 1838 ---~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~--~~~~l~v 1880 (2245)
..........|.|.++..+|+|.|+|.|.|..|... ..+.|.|
T Consensus 160 ~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~v~l~V 207 (209)
T 1nbq_A 160 SNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPMTSNAVRMEA 207 (209)
T ss_dssp TTCCCCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCCEECCCBCCEE
T ss_pred eccceEEcCCcceEEEEeccccCCeEEEEEEeCCcCcccccccEEEEE
Confidence 111122345799999999999999999999999874 3344444
No 265
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.69 E-value=3.9e-17 Score=193.48 Aligned_cols=184 Identities=18% Similarity=0.213 Sum_probs=128.8
Q ss_pred CCceecCCcceEEeCCCeEEEEEEEe---eecCCceEEEECCeeccCC------------------CeEEEEE--cCcEE
Q psy7042 90 KPDFIVPLKDLVVPLGKLLTLQCEAT---GTPVPKCRWLRNGREISSG------------------ARYRVET--AGGVF 146 (2245)
Q Consensus 90 ~P~~~~~~~~~~v~~G~~v~L~C~~~---g~p~~~i~W~~~g~~l~~~------------------~~~~~~~--~~~~~ 146 (2245)
.+.+..++..+.+.+|+.++|.|.+. +.|.+.|.|+|++...... .|+.+.. ..+..
T Consensus 5 ~~~v~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 84 (268)
T 3mj6_A 5 LPGLTVSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDG 84 (268)
T ss_dssp -------CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBC
T ss_pred ccccccCCCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEE
Confidence 45677778889999999999999997 7788889999966533221 2333321 11224
Q ss_pred EEEEeeeccCCCeEEEEEEEcCccccee--EEEEEecCCCeeecCCCceEEcCCCeEEEEEEE---ecCCCceEEEeeC-
Q psy7042 147 RLHFNEVTDVDNGDYTCEAYNSVGFAHT--SSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFY---AGDQPMEVSLTKN- 220 (2245)
Q Consensus 147 ~L~i~~~~~~d~G~Y~C~a~n~~g~~~~--~~~l~V~~~P~~~~~~~~~~v~~G~~~~l~C~~---~g~p~~~i~W~~~- 220 (2245)
+|.|.+++.+|+|.|+|.|.|..+.... .+.|.|. ...|....+.+|+.++|.|.+ .+.|.+.|.|+|+
T Consensus 85 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~-----~~~p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~ 159 (268)
T 3mj6_A 85 SLLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVL-----PEEPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSS 159 (268)
T ss_dssp CEEECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEE-----CCCCSEEEEETTCCEEECCBCEESSSSCCCEEEEEEEC
T ss_pred EEEECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEe-----ccCCCccccccCCcEEEEEEecCCCCCCccceEEEecC
Confidence 6999999999999999999987665544 4455554 234567889999999999999 6779999999994
Q ss_pred ceeee-----------------cCC----ceEEEE--eCCeEEEEEcccCccCceeEEEEEEcCCcceEEEEEEEEecCC
Q psy7042 221 GRVVQ-----------------SDD----RFKFTV--LDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLP 277 (2245)
Q Consensus 221 g~~l~-----------------~~~----~~~~~~--~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 277 (2245)
+..+. ... +..+.. ......|.|.++..+|+|.|+|.|.|..|....++.|.|...|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~ 239 (268)
T 3mj6_A 160 GSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHVVQDE 239 (268)
T ss_dssp TTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC-
T ss_pred CCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCceEEEEEEEEEEcCC
Confidence 32110 011 111110 1234579999999999999999999999999999999996544
Q ss_pred C
Q psy7042 278 G 278 (2245)
Q Consensus 278 ~ 278 (2245)
+
T Consensus 240 p 240 (268)
T 3mj6_A 240 F 240 (268)
T ss_dssp -
T ss_pred C
Confidence 3
No 266
>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C*
Probab=99.69 E-value=2.6e-15 Score=181.10 Aligned_cols=282 Identities=12% Similarity=0.036 Sum_probs=182.2
Q ss_pred CCCCCCCeeeeecCCcEEEEeeCCCCCCCcccccEEEEeeeCCCCCeEEEceeeeeeEEEecCCCCCEEEEEEEEEe-cc
Q psy7042 670 PDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAEN-VY 748 (2245)
Q Consensus 670 P~~p~~~~~~~~~~~si~lsW~~p~~~~~~~~~~y~v~~~~~~~~~w~~~~~~~~~~~~i~~L~p~t~y~~~v~a~n-~~ 748 (2245)
..||.++.+......++.|+|++|....++.+..|.+.+... |...- ....+.+.+|.++..|.|+|.|.+ ..
T Consensus 4 ~~pP~nl~~~~~~~~~v~l~W~pP~~~~~~~~~~Y~v~~~~~----~~~~~--~~~~~~~~~~~~~~~y~~~V~a~~~~~ 77 (314)
T 3bpo_C 4 QPPVTNLSVSVENLCTVIWTWNPPEGASSNCSLWYFSHFGDK----QDKKI--APETRRSIEVPLNERICLQVGSQCSTN 77 (314)
T ss_dssp CCCCEEEEEEEETTTEEEEEEECCSSCCCSSCCCEEECCC------CCCEE--ESSSEEEEECCCSSCEEEEEEECC---
T ss_pred CCCCcceEEEeCCceEEEEEEcCCCCCCCCceEEEEEEeccc----CceEe--ccccEEEEEEcCCCcEEEEEEEEecCC
Confidence 468889999888999999999987655455677899887542 21111 123456788999999999999954 45
Q ss_pred cCCCCCCCCccEEecCccccccccccccccCCCceeecccccccccCCceEEEEeeeccCccccccccceeccccccccc
Q psy7042 749 GRSDPSTTSDLITTKDTFKKQIKKRQYDFDETGKKIRGKADEKVSDYDQYVFDIYSKYVPQPVDIKTSSVYDHYDILEEI 828 (2245)
Q Consensus 749 G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 828 (2245)
|.+.++.........
T Consensus 78 ~~g~~s~~~~~~~~~----------------------------------------------------------------- 92 (314)
T 3bpo_C 78 ESEKPSILVEKCISP----------------------------------------------------------------- 92 (314)
T ss_dssp ------CCEEEEECC-----------------------------------------------------------------
T ss_pred CCCCCCcCeeeeeec-----------------------------------------------------------------
Confidence 544443321100000
Q ss_pred ccCceeEEEEeeecccCCeeEEEeeccCCchhhhhhheeeeeeeccCCCceEeecccccCCcceEEEEEEecCCCCCccc
Q psy7042 829 GTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFEVLDRPHPPENL 908 (2245)
Q Consensus 829 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~p~~l 908 (2245)
....+|.+|.++
T Consensus 93 --------------------------------------------------------------------~~~~pp~~P~~l 104 (314)
T 3bpo_C 93 --------------------------------------------------------------------PEGDPESAVTEL 104 (314)
T ss_dssp --------------------------------------------------------------------CCC-CCSSCEEE
T ss_pred --------------------------------------------------------------------CCCCCCCCCEec
Confidence 001477899999
Q ss_pred EEeeeeCceEEEEecCCCCCCCCccceEEEeeeecCCCceEEecc---eeeeceEEEecCC----CCceeeEEEEEEecc
Q psy7042 909 HADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSS---YVTTPFVRVRNLA----IGSTYEFRVMAENQY 981 (2245)
Q Consensus 909 ~~~~~~~~~~~l~W~~p~~~~g~~i~~y~i~~~~~~~~~~~~~~~---~~~~~~~~i~~L~----p~~~y~~~v~a~n~~ 981 (2245)
.+.......+.++|.++.+.+ .+.+|.|.|...+...+..... ......+.+..+. ..+.|.|+|.|.|..
T Consensus 105 ~c~~~~~~~~~c~W~~~~~~~--~~~~Y~l~y~~~~~~~~~~C~~~~~~~~~~~c~~~~~~~~~~~~~~y~~~V~a~n~~ 182 (314)
T 3bpo_C 105 QCIWHNLSYMKCSWLPGRNTS--PDTNYTLYYWHRSLEKIHQCENIFREGQYFGCSFDLTKVKDSSFEQHSVQIMVKDNA 182 (314)
T ss_dssp EEEEETTTEEEEEEECCC-----CCCCEEEEEEESSCSSCEECCCEEEETTEEEEEEECCC--------CCEEEEEEETT
T ss_pred eEEECCCCeEEEEECCCCCCC--CCccEEEEEEeCCCCccccCcCeecCCCeEEEEECCCCccccceeEEEEEEEEEcCC
Confidence 999888999999999987653 5789999987654444433321 1223556676665 478999999999999
Q ss_pred ccCCCccccCccccc-CCCCCCCCCCCCeeEeecCCeEEEEecCCCCCCCCccceEEEEEEecCCccceecccc------
Q psy7042 982 GLSKPALTIDPIKAK-HPFDVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMA------ 1054 (2245)
Q Consensus 982 g~~~~s~~~~~~~~~-t~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~------ 1054 (2245)
|.+..+ ...+. +....|.+|.++++. ...+.+.|+|++|...++. +..|.|+|+..++..|....+.
T Consensus 183 G~~~~~----~~~~~~~~~v~P~pP~~l~~~-~~~~~l~lsW~~P~~~~~~-~l~Yev~y~~~~~~~w~~~~~~~~~c~~ 256 (314)
T 3bpo_C 183 GKIKPS----FNIVPLTSRVKPDPPHIKNLS-FHNDDLYVQWENPQNFISR-CLFYEVEVNNSQTETHNVFYVQEAKCEN 256 (314)
T ss_dssp SCSCCE----EEEECSSSSEECCCCEEEEEE-EETTEEEEEEECCTTCCGG-GEEEEEEEEC--CCCEEEEEESCCCCCC
T ss_pred Cceecc----cEEEehhheEeeCCCCEEEEE-EcCCcEEEEEeCCCccCCc-eEEEEEEEEECCCCcceEEecccccccc
Confidence 887644 12222 234568999999987 7789999999998754333 6899999998877766532211
Q ss_pred ----ccCCcceeEEEEeecccccCCccCchhhhhhhhhcccccccccccCCcEEEEEEEEEecC----CCCCCCCCCcce
Q psy7042 1055 ----HIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAA----GQGPWSSSSDII 1126 (2245)
Q Consensus 1055 ----~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~v~A~n~~----G~~~~s~~~~~~ 1126 (2245)
....... .++|.+|.+++.|.|+|+|.+.. +.|.+|..+...
T Consensus 257 ~~~~~~~~~~~------------------------------~~~l~~L~p~t~Y~~qVra~~~~~~~~~~g~WS~WS~~~ 306 (314)
T 3bpo_C 257 PEFERNVENTS------------------------------CFMVPGVLPDTLNTVRIRVKTNKLCYEDDKLWSNWSQEM 306 (314)
T ss_dssp TTSSCCCSSEE------------------------------EEEEESCCTTSCEEEEEEEEECTTTSCCCCCCCCCCCCE
T ss_pred cccccccCCce------------------------------EEEEccCCCCCEEEEEEEeeecccccCCCCeeCCCCCCe
Confidence 0001111 12699999999999999999963 356666666554
Q ss_pred ee
Q psy7042 1127 MC 1128 (2245)
Q Consensus 1127 ~~ 1128 (2245)
..
T Consensus 307 ~~ 308 (314)
T 3bpo_C 307 SI 308 (314)
T ss_dssp EE
T ss_pred Ee
Confidence 43
No 267
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.69 E-value=4.6e-16 Score=182.26 Aligned_cols=167 Identities=13% Similarity=0.196 Sum_probs=124.1
Q ss_pred CCcceEEeCCCeEEEEEEEeee--cCCceEEEECC--eecc------------CCCeEEEEEcCcEEEEEEeeeccCCCe
Q psy7042 96 PLKDLVVPLGKLLTLQCEATGT--PVPKCRWLRNG--REIS------------SGARYRVETAGGVFRLHFNEVTDVDNG 159 (2245)
Q Consensus 96 ~~~~~~v~~G~~v~L~C~~~g~--p~~~i~W~~~g--~~l~------------~~~~~~~~~~~~~~~L~i~~~~~~d~G 159 (2245)
.|..+.+.+|++|+|.|.+.+. |.+.+.|+|++ ..+. ..+|+.+...++..+|.|.+++.+|+|
T Consensus 8 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG 87 (256)
T 3ux9_B 8 QPPSVSGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSEDEA 87 (256)
T ss_dssp CCSEEEECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCE
T ss_pred cCCcEEEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChhhCE
Confidence 3445889999999999999876 78899999842 2111 235788877777889999999999999
Q ss_pred EEEEEEEcCccc---ceeEEEEEecCCCe--------------------eecCCCceEEcCCCeEEEEEEEecCC--Cce
Q psy7042 160 DYTCEAYNSVGF---AHTSSRVKIGTPPR--------------------IDRMPNALYIPEGDNTKVKIFYAGDQ--PME 214 (2245)
Q Consensus 160 ~Y~C~a~n~~g~---~~~~~~l~V~~~P~--------------------~~~~~~~~~v~~G~~~~l~C~~~g~p--~~~ 214 (2245)
.|.|.|.|..+. ....+.|.|..+|. ....+....+.+|++++|.|.+.+.| .+.
T Consensus 88 ~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~ 167 (256)
T 3ux9_B 88 DYYCQVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVESGGGLVQPGGSLRLSCAASGFTFSSYA 167 (256)
T ss_dssp EEEEEEEETTTTEEEECCCEEEEEC----------------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSE
T ss_pred EEEEEEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEcCCCeEEcCCCeEEEEEEEeCCcccccE
Confidence 999999986542 22356788877652 12233455699999999999999877 789
Q ss_pred EEEeeC--ceeee-----------------cCCceEEEEe--CCeEEEEEcccCccCceeEEEEEEcCC
Q psy7042 215 VSLTKN--GRVVQ-----------------SDDRFKFTVL--DDYIIIFIKEIRKEDAGDYTVNLSNSS 262 (2245)
Q Consensus 215 i~W~~~--g~~l~-----------------~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~a~n~~ 262 (2245)
+.|||+ +..+. ...++.+... ....+|.|.+++.+|+|.|+|.|.|..
T Consensus 168 v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 236 (256)
T 3ux9_B 168 MSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARYIDF 236 (256)
T ss_dssp EEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred EEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCChhhCEEEEEEEEcCC
Confidence 999996 33221 1235555544 446679999999999999999999863
No 268
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.69 E-value=9.4e-17 Score=180.76 Aligned_cols=181 Identities=13% Similarity=0.070 Sum_probs=131.7
Q ss_pred CCCCceeccCCceEEcCCCeEEEEEEecCcCCCeEEEeeCCEeccCCceEEEEecCcEE--EEEEeeeccCCCeEEEEEE
Q psy7042 1695 GEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVF--RLHFNEVTDVDNGDYTCEA 1772 (2245)
Q Consensus 1695 ~~~p~~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~~~~l~~~~~~~~~~~~~~~--~L~i~~v~~~d~G~Y~C~~ 1772 (2245)
..+|.|...+. ..+.+|++++|.|.+.+ +.+.+.|+|+|..+....+ ......... .|.|.+++.+|+|.|+|.+
T Consensus 7 ~~~P~i~~~p~-~~v~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~~~-~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 83 (218)
T 1uct_A 7 FPMPFISAKSS-PVIPLDGSVKIQCQAIR-EAYLTQLMIIKNSTYREIG-RRLKFWNETDPEFVIDHMDANKAGRYQCQY 83 (218)
T ss_dssp SCCCCEEESSC-SEEETTCCEEEEECCCT-TCSEEEEEEEETTEEEECS-EECC----CCCEEEECSCCGGGCEEEEEEE
T ss_pred CCCCEEEecCC-CccCCCCCEEEEEEcCC-CCCEEEEEECCCccccccc-ccCCCCcceeeEEEEcccccccCEEEEEEE
Confidence 35778877766 57899999999999987 6779999999876542211 111111223 5999999999999999999
Q ss_pred ecCceeeE--EEEEEEecC---CCccccCCCceEEcCCCeEEEEEEEeccCCcEEEEEECCEEeecCCceEEEEcCCeEE
Q psy7042 1773 YNSVGFAH--TSSRVKIGT---PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYII 1847 (2245)
Q Consensus 1773 ~n~~g~~~--~~~~l~V~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~ 1847 (2245)
.|..|... ....|.|.. +|.+...+ ...+.+|++++|.|...+.|.+.+.|+|+|..+... .........
T Consensus 84 ~n~~~~~~~s~~~~l~V~~~~~~P~i~~~p-~~~v~~G~~v~L~C~~~~~~~~~~~W~k~g~~~~~~----~~~~~~~~~ 158 (218)
T 1uct_A 84 RIGHYRFRYSDTLELVVTGLYGKPFLSADR-GLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQ----HQSGEHPAN 158 (218)
T ss_dssp EETTTEEEECCCEEEEEECSSCCCEEEESS-CSEECTTCCCEEEEECSSSCCSEEEEEETTCSSCCS----EEECSSSEE
T ss_pred EcCCCceeecCCEEEEEcCcccCCEEEeCC-CCccCCCCCEEEEEeCCCCCCCEEEEEECCCccccc----ccCCCccCE
Confidence 99765433 346677754 56665544 457899999999997777788899999999876542 112345578
Q ss_pred EEEcccCcccceEEEEEEEcCCe-----eeEEEEEEEEeCC
Q psy7042 1848 IFIKEIRKEDAGDYTVNLSNSSG-----SVSGTFTINITGL 1883 (2245)
Q Consensus 1848 l~i~~~~~~d~G~Y~C~a~n~~g-----~~~~~~~l~v~~~ 1883 (2245)
|.|.++..+|+|.|+|.|.|..+ ..+..+.|.|.+.
T Consensus 159 L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g~ 199 (218)
T 1uct_A 159 FSLGPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTDS 199 (218)
T ss_dssp EECCSCCGGGCEEEEEEEECTTSTTEECCCCCCEEEEEC--
T ss_pred EEEccCCcccCEEEEEEEEcCCCCCcCCCCCCcEEEEEecC
Confidence 99999999999999999998642 3345567777654
No 269
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.69 E-value=2.5e-16 Score=183.57 Aligned_cols=178 Identities=12% Similarity=0.120 Sum_probs=122.8
Q ss_pred cCCcceEEeCCCeEEEEEEEeeecCCc-----eEEEECCeeccCC--------CeE-------EEE---EcCcEEEEEEe
Q psy7042 95 VPLKDLVVPLGKLLTLQCEATGTPVPK-----CRWLRNGREISSG--------ARY-------RVE---TAGGVFRLHFN 151 (2245)
Q Consensus 95 ~~~~~~~v~~G~~v~L~C~~~g~p~~~-----i~W~~~g~~l~~~--------~~~-------~~~---~~~~~~~L~i~ 151 (2245)
..|..+.+.+|++++|.|.+.|.|.+. |.|+|++...... .+. .+. ...+..+|.|.
T Consensus 8 ~~p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~ 87 (248)
T 3pv7_A 8 MAGGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLP 87 (248)
T ss_dssp STTSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEES
T ss_pred eCCCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeC
Confidence 355667899999999999999988776 9999964332110 000 000 01123359999
Q ss_pred eeccCCCeEEEEEEEcCcccceeEEEEEecCCCeeecCCCceEEcCCCeEEEEEEEec-CCCc-eEEEeeCceeeecCCc
Q psy7042 152 EVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAG-DQPM-EVSLTKNGRVVQSDDR 229 (2245)
Q Consensus 152 ~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~P~~~~~~~~~~v~~G~~~~l~C~~~g-~p~~-~i~W~~~g~~l~~~~~ 229 (2245)
+++.+|+|.|+|.|.|..+.....+.|.|..+|.+...+.. .+..|+.+.|.|.+.| .|.+ .|+|+|+|..+.....
T Consensus 88 ~v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~P~v~~~~~~-~~~~~~~~~L~C~~~g~~P~pi~v~W~k~g~~l~~~~~ 166 (248)
T 3pv7_A 88 GIQLEEAGEYRCEVVVTPLKAQGTVQLEVVASPASRLLLDQ-VGMKENEDKYMCESSGFYPEAINITWEKQTQKFPHPIE 166 (248)
T ss_dssp SCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCEEEEECC---------CEEEEEEEEEBSSCCEEEEEEECSSSCSCEE
T ss_pred CCCHHHCeEEEEEEEeCCccceeEEEEEEecCCceEEecCC-ccccCCCcEEEEEEccEECCCeEEEEEECCccCCCccc
Confidence 99999999999999999888888899999999998776653 3456888889999998 8988 9999999965432100
Q ss_pred -------eEEEEeC-----CeEEEEEcccCccCceeEEEEEEcCCcc--eEEEEEEEE
Q psy7042 230 -------FKFTVLD-----DYIIIFIKEIRKEDAGDYTVNLSNSSGS--VSGTFTINI 273 (2245)
Q Consensus 230 -------~~~~~~~-----~~~~L~i~~~~~~d~G~Y~C~a~n~~g~--~~~~~~l~V 273 (2245)
....... ....|.|.....+|.|.|+|.|.|..+. ...++.|.|
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~~~~~~~~~~v~l~V 224 (248)
T 3pv7_A 167 ISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHASLHTPLRSNFTLTA 224 (248)
T ss_dssp ECTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEECTTCSSCEEEEECC--
T ss_pred cccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEECCCCCCCcEEEEEEEE
Confidence 0011111 1246889999999999999999999886 556777777
No 270
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.68 E-value=4.7e-17 Score=181.70 Aligned_cols=170 Identities=15% Similarity=0.127 Sum_probs=121.6
Q ss_pred CCCceeccCCceEEcCCCeEEEEEEecCcCCCeEEEeeCCEeccCCceEEEEecCcEEEEEEeeeccCCCeEEEEEEecC
Q psy7042 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNS 1775 (2245)
Q Consensus 1696 ~~p~~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~ 1775 (2245)
.+|.|...+. ..+.+|++++|.|.+.+.|. .+.|+|+|..+....+.. ........|.|.+++.+|+|.|+|.+.|.
T Consensus 4 ~~P~i~~~p~-~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~-~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 80 (198)
T 1ugn_A 4 PKPTLWAEPG-SVITQGSPVTLRCQGGQETQ-EYRLYREKKTAPWITRIP-QELVKKGQFPIPSITWEHTGRYRCYYGSD 80 (198)
T ss_dssp CCCEEEEESC-SEEETTCCEEEEEECCTTCC-CEEEEESSSCCHHHHTSC-HHHHTTTEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCeEeccCC-CcccCCCcEEEEEEecCCCc-EEEEEECCcccccccccc-ccCCcccEEEECCCCHHHCeEEEEEEECC
Confidence 5777777666 48899999999999998776 699999998764211100 00112234999999999999999999998
Q ss_pred c-e--eeEEEEEEEecC---CCccccCCCceEEcCCCeEEEEEEEeccCCcEEEEEECCEEeecCCc-eEEEE-cCCeEE
Q psy7042 1776 V-G--FAHTSSRVKIGT---PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDR-FKFTV-LDDYII 1847 (2245)
Q Consensus 1776 ~-g--~~~~~~~l~V~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~v~W~~~g~~l~~~~~-~~~~~-~~~~~~ 1847 (2245)
. | .....+.|.|.. +|.+...+ ...+.+|++++|.|.+.+. .+.+.|+|+|..+..... +.... ......
T Consensus 81 ~~g~~~~s~~~~l~V~~~~~~p~i~~~~-~~~v~~G~~v~L~C~~~~~-~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~ 158 (198)
T 1ugn_A 81 TAGRSESSDPLELVVTGAYIKPTLSAQP-SPVVNSGGNVTLQCDSQVA-FDGFILCKEGEDEHPQCLNSQPHARGSSRAI 158 (198)
T ss_dssp TTEECCCCCCEEEEEECSSCCCEEEEES-CSEEETTCCEEEEEECSSC-CSEEEEEEC------CEEEC------CCEEE
T ss_pred CCCcccCCccEEEEEcccccCCccccCC-ccccCCCCcEEEEEecCCC-CcEEEEEECCCccCCccccccccCCCcceeE
Confidence 7 5 334557788876 45554433 3678899999999999998 789999999987743321 11111 123578
Q ss_pred EEEcccCcccceEEEEEEEcCCe
Q psy7042 1848 IFIKEIRKEDAGDYTVNLSNSSG 1870 (2245)
Q Consensus 1848 l~i~~~~~~d~G~Y~C~a~n~~g 1870 (2245)
|.|.++..+|+|.|+|.|.|..+
T Consensus 159 L~i~~v~~~D~G~Y~C~a~n~~~ 181 (198)
T 1ugn_A 159 FSVGPVSPSRRWWYRCYAYDSNS 181 (198)
T ss_dssp EEECCCCTTSCEEEEEEEECTTS
T ss_pred EEecccCcccCeEEEEEEEeCCC
Confidence 99999999999999999999876
No 271
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.68 E-value=4e-16 Score=169.42 Aligned_cols=164 Identities=18% Similarity=0.230 Sum_probs=129.6
Q ss_pred CCCceeccCCceEEcCCCeEEEEEEecCcC-CCeEEEeeCCEeccCCceEEEEecCcEEEEEEeeeccCCCeEEEEEEec
Q psy7042 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTP-VPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYN 1774 (2245)
Q Consensus 1696 ~~p~~~~~~~~~~~~~G~~v~L~C~~~~~p-~~~v~W~~~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n 1774 (2245)
.+|.+...+....+.+|+++.|.|.+.+.| .+.+.|+++|..+..... .+.|.+++.+|+|.|+|.+.|
T Consensus 3 p~p~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~~~~----------~~~~~~~~~~d~G~Y~C~~~~ 72 (170)
T 3ry4_A 3 PKAVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTHTQ----------PSYRFKANNNDSGEYTCQTGQ 72 (170)
T ss_dssp CBCEEEEESCCSEEETTCEEEEEEESCCCSSSSCEEEEETTEECTTCCS----------SEEEEECCGGGCEEEEEEETT
T ss_pred CCCEEEeCCCCeEEECCCcEEEEEEecCCCCcceEEEEECCeEcccCcc----------ceEEEecccccCeEEEEEEeC
Confidence 356666677777899999999999998886 578999999998865421 277889999999999999997
Q ss_pred CceeeEEEEEEEecCCCccccCCCceEEcCCCeEEEEEEEec-cCCcEEEEEECCEEeecCCceEEEEcCCeEEEEEccc
Q psy7042 1775 SVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAG-DQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEI 1853 (2245)
Q Consensus 1775 ~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~l~i~~~ 1853 (2245)
... ...+.|.|..+|.+...+ ...+.+|+.+.|.|.+.+ .|.+.+.|+++|..+... .....|.|.++
T Consensus 73 ~~~--s~~~~l~v~~~~~~~~~~-~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~--------~~~~~L~i~~v 141 (170)
T 3ry4_A 73 TSL--SDPVHLTVLFEWLVLQTP-HLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKFS--------HLDPTFSIPQA 141 (170)
T ss_dssp SBC--CCCEEEEEECCSEEEECS-CSEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEEE--------SSCCEEEESSC
T ss_pred CCc--eEeEEEEEECCceEecCC-CceeecCCeEEEEEECCCCCCCceEEEEECCeEcccc--------CCCCeEEEEec
Confidence 544 335677787776554433 467889999999999954 567999999999987532 23347999999
Q ss_pred CcccceEEEEEEEcCCee-eEEEEEEEE
Q psy7042 1854 RKEDAGDYTVNLSNSSGS-VSGTFTINI 1880 (2245)
Q Consensus 1854 ~~~d~G~Y~C~a~n~~g~-~~~~~~l~v 1880 (2245)
..+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 142 ~~~d~G~Y~C~a~n~~g~~~s~~~~l~V 169 (170)
T 3ry4_A 142 NHSHSGDYHCTGNIGYTLFSSKPVTITV 169 (170)
T ss_dssp CGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred cccCCEEEEEEEEeCcCccccccEEEEE
Confidence 999999999999999986 445566655
No 272
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.68 E-value=9.9e-17 Score=189.43 Aligned_cols=198 Identities=15% Similarity=0.145 Sum_probs=121.6
Q ss_pred CccCCcEEEEEEEEcCCCCCCCCCccccEEEeeccCCCCCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEEC--Ce
Q psy7042 52 LVEGNDYEFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRN--GR 129 (2245)
Q Consensus 52 ~~~~d~G~Y~C~a~n~~g~~~~~~~~~~~~v~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~--g~ 129 (2245)
.+..|.+.|.|+|.|..|..... ..+.++.+|..+.+.+|++++|.|.+.+ +.+.|.|+|. +.
T Consensus 3 ~~~~~~~~y~~~~~~~~g~~~~~--------------~~~~v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~ 67 (270)
T 3qib_D 3 NERADLIAYLKQATKGGGGSGGG--------------GGMKVIQTPRYLVKGQGQKAKMRCIPEK-GHPVVFWYQQNKNN 67 (270)
T ss_dssp ---------------------------------------CCCEEECSEEEEETTSCEEEEEECCT-TCCEEEEEEECTTC
T ss_pred chhhhHHHHHHHHhccCCccccc--------------cceeEEeCCCeEEEcCCCCEEEEEEecC-CCceEEEEEECCCC
Confidence 46789999999999887765422 2456677788899999999999999865 6788999982 21
Q ss_pred ec------------cCC---C-eEEEEE-cCcEEEEEEeeeccCCCeEEEEEEEcCcc----cceeEEEEEecC------
Q psy7042 130 EI------------SSG---A-RYRVET-AGGVFRLHFNEVTDVDNGDYTCEAYNSVG----FAHTSSRVKIGT------ 182 (2245)
Q Consensus 130 ~l------------~~~---~-~~~~~~-~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g----~~~~~~~l~V~~------ 182 (2245)
.. ... + |+.+.. ..+..+|.|.+++.+|+|.|.|.|.+..+ .....+.|.|..
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~ 147 (270)
T 3qib_D 68 EFKFLINFQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLEDLKNVF 147 (270)
T ss_dssp CEEEEEEEETTEEEEECHHHHHHEEEECCTTSCEEEEESSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEESCSTTCB
T ss_pred CcEEEEEECCCCceecCCccCCcEEEEeCCCcEEEEEECCCCHhHCeEEEEEEecCCCccceEECCcEEEEEcccccccc
Confidence 11 000 1 555553 34466899999999999999999997432 222345677765
Q ss_pred CCeeec-CCCceEEcCCCeEEEEEEEec-CCCc-eEEEeeCceeeecCCceEE---E-----EeC---CeEEEEEcccCc
Q psy7042 183 PPRIDR-MPNALYIPEGDNTKVKIFYAG-DQPM-EVSLTKNGRVVQSDDRFKF---T-----VLD---DYIIIFIKEIRK 248 (2245)
Q Consensus 183 ~P~~~~-~~~~~~v~~G~~~~l~C~~~g-~p~~-~i~W~~~g~~l~~~~~~~~---~-----~~~---~~~~L~i~~~~~ 248 (2245)
+|.+.. .+....+.+|+.++|.|.+.| .|.+ .++|+|||..+........ . ..+ ....|.|.....
T Consensus 148 ~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~ 227 (270)
T 3qib_D 148 PPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFW 227 (270)
T ss_dssp CCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESCTTSSSCCEEEEEEEEEEHHHH
T ss_pred CCceEEECCCccccccCCceEEEEEecceeCCCeEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHh
Confidence 565443 344455667999999999988 6766 8999999999865321100 0 001 113578888887
Q ss_pred cC-ceeEEEEEEcCCcc
Q psy7042 249 ED-AGDYTVNLSNSSGS 264 (2245)
Q Consensus 249 ~d-~G~Y~C~a~n~~g~ 264 (2245)
+| +|.|+|.|.|....
T Consensus 228 ~d~~g~YtC~v~~~~l~ 244 (270)
T 3qib_D 228 QNPRNHFRCQVQFYGLS 244 (270)
T ss_dssp HSTTCEEEEEEEECCBC
T ss_pred ccCCCeEEEEEEecCCC
Confidence 78 99999999997643
No 273
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.68 E-value=1.3e-16 Score=178.96 Aligned_cols=167 Identities=13% Similarity=0.206 Sum_probs=120.7
Q ss_pred ceEEeCCCeEEEEEEEe----eecCCceEEEECCeeccC------------CCeEEEEEcCcEEEEEEeeeccCCCeEEE
Q psy7042 99 DLVVPLGKLLTLQCEAT----GTPVPKCRWLRNGREISS------------GARYRVETAGGVFRLHFNEVTDVDNGDYT 162 (2245)
Q Consensus 99 ~~~v~~G~~v~L~C~~~----g~p~~~i~W~~~g~~l~~------------~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 162 (2245)
.+.+.+|++++|.|.+. +.|.+.+.|+|++..+.. ..|..+... +..+|.|.+++.+|+|.|+
T Consensus 3 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~~~-~~~~L~I~~v~~~D~G~Y~ 81 (201)
T 1dr9_A 3 HVTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDIT-NNLSIVILALRPSDEGTYE 81 (201)
T ss_dssp EEEEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEEST-TTTEEEECSCCGGGCEEEE
T ss_pred eEEEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEccC-CCcEEEEecccchhCeEEE
Confidence 46789999999999995 457789999999987631 123333222 2336999999999999999
Q ss_pred EEEEcCcccce-----eEEEEEecCC---CeeecCCCceEEcCCCeEEEEEEEe-cCCCceEEEeeCceeeecCCceEEE
Q psy7042 163 CEAYNSVGFAH-----TSSRVKIGTP---PRIDRMPNALYIPEGDNTKVKIFYA-GDQPMEVSLTKNGRVVQSDDRFKFT 233 (2245)
Q Consensus 163 C~a~n~~g~~~-----~~~~l~V~~~---P~~~~~~~~~~v~~G~~~~l~C~~~-g~p~~~i~W~~~g~~l~~~~~~~~~ 233 (2245)
|.|.|..|... ..+.|.|..+ |.+... ....|+.++|.|.+. |.|.|.|+|+|+|..+..... .+.
T Consensus 82 C~~~~~~g~~~~~~~~~~~~l~V~~~~~~p~~~~~----~~~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~~~~-~~~ 156 (201)
T 1dr9_A 82 CVVLKYEKDAFKREHLAEVTLSVKADFPTPSISDF----EIPTSNIRRIICSTSGGFPEPHLSWLENGEELNAINT-TVS 156 (201)
T ss_dssp EEEEECCTTSCEEEEEEEEEEEEECCCCCCEEEEE----ECSSTTEEEEEEEEEEESSCEEEEEEESSCEECCSEE-EEE
T ss_pred EEEEcCCCCccccccccEEEEEEcCCCCCCceEec----cCCCCCeEEEEEecCCccCCCEEEEEECCEECccccc-eEE
Confidence 99999876553 4667888776 333221 124589999999995 999999999999999875432 222
Q ss_pred Ee-C-Ce-EEEEEcccCccCceeEEEEEEcCCcceEEEEEE
Q psy7042 234 VL-D-DY-IIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTI 271 (2245)
Q Consensus 234 ~~-~-~~-~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 271 (2245)
.. . .. ....+..+..+|.|.|+|.|.|..|..+..+.+
T Consensus 157 ~~~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~~s~~~~~ 197 (201)
T 1dr9_A 157 QDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQTFNW 197 (201)
T ss_dssp ECTTTCCEEEEEEEEEETTSCEEEEEEEEETTCCEEEEEEE
T ss_pred ecCCCcEEEEEEEEEEEecCCCEEEEEEecCcceeeeEEec
Confidence 22 1 21 222334556689999999999999987766554
No 274
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.68 E-value=4e-16 Score=176.41 Aligned_cols=173 Identities=18% Similarity=0.267 Sum_probs=132.5
Q ss_pred CCceEEcCCCeEEEEEEecCcCCCeEEEeeCCEeccC-------------------CceEEEEecCcEEEEEEeeeccCC
Q psy7042 1704 LKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISS-------------------GARYRVETAGGVFRLHFNEVTDVD 1764 (2245)
Q Consensus 1704 ~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~~~~l~~-------------------~~~~~~~~~~~~~~L~i~~v~~~d 1764 (2245)
+....+.+|++++|.|...+.+.+.+.|++++..... ..|+.+..++ +|.|.+++.+|
T Consensus 6 ~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~---~L~i~~v~~~D 82 (208)
T 3r4d_A 6 AVPPQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNG---SLLFQMITMKD 82 (208)
T ss_dssp EESSEEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTS---CEEECSCCGGG
T ss_pred CccceeecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecCC---eEEEccccccC
Confidence 3446789999999999988888889999997543221 1233332222 49999999999
Q ss_pred CeEEEEEEecCc-eeeEEEEEEEecCC---CccccCCCceEEcCCCeEEEEEEEeccCCcEEEEEECCEEeecCCceEEE
Q psy7042 1765 NGDYTCEAYNSV-GFAHTSSRVKIGTP---PRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFT 1840 (2245)
Q Consensus 1765 ~G~Y~C~~~n~~-g~~~~~~~l~V~~~---p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~v~W~~~g~~l~~~~~~~~~ 1840 (2245)
+|.|+|.+.+.. +.......|.|..+ |.+...+.. +.+|+.+.|.|.+.+.| +.+.|+++|..+....++.+.
T Consensus 83 ~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~--~~~g~~v~l~C~~~~~p-p~i~W~~~g~~l~~~~~~~~~ 159 (208)
T 3r4d_A 83 MGVYTLDMTDENYRRTQATVRFHVHQPVTQPFLQVTNTT--VKELDSVTLTCLSNDIG-ANIQWLFNSQSLQLTERMTLS 159 (208)
T ss_dssp CEEEEEEEECSSCEEEEEEEEEEEECCCCCCEEEESCSS--CCTTCCEEEEEECSCTT-CEEEEEETTEECCCCSSEEEE
T ss_pred CeEEEEEEEcccCceeEEEEEEEeccCCCCCEEecCCce--EeeCCCEEEEEECCCCC-CceEEEECCEeCCCCCCeEEc
Confidence 999999999984 66667788888765 444444433 88899999999999976 799999999999877766544
Q ss_pred EcCCeEEEEEcccCcccceEEEEEEEcCCeeeE-EEEEEEEeCCC
Q psy7042 1841 VLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVS-GTFTINITGLP 1884 (2245)
Q Consensus 1841 ~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~-~~~~l~v~~~p 1884 (2245)
.....|.|.++..+|+|.|+|.|.|..|... ..++|.|..+|
T Consensus 160 --~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v~~~~ 202 (208)
T 3r4d_A 160 --QNNSILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDIIFDP 202 (208)
T ss_dssp --TTTTEEEESSCCGGGCEEEEEEEECTTCCEECCCEEECCC---
T ss_pred --CCCCEEEEeccCHHhCeEEEEEEecCCCcccCCceeeeEEeCC
Confidence 3335799999999999999999999999654 45777776554
No 275
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=99.68 E-value=1.2e-15 Score=173.00 Aligned_cols=187 Identities=24% Similarity=0.344 Sum_probs=148.6
Q ss_pred CCCCCCCeeeeecCCcEEEEeeCCCCCCCcccccEEEEeeeCCC-CCeEEEce-------------eeeeeEEEecCCCC
Q psy7042 670 PDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPM-SSWIRVGN-------------TRFTTMAITGLSPG 735 (2245)
Q Consensus 670 P~~p~~~~~~~~~~~si~lsW~~p~~~~~~~~~~y~v~~~~~~~-~~w~~~~~-------------~~~~~~~i~~L~p~ 735 (2245)
+.||.++.+..++.+++.|+|.+|..++ +.+.+|.|+++.... ..|..... .....+.+.+|.|+
T Consensus 2 ~~pP~~~~~~~~~~~sv~l~W~~p~~~~-~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~ 80 (214)
T 2ibg_A 2 TYPPTPPNVTRLSDESVMLRWMVPRNDG-LPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQ 80 (214)
T ss_dssp CCCCCCCEEEEEETTEEEEEEEEECCSS-CCEEEEEEEEEESSSSCCCEECSCCEECCSSSCSSSSEEEEEEEECSCCTT
T ss_pred CCCCCCCEeeEecCCEEEEEEECCCCCC-CCceEEEEEEEECCCCCcCcccccccCccccccccccCcceeEEecCCcCC
Confidence 4678888889999999999999876554 589999999998654 77876652 45678899999999
Q ss_pred CEEEEEEEEEecccCCCCCCCCccEEecCccccccccccccccCCCceeecccccccccCCceEEEEeeeccCccccccc
Q psy7042 736 HQYEFRVYAENVYGRSDPSTTSDLITTKDTFKKQIKKRQYDFDETGKKIRGKADEKVSDYDQYVFDIYSKYVPQPVDIKT 815 (2245)
Q Consensus 736 t~y~~~v~a~n~~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (2245)
+.|.|+|.|.|..|.+..+..+..+.+....
T Consensus 81 t~Y~~~V~A~n~~g~~~~s~~s~~~~~~~~~------------------------------------------------- 111 (214)
T 2ibg_A 81 HTYRFRILAVYSNNDNKESNTSAKFYLQPGA------------------------------------------------- 111 (214)
T ss_dssp CEEEEEEEEEETTSCEEECCCCCCEECCCST-------------------------------------------------
T ss_pred CEEEEEEEEEecCCCCCCCCCcccEEeccCc-------------------------------------------------
Confidence 9999999999999987766533322221100
Q ss_pred cceecccccccccccCceeEEEEeeecccCCeeEEEeeccCCchhhhhhheeeeeeeccCCCceEeecccccCCcceEEE
Q psy7042 816 SSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLI 895 (2245)
Q Consensus 816 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 895 (2245)
T Consensus 112 -------------------------------------------------------------------------------- 111 (214)
T 2ibg_A 112 -------------------------------------------------------------------------------- 111 (214)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEecCCCCCcccEEeeeeCceEEEEecCCCCCCCCccceEEEeeeecCC-CceEEeccee-eeceEEEecCCCCceeeE
Q psy7042 896 FEVLDRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNS-TVWTKVSSYV-TTPFVRVRNLAIGSTYEF 973 (2245)
Q Consensus 896 ~~~~~~P~~p~~l~~~~~~~~~~~l~W~~p~~~~g~~i~~y~i~~~~~~~-~~~~~~~~~~-~~~~~~i~~L~p~~~y~~ 973 (2245)
...+|.+|.++.+...+.+++.|+|++|.+..+..+.+|.|+++.... ..|..+.... ....+.|.+|.|++.|.|
T Consensus 112 --~~~~~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~ 189 (214)
T 2ibg_A 112 --ALDPMPVPELLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKATIEGAHARSFKIAPLETATMYEF 189 (214)
T ss_dssp --TSCCCCCCEECCCBCCSSSCEEEEEECCTTCCGGGCCEEEEEEEETTCCSCCEEEEEECTTCCEEEECSCCTTCEEEE
T ss_pred --CCCCCCCCcccEEEEccCCeEEEEEeCCCccCCCCcceEEEEEEECCCCcceEEeeccCCcceEEEeCCCCCCCEEEE
Confidence 003567888999988899999999999874455599999999998766 6777665544 357899999999999999
Q ss_pred EEEEEeccccCCCcc
Q psy7042 974 RVMAENQYGLSKPAL 988 (2245)
Q Consensus 974 ~v~a~n~~g~~~~s~ 988 (2245)
+|+|.|..|.|+++.
T Consensus 190 ~V~A~n~~G~g~~S~ 204 (214)
T 2ibg_A 190 KLQSFSAASASEFSA 204 (214)
T ss_dssp EEEEECSSCBCCCCC
T ss_pred EEEEEcCCccCCCcc
Confidence 999999999988873
No 276
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.68 E-value=5.8e-16 Score=181.03 Aligned_cols=172 Identities=19% Similarity=0.303 Sum_probs=129.4
Q ss_pred CCceecCCcceEEeCCCeEEEEEEEeeec------CCceEEEEC--Ceecc------------CCCeEEEEEcCcEEEEE
Q psy7042 90 KPDFIVPLKDLVVPLGKLLTLQCEATGTP------VPKCRWLRN--GREIS------------SGARYRVETAGGVFRLH 149 (2245)
Q Consensus 90 ~P~~~~~~~~~~v~~G~~v~L~C~~~g~p------~~~i~W~~~--g~~l~------------~~~~~~~~~~~~~~~L~ 149 (2245)
.+.++..|..+.+.+|++|+|.|.+.+.| .+.|.|+|+ |..+. ...|+.+...++..+|.
T Consensus 5 ~~~v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~ 84 (264)
T 2gjj_A 5 DIVLTQTPSSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTLT 84 (264)
T ss_dssp CCCEEEECSEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEE
T ss_pred ccceEecCCeEEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEEE
Confidence 46677788889999999999999998877 678999984 32211 14578877666777899
Q ss_pred EeeeccCCCeEEEEEEEcCcccc-eeEEEEEecCCC------------------ee-ecCCCceEEcCCCeEEEEEEEec
Q psy7042 150 FNEVTDVDNGDYTCEAYNSVGFA-HTSSRVKIGTPP------------------RI-DRMPNALYIPEGDNTKVKIFYAG 209 (2245)
Q Consensus 150 i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~P------------------~~-~~~~~~~~v~~G~~~~l~C~~~g 209 (2245)
|.+++.+|+|.|.|.|.|..+.. ...+.|.|..+| .+ ...+....+.+|++++|.|.+.+
T Consensus 85 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~ 164 (264)
T 2gjj_A 85 IGSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPEVVKTGASVKISCKASG 164 (264)
T ss_dssp ESSCCGGGCEEEEEEECSSSSCEECCCEEEEEECC-------------------CCEEEECCCEEECTTCCEEEEEEEES
T ss_pred ECCCCHHHCEEEEEEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeCCCCEEEcCCCcEEEEEEEeC
Confidence 99999999999999999876532 234578887663 22 22234457999999999999998
Q ss_pred CCC--ceEEEeeCc--ee---ee---c-----------CCceEEEE--eCCeEEEEEcccCccCceeEEEEEEcC
Q psy7042 210 DQP--MEVSLTKNG--RV---VQ---S-----------DDRFKFTV--LDDYIIIFIKEIRKEDAGDYTVNLSNS 261 (2245)
Q Consensus 210 ~p~--~~i~W~~~g--~~---l~---~-----------~~~~~~~~--~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 261 (2245)
.|. +.|.|||+. .. +. . ..++.+.. ......|.|.+++.+|+|.|.|.|.|.
T Consensus 165 ~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 239 (264)
T 2gjj_A 165 YSFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTSEDSADYYCVRSGN 239 (264)
T ss_dssp SCGGGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred CccCCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCcccCEEEEEEEecC
Confidence 874 799999963 21 21 0 23444443 234678999999999999999999985
No 277
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.68 E-value=1.6e-16 Score=172.08 Aligned_cols=155 Identities=15% Similarity=0.188 Sum_probs=120.2
Q ss_pred eEEcCCCeEEEEEEecC--cCCCeEEEeeCCEecc----------CCceEEEEecCcEEEEEEeeeccCCCeEEEEEEec
Q psy7042 1707 LVVPLGKLLTLQCEATG--TPVPKCRWLRNGREIS----------SGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYN 1774 (2245)
Q Consensus 1707 ~~~~~G~~v~L~C~~~~--~p~~~v~W~~~~~~l~----------~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n 1774 (2245)
+.+.+|++++|.|.... .+.+.|.|+|++..+. ...|+.+..++ . |.|.+++.+|+|.|+|.+.|
T Consensus 6 v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~g-s--L~I~~v~~~D~G~Y~C~~~n 82 (176)
T 1hng_A 6 VWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANG-D--LKIKNLTRDDSGTYNVTVYS 82 (176)
T ss_dssp EEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTTS-C--EEESSCCGGGCEEEEEEEEE
T ss_pred EEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECCCC-c--EEEcccccccCEEEEEEEEe
Confidence 66889999999995433 5667899999997542 34566664333 2 99999999999999999999
Q ss_pred Cceee--EEEEEEEecCCCccccCCCceEEcCCCeEEEEEEEeccCCcEEEEEECCEEeecCCceEEEEcCCeEEEEEcc
Q psy7042 1775 SVGFA--HTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKE 1852 (2245)
Q Consensus 1775 ~~g~~--~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~l~i~~ 1852 (2245)
..|.. ...+.|.|..++. .......+..+.|.|.+.|.|.+.|.|+++|+.+....+ +.|..
T Consensus 83 ~~g~~~~~~~~~l~V~~~~~-----~p~i~~~~~~v~L~C~~~g~p~p~i~W~~~g~~l~~~~~-----------~~i~~ 146 (176)
T 1hng_A 83 TNGTRILNKALDLRILEMVS-----KPMIYWECSNATLTCEVLEGTDVELKLYQGKEHLRSLRQ-----------KTMSY 146 (176)
T ss_dssp TTCCEEEEEEEEEEEECCCC-----CCEEEEETTTTEEEEECSSCSSCEEEEEETTEEEEEESS-----------SEEEE
T ss_pred CCCCEEEEEEEEEEEeCCCC-----CCEEEecCCcEEEEEEecCCCCcEEEEEECCEECCCCCc-----------EEEEE
Confidence 98886 6667888876532 111122355699999999999999999999998865543 33447
Q ss_pred cCcccceEEEEEEEcCCeeeEEEEEEEE
Q psy7042 1853 IRKEDAGDYTVNLSNSSGSVSGTFTINI 1880 (2245)
Q Consensus 1853 ~~~~d~G~Y~C~a~n~~g~~~~~~~l~v 1880 (2245)
+..+|+|.|+|.|.|..|..+..+.|.+
T Consensus 147 ~~~~d~G~Y~C~a~N~~g~~~~~~~l~~ 174 (176)
T 1hng_A 147 QWTNLRAPFKCKAVNRVSQESEMEVVNC 174 (176)
T ss_dssp ECSCCSSCEEEEEEETTEEEEEEECCCC
T ss_pred EEccCCeEEEEEEEecCCCceecccccC
Confidence 7799999999999999999888876654
No 278
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.68 E-value=1.4e-16 Score=181.18 Aligned_cols=169 Identities=15% Similarity=0.237 Sum_probs=120.5
Q ss_pred cCCcceEEeCCCeEEEEEEEeee-------cCCceEEEECCee------c-----------cCCCeEEEEEc--CcEEEE
Q psy7042 95 VPLKDLVVPLGKLLTLQCEATGT-------PVPKCRWLRNGRE------I-----------SSGARYRVETA--GGVFRL 148 (2245)
Q Consensus 95 ~~~~~~~v~~G~~v~L~C~~~g~-------p~~~i~W~~~g~~------l-----------~~~~~~~~~~~--~~~~~L 148 (2245)
..|..+.+.+|+.|+|.|.+.+. +.+.|.|+|++.. + ....|+.+..+ .+..+|
T Consensus 5 ~~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL 84 (214)
T 2zg1_A 5 QVQKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSL 84 (214)
T ss_dssp ECCSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCE
T ss_pred eCCcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEE
Confidence 34667899999999999999754 5678999998752 1 11246665432 234469
Q ss_pred EEeeeccCCCeEEEEEEEcCcccc----eeEEEEEecCC---CeeecCCCceEEcCCCeEEEEEEEec----CCCceEEE
Q psy7042 149 HFNEVTDVDNGDYTCEAYNSVGFA----HTSSRVKIGTP---PRIDRMPNALYIPEGDNTKVKIFYAG----DQPMEVSL 217 (2245)
Q Consensus 149 ~i~~~~~~d~G~Y~C~a~n~~g~~----~~~~~l~V~~~---P~~~~~~~~~~v~~G~~~~l~C~~~g----~p~~~i~W 217 (2245)
.|.+++.+|+|.|.|.|.+..+.. ...+.|.|..+ |.+.. +. .+.+|+.++|.|.+.| .|.|.|+|
T Consensus 85 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~-~~--~~~~G~~v~L~C~~~~~~~~~p~p~v~W 161 (214)
T 2zg1_A 85 SIGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHF-LE--PLESGRPTRLSCSLPGSCEAGPPLTFSW 161 (214)
T ss_dssp EECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC---C--CCCTTCCEEEEEECTTCCSCSSCCEEEE
T ss_pred EEccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceec-Cc--cccCCCeEEEEEEeccCCCCCCCceEEE
Confidence 999999999999999999876322 23677888774 44543 22 2679999999999976 48899999
Q ss_pred eeCceeeecCCceEEEEeCCeEEEEEcccCccCceeEEEEEEcCCcceEEEEEEE
Q psy7042 218 TKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTIN 272 (2245)
Q Consensus 218 ~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 272 (2245)
+|++..+..... .....|.|..+..+|+|.|+|.|.|..+..+.++.+.
T Consensus 162 ~~~~~~~~~~~~------~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~~~~~~~v~ 210 (214)
T 2zg1_A 162 TGNALSPLDPET------TRSSELTLTPRPEDHGTNLTCQMKRQGAQVTTERTVQ 210 (214)
T ss_dssp ESSTTSSSCSSC------CCSSEEEECCCTTCCSCEEEEEEECC----CCEEEEE
T ss_pred eCCCCccCCCCc------eeEEEEEEecccHHcCcEEEEEEEeCCCCcceEEEEE
Confidence 999876432211 2334799999999999999999999875544443333
No 279
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.67 E-value=2.4e-16 Score=179.75 Aligned_cols=184 Identities=12% Similarity=0.099 Sum_probs=124.6
Q ss_pred CCcceEEeCCCeEEEEEEEeeec--CCceEEEECC--eec------c-----------CCCeEEEEEc--CcEEEEEEee
Q psy7042 96 PLKDLVVPLGKLLTLQCEATGTP--VPKCRWLRNG--REI------S-----------SGARYRVETA--GGVFRLHFNE 152 (2245)
Q Consensus 96 ~~~~~~v~~G~~v~L~C~~~g~p--~~~i~W~~~g--~~l------~-----------~~~~~~~~~~--~~~~~L~i~~ 152 (2245)
.|..+.+.+|++|+|.|.+.+.| .+.|.|+|++ ..+ . ..+|+.+..+ ++..+|.|.+
T Consensus 6 qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (227)
T 1mju_H 6 QPGAELVKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLSS 85 (227)
T ss_dssp CCSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECS
T ss_pred CCCCeEEcCCCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEECC
Confidence 34567899999999999998876 6789999853 221 0 1347777653 4567899999
Q ss_pred eccCCCeEEEEEEEcCcccc-eeEEEEEecC----CCeeecCCCceEEcCCCeEEEEEEEecC-CCc-eEEEeeCceeee
Q psy7042 153 VTDVDNGDYTCEAYNSVGFA-HTSSRVKIGT----PPRIDRMPNALYIPEGDNTKVKIFYAGD-QPM-EVSLTKNGRVVQ 225 (2245)
Q Consensus 153 ~~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~----~P~~~~~~~~~~v~~G~~~~l~C~~~g~-p~~-~i~W~~~g~~l~ 225 (2245)
++.+|+|.|.|.|.|..+.. ...+.|.|.. +|.+...+....+.+|+.++|.|.+.|. |.+ .|.|+|+|..+.
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~ 165 (227)
T 1mju_H 86 LTSDDSAVYYCANKLGWFPYWGQGTLVTVSAAKTTAPSVYPLAPVCGDTSGSSVTLGCLVKGYFPEPVTLTWNSGSLSSG 165 (227)
T ss_dssp CCGGGCEEEEEEEEETTEEEECCCEEEEECSSCCBCCEEEEECCCC------CEEEEEEEEEEBSSCCEEEEGGGTBCTT
T ss_pred CCcccCEEEEEEECCCCceEEcCcEEEEEcCCCCCCCEEEEecCCccccCCCcEEEEEEeecEeCCCeEEEEecCCCcCC
Confidence 99999999999999864321 2245788875 4555543333456789999999999985 766 999999988642
Q ss_pred cCCceEEEEeC---CeEEEEEcccCccCceeEEEEEEcCCcceEEEEEEEEecCCCCC
Q psy7042 226 SDDRFKFTVLD---DYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPP 280 (2245)
Q Consensus 226 ~~~~~~~~~~~---~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~ 280 (2245)
......+...+ ..+.|.|.++..+| |.|+|.|.|..+.....+.+.+.++|..|
T Consensus 166 ~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~~~~~~~p~~~ 222 (227)
T 1mju_H 166 VHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRGPTIKP 222 (227)
T ss_dssp EEECCCEEETTEEEEEEEEEECTTTTTT-SCCEEEEEEGGGTEEEEEECCCCCC----
T ss_pred cEECCceecCCeEEEEEEEEEchhhcCC-CeEEEEEEECCCCcceEEEeCCCCCCCCC
Confidence 11000011111 23479999998888 99999999988877777778777776544
No 280
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.67 E-value=1.7e-16 Score=179.30 Aligned_cols=170 Identities=15% Similarity=0.219 Sum_probs=122.1
Q ss_pred CcceEEeCCCeEEEEEEEeeec--CCceEEEEC--Ceecc----------------CCCeEEEEEc--CcEEEEEEeeec
Q psy7042 97 LKDLVVPLGKLLTLQCEATGTP--VPKCRWLRN--GREIS----------------SGARYRVETA--GGVFRLHFNEVT 154 (2245)
Q Consensus 97 ~~~~~v~~G~~v~L~C~~~g~p--~~~i~W~~~--g~~l~----------------~~~~~~~~~~--~~~~~L~i~~~~ 154 (2245)
|..+.+.+|++++|.|.+.+.| .+.|.|+|+ |..+. ..+|+.+..+ ++..+|.|.+++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 86 (210)
T 3d9a_H 7 SGPSLVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVT 86 (210)
T ss_dssp ESCSEECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CCCEEecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCCC
Confidence 4557889999999999998865 478999985 32211 1357777653 356789999999
Q ss_pred cCCCeEEEEEEEcCcccceeEEEEEecC----CCeeecCCCceEEcCCCeEEEEEEEecC-CCc-eEEEeeCceeeecCC
Q psy7042 155 DVDNGDYTCEAYNSVGFAHTSSRVKIGT----PPRIDRMPNALYIPEGDNTKVKIFYAGD-QPM-EVSLTKNGRVVQSDD 228 (2245)
Q Consensus 155 ~~d~G~Y~C~a~n~~g~~~~~~~l~V~~----~P~~~~~~~~~~v~~G~~~~l~C~~~g~-p~~-~i~W~~~g~~l~~~~ 228 (2245)
.+|+|.|+|.|.|.. .....+.|.|.. +|.+...+....+.+|+.++|.|.+.|. |.| .|+|+++|..+....
T Consensus 87 ~~D~G~Y~C~~~~~~-~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~ 165 (210)
T 3d9a_H 87 TEDTATYYCANWDGD-YWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHT 165 (210)
T ss_dssp GGGCEEEEEEETTSS-CBCCCEEEEECCCCCBCCEEEEECCTTSCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEE
T ss_pred cccCEEEEEEEecCc-ccccceEEEeccCCCCCCEEEEecCCcccccCCcEEEEEEEeeEecCCcEEEEeeCCcccceEE
Confidence 999999999999864 222345677763 4666554444557889999999999986 877 999999988642111
Q ss_pred ceEEEEeC---CeEEEEEcccCccCceeEEEEEEcCCcceEEE
Q psy7042 229 RFKFTVLD---DYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGT 268 (2245)
Q Consensus 229 ~~~~~~~~---~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 268 (2245)
...+...+ ....|.|.++..+| |.|+|.|.|..|.....
T Consensus 166 ~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~ 207 (210)
T 3d9a_H 166 FPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVD 207 (210)
T ss_dssp CCCEEETTEEEEEEEEEEEGGGTTT-SCCEEEEEEGGGTEEEE
T ss_pred cCCccCCCcEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCcccc
Confidence 10111111 13469999988877 99999999998875443
No 281
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.67 E-value=2.1e-16 Score=180.38 Aligned_cols=175 Identities=14% Similarity=0.171 Sum_probs=125.3
Q ss_pred CcceEEeCCCeEEEEEEEeeec--CCceEEEECC--ee---c----------------cCCCeEEEEEc--CcEEEEEEe
Q psy7042 97 LKDLVVPLGKLLTLQCEATGTP--VPKCRWLRNG--RE---I----------------SSGARYRVETA--GGVFRLHFN 151 (2245)
Q Consensus 97 ~~~~~v~~G~~v~L~C~~~g~p--~~~i~W~~~g--~~---l----------------~~~~~~~~~~~--~~~~~L~i~ 151 (2245)
|..+.+.+|++++|.|.+.+.| .+.|.|+|++ .. + ...+|+.+..+ .+..+|.|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 86 (222)
T 1q9r_B 7 SGGGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMN 86 (222)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEEC
T ss_pred CCceeEcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEEC
Confidence 3456789999999999998765 6789999843 21 1 01347777654 356789999
Q ss_pred eeccCCCeEEEEEEEcCcc-----cceeEEEEEecC----CCeeecCCCceEEcCCCeEEEEEEEecC-CCc-eEEEeeC
Q psy7042 152 EVTDVDNGDYTCEAYNSVG-----FAHTSSRVKIGT----PPRIDRMPNALYIPEGDNTKVKIFYAGD-QPM-EVSLTKN 220 (2245)
Q Consensus 152 ~~~~~d~G~Y~C~a~n~~g-----~~~~~~~l~V~~----~P~~~~~~~~~~v~~G~~~~l~C~~~g~-p~~-~i~W~~~ 220 (2245)
+++.+|+|.|.|.|.|..+ .....+.|.|.. +|.+...+....+.+|+.++|.|.+.|. |.| .|+|+++
T Consensus 87 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~ 166 (222)
T 1q9r_B 87 TLRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSG 166 (222)
T ss_dssp SCCGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEECCCSCCCCSSEEEEEEEEEEEBSSCCEEEEGGG
T ss_pred cCCcccCeEEEEEEeccCCcccceEeCCceEEEeccCCCCCCeEEEccccccccCCCcEEEEEEEccEECCCCEEEEecC
Confidence 9999999999999998765 222345777764 4666544433446789999999999985 888 9999999
Q ss_pred ceeeecCCceEEEEeC---CeEEEEEcccCccCceeEEEEEEcCCcceEEEEEEE
Q psy7042 221 GRVVQSDDRFKFTVLD---DYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTIN 272 (2245)
Q Consensus 221 g~~l~~~~~~~~~~~~---~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 272 (2245)
|..+...........+ ..+.|.|.++..+| |.|+|.|.|..|.......+.
T Consensus 167 g~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~~~~~~~i~ 220 (222)
T 1q9r_B 167 SLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIV 220 (222)
T ss_dssp TBCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEEECC
T ss_pred CeEcceEeccccccCCcEEEEEEEEECchhcCC-CeEEEEEEccCCCCcEEEecc
Confidence 9875321110111111 12368999999999 999999999998765555443
No 282
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=99.67 E-value=3.3e-16 Score=177.53 Aligned_cols=200 Identities=21% Similarity=0.215 Sum_probs=149.9
Q ss_pred ecCCCCCcccEEeeeeCceEEEEecCCCCCCCCccceEEEeeeecCCCceEEecceeeeceEEEecC-CCCceeeEEEEE
Q psy7042 899 LDRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFVRVRNL-AIGSTYEFRVMA 977 (2245)
Q Consensus 899 ~~~P~~p~~l~~~~~~~~~~~l~W~~p~~~~g~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~i~~L-~p~~~y~~~v~a 977 (2245)
..+|++|.+|.+.....+++.|+|+++.+.++ ..+|.|+++......+...........+.|.+| .+++.|.|+|.|
T Consensus 5 g~pP~~P~~l~~~~~~~~sv~l~W~~p~~~~~--~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~t~Y~~~V~A 82 (215)
T 1bqu_A 5 GLPPEKPKNLSCIVNEGKKMRCEWDGGRETHL--ETNFTLKSEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEA 82 (215)
T ss_dssp CCCCCCCEEEEEEEETTSCCEEEEECCSCCSS--CCEEEEEEEETTEECCCEECCSSCTTEEECSSCCCTTSCEEEEEEE
T ss_pred CCCCCCCEeeEeEECCCCcEEEEcCCCCCCCC--CceEEEEEEEcCCCccccccccCCcceEEEcCCccccccEEEEEEE
Confidence 36899999999998888999999999987653 479999998654332222233345678999999 999999999999
Q ss_pred EeccccCCCccccCccccc-CCCCCCCCCCCCeeEee--cCCeEEEEecCCCCCCCCccceEEEEEEecCCccceecccc
Q psy7042 978 ENQYGLSKPALTIDPIKAK-HPFDVPGAPGAPKGVDS--TEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMA 1054 (2245)
Q Consensus 978 ~n~~g~~~~s~~~~~~~~~-t~~~~p~~p~~~~~~~~--~~~~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~ 1054 (2245)
.|..|.+... ...+. .....|.+|.++.+... +.+++.|+|++|...++ ++.+|.|+|+..+...|......
T Consensus 83 ~n~~G~~~s~----~~~~~~~~~~~p~pP~~~~~~~~~~~~~sv~l~W~~p~~~~~-~i~~Y~v~y~~~~~~~~~~~~~~ 157 (215)
T 1bqu_A 83 ENALGKVTSD----HINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSV-IILKYNIQYRTKDASTWSQIPPE 157 (215)
T ss_dssp EETTEEEECC----CEEECGGGSEECCCCEEEEEECC--CCSCEEEEEECCGGGGT-SCEEEEEEEEETTCSSCEECCGG
T ss_pred EecccCccCC----cEEecccccCcCCCCCceEEEEecCCCceEEEEEeCCCCCCc-ceEEEEEEEccCCCCCceEeccc
Confidence 9999987532 22222 22346778888888764 77999999999887654 68999999998876667655322
Q ss_pred ccCCcceeEEEEeecccccCCccCchhhhhhhhhcccccccccccCCcEEEEEEEEEecCCCCCCCCCCcceeecCCCCC
Q psy7042 1055 HIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSDIIMCCAPPCA 1134 (2245)
Q Consensus 1055 ~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~v~A~n~~G~~~~s~~~~~~~~~~~p~~ 1134 (2245)
........ ++|.+|.+++.|.|+|+|.|..|.|.+|..+......+.+.+
T Consensus 158 ~~~~~~~~------------------------------~~i~~L~p~t~Y~~~V~A~n~~g~g~~S~~S~~~~~~T~~~~ 207 (215)
T 1bqu_A 158 DTASTRSS------------------------------FTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDR 207 (215)
T ss_dssp GGCSCCSE------------------------------EEECSCCSSEEEEEEEEEEETTSCSCCCCCCCCEEEEECCCH
T ss_pred cccCccce------------------------------EEeCCCCCCCEEEEEEEEccCCCCCccCCCCCcccccccccC
Confidence 11111111 269999999999999999999999998887777666665544
Q ss_pred C
Q psy7042 1135 P 1135 (2245)
Q Consensus 1135 p 1135 (2245)
|
T Consensus 208 P 208 (215)
T 1bqu_A 208 P 208 (215)
T ss_dssp H
T ss_pred C
Confidence 4
No 283
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.67 E-value=5e-17 Score=187.77 Aligned_cols=179 Identities=11% Similarity=0.178 Sum_probs=129.7
Q ss_pred CCceecCCcceEEeCCCeEEEEEEEeeecC-C-ceEEEECC--eec------------cCCCeEEEEEcCcEEEEEEeee
Q psy7042 90 KPDFIVPLKDLVVPLGKLLTLQCEATGTPV-P-KCRWLRNG--REI------------SSGARYRVETAGGVFRLHFNEV 153 (2245)
Q Consensus 90 ~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~-~-~i~W~~~g--~~l------------~~~~~~~~~~~~~~~~L~i~~~ 153 (2245)
.+.++. |..+.+.+|++++|.|.+.+.+. + .|.|+|++ ..+ ....|+.+...++..+|.|.++
T Consensus 20 ~~~v~~-p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 98 (234)
T 2j6e_L 20 QSVLTQ-PPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGL 98 (234)
T ss_dssp CCCCBC-CSCCCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESC
T ss_pred ccEEeC-CCcEEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCC
Confidence 344555 77788999999999999987543 4 69999963 222 1135777776677778999999
Q ss_pred ccCCCeEEEEEEEcCccc---ceeEEEEEec----CCCeeecCCCceEEcCCCeEEEEEEEecCC-C-ceEEEeeCceee
Q psy7042 154 TDVDNGDYTCEAYNSVGF---AHTSSRVKIG----TPPRIDRMPNALYIPEGDNTKVKIFYAGDQ-P-MEVSLTKNGRVV 224 (2245)
Q Consensus 154 ~~~d~G~Y~C~a~n~~g~---~~~~~~l~V~----~~P~~~~~~~~~~v~~G~~~~l~C~~~g~p-~-~~i~W~~~g~~l 224 (2245)
+.+|+|.|+|.|.|..+. ....+.|.|. .+|.+...+....+.+|+.++|.|.+.|.+ + +.|+|+|||..+
T Consensus 99 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l 178 (234)
T 2j6e_L 99 RSEDEADYYCATWDDSLSAVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFFPGAVTVAWKADGAPV 178 (234)
T ss_dssp CSTTCSEEEEEEEETTTTEEEECCCBCCCBCCCCCCCCCCCEECCCHHHHTTSCCCEEECCCBCSSCCCEEEEEETTEEC
T ss_pred CHHHCEEEEEEEEcCCcceeEecCCEEEEEecCCCCCCcccccCCChhHhcCCceEEEEEEEEEcCCceEEEEEECCEEC
Confidence 999999999999998872 2234567773 456665544444445799999999998854 3 489999999988
Q ss_pred ecCCceE-EE--Ee---CCeEEEEEcccCccCceeEEEEEEcCCcceEEEE
Q psy7042 225 QSDDRFK-FT--VL---DDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTF 269 (2245)
Q Consensus 225 ~~~~~~~-~~--~~---~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 269 (2245)
..+.... .. .. ...+.|.|.++..+|+|.|+|.|.|..+....++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~ 229 (234)
T 2j6e_L 179 KAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTV 229 (234)
T ss_dssp CSSEEECCCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTBCCCEEE
T ss_pred CCCccccCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCCceEEec
Confidence 6442100 00 00 1235799999999999999999999987654443
No 284
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.67 E-value=2.9e-16 Score=173.07 Aligned_cols=176 Identities=13% Similarity=0.102 Sum_probs=128.6
Q ss_pred CCCceeccCCceEEcCCCeEEEEEEecCcCCCeEEEeeCCEeccCCceEEEEecCcEEEEEEeeeccCCCeEEEEEEecC
Q psy7042 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNS 1775 (2245)
Q Consensus 1696 ~~p~~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~ 1775 (2245)
.+|.+...+.. .+.+|++++|.|.+.+. .+.+.|+|+|..+..... ..........|.|.+++.+|+|.|+|.+.|.
T Consensus 3 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~~~-~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 79 (188)
T 1oll_A 3 PKPFIWAEPHF-MVPKEKQVTICCQGNYG-AVEYQLHFEGSLFAVDRP-KPPERINKVKFYIPDMNSRMAGQYSCIYRVG 79 (188)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCTT-CCEEEEEETTEEEEEECC-SSCTTCCEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCEEEeecCC-cCCCCCCEEEEEecCCC-CCEEEEEECCCccccccc-ccCCCcceeEEEeCcCCcccCeEEEEEecCC
Confidence 46777777766 79999999999999764 468999999987642100 0011234567999999999999999999887
Q ss_pred ceee--EEEEEEEecC---CCccccCCCceEEcCCCeEEEEEEEeccCCcEEEEEECCEEeecCCceEEEEcCCeEEEEE
Q psy7042 1776 VGFA--HTSSRVKIGT---PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFI 1850 (2245)
Q Consensus 1776 ~g~~--~~~~~l~V~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~l~i 1850 (2245)
.+.. ...+.|.|.. +|.+...+ ...+.+|++++|.|.+.+. ++.+.|+|+|..+.. ..........|.|
T Consensus 80 ~~~~~~s~~~~l~V~~~~~~p~i~~~p-~~~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~----~~~~~~~~~~L~I 153 (188)
T 1oll_A 80 ELWSEPSNLLDLVVTEMYDTPTLSVHP-GPEVISGEKVTFYCRLDTA-TSMFLLLKEGRSSHV----QRGYGKVQAEFPL 153 (188)
T ss_dssp TEECCCCCCEEEEEESCSCCCEEEEES-CSEEETTCEEEEEEECSSS-CSEEEEEEESSSCEE----EEEECSSEEEEEE
T ss_pred CCCCCCCCceEEEecccCCCCeEEECC-CCccccCCEEEEEEEcCCC-CCEEEEEECCccccc----cccCCCceeEEEE
Confidence 5533 3446777754 56665444 4568899999999998764 569999999976643 1223456678999
Q ss_pred cccCcccceEEEEEEEcCCe---eeEEEEEEEE
Q psy7042 1851 KEIRKEDAGDYTVNLSNSSG---SVSGTFTINI 1880 (2245)
Q Consensus 1851 ~~~~~~d~G~Y~C~a~n~~g---~~~~~~~l~v 1880 (2245)
.++..+|+|.|+|.|.|... ..+..+.|.|
T Consensus 154 ~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V 186 (188)
T 1oll_A 154 GPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLV 186 (188)
T ss_dssp EECCGGGCEEEEEECEEETTEECCCCCCEEEEE
T ss_pred CCCCcCCCcEEEEEEEcCCCcCCCCCCcEEEEe
Confidence 99999999999999998641 2334455554
No 285
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.67 E-value=8.1e-16 Score=166.11 Aligned_cols=156 Identities=12% Similarity=0.071 Sum_probs=118.1
Q ss_pred eEEeCCCeEEEEEEEeeecCC--ceEEEECCeeccCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEEcCcccceeEEE
Q psy7042 100 LVVPLGKLLTLQCEATGTPVP--KCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSR 177 (2245)
Q Consensus 100 ~~v~~G~~v~L~C~~~g~p~~--~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 177 (2245)
+.+..|++++|+|.+ |.|.| .|+|++.+..+ .+..+. .+...|.|.+++.+|+|.|.|.|.|..+.....+.
T Consensus 17 v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l---~~~~~~--~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~ 90 (210)
T 1gsm_A 17 VAVALGASRQLTCRL-ACADRGASVQWRGLDTSL---GAVQSD--TGRSVLTVRNASLSAAGTRVCVGSCGGRTFQHTVQ 90 (210)
T ss_dssp EEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTT---CCEEEE--SSEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred eEEeCCCCEEEEEEC-CCCCCCcceEEeeccccc---CcEEec--CCccEEEECccCcccCceEEEEEEeCCCceEEEEE
Confidence 689999999999999 88888 99999966555 233332 44457999999999999999999999988888999
Q ss_pred EEecCCCeeecCCCceEEcCCCeEEEEEEEecC-CC----ceEEEeeCceeeecCCceE--EEE--------e----CCe
Q psy7042 178 VKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGD-QP----MEVSLTKNGRVVQSDDRFK--FTV--------L----DDY 238 (2245)
Q Consensus 178 l~V~~~P~~~~~~~~~~v~~G~~~~l~C~~~g~-p~----~~i~W~~~g~~l~~~~~~~--~~~--------~----~~~ 238 (2245)
|+|..+|........ .+.+|+.+ |.|.+.|. |. +.|.|||||..|....... ... . .-.
T Consensus 91 ltV~~~P~~~~i~~~-~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vt 168 (210)
T 1gsm_A 91 LLVYAFPNQLTVSPA-ALVPGDPE-VACTAHKVTPVDPNALSFSLLVGGQELEGAQALGPEVQEEEEEPQGDEDVLFRVT 168 (210)
T ss_dssp EEEEBCCSEEEEESS-SBCTTCCE-EEEEEEEEBCCCTTTEEEEEEETTEECTTCEECCCEEEECTTCCSSCCCCCEEEE
T ss_pred EEEEecCCCcEEccc-eEEeCCce-EEEEeCCCCCCCCCCcEEEEEECCEEcccccccccceecccccccCCcceEEEEE
Confidence 999999975543222 66778888 99999885 64 4899999999985432111 100 0 112
Q ss_pred EEEEEcccCccCceeEEEEEEcCCc
Q psy7042 239 IIIFIKEIRKEDAGDYTVNLSNSSG 263 (2245)
Q Consensus 239 ~~L~i~~~~~~d~G~Y~C~a~n~~g 263 (2245)
++|.+.....+|.+.|+|+|.+..-
T Consensus 169 s~~~~~~~~~D~~~~~tC~a~~~L~ 193 (210)
T 1gsm_A 169 ERWRLPPLGTPVPPALYCQATMRLP 193 (210)
T ss_dssp EEEECCCCCSSCCSEEEEEEEEEET
T ss_pred EEEeecCCcccCCceEEEEEEeeCC
Confidence 3466667777778899999998763
No 286
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.67 E-value=2.4e-16 Score=169.94 Aligned_cols=154 Identities=16% Similarity=0.233 Sum_probs=117.5
Q ss_pred CcceEEeCCCeEEEEEEEe--eecCCceEEEE--CCeec----------cCCCeEEEEEcCcEEEEEEeeeccCCCeEEE
Q psy7042 97 LKDLVVPLGKLLTLQCEAT--GTPVPKCRWLR--NGREI----------SSGARYRVETAGGVFRLHFNEVTDVDNGDYT 162 (2245)
Q Consensus 97 ~~~~~v~~G~~v~L~C~~~--g~p~~~i~W~~--~g~~l----------~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 162 (2245)
...+.+.+|++|+|.|... +.|.+.|.|+| ++..| ..+.|+.+..++ +|.|.+++.+|+|.|+
T Consensus 6 ~~~v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ng---sL~I~~v~~~DsG~Y~ 82 (182)
T 1hnf_A 6 ALETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNG---TLKIKHLKTDDQDIYK 82 (182)
T ss_dssp CEEEEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTTS---CEEECSCCGGGCEEEE
T ss_pred ccEEEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCCC---CEEECCCChhhCEEEE
Confidence 3456789999999999542 34567899999 98877 345677777544 4999999999999999
Q ss_pred EEEEcCccccee--EEEEEecCC---CeeecCCCceEEcCCCeEEEEEEEecCCCceEEEeeCceeeecCCceEEEEeCC
Q psy7042 163 CEAYNSVGFAHT--SSRVKIGTP---PRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDD 237 (2245)
Q Consensus 163 C~a~n~~g~~~~--~~~l~V~~~---P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~ 237 (2245)
|.|.|..|.... .+.|.|..+ |.+.. .+..++|.|.+.+.|.+.|.|+++|..+ ... ..
T Consensus 83 c~~~n~~g~~~~~~~~~L~V~~~~~~P~i~~--------~~~~v~L~C~~~~~p~~~~~W~~~g~~l-~~~-------~~ 146 (182)
T 1hnf_A 83 VSIYDTKGKNVLEKIFDLKIQERVSKPKISW--------TCINTTLTCEVMNGTDPELNLYQDGKHL-KLS-------QR 146 (182)
T ss_dssp EEEEETTSCEEEEEEEEEEEECCCCCCEEEE--------ETTTTEEEEECSSCSSCEEEEEESSCEE-EEE-------SS
T ss_pred EEEEeCCCceeEEEEEEEEEcCcCCCCEEEE--------ccCcEEEEeEccCCCCCEEEEEECCEEC-CCC-------Cc
Confidence 999998887643 567888764 33322 3447999999999999999999999988 211 11
Q ss_pred eEEEEEcccCccCceeEEEEEEcCCcceEEEEEEE
Q psy7042 238 YIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTIN 272 (2245)
Q Consensus 238 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 272 (2245)
.|.+.. ..+|+|.|+|.|.|..|..+..+.+.
T Consensus 147 --~i~~~~-~~~d~G~Y~C~a~N~~~~~~s~~~~~ 178 (182)
T 1hnf_A 147 --VITHKW-TTSLSAKFKCTAGNKVSKESSVEPVS 178 (182)
T ss_dssp --CEEEEC-CSCEEEEEEEEEECSSCEEEEEEEEE
T ss_pred --EEEEec-ccCCCcEEEEEEEeCCCCcEEcceec
Confidence 233333 47899999999999999888777664
No 287
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.67 E-value=1.9e-16 Score=179.68 Aligned_cols=178 Identities=18% Similarity=0.241 Sum_probs=131.0
Q ss_pred eeccCCceEEcCCCeEEEEEEecCcCCCeEEEeeCC--Eec------------cCCceEEEEecCcEEEEEEeeeccCCC
Q psy7042 1700 FIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNG--REI------------SSGARYRVETAGGVFRLHFNEVTDVDN 1765 (2245)
Q Consensus 1700 ~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~~--~~l------------~~~~~~~~~~~~~~~~L~i~~v~~~d~ 1765 (2245)
+...+..+.+.+|+++.|.|.+.+.|.+.+.|+|++ ..+ ....++.+...+...+|.|.+++.+|+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 83 (213)
T 3d9a_L 4 LTQSPATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDF 83 (213)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EEeCCccEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhhC
Confidence 344566788999999999999999988899999853 211 112577777677788899999999999
Q ss_pred eEEEEEEecCceeeEE-EEEEEecC---CCccccCCCceEEcCCCeEEEEEEEec-cCCc-EEEEEECCEEeecCCceEE
Q psy7042 1766 GDYTCEAYNSVGFAHT-SSRVKIGT---PPRIDRMPNALYIPEGDNTKVKIFYAG-DQPM-EVSLTKNGRVVQSDDRFKF 1839 (2245)
Q Consensus 1766 G~Y~C~~~n~~g~~~~-~~~l~V~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~v~W~~~g~~l~~~~~~~~ 1839 (2245)
|.|+|.+.|..+.... ...|.|.. +|.+...+.......|+.+.|.|.+.| .|.+ .+.|+|+|+.+........
T Consensus 84 G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~ 163 (213)
T 3d9a_L 84 GMYFCQQSNSWPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSW 163 (213)
T ss_dssp EEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEEEE
T ss_pred EEEEEeeecCCcceeCCCEEEEEecCCCCceeEeECCChhhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCcceeeecC
Confidence 9999999998765433 34677765 666655443333457899999999998 5655 8999999998865411111
Q ss_pred E--EcCC-----eEEEEEcccCcccceEEEEEEEcCCeeeEEEEE
Q psy7042 1840 T--VLDD-----YIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFT 1877 (2245)
Q Consensus 1840 ~--~~~~-----~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 1877 (2245)
. ...+ ...|.|.++..+|.|.|+|.|.|..........
T Consensus 164 ~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~ 208 (213)
T 3d9a_L 164 TDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKS 208 (213)
T ss_dssp CCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSSCEEEE
T ss_pred CCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCCCceEEE
Confidence 0 0111 248999999999999999999998776543333
No 288
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=99.67 E-value=1.5e-15 Score=171.48 Aligned_cols=184 Identities=20% Similarity=0.304 Sum_probs=143.3
Q ss_pred CCCCCCCCCeeeeecCCcEEEEeeCCCCC---CCcccccEEEEeeeCCCCCeE-EEceeeeeeEEEecCCCCCEEEEEEE
Q psy7042 668 DRPDPPQFPTVEDIGHDSLALVWRAPIWD---GGSNITNYIVEKREHPMSSWI-RVGNTRFTTMAITGLSPGHQYEFRVY 743 (2245)
Q Consensus 668 ~~P~~p~~~~~~~~~~~si~lsW~~p~~~---~~~~~~~y~v~~~~~~~~~w~-~~~~~~~~~~~i~~L~p~t~y~~~v~ 743 (2245)
.||.+|.++.+..++.+++.|+|.+|..+ .++.+.+|.|+|+......|. .........+.+.+|.|++.|.|+|.
T Consensus 3 ~P~~~P~~l~~~~~~~~si~l~W~~p~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~ 82 (211)
T 3p4l_A 3 LPMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANATTLSYLVTGLKPNTLYEFSVM 82 (211)
T ss_dssp CCCCCCEEEEEEECSSSCEEEEEECTTSCTTCCCCSSCEEEEEEEECC---CCCEEEEESSSEEEECSCCTTCEEEEEEE
T ss_pred CCCCCCCCEEEEecCCCeEEEEEeCCCCCcccccCCCcEEEEEEEECCCCcceEEEeCCCceEEEecCcCCCCEEEEEEE
Confidence 46788999999999999999999986533 246889999999876544332 22244456899999999999999999
Q ss_pred EEecccCCCCCCCCccEEecCccccccccccccccCCCceeecccccccccCCceEEEEeeeccCccccccccceecccc
Q psy7042 744 AENVYGRSDPSTTSDLITTKDTFKKQIKKRQYDFDETGKKIRGKADEKVSDYDQYVFDIYSKYVPQPVDIKTSSVYDHYD 823 (2245)
Q Consensus 744 a~n~~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 823 (2245)
|.|..|.+.+|....+.+
T Consensus 83 A~n~~g~~~~S~~~~~~t-------------------------------------------------------------- 100 (211)
T 3p4l_A 83 VTKGRRSSTWSMTAHGTT-------------------------------------------------------------- 100 (211)
T ss_dssp EEETTEECCCCCCEEEEC--------------------------------------------------------------
T ss_pred EEcCCCCCccceeEeeec--------------------------------------------------------------
Confidence 999999887765322211
Q ss_pred cccccccCceeEEEEeeecccCCeeEEEeeccCCchhhhhhheeeeeeeccCCCceEeecccccCCcceEEEEEEecCCC
Q psy7042 824 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFEVLDRPH 903 (2245)
Q Consensus 824 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 903 (2245)
..+.|.
T Consensus 101 --------------------------------------------------------------------------~~~~P~ 106 (211)
T 3p4l_A 101 --------------------------------------------------------------------------FELVPT 106 (211)
T ss_dssp --------------------------------------------------------------------------CCCCCC
T ss_pred --------------------------------------------------------------------------ccCCCC
Confidence 113454
Q ss_pred -CCcccEEeee--eCceEEEEecCCCCCCCCccceEEEeeeecCCC---ceEEecceeeeceEEEecCCCCceeeEEEEE
Q psy7042 904 -PPENLHADEF--AGDSLTLYWTPPRDNGGSEITNYVVEKKDYNST---VWTKVSSYVTTPFVRVRNLAIGSTYEFRVMA 977 (2245)
Q Consensus 904 -~p~~l~~~~~--~~~~~~l~W~~p~~~~g~~i~~y~i~~~~~~~~---~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a 977 (2245)
+|.++.+... +.+++.|+|.+|.+.+| .+.+|.|+|...... .|.........+.+.|.+|.|++.|.|+|+|
T Consensus 107 ~~P~~~~~~~~~~s~~sv~l~W~~p~~~~g-~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A 185 (211)
T 3p4l_A 107 SPPKDVTVVSKEGKPKTIIVNWQPPSEANG-KITGYIIYYSTDVNAEIHDWVIEPVVGNRLTHQIQELTLDTPYYFKIQA 185 (211)
T ss_dssp SCCEEEEEEEETTEEEEEEEEEECCTTCCS-CCCEEEEEEESCTTSCGGGSEEEEEESSCSEEEECCCCTTCEEEEEEEE
T ss_pred CCCcceEEEecCCCCCEEEEEECCCCCCCC-CEEEEEEEEEECCCCCCCceEEEEecCCeeEEEEcCCCCCCEEEEEEEE
Confidence 8899988877 57899999999987666 999999999976544 3444444556789999999999999999999
Q ss_pred EeccccCCCcc
Q psy7042 978 ENQYGLSKPAL 988 (2245)
Q Consensus 978 ~n~~g~~~~s~ 988 (2245)
.|..|.|+++.
T Consensus 186 ~n~~G~g~~S~ 196 (211)
T 3p4l_A 186 RNSKGMGPMSE 196 (211)
T ss_dssp EETTEECCCCC
T ss_pred EcCCccCCCCC
Confidence 99999998873
No 289
>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens}
Probab=99.67 E-value=5.3e-16 Score=184.49 Aligned_cols=270 Identities=17% Similarity=0.164 Sum_probs=160.9
Q ss_pred CCCCCcccEEeeeeCceEEEEecCCCCCCCCccceEEEeeeecCCCceEEecc--eeeeceEEE--ecCCCCceeeEEEE
Q psy7042 901 RPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSS--YVTTPFVRV--RNLAIGSTYEFRVM 976 (2245)
Q Consensus 901 ~P~~p~~l~~~~~~~~~~~l~W~~p~~~~g~~i~~y~i~~~~~~~~~~~~~~~--~~~~~~~~i--~~L~p~~~y~~~v~ 976 (2245)
...+|+++++... +.++.|+|++|.+.++ .+. |.|+|+..+...|..+.. ....+.+.+ .+|.+++.|.++|+
T Consensus 3 ~l~~P~nv~~~~~-n~~~iL~W~pp~~~~~-~v~-Y~V~y~~~~~~~W~~~~~c~~~~~~~c~lt~~~l~~~~~Y~~rV~ 79 (306)
T 3s98_A 3 PLKSPQKVEVDII-DDNFILRWNRSDESVG-NVT-FSFDYQKTGMDNWIKLSGCQNITSTKCNFSSLKLNVYEEIKLRIR 79 (306)
T ss_dssp -----CCCEEEEE-TTEEEEECC---------CE-EEEEEEESSCSSCEECTTCSSBSSSEEECCC---CTTSCEEEEEE
T ss_pred CCCCCcEeEEEEE-CCeEEEEEcCCCCCCC-CeE-EEEEEEECCCCCcEECCCccCCCCCEEEccccccCCCCcEEEEEE
Confidence 4568999999876 5567899999876543 666 999999987788987532 233444444 45789999999999
Q ss_pred EEeccccCCCccccCcccccCCC-CCCCCCCCCeeEeecCCeEEEEecCCCCCC-----CCccceEEEEEEecCCcccee
Q psy7042 977 AENQYGLSKPALTIDPIKAKHPF-DVPGAPGAPKGVDSTEDSISLVWSKPRHDG-----GSPIQRYIVEKRLISDDKWIK 1050 (2245)
Q Consensus 977 a~n~~g~~~~s~~~~~~~~~t~~-~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~-----~~~i~~y~v~~~~~~~~~~~~ 1050 (2245)
|.| .|.|+++.. ..+.+.. ..+++|. +.+.. ..++|.|+|.||...+ .+.+.+|.|.|+..+......
T Consensus 80 A~n-~~~S~~s~~---~~f~~~~~~~~~pP~-v~~~~-~~~si~v~w~P~~~~~~~~~~~g~~l~Y~v~y~~~~~~~~~~ 153 (306)
T 3s98_A 80 AEK-ENTSSWYEV---DSFTPFRKAQIGPPE-VHLEA-EDKAIVIHISPGTKDSVMWALDGLSFTYSLVIWKNSSGVEER 153 (306)
T ss_dssp EEC-SSCEEEEEC---CCBCHHHHCBCCCCE-EEEEE-CSSCEEEEEECC---CCCC-----CCEEEEEEEETTTCCCEE
T ss_pred EEe-CCcCCCEee---eeEechhhCccCCCe-EEEEE-cCCEEEEEEECCCCCCcceeccCCcEEEEEEEEECCCCCeEE
Confidence 999 887766532 2222222 2345554 66554 4468999999765321 246889999998766443111
Q ss_pred ccccccCCcceeEEEEeecccccCCccCchhhhhhhhhcccccccccccCCcEEEEEEEEEe--cCCCCCCCCCCcceee
Q psy7042 1051 ASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVN--AAGQGPWSSSSDIIMC 1128 (2245)
Q Consensus 1051 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~v~A~n--~~G~~~~s~~~~~~~~ 1128 (2245)
.. . . . +.++|.+|.+++.|.|+|+|.| ..|.|++|....+.+.
T Consensus 154 ~~--~-~--~------------------------------~~~~l~~L~p~t~Y~~~V~A~~~~~~g~g~~S~~~~~~T~ 198 (306)
T 3s98_A 154 IE--N-I--Y------------------------------SRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTT 198 (306)
T ss_dssp EE--E-E--C------------------------------TEEEECSCCTTCEEEEEEEEEEGGGTEECCCCCCEEEECC
T ss_pred Ee--c-c--c------------------------------ceEEEccCCCCCeEEEEEEEEEccCCCCCCCCCcEeeEec
Confidence 10 0 0 0 0126999999999999999999 6787777654333332
Q ss_pred cCCCCCCccccCCCceeEEEEcCCeEEEEEEeeecCCCcceEEeCCeecCCCCcEEEEEccceEEEEecCccccccceeE
Q psy7042 1129 CAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATDSGSY 1208 (2245)
Q Consensus 1129 ~~~p~~p~~~~~~~~~~~~v~~~~~~~l~~~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y 1208 (2245)
..
T Consensus 199 ~~------------------------------------------------------------------------------ 200 (306)
T 3s98_A 199 VE------------------------------------------------------------------------------ 200 (306)
T ss_dssp SC------------------------------------------------------------------------------
T ss_pred CC------------------------------------------------------------------------------
Confidence 11
Q ss_pred EEEEEcCCcceeEEEEEEEECCCCCCCCCceeeeccCCcEEEEecCCCCCCCcceeeeEEEEe--------eccccceEE
Q psy7042 1209 TIQLVNTVGSDSASCKVYVVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKY--------ESATGFWSK 1280 (2245)
Q Consensus 1209 ~~~a~n~~g~~~~s~~~~v~~~p~~p~~~~~~~~~~~~s~~l~W~~p~~~~g~~i~~Y~v~~~--------~~~~~~~~~ 1280 (2245)
.|.+|+.++.+... .+++.|+|++|.. ++ +|.+++. ......|..
T Consensus 201 ---------------------~p~~~P~~v~~~~~-~~s~~l~W~~p~~-~~----~~~v~~~~gy~~~~~~~~~~~W~~ 253 (306)
T 3s98_A 201 ---------------------NELPPPENIEVSVQ-NQNYVLKWDYTYA-NM----TFQVQWLHAFLKRNPGNHLYKWKQ 253 (306)
T ss_dssp ---------------------CSSCCCEEEEEEEE-TTEEEEEEECSSS-SC----EEEEEEEEGGGGSCC----CCCEE
T ss_pred ---------------------CcCCCCceEEEEEe-cCEEEEEeCCCCC-cE----EEEEEEehhhhhccccccccCceE
Confidence 12223344555333 3678899998753 22 3333332 234567875
Q ss_pred cc--cceecceEEecC-CCCCceEEEEEEEeccccCCCCccc
Q psy7042 1281 LS--SFVRSPAYDVFG-LETNRQYRFRVRAENQYGVSEPLEL 1319 (2245)
Q Consensus 1281 ~~--~~~~~~~~~l~~-L~~~t~Y~~~v~A~n~~G~~~~s~~ 1319 (2245)
+. .....+.+.+.+ |.+...|.|+|+|.|..|.|..++.
T Consensus 254 ~~~c~~~~~~~c~~~~~~~~~~~Y~~RV~A~n~~~~s~~s~~ 295 (306)
T 3s98_A 254 IPDCENVKTTQCVFPQNVFQKGIYLLRVQASDGNNTSFWSEE 295 (306)
T ss_dssp CGGGTTBSSSEEEEEGGGSCSSEEEEEEEEECSSCBCCCCCC
T ss_pred CCCceeCCCccccCchhhcccCCEEEEEEEccCCCccccccc
Confidence 42 345667788887 4566699999999999888876543
No 290
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.67 E-value=6.2e-16 Score=177.08 Aligned_cols=178 Identities=13% Similarity=0.152 Sum_probs=124.5
Q ss_pred cCCceEEcCCCeEEEEEEecCcCCC---eEEEeeCCEec-----------cC------CceEEEEe---cCcEEEEEEee
Q psy7042 1703 PLKDLVVPLGKLLTLQCEATGTPVP---KCRWLRNGREI-----------SS------GARYRVET---AGGVFRLHFNE 1759 (2245)
Q Consensus 1703 ~~~~~~~~~G~~v~L~C~~~~~p~~---~v~W~~~~~~l-----------~~------~~~~~~~~---~~~~~~L~i~~ 1759 (2245)
+...+.+.+|++++|.|.+.+.+.+ .|.|+|++... .. ..|..... ..+..+|+|.+
T Consensus 10 P~~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~ 89 (226)
T 4f80_A 10 PSGPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHN 89 (226)
T ss_dssp CSSCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESS
T ss_pred CCCCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEee
Confidence 4455889999999999999766544 69999876321 10 12333322 23577899999
Q ss_pred eccCCCeEEEEEEecCceeeEEEEEEEecCCCccccCCCceEEcCCCeEEEEEEEec-cCCcEEEEEECCEEeecCCceE
Q psy7042 1760 VTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAG-DQPMEVSLTKNGRVVQSDDRFK 1838 (2245)
Q Consensus 1760 v~~~d~G~Y~C~~~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~~v~W~~~g~~l~~~~~~~ 1838 (2245)
++.+|+|.|+|.|.|..|.....+.+.+. +.....+....+.+|+.+.|.|.+.| .|.|.|+|++++..+.......
T Consensus 90 v~~~D~G~Y~C~a~n~~~~~~~~v~~~~~--~~~~~~~~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~~~~~~ 167 (226)
T 4f80_A 90 VTASDSGKYLCYFQDGDFYEKALVELKVA--ALGSDLHVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTVEAP 167 (226)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEE--BCCCCCEEEEEEEETTEEEEEEEEEEEBSCCEEEEECTTSCBCCCEECC
T ss_pred CchHHCeeEEEEEECCCcEEEEEEEEeec--cceecccceeeeccCCceeeEEEeccCCCCCEEEEEECCceEcCCCceE
Confidence 99999999999999988877666555544 33334445667888999999999998 5999999999654332222222
Q ss_pred EEEcC--CeEEEEEcccCcccceEEEEEEEcCCeeeEEEEEEEEeC
Q psy7042 1839 FTVLD--DYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITG 1882 (2245)
Q Consensus 1839 ~~~~~--~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 1882 (2245)
..... ....+.+..+..+|+|.|+|.|.|..|..+..+.|.|.+
T Consensus 168 ~~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~~v~v~e 213 (226)
T 4f80_A 168 VVADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGLEKTASISIAD 213 (226)
T ss_dssp CEECTTSCEEEEEEEEECC----CEEEEEEETTTTEEEEEEECCCT
T ss_pred EEECCCCcEEEEEEEEechhcCcEEEEEEEeCCCCeEEEEEEEECC
Confidence 22222 224455667888999999999999999999999888854
No 291
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.66 E-value=1.4e-16 Score=170.91 Aligned_cols=150 Identities=13% Similarity=0.125 Sum_probs=112.8
Q ss_pred ceEEeCCCeEEEEEEEeeecCCceEEEECCeeccC------------CCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEE
Q psy7042 99 DLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISS------------GARYRVETAGGVFRLHFNEVTDVDNGDYTCEAY 166 (2245)
Q Consensus 99 ~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~------------~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 166 (2245)
.+.+.+|++|+|.|.+.+ |.+.|.|+|++..+.. .+|+.+...++ +|.|.+++.+|+|.|+|.|.
T Consensus 4 ~v~~~~G~~VtL~c~~~~-~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~--sL~I~~v~~~DsG~Y~C~~~ 80 (171)
T 1ccz_A 4 QIYGVVYGNVTFHVPSNV-PLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSG--SLTIYNLTSSDEDEYEMESP 80 (171)
T ss_dssp EEEEETTCCEEECCCCSS-CCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTC--CEEECSCCGGGCEEEEEECT
T ss_pred EEEEEcCCCEEEcCCCCC-CcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCC--eEEECCCChhhCceEEEEEe
Confidence 467899999999999854 8889999998875421 12344432333 59999999999999999999
Q ss_pred cCcccceeEEEEEecCCC---eeecCCCceEEcCCCeEEEEEEEecCCCceEEEeeCceeeecCCceEEEEeCCeEEEEE
Q psy7042 167 NSVGFAHTSSRVKIGTPP---RIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFI 243 (2245)
Q Consensus 167 n~~g~~~~~~~l~V~~~P---~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i 243 (2245)
|..| ...+.|.|..++ .+..... ...|.|.+.|.|.|.|+|+|+|..+...... .|.+
T Consensus 81 n~~~--~~~~~L~V~~~~~~p~i~~~~~--------~~~L~C~~~~~p~p~i~W~~~~~~l~~~~~~---------~l~~ 141 (171)
T 1ccz_A 81 NITD--TMKFFLYVLEMVSKPMIYWECS--------NATLTCEVLEGTDVELKLYQGKEHLRSLRQK---------TMSY 141 (171)
T ss_dssp TCCS--CEEEEEEEECCCCCCEEEEETT--------TTEEEEECSSCSSCEEEEEETTEEEEEESSS---------EEEE
T ss_pred CCCC--cEEEEEEEECcCCCCEEEEecC--------CcEEEEEeCCCCCcEEEEEECCEECcCCcce---------EEEE
Confidence 9887 667788887763 2221111 1379999999899999999999988643321 3334
Q ss_pred cccCccCceeEEEEEEcCCcceEEEEEEE
Q psy7042 244 KEIRKEDAGDYTVNLSNSSGSVSGTFTIN 272 (2245)
Q Consensus 244 ~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 272 (2245)
. ..+|+|.|+|.|.|..|..+.++.|.
T Consensus 142 ~--~~~~~g~Y~C~a~N~~~~~~~~~~l~ 168 (171)
T 1ccz_A 142 Q--WTNLRAPFKCKAVNRVSQESEMEVVN 168 (171)
T ss_dssp E--CSCCSSCEEEEEEETTEEEEEEECCC
T ss_pred e--ccCCCceEEEEEEcccCcccceeEEe
Confidence 3 36799999999999999887776654
No 292
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.66 E-value=1e-15 Score=181.97 Aligned_cols=182 Identities=14% Similarity=0.218 Sum_probs=132.6
Q ss_pred CCcceEEeCCCeEEEEEEEeeec--CCceEEEECC--eecc-----------------CCCeEEEEE--cCcEEEEEEee
Q psy7042 96 PLKDLVVPLGKLLTLQCEATGTP--VPKCRWLRNG--REIS-----------------SGARYRVET--AGGVFRLHFNE 152 (2245)
Q Consensus 96 ~~~~~~v~~G~~v~L~C~~~g~p--~~~i~W~~~g--~~l~-----------------~~~~~~~~~--~~~~~~L~i~~ 152 (2245)
.|..+.+.+|++++|.|.+.+.| .+.|.|+|++ ..+. ..+|+.+.. .++..+|.|.+
T Consensus 28 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 107 (291)
T 2gki_A 28 QSGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSS 107 (291)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEEECS
T ss_pred cCCcEEecCCCCEEEEEeccCCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEEECc
Confidence 34578899999999999998876 5789999953 2110 124565554 24567899999
Q ss_pred eccCCCeEEEEEEEcCc-ccc----eeEEEEEecC----------------CCeeecCCCceEEcCCCeEEEEEEEecCC
Q psy7042 153 VTDVDNGDYTCEAYNSV-GFA----HTSSRVKIGT----------------PPRIDRMPNALYIPEGDNTKVKIFYAGDQ 211 (2245)
Q Consensus 153 ~~~~d~G~Y~C~a~n~~-g~~----~~~~~l~V~~----------------~P~~~~~~~~~~v~~G~~~~l~C~~~g~p 211 (2245)
++.+|+|.|.|.|.|.. |.. ...+.|.|.. ++.+...|..+.+.+|++++|.|.+.+.|
T Consensus 108 v~~~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~ 187 (291)
T 2gki_A 108 LTSEDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSPSSLAVSAGEKVTMSCKSSQSL 187 (291)
T ss_dssp CCGGGCEEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECSCSEEEEETTSCEEEEEEESSCC
T ss_pred CCHHHCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcCCCEEEEcCCCcEEEEEEcCCcc
Confidence 99999999999999875 211 1245688877 34566677788899999999999999888
Q ss_pred Cc------eEEEeeC--cee---eec---------CCceEEEEeCCeEEEEEcccCccCceeEEEEEEcCCcce-EEEEE
Q psy7042 212 PM------EVSLTKN--GRV---VQS---------DDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV-SGTFT 270 (2245)
Q Consensus 212 ~~------~i~W~~~--g~~---l~~---------~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~ 270 (2245)
.+ .+.|||+ |.. +.. ..++.+...+...+|.|.+++.+|+|.|+|.|.|..... ..-..
T Consensus 188 ~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~ 267 (291)
T 2gki_A 188 FNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQSYYHMYTFGSGTK 267 (291)
T ss_dssp EETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEECCCEE
T ss_pred ccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEEECCCCHHHCEEEEEEEccCCceEEcCCEE
Confidence 65 9999996 322 111 345665555666789999999999999999999864322 22345
Q ss_pred EEEecCC
Q psy7042 271 INITGLP 277 (2245)
Q Consensus 271 l~V~~~p 277 (2245)
|.|...+
T Consensus 268 l~v~~~~ 274 (291)
T 2gki_A 268 LEIKHHH 274 (291)
T ss_dssp EEEECC-
T ss_pred EEEEeeE
Confidence 6666544
No 293
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.66 E-value=5.2e-16 Score=180.61 Aligned_cols=174 Identities=16% Similarity=0.182 Sum_probs=128.1
Q ss_pred ceecCCcceEEeCCCeEEEEEEEeeecCCceEEEE----------------CCeeccCC---CeEEEEE-cCcEEEEEEe
Q psy7042 92 DFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLR----------------NGREISSG---ARYRVET-AGGVFRLHFN 151 (2245)
Q Consensus 92 ~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~----------------~g~~l~~~---~~~~~~~-~~~~~~L~i~ 151 (2245)
.++.+|..+.+.+|+.++|.|.+.+.|.+.|.|+| ++...... +|+.+.. .++..+|.|.
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~ 82 (246)
T 4dzb_B 3 VVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVT 82 (246)
T ss_dssp CEEEECSEEEEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEEC
T ss_pred ccEECCcEEEEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEEC
Confidence 46667888899999999999999999999999999 43333322 5777654 3456789999
Q ss_pred eeccCCCeEEEEEEEcCccc----ceeEEEEEecC------CCeee-cCCCceEEcCCCeEEEEEEEecCCCc--eEEEe
Q psy7042 152 EVTDVDNGDYTCEAYNSVGF----AHTSSRVKIGT------PPRID-RMPNALYIPEGDNTKVKIFYAGDQPM--EVSLT 218 (2245)
Q Consensus 152 ~~~~~d~G~Y~C~a~n~~g~----~~~~~~l~V~~------~P~~~-~~~~~~~v~~G~~~~l~C~~~g~p~~--~i~W~ 218 (2245)
+++.+|+|.|.|.|.|..+. ....+.|.|.. +|.+. ..|....+.+|+.++|.|.+.|.|++ .|+|+
T Consensus 83 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~ 162 (246)
T 4dzb_B 83 SAHPEDSSFYICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWW 162 (246)
T ss_dssp SCCGGGCEEEEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEE
T ss_pred CCCHHHCEEEEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeecCCchhccCCCcEEEEEEEccCcCCceEEEEE
Confidence 99999999999999986542 22345677763 56554 44556667789999999999986654 89999
Q ss_pred eCceeeecCCceEEEE-------eCC----eEEEEEcccCccC-ceeEEEEEEcCCcce
Q psy7042 219 KNGRVVQSDDRFKFTV-------LDD----YIIIFIKEIRKED-AGDYTVNLSNSSGSV 265 (2245)
Q Consensus 219 ~~g~~l~~~~~~~~~~-------~~~----~~~L~i~~~~~~d-~G~Y~C~a~n~~g~~ 265 (2245)
|||..|.......... .++ ...|.|.....+| +|.|+|.|.|.....
T Consensus 163 k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~~~~ 221 (246)
T 4dzb_B 163 VNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSE 221 (246)
T ss_dssp ETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCT
T ss_pred ECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEecCCCC
Confidence 9999986532211000 011 1348888888888 999999999986543
No 294
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.66 E-value=2.3e-16 Score=152.39 Aligned_cols=97 Identities=27% Similarity=0.491 Sum_probs=91.0
Q ss_pred CCCCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECCeeccCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEEc
Q psy7042 88 GEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYN 167 (2245)
Q Consensus 88 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 167 (2245)
..||.|+..|+++.+.+|+.++|.|.+.|.|.|.|.|+|||..|..+.++.+..+++..+|.|.+++.+|+|.|+|.|.|
T Consensus 11 ~~pP~f~~~p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 90 (107)
T 3knb_B 11 GSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARN 90 (107)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCCEEEeCCCcEEEeCCCcEEEEEEEEEecCCEEEEEECcccccceeeEEEeecCceEEEEEecCChhhCEEEEEEEEE
Confidence 35899999999999999999999999999999999999999999999999998888888999999999999999999999
Q ss_pred CcccceeEEEEEecCCC
Q psy7042 168 SVGFAHTSSRVKIGTPP 184 (2245)
Q Consensus 168 ~~g~~~~~~~l~V~~~P 184 (2245)
..|.+++++.|.|..+|
T Consensus 91 ~~G~~~~~~~l~V~~pP 107 (107)
T 3knb_B 91 AAGEAYAAAAVTVLEPP 107 (107)
T ss_dssp TTEEEEEEEEEEEEC--
T ss_pred CCCEEEEEEEEEEEcCC
Confidence 99999999999999886
No 295
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.66 E-value=3.6e-17 Score=188.73 Aligned_cols=174 Identities=14% Similarity=0.202 Sum_probs=108.1
Q ss_pred CCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECC--eec------------cCCCeEEEEEcCcEEEEEEeeecc
Q psy7042 90 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNG--REI------------SSGARYRVETAGGVFRLHFNEVTD 155 (2245)
Q Consensus 90 ~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g--~~l------------~~~~~~~~~~~~~~~~L~i~~~~~ 155 (2245)
.+.++..|..+.+.+|++++|.|.+.+.|.+.|.|+|++ ..+ ....|+.+...++..+|.|.+++.
T Consensus 23 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 102 (233)
T 3bqu_C 23 ETTVTQSPASLSMSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENMLS 102 (233)
T ss_dssp CCCEEEECSBC-------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----C
T ss_pred ceeEEEcCCeEEEecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCCH
Confidence 456677788889999999999999999888899999853 221 112355554455566899999999
Q ss_pred CCCeEEEEEEEcCccccee-EEEEEecC---CCeeecCCCceEEcCCCeEEEEEEEecC-CCc-eEEEeeCceeeecCCc
Q psy7042 156 VDNGDYTCEAYNSVGFAHT-SSRVKIGT---PPRIDRMPNALYIPEGDNTKVKIFYAGD-QPM-EVSLTKNGRVVQSDDR 229 (2245)
Q Consensus 156 ~d~G~Y~C~a~n~~g~~~~-~~~l~V~~---~P~~~~~~~~~~v~~G~~~~l~C~~~g~-p~~-~i~W~~~g~~l~~~~~ 229 (2245)
+|+|.|+|.|.|..+.... ...|.|.. +|.+...+....+.+|+.++|.|.+.|. |++ .|+|+|||..+..+..
T Consensus 103 ~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~ 182 (233)
T 3bqu_C 103 EDVADYYCLQSDNLPYTFGGGTNLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVL 182 (233)
T ss_dssp CCCSEEEEEECSSSSCCBCCCCBC---CCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEEC-----CCEE
T ss_pred HHCEEEEEEEecCCceeecCCEEEEEeCCCCCCEEEEeCCCHHhhcCCceEEEEEEccccCCceEEEEEECCeeCCCCce
Confidence 9999999999987764332 34566654 6777665544444579999999999885 443 7999999998765411
Q ss_pred eE--EEEe-C----CeEEEEEcccCccCceeEEEEEEcCCc
Q psy7042 230 FK--FTVL-D----DYIIIFIKEIRKEDAGDYTVNLSNSSG 263 (2245)
Q Consensus 230 ~~--~~~~-~----~~~~L~i~~~~~~d~G~Y~C~a~n~~g 263 (2245)
.. .... + ....|.|..+..+|+|.|+|.|.|...
T Consensus 183 ~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~ 223 (233)
T 3bqu_C 183 NSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTS 223 (233)
T ss_dssp EEECCCCTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC--
T ss_pred EecCCccCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCC
Confidence 10 0000 1 124689999999999999999999754
No 296
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.66 E-value=3.6e-16 Score=183.05 Aligned_cols=177 Identities=15% Similarity=0.162 Sum_probs=129.6
Q ss_pred eccCCceEEcCCCeEEEEEEecC---cCCCeEEEeeCCEecc------------------------------CCceEEEE
Q psy7042 1701 IVPLKDLVVPLGKLLTLQCEATG---TPVPKCRWLRNGREIS------------------------------SGARYRVE 1747 (2245)
Q Consensus 1701 ~~~~~~~~~~~G~~v~L~C~~~~---~p~~~v~W~~~~~~l~------------------------------~~~~~~~~ 1747 (2245)
..++..+.+.+|++++|.|.+.+ .|.+.+.|+|++.... ...|..+.
T Consensus 6 ~~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 85 (250)
T 2fbo_J 6 RTTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVA 85 (250)
T ss_dssp ECSCSEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECS
T ss_pred EcCCCceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEec
Confidence 34456788999999999999987 7888999999875421 11222222
Q ss_pred ecCcEEEEEEeeeccCCCeEEEEEEecCcee-----eEEEEEEEecCC---Cccc-cCCCceEEcCCCeEEEEEEEeccC
Q psy7042 1748 TAGGVFRLHFNEVTDVDNGDYTCEAYNSVGF-----AHTSSRVKIGTP---PRID-RMPNALYIPEGDNTKVKIFYAGDQ 1818 (2245)
Q Consensus 1748 ~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~-----~~~~~~l~V~~~---p~~~-~~~~~~~~~~g~~~~l~C~~~~~p 1818 (2245)
. .+..+|.|.+++.+|+|.|+|.+.|..+. ....+.|.|..+ |.+. ..+....+.+|+.+.|.|.+.+.|
T Consensus 86 ~-~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~~g~p 164 (250)
T 2fbo_J 86 N-LAAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCTDCA 164 (250)
T ss_dssp C-TTSCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCEESCT
T ss_pred c-CCcceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEecCCC
Confidence 1 12346999999999999999999997664 356788888774 3333 344567788899999999999999
Q ss_pred CcEEEEEECCEEeecCCceE----------------------EEEcCCeEEEEEcccCcccceEEEEEEEcCC---eeeE
Q psy7042 1819 PMEVSLTKNGRVVQSDDRFK----------------------FTVLDDYIIIFIKEIRKEDAGDYTVNLSNSS---GSVS 1873 (2245)
Q Consensus 1819 ~~~v~W~~~g~~l~~~~~~~----------------------~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~---g~~~ 1873 (2245)
.|.+.|+|++..+....... ... .....|.|.++..+|+|.|+|.|.|.. |...
T Consensus 165 ~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~g~~~ 243 (250)
T 2fbo_J 165 NANVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASF-SGARNLVIRAAKITDAGRVWCELATGQGELDADR 243 (250)
T ss_dssp TCEEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEE-ETTTEEEECSCCGGGCEEEEEEEESSSSGGGEEE
T ss_pred CCeeEEEeCCCcccccccCcceeEeccCCCCccccCceEeccccc-CCccEEEEecCCcccCEEEEEEecCCccccCccc
Confidence 99999999988775422111 010 022479999999999999999999954 4555
Q ss_pred EEEEEE
Q psy7042 1874 GTFTIN 1879 (2245)
Q Consensus 1874 ~~~~l~ 1879 (2245)
..+.|.
T Consensus 244 ~~~~l~ 249 (250)
T 2fbo_J 244 SSTILK 249 (250)
T ss_dssp EEEEEE
T ss_pred eeEEEe
Confidence 555554
No 297
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.65 E-value=1.5e-15 Score=173.73 Aligned_cols=182 Identities=18% Similarity=0.169 Sum_probs=131.2
Q ss_pred ccCCceEEcCCCeEEEEEEecCcCC-----CeEEEeeCCEecc---------------CCceEEEEe---cCcEEEEEEe
Q psy7042 1702 VPLKDLVVPLGKLLTLQCEATGTPV-----PKCRWLRNGREIS---------------SGARYRVET---AGGVFRLHFN 1758 (2245)
Q Consensus 1702 ~~~~~~~~~~G~~v~L~C~~~~~p~-----~~v~W~~~~~~l~---------------~~~~~~~~~---~~~~~~L~i~ 1758 (2245)
.++..+.+.+|++++|.|.+.+.|. +.+.|+|++..+. ...|..+.. ..+..+|.|.
T Consensus 6 ~p~~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~ 85 (222)
T 3sbw_C 6 VPKDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQIT 85 (222)
T ss_dssp CSCSEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEES
T ss_pred cCCccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEc
Confidence 3445678999999999999987763 4799999763321 013444432 2356789999
Q ss_pred eeccCCCeEEEEEEecCceeeEEEEEEEecCCCccccCCCceEEcCCCeEEEEEEEeccCCcEEEEEEC-CEEeecCCce
Q psy7042 1759 EVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKN-GRVVQSDDRF 1837 (2245)
Q Consensus 1759 ~v~~~d~G~Y~C~~~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~v~W~~~-g~~l~~~~~~ 1837 (2245)
+++.+|+|.|+|.+.| .|.....+.|.|..+|..........+.+|+.+.|.|.+.|.|.+.+.|+++ |..+......
T Consensus 86 ~v~~~D~G~Y~C~~~~-~~~~~~~~~l~V~~~~~~~~~~~~~~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~~~~~~~~ 164 (222)
T 3sbw_C 86 DVKLQDAGVYRCMISY-GGADYKRITVKVNAPYNKINQRILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTTT 164 (222)
T ss_dssp SCCGGGCEEEEEEEES-SSEEEEEEEEEEEBCCCCCEEEEEEEETTTTEEEEEEEEEEBSCCEEEEEETTCCEECCEEEE
T ss_pred CcccccCeEEEEEEEe-CCCceeEEEEEEECCCCCCCceeeeeecCCCcEEEEEEecCCCCCeEEEEECCCceecCccce
Confidence 9999999999999999 6667778889998776543322223677899999999999999999999998 6665433221
Q ss_pred EEEEc--CCeEEEEEcccCcccceEEEEEEEcCCeeeEEEEEEEEeCCC
Q psy7042 1838 KFTVL--DDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLP 1884 (2245)
Q Consensus 1838 ~~~~~--~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p 1884 (2245)
..... +....+.+..+..+|.|.|+|.|.|..|.....+.|.|...|
T Consensus 165 ~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~p 213 (222)
T 3sbw_C 165 TNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPEENHTAELVIPELP 213 (222)
T ss_dssp EECC----CEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCCC-
T ss_pred EEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCccceeeEEEEEecCCc
Confidence 11111 111223333556789999999999999999999999987554
No 298
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.65 E-value=1e-15 Score=180.21 Aligned_cols=173 Identities=17% Similarity=0.245 Sum_probs=126.7
Q ss_pred CCCceecCCcceEEeCCCeEEEEEEEeeec-----CCceEEEECC--eec---c---------CCCeEEEEEcCcEEEEE
Q psy7042 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTP-----VPKCRWLRNG--REI---S---------SGARYRVETAGGVFRLH 149 (2245)
Q Consensus 89 ~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p-----~~~i~W~~~g--~~l---~---------~~~~~~~~~~~~~~~L~ 149 (2245)
..+.++..|..+.+.+|++++|.|.+.+.| .+.|.|+|++ ..+ . ...|+.+...++..+|+
T Consensus 14 ~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~ 93 (268)
T 1x9q_A 14 SDVVMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTLK 93 (268)
T ss_dssp CCCCEEEECSEECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEE
T ss_pred ccceEEeeCCeEEecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEEE
Confidence 456777788888999999999999998877 4789999853 211 1 24578877667777899
Q ss_pred EeeeccCCCeEEEEEEEcCcccc-eeEEEEEecCCCe-----------------------eecCCCceEEcCCCeEEEEE
Q psy7042 150 FNEVTDVDNGDYTCEAYNSVGFA-HTSSRVKIGTPPR-----------------------IDRMPNALYIPEGDNTKVKI 205 (2245)
Q Consensus 150 i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~P~-----------------------~~~~~~~~~v~~G~~~~l~C 205 (2245)
|.+++.+|+|.|.|.|.|..+.. ...+.|.|..++. ....+....+.+|++++|.|
T Consensus 94 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~p~~pp~~~~~~~~~~~~~~v~~~~~~~~~v~~G~~v~L~C 173 (268)
T 1x9q_A 94 INRVEAEDLGVYFCSQSTHVPWTFGGGTKLEIKSSADDAKKDAAKKDDAKKDDAKKDGGVKLDETGGGLVQPGGAMKLSC 173 (268)
T ss_dssp ESSCCGGGCEEEEEEECSSSSCEECCCEEEC------------------------CGGGCEEEEECCEEECTTCCEEEEE
T ss_pred ECCCChhHCEEEEEEEecCCCceEcCCEEEEEccCccCCCccccccccccccccccccceEEECCCceEecCCCcEEEEE
Confidence 99999999999999999876532 2345677765322 12234567899999999999
Q ss_pred EEecCCC--ceEEEeeC--ceeee-------------------cCCceEEEEe--CCeEEEEEcccCccCceeEEEEEEc
Q psy7042 206 FYAGDQP--MEVSLTKN--GRVVQ-------------------SDDRFKFTVL--DDYIIIFIKEIRKEDAGDYTVNLSN 260 (2245)
Q Consensus 206 ~~~g~p~--~~i~W~~~--g~~l~-------------------~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~a~n 260 (2245)
.+.+.|+ +.+.|||+ +..+. ...++.+... .....|.|.+++.+|+|.|.|.|.|
T Consensus 174 ~~~~~~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~ 253 (268)
T 1x9q_A 174 VTSGFTFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQMNNLRVEDTGIYYCTGAS 253 (268)
T ss_dssp EEESSCGGGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred EecCccccccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEcc
Confidence 9998764 78999985 32211 1245555443 2357899999999999999999987
Q ss_pred C
Q psy7042 261 S 261 (2245)
Q Consensus 261 ~ 261 (2245)
.
T Consensus 254 ~ 254 (268)
T 1x9q_A 254 Y 254 (268)
T ss_dssp T
T ss_pred C
Confidence 4
No 299
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.65 E-value=8.1e-16 Score=181.67 Aligned_cols=185 Identities=15% Similarity=0.235 Sum_probs=133.8
Q ss_pred ceecCCcceEEeCCCeEEEEEEEeee--cCCceEEEECC--eecc-----------------CCCeEEEE--EcCcEEEE
Q psy7042 92 DFIVPLKDLVVPLGKLLTLQCEATGT--PVPKCRWLRNG--REIS-----------------SGARYRVE--TAGGVFRL 148 (2245)
Q Consensus 92 ~~~~~~~~~~v~~G~~v~L~C~~~g~--p~~~i~W~~~g--~~l~-----------------~~~~~~~~--~~~~~~~L 148 (2245)
.++. |..+.+.+|++|+|.|.+.+. +.+.+.|+|.. ..+. ...|+.+. ..++..+|
T Consensus 3 ~v~q-p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL 81 (280)
T 3fku_X 3 QLVQ-SGAEVKKPGSSVKVSCTSSEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYM 81 (280)
T ss_dssp CEEC-CCCCEECTTCCEEEEEEECCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEE
T ss_pred eEEc-CCCEEECCCCcEEEEEEeeccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEE
Confidence 4455 677899999999999999875 56789999832 1111 12366666 34556789
Q ss_pred EEeeeccCCCeEEEEEEEcC---------cccceeEEEEEecC---------------CCeeecCCCceEEcCCCeEEEE
Q psy7042 149 HFNEVTDVDNGDYTCEAYNS---------VGFAHTSSRVKIGT---------------PPRIDRMPNALYIPEGDNTKVK 204 (2245)
Q Consensus 149 ~i~~~~~~d~G~Y~C~a~n~---------~g~~~~~~~l~V~~---------------~P~~~~~~~~~~v~~G~~~~l~ 204 (2245)
.|.+++.+|+|.|.|.|.|. .......+.|.|.. +|.+...|. ..+.+|++++|.
T Consensus 82 ~I~~v~~~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~~p~-~~v~~G~~v~L~ 160 (280)
T 3fku_X 82 DLRSLRSEDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQPPS-VSKGLRQTATLT 160 (280)
T ss_dssp EECSCCSTTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBCCSE-EEECTTCCEEEE
T ss_pred EECCCChhhCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEeCCc-EEEecCCCEEEE
Confidence 99999999999999999986 11222355688876 566666666 899999999999
Q ss_pred EEEec-CC-CceEEEee--Cceeee------------cCCceEEEEeCCeEEEEEcccCccCceeEEEEEEcCCcc---e
Q psy7042 205 IFYAG-DQ-PMEVSLTK--NGRVVQ------------SDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGS---V 265 (2245)
Q Consensus 205 C~~~g-~p-~~~i~W~~--~g~~l~------------~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~---~ 265 (2245)
|.+.+ .+ .+.+.||| .+..+. ...++.+...+....|.|.+++.+|+|.|.|.+.|..+. .
T Consensus 161 C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~ 240 (280)
T 3fku_X 161 CTGNSNNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQPEDEADYYCSTWDSSLSAVVF 240 (280)
T ss_dssp EECCCCCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEEEETTTTEEEE
T ss_pred EEecCCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCCHHHCEEEEEEEecCCCCceEE
Confidence 99987 44 47999998 333222 134566666667778999999999999999999987632 3
Q ss_pred EEEEEEEEecCCC
Q psy7042 266 SGTFTINITGLPG 278 (2245)
Q Consensus 266 ~~~~~l~V~~~p~ 278 (2245)
...+.|.|...|.
T Consensus 241 g~~t~l~V~~~~~ 253 (280)
T 3fku_X 241 GGGTKLTVLGQPK 253 (280)
T ss_dssp BCCCEEEEC----
T ss_pred CCCEEEEECCCCC
Confidence 3456788866543
No 300
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.65 E-value=5.4e-16 Score=175.29 Aligned_cols=169 Identities=17% Similarity=0.227 Sum_probs=125.2
Q ss_pred CCceEEcCCCeEEEEEEecCcCCCeEEEeeC--CEec------------cCCceEEEEecCcEEEEEEeeeccCCCeEEE
Q psy7042 1704 LKDLVVPLGKLLTLQCEATGTPVPKCRWLRN--GREI------------SSGARYRVETAGGVFRLHFNEVTDVDNGDYT 1769 (2245)
Q Consensus 1704 ~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~--~~~l------------~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 1769 (2245)
+..+.+.+|++++|.|.+.+.|.+.+.|+|+ |..+ ....|+.+...++..+|.|.+++.+|+|.|+
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 86 (210)
T 1lk3_L 7 PPALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDTAIYF 86 (210)
T ss_dssp CSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred CCcEEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHCeEEE
Confidence 5678899999999999999988889999984 2222 1135777666677788999999999999999
Q ss_pred EEEecCceeeEE-EEEEEecC---CCccccCCCceEEcCCCeEEEEEEEecc-CCc-EEEEEECCEEeecCCceE--EEE
Q psy7042 1770 CEAYNSVGFAHT-SSRVKIGT---PPRIDRMPNALYIPEGDNTKVKIFYAGD-QPM-EVSLTKNGRVVQSDDRFK--FTV 1841 (2245)
Q Consensus 1770 C~~~n~~g~~~~-~~~l~V~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~v~W~~~g~~l~~~~~~~--~~~ 1841 (2245)
|.+.|..+.... ...|.|.. +|.+...+....+.+|+.++|.|.+.|. |++ .|.|+|+|+.+....... ...
T Consensus 87 C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~ 166 (210)
T 1lk3_L 87 CQQSWNGPLTFGAGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQD 166 (210)
T ss_dssp EEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEECCTTEEEEECCCC
T ss_pred EEEEcCCCceeCCCEEEEEcCCCcCCeEEEECCchhhccCCcEEEEEEEEeEeCCceEEEEEeCCccCCCCceEccCCcc
Confidence 999998764332 34677765 5666554433334579999999999984 543 899999999876441111 111
Q ss_pred cCC-----eEEEEEcccCcccceEEEEEEEcCCeee
Q psy7042 1842 LDD-----YIIIFIKEIRKEDAGDYTVNLSNSSGSV 1872 (2245)
Q Consensus 1842 ~~~-----~~~l~i~~~~~~d~G~Y~C~a~n~~g~~ 1872 (2245)
..+ ...|.|..+..+|+|.|+|.|.|.....
T Consensus 167 ~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 202 (210)
T 1lk3_L 167 SKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSSS 202 (210)
T ss_dssp TTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSS
T ss_pred CCCCCEEEEEEEEEChHHhccCCcEEEEEEecCCCC
Confidence 111 1379999999999999999999987643
No 301
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.65 E-value=2.7e-16 Score=181.57 Aligned_cols=155 Identities=13% Similarity=0.195 Sum_probs=106.7
Q ss_pred cCCcceEEeCCCeEEEEEEEeeecCCc-eEEEE--CCeec-cCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEEcCcc
Q psy7042 95 VPLKDLVVPLGKLLTLQCEATGTPVPK-CRWLR--NGREI-SSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVG 170 (2245)
Q Consensus 95 ~~~~~~~v~~G~~v~L~C~~~g~p~~~-i~W~~--~g~~l-~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g 170 (2245)
+.|++..|.+|++++|+|.+. .+.|. +.|.- .+..+ ..+ .....|.|.+++.+ |.|+|.+.....
T Consensus 4 v~P~~~~V~~G~sv~l~Cs~~-c~~p~~~~~~t~l~~~~~~~~g--------~~~~~~~l~~v~~~--~~y~C~~~~~~~ 72 (291)
T 1mq8_A 4 VSPSKVILPRGGSVLVTCSTS-CDQPKLLGIETPLPKKELLLPG--------NNRKVYELSNVQED--SQPMCYSNCPDG 72 (291)
T ss_dssp EECSEEEECTTCEEEEEEEEC-CSSCSEEEEECSSCCCCCCCSC--------SSEEEEEEESCCSC--CCCEEEEECSSC
T ss_pred EeCCccEEcCCCeEEEEEeCC-CCCCccceEEecCCCcccccCC--------CceEEEEEEecccC--CeEEEEEEcCCc
Confidence 345678899999999999996 45555 89853 12222 111 12224778888753 569999975544
Q ss_pred cceeEEEEEecCCCee-ecCCCceEEcCCCeEEEEEEEecC-CCc--eEEEeeCceeeecCCceEEEEeCCeEEEEEccc
Q psy7042 171 FAHTSSRVKIGTPPRI-DRMPNALYIPEGDNTKVKIFYAGD-QPM--EVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEI 246 (2245)
Q Consensus 171 ~~~~~~~l~V~~~P~~-~~~~~~~~v~~G~~~~l~C~~~g~-p~~--~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~ 246 (2245)
..+..+.|.|..+|.- ...+....+.+|+.++|.|.+.|. |.. .|+|||+++.|...... ......+|.+...
T Consensus 73 ~~~~~v~l~V~~~P~~v~I~~~~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~~~~---~~~~~~~l~~~~~ 149 (291)
T 1mq8_A 73 QSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAV---GEPAEVTTTVLVR 149 (291)
T ss_dssp EEEEECEEEECBCCSCCCBCCCCSBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEEEECC---BTTEEEEEECCCS
T ss_pred cEEEEEEEEEecCCCCCEEecCCccccCCCCEEEEEEecCccCCCCcEEEEEECCEEeecccCC---CCCceEEEEeeee
Confidence 4556778999998864 344444568899999999999874 543 58999999888643210 1122346777777
Q ss_pred CccCceeEEEEEEcCCc
Q psy7042 247 RKEDAGDYTVNLSNSSG 263 (2245)
Q Consensus 247 ~~~d~G~Y~C~a~n~~g 263 (2245)
+.+|.+.|+|+|.|..+
T Consensus 150 ~~D~g~~~~C~A~~~l~ 166 (291)
T 1mq8_A 150 RDHHGANFSCRTELDLR 166 (291)
T ss_dssp SSCSSCEEEEEEEEECG
T ss_pred eccCCceEEEEEEecCC
Confidence 77777799999998654
No 302
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.65 E-value=1.6e-16 Score=179.83 Aligned_cols=175 Identities=12% Similarity=0.166 Sum_probs=118.7
Q ss_pred CCCceecCCcceE--EeCCCeEEEEEEEeee---cC-CceEEEECCeeccCCCeEEEEE-cC----cEEEEEEeeeccCC
Q psy7042 89 EKPDFIVPLKDLV--VPLGKLLTLQCEATGT---PV-PKCRWLRNGREISSGARYRVET-AG----GVFRLHFNEVTDVD 157 (2245)
Q Consensus 89 ~~P~~~~~~~~~~--v~~G~~v~L~C~~~g~---p~-~~i~W~~~g~~l~~~~~~~~~~-~~----~~~~L~i~~~~~~d 157 (2245)
.+|.+...|.... +.+|++++|.|.+.|. |. +.|.|+|++..+.......... .+ ....|.|.+++.+|
T Consensus 8 ~~p~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D 87 (218)
T 2rgs_A 8 GGPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWMS 87 (218)
T ss_dssp -CCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHHHHHT
T ss_pred CCCEEEEECcCHHHhhccCCCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHHHcCC
Confidence 3566555444433 7899999999999987 33 7899999998876432211111 11 12369999999999
Q ss_pred CeEEEEEEEcCcccc--eeEEEE--EecCCCeeecCCCceEEcCCCeEEEEEEEec-CCCc-eEEEeeCceeeecCCceE
Q psy7042 158 NGDYTCEAYNSVGFA--HTSSRV--KIGTPPRIDRMPNALYIPEGDNTKVKIFYAG-DQPM-EVSLTKNGRVVQSDDRFK 231 (2245)
Q Consensus 158 ~G~Y~C~a~n~~g~~--~~~~~l--~V~~~P~~~~~~~~~~v~~G~~~~l~C~~~g-~p~~-~i~W~~~g~~l~~~~~~~ 231 (2245)
+|.|+|.|.|..+.. ...+.+ .+..+|.+...+......+|+.++|.|.+.| +|.+ .|+|+|||..+.......
T Consensus 88 ~g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~ 167 (218)
T 2rgs_A 88 GKEFKCKVNNKDLPSPIERTISKIKGLVRAPQVYILPPPAEQLSRKDVSLTCLVVGFNPGDISVEWTSNGHTEENYKDTA 167 (218)
T ss_dssp TCCEEEEEEETTCSSCEEEEECCCCCCCBCCEEEEECCCGGGTTSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECC
T ss_pred CCeEEEEEECCcCCCcceEEEeecCCCCCCCEEEEECCChHHhcCCceEEEEEEEeeeCCCcEEEEEECCEeccCceecc
Confidence 999999999987754 222222 5567888765554433346999999999998 6765 999999999874322111
Q ss_pred EEEe-CC----eEEEEEcccCccCceeEEEEEEcCCc
Q psy7042 232 FTVL-DD----YIIIFIKEIRKEDAGDYTVNLSNSSG 263 (2245)
Q Consensus 232 ~~~~-~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g 263 (2245)
.... ++ ...|.|.....+|.|.|+|.|.|...
T Consensus 168 ~~~~~~gt~~~~s~l~v~~~~~~d~g~YtC~a~n~~l 204 (218)
T 2rgs_A 168 PVLDSDGSYFIYSKLNMKTSKWEKTDSFSCNVRHEGL 204 (218)
T ss_dssp CEECTTSCEEEEEEEEEEHHHHHHCSCEEEEEECTTS
T ss_pred cEECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCC
Confidence 1111 11 12355665555679999999999864
No 303
>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D*
Probab=99.65 E-value=1.6e-15 Score=185.94 Aligned_cols=287 Identities=14% Similarity=0.082 Sum_probs=164.2
Q ss_pred CCCCCcccEEeeee-CceEEEEecCCCC-C-CCCccceEEEeeeecCCCceEEecceeeeceEEEecCCCCceeeEEEEE
Q psy7042 901 RPHPPENLHADEFA-GDSLTLYWTPPRD-N-GGSEITNYVVEKKDYNSTVWTKVSSYVTTPFVRVRNLAIGSTYEFRVMA 977 (2245)
Q Consensus 901 ~P~~p~~l~~~~~~-~~~~~l~W~~p~~-~-~g~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a 977 (2245)
.|.||.++.+.+.. .+++.|+|+++.+ + .+..+..|+|+|+..+.+.|+.+.... .....++..+..|+|+|+|
T Consensus 31 ~~~pP~nl~v~~~~~~~~v~LsW~p~~~~~~~~~~~~~Y~v~~~~~~~~~w~~~~~~~---~~~~~~~~l~~~y~~rV~a 107 (380)
T 3lb6_C 31 KVNPPQDFEIVDPGYLGYLYLQWQPPLSLDHFKECTVEYELKYRNIGSETWKTIITKN---LHYKDGFDLNKGIEAXIHT 107 (380)
T ss_dssp CCCCCEEEEEECCSSSSEEEEEEECCCC------CCCEEEEEEEETTCSSCEEEEESS---SEEEEECCTTSCEEEEEEE
T ss_pred cCCcCCceEEEecCcCceEEEEECCCCCccccccceEEEEEEECCCCCCcceEEEecc---EEEEEeecCCCceEEEEEe
Confidence 58999999999876 6899999999876 2 223689999999988778898876642 2234466669999999999
Q ss_pred Eec----cccCCCccccCcccccCCCCCCC-CCCCCeeEeecCCeEEEEecCCCCCCCCccceEEEEEEecCCccceecc
Q psy7042 978 ENQ----YGLSKPALTIDPIKAKHPFDVPG-APGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKAS 1052 (2245)
Q Consensus 978 ~n~----~g~~~~s~~~~~~~~~t~~~~p~-~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~ 1052 (2245)
.|. .|.|.++..+......++++.|. +|.+++....+.+++.++|+++... +...+|.|.|+..+...+..|.
T Consensus 108 ~~~~~~~~g~g~~S~~s~~~~~~~~eg~P~~~P~nl~C~~~~~~~l~csW~p~~~~--~~~~~Y~l~y~~~~~~~~~~C~ 185 (380)
T 3lb6_C 108 LLPWQCTNGSEVQSSWAETTYWISPQGIPETXVQDMDCVYYNWQYLLCSWKPGIGV--LLDTNYNLFYWYEGLDHALQCV 185 (380)
T ss_dssp ECCHHHHSSSCCBCCCEEEEECCCCCSCTTSSCEEEEEEEETTTEEEEEEECC--------CCEEEEEECTTCSSCEECS
T ss_pred ecCCcccCCccCccccchhhcccCCCCCCCCCCcEeEEEECCCcEEEEEEcCCCCC--CCCccEEEEEEECCCCccccCC
Confidence 975 67777776555555555656654 8999999988999999999987643 2367899999876654455552
Q ss_pred ccccCCcceeEEEEeecccccCCccCchhhhhhhhhcccccccccccCCcEEEEEEEEEecCCCCCCCCCCcceeecCCC
Q psy7042 1053 MAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSDIIMCCAPP 1132 (2245)
Q Consensus 1053 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~v~A~n~~G~~~~s~~~~~~~~~~~p 1132 (2245)
...... ...... .+...++...+.|.|+|+|.|..|.+..+. . .+
T Consensus 186 ~~~~~~-g~~~~C--------------------------~~~~~~~~~~~~Y~i~V~a~n~~G~~~s~~-~---~~---- 230 (380)
T 3lb6_C 186 DYIKAD-GQNIGC--------------------------RFPYLEASDYKDFYICVNGSSENKPIRSSY-F---TF---- 230 (380)
T ss_dssp EEEEC---CEEEE--------------------------ECCCCTTCSSSCEEEEEEEC-----CCCEE-E---EE----
T ss_pred CccccC-CceEEE--------------------------EeCCCcccceeEEEEEEEEEcCCeeecccc-E---EE----
Confidence 111000 000000 002335678889999999998877543110 0 00
Q ss_pred CCCccccCCCceeEEEEcCCeEEEEEEeeecCCCcceEEeCCeecCCCCcEEEEEccceEEEEecCccccccceeEEEEE
Q psy7042 1133 CAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQL 1212 (2245)
Q Consensus 1133 ~~p~~~~~~~~~~~~v~~~~~~~l~~~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~a 1212 (2245)
.....
T Consensus 231 --------------------------------------------------------------~~~~~------------- 235 (380)
T 3lb6_C 231 --------------------------------------------------------------QLQNI------------- 235 (380)
T ss_dssp --------------------------------------------------------------CGGGS-------------
T ss_pred --------------------------------------------------------------cHHHc-------------
Confidence 00000
Q ss_pred EcCCcceeEEEEEEEECCCCCCCCCceeeeccCCcEEEEecCCCCCCCcceeeeEEEEeeccccceEEcccceecceEEe
Q psy7042 1213 VNTVGSDSASCKVYVVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPAYDV 1292 (2245)
Q Consensus 1213 ~n~~g~~~~s~~~~v~~~p~~p~~~~~~~~~~~~s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~l 1292 (2245)
..|.|| .++.+...+.+++.|+|++|....+..+.+|.|+|+.. +..|..... ..++.|
T Consensus 236 ----------------v~p~pP-~~l~v~~~~~~~l~l~W~~P~~~~~~~~l~Yev~y~~~-~~~w~~~~~---~~~~~l 294 (380)
T 3lb6_C 236 ----------------VKPLPP-VYLTFTRESSCEIKLKWSIPLGPIPARCFDYEIEIRED-DTTLVTATV---ENETYT 294 (380)
T ss_dssp ----------------CCCCCC-EEEEEC-------CEEEECCSSSCCSTTEEEEECC---------CCEE---SSSCC-
T ss_pred ----------------ccCCCC-ceEEEEEcCCCeEEEEECCCCCCCCcceEEEEEEEEeC-CCCceEecc---cceEEE
Confidence 123333 34666655667899999998765555578999998874 455654322 235778
Q ss_pred cC-CCCCceEEEEEEEeccc---cCCCCcccCCcc
Q psy7042 1293 FG-LETNRQYRFRVRAENQY---GVSEPLELDNSI 1323 (2245)
Q Consensus 1293 ~~-L~~~t~Y~~~v~A~n~~---G~~~~s~~~~~~ 1323 (2245)
.+ |++++.|.|+|+|.... +.|..|+.+..+
T Consensus 295 ~~~L~p~t~Y~~qVRa~~~~~~~~~g~WSeWS~~~ 329 (380)
T 3lb6_C 295 LKTTNETRQLCFVVRSKVNIYCSDDGIWSEWSDKQ 329 (380)
T ss_dssp -----------CCEEEEECTTTCSSCCCCCCCCC-
T ss_pred eCccCCCcEEEEEEEEEEcccCCCCCCCCCCCCCE
Confidence 89 99999999999999653 334445444443
No 304
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.65 E-value=2.1e-16 Score=177.36 Aligned_cols=171 Identities=13% Similarity=0.175 Sum_probs=117.3
Q ss_pred eecCCcceE-EeCCCeEEEEEEEeeec----CCceEEEECCeeccCCCe-EEEEEcCc----EEEEEEeeeccCCCeEEE
Q psy7042 93 FIVPLKDLV-VPLGKLLTLQCEATGTP----VPKCRWLRNGREISSGAR-YRVETAGG----VFRLHFNEVTDVDNGDYT 162 (2245)
Q Consensus 93 ~~~~~~~~~-v~~G~~v~L~C~~~g~p----~~~i~W~~~g~~l~~~~~-~~~~~~~~----~~~L~i~~~~~~d~G~Y~ 162 (2245)
++.+|.... +.+|++++|.|.+.|.| .+.|.|+|++..+..... +.....++ ...|.|.+++.+|+|.|+
T Consensus 5 ~~~~P~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~ 84 (207)
T 2vol_A 5 FIFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGKEFK 84 (207)
T ss_dssp EEECCCHHHHHSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTCCEE
T ss_pred EEeCcChhhhhccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCCEEE
Confidence 344555444 78999999999999884 248999999987653210 00011111 236999999999999999
Q ss_pred EEEEcCccccee--EEEE--EecCCCeeecCCCceEEcCCCeEEEEEEEec-CCC-ceEEEeeCceeeecCCceEEEEe-
Q psy7042 163 CEAYNSVGFAHT--SSRV--KIGTPPRIDRMPNALYIPEGDNTKVKIFYAG-DQP-MEVSLTKNGRVVQSDDRFKFTVL- 235 (2245)
Q Consensus 163 C~a~n~~g~~~~--~~~l--~V~~~P~~~~~~~~~~v~~G~~~~l~C~~~g-~p~-~~i~W~~~g~~l~~~~~~~~~~~- 235 (2245)
|.|.|..+.... .+.+ .+..+|.+...+......+|+.++|.|.+.| .|+ +.|+|+|||..+...........
T Consensus 85 C~a~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~ 164 (207)
T 2vol_A 85 CRVNSAAFPAPIEKTISKTKGRPKAPQVYTLPPPKEQMAKDKVSLTCMITDFFPEDITVEWESNGQPAENYKNTQPIMDT 164 (207)
T ss_dssp EEEECTTCSSCEEEEECCCCCCCBCCEEEEECCCTGGGSSSEEEEEEEEEEEBSSCCEEEEEETTEECSCEEECCCEECT
T ss_pred EEEEccCCCCceEEEeccCCCCCcCCeEEEeCCCHHHhcCCceEEEEEEeeEECCCCEEEEEECCEeccCcccCCceECC
Confidence 999998886433 3333 5567888765554433446999999999998 454 48999999998753221111111
Q ss_pred CC----eEEEEEcccCccCceeEEEEEEcCCc
Q psy7042 236 DD----YIIIFIKEIRKEDAGDYTVNLSNSSG 263 (2245)
Q Consensus 236 ~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g 263 (2245)
++ ...|.|.....+|.|.|+|.|.|...
T Consensus 165 ~g~~~~~s~l~i~~~~~~~~g~ytC~a~n~~l 196 (207)
T 2vol_A 165 DGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGL 196 (207)
T ss_dssp TSCEEEEEEEEEEHHHHSSCCEEEEEEECTTS
T ss_pred CCCEEEEEEEEECHHHcCCCCEEEEEEECCCC
Confidence 11 12466666666789999999999864
No 305
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.65 E-value=1.1e-15 Score=174.24 Aligned_cols=172 Identities=15% Similarity=0.204 Sum_probs=123.5
Q ss_pred CcceEEeCCCeEEEEEEEeeec--CCceEEEECC--ee---cc----------------CCCeEEEEEc--CcEEEEEEe
Q psy7042 97 LKDLVVPLGKLLTLQCEATGTP--VPKCRWLRNG--RE---IS----------------SGARYRVETA--GGVFRLHFN 151 (2245)
Q Consensus 97 ~~~~~v~~G~~v~L~C~~~g~p--~~~i~W~~~g--~~---l~----------------~~~~~~~~~~--~~~~~L~i~ 151 (2245)
|..+.+.+|++++|.|.+.+.| .+.|.|+|++ .. +. ..+|+.+..+ ++..+|.|.
T Consensus 7 p~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 86 (220)
T 1pz5_B 7 SGGGLVQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQMN 86 (220)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEEC
T ss_pred cCCEEEcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEEc
Confidence 4567899999999999998766 6789999853 21 10 0357777653 456689999
Q ss_pred eeccCCCeEEEEEEEcCcccc-e--eEEEEEec----CCCeeecCCCceEEcCCCeEEEEEEEecC-CCc-eEEEeeCce
Q psy7042 152 EVTDVDNGDYTCEAYNSVGFA-H--TSSRVKIG----TPPRIDRMPNALYIPEGDNTKVKIFYAGD-QPM-EVSLTKNGR 222 (2245)
Q Consensus 152 ~~~~~d~G~Y~C~a~n~~g~~-~--~~~~l~V~----~~P~~~~~~~~~~v~~G~~~~l~C~~~g~-p~~-~i~W~~~g~ 222 (2245)
+++.+|+|.|.|.|.|..+.. . ..+.|.|. .+|.+...+....+.+|+.++|.|.+.|. |.| .|+|++++.
T Consensus 87 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~ 166 (220)
T 1pz5_B 87 NLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYPLVPGCSDTSGSSVTLGCLVKGYFPEPVTVKWNYGAL 166 (220)
T ss_dssp SCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCSCCSCSSSEEEEEEEEEEBSSCCEEEEGGGTC
T ss_pred cCCHHHCEEEEEEEecCCcccceECCCEEEEEccCCCCCCeEEEcccccccCCCCcEEEEEEEEEEeCCCeEEEEecCCc
Confidence 999999999999999976432 1 34677776 35666554444456889999999999986 888 999999887
Q ss_pred ee--ecCCceEEEE--eCCeEEEEEcccCccCceeEEEEEEcCCcceEEEEE
Q psy7042 223 VV--QSDDRFKFTV--LDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFT 270 (2245)
Q Consensus 223 ~l--~~~~~~~~~~--~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 270 (2245)
.+ ...... ... ....+.|.|.++..+| |.|+|.|.|..|....++.
T Consensus 167 ~~~~~~~~~~-~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~ 216 (220)
T 1pz5_B 167 SSGVRTVSSV-LQSGFYSLSSLVTVPSSTWPS-QTVICNVAHPASKVDLIKE 216 (220)
T ss_dssp CTTEEECCCE-EETTEEEEEEEEEECGGGTTT-SCCEEEEEEGGGTEEEEEE
T ss_pred ccceEEcCCc-ccCCeEEEEEEEEEcchhcCC-ceEEEEEEECCccEeeeec
Confidence 41 001100 000 0113469999988867 9999999999997665543
No 306
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.65 E-value=1.3e-15 Score=172.93 Aligned_cols=169 Identities=13% Similarity=0.195 Sum_probs=127.2
Q ss_pred CceeccCCceEEcCCCeEEEEEEecCcCCCeEEEeeCC--Eec------------cCCceEEEEecCcEEEEEEeeeccC
Q psy7042 1698 PDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNG--REI------------SSGARYRVETAGGVFRLHFNEVTDV 1763 (2245)
Q Consensus 1698 p~~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~~--~~l------------~~~~~~~~~~~~~~~~L~i~~v~~~ 1763 (2245)
|.+...+..+.+.+|++++|.|.+.+.|.+.+.|+|++ ..+ ....|+.+...++..+|.|.+++.+
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 81 (213)
T 3nl4_L 2 VVMTQTPASVSEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLECA 81 (213)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGG
T ss_pred ccEEeCCCeEEEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCChH
Confidence 34556677789999999999999999999999999842 111 1135777777778889999999999
Q ss_pred CCeEEEEEEecCce---eeEEEEEEEe---cCCCccccCCCceEEcCCCeEEEEEEEec-cCCcEEEEEECCEEeecCCc
Q psy7042 1764 DNGDYTCEAYNSVG---FAHTSSRVKI---GTPPRIDRMPNALYIPEGDNTKVKIFYAG-DQPMEVSLTKNGRVVQSDDR 1836 (2245)
Q Consensus 1764 d~G~Y~C~~~n~~g---~~~~~~~l~V---~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~~v~W~~~g~~l~~~~~ 1836 (2245)
|+|.|+|.+.|..+ .......|.| ..+|.+...+....+.+|+.++|.|.+.| .|.+.|.|+|+|..+.....
T Consensus 82 D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~g~~P~~~v~W~k~g~~~~~~~~ 161 (213)
T 3nl4_L 82 DAATYYCQSTYENPTYVSFGGGTEVGVKGDPVAPTVLIFPPSADLVATGTVTIVCVANKYFPDVTVTWEVDGTTQTTGIE 161 (213)
T ss_dssp GCEEEEEEECCSSTTTCEECCCEEEEEECCCBCCEEEEECCCHHHHTTSEEEEEEEEEEEBSCCEEEEEETTEECCSSEE
T ss_pred HCEEEEEecCCCCceeEEeCCCeEEEEeCCCcCCeEEEeCCchhhccCCcEeEEEEEecccCCcEEEEEeCCccCCCCee
Confidence 99999999998766 2333455666 44666655454555667999999999998 89999999999998854210
Q ss_pred eEEE--E-cC----CeEEEEEcccCcccceEEEEEEE
Q psy7042 1837 FKFT--V-LD----DYIIIFIKEIRKEDAGDYTVNLS 1866 (2245)
Q Consensus 1837 ~~~~--~-~~----~~~~l~i~~~~~~d~G~Y~C~a~ 1866 (2245)
.... . .+ ....|.|..+..+|.|.|+|.|.
T Consensus 162 ~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 162 NSKTPQNSADCTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp EEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred cccCcccCCCCeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 0000 0 00 11469999999999999999999
No 307
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.65 E-value=4.9e-16 Score=175.85 Aligned_cols=174 Identities=11% Similarity=0.198 Sum_probs=131.0
Q ss_pred eeccCCceEEcCCCeEEEEEEecCcCCCeEEEeeC--CEecc------------CCceEEEEecCcEEEEEEeeeccCCC
Q psy7042 1700 FIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRN--GREIS------------SGARYRVETAGGVFRLHFNEVTDVDN 1765 (2245)
Q Consensus 1700 ~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~--~~~l~------------~~~~~~~~~~~~~~~L~i~~v~~~d~ 1765 (2245)
+..++ .+.+.+|++++|.|.+. +.+.+.|+|+ +..+. ...|+.+....+..+|.|.+++.+|+
T Consensus 4 v~~~~-~~~v~~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 80 (211)
T 3tv3_L 4 LTQPP-SASGSPGQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDDE 80 (211)
T ss_dssp CBCCS-EEEECTTCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGGC
T ss_pred EEeCc-eEEEcCCCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhHC
Confidence 44455 68899999999999998 7889999994 22221 23577776677788999999999999
Q ss_pred eEEEEEEecCce--eeEEEEEEEec----CCCccccCCCceEEcCCCeEEEEEEEecc--CCcEEEEEECCEEeecCCce
Q psy7042 1766 GDYTCEAYNSVG--FAHTSSRVKIG----TPPRIDRMPNALYIPEGDNTKVKIFYAGD--QPMEVSLTKNGRVVQSDDRF 1837 (2245)
Q Consensus 1766 G~Y~C~~~n~~g--~~~~~~~l~V~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~--p~~~v~W~~~g~~l~~~~~~ 1837 (2245)
|.|+|.+.|..+ .......|.|. .+|.+...+....+.+|+.++|.|.+.|. |.+.+.|+++|+.+......
T Consensus 81 G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~ 160 (211)
T 3tv3_L 81 AVYYCGSLVGNWDVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVET 160 (211)
T ss_dssp EEEEEEEEETTTEEEECCCEEEEECCSCCBCCEEEEECCCHHHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEECTTEEE
T ss_pred EEEEEEEecCCCceeECCCceEEEeCCCCcCCeeEecCCchhhhcCCCeEEEEEeeeecCCCeEEEEEECCeecCCCccc
Confidence 999999999877 34445678887 57777665555555579999999999985 35799999999988542111
Q ss_pred E--EEEcCC----eEEEEEcccCcccceEEEEEEEcCCeeeEEEE
Q psy7042 1838 K--FTVLDD----YIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTF 1876 (2245)
Q Consensus 1838 ~--~~~~~~----~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 1876 (2245)
. ....+. ...|.|..+..+|.|.|+|.|.|..+....++
T Consensus 161 ~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~~~~~~~ 205 (211)
T 3tv3_L 161 TTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTV 205 (211)
T ss_dssp CCCEECTTSSEEEEEEEEECHHHHHHSSCEEEEEEETTEEEEEEE
T ss_pred CCceECCCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCCCEEeec
Confidence 0 000111 14689999999999999999999988766554
No 308
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.65 E-value=8.8e-16 Score=146.46 Aligned_cols=95 Identities=27% Similarity=0.382 Sum_probs=87.5
Q ss_pred CCCceEEeeccceeeecCccEEEEEEEEeeCCCeEEEeeCCEeeCCCC--cEEEEEeCcEEEEEEcCCCCCCCeEEEEEE
Q psy7042 2085 AKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSA--RHHIFAEGDTYTLIINSVYGVDADEYVCRA 2162 (2245)
Q Consensus 2085 ~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~--~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 2162 (2245)
..||.|...+.++.+.+|+.+.|.|.+.|.|.|.|+|+|||+.|.... ++.+..+++...|.|.++..+|+|.|+|.|
T Consensus 3 ~~PP~i~~~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 82 (100)
T 3knb_A 3 GIPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSL 82 (100)
T ss_dssp CEEEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCCEEEeCCCcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEEE
Confidence 347899988999999999999999999999999999999999997654 688888888899999999999999999999
Q ss_pred EeCCceeeEEEEEEEEc
Q psy7042 2163 VNKGGVKSTKAELIIMT 2179 (2245)
Q Consensus 2163 ~N~~G~~~~~~~l~V~~ 2179 (2245)
.|.+|..+.++.|.|+.
T Consensus 83 ~N~~G~~~~~~~l~V~~ 99 (100)
T 3knb_A 83 GNEFGSDSATVNIHIRS 99 (100)
T ss_dssp EETTEEEEEEEEEEEEC
T ss_pred EECCCEEEEEEEEEEEE
Confidence 99999999999999964
No 309
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.64 E-value=1.1e-15 Score=174.18 Aligned_cols=177 Identities=11% Similarity=0.188 Sum_probs=126.7
Q ss_pred ceeccCCceEEcCCCeEEEEEEecCc-CCCeEEEeeCC---Ee------------c-c--CCceEEEEecCcEEEEEEee
Q psy7042 1699 DFIVPLKDLVVPLGKLLTLQCEATGT-PVPKCRWLRNG---RE------------I-S--SGARYRVETAGGVFRLHFNE 1759 (2245)
Q Consensus 1699 ~~~~~~~~~~~~~G~~v~L~C~~~~~-p~~~v~W~~~~---~~------------l-~--~~~~~~~~~~~~~~~L~i~~ 1759 (2245)
.+..++ .+.+.+|++++|.|.+.+. |.+.+.|+|.. .. . . ...|+.+...++..+|.|.+
T Consensus 3 ~v~~~p-~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 81 (218)
T 3s96_B 3 VLTQSS-SASFSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISN 81 (218)
T ss_dssp SEECCS-EEEEETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEESS
T ss_pred eEEeCC-cEEECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEcc
Confidence 455556 7889999999999999998 88999999831 10 0 0 11366666667788899999
Q ss_pred eccCCCeEEEEEEecCce-----eeEEEEEEEec----CCCccccCCCceEEcCCCeEEEEEEEec-cCCc-EEEEEECC
Q psy7042 1760 VTDVDNGDYTCEAYNSVG-----FAHTSSRVKIG----TPPRIDRMPNALYIPEGDNTKVKIFYAG-DQPM-EVSLTKNG 1828 (2245)
Q Consensus 1760 v~~~d~G~Y~C~~~n~~g-----~~~~~~~l~V~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~v~W~~~g 1828 (2245)
++.+|+|.|+|.+.|..| .......|.|. .+|.+...+.......|+.++|.|.+.| .|.+ .|.|+|+|
T Consensus 82 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~~~~v~L~C~~~g~~p~~~~v~W~k~g 161 (218)
T 3s96_B 82 IQPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVFPPSSEELKENKATLVCLISNFSPSGVTVAWKANG 161 (218)
T ss_dssp CCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETT
T ss_pred CCcccCEEEEEEEecCCCCceeEEEcCcEEEEEecCCCCCceEEeeCCCcccccCCcEEEEEEECcccCCCeEEEEEECC
Confidence 999999999999998876 23334677776 4566655444444556799999999998 5666 89999999
Q ss_pred EEeecCCceEE-EE-cCC---eEEEEEcccCcccceEEEEEEEcCCeeeEEEE
Q psy7042 1829 RVVQSDDRFKF-TV-LDD---YIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTF 1876 (2245)
Q Consensus 1829 ~~l~~~~~~~~-~~-~~~---~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 1876 (2245)
..+........ .. .+. ...|.|.....+|.|.|+|.|.|..+.....+
T Consensus 162 ~~l~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~ 214 (218)
T 3s96_B 162 TPITQGVDTSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGDTVEKSL 214 (218)
T ss_dssp EEC--------------CEEEEEEEEEEHHHHHTCSCEEEEEEETTEEEEEEE
T ss_pred EECcCceecCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCCcccccc
Confidence 98865321110 00 111 13478888888899999999999988766543
No 310
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=99.64 E-value=2.8e-16 Score=178.14 Aligned_cols=199 Identities=18% Similarity=0.152 Sum_probs=153.8
Q ss_pred eeCCCCCCCCCeeeeecCCcEEEEeeCCCCCCCcccccEEEEeeeCCCCCeEEE-ceeeeeeEEEecC-CCCCEEEEEEE
Q psy7042 666 ISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRV-GNTRFTTMAITGL-SPGHQYEFRVY 743 (2245)
Q Consensus 666 v~~~P~~p~~~~~~~~~~~si~lsW~~p~~~~~~~~~~y~v~~~~~~~~~w~~~-~~~~~~~~~i~~L-~p~t~y~~~v~ 743 (2245)
+..+|.+|.++.+...+.+++.|+|++|...+ ...+|.|+++......+... .......+.+.+| .+++.|.|+|.
T Consensus 4 ~g~pP~~P~~l~~~~~~~~sv~l~W~~p~~~~--~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~t~Y~~~V~ 81 (215)
T 1bqu_A 4 SGLPPEKPKNLSCIVNEGKKMRCEWDGGRETH--LETNFTLKSEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVE 81 (215)
T ss_dssp -CCCCCCCEEEEEEEETTSCCEEEEECCSCCS--SCCEEEEEEEETTEECCCEECCSSCTTEEECSSCCCTTSCEEEEEE
T ss_pred cCCCCCCCEeeEeEECCCCcEEEEcCCCCCCC--CCceEEEEEEEcCCCccccccccCCcceEEEcCCccccccEEEEEE
Confidence 34689999999999999899999999876543 24799999986543222221 2233468999999 99999999999
Q ss_pred EEecccCCCCCCCCccEEecCccccccccccccccCCCceeecccccccccCCceEEEEeeeccCccccccccceecccc
Q psy7042 744 AENVYGRSDPSTTSDLITTKDTFKKQIKKRQYDFDETGKKIRGKADEKVSDYDQYVFDIYSKYVPQPVDIKTSSVYDHYD 823 (2245)
Q Consensus 744 a~n~~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 823 (2245)
|.|..|.+. +....+ .+.
T Consensus 82 A~n~~G~~~-s~~~~~-~~~------------------------------------------------------------ 99 (215)
T 1bqu_A 82 AENALGKVT-SDHINF-DPV------------------------------------------------------------ 99 (215)
T ss_dssp EEETTEEEE-CCCEEE-CGG------------------------------------------------------------
T ss_pred EEecccCcc-CCcEEe-ccc------------------------------------------------------------
Confidence 999999754 211000 000
Q ss_pred cccccccCceeEEEEeeecccCCeeEEEeeccCCchhhhhhheeeeeeeccCCCceEeecccccCCcceEEEEEEecCCC
Q psy7042 824 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFEVLDRPH 903 (2245)
Q Consensus 824 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 903 (2245)
....|.
T Consensus 100 --------------------------------------------------------------------------~~~~p~ 105 (215)
T 1bqu_A 100 --------------------------------------------------------------------------YKVKPN 105 (215)
T ss_dssp --------------------------------------------------------------------------GSEECC
T ss_pred --------------------------------------------------------------------------ccCcCC
Confidence 002578
Q ss_pred CCcccEEeee--eCceEEEEecCCCCCCCCccceEEEeeeecCCCceEEecc---eeeeceEEEecCCCCceeeEEEEEE
Q psy7042 904 PPENLHADEF--AGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSS---YVTTPFVRVRNLAIGSTYEFRVMAE 978 (2245)
Q Consensus 904 ~p~~l~~~~~--~~~~~~l~W~~p~~~~g~~i~~y~i~~~~~~~~~~~~~~~---~~~~~~~~i~~L~p~~~y~~~v~a~ 978 (2245)
+|.++.+... +.+++.|+|++|...+| .+.+|+|+|+..+...|..+.. ....+.+.|.+|.|++.|.|+|+|.
T Consensus 106 pP~~~~~~~~~~~~~sv~l~W~~p~~~~~-~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~ 184 (215)
T 1bqu_A 106 PPHNLSVINSEELSSILKLTWTNPSIKSV-IILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCM 184 (215)
T ss_dssp CCEEEEEECC--CCSCEEEEEECCGGGGT-SCEEEEEEEEETTCSSCEECCGGGGCSCCSEEEECSCCSSEEEEEEEEEE
T ss_pred CCCceEEEEecCCCceEEEEEeCCCCCCc-ceEEEEEEEccCCCCCceEeccccccCccceEEeCCCCCCCEEEEEEEEc
Confidence 8999888765 67899999999877655 8999999999987778887753 4567899999999999999999999
Q ss_pred eccccCCCccccCcccccCCCCCCC
Q psy7042 979 NQYGLSKPALTIDPIKAKHPFDVPG 1003 (2245)
Q Consensus 979 n~~g~~~~s~~~~~~~~~t~~~~p~ 1003 (2245)
|..|.|.+|..+..+.+.|++.+|.
T Consensus 185 n~~g~g~~S~~S~~~~~~T~~~~P~ 209 (215)
T 1bqu_A 185 KEDGKGYWSDWSEEASGITYEDRPS 209 (215)
T ss_dssp ETTSCSCCCCCCCCEEEEECCCHHH
T ss_pred cCCCCCccCCCCCcccccccccCCc
Confidence 9999999888888888888877765
No 311
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.64 E-value=9.7e-17 Score=183.17 Aligned_cols=181 Identities=14% Similarity=0.112 Sum_probs=129.5
Q ss_pred CcceEEeCCCeEEEEEEEee-ecCCc----eEEEECCeeccC-------------CCeEEEEE-----cCcEEEEEEeee
Q psy7042 97 LKDLVVPLGKLLTLQCEATG-TPVPK----CRWLRNGREISS-------------GARYRVET-----AGGVFRLHFNEV 153 (2245)
Q Consensus 97 ~~~~~v~~G~~v~L~C~~~g-~p~~~----i~W~~~g~~l~~-------------~~~~~~~~-----~~~~~~L~i~~~ 153 (2245)
|..+.+.+|++++|.|.+.+ .+.+. |.|+|++..... .+|+.+.. ..+..+|.|.++
T Consensus 6 p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v 85 (221)
T 3eow_R 6 PTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGL 85 (221)
T ss_dssp CCCCCCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCS
T ss_pred CCcEEEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccC
Confidence 44567789999999999954 45444 999998753211 34555554 123447999999
Q ss_pred ccCCCeEEEEEEEcCc-ccceeEEEEEecCCCeeecCCCceEEcCCCeE-EEEEEEe-cCCCceEEEeeCceeeecCCce
Q psy7042 154 TDVDNGDYTCEAYNSV-GFAHTSSRVKIGTPPRIDRMPNALYIPEGDNT-KVKIFYA-GDQPMEVSLTKNGRVVQSDDRF 230 (2245)
Q Consensus 154 ~~~d~G~Y~C~a~n~~-g~~~~~~~l~V~~~P~~~~~~~~~~v~~G~~~-~l~C~~~-g~p~~~i~W~~~g~~l~~~~~~ 230 (2245)
+.+|+|.|+|.|.+.. |.....+.|.|..+|.+...+.... .+|+.+ .|.|.+. |.|.|.|+|+|++.........
T Consensus 86 ~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~P~~~~~~~~~~-~~g~~~~~l~C~~~~g~P~p~v~W~k~~~~~~~~~~~ 164 (221)
T 3eow_R 86 RVEDEGSYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQ-LTGEPVPMARCVSTGGRPPAQITWHSDLGGMPQTSQV 164 (221)
T ss_dssp SCCCCSCBEEEEEESSSCSCEEECCCCCCCCCEEEEEEECCC-CCSSSCCEEEEEEESCSSCCCEEEECSSSCCCCCEEE
T ss_pred ChHHCeEEEEEEEeCCCCceEEEEEEEEEECCCceeecCCcc-cCCceEEEEEEECCCccCCCeeEEEeCCCCCCcccee
Confidence 9999999999999976 7777888999999998875543333 678888 5999987 8999999999975443221110
Q ss_pred EEEEe---CCeEEEEEcccCccCceeEEEEEEcCCcceEEEEEEEEecCCCCC
Q psy7042 231 KFTVL---DDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPP 280 (2245)
Q Consensus 231 ~~~~~---~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~ 280 (2245)
..... ...+.|.|.++..+|+|.|+|.|.|..+.. ...+.|...|..+
T Consensus 165 ~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~~--~~~~~v~~~~~~~ 215 (221)
T 3eow_R 165 PGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFEK--PQLLTVSLTVYYP 215 (221)
T ss_dssp CCCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCSSS--CEEEEECCCCCC-
T ss_pred ecCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCCC--CeEEEEEEEEEcc
Confidence 00001 123579999999999999999999998764 4445555555433
No 312
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.64 E-value=2.8e-16 Score=172.53 Aligned_cols=157 Identities=17% Similarity=0.169 Sum_probs=120.5
Q ss_pred CCCceeccCCceEEcCCCeEEEEEEecCcCCCeEEEeeCCEeccCCceEEEEecCcEEEEEEeeeccCCCeEEEEEEecC
Q psy7042 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNS 1775 (2245)
Q Consensus 1696 ~~p~~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~ 1775 (2245)
.+|.+...+.. .+.+|++++|.|.+.+ +.+.+.|+|+|... ...+ ..|.|.+++.+|+|.|+|.+.|.
T Consensus 7 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~~--------~~~~--~~L~i~~v~~~D~G~Y~C~a~n~ 74 (184)
T 2gi7_A 7 PKPSLQALPSS-LVPLEKPVTLRCQGPP-GVDLYRLEKLSSSR--------YQDQ--AVLFIPAMKRSLAGRYRCSYQNG 74 (184)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECST-TCSEEEEEETTTCC--------EESS--SEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCeEEeCCCc-cccCCCcEEEEEeCCC-CCCEEEEEECCccc--------cCcc--cEEEECcCChhhCceEEEEEEcC
Confidence 57777776664 7999999999999988 77899999998751 1122 24999999999999999999998
Q ss_pred ceee--EEEEEEEec---CCCccccCCCceEEcCCCeEEEEEEEeccCCcEEEEEECCEEeecCCceEEEEcCCeEEEEE
Q psy7042 1776 VGFA--HTSSRVKIG---TPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFI 1850 (2245)
Q Consensus 1776 ~g~~--~~~~~l~V~---~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~l~i 1850 (2245)
.|.. ...+.|.|. .+|.+...+ ...+.+|++++|.|.+.+.| +.+.|+|+|..+...... ......|.|
T Consensus 75 ~g~~~~s~~~~l~V~~~~~~p~i~~~p-~~~v~~G~~v~l~C~~~~~~-~~~~w~k~g~~~~~~~~~----~~~~~~L~i 148 (184)
T 2gi7_A 75 SLWSLPSDQLELVATGVFAKPSLSAQP-GPAVSSGGDVTLQCQTRYGF-DQFALYKEGDPAPYKNPE----RWYRASFPI 148 (184)
T ss_dssp TEEBCCCCCEEEEEESSSCCCEEEEEC-CCSSCCTTCEEEEEECSSCC-CEEEEEECCCCTTSCCCC----EEEEESSSE
T ss_pred CCccCCCCCEEEEecCcCCCCEEEeCC-CceecCCCcEEEEEEcCCCC-cEEEEEECCCcCcceecC----CCceEEEEE
Confidence 7643 334667773 356665544 45677899999999987655 699999999877543211 123356899
Q ss_pred cccCcccceEEEEEEEcCCe
Q psy7042 1851 KEIRKEDAGDYTVNLSNSSG 1870 (2245)
Q Consensus 1851 ~~~~~~d~G~Y~C~a~n~~g 1870 (2245)
.++..+|+|.|+|.|.|..+
T Consensus 149 ~~v~~~D~G~Y~C~a~n~~~ 168 (184)
T 2gi7_A 149 ITVTAAHSGTYRCYSFSSRD 168 (184)
T ss_dssp EEETTCCSEEEEEEEECTTS
T ss_pred ccCCccCCeEEEEEEEeCCC
Confidence 99999999999999999864
No 313
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.64 E-value=2.5e-16 Score=172.77 Aligned_cols=145 Identities=14% Similarity=0.193 Sum_probs=110.6
Q ss_pred eEEcCCCeEEEEEEecCcCCCeEEEeeCCEeccCCceEEEEecCcEEEEEEee-eccCCCeEEEEEEecCceeeEEEEEE
Q psy7042 1707 LVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNE-VTDVDNGDYTCEAYNSVGFAHTSSRV 1785 (2245)
Q Consensus 1707 ~~~~~G~~v~L~C~~~~~p~~~v~W~~~~~~l~~~~~~~~~~~~~~~~L~i~~-v~~~d~G~Y~C~~~n~~g~~~~~~~l 1785 (2245)
....+|+++.|.|.+.+ +. .+.|+|+|..+.... ++ +|.|.+ ++.+|+|.|+|.|.|..|.......+
T Consensus 9 ~v~~~G~~v~L~C~~~~-~~-~i~W~k~g~~l~~~~-------~~--~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~ 77 (186)
T 1jbj_A 9 KVSISGTSVELTCPLDS-DE-NLKWEKNGQELPQKH-------DK--HLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKA 77 (186)
T ss_dssp EEEEETTEEEEECSSCC-CT-TCEEEETTEEECSCC-------CS--EEEEESCCTTTSCEEEEEECSSCCCCCCEEECC
T ss_pred EEEeCCcEEEEEEeCCC-CC-ceEEEECCEECCCCC-------CC--EEEECCCCccccCEEEEEEEEeCCCcEEEEEEE
Confidence 34578999999999987 44 499999999986531 11 499999 99999999999999998875555555
Q ss_pred EecC--CCcc----------------ccC----CCc---eEEcCCCeEEEEEEEeccCCcEEEEEECCEEeecCCceEEE
Q psy7042 1786 KIGT--PPRI----------------DRM----PNA---LYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFT 1840 (2245)
Q Consensus 1786 ~V~~--~p~~----------------~~~----~~~---~~~~~g~~~~l~C~~~~~p~~~v~W~~~g~~l~~~~~~~~~ 1840 (2245)
.|.. +|.. ... ... ..+.+|+++.|.|.+ |.+.|.|+|+|+.+.....
T Consensus 78 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~---p~p~i~W~k~g~~i~~~~~---- 150 (186)
T 1jbj_A 78 RVGSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGL---TDKTIKWLKDGSIISPLNA---- 150 (186)
T ss_dssp CCCSCCCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSS---SCSCEEEEETTEECCCSSC----
T ss_pred EEecccccccccccccccccCCccccccccccccccccceecCCCCeEEEEeeC---CCCeEEEEECCEECcccCC----
Confidence 4432 2211 000 001 123489999999998 7889999999999864322
Q ss_pred EcCCeEEEEEcccCcccceEEEEEEEcCCeee
Q psy7042 1841 VLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV 1872 (2245)
Q Consensus 1841 ~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~ 1872 (2245)
....|.|.++..+|+|.|+|.|.|..|..
T Consensus 151 ---~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 151 ---TKNTWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp ---CSSCCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred ---CcceEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 33479999999999999999999999876
No 314
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.64 E-value=5.2e-16 Score=181.90 Aligned_cols=189 Identities=11% Similarity=0.247 Sum_probs=120.2
Q ss_pred CCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEEC--Ceecc---C-C--------------CeEEE-EEcCcEEEE
Q psy7042 90 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRN--GREIS---S-G--------------ARYRV-ETAGGVFRL 148 (2245)
Q Consensus 90 ~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~--g~~l~---~-~--------------~~~~~-~~~~~~~~L 148 (2245)
+|.++..|..+.+.+|++|+|.|.+.+.|.+.|.|+|. +.... . . .++.. ....+..+|
T Consensus 2 s~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 81 (259)
T 3omz_A 2 SSNLEGRTKSVIRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRM 81 (259)
T ss_dssp ---------CEEEETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEE
T ss_pred ccccccCCceeEecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEE
Confidence 46777888889999999999999999988889999982 21110 0 0 11111 112234479
Q ss_pred EEeeeccCCCeEEEEEEEcCcc---cceeEEEEEecC-----------------CCeeecCCCceEEcCCCeEEEEEEEe
Q psy7042 149 HFNEVTDVDNGDYTCEAYNSVG---FAHTSSRVKIGT-----------------PPRIDRMPNALYIPEGDNTKVKIFYA 208 (2245)
Q Consensus 149 ~i~~~~~~d~G~Y~C~a~n~~g---~~~~~~~l~V~~-----------------~P~~~~~~~~~~v~~G~~~~l~C~~~ 208 (2245)
.|.+++.+|+|.|.|.|.|..+ .....+.|.|.. +|.+...|..+.+.+|++++|.|.+.
T Consensus 82 ~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~ 161 (259)
T 3omz_A 82 ILRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSSVSMPVRKAVTLNCLYE 161 (259)
T ss_dssp EESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCCCCEEEETTCCEEECCEEE
T ss_pred EECCCCcccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeCCEEEEcCCCCEEEEEECC
Confidence 9999999999999999999876 233356677776 35677888889999999999999988
Q ss_pred cC-CCceEEEeeCc--eeee------------cCCceEEE--EeCCeEEEEEcccCccCceeEEEEEEcCC---cc--eE
Q psy7042 209 GD-QPMEVSLTKNG--RVVQ------------SDDRFKFT--VLDDYIIIFIKEIRKEDAGDYTVNLSNSS---GS--VS 266 (2245)
Q Consensus 209 g~-p~~~i~W~~~g--~~l~------------~~~~~~~~--~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~---g~--~~ 266 (2245)
+. |.+.+.|||.+ ..+. ...++.+. .......|.|.+++.+|+|.|.|.+.+.. +. .-
T Consensus 162 ~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~fg 241 (259)
T 3omz_A 162 TSWWSYYIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISALQLEDSAKYFCALGESLTRADKLIFG 241 (259)
T ss_dssp CCCSSCEEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESSCCGGGCSEEEEEEESCSSTTCCCEEC
T ss_pred CccCCceEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCCChhHCEEEEEEEeCccCCCCceEEC
Confidence 74 78999999843 2111 12334333 12334579999999999999999998532 11 12
Q ss_pred EEEEEEEecCCC
Q psy7042 267 GTFTINITGLPG 278 (2245)
Q Consensus 267 ~~~~l~V~~~p~ 278 (2245)
.-..|.|...+.
T Consensus 242 ~GT~l~v~~~~~ 253 (259)
T 3omz_A 242 KGTRVTVEPRSQ 253 (259)
T ss_dssp CCEEEEEEC---
T ss_pred CCCEEEEeeCcc
Confidence 345677765543
No 315
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.64 E-value=1.6e-15 Score=177.10 Aligned_cols=180 Identities=17% Similarity=0.241 Sum_probs=131.4
Q ss_pred CceEEcCCCeEEEEEEecCcC--CCeEEEeeC--CEecc----------------CCceEEEEec--CcEEEEEEeeecc
Q psy7042 1705 KDLVVPLGKLLTLQCEATGTP--VPKCRWLRN--GREIS----------------SGARYRVETA--GGVFRLHFNEVTD 1762 (2245)
Q Consensus 1705 ~~~~~~~G~~v~L~C~~~~~p--~~~v~W~~~--~~~l~----------------~~~~~~~~~~--~~~~~L~i~~v~~ 1762 (2245)
..+.+.+|++++|.|.+.+.| .+.+.|+|+ +..+. ...|+.+..+ ++..+|+|.+++.
T Consensus 8 ~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 87 (257)
T 1f3r_B 8 GPGLVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSLQT 87 (257)
T ss_dssp CCSEECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESCCT
T ss_pred CCccccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCCc
Confidence 346799999999999998875 678999985 22110 1356666543 5678899999999
Q ss_pred CCCeEEEEEEecCce-------ee--EEEEEEEecCCC---------------ccccCCCceEEcCCCeEEEEEEEeccC
Q psy7042 1763 VDNGDYTCEAYNSVG-------FA--HTSSRVKIGTPP---------------RIDRMPNALYIPEGDNTKVKIFYAGDQ 1818 (2245)
Q Consensus 1763 ~d~G~Y~C~~~n~~g-------~~--~~~~~l~V~~~p---------------~~~~~~~~~~~~~g~~~~l~C~~~~~p 1818 (2245)
+|+|.|+|.+.|..| .. .....|.|..+| .+...+..+.+.+|++++|.|.+.+.|
T Consensus 88 ~DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~ 167 (257)
T 1f3r_B 88 DDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRVTLSCKGSQNI 167 (257)
T ss_dssp TCCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCTTCCEEEEEECSSCC
T ss_pred ccCEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcCCCCEEEEEEECCcC
Confidence 999999999999854 11 134578887653 234445667788999999999999998
Q ss_pred CcEEEEEE--CCEEee------------cCCceEEEEcCCeEEEEEcccCcccceEEEEEEEcCCeeeEEEEEEEEeCCC
Q psy7042 1819 PMEVSLTK--NGRVVQ------------SDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLP 1884 (2245)
Q Consensus 1819 ~~~v~W~~--~g~~l~------------~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p 1884 (2245)
.+.+.|+| +|..+. ...++.+........|.|.++..+|+|.|+|.|.|....-.....|.|...+
T Consensus 168 ~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~g~gt~l~V~~~~ 247 (257)
T 1f3r_B 168 NNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATYFCYQYNNGYTFGAGTKLELKAAE 247 (257)
T ss_dssp BTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSEEEEEEESSSEEECCCCEECCSSSC
T ss_pred CCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCEEEEEEEeCCCCeECCCEEEEEeCCC
Confidence 88999999 555331 1345555545566789999999999999999999975212223455565443
No 316
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.64 E-value=3.9e-16 Score=179.65 Aligned_cols=178 Identities=13% Similarity=0.129 Sum_probs=127.5
Q ss_pred cceEEeCCCeEEEEEEEeeecCC---ceEEEECCeeccC----------------CCeEEEE-------EcCcEEEEEEe
Q psy7042 98 KDLVVPLGKLLTLQCEATGTPVP---KCRWLRNGREISS----------------GARYRVE-------TAGGVFRLHFN 151 (2245)
Q Consensus 98 ~~~~v~~G~~v~L~C~~~g~p~~---~i~W~~~g~~l~~----------------~~~~~~~-------~~~~~~~L~i~ 151 (2245)
.++.+..|++|+|.|.+.+.|.+ .|.|+|++..+.. ..+..+. ...+..+|.|.
T Consensus 9 ~~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~ 88 (225)
T 4fmk_A 9 PEVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAFR 88 (225)
T ss_dssp SEEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEEC
T ss_pred CEEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEEc
Confidence 45788999999999999887765 3899997654320 1122211 11223469999
Q ss_pred eeccCCCeEEEEEEEcCccccee-EEEEEecCCCeeecCCCceEEcCCCeEEEEEEE-ecCCCceEEEeeCceeeecCCc
Q psy7042 152 EVTDVDNGDYTCEAYNSVGFAHT-SSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFY-AGDQPMEVSLTKNGRVVQSDDR 229 (2245)
Q Consensus 152 ~~~~~d~G~Y~C~a~n~~g~~~~-~~~l~V~~~P~~~~~~~~~~v~~G~~~~l~C~~-~g~p~~~i~W~~~g~~l~~~~~ 229 (2245)
+++.+|+|.|+|.|.|..+.... ...+.+..+|.+...+......+++.+.+.|.+ .+.|++.+.|++++..+.....
T Consensus 89 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~P~~~~~w~~~~~~~~~~~~ 168 (225)
T 4fmk_A 89 GLRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQPENHAEAQEVTIGPQSVAVARCVSTGGRPPARITWISSLGGEAKDTQ 168 (225)
T ss_dssp SCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECCBCCSSSCEEEEEEEEEEEBSCCEEEEECSSCCEEEEEE
T ss_pred cCCHHHCcceEEEEEeCCCcceeeeeeeeeecCCceeecccceeecceeeeeeeeeecCCCCCCEEEEEECCccccCCcc
Confidence 99999999999999988775554 556777778877776666777788888888875 5688999999998876543322
Q ss_pred eEEEEeCC---eEEEEEcccCccCceeEEEEEEcCCcceE--EEEEEEEec
Q psy7042 230 FKFTVLDD---YIIIFIKEIRKEDAGDYTVNLSNSSGSVS--GTFTINITG 275 (2245)
Q Consensus 230 ~~~~~~~~---~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~--~~~~l~V~~ 275 (2245)
......+. .+.|.|.++..+|+|.|+|.|.|.+|... .+++|.|..
T Consensus 169 ~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~~~~~v~l~V~Y 219 (225)
T 4fmk_A 169 EPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPILLPVTLSVRY 219 (225)
T ss_dssp EECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCBTT
T ss_pred eEEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeEEEEEEEEEEEE
Confidence 21111111 24699999999999999999999987654 455555543
No 317
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.64 E-value=4e-15 Score=173.14 Aligned_cols=178 Identities=17% Similarity=0.261 Sum_probs=134.9
Q ss_pred CCceEEcCCCeEEEEEEecCcC--CCeEEEeeC--CEec-----------------cCCceEEEEec--CcEEEEEEeee
Q psy7042 1704 LKDLVVPLGKLLTLQCEATGTP--VPKCRWLRN--GREI-----------------SSGARYRVETA--GGVFRLHFNEV 1760 (2245)
Q Consensus 1704 ~~~~~~~~G~~v~L~C~~~~~p--~~~v~W~~~--~~~l-----------------~~~~~~~~~~~--~~~~~L~i~~v 1760 (2245)
+..+.+.+|++++|.|.+.+.| .+.+.|+|+ +..+ ....|+.+..+ ++..+|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (256)
T 1nqb_A 7 SGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSSL 86 (256)
T ss_dssp CCCEEECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeeecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEECcC
Confidence 4557899999999999998875 678999984 2221 01256666543 56788999999
Q ss_pred ccCCCeEEEEEEecCcee-----eEEEEEEEecCCCccccCCCceEEcCCCeEEEEEEEeccCCc-----EEEEEE--CC
Q psy7042 1761 TDVDNGDYTCEAYNSVGF-----AHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPM-----EVSLTK--NG 1828 (2245)
Q Consensus 1761 ~~~d~G~Y~C~~~n~~g~-----~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-----~v~W~~--~g 1828 (2245)
+.+|+|.|.|.+.|..|. ......|.|..+|.+...+..+.+.+|++++|.|.+.+.|.+ .+.|+| +|
T Consensus 87 ~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g 166 (256)
T 1nqb_A 87 TSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVSSDIELTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPG 166 (256)
T ss_dssp CGGGCEEEEEEECCTTSSSSCSEECCCEEEEECCCCCEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTT
T ss_pred ChhhCEEEEEEEeeccCccceeEEcCceeeeecccccEEecCcEEEEecCCcEEEEeEecCcccccccceEEEEEEECCC
Confidence 999999999999998652 223467888888887777888899999999999999998765 999999 66
Q ss_pred EEee------------cCCceEEEEcCCeEEEEEcccCcccceEEEEEEEcCCeee-EEEEEEEEe
Q psy7042 1829 RVVQ------------SDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV-SGTFTINIT 1881 (2245)
Q Consensus 1829 ~~l~------------~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~v~ 1881 (2245)
+.+. ...++..........|.|.++..+|+|.|+|.|.|..+.. .....|.|.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~ 232 (256)
T 1nqb_A 167 QSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEIK 232 (256)
T ss_dssp SCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred CCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCEEEEEEEccCCceEECCCEEEEEE
Confidence 5431 1345555555566789999999999999999999864321 223456664
No 318
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.63 E-value=1.3e-15 Score=174.92 Aligned_cols=120 Identities=7% Similarity=0.012 Sum_probs=60.6
Q ss_pred cccccccceeeEEEEeccCcCeEEEEeCCeecCCCccEEEEeeC-CeEEEEEecccccCCceEEEEEEeCCC-----CCC
Q psy7042 490 ANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEG-DTYTLIINSVYGVDADEYVCRAVNKGG-----VKS 563 (2245)
Q Consensus 490 ~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~~~~~~~~-~~~~L~i~~v~~~d~G~Y~C~a~n~~g-----~~~ 563 (2245)
..+.+|++++|.|.+.+.+ +.+.|+|+|..+....+......+ ....|.|.+++ |+|.|+|.|.|..+ ..+
T Consensus 116 ~~V~~G~~vtL~C~~~~~~-~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~--D~G~Y~C~a~~~~~p~~~s~~S 192 (257)
T 1b6u_A 116 PTVLAGESVTLSCSSRSSY-DMYHLSREGEAHERRFSAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFRDSPYEWSNSS 192 (257)
T ss_dssp TTCBTTCEEEEEEECSSCC-SEEEEEETTSSCEECCBCBCCSSSCCBEEEEEEECC--SCEEEEEEEECSSCTTBBCCCC
T ss_pred CccCCCCEEEEEEeCCCCC-cEEEEEECCcccCcccccccccCCceeEEEEecccc--cCEEEEEEEEcCCCCcccccCC
Confidence 3567999999999998854 789999999876543322222221 24589999998 99999999998643 234
Q ss_pred cceeEeEecCCCCCCCCCcccceEeeCCCeEEEEEeeeecCCCeEEEEeCCe
Q psy7042 564 TKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNE 615 (2245)
Q Consensus 564 ~~~~l~v~~~p~~~~~p~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~~~ 615 (2245)
..+.|.|..+|.+..++. .......|..+.|.|.+ |.+.+.|.|...+-
T Consensus 193 ~pl~L~V~g~p~~~~p~~--~~~~~~~g~~~~l~~~~-~~~~~~~~~~~~~~ 241 (257)
T 1b6u_A 193 DPLLVSVTGNPSNSWPSP--TEPSSETGNPRHLHAAA-EQKLISEEDLNLDL 241 (257)
T ss_dssp CCEEECCBCCC-----------------------------------------
T ss_pred CCEEEEEeccCCCCCCCC--cccCccCCCeEEEEEEE-cchHHHHHHhhhhh
Confidence 557888888877653322 11224568889999766 67778899987653
No 319
>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A
Probab=99.63 E-value=3.9e-15 Score=187.37 Aligned_cols=285 Identities=15% Similarity=0.128 Sum_probs=177.0
Q ss_pred CCCCCcccEEeeeeCceEEEEecCCCCCCC-----CccceEEEeeeecCCCceEEecce-eeeceEEEe--cCCCCceee
Q psy7042 901 RPHPPENLHADEFAGDSLTLYWTPPRDNGG-----SEITNYVVEKKDYNSTVWTKVSSY-VTTPFVRVR--NLAIGSTYE 972 (2245)
Q Consensus 901 ~P~~p~~l~~~~~~~~~~~l~W~~p~~~~g-----~~i~~y~i~~~~~~~~~~~~~~~~-~~~~~~~i~--~L~p~~~y~ 972 (2245)
.|.||.+|.+.... ..+.|+|++|..... .....|+|+|+..+ ..|..+... .....+.+. +|.|++.|.
T Consensus 108 ~p~pP~~l~v~~~~-~~~~l~W~~p~~~~~~~~~~~~~l~Y~v~yr~~~-~~w~~~~~~~~~~~~~~~~~~~L~p~~~Y~ 185 (419)
T 2gys_A 108 QPPEPRDLQISTDQ-DHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQ-DSWEDAAILLSNTSQATLGPEHLMPSSTYV 185 (419)
T ss_dssp CCCCCEEEEEEEET-TEEEEEEECCC-----CCSCGGGEEEEEEEEETT-SCSTTCEEEEESSSEEEECTTTCCTTCEEE
T ss_pred cCCCCCceEEEecC-CeEEEEECCCccccccchhccCceEEEEEEccCC-CChhheeeecccceEEEechhhcCCCCeEE
Confidence 78899999988765 699999999864321 25678999999875 666544332 233455666 999999999
Q ss_pred EEEEEEecc---ccCCCccccCcccccCCCCCCCCCCCCeeEeecCCeEEEEecCCCCCCCCccceEEEEEEecCC----
Q psy7042 973 FRVMAENQY---GLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISD---- 1045 (2245)
Q Consensus 973 ~~v~a~n~~---g~~~~s~~~~~~~~~t~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~y~v~~~~~~~---- 1045 (2245)
++|+|.+.. +.|.+|..+..+.+.+++..|.+|.++.....+.+++.+.|+++....+ -..|.|.|+....
T Consensus 186 ~rVra~~~~g~~~~G~wS~WS~~~~~~t~~~~~~~p~~l~c~~~~~~~l~c~W~~~~~~~~--~~~y~l~y~~~~~~g~~ 263 (419)
T 2gys_A 186 ARVRTRLAPGSRLSGRPSKWSPEVCWDSQPGDEAQPQNLECFFDGAAVLSCSWEVRKEVAS--SVSFGLFYKPSPDAGSA 263 (419)
T ss_dssp EEEEEEECTTSSCCBCCCCCCCCEEEECCCCCTTSCEEEEEEECSSSEEEEEEEEEHHHHT--TCCEEEEEECC-----C
T ss_pred EEEEEecCCCCCCCcccCCCCCceeeeccccccCCCceEEEEECCceEEEeEEECCCCCCC--ceeEEEEEEecCccccc
Confidence 999999965 4578888888888888888888999999998888999999998632111 2459999986532
Q ss_pred --ccceeccccccCCcceeEEEEeecccccCCccCchhhhhhhhhcccccccccccCCcEEEEEEEEEecCCCCCCCCCC
Q psy7042 1046 --DKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSS 1123 (2245)
Q Consensus 1046 --~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~v~A~n~~G~~~~s~~~ 1123 (2245)
..+..|...........+.. ..+...+.+|.+.+.|.++|.|.+..|.
T Consensus 264 ~~~~~~~C~~~~~~~~~~~~~~-----------------------~~c~~~~~~l~~~~~y~i~V~a~~~~~~------- 313 (419)
T 2gys_A 264 VLLREEECSPVLREGLGSLHTR-----------------------HHCQIPVPDPATHGQYIVSVQPRRAEKH------- 313 (419)
T ss_dssp CCCCCEECCCEEEECCTTTEEE-----------------------EEEEEECSCTTTCCEEEEEEEECCCCEE-------
T ss_pred cCcccccCCCcccccCCCccee-----------------------EEeEEECccCCccCEEEEEEEEccCCcc-------
Confidence 11333321111000000000 0000146677777788888777532210
Q ss_pred cceeecCCCCCCccccCCCceeEEEEcCCeEEEEEEeeecCCCcceEEeCCeecCCCCcEEEEEccceEEEEecCccccc
Q psy7042 1124 DIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAKRAT 1203 (2245)
Q Consensus 1124 ~~~~~~~~p~~p~~~~~~~~~~~~v~~~~~~~l~~~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1203 (2245)
.. | ...
T Consensus 314 --~~-------~---------------------------------------------------------------~~~-- 319 (419)
T 2gys_A 314 --IK-------S---------------------------------------------------------------SVN-- 319 (419)
T ss_dssp --EE-------G---------------------------------------------------------------GGS--
T ss_pred --cc-------c---------------------------------------------------------------eEE--
Confidence 00 0 000
Q ss_pred cceeEEEEEEcCCcceeEEEEEEEECCCCCCCCCceeeeccCCcEEEEecCCCCCCCcceeeeEEEEeeccccceEEc--
Q psy7042 1204 DSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKL-- 1281 (2245)
Q Consensus 1204 ~~~~Y~~~a~n~~g~~~~s~~~~v~~~p~~p~~~~~~~~~~~~s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~~~~~~-- 1281 (2245)
..|.|| .+.+.. ...++.|+|++|....+..+.+|.|.|+... ..|...
T Consensus 320 -------------------------v~p~PP--~l~v~~-~~~~l~l~W~~P~~~~~~~~l~Yev~y~~~~-~~w~~~~~ 370 (419)
T 2gys_A 320 -------------------------IQMAPP--SLQVTK-DGDSYSLRWETMKMRYEHIDHTFEIQYRKDT-ATWKDSKT 370 (419)
T ss_dssp -------------------------BCCCCC--EEEEC----CCCEEEEEC--------CEEEEEEEECSS-SCSTTSCE
T ss_pred -------------------------EEECCC--CeEEEE-eCCeEEEEECCCcccccccceEEEEEEEcCC-CCcceeec
Confidence 012222 244444 3578999999985422324779999998764 334321
Q ss_pred ccceecceEEecCCCCCceEEEEEEEecccc--CCCCcccCCc
Q psy7042 1282 SSFVRSPAYDVFGLETNRQYRFRVRAENQYG--VSEPLELDNS 1322 (2245)
Q Consensus 1282 ~~~~~~~~~~l~~L~~~t~Y~~~v~A~n~~G--~~~~s~~~~~ 1322 (2245)
......+++.|.+|.|++.|.|+|+|.+..| .|..|..+..
T Consensus 371 ~~~~~~~~~~l~~L~p~t~Y~~qVRa~~~~g~~~G~wS~WS~~ 413 (419)
T 2gys_A 371 ETLQNAHSMALPALEPSTRYWARVRVRTSRTGYNGIWSEWSEA 413 (419)
T ss_dssp EEEESCSEEECCCCCSSCCCEEEEEEEECCTTCCBCCCCCCCC
T ss_pred cccccccEEEeccCCCCCeEEEEEEEEEcCCCCCCccCCCCCC
Confidence 1112567899999999999999999999874 3555554443
No 320
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.63 E-value=4.1e-15 Score=169.05 Aligned_cols=173 Identities=14% Similarity=0.181 Sum_probs=121.5
Q ss_pred CcceEEeCCCeEEEEEEEeeec--CCceEEEECC--ee---cc--------------CCCeEEEEEc--CcEEEEEEeee
Q psy7042 97 LKDLVVPLGKLLTLQCEATGTP--VPKCRWLRNG--RE---IS--------------SGARYRVETA--GGVFRLHFNEV 153 (2245)
Q Consensus 97 ~~~~~v~~G~~v~L~C~~~g~p--~~~i~W~~~g--~~---l~--------------~~~~~~~~~~--~~~~~L~i~~~ 153 (2245)
|..+.+.+|++|+|.|.+.+.+ .+.|.|+|++ .. +. ..+|+.+..+ .+..+|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (223)
T 1dee_B 7 SGGGVVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSL 86 (223)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECSC
T ss_pred CCCEEEcCCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECCC
Confidence 3467899999999999998765 4789999843 21 10 1347777653 34678999999
Q ss_pred ccCCCeEEEEEEEcCcc----c--ceeEEEEEecC----CCeeecCCCceEEcCCCeEEEEEEEecC-CCc-eEEEee-C
Q psy7042 154 TDVDNGDYTCEAYNSVG----F--AHTSSRVKIGT----PPRIDRMPNALYIPEGDNTKVKIFYAGD-QPM-EVSLTK-N 220 (2245)
Q Consensus 154 ~~~d~G~Y~C~a~n~~g----~--~~~~~~l~V~~----~P~~~~~~~~~~v~~G~~~~l~C~~~g~-p~~-~i~W~~-~ 220 (2245)
+.+|+|.|.|.+.+..| . ....+.|.|.. +|.+...+....+.+|+.++|.|.+.|. |.+ .|+|++ |
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~ 166 (223)
T 1dee_B 87 RAEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGSASAPTLFPLVSCENSNPSSTVAVGCLAQDFLPDSITFSWKYKN 166 (223)
T ss_dssp CGGGCEEEEEEEESSSSTTCCEEEECCCEEEEECSSCCBCCEEEEEECTTCCCSSSEEEEEEEEEEEBSSCCEEEEEETT
T ss_pred CHHHCEEEEEEEeccccCcccceeecCcEEEEEccCCCCCCEEEEecCCcccCCCCcEEEEEEEEEEeCCCeEEEeEccC
Confidence 99999999999998753 1 11245788873 4555433222345789999999999886 766 999999 9
Q ss_pred ceeeecCCceE-EEEeC---CeEEEEEcccCc--cCceeEEEEEEcCCcceEEEE
Q psy7042 221 GRVVQSDDRFK-FTVLD---DYIIIFIKEIRK--EDAGDYTVNLSNSSGSVSGTF 269 (2245)
Q Consensus 221 g~~l~~~~~~~-~~~~~---~~~~L~i~~~~~--~d~G~Y~C~a~n~~g~~~~~~ 269 (2245)
|..+.....+. ....+ ..+.|.|..... +|.|.|+|.|.|..+......
T Consensus 167 g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~~~~~~ 221 (223)
T 1dee_B 167 NSDISSTRGFPSVLRGGKYAATSQVLLPSKDVAQGTNEHVVCKVQHPNGNKEKDV 221 (223)
T ss_dssp SCBCSCEEECCCEEETTEEEEEEEEEEECTTTTSTTCCEEEEEEECTTCCEEEEE
T ss_pred CCccceeEECCccccCCeEEEEEEEEEcHHHhccCCCCEEEEEEEeCCCCCcccc
Confidence 98875300000 00011 123688888776 889999999999988765443
No 321
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.63 E-value=2.2e-15 Score=170.98 Aligned_cols=169 Identities=15% Similarity=0.225 Sum_probs=122.1
Q ss_pred CcceEEeCCCeEEEEEEEeeec--CCceEEEECC--ee---cc--------------CCCeEEEEEc--CcEEEEEEeee
Q psy7042 97 LKDLVVPLGKLLTLQCEATGTP--VPKCRWLRNG--RE---IS--------------SGARYRVETA--GGVFRLHFNEV 153 (2245)
Q Consensus 97 ~~~~~v~~G~~v~L~C~~~g~p--~~~i~W~~~g--~~---l~--------------~~~~~~~~~~--~~~~~L~i~~~ 153 (2245)
|..+.+.+|++|+|.|.+.+.| .+.|.|+|.. .. +. ..+|+.+..+ ++..+|+|.++
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (220)
T 2fbj_H 7 SGGGLVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKV 86 (220)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSC
T ss_pred CCCeEecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCC
Confidence 3457899999999999998765 5789999842 21 10 1357777654 45678999999
Q ss_pred ccCCCeEEEEEEEcCccc---ceeEEEEEecC----CCeeecCCCceEEcCCCeEEEEEEEecC-CC--ceEEEeeCcee
Q psy7042 154 TDVDNGDYTCEAYNSVGF---AHTSSRVKIGT----PPRIDRMPNALYIPEGDNTKVKIFYAGD-QP--MEVSLTKNGRV 223 (2245)
Q Consensus 154 ~~~d~G~Y~C~a~n~~g~---~~~~~~l~V~~----~P~~~~~~~~~~v~~G~~~~l~C~~~g~-p~--~~i~W~~~g~~ 223 (2245)
+.+|+|.|.|.+.+..+. ....+.|.|.. +|.+...+ ...+.+|+.++|.|.+.|. |. +.|+|+++|..
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~-~~~~~~g~~v~L~C~~~g~~P~~~~~v~W~~~~~~ 165 (220)
T 2fbj_H 87 RSEDTALYYCARLHYYGYNAYWGQGTLVTVSAESARNPTIYPLT-LPPALSSDPVIIGCLIHDYFPSGTMNVTWGKSGKD 165 (220)
T ss_dssp CGGGCEEEEEEEEETTTEEEEECCCEEEEECSSCCBCCEEEEEC-CCSSSCCSSEEEEEEEEEEBSCCCEEEEESCCCSS
T ss_pred ChhhCEEEEEEEeccccccceecCCEEEEecCCCCCCCEEEEee-cccccCCCcEEEEEEEEeEECCCcEEEEEecCCEe
Confidence 999999999999987553 22345788874 45655444 3446789999999999886 76 79999999987
Q ss_pred eec-CCceEEEEeCC---eEEEEEcccCccCceeEEEEEEcCCcceE
Q psy7042 224 VQS-DDRFKFTVLDD---YIIIFIKEIRKEDAGDYTVNLSNSSGSVS 266 (2245)
Q Consensus 224 l~~-~~~~~~~~~~~---~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 266 (2245)
+.. .........+. .+.|.|.....+|+|.|+|.|.|..|...
T Consensus 166 ~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~ytC~v~n~~~~~~ 212 (220)
T 2fbj_H 166 ITTVNFPPALASGGRYTMSNQLTLPAVECPEGESVKCSVQHDSNPVQ 212 (220)
T ss_dssp CEEEECCCEECSSSCEEEEEEEEECGGGSCTTCEEEEEEEETTSCCE
T ss_pred cceEecCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCceE
Confidence 521 01111111111 12589999988999999999999988754
No 322
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=99.63 E-value=6.1e-16 Score=193.05 Aligned_cols=215 Identities=17% Similarity=0.156 Sum_probs=154.1
Q ss_pred CCcCEEEEEEEEeCCCCceeE-EEEEeeCCCCCCCCCeeeeecCCcEEEEeeCCCCCCCcccccEEEEeeeCC--CCCeE
Q psy7042 641 NVDTAPYRVVAENDLGMDSAI-VKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHP--MSSWI 717 (2245)
Q Consensus 641 ~~d~g~y~C~a~n~~g~~~~~-~~l~v~~~P~~p~~~~~~~~~~~si~lsW~~p~~~~~~~~~~y~v~~~~~~--~~~w~ 717 (2245)
..+.|.|.|.+.|.+|..... .......+|.+|.++. ..++.+++.|+|.+|...++..+..|.|+++... ...|.
T Consensus 304 s~~~Gs~~C~C~ng~~ra~~d~~~~~ct~pPsaP~nl~-~~vs~tSv~LsW~pP~~~gG~~i~~Y~V~~~~~~~~~~~~~ 382 (536)
T 3fl7_A 304 PSPEGATSCECEEGFFRAPQDPASMPCTRPPSAPHYLT-AVGMGAKVELRWTPPQDSGGREDIVYSVTCEQCWPESGECG 382 (536)
T ss_dssp CCCTTCSSCEECTTCBCCTTCCTTSCCBCCCCCBSCEE-EECCTTSEEEEECCBSCCCSCSCCEEEEEEEEECC-CCCEE
T ss_pred CCCCCccEEEEeccccccCCCccccccccCCCcccceE-EEecCCEEEEEEeCCcCCCCCceeEEEEEEEeccCCCCccc
Confidence 456799999999999966432 2333456899999985 4789999999999887777778999999998632 22332
Q ss_pred EEc----------eeeeeeEEEecCCCCCEEEEEEEEEecccCCCCCCCCccEEecCccccccccccccccCCCceeecc
Q psy7042 718 RVG----------NTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDTFKKQIKKRQYDFDETGKKIRGK 787 (2245)
Q Consensus 718 ~~~----------~~~~~~~~i~~L~p~t~y~~~v~a~n~~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 787 (2245)
... ......++|.+|.|++.|.|+|.|.|..|.+.++..+.
T Consensus 383 ~c~~~~~~~~~~~~~~~ts~tI~gL~P~T~Y~frV~A~N~~G~~sps~~s~----------------------------- 433 (536)
T 3fl7_A 383 PCEASVRYSEPPHGLTRTSVTVSDLEPHMNYTFTVEARNGVSGLVTSRSFR----------------------------- 433 (536)
T ss_dssp ECCTTCEESSCSSSBCSSEEEEECCCTTCEEEEEEEEECTTGGGCSCCCEE-----------------------------
T ss_pred ccCCCceEEEeecCCccceeEeCCCCCCCEEEEEEEEEecCCCCCCCCccc-----------------------------
Confidence 211 22457899999999999999999999888743311100
Q ss_pred cccccccCCceEEEEeeeccCccccccccceecccccccccccCceeEEEEeeecccCCeeEEEeeccCCchhhhhhhee
Q psy7042 788 ADEKVSDYDQYVFDIYSKYVPQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKE 867 (2245)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 867 (2245)
T Consensus 434 -------------------------------------------------------------------------------- 433 (536)
T 3fl7_A 434 -------------------------------------------------------------------------------- 433 (536)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeeeeccCCCceEeecccccCCcceEEEEEEecCCCCCcccEEeeeeCceEEEEecCCCCCCCCccceEEEeeeecCCCc
Q psy7042 868 IDIMNQLHHPKLINLHDAFEDDDEMVLIFEVLDRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTV 947 (2245)
Q Consensus 868 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~p~~l~~~~~~~~~~~l~W~~p~~~~g~~i~~y~i~~~~~~~~~ 947 (2245)
..++...|.+|..+.....+.+++.|+|.+|.+.+| .|.+|.|+|......
T Consensus 434 ---------------------------~v~v~T~~~~Ps~~~~~~~s~tSV~LsW~pP~~~ng-~I~~Y~V~y~~~~~~- 484 (536)
T 3fl7_A 434 ---------------------------TASVSINQTEPPKVRLEGRSTTSLSVSWSIPPPQQS-RVWKYEVTYRKKGDS- 484 (536)
T ss_dssp ---------------------------EEEEECCSCCCCEEEEEECCC-CCEEEEECCTTTTT-TCSEEEEEEEEC--C-
T ss_pred ---------------------------eeEEeecccCCCCCceeeccCCeEEEEEECCcCCCC-cccEEEEEEEECCCC-
Confidence 011123455666666677788999999999976665 899999999976544
Q ss_pred eEEecceeeeceEEEecCCCCceeeEEEEEEeccccCCCccccCcccccC
Q psy7042 948 WTKVSSYVTTPFVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKH 997 (2245)
Q Consensus 948 ~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~s~~~~~~~~~t 997 (2245)
..........++++|.+|.|++.|.|+|+|.|..|.|++| ..+.++|
T Consensus 485 ~~~~~v~~~~ts~~l~gL~P~T~Y~frVrA~n~~G~Gp~S---~~v~~~T 531 (536)
T 3fl7_A 485 NSYNVRRTEGFSVTLDDLAPDTTYLVQVQALTQEGQGAGS---KVHEFQT 531 (536)
T ss_dssp CCCEEEEESSSEEECCSCCSSCEEEEEEEEECC---CEEC---CCEEEEC
T ss_pred ceEEEEcCCCCEEEECCCCCCCEEEEEEEEEcCCcccCCC---CCEEEEe
Confidence 2222234567789999999999999999999999999887 4455554
No 323
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.63 E-value=2.5e-15 Score=170.24 Aligned_cols=173 Identities=13% Similarity=0.188 Sum_probs=126.1
Q ss_pred CCceEEcCCCeEEEEEEecCcC---CCeEEEeeCC--Eec------------cCCceEEEEecCcEEEEEEeeeccCCCe
Q psy7042 1704 LKDLVVPLGKLLTLQCEATGTP---VPKCRWLRNG--REI------------SSGARYRVETAGGVFRLHFNEVTDVDNG 1766 (2245)
Q Consensus 1704 ~~~~~~~~G~~v~L~C~~~~~p---~~~v~W~~~~--~~l------------~~~~~~~~~~~~~~~~L~i~~v~~~d~G 1766 (2245)
+..+.+.+|++++|.|.+.+.| .+.+.|+|++ ..+ ....|+.+...++..+|.|.+++.+|+|
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 86 (212)
T 1q0x_L 7 ESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEA 86 (212)
T ss_dssp CSEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred CCeEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCccCCE
Confidence 5678899999999999998877 4789999863 222 1235677666677788999999999999
Q ss_pred EEEEEEecCceeeE-EEEEEEec----CCCccccCCCceEEcCCCeEEEEEEEeccC-Cc-EEEEEECCEEeecCCceE-
Q psy7042 1767 DYTCEAYNSVGFAH-TSSRVKIG----TPPRIDRMPNALYIPEGDNTKVKIFYAGDQ-PM-EVSLTKNGRVVQSDDRFK- 1838 (2245)
Q Consensus 1767 ~Y~C~~~n~~g~~~-~~~~l~V~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p-~~-~v~W~~~g~~l~~~~~~~- 1838 (2245)
.|.|.+.|..+... ....|.|. .+|.+...+....+..|+.++|.|.+.|.+ ++ .|.|+|+|+.+.......
T Consensus 87 ~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~ 166 (212)
T 1q0x_L 87 IYFCALWSNNKLVFGGGTKLTVLGQPKSSPTVTLFPPSSEELSTAKATLVCTITDFYPGVVTVDWKVDGTPVTAGMETTQ 166 (212)
T ss_dssp EEEEEEECSSCEEECCCEEEEECCSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECC
T ss_pred EEEEEEecCchhhcCCCeEEEEecCCCCCCeeEEeCCCHHHccCCcEEEEEEEEEEeCCCeEEEEEECCEeCCCCeecCC
Confidence 99999999876432 23466663 466665544433445789999999999864 33 899999999886542110
Q ss_pred EEEcCC-----eEEEEEcccCcccceEEEEEEEcCCeeeEEEE
Q psy7042 1839 FTVLDD-----YIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTF 1876 (2245)
Q Consensus 1839 ~~~~~~-----~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 1876 (2245)
.....+ ...|.|..+..+|.|.|+|.|.|.......++
T Consensus 167 ~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~v 209 (212)
T 1q0x_L 167 PSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHSSNKTL 209 (212)
T ss_dssp CEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTEEEEEEE
T ss_pred ceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCcceeeee
Confidence 111111 24688999999999999999999877654443
No 324
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.63 E-value=1.7e-15 Score=172.81 Aligned_cols=167 Identities=13% Similarity=0.145 Sum_probs=118.0
Q ss_pred CcceEEeCCCeEEEEEEEeeec--CCceEEEECC--eecc-----------------CCCeEEEEEc--CcEEEEEEeee
Q psy7042 97 LKDLVVPLGKLLTLQCEATGTP--VPKCRWLRNG--REIS-----------------SGARYRVETA--GGVFRLHFNEV 153 (2245)
Q Consensus 97 ~~~~~v~~G~~v~L~C~~~g~p--~~~i~W~~~g--~~l~-----------------~~~~~~~~~~--~~~~~L~i~~~ 153 (2245)
|..+.+.+|++|+|.|.+.+.| .+.|.|+|++ ..+. ..+|+.+..+ .+..+|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (225)
T 1op3_H 7 SGGGLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKM 86 (225)
T ss_dssp ECCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeEecCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECCC
Confidence 3457899999999999998876 6789999843 2110 1357777654 45678999999
Q ss_pred ccCCCeEEEEEEEcCcc-----c---ceeEEEEEecC----CCeeec-CCCceEEcCCCeEEEEEEEecC-CCc-eEEEe
Q psy7042 154 TDVDNGDYTCEAYNSVG-----F---AHTSSRVKIGT----PPRIDR-MPNALYIPEGDNTKVKIFYAGD-QPM-EVSLT 218 (2245)
Q Consensus 154 ~~~d~G~Y~C~a~n~~g-----~---~~~~~~l~V~~----~P~~~~-~~~~~~v~~G~~~~l~C~~~g~-p~~-~i~W~ 218 (2245)
+.+|+|.|.|.|.|..| . ....+.|.|.. +|.+.. .|.. .+.+|+.++|.|.+.|. |.+ .|.|+
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~-~~~~g~~v~L~C~~~g~~P~p~~v~W~ 165 (225)
T 1op3_H 87 RVEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSS-KSTSGGTAALGCLVKDYFPEPVTVSWN 165 (225)
T ss_dssp CGGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSCBCCEEEEECCCT-TCCCCCEEEEEEEEEEEBSSCCEEECC
T ss_pred ChhhCEEEEEEEecCCCccccccceeecCCEEEecccCCCcCCeEEEecccc-cccCCCcEEEEEEEEeEECCCeEEEEe
Confidence 99999999999999865 2 11345788865 355543 3332 35789999999999885 766 99999
Q ss_pred eCceeeecCCceEEEEe-C---CeEEEEEcccCccCceeEEEEEEcCCcce
Q psy7042 219 KNGRVVQSDDRFKFTVL-D---DYIIIFIKEIRKEDAGDYTVNLSNSSGSV 265 (2245)
Q Consensus 219 ~~g~~l~~~~~~~~~~~-~---~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 265 (2245)
|+|..+.......+... + ....|.|.++..+| |.|+|.|.|..+..
T Consensus 166 ~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~ 215 (225)
T 1op3_H 166 SGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNT 215 (225)
T ss_dssp TTSCCTTCEECCCEECTTSCEEEEEEEEEEGGGTTC-CCCCEEEEEGGGTE
T ss_pred cCCCcCCeEecCceeCCCCCEEEEEEEEEechhcCC-CcEEEEEEcCCCCc
Confidence 99876321000001111 1 12368999998888 99999999976543
No 325
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.62 E-value=2.5e-15 Score=171.53 Aligned_cols=184 Identities=13% Similarity=0.098 Sum_probs=132.4
Q ss_pred CCCceeccCCceEEcCCCeEEEEEEecCcCCCeEEEeeCCEeccCCceEEEEecCcEEEEEEeeeccCCCeEEEEEEecC
Q psy7042 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNS 1775 (2245)
Q Consensus 1696 ~~p~~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~ 1775 (2245)
.+|.+...+.. .+.+|++|+|.|.+.+ +...+.|+|+|..+..... ..........|.|.+++.+|+|.|+|.+.+.
T Consensus 6 ~kP~i~~~P~~-~v~~G~~VtL~C~~~~-~~~~~~w~k~g~~~~~~~~-~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 82 (242)
T 1p6f_A 6 PKPFIWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRP-KPPERINKVKFYIPDMNSRMAGQYSCIYRVG 82 (242)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECC-SSCTTCCEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CCCEEEeeCCC-ccCCCCcEEEEEeeCC-CCcEEEEEECCCccccccc-cccCCcceeEEEecCCCcccCeEEEEEEecC
Confidence 57777777766 8999999999999975 3568999999987641100 0011234556999999999999999999876
Q ss_pred ceee--EEEEEEEecC---CCccccCCCceEEcCCCeEEEEEEEeccCCcEEEEEECCEEeecCCceEEEEcCCeEEEEE
Q psy7042 1776 VGFA--HTSSRVKIGT---PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFI 1850 (2245)
Q Consensus 1776 ~g~~--~~~~~l~V~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~l~i 1850 (2245)
.+.. ...+.|.|.. +|.+...+ ...+.+|++++|.|.+.+. .+.+.|+|+|..+.. ..........|.|
T Consensus 83 ~~~s~~S~~~~L~V~~~~~~P~i~~~p-~~~v~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~----~~~~~~~~~~l~I 156 (242)
T 1p6f_A 83 ELWSEPSNLLDLVVTEMYDTPTLSVHP-GPEVISGEKVTFYCRLDTA-TSMFLLLKEGRSSHV----QRGYGKVQAEFPL 156 (242)
T ss_dssp TEECCCCCCEEEEEECCSCCCEEEEES-CSEEETTCEEEEEEECTTS-CSEEEEEECSSSCEE----EEEECSSEEEEEE
T ss_pred CccccCCcceEEEeecccCCCceEccC-CCccCCCCcEEEEEecCCC-CCEEEEEECCCccCc----cccCCCceEEEEe
Confidence 5433 3346677754 56665444 3568899999999998765 459999999976643 1223456678999
Q ss_pred cccCcccceEEEEEEEcCC---eeeEEEEEEEEeCCCCCCC
Q psy7042 1851 KEIRKEDAGDYTVNLSNSS---GSVSGTFTINITGLPGPPI 1888 (2245)
Q Consensus 1851 ~~~~~~d~G~Y~C~a~n~~---g~~~~~~~l~v~~~p~~~~ 1888 (2245)
.++..+|+|.|+|.+.|.. ...+..+.|.|.+.+..|.
T Consensus 157 ~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~~~~~~P~ 197 (242)
T 1p6f_A 157 GPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVTGDIENTS 197 (242)
T ss_dssp EECCGGGCEEEEEEEEEETTEECCCCCCEEEEEEC------
T ss_pred CCCccccCEEEEEEEECCCCcccCCCCCEEEEEeccCCCCc
Confidence 9999999999999999864 2455668888887666554
No 326
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.62 E-value=2e-15 Score=171.22 Aligned_cols=176 Identities=14% Similarity=0.254 Sum_probs=129.9
Q ss_pred CceeccCCceEEcCCCeEEEEEEecCcCCCeEEEeeCC---Ee--c---------cCCceEEEEecCcEEEEEEeeeccC
Q psy7042 1698 PDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNG---RE--I---------SSGARYRVETAGGVFRLHFNEVTDV 1763 (2245)
Q Consensus 1698 p~~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~~---~~--l---------~~~~~~~~~~~~~~~~L~i~~v~~~ 1763 (2245)
|.+...+..+.+.+|++++|.|.+.+.|.+.+.|+|.+ .. + ....|+.+...++..+|.|.+++.+
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 81 (213)
T 3r06_A 2 IQMTQSPSSLPASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLESE 81 (213)
T ss_dssp CCEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred CeeEeCCCEEEecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCcc
Confidence 34555667789999999999999999988999999832 11 0 1245777776777889999999999
Q ss_pred CCeEEEEEEecCceee-EEEEEEEe---cCCCccccCCCceEEcCCCeEEEEEEEeccCC--cEEEEEECCEEeecCC--
Q psy7042 1764 DNGDYTCEAYNSVGFA-HTSSRVKI---GTPPRIDRMPNALYIPEGDNTKVKIFYAGDQP--MEVSLTKNGRVVQSDD-- 1835 (2245)
Q Consensus 1764 d~G~Y~C~~~n~~g~~-~~~~~l~V---~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~--~~v~W~~~g~~l~~~~-- 1835 (2245)
|+|.|+|.+.|..+.. .....|.| ..+|.+...+....+..|+.+.|.|.+.|.++ +.+.|+|+|..+....
T Consensus 82 D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~ 161 (213)
T 3r06_A 82 DIGSYYCQQYYNYPWTFGPGTKLEIKRADAKPTVSIFPPSSEQLGTGSATLVCFVNNFYPKDINVKWKVDGSEKRDGVLQ 161 (213)
T ss_dssp GCSEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEE
T ss_pred cCEEEEEecccCCceEEcCCceEEEeccCCCceeeeeCCCceecCCCCcEEEEEEeeecCCceEEEEEECCcccCCceEe
Confidence 9999999999875432 23456777 56777766555555667889999999998654 4899999999886531
Q ss_pred ceEEEEcCC-----eEEEEEcccCcccceEEEEEEEcCCeeeE
Q psy7042 1836 RFKFTVLDD-----YIIIFIKEIRKEDAGDYTVNLSNSSGSVS 1873 (2245)
Q Consensus 1836 ~~~~~~~~~-----~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~ 1873 (2245)
........+ ...|.|.....+|.|.|+|.|.|......
T Consensus 162 ~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~v~n~~~~~~ 204 (213)
T 3r06_A 162 SVTDQDSKDSTYSLSSTLSLTKADYERHNLYTCEVTHKTSTAA 204 (213)
T ss_dssp EECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSC
T ss_pred ccCceeCCCCcEEEEEEEEeCHHHhccCCeEEEEEEecccCcc
Confidence 110111111 13678888888899999999999865433
No 327
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.62 E-value=5.5e-15 Score=172.08 Aligned_cols=177 Identities=18% Similarity=0.276 Sum_probs=130.4
Q ss_pred CceEEcCCCeEEEEEEecCcC--CCeEEEeeCC--Eec-----------------cCCceEEEEe--cCcEEEEEEeeec
Q psy7042 1705 KDLVVPLGKLLTLQCEATGTP--VPKCRWLRNG--REI-----------------SSGARYRVET--AGGVFRLHFNEVT 1761 (2245)
Q Consensus 1705 ~~~~~~~G~~v~L~C~~~~~p--~~~v~W~~~~--~~l-----------------~~~~~~~~~~--~~~~~~L~i~~v~ 1761 (2245)
..+.+.+|++++|.|.+.+.| .+.+.|+|+. ..+ ....|+.+.. .++..+|+|.+++
T Consensus 10 ~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 89 (247)
T 2ghw_B 10 GGGVVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLR 89 (247)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCEEEecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcCC
Confidence 458899999999999999876 5789999842 111 1234666655 3567889999999
Q ss_pred cCCCeEEEEEEecCcee--eEEEEEEEecCC---------------CccccCCCceEEcCCCeEEEEEEEeccCCcEEEE
Q psy7042 1762 DVDNGDYTCEAYNSVGF--AHTSSRVKIGTP---------------PRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSL 1824 (2245)
Q Consensus 1762 ~~d~G~Y~C~~~n~~g~--~~~~~~l~V~~~---------------p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~v~W 1824 (2245)
.+|+|.|+|.+.|..+. ......|.|..+ +.+...+..+.+.+|++++|.|.+.+.|.+.+.|
T Consensus 90 ~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W 169 (247)
T 2ghw_B 90 AEDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERATLSCRASQSVRSNLAW 169 (247)
T ss_dssp GGGCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEECTTSCEEEEEEESSCCTTCEEE
T ss_pred HHHCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCCcEEEEEEeCCCccceEEE
Confidence 99999999999987332 223457777654 3345556677899999999999999999899999
Q ss_pred EE--CCEEee------------cCCceEEEEcCCeEEEEEcccCcccceEEEEEEEcCCeee-EEEEEEEEe
Q psy7042 1825 TK--NGRVVQ------------SDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV-SGTFTINIT 1881 (2245)
Q Consensus 1825 ~~--~g~~l~------------~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~v~ 1881 (2245)
+| +|..+. ...++.+........|.|.++..+|+|.|+|.|.|..+.. .....|.|.
T Consensus 170 ~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~g~~t~l~V~ 241 (247)
T 2ghw_B 170 YQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQRSNWPPTFGQGTKVEVK 241 (247)
T ss_dssp EEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred EEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEEEEEEccCCCceEcCCEEEEEC
Confidence 99 555331 1345555444566789999999999999999999864322 223455554
No 328
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.62 E-value=1.1e-15 Score=173.11 Aligned_cols=176 Identities=14% Similarity=0.178 Sum_probs=117.3
Q ss_pred CCcceEEeCCCeEEEEEEEeee--cCCceEEEECC--ee---c-------------cCCCeEEEEEcCcEEEEEEeeecc
Q psy7042 96 PLKDLVVPLGKLLTLQCEATGT--PVPKCRWLRNG--RE---I-------------SSGARYRVETAGGVFRLHFNEVTD 155 (2245)
Q Consensus 96 ~~~~~~v~~G~~v~L~C~~~g~--p~~~i~W~~~g--~~---l-------------~~~~~~~~~~~~~~~~L~i~~~~~ 155 (2245)
.|..+.+.+|++|+|.|.+.+. +.+.|.|+|.. .. + ....|+.+...++..+|.|.+++.
T Consensus 5 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 84 (215)
T 3nl4_H 5 ESGGRLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSPTT 84 (215)
T ss_dssp EECCCEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSCCG
T ss_pred cCCCEEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCCCc
Confidence 4456789999999999999863 36789999832 11 1 123577777777888999999999
Q ss_pred CCCeEEEEEEEcCccc----ceeEEEEEec----CCCeeecCCCceEEcCCCeEEEEEEEecCCC--ceEEEeeCceeee
Q psy7042 156 VDNGDYTCEAYNSVGF----AHTSSRVKIG----TPPRIDRMPNALYIPEGDNTKVKIFYAGDQP--MEVSLTKNGRVVQ 225 (2245)
Q Consensus 156 ~d~G~Y~C~a~n~~g~----~~~~~~l~V~----~~P~~~~~~~~~~v~~G~~~~l~C~~~g~p~--~~i~W~~~g~~l~ 225 (2245)
+|+|.|.|.|.|..+. ....+.|.|. .+|.+...+....+.+|+.++|.|.+.|.|+ ..+.|+|+|..+.
T Consensus 85 ~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~~~ 164 (215)
T 3nl4_H 85 EDTATYFCVRKYGSEWGGDLWGPGTLVTVSSGQPKAPSVFPLAPCCGDTPSSTVTLGCLVKGYLPEPVTVTWNSGTLTNG 164 (215)
T ss_dssp GGCEEEEEEEECSSSSCEEEECCCEEEEECSSCCBCCEEEEECCCTTCCC--CEEEEEEEEEEBSSCCEEEEGGGTBCTT
T ss_pred ccCEEEEEEEecCCCccceEEcCCEEEEEeCCCcCCCEEEEecCCccccCCCcEEEEEEEeeeeCCCeEEEEeeCCEECC
Confidence 9999999999988653 2334567886 4666664444445678999999999988543 4577999997543
Q ss_pred cCCceEEEEeCCe-EEEEEcccCccCceeEEEEEEcCCcceEEEEEEE
Q psy7042 226 SDDRFKFTVLDDY-IIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTIN 272 (2245)
Q Consensus 226 ~~~~~~~~~~~~~-~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 272 (2245)
..........++. .......+...| |.|+|.|.|..+.....+.|.
T Consensus 165 ~~~~~~~~~~~g~~~~~s~l~v~~~d-g~ytC~v~~~~~~~~~~~~l~ 211 (215)
T 3nl4_H 165 VRTFPSVRQSSGLYSLSSVVSVTSSS-QPVTCNVAHPATNTKVDKTVA 211 (215)
T ss_dssp EEECCCEECTTSCEEEEEEEEECC----CCEEEEEEGGGTEEEEEECC
T ss_pred eEecCceECCCCCEEEEEEEEEeccC-CEEEEEEEeCCCCcceEEecC
Confidence 2111111111121 111224455667 999999999998776666554
No 329
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.62 E-value=2.1e-15 Score=172.43 Aligned_cols=173 Identities=12% Similarity=0.170 Sum_probs=119.8
Q ss_pred CcceEEeCCCeEEEEEEEeeecC----CceEEEEC--Ceecc----------------CCCeEEEEEc--CcEEEEEEee
Q psy7042 97 LKDLVVPLGKLLTLQCEATGTPV----PKCRWLRN--GREIS----------------SGARYRVETA--GGVFRLHFNE 152 (2245)
Q Consensus 97 ~~~~~v~~G~~v~L~C~~~g~p~----~~i~W~~~--g~~l~----------------~~~~~~~~~~--~~~~~L~i~~ 152 (2245)
|..+.+.+|++++|.|.+.+.|. +.|.|+|+ |..+. ..+|+.+..+ .+...|.|.+
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 86 (228)
T 3bae_H 7 SGPGLLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKITS 86 (228)
T ss_dssp ECCSEECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEECS
T ss_pred CCceeecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEcC
Confidence 45578999999999999998774 78999984 32210 1347777653 3457899999
Q ss_pred eccCCCeEEEEEEEcCcc------c---ceeEEEEEecC----CCeeecCCCceEEcCCCeEEEEEEEecC-CCc-eEEE
Q psy7042 153 VTDVDNGDYTCEAYNSVG------F---AHTSSRVKIGT----PPRIDRMPNALYIPEGDNTKVKIFYAGD-QPM-EVSL 217 (2245)
Q Consensus 153 ~~~~d~G~Y~C~a~n~~g------~---~~~~~~l~V~~----~P~~~~~~~~~~v~~G~~~~l~C~~~g~-p~~-~i~W 217 (2245)
++.+|+|.|.|.|.|..| . ....+.|.|.. +|.+...+....+.+|+.++|.|.+.|. |.+ .|.|
T Consensus 87 v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~~~l~C~~~g~~P~p~~v~W 166 (228)
T 3bae_H 87 VDTADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTW 166 (228)
T ss_dssp CCGGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCCCBCCEEEEECC-----CCSEEEEEEEEEEEBSSCCEEEE
T ss_pred CCcccCEEEEEEEecCCCccccccceeeeCCcEEEEecCCCCCCCEEEEecccccccCCCCEEEEEEEccEeCCCEEEEE
Confidence 999999999999998765 1 11246788873 5666544434456889999999999885 877 9999
Q ss_pred eeCceeeecCCceEEEEeC---CeEEEEEcccCccCceeEEEEEEcCCcceEEEEE
Q psy7042 218 TKNGRVVQSDDRFKFTVLD---DYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFT 270 (2245)
Q Consensus 218 ~~~g~~l~~~~~~~~~~~~---~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 270 (2245)
+++|..+.......+...+ ....|.|.++..+| |.|+|.|.|..|.......
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~-g~YtC~~~n~~~~~~~~~~ 221 (228)
T 3bae_H 167 NSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-ESITCNVAHPASSTKVDKK 221 (228)
T ss_dssp GGGTCCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEEE
T ss_pred eeCCcccCceEcCceeCCCcEEEEEEEEEEhhhcCC-CcEEEEEEECCCCCCEEEE
Confidence 9998764211110111111 13468999988866 9999999999887654433
No 330
>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C*
Probab=99.62 E-value=1.7e-14 Score=173.89 Aligned_cols=268 Identities=16% Similarity=0.148 Sum_probs=167.3
Q ss_pred CCCCCcccEEeeeeCceEEEEecCCCCCCCCccceEEEeeeecCCCceEEecceeeeceEEEecCCCCceeeEEEEEEe-
Q psy7042 901 RPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFVRVRNLAIGSTYEFRVMAEN- 979 (2245)
Q Consensus 901 ~P~~p~~l~~~~~~~~~~~l~W~~p~~~~g~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~n- 979 (2245)
...||.+|++......++.|+|++|....+..+.+|.+.+... |... .....+.+.+|.+++.|.++|+|.+
T Consensus 3 ~~~pP~nl~~~~~~~~~v~l~W~pP~~~~~~~~~~Y~v~~~~~----~~~~---~~~~~~~~~~~~~~~~y~~~V~a~~~ 75 (314)
T 3bpo_C 3 TQPPVTNLSVSVENLCTVIWTWNPPEGASSNCSLWYFSHFGDK----QDKK---IAPETRRSIEVPLNERICLQVGSQCS 75 (314)
T ss_dssp -CCCCEEEEEEEETTTEEEEEEECCSSCCCSSCCCEEECCC------CCCE---EESSSEEEEECCCSSCEEEEEEECC-
T ss_pred cCCCCcceEEEeCCceEEEEEEcCCCCCCCCceEEEEEEeccc----CceE---eccccEEEEEEcCCCcEEEEEEEEec
Confidence 3478999999988899999999998655233677899987542 2111 1233456788999999999999954
Q ss_pred ccccCCCccccCcccccCCCCCC-CCCCCCeeEeecCCeEEEEecCCCCCCCCccceEEEEEEecCCccceeccccccCC
Q psy7042 980 QYGLSKPALTIDPIKAKHPFDVP-GAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPD 1058 (2245)
Q Consensus 980 ~~g~~~~s~~~~~~~~~t~~~~p-~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~ 1058 (2245)
..|.+..+.... ..+.++...| .+|.++.....+.+++.++|++|... + .+.+|.|.|+..+...+..|.......
T Consensus 76 ~~~~g~~s~~~~-~~~~~~~~~pp~~P~~l~c~~~~~~~~~c~W~~~~~~-~-~~~~Y~l~y~~~~~~~~~~C~~~~~~~ 152 (314)
T 3bpo_C 76 TNESEKPSILVE-KCISPPEGDPESAVTELQCIWHNLSYMKCSWLPGRNT-S-PDTNYTLYYWHRSLEKIHQCENIFREG 152 (314)
T ss_dssp --------CCEE-EEECCCCC-CCSSCEEEEEEEETTTEEEEEEECCC-----CCCCEEEEEEESSCSSCEECCCEEEET
T ss_pred CCCCCCCCcCee-eeeecCCCCCCCCCEeceEEECCCCeEEEEECCCCCC-C-CCccEEEEEEeCCCCccccCcCeecCC
Confidence 566665543222 1122344444 48889988888889999999998755 2 378999998876555565663211100
Q ss_pred cceeEEEEeecccccCCccCchhhhhhhhhccccccccccc----CCcEEEEEEEEEecCCCCCCCCCCcceeecCCCCC
Q psy7042 1059 TSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLI----ENHEYEFRVCAVNAAGQGPWSSSSDIIMCCAPPCA 1134 (2245)
Q Consensus 1059 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~----~~~~Y~~~v~A~n~~G~~~~s~~~~~~~~~~~p~~ 1134 (2245)
.. ..|.+..+. ..+.|.|+|.|.|..|.+..+. ..+
T Consensus 153 ~~------------------------------~~c~~~~~~~~~~~~~~y~~~V~a~n~~G~~~~~~----~~~------ 192 (314)
T 3bpo_C 153 QY------------------------------FGCSFDLTKVKDSSFEQHSVQIMVKDNAGKIKPSF----NIV------ 192 (314)
T ss_dssp TE------------------------------EEEEEECCC--------CCEEEEEEETTSCSCCEE----EEE------
T ss_pred Ce------------------------------EEEEECCCCccccceeEEEEEEEEEcCCCceeccc----EEE------
Confidence 00 012344444 4778999999999987653110 000
Q ss_pred CccccCCCceeEEEEcCCeEEEEEEeeecCCCcceEEeCCeecCCCCcEEEEEccceEEEEecCccccccceeEEEEEEc
Q psy7042 1135 PKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQLVN 1214 (2245)
Q Consensus 1135 p~~~~~~~~~~~~v~~~~~~~l~~~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~a~n 1214 (2245)
. ...
T Consensus 193 ------------------------~------------------------------------~~~---------------- 196 (314)
T 3bpo_C 193 ------------------------P------------------------------------LTS---------------- 196 (314)
T ss_dssp ------------------------C------------------------------------SSS----------------
T ss_pred ------------------------e------------------------------------hhh----------------
Confidence 0 000
Q ss_pred CCcceeEEEEEEEECCCCCCCCCceeeeccCCcEEEEecCCCCCCCcceeeeEEEEeeccccceEEccc-----------
Q psy7042 1215 TVGSDSASCKVYVVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSS----------- 1283 (2245)
Q Consensus 1215 ~~g~~~~s~~~~v~~~p~~p~~~~~~~~~~~~s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~~~~~~~~----------- 1283 (2245)
...|.|| .++.+. ...+++.|+|++|...++. +.+|.|+|+......|.....
T Consensus 197 -------------~v~P~pP-~~l~~~-~~~~~l~lsW~~P~~~~~~-~l~Yev~y~~~~~~~w~~~~~~~~~c~~~~~~ 260 (314)
T 3bpo_C 197 -------------RVKPDPP-HIKNLS-FHNDDLYVQWENPQNFISR-CLFYEVEVNNSQTETHNVFYVQEAKCENPEFE 260 (314)
T ss_dssp -------------SEECCCC-EEEEEE-EETTEEEEEEECCTTCCGG-GEEEEEEEEC--CCCEEEEEESCCCCCCTTSS
T ss_pred -------------eEeeCCC-CEEEEE-EcCCcEEEEEeCCCccCCc-eEEEEEEEEECCCCcceEEecccccccccccc
Confidence 0124443 346665 5667899999998753333 689999999887777764321
Q ss_pred --ceecceEEecCCCCCceEEEEEEEecc
Q psy7042 1284 --FVRSPAYDVFGLETNRQYRFRVRAENQ 1310 (2245)
Q Consensus 1284 --~~~~~~~~l~~L~~~t~Y~~~v~A~n~ 1310 (2245)
....+.+.|.+|.+++.|.|+|+|.+.
T Consensus 261 ~~~~~~~~~~l~~L~p~t~Y~~qVra~~~ 289 (314)
T 3bpo_C 261 RNVENTSCFMVPGVLPDTLNTVRIRVKTN 289 (314)
T ss_dssp CCCSSEEEEEEESCCTTSCEEEEEEEEEC
T ss_pred cccCCceEEEEccCCCCCEEEEEEEeeec
Confidence 134668999999999999999999986
No 331
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.61 E-value=1.6e-15 Score=164.34 Aligned_cols=154 Identities=15% Similarity=0.166 Sum_probs=111.8
Q ss_pred cceEEeCCCeEEEEEEEee-ecCCceEEEEC-Ceecc------------CC--CeEEEEEcCcEEEEEEeeeccCCCeEE
Q psy7042 98 KDLVVPLGKLLTLQCEATG-TPVPKCRWLRN-GREIS------------SG--ARYRVETAGGVFRLHFNEVTDVDNGDY 161 (2245)
Q Consensus 98 ~~~~v~~G~~v~L~C~~~g-~p~~~i~W~~~-g~~l~------------~~--~~~~~~~~~~~~~L~i~~~~~~d~G~Y 161 (2245)
..+.+.+|++|+|.|.+.+ .+.+.|.|+|+ +..+. .. +|+.+...++ +|.|.+++.+|+|.|
T Consensus 7 ~~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~~~~--sL~I~~v~~~D~G~Y 84 (180)
T 2dru_A 7 PNVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKTNG--ALRIYNVSKEDRGDY 84 (180)
T ss_dssp CEEEEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECTTTC--CEEECSCCGGGCEEE
T ss_pred ceEEEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeCCCc--cEEEcCCCHHHCeEE
Confidence 4578899999999999854 34678999994 32221 11 4666632333 599999999999999
Q ss_pred EEEEEcCcccceeEEEEEecCCCeeecCCCceEEcCCCeEEEEEEE-ecCCCceEEEeeCceeeecCCceEEEEeCCeEE
Q psy7042 162 TCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFY-AGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYII 240 (2245)
Q Consensus 162 ~C~a~n~~g~~~~~~~l~V~~~P~~~~~~~~~~v~~G~~~~l~C~~-~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~ 240 (2245)
+|.+.+.. .....+.|.|..++. .+.....+..++|.|.+ .| |.|.|+|+|+|..+.. . ...+
T Consensus 85 ~C~v~~~~-~~~~~~~L~V~~~~~-----~P~i~~~~~~v~L~C~~~~g-p~p~i~W~~~~~~l~~-------~--~~~~ 148 (180)
T 2dru_A 85 YMRMLHET-EDQWKITMEVYEMVS-----KPMIYWECSNATLTCEVLEG-TDVELKLYQGKEHLRS-------L--RQKT 148 (180)
T ss_dssp EEEEESSS-EEEEEEEEEEECCCC-----CCEEEEEGGGTEEEEECSSC-TTCEEEEEETTEEEEE-------E--SSSE
T ss_pred EEEEEcCC-eEEEEEEEEEECCCC-----CCEEEecCCCEEEEEEeCCC-CCCEEEEEECCeECcC-------C--CCCE
Confidence 99998876 556677888876532 11112245679999999 56 9999999999998851 1 1224
Q ss_pred EEEcccCccCceeEEEEEEcCCcceEEEEEE
Q psy7042 241 IFIKEIRKEDAGDYTVNLSNSSGSVSGTFTI 271 (2245)
Q Consensus 241 L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 271 (2245)
|.+.. .+|+|.|+|.|.|..+...+.+.+
T Consensus 149 l~~~~--~~d~g~Y~C~a~N~~~~~~~~~~i 177 (180)
T 2dru_A 149 MSYQW--TNLRAPFKCKAVNRVSQESEMEVV 177 (180)
T ss_dssp EEEEC--SCCSSCEEEEEEETTEEEEEEECC
T ss_pred EEEEE--hhcCccEEEEEecCcCccccceeE
Confidence 55533 789999999999999887666544
No 332
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=99.61 E-value=1.1e-14 Score=160.23 Aligned_cols=172 Identities=22% Similarity=0.317 Sum_probs=130.3
Q ss_pred ecCCCCCcccEEeeeeCceEEEEecCCCCCCCCccceEEEeeeecCCCceEEecceeeeceEEEecCCCCceeeEEEEEE
Q psy7042 899 LDRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFVRVRNLAIGSTYEFRVMAE 978 (2245)
Q Consensus 899 ~~~P~~p~~l~~~~~~~~~~~l~W~~p~~~~g~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~ 978 (2245)
...|.+|.+|.+...+++++.|+|.+|. + .+.+|.|++... .+.+...........+.+.+|.|++.|.|+|+|.
T Consensus 4 ~t~p~~P~~l~~~~~~~~sv~l~W~~p~---~-~i~~Y~v~~~~~-~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~ 78 (186)
T 1qr4_A 4 GTDLDNPKDLEVSDPTETTLSLRWRRPV---A-KFDRYRLTYVSP-SGKKNEMEIPVDSTSFILRGLDAGTEYTISLVAE 78 (186)
T ss_dssp ----CCCEEEEEESCCSSEEEEEEECCS---S-CCSEEEEEEECT-TCCEEEEEECTTCSEEEEESCCSSCEEEEEEEEE
T ss_pred cCCCcCCCceEEEecCCCEEEEEEeCCC---C-CccEEEEEEEeC-CCCeeEEECCCCCCEEEECCCCCCCEEEEEEEEE
Confidence 3589999999999999999999999984 2 788999999854 3445555555567889999999999999999999
Q ss_pred eccccCCCccccCcccccCCCCCCCCCCCCeeEeecCCeEEEEecCCCCCCCCccceEEEEEEecCCccceeccccccCC
Q psy7042 979 NQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPD 1058 (2245)
Q Consensus 979 n~~g~~~~s~~~~~~~~~t~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~ 1058 (2245)
|..|.+.+. .+...+ .|.+|.++++...+.+++.|+|.+|. +++.+|.|.|+..+...+.......
T Consensus 79 ~~~~~s~~~----~~~~~t---~p~~P~~l~~~~~~~~sv~l~W~~p~----~~i~~Y~v~~~~~~~~~~~~~~~~~--- 144 (186)
T 1qr4_A 79 KGRHKSKPT----TIKGST---VVGSPKGISFSDITENSATVSWTPPR----SRVDSYRVSYVPITGGTPNVVTVDG--- 144 (186)
T ss_dssp SSSCBCCCE----EEEEEC---CCCCCSCEEEESCCSSCEEEEECCCS----SCCSEEEEEEEETTCCCCEEEEEET---
T ss_pred cCCccCCCE----EEEEEC---CCCCCCccEEEEeCCCEEEEEEECCC----CcccEEEEEEEeCCCCCceEEEcCC---
Confidence 987766542 233333 37788899999999999999999886 3489999999876643332221111
Q ss_pred cceeEEEEeecccccCCccCchhhhhhhhhcccccccccccCCcEEEEEEEEEecCCCCCC
Q psy7042 1059 TSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPW 1119 (2245)
Q Consensus 1059 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~v~A~n~~G~~~~ 1119 (2245)
... .++|.+|.|++.|.|+|+|.|..|.+.+
T Consensus 145 ~~~------------------------------~~~i~~L~p~t~Y~~~V~A~~~~g~s~p 175 (186)
T 1qr4_A 145 SKT------------------------------RTKLVKLVPGVDYNVNIISVKGFEESEP 175 (186)
T ss_dssp TCC------------------------------EEEECSCCSSCEEEEEEEEEETTEECCC
T ss_pred CcC------------------------------EEEEcCCCCCCEEEEEEEEEcCCCcCcC
Confidence 111 1269999999999999999999887653
No 333
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.61 E-value=2.4e-15 Score=173.46 Aligned_cols=175 Identities=18% Similarity=0.267 Sum_probs=129.1
Q ss_pred cCCceEEcCCCeEEEEEEecCcCC-CeEEEeeCCEecc---------C----CceEE----------EEecCcEEEEEEe
Q psy7042 1703 PLKDLVVPLGKLLTLQCEATGTPV-PKCRWLRNGREIS---------S----GARYR----------VETAGGVFRLHFN 1758 (2245)
Q Consensus 1703 ~~~~~~~~~G~~v~L~C~~~~~p~-~~v~W~~~~~~l~---------~----~~~~~----------~~~~~~~~~L~i~ 1758 (2245)
.+..+.+.+|+++.|.|.+.+.+. +.+.|++++.... . ..++. +..+ +. |.|.
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~-~~--L~i~ 82 (231)
T 2pet_A 6 VPPLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQ-GR--LVLA 82 (231)
T ss_dssp CCSEEEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTT-CC--EEES
T ss_pred CCCcEEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCC-ce--EEEc
Confidence 345688999999999999999885 8999998654321 1 11222 2222 22 9999
Q ss_pred eeccCCCeEEEEEEecCc-eeeEEEEEEEecCCC---ccccCCCceEEcCCCeE-EEEEEE-eccCCcEEEEEECCEEee
Q psy7042 1759 EVTDVDNGDYTCEAYNSV-GFAHTSSRVKIGTPP---RIDRMPNALYIPEGDNT-KVKIFY-AGDQPMEVSLTKNGRVVQ 1832 (2245)
Q Consensus 1759 ~v~~~d~G~Y~C~~~n~~-g~~~~~~~l~V~~~p---~~~~~~~~~~~~~g~~~-~l~C~~-~~~p~~~v~W~~~g~~l~ 1832 (2245)
+++.+|+|.|+|.+.+.. +.....+.|.|..+| .+...+....+.+|+.+ .|.|.+ .|.|.+.+.|+++|..+.
T Consensus 83 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~~~~~~~ 162 (231)
T 2pet_A 83 EAQVGDERDYVCVVRAGAAGTAEATARLNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYRNGQRLE 162 (231)
T ss_dssp SCCGGGCEEEEEEEECGGGCEEEEEEEEEEEBCCCCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSCCEEEEEETTEECC
T ss_pred ccCcccCceEEEEEEecCCCceEEEEEEEEEecCCCcEEecCCcceeecCCCceEEEEEEeECcccCCEEEEEECCccCc
Confidence 999999999999999987 778888899998774 44555666677789988 999999 889999999999999986
Q ss_pred cCC----ceEEEEc----CC-----eEEEEEcccCcccceEEEEEEEc-----CCee-eEEEEEEEE
Q psy7042 1833 SDD----RFKFTVL----DD-----YIIIFIKEIRKEDAGDYTVNLSN-----SSGS-VSGTFTINI 1880 (2245)
Q Consensus 1833 ~~~----~~~~~~~----~~-----~~~l~i~~~~~~d~G~Y~C~a~n-----~~g~-~~~~~~l~v 1880 (2245)
... ++.+... .. ...|.|.....+|.|.|+|.|.| ..|. .+..+.|.|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~~~~~~~~~~~s~~~~l~V 229 (231)
T 2pet_A 163 VPVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYSLPEGRHGRLDSPTFHLTL 229 (231)
T ss_dssp CCSSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEECGGGCEEEEECCCEECCC
T ss_pred cccccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcCCcccccccccccceEEEE
Confidence 654 3333221 11 15688876566669999999999 4555 444555544
No 334
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.61 E-value=8.1e-15 Score=167.54 Aligned_cols=179 Identities=15% Similarity=0.194 Sum_probs=119.2
Q ss_pred CcceEEeCCCeEEEEEEEeeec--CCceEEEECC--ee---c-------------cCCCeEEEEEc--CcEEEEEEeeec
Q psy7042 97 LKDLVVPLGKLLTLQCEATGTP--VPKCRWLRNG--RE---I-------------SSGARYRVETA--GGVFRLHFNEVT 154 (2245)
Q Consensus 97 ~~~~~v~~G~~v~L~C~~~g~p--~~~i~W~~~g--~~---l-------------~~~~~~~~~~~--~~~~~L~i~~~~ 154 (2245)
|..+.+.+|++++|.|.+.+.+ .+.|.|+|.. .. + ...+|+.+..+ ++..+|.|.+++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 86 (232)
T 1dn0_B 7 WGAGLLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVT 86 (232)
T ss_dssp ECCCEECTTSCEEEEEEEESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCCEEEeCCCcEEEEEEEccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEECCCC
Confidence 4456889999999999998765 5789999842 21 1 01357777653 456789999999
Q ss_pred cCCCeEEEEEEEcCc--cc----ceeEEEEEecC----CCeeecCCCceEEcCC-CeEEEEEEEecC-CCc-eEEEee-C
Q psy7042 155 DVDNGDYTCEAYNSV--GF----AHTSSRVKIGT----PPRIDRMPNALYIPEG-DNTKVKIFYAGD-QPM-EVSLTK-N 220 (2245)
Q Consensus 155 ~~d~G~Y~C~a~n~~--g~----~~~~~~l~V~~----~P~~~~~~~~~~v~~G-~~~~l~C~~~g~-p~~-~i~W~~-~ 220 (2245)
.+|+|.|.|.+.+.. +. ....+.|.|.. +|.+........+.+| +.++|.|.+.|. |.+ .|+|++ |
T Consensus 87 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~~~~g~~~v~L~C~~~g~~P~p~~v~W~~~~ 166 (232)
T 1dn0_B 87 AADTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGSASAPTLFPLVSCENSPSDTSSVAVGCLAQDFLPDSITFSWKYKN 166 (232)
T ss_dssp GGGCEEEEEEECSSTTSCSCCSEECCCEEEEECSSCCBCCEEEEEECC------CCSEEEEEEEEEEBSSCCEEEEEETT
T ss_pred cccCEEEEEEEecCCcCCchhhhcccceEEEEccCCCCCCceEEeccccccCCCCCcEEEEEEEEEEeCCCeEEEEEcCC
Confidence 999999999998422 21 12345788875 3555432222234578 999999999875 776 999999 9
Q ss_pred ceeeecCCce-EEEEeC---CeEEEEEcccCc--cCceeEEEEEEcCCcceEEEEEEEEec
Q psy7042 221 GRVVQSDDRF-KFTVLD---DYIIIFIKEIRK--EDAGDYTVNLSNSSGSVSGTFTINITG 275 (2245)
Q Consensus 221 g~~l~~~~~~-~~~~~~---~~~~L~i~~~~~--~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 275 (2245)
|..+.....+ .....+ ..+.|.|..... +|.|.|+|.|.|..+.......+.|..
T Consensus 167 g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~ytC~v~n~~~~~~~~~~i~~~~ 227 (232)
T 1dn0_B 167 NSDISSTRGFPSVLRGGKYAATSQVLLPSKDVMAGTDEHVVCKVQHPNGNKEKNVPLPVIA 227 (232)
T ss_dssp SCEECCEEECCCEEETTEEEEEEEEEECTTCC---CCCEEEEEEECTTCCEEEEEECCC--
T ss_pred CCceeeEEECCccccCCcEEEEEEEEEcHHHhcccCCCeEEEEEEeCCCCcceeEecCCCC
Confidence 9887540000 000111 124688988887 899999999999998876666665543
No 335
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.61 E-value=6.2e-15 Score=170.14 Aligned_cols=181 Identities=12% Similarity=0.191 Sum_probs=126.4
Q ss_pred CceecCCcceEEeCCCeEEEEEEEeee--cCCceEEEECC--eec---c--------------CCCeEEEEEcC--cEEE
Q psy7042 91 PDFIVPLKDLVVPLGKLLTLQCEATGT--PVPKCRWLRNG--REI---S--------------SGARYRVETAG--GVFR 147 (2245)
Q Consensus 91 P~~~~~~~~~~v~~G~~v~L~C~~~g~--p~~~i~W~~~g--~~l---~--------------~~~~~~~~~~~--~~~~ 147 (2245)
+.++..|..+.+.+|++++|.|.+.+. +.+.|.|+|+. ..+ . ..+|+.+..+. +..+
T Consensus 2 ~~v~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~ 81 (242)
T 1hxm_B 2 GHLEQPQISSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTST 81 (242)
T ss_dssp CEEECCCSEEEEETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEE
T ss_pred CccCcCCceEEecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEE
Confidence 456677888999999999999999875 66789999842 211 0 24577776543 4678
Q ss_pred EEEeeeccCCCeEEEEEEEcCcc-c------ceeEEEEEecC-------CCeeecC-CCceEEcCCCeEEEEEEEecC-C
Q psy7042 148 LHFNEVTDVDNGDYTCEAYNSVG-F------AHTSSRVKIGT-------PPRIDRM-PNALYIPEGDNTKVKIFYAGD-Q 211 (2245)
Q Consensus 148 L~i~~~~~~d~G~Y~C~a~n~~g-~------~~~~~~l~V~~-------~P~~~~~-~~~~~v~~G~~~~l~C~~~g~-p 211 (2245)
|.|.+++.+|+|.|.|.+.+... . ....+.|.|.. +|.+... |....+.+|+.++|.|.+.|. |
T Consensus 82 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~p~~~v~~p~~~~~~~g~~v~L~C~~~g~~P 161 (242)
T 1hxm_B 82 LTIHNVEKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFP 161 (242)
T ss_dssp EEECSCCGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSCCSCBCCCCCCCGGGGGSSSCEEEEEEEEEESS
T ss_pred EEECCCCcccCEEEEEeeecCCccccccceeEcCcEEEEEcccccCCCcCCCceEECCChhhcccCCCceEEEEEeeEEC
Confidence 99999999999999999998631 1 11245788865 3443332 444556789999999999885 6
Q ss_pred C-ceEEEeeCce-eeecCCc-eEEEEeC---CeEEEEEcccCccCceeEEEEEEcCCcceEEEEEEEE
Q psy7042 212 P-MEVSLTKNGR-VVQSDDR-FKFTVLD---DYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINI 273 (2245)
Q Consensus 212 ~-~~i~W~~~g~-~l~~~~~-~~~~~~~---~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 273 (2245)
. +.|+|+++|. .+..... ......+ ....|.|..... | |.|+|.|.|..+.......+.+
T Consensus 162 ~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-g~y~C~v~n~~~~~~~~~~~~~ 227 (242)
T 1hxm_B 162 DVIKIHWEEKKSNTILGSQEGNTMKTNDTYMKFSWLTVPEKSL-D-KEHRCIVRHENNKNGVDQEIIF 227 (242)
T ss_dssp CCEEEEEEESSSCCCCCCEECCCEECSSSEEEEEEEEECTGGG-G-SCEEEEEEETTSGGGSCEEEEE
T ss_pred CCeEEEEEcCCCEeecCccccceecCCCcEEEEEEEEEccccC-C-CEEEEEEEeCCCCCCceeEeec
Confidence 4 7999999987 5533210 0011111 124688887765 5 9999999999887655555554
No 336
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.61 E-value=7.3e-15 Score=171.35 Aligned_cols=187 Identities=14% Similarity=0.175 Sum_probs=133.9
Q ss_pred eccCCceEEcCCCeEEEEEEecCcC--CCeEEEeeC--CEec-----------------cCCceEEEEe--cCcEEEEEE
Q psy7042 1701 IVPLKDLVVPLGKLLTLQCEATGTP--VPKCRWLRN--GREI-----------------SSGARYRVET--AGGVFRLHF 1757 (2245)
Q Consensus 1701 ~~~~~~~~~~~G~~v~L~C~~~~~p--~~~v~W~~~--~~~l-----------------~~~~~~~~~~--~~~~~~L~i 1757 (2245)
+..+..+.+.+|++++|.|.+.+.+ .+.+.|+|. +..+ ....|+.+.. ....++|.|
T Consensus 5 ~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I 84 (253)
T 3uzq_A 5 LEQSGAELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHL 84 (253)
T ss_dssp EEECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEE
T ss_pred EecCCCeeecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEEe
Confidence 3445678899999999999998754 678999982 2111 1124566554 345788999
Q ss_pred eeeccCCCeEEEEEEecCceee-EEEEEEEecC---------------CCccccCCCceEEcCCCeEEEEEEEeccCCc-
Q psy7042 1758 NEVTDVDNGDYTCEAYNSVGFA-HTSSRVKIGT---------------PPRIDRMPNALYIPEGDNTKVKIFYAGDQPM- 1820 (2245)
Q Consensus 1758 ~~v~~~d~G~Y~C~~~n~~g~~-~~~~~l~V~~---------------~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~- 1820 (2245)
.+++.+|+|.|.|.+.|..+.. .....|.|.. +|.+...+....+.+|++++|.|.+.+.+.+
T Consensus 85 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~ 164 (253)
T 3uzq_A 85 SSLTSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAVSLGQRATISCRASENVDRY 164 (253)
T ss_dssp CSCCGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEECTTSCEEEEEEESSCCEET
T ss_pred CCCCcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEEeCCCCEEEEEEecCccccC
Confidence 9999999999999999865543 2346677764 4666777778899999999999999998876
Q ss_pred ---EEEEEEC--CEEee------------cCCceEEEEcCCeEEEEEcccCcccceEEEEEEEcCCeee-EEEEEEEEeC
Q psy7042 1821 ---EVSLTKN--GRVVQ------------SDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV-SGTFTINITG 1882 (2245)
Q Consensus 1821 ---~v~W~~~--g~~l~------------~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~v~~ 1882 (2245)
.+.|+|+ +..+. ...++..........|.|.++..+|+|.|+|.|.|..+.. ..-..|.|..
T Consensus 165 ~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~fg~gt~l~v~~ 244 (253)
T 3uzq_A 165 GNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYFCQRSNEVPWTFGGGTKLEIKR 244 (253)
T ss_dssp TEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCCBCCCEEEEECC
T ss_pred CCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEEEEEEEccCCCcEECCCEEEEEcC
Confidence 9999984 32211 1245555555666789999999999999999999975432 2235677766
Q ss_pred CCCCC
Q psy7042 1883 LPGPP 1887 (2245)
Q Consensus 1883 ~p~~~ 1887 (2245)
.++++
T Consensus 245 ~~~~~ 249 (253)
T 3uzq_A 245 PLEHH 249 (253)
T ss_dssp C----
T ss_pred CCCCc
Confidence 55443
No 337
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.60 E-value=4.3e-15 Score=169.84 Aligned_cols=177 Identities=16% Similarity=0.122 Sum_probs=126.9
Q ss_pred CCceEEcCCCeEEEEEEecCcCCC---eEEEeeCCEeccCCc------------------eEEEEe---cCcEEEEEEee
Q psy7042 1704 LKDLVVPLGKLLTLQCEATGTPVP---KCRWLRNGREISSGA------------------RYRVET---AGGVFRLHFNE 1759 (2245)
Q Consensus 1704 ~~~~~~~~G~~v~L~C~~~~~p~~---~v~W~~~~~~l~~~~------------------~~~~~~---~~~~~~L~i~~ 1759 (2245)
+..+.+.+|++++|.|.+.+.|.+ .|.|+|++..+.... |+.+.. .....+|.|.+
T Consensus 6 p~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~ 85 (218)
T 4frw_A 6 SDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRN 85 (218)
T ss_dssp CSEEEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEESS
T ss_pred CCeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEee
Confidence 456889999999999999988765 489999876543211 111111 12345699999
Q ss_pred eccCCCeEEEEEEecCceee-EEEEEEEecCCCc-cccCCCceEEcCCCeEEEEEEEeccCCcEEEEEECCEEeecCCce
Q psy7042 1760 VTDVDNGDYTCEAYNSVGFA-HTSSRVKIGTPPR-IDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRF 1837 (2245)
Q Consensus 1760 v~~~d~G~Y~C~~~n~~g~~-~~~~~l~V~~~p~-~~~~~~~~~~~~g~~~~l~C~~~~~p~~~v~W~~~g~~l~~~~~~ 1837 (2245)
++.+|+|.|.|.+.+..+.. .....+.+..++. .........+..|..+.|.|.+.|.|+|.|+|++++..+......
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~g~p~p~i~W~~~~~~~~~~~~~ 165 (218)
T 4frw_A 86 AVQADEGEYECRVSTFPAGSFQARLRLRVLVPPLPSLNPGPALEEGQGLTLAASCTAEGSPAPSVTWDTEVKGTTSSRSF 165 (218)
T ss_dssp CCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCCCEEEECSCEETTCCSEEEEEEEEEEBSCCEEEEEESSCCEEEEEEE
T ss_pred ccHHHCCceeEEEEeccCceeeeEEEEEEeeeccceeeeeeeeeeeeccccceeeeccCCcCceEEEEECCcccccCceE
Confidence 99999999999998765543 3344455544433 333445566778999999999999999999999998877544322
Q ss_pred EEEEc-CCeEEEEEcccCcccceEEEEEEEcCCeeeEEEEEEEE
Q psy7042 1838 KFTVL-DDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINI 1880 (2245)
Q Consensus 1838 ~~~~~-~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v 1880 (2245)
..... .....|.|.++..+|.|.|+|.|.|.+|..+..+++.|
T Consensus 166 ~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~v 209 (218)
T 4frw_A 166 KHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHIL 209 (218)
T ss_dssp ECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEEC
T ss_pred ecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEEE
Confidence 11100 11347999999999999999999999998776666655
No 338
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.60 E-value=1.3e-14 Score=160.06 Aligned_cols=158 Identities=15% Similarity=0.159 Sum_probs=115.8
Q ss_pred CCceEEcCCCeEEEEEEecC-cCCCeEEEeeCCEecc---CC---------------ceEEEEecCcEEEEEEeeeccCC
Q psy7042 1704 LKDLVVPLGKLLTLQCEATG-TPVPKCRWLRNGREIS---SG---------------ARYRVETAGGVFRLHFNEVTDVD 1764 (2245)
Q Consensus 1704 ~~~~~~~~G~~v~L~C~~~~-~p~~~v~W~~~~~~l~---~~---------------~~~~~~~~~~~~~L~i~~v~~~d 1764 (2245)
+..+.+.+|++++|.|.+.+ .+.+.+.|++++..+. .. .|+.+. ...+|+|.+++.+|
T Consensus 5 p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~---~~~sL~I~~v~~~D 81 (193)
T 2if7_A 5 PLMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFT---QSYSLQLSNLKMED 81 (193)
T ss_dssp CEEEEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEEC---TTCCEEECSCCGGG
T ss_pred CeEEEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEEC---CCeEEEECCCCccc
Confidence 45678999999999999975 4556899999986542 10 133333 13459999999999
Q ss_pred CeEEEEEEecCceeeEEEEEEEecCCCc---cccCCCceEEcCCC-eEEEEEEEecc-CCcEEEEEECCEEeecCCceEE
Q psy7042 1765 NGDYTCEAYNSVGFAHTSSRVKIGTPPR---IDRMPNALYIPEGD-NTKVKIFYAGD-QPMEVSLTKNGRVVQSDDRFKF 1839 (2245)
Q Consensus 1765 ~G~Y~C~~~n~~g~~~~~~~l~V~~~p~---~~~~~~~~~~~~g~-~~~l~C~~~~~-p~~~v~W~~~g~~l~~~~~~~~ 1839 (2245)
+|.|+|.+.+..+.....+.|.|..+|. +.... .....|. +++|.|.+.|. |.+.|+|+++|+.+....
T Consensus 82 ~G~Y~C~~~~~~~~~~~~~~L~V~~~~~~p~i~~~~--~~~~~g~~~v~L~C~~~g~~p~p~i~W~~~g~~l~~~~---- 155 (193)
T 2if7_A 82 TGSYRAQISTKTSAKLSSYTLRILRQLRNIQVTNHS--QLFQNMTCELHLTCSVEDADDNVSFRWEALGNTLSSQP---- 155 (193)
T ss_dssp CEEEEEEEECSSCEEEEEEEEEEECCCEEEEEEECC--C---CSSEEEEEEEEEESCCTTCEEEEEETTEEEESSS----
T ss_pred CceEEEEEEecCCCeEEEEEEEEEccCCCCeEecCc--eeecCCCceEEEEEEEecCCCceEEEEEeCCEEcCCCC----
Confidence 9999999999988777788898877643 32222 1233465 89999999995 578999999998764332
Q ss_pred EEcCCeEEEEEcccCcc-cceEEEEEEEcCCeeeEEEEE
Q psy7042 1840 TVLDDYIIIFIKEIRKE-DAGDYTVNLSNSSGSVSGTFT 1877 (2245)
Q Consensus 1840 ~~~~~~~~l~i~~~~~~-d~G~Y~C~a~n~~g~~~~~~~ 1877 (2245)
.|.|.....+ |+|.|+|.|.|..|..+..+.
T Consensus 156 -------~l~i~~~~~~~d~G~Y~C~a~N~~g~~s~~~~ 187 (193)
T 2if7_A 156 -------NLTVSWDPRISSEQDYTCIAENAVSNLSFSVS 187 (193)
T ss_dssp -------EEEEEECTTTCSCCEEEEEEEETTEEEEEEEE
T ss_pred -------eEEEEeccCcCCCCcEEEEEECCCCccccccc
Confidence 3555444444 899999999999998866543
No 339
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}
Probab=99.60 E-value=6.5e-15 Score=164.47 Aligned_cols=178 Identities=18% Similarity=0.307 Sum_probs=129.3
Q ss_pred CCCcccEEeeee--CceEEEEecCCCCCCCCccceEEEeeeecCC-CceEEecceeeeceEEEecCCCCceeeEEEEEEe
Q psy7042 903 HPPENLHADEFA--GDSLTLYWTPPRDNGGSEITNYVVEKKDYNS-TVWTKVSSYVTTPFVRVRNLAIGSTYEFRVMAEN 979 (2245)
Q Consensus 903 ~~p~~l~~~~~~--~~~~~l~W~~p~~~~g~~i~~y~i~~~~~~~-~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~n 979 (2245)
.+|.+|.+.+++ .+++.|+|.+|. +..+.+|.|+|+.... +.|..+........+.|.+|.|++.|.|+|.|.|
T Consensus 1 s~P~~l~v~~v~~~~~si~l~W~~p~---~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~n 77 (201)
T 2ha1_A 1 SGPVEVFITETPSQPNSHPIQWNAPQ---PSHISKYILRWRPKNSVGRWKEATIPGHLNSYTIKGLKPGVVYEGQLISIQ 77 (201)
T ss_dssp CCCCEEECCSCSCCSSCEEEEEECCS---STTCCEEEEEEEETTCSSCCEEEEECTTCCEEEECSCCTTEEEEEEEEEEC
T ss_pred CCceeEEEEecCCCCCEEEEEEeCCC---CCCceEEEEEEEECCCCCceEEEecCCCccEEEecCCCCCCEEEEEEEEEe
Confidence 368899998877 999999999983 3589999999997554 5677766666678999999999999999999999
Q ss_pred ccccCCCcc-------ccCcccccCCCCCCCC-C----CCCeeEeecCCeEEEEecCCCCCCCCccceEEEEEEecCCcc
Q psy7042 980 QYGLSKPAL-------TIDPIKAKHPFDVPGA-P----GAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDK 1047 (2245)
Q Consensus 980 ~~g~~~~s~-------~~~~~~~~t~~~~p~~-p----~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~ 1047 (2245)
..|.+.++. .+......+....|.+ | .++++...+.+++.|+|.+|. +++.+|.|.|+..+...
T Consensus 78 ~~G~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~~sv~l~W~~p~----~~i~~Y~v~~~~~~~~~ 153 (201)
T 2ha1_A 78 QYGHQEVTRFDFTTTSTSTPVTSNTVTGETTPFSPLVATSESVTEITASSFVVSWVSAS----DTVSGFRVEYELSEEGD 153 (201)
T ss_dssp TTSCEEEEEEEEEECCCCCTTCSCCCCCSCCCCCCSCSCCSSCCCCCSCCEEEECCCSC----TTEEEEEEEEEETTTCC
T ss_pred cccccCceeEEEecCCCCCCcccccccCCCCCCCCccCCceEEEecCCCeEEEEEeCCC----CCccEEEEEEEECCCCC
Confidence 999876531 0111111111122332 2 567888889999999999884 35999999998654433
Q ss_pred ceeccccccCCcceeEEEEeecccccCCccCchhhhhhhhhcccccccccccCCcEEEEEEEEEecCCCCCC
Q psy7042 1048 WIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPW 1119 (2245)
Q Consensus 1048 ~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~v~A~n~~G~~~~ 1119 (2245)
+..... ++.... .+.|.+|.|++.|.|+|+|.|..|.|.+
T Consensus 154 ~~~~~~--v~~~~~------------------------------~~~i~~L~p~t~Y~~~V~A~~~~G~~~~ 193 (201)
T 2ha1_A 154 EPQYLD--LPSTAT------------------------------SVNIPDLLPGRKYIVNVYQISEDGEQSL 193 (201)
T ss_dssp CCEEEE--EETTCC------------------------------EEEECSCCTTCEEEEEEEEEETTSCEEE
T ss_pred ceeEEE--cCCcee------------------------------EEEeCCCCCCCEEEEEEEEEcCCCCccc
Confidence 322111 111111 1269999999999999999999998754
No 340
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.60 E-value=6.2e-15 Score=164.62 Aligned_cols=168 Identities=14% Similarity=0.071 Sum_probs=119.8
Q ss_pred CCCceeccCCceEEcCCCeEEEEEEecCcCCCeEEEeeCCEeccCCceE-EEEecCcEEEEEEeeeccCCCeEEEEEEec
Q psy7042 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARY-RVETAGGVFRLHFNEVTDVDNGDYTCEAYN 1774 (2245)
Q Consensus 1696 ~~p~~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~~~~l~~~~~~-~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n 1774 (2245)
.+|.+...+. ..+.+|++++|.|.+.+ +.+.+.|+|+|..+....+. ..........|.|.+++.+|+|.|+|.+.+
T Consensus 7 ~~P~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~~ 84 (201)
T 1nkr_A 7 RKPSLLAHPG-PLVKSEETVILQCWSDV-MFEHFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGSV 84 (201)
T ss_dssp CCCEEEEESC-SEEETTCCEEEEEEESS-CCSEEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEEEEB
T ss_pred CCCeEEEEcC-CccCCCCcEEEEEeccC-CCCEEEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEEeEec
Confidence 4677776665 67899999999999974 67799999998766422111 111122345699999999999999999986
Q ss_pred Cce-----eeEEEEEEEecC---CCccccCCCceEEcCCCeEEEEEEEeccCCcEEEEEECCEEeecCCceEEEEcC-Ce
Q psy7042 1775 SVG-----FAHTSSRVKIGT---PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLD-DY 1845 (2245)
Q Consensus 1775 ~~g-----~~~~~~~l~V~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~-~~ 1845 (2245)
... .....+.|.|.. +|.+...+. ..+.+|++++|.|.+.+ +.+.+.|+|+|..+...........+ ..
T Consensus 85 ~~~~~~~~~~s~~~~l~V~~~~~~p~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~ 162 (201)
T 1nkr_A 85 THSPYQVSAPSDPLDIVIIGLYEKPSLSAQPG-PTVLAGENVTLSCSSRS-SYDMYHLSREGEAHERRLPAGPKVNGTFQ 162 (201)
T ss_dssp TTBTTCCCCCCCCEEEEEECSSCCCEEEEESC-SEECTTCEEEEEEEESS-CCSEEEEEETTCSSCEEEECEEEETTEEE
T ss_pred CCCCccccCCCCCEEEEeeccCCCCceecCCC-CccCCCCeEEEEEeCCC-CCceEEEEECCcccCcccccccccCCceE
Confidence 431 223445677754 456655444 47889999999999886 56799999999866432211111111 25
Q ss_pred EEEEEcccCcccceEEEEEEEcCC
Q psy7042 1846 IIIFIKEIRKEDAGDYTVNLSNSS 1869 (2245)
Q Consensus 1846 ~~l~i~~~~~~d~G~Y~C~a~n~~ 1869 (2245)
..|.|.++. |+|.|+|.|.+..
T Consensus 163 ~~L~i~~v~--d~G~Y~C~a~~~~ 184 (201)
T 1nkr_A 163 ADFPLGPAT--HGGTYRCFGSFHD 184 (201)
T ss_dssp EEEEEEECC--SCEEEEEEEEETT
T ss_pred EEEEeCCcC--CCeeEEEEEEcCC
Confidence 689999998 9999999998764
No 341
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.60 E-value=9.3e-15 Score=172.66 Aligned_cols=172 Identities=13% Similarity=0.200 Sum_probs=128.2
Q ss_pred CCceeccCCceEEcCCCeEEEEEEecCcCCCeEEEeeCCE-----ec---------cCCceEEEEecCcEEEEEEeeecc
Q psy7042 1697 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGR-----EI---------SSGARYRVETAGGVFRLHFNEVTD 1762 (2245)
Q Consensus 1697 ~p~~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~~~-----~l---------~~~~~~~~~~~~~~~~L~i~~v~~ 1762 (2245)
.+.+...+..+.+.+|++++|.|.+.+.|.+.+.|+|++. .+ ....|+.+...++..+|.|.+++.
T Consensus 12 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 91 (276)
T 3auv_A 12 DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQP 91 (276)
T ss_dssp CCCEEEECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred ceeEEeCCCeEEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCCh
Confidence 4556667788899999999999999998888999998542 11 113577776677788899999999
Q ss_pred CCCeEEEEEEecCcee-eEEEEEEEecCCC-------------c-cccCCCceEEcCCCeEEEEEEEeccC--CcEEEEE
Q psy7042 1763 VDNGDYTCEAYNSVGF-AHTSSRVKIGTPP-------------R-IDRMPNALYIPEGDNTKVKIFYAGDQ--PMEVSLT 1825 (2245)
Q Consensus 1763 ~d~G~Y~C~~~n~~g~-~~~~~~l~V~~~p-------------~-~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~v~W~ 1825 (2245)
+|+|.|.|.+.|..+. ......|.|..+| . ....+....+.+|++++|.|.+.+.+ .+.+.|+
T Consensus 92 ~DsG~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~ 171 (276)
T 3auv_A 92 EDFATYYCQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLSCAASGFTISDYWIHWV 171 (276)
T ss_dssp GGCEEEEEEECSSSSCCCCCCEEEEC-----------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEEEEE
T ss_pred hhCEEEEEEEecCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEecCCCeEEEEEEecCccCCCCEEEEE
Confidence 9999999999987553 2223567776543 1 22344567899999999999999876 5899999
Q ss_pred ECC--EEe---e--------------cCCceEEEEc--CCeEEEEEcccCcccceEEEEEEEcC
Q psy7042 1826 KNG--RVV---Q--------------SDDRFKFTVL--DDYIIIFIKEIRKEDAGDYTVNLSNS 1868 (2245)
Q Consensus 1826 ~~g--~~l---~--------------~~~~~~~~~~--~~~~~l~i~~~~~~d~G~Y~C~a~n~ 1868 (2245)
|++ ..+ . ...++.+... .....|.|.++..+|+|.|+|.|.|.
T Consensus 172 k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 235 (276)
T 3auv_A 172 RQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVF 235 (276)
T ss_dssp EECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred EcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhHCEEEEEEEEcC
Confidence 963 211 1 1245554432 34568999999999999999999998
No 342
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.59 E-value=1.4e-14 Score=169.21 Aligned_cols=175 Identities=15% Similarity=0.240 Sum_probs=132.4
Q ss_pred CCCceeccCCceEEcCCCeEEEEEEecCc--CCCeEEEeeCC--Eec-----------------cCCceEEEE--ecCcE
Q psy7042 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGT--PVPKCRWLRNG--REI-----------------SSGARYRVE--TAGGV 1752 (2245)
Q Consensus 1696 ~~p~~~~~~~~~~~~~G~~v~L~C~~~~~--p~~~v~W~~~~--~~l-----------------~~~~~~~~~--~~~~~ 1752 (2245)
.+|.+...+..+.+.+|++++|.|.+.+. +.+.+.|+|.. ..+ ....|+.+. ..+..
T Consensus 5 ~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~ 84 (256)
T 3juy_B 5 HHQVQLVQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANT 84 (256)
T ss_dssp --CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTE
T ss_pred cceEEEEecCCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCE
Confidence 45667778888999999999999999873 67789999732 111 012466666 33567
Q ss_pred EEEEEeeeccCCCeEEEEEEecC------------ceeeEEEEEEEecC---------------CCccccCCCceEEcCC
Q psy7042 1753 FRLHFNEVTDVDNGDYTCEAYNS------------VGFAHTSSRVKIGT---------------PPRIDRMPNALYIPEG 1805 (2245)
Q Consensus 1753 ~~L~i~~v~~~d~G~Y~C~~~n~------------~g~~~~~~~l~V~~---------------~p~~~~~~~~~~~~~g 1805 (2245)
.+|+|.+++.+|+|.|.|.+.|. .+.......|.|.. +|.+...+....+.+|
T Consensus 85 ~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G 164 (256)
T 3juy_B 85 AYMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAPGTLSLSPG 164 (256)
T ss_dssp EEEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEECSEEEECTT
T ss_pred EEEEECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecCCeEEEeCC
Confidence 88999999999999999999986 33333456778866 3456667788899999
Q ss_pred CeEEEEEEEeccCC-cEEEEEEC--CEEee------------cCCceEEEEcCCeEEEEEcccCcccceEEEEEEEcCCe
Q psy7042 1806 DNTKVKIFYAGDQP-MEVSLTKN--GRVVQ------------SDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSG 1870 (2245)
Q Consensus 1806 ~~~~l~C~~~~~p~-~~v~W~~~--g~~l~------------~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g 1870 (2245)
++++|.|.+.+.+. +.+.|+|. +..+. ...++.+........|.|.++..+|+|.|+|.|.|..+
T Consensus 165 ~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~ 244 (256)
T 3juy_B 165 ERATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFALYYCQVYGASS 244 (256)
T ss_dssp SCEEEEEEESSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECCSSC
T ss_pred CCEEEEEEECCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCHhHCEEEEEEEeeCCC
Confidence 99999999999876 89999982 32221 23456655566677899999999999999999998643
No 343
>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens}
Probab=99.59 E-value=6.7e-13 Score=163.05 Aligned_cols=264 Identities=17% Similarity=0.160 Sum_probs=184.7
Q ss_pred cceEeeCCCeEEEEEeeeecCCCeEEEEeCCeEeeccCeEEEEecCCeEEEEEcCCCCC--cCEEEEEEEEeCCCCceeE
Q psy7042 584 DTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNV--DTAPYRVVAENDLGMDSAI 661 (2245)
Q Consensus 584 ~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~--d~g~y~C~a~n~~g~~~~~ 661 (2245)
....+..|+++++.|.... . ......++. ....+........++|.++... ...+|.|... .....
T Consensus 206 ~~~vv~~GS~vt~~Ci~~~--~-~~~~~l~~~-----~~~~~~l~~~~~~i~v~nl~~~~~sg~n~~C~~~----~~~~g 273 (483)
T 3e0g_A 206 QDKVILVGSDITFCCVSQE--K-VLSALIGHT-----NCPLIHLDGENVAIKIRNISVSASSGTNVVFTTE----DNIFG 273 (483)
T ss_dssp CSEEEETTCCEEEEECCSS--C-EEEEESSSC-----CBCCEECSSSCEEEEECSCCCCCSSCEEEEEEES----SCEEE
T ss_pred cCCEEeCCCCEEEEEEeCc--c-ccceecCcc-----cceeEEecCCEEEEEEeCCCCccCccceEEEecC----Ccccc
Confidence 4566889999999998852 1 222222221 1112234555677888888763 3457999852 23566
Q ss_pred EEEEeeCCCCCCCCCeeeeecCCcEEEEeeCCCCCC--CcccccEEEEeeeCCCCCeEEEce-----eeeeeEEEecCCC
Q psy7042 662 VKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDG--GSNITNYIVEKREHPMSSWIRVGN-----TRFTTMAITGLSP 734 (2245)
Q Consensus 662 ~~l~v~~~P~~p~~~~~~~~~~~si~lsW~~p~~~~--~~~~~~y~v~~~~~~~~~w~~~~~-----~~~~~~~i~~L~p 734 (2245)
+.+.+..+|++|.++.+.....++++++|+++...+ |...+.|.|.|+..+. ...... .....+.+.+|.+
T Consensus 274 ~~l~vg~PP~~P~nlsC~s~~~~sltCsW~pg~dt~l~G~~~t~YtL~y~~~g~--~~~C~~~~~~~~~~~~C~~~~l~~ 351 (483)
T 3e0g_A 274 TVIFAGYPPDTPQQLNCETHDLKEIICSWNPGRVTALVGPRATSYTLVESFSGK--YVRLKRAEAPTNESYQLLFQMLPN 351 (483)
T ss_dssp EEEEEECCCCCCEEEEEEBSSTTEEEEEEECCSCCSCCGGGCCEEEEEETTTCC--EEEECCCSSCSCSCEEEEEECCTT
T ss_pred eEEECcCCCCCCCccEEEecCCCEEEEEECCCCcCCcCCCCCeeEEEEEEECCC--CccccCCcccCCCEEEEEEccCCC
Confidence 778888999999999998888889999999764432 3348899999975422 222211 1235788999999
Q ss_pred CCEEEEEEEEEecccCCCCCCCCccEEecCccccccccccccccCCCceeecccccccccCCceEEEEeeeccCcccccc
Q psy7042 735 GHQYEFRVYAENVYGRSDPSTTSDLITTKDTFKKQIKKRQYDFDETGKKIRGKADEKVSDYDQYVFDIYSKYVPQPVDIK 814 (2245)
Q Consensus 735 ~t~y~~~v~a~n~~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 814 (2245)
.+.|.|+|.|.|..|.+. +. ..+..
T Consensus 352 ~t~Y~f~V~A~N~lG~~~-S~--~~~~~---------------------------------------------------- 376 (483)
T 3e0g_A 352 QEIYNFTLNAHNPLGRSQ-ST--ILVNI---------------------------------------------------- 376 (483)
T ss_dssp CCCEEEEEEEECSSCEEE-EE--EEECG----------------------------------------------------
T ss_pred CcEEEEEEEEEeCCCCcc-cc--eEEEe----------------------------------------------------
Confidence 999999999999998643 10 00000
Q ss_pred ccceecccccccccccCceeEEEEeeecccCCeeEEEeeccCCchhhhhhheeeeeeeccCCCceEeecccccCCcceEE
Q psy7042 815 TSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVL 894 (2245)
Q Consensus 815 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 894 (2245)
T Consensus 377 -------------------------------------------------------------------------------- 376 (483)
T 3e0g_A 377 -------------------------------------------------------------------------------- 376 (483)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEecCCCCCcccEEeeeeCceEEEEecCCCCCCCCccceEEEeeeecCCCc-eEEeccee---eeceEEEecCCCCce
Q psy7042 895 IFEVLDRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTV-WTKVSSYV---TTPFVRVRNLAIGST 970 (2245)
Q Consensus 895 ~~~~~~~P~~p~~l~~~~~~~~~~~l~W~~p~~~~g~~i~~y~i~~~~~~~~~-~~~~~~~~---~~~~~~i~~L~p~~~ 970 (2245)
+-...|.||.++.+....++++.|+|++|...++ .+..|+|+|+..+... |..+.... ....+.+.+|.|++.
T Consensus 377 --~~~VkP~PP~nl~v~~~~stsl~LsW~~P~~~~~-~~L~YeVrYr~~~~~~~~~~vsv~~~~~~~~s~~l~~L~PgT~ 453 (483)
T 3e0g_A 377 --TEKVYPHTPTSFKVKDINSTAVKLSWHLPGNFAK-INFLCEIEIKKSNSVQEQRNVTIQGVENSSYLVALDKLNPYTL 453 (483)
T ss_dssp --GGGBCCCCCEEEEECCSSSSSCCEEEECCSCCTT-SBCCCEEEEECSSSCCCEEECCCBCCSSSBCCCCCCSCCSSSS
T ss_pred --ccccCCCCCeeeEEEEecCCeEEEEECCCCCCCC-ceEEEEEEEEECCCCCceEEEEEeccCCceeEEEEeccCCCcE
Confidence 0013789999999988788999999999875443 6789999999876543 55544321 234678999999999
Q ss_pred eeEEEEEEeccccCCCccccCcccccCCCC
Q psy7042 971 YEFRVMAENQYGLSKPALTIDPIKAKHPFD 1000 (2245)
Q Consensus 971 y~~~v~a~n~~g~~~~s~~~~~~~~~t~~~ 1000 (2245)
|.|+|+|. ..|.|.++..+....++|+++
T Consensus 454 Y~vrVRA~-~~g~g~WSeWS~~~~f~T~E~ 482 (483)
T 3e0g_A 454 YTFRIRCS-TETFWKWSKWSNKKQHLTTEA 482 (483)
T ss_dssp CEEEEECC-CSSCCCCCCCCCCCCCCCCCC
T ss_pred EEEEEEEe-eCCCCCcCCCCCceeeECCCC
Confidence 99999999 778777777777777766543
No 344
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.59 E-value=4.7e-15 Score=141.41 Aligned_cols=95 Identities=29% Similarity=0.511 Sum_probs=87.5
Q ss_pred CCCCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECCeeccCCC--eEEEEEcCcEEEEEEeeeccCCCeEEEEEE
Q psy7042 88 GEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGA--RYRVETAGGVFRLHFNEVTDVDNGDYTCEA 165 (2245)
Q Consensus 88 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~~--~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a 165 (2245)
..||.|...|.++.+.+|+.++|.|.+.|.|.|.|.|+|||..|.... ++.+...++..+|.|.+++.+|+|.|+|.|
T Consensus 3 ~~PP~i~~~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 82 (100)
T 3knb_A 3 GIPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSL 82 (100)
T ss_dssp CEEEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCCEEEeCCCcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEEE
Confidence 358999999999999999999999999999999999999999997644 788888888889999999999999999999
Q ss_pred EcCcccceeEEEEEecC
Q psy7042 166 YNSVGFAHTSSRVKIGT 182 (2245)
Q Consensus 166 ~n~~g~~~~~~~l~V~~ 182 (2245)
.|..|.++.++.|.|+.
T Consensus 83 ~N~~G~~~~~~~l~V~~ 99 (100)
T 3knb_A 83 GNEFGSDSATVNIHIRS 99 (100)
T ss_dssp EETTEEEEEEEEEEEEC
T ss_pred EECCCEEEEEEEEEEEE
Confidence 99999999999999864
No 345
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.59 E-value=3.6e-14 Score=182.82 Aligned_cols=92 Identities=30% Similarity=0.474 Sum_probs=87.3
Q ss_pred CCceEEeeccceeeecCccEEEEEEEEeeCCCeEEEeeCCEeeCCCCcEEEEEeCcEEEEEEcCCCCCCCeEEEEEEEeC
Q psy7042 2086 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNK 2165 (2245)
Q Consensus 2086 ~~p~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~ 2165 (2245)
..|.+...+.+..+.+|+++.|.|.+.|.|.|+|+|+|++.+|..+.++.+..++....|.|.++..+|+|.|+|+|.|.
T Consensus 481 ~~P~~~~~~~~~~v~~G~~~~~~~~v~g~P~P~v~W~k~~~el~~s~~~~i~~~~~~~~L~I~~~~~~D~G~Yt~~A~N~ 560 (573)
T 3uto_A 481 AQPRFIVKPYGTEVGEGQSANFYCRVIASSPPVVTWHKDDRELKQSVKYMKRYNGNDYGLTINRVKGDDKGEYTVRAKNS 560 (573)
T ss_dssp GSCEEEECCCCEEECTTSCEEEEEEEECSSCCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred cCCccccCCCCcEEeCCCcEEEEEEEEccCCCeEEEEECCEEcccCCcEEEEEcCCEEEEEEcCCCcccCcEEEEEEEeC
Confidence 35777878888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeeEEEEEEE
Q psy7042 2166 GGVKSTKAELII 2177 (2245)
Q Consensus 2166 ~G~~~~~~~l~V 2177 (2245)
+|+.+..+.|+|
T Consensus 561 ~G~~~~~v~l~V 572 (573)
T 3uto_A 561 YGTKEEIVFLNV 572 (573)
T ss_dssp TEEEEEEEEEEE
T ss_pred CCcEEEEEEEEE
Confidence 999999999988
No 346
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.59 E-value=1.1e-14 Score=168.83 Aligned_cols=169 Identities=16% Similarity=0.187 Sum_probs=127.4
Q ss_pred eeccCCceEEcCCCeEEEEEEecCcC----CCeEEEeeCC--Eec------------cCCceEEEEecCcEEEEEEeeec
Q psy7042 1700 FIVPLKDLVVPLGKLLTLQCEATGTP----VPKCRWLRNG--REI------------SSGARYRVETAGGVFRLHFNEVT 1761 (2245)
Q Consensus 1700 ~~~~~~~~~~~~G~~v~L~C~~~~~p----~~~v~W~~~~--~~l------------~~~~~~~~~~~~~~~~L~i~~v~ 1761 (2245)
+...+..+.+.+|++++|.|.+.+.| .+.+.|+|++ ..+ ....|+.+...++..+|.|.+++
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 83 (240)
T 1moe_A 4 LTQSPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVE 83 (240)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred eEeeCCeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCCC
Confidence 45556778999999999999999987 7889999952 211 01357777667778889999999
Q ss_pred cCCCeEEEEEEecCcee-eEEEEEEEecCCC------ccccCCCceEEcCCCeEEEEEEEeccCC--cEEEEEEC--CEE
Q psy7042 1762 DVDNGDYTCEAYNSVGF-AHTSSRVKIGTPP------RIDRMPNALYIPEGDNTKVKIFYAGDQP--MEVSLTKN--GRV 1830 (2245)
Q Consensus 1762 ~~d~G~Y~C~~~n~~g~-~~~~~~l~V~~~p------~~~~~~~~~~~~~g~~~~l~C~~~~~p~--~~v~W~~~--g~~ 1830 (2245)
.+|+|.|+|.+.|..+. ....+.|.|..++ .+...+....+.+|++++|.|.+.+.|. +.+.|+|+ |..
T Consensus 84 ~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~ 163 (240)
T 1moe_A 84 ADDVATYYCQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVKQRPEQG 163 (240)
T ss_dssp GGGCEEEEEEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSC
T ss_pred hhhCEEEEEEEccCCceeecCCEEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEEEcCccCCCCEEEEEEECCCCC
Confidence 99999999999998654 3345677776643 2334566778999999999999999874 59999995 322
Q ss_pred ee-----------------cCCceEEEEc--CCeEEEEEcccCcccceEEEEEEEcC
Q psy7042 1831 VQ-----------------SDDRFKFTVL--DDYIIIFIKEIRKEDAGDYTVNLSNS 1868 (2245)
Q Consensus 1831 l~-----------------~~~~~~~~~~--~~~~~l~i~~~~~~d~G~Y~C~a~n~ 1868 (2245)
+. ...++.+... .....|.|.++..+|+|.|+|.|.+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~ 220 (240)
T 1moe_A 164 LEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSEDTAVYYCAPFGY 220 (240)
T ss_dssp CEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECST
T ss_pred cEEEEEEcccCCccccCccccccEEEEEcccCCEEEEEECcCCHHHCEEEEEEEEec
Confidence 10 1234544432 45578999999999999999999853
No 347
>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A
Probab=99.59 E-value=3.5e-14 Score=178.66 Aligned_cols=306 Identities=16% Similarity=0.160 Sum_probs=187.6
Q ss_pred CCCcCEEEEEEEEeCCCCceeEEEEEeeCCCCCCCCCeeeeecCCcEEEEeeCCCCCCC-----cccccEEEEeeeCCCC
Q psy7042 640 SNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGG-----SNITNYIVEKREHPMS 714 (2245)
Q Consensus 640 ~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~P~~p~~~~~~~~~~~si~lsW~~p~~~~~-----~~~~~y~v~~~~~~~~ 714 (2245)
...+.+.|+..|.|..|. ...+.+.-...|.||.++.+...+ ..+.|+|++|..... ...+.|.|+|+... .
T Consensus 80 ~~~~~~~~~v~~~~~~~~-~~~~~~~~~v~p~pP~~l~v~~~~-~~~~l~W~~p~~~~~~~~~~~~~l~Y~v~yr~~~-~ 156 (419)
T 2gys_A 80 VVTDVDYFSFQPDRPLGT-RLTVTLTQHVQPPEPRDLQISTDQ-DHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQ-D 156 (419)
T ss_dssp CTTCEEEEEEEESSCCCE-EEEEEGGGSBCCCCCEEEEEEEET-TEEEEEEECCC-----CCSCGGGEEEEEEEEETT-S
T ss_pred eeecccEEEEeCCccccc-cceEcHHHcccCCCCCceEEEecC-CeEEEEECCCccccccchhccCceEEEEEEccCC-C
Confidence 334456667777666663 233333334579999999988776 699999998754321 35689999999875 6
Q ss_pred CeEEEce--eeeeeEEEe--cCCCCCEEEEEEEEEeccc---CCCCCCCCccEEecCccccccccccccccCCCceeecc
Q psy7042 715 SWIRVGN--TRFTTMAIT--GLSPGHQYEFRVYAENVYG---RSDPSTTSDLITTKDTFKKQIKKRQYDFDETGKKIRGK 787 (2245)
Q Consensus 715 ~w~~~~~--~~~~~~~i~--~L~p~t~y~~~v~a~n~~G---~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 787 (2245)
.|..... .....+.+. +|.|++.|.|+|+|.+..| .|.+|.++..+...
T Consensus 157 ~w~~~~~~~~~~~~~~~~~~~L~p~~~Y~~rVra~~~~g~~~~G~wS~WS~~~~~~------------------------ 212 (419)
T 2gys_A 157 SWEDAAILLSNTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWD------------------------ 212 (419)
T ss_dssp CSTTCEEEEESSSEEEECTTTCCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEE------------------------
T ss_pred ChhheeeecccceEEEechhhcCCCCeEEEEEEEecCCCCCCCcccCCCCCceeee------------------------
Confidence 6743332 123345566 8999999999999999754 46666654432211
Q ss_pred cccccccCCceEEEEeeeccCccccccccceecccccccccccCceeEEEEeeecccCCeeEEEeeccCCchhhhhhhee
Q psy7042 788 ADEKVSDYDQYVFDIYSKYVPQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKE 867 (2245)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 867 (2245)
T Consensus 213 -------------------------------------------------------------------------------- 212 (419)
T 2gys_A 213 -------------------------------------------------------------------------------- 212 (419)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeeeeccCCCceEeecccccCCcceEEEEEEecCCCCCcccEEeeeeCceEEEEecCCCCCCCCccceEEEeeeecCC-C
Q psy7042 868 IDIMNQLHHPKLINLHDAFEDDDEMVLIFEVLDRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNS-T 946 (2245)
Q Consensus 868 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~p~~l~~~~~~~~~~~l~W~~p~~~~g~~i~~y~i~~~~~~~-~ 946 (2245)
+..+.|.+|.++.+.....+.+.+.|+++....+ -.+|.|.|+.... +
T Consensus 213 -----------------------------t~~~~~~~p~~l~c~~~~~~~l~c~W~~~~~~~~--~~~y~l~y~~~~~~g 261 (419)
T 2gys_A 213 -----------------------------SQPGDEAQPQNLECFFDGAAVLSCSWEVRKEVAS--SVSFGLFYKPSPDAG 261 (419)
T ss_dssp -----------------------------CCCCCTTSCEEEEEEECSSSEEEEEEEEEHHHHT--TCCEEEEEECC----
T ss_pred -----------------------------ccccccCCCceEEEEECCceEEEeEEECCCCCCC--ceeEEEEEEecCccc
Confidence 1113467888999988888899999998632211 2459998876532 1
Q ss_pred ----c-eEEec---ce-------eeeceEEEecCCCCceeeEEEEEEeccccCCCccccCcccccCCCCCCCCCCCCeeE
Q psy7042 947 ----V-WTKVS---SY-------VTTPFVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGV 1011 (2245)
Q Consensus 947 ----~-~~~~~---~~-------~~~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~s~~~~~~~~~t~~~~p~~p~~~~~~ 1011 (2245)
. +.... .. .....+.+.+|.+.+.|.++|.|.+..+.-.+ ... ..|.+| .+.+.
T Consensus 262 ~~~~~~~~~C~~~~~~~~~~~~~~~~c~~~~~~l~~~~~y~i~V~a~~~~~~~~~---~~~-------v~p~PP-~l~v~ 330 (419)
T 2gys_A 262 SAVLLREEECSPVLREGLGSLHTRHHCQIPVPDPATHGQYIVSVQPRRAEKHIKS---SVN-------IQMAPP-SLQVT 330 (419)
T ss_dssp -CCCCCCEECCCEEEECCTTTEEEEEEEEECSCTTTCCEEEEEEEECCCCEEEEG---GGS-------BCCCCC-EEEEC
T ss_pred cccCcccccCCCcccccCCCcceeEEeEEECccCCccCEEEEEEEEccCCccccc---eEE-------EEECCC-CeEEE
Confidence 1 22111 10 12336778889999999999999765442110 111 135555 34444
Q ss_pred eecCCeEEEEecCCCCCCCCccceEEEEEEecCCccceeccccccCCcceeEEEEeecccccCCccCchhhhhhhhhccc
Q psy7042 1012 DSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFI 1091 (2245)
Q Consensus 1012 ~~~~~~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 1091 (2245)
. ..+.+.|+|++|....+..+..|.|+|+..++ .|......... .. +
T Consensus 331 ~-~~~~l~l~W~~P~~~~~~~~l~Yev~y~~~~~-~w~~~~~~~~~-~~------------------------------~ 377 (419)
T 2gys_A 331 K-DGDSYSLRWETMKMRYEHIDHTFEIQYRKDTA-TWKDSKTETLQ-NA------------------------------H 377 (419)
T ss_dssp ----CCCEEEEEC--------CEEEEEEEECSSS-CSTTSCEEEEE-SC------------------------------S
T ss_pred E-eCCeEEEEECCCcccccccceEEEEEEEcCCC-Ccceeeccccc-cc------------------------------c
Confidence 4 47899999999854222236799999997653 34321111000 00 1
Q ss_pred ccccccccCCcEEEEEEEEEecCC--CCCCCCCCccee
Q psy7042 1092 PNRVTSLIENHEYEFRVCAVNAAG--QGPWSSSSDIIM 1127 (2245)
Q Consensus 1092 ~~~i~~L~~~~~Y~~~v~A~n~~G--~~~~s~~~~~~~ 1127 (2245)
.+.|.+|.|++.|.|+|+|.+..| .|.+|..+....
T Consensus 378 ~~~l~~L~p~t~Y~~qVRa~~~~g~~~G~wS~WS~~~~ 415 (419)
T 2gys_A 378 SMALPALEPSTRYWARVRVRTSRTGYNGIWSEWSEARS 415 (419)
T ss_dssp EEECCCCCSSCCCEEEEEEEECCTTCCBCCCCCCCCEE
T ss_pred EEEeccCCCCCeEEEEEEEEEcCCCCCCccCCCCCCeE
Confidence 126999999999999999999874 566776665443
No 348
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.59 E-value=6.3e-15 Score=170.53 Aligned_cols=173 Identities=14% Similarity=0.184 Sum_probs=123.3
Q ss_pred CceecCCcceEEeCCCeEEEEEEEeeecCCceEEEEC--------------Ceecc---CCCeEEEEE-cCcEEEEEEee
Q psy7042 91 PDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRN--------------GREIS---SGARYRVET-AGGVFRLHFNE 152 (2245)
Q Consensus 91 P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~--------------g~~l~---~~~~~~~~~-~~~~~~L~i~~ 152 (2245)
+.++.+|..+.+.+|+.|+|.|.+.+ |.+.|.|+|. +.... ..+|+.+.. .++..+|.|.+
T Consensus 3 ~~v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~ 81 (240)
T 3q5y_A 3 SGVVQSPRHIIKEKGGRSVLTCIPIS-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSA 81 (240)
T ss_dssp CCCEEECSEEEEETTCCEEEEEECCT-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECS
T ss_pred cccccCcceeeecCCCcEEEEEEeCC-CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECc
Confidence 45667788899999999999999876 7789999992 21111 124676665 33567899999
Q ss_pred eccCCCeEEEEEEEcCc---ccceeEEEEEec------CCCeee-cCCCceEEcCCCeEEEEEEEec-CCCc-eEEEeeC
Q psy7042 153 VTDVDNGDYTCEAYNSV---GFAHTSSRVKIG------TPPRID-RMPNALYIPEGDNTKVKIFYAG-DQPM-EVSLTKN 220 (2245)
Q Consensus 153 ~~~~d~G~Y~C~a~n~~---g~~~~~~~l~V~------~~P~~~-~~~~~~~v~~G~~~~l~C~~~g-~p~~-~i~W~~~ 220 (2245)
++.+|+|.|+|.|.+.. ......+.|.|. .+|.+. ..+....+.+|+.++|.|.+.| .|.+ .++|+||
T Consensus 82 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~ 161 (240)
T 3q5y_A 82 LELEDSAMYFCASSLRWGDEQYFGPGTRLTVLEDLRNVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVN 161 (240)
T ss_dssp CCGGGCEEEEEEEESSTTBCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEET
T ss_pred CChhHCEEEEEEEccCCCcceEEcCCEEEEEeccccCCCCCeeEEeCCchhhcccCCceEEEEEEeeEECCCeEEEEEEC
Confidence 99999999999998422 222234566665 456554 3455556778999999999988 6655 7899999
Q ss_pred ceeeecCCceE---EEEeCCe----EEEEEcccCccC-ceeEEEEEEcCCcc
Q psy7042 221 GRVVQSDDRFK---FTVLDDY----IIIFIKEIRKED-AGDYTVNLSNSSGS 264 (2245)
Q Consensus 221 g~~l~~~~~~~---~~~~~~~----~~L~i~~~~~~d-~G~Y~C~a~n~~g~ 264 (2245)
|..+....... ....+.. +.|.|.....+| .|.|+|.|.|....
T Consensus 162 g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~~~ 213 (240)
T 3q5y_A 162 GKEVHSGVSTDPQAYKESNYSYSLSSRLRVSATFWHNPRNHFRCQVQFHGLS 213 (240)
T ss_dssp TEEECTTEEECSSCEEEETTEEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred CEECcCcEecCCceeeCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCC
Confidence 99986543211 1111222 248899998888 77999999987643
No 349
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.59 E-value=4.3e-15 Score=168.75 Aligned_cols=171 Identities=12% Similarity=0.166 Sum_probs=121.5
Q ss_pred CCceEEcCCCeEEEEEEe-cCcC-CCeEEEeeCC--Eec------------cCCceEEEEecCcEEEEEEeeeccCCCeE
Q psy7042 1704 LKDLVVPLGKLLTLQCEA-TGTP-VPKCRWLRNG--REI------------SSGARYRVETAGGVFRLHFNEVTDVDNGD 1767 (2245)
Q Consensus 1704 ~~~~~~~~G~~v~L~C~~-~~~p-~~~v~W~~~~--~~l------------~~~~~~~~~~~~~~~~L~i~~v~~~d~G~ 1767 (2245)
|..+.+.+|++++|.|.+ .+.+ .+.+.|+|++ ..+ ....|+.+...++..+|.|.+++.+|+|.
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 86 (216)
T 2xzc_L 7 PPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEAD 86 (216)
T ss_dssp CSEEEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEE
T ss_pred CCcEEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccCEE
Confidence 456889999999999995 4443 5789999953 221 11347777666778889999999999999
Q ss_pred EEEEEecCce--eeEEEEEEEec---CCCccccCCCceEEcCCCeEEEEEEEec-cCCc-EEEEEECCEEeecCCceEE-
Q psy7042 1768 YTCEAYNSVG--FAHTSSRVKIG---TPPRIDRMPNALYIPEGDNTKVKIFYAG-DQPM-EVSLTKNGRVVQSDDRFKF- 1839 (2245)
Q Consensus 1768 Y~C~~~n~~g--~~~~~~~l~V~---~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~v~W~~~g~~l~~~~~~~~- 1839 (2245)
|+|.+.|..+ .......|.|. .+|.+...+.......|+.++|.|.+.| .|++ .|+|+|+|+.+........
T Consensus 87 Y~C~~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~ 166 (216)
T 2xzc_L 87 YYCGTWDSSLNPVFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVT 166 (216)
T ss_dssp EEEEEECTTSCEEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEEC
T ss_pred EEEEEEeCCCcceECCCEEEEEcCCCCCCceEEeCCChhhccCCcEEEEEEEEeEcCCceEEEEEECCeecCCCeeEecC
Confidence 9999999876 22223567775 4566554333222346889999999998 4554 9999999998755411111
Q ss_pred -EEcCC-----eEEEEEcccCcccceEEEEEEEcCCeeeEE
Q psy7042 1840 -TVLDD-----YIIIFIKEIRKEDAGDYTVNLSNSSGSVSG 1874 (2245)
Q Consensus 1840 -~~~~~-----~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~ 1874 (2245)
....+ ...|.|..+..+|.|.|+|.|.|.......
T Consensus 167 ~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~ 207 (216)
T 2xzc_L 167 EQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPV 207 (216)
T ss_dssp CCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSCE
T ss_pred cccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCCCce
Confidence 11111 137899999999999999999998765443
No 350
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.59 E-value=7.3e-15 Score=170.77 Aligned_cols=173 Identities=18% Similarity=0.259 Sum_probs=124.3
Q ss_pred CceecCCcceEEeCCCeEEEEEEEeeecCCceEEEE--------------CCeeccC----CCeEEEEEc-CcEEEEEEe
Q psy7042 91 PDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLR--------------NGREISS----GARYRVETA-GGVFRLHFN 151 (2245)
Q Consensus 91 P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~--------------~g~~l~~----~~~~~~~~~-~~~~~L~i~ 151 (2245)
+.++..|..+.+.+|++++|.| ..+.|.+.|.|+| ++..+.. ..|+.+... .+..+|.|.
T Consensus 3 ~~v~~~p~~v~v~~G~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~ 81 (245)
T 4ei6_B 3 PKVLQIPSHQIIDMGQMVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQ 81 (245)
T ss_dssp CCCEEECSEEEEETTCCEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEEC
T ss_pred cceEeCCceEEecCCCCEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEEC
Confidence 5677788889999999999999 6677888999998 2222221 157777653 446689999
Q ss_pred eeccCCCeEEEEEEEcCc----ccceeEEEEEec------CCCeee-cCCCceEEcCCCeEEEEEEEec-CCCc-eEEEe
Q psy7042 152 EVTDVDNGDYTCEAYNSV----GFAHTSSRVKIG------TPPRID-RMPNALYIPEGDNTKVKIFYAG-DQPM-EVSLT 218 (2245)
Q Consensus 152 ~~~~~d~G~Y~C~a~n~~----g~~~~~~~l~V~------~~P~~~-~~~~~~~v~~G~~~~l~C~~~g-~p~~-~i~W~ 218 (2245)
+++.+|+|.|.|.|.+.. +.....+.|.|. .+|.+. ..|....+.+|+.++|.|.+.| .|.+ .+.|+
T Consensus 82 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~ 161 (245)
T 4ei6_B 82 PTALEDSAVYFCASSFWGAYAEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWW 161 (245)
T ss_dssp SCCGGGCEEEEEEEECSSTTCCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEE
T ss_pred CCCHhHCEEEEEEEccCCCcceEEEcCCcEEEEecccCCCCCceEEEeCCCcccccCCCceEEEEEEeeEeCCCeEEEEE
Confidence 999999999999999632 223334567776 356554 4455556778999999999988 4544 89999
Q ss_pred eCceeeecCCceEEEE-------eCC----eEEEEEcccCccC-ceeEEEEEEcCCcc
Q psy7042 219 KNGRVVQSDDRFKFTV-------LDD----YIIIFIKEIRKED-AGDYTVNLSNSSGS 264 (2245)
Q Consensus 219 ~~g~~l~~~~~~~~~~-------~~~----~~~L~i~~~~~~d-~G~Y~C~a~n~~g~ 264 (2245)
|||..+.......... .+. ...|.|.....+| +|.|+|.|.|....
T Consensus 162 ~~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~ytC~v~~~~l~ 219 (245)
T 4ei6_B 162 VNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLS 219 (245)
T ss_dssp ETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred ECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEECCCC
Confidence 9999986532211000 011 1348888888888 99999999987643
No 351
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=99.59 E-value=2.1e-14 Score=159.98 Aligned_cols=174 Identities=19% Similarity=0.305 Sum_probs=133.8
Q ss_pred cCCCCCcccEEeeeeCceEEEEecCCCCCCCCccceEEEeeeecCCCce-EEecceeeeceEEEecCCCCceeeEEEEEE
Q psy7042 900 DRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVW-TKVSSYVTTPFVRVRNLAIGSTYEFRVMAE 978 (2245)
Q Consensus 900 ~~P~~p~~l~~~~~~~~~~~l~W~~p~~~~g~~i~~y~i~~~~~~~~~~-~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~ 978 (2245)
++| +|.+|.+...+++++.|+|++|.. ..+.+|.|+|...+...+ ...........+.+.+|.|++.|.|+|.|.
T Consensus 22 ~~P-~P~~l~~~~~~~~sv~lsW~~p~~---~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~ 97 (203)
T 2gee_A 22 EVP-QPTDLSFVDITDSSIGLRWTPLNS---STIIGYRITVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVYTV 97 (203)
T ss_dssp CCC-CCEEEEEECCTTTCEEEEEECCSS---SSCCEEEEEEEESSSSSCCEEEEEETTCCEEEECSCCTTCEEEEEEEEE
T ss_pred cCc-CCCccEEEecCCCEEEEEecCCCC---CCccEEEEEEEECCCCCCceeEEcCCCccEEEeCCCCCCCEEEEEEEEE
Confidence 577 899999999999999999999862 378999999997665533 334444567899999999999999999999
Q ss_pred eccccCCCccccCcccccCCCCCCCCCCCCeeEeecCCeEEEEecCCCCCCCCccceEEEEEEecCCcc-ceeccccccC
Q psy7042 979 NQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDK-WIKASMAHIP 1057 (2245)
Q Consensus 979 n~~g~~~~s~~~~~~~~~t~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~-~~~~~~~~~~ 1057 (2245)
|..|.+.+. .+.+....| +|.++++...+.+++.|+|++|.. +++.+|.|.|+..++.. +..... .
T Consensus 98 ~~~g~s~~~------~~~t~~~~p-~P~~l~~~~~~~~sv~l~W~~p~~---~~i~~Y~v~~~~~~~~~~~~~~~~---~ 164 (203)
T 2gee_A 98 KNGGESTPT------TLTQQTAVP-PPTDLRFTNIGPDTMRVTWAPPPS---IDLTNFLVRYSPVKNEEDVAELSI---S 164 (203)
T ss_dssp SSSCBCCCE------EEEEECCCC-CCEEEEEEEEETTEEEEEEECCSS---CCCSEEEEEEEETTCGGGCEEEEE---C
T ss_pred eCCCccccE------eeeecCCCc-CCCceEEEEcCCCEEEEEEcCCCC---CCccEEEEEEEECCCCCccEEEEc---C
Confidence 988876543 233344555 789999999999999999999852 36899999998755432 222111 1
Q ss_pred CcceeEEEEeecccccCCccCchhhhhhhhhcccccccccccCCcEEEEEEEEEecCCCCCCC
Q psy7042 1058 DTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWS 1120 (2245)
Q Consensus 1058 ~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~v~A~n~~G~~~~s 1120 (2245)
.... .++|.+|.|++.|.|+|+|.|..|.|.+.
T Consensus 165 ~~~~------------------------------~~~i~~L~p~t~Y~~~V~A~~~~g~s~p~ 197 (203)
T 2gee_A 165 PSDN------------------------------AVVLTNLLPGTEYVVSVSSVYEQHESTPL 197 (203)
T ss_dssp TTCC------------------------------EEEECSCCTTCEEEEEEEEEETTEECCCE
T ss_pred CCcC------------------------------EEEECCCCCCCEEEEEEEEecCCCcCCCe
Confidence 1111 12699999999999999999999987643
No 352
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.59 E-value=7.5e-16 Score=174.51 Aligned_cols=168 Identities=11% Similarity=0.186 Sum_probs=124.1
Q ss_pred CCceEEcCCCeEEEEEEecCcCCCeEEEeeC--CEecc------------CCceEEEEecCcEEEEEEeeeccCCCeEEE
Q psy7042 1704 LKDLVVPLGKLLTLQCEATGTPVPKCRWLRN--GREIS------------SGARYRVETAGGVFRLHFNEVTDVDNGDYT 1769 (2245)
Q Consensus 1704 ~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~--~~~l~------------~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 1769 (2245)
+..+.+.+|++++|.|.+.+.|.+.+.|+|+ +..+. ...|+.+...++..+|.|.+++.+|+|.|+
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 85 (212)
T 1nfd_E 6 PSSASVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDEAAYY 85 (212)
T ss_dssp CSEEEEETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCSEEE
T ss_pred CCeEEEeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccCEEEE
Confidence 5668899999999999998888888999985 33221 135777766777788999999999999999
Q ss_pred EEEecC-cee--eEEEEEEEec----CCCccccCCCceEEcCCCeEEEEEEEecc-CC-cEEEEEECCEEeecCCceEEE
Q psy7042 1770 CEAYNS-VGF--AHTSSRVKIG----TPPRIDRMPNALYIPEGDNTKVKIFYAGD-QP-MEVSLTKNGRVVQSDDRFKFT 1840 (2245)
Q Consensus 1770 C~~~n~-~g~--~~~~~~l~V~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~v~W~~~g~~l~~~~~~~~~ 1840 (2245)
|.+.|. .+. ......|.|. .+|.+...+....+.+|+.+.|.|.+.|. |+ +.|+|+|+|+.+.........
T Consensus 86 C~~~n~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~ 165 (212)
T 1nfd_E 86 CLSSYGDNNDLVFGSGTQLTVLRGPKSSPKVTVFPPSPEELRTNKATLVCLVNDFYPGSATVTWKANGATINDGVKTTKP 165 (212)
T ss_dssp EEEEETTTTEEEECCCEEEEEECCCCBCCEEECCCCCHHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEECSSCBCCCC
T ss_pred EEEEcccCcccccCCceEEEEccCCCCCCEEEeeCCchHhccCCceEEEEEEEeeECCccEEEEEECCeEcCCCeecCCc
Confidence 999963 221 1223456663 56766655544455679999999999987 55 799999999988654221000
Q ss_pred E-cCC----eEEEEEcccCcccceEEEEEEEcCCee
Q psy7042 1841 V-LDD----YIIIFIKEIRKEDAGDYTVNLSNSSGS 1871 (2245)
Q Consensus 1841 ~-~~~----~~~l~i~~~~~~d~G~Y~C~a~n~~g~ 1871 (2245)
. ..+ ...|.|.++..+|+|.|+|.|.|..+.
T Consensus 166 ~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 201 (212)
T 1nfd_E 166 SKQGQNYMTSSYLSLTADQWKSHNRVSCQVTHEGET 201 (212)
T ss_dssp BCSSSCEEEEEBCCEEHHHHHTCSCEEEEEECTTTT
T ss_pred eecCCCceEEEEEEEchhhcCCCCeEEEEEEeCCce
Confidence 0 011 245889999999999999999998765
No 353
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=99.58 E-value=2.4e-14 Score=157.56 Aligned_cols=173 Identities=21% Similarity=0.338 Sum_probs=132.7
Q ss_pred eeCCCCCCCCCeeeeecCCcEEEEeeCCCCCCCcccccEEEEeeeCCCCCeEEE-ceeeeeeEEEecCCCCCEEEEEEEE
Q psy7042 666 ISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRV-GNTRFTTMAITGLSPGHQYEFRVYA 744 (2245)
Q Consensus 666 v~~~P~~p~~~~~~~~~~~si~lsW~~p~~~~~~~~~~y~v~~~~~~~~~w~~~-~~~~~~~~~i~~L~p~t~y~~~v~a 744 (2245)
+..+|.+|.++.+..++.+++.|+|.+|. +.+.+|.|+|+... ..+... .......+.+.+|.|++.|.|+|.|
T Consensus 3 ~~t~p~~P~~l~~~~~~~~sv~l~W~~p~----~~i~~Y~v~~~~~~-~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a 77 (186)
T 1qr4_A 3 AGTDLDNPKDLEVSDPTETTLSLRWRRPV----AKFDRYRLTYVSPS-GKKNEMEIPVDSTSFILRGLDAGTEYTISLVA 77 (186)
T ss_dssp -----CCCEEEEEESCCSSEEEEEEECCS----SCCSEEEEEEECTT-CCEEEEEECTTCSEEEEESCCSSCEEEEEEEE
T ss_pred ccCCCcCCCceEEEecCCCEEEEEEeCCC----CCccEEEEEEEeCC-CCeeEEECCCCCCEEEECCCCCCCEEEEEEEE
Confidence 34678999999999999999999999762 37889999998543 333322 2333568999999999999999999
Q ss_pred EecccCCCCCCCCccEEecCccccccccccccccCCCceeecccccccccCCceEEEEeeeccCccccccccceeccccc
Q psy7042 745 ENVYGRSDPSTTSDLITTKDTFKKQIKKRQYDFDETGKKIRGKADEKVSDYDQYVFDIYSKYVPQPVDIKTSSVYDHYDI 824 (2245)
Q Consensus 745 ~n~~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 824 (2245)
.|..|.+.+..
T Consensus 78 ~~~~~~s~~~~--------------------------------------------------------------------- 88 (186)
T 1qr4_A 78 EKGRHKSKPTT--------------------------------------------------------------------- 88 (186)
T ss_dssp ESSSCBCCCEE---------------------------------------------------------------------
T ss_pred EcCCccCCCEE---------------------------------------------------------------------
Confidence 98655432110
Q ss_pred ccccccCceeEEEEeeecccCCeeEEEeeccCCchhhhhhheeeeeeeccCCCceEeecccccCCcceEEEEEEecCCCC
Q psy7042 825 LEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFEVLDRPHP 904 (2245)
Q Consensus 825 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ 904 (2245)
......|.+
T Consensus 89 -----------------------------------------------------------------------~~~~t~p~~ 97 (186)
T 1qr4_A 89 -----------------------------------------------------------------------IKGSTVVGS 97 (186)
T ss_dssp -----------------------------------------------------------------------EEEECCCCC
T ss_pred -----------------------------------------------------------------------EEEECCCCC
Confidence 011135788
Q ss_pred CcccEEeeeeCceEEEEecCCCCCCCCccceEEEeeeecCCCceEEecceeeeceEEEecCCCCceeeEEEEEEeccccC
Q psy7042 905 PENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFVRVRNLAIGSTYEFRVMAENQYGLS 984 (2245)
Q Consensus 905 p~~l~~~~~~~~~~~l~W~~p~~~~g~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~~ 984 (2245)
|.++.+...+.+++.|+|.+|. + .+.+|.|+|+......+...........+.|.+|.|++.|.|+|+|.|..|.+
T Consensus 98 P~~l~~~~~~~~sv~l~W~~p~---~-~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s 173 (186)
T 1qr4_A 98 PKGISFSDITENSATVSWTPPR---S-RVDSYRVSYVPITGGTPNVVTVDGSKTRTKLVKLVPGVDYNVNIISVKGFEES 173 (186)
T ss_dssp CSCEEEESCCSSCEEEEECCCS---S-CCSEEEEEEEETTCCCCEEEEEETTCCEEEECSCCSSCEEEEEEEEEETTEEC
T ss_pred CCccEEEEeCCCEEEEEEECCC---C-cccEEEEEEEeCCCCCceEEEcCCCcCEEEEcCCCCCCEEEEEEEEEcCCCcC
Confidence 9999999999999999999874 2 79999999998766666666666677899999999999999999999999987
Q ss_pred CCc
Q psy7042 985 KPA 987 (2245)
Q Consensus 985 ~~s 987 (2245)
.+.
T Consensus 174 ~p~ 176 (186)
T 1qr4_A 174 EPI 176 (186)
T ss_dssp CCE
T ss_pred cCE
Confidence 654
No 354
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.58 E-value=1.5e-14 Score=167.17 Aligned_cols=170 Identities=16% Similarity=0.235 Sum_probs=124.1
Q ss_pred ceeccCCceEEcCCCeEEEEEEecCcCCCeEEEeeCC--Ee---c---------cCCceEEEEecCcEEEEEEeeeccCC
Q psy7042 1699 DFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNG--RE---I---------SSGARYRVETAGGVFRLHFNEVTDVD 1764 (2245)
Q Consensus 1699 ~~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~~--~~---l---------~~~~~~~~~~~~~~~~L~i~~v~~~d 1764 (2245)
.+...+..+.+.+|++++|.|.+.+.|.+.+.|+|+. .. + ....|+.+...+...+|.|.+++.+|
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 82 (242)
T 2znx_A 3 VLTQSPATLSVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETED 82 (242)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGG
T ss_pred cEEEcCCeEEEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChHH
Confidence 3455667789999999999999999888899999853 11 1 11357777666777889999999999
Q ss_pred CeEEEEEEecCceee-EEEEEEEecCCCc-------------cccCCCceEEcCCCeEEEEEEEeccC--CcEEEEEEC-
Q psy7042 1765 NGDYTCEAYNSVGFA-HTSSRVKIGTPPR-------------IDRMPNALYIPEGDNTKVKIFYAGDQ--PMEVSLTKN- 1827 (2245)
Q Consensus 1765 ~G~Y~C~~~n~~g~~-~~~~~l~V~~~p~-------------~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~v~W~~~- 1827 (2245)
+|.|.|.+.|..+.. .....|.|..+|. ....+....+.+|++++|.|.+.+.| .+.+.|+|+
T Consensus 83 ~G~Y~C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~ 162 (242)
T 2znx_A 83 FGMYFCQQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKPSQTLSLTCSVTGDSITSDYXSXIRKF 162 (242)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEEECCSEECTTSCEEEEEEEESSCGGGSCEEEEEEC
T ss_pred CEEEEEeEecCCceEECCCEEEEEcCCCCCCcccccccccceeeecCCcceecCCCeEEEEEEEEccccCCcceeeEeeC
Confidence 999999999875432 2345778876653 22233345689999999999999876 478999984
Q ss_pred -CEEee----------------cCCceEEEE--cCCeEEEEEcccCcccceEEEEEEEcC
Q psy7042 1828 -GRVVQ----------------SDDRFKFTV--LDDYIIIFIKEIRKEDAGDYTVNLSNS 1868 (2245)
Q Consensus 1828 -g~~l~----------------~~~~~~~~~--~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 1868 (2245)
+..+. ...++.+.. ......|.|.++..+|+|.|+|.|.|.
T Consensus 163 ~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~ 222 (242)
T 2znx_A 163 PGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTATYYCANXDG 222 (242)
T ss_dssp TTSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGGCEEEEEEETTS
T ss_pred CCCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCcCEEEEEeccCC
Confidence 33221 134455443 234578999999999999999999884
No 355
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.58 E-value=1e-14 Score=169.48 Aligned_cols=174 Identities=21% Similarity=0.250 Sum_probs=122.6
Q ss_pred ceecCCcceEEeCCCeEEEEEEEeeecCCceEEEEC--Ceec--------------cCCCeEEEEE-cCcEEEEEEeeec
Q psy7042 92 DFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRN--GREI--------------SSGARYRVET-AGGVFRLHFNEVT 154 (2245)
Q Consensus 92 ~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~--g~~l--------------~~~~~~~~~~-~~~~~~L~i~~~~ 154 (2245)
.++.+|..+.+.+|+.|+|.|.+.+.|.+.|.|+|. +..+ ...+|+.+.. ..+..+|.|.+++
T Consensus 3 ~v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~ 82 (245)
T 3nfj_J 3 TIHQWPATLVQPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLL 82 (245)
T ss_dssp EEEEECSEEEEETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCC
T ss_pred eeeCCCceEEecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCC
Confidence 345667888999999999999999989999999992 2110 1124555554 3456789999999
Q ss_pred cCCCeEEEEEEEcCcc------cceeEEEEEecC------CCeeec-CCCceEEcCCCeEEEEEEEecC-CCc-eEEEee
Q psy7042 155 DVDNGDYTCEAYNSVG------FAHTSSRVKIGT------PPRIDR-MPNALYIPEGDNTKVKIFYAGD-QPM-EVSLTK 219 (2245)
Q Consensus 155 ~~d~G~Y~C~a~n~~g------~~~~~~~l~V~~------~P~~~~-~~~~~~v~~G~~~~l~C~~~g~-p~~-~i~W~~ 219 (2245)
.+|+|.|.|.|.|..| .....+.|.|.. +|.+.. .+....+.+|+.++|.|.+.|. |++ .+.|+|
T Consensus 83 ~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k 162 (245)
T 3nfj_J 83 LSDSGFYLCAWSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSWWV 162 (245)
T ss_dssp GGGCEEEEEEEECCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE
T ss_pred hhhCEEEEEEEeeccCCCceeEEECCCeEEEEEcccCCCCCCceEeecCCcccccCCCceEEEEEEccCcCCCEEEEEEE
Confidence 9999999999998332 222345677765 565543 3444456679999999999984 444 789999
Q ss_pred CceeeecCCceEE---E-----EeCC---eEEEEEcccCccC-ceeEEEEEEcCCcce
Q psy7042 220 NGRVVQSDDRFKF---T-----VLDD---YIIIFIKEIRKED-AGDYTVNLSNSSGSV 265 (2245)
Q Consensus 220 ~g~~l~~~~~~~~---~-----~~~~---~~~L~i~~~~~~d-~G~Y~C~a~n~~g~~ 265 (2245)
||..+........ . ..+. ...|.|.....+| .|.|+|.|.|.....
T Consensus 163 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~~YtC~v~~~~~~~ 220 (245)
T 3nfj_J 163 NGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSE 220 (245)
T ss_dssp TTEEECTTEEECSSCEESSSSSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCS
T ss_pred CCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEECCCCC
Confidence 9999865321100 0 0111 1368888888888 669999999986543
No 356
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.58 E-value=1.9e-14 Score=168.15 Aligned_cols=180 Identities=14% Similarity=0.228 Sum_probs=132.3
Q ss_pred CceEEcCCCeEEEEEEecCcC--CCeEEEeeCC--Eec-----------------cCCceEEEEec--CcEEEEEEeeec
Q psy7042 1705 KDLVVPLGKLLTLQCEATGTP--VPKCRWLRNG--REI-----------------SSGARYRVETA--GGVFRLHFNEVT 1761 (2245)
Q Consensus 1705 ~~~~~~~G~~v~L~C~~~~~p--~~~v~W~~~~--~~l-----------------~~~~~~~~~~~--~~~~~L~i~~v~ 1761 (2245)
..+.+.+|++++|.|.+.+.+ .+.+.|+|.. ..+ ....|+.+..+ ....+|.|.+++
T Consensus 10 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 89 (256)
T 3umt_A 10 GLELVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRSLT 89 (256)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CceEEcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECCCC
Confidence 346799999999999998765 6789998732 111 01245665543 457789999999
Q ss_pred cCCCeEEEEEEecC----ceeeEEEEEEEecC----------------CCccccCCCceEEcCCCeEEEEEEEeccCCcE
Q psy7042 1762 DVDNGDYTCEAYNS----VGFAHTSSRVKIGT----------------PPRIDRMPNALYIPEGDNTKVKIFYAGDQPME 1821 (2245)
Q Consensus 1762 ~~d~G~Y~C~~~n~----~g~~~~~~~l~V~~----------------~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~ 1821 (2245)
.+|+|.|.|.+.|. .+.......|.|.. +|.+...+....+.+|++++|.|.+.+.|.+.
T Consensus 90 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~ 169 (256)
T 3umt_A 90 SEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSSLSASLGERVSITCRASQDIGSN 169 (256)
T ss_dssp GGGCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEECSEEEECTTCCEEEEEEESSCCTTC
T ss_pred cccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCCeEEEECCCCEEEEEEEecCCCcE
Confidence 99999999999987 33334456777774 66777777888999999999999999998889
Q ss_pred EEEEEC--CEEee------------cCCceEEEEcCCeEEEEEcccCcccceEEEEEEEcCCeeeE-EEEEEEEeCCC
Q psy7042 1822 VSLTKN--GRVVQ------------SDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVS-GTFTINITGLP 1884 (2245)
Q Consensus 1822 v~W~~~--g~~l~------------~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~-~~~~l~v~~~p 1884 (2245)
+.|+|+ +..+. ...++..........|.|.++..+|+|.|+|.|.|..+..- ....|.|...+
T Consensus 170 v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~L~V~~~~ 247 (256)
T 3umt_A 170 LNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASSPPTFGGGTKLEIKRAA 247 (256)
T ss_dssp EEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEECSSSSCEECCCEEEEEC---
T ss_pred EEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEEEEEEEeeCCCcEECCCEEEEEECCC
Confidence 999984 22221 13456655566677899999999999999999998654322 23566776543
No 357
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=99.58 E-value=5.7e-15 Score=184.33 Aligned_cols=189 Identities=23% Similarity=0.268 Sum_probs=134.7
Q ss_pred cCCCCCcccEEeeeeCceEEEEecCCCCCCCCccceEEEeeeecCC--Cce---------EEecceeeeceEEEecCCCC
Q psy7042 900 DRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNS--TVW---------TKVSSYVTTPFVRVRNLAIG 968 (2245)
Q Consensus 900 ~~P~~p~~l~~~~~~~~~~~l~W~~p~~~~g~~i~~y~i~~~~~~~--~~~---------~~~~~~~~~~~~~i~~L~p~ 968 (2245)
.+|++|.++.. .++++++.|+|++|.+.+|..+.+|.|+++.... ..| .........+.++|.+|.|+
T Consensus 332 ~pPsaP~nl~~-~vs~tSv~LsW~pP~~~gG~~i~~Y~V~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~ts~tI~gL~P~ 410 (536)
T 3fl7_A 332 RPPSAPHYLTA-VGMGAKVELRWTPPQDSGGREDIVYSVTCEQCWPESGECGPCEASVRYSEPPHGLTRTSVTVSDLEPH 410 (536)
T ss_dssp CCCCCBSCEEE-ECCTTSEEEEECCBSCCCSCSCCEEEEEEEEECC-CCCEEECCTTCEESSCSSSBCSSEEEEECCCTT
T ss_pred cCCCcccceEE-EecCCEEEEEEeCCcCCCCCceeEEEEEEEeccCCCCcccccCCCceEEEeecCCccceeEeCCCCCC
Confidence 58999999954 6889999999999998888789999999986321 112 11222345788999999999
Q ss_pred ceeeEEEEEEeccccCCCccccCcccccCCCCCCCCCCCCeeEeecCCeEEEEecCCCCCCCCccceEEEEEEecCCccc
Q psy7042 969 STYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKW 1048 (2245)
Q Consensus 969 ~~y~~~v~a~n~~g~~~~s~~~~~~~~~t~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~ 1048 (2245)
+.|.|+|.|.|..|.+.++..+..+.+.+.+.. |..+.+...+.++|.|+|++|...+ ++|.+|.|.|+..++. .
T Consensus 411 T~Y~frV~A~N~~G~~sps~~s~~v~v~T~~~~---Ps~~~~~~~s~tSV~LsW~pP~~~n-g~I~~Y~V~y~~~~~~-~ 485 (536)
T 3fl7_A 411 MNYTFTVEARNGVSGLVTSRSFRTASVSINQTE---PPKVRLEGRSTTSLSVSWSIPPPQQ-SRVWKYEVTYRKKGDS-N 485 (536)
T ss_dssp CEEEEEEEEECTTGGGCSCCCEEEEEEECCSCC---CCEEEEEECCC-CCEEEEECCTTTT-TTCSEEEEEEEEC--C-C
T ss_pred CEEEEEEEEEecCCCCCCCCccceeEEeecccC---CCCCceeeccCCeEEEEEECCcCCC-CcccEEEEEEEECCCC-c
Confidence 999999999999997443333345566665444 4555567888999999999997554 4699999999876543 1
Q ss_pred eeccccccCCcceeEEEEeecccccCCccCchhhhhhhhhcccccccccccCCcEEEEEEEEEecCCCCCCCCCCccee
Q psy7042 1049 IKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSDIIM 1127 (2245)
Q Consensus 1049 ~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~v~A~n~~G~~~~s~~~~~~~ 1127 (2245)
. .. .++... +.++|.+|+|++.|.|+|+|.|..|.|++|....+.|
T Consensus 486 ~-~~--~v~~~~------------------------------ts~~l~gL~P~T~Y~frVrA~n~~G~Gp~S~~v~~~T 531 (536)
T 3fl7_A 486 S-YN--VRRTEG------------------------------FSVTLDDLAPDTTYLVQVQALTQEGQGAGSKVHEFQT 531 (536)
T ss_dssp C-CE--EEEESS------------------------------SEEECCSCCSSCEEEEEEEEECC---CEECCCEEEEC
T ss_pred e-EE--EEcCCC------------------------------CEEEECCCCCCCEEEEEEEEEcCCcccCCCCCEEEEe
Confidence 1 00 011111 1126999999999999999999999999887665544
No 358
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.58 E-value=1.7e-14 Score=168.17 Aligned_cols=170 Identities=15% Similarity=0.223 Sum_probs=126.8
Q ss_pred CceeccCCceEEcCCCeEEEEEEecCcCCCeEEEeeCCE-----e---------ccCCceEEEEecCcEEEEEEeeeccC
Q psy7042 1698 PDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGR-----E---------ISSGARYRVETAGGVFRLHFNEVTDV 1763 (2245)
Q Consensus 1698 p~~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~~~-----~---------l~~~~~~~~~~~~~~~~L~i~~v~~~ 1763 (2245)
+.+...+..+.+.+|++++|.|.+.+.|.+.+.|+|+.. . .....|+.+...+...+|.|.+++.+
T Consensus 5 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 84 (250)
T 3esu_F 5 IVLIQSTSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQE 84 (250)
T ss_dssp CCEECSCSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred eeEEecCCEEEeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCChh
Confidence 345566777889999999999999999999999998531 1 11235777777777889999999999
Q ss_pred CCeEEEEEEecCceeeE-EEEEEEecCC-------------------CccccCCCceEEcCCCeEEEEEEEeccC--CcE
Q psy7042 1764 DNGDYTCEAYNSVGFAH-TSSRVKIGTP-------------------PRIDRMPNALYIPEGDNTKVKIFYAGDQ--PME 1821 (2245)
Q Consensus 1764 d~G~Y~C~~~n~~g~~~-~~~~l~V~~~-------------------p~~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~ 1821 (2245)
|+|.|.|.+.|..+... ....|.|..+ +.+...+....+.+|++++|.|.+.+.+ .+.
T Consensus 85 D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~ 164 (250)
T 3esu_F 85 DIGTYFCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPELVKPGASVKISCKDSGYAFSSSW 164 (250)
T ss_dssp GCEEEEEEECSSSSCEECCCEEEEEC------------------------CEECCCEEECTTCCEEEEEECCSTTGGGSE
T ss_pred hCEEEEEEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCceEEcCCceEEEEEEecCCcccCCE
Confidence 99999999998755422 2346777653 2334455667899999999999999876 789
Q ss_pred EEEEEC--CEEee-----------------cCCceEEEEc--CCeEEEEEcccCcccceEEEEEEEc
Q psy7042 1822 VSLTKN--GRVVQ-----------------SDDRFKFTVL--DDYIIIFIKEIRKEDAGDYTVNLSN 1867 (2245)
Q Consensus 1822 v~W~~~--g~~l~-----------------~~~~~~~~~~--~~~~~l~i~~~~~~d~G~Y~C~a~n 1867 (2245)
+.|+|+ ++.+. ...++.+... .....|.|.++..+|+|.|+|.|.|
T Consensus 165 v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 165 MNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAVYFCARSG 231 (250)
T ss_dssp EEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred EEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCcccCEEEEEEEec
Confidence 999997 43321 1144444432 4556899999999999999999997
No 359
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.58 E-value=6.8e-15 Score=173.56 Aligned_cols=174 Identities=17% Similarity=0.202 Sum_probs=124.3
Q ss_pred CCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEE--CCeec------------cC----CCeEEEEEc-CcEEEEEE
Q psy7042 90 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLR--NGREI------------SS----GARYRVETA-GGVFRLHF 150 (2245)
Q Consensus 90 ~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~--~g~~l------------~~----~~~~~~~~~-~~~~~L~i 150 (2245)
.+.++.+|..+.+.+|++++|.|.+. .+.+.|.|+| .+..+ .. .+|+.+..+ ++..+|.|
T Consensus 26 ~~~v~~~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I 104 (268)
T 3pl6_D 26 GAGVSQTPSNKVTEKGKYVELRCDPI-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKI 104 (268)
T ss_dssp -SSCBCCCSEEEEETTCCEEEEEBCB-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEE
T ss_pred CceeEeCCCEEEecCCCCEEEEEEeC-CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEE
Confidence 56777888889999999999999986 5778899999 23221 11 157776652 34568999
Q ss_pred eeeccCCCeEEEEEEEcC--cccceeEEEEEecC------CCeee-cCCCceEEcCCCeEEEEEEEecCCCc--eEEEee
Q psy7042 151 NEVTDVDNGDYTCEAYNS--VGFAHTSSRVKIGT------PPRID-RMPNALYIPEGDNTKVKIFYAGDQPM--EVSLTK 219 (2245)
Q Consensus 151 ~~~~~~d~G~Y~C~a~n~--~g~~~~~~~l~V~~------~P~~~-~~~~~~~v~~G~~~~l~C~~~g~p~~--~i~W~~ 219 (2245)
.+++.+|+|.|.|.|.|. .+.......|.|.. +|.+. ..+....+.+|+.++|.|.+.|.|++ .|+|+|
T Consensus 105 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~~ 184 (268)
T 3pl6_D 105 QRTERGDSAVYLCATSALGDTQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWV 184 (268)
T ss_dssp CSCCGGGCEEEEEEEESSSSSCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE
T ss_pred CCCCcccCEEEEEEEecCCCceeeCCcEEEEEecCcccccCCceEEeCCCcccccCCCceEEEEEECcccCCCeEEEEEE
Confidence 999999999999999984 33333455677765 56544 34555667779999999999985544 899999
Q ss_pred CceeeecCCceEE---E-----EeC---CeEEEEEcccCccC-ceeEEEEEEcCCcc
Q psy7042 220 NGRVVQSDDRFKF---T-----VLD---DYIIIFIKEIRKED-AGDYTVNLSNSSGS 264 (2245)
Q Consensus 220 ~g~~l~~~~~~~~---~-----~~~---~~~~L~i~~~~~~d-~G~Y~C~a~n~~g~ 264 (2245)
||..+........ . ..+ ....|.|.....+| +|.|+|.|.|....
T Consensus 185 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~l~ 241 (268)
T 3pl6_D 185 NGKEVHSGVCTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLS 241 (268)
T ss_dssp SSSEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred CCEECCCCeEeccccccccccCCCCcEEEEEEEEEcHHHhccCCCEEEEEEEcCCCC
Confidence 9998864321100 0 001 11357888887777 99999999997643
No 360
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.58 E-value=1.3e-14 Score=168.66 Aligned_cols=172 Identities=15% Similarity=0.192 Sum_probs=122.3
Q ss_pred CcceEEeCCCeEEEEEEEee--ecCCceEEEECC--e---ec--------------cCCCeEEEEEc--CcEEEEEEeee
Q psy7042 97 LKDLVVPLGKLLTLQCEATG--TPVPKCRWLRNG--R---EI--------------SSGARYRVETA--GGVFRLHFNEV 153 (2245)
Q Consensus 97 ~~~~~v~~G~~v~L~C~~~g--~p~~~i~W~~~g--~---~l--------------~~~~~~~~~~~--~~~~~L~i~~~ 153 (2245)
+..+.+.+|++|+|.|.+.+ .+...+.|+|.. . .+ ...+|+.+..+ .+..+|+|.++
T Consensus 7 p~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (253)
T 3liz_H 7 SGGGLVQPGGSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQMSSL 86 (253)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEECSC
T ss_pred CCCEEECCCCcEEEEEEeeCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECCC
Confidence 45678999999999999976 345689999832 1 11 01246666543 35678999999
Q ss_pred ccCCCeEEEEEEEcCc----ccceeEEEEEec----CCCeeecCCCceEEcCCCeEEEEEEEec-CCCc-eEEEeeCcee
Q psy7042 154 TDVDNGDYTCEAYNSV----GFAHTSSRVKIG----TPPRIDRMPNALYIPEGDNTKVKIFYAG-DQPM-EVSLTKNGRV 223 (2245)
Q Consensus 154 ~~~d~G~Y~C~a~n~~----g~~~~~~~l~V~----~~P~~~~~~~~~~v~~G~~~~l~C~~~g-~p~~-~i~W~~~g~~ 223 (2245)
+.+|+|.|.|.+.+.. +.....+.|.|. .+|.+...+....+.+|+.++|.|.+.| .|.+ .++|+++|..
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~~~~ 166 (253)
T 3liz_H 87 KSEDTAMYYCTRDPAGRAWFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLS 166 (253)
T ss_dssp CGGGCEEEEEEECCBTTTBCCEECCCEEEEECSSCCBCCEEEEECC------CCEEEEEEEEEEEBSSCCEEEEGGGTBC
T ss_pred ChhhCEEEEEEEecCCcceeeEECCCEEEEEeccCCCCCeEEEecCCcccCCCCcEEEEEEEeeEeCCCeEEEEEeCCee
Confidence 9999999999999863 222334567776 4666665555556778999999999988 7766 8999999873
Q ss_pred ee--------cCCceEEEEeCCeEEEEEcccCccCceeEEEEEEcCCcceEEEEEEEEe
Q psy7042 224 VQ--------SDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINIT 274 (2245)
Q Consensus 224 l~--------~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 274 (2245)
+. ....+.+ .+.|.|.....+| |.|+|.|.|..+.....+.|.+.
T Consensus 167 ~~~~~~~~~~~~g~~~~-----~s~L~i~~~~~~d-g~ytC~v~~~~~~~~~~~~~~~~ 219 (253)
T 3liz_H 167 SGVHTFPAVLQSDLYTL-----SSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIVPR 219 (253)
T ss_dssp TTEEECCCEEETTEEEE-----EEEEEEETTSTTT-SCCEEEEEEGGGTEEEEEECCCC
T ss_pred cceEeCCccccCCeEEE-----EEEEEEcHHHCCC-ceEEEEEEECCCCcceEEEecCc
Confidence 21 1122221 1469999999999 99999999999888777777765
No 361
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.58 E-value=1.7e-14 Score=164.23 Aligned_cols=162 Identities=17% Similarity=0.245 Sum_probs=117.5
Q ss_pred CcceEEeCCCeEEEEEEEeeec--CCceEEEEC--Ceecc-------------------CCCeEEEEEc--CcEEEEEEe
Q psy7042 97 LKDLVVPLGKLLTLQCEATGTP--VPKCRWLRN--GREIS-------------------SGARYRVETA--GGVFRLHFN 151 (2245)
Q Consensus 97 ~~~~~v~~G~~v~L~C~~~g~p--~~~i~W~~~--g~~l~-------------------~~~~~~~~~~--~~~~~L~i~ 151 (2245)
|..+.+.+|++|+|.|.+.+.+ .+.|.|+|. +..+. ..+|+.+..+ .+.++|.|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 86 (221)
T 3m8o_H 7 SGGGLVQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQMN 86 (221)
T ss_dssp ESCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEEEC
T ss_pred cCCEEEcCCCCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEEEC
Confidence 4457799999999999998743 578999983 21110 1257777644 456789999
Q ss_pred eeccCCCeEEEEEEEcCc--ccceeEEEEEec----CCCeee-cCCCceEEcCCCeEEEEEEEec-CCC--ceEEEeeCc
Q psy7042 152 EVTDVDNGDYTCEAYNSV--GFAHTSSRVKIG----TPPRID-RMPNALYIPEGDNTKVKIFYAG-DQP--MEVSLTKNG 221 (2245)
Q Consensus 152 ~~~~~d~G~Y~C~a~n~~--g~~~~~~~l~V~----~~P~~~-~~~~~~~v~~G~~~~l~C~~~g-~p~--~~i~W~~~g 221 (2245)
+++.+|+|.|.|.|.+.. ......+.|.|. .+|.+. ..+... .+|+.++|.|.+.| .|. +.+.|+|+|
T Consensus 87 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~--~~g~~v~L~C~~~~~~P~~~~~v~W~~~g 164 (221)
T 3m8o_H 87 SLKSDDTAMYYCVIRGDVYNRQWGQGTLVTVSSASPTSPKVFPLSLCST--QPDGNVVIACLVQGFFPQEPLSVTWSESG 164 (221)
T ss_dssp SCCGGGCEEEEEEEESCTTCCCBBCCEEEEECSCCCBCCEEEEEECCSC--CCTTEEEEEEEEEEEBSSCSEEEEESCCS
T ss_pred CCCHHHCEEEEEEEECCChhheECCCEEEEEecCCCCCCeEEEecCccc--ccCCCEEEEEEEEeeECCCCEEEEEEECC
Confidence 999999999999999864 222334567775 245554 233333 78999999999988 775 489999999
Q ss_pred eeeec----------CCceEEEEeCCeEEEEEcccCccCceeEEEEEEcCCcce
Q psy7042 222 RVVQS----------DDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV 265 (2245)
Q Consensus 222 ~~l~~----------~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 265 (2245)
..+.. +..+.+ .+.|.|.....+|+|.|+|.|.|..+..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~-----~s~L~i~~~~~~d~g~ytC~v~~~~~~~ 213 (221)
T 3m8o_H 165 QGVTARNFPPSQDASGDLYTT-----SSQLTLPATQCLAGKSVTCHVKHYTNPS 213 (221)
T ss_dssp TTCEEEECCCEECSSSSCEEE-----EEEEEEEGGGSCTTCEEEEEEEETTSCC
T ss_pred EECceEEcCceeeCCCCcEEE-----EEEEEECHHHcCCCCeEEEEEEECCCCc
Confidence 87732 222222 1359999999999999999999987653
No 362
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.58 E-value=6.5e-15 Score=170.57 Aligned_cols=180 Identities=13% Similarity=0.180 Sum_probs=130.3
Q ss_pred CCceeccCCceEEcCCCeEEEEEEecCcCCCeEEEeeCC--Ee------------ccCCceEEEEecCcEEEEEEeeecc
Q psy7042 1697 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNG--RE------------ISSGARYRVETAGGVFRLHFNEVTD 1762 (2245)
Q Consensus 1697 ~p~~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~~--~~------------l~~~~~~~~~~~~~~~~L~i~~v~~ 1762 (2245)
.+.+...+..+.+.+|++++|.|.+.+.+.+.+.|+|++ .. .....|+.+...++..+|.|.+++.
T Consensus 24 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 103 (237)
T 3sob_L 24 DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQP 103 (237)
T ss_dssp CCCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred cceEEeCCCeEEEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCCh
Confidence 345566677789999999999999999888899999832 11 1124577777677888999999999
Q ss_pred CCCeEEEEEEecCceee-EEEEEEEe---cCCCccccCCCceEEcCCCeEEEEEEEecc-C-CcEEEEEECCEEeecCC-
Q psy7042 1763 VDNGDYTCEAYNSVGFA-HTSSRVKI---GTPPRIDRMPNALYIPEGDNTKVKIFYAGD-Q-PMEVSLTKNGRVVQSDD- 1835 (2245)
Q Consensus 1763 ~d~G~Y~C~~~n~~g~~-~~~~~l~V---~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p-~~~v~W~~~g~~l~~~~- 1835 (2245)
+|+|.|+|.+.+..+.. .....|.| ..+|.+...+....+.+|+.++|.|.+.+. | .+.++|+|+|..+....
T Consensus 104 ~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~~~~~~~ 183 (237)
T 3sob_L 104 EDFATYYCQQSYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQ 183 (237)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEEECCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEE
T ss_pred hhCeEEEEeeccCCceEEcCcEEEEEecCCCCCceEEeCCChhhccCCceEEEEEEcccCCCceEEEEEECCCCCCCcee
Confidence 99999999998876532 22345665 446666554444445568899999999984 4 58999999999886431
Q ss_pred c-eEEEEcCC-----eEEEEEcccCcccceEEEEEEEcCCeeeEEEE
Q psy7042 1836 R-FKFTVLDD-----YIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTF 1876 (2245)
Q Consensus 1836 ~-~~~~~~~~-----~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 1876 (2245)
. .......+ ...|.|.....+|.|.|+|.|.|.........
T Consensus 184 ~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~ 230 (237)
T 3sob_L 184 ESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTK 230 (237)
T ss_dssp EEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSCEEE
T ss_pred ecccccccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCCCceee
Confidence 0 00000111 24688999999999999999999876544333
No 363
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.58 E-value=3.7e-14 Score=166.01 Aligned_cols=185 Identities=16% Similarity=0.223 Sum_probs=130.3
Q ss_pred ccCCceEEcCCCeEEEEEEecCc--CCCeEEEeeCC--Ee---c-------------cCCceEEEEe--cCcEEEEEEee
Q psy7042 1702 VPLKDLVVPLGKLLTLQCEATGT--PVPKCRWLRNG--RE---I-------------SSGARYRVET--AGGVFRLHFNE 1759 (2245)
Q Consensus 1702 ~~~~~~~~~~G~~v~L~C~~~~~--p~~~v~W~~~~--~~---l-------------~~~~~~~~~~--~~~~~~L~i~~ 1759 (2245)
..+..+.+.+|++++|.|.+.+. +.+.+.|+|.. .. + ....|+.+.. .....+|.|.+
T Consensus 13 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 92 (257)
T 3gkz_A 13 QESGPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYLQLKS 92 (257)
T ss_dssp EEECCSEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEEEECS
T ss_pred ECCCCeEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEEEECC
Confidence 34556779999999999999874 47789999832 11 1 1124566554 34677899999
Q ss_pred eccCCCeEEEEEEecCc----eeeEEEEEEEecCC--------------CccccCCCceEEcCCCeEEEEEEEeccCCc-
Q psy7042 1760 VTDVDNGDYTCEAYNSV----GFAHTSSRVKIGTP--------------PRIDRMPNALYIPEGDNTKVKIFYAGDQPM- 1820 (2245)
Q Consensus 1760 v~~~d~G~Y~C~~~n~~----g~~~~~~~l~V~~~--------------p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~- 1820 (2245)
++.+|+|.|+|.+.|.. ........|.|..+ |.+...+....+.+|++++|.|.+.+.+.+
T Consensus 93 v~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~ 172 (257)
T 3gkz_A 93 VSSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMSASPGEKVTLTCSASSSVSSS 172 (257)
T ss_dssp CCGGGCEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSEEEECTTCCEEEEEEESSCCCGG
T ss_pred CChhhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCceEEEeCCCcEEEEEEEccCccce
Confidence 99999999999999862 22233456777654 566677778899999999999999998877
Q ss_pred EEEEEEC--CEEee------------cCCceEEEEcCCeEEEEEcccCcccceEEEEEEEcCCeeeE-EEEEEEEeCCCC
Q psy7042 1821 EVSLTKN--GRVVQ------------SDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVS-GTFTINITGLPG 1885 (2245)
Q Consensus 1821 ~v~W~~~--g~~l~------------~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~-~~~~l~v~~~p~ 1885 (2245)
.+.|+|+ +..+. ...++..........|.|.++..+|+|.|+|.|.|.....- .-..|.|...+.
T Consensus 173 ~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~l~v~~~~~ 252 (257)
T 3gkz_A 173 HLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAASYFCHQWSSFPFTFGSGTKLEIKRAPH 252 (257)
T ss_dssp GEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECCC--
T ss_pred EEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCChHHCEEEEEEEccCCceEEcCCEEEEEEeCCC
Confidence 9999983 33221 12455555556667899999999999999999988543221 124566655443
Q ss_pred C
Q psy7042 1886 P 1886 (2245)
Q Consensus 1886 ~ 1886 (2245)
.
T Consensus 253 ~ 253 (257)
T 3gkz_A 253 H 253 (257)
T ss_dssp -
T ss_pred C
Confidence 3
No 364
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.58 E-value=1e-14 Score=168.71 Aligned_cols=169 Identities=15% Similarity=0.254 Sum_probs=123.1
Q ss_pred eeccCCceEEcCCCeEEEEEEecCcCCCeEEEeeC--CEec---------------cCCceEEEEe-cCcEEEEEEeeec
Q psy7042 1700 FIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRN--GREI---------------SSGARYRVET-AGGVFRLHFNEVT 1761 (2245)
Q Consensus 1700 ~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~--~~~l---------------~~~~~~~~~~-~~~~~~L~i~~v~ 1761 (2245)
+...+..+.+.+|++++|.|. .+.|.+.+.|+|+ +..+ ....|+.+.. .....+|+|.+++
T Consensus 3 v~q~p~~~~v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~ 81 (238)
T 2p1y_A 3 VTQSPRNKVAVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELAT 81 (238)
T ss_dssp EEEECSEEEEETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCC
T ss_pred ceECccceEEeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCC
Confidence 445567789999999999999 6778889999995 2111 1124555543 3345679999999
Q ss_pred cCCCeEEEEEEecCceee-----EEEEEEEecCCC------------ccccCCCceEEcCCCeEEEEEEEeccCCcEEEE
Q psy7042 1762 DVDNGDYTCEAYNSVGFA-----HTSSRVKIGTPP------------RIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSL 1824 (2245)
Q Consensus 1762 ~~d~G~Y~C~~~n~~g~~-----~~~~~l~V~~~p------------~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~v~W 1824 (2245)
.+|+|.|+|.+.|..|.. .....|.|...+ .+...+....+.+|++++|.|.+.+.|.+.+.|
T Consensus 82 ~~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W 161 (238)
T 2p1y_A 82 PSQTSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTVWEGETAILNCSYENSAFDYFPW 161 (238)
T ss_dssp GGGCEEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSEEEEETTSCEEEEEECCCTTCCEEEE
T ss_pred cccCeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCceEEEeCCCeEEEEEEEecCCCCcEEE
Confidence 999999999999876521 123567776543 455567778899999999999999999999999
Q ss_pred EECC-----EEe---------ecCCceEEEE--cCCeEEEEEcccCcccceEEEEEEEcCC
Q psy7042 1825 TKNG-----RVV---------QSDDRFKFTV--LDDYIIIFIKEIRKEDAGDYTVNLSNSS 1869 (2245)
Q Consensus 1825 ~~~g-----~~l---------~~~~~~~~~~--~~~~~~l~i~~~~~~d~G~Y~C~a~n~~ 1869 (2245)
+|++ ..+ ....++.+.. ......|.|.++..+|+|.|+|.|.|..
T Consensus 162 ~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 162 YQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAIDTN 222 (238)
T ss_dssp EEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEEEEEEEETT
T ss_pred EEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEEEEEEeeCC
Confidence 9963 111 1234444432 2345789999999999999999999974
No 365
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.58 E-value=1.3e-14 Score=168.38 Aligned_cols=169 Identities=11% Similarity=0.138 Sum_probs=118.2
Q ss_pred CCcceEEeCCCeEEEEEEEeeec--CCceEEEECC--eecc-----------------CCCeEEEEEc--CcEEEEEEee
Q psy7042 96 PLKDLVVPLGKLLTLQCEATGTP--VPKCRWLRNG--REIS-----------------SGARYRVETA--GGVFRLHFNE 152 (2245)
Q Consensus 96 ~~~~~~v~~G~~v~L~C~~~g~p--~~~i~W~~~g--~~l~-----------------~~~~~~~~~~--~~~~~L~i~~ 152 (2245)
.|..+.+.+|++|+|.|.+.+.| .+.|.|+|+. ..+. ...|+.+..+ .+..+|.|.+
T Consensus 12 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 91 (261)
T 2xqy_G 12 QPGAELVKPGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLSS 91 (261)
T ss_dssp CCSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECS
T ss_pred CCCCEEEcCCCCEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEcC
Confidence 35677899999999999998876 6789999863 2110 1347777653 3567899999
Q ss_pred eccCCCeEEEEEEEcCccc---ceeEEEEEecC----CCeeecCCCceEEcCCCeEEEEEEEecC-CCc-eEEEeeCcee
Q psy7042 153 VTDVDNGDYTCEAYNSVGF---AHTSSRVKIGT----PPRIDRMPNALYIPEGDNTKVKIFYAGD-QPM-EVSLTKNGRV 223 (2245)
Q Consensus 153 ~~~~d~G~Y~C~a~n~~g~---~~~~~~l~V~~----~P~~~~~~~~~~v~~G~~~~l~C~~~g~-p~~-~i~W~~~g~~ 223 (2245)
++.+|+|.|.|.|.|..+. ....+.|.|.. +|.+...+....+.+|+.++|.|.+.|. |.+ .|.|+|++..
T Consensus 92 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~v~~g~~v~L~C~~~g~~P~~i~v~W~k~g~~ 171 (261)
T 2xqy_G 92 LTSEDSAVYYCGRLGYVYGFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLS 171 (261)
T ss_dssp CCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCCC--CCSEEEEEEEEEEEBSSCCEEEEGGGTCC
T ss_pred CCcccCeEEEEEEecCCCcceEECCCEEEEEccCCCCCCeEEEeCCCccccCCCcEEEEEEEEeEeCCCCEEEEecCCCc
Confidence 9999999999999986431 11345788875 4655543333346789999999999874 766 9999999876
Q ss_pred eecCCceEEEEeC---CeEEEEEcccCccCceeEEEEEEcCCcce
Q psy7042 224 VQSDDRFKFTVLD---DYIIIFIKEIRKEDAGDYTVNLSNSSGSV 265 (2245)
Q Consensus 224 l~~~~~~~~~~~~---~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 265 (2245)
+.......+...+ ....|.|.++..+| |.|+|.|.|.....
T Consensus 172 ~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~YtC~v~n~~~~~ 215 (261)
T 2xqy_G 172 SGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASST 215 (261)
T ss_dssp TTEEECCCEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTE
T ss_pred CceEecCceecCCcEEEEEEEEEeccccCC-CEEEEEEEECCCCc
Confidence 5211000011111 12469999988888 99999999976553
No 366
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.57 E-value=8.5e-15 Score=173.29 Aligned_cols=183 Identities=19% Similarity=0.259 Sum_probs=126.7
Q ss_pred CCceeccCCceEEcCCCeEEEEEEec---CcCCCeEEEeeCCEeccCC------------------ceEEEEe--cCcEE
Q psy7042 1697 KPDFIVPLKDLVVPLGKLLTLQCEAT---GTPVPKCRWLRNGREISSG------------------ARYRVET--AGGVF 1753 (2245)
Q Consensus 1697 ~p~~~~~~~~~~~~~G~~v~L~C~~~---~~p~~~v~W~~~~~~l~~~------------------~~~~~~~--~~~~~ 1753 (2245)
.+.+..++..+.+.+|++++|.|.+. +.+.+.+.|++++...... .|+.+.. ..+..
T Consensus 5 ~~~v~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 84 (268)
T 3mj6_A 5 LPGLTVSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDG 84 (268)
T ss_dssp -------CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBC
T ss_pred ccccccCCCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEE
Confidence 34555666778999999999999997 6778889999965432111 2333311 12335
Q ss_pred EEEEeeeccCCCeEEEEEEecCceee--EEEEEEEecCCCccccCCCceEEcCCCeEEEEEEE---eccCCcEEEEEEC-
Q psy7042 1754 RLHFNEVTDVDNGDYTCEAYNSVGFA--HTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFY---AGDQPMEVSLTKN- 1827 (2245)
Q Consensus 1754 ~L~i~~v~~~d~G~Y~C~~~n~~g~~--~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~---~~~p~~~v~W~~~- 1827 (2245)
+|.|.+++.+|+|.|+|.+.|..+.. ...+.|.|. | ..+....+.+|+++.|.|.+ .+.|.+.+.|+++
T Consensus 85 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~--~---~~p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~ 159 (268)
T 3mj6_A 85 SLLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVL--P---EEPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSS 159 (268)
T ss_dssp CEEECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEE--C---CCCSEEEEETTCCEEECCBCEESSSSCCCEEEEEEEC
T ss_pred EEEECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEe--c---cCCCccccccCCcEEEEEEecCCCCCCccceEEEecC
Confidence 69999999999999999999876544 334555553 2 23457789999999999999 5678999999993
Q ss_pred CEEeec-----------------CCce--EEEE----cCCeEEEEEcccCcccceEEEEEEEcCCeeeEEEEEEEEeCCC
Q psy7042 1828 GRVVQS-----------------DDRF--KFTV----LDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLP 1884 (2245)
Q Consensus 1828 g~~l~~-----------------~~~~--~~~~----~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p 1884 (2245)
+..+.. ..++ .+.. ......|.|.++..+|+|.|+|.|.|..|.....+.|.|...|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~ 239 (268)
T 3mj6_A 160 GSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHVVQDE 239 (268)
T ss_dssp TTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC-
T ss_pred CCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCceEEEEEEEEEEcCC
Confidence 321100 0000 0111 1234589999999999999999999999999999999986544
No 367
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.57 E-value=1.1e-14 Score=167.68 Aligned_cols=168 Identities=13% Similarity=0.161 Sum_probs=104.0
Q ss_pred CcceEEeCCCeEEEEEEEeeec--CCceEEEECC--eecc-----------------CCCeEEEEEc--CcEEEEEEeee
Q psy7042 97 LKDLVVPLGKLLTLQCEATGTP--VPKCRWLRNG--REIS-----------------SGARYRVETA--GGVFRLHFNEV 153 (2245)
Q Consensus 97 ~~~~~v~~G~~v~L~C~~~g~p--~~~i~W~~~g--~~l~-----------------~~~~~~~~~~--~~~~~L~i~~~ 153 (2245)
|..+.+.+|++|+|.|.+.+.+ .+.|.|+|.+ ..+. ..+|+.+..+ ++..+|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (257)
T 3bn9_D 7 SGGGLVKPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMSSL 86 (257)
T ss_dssp ECCEEECTTCEEEEEEEEESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEESC
T ss_pred cCCEEEcCCCcEEEEEEeccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEECCC
Confidence 3456789999999999998765 5789999843 2110 1347777654 45678999999
Q ss_pred ccCCCeEEEEEEEcCccc-------------ceeEEEEEecC----CCeeecCCCceEEcCCCeEEEEEEEecC-CCc-e
Q psy7042 154 TDVDNGDYTCEAYNSVGF-------------AHTSSRVKIGT----PPRIDRMPNALYIPEGDNTKVKIFYAGD-QPM-E 214 (2245)
Q Consensus 154 ~~~d~G~Y~C~a~n~~g~-------------~~~~~~l~V~~----~P~~~~~~~~~~v~~G~~~~l~C~~~g~-p~~-~ 214 (2245)
+.+|+|.|.|.+.+..|. ....+.|.|.. +|.+...+....+.+|+.++|.|.+.|. |.+ .
T Consensus 87 ~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~~~~~P~v~~~~p~~~~~~g~~v~L~C~~~g~~P~pi~ 166 (257)
T 3bn9_D 87 RAEDTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVT 166 (257)
T ss_dssp CGGGCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSSCCBCCEECCCCC-----------CCCEEEEEBSSCCE
T ss_pred ChhhCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCCCCcCCcEEEecCcccccCCCcEEEEEEEeeEECCCcE
Confidence 999999999999987651 11235788875 5666554433456789999999999885 776 9
Q ss_pred EEEeeCceeeecCCceEEEEeCC----eEEEEEcccCccCceeEEEEEEcCCcce
Q psy7042 215 VSLTKNGRVVQSDDRFKFTVLDD----YIIIFIKEIRKEDAGDYTVNLSNSSGSV 265 (2245)
Q Consensus 215 i~W~~~g~~l~~~~~~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 265 (2245)
|+|+|+|..+.......+...++ ...|.|.++..+| |.|+|.|.|.....
T Consensus 167 v~W~k~g~~~~~~~~~~~~~~~g~y~~~s~L~I~~~~~~~-g~YtC~v~n~~~~~ 220 (257)
T 3bn9_D 167 VSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNT 220 (257)
T ss_dssp EEETTTTCCSSCEECCCEECTTSCEEEEEECCCC--------CEEEEEEEGGGTE
T ss_pred EEEeeCCCcCCcEecCCeEcCCCCEEEEEEEEEcccccCC-CeEEEEEEecCCCc
Confidence 99999998642110000111111 2358888888778 99999999976443
No 368
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.57 E-value=1.5e-14 Score=163.54 Aligned_cols=171 Identities=12% Similarity=0.168 Sum_probs=116.2
Q ss_pred CcceEEeCCCeEEEEEEEeeec--CCceEEEECC--eecc----------------CCCeEEEEEc--CcEEEEEEeeec
Q psy7042 97 LKDLVVPLGKLLTLQCEATGTP--VPKCRWLRNG--REIS----------------SGARYRVETA--GGVFRLHFNEVT 154 (2245)
Q Consensus 97 ~~~~~v~~G~~v~L~C~~~g~p--~~~i~W~~~g--~~l~----------------~~~~~~~~~~--~~~~~L~i~~~~ 154 (2245)
|..+.+.+|++++|.|.+.+.| .+.|.|+|++ ..+. ..+|+.+..+ ++..+|.|.+++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 86 (215)
T 1c5d_H 7 SGPGLVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSLQ 86 (215)
T ss_dssp ECCCEECTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSCC
T ss_pred CCCeeecCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCCC
Confidence 4567889999999999998765 4789999852 2210 1347777643 356789999999
Q ss_pred cCCCeEEEEEEEcCccc---ceeEEEEEecC----CCeeecCCCceEEcCCCeEEEEEEEecC-CCc-eEEEeeCceeee
Q psy7042 155 DVDNGDYTCEAYNSVGF---AHTSSRVKIGT----PPRIDRMPNALYIPEGDNTKVKIFYAGD-QPM-EVSLTKNGRVVQ 225 (2245)
Q Consensus 155 ~~d~G~Y~C~a~n~~g~---~~~~~~l~V~~----~P~~~~~~~~~~v~~G~~~~l~C~~~g~-p~~-~i~W~~~g~~l~ 225 (2245)
.+|+|.|.|.|.|..+. ....+.|.|.. +|.+...+....+.+|+.++|.|.+.|. |.+ .|+|+++|..+.
T Consensus 87 ~~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~ 166 (215)
T 1c5d_H 87 TEDTAIYFCTREDGWNYFDYWGPGTMVTVSSAQTTAPSVYPLAPGCGDTTSSTVTLGCLVKGYFPEPVTVTWNSGALSSD 166 (215)
T ss_dssp GGGCEEEEEEECCSSSCSCCBCCCEEEEECSSCCBCCCEEEECCCSSCCCCSSEEEEEEEEEEBSSCCEEEEGGGTTCCS
T ss_pred cccCEEEEEEEecCCcccceEcCCEEEEecCCCCCCCeEEeccCChhhccCCcEEEEEEEeeeEcCCcEEEEccCCccCc
Confidence 99999999999987532 22346788873 4555543333346789999999999886 877 999999987643
Q ss_pred cCCceEEEEeCCeEEE--EEcccCccCceeEEEEEEcCCcceEEEE
Q psy7042 226 SDDRFKFTVLDDYIII--FIKEIRKEDAGDYTVNLSNSSGSVSGTF 269 (2245)
Q Consensus 226 ~~~~~~~~~~~~~~~L--~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 269 (2245)
........ .++...+ .+.....+| |.|+|.|.|..+......
T Consensus 167 ~~~~~~~~-~~g~~~~~s~L~~~~~~~-g~ytC~v~n~~~~~~~~~ 210 (215)
T 1c5d_H 167 VHTFPAVL-QSGLYTLTSSVTSSTWPS-QTVTCNVAHPASSTKVDK 210 (215)
T ss_dssp CCBCCCEE-ETTEEEEEEEEEESSTTT-SCCEEEEEEGGGTEEEEE
T ss_pred eEecCccc-CCCCEEEEEEEecccCCC-CeEEEEEEeCCCCccEEE
Confidence 21111111 1121111 122444456 999999999988754433
No 369
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.57 E-value=2e-15 Score=172.33 Aligned_cols=172 Identities=13% Similarity=0.151 Sum_probs=116.0
Q ss_pred ceecCCcceE-EeCCCeEEEEEEEeee---cCC-ceEEEECCeeccCCCeE-EEEEcC----cEEEEEEeeeccCCCeEE
Q psy7042 92 DFIVPLKDLV-VPLGKLLTLQCEATGT---PVP-KCRWLRNGREISSGARY-RVETAG----GVFRLHFNEVTDVDNGDY 161 (2245)
Q Consensus 92 ~~~~~~~~~~-v~~G~~v~L~C~~~g~---p~~-~i~W~~~g~~l~~~~~~-~~~~~~----~~~~L~i~~~~~~d~G~Y 161 (2245)
.++.++.... +.+|+.++|.|.+.|. |.+ .|.|+|++..+...... .....+ ....|.|.+++.+|+|.|
T Consensus 18 v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y 97 (239)
T 1i1c_A 18 VFIFPPKTKDVLGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLNGKTF 97 (239)
T ss_dssp EEEECCCHHHHTTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCE
T ss_pred EEEECCChHHhcccCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHccCCCeE
Confidence 3444555444 7899999999999987 766 89999998766532110 001111 234699999999999999
Q ss_pred EEEEEcCcccceeEEEE----EecCCCeeecCCCceEEcCCCeEEEEEEEec-CCC-ceEEEeeCceeeecCCceEE--E
Q psy7042 162 TCEAYNSVGFAHTSSRV----KIGTPPRIDRMPNALYIPEGDNTKVKIFYAG-DQP-MEVSLTKNGRVVQSDDRFKF--T 233 (2245)
Q Consensus 162 ~C~a~n~~g~~~~~~~l----~V~~~P~~~~~~~~~~v~~G~~~~l~C~~~g-~p~-~~i~W~~~g~~l~~~~~~~~--~ 233 (2245)
+|.|.|..+.......+ .+..+|.+...+.......|+.++|.|.+.| +|+ ..|+|+|||..+........ .
T Consensus 98 ~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~ 177 (239)
T 1i1c_A 98 KCKVNSGAFPAPIEKSISKPEGTPRGPQVYTMAPPKEEMTQSQVSITCMVKGFYPPDIYTEWKMNGQPQENYKNTPPTMD 177 (239)
T ss_dssp EEEEECSSSSSCEEEEECCCSSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEEC
T ss_pred EEEEecccCCCCcEEEEecCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeeeECCCeEEEEEECCEECCCceecCceEC
Confidence 99999988865333233 4566788766554433345889999999998 554 48999999998753221111 1
Q ss_pred EeCCe---EEEEEcccCccCceeEEEEEEcCCc
Q psy7042 234 VLDDY---IIIFIKEIRKEDAGDYTVNLSNSSG 263 (2245)
Q Consensus 234 ~~~~~---~~L~i~~~~~~d~G~Y~C~a~n~~g 263 (2245)
.++.. ..|.|.....+|.|.|+|.|.|..-
T Consensus 178 ~dgt~~~~s~l~v~~~~~~~~g~YtC~v~n~~l 210 (239)
T 1i1c_A 178 TDGSYFLYSKLNVKKETWQQGNTFTCSVLHEGL 210 (239)
T ss_dssp TTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred CCCCEEEEEEEEEChhhcCCCCEEEEEEECCCC
Confidence 11211 2355555555679999999999863
No 370
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.57 E-value=9.9e-15 Score=166.88 Aligned_cols=178 Identities=15% Similarity=0.268 Sum_probs=126.7
Q ss_pred ccccccccceeeEEEEeccCc-----CeEEEEeCCeec-------------CCCccEEEEee---CCeEEEEEecccccC
Q psy7042 489 NANAIQNHNAQFQCTITGCPK-----PTISWLKGSREI-------------TPSARHHIFAE---GDTYTLIINSVYGVD 547 (2245)
Q Consensus 489 ~~~~~~g~~~~l~C~~~g~p~-----~~v~W~~~~~~i-------------~~~~~~~~~~~---~~~~~L~i~~v~~~d 547 (2245)
.+.+.+|+++.|.|.+.+.|. +.+.|++++... ....+..+..+ .+...|.|.+++.+|
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~D 83 (222)
T 4i0k_A 4 PVVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVTD 83 (222)
T ss_dssp CCCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGGG
T ss_pred CEEEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCccccc
Confidence 456789999999999988764 789999987443 11233333221 124479999999999
Q ss_pred CceEEEEEEeCCCCCCcceeEeEecCCC---CCCCCCcccceEeeCCCeEEEEEee-eecCCCeEEEEe-CCeEeeccCe
Q psy7042 548 ADEYVCRAVNKGGVKSTKAELIIMTAPK---FNVPPRFRDTAYFDKGENVVVKIPF-TGYPKPKITWYR-DNEVIESGGH 622 (2245)
Q Consensus 548 ~G~Y~C~a~n~~g~~~~~~~l~v~~~p~---~~~~p~~~~~~~~~~g~~~~l~C~~-~g~p~~~i~W~~-~~~~~~~~~~ 622 (2245)
+|.|+|.+.|. +.....+.|.|..++. +...+ ...+..|+.++|.|.+ .+.|.+.+.|++ ++..+.....
T Consensus 84 ~G~Y~C~~~~~-~~~~~~~~l~V~~~~~~p~i~~~~----~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~~~~ 158 (222)
T 4i0k_A 84 EGSYTCFVSIQ-DFDSAAVSLQVAAPYSKPSMTLEP----NKDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGNVT 158 (222)
T ss_dssp CSCEEEEEEEC-CCCCCCCCCCCCBCCCCCEEECCC---------CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCSEEE
T ss_pred CEEEEEEEEeC-CCceEEEEEEEEcCCCCCcEEeCC----CceecCCceEEEEEecccccCCCeEEEEcCCCccCCCCcc
Confidence 99999999986 4556667777776532 22222 2346789999999999 899999999999 4555443333
Q ss_pred EEEEec--CCeEEEEEcCCCCCcCEEEEEEEEeCCCCceeEEEEEeeCCCC
Q psy7042 623 FHVETS--ERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPD 671 (2245)
Q Consensus 623 ~~~~~~--~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~P~ 671 (2245)
...... +....|.|.++...|.|.|+|.|.|..|.....+.|.|.++|-
T Consensus 159 ~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~ 209 (222)
T 4i0k_A 159 TSQMANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITGQPL 209 (222)
T ss_dssp EEEEECTTSCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCC---
T ss_pred eeEEcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEEEEEEeCCcc
Confidence 222222 2234588999999999999999999999999999999988774
No 371
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.57 E-value=2.8e-15 Score=171.10 Aligned_cols=173 Identities=13% Similarity=0.128 Sum_probs=118.9
Q ss_pred CCce-ecCCcceEEeCCCeEEEEEEEeee-cC-C-ceEEEECCeec-cCCCeEEEEEcCc----EEEEEEeeeccCCCeE
Q psy7042 90 KPDF-IVPLKDLVVPLGKLLTLQCEATGT-PV-P-KCRWLRNGREI-SSGARYRVETAGG----VFRLHFNEVTDVDNGD 160 (2245)
Q Consensus 90 ~P~~-~~~~~~~~v~~G~~v~L~C~~~g~-p~-~-~i~W~~~g~~l-~~~~~~~~~~~~~----~~~L~i~~~~~~d~G~ 160 (2245)
+|.+ ..+|....+.+|+.++|.|.+.|. |. | .|.|+|+|..+ ...........++ ...|.|.+++.+|+|.
T Consensus 12 ~P~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~~~~~~~~~~g~~~~~s~L~I~~~~~~D~g~ 91 (231)
T 2w59_A 12 PIQLYAIPPSPGELYISLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPDPMVLQEHFNGTYSASSAVPVSTQDWLSGER 91 (231)
T ss_dssp CCEEEEECCCHHHHHTSCCCEEEEEEEEESCCTTCEEEEECSSSSCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCC
T ss_pred CCEEEEeCcChhhcccCCceEEEEEEeCccCCCCeEEEEEcCCeeccccccccceECCCCcEEEEEEEEecchhccCCCE
Confidence 4554 356777778899999999999985 64 4 99999999887 3322222121222 2369999999999999
Q ss_pred EEEEEEcCcccceeEEEEEec----CCCeeecC-CCceEEcCCCeEEEEEEEecC-C-CceEEEeeCceeeecCCceE--
Q psy7042 161 YTCEAYNSVGFAHTSSRVKIG----TPPRIDRM-PNALYIPEGDNTKVKIFYAGD-Q-PMEVSLTKNGRVVQSDDRFK-- 231 (2245)
Q Consensus 161 Y~C~a~n~~g~~~~~~~l~V~----~~P~~~~~-~~~~~v~~G~~~~l~C~~~g~-p-~~~i~W~~~g~~l~~~~~~~-- 231 (2245)
|+|.|.|..+.......|.+. .+|.+... +....+ .|..++|.|.+.|. | .+.|+|+|||..+.......
T Consensus 92 Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~~~~~-~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~ 170 (231)
T 2w59_A 92 FTCTVQHEELPLPLSKSVYRNTGPTTPPLIYPFAPHPEEL-SLSRVTLSCLVRGFRPRDIEIRWLRDHRAVPATEFVTTA 170 (231)
T ss_dssp EEEEEECTTCSSCEEEEECCCCSCCBCCEEEEECCCGGGG-GSSEEEEEEEEEEEBSSCCEEEEEETTEECCGGGCEECC
T ss_pred EEEEEEcCCCCCceEEEEecCCCCCcCCEEEEeCCCHHHh-ccCceEEEEEEEeccCCCcEEEEEECCEECCCcccccCc
Confidence 999999987654333333322 46665443 322222 35679999999985 4 37999999999986543111
Q ss_pred -EE---------Ee-CC---eEEEEEcccCccCceeEEEEEEcCCc
Q psy7042 232 -FT---------VL-DD---YIIIFIKEIRKEDAGDYTVNLSNSSG 263 (2245)
Q Consensus 232 -~~---------~~-~~---~~~L~i~~~~~~d~G~Y~C~a~n~~g 263 (2245)
.. .+ +. .+.|.|.....+|.|.|+|.|.|...
T Consensus 171 ~~~~~~~~~~~~~d~gt~~~~s~L~i~~~~~~~~g~YtC~v~n~~l 216 (231)
T 2w59_A 171 VLPEERTANGAGGDGDTFFVYSKMSVETAKWNGGTVFACMAVHEAL 216 (231)
T ss_dssp CEECCTTSCC---CCCCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred cccCcccccccCCCCCeEEEEEEEEEeHHHcCCCCcEEEEEEcCCC
Confidence 11 11 11 24688888888899999999999864
No 372
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.57 E-value=1.3e-14 Score=162.72 Aligned_cols=167 Identities=13% Similarity=0.193 Sum_probs=119.3
Q ss_pred ceEEcCCCeEEEEEEec----CcCCCeEEEeeCCEeccC------------CceEEEEecCcEEEEEEeeeccCCCeEEE
Q psy7042 1706 DLVVPLGKLLTLQCEAT----GTPVPKCRWLRNGREISS------------GARYRVETAGGVFRLHFNEVTDVDNGDYT 1769 (2245)
Q Consensus 1706 ~~~~~~G~~v~L~C~~~----~~p~~~v~W~~~~~~l~~------------~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 1769 (2245)
.+.+.+|++++|.|.+. +.|.+.+.|++++..+.. ..|..+.. .+..+|.|.+++.+|+|.|+
T Consensus 3 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~~-~~~~~L~I~~v~~~D~G~Y~ 81 (201)
T 1dr9_A 3 HVTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDI-TNNLSIVILALRPSDEGTYE 81 (201)
T ss_dssp EEEEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEES-TTTTEEEECSCCGGGCEEEE
T ss_pred eEEEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEcc-CCCcEEEEecccchhCeEEE
Confidence 46788999999999995 446778999999987620 12333322 23346999999999999999
Q ss_pred EEEecCceee-----EEEEEEEecCC---CccccCCCceEEcCCCeEEEEEEEe-ccCCcEEEEEECCEEeecCCceEEE
Q psy7042 1770 CEAYNSVGFA-----HTSSRVKIGTP---PRIDRMPNALYIPEGDNTKVKIFYA-GDQPMEVSLTKNGRVVQSDDRFKFT 1840 (2245)
Q Consensus 1770 C~~~n~~g~~-----~~~~~l~V~~~---p~~~~~~~~~~~~~g~~~~l~C~~~-~~p~~~v~W~~~g~~l~~~~~~~~~ 1840 (2245)
|.+.|..|.. ...+.|.|..+ |.+.. .....|+.+.|.|.+. |.|.|.|+|+++|+.+..... ...
T Consensus 82 C~~~~~~g~~~~~~~~~~~~l~V~~~~~~p~~~~----~~~~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~~~~-~~~ 156 (201)
T 1dr9_A 82 CVVLKYEKDAFKREHLAEVTLSVKADFPTPSISD----FEIPTSNIRRIICSTSGGFPEPHLSWLENGEELNAINT-TVS 156 (201)
T ss_dssp EEEEECCTTSCEEEEEEEEEEEEECCCCCCEEEE----EECSSTTEEEEEEEEEEESSCEEEEEEESSCEECCSEE-EEE
T ss_pred EEEEcCCCCccccccccEEEEEEcCCCCCCceEe----ccCCCCCeEEEEEecCCccCCCEEEEEECCEECccccc-eEE
Confidence 9999976543 35667777665 22221 1124588999999995 899999999999998865422 222
Q ss_pred EcC--Ce-EEEEEcccCcccceEEEEEEEcCCeeeEEEEEE
Q psy7042 1841 VLD--DY-IIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTI 1878 (2245)
Q Consensus 1841 ~~~--~~-~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 1878 (2245)
... .. ....+..+..+|.|.|+|.|.|..|..+..+.+
T Consensus 157 ~~~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~~s~~~~~ 197 (201)
T 1dr9_A 157 QDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQTFNW 197 (201)
T ss_dssp ECTTTCCEEEEEEEEEETTSCEEEEEEEEETTCCEEEEEEE
T ss_pred ecCCCcEEEEEEEEEEEecCCCEEEEEEecCcceeeeEEec
Confidence 222 21 222345566789999999999999988877654
No 373
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=99.56 E-value=3.6e-14 Score=158.14 Aligned_cols=174 Identities=25% Similarity=0.377 Sum_probs=135.8
Q ss_pred eCCCCCCCCCeeeeecCCcEEEEeeCCCCCCCcccccEEEEeeeCCCCCeEE--EceeeeeeEEEecCCCCCEEEEEEEE
Q psy7042 667 SDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIR--VGNTRFTTMAITGLSPGHQYEFRVYA 744 (2245)
Q Consensus 667 ~~~P~~p~~~~~~~~~~~si~lsW~~p~~~~~~~~~~y~v~~~~~~~~~w~~--~~~~~~~~~~i~~L~p~t~y~~~v~a 744 (2245)
...| +|.++.+..++.+++.|+|.+|. +..+.+|.|+|+......+.. ........+.+.+|.|++.|.|+|.|
T Consensus 21 ~~~P-~P~~l~~~~~~~~sv~lsW~~p~---~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a 96 (203)
T 2gee_A 21 MEVP-QPTDLSFVDITDSSIGLRWTPLN---SSTIIGYRITVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVYT 96 (203)
T ss_dssp SCCC-CCEEEEEECCTTTCEEEEEECCS---SSSCCEEEEEEEESSSSSCCEEEEEETTCCEEEECSCCTTCEEEEEEEE
T ss_pred ccCc-CCCccEEEecCCCEEEEEecCCC---CCCccEEEEEEEECCCCCCceeEEcCCCccEEEeCCCCCCCEEEEEEEE
Confidence 3556 78899999999999999999764 347899999999866554322 22334578999999999999999999
Q ss_pred EecccCCCCCCCCccEEecCccccccccccccccCCCceeecccccccccCCceEEEEeeeccCccccccccceeccccc
Q psy7042 745 ENVYGRSDPSTTSDLITTKDTFKKQIKKRQYDFDETGKKIRGKADEKVSDYDQYVFDIYSKYVPQPVDIKTSSVYDHYDI 824 (2245)
Q Consensus 745 ~n~~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 824 (2245)
.|..|.+.++. +
T Consensus 97 ~~~~g~s~~~~---~----------------------------------------------------------------- 108 (203)
T 2gee_A 97 VKNGGESTPTT---L----------------------------------------------------------------- 108 (203)
T ss_dssp ESSSCBCCCEE---E-----------------------------------------------------------------
T ss_pred EeCCCccccEe---e-----------------------------------------------------------------
Confidence 99877643221 0
Q ss_pred ccccccCceeEEEEeeecccCCeeEEEeeccCCchhhhhhheeeeeeeccCCCceEeecccccCCcceEEEEEEecCCCC
Q psy7042 825 LEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFEVLDRPHP 904 (2245)
Q Consensus 825 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ 904 (2245)
.+...+| +
T Consensus 109 -----------------------------------------------------------------------~t~~~~p-~ 116 (203)
T 2gee_A 109 -----------------------------------------------------------------------TQQTAVP-P 116 (203)
T ss_dssp -----------------------------------------------------------------------EEECCCC-C
T ss_pred -----------------------------------------------------------------------eecCCCc-C
Confidence 0111345 8
Q ss_pred CcccEEeeeeCceEEEEecCCCCCCCCccceEEEeeeecCC-CceEEecceeeeceEEEecCCCCceeeEEEEEEecccc
Q psy7042 905 PENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNS-TVWTKVSSYVTTPFVRVRNLAIGSTYEFRVMAENQYGL 983 (2245)
Q Consensus 905 p~~l~~~~~~~~~~~l~W~~p~~~~g~~i~~y~i~~~~~~~-~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~ 983 (2245)
|.++.+...+++++.|+|++|. ++ .+.+|.|+|..... ..+...........+.|.+|.|++.|.|+|+|.|..|.
T Consensus 117 P~~l~~~~~~~~sv~l~W~~p~--~~-~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~ 193 (203)
T 2gee_A 117 PTDLRFTNIGPDTMRVTWAPPP--SI-DLTNFLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHE 193 (203)
T ss_dssp CEEEEEEEEETTEEEEEEECCS--SC-CCSEEEEEEEETTCGGGCEEEEECTTCCEEEECSCCTTCEEEEEEEEEETTEE
T ss_pred CCceEEEEcCCCEEEEEEcCCC--CC-CccEEEEEEEECCCCCccEEEEcCCCcCEEEECCCCCCCEEEEEEEEecCCCc
Confidence 9999999999999999999985 23 89999999998544 34555555667789999999999999999999999998
Q ss_pred CCCc
Q psy7042 984 SKPA 987 (2245)
Q Consensus 984 ~~~s 987 (2245)
|++.
T Consensus 194 s~p~ 197 (203)
T 2gee_A 194 STPL 197 (203)
T ss_dssp CCCE
T ss_pred CCCe
Confidence 8764
No 374
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.56 E-value=4.8e-13 Score=142.25 Aligned_cols=244 Identities=15% Similarity=0.159 Sum_probs=157.8
Q ss_pred CCceecCCcceEEeCCCeEEEEEEEee-ec---CCceEEEECCeeccCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEE
Q psy7042 90 KPDFIVPLKDLVVPLGKLLTLQCEATG-TP---VPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEA 165 (2245)
Q Consensus 90 ~P~~~~~~~~~~v~~G~~v~L~C~~~g-~p---~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a 165 (2245)
++.+...|....+..|+.++|+|.+.| .| ...++|+|||..+... .+ .|.|..++..|+|.|+|++
T Consensus 2 ~~tVs~~P~~~~i~~GdsVTLTatVaGGkP~pspyTYqWyKDG~~IsGa--------T~--tLti~s~t~sdSG~YqCvV 71 (304)
T 3shs_A 2 AFTVSIQSNKRCFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHENN--------TA--TLTVADATSENAGSYKVTV 71 (304)
T ss_dssp CEEEEEEESCSSBCTTCCEEEEEEEEESSSCCCCEEEEEEETTEECSCC--------SS--EEEESSCCGGGCEEEEEEE
T ss_pred ccEEEeCCCCccccCCCCEEEEEEecCCCCCCCCceEEEEECCccccCC--------cc--eEEeeeccccCCeEEEEEE
Confidence 345566677778899999999999864 56 3479999999987632 12 5889999999999999999
Q ss_pred EcCcccceeEEEEEecCC--Cee-ecCCCceEEcCCCeEEEEEEE--ec-CC-----CceEEEeeCceeeecCCceEEEE
Q psy7042 166 YNSVGFAHTSSRVKIGTP--PRI-DRMPNALYIPEGDNTKVKIFY--AG-DQ-----PMEVSLTKNGRVVQSDDRFKFTV 234 (2245)
Q Consensus 166 ~n~~g~~~~~~~l~V~~~--P~~-~~~~~~~~v~~G~~~~l~C~~--~g-~p-----~~~i~W~~~g~~l~~~~~~~~~~ 234 (2245)
.+..|....+..+.|..+ +.+ ...|....+..|..+.|.+.+ .| .| ...++||||+..+....
T Consensus 72 TDa~Gcs~tSs~VtVT~~a~l~i~it~P~s~~vssg~sVtL~aTVt~SGGtppA~~~~yTYQWyKngt~IsgAq------ 145 (304)
T 3shs_A 72 QDTDTMTSVESEVFLMEEAELIVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVIDTTQ------ 145 (304)
T ss_dssp EETTTCCEEECCCEEECBCCEEEEESSCSEEEECSSCCEEEEEEEEETTSCCSSTTCCCEEEEEETTEEEESSS------
T ss_pred EECCCCeeeeeeEEEeccCceeEEecCCCceeccCCCeEEEEEEEeccCCCCcccCCCceeEEeeCCeEccCcc------
Confidence 999888766555555443 333 344777778889999999988 43 44 46999999999874332
Q ss_pred eCCeEEEEEcccCccCceeEEEEEEcCCcc--eEEEEEEEEecCCCCCCCCcccceeeccceEE----EecCCCCCCCce
Q psy7042 235 LDDYIIIFIKEIRKEDAGDYTVNLSNSSGS--VSGTFTINITGLPGPPIGPLDVSEITKHTCTL----HWNPPKYDGGLK 308 (2245)
Q Consensus 235 ~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~--~~~~~~l~V~~~p~~~~~~~~~~~~~~~s~~~----~w~pp~~~~~~~ 308 (2245)
.|.+......++|.|+|++.|..+. .+.++.+.+...+.+...-..-....+..+.+ +-.-.....|++
T Consensus 146 -----~lT~sS~TateaG~YtV~VTn~~~~c~~s~~~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (304)
T 3shs_A 146 -----DITIQEFTADKNGVYTVKVWGESEDSAASASTKIMLATMNVDQDVVESKTVALGNEISLNYVVSEDIVGDSSGMP 220 (304)
T ss_dssp -----EEEECSCCGGGCEEEEEEEESSSGGGCEEEEEEEEECEEEEEECCCSEEEEETTSCEEECCEEEEECCSCCTTCC
T ss_pred -----ccceeeEEecCCeEEEEEEEcCCCCcccccceEEEEEccccchhheEeehhhcCcEEEEEEEEeeccccCCCCCC
Confidence 4778888899999999999999763 45555565544332211111111222222222 212122234454
Q ss_pred eE--EEEEEEEecCCCceEEeeecc----------CcceEEEcCCCCCCEEEEEEEEE
Q psy7042 309 VT--HYVVERRDISMPHWICISTTC----------HDTTFIVQGLTEGQEYLFHVMAV 354 (2245)
Q Consensus 309 ~~--~~~~~~~~~~~~~~~~~~~~~----------~~~~~~i~~l~~~~~~~~~c~a~ 354 (2245)
.. .|.|..+......-..+.++. .+..+.-.....++...|.|.|.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (304)
T 3shs_A 221 NLTIKYNWYLQREGQLSPTLIGSEVGEALEGFSITPDGHLFKESATYDDTAKFWCVAK 278 (304)
T ss_dssp EEEEEEEEEEECTTCCSCEEEESSSEECGGGEEECTTSCEEESSCCGGGCEEEEEEEE
T ss_pred ceEEEEEEEEeecCccCchhhhhhhhhhhccceeCCCcceeecccccccchheeeHHH
Confidence 43 455554443332222222211 22344445667788999999984
No 375
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.56 E-value=4.8e-15 Score=166.32 Aligned_cols=169 Identities=14% Similarity=0.200 Sum_probs=107.9
Q ss_pred cCCcceE-EeCCCeEEEEEEEeeecC----CceEEEECCeeccCCCeE-EEEEcCcEE----EEEEeeeccCCCeEEEEE
Q psy7042 95 VPLKDLV-VPLGKLLTLQCEATGTPV----PKCRWLRNGREISSGARY-RVETAGGVF----RLHFNEVTDVDNGDYTCE 164 (2245)
Q Consensus 95 ~~~~~~~-v~~G~~v~L~C~~~g~p~----~~i~W~~~g~~l~~~~~~-~~~~~~~~~----~L~i~~~~~~d~G~Y~C~ 164 (2245)
.+|.... +.+|+.++|.|.+.|.|+ +.|.|+|+|..+...... .....++.+ .|.|.....+|+|.|+|.
T Consensus 7 ~pps~~~~~~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~g~Y~C~ 86 (207)
T 1l6x_A 7 FPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCK 86 (207)
T ss_dssp ECCCHHHHHCTTSCCEEEEEEEEECSSSCCCEEEEEETTEEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEE
T ss_pred eCcChHHheecCCceEEEEEEecccCCCCCeEEEEEECCccccCcccCCceeccCCcEEEEEEEEEEHHHccCCceEEEE
Confidence 3444333 378999999999998753 489999999887643211 111223321 233334444559999999
Q ss_pred EEcCcccceeEEEE----EecCCCeeecCCCceEEcCCCeEEEEEEEecC-CC-ceEEEeeCceeeecCCceEEEEe-CC
Q psy7042 165 AYNSVGFAHTSSRV----KIGTPPRIDRMPNALYIPEGDNTKVKIFYAGD-QP-MEVSLTKNGRVVQSDDRFKFTVL-DD 237 (2245)
Q Consensus 165 a~n~~g~~~~~~~l----~V~~~P~~~~~~~~~~v~~G~~~~l~C~~~g~-p~-~~i~W~~~g~~l~~~~~~~~~~~-~~ 237 (2245)
|.|..+....+..+ .+..+|.+...+......+|..++|.|.+.|. |+ +.|+|+|||..+........... ++
T Consensus 87 a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~g 166 (207)
T 1l6x_A 87 VSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDG 166 (207)
T ss_dssp EECTTSSSCEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECCCEECTTS
T ss_pred EEcCcCCcceEEEeccCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeCeECCCeEEEEEECCeeccCccccCceECCCC
Confidence 99988865444444 45567876654433222356679999999984 54 49999999998753221111111 11
Q ss_pred ----eEEEEEcccCccCceeEEEEEEcCCc
Q psy7042 238 ----YIIIFIKEIRKEDAGDYTVNLSNSSG 263 (2245)
Q Consensus 238 ----~~~L~i~~~~~~d~G~Y~C~a~n~~g 263 (2245)
...|.|.....+|.|.|+|.|.|...
T Consensus 167 t~~~~s~l~i~~~~~~~~g~YtC~a~n~~l 196 (207)
T 1l6x_A 167 SFFLYSKLTVDKSRWQQGNVFSCSVMHEAL 196 (207)
T ss_dssp CEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred CEEEEEEEEECHHHcCCCCEEEEEEEcCCc
Confidence 12355666556789999999999863
No 376
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.56 E-value=3e-14 Score=168.77 Aligned_cols=179 Identities=17% Similarity=0.248 Sum_probs=130.5
Q ss_pred cCCceEEcCCCeEEEEEEecCcC--CCeEEEeeCC--Eec-----------------cCCceEEEEe--cCcEEEEEEee
Q psy7042 1703 PLKDLVVPLGKLLTLQCEATGTP--VPKCRWLRNG--REI-----------------SSGARYRVET--AGGVFRLHFNE 1759 (2245)
Q Consensus 1703 ~~~~~~~~~G~~v~L~C~~~~~p--~~~v~W~~~~--~~l-----------------~~~~~~~~~~--~~~~~~L~i~~ 1759 (2245)
.+..+.+.+|++++|.|.+.+.+ .+.+.|+|++ ..+ ....|+.+.. .++..+|.|.+
T Consensus 32 ~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 111 (282)
T 1qok_A 32 QSGAELVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQLSS 111 (282)
T ss_dssp ECCCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEECS
T ss_pred CCCCEEEeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEEECc
Confidence 35568899999999999998775 5789999953 111 0124666654 34678899999
Q ss_pred eccCCCeEEEEEEecCce---e--eEEEEEEEecCCC---------------ccccCCCceEEcCCCeEEEEEEEeccCC
Q psy7042 1760 VTDVDNGDYTCEAYNSVG---F--AHTSSRVKIGTPP---------------RIDRMPNALYIPEGDNTKVKIFYAGDQP 1819 (2245)
Q Consensus 1760 v~~~d~G~Y~C~~~n~~g---~--~~~~~~l~V~~~p---------------~~~~~~~~~~~~~g~~~~l~C~~~~~p~ 1819 (2245)
++.+|+|.|.|.+.|..| . ....+.|.|..+| .+...+....+.+|++++|.|.+.+.+
T Consensus 112 v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~- 190 (282)
T 1qok_A 112 LTSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGEKVTITCSASSSV- 190 (282)
T ss_dssp CCGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECSEEEECTTCCEEEEEEESSCC-
T ss_pred CChhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCCEEEEcCCCcEEEEEEecCCC-
Confidence 999999999999999865 1 1123567776543 345556678899999999999999998
Q ss_pred cEEEEEE--CCEEee------------cCCceEEEEcCCeEEEEEcccCcccceEEEEEEEcCCee-eEEEEEEEEeC
Q psy7042 1820 MEVSLTK--NGRVVQ------------SDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGS-VSGTFTINITG 1882 (2245)
Q Consensus 1820 ~~v~W~~--~g~~l~------------~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~v~~ 1882 (2245)
+.+.|+| +|+.+. ...++..........|.|.++..+|+|.|+|.|.|..+. -.....|.|..
T Consensus 191 ~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~~ 268 (282)
T 1qok_A 191 SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSSYPLTFGAGTKLELKR 268 (282)
T ss_dssp SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC-
T ss_pred ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhHCEEEEEEEeeCCCceEeCCEEEEEec
Confidence 8999999 565431 134565555556678999999999999999999986432 22235566653
No 377
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.56 E-value=5e-14 Score=163.77 Aligned_cols=169 Identities=16% Similarity=0.207 Sum_probs=123.5
Q ss_pred eeccCCceEEcCCCeEEEEEEecCcC-----CCeEEEeeCC--Ee---cc---------CCceEEEEecCcEEEEEEeee
Q psy7042 1700 FIVPLKDLVVPLGKLLTLQCEATGTP-----VPKCRWLRNG--RE---IS---------SGARYRVETAGGVFRLHFNEV 1760 (2245)
Q Consensus 1700 ~~~~~~~~~~~~G~~v~L~C~~~~~p-----~~~v~W~~~~--~~---l~---------~~~~~~~~~~~~~~~L~i~~v 1760 (2245)
+...+..+.+.+|++++|.|.+.+.+ .+.+.|+|+. .. +. ...|+.+...++..+|.|.++
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 83 (247)
T 1svz_A 4 MTQTPLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRV 83 (247)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSC
T ss_pred EEecCCeEEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECCC
Confidence 44556778999999999999998887 6889999842 21 10 135777766677888999999
Q ss_pred ccCCCeEEEEEEecCceee-EEEEEEEecCCC-------------ccccCCCceEEcCCCeEEEEEEEeccC--CcEEEE
Q psy7042 1761 TDVDNGDYTCEAYNSVGFA-HTSSRVKIGTPP-------------RIDRMPNALYIPEGDNTKVKIFYAGDQ--PMEVSL 1824 (2245)
Q Consensus 1761 ~~~d~G~Y~C~~~n~~g~~-~~~~~l~V~~~p-------------~~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~v~W 1824 (2245)
+.+|+|.|.|.+.|..+.. .....|.|..++ .....+....+.+|++++|.|.+.+.+ .+.+.|
T Consensus 84 ~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W 163 (247)
T 1svz_A 84 EAEDLGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQSGPELKKPGETVKISCKATNYAFTDYSMHW 163 (247)
T ss_dssp CGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEE
T ss_pred CHHHCEEEEEEEccCCccEECCCEEEEEECCccccccccccccCceEEeCCCceeecCCCcEEEEEEEcCcccCCcEEEE
Confidence 9999999999999875532 223577776643 122233345689999999999999875 569999
Q ss_pred EECC--EEe---e--------------cCCceEEEE--cCCeEEEEEcccCcccceEEEEEEEcC
Q psy7042 1825 TKNG--RVV---Q--------------SDDRFKFTV--LDDYIIIFIKEIRKEDAGDYTVNLSNS 1868 (2245)
Q Consensus 1825 ~~~g--~~l---~--------------~~~~~~~~~--~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 1868 (2245)
+|++ ..+ . ...++.+.. ......|.|.++..+|+|.|+|.|.|.
T Consensus 164 ~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 164 VKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNEDTATYFCVRDRH 228 (247)
T ss_dssp EEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEG
T ss_pred EEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCChhHCEEEEEEEecc
Confidence 9963 211 0 134455443 345578999999999999999999985
No 378
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.56 E-value=4.1e-14 Score=165.03 Aligned_cols=173 Identities=13% Similarity=0.205 Sum_probs=126.9
Q ss_pred ceeccCCceEEcCCCeEEEEEEecCcCCCeEEEeeCC--Eec-------------cCCceEEE--EecCcEEEEEEeeec
Q psy7042 1699 DFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNG--REI-------------SSGARYRV--ETAGGVFRLHFNEVT 1761 (2245)
Q Consensus 1699 ~~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~~--~~l-------------~~~~~~~~--~~~~~~~~L~i~~v~ 1761 (2245)
.+...+..+.+.+|++++|.|.+.+.|.+.+.|+|.. ..+ ....|+.+ .......+|.|.+++
T Consensus 5 ~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~ 84 (256)
T 3tf7_C 5 SVTQPDARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVH 84 (256)
T ss_dssp EEECSCSEEEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSCC
T ss_pred EEEecCceEEecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCCC
Confidence 4555667789999999999999998899999999832 111 11234444 344667889999999
Q ss_pred cCCCeEEEEEEecCcee----eEEEEEEEecC--------------------CCccccCCCceEEcCCCeEEEEEEEecc
Q psy7042 1762 DVDNGDYTCEAYNSVGF----AHTSSRVKIGT--------------------PPRIDRMPNALYIPEGDNTKVKIFYAGD 1817 (2245)
Q Consensus 1762 ~~d~G~Y~C~~~n~~g~----~~~~~~l~V~~--------------------~p~~~~~~~~~~~~~g~~~~l~C~~~~~ 1817 (2245)
.+|+|.|.|.+.|..+. ......|.|.. +|.+...+....+.+|++++|.|.+.+.
T Consensus 85 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~ 164 (256)
T 3tf7_C 85 RSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSPRNKVTVTGENVTLSCRQTNS 164 (256)
T ss_dssp GGGCSEEEEEEECTTCTTCEEECCCEEEEEEC---------------------CCEEESCSEEEEETTCCEEECEEECSC
T ss_pred cccCEEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecCCEEEEeCCCcEEEEEEcCCC
Confidence 99999999999987542 22235666654 5677778888889999999999999887
Q ss_pred CCcEEEEEECC--E---Eee------------cCCceEEEE-cCCeEEEEEcccCcccceEEEEEEEcCCeee
Q psy7042 1818 QPMEVSLTKNG--R---VVQ------------SDDRFKFTV-LDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV 1872 (2245)
Q Consensus 1818 p~~~v~W~~~g--~---~l~------------~~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~ 1872 (2245)
.+.+.|+|.. . .+. ...++.+.. ......|.|.++..+|+|.|+|.|.|..|..
T Consensus 165 -~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~~ 236 (256)
T 3tf7_C 165 -HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQTSLYFCASSDAPGQL 236 (256)
T ss_dssp -CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEEEETTEE
T ss_pred -ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHCEEEEEEecCCCCcc
Confidence 6799999832 1 111 122333322 2344589999999999999999999987754
No 379
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.56 E-value=7.5e-15 Score=163.33 Aligned_cols=153 Identities=14% Similarity=0.175 Sum_probs=107.7
Q ss_pred EcCCCeEEEEEEecCcCCCeEEEeeCCEeccCCceEEEEecCcEEEEEEeeeccCCCeEEEEEEecCceeeEEEEEEEec
Q psy7042 1709 VPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIG 1788 (2245)
Q Consensus 1709 ~~~G~~v~L~C~~~~~p~~~v~W~~~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~l~V~ 1788 (2245)
+.+|++++|.|.+ |.+.+.|+|+|..+... .....+|.|.+++.+|+|.|+|.+.+.... ...|.|.
T Consensus 15 ~~~G~~v~L~C~~---p~~~i~W~k~g~~l~~~-------~~~~~~L~i~~v~~~DsG~Y~C~~~~~~s~---~~~v~v~ 81 (204)
T 1sy6_A 15 YQEDGSVLLTCDA---EAKNITWFKDGKMIGFL-------TEDKKKWNLGSNAKDPRGMYQCKGSQNKSK---PLQVYYR 81 (204)
T ss_dssp CCSSSEEEEEECS---CSSEEEEEETTEEEEEE-------ESSCCCEEEEEGGGCCEEEEEEESSSSCCC---CEEEEEE
T ss_pred ecCCCeEEEEEcC---CCCEEEEEECCEECCCC-------CCCCCeEEeCCCCcCCCEEEEEEecCCCCe---eEEEEEE
Confidence 4689999999998 77899999999887532 112234999999999999999997653221 1333333
Q ss_pred ---------------------------C----CCccccCCCceEEc-CCCeEEEEEEEeccCCcEEEEEECCEEeecCC-
Q psy7042 1789 ---------------------------T----PPRIDRMPNALYIP-EGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDD- 1835 (2245)
Q Consensus 1789 ---------------------------~----~p~~~~~~~~~~~~-~g~~~~l~C~~~~~p~~~v~W~~~g~~l~~~~- 1835 (2245)
. ++.+...+ ..+. +|++++|.|. |.|.+.+.|+|+|..+....
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~v~~~G~~v~L~C~--g~p~p~i~W~k~~~~l~~~~~ 157 (204)
T 1sy6_A 82 MGSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTP--YKVSISGTTVILTCP--QYPGSEILWQHNDKNIGGDED 157 (204)
T ss_dssp C------------------------------------CCC--CEEEEETTEEEEECS--CCCSSCEEEEETTEEESCCTT
T ss_pred EeccccccccccccccccccccccccccccccccceecCC--ceeeecCCcEEEEcC--CCCCCceEEEECCEECCCccC
Confidence 0 22222222 2344 8999999999 78889999999999885431
Q ss_pred ceEEEEcCCeEEEEEccc-CcccceEEEEEEEcCCee-eEEEEEEEE
Q psy7042 1836 RFKFTVLDDYIIIFIKEI-RKEDAGDYTVNLSNSSGS-VSGTFTINI 1880 (2245)
Q Consensus 1836 ~~~~~~~~~~~~l~i~~~-~~~d~G~Y~C~a~n~~g~-~~~~~~l~v 1880 (2245)
...+... ...|.|.++ ..+|+|.|+|.|.|..|. .+..+.|.+
T Consensus 158 ~~~~~~~--~~~L~I~~v~~~~D~G~Y~C~A~N~~g~~~s~~l~l~~ 202 (204)
T 1sy6_A 158 DKNIGSD--EDHLSLKEFSELEQSGYYVCYPRGSKPEDANFYLYLRA 202 (204)
T ss_dssp CTTEEEE--TTEEEETTCCHHHHCEEEEEEETTSCGGGSSCEEEEEE
T ss_pred CceEecC--CCEEEEeeCCccccCEEEEEEeccCCCCceeEEEEEEE
Confidence 1112212 347999999 999999999999999996 345555554
No 380
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.56 E-value=1e-14 Score=169.98 Aligned_cols=176 Identities=15% Similarity=0.204 Sum_probs=126.4
Q ss_pred CCceeccCCceEEcCCCeEEEEEEecCcC-----CCeEEEeeCC--Eec------------cCCceEEEEecCcEEEEEE
Q psy7042 1697 KPDFIVPLKDLVVPLGKLLTLQCEATGTP-----VPKCRWLRNG--REI------------SSGARYRVETAGGVFRLHF 1757 (2245)
Q Consensus 1697 ~p~~~~~~~~~~~~~G~~v~L~C~~~~~p-----~~~v~W~~~~--~~l------------~~~~~~~~~~~~~~~~L~i 1757 (2245)
.+.+...+..+.+.+|++++|.|.+.+.+ .+.+.|+|++ ..+ ....|+.+...++..+|.|
T Consensus 34 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I 113 (252)
T 3bkj_L 34 DVLMTQTPLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRI 113 (252)
T ss_dssp CCCEEEECSEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEE
T ss_pred ccEEEeCCceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEE
Confidence 34455656778899999999999998887 5789999954 111 1135777766777888999
Q ss_pred eeeccCCCeEEEEEEecCceeeE-EEEEEEecC---CCccccCCCceEEcCCCeEEEEEEEecc-CCc-EEEEEECCEEe
Q psy7042 1758 NEVTDVDNGDYTCEAYNSVGFAH-TSSRVKIGT---PPRIDRMPNALYIPEGDNTKVKIFYAGD-QPM-EVSLTKNGRVV 1831 (2245)
Q Consensus 1758 ~~v~~~d~G~Y~C~~~n~~g~~~-~~~~l~V~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~v~W~~~g~~l 1831 (2245)
.+++.+|+|.|.|.+.|..+... ....|.|.. +|.+...+....+.+|+.++|.|.+.|. |.+ .|+|+|+|+.+
T Consensus 114 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~ 193 (252)
T 3bkj_L 114 SRVEAEDLGVYYCFQASLVPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSER 193 (252)
T ss_dssp SSCCGGGCEEEEEEECSBSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEEE
T ss_pred CCCCcccCEEEEEEEEcCCccEECCCEEEEEeCCCcCcEEEEeCCChhhcCCCcEEEEEEEeeEeCCCcEEEEEECCeec
Confidence 99999999999999998755322 234577754 5665543333334468999999999984 543 89999999987
Q ss_pred ecCCceEE--EEcCC-----eEEEEEcccCcccceEEEEEEEcCCeee
Q psy7042 1832 QSDDRFKF--TVLDD-----YIIIFIKEIRKEDAGDYTVNLSNSSGSV 1872 (2245)
Q Consensus 1832 ~~~~~~~~--~~~~~-----~~~l~i~~~~~~d~G~Y~C~a~n~~g~~ 1872 (2245)
........ ....+ ...|.|..+..+|+|.|+|.|.|.....
T Consensus 194 ~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 241 (252)
T 3bkj_L 194 QNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 241 (252)
T ss_dssp CSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSS
T ss_pred CCCeeeecCcccCCCCCEEEEEEEEEcchhccCCCeEEEEEEeCCCCC
Confidence 54411110 00111 1468999999999999999999986543
No 381
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.56 E-value=2.1e-14 Score=165.73 Aligned_cols=170 Identities=12% Similarity=0.137 Sum_probs=52.5
Q ss_pred cccccceeeEEEEeccCc-C--eEEEEeCCeecCCCccEEEEeeCCeEEEEEecccccCCceEEEEEEeCCCC-------
Q psy7042 492 AIQNHNAQFQCTITGCPK-P--TISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGV------- 561 (2245)
Q Consensus 492 ~~~g~~~~l~C~~~g~p~-~--~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~------- 561 (2245)
+.+|+.++|.|.+.|.++ . .|+|+|+++.+..... ........|.+.....+|.+.|+|+|.|..+.
T Consensus 98 ~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~~~---~~~~~~~~l~~~~~~~D~g~~~~C~A~~~l~~~g~~l~~ 174 (291)
T 1mq8_A 98 QPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPA---VGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFE 174 (291)
T ss_dssp CCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEEEEC---CBTTEEEEEECCCSSSCSSCEEEEEEEEECGGGTSCEEE
T ss_pred ccCCCCEEEEEEecCccCCCCcEEEEEECCEEeecccC---CCCCceEEEEeeeeeccCCceEEEEEEecCCccCCcccc
Confidence 467899999999988543 3 5999999987753220 01112235666666667777999999997653
Q ss_pred -CCcceeEeEecCCCCCCCCCcccceEeeCCCeEEEEEeeeecCCC---eEEEEeCCeEeeccCeEEEEecCCeEEEEEc
Q psy7042 562 -KSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKP---KITWYRDNEVIESGGHFHVETSERHAILTIR 637 (2245)
Q Consensus 562 -~~~~~~l~v~~~p~~~~~p~~~~~~~~~~g~~~~l~C~~~g~p~~---~i~W~~~~~~~~~~~~~~~~~~~~~~~l~i~ 637 (2245)
.+....|.|.++|........ ...+.+|+.++|.|.+.|.|++ .++|+++|..+.... ...+ ..+.+.
T Consensus 175 ~~s~~~~L~V~~~P~~~~~~~~--p~~l~eG~~v~l~C~~~g~~P~~~~~v~w~~~g~~l~~~~----~~~g--~~~~~~ 246 (291)
T 1mq8_A 175 NTSAPYQLQTFVLPATPPQLVS--PRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNPTV----TYGN--DSFSAK 246 (291)
T ss_dssp ECCCCEECBC----------------------------------------------------------------------
T ss_pred ccccceEEEEEecCCCCceecC--CcCccCCCeEEEEEEcCCCCCCcccEEEEEECCEecCcee----eecC--CeEEEE
Confidence 355678888887643211111 1246789999999999998654 699999998876421 1112 122232
Q ss_pred CC---CC--CcCEEEEEEEEeCCCCceeEEEEEeeCCCCC
Q psy7042 638 DA---SN--VDTAPYRVVAENDLGMDSAIVKIQISDRPDP 672 (2245)
Q Consensus 638 ~~---~~--~d~g~y~C~a~n~~g~~~~~~~l~v~~~P~~ 672 (2245)
.+ .. ++.|.|+|.|.|......+...|.|.+-|.|
T Consensus 247 ~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~l~v~~~~~~ 286 (291)
T 1mq8_A 247 ASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPAP 286 (291)
T ss_dssp ----------------------------------------
T ss_pred EecceeEcCCCCEEEEEEEEeCCcceEEEEEEEEEcCCCc
Confidence 22 23 4467788888875555567777888765554
No 382
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.56 E-value=8.5e-15 Score=166.69 Aligned_cols=174 Identities=11% Similarity=0.134 Sum_probs=119.8
Q ss_pred CCceEEcCCCeEEEEEEecCcC--CCeEEEeeC--CEecc-----------------CCceEEEEec--CcEEEEEEeee
Q psy7042 1704 LKDLVVPLGKLLTLQCEATGTP--VPKCRWLRN--GREIS-----------------SGARYRVETA--GGVFRLHFNEV 1760 (2245)
Q Consensus 1704 ~~~~~~~~G~~v~L~C~~~~~p--~~~v~W~~~--~~~l~-----------------~~~~~~~~~~--~~~~~L~i~~v 1760 (2245)
+..+.+.+|++++|.|.+.+.+ .+.+.|+|+ +..+. ...|+.+..+ .+..+|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (219)
T 1c1e_H 7 SGPELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINNL 86 (219)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECSC
T ss_pred CCCeEecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECCC
Confidence 4457899999999999998765 678999996 33221 1246665543 45678999999
Q ss_pred ccCCCeEEEEEEecCcee----eEEEEEEEecCC----CccccCCCceEEcCCCeEEEEEEEec-cCCc-EEEEEECCEE
Q psy7042 1761 TDVDNGDYTCEAYNSVGF----AHTSSRVKIGTP----PRIDRMPNALYIPEGDNTKVKIFYAG-DQPM-EVSLTKNGRV 1830 (2245)
Q Consensus 1761 ~~~d~G~Y~C~~~n~~g~----~~~~~~l~V~~~----p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~v~W~~~g~~ 1830 (2245)
+.+|+|.|+|.+.|..+. ......|.|... |.+...+....+.+|+.+.|.|.+.| .|.+ .|+|+++|..
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~ 166 (219)
T 1c1e_H 87 KNEDMATYFCARGTTIVRAMDYWGQGTSLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLS 166 (219)
T ss_dssp CGGGCEEEEEEEEETTTTEEEEECCCEEEEECCCCCBCCEEEEECCCSSSCCSSEEEEEEEEEEEBSSCCEEEEGGGTBC
T ss_pred CcccCEEEEEEEeccCcccceeecCceEEEEecCCCCCCeEEEecCccccccCCeEEEEEEcccccCCCeEEEEEeCCcc
Confidence 999999999999987631 223467777653 55544333334678999999999999 7888 9999999876
Q ss_pred eecCCceEEEEcCC---eEEEEEcccCcccceEEEEEEEcCCeeeEEEEEE
Q psy7042 1831 VQSDDRFKFTVLDD---YIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTI 1878 (2245)
Q Consensus 1831 l~~~~~~~~~~~~~---~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 1878 (2245)
+...........+. ...|.| .....|.|.|+|.|.|..|.......+
T Consensus 167 ~~~~~~~~~~~~~~~~~~s~L~i-~~~~~d~g~Y~C~a~n~~~~~~~~~~i 216 (219)
T 1c1e_H 167 SGVHTFPAVLQSDLYTLSSSVTV-PSSPRPSETVTCNVAHPASSTKVDKKI 216 (219)
T ss_dssp TTEEECCCEESSSCEEEEEEEEE-ESSSTTTSCCEEEEEEGGGTEEEEEEC
T ss_pred cceEecCCcccCCeEEEEEEEEE-ecccCCCCEEEEEEEeCCCCccEEEec
Confidence 42110000000111 136888 444446699999999998876555444
No 383
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.55 E-value=2.3e-14 Score=169.57 Aligned_cols=175 Identities=14% Similarity=0.209 Sum_probs=125.1
Q ss_pred CCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECC--eec--------------c---CCCeEEEEEc-CcEEEEE
Q psy7042 90 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNG--REI--------------S---SGARYRVETA-GGVFRLH 149 (2245)
Q Consensus 90 ~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g--~~l--------------~---~~~~~~~~~~-~~~~~L~ 149 (2245)
.+.++..|..+.+.+|++++|.|.+.+.|.+.|.|+|++ ..+ . ..+|+.+..+ ++..+|.
T Consensus 24 ~~~v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~ 103 (279)
T 2wbj_D 24 GAVVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLT 103 (279)
T ss_dssp CCCEEEECSEEEEETTSCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEE
T ss_pred cceEEeCCCeEEecCCCeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEE
Confidence 567778888899999999999999988888899999953 111 0 1357777653 4567899
Q ss_pred EeeeccCCCeEEEEEEEcCcc------cceeEEEEEecC------CCeeecC-CCceEEcCCCeEEEEEEEecC-CC-ce
Q psy7042 150 FNEVTDVDNGDYTCEAYNSVG------FAHTSSRVKIGT------PPRIDRM-PNALYIPEGDNTKVKIFYAGD-QP-ME 214 (2245)
Q Consensus 150 i~~~~~~d~G~Y~C~a~n~~g------~~~~~~~l~V~~------~P~~~~~-~~~~~v~~G~~~~l~C~~~g~-p~-~~ 214 (2245)
|.+++.+|+|.|+|.|.|..+ .....+.|+|.. +|.+... +....+.+|+.++|.|.+.|. |+ +.
T Consensus 104 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~ 183 (279)
T 2wbj_D 104 VTSAHPEDSSFYICSARDLTSGANNEQFFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVE 183 (279)
T ss_dssp ESSCCGGGCEEEEEEEEETTCBTSCCEEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSCCEEEEEEEEEBSSCEE
T ss_pred EccCCccCCEEEEEEEcccccCCccceeeCCCEEEEEecCCCCCCCCEEEEECCCcccccCCCceEEEEEEeeEcCCCcE
Confidence 999999999999999998432 112235677764 5665433 444455679999999999986 53 79
Q ss_pred EEEeeCceeeecCCceE---EE----EeCC----eEEEEEcccCccC-ceeEEEEEEcCCcc
Q psy7042 215 VSLTKNGRVVQSDDRFK---FT----VLDD----YIIIFIKEIRKED-AGDYTVNLSNSSGS 264 (2245)
Q Consensus 215 i~W~~~g~~l~~~~~~~---~~----~~~~----~~~L~i~~~~~~d-~G~Y~C~a~n~~g~ 264 (2245)
|+|+|||..+..+.... .. ..+. ...|.|......| .|.|+|.|.|....
T Consensus 184 v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~~~YtC~v~n~~~~ 245 (279)
T 2wbj_D 184 LSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLS 245 (279)
T ss_dssp EEEEETTEECCTTEEECSSCEESSTTSTTCCEEEEEEEECCSTTTTCTTCEEEEEEEECCBC
T ss_pred EEEEECCEECCCCcccccccccccccCCCCcEEEEEEEEEChHHhccCCCEEEEEEEeCCCC
Confidence 99999999886432110 00 0111 1358888777654 67899999997654
No 384
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.54 E-value=1e-13 Score=161.90 Aligned_cols=172 Identities=18% Similarity=0.290 Sum_probs=126.4
Q ss_pred CCceeccCCceEEcCCCeEEEEEEecCcC------CCeEEEeeC--CEecc------------CCceEEEEecCcEEEEE
Q psy7042 1697 KPDFIVPLKDLVVPLGKLLTLQCEATGTP------VPKCRWLRN--GREIS------------SGARYRVETAGGVFRLH 1756 (2245)
Q Consensus 1697 ~p~~~~~~~~~~~~~G~~v~L~C~~~~~p------~~~v~W~~~--~~~l~------------~~~~~~~~~~~~~~~L~ 1756 (2245)
.+.+...+..+.+.+|++++|.|.+.+.+ .+.+.|+|+ +..+. ...|+.+...+...+|.
T Consensus 5 ~~~v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~ 84 (264)
T 2gjj_A 5 DIVLTQTPSSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTLT 84 (264)
T ss_dssp CCCEEEECSEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEE
T ss_pred ccceEecCCeEEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEEE
Confidence 45566677888999999999999998877 678999984 22211 13577776666778899
Q ss_pred EeeeccCCCeEEEEEEecCceee-EEEEEEEecCCC------------------cc-ccCCCceEEcCCCeEEEEEEEec
Q psy7042 1757 FNEVTDVDNGDYTCEAYNSVGFA-HTSSRVKIGTPP------------------RI-DRMPNALYIPEGDNTKVKIFYAG 1816 (2245)
Q Consensus 1757 i~~v~~~d~G~Y~C~~~n~~g~~-~~~~~l~V~~~p------------------~~-~~~~~~~~~~~g~~~~l~C~~~~ 1816 (2245)
|.+++.+|+|.|.|.+.+..+.. .....|.|..+| .+ ...+....+.+|++++|.|.+.+
T Consensus 85 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~ 164 (264)
T 2gjj_A 85 IGSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPEVVKTGASVKISCKASG 164 (264)
T ss_dssp ESSCCGGGCEEEEEEECSSSSCEECCCEEEEEECC-------------------CCEEEECCCEEECTTCCEEEEEEEES
T ss_pred ECCCCHHHCEEEEEEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeCCCCEEEcCCCcEEEEEEEeC
Confidence 99999999999999999875422 223567776653 22 12233457889999999999998
Q ss_pred cCC--cEEEEEECC--E---Eee--------------cCCceEEEE--cCCeEEEEEcccCcccceEEEEEEEcC
Q psy7042 1817 DQP--MEVSLTKNG--R---VVQ--------------SDDRFKFTV--LDDYIIIFIKEIRKEDAGDYTVNLSNS 1868 (2245)
Q Consensus 1817 ~p~--~~v~W~~~g--~---~l~--------------~~~~~~~~~--~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 1868 (2245)
.+. +.+.|+|+. + .+. ...++.+.. ......|.|.++..+|+|.|+|.|.|.
T Consensus 165 ~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 239 (264)
T 2gjj_A 165 YSFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTSEDSADYYCVRSGN 239 (264)
T ss_dssp SCGGGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred CccCCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCcccCEEEEEEEecC
Confidence 864 799999863 2 221 023444443 235678999999999999999999985
No 385
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.54 E-value=7.9e-14 Score=163.15 Aligned_cols=165 Identities=13% Similarity=0.201 Sum_probs=120.6
Q ss_pred CceEEcCCCeEEEEEEecCc--CCCeEEEeeCC--Eec------------cCCceEEEEecCcEEEEEEeeeccCCCeEE
Q psy7042 1705 KDLVVPLGKLLTLQCEATGT--PVPKCRWLRNG--REI------------SSGARYRVETAGGVFRLHFNEVTDVDNGDY 1768 (2245)
Q Consensus 1705 ~~~~~~~G~~v~L~C~~~~~--p~~~v~W~~~~--~~l------------~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y 1768 (2245)
..+.+.+|++++|.|.+.+. +.+.+.|+|+. ..+ ....|+.+...+...+|.|.+++.+|+|.|
T Consensus 10 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y 89 (256)
T 3ux9_B 10 PSVSGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSEDEADY 89 (256)
T ss_dssp SEEEECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEEE
T ss_pred CcEEEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChhhCEEE
Confidence 45789999999999999876 77889999842 111 123577777777788999999999999999
Q ss_pred EEEEecCcee---eEEEEEEEecCCCc--------------------cccCCCceEEcCCCeEEEEEEEeccC--CcEEE
Q psy7042 1769 TCEAYNSVGF---AHTSSRVKIGTPPR--------------------IDRMPNALYIPEGDNTKVKIFYAGDQ--PMEVS 1823 (2245)
Q Consensus 1769 ~C~~~n~~g~---~~~~~~l~V~~~p~--------------------~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~v~ 1823 (2245)
+|.+.+..+. ......|.|..+|. ....+....+.+|++++|.|.+.+.+ .+.+.
T Consensus 90 ~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~ 169 (256)
T 3ux9_B 90 YCQVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVESGGGLVQPGGSLRLSCAASGFTFSSYAMS 169 (256)
T ss_dssp EEEEEETTTTEEEECCCEEEEEC----------------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEEE
T ss_pred EEEEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEcCCCeEEcCCCeEEEEEEEeCCcccccEEE
Confidence 9999986432 22346777776542 12223345688999999999999876 78999
Q ss_pred EEEC--CEEe-----------------ecCCceEEEEc--CCeEEEEEcccCcccceEEEEEEEcCC
Q psy7042 1824 LTKN--GRVV-----------------QSDDRFKFTVL--DDYIIIFIKEIRKEDAGDYTVNLSNSS 1869 (2245)
Q Consensus 1824 W~~~--g~~l-----------------~~~~~~~~~~~--~~~~~l~i~~~~~~d~G~Y~C~a~n~~ 1869 (2245)
|+|+ +..+ ....++.+... .....|.|.++..+|+|.|+|.|.|..
T Consensus 170 W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 236 (256)
T 3ux9_B 170 WVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARYIDF 236 (256)
T ss_dssp EEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred EEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCChhhCEEEEEEEEcCC
Confidence 9986 3322 11235555443 345679999999999999999999863
No 386
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.54 E-value=5.4e-15 Score=170.63 Aligned_cols=176 Identities=11% Similarity=0.197 Sum_probs=124.5
Q ss_pred ceeccCCceEEcCCCeEEEEEEecCcCC-C-eEEEeeCC--Eec------------cCCceEEEEecCcEEEEEEeeecc
Q psy7042 1699 DFIVPLKDLVVPLGKLLTLQCEATGTPV-P-KCRWLRNG--REI------------SSGARYRVETAGGVFRLHFNEVTD 1762 (2245)
Q Consensus 1699 ~~~~~~~~~~~~~G~~v~L~C~~~~~p~-~-~v~W~~~~--~~l------------~~~~~~~~~~~~~~~~L~i~~v~~ 1762 (2245)
.+.. +..+.+.+|++++|.|.+.+.+. + .+.|+|++ ..+ ....|+.+...++..+|.|.+++.
T Consensus 22 ~v~~-p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 100 (234)
T 2j6e_L 22 VLTQ-PPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRS 100 (234)
T ss_dssp CCBC-CSCCCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCCS
T ss_pred EEeC-CCcEEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCCH
Confidence 3444 56678999999999999987543 4 69999863 221 113567766666778899999999
Q ss_pred CCCeEEEEEEecCcee---eEEEEEEEec----CCCccccCCCceEEcCCCeEEEEEEEeccCC--cEEEEEECCEEeec
Q psy7042 1763 VDNGDYTCEAYNSVGF---AHTSSRVKIG----TPPRIDRMPNALYIPEGDNTKVKIFYAGDQP--MEVSLTKNGRVVQS 1833 (2245)
Q Consensus 1763 ~d~G~Y~C~~~n~~g~---~~~~~~l~V~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~--~~v~W~~~g~~l~~ 1833 (2245)
+|+|.|+|.+.|..+. ......|.|. .+|.+...+....+.+|+.++|.|.+.|.++ +.|+|+|||+.+..
T Consensus 101 ~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~ 180 (234)
T 2j6e_L 101 EDEADYYCATWDDSLSAVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFFPGAVTVAWKADGAPVKA 180 (234)
T ss_dssp TTCSEEEEEEEETTTTEEEECCCBCCCBCCCCCCCCCCCEECCCHHHHTTSCCCEEECCCBCSSCCCEEEEEETTEECCS
T ss_pred HHCEEEEEEEEcCCcceeEecCCEEEEEecCCCCCCcccccCCChhHhcCCceEEEEEEEEEcCCceEEEEEECCEECCC
Confidence 9999999999998762 2223566663 3555554333333446889999999998643 49999999998854
Q ss_pred CCceE-EEEcC-----CeEEEEEcccCcccceEEEEEEEcCCeeeEEE
Q psy7042 1834 DDRFK-FTVLD-----DYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGT 1875 (2245)
Q Consensus 1834 ~~~~~-~~~~~-----~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 1875 (2245)
..... ..... ....|.|..+..+|.|.|+|.|.|..+....+
T Consensus 181 ~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~ 228 (234)
T 2j6e_L 181 GVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKT 228 (234)
T ss_dssp SEEECCCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTBCCCEE
T ss_pred CccccCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCCceEEe
Confidence 41100 00001 22578999999999999999999998764443
No 387
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.54 E-value=7.7e-14 Score=162.44 Aligned_cols=177 Identities=12% Similarity=0.111 Sum_probs=119.2
Q ss_pred cCCceEEcCCCeEEEEEEecCcCCCe-----EEEeeCCEeccCC--------ceE-------EEE---ecCcEEEEEEee
Q psy7042 1703 PLKDLVVPLGKLLTLQCEATGTPVPK-----CRWLRNGREISSG--------ARY-------RVE---TAGGVFRLHFNE 1759 (2245)
Q Consensus 1703 ~~~~~~~~~G~~v~L~C~~~~~p~~~-----v~W~~~~~~l~~~--------~~~-------~~~---~~~~~~~L~i~~ 1759 (2245)
.+..+.+.+|++++|.|.+.+.|.+. +.|++++...... ... .+. ...+..+|.|.+
T Consensus 9 ~p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~ 88 (248)
T 3pv7_A 9 AGGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPG 88 (248)
T ss_dssp TTSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESS
T ss_pred CCCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCC
Confidence 34557899999999999998887765 9999964322100 000 000 112345599999
Q ss_pred eccCCCeEEEEEEecCceeeEEEEEEEecCCCccccCCCceEEcCCCeEEEEEEEec-cCCc-EEEEEECCEEeecC---
Q psy7042 1760 VTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAG-DQPM-EVSLTKNGRVVQSD--- 1834 (2245)
Q Consensus 1760 v~~~d~G~Y~C~~~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~v~W~~~g~~l~~~--- 1834 (2245)
++.+|+|.|+|.+.+..+.....+.|.|..+|.+...+. ..+..|+.+.|.|.+.| .|.+ .|+|+++|+.+...
T Consensus 89 v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~P~v~~~~~-~~~~~~~~~~L~C~~~g~~P~pi~v~W~k~g~~l~~~~~~ 167 (248)
T 3pv7_A 89 IQLEEAGEYRCEVVVTPLKAQGTVQLEVVASPASRLLLD-QVGMKENEDKYMCESSGFYPEAINITWEKQTQKFPHPIEI 167 (248)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCEEEEECC---------CEEEEEEEEEBSSCCEEEEEEECSSSCSCEEE
T ss_pred CCHHHCeEEEEEEEeCCccceeEEEEEEecCCceEEecC-CccccCCCcEEEEEEccEECCCeEEEEEECCccCCCcccc
Confidence 999999999999999988888889999999998766554 33456778889999999 7888 99999998633211
Q ss_pred ---Cc-eEEEEcC-----CeEEEEEcccCcccceEEEEEEEcCCee--eEEEEEEEE
Q psy7042 1835 ---DR-FKFTVLD-----DYIIIFIKEIRKEDAGDYTVNLSNSSGS--VSGTFTINI 1880 (2245)
Q Consensus 1835 ---~~-~~~~~~~-----~~~~l~i~~~~~~d~G~Y~C~a~n~~g~--~~~~~~l~v 1880 (2245)
.. ....... ....|.|.....+|.|.|+|.|.|..+. ....+.|.|
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~~~~~~~~~~v~l~V 224 (248)
T 3pv7_A 168 SEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHASLHTPLRSNFTLTA 224 (248)
T ss_dssp CTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEECTTCSSCEEEEECC--
T ss_pred ccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEECCCCCCCcEEEEEEEE
Confidence 00 0011111 1246888899999999999999999886 444555666
No 388
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.53 E-value=6.2e-14 Score=151.07 Aligned_cols=154 Identities=16% Similarity=0.238 Sum_probs=115.3
Q ss_pred CceEEcCCCeEEEEEEec--CcCCCeEEEee--CCEec----------cCCceEEEEecCcEEEEEEeeeccCCCeEEEE
Q psy7042 1705 KDLVVPLGKLLTLQCEAT--GTPVPKCRWLR--NGREI----------SSGARYRVETAGGVFRLHFNEVTDVDNGDYTC 1770 (2245)
Q Consensus 1705 ~~~~~~~G~~v~L~C~~~--~~p~~~v~W~~--~~~~l----------~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 1770 (2245)
..+....|++|+|.|... +.+.+.|.|+| ++..+ ....|+.+..++ +|.|.+++.+|+|.|+|
T Consensus 7 ~~v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ng---sL~I~~v~~~DsG~Y~c 83 (182)
T 1hnf_A 7 LETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNG---TLKIKHLKTDDQDIYKV 83 (182)
T ss_dssp EEEEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTTS---CEEECSCCGGGCEEEEE
T ss_pred cEEEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCCC---CEEECCCChhhCEEEEE
Confidence 346788999999999542 35667899999 88776 345677766444 49999999999999999
Q ss_pred EEecCceeeE--EEEEEEecCC---CccccCCCceEEcCCCeEEEEEEEeccCCcEEEEEECCEEeecCCceEEEEcCCe
Q psy7042 1771 EAYNSVGFAH--TSSRVKIGTP---PRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDY 1845 (2245)
Q Consensus 1771 ~~~n~~g~~~--~~~~l~V~~~---p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~ 1845 (2245)
.+.|..|... ..+.|.|..+ |.+. . .+..+.|.|.+.+.|.+.|.|+++|+.+. . ...
T Consensus 84 ~~~n~~g~~~~~~~~~L~V~~~~~~P~i~-------~-~~~~v~L~C~~~~~p~~~~~W~~~g~~l~-~-------~~~- 146 (182)
T 1hnf_A 84 SIYDTKGKNVLEKIFDLKIQERVSKPKIS-------W-TCINTTLTCEVMNGTDPELNLYQDGKHLK-L-------SQR- 146 (182)
T ss_dssp EEEETTSCEEEEEEEEEEEECCCCCCEEE-------E-ETTTTEEEEECSSCSSCEEEEEESSCEEE-E-------ESS-
T ss_pred EEEeCCCceeEEEEEEEEEcCcCCCCEEE-------E-ccCcEEEEeEccCCCCCEEEEEECCEECC-C-------CCc-
Confidence 9999887654 4567888653 2222 1 24479999999999999999999999871 1 111
Q ss_pred EEEEEcccCcccceEEEEEEEcCCeeeEEEEEEEE
Q psy7042 1846 IIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINI 1880 (2245)
Q Consensus 1846 ~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v 1880 (2245)
.|.+. ...+|+|.|+|.|.|..|..+....+..
T Consensus 147 -~i~~~-~~~~d~G~Y~C~a~N~~~~~~s~~~~~c 179 (182)
T 1hnf_A 147 -VITHK-WTTSLSAKFKCTAGNKVSKESSVEPVSC 179 (182)
T ss_dssp -CEEEE-CCSCEEEEEEEEEECSSCEEEEEEEEEE
T ss_pred -EEEEe-cccCCCcEEEEEEEeCCCCcEEcceecC
Confidence 23332 2478999999999999998887766643
No 389
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.53 E-value=8.7e-15 Score=165.85 Aligned_cols=195 Identities=13% Similarity=0.156 Sum_probs=113.5
Q ss_pred EEEEEEEEcCCCCCCCCCccccEEEeeccCCCCCceecCCcceE-EeCCCeEEEEEEEeeec----CCceEEEECCeecc
Q psy7042 58 YEFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLV-VPLGKLLTLQCEATGTP----VPKCRWLRNGREIS 132 (2245)
Q Consensus 58 G~Y~C~a~n~~g~~~~~~~~~~~~v~~~~~~~~P~~~~~~~~~~-v~~G~~v~L~C~~~g~p----~~~i~W~~~g~~l~ 132 (2245)
|.|.|..+|..+. +..... ...|+.++.+|+... +..|+.++|.|.+.|.+ ...|.|+|||..+.
T Consensus 1 ~~~~~~~~~~~~~-----c~~~~~-----~~~P~v~i~~ps~~~~l~~g~~~~L~C~v~g~~p~P~~i~v~W~k~g~~l~ 70 (240)
T 4acp_A 1 GTKSCDKTHTCPP-----CPAPEL-----LGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVH 70 (240)
T ss_dssp --------------------------------CEEEEECCCHHHHHSSSSCCEEEEEEESCCC--CCCEEEEEETTEEEC
T ss_pred CceeeeeeecCCC-----CCcccc-----CCCCEEEEECcChHHhcccCCCcEEEEEEeccccCCCccEEEEEECCcccC
Confidence 7899998886653 222211 123445555676665 66799999999999863 34799999999885
Q ss_pred CCCeEE--EEEcCc---EEEEEEeeeccCCCeEEEEEEEcCcccceeEEEE----EecCCCeeecCCCceEEcCCCeEEE
Q psy7042 133 SGARYR--VETAGG---VFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRV----KIGTPPRIDRMPNALYIPEGDNTKV 203 (2245)
Q Consensus 133 ~~~~~~--~~~~~~---~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l----~V~~~P~~~~~~~~~~v~~G~~~~l 203 (2245)
...... ...++. ...|.|.....+|.|.|+|.|.+..+.......+ .+..+|.+...+......+|+.++|
T Consensus 71 ~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~YtC~v~h~~~~~~~~~~i~~~~~~~~~P~V~v~~~~~~~~~g~~~~L 150 (240)
T 4acp_A 71 NAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSL 150 (240)
T ss_dssp CCEECCCEEC---CEEEEEEEECCHHHHHHTCCEEEEEECC----CEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEE
T ss_pred CceeccceECCCCeEEEEEEEEEechhccCCCEEEEEEEcCCCCccccccccccCCCCCCCEEEEECCChHHhcCCceEE
Confidence 432111 111111 1358888888889999999999987743333333 2456787766655444445999999
Q ss_pred EEEEec-CCCc-eEEEeeCceeeecCCceEEE--EeCC---eEEEEEcccCccCceeEEEEEEcCC
Q psy7042 204 KIFYAG-DQPM-EVSLTKNGRVVQSDDRFKFT--VLDD---YIIIFIKEIRKEDAGDYTVNLSNSS 262 (2245)
Q Consensus 204 ~C~~~g-~p~~-~i~W~~~g~~l~~~~~~~~~--~~~~---~~~L~i~~~~~~d~G~Y~C~a~n~~ 262 (2245)
.|.+.| +|.+ .|+|+|||..+......... .++. .+.|.|.....+|.|.|+|.|.|..
T Consensus 151 ~C~~~gf~P~~i~v~W~k~g~~~~~~~~~~~~~~~dgt~~~~s~L~v~~~~~~~~~~ytC~V~h~~ 216 (240)
T 4acp_A 151 TCLVKGFYPSDIAVEWESNGQPENNYKATPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEA 216 (240)
T ss_dssp EEEEEEEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTT
T ss_pred EEEEeEEeCCCcEEEEEECCEECCCcCccCceECCCCCEEEEEEEEEChHHhCCCCEEEEEEEECC
Confidence 999998 5653 89999999986422111111 1111 2356776666678999999999875
No 390
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.53 E-value=7.4e-14 Score=135.61 Aligned_cols=96 Identities=22% Similarity=0.304 Sum_probs=89.9
Q ss_pred CCCceEEeeccceeeecCccEEEEEEEEeeCCCeEEEeeCCEeeCCCCcEEEEEeCcEEEEEEcCCCCCCCeEEEEEEEe
Q psy7042 2085 AKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVN 2164 (2245)
Q Consensus 2085 ~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N 2164 (2245)
..+|.|...+.+..+.+|+.+.|.|.+.|.|.|.|.|+|+|..+....++.+..++....|.|.++..+|+|.|+|.|.|
T Consensus 6 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N 85 (103)
T 3qp3_A 6 DHAPRITLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYTNTSGVLTLEILDCHTDDSGTYRAVCTN 85 (103)
T ss_dssp CEEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCCCEEEeCCcceEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCEEEEECCCEEEEEEcCCCcccCEEEEEEEEe
Confidence 34689999999999999999999999999999999999999999999999999888888999999999999999999999
Q ss_pred CCceeeEEEEEEEEcC
Q psy7042 2165 KGGVKSTKAELIIMTA 2180 (2245)
Q Consensus 2165 ~~G~~~~~~~l~V~~~ 2180 (2245)
.+|..+..+.|.|...
T Consensus 86 ~~G~~~~~~~l~V~~~ 101 (103)
T 3qp3_A 86 YKGEASDYATLDVTGG 101 (103)
T ss_dssp TTEEEEEEEEEEEECC
T ss_pred CCCcEEEEEEEEEECC
Confidence 9999999999999754
No 391
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.53 E-value=6.6e-14 Score=138.78 Aligned_cols=101 Identities=18% Similarity=0.244 Sum_probs=92.4
Q ss_pred CCCceEEeeccceeeecCccEEEEEEEEeeCCCeEEEeeCCEeeCCCCcEEEEEeCcEEEEEEcCCCCCCCeEEEEEEEe
Q psy7042 2085 AKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVN 2164 (2245)
Q Consensus 2085 ~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N 2164 (2245)
..+|.|...+.++.+.+|+.++|.|.+.|.|.|.|.|+|+|..+....++.+...+....|.|.++..+|+|.|+|.|.|
T Consensus 5 ~~pp~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 84 (114)
T 2cqv_A 5 SSGPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLVEN 84 (114)
T ss_dssp CCCCEESCCCCSEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCCSSSEEEEECSSEEEEEETTCCTTTCEEEEEEEEC
T ss_pred CCCCEEEeCCCCeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhcCEEEEEEEEE
Confidence 34688888888899999999999999999999999999999999988889888877778999999999999999999999
Q ss_pred CCceeeEEEEEEEEcCCCCCC
Q psy7042 2165 KGGVKSTKAELIIMTAPKFNV 2185 (2245)
Q Consensus 2165 ~~G~~~~~~~l~V~~~p~~~~ 2185 (2245)
..|..+..+.|.|..+|....
T Consensus 85 ~~g~~~~~~~l~V~~~p~~P~ 105 (114)
T 2cqv_A 85 KLGSRQAQVNLTVVDKPDPPA 105 (114)
T ss_dssp SSCEEECCEEEEEECSCSCCC
T ss_pred CCCcEEEEEEEEEECCCCCCC
Confidence 999999999999998776544
No 392
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.53 E-value=1.7e-14 Score=162.82 Aligned_cols=170 Identities=15% Similarity=0.222 Sum_probs=118.6
Q ss_pred CCceEEcCCCeEEEEEEecCcC--CCeEEEeeC--CEecc----------------CCceEEEEe--cCcEEEEEEeeec
Q psy7042 1704 LKDLVVPLGKLLTLQCEATGTP--VPKCRWLRN--GREIS----------------SGARYRVET--AGGVFRLHFNEVT 1761 (2245)
Q Consensus 1704 ~~~~~~~~G~~v~L~C~~~~~p--~~~v~W~~~--~~~l~----------------~~~~~~~~~--~~~~~~L~i~~v~ 1761 (2245)
+..+.+.+|++++|.|.+.+.+ .+.+.|+|+ +..+. ...|+.+.. .++..+|.|.+++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 86 (210)
T 3d9a_H 7 SGPSLVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVT 86 (210)
T ss_dssp ESCSEECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CCCEEecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCCC
Confidence 3457899999999999998865 478999985 22210 135666654 3356789999999
Q ss_pred cCCCeEEEEEEecCceeeEEEEEEEecC----CCccccCCCceEEcCCCeEEEEEEEecc-CCc-EEEEEECCEEeecCC
Q psy7042 1762 DVDNGDYTCEAYNSVGFAHTSSRVKIGT----PPRIDRMPNALYIPEGDNTKVKIFYAGD-QPM-EVSLTKNGRVVQSDD 1835 (2245)
Q Consensus 1762 ~~d~G~Y~C~~~n~~g~~~~~~~l~V~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~v~W~~~g~~l~~~~ 1835 (2245)
.+|+|.|.|.+.|.. .......|.|.. +|.+...+....+.+|+.++|.|.+.|. |.+ .++|+++|..+....
T Consensus 87 ~~D~G~Y~C~~~~~~-~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~ 165 (210)
T 3d9a_H 87 TEDTATYYCANWDGD-YWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHT 165 (210)
T ss_dssp GGGCEEEEEEETTSS-CBCCCEEEEECCCCCBCCEEEEECCTTSCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEE
T ss_pred cccCEEEEEEEecCc-ccccceEEEeccCCCCCCEEEEecCCcccccCCcEEEEEEEeeEecCCcEEEEeeCCcccceEE
Confidence 999999999999863 112234666653 4555443333446789999999999987 877 999999987532110
Q ss_pred ceEEEEcC---CeEEEEEcccCcccceEEEEEEEcCCeeeEEE
Q psy7042 1836 RFKFTVLD---DYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGT 1875 (2245)
Q Consensus 1836 ~~~~~~~~---~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 1875 (2245)
.......+ ....|.|..+..+| |.|+|.|.|..|.....
T Consensus 166 ~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~ 207 (210)
T 3d9a_H 166 FPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVD 207 (210)
T ss_dssp CCCEEETTEEEEEEEEEEEGGGTTT-SCCEEEEEEGGGTEEEE
T ss_pred cCCccCCCcEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCcccc
Confidence 00011111 12468899888877 99999999999876544
No 393
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.53 E-value=2.4e-14 Score=162.59 Aligned_cols=168 Identities=16% Similarity=0.232 Sum_probs=118.1
Q ss_pred cCCceEEcCCCeEEEEEEecCc-------CCCeEEEeeCCEec-----------------cCCceEEEEec--CcEEEEE
Q psy7042 1703 PLKDLVVPLGKLLTLQCEATGT-------PVPKCRWLRNGREI-----------------SSGARYRVETA--GGVFRLH 1756 (2245)
Q Consensus 1703 ~~~~~~~~~G~~v~L~C~~~~~-------p~~~v~W~~~~~~l-----------------~~~~~~~~~~~--~~~~~L~ 1756 (2245)
.+..+.+.+|++++|.|.+.+. +.+.+.|+|++... ....|+.+..+ .+..+|.
T Consensus 6 ~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~ 85 (214)
T 2zg1_A 6 VQKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSLS 85 (214)
T ss_dssp CCSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCEE
T ss_pred CCcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEEE
Confidence 3566889999999999998754 56789999987531 11245555432 2455699
Q ss_pred EeeeccCCCeEEEEEEecCceeeE----EEEEEEecCC---CccccCCCceEEcCCCeEEEEEEEecc----CCcEEEEE
Q psy7042 1757 FNEVTDVDNGDYTCEAYNSVGFAH----TSSRVKIGTP---PRIDRMPNALYIPEGDNTKVKIFYAGD----QPMEVSLT 1825 (2245)
Q Consensus 1757 i~~v~~~d~G~Y~C~~~n~~g~~~----~~~~l~V~~~---p~~~~~~~~~~~~~g~~~~l~C~~~~~----p~~~v~W~ 1825 (2245)
|.+++.+|+|.|.|.+.+..+... ..+.|.|..+ |.+.. +. .+.+|+.++|.|.+.+. |.+.++|+
T Consensus 86 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~-~~--~~~~G~~v~L~C~~~~~~~~~p~p~v~W~ 162 (214)
T 2zg1_A 86 IGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHF-LE--PLESGRPTRLSCSLPGSCEAGPPLTFSWT 162 (214)
T ss_dssp ECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC---C--CCCTTCCEEEEEECTTCCSCSSCCEEEEE
T ss_pred EccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceec-Cc--cccCCCeEEEEEEeccCCCCCCCceEEEe
Confidence 999999999999999998763222 3567777663 44433 22 26789999999999874 78999999
Q ss_pred ECCEEeecCCceEEEEcCCeEEEEEcccCcccceEEEEEEEcCCeee--EEEEEEE
Q psy7042 1826 KNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV--SGTFTIN 1879 (2245)
Q Consensus 1826 ~~g~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~--~~~~~l~ 1879 (2245)
+++..+.... ......|.|..+..+|.|.|+|.|.|..+.. +..+.|.
T Consensus 163 ~~~~~~~~~~------~~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~~~~~~~v~l~ 212 (214)
T 2zg1_A 163 GNALSPLDPE------TTRSSELTLTPRPEDHGTNLTCQMKRQGAQVTTERTVQLN 212 (214)
T ss_dssp SSTTSSSCSS------CCCSSEEEECCCTTCCSCEEEEEEECC----CCEEEEECC
T ss_pred CCCCccCCCC------ceeEEEEEEecccHHcCcEEEEEEEeCCCCcceEEEEEEE
Confidence 9986542211 1233579999999999999999999987544 4444443
No 394
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.52 E-value=4.9e-14 Score=166.24 Aligned_cols=198 Identities=15% Similarity=0.151 Sum_probs=118.1
Q ss_pred CCCCeEEEEEEEEcCCCcCCCCCcCcceEEeeecCCCCCceeccCCceEEcCCCeEEEEEEecCcCCCeEEEeeC--CEe
Q psy7042 1660 VEGNDYEFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRN--GRE 1737 (2245)
Q Consensus 1660 ~~~d~g~y~c~a~n~~g~~~~~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~--~~~ 1737 (2245)
++.|.+.|.|.|.|..|..... ....+..++..+.+.+|++++|.|.+.+ +.+.+.|+|. +..
T Consensus 4 ~~~~~~~y~~~~~~~~g~~~~~--------------~~~~v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~ 68 (270)
T 3qib_D 4 ERADLIAYLKQATKGGGGSGGG--------------GGMKVIQTPRYLVKGQGQKAKMRCIPEK-GHPVVFWYQQNKNNE 68 (270)
T ss_dssp --------------------------------------CCCEEECSEEEEETTSCEEEEEECCT-TCCEEEEEEECTTCC
T ss_pred hhhhHHHHHHHHhccCCccccc--------------cceeEEeCCCeEEEcCCCCEEEEEEecC-CCceEEEEEECCCCC
Confidence 4678899999999887654322 2345566677789999999999999866 6678999982 211
Q ss_pred c------------cCC---c-eEEEEe-cCcEEEEEEeeeccCCCeEEEEEEecCc----eeeEEEEEEEecC------C
Q psy7042 1738 I------------SSG---A-RYRVET-AGGVFRLHFNEVTDVDNGDYTCEAYNSV----GFAHTSSRVKIGT------P 1790 (2245)
Q Consensus 1738 l------------~~~---~-~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~~~n~~----g~~~~~~~l~V~~------~ 1790 (2245)
+ ... . |+.+.. ..+..+|.|.+++.+|+|.|.|.+.+.. ........|.|.. +
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~ 148 (270)
T 3qib_D 69 FKFLINFQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLEDLKNVFP 148 (270)
T ss_dssp EEEEEEEETTEEEEECHHHHHHEEEECCTTSCEEEEESSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEESCSTTCBC
T ss_pred cEEEEEECCCCceecCCccCCcEEEEeCCCcEEEEEECCCCHhHCeEEEEEEecCCCccceEECCcEEEEEccccccccC
Confidence 1 000 1 555543 3457789999999999999999998642 2222335666655 4
Q ss_pred Ccccc-CCCceEEcCCCeEEEEEEEec-cCCc-EEEEEECCEEeecCCceEE---E-----EcCC---eEEEEEcccCcc
Q psy7042 1791 PRIDR-MPNALYIPEGDNTKVKIFYAG-DQPM-EVSLTKNGRVVQSDDRFKF---T-----VLDD---YIIIFIKEIRKE 1856 (2245)
Q Consensus 1791 p~~~~-~~~~~~~~~g~~~~l~C~~~~-~p~~-~v~W~~~g~~l~~~~~~~~---~-----~~~~---~~~l~i~~~~~~ 1856 (2245)
|.+.. .+....+..|+.++|.|.+.| .|.+ .+.|+|+|+.+........ . ..+. ...|.|.....+
T Consensus 149 P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~ 228 (270)
T 3qib_D 149 PEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQ 228 (270)
T ss_dssp CEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESCTTSSSCCEEEEEEEEEEHHHHH
T ss_pred CceEEECCCccccccCCceEEEEEecceeCCCeEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhc
Confidence 54332 233334456999999999998 5656 8999999998864321100 0 0011 135788888777
Q ss_pred c-ceEEEEEEEcCCeee
Q psy7042 1857 D-AGDYTVNLSNSSGSV 1872 (2245)
Q Consensus 1857 d-~G~Y~C~a~n~~g~~ 1872 (2245)
| .|.|+|.|.|.....
T Consensus 229 d~~g~YtC~v~~~~l~~ 245 (270)
T 3qib_D 229 NPRNHFRCQVQFYGLSE 245 (270)
T ss_dssp STTCEEEEEEEECCBCT
T ss_pred cCCCeEEEEEEecCCCC
Confidence 7 999999999876543
No 395
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.52 E-value=2.4e-14 Score=163.24 Aligned_cols=173 Identities=14% Similarity=0.181 Sum_probs=121.0
Q ss_pred CceEEcCCCeEEEEEEecCcC--CCeEEEeeCC--Ee---c----------------cCCceEEEEec--CcEEEEEEee
Q psy7042 1705 KDLVVPLGKLLTLQCEATGTP--VPKCRWLRNG--RE---I----------------SSGARYRVETA--GGVFRLHFNE 1759 (2245)
Q Consensus 1705 ~~~~~~~G~~v~L~C~~~~~p--~~~v~W~~~~--~~---l----------------~~~~~~~~~~~--~~~~~L~i~~ 1759 (2245)
..+.+.+|++++|.|.+.+.+ .+.+.|+|+. .. + ....|+.+..+ .+..+|+|.+
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 87 (222)
T 1q9r_B 8 GGGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMNT 87 (222)
T ss_dssp CCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEECS
T ss_pred CceeEcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEECc
Confidence 456789999999999998765 6789999843 21 1 01246666543 4577899999
Q ss_pred eccCCCeEEEEEEecCce-----eeEEEEEEEecC----CCccccCCCceEEcCCCeEEEEEEEecc-CCc-EEEEEECC
Q psy7042 1760 VTDVDNGDYTCEAYNSVG-----FAHTSSRVKIGT----PPRIDRMPNALYIPEGDNTKVKIFYAGD-QPM-EVSLTKNG 1828 (2245)
Q Consensus 1760 v~~~d~G~Y~C~~~n~~g-----~~~~~~~l~V~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~v~W~~~g 1828 (2245)
++.+|+|.|.|.+.+..+ .......|.|.. +|.+...+....+.+|+.++|.|.+.|. |.+ .|.|+++|
T Consensus 88 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g 167 (222)
T 1q9r_B 88 LRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGS 167 (222)
T ss_dssp CCGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEECCCSCCCCSSEEEEEEEEEEEBSSCCEEEEGGGT
T ss_pred CCcccCeEEEEEEeccCCcccceEeCCceEEEeccCCCCCCeEEEccccccccCCCcEEEEEEEccEECCCCEEEEecCC
Confidence 999999999999998654 222345676654 4555433333345689999999999986 887 99999998
Q ss_pred EEeecCCceEEEEcC---CeEEEEEcccCcccceEEEEEEEcCCeeeEEEEEE
Q psy7042 1829 RVVQSDDRFKFTVLD---DYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTI 1878 (2245)
Q Consensus 1829 ~~l~~~~~~~~~~~~---~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 1878 (2245)
+.+...........+ ....|.|.++..+| |.|+|.|.|..|.......+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~~~~~~~i 219 (222)
T 1q9r_B 168 LSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKI 219 (222)
T ss_dssp BCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEEEC
T ss_pred eEcceEeccccccCCcEEEEEEEEECchhcCC-CeEEEEEEccCCCCcEEEec
Confidence 765321100111111 12368999999899 99999999999976555443
No 396
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.52 E-value=7.5e-14 Score=162.28 Aligned_cols=175 Identities=15% Similarity=0.183 Sum_probs=123.7
Q ss_pred ceeccCCceEEcCCCeEEEEEEecCcCCCeEEEee----------------CCEeccCC---ceEEEEe-cCcEEEEEEe
Q psy7042 1699 DFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLR----------------NGREISSG---ARYRVET-AGGVFRLHFN 1758 (2245)
Q Consensus 1699 ~~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~----------------~~~~l~~~---~~~~~~~-~~~~~~L~i~ 1758 (2245)
.+...+..+.+.+|++++|.|.+.+.+.+.+.|+| ++...... .|+.+.. ..+..+|.|.
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~ 82 (246)
T 4dzb_B 3 VVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVT 82 (246)
T ss_dssp CEEEECSEEEEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEEC
T ss_pred ccEECCcEEEEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEEC
Confidence 34556677889999999999999998999999998 33322222 5666554 3567789999
Q ss_pred eeccCCCeEEEEEEecCce----eeEEEEEEEecC------CCccc-cCCCceEEcCCCeEEEEEEEeccCCc--EEEEE
Q psy7042 1759 EVTDVDNGDYTCEAYNSVG----FAHTSSRVKIGT------PPRID-RMPNALYIPEGDNTKVKIFYAGDQPM--EVSLT 1825 (2245)
Q Consensus 1759 ~v~~~d~G~Y~C~~~n~~g----~~~~~~~l~V~~------~p~~~-~~~~~~~~~~g~~~~l~C~~~~~p~~--~v~W~ 1825 (2245)
+++.+|+|.|.|.+.+..+ .......|.|.. +|.+. ..+....+.+|+.++|.|.+.|.|++ .++|+
T Consensus 83 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~ 162 (246)
T 4dzb_B 83 SAHPEDSSFYICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWW 162 (246)
T ss_dssp SCCGGGCEEEEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEE
T ss_pred CCCHHHCEEEEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeecCCchhccCCCcEEEEEEEccCcCCceEEEEE
Confidence 9999999999999987543 222334566653 45443 33444456679999999999997654 89999
Q ss_pred ECCEEeecCCceEEEE-------cCCe----EEEEEcccCccc-ceEEEEEEEcCCeeeE
Q psy7042 1826 KNGRVVQSDDRFKFTV-------LDDY----IIIFIKEIRKED-AGDYTVNLSNSSGSVS 1873 (2245)
Q Consensus 1826 ~~g~~l~~~~~~~~~~-------~~~~----~~l~i~~~~~~d-~G~Y~C~a~n~~g~~~ 1873 (2245)
++|..+.......... .++. ..|.|.....+| .|.|+|.|.|......
T Consensus 163 k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~~~~~ 222 (246)
T 4dzb_B 163 VNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 222 (246)
T ss_dssp ETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCTT
T ss_pred ECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEecCCCCc
Confidence 9999886532111000 0111 348888888888 9999999999865443
No 397
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.52 E-value=3.1e-14 Score=152.69 Aligned_cols=153 Identities=12% Similarity=0.114 Sum_probs=110.9
Q ss_pred ceEEcCCCeEEEEEEecCcCCCeEEEeeCCEeccC------------CceEEEEecCcEEEEEEeeeccCCCeEEEEEEe
Q psy7042 1706 DLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISS------------GARYRVETAGGVFRLHFNEVTDVDNGDYTCEAY 1773 (2245)
Q Consensus 1706 ~~~~~~G~~v~L~C~~~~~p~~~v~W~~~~~~l~~------------~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~ 1773 (2245)
.+.+.+|++|+|.|.+.+ |.+.|.|+|++..+.. ..|+.+...+ .+|.|.+++.+|+|.|+|.+.
T Consensus 4 ~v~~~~G~~VtL~c~~~~-~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~--~sL~I~~v~~~DsG~Y~C~~~ 80 (171)
T 1ccz_A 4 QIYGVVYGNVTFHVPSNV-PLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVS--GSLTIYNLTSSDEDEYEMESP 80 (171)
T ss_dssp EEEEETTCCEEECCCCSS-CCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTT--CCEEECSCCGGGCEEEEEECT
T ss_pred EEEEEcCCCEEEcCCCCC-CcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCC--CeEEECCCChhhCceEEEEEe
Confidence 467889999999999854 7889999998865421 1233332222 359999999999999999999
Q ss_pred cCceeeEEEEEEEecCCCccccCCCceEEcCCCeEEEEEEEeccCCcEEEEEECCEEeecCCceEEEEcCCeEEEEEccc
Q psy7042 1774 NSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEI 1853 (2245)
Q Consensus 1774 n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~l~i~~~ 1853 (2245)
|..| ...+.|.|..++.. ..+..... ...|.|.+.+.|.+.++|+++|..+...... .|.+.
T Consensus 81 n~~~--~~~~~L~V~~~~~~----p~i~~~~~-~~~L~C~~~~~p~p~i~W~~~~~~l~~~~~~---------~l~~~-- 142 (171)
T 1ccz_A 81 NITD--TMKFFLYVLEMVSK----PMIYWECS-NATLTCEVLEGTDVELKLYQGKEHLRSLRQK---------TMSYQ-- 142 (171)
T ss_dssp TCCS--CEEEEEEEECCCCC----CEEEEETT-TTEEEEECSSCSSCEEEEEETTEEEEEESSS---------EEEEE--
T ss_pred CCCC--cEEEEEEEECcCCC----CEEEEecC-CcEEEEEeCCCCCcEEEEEECCEECcCCcce---------EEEEe--
Confidence 8877 56778888765321 11111111 1379999999999999999999988643322 23333
Q ss_pred CcccceEEEEEEEcCCeeeEEEEEEE
Q psy7042 1854 RKEDAGDYTVNLSNSSGSVSGTFTIN 1879 (2245)
Q Consensus 1854 ~~~d~G~Y~C~a~n~~g~~~~~~~l~ 1879 (2245)
...|+|.|+|.|.|..|..+..+.|.
T Consensus 143 ~~~~~g~Y~C~a~N~~~~~~~~~~l~ 168 (171)
T 1ccz_A 143 WTNLRAPFKCKAVNRVSQESEMEVVN 168 (171)
T ss_dssp CSCCSSCEEEEEEETTEEEEEEECCC
T ss_pred ccCCCceEEEEEEcccCcccceeEEe
Confidence 36789999999999999887776553
No 398
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.52 E-value=3.6e-14 Score=161.65 Aligned_cols=183 Identities=12% Similarity=0.100 Sum_probs=120.7
Q ss_pred CCceEEcCCCeEEEEEEecCcC--CCeEEEeeCC--Eec------c-----------CCceEEEEec--CcEEEEEEeee
Q psy7042 1704 LKDLVVPLGKLLTLQCEATGTP--VPKCRWLRNG--REI------S-----------SGARYRVETA--GGVFRLHFNEV 1760 (2245)
Q Consensus 1704 ~~~~~~~~G~~v~L~C~~~~~p--~~~v~W~~~~--~~l------~-----------~~~~~~~~~~--~~~~~L~i~~v 1760 (2245)
+..+.+.+|++++|.|.+.+.+ .+.+.|+|++ ..+ . ...|+.+..+ .+..+|+|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (227)
T 1mju_H 7 PGAELVKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLSSL 86 (227)
T ss_dssp CSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeEEcCCCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEECCC
Confidence 3457899999999999998776 6789999853 211 0 1246666543 46788999999
Q ss_pred ccCCCeEEEEEEecCceee-EEEEEEEecC----CCccccCCCceEEcCCCeEEEEEEEecc-CCc-EEEEEECCEEeec
Q psy7042 1761 TDVDNGDYTCEAYNSVGFA-HTSSRVKIGT----PPRIDRMPNALYIPEGDNTKVKIFYAGD-QPM-EVSLTKNGRVVQS 1833 (2245)
Q Consensus 1761 ~~~d~G~Y~C~~~n~~g~~-~~~~~l~V~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~v~W~~~g~~l~~ 1833 (2245)
+.+|+|.|.|.+.+..+.. .....|.|.. +|.+........+.+|+.++|.|.+.|. |.+ .|.|+++|..+..
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~ 166 (227)
T 1mju_H 87 TSDDSAVYYCANKLGWFPYWGQGTLVTVSAAKTTAPSVYPLAPVCGDTSGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGV 166 (227)
T ss_dssp CGGGCEEEEEEEEETTEEEECCCEEEEECSSCCBCCEEEEECCCC------CEEEEEEEEEEBSSCCEEEEGGGTBCTTE
T ss_pred CcccCEEEEEEECCCCceEEcCcEEEEEcCCCCCCCEEEEecCCccccCCCcEEEEEEeecEeCCCeEEEEecCCCcCCc
Confidence 9999999999998864321 1235777764 3544432223346689999999999986 766 9999999876421
Q ss_pred CCceEEEEcC---CeEEEEEcccCcccceEEEEEEEcCCeeeEEEEEEEEeCCCCCC
Q psy7042 1834 DDRFKFTVLD---DYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPP 1887 (2245)
Q Consensus 1834 ~~~~~~~~~~---~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~ 1887 (2245)
.........+ ....|.|..+..+| |.|+|.|.|..+.......+.+..+|..|
T Consensus 167 ~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~~~~~~~p~~~ 222 (227)
T 1mju_H 167 HTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRGPTIKP 222 (227)
T ss_dssp EECCCEEETTEEEEEEEEEECTTTTTT-SCCEEEEEEGGGTEEEEEECCCCCC----
T ss_pred EECCceecCCeEEEEEEEEEchhhcCC-CeEEEEEEECCCCcceEEEeCCCCCCCCC
Confidence 1000000111 12478999988888 99999999988877777777666555443
No 399
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.52 E-value=1e-13 Score=138.24 Aligned_cols=113 Identities=15% Similarity=0.279 Sum_probs=93.8
Q ss_pred ccCCCcCCCCcccccCcccCCCceEEee---ccceeeecCccEEEEEEEEeeCCCeEEEeeCCEeeCCCCcEEEEEeCcE
Q psy7042 2066 GLSLPSSASNSVQIKDPMAAKAPEIIVP---LRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDT 2142 (2245)
Q Consensus 2066 g~~~~~~~s~~v~~~~~~~~~~p~~~~~---~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~ 2142 (2245)
|.+.++..+..+.+. ....+|.|... .....+.+|+.+.|.|.+.|.|.|.|.|+|+|..+. ..++.+...+..
T Consensus 2 G~s~p~~~~~~v~~~--~v~~~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~-~~~~~~~~~~~~ 78 (118)
T 2e7c_A 2 SSGSSGTLAQPVTIR--EIAEPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLD-TSRVHVRTSDFD 78 (118)
T ss_dssp CCCCCCCCCCCCCCC--CCSEEEEECCCTTTSSCEEEESSSCEEEEEEEEEESCCEEEEEETTEECC-CSSCEEEECSSE
T ss_pred CcCCccccCCCEEEE--eeccCCeEecCcccCCCEEEECCCEEEEEEEEccCCCCEEEEEECCEECC-CCcEEEEECCCe
Confidence 555556555555443 33456887653 456789999999999999999999999999999997 566777777777
Q ss_pred EEEEEcCCCCCCCeEEEEEEEeCCceeeEEEEEEEEcCC
Q psy7042 2143 YTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAP 2181 (2245)
Q Consensus 2143 ~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~p 2181 (2245)
..|.|.++..+|+|.|+|.|.|.+|..+..+.|.|..+|
T Consensus 79 ~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~P 117 (118)
T 2e7c_A 79 TVFFVRQAARSDSGEYELSVQIENMKDTATIRIRVVEKA 117 (118)
T ss_dssp EEEEESSCCTTTCEEEEEEEECSSCEECCEEEEEEECCC
T ss_pred EEEEECCCChhcCEEEEEEEEeCCCeEEEEEEEEEEcCC
Confidence 889999999999999999999999999999999998766
No 400
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.52 E-value=1.7e-13 Score=147.91 Aligned_cols=156 Identities=12% Similarity=0.066 Sum_probs=115.5
Q ss_pred eEEcCCCeEEEEEEecCcCCC--eEEEeeCCEeccCCceEEEEecCcEEEEEEeeeccCCCeEEEEEEecCceeeEEEEE
Q psy7042 1707 LVVPLGKLLTLQCEATGTPVP--KCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSR 1784 (2245)
Q Consensus 1707 ~~~~~G~~v~L~C~~~~~p~~--~v~W~~~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~ 1784 (2245)
+.+..|++++|.|.+ +.|.| .|+|++.+..+ .+... ......|.|.+++.+|+|.|.|.+.|..+.....+.
T Consensus 17 v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l---~~~~~--~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~ 90 (210)
T 1gsm_A 17 VAVALGASRQLTCRL-ACADRGASVQWRGLDTSL---GAVQS--DTGRSVLTVRNASLSAAGTRVCVGSCGGRTFQHTVQ 90 (210)
T ss_dssp EEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTT---CCEEE--ESSEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred eEEeCCCCEEEEEEC-CCCCCCcceEEeeccccc---CcEEe--cCCccEEEECccCcccCceEEEEEEeCCCceEEEEE
Confidence 689999999999999 88877 99999865444 22222 345567999999999999999999999998888999
Q ss_pred EEecCCCccccCCCceEEcCCCeEEEEEEEecc-CC----cEEEEEECCEEeecCCceE--EEE----c--------CCe
Q psy7042 1785 VKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGD-QP----MEVSLTKNGRVVQSDDRFK--FTV----L--------DDY 1845 (2245)
Q Consensus 1785 l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~----~~v~W~~~g~~l~~~~~~~--~~~----~--------~~~ 1845 (2245)
|.|..+|........ ...+|+.+ |.|.+.+. |. +.|.|+|||+.|....... ... . .-.
T Consensus 91 ltV~~~P~~~~i~~~-~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vt 168 (210)
T 1gsm_A 91 LLVYAFPNQLTVSPA-ALVPGDPE-VACTAHKVTPVDPNALSFSLLVGGQELEGAQALGPEVQEEEEEPQGDEDVLFRVT 168 (210)
T ss_dssp EEEEBCCSEEEEESS-SBCTTCCE-EEEEEEEEBCCCTTTEEEEEEETTEECTTCEECCCEEEECTTCCSSCCCCCEEEE
T ss_pred EEEEecCCCcEEccc-eEEeCCce-EEEEeCCCCCCCCCCcEEEEEECCEEcccccccccceecccccccCCcceEEEEE
Confidence 999999875432222 56678888 99999985 63 5899999999985432101 100 0 011
Q ss_pred EEEEEcccCcccceEEEEEEEcCCe
Q psy7042 1846 IIIFIKEIRKEDAGDYTVNLSNSSG 1870 (2245)
Q Consensus 1846 ~~l~i~~~~~~d~G~Y~C~a~n~~g 1870 (2245)
..|.+.....++.+.|+|.|.+..-
T Consensus 169 s~~~~~~~~~D~~~~~tC~a~~~L~ 193 (210)
T 1gsm_A 169 ERWRLPPLGTPVPPALYCQATMRLP 193 (210)
T ss_dssp EEEECCCCCSSCCSEEEEEEEEEET
T ss_pred EEEeecCCcccCCceEEEEEEeeCC
Confidence 2445556666666899999998753
No 401
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.51 E-value=2.7e-13 Score=161.11 Aligned_cols=166 Identities=14% Similarity=0.234 Sum_probs=122.8
Q ss_pred CCceEEcCCCeEEEEEEecCcC--CCeEEEeeCC--Eecc-----------------CCceEEEEe--cCcEEEEEEeee
Q psy7042 1704 LKDLVVPLGKLLTLQCEATGTP--VPKCRWLRNG--REIS-----------------SGARYRVET--AGGVFRLHFNEV 1760 (2245)
Q Consensus 1704 ~~~~~~~~G~~v~L~C~~~~~p--~~~v~W~~~~--~~l~-----------------~~~~~~~~~--~~~~~~L~i~~v 1760 (2245)
+..+.+.+|++++|.|.+.+.+ .+.+.|+|+. ..+. ...|+.+.. .++..+|.|.++
T Consensus 29 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 108 (291)
T 2gki_A 29 SGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSL 108 (291)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEEECSC
T ss_pred CCcEEecCCCCEEEEEeccCCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEEECcC
Confidence 3468899999999999998766 5789999853 1110 123444443 345778999999
Q ss_pred ccCCCeEEEEEEecCc-e--e--eEEEEEEEecC----------------CCccccCCCceEEcCCCeEEEEEEEeccCC
Q psy7042 1761 TDVDNGDYTCEAYNSV-G--F--AHTSSRVKIGT----------------PPRIDRMPNALYIPEGDNTKVKIFYAGDQP 1819 (2245)
Q Consensus 1761 ~~~d~G~Y~C~~~n~~-g--~--~~~~~~l~V~~----------------~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~ 1819 (2245)
+.+|+|.|.|.+.|.. | . ......|.|.. ++.+...+..+.+.+|++++|.|.+.+.+.
T Consensus 109 ~~~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~ 188 (291)
T 2gki_A 109 TSEDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSPSSLAVSAGEKVTMSCKSSQSLF 188 (291)
T ss_dssp CGGGCEEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECSCSEEEEETTSCEEEEEEESSCCE
T ss_pred CHHHCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcCCCEEEEcCCCcEEEEEEcCCccc
Confidence 9999999999999874 2 1 11234677766 344555677788999999999999998876
Q ss_pred c------EEEEEEC--CE---Eeec---------CCceEEEEcCCeEEEEEcccCcccceEEEEEEEcCC
Q psy7042 1820 M------EVSLTKN--GR---VVQS---------DDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSS 1869 (2245)
Q Consensus 1820 ~------~v~W~~~--g~---~l~~---------~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~ 1869 (2245)
+ .+.|+|+ |+ .+.. ..++..........|.|.++..+|+|.|+|.|.|..
T Consensus 189 ~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~ 258 (291)
T 2gki_A 189 NSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQSYYH 258 (291)
T ss_dssp ETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred cccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEEECCCCHHHCEEEEEEEccCC
Confidence 5 8999996 32 2211 345555555566789999999999999999999864
No 402
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.51 E-value=1.8e-14 Score=162.92 Aligned_cols=176 Identities=12% Similarity=0.150 Sum_probs=115.8
Q ss_pred CCCceeccCCceE--EcCCCeEEEEEEecCc---CC-CeEEEeeCCEeccCCceEEE-EecC----cEEEEEEeeeccCC
Q psy7042 1696 EKPDFIVPLKDLV--VPLGKLLTLQCEATGT---PV-PKCRWLRNGREISSGARYRV-ETAG----GVFRLHFNEVTDVD 1764 (2245)
Q Consensus 1696 ~~p~~~~~~~~~~--~~~G~~v~L~C~~~~~---p~-~~v~W~~~~~~l~~~~~~~~-~~~~----~~~~L~i~~v~~~d 1764 (2245)
.+|.+...+.... +.+|++++|.|.+.|. |. +.|.|+|++..+........ ...+ ....|.|.+++.+|
T Consensus 8 ~~p~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D 87 (218)
T 2rgs_A 8 GGPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWMS 87 (218)
T ss_dssp -CCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHHHHHT
T ss_pred CCCEEEEECcCHHHhhccCCCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHHHcCC
Confidence 3455544333333 7899999999999876 33 78999999987754322111 1111 23469999999999
Q ss_pred CeEEEEEEecCceee--EEEEEE--EecCCCccccCCCceEEcCCCeEEEEEEEec-cCCc-EEEEEECCEEeecCCceE
Q psy7042 1765 NGDYTCEAYNSVGFA--HTSSRV--KIGTPPRIDRMPNALYIPEGDNTKVKIFYAG-DQPM-EVSLTKNGRVVQSDDRFK 1838 (2245)
Q Consensus 1765 ~G~Y~C~~~n~~g~~--~~~~~l--~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~v~W~~~g~~l~~~~~~~ 1838 (2245)
+|.|+|.+.|..+.. ...+.+ .+..+|.+...+......+|+.+.|.|.+.| +|.+ .|+|+|+|..+.......
T Consensus 88 ~g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~ 167 (218)
T 2rgs_A 88 GKEFKCKVNNKDLPSPIERTISKIKGLVRAPQVYILPPPAEQLSRKDVSLTCLVVGFNPGDISVEWTSNGHTEENYKDTA 167 (218)
T ss_dssp TCCEEEEEEETTCSSCEEEEECCCCCCCBCCEEEEECCCGGGTTSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECC
T ss_pred CCeEEEEEECCcCCCcceEEEeecCCCCCCCEEEEECCChHHhcCCceEEEEEEEeeeCCCcEEEEEECCEeccCceecc
Confidence 999999999987643 333322 4566777654433322335999999999999 5665 999999999874321111
Q ss_pred EEEcCCe-----EEEEEcccCcccceEEEEEEEcCCee
Q psy7042 1839 FTVLDDY-----IIIFIKEIRKEDAGDYTVNLSNSSGS 1871 (2245)
Q Consensus 1839 ~~~~~~~-----~~l~i~~~~~~d~G~Y~C~a~n~~g~ 1871 (2245)
.....++ ..|.|.....+|.|.|+|.|.|....
T Consensus 168 ~~~~~~gt~~~~s~l~v~~~~~~d~g~YtC~a~n~~l~ 205 (218)
T 2rgs_A 168 PVLDSDGSYFIYSKLNMKTSKWEKTDSFSCNVRHEGLK 205 (218)
T ss_dssp CEECTTSCEEEEEEEEEEHHHHHHCSCEEEEEECTTSG
T ss_pred cEECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCC
Confidence 1112221 23555555556799999999998653
No 403
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.51 E-value=9.6e-14 Score=136.08 Aligned_cols=98 Identities=27% Similarity=0.529 Sum_probs=90.3
Q ss_pred cCCCceEEeeccceeeecCccEEEEEEEEeeCCCeEEEeeCCEeeCCCCcEEEEEeCcEEEEEEcCCCCCCCeEEEEEEE
Q psy7042 2084 AAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAV 2163 (2245)
Q Consensus 2084 ~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 2163 (2245)
...+|.|...+.+..+.+|+.++|.|.+.|.|.|.|.|+|+|..+....++.+..++....|.|.++..+|+|.|+|.|.
T Consensus 10 ~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 89 (107)
T 3irg_B 10 QGSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRAR 89 (107)
T ss_dssp CCEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCCCeeEcCCccEEEeCCCeEEEEEEEeecCCCEEEEEECCeECCCCCcEEEEeCCCEEEEEEccCCHHhCEEEEEEEE
Confidence 44579999999999999999999999999999999999999999998889999888988899999999999999999999
Q ss_pred eCCceeeEEEEEEEEcCC
Q psy7042 2164 NKGGVKSTKAELIIMTAP 2181 (2245)
Q Consensus 2164 N~~G~~~~~~~l~V~~~p 2181 (2245)
|..|..+..+.|.|..+|
T Consensus 90 n~~g~~~~~~~l~V~~~P 107 (107)
T 3irg_B 90 NAAGEAYAAAAVTVLEPP 107 (107)
T ss_dssp ETTEEEEEEEEEEEEC--
T ss_pred cCCCcEEEEEEEEEEcCC
Confidence 999999999999998765
No 404
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.51 E-value=3.6e-14 Score=135.26 Aligned_cols=94 Identities=18% Similarity=0.332 Sum_probs=86.7
Q ss_pred CCCceEEeeccceeeecCccEEEEEEEEeeCCCeEEEeeCCEeeCCCCcEEEEEeCcEEEEEEcCCCCCCCeEEEEEEEe
Q psy7042 2085 AKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVN 2164 (2245)
Q Consensus 2085 ~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N 2164 (2245)
..+|.|...+.++++.+|+.+.|.|.+ .|.|.|+|+|||..|..+.++.+..++....|.|.++..+|+|.|+|.|.|
T Consensus 5 ~~p~~~~~~~~~~~v~~G~~v~l~C~v--~p~p~v~W~k~g~~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 82 (100)
T 2yuz_A 5 SSGLKILTPLTDQTVNLGKEICLKCEI--SENIPGKWTKNGLPVQESDRLKVVQKGRIHKLVIANALTEDEGDYVFAPDA 82 (100)
T ss_dssp SCCCCCSBCCCCEEEETTSCCCEEEEC--SSCCCEEEEETTEECCCCSSEEEEECSSEEEEEESSCCGGGCSEEEEEESS
T ss_pred CCCCEEeccCCceEEcCCCCEEEEEEe--CCCCeEEEEECCEECCCCCcEEEEEeCCEEEEEECCCChhhCEEEEEEEcC
Confidence 346888888999999999999999999 899999999999999999999999999889999999999999999999999
Q ss_pred CCceeeEEEEEEEEcCCC
Q psy7042 2165 KGGVKSTKAELIIMTAPK 2182 (2245)
Q Consensus 2165 ~~G~~~~~~~l~V~~~p~ 2182 (2245)
. ..+.++.|.|.++|.
T Consensus 83 ~--~~~~~a~L~V~~~P~ 98 (100)
T 2yuz_A 83 Y--NVTLPAKVHVISGPS 98 (100)
T ss_dssp S--CCCEEEEEEEECCSC
T ss_pred C--CeeEEEEEEEeCCCC
Confidence 8 567889999988765
No 405
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.51 E-value=7.3e-14 Score=163.56 Aligned_cols=172 Identities=12% Similarity=0.278 Sum_probs=112.1
Q ss_pred CCceeccCCceEEcCCCeEEEEEEecCcCCCeEEEeeC--CEec---cC-C--------------ceEEE-EecCcEEEE
Q psy7042 1697 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRN--GREI---SS-G--------------ARYRV-ETAGGVFRL 1755 (2245)
Q Consensus 1697 ~p~~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~--~~~l---~~-~--------------~~~~~-~~~~~~~~L 1755 (2245)
+|.+...+..+.+.+|++++|.|.+.+.+.+.+.|+|. +..+ .. . .++.. .......+|
T Consensus 2 s~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 81 (259)
T 3omz_A 2 SSNLEGRTKSVIRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRM 81 (259)
T ss_dssp ---------CEEEETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEE
T ss_pred ccccccCCceeEecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEE
Confidence 34566667789999999999999999988889999982 1111 00 0 11111 122345579
Q ss_pred EEeeeccCCCeEEEEEEecCce---eeEEEEEEEecC-----------------CCccccCCCceEEcCCCeEEEEEEEe
Q psy7042 1756 HFNEVTDVDNGDYTCEAYNSVG---FAHTSSRVKIGT-----------------PPRIDRMPNALYIPEGDNTKVKIFYA 1815 (2245)
Q Consensus 1756 ~i~~v~~~d~G~Y~C~~~n~~g---~~~~~~~l~V~~-----------------~p~~~~~~~~~~~~~g~~~~l~C~~~ 1815 (2245)
.|.+++.+|+|.|.|.+.|..+ .......|.|.. +|.+...+..+.+.+|++++|.|.+.
T Consensus 82 ~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~ 161 (259)
T 3omz_A 82 ILRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSSVSMPVRKAVTLNCLYE 161 (259)
T ss_dssp EESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCCCCEEEETTCCEEECCEEE
T ss_pred EECCCCcccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeCCEEEEcCCCCEEEEEECC
Confidence 9999999999999999998765 233345677765 35667777889999999999999998
Q ss_pred cc-CCcEEEEEECC--EE---ee---------cCCceEEEE--cCCeEEEEEcccCcccceEEEEEEEcC
Q psy7042 1816 GD-QPMEVSLTKNG--RV---VQ---------SDDRFKFTV--LDDYIIIFIKEIRKEDAGDYTVNLSNS 1868 (2245)
Q Consensus 1816 ~~-p~~~v~W~~~g--~~---l~---------~~~~~~~~~--~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 1868 (2245)
+. |.+.+.|+|++ .. +. ...++.+.. ......|.|.++..+|+|.|.|.+.+.
T Consensus 162 ~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 231 (259)
T 3omz_A 162 TSWWSYYIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISALQLEDSAKYFCALGES 231 (259)
T ss_dssp CCCSSCEEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESSCCGGGCSEEEEEEESC
T ss_pred CccCCceEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCCChhHCEEEEEEEeCc
Confidence 75 78899999843 11 10 123333321 133457999999999999999999853
No 406
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.50 E-value=8.4e-14 Score=130.24 Aligned_cols=90 Identities=19% Similarity=0.265 Sum_probs=81.8
Q ss_pred CCCceEEeeccceeeecCccEEEEEEEEeeCCCeEEEeeCCEeeCCCCcEEEEEeCcEEEEEEcCCCCCCCeEEEEEEEe
Q psy7042 2085 AKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVN 2164 (2245)
Q Consensus 2085 ~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N 2164 (2245)
..+|.|...+.++.+.+|+.|+|.|.+.| |+|.|.|+|||.+|..+.++.+..++....|.|.++..+|+|.|+|.|.|
T Consensus 3 ~~~~~~~~~~~~~~v~~G~~v~l~C~v~~-~~~~v~W~k~g~~i~~~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a~n 81 (93)
T 1waa_A 3 MALIEVEKPLYGVEVFVGETAHFEIELSE-PDVHGQWKLKGQPLAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAAN 81 (93)
T ss_dssp CCCCCEEECCCCEEEETTSCEEEEEEESS-SSCCCEEEETTEECCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEETT
T ss_pred CCCcEeeccCcceEEeCCCCEEEEEEECC-CCCeEEEEECCEECcCCCCEEEEEECCEEEEEECCCChhhCEEEEEEECC
Confidence 45799999999999999999999999986 66899999999999999999999999889999999999999999999998
Q ss_pred CCceeeEEEEEEEEc
Q psy7042 2165 KGGVKSTKAELIIMT 2179 (2245)
Q Consensus 2165 ~~G~~~~~~~l~V~~ 2179 (2245)
. ..++.|.|.+
T Consensus 82 ~----~~sa~L~V~~ 92 (93)
T 1waa_A 82 T----KSAANLKVKE 92 (93)
T ss_dssp E----EEEEEEEEEC
T ss_pred C----cEEEEEEEEc
Confidence 4 5678888864
No 407
>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A
Probab=99.50 E-value=2.3e-13 Score=153.75 Aligned_cols=194 Identities=14% Similarity=0.120 Sum_probs=138.8
Q ss_pred cCCCCCcccEEeee-eCceEEEEecCCCCCCCCccceEEEeeeecCC------CceEEec--ceeeeceEEEecCCCCce
Q psy7042 900 DRPHPPENLHADEF-AGDSLTLYWTPPRDNGGSEITNYVVEKKDYNS------TVWTKVS--SYVTTPFVRVRNLAIGST 970 (2245)
Q Consensus 900 ~~P~~p~~l~~~~~-~~~~~~l~W~~p~~~~g~~i~~y~i~~~~~~~------~~~~~~~--~~~~~~~~~i~~L~p~~~ 970 (2245)
.+|++|.+|.+... ..+++.++|+++.+. + ....|.|.++.... ..+.... .......+.+.+|.+++.
T Consensus 3 ~pP~~P~~l~c~~~~~~~~~~~~W~p~~~~-~-~~~~Y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~ 80 (215)
T 1cd9_B 3 YPPASPSNLSCLMHLTTNSLVCQWEPGPET-H-LPTSFILKSFRSRADCQYQGDTIPDCVAKKRQNNCSIPRKNLLLYQY 80 (215)
T ss_dssp CCCCCCEEEEEEEETTTTEEEEEEECCSCC-S-SCCEEEEEEEECCGGGCSCCCEEEEEECCTTCCEEEEEGGGCCTTSC
T ss_pred CCCCCCeeeeeecCCCcccEEEEecCCCCC-C-CceeEEEEEEecCCcccccccccccCCCCCCCcEEEECCcccccceE
Confidence 48899999999877 578999999998764 3 34579999986432 1233222 123456788889999999
Q ss_pred eeEEEEEEeccccCCCccccCcccccCCC-CCCCCCCCCeeEee------cCCeEEEEecCCCCCCCCccceEEEEEE-e
Q psy7042 971 YEFRVMAENQYGLSKPALTIDPIKAKHPF-DVPGAPGAPKGVDS------TEDSISLVWSKPRHDGGSPIQRYIVEKR-L 1042 (2245)
Q Consensus 971 y~~~v~a~n~~g~~~~s~~~~~~~~~t~~-~~p~~p~~~~~~~~------~~~~v~l~W~~p~~~~~~~i~~y~v~~~-~ 1042 (2245)
|.|+|.|.|..|.+... .+.+.+.. ..|.+|.++.+... +.+++.|+|++|.. ++..+.+|.|+|+ .
T Consensus 81 Y~~~V~A~N~~G~~~s~----~~~~~~~~~v~p~pP~~~~~~~~~~~~~~~~~~~~l~W~~p~~-~~~~~l~Y~v~y~~~ 155 (215)
T 1cd9_B 81 MAIWVQAENMLGSSESP----KLCLDPMDVVKLEPPMLQALDIGPDVVSHQPGCLWLSWKPWKP-SEYMEQECELRYQPQ 155 (215)
T ss_dssp EEEEEEEEETTEEEECC----CEEECGGGGBCCCCCEEEECCC-------CCSCEEEEEECCGG-GTTSCEEEEEEEEES
T ss_pred EEEEEEEECCCCCccCc----cEEEchHHceEeCCCcEEEEEEeccccCCCCCeEEEEEeCCCC-CCeEEEEEEEEEccC
Confidence 99999999999976322 23333222 35778888887765 67899999999875 3443479999999 6
Q ss_pred cCCccceeccccccCCcceeEEEEeecccccCCccCchhhhhhhhhcccccccccccCCcEEEEEEEEEecCCCCCCCCC
Q psy7042 1043 ISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSS 1122 (2245)
Q Consensus 1043 ~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~v~A~n~~G~~~~s~~ 1122 (2245)
.+...|....... ..... +.|.+|.|++.|.|+|+|.+..|.|.+|..
T Consensus 156 ~~~~~w~~~~~~~--~~~~~------------------------------~~l~~L~p~t~Y~~~Vra~~~~g~G~wS~w 203 (215)
T 1cd9_B 156 LKGANWTLVFHLP--SSKDQ------------------------------FELCGLHQAPVYTLQMRCIRSSLPGFWSPW 203 (215)
T ss_dssp STTCCCEEEEEEE--SCEEE------------------------------EEECCCCSCSCEEEEEEEEESSSCCCCCCC
T ss_pred CCCCCcEEEeccc--CcceE------------------------------EEEcCCCCCCEEEEEEEeeECCCCCCCcCC
Confidence 6666675432111 11111 269999999999999999999999988887
Q ss_pred CcceeecCCC
Q psy7042 1123 SDIIMCCAPP 1132 (2245)
Q Consensus 1123 ~~~~~~~~~p 1132 (2245)
+......++.
T Consensus 204 S~~~~~~T~e 213 (215)
T 1cd9_B 204 SPGLQLRPTM 213 (215)
T ss_dssp CCCEEECCCC
T ss_pred CCccceecCC
Confidence 7776665543
No 408
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.50 E-value=1.6e-13 Score=161.28 Aligned_cols=173 Identities=17% Similarity=0.251 Sum_probs=122.9
Q ss_pred CCCceeccCCceEEcCCCeEEEEEEecCcC-----CCeEEEeeCC--Ee---cc---------CCceEEEEecCcEEEEE
Q psy7042 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTP-----VPKCRWLRNG--RE---IS---------SGARYRVETAGGVFRLH 1756 (2245)
Q Consensus 1696 ~~p~~~~~~~~~~~~~G~~v~L~C~~~~~p-----~~~v~W~~~~--~~---l~---------~~~~~~~~~~~~~~~L~ 1756 (2245)
..+.+...+..+.+.+|++++|.|.+.+.+ .+.+.|+|+. .. +. ...|+.+...++..+|+
T Consensus 14 ~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~ 93 (268)
T 1x9q_A 14 SDVVMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTLK 93 (268)
T ss_dssp CCCCEEEECSEECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEE
T ss_pred ccceEEeeCCeEEecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEEE
Confidence 345666667778899999999999998876 4789999853 21 11 13577776667778899
Q ss_pred EeeeccCCCeEEEEEEecCceee-EEEEEEEecCCCc-----------------------cccCCCceEEcCCCeEEEEE
Q psy7042 1757 FNEVTDVDNGDYTCEAYNSVGFA-HTSSRVKIGTPPR-----------------------IDRMPNALYIPEGDNTKVKI 1812 (2245)
Q Consensus 1757 i~~v~~~d~G~Y~C~~~n~~g~~-~~~~~l~V~~~p~-----------------------~~~~~~~~~~~~g~~~~l~C 1812 (2245)
|.+++.+|+|.|.|.+.|..+.. .....|.|..++. ....+....+.+|++++|.|
T Consensus 94 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~p~~pp~~~~~~~~~~~~~~v~~~~~~~~~v~~G~~v~L~C 173 (268)
T 1x9q_A 94 INRVEAEDLGVYFCSQSTHVPWTFGGGTKLEIKSSADDAKKDAAKKDDAKKDDAKKDGGVKLDETGGGLVQPGGAMKLSC 173 (268)
T ss_dssp ESSCCGGGCEEEEEEECSSSSCEECCCEEEC------------------------CGGGCEEEEECCEEECTTCCEEEEE
T ss_pred ECCCChhHCEEEEEEEecCCCceEcCCEEEEEccCccCCCccccccccccccccccccceEEECCCceEecCCCcEEEEE
Confidence 99999999999999999875422 2234566654321 11223457889999999999
Q ss_pred EEeccCC--cEEEEEEC--CEEe---e----------------cCCceEEEEc--CCeEEEEEcccCcccceEEEEEEEc
Q psy7042 1813 FYAGDQP--MEVSLTKN--GRVV---Q----------------SDDRFKFTVL--DDYIIIFIKEIRKEDAGDYTVNLSN 1867 (2245)
Q Consensus 1813 ~~~~~p~--~~v~W~~~--g~~l---~----------------~~~~~~~~~~--~~~~~l~i~~~~~~d~G~Y~C~a~n 1867 (2245)
.+.+.++ +.+.|+|+ ++.+ . ...++.+... .....|.|.++..+|+|.|+|.|.|
T Consensus 174 ~~~~~~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~ 253 (268)
T 1x9q_A 174 VTSGFTFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQMNNLRVEDTGIYYCTGAS 253 (268)
T ss_dssp EEESSCGGGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred EecCccccccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEcc
Confidence 9998764 79999985 3221 1 1244554432 2356899999999999999999987
Q ss_pred C
Q psy7042 1868 S 1868 (2245)
Q Consensus 1868 ~ 1868 (2245)
.
T Consensus 254 ~ 254 (268)
T 1x9q_A 254 Y 254 (268)
T ss_dssp T
T ss_pred C
Confidence 5
No 409
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.50 E-value=6.6e-14 Score=161.18 Aligned_cols=169 Identities=17% Similarity=0.235 Sum_probs=116.3
Q ss_pred eecCCcceEEeCCCeEEEEEEEeeecCCceEEEECC--ee---c------------cCCCeEEEEE-cCcEEEEEEeeec
Q psy7042 93 FIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNG--RE---I------------SSGARYRVET-AGGVFRLHFNEVT 154 (2245)
Q Consensus 93 ~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g--~~---l------------~~~~~~~~~~-~~~~~~L~i~~~~ 154 (2245)
++..|..+.+.+|+.|+|.|.+. .+.+.|.|+|++ .. + ...+|+.+.. .++..+|.|.+++
T Consensus 2 v~q~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~ 80 (238)
T 1bec_A 2 VTQSPRNKVAVTGGKVTLSCQQT-NNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILELAT 80 (238)
T ss_dssp EEEECSEEEEETTCCEEEEEEES-SCCSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESSCC
T ss_pred cccCCCeeEEeCCCcEEEEEEeC-CCCceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEecCC
Confidence 44567788999999999999995 467889999853 21 1 0134666553 2456789999999
Q ss_pred cCCCeEEEEEEEcCcc---c--ceeEEEEEecC------CCeeec-CCCceEEcCCCeEEEEEEEecC-CC-ceEEEeeC
Q psy7042 155 DVDNGDYTCEAYNSVG---F--AHTSSRVKIGT------PPRIDR-MPNALYIPEGDNTKVKIFYAGD-QP-MEVSLTKN 220 (2245)
Q Consensus 155 ~~d~G~Y~C~a~n~~g---~--~~~~~~l~V~~------~P~~~~-~~~~~~v~~G~~~~l~C~~~g~-p~-~~i~W~~~ 220 (2245)
.+|+|.|.|.|.|..+ . ....+.|+|.. +|.+.. .|....+.+|+.++|.|.+.|. |. +.|+|+||
T Consensus 81 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~ 160 (238)
T 1bec_A 81 PSQTSVYFCASGGGRGSYAEQFFGPGTRLTVLEDLRQVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVN 160 (238)
T ss_dssp GGGCEEEEEEEESCTTCGGGCEECCCEEEEEESCGGGCBCCEEEEECCCSTTCSSSCSCSEEEEEEEEBSCCEEEEEEET
T ss_pred cccCEEEEEEEecCCCCccccccCCCEEEEEeccCCCCCCCceEEECCChHHcccCCceEEEEEEeeEeCCCcEEEEEEC
Confidence 9999999999998742 1 11234577764 566543 3455566789999999999985 64 49999999
Q ss_pred ceeeecCCceE---EEEeCCe----EEEEEcccCccC-ceeEEEEEEcCC
Q psy7042 221 GRVVQSDDRFK---FTVLDDY----IIIFIKEIRKED-AGDYTVNLSNSS 262 (2245)
Q Consensus 221 g~~l~~~~~~~---~~~~~~~----~~L~i~~~~~~d-~G~Y~C~a~n~~ 262 (2245)
|..+..+.... ....+.. ..|.|.....+| .|.|+|.|.|..
T Consensus 161 g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~~ytC~v~~~~ 210 (238)
T 1bec_A 161 GKEVHSGVSTDPQAYKESNYSYCLSSRLRVSATFWHNPRNHFRCQVQFHG 210 (238)
T ss_dssp TEEECTTEEECSSCEEEETTEEEEEEEECCCHHHHTCTTCEEEEEEEECC
T ss_pred CEECCCceecccceEeCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEcCC
Confidence 99986543211 1112221 234454444434 678999999975
No 410
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.50 E-value=1.8e-13 Score=135.58 Aligned_cols=104 Identities=22% Similarity=0.373 Sum_probs=95.2
Q ss_pred CCCeeecCCCceEEcCCCeEEEEEEEecCCCceEEEeeCceeeecCCceEEEEeCCeEEEEEcccCccCceeEEEEEEcC
Q psy7042 182 TPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNS 261 (2245)
Q Consensus 182 ~~P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 261 (2245)
.+|.|...+..+.+.+|+.+.|.|.+.|.|.+.|+|+|+|..+....++.+........|.|.++..+|+|.|+|.|.|.
T Consensus 6 ~pp~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 85 (114)
T 2cqv_A 6 SGPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLVENK 85 (114)
T ss_dssp CCCEESCCCCSEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCCSSSEEEEECSSEEEEEETTCCTTTCEEEEEEEECS
T ss_pred CCCEEEeCCCCeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhcCEEEEEEEEEC
Confidence 57899999999999999999999999999999999999999998888888877777789999999999999999999999
Q ss_pred CcceEEEEEEEEecCCCCCCCCcc
Q psy7042 262 SGSVSGTFTINITGLPGPPIGPLD 285 (2245)
Q Consensus 262 ~g~~~~~~~l~V~~~p~~~~~~~~ 285 (2245)
.|..+..+.|.|.+.|.+|..+..
T Consensus 86 ~g~~~~~~~l~V~~~p~~P~~p~~ 109 (114)
T 2cqv_A 86 LGSRQAQVNLTVVDKPDPPAGTPS 109 (114)
T ss_dssp SCEEECCEEEEEECSCSCCCCCTT
T ss_pred CCcEEEEEEEEEECCCCCCCCCcc
Confidence 999999999999999888766543
No 411
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.50 E-value=1.4e-13 Score=162.34 Aligned_cols=180 Identities=15% Similarity=0.235 Sum_probs=127.7
Q ss_pred CCceEEcCCCeEEEEEEecCc--CCCeEEEeeCC--Eecc-----------------CCceEEEE--ecCcEEEEEEeee
Q psy7042 1704 LKDLVVPLGKLLTLQCEATGT--PVPKCRWLRNG--REIS-----------------SGARYRVE--TAGGVFRLHFNEV 1760 (2245)
Q Consensus 1704 ~~~~~~~~G~~v~L~C~~~~~--p~~~v~W~~~~--~~l~-----------------~~~~~~~~--~~~~~~~L~i~~v 1760 (2245)
+..+.+.+|++++|.|.+.+. +.+.+.|+|.. ..+. ...|+.+. ......+|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (280)
T 3fku_X 7 SGAEVKKPGSSVKVSCTSSEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYMDLRSL 86 (280)
T ss_dssp CCCCEECTTCCEEEEEEECCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEEEECSC
T ss_pred CCCEEECCCCcEEEEEEeeccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEEEECCC
Confidence 566889999999999999775 56789998742 1110 11355555 3456778999999
Q ss_pred ccCCCeEEEEEEecC---------ceeeEEEEEEEecC---------------CCccccCCCceEEcCCCeEEEEEEEec
Q psy7042 1761 TDVDNGDYTCEAYNS---------VGFAHTSSRVKIGT---------------PPRIDRMPNALYIPEGDNTKVKIFYAG 1816 (2245)
Q Consensus 1761 ~~~d~G~Y~C~~~n~---------~g~~~~~~~l~V~~---------------~p~~~~~~~~~~~~~g~~~~l~C~~~~ 1816 (2245)
+.+|+|.|.|.+.+. .........|.|.. ++.+...+. ..+.+|++++|.|.+.+
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~~p~-~~v~~G~~v~L~C~~~~ 165 (280)
T 3fku_X 87 RSEDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQPPS-VSKGLRQTATLTCTGNS 165 (280)
T ss_dssp CSTTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBCCSE-EEECTTCCEEEEEECCC
T ss_pred ChhhCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEeCCc-EEEecCCCEEEEEEecC
Confidence 999999999999886 12222345677766 556666665 88999999999999998
Q ss_pred -cC-CcEEEEEEC--CEEee------------cCCceEEEEcCCeEEEEEcccCcccceEEEEEEEcCCee---eEEEEE
Q psy7042 1817 -DQ-PMEVSLTKN--GRVVQ------------SDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGS---VSGTFT 1877 (2245)
Q Consensus 1817 -~p-~~~v~W~~~--g~~l~------------~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~---~~~~~~ 1877 (2245)
.+ .+.+.|+|. +..+. ...++.+........|.|.++..+|+|.|.|.+.|..+. -.....
T Consensus 166 ~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~g~~t~ 245 (280)
T 3fku_X 166 NNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQPEDEADYYCSTWDSSLSAVVFGGGTK 245 (280)
T ss_dssp CCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEEEETTTTEEEEBCCCE
T ss_pred CCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCCHHHCEEEEEEEecCCCCceEECCCEE
Confidence 44 479999973 33221 134566665666778999999999999999999997622 122345
Q ss_pred EEEeCCC
Q psy7042 1878 INITGLP 1884 (2245)
Q Consensus 1878 l~v~~~p 1884 (2245)
|.|...|
T Consensus 246 l~V~~~~ 252 (280)
T 3fku_X 246 LTVLGQP 252 (280)
T ss_dssp EEEC---
T ss_pred EEECCCC
Confidence 6665443
No 412
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.50 E-value=2e-13 Score=131.44 Aligned_cols=94 Identities=28% Similarity=0.490 Sum_probs=85.3
Q ss_pred CCceEEeeccceeeecCccEEEEEEEEeeCCCeEEEeeCCEeeCCCCcEEEE-EeCcEEEEEEcCCCCCCCeEEEEEEEe
Q psy7042 2086 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIF-AEGDTYTLIINSVYGVDADEYVCRAVN 2164 (2245)
Q Consensus 2086 ~~p~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~-~~~~~~~L~i~~v~~~d~G~Y~C~a~N 2164 (2245)
.+|.|...+.+..+.+|+.++|.|.+.|.|.|.|.|+|+|..+....++.+. ..+....|.|.++..+|+|.|+|.|.|
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N 83 (99)
T 1g1c_A 4 EAPKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAIN 83 (99)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCCceEecCcceEEcCCCcEEEEEEEEEeCCCEEEEEECCEECCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEEEEE
Confidence 4689988899999999999999999999999999999999999988776654 356677899999999999999999999
Q ss_pred CCceeeEEEEEEEEc
Q psy7042 2165 KGGVKSTKAELIIMT 2179 (2245)
Q Consensus 2165 ~~G~~~~~~~l~V~~ 2179 (2245)
.+|.....+.|.|..
T Consensus 84 ~~g~~~~~~~l~V~~ 98 (99)
T 1g1c_A 84 IAGETSSHAFLLVQA 98 (99)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCCcEEEEEEEEEec
Confidence 999999999999864
No 413
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.50 E-value=7.4e-14 Score=133.10 Aligned_cols=94 Identities=24% Similarity=0.441 Sum_probs=87.2
Q ss_pred CCCCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECCeeccCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEEc
Q psy7042 88 GEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYN 167 (2245)
Q Consensus 88 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 167 (2245)
..+|.|..++.++.+.+|+.++|.|.+ .|.|.|.|+|||..|..+.++.+..++...+|.|.+++.+|+|.|+|.|.|
T Consensus 5 ~~p~~~~~~~~~~~v~~G~~v~l~C~v--~p~p~v~W~k~g~~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 82 (100)
T 2yuz_A 5 SSGLKILTPLTDQTVNLGKEICLKCEI--SENIPGKWTKNGLPVQESDRLKVVQKGRIHKLVIANALTEDEGDYVFAPDA 82 (100)
T ss_dssp SCCCCCSBCCCCEEEETTSCCCEEEEC--SSCCCEEEEETTEECCCCSSEEEEECSSEEEEEESSCCGGGCSEEEEEESS
T ss_pred CCCCEEeccCCceEEcCCCCEEEEEEe--CCCCeEEEEECCEECCCCCcEEEEEeCCEEEEEECCCChhhCEEEEEEEcC
Confidence 458899999999999999999999999 788999999999999999999999988888999999999999999999999
Q ss_pred CcccceeEEEEEecCCCe
Q psy7042 168 SVGFAHTSSRVKIGTPPR 185 (2245)
Q Consensus 168 ~~g~~~~~~~l~V~~~P~ 185 (2245)
. ..+.++.|.|..+|.
T Consensus 83 ~--~~~~~a~L~V~~~P~ 98 (100)
T 2yuz_A 83 Y--NVTLPAKVHVISGPS 98 (100)
T ss_dssp S--CCCEEEEEEEECCSC
T ss_pred C--CeeEEEEEEEeCCCC
Confidence 7 567789999999875
No 414
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.49 E-value=1.5e-13 Score=156.76 Aligned_cols=170 Identities=9% Similarity=0.106 Sum_probs=117.4
Q ss_pred eecCCcceEEeCCCeEEEEEEEeee--cCCceEEEECC--ee---cc-------------CCCeEEEEEcC--cEEEEEE
Q psy7042 93 FIVPLKDLVVPLGKLLTLQCEATGT--PVPKCRWLRNG--RE---IS-------------SGARYRVETAG--GVFRLHF 150 (2245)
Q Consensus 93 ~~~~~~~~~v~~G~~v~L~C~~~g~--p~~~i~W~~~g--~~---l~-------------~~~~~~~~~~~--~~~~L~i 150 (2245)
++..|..+.+.+|++++|.|.+.+. +.+.+.|+|.. .. +. ..+|+.+..+. +..+|.|
T Consensus 4 v~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 83 (230)
T 1ypz_F 4 LEQPEISISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTI 83 (230)
T ss_dssp EECSCSEEEEETTSCEEEEEEECCGGGGGCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEEEEEE
T ss_pred ccccCCEEEEeCCCcEEEEEEeeccccCccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCCCCEEEEEE
Confidence 4556778899999999999999874 56789999842 21 10 24577776532 5678999
Q ss_pred eeeccCCCeEEEEEEEcC--cc--cceeEEEEEec---------CCCeeec-CCCceEEcCCCeEEEEEEEecC-CC-ce
Q psy7042 151 NEVTDVDNGDYTCEAYNS--VG--FAHTSSRVKIG---------TPPRIDR-MPNALYIPEGDNTKVKIFYAGD-QP-ME 214 (2245)
Q Consensus 151 ~~~~~~d~G~Y~C~a~n~--~g--~~~~~~~l~V~---------~~P~~~~-~~~~~~v~~G~~~~l~C~~~g~-p~-~~ 214 (2245)
.+++.+|+|.|.|.+.+. .. .....+.|.|. .+|.... .|....+.+|+.++|.|.+.|. |. +.
T Consensus 84 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~l~~~~~p~~~v~~p~~~~v~~g~~~~L~C~~~g~~P~~~~ 163 (230)
T 1ypz_F 84 YSLEEEDEAIYYCSYGEGSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEAFFPDVIR 163 (230)
T ss_dssp CSCCGGGCSEEEEEECCTTTCCCCEECSCEEEEEECCCTTCCSCCSCCCCEECCCHHHHHHHSCEEEEEEEEEESSCCCE
T ss_pred CcCChhhCEEEEEEEECCCCCcccccCCCEEEEEecccccCcccCCCCceEECCCchhhccCCcceEEEEEeeecCCCeE
Confidence 999999999999999985 11 11123567775 2343222 2444456679999999999875 74 69
Q ss_pred EEEee-CceeeecCCceEEEEeCC----eEEEEEcccCccCceeEEEEEEcCCcc
Q psy7042 215 VSLTK-NGRVVQSDDRFKFTVLDD----YIIIFIKEIRKEDAGDYTVNLSNSSGS 264 (2245)
Q Consensus 215 i~W~~-~g~~l~~~~~~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~ 264 (2245)
|+|++ ||..+.......+...+. .+.|.|..... | |.|+|.|.|..+.
T Consensus 164 v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-~~ytC~v~~~~~~ 216 (230)
T 1ypz_F 164 VYWKEKDGNTILDSQEGDTLKTNDTYMKFSWLTVPERAM-G-KEHRCIVKHENNK 216 (230)
T ss_dssp EEEECTTSSCBCCCEECCCEEETTEEEEEEEEEECGGGT-T-SCEEEEEECSSCT
T ss_pred EEEEccCCeEccccccceeecCCCCEEEEEEEEEEhhhC-C-CEEEEEEEECCCC
Confidence 99999 888775321111111111 24688888775 4 9999999998764
No 415
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.49 E-value=1.2e-13 Score=157.08 Aligned_cols=168 Identities=14% Similarity=0.209 Sum_probs=120.7
Q ss_pred CCceEEcCCCeEEEEEEecCcC--CCeEEEeeCC--Ee---cc----------------CCceEEEEe--cCcEEEEEEe
Q psy7042 1704 LKDLVVPLGKLLTLQCEATGTP--VPKCRWLRNG--RE---IS----------------SGARYRVET--AGGVFRLHFN 1758 (2245)
Q Consensus 1704 ~~~~~~~~G~~v~L~C~~~~~p--~~~v~W~~~~--~~---l~----------------~~~~~~~~~--~~~~~~L~i~ 1758 (2245)
+..+.+.+|++++|.|.+.+.+ .+.+.|+|++ .. +. ...|+.+.. ..+..+|.|.
T Consensus 7 p~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 86 (220)
T 1pz5_B 7 SGGGLVQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQMN 86 (220)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEEC
T ss_pred cCCEEEcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEEc
Confidence 3457899999999999998765 6789999853 11 10 024666554 3456789999
Q ss_pred eeccCCCeEEEEEEecCceee-E--EEEEEEecC----CCccccCCCceEEcCCCeEEEEEEEecc-CCc-EEEEEECCE
Q psy7042 1759 EVTDVDNGDYTCEAYNSVGFA-H--TSSRVKIGT----PPRIDRMPNALYIPEGDNTKVKIFYAGD-QPM-EVSLTKNGR 1829 (2245)
Q Consensus 1759 ~v~~~d~G~Y~C~~~n~~g~~-~--~~~~l~V~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~v~W~~~g~ 1829 (2245)
+++.+|+|.|.|.+.+..+.. . ....|.|.. +|.+...+....+.+|+.++|.|.+.|. |.+ .|+|++++.
T Consensus 87 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~ 166 (220)
T 1pz5_B 87 NLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYPLVPGCSDTSGSSVTLGCLVKGYFPEPVTVKWNYGAL 166 (220)
T ss_dssp SCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCSCCSCSSSEEEEEEEEEEBSSCCEEEEGGGTC
T ss_pred cCCHHHCEEEEEEEecCCcccceECCCEEEEEccCCCCCCeEEEcccccccCCCCcEEEEEEEEEEeCCCeEEEEecCCc
Confidence 999999999999999875422 1 345677753 4555443333446789999999999997 888 999999886
Q ss_pred Ee---ecC-----CceEEEEcCCeEEEEEcccCcccceEEEEEEEcCCeeeEEEEE
Q psy7042 1830 VV---QSD-----DRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFT 1877 (2245)
Q Consensus 1830 ~l---~~~-----~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 1877 (2245)
.+ ... ..+. ....|.|..+..+| |.|+|.|.|..|..+..+.
T Consensus 167 ~~~~~~~~~~~~~~~~~-----~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~ 216 (220)
T 1pz5_B 167 SSGVRTVSSVLQSGFYS-----LSSLVTVPSSTWPS-QTVICNVAHPASKVDLIKE 216 (220)
T ss_dssp CTTEEECCCEEETTEEE-----EEEEEEECGGGTTT-SCCEEEEEEGGGTEEEEEE
T ss_pred ccceEEcCCcccCCeEE-----EEEEEEEcchhcCC-ceEEEEEEECCccEeeeec
Confidence 31 110 1111 13568999888866 9999999999997766554
No 416
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.49 E-value=3.6e-14 Score=159.04 Aligned_cols=168 Identities=12% Similarity=0.137 Sum_probs=112.9
Q ss_pred cCCceE-EcCCCeEEEEEEecCcC----CCeEEEeeCCEeccCCce-EEEEecC----cEEEEEEeeeccCCCeEEEEEE
Q psy7042 1703 PLKDLV-VPLGKLLTLQCEATGTP----VPKCRWLRNGREISSGAR-YRVETAG----GVFRLHFNEVTDVDNGDYTCEA 1772 (2245)
Q Consensus 1703 ~~~~~~-~~~G~~v~L~C~~~~~p----~~~v~W~~~~~~l~~~~~-~~~~~~~----~~~~L~i~~v~~~d~G~Y~C~~ 1772 (2245)
++.... +.+|++++|.|.+.|.+ .+.|.|+|++..+..... ......+ ....|.|.+++.+|+|.|+|.+
T Consensus 8 ~P~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 87 (207)
T 2vol_A 8 PPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRV 87 (207)
T ss_dssp CCCHHHHHSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTCCEEEEE
T ss_pred CcChhhhhccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCCEEEEEE
Confidence 344444 78999999999998774 248999999977643210 0001111 1346999999999999999999
Q ss_pred ecCceee--EEEEEE--EecCCCccccCCCceEEcCCCeEEEEEEEecc-CC-cEEEEEECCEEeecCCceEEEEcCCe-
Q psy7042 1773 YNSVGFA--HTSSRV--KIGTPPRIDRMPNALYIPEGDNTKVKIFYAGD-QP-MEVSLTKNGRVVQSDDRFKFTVLDDY- 1845 (2245)
Q Consensus 1773 ~n~~g~~--~~~~~l--~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~v~W~~~g~~l~~~~~~~~~~~~~~- 1845 (2245)
.|..+.. ...+.+ .+..+|.+...+.......|+.+.|.|.+.|. |+ +.++|+|||+.+............++
T Consensus 88 ~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~ 167 (207)
T 2vol_A 88 NSAAFPAPIEKTISKTKGRPKAPQVYTLPPPKEQMAKDKVSLTCMITDFFPEDITVEWESNGQPAENYKNTQPIMDTDGS 167 (207)
T ss_dssp ECTTCSSCEEEEECCCCCCCBCCEEEEECCCTGGGSSSEEEEEEEEEEEBSSCCEEEEEETTEECSCEEECCCEECTTSC
T ss_pred EccCCCCceEEEeccCCCCCcCCeEEEeCCCHHHhcCCceEEEEEEeeEECCCCEEEEEECCEeccCcccCCceECCCCC
Confidence 9987753 233333 45667876544333223469999999999985 54 49999999998743211111112211
Q ss_pred ----EEEEEcccCcccceEEEEEEEcCCe
Q psy7042 1846 ----IIIFIKEIRKEDAGDYTVNLSNSSG 1870 (2245)
Q Consensus 1846 ----~~l~i~~~~~~d~G~Y~C~a~n~~g 1870 (2245)
..|.|.....+|.|.|+|.|.|...
T Consensus 168 ~~~~s~l~i~~~~~~~~g~ytC~a~n~~l 196 (207)
T 2vol_A 168 YFVYSKLNVQKSNWEAGNTFTCSVLHEGL 196 (207)
T ss_dssp EEEEEEEEEEHHHHSSCCEEEEEEECTTS
T ss_pred EEEEEEEEECHHHcCCCCEEEEEEECCCC
Confidence 2456666666789999999999864
No 417
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.49 E-value=5.7e-14 Score=161.41 Aligned_cols=177 Identities=14% Similarity=0.133 Sum_probs=122.3
Q ss_pred CceEEcCCCeEEEEEEecCcCCC---eEEEeeCCEeccC----------------CceEEEE-------ecCcEEEEEEe
Q psy7042 1705 KDLVVPLGKLLTLQCEATGTPVP---KCRWLRNGREISS----------------GARYRVE-------TAGGVFRLHFN 1758 (2245)
Q Consensus 1705 ~~~~~~~G~~v~L~C~~~~~p~~---~v~W~~~~~~l~~----------------~~~~~~~-------~~~~~~~L~i~ 1758 (2245)
.++.+..|++++|.|.+.+.+.+ .|.|+|++..+.. ..+.... ......+|.|.
T Consensus 9 ~~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~ 88 (225)
T 4fmk_A 9 PEVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAFR 88 (225)
T ss_dssp SEEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEEC
T ss_pred CEEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEEc
Confidence 34778999999999999887765 3899998654310 1111111 12234569999
Q ss_pred eeccCCCeEEEEEEecCceeeE-EEEEEEecCCCccccCCCceEEcCCCeEEEEEEEe-ccCCcEEEEEECCEEeecCCc
Q psy7042 1759 EVTDVDNGDYTCEAYNSVGFAH-TSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYA-GDQPMEVSLTKNGRVVQSDDR 1836 (2245)
Q Consensus 1759 ~v~~~d~G~Y~C~~~n~~g~~~-~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~-~~p~~~v~W~~~g~~l~~~~~ 1836 (2245)
+++.+|+|.|+|.+.|..+... ....+.+..+|.....+.......++.+.+.|.+. +.|++.+.|.+++..+.....
T Consensus 89 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~P~~~~~w~~~~~~~~~~~~ 168 (225)
T 4fmk_A 89 GLRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQPENHAEAQEVTIGPQSVAVARCVSTGGRPPARITWISSLGGEAKDTQ 168 (225)
T ss_dssp SCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECCBCCSSSCEEEEEEEEEEEBSCCEEEEECSSCCEEEEEE
T ss_pred cCCHHHCcceEEEEEeCCCcceeeeeeeeeecCCceeecccceeecceeeeeeeeeecCCCCCCEEEEEECCccccCCcc
Confidence 9999999999999988766444 34566677777666555556666778888777655 568899999998765533221
Q ss_pred eEEEEcCC---eEEEEEcccCcccceEEEEEEEcCCeeeEEE--EEEEEe
Q psy7042 1837 FKFTVLDD---YIIIFIKEIRKEDAGDYTVNLSNSSGSVSGT--FTINIT 1881 (2245)
Q Consensus 1837 ~~~~~~~~---~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~--~~l~v~ 1881 (2245)
......+. ...|.|.++..+|+|.|+|.|.|..|..... ++|.|.
T Consensus 169 ~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~~~~~v~l~V~ 218 (225)
T 4fmk_A 169 EPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPILLPVTLSVR 218 (225)
T ss_dssp EECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCBT
T ss_pred eEEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeEEEEEEEEEEE
Confidence 11111111 2469999999999999999999998866544 444443
No 418
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.49 E-value=2.4e-13 Score=130.93 Aligned_cols=95 Identities=25% Similarity=0.446 Sum_probs=88.7
Q ss_pred CCCceEEeeccceeeecCccEEEEEEEEeeCCCeEEEeeCCEeeCCCCcEEEEEeCcEEEEEEcCCCCCCCeEEEEEEEe
Q psy7042 2085 AKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVN 2164 (2245)
Q Consensus 2085 ~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N 2164 (2245)
..+|.|...+.+..+.+|+.++|.|.+.|.|.|.|.|+|+|..+..+.++.+..++....|.|.++..+|+|.|+|.|.|
T Consensus 4 ~~~P~i~~~~~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 83 (99)
T 3puc_A 4 SSKPVIVTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQGGKYKLSEDKGGFFLEIHKTDTSDSGLYTCTVKN 83 (99)
T ss_dssp CEEEEEEECCCCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCCCEEEecCccEEEeCCCcEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEeCCEEEEEECCCCcccCEEEEEEEEe
Confidence 34688998899999999999999999999999999999999999998999999888888999999999999999999999
Q ss_pred CCceeeEEEEEEEEc
Q psy7042 2165 KGGVKSTKAELIIMT 2179 (2245)
Q Consensus 2165 ~~G~~~~~~~l~V~~ 2179 (2245)
..|..+..+.|.|..
T Consensus 84 ~~g~~~~~~~l~V~~ 98 (99)
T 3puc_A 84 SAGSVSSSCKLTIKA 98 (99)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCCcEeEEEEEEEEe
Confidence 999999999998863
No 419
>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A
Probab=99.49 E-value=4.7e-13 Score=150.34 Aligned_cols=192 Identities=19% Similarity=0.200 Sum_probs=141.1
Q ss_pred CCCCCCCCCeeeeecCCcEEEEeeCCCCCCCcccccEEEEeeeCCCCCeEEEce-----eeeeeEEEecCCCCCEEEEEE
Q psy7042 668 DRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGN-----TRFTTMAITGLSPGHQYEFRV 742 (2245)
Q Consensus 668 ~~P~~p~~~~~~~~~~~si~lsW~~p~~~~~~~~~~y~v~~~~~~~~~w~~~~~-----~~~~~~~i~~L~p~t~y~~~v 742 (2245)
.+|++|.++.+.....+++.++|+++. +++. ...|.|.|+......|..+.. ...+.+.+.+|.+.+.|.|+|
T Consensus 2 ~pP~~P~nl~c~~~~~~~~~c~W~p~~-~~~~-~~~Y~l~y~~~~~~~~~~c~~~~~~~~~~c~~~~~~l~~~~~Y~~~V 79 (210)
T 3n06_B 2 LPPGKPEIFKCRSPNKETFTCWWRPGT-DGGL-PTNYSLTYHREGETLMHECPDYITGGPNSCHFGKQYTSMWRTYIMMV 79 (210)
T ss_dssp CCCCCCEEEEEEBSSSSCEEEEEECCS-SSCC-CSEEEEEEEETTCCCCEECSCSSTTCTTEEEECGGGCCSSSCEEEEE
T ss_pred CCCCCCeEeEEEeCCCCeEEEEECCCC-CCCC-CceEEEEEEECCCCccccCCCCCCCCCeEEEeCCCCcccceeEEEEE
Confidence 578999999999999999999999654 4443 479999999877667877642 223344456799999999999
Q ss_pred EEEecccCCCCCCCCccEEecCccccccccccccccCCCceeecccccccccCCceEEEEeeeccCccccccccceeccc
Q psy7042 743 YAENVYGRSDPSTTSDLITTKDTFKKQIKKRQYDFDETGKKIRGKADEKVSDYDQYVFDIYSKYVPQPVDIKTSSVYDHY 822 (2245)
Q Consensus 743 ~a~n~~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 822 (2245)
.|.|..|.+.... .. +.+.
T Consensus 80 ~A~N~~G~~~s~~-~~-~~~~----------------------------------------------------------- 98 (210)
T 3n06_B 80 NATNQMGSSFSDE-LY-VDVT----------------------------------------------------------- 98 (210)
T ss_dssp EEEETTEEEECCC-EE-ECGG-----------------------------------------------------------
T ss_pred EEEcCCCCeeCCc-EE-Echh-----------------------------------------------------------
Confidence 9999999753211 00 0000
Q ss_pred ccccccccCceeEEEEeeecccCCeeEEEeeccCCchhhhhhheeeeeeeccCCCceEeecccccCCcceEEEEEEecCC
Q psy7042 823 DILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFEVLDRP 902 (2245)
Q Consensus 823 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 902 (2245)
....|
T Consensus 99 ---------------------------------------------------------------------------~~v~p 103 (210)
T 3n06_B 99 ---------------------------------------------------------------------------YIVQP 103 (210)
T ss_dssp ---------------------------------------------------------------------------GCBCC
T ss_pred ---------------------------------------------------------------------------heEec
Confidence 00367
Q ss_pred CCCcccEEeeee----CceEEEEecCCCCCC---CCccceEEEeeeecCCCceEEecceeeeceEEEecCCCCceeeEEE
Q psy7042 903 HPPENLHADEFA----GDSLTLYWTPPRDNG---GSEITNYVVEKKDYNSTVWTKVSSYVTTPFVRVRNLAIGSTYEFRV 975 (2245)
Q Consensus 903 ~~p~~l~~~~~~----~~~~~l~W~~p~~~~---g~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v 975 (2245)
.||.++.+.... .+++.|+|++|.... |..+.+|+|+|+..+...|.... ......+.|.+|.|++.|.|+|
T Consensus 104 ~pP~~l~~~~~~~~~~~~~l~l~W~~p~~~~~~~g~~~~~Y~v~y~~~~~~~~~~~~-~~~~~~~~l~~L~p~t~Y~v~V 182 (210)
T 3n06_B 104 DPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEIHF-AGQQTEFKILSLHPGQKYLVQV 182 (210)
T ss_dssp CCCEEEEEEEECCSSSCCEEEEEEECCTTCCCTTSSCCEEEEEEEECTTCSSCEEEE-EETCSEEEECCCCTTCEEEEEE
T ss_pred CCCceEEEEEecCcCCCceEEEEcCCCCCccccCCeEEEEEEEEEecCCCCCCEEEe-ccCceEEEEeccCCCCEEEEEE
Confidence 899999887653 589999999986543 33478999999987777786543 3346789999999999999999
Q ss_pred EEEeccccCCCccccCcccccCCCC
Q psy7042 976 MAENQYGLSKPALTIDPIKAKHPFD 1000 (2245)
Q Consensus 976 ~a~n~~g~~~~s~~~~~~~~~t~~~ 1000 (2245)
+|.+..|. ++..+..+.++|+.+
T Consensus 183 ra~~~~g~--wS~wS~~~~~~Tp~~ 205 (210)
T 3n06_B 183 RCKPDHGY--WSAWSPATFIQIPSD 205 (210)
T ss_dssp EEEESSSC--CCCCCCCEEEECCTT
T ss_pred EEecCCCc--ccCCCCceeEECcCC
Confidence 99998664 444446777777654
No 420
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.49 E-value=1.6e-13 Score=148.65 Aligned_cols=154 Identities=14% Similarity=0.110 Sum_probs=110.1
Q ss_pred CceEEcCCCeEEEEEEecC-cCCCeEEEeeC-CEecc------------CC--ceEEEEecCcEEEEEEeeeccCCCeEE
Q psy7042 1705 KDLVVPLGKLLTLQCEATG-TPVPKCRWLRN-GREIS------------SG--ARYRVETAGGVFRLHFNEVTDVDNGDY 1768 (2245)
Q Consensus 1705 ~~~~~~~G~~v~L~C~~~~-~p~~~v~W~~~-~~~l~------------~~--~~~~~~~~~~~~~L~i~~v~~~d~G~Y 1768 (2245)
..+.+.+|++++|.|.+.+ .+.+.|.|+|+ +..+. .. .|+.+.. ...+|+|.+++.+|+|.|
T Consensus 7 ~~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~--~~~sL~I~~v~~~D~G~Y 84 (180)
T 2dru_A 7 PNVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDK--TNGALRIYNVSKEDRGDY 84 (180)
T ss_dssp CEEEEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECT--TTCCEEECSCCGGGCEEE
T ss_pred ceEEEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeC--CCccEEEcCCCHHHCeEE
Confidence 4478899999999999854 34678999994 32221 11 3555522 233599999999999999
Q ss_pred EEEEecCceeeEEEEEEEecCCCccccCCCceEEcCCCeEEEEEEE-eccCCcEEEEEECCEEeecCCceEEEEcCCeEE
Q psy7042 1769 TCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFY-AGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYII 1847 (2245)
Q Consensus 1769 ~C~~~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~ 1847 (2245)
+|.+.+.. .....+.|.|..++.. ..+ ...+..+.|.|.+ .| |.+.+.|++++..+... ....
T Consensus 85 ~C~v~~~~-~~~~~~~L~V~~~~~~----P~i-~~~~~~v~L~C~~~~g-p~p~i~W~~~~~~l~~~---------~~~~ 148 (180)
T 2dru_A 85 YMRMLHET-EDQWKITMEVYEMVSK----PMI-YWECSNATLTCEVLEG-TDVELKLYQGKEHLRSL---------RQKT 148 (180)
T ss_dssp EEEEESSS-EEEEEEEEEEECCCCC----CEE-EEEGGGTEEEEECSSC-TTCEEEEEETTEEEEEE---------SSSE
T ss_pred EEEEEcCC-eEEEEEEEEEECCCCC----CEE-EecCCCEEEEEEeCCC-CCCEEEEEECCeECcCC---------CCCE
Confidence 99998776 5666788888765321 111 1245679999999 55 99999999999987511 1124
Q ss_pred EEEcccCcccceEEEEEEEcCCeeeEEEEEE
Q psy7042 1848 IFIKEIRKEDAGDYTVNLSNSSGSVSGTFTI 1878 (2245)
Q Consensus 1848 l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 1878 (2245)
|.+.. .+|+|.|+|.|.|..|..+....+
T Consensus 149 l~~~~--~~d~g~Y~C~a~N~~~~~~~~~~i 177 (180)
T 2dru_A 149 MSYQW--TNLRAPFKCKAVNRVSQESEMEVV 177 (180)
T ss_dssp EEEEC--SCCSSCEEEEEEETTEEEEEEECC
T ss_pred EEEEE--hhcCccEEEEEecCcCccccceeE
Confidence 55532 789999999999999987766543
No 421
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.48 E-value=4.4e-15 Score=171.18 Aligned_cols=174 Identities=14% Similarity=0.214 Sum_probs=102.3
Q ss_pred CCceeccCCceEEcCCCeEEEEEEecCcCCCeEEEeeCC--Eec------------cCCceEEEEecCcEEEEEEeeecc
Q psy7042 1697 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNG--REI------------SSGARYRVETAGGVFRLHFNEVTD 1762 (2245)
Q Consensus 1697 ~p~~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~~--~~l------------~~~~~~~~~~~~~~~~L~i~~v~~ 1762 (2245)
.+.+...+..+.+.+|++++|.|.+.+.|.+.+.|+|++ ..+ ....|+.+...++..+|.|.+++.
T Consensus 23 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 102 (233)
T 3bqu_C 23 ETTVTQSPASLSMSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENMLS 102 (233)
T ss_dssp CCCEEEECSBC-------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----C
T ss_pred ceeEEEcCCeEEEecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCCH
Confidence 344555567788999999999999988887889999853 211 012344433344566799999999
Q ss_pred CCCeEEEEEEecCceeeE-EEEEEEecC---CCccccCCCceEEcCCCeEEEEEEEecc-CCc-EEEEEECCEEeecCCc
Q psy7042 1763 VDNGDYTCEAYNSVGFAH-TSSRVKIGT---PPRIDRMPNALYIPEGDNTKVKIFYAGD-QPM-EVSLTKNGRVVQSDDR 1836 (2245)
Q Consensus 1763 ~d~G~Y~C~~~n~~g~~~-~~~~l~V~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~v~W~~~g~~l~~~~~ 1836 (2245)
+|+|.|.|.+.|..+... ....|.|.. +|.+...+....+.+|++++|.|.+.|. |++ .++|+|+|+.+.....
T Consensus 103 ~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~ 182 (233)
T 3bqu_C 103 EDVADYYCLQSDNLPYTFGGGTNLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVL 182 (233)
T ss_dssp CCCSEEEEEECSSSSCCBCCCCBC---CCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEEC-----CCEE
T ss_pred HHCEEEEEEEecCCceeecCCEEEEEeCCCCCCEEEEeCCCHHhhcCCceEEEEEEccccCCceEEEEEECCeeCCCCce
Confidence 999999999988765322 123455544 5665543333334469999999999985 443 7999999987754411
Q ss_pred eEEE--EcC-----CeEEEEEcccCcccceEEEEEEEcCCe
Q psy7042 1837 FKFT--VLD-----DYIIIFIKEIRKEDAGDYTVNLSNSSG 1870 (2245)
Q Consensus 1837 ~~~~--~~~-----~~~~l~i~~~~~~d~G~Y~C~a~n~~g 1870 (2245)
.... ... ....|.|..+..+|.|.|+|.|.|...
T Consensus 183 ~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~ 223 (233)
T 3bqu_C 183 NSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTS 223 (233)
T ss_dssp EEECCCCTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC--
T ss_pred EecCCccCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCC
Confidence 1100 011 124688999999999999999999754
No 422
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.48 E-value=3.9e-13 Score=152.73 Aligned_cols=172 Identities=15% Similarity=0.202 Sum_probs=118.6
Q ss_pred CceEEcCCCeEEEEEEecCcC--CCeEEEeeCC--Ee---cc--------------CCceEEEEec--CcEEEEEEeeec
Q psy7042 1705 KDLVVPLGKLLTLQCEATGTP--VPKCRWLRNG--RE---IS--------------SGARYRVETA--GGVFRLHFNEVT 1761 (2245)
Q Consensus 1705 ~~~~~~~G~~v~L~C~~~~~p--~~~v~W~~~~--~~---l~--------------~~~~~~~~~~--~~~~~L~i~~v~ 1761 (2245)
..+.+.+|++++|.|.+.+.+ .+.+.|+|.. .. +. ...|+.+..+ .+..+|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (223)
T 1dee_B 8 GGGVVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSLR 87 (223)
T ss_dssp CCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECSCC
T ss_pred CCEEEcCCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECCCC
Confidence 457899999999999998765 4689999843 11 10 1246666543 357889999999
Q ss_pred cCCCeEEEEEEecCce------eeEEEEEEEecC----CCccccCCCceEEcCCCeEEEEEEEecc-CCc-EEEEEE-CC
Q psy7042 1762 DVDNGDYTCEAYNSVG------FAHTSSRVKIGT----PPRIDRMPNALYIPEGDNTKVKIFYAGD-QPM-EVSLTK-NG 1828 (2245)
Q Consensus 1762 ~~d~G~Y~C~~~n~~g------~~~~~~~l~V~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~v~W~~-~g 1828 (2245)
.+|+|.|.|.+.+..| .......|.|.. +|.+...+....+.+|+.++|.|.+.|. |.+ .++|++ +|
T Consensus 88 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~g 167 (223)
T 1dee_B 88 AEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGSASAPTLFPLVSCENSNPSSTVAVGCLAQDFLPDSITFSWKYKNN 167 (223)
T ss_dssp GGGCEEEEEEEESSSSTTCCEEEECCCEEEEECSSCCBCCEEEEEECTTCCCSSSEEEEEEEEEEEBSSCCEEEEEETTS
T ss_pred HHHCEEEEEEEeccccCcccceeecCcEEEEEccCCCCCCEEEEecCCcccCCCCcEEEEEEEEEEeCCCeEEEeEccCC
Confidence 9999999999998653 111235777863 4554432222235689999999999987 766 999999 88
Q ss_pred EEeecCCceE-EEEcC---CeEEEEEcccCc--ccceEEEEEEEcCCeeeEEEE
Q psy7042 1829 RVVQSDDRFK-FTVLD---DYIIIFIKEIRK--EDAGDYTVNLSNSSGSVSGTF 1876 (2245)
Q Consensus 1829 ~~l~~~~~~~-~~~~~---~~~~l~i~~~~~--~d~G~Y~C~a~n~~g~~~~~~ 1876 (2245)
..+.....+. ....+ ....|.|..... +|.|.|+|.|.|..+......
T Consensus 168 ~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~~~~~~ 221 (223)
T 1dee_B 168 SDISSTRGFPSVLRGGKYAATSQVLLPSKDVAQGTNEHVVCKVQHPNGNKEKDV 221 (223)
T ss_dssp CBCSCEEECCCEEETTEEEEEEEEEEECTTTTSTTCCEEEEEEECTTCCEEEEE
T ss_pred CccceeEECCccccCCeEEEEEEEEEcHHHhccCCCCEEEEEEEeCCCCCcccc
Confidence 8764300000 00011 124578877766 789999999999998766544
No 423
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.48 E-value=2.5e-13 Score=155.72 Aligned_cols=171 Identities=13% Similarity=0.221 Sum_probs=114.3
Q ss_pred cceEEeCCCeEEEEEEEeeec--CCce--EEEECC--e---ec-----c-----------CCCeEEEEEc--CcEEEEEE
Q psy7042 98 KDLVVPLGKLLTLQCEATGTP--VPKC--RWLRNG--R---EI-----S-----------SGARYRVETA--GGVFRLHF 150 (2245)
Q Consensus 98 ~~~~v~~G~~v~L~C~~~g~p--~~~i--~W~~~g--~---~l-----~-----------~~~~~~~~~~--~~~~~L~i 150 (2245)
..+.+.+|++|+|.|.+.+.+ ...+ .|+|.. . .+ . ..+|+.+..+ .+.++|.|
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~i~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 87 (232)
T 3qhz_H 8 GPALVKPTQTLTLTCSFSGFSLSTSGMSVSWIRQPPGKALEWLALIDWDDDTYYITYSSSLKTRLTISKDTSKSQVVLTM 87 (232)
T ss_dssp CCSEECTTSCEEEEEEEESCGGGCTTCEEEEEEECTTSCCEEEEEEESSSSCEEECCCTTTTTTEEEEEETTTTEEEEEE
T ss_pred CCEEECCCCcEEEEEEEeCcccccceeEeEEEEECCCCCcEEEEEEECCCCccccccCccccCceEEEeccCCCEEEEEE
Confidence 346789999999999997643 2456 999832 1 11 0 1246776654 36778999
Q ss_pred eeeccCCCeEEEEEEEcCcc--------cceeEEEEEec----CCCeeecCCCceEEcCCCeEEEEEEEecC-C-CceEE
Q psy7042 151 NEVTDVDNGDYTCEAYNSVG--------FAHTSSRVKIG----TPPRIDRMPNALYIPEGDNTKVKIFYAGD-Q-PMEVS 216 (2245)
Q Consensus 151 ~~~~~~d~G~Y~C~a~n~~g--------~~~~~~~l~V~----~~P~~~~~~~~~~v~~G~~~~l~C~~~g~-p-~~~i~ 216 (2245)
.+++.+|+|.|.|.+.+..+ .......|.|. .+|.+...+....+.+|+.++|.|.+.|. | ...+.
T Consensus 88 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~~~~v~ 167 (232)
T 3qhz_H 88 TNMDPVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVS 167 (232)
T ss_dssp CSCCGGGCEEEEEEEECCC---CCCCCCEECCCEEEEECSSCCBCCEEEEECC-------CEEEEEEEEEEEBSSCCEEE
T ss_pred CcCChhhCEEEEEEEeeccCccccccceeeCCCeEEEEecCCCCCCEEEEecccccccCCCcEEEEEEEeeEeCCCeEEE
Confidence 99999999999999997631 12234457775 35666644444556679999999999874 4 34678
Q ss_pred EeeCceeeec---------CCceEEEEeCCeEEEEEcccCccCceeEEEEEEcCCcceEEEEEEEEe
Q psy7042 217 LTKNGRVVQS---------DDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINIT 274 (2245)
Q Consensus 217 W~~~g~~l~~---------~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 274 (2245)
|+++|..+.. +..+.+ .+.|.|.....+| |.|+|.|.|..+.....+.|.+.
T Consensus 168 W~~~g~~~~~~~~~~~~~~~g~~~~-----~s~L~i~~~~~~~-g~ytC~v~~~~~~~~~~~~l~~~ 228 (232)
T 3qhz_H 168 WNSGALTSGVHTFPAVLQSSGLYSL-----SSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPK 228 (232)
T ss_dssp EGGGTBCTTEEECCCEECTTSCEEE-----EEEEEEEGGGGGT-CCCEEEEEEGGGTEEEEEECCCC
T ss_pred EEECCEecceeeccceeCCCCCEEE-----EEEEEEchhhcCC-CEEEEEEEeCCCCccEEEEeCCC
Confidence 9999864321 112211 1368899998889 99999999998877777666543
No 424
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.48 E-value=9.5e-14 Score=161.63 Aligned_cols=169 Identities=13% Similarity=0.176 Sum_probs=116.2
Q ss_pred eecCCcceEEeCCCeEEEEEEEeeecCCceEEEEC--Ceecc---------------CCC-eEEEEEcCcEEEEEEeeec
Q psy7042 93 FIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRN--GREIS---------------SGA-RYRVETAGGVFRLHFNEVT 154 (2245)
Q Consensus 93 ~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~--g~~l~---------------~~~-~~~~~~~~~~~~L~i~~~~ 154 (2245)
++..|..+.+.+|++++|.|.+.+.+.+.|.|+|. +.... ..+ |+.+...+... |.|.+++
T Consensus 4 v~q~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~-L~I~~v~ 82 (253)
T 3to4_D 4 LEQNPRWRLVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTE-LRLQVAN 82 (253)
T ss_dssp CEEECSEEEEESSCCEEEEEECSCTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSC-CEEEEES
T ss_pred EEeCCCeEEEeCCCcEEEEEEeCCCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCe-EEEccCC
Confidence 34567778999999999999998888889999982 21110 011 66665544433 9999999
Q ss_pred cCCCeEEEEEEEcCcc------cceeEEEEEec------CCCeeecC-CCceEEcCCCeEEEEEEEec-CCCc-eEEEee
Q psy7042 155 DVDNGDYTCEAYNSVG------FAHTSSRVKIG------TPPRIDRM-PNALYIPEGDNTKVKIFYAG-DQPM-EVSLTK 219 (2245)
Q Consensus 155 ~~d~G~Y~C~a~n~~g------~~~~~~~l~V~------~~P~~~~~-~~~~~v~~G~~~~l~C~~~g-~p~~-~i~W~~ 219 (2245)
.+|+|.|.|.|.+..+ .....+.|.|. .+|.+... +....+.+|+.++|.|.+.| .|++ .++|+|
T Consensus 83 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k 162 (253)
T 3to4_D 83 MSQGRTLYCTSSADHWTNTGQLYFGEGSKLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWV 162 (253)
T ss_dssp CSSCEEEEEEEECSCCSTTCCEEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE
T ss_pred hhhCeEEEEEEecCCCCcccceEECCCEEEEEecCCCCCCCCeEEEeCCChhhcccCCceEEEEEEceEECCcEEEEEEE
Confidence 9999999999997654 11123456665 34554432 33334456799999999988 6766 899999
Q ss_pred CceeeecCCceEE---E-----EeCC---eEEEEEcccCccC-ceeEEEEEEcCC
Q psy7042 220 NGRVVQSDDRFKF---T-----VLDD---YIIIFIKEIRKED-AGDYTVNLSNSS 262 (2245)
Q Consensus 220 ~g~~l~~~~~~~~---~-----~~~~---~~~L~i~~~~~~d-~G~Y~C~a~n~~ 262 (2245)
||..+........ . ..+. .+.|.|.....+| .|.|+|.|.|..
T Consensus 163 ~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~~~ytC~v~h~~ 217 (253)
T 3to4_D 163 NGKEVHSGVSTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYG 217 (253)
T ss_dssp TTEEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECC
T ss_pred CCEECCCceecccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEeCC
Confidence 9999865321110 0 0111 1368888887777 779999999875
No 425
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.47 E-value=4.5e-14 Score=160.92 Aligned_cols=181 Identities=17% Similarity=0.186 Sum_probs=126.7
Q ss_pred ccccccccccceeeEEEEec-cCcC----eEEEEeCCeecCC-------------CccEEEEe-----eCCeEEEEEecc
Q psy7042 487 LRNANAIQNHNAQFQCTITG-CPKP----TISWLKGSREITP-------------SARHHIFA-----EGDTYTLIINSV 543 (2245)
Q Consensus 487 ~~~~~~~~g~~~~l~C~~~g-~p~~----~v~W~~~~~~i~~-------------~~~~~~~~-----~~~~~~L~i~~v 543 (2245)
+.++.+.+|+++.|.|.+.+ .+.+ .+.|+|++..... ..+..+.. ..+...|.|.++
T Consensus 6 p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v 85 (221)
T 3eow_R 6 PTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGL 85 (221)
T ss_dssp CCCCCCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCS
T ss_pred CCcEEEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccC
Confidence 34567889999999999954 4443 4999999653211 34444443 123458999999
Q ss_pred cccCCceEEEEEEeCC-CCCCcceeEeEecCCCCCCCCCcccceEeeCCCeE-EEEEeee-ecCCCeEEEEeCCeEeecc
Q psy7042 544 YGVDADEYVCRAVNKG-GVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENV-VVKIPFT-GYPKPKITWYRDNEVIESG 620 (2245)
Q Consensus 544 ~~~d~G~Y~C~a~n~~-g~~~~~~~l~v~~~p~~~~~p~~~~~~~~~~g~~~-~l~C~~~-g~p~~~i~W~~~~~~~~~~ 620 (2245)
+.+|+|.|+|.+.|.. |.....+.|.|..+|.+...+.. . ...|+.+ .|.|.+. +.|.|.|+|++++......
T Consensus 86 ~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~P~~~~~~~~---~-~~~g~~~~~l~C~~~~g~P~p~v~W~k~~~~~~~~ 161 (221)
T 3eow_R 86 RVEDEGSYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQK---V-QLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPQT 161 (221)
T ss_dssp SCCCCSCBEEEEEESSSCSCEEECCCCCCCCCEEEEEEEC---C-CCCSSSCCEEEEEEESCSSCCCEEEECSSSCCCCC
T ss_pred ChHHCeEEEEEEEeCCCCceEEEEEEEEEECCCceeecCC---c-ccCCceEEEEEEECCCccCCCeeEEEeCCCCCCcc
Confidence 9999999999999976 77777888888887766432211 1 1467888 5999987 8999999999975433221
Q ss_pred CeEEEEec---CCeEEEEEcCCCCCcCEEEEEEEEeCCCCceeEEEEEeeCCCCCC
Q psy7042 621 GHFHVETS---ERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPP 673 (2245)
Q Consensus 621 ~~~~~~~~---~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~P~~p 673 (2245)
........ ...+.|.|.++..+|.|.|+|.|.|..+.....+.|. ..|..|
T Consensus 162 ~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~~~~~~~v~--~~~~~~ 215 (221)
T 3eow_R 162 SQVPGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFEKPQLLTVS--LTVYYP 215 (221)
T ss_dssp EEECCCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCSSSCEEEEEC--CCCCC-
T ss_pred ceeecCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCCCCeEEEEE--EEEEcc
Confidence 11100011 1246799999999999999999999998776655554 444433
No 426
>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens}
Probab=99.47 E-value=8.7e-11 Score=144.36 Aligned_cols=401 Identities=14% Similarity=0.171 Sum_probs=239.4
Q ss_pred eCceEEEEecCCCCCCCCccceEEEeeeecCCCceEEecceeeeceEEEecCCCCceeeEEEEEEeccccCCCccccCcc
Q psy7042 914 AGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPI 993 (2245)
Q Consensus 914 ~~~~~~l~W~~p~~~~g~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~s~~~~~~ 993 (2245)
+-..+..+|+++...+ .-..|.+-+.. ....-. ...++.+.|..|.+++ +++.|-.....|..... ..+
T Consensus 8 ~~~~~~c~w~~~~~~~--~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~ 76 (483)
T 3e0g_A 8 NLQVWQCSWKAPSGTG--RGTDYEVCIEQ-RSRSCY----QLEKTSIKIPALSHGD-YEITINSLHDFGSSTSK---FTL 76 (483)
T ss_dssp STTEEEEBCCCCSSSC--SSCCEEEEECS-SSCEEE----EESSSBCCEECCSSSC-CCEEEECSSCC----CC---CEE
T ss_pred cceEEEEeccCCCCCC--CCceEEEEEeC-Ccccch----hhhccceEeecCCccc-eEEEEcccCCCCCCcee---EEE
Confidence 3445778999875432 33568887554 111111 1255678899999999 66666665444433222 222
Q ss_pred cccCCCCCCCCCCCCeeEeecC-CeEEEEecCCCCCC-CCccceEEEEEEecCCcc--ceecccccc-CCcceeEEEEee
Q psy7042 994 KAKHPFDVPGAPGAPKGVDSTE-DSISLVWSKPRHDG-GSPIQRYIVEKRLISDDK--WIKASMAHI-PDTSLKYVLWVS 1068 (2245)
Q Consensus 994 ~~~t~~~~p~~p~~~~~~~~~~-~~v~l~W~~p~~~~-~~~i~~y~v~~~~~~~~~--~~~~~~~~~-~~~~~~~~~w~~ 1068 (2245)
..+.-..+|.+|..+.+....+ .++.|+|....... ...-..|.|+.......+ |...-...+ .....-.-.|-
T Consensus 77 ~~~~~~~~p~~p~~l~~~~~~~~~~l~~~w~~~~~~~~~~~~~~~~i~i~r~~~~~~v~~~~~~~~~~~~~~~~~w~w~- 155 (483)
T 3e0g_A 77 NEQNVSLIPDTPEILQLSADFSTSTLYLKWNDRGSVFPHRSNVIWEIKVLRKESMELVKLVTHQTTLNGKDTLHHWSWA- 155 (483)
T ss_dssp CCSCCEECCCCCCBCCCEEETTTTEEEEEEEECGGGCCSCCEEEEEEEEESSSSCEEEEEEEEEECGGGCCEEEEEEEE-
T ss_pred EcccceeccCCCceEEEEecCCCcEEEEEEeCCCCCCCcccceEEEEEEEEcCCccEEEEEEEEEEecCCCceEEEEec-
Confidence 2222236788899998887665 99999998643210 011356888776544322 111100000 11111111221
Q ss_pred cccccCCccCchhhhhhhhhcccccccccccCCcEEEEEEEEE-ec---CCCCCCCCCCcceeecCCCCCCccccCCCce
Q psy7042 1069 EGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAV-NA---AGQGPWSSSSDIIMCCAPPCAPKITSDLSIR 1144 (2245)
Q Consensus 1069 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~v~A~-n~---~G~~~~s~~~~~~~~~~~p~~p~~~~~~~~~ 1144 (2245)
=+--.+.+.|.++||+. |+ .|.+.+|..+...+......... ...++
T Consensus 156 --------------------------s~~plec~~h~v~iR~~~~~~~~~~~~~ws~Ws~~~~~~~~~~~~~---~ifP~ 206 (483)
T 3e0g_A 156 --------------------------SDMPLECAIHFVEIRCYIDNLHFSGLEEWSDWSPVKQISWIPDSQT---KVFPQ 206 (483)
T ss_dssp --------------------------CSSCTTSSCEEEEEEEEEECTTCCSEECCCCCCCCEEECCCCCSSC---CEESC
T ss_pred --------------------------CCCCCCCCccEEEEEEEecccccCCCCCCcCCCChhhccccCCCCc---EEecc
Confidence 11124678899999998 44 56667888887766644322111 24567
Q ss_pred eEEEEcCCeEEEEEEeeecCCCcceEEeCCeecCCCCcEEEEEccceEEEEecCcccccc-ceeEEEEEEcCCcceeEEE
Q psy7042 1145 DMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATD-SGSYTIQLVNTVGSDSASC 1223 (2245)
Q Consensus 1145 ~~~v~~~~~~~l~~~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~a~n~~g~~~~s~ 1223 (2245)
+..+..|+.+++.|.... .......++.. ............+++..+..... +..|.|... ......
T Consensus 207 ~~vv~~GS~vt~~Ci~~~---~~~~~~l~~~~-----~~~~~l~~~~~~i~v~nl~~~~~sg~n~~C~~~----~~~~g~ 274 (483)
T 3e0g_A 207 DKVILVGSDITFCCVSQE---KVLSALIGHTN-----CPLIHLDGENVAIKIRNISVSASSGTNVVFTTE----DNIFGT 274 (483)
T ss_dssp SEEEETTCCEEEEECCSS---CEEEEESSSCC-----BCCEECSSSCEEEEECSCCCCCSSCEEEEEEES----SCEEEE
T ss_pred CCEEeCCCCEEEEEEeCc---cccceecCccc-----ceeEEecCCEEEEEEeCCCCccCccceEEEecC----Ccccce
Confidence 888999999999998742 11222222211 11122234455566665543223 346888742 234455
Q ss_pred EEEEECCCCCCCCCceeeeccCCcEEEEecCCCCCC--CcceeeeEEEEeeccccceEEccc----ceecceEEecCCCC
Q psy7042 1224 KVYVVDKPSPPQGPLDVSDITPESCSLSWKPPLDDG--GSPITNYVVEKYESATGFWSKLSS----FVRSPAYDVFGLET 1297 (2245)
Q Consensus 1224 ~~~v~~~p~~p~~~~~~~~~~~~s~~l~W~~p~~~~--g~~i~~Y~v~~~~~~~~~~~~~~~----~~~~~~~~l~~L~~ 1297 (2245)
.+.+..+|.+| .++.+......++.++|+++.+.+ |.+.+.|.+.|+.. +....... ........+.+|.+
T Consensus 275 ~l~vg~PP~~P-~nlsC~s~~~~sltCsW~pg~dt~l~G~~~t~YtL~y~~~--g~~~~C~~~~~~~~~~~~C~~~~l~~ 351 (483)
T 3e0g_A 275 VIFAGYPPDTP-QQLNCETHDLKEIICSWNPGRVTALVGPRATSYTLVESFS--GKYVRLKRAEAPTNESYQLLFQMLPN 351 (483)
T ss_dssp EEEEECCCCCC-EEEEEEBSSTTEEEEEEECCSCCSCCGGGCCEEEEEETTT--CCEEEECCCSSCSCSCEEEEEECCTT
T ss_pred EEECcCCCCCC-CccEEEecCCCEEEEEECCCCcCCcCCCCCeeEEEEEEEC--CCCccccCCcccCCCEEEEEEccCCC
Confidence 67776677665 457776666778999999987643 44578999988753 22222211 12344688999999
Q ss_pred CceEEEEEEEeccccCCCCcccCCcccccCCCCCCCCCCCCeeeeccCCcEEEEeeCCCCCCCccceeeEEEEecCCC
Q psy7042 1298 NRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTG 1375 (2245)
Q Consensus 1298 ~t~Y~~~v~A~n~~G~~~~s~~~~~~~~~~~~~~p~~p~~~~~~~~~~~s~~l~W~~p~~~~g~~i~~y~i~~~~~~~ 1375 (2245)
.+.|.|+|.|.|..|.+.. .. .+.. .....|.+|.++.+..+..+++.|+|.+|...++ .+..|+|+|+..+.
T Consensus 352 ~t~Y~f~V~A~N~lG~~~S-~~--~~~~-~~~VkP~PP~nl~v~~~~stsl~LsW~~P~~~~~-~~L~YeVrYr~~~~ 424 (483)
T 3e0g_A 352 QEIYNFTLNAHNPLGRSQS-TI--LVNI-TEKVYPHTPTSFKVKDINSTAVKLSWHLPGNFAK-INFLCEIEIKKSNS 424 (483)
T ss_dssp CCCEEEEEEEECSSCEEEE-EE--EECG-GGGBCCCCCEEEEECCSSSSSCCEEEECCSCCTT-SBCCCEEEEECSSS
T ss_pred CcEEEEEEEEEeCCCCccc-ce--EEEe-ccccCCCCCeeeEEEEecCCeEEEEECCCCCCCC-ceEEEEEEEEECCC
Confidence 9999999999999998762 21 1111 1234678888888888888999999999864443 67899999997654
No 427
>3d85_D IL-12B, interleukin-12 subunit P40, cytotoxic lymphocyte; FAB, immune system/cytokine complex; 1.90A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 3d87_B* 3duh_A* 1f42_A* 1f45_A* 3hmx_A* 3qwr_A*
Probab=99.47 E-value=7.8e-13 Score=155.75 Aligned_cols=253 Identities=15% Similarity=0.121 Sum_probs=156.0
Q ss_pred CceeccccccccccccceeeEEEEeccCcCeEEEEeCCeecCCCccEEEEeeCCeEEEEEecccccCCceEEEEEEeCCC
Q psy7042 481 PEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGG 560 (2245)
Q Consensus 481 p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g 560 (2245)
+..++.+.-..+..|++++|.|.+.. +. .|.|.+++..... ..++ .|.|.++...|+|.|+|.| .|
T Consensus 7 ~~~v~~~~~~~~~~G~~v~l~C~~~~-~~-~i~W~~~~~~~~~-------~~~~--~L~i~~~~~~d~G~YtC~~---~~ 72 (306)
T 3d85_D 7 DVYVVELDWYPDAPGEMVVLTCDTPE-ED-GITWTLDQSSEVL-------GSGK--TLTIQVKEFGDAGQYTCHK---GG 72 (306)
T ss_dssp TEEEEEEECCSSCCCEEEEEECSSSC-CS-SCEEEETTCCCCC-------EESS--EEEEEECSGGGCEEEEEEE---TT
T ss_pred CcEEEeCCcccCccCCcEEEECCCCC-CC-cCEEEECCccccC-------CCCC--EEEEEecCcCCCceEEEee---CC
Confidence 33444444556779999999999874 33 7999999875432 1233 8999999999999999999 36
Q ss_pred CCCcceeEeEecCC------CCCCCCCcccceEeeCCCeEEEEEeeeecC-CCeEEEEeCCeEeeccCeEEEEecC----
Q psy7042 561 VKSTKAELIIMTAP------KFNVPPRFRDTAYFDKGENVVVKIPFTGYP-KPKITWYRDNEVIESGGHFHVETSE---- 629 (2245)
Q Consensus 561 ~~~~~~~l~v~~~p------~~~~~p~~~~~~~~~~g~~~~l~C~~~g~p-~~~i~W~~~~~~~~~~~~~~~~~~~---- 629 (2245)
.....+.|.|..++ .|...+.. . -+...|.|.+...+ ...++|..+...... ..+......
T Consensus 73 ~~~~~~~l~v~~~~~~~~~t~i~~~~~~------p-p~~~~lsC~~~~~~~~~~C~W~pg~~~~l~-~~~~~~r~~~~~~ 144 (306)
T 3d85_D 73 EVLSHSLLLLHKKEDGIWSTDILKDQKE------P-KNKTFLRCEAKNYSGRFTCWWLTTISTDLT-FSVKSSRGSSDPQ 144 (306)
T ss_dssp EEEEEEEEEEEEEETTEECCCSSCCCC----------CCCCCEEEBSSSSSEEEEEEEESCCSSEE-EEEEEEECSSSCE
T ss_pred cccceEEEEEEeccCCcceeeeecccCC------C-CCCCcceEEcCCcccCcEEEecCCCCCcee-EEEEEEecCCCCc
Confidence 66666777766421 22111110 0 11335777776655 556777775531100 001000000
Q ss_pred ---------CeEEEEE-------------cCCC----CCcCEEEEEEEEeCCCCceeEEEEEe--eCCCCCCCCCeeeee
Q psy7042 630 ---------RHAILTI-------------RDAS----NVDTAPYRVVAENDLGMDSAIVKIQI--SDRPDPPQFPTVEDI 681 (2245)
Q Consensus 630 ---------~~~~l~i-------------~~~~----~~d~g~y~C~a~n~~g~~~~~~~l~v--~~~P~~p~~~~~~~~ 681 (2245)
....+.| ...- ....+.++|.|.|..|..+....+.+ ...|+||.++.+..+
T Consensus 145 ~~~C~~~~~~~~~c~v~~~~~~~~~~c~~~~~cp~~~~~~~y~~~V~A~n~lg~~s~~~~f~~~~iVkPdPP~~l~~~~~ 224 (306)
T 3d85_D 145 GVTCGAATLSAERVRGDNKEYEYSVECQEDSACPAAEESLPIEVMVDAVHKLKYEQYTSSFFIRDIIKPDPPKNLQLKPL 224 (306)
T ss_dssp EEEECCCEEEEEEEC--CEEEEEEEEEEETTCCTTSCCCSCEEEEEEEEETTEEEEEEEEECHHHHBCCCCCEEEEEEEC
T ss_pred ceECCCCCCCccceeecCccccceeeeeeccccccccccEEEEEEEEEEccCCccccceEEEehhcEecCCCceEEEEEe
Confidence 0011111 1111 12468889999999997766655544 568999999998875
Q ss_pred c-CCcEEEEeeCCCCCC---CcccccEEEEeeeCCCCCeEEEceeeeeeEEEecCCCCCEEEEEEEEEecccCCCCCCCC
Q psy7042 682 G-HDSLALVWRAPIWDG---GSNITNYIVEKREHPMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTS 757 (2245)
Q Consensus 682 ~-~~si~lsW~~p~~~~---~~~~~~y~v~~~~~~~~~w~~~~~~~~~~~~i~~L~p~t~y~~~v~a~n~~G~~~~s~~~ 757 (2245)
. ...+.|+|++|..-. +-..+.|.|+|+......|........+++.+ .+++.|.|+|+|.+..|.|.+|+++
T Consensus 225 ~~~~~l~vsW~~P~~~~~p~~~~~L~Y~vryr~~~~~~~~~~~~~~~ts~~l---~~~~~Y~vqVRa~~~~~~G~WSeWS 301 (306)
T 3d85_D 225 KNSRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKSKREKKDRVFTDKTSATV---ICRKNASISVRAQDRYYSSSWSEWA 301 (306)
T ss_dssp ----CEEEEEECCTTSCSCTTTSCEEEEEEEECC------CEEEESSSEEEE---CCCSSCEEEEEEEESSSCCCCCCCE
T ss_pred cCCCcEEEEEcCCCCCcCCCceeeEEEEEEEEECCCCccEEEeeccccEEEE---eCCCeEEEEEEeccCCCCCCCCCCC
Confidence 4 489999999874321 11347999999987766665443333345555 4699999999999999999999876
Q ss_pred c
Q psy7042 758 D 758 (2245)
Q Consensus 758 ~ 758 (2245)
.
T Consensus 302 ~ 302 (306)
T 3d85_D 302 S 302 (306)
T ss_dssp E
T ss_pred C
Confidence 4
No 428
>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A
Probab=99.47 E-value=5.3e-13 Score=150.78 Aligned_cols=194 Identities=14% Similarity=0.088 Sum_probs=141.3
Q ss_pred CCCCCCCCCeeeee-cCCcEEEEeeCCCCCCCcccccEEEEeeeCCC------CCeEEEc---eeeeeeEEEecCCCCCE
Q psy7042 668 DRPDPPQFPTVEDI-GHDSLALVWRAPIWDGGSNITNYIVEKREHPM------SSWIRVG---NTRFTTMAITGLSPGHQ 737 (2245)
Q Consensus 668 ~~P~~p~~~~~~~~-~~~si~lsW~~p~~~~~~~~~~y~v~~~~~~~------~~w~~~~---~~~~~~~~i~~L~p~t~ 737 (2245)
.+|.+|.++.+... ..+++.++|+++. +++. ...|.|.|+.... ..|..+. +...+.+.+.+|.+++.
T Consensus 3 ~pP~~P~~l~c~~~~~~~~~~~~W~p~~-~~~~-~~~Y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~ 80 (215)
T 1cd9_B 3 YPPASPSNLSCLMHLTTNSLVCQWEPGP-ETHL-PTSFILKSFRSRADCQYQGDTIPDCVAKKRQNNCSIPRKNLLLYQY 80 (215)
T ss_dssp CCCCCCEEEEEEEETTTTEEEEEEECCS-CCSS-CCEEEEEEEECCGGGCSCCCEEEEEECCTTCCEEEEEGGGCCTTSC
T ss_pred CCCCCCeeeeeecCCCcccEEEEecCCC-CCCC-ceeEEEEEEecCCcccccccccccCCCCCCCcEEEECCcccccceE
Confidence 47889999988877 6899999999654 4443 4679999986432 1233332 23446677789999999
Q ss_pred EEEEEEEEecccCCCCCCCCccEEecCccccccccccccccCCCceeecccccccccCCceEEEEeeeccCccccccccc
Q psy7042 738 YEFRVYAENVYGRSDPSTTSDLITTKDTFKKQIKKRQYDFDETGKKIRGKADEKVSDYDQYVFDIYSKYVPQPVDIKTSS 817 (2245)
Q Consensus 738 y~~~v~a~n~~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 817 (2245)
|.|+|.|.|..|.+. +....+ .+.
T Consensus 81 Y~~~V~A~N~~G~~~-s~~~~~-~~~------------------------------------------------------ 104 (215)
T 1cd9_B 81 MAIWVQAENMLGSSE-SPKLCL-DPM------------------------------------------------------ 104 (215)
T ss_dssp EEEEEEEEETTEEEE-CCCEEE-CGG------------------------------------------------------
T ss_pred EEEEEEEECCCCCcc-CccEEE-chH------------------------------------------------------
Confidence 999999999999642 110000 000
Q ss_pred eecccccccccccCceeEEEEeeecccCCeeEEEeeccCCchhhhhhheeeeeeeccCCCceEeecccccCCcceEEEEE
Q psy7042 818 VYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFE 897 (2245)
Q Consensus 818 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 897 (2245)
T Consensus 105 -------------------------------------------------------------------------------- 104 (215)
T 1cd9_B 105 -------------------------------------------------------------------------------- 104 (215)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EecCCCCCcccEEeee------eCceEEEEecCCCCCCCCccceEEEeee-ecCCCceEEecc-eeeeceEEEecCCCCc
Q psy7042 898 VLDRPHPPENLHADEF------AGDSLTLYWTPPRDNGGSEITNYVVEKK-DYNSTVWTKVSS-YVTTPFVRVRNLAIGS 969 (2245)
Q Consensus 898 ~~~~P~~p~~l~~~~~------~~~~~~l~W~~p~~~~g~~i~~y~i~~~-~~~~~~~~~~~~-~~~~~~~~i~~L~p~~ 969 (2245)
-...|.||.++.+... ..+++.|+|++|.. +|..+.+|+|+|+ ..+...|..+.. ......+.|.+|.|++
T Consensus 105 ~~v~p~pP~~~~~~~~~~~~~~~~~~~~l~W~~p~~-~~~~~l~Y~v~y~~~~~~~~w~~~~~~~~~~~~~~l~~L~p~t 183 (215)
T 1cd9_B 105 DVVKLEPPMLQALDIGPDVVSHQPGCLWLSWKPWKP-SEYMEQECELRYQPQLKGANWTLVFHLPSSKDQFELCGLHQAP 183 (215)
T ss_dssp GGBCCCCCEEEECCC-------CCSCEEEEEECCGG-GTTSCEEEEEEEEESSTTCCCEEEEEEESCEEEEEECCCCSCS
T ss_pred HceEeCCCcEEEEEEeccccCCCCCeEEEEEeCCCC-CCeEEEEEEEEEccCCCCCCcEEEecccCcceEEEEcCCCCCC
Confidence 0026889999888776 67889999999875 3435579999999 667777876532 2345789999999999
Q ss_pred eeeEEEEEEeccccCCCccccCcccccCCCC
Q psy7042 970 TYEFRVMAENQYGLSKPALTIDPIKAKHPFD 1000 (2245)
Q Consensus 970 ~y~~~v~a~n~~g~~~~s~~~~~~~~~t~~~ 1000 (2245)
.|.|+|+|.+..|.|.++..+..+.++|++.
T Consensus 184 ~Y~~~Vra~~~~g~G~wS~wS~~~~~~T~e~ 214 (215)
T 1cd9_B 184 VYTLQMRCIRSSLPGFWSPWSPGLQLRPTMK 214 (215)
T ss_dssp CEEEEEEEEESSSCCCCCCCCCCEEECCCC-
T ss_pred EEEEEEEeeECCCCCCCcCCCCccceecCCC
Confidence 9999999999999988888888887777653
No 429
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.47 E-value=2.5e-13 Score=127.00 Aligned_cols=91 Identities=15% Similarity=0.226 Sum_probs=81.6
Q ss_pred CCCCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECCeeccCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEEc
Q psy7042 88 GEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYN 167 (2245)
Q Consensus 88 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 167 (2245)
..+|.|+.++.++.+.+|+.++|.|.+.+ |.+.|.|+|||..|..+.++.+..+++..+|.|.+++.+|+|.|+|.|.|
T Consensus 3 ~~~~~~~~~~~~~~v~~G~~v~l~C~v~~-~~~~v~W~k~g~~i~~~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a~n 81 (93)
T 1waa_A 3 MALIEVEKPLYGVEVFVGETAHFEIELSE-PDVHGQWKLKGQPLAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAAN 81 (93)
T ss_dssp CCCCCEEECCCCEEEETTSCEEEEEEESS-SSCCCEEEETTEECCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEETT
T ss_pred CCCcEeeccCcceEEeCCCCEEEEEEECC-CCCeEEEEECCEECcCCCCEEEEEECCEEEEEECCCChhhCEEEEEEECC
Confidence 46899999999999999999999999986 45789999999999998999999888888999999999999999999988
Q ss_pred CcccceeEEEEEecCC
Q psy7042 168 SVGFAHTSSRVKIGTP 183 (2245)
Q Consensus 168 ~~g~~~~~~~l~V~~~ 183 (2245)
. .+++.|.|..+
T Consensus 82 ~----~~sa~L~V~~~ 93 (93)
T 1waa_A 82 T----KSAANLKVKEL 93 (93)
T ss_dssp E----EEEEEEEEECC
T ss_pred C----cEEEEEEEEcC
Confidence 4 46788888653
No 430
>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A
Probab=99.47 E-value=6.1e-13 Score=149.40 Aligned_cols=186 Identities=19% Similarity=0.222 Sum_probs=134.0
Q ss_pred cCCCCCcccEEeeeeCceEEEEecCCCCCCCCccceEEEeeeecCCCceEEecc----eeeeceEEEecCCCCceeeEEE
Q psy7042 900 DRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSS----YVTTPFVRVRNLAIGSTYEFRV 975 (2245)
Q Consensus 900 ~~P~~p~~l~~~~~~~~~~~l~W~~p~~~~g~~i~~y~i~~~~~~~~~~~~~~~----~~~~~~~~i~~L~p~~~y~~~v 975 (2245)
.+|++|.+|.+......++.++|+++.+.+ ....|.|.|+......|..... ......+.+.+|.+++.|.|+|
T Consensus 2 ~pP~~P~nl~c~~~~~~~~~c~W~p~~~~~--~~~~Y~l~y~~~~~~~~~~c~~~~~~~~~~c~~~~~~l~~~~~Y~~~V 79 (210)
T 3n06_B 2 LPPGKPEIFKCRSPNKETFTCWWRPGTDGG--LPTNYSLTYHREGETLMHECPDYITGGPNSCHFGKQYTSMWRTYIMMV 79 (210)
T ss_dssp CCCCCCEEEEEEBSSSSCEEEEEECCSSSC--CCSEEEEEEEETTCCCCEECSCSSTTCTTEEEECGGGCCSSSCEEEEE
T ss_pred CCCCCCeEeEEEeCCCCeEEEEECCCCCCC--CCceEEEEEEECCCCccccCCCCCCCCCeEEEeCCCCcccceeEEEEE
Confidence 489999999999888999999999987543 3478999999766666766532 1223445556799999999999
Q ss_pred EEEeccccCCCccccCcccccCC-CCCCCCCCCCeeEeec----CCeEEEEecCCCCCC---CCccceEEEEEEecCCcc
Q psy7042 976 MAENQYGLSKPALTIDPIKAKHP-FDVPGAPGAPKGVDST----EDSISLVWSKPRHDG---GSPIQRYIVEKRLISDDK 1047 (2245)
Q Consensus 976 ~a~n~~g~~~~s~~~~~~~~~t~-~~~p~~p~~~~~~~~~----~~~v~l~W~~p~~~~---~~~i~~y~v~~~~~~~~~ 1047 (2245)
.|.|..|.+... .+.+.+. ...|.+|.++.+.... .+++.|+|++|.... |..+.+|.|+|+..++..
T Consensus 80 ~A~N~~G~~~s~----~~~~~~~~~v~p~pP~~l~~~~~~~~~~~~~l~l~W~~p~~~~~~~g~~~~~Y~v~y~~~~~~~ 155 (210)
T 3n06_B 80 NATNQMGSSFSD----ELYVDVTYIVQPDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAE 155 (210)
T ss_dssp EEEETTEEEECC----CEEECGGGCBCCCCCEEEEEEEECCSSSCCEEEEEEECCTTCCCTTSSCCEEEEEEEECTTCSS
T ss_pred EEEcCCCCeeCC----cEEEchhheEecCCCceEEEEEecCcCCCceEEEEcCCCCCccccCCeEEEEEEEEEecCCCCC
Confidence 999999987432 2222222 2457788888887653 589999999987543 324689999999877666
Q ss_pred ceeccccccCCcceeEEEEeecccccCCccCchhhhhhhhhcccccccccccCCcEEEEEEEEEecCCC-CCCCCCCcc
Q psy7042 1048 WIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQ-GPWSSSSDI 1125 (2245)
Q Consensus 1048 ~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~v~A~n~~G~-~~~s~~~~~ 1125 (2245)
|..... .... .+.|.+|.+++.|.|+|+|.+..|. |.+|....+
T Consensus 156 ~~~~~~----~~~~------------------------------~~~l~~L~p~t~Y~v~Vra~~~~g~wS~wS~~~~~ 200 (210)
T 3n06_B 156 WEIHFA----GQQT------------------------------EFKILSLHPGQKYLVQVRCKPDHGYWSAWSPATFI 200 (210)
T ss_dssp CEEEEE----ETCS------------------------------EEEECCCCTTCEEEEEEEEEESSSCCCCCCCCEEE
T ss_pred CEEEec----cCce------------------------------EEEEeccCCCCEEEEEEEEecCCCcccCCCCceeE
Confidence 643210 0011 1269999999999999999998765 555544433
No 431
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.47 E-value=6.4e-13 Score=151.72 Aligned_cols=177 Identities=15% Similarity=0.212 Sum_probs=116.9
Q ss_pred CceEEcCCCeEEEEEEecCcC--CCeEEEeeCC--Ee---c-------------cCCceEEEEe--cCcEEEEEEeeecc
Q psy7042 1705 KDLVVPLGKLLTLQCEATGTP--VPKCRWLRNG--RE---I-------------SSGARYRVET--AGGVFRLHFNEVTD 1762 (2245)
Q Consensus 1705 ~~~~~~~G~~v~L~C~~~~~p--~~~v~W~~~~--~~---l-------------~~~~~~~~~~--~~~~~~L~i~~v~~ 1762 (2245)
..+.+.+|++++|.|.+.+.+ .+.+.|+|.. .. + ....|+.+.. .++.++|+|.+++.
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 87 (232)
T 1dn0_B 8 GAGLLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTA 87 (232)
T ss_dssp CCCEECTTSCEEEEEEEESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECSCCG
T ss_pred CCEEEeCCCcEEEEEEEccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEECCCCc
Confidence 447899999999999998764 5689999842 21 1 0135666654 34677899999999
Q ss_pred CCCeEEEEEEe--cCcee----eEEEEEEEecC----CCccccCCCceEEcCC-CeEEEEEEEecc-CCc-EEEEEE-CC
Q psy7042 1763 VDNGDYTCEAY--NSVGF----AHTSSRVKIGT----PPRIDRMPNALYIPEG-DNTKVKIFYAGD-QPM-EVSLTK-NG 1828 (2245)
Q Consensus 1763 ~d~G~Y~C~~~--n~~g~----~~~~~~l~V~~----~p~~~~~~~~~~~~~g-~~~~l~C~~~~~-p~~-~v~W~~-~g 1828 (2245)
+|+|.|.|.+. +..+. ......|.|.. +|.+........+..| +.++|.|.+.+. |.+ .++|++ ||
T Consensus 88 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~~~~g~~~v~L~C~~~g~~P~p~~v~W~~~~g 167 (232)
T 1dn0_B 88 ADTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGSASAPTLFPLVSCENSPSDTSSVAVGCLAQDFLPDSITFSWKYKNN 167 (232)
T ss_dssp GGCEEEEEEECSSTTSCSCCSEECCCEEEEECSSCCBCCEEEEEECC------CCSEEEEEEEEEEBSSCCEEEEEETTS
T ss_pred ccCEEEEEEEecCCcCCchhhhcccceEEEEccCCCCCCceEEeccccccCCCCCcEEEEEEEEEEeCCCeEEEEEcCCC
Confidence 99999999998 42111 12235777765 3444322212234578 999999999986 766 999999 99
Q ss_pred EEeecCCce-EEEEcC---CeEEEEEcccCc--ccceEEEEEEEcCCeeeEEEEEEEEe
Q psy7042 1829 RVVQSDDRF-KFTVLD---DYIIIFIKEIRK--EDAGDYTVNLSNSSGSVSGTFTINIT 1881 (2245)
Q Consensus 1829 ~~l~~~~~~-~~~~~~---~~~~l~i~~~~~--~d~G~Y~C~a~n~~g~~~~~~~l~v~ 1881 (2245)
+.+.....+ .....+ ....|.|..... +|.|.|+|.|.|..+.......+.+.
T Consensus 168 ~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~ytC~v~n~~~~~~~~~~i~~~ 226 (232)
T 1dn0_B 168 SDISSTRGFPSVLRGGKYAATSQVLLPSKDVMAGTDEHVVCKVQHPNGNKEKNVPLPVI 226 (232)
T ss_dssp CEECCEEECCCEEETTEEEEEEEEEECTTCC---CCCEEEEEEECTTCCEEEEEECCC-
T ss_pred CceeeEEECCccccCCcEEEEEEEEEcHHHhcccCCCeEEEEEEeCCCCcceeEecCCC
Confidence 877430000 000011 124688888876 78999999999999987776666554
No 432
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.47 E-value=1.5e-13 Score=157.04 Aligned_cols=173 Identities=12% Similarity=0.170 Sum_probs=117.7
Q ss_pred CCceEEcCCCeEEEEEEecCcCC----CeEEEeeC--CEecc----------------CCceEEEEec--CcEEEEEEee
Q psy7042 1704 LKDLVVPLGKLLTLQCEATGTPV----PKCRWLRN--GREIS----------------SGARYRVETA--GGVFRLHFNE 1759 (2245)
Q Consensus 1704 ~~~~~~~~G~~v~L~C~~~~~p~----~~v~W~~~--~~~l~----------------~~~~~~~~~~--~~~~~L~i~~ 1759 (2245)
+..+.+.+|++++|.|.+.+.+. +.+.|+|+ +..+. ...|+.+..+ .+..+|.|.+
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 86 (228)
T 3bae_H 7 SGPGLLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKITS 86 (228)
T ss_dssp ECCSEECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEECS
T ss_pred CCceeecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEcC
Confidence 34578999999999999988764 78999884 22210 1246666542 3567899999
Q ss_pred eccCCCeEEEEEEecCce------e---eEEEEEEEecC----CCccccCCCceEEcCCCeEEEEEEEecc-CCc-EEEE
Q psy7042 1760 VTDVDNGDYTCEAYNSVG------F---AHTSSRVKIGT----PPRIDRMPNALYIPEGDNTKVKIFYAGD-QPM-EVSL 1824 (2245)
Q Consensus 1760 v~~~d~G~Y~C~~~n~~g------~---~~~~~~l~V~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~v~W 1824 (2245)
++.+|+|.|.|.+.+..| . ......|.|.. +|.+...+....+.+|+.++|.|.+.|. |.+ .|.|
T Consensus 87 v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~~~l~C~~~g~~P~p~~v~W 166 (228)
T 3bae_H 87 VDTADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTW 166 (228)
T ss_dssp CCGGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCCCBCCEEEEECC-----CCSEEEEEEEEEEEBSSCCEEEE
T ss_pred CCcccCEEEEEEEecCCCccccccceeeeCCcEEEEecCCCCCCCEEEEecccccccCCCCEEEEEEEccEeCCCEEEEE
Confidence 999999999999998654 1 11236777763 4555433333346789999999999986 777 9999
Q ss_pred EECCEEeecCCceEEEEcC---CeEEEEEcccCcccceEEEEEEEcCCeeeEEEEE
Q psy7042 1825 TKNGRVVQSDDRFKFTVLD---DYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFT 1877 (2245)
Q Consensus 1825 ~~~g~~l~~~~~~~~~~~~---~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 1877 (2245)
++++..+.......+...+ ....|.|..+..+| |.|+|.|.|..|.......
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~-g~YtC~~~n~~~~~~~~~~ 221 (228)
T 3bae_H 167 NSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-ESITCNVAHPASSTKVDKK 221 (228)
T ss_dssp GGGTCCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEEE
T ss_pred eeCCcccCceEcCceeCCCcEEEEEEEEEEhhhcCC-CcEEEEEEECCCCCCEEEE
Confidence 9988753211111111111 12468888888866 9999999999987665443
No 433
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}
Probab=99.46 E-value=4.4e-13 Score=149.55 Aligned_cols=188 Identities=19% Similarity=0.282 Sum_probs=130.1
Q ss_pred CCCCCeeeeec--CCcEEEEeeCCCCCCCcccccEEEEeeeCCC-CCeEEEc-eeeeeeEEEecCCCCCEEEEEEEEEec
Q psy7042 672 PPQFPTVEDIG--HDSLALVWRAPIWDGGSNITNYIVEKREHPM-SSWIRVG-NTRFTTMAITGLSPGHQYEFRVYAENV 747 (2245)
Q Consensus 672 ~p~~~~~~~~~--~~si~lsW~~p~~~~~~~~~~y~v~~~~~~~-~~w~~~~-~~~~~~~~i~~L~p~t~y~~~v~a~n~ 747 (2245)
+|.++.+.+++ .+++.|+|.+| +++.+.+|.|+|+.... ..|.... ......+.|.+|+|++.|.|+|.|.|.
T Consensus 2 ~P~~l~v~~v~~~~~si~l~W~~p---~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~n~ 78 (201)
T 2ha1_A 2 GPVEVFITETPSQPNSHPIQWNAP---QPSHISKYILRWRPKNSVGRWKEATIPGHLNSYTIKGLKPGVVYEGQLISIQQ 78 (201)
T ss_dssp CCCEEECCSCSCCSSCEEEEEECC---SSTTCCEEEEEEEETTCSSCCEEEEECTTCCEEEECSCCTTEEEEEEEEEECT
T ss_pred CceeEEEEecCCCCCEEEEEEeCC---CCCCceEEEEEEEECCCCCceEEEecCCCccEEEecCCCCCCEEEEEEEEEec
Confidence 57778888877 99999999976 35689999999997543 5565543 223568999999999999999999999
Q ss_pred ccCCCCCCCCccEEecCccccccccccccccCCCceeecccccccccCCceEEEEeeeccCccccccccceecccccccc
Q psy7042 748 YGRSDPSTTSDLITTKDTFKKQIKKRQYDFDETGKKIRGKADEKVSDYDQYVFDIYSKYVPQPVDIKTSSVYDHYDILEE 827 (2245)
Q Consensus 748 ~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 827 (2245)
.|.+.++ ...+.+.....+...
T Consensus 79 ~G~~~~~-~~~~~t~~~~~~~~~--------------------------------------------------------- 100 (201)
T 2ha1_A 79 YGHQEVT-RFDFTTTSTSTPVTS--------------------------------------------------------- 100 (201)
T ss_dssp TSCEEEE-EEEEEECCCCCTTCS---------------------------------------------------------
T ss_pred ccccCce-eEEEecCCCCCCccc---------------------------------------------------------
Confidence 9987543 111111111000000
Q ss_pred cccCceeEEEEeeecccCCeeEEEeeccCCchhhhhhheeeeeeeccCCCceEeecccccCCcceEEEEEEecCCCCCcc
Q psy7042 828 IGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFEVLDRPHPPEN 907 (2245)
Q Consensus 828 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~p~~ 907 (2245)
...... ....+|..|.+
T Consensus 101 --------------------------------------------------------~~~~~~-------~~~~p~~~~~~ 117 (201)
T 2ha1_A 101 --------------------------------------------------------NTVTGE-------TTPFSPLVATS 117 (201)
T ss_dssp --------------------------------------------------------CCCCCS-------CCCCCCSCSCC
T ss_pred --------------------------------------------------------ccccCC-------CCCCCCccCCc
Confidence 000000 00001112267
Q ss_pred cEEeeeeCceEEEEecCCCCCCCCccceEEEeeeecCCCce-EEecceeeeceEEEecCCCCceeeEEEEEEeccccCCC
Q psy7042 908 LHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVW-TKVSSYVTTPFVRVRNLAIGSTYEFRVMAENQYGLSKP 986 (2245)
Q Consensus 908 l~~~~~~~~~~~l~W~~p~~~~g~~i~~y~i~~~~~~~~~~-~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~ 986 (2245)
+.+...+.+++.|+|.+|. ..+.+|.|+|.......+ ...........+.|.+|.|++.|.|+|+|.|..|.|.+
T Consensus 118 l~~~~~~~~sv~l~W~~p~----~~i~~Y~v~~~~~~~~~~~~~~~v~~~~~~~~i~~L~p~t~Y~~~V~A~~~~G~~~~ 193 (201)
T 2ha1_A 118 ESVTEITASSFVVSWVSAS----DTVSGFRVEYELSEEGDEPQYLDLPSTATSVNIPDLLPGRKYIVNVYQISEDGEQSL 193 (201)
T ss_dssp SSCCCCCSCCEEEECCCSC----TTEEEEEEEEEETTTCCCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEETTSCEEE
T ss_pred eEEEecCCCeEEEEEeCCC----CCccEEEEEEEECCCCCceeEEEcCCceeEEEeCCCCCCCEEEEEEEEEcCCCCccc
Confidence 8888889999999999983 289999999987543333 33344456788999999999999999999999998765
Q ss_pred c
Q psy7042 987 A 987 (2245)
Q Consensus 987 s 987 (2245)
.
T Consensus 194 ~ 194 (201)
T 2ha1_A 194 I 194 (201)
T ss_dssp E
T ss_pred E
Confidence 4
No 434
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.46 E-value=4.4e-13 Score=153.95 Aligned_cols=176 Identities=14% Similarity=0.195 Sum_probs=118.3
Q ss_pred CcceEEeCCCeEEEEEEEeeecC----CceEEEEC--Cee---c---c----------------CCCeEEEEEc--CcEE
Q psy7042 97 LKDLVVPLGKLLTLQCEATGTPV----PKCRWLRN--GRE---I---S----------------SGARYRVETA--GGVF 146 (2245)
Q Consensus 97 ~~~~~v~~G~~v~L~C~~~g~p~----~~i~W~~~--g~~---l---~----------------~~~~~~~~~~--~~~~ 146 (2245)
+..+.+.+|++|+|.|.+.+.+. ..+.|+|. +.. + . ..+|+.+..+ .+..
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~ 86 (239)
T 3tv3_H 7 SGPTLVEASETLSLTCAVSGDSTAACNSFWGWVRQPPGKGLEWVGSLSHCASYWNRGWTYHNPSLKSRLTLALDTPKNLV 86 (239)
T ss_dssp ESCSEECTTSCEEEEEEEESSCTTSSSCEEEEEEECTTSCCEEEEEEECCCCTTSSCEEEECTTTGGGEEEEEEGGGTEE
T ss_pred CCCEEEcCCCCEEEEEEEcCCcccccceEEEEEEECCCCCcEEEEEEecccccccCCceecCccccCCEEEEEECCCCEE
Confidence 44578899999999999987653 37999983 211 1 1 1246766543 4567
Q ss_pred EEEEeeeccCCCeEEEEEEEcCcc-------------cceeEEEEEec----CCCeeecCCCceEEcCCCeEEEEEEEec
Q psy7042 147 RLHFNEVTDVDNGDYTCEAYNSVG-------------FAHTSSRVKIG----TPPRIDRMPNALYIPEGDNTKVKIFYAG 209 (2245)
Q Consensus 147 ~L~i~~~~~~d~G~Y~C~a~n~~g-------------~~~~~~~l~V~----~~P~~~~~~~~~~v~~G~~~~l~C~~~g 209 (2245)
+|.|.+++.+|+|.|.|.+.+..+ .......|.|. .+|.+...+....+.+|+.++|.|.+.+
T Consensus 87 ~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~~ 166 (239)
T 3tv3_H 87 FLKLNSVTAADTATYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKD 166 (239)
T ss_dssp EEEECSCCGGGCEEEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEECCCCCBCCEEEEECCCCCC--TTEEEEEEEEEE
T ss_pred EEEECCCChhhCEEEEEEEecCccccccccccccceeeeCCCcEEeeccCCCcCCEEEEECCChhhccCCcEEEEEEEee
Confidence 899999999999999999987632 11123456664 3456654444455567999999999987
Q ss_pred -CCCc-eEEEeeCceeeecCCceEEEEeCC----eEEEEEcccCccCceeEEEEEEcCCcceEEEEEEEE
Q psy7042 210 -DQPM-EVSLTKNGRVVQSDDRFKFTVLDD----YIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINI 273 (2245)
Q Consensus 210 -~p~~-~i~W~~~g~~l~~~~~~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 273 (2245)
.|.+ .++|+++|..+...........+. .+.|.|.....+| |.|+|.|.|..+.....+.|.+
T Consensus 167 ~~p~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~l~~ 235 (239)
T 3tv3_H 167 YFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEP 235 (239)
T ss_dssp EBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEECCC
T ss_pred EeCCCeEEEEEECCccCceEecCceECCCCCEEEEEEEEEchhhcCC-CEEEEEEEECCCCceEEEEecc
Confidence 5533 588999987432111000111111 1368899988888 9999999999877766666654
No 435
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.46 E-value=2.8e-13 Score=153.54 Aligned_cols=168 Identities=15% Similarity=0.230 Sum_probs=118.5
Q ss_pred CceEEcCCCeEEEEEEecCcC--CCeEEEeeCC--Ee---cc--------------CCceEEEEec--CcEEEEEEeeec
Q psy7042 1705 KDLVVPLGKLLTLQCEATGTP--VPKCRWLRNG--RE---IS--------------SGARYRVETA--GGVFRLHFNEVT 1761 (2245)
Q Consensus 1705 ~~~~~~~G~~v~L~C~~~~~p--~~~v~W~~~~--~~---l~--------------~~~~~~~~~~--~~~~~L~i~~v~ 1761 (2245)
..+.+.+|++++|.|.+.+.+ .+.+.|+|.. .. +. ...|+.+..+ .+..+|+|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 87 (220)
T 2fbj_H 8 GGGLVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKVR 87 (220)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSCC
T ss_pred CCeEecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCCC
Confidence 457899999999999998765 5689999842 11 10 1256776643 467789999999
Q ss_pred cCCCeEEEEEEecCcee---eEEEEEEEecC----CCccccCCCceEEcCCCeEEEEEEEecc-CC--cEEEEEECCEEe
Q psy7042 1762 DVDNGDYTCEAYNSVGF---AHTSSRVKIGT----PPRIDRMPNALYIPEGDNTKVKIFYAGD-QP--MEVSLTKNGRVV 1831 (2245)
Q Consensus 1762 ~~d~G~Y~C~~~n~~g~---~~~~~~l~V~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~--~~v~W~~~g~~l 1831 (2245)
.+|+|.|.|.+.+..+. ......|.|.. +|.+...+ ...+.+|+.++|.|.+.+. |. +.|.|+++|..+
T Consensus 88 ~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~-~~~~~~g~~v~L~C~~~g~~P~~~~~v~W~~~~~~~ 166 (220)
T 2fbj_H 88 SEDTALYYCARLHYYGYNAYWGQGTLVTVSAESARNPTIYPLT-LPPALSSDPVIIGCLIHDYFPSGTMNVTWGKSGKDI 166 (220)
T ss_dssp GGGCEEEEEEEEETTTEEEEECCCEEEEECSSCCBCCEEEEEC-CCSSSCCSSEEEEEEEEEEBSCCCEEEEESCCCSSC
T ss_pred hhhCEEEEEEEeccccccceecCCEEEEecCCCCCCCEEEEee-cccccCCCcEEEEEEEEeEECCCcEEEEEecCCEec
Confidence 99999999999987542 12235777764 45544333 3345689999999999987 76 799999998765
Q ss_pred ec-CCceEEEEcCC---eEEEEEcccCcccceEEEEEEEcCCeeeE
Q psy7042 1832 QS-DDRFKFTVLDD---YIIIFIKEIRKEDAGDYTVNLSNSSGSVS 1873 (2245)
Q Consensus 1832 ~~-~~~~~~~~~~~---~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~ 1873 (2245)
.. .........+. ...|.|.....+|.|.|+|.|.|..|...
T Consensus 167 ~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~ytC~v~n~~~~~~ 212 (220)
T 2fbj_H 167 TTVNFPPALASGGRYTMSNQLTLPAVECPEGESVKCSVQHDSNPVQ 212 (220)
T ss_dssp EEEECCCEECSSSCEEEEEEEEECGGGSCTTCEEEEEEEETTSCCE
T ss_pred ceEecCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCceE
Confidence 21 01000000011 13588999888999999999999988654
No 436
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.46 E-value=1.7e-13 Score=156.15 Aligned_cols=168 Identities=13% Similarity=0.144 Sum_probs=115.9
Q ss_pred CceEEcCCCeEEEEEEecCcC--CCeEEEeeCC--Eec-----------------cCCceEEEEec--CcEEEEEEeeec
Q psy7042 1705 KDLVVPLGKLLTLQCEATGTP--VPKCRWLRNG--REI-----------------SSGARYRVETA--GGVFRLHFNEVT 1761 (2245)
Q Consensus 1705 ~~~~~~~G~~v~L~C~~~~~p--~~~v~W~~~~--~~l-----------------~~~~~~~~~~~--~~~~~L~i~~v~ 1761 (2245)
..+.+.+|++++|.|.+.+.+ .+.+.|+|+. ..+ ....|+.+..+ .+..+|+|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (225)
T 1op3_H 8 GGGLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKMR 87 (225)
T ss_dssp CCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCeEecCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECCCC
Confidence 457899999999999998766 6789999853 211 01246666543 467789999999
Q ss_pred cCCCeEEEEEEecCce-----e---eEEEEEEEecC----CCccccCCCceEEcCCCeEEEEEEEecc-CCc-EEEEEEC
Q psy7042 1762 DVDNGDYTCEAYNSVG-----F---AHTSSRVKIGT----PPRIDRMPNALYIPEGDNTKVKIFYAGD-QPM-EVSLTKN 1827 (2245)
Q Consensus 1762 ~~d~G~Y~C~~~n~~g-----~---~~~~~~l~V~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~v~W~~~ 1827 (2245)
.+|+|.|.|.+.+..| . ......|.|.. +|.+........+.+|+.++|.|.+.|. |.+ .|.|+++
T Consensus 88 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~ 167 (225)
T 1op3_H 88 VEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSG 167 (225)
T ss_dssp GGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSCBCCEEEEECCCTTCCCCCEEEEEEEEEEEBSSCCEEECCTT
T ss_pred hhhCEEEEEEEecCCCccccccceeecCCEEEecccCCCcCCeEEEecccccccCCCcEEEEEEEEeEECCCeEEEEecC
Confidence 9999999999998764 1 11245777764 3444332212235679999999999986 766 9999999
Q ss_pred CEEeecCCceEEEEcCC----eEEEEEcccCcccceEEEEEEEcCCeeeE
Q psy7042 1828 GRVVQSDDRFKFTVLDD----YIIIFIKEIRKEDAGDYTVNLSNSSGSVS 1873 (2245)
Q Consensus 1828 g~~l~~~~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~ 1873 (2245)
+..+...........++ ...|.|..+..+| |.|+|.|.|..+...
T Consensus 168 ~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~ 216 (225)
T 1op3_H 168 ALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK 216 (225)
T ss_dssp SCCTTCEECCCEECTTSCEEEEEEEEEEGGGTTC-CCCCEEEEEGGGTEE
T ss_pred CCcCCeEecCceeCCCCCEEEEEEEEEechhcCC-CcEEEEEEcCCCCcc
Confidence 87531100000001111 2368999988888 999999999876544
No 437
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.46 E-value=2.8e-13 Score=131.47 Aligned_cols=97 Identities=19% Similarity=0.365 Sum_probs=89.9
Q ss_pred CCCCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECCeeccCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEEc
Q psy7042 88 GEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYN 167 (2245)
Q Consensus 88 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 167 (2245)
..+|.|...+.+..+.+|+.++|.|.+.|.|.|.|.|+|+|..+..+.++.+...++..+|.|.+++.+|+|.|+|.|.|
T Consensus 6 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N 85 (103)
T 3qp3_A 6 DHAPRITLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYTNTSGVLTLEILDCHTDDSGTYRAVCTN 85 (103)
T ss_dssp CEEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCCCEEEeCCcceEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCEEEEECCCEEEEEEcCCCcccCEEEEEEEEe
Confidence 35889999999999999999999999999999999999999999988899998888888999999999999999999999
Q ss_pred CcccceeEEEEEecCCC
Q psy7042 168 SVGFAHTSSRVKIGTPP 184 (2245)
Q Consensus 168 ~~g~~~~~~~l~V~~~P 184 (2245)
..|..+.++.|.|...+
T Consensus 86 ~~G~~~~~~~l~V~~~~ 102 (103)
T 3qp3_A 86 YKGEASDYATLDVTGGD 102 (103)
T ss_dssp TTEEEEEEEEEEEECC-
T ss_pred CCCcEEEEEEEEEECCC
Confidence 99999999999997653
No 438
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.46 E-value=3.9e-13 Score=129.43 Aligned_cols=94 Identities=29% Similarity=0.469 Sum_probs=84.4
Q ss_pred CCceEEeeccceeeecCccEEEEEEEEeeCCCeEEEeeCCEeeCCCC-cEEEEEeCcEEEEEEcCCCCCCCeEEEEEEEe
Q psy7042 2086 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSA-RHHIFAEGDTYTLIINSVYGVDADEYVCRAVN 2164 (2245)
Q Consensus 2086 ~~p~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~-~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N 2164 (2245)
.+|.|...+.+..+.+|+.++|.|.+.|.|.|.|.|+|+|..+.... ++.+..++....|.|.++..+|+|.|+|.|.|
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N 83 (99)
T 1u2h_A 4 APPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAVN 83 (99)
T ss_dssp EEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCBTTEEEEECGGGEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCEEEEcCCceEecCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCCEEEEEEccCCcCCCEEEEEEEEE
Confidence 46889888888999999999999999999999999999999987664 45556677777899999999999999999999
Q ss_pred CCceeeEEEEEEEEc
Q psy7042 2165 KGGVKSTKAELIIMT 2179 (2245)
Q Consensus 2165 ~~G~~~~~~~l~V~~ 2179 (2245)
..|..+.++.|.|..
T Consensus 84 ~~g~~~~~~~l~V~~ 98 (99)
T 1u2h_A 84 EYGARQCEARLEVRG 98 (99)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCCceeEEEEEEEEC
Confidence 999999999999864
No 439
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.46 E-value=2.2e-13 Score=128.92 Aligned_cols=90 Identities=21% Similarity=0.397 Sum_probs=79.2
Q ss_pred CceEEeeccceeeecCccEEEEEEEEeeCCCeEEEeeCC--EeeCCCCcEEEEEeCcEEEEEEcCCCCCCCeEEEEEEEe
Q psy7042 2087 APEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGS--REITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVN 2164 (2245)
Q Consensus 2087 ~p~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g--~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N 2164 (2245)
+|.|...+.+..+.+|+.+.|.|.+.|.|.|.|.|+|+| ..+.... .+........|.|.++..+|+|.|+|.|.|
T Consensus 2 ~P~i~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~~--~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N 79 (93)
T 1wit_A 2 KPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPEL--LVDAKSSTTSIFFPSAKRADSGNYKLKVKN 79 (93)
T ss_dssp CCEECCCCCEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTTS--EEEEETTEEEEECTTBCGGGCEEEEEEEEE
T ss_pred CCeEEcCCCceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCcE--EEEecCCEEEEEECCCChhcCEEEEEEEEc
Confidence 578877788889999999999999999999999999999 8887654 444556667899999999999999999999
Q ss_pred CCceeeEEEEEEEE
Q psy7042 2165 KGGVKSTKAELIIM 2178 (2245)
Q Consensus 2165 ~~G~~~~~~~l~V~ 2178 (2245)
.+|..+.++.|.|+
T Consensus 80 ~~G~~~~~~~l~V~ 93 (93)
T 1wit_A 80 ELGEDEAIFEVIVQ 93 (93)
T ss_dssp TTEEEEEEEEEEEC
T ss_pred CCCeEEEEEEEEEC
Confidence 99999999999873
No 440
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.45 E-value=1e-13 Score=126.06 Aligned_cols=82 Identities=17% Similarity=0.348 Sum_probs=73.7
Q ss_pred ccceeeecCccEEEEEEEEeeCCCeEEEeeCCEeeCCCCcEEEEEeCcEEEEEEcCCCCCCCeEEEEEEEeCCceeeEEE
Q psy7042 2094 LRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKA 2173 (2245)
Q Consensus 2094 ~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~ 2173 (2245)
+.++.+.+|+.++|.|.+.| |.|.|+|+|||.+|..+.++.+..++..+.|.|.++..+|+|.|+|.|.| .+.++
T Consensus 3 lt~v~~~~G~~v~l~C~vs~-p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n----~~~~a 77 (84)
T 2lu7_A 3 MTRVRSTPGGDLELVVHLSG-PGGPVRWYKDGERLASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDAPQ----DSRIF 77 (84)
T ss_dssp CCCEEECTTSCEEEECCCSC-CSTTCEEEETTEECCCCSSEEEEECSSCEEEEESSCSSTTCEEEEEECTT----TCEEE
T ss_pred CeEEEEecCCCEEEEEEECC-CCcEEEEEECCEEccccccEEEeecCCeEEEEecCCCCcccEEEEEEECC----EEEEE
Confidence 46778999999999999976 99999999999999999999999999889999999999999999998755 56788
Q ss_pred EEEEEcC
Q psy7042 2174 ELIIMTA 2180 (2245)
Q Consensus 2174 ~l~V~~~ 2180 (2245)
.|.|.+|
T Consensus 78 ~l~V~eP 84 (84)
T 2lu7_A 78 LVSVEEP 84 (84)
T ss_dssp EEEECCC
T ss_pred EEEEECC
Confidence 8988653
No 441
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.45 E-value=3e-13 Score=133.75 Aligned_cols=101 Identities=23% Similarity=0.464 Sum_probs=89.4
Q ss_pred cCCCceEEeeccceeeecCccEEEEEEEEeeCCCeEEEeeCCEeeCC-CCcEEEEEeC-cEEEEEEcCCCCCCCeEEEEE
Q psy7042 2084 AAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITP-SARHHIFAEG-DTYTLIINSVYGVDADEYVCR 2161 (2245)
Q Consensus 2084 ~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~-~~~~~~~~~~-~~~~L~i~~v~~~d~G~Y~C~ 2161 (2245)
...+|.|...+.++.+.+|+.++|.|.+.|.|.|.|.|+|+|..+.. ..++.+..++ ....|.|.++..+|+|.|+|.
T Consensus 12 ~~~~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 91 (116)
T 2kkq_A 12 HKRAPMFIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWYTVS 91 (116)
T ss_dssp CCBCCCBSSCCCCEEEETTEEEEEEEEBCCBSCCEEEEEETTEECCCCBTTEEEEECTTCEEEEEEEEECGGGCEEEEEE
T ss_pred CCCCCeEEeCCCcEEEeCCCcEEEEEEEeccCCCEEEEEECCEECcCCCCeEEEEeCCCCeEEEEECCCCcccCEEEEEE
Confidence 34468999999999999999999999999999999999999999885 4677777665 345899999999999999999
Q ss_pred EEeCCceeeEEEEEEEEcCCCCC
Q psy7042 2162 AVNKGGVKSTKAELIIMTAPKFN 2184 (2245)
Q Consensus 2162 a~N~~G~~~~~~~l~V~~~p~~~ 2184 (2245)
|.|..|..+..+.|.|..+|...
T Consensus 92 a~N~~G~~~~~~~l~V~~~p~~~ 114 (116)
T 2kkq_A 92 AVNEAGVTTCNTRLDVTARPNQT 114 (116)
T ss_dssp EEETTEEEEEEEEEEEECCSCCC
T ss_pred EEcCCCeEEEEEEEEEeCCCCCC
Confidence 99999999999999999877654
No 442
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.45 E-value=2.6e-13 Score=130.92 Aligned_cols=95 Identities=23% Similarity=0.435 Sum_probs=83.3
Q ss_pred CCceEEeeccceeeecCccEEEEEEEEeeCCCeEEEeeCCEeeCCCCcEEE-EEeCcEEEEEEcCCCCCCCeEEEEEEEe
Q psy7042 2086 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHI-FAEGDTYTLIINSVYGVDADEYVCRAVN 2164 (2245)
Q Consensus 2086 ~~p~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~-~~~~~~~~L~i~~v~~~d~G~Y~C~a~N 2164 (2245)
.+|.|...+.+..+.+|+.++|.|.+.|.|.|.|.|+|+|..+....++.+ ..++....|.|.++..+|+|.|+|.|.|
T Consensus 4 ~~P~~~~~p~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 83 (100)
T 2kdg_A 4 GPPRFIQVPENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVAKN 83 (100)
T ss_dssp EEEECCCCCCCEEEETTCCEEEEEECEEESCCEEEEEETTEEECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCeEEeCCCCEEecCCCEEEEEEEEEeeCCCEEEEEECCEECcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEEEEc
Confidence 468888888888999999999999999999999999999999987764333 3445557899999999999999999999
Q ss_pred CCceeeEEEEEEEEcC
Q psy7042 2165 KGGVKSTKAELIIMTA 2180 (2245)
Q Consensus 2165 ~~G~~~~~~~l~V~~~ 2180 (2245)
..|..+.++.|.|..+
T Consensus 84 ~~g~~~~~~~l~V~~~ 99 (100)
T 2kdg_A 84 RAGEATFTVQLDVLAK 99 (100)
T ss_dssp TTEEEEEEEEEEEECC
T ss_pred CCCeEEEEEEEEEEec
Confidence 9999999999999764
No 443
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.45 E-value=5.8e-13 Score=153.12 Aligned_cols=172 Identities=15% Similarity=0.227 Sum_probs=116.6
Q ss_pred CCcceEEeCCCeEEEEEEEee--ecCCceEEEEC--Cee---c--------------cCCCeEEEEEc--CcEEEEEEee
Q psy7042 96 PLKDLVVPLGKLLTLQCEATG--TPVPKCRWLRN--GRE---I--------------SSGARYRVETA--GGVFRLHFNE 152 (2245)
Q Consensus 96 ~~~~~~v~~G~~v~L~C~~~g--~p~~~i~W~~~--g~~---l--------------~~~~~~~~~~~--~~~~~L~i~~ 152 (2245)
.+..+.+.+|++|+|.|.+.+ .+...+.|+|. +.. + ...+|+.+..+ .+..+|+|.+
T Consensus 5 ~~~~v~v~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 84 (248)
T 3u2s_H 5 ESGGGVVQPGSSLRLSCAASGFDFSRQGMHWVRQAPGQGLEWVAFIKYDGSEKYHADSVWGRLSISRDNSKDTLYLQMNS 84 (248)
T ss_dssp EECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEEGGGTEEEEEECS
T ss_pred cCCCEEEeCCCCEEEEEEeccccCCccEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECC
Confidence 455678999999999999975 34567999983 211 1 01247776543 4577899999
Q ss_pred eccCCCeEEEEEEEcCc----------------------ccceeEEEEEec----CCCeeecCCCceEEcCCCeEEEEEE
Q psy7042 153 VTDVDNGDYTCEAYNSV----------------------GFAHTSSRVKIG----TPPRIDRMPNALYIPEGDNTKVKIF 206 (2245)
Q Consensus 153 ~~~~d~G~Y~C~a~n~~----------------------g~~~~~~~l~V~----~~P~~~~~~~~~~v~~G~~~~l~C~ 206 (2245)
++.+|+|.|.|.+.+.. ........|.|. .+|.+...+....+..|+.++|.|.
T Consensus 85 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~ 164 (248)
T 3u2s_H 85 LRVEDTATYFCVREAGGPDYRNGYNYYDFYDGYYNYHYMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCL 164 (248)
T ss_dssp CCGGGCEEEEEEEEEEECEEETTEEEECGGGCCEEEEEEEEECCCEEEEECSCCCBCCEEEEECCC------CEEEEEEE
T ss_pred CCHHHCEEEEEEEeCCCCccccccccccccccccccccceeeCCCEEEEEcccCCCCCEEEEeCCCccccCCCcEEEEEE
Confidence 99999999999998742 112224567776 3556654444455667999999999
Q ss_pred Eec-CC-CceEEEeeCceeeec---------CCceEEEEeCCeEEEEEcccCccCceeEEEEEEcCCcceEEEEEEEE
Q psy7042 207 YAG-DQ-PMEVSLTKNGRVVQS---------DDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINI 273 (2245)
Q Consensus 207 ~~g-~p-~~~i~W~~~g~~l~~---------~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 273 (2245)
+.+ .| .+.++|+++|..+.. +..+.+ .+.|.|.....+| |.|+|.|.|..+.......|.+
T Consensus 165 ~~~~~P~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~-----~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~l~~ 236 (248)
T 3u2s_H 165 VKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSL-----SSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEP 236 (248)
T ss_dssp EEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEE-----EEEEEEEGGGBTT-BCCEEEEEEGGGTEEEEEECCC
T ss_pred EeeEECCCeEEEEeECCccCceeecCceECCCCCEEE-----EEEEEEChhhcCC-CeEEEEEEECCCCcceEEEEcc
Confidence 987 55 567999999864321 122221 2368888888888 9999999998877666655554
No 444
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.44 E-value=7.5e-13 Score=147.55 Aligned_cols=168 Identities=17% Similarity=0.197 Sum_probs=110.8
Q ss_pred eecCCcceEEeCCCeEEEEEEEeeecCCceEEEECC--e---ec-------cCCCeEEEEEc---CcEEEEEEeeeccCC
Q psy7042 93 FIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNG--R---EI-------SSGARYRVETA---GGVFRLHFNEVTDVD 157 (2245)
Q Consensus 93 ~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g--~---~l-------~~~~~~~~~~~---~~~~~L~i~~~~~~d 157 (2245)
++..|..+.+.+|++++|.|.+.+.+ +.|.|+|.+ . .+ ...+|+.+..+ .+...|.|.+++.+|
T Consensus 4 v~q~p~~v~v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~~D 82 (207)
T 1ypz_E 4 VEQSPSALSLHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQLED 82 (207)
T ss_dssp EEESCSEEEEETTCCEEEEEEESSCC-SEEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCGGG
T ss_pred cEECCCeEEEccCCcEEEEEEEeCCC-eEEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCHHH
Confidence 45567788999999999999998654 479999843 2 11 02357777755 567789999999999
Q ss_pred CeEEEEEEEcCcc---------cc--eeEEEEEecCCCeeecCCCceEEcCCCeEEEEEEEecC-CC-ceEEEeeCceee
Q psy7042 158 NGDYTCEAYNSVG---------FA--HTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGD-QP-MEVSLTKNGRVV 224 (2245)
Q Consensus 158 ~G~Y~C~a~n~~g---------~~--~~~~~l~V~~~P~~~~~~~~~~v~~G~~~~l~C~~~g~-p~-~~i~W~~~g~~l 224 (2245)
+|.|.|.+.+..+ .. ...+.|+|...+.....| .+.+..+ .++|.|.+.|. |. +.|+|+++ ..+
T Consensus 83 ~G~Y~C~~~~~~~~~p~~~~~~~~~~~~~t~L~V~~~~~~~~~P-~v~~~~~-~~~l~C~~~g~~P~~~~v~W~~~-~~l 159 (207)
T 1ypz_E 83 SGTYFCAADTWHISEGYELGTDKLVFGQGTQVTVEPKSQPPAKP-SVFIMKN-GTNVACLVKDFYPKEVTISLRSS-KKI 159 (207)
T ss_dssp CEEEEEEEECBCCCTTCCCCCCCCEECCCEEEEEECCCCCCCCC-EEEEEEE-TTEEEEEEEEESSSCCEEEEECS-SEE
T ss_pred CEEEEEEEecCCcccccccccceeeecCccEEEEccCCCCCCCC-eEEEeCC-CCeEEEEEeeEeCCCeEEEEecC-Ccc
Confidence 9999999998742 11 124578887533222222 2223222 37999999874 54 79999999 777
Q ss_pred ecCCceEEEEeCCeEEEEEcccCccCceeEEEEEEcCCcce
Q psy7042 225 QSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV 265 (2245)
Q Consensus 225 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 265 (2245)
...........++...+. .....+|.|.|+|.|.|..+..
T Consensus 160 ~~~~~~~~~~~~g~y~~~-~~~~~~~~~~ytC~v~~~~~~~ 199 (207)
T 1ypz_E 160 VEFDPAIVISPSGKYSAV-KLGQYGDSNSVTCSVQHNSETV 199 (207)
T ss_dssp EECCCEEEECTTSSEEEE-ECEEESSTTTCEEEEEETTEEE
T ss_pred cCCccceEEcCCCcEEEE-EeecccCCCcEEEEEEECCccE
Confidence 544221111222322222 2233367899999999987643
No 445
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.44 E-value=5.8e-13 Score=153.93 Aligned_cols=172 Identities=14% Similarity=0.186 Sum_probs=118.5
Q ss_pred ceeccCCceEEcCCCeEEEEEEecCcCCCeEEEeeC--------------CEecc---CCceEEEEe-cCcEEEEEEeee
Q psy7042 1699 DFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRN--------------GREIS---SGARYRVET-AGGVFRLHFNEV 1760 (2245)
Q Consensus 1699 ~~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~--------------~~~l~---~~~~~~~~~-~~~~~~L~i~~v 1760 (2245)
.+...+..+.+.+|++++|.|.+.+ +.+.+.|+|. +.... ...|+.+.. ..+..+|.|.++
T Consensus 4 ~v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v 82 (240)
T 3q5y_A 4 GVVQSPRHIIKEKGGRSVLTCIPIS-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSAL 82 (240)
T ss_dssp CCEEECSEEEEETTCCEEEEEECCT-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECSC
T ss_pred ccccCcceeeecCCCcEEEEEEeCC-CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECcC
Confidence 3455667789999999999999976 6779999982 21111 124666554 345778999999
Q ss_pred ccCCCeEEEEEEecC---ceeeEEEEEEEec------CCCccc-cCCCceEEcCCCeEEEEEEEec-cCCc-EEEEEECC
Q psy7042 1761 TDVDNGDYTCEAYNS---VGFAHTSSRVKIG------TPPRID-RMPNALYIPEGDNTKVKIFYAG-DQPM-EVSLTKNG 1828 (2245)
Q Consensus 1761 ~~~d~G~Y~C~~~n~---~g~~~~~~~l~V~------~~p~~~-~~~~~~~~~~g~~~~l~C~~~~-~p~~-~v~W~~~g 1828 (2245)
+.+|+|.|.|.+.+. .........|.|. .+|.+. ..+....+.+|+.++|.|.+.| .|.+ .+.|+++|
T Consensus 83 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g 162 (240)
T 3q5y_A 83 ELEDSAMYFCASSLRWGDEQYFGPGTRLTVLEDLRNVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVNG 162 (240)
T ss_dssp CGGGCEEEEEEEESSTTBCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETT
T ss_pred ChhHCEEEEEEEccCCCcceEEcCCEEEEEeccccCCCCCeeEEeCCchhhcccCCceEEEEEEeeEECCCeEEEEEECC
Confidence 999999999999732 1222233456664 345443 2334445567899999999998 5655 89999999
Q ss_pred EEeecCCceE---EEEcCCe----EEEEEcccCccc-ceEEEEEEEcCCee
Q psy7042 1829 RVVQSDDRFK---FTVLDDY----IIIFIKEIRKED-AGDYTVNLSNSSGS 1871 (2245)
Q Consensus 1829 ~~l~~~~~~~---~~~~~~~----~~l~i~~~~~~d-~G~Y~C~a~n~~g~ 1871 (2245)
+.+....... ....++. ..|.|.....+| .|.|+|.|.|....
T Consensus 163 ~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~~~ 213 (240)
T 3q5y_A 163 KEVHSGVSTDPQAYKESNYSYSLSSRLRVSATFWHNPRNHFRCQVQFHGLS 213 (240)
T ss_dssp EEECTTEEECSSCEEEETTEEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred EECcCcEecCCceeeCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCC
Confidence 9886532211 1111222 248899988888 66999999987653
No 446
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.44 E-value=1.5e-13 Score=155.67 Aligned_cols=175 Identities=14% Similarity=0.195 Sum_probs=114.1
Q ss_pred CCceEEcCCCeEEEEEEecCc--CCCeEEEeeCC--Ee---c-------------cCCceEEEEecCcEEEEEEeeeccC
Q psy7042 1704 LKDLVVPLGKLLTLQCEATGT--PVPKCRWLRNG--RE---I-------------SSGARYRVETAGGVFRLHFNEVTDV 1763 (2245)
Q Consensus 1704 ~~~~~~~~G~~v~L~C~~~~~--p~~~v~W~~~~--~~---l-------------~~~~~~~~~~~~~~~~L~i~~v~~~ 1763 (2245)
+..+.+.+|++++|.|.+.+. +.+.+.|+|.. .. + ....|+.+...++..+|.|.+++.+
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 85 (215)
T 3nl4_H 6 SGGRLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSPTTE 85 (215)
T ss_dssp ECCCEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSCCGG
T ss_pred CCCEEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCCCcc
Confidence 455789999999999999763 36689998732 11 1 1235677766778889999999999
Q ss_pred CCeEEEEEEecCcee----eEEEEEEEec----CCCccccCCCceEEcCCCeEEEEEEEeccCC--cEEEEEECCEEeec
Q psy7042 1764 DNGDYTCEAYNSVGF----AHTSSRVKIG----TPPRIDRMPNALYIPEGDNTKVKIFYAGDQP--MEVSLTKNGRVVQS 1833 (2245)
Q Consensus 1764 d~G~Y~C~~~n~~g~----~~~~~~l~V~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~--~~v~W~~~g~~l~~ 1833 (2245)
|+|.|.|.+.+..+. ......|.|. .+|.+...+....+.+|+.++|.|.+.+.++ ..+.|+++|..+..
T Consensus 86 D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~~~~ 165 (215)
T 3nl4_H 86 DTATYFCVRKYGSEWGGDLWGPGTLVTVSSGQPKAPSVFPLAPCCGDTPSSTVTLGCLVKGYLPEPVTVTWNSGTLTNGV 165 (215)
T ss_dssp GCEEEEEEEECSSSSCEEEECCCEEEEECSSCCBCCEEEEECCCTTCCC--CEEEEEEEEEEBSSCCEEEEGGGTBCTTE
T ss_pred cCEEEEEEEecCCCccceEEcCCEEEEEeCCCcCCCEEEEecCCccccCCCcEEEEEEEeeeeCCCeEEEEeeCCEECCe
Confidence 999999999987542 2233567775 4566553333345667999999999998643 46889999874422
Q ss_pred CCceEEEEcCC-eEEEEEcccCcccceEEEEEEEcCCeeeEEEEEEE
Q psy7042 1834 DDRFKFTVLDD-YIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTIN 1879 (2245)
Q Consensus 1834 ~~~~~~~~~~~-~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 1879 (2245)
.........++ ........+...| |.|+|.|.|..|.......+.
T Consensus 166 ~~~~~~~~~~g~~~~~s~l~v~~~d-g~ytC~v~~~~~~~~~~~~l~ 211 (215)
T 3nl4_H 166 RTFPSVRQSSGLYSLSSVVSVTSSS-QPVTCNVAHPATNTKVDKTVA 211 (215)
T ss_dssp EECCCEECTTSCEEEEEEEEECC----CCEEEEEEGGGTEEEEEECC
T ss_pred EecCceECCCCCEEEEEEEEEeccC-CEEEEEEEeCCCCcceEEecC
Confidence 11111111112 1121224466667 999999999998776665554
No 447
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.44 E-value=2.9e-13 Score=132.60 Aligned_cols=97 Identities=27% Similarity=0.491 Sum_probs=89.6
Q ss_pred CCCCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECCeeccCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEEc
Q psy7042 88 GEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYN 167 (2245)
Q Consensus 88 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 167 (2245)
..+|.|...+..+.+.+|+.++|.|.+.|.|.+.|.|+|+|..+..+.++.+..+++..+|.|.+++.+|+|.|+|.|.|
T Consensus 11 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n 90 (107)
T 3irg_B 11 GSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARN 90 (107)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCCeeEcCCccEEEeCCCeEEEEEEEeecCCCEEEEEECCeECCCCCcEEEEeCCCEEEEEEccCCHHhCEEEEEEEEc
Confidence 46899999999999999999999999999999999999999999988899888888888899999999999999999999
Q ss_pred CcccceeEEEEEecCCC
Q psy7042 168 SVGFAHTSSRVKIGTPP 184 (2245)
Q Consensus 168 ~~g~~~~~~~l~V~~~P 184 (2245)
..|....++.|.|..+|
T Consensus 91 ~~g~~~~~~~l~V~~~P 107 (107)
T 3irg_B 91 AAGEAYAAAAVTVLEPP 107 (107)
T ss_dssp TTEEEEEEEEEEEEC--
T ss_pred CCCcEEEEEEEEEEcCC
Confidence 99999999999998876
No 448
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.44 E-value=2.9e-13 Score=157.21 Aligned_cols=173 Identities=17% Similarity=0.233 Sum_probs=118.3
Q ss_pred CceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECC--ee---c------------cCCCeEEEEEc-CcEEEEEEee
Q psy7042 91 PDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNG--RE---I------------SSGARYRVETA-GGVFRLHFNE 152 (2245)
Q Consensus 91 P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g--~~---l------------~~~~~~~~~~~-~~~~~L~i~~ 152 (2245)
+.++..|..+.+.+|++++|.|.+. .+.+.|.|+|+. .. + ....|+.+..+ ++...|.|.+
T Consensus 4 ~~v~q~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~ 82 (252)
T 1oga_E 4 GGITQSPKYLFRKEGQNVTLSCEQN-LNHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTVTS 82 (252)
T ss_dssp -CEECSCSEEEEETTCCEEECCEEC-SCCSEEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSSTTBCCEEECS
T ss_pred ccceEcCCeEEEcCCCcEEEEEEeC-CCCCEEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEecCCCEEEEEECc
Confidence 4566778889999999999999995 457889999853 11 1 01346666532 3345799999
Q ss_pred eccCCCeEEEEEEEcCc---ccceeEEEEEec------CCCeeecC-CCceEEcCCCeEEEEEEEecC-CC-ceEEEeeC
Q psy7042 153 VTDVDNGDYTCEAYNSV---GFAHTSSRVKIG------TPPRIDRM-PNALYIPEGDNTKVKIFYAGD-QP-MEVSLTKN 220 (2245)
Q Consensus 153 ~~~~d~G~Y~C~a~n~~---g~~~~~~~l~V~------~~P~~~~~-~~~~~v~~G~~~~l~C~~~g~-p~-~~i~W~~~ 220 (2245)
++.+|+|.|.|.+.+.. ......+.|.|. .+|.+... |....+.+|+.++|.|.+.|. |. +.|+|+||
T Consensus 83 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~ 162 (252)
T 1oga_E 83 AQKNPTAFYLCASSSRSSYEQYFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVN 162 (252)
T ss_dssp CCSCCCEEEEEEEESSTTSCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEET
T ss_pred CChhhCEEEEEEEecCCccceeECCCEEEEEecccCCCCCCeEEEECCChhhhccCCceEEEEEEeeEcCCCcEEEEEEC
Confidence 99999999999999862 111123456665 36666543 454556689999999999884 65 59999999
Q ss_pred ceeeecCCceE---EE----EeCC----eEEEEEcccCcc-CceeEEEEEEcCCcc
Q psy7042 221 GRVVQSDDRFK---FT----VLDD----YIIIFIKEIRKE-DAGDYTVNLSNSSGS 264 (2245)
Q Consensus 221 g~~l~~~~~~~---~~----~~~~----~~~L~i~~~~~~-d~G~Y~C~a~n~~g~ 264 (2245)
|..+..+.... .. ..+. .+.|.|...... |.|.|+|.|.|....
T Consensus 163 g~~l~~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l~ 218 (252)
T 1oga_E 163 GKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLS 218 (252)
T ss_dssp TEEECSSEEECSSCEESCTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBC
T ss_pred CEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCC
Confidence 99886542211 00 0111 134777766553 678999999997644
No 449
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.44 E-value=8.5e-13 Score=152.15 Aligned_cols=179 Identities=12% Similarity=0.186 Sum_probs=120.8
Q ss_pred eeccCCceEEcCCCeEEEEEEecCc--CCCeEEEeeCC--Ee---cc--------------CCceEEEEecC--cEEEEE
Q psy7042 1700 FIVPLKDLVVPLGKLLTLQCEATGT--PVPKCRWLRNG--RE---IS--------------SGARYRVETAG--GVFRLH 1756 (2245)
Q Consensus 1700 ~~~~~~~~~~~~G~~v~L~C~~~~~--p~~~v~W~~~~--~~---l~--------------~~~~~~~~~~~--~~~~L~ 1756 (2245)
+...+..+.+.+|++++|.|.+.+. +.+.+.|+|+. .. +. ...|+.+..+. +..+|.
T Consensus 4 v~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 83 (242)
T 1hxm_B 4 LEQPQISSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTLT 83 (242)
T ss_dssp EECCCSEEEEETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEEEE
T ss_pred cCcCCceEEecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEEEE
Confidence 4455677889999999999999775 56789999842 21 10 23566665433 578899
Q ss_pred EeeeccCCCeEEEEEEecCce-----e--eEEEEEEEecC-------CCcccc-CCCceEEcCCCeEEEEEEEecc-CC-
Q psy7042 1757 FNEVTDVDNGDYTCEAYNSVG-----F--AHTSSRVKIGT-------PPRIDR-MPNALYIPEGDNTKVKIFYAGD-QP- 1819 (2245)
Q Consensus 1757 i~~v~~~d~G~Y~C~~~n~~g-----~--~~~~~~l~V~~-------~p~~~~-~~~~~~~~~g~~~~l~C~~~~~-p~- 1819 (2245)
|.+++.+|+|.|.|.+.+... . ......|.|.. +|.... .+....+.+|+.++|.|.+.|. |.
T Consensus 84 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~p~~~v~~p~~~~~~~g~~v~L~C~~~g~~P~~ 163 (242)
T 1hxm_B 84 IHNVEKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPDV 163 (242)
T ss_dssp ECSCCGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSCCSCBCCCCCCCGGGGGSSSCEEEEEEEEEESSCC
T ss_pred ECCCCcccCEEEEEeeecCCccccccceeEcCcEEEEEcccccCCCcCCCceEECCChhhcccCCCceEEEEEeeEECCC
Confidence 999999999999999987531 1 11235777765 233322 2333456679999999999986 64
Q ss_pred cEEEEEECCE-EeecCCceEEEEcCC----eEEEEEcccCcccceEEEEEEEcCCeeeEEEEEEEE
Q psy7042 1820 MEVSLTKNGR-VVQSDDRFKFTVLDD----YIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINI 1880 (2245)
Q Consensus 1820 ~~v~W~~~g~-~l~~~~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v 1880 (2245)
+.+.|+++|. .+...........++ ...|.|..... + |.|+|.|.|..+.......+.+
T Consensus 164 ~~v~W~~~~~~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-g~y~C~v~n~~~~~~~~~~~~~ 227 (242)
T 1hxm_B 164 IKIHWEEKKSNTILGSQEGNTMKTNDTYMKFSWLTVPEKSL-D-KEHRCIVRHENNKNGVDQEIIF 227 (242)
T ss_dssp EEEEEEESSSCCCCCCEECCCEECSSSEEEEEEEEECTGGG-G-SCEEEEEEETTSGGGSCEEEEE
T ss_pred eEEEEEcCCCEeecCccccceecCCCcEEEEEEEEEccccC-C-CEEEEEEEeCCCCCCceeEeec
Confidence 7999999987 553221000011111 14688887765 4 9999999999886655555544
No 450
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.43 E-value=8.3e-13 Score=126.26 Aligned_cols=91 Identities=22% Similarity=0.396 Sum_probs=82.8
Q ss_pred eEEeeccceeeecCccEEEEEEEEee-CCCeEEEeeCCEeeCCCCcEEEEEeCcEEEEEEcCCCCCCCeEEEEEEEeCCc
Q psy7042 2089 EIIVPLRNANAIQNHNAQFQCTITGC-PKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGG 2167 (2245)
Q Consensus 2089 ~~~~~~~~~~~~~g~~v~l~C~~~g~-P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G 2167 (2245)
.+...+.+..+.+|+.++|.|.+.|. |.|.|.|+|++..+....++.+...++...|.|.++..+|+|.|+|.|.|..|
T Consensus 3 ~v~~~~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g 82 (97)
T 2bk8_A 3 MVSGQIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENSEKYEITYEDGVAILYVKDITKLDDGTYRCKVVNDYG 82 (97)
T ss_dssp CEECCCCCEEECTTCCEEEEEEEESCCTTCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSC
T ss_pred ceeccCcCEEEcCCCcEEEEEEEeccCCCCEEEEEECCEECcCCCCEEEEEcCCeEEEEEecCChhhCeEEEEEEECCCC
Confidence 34556677889999999999999997 99999999999999998899888788888999999999999999999999999
Q ss_pred eeeEEEEEEEEc
Q psy7042 2168 VKSTKAELIIMT 2179 (2245)
Q Consensus 2168 ~~~~~~~l~V~~ 2179 (2245)
..+..+.|.|.+
T Consensus 83 ~~~~~~~l~V~~ 94 (97)
T 2bk8_A 83 EDSSYAELFVKG 94 (97)
T ss_dssp EEEEEEEEEETT
T ss_pred eEeEEEEEEEEe
Confidence 999999998854
No 451
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.43 E-value=2.9e-13 Score=130.46 Aligned_cols=95 Identities=29% Similarity=0.415 Sum_probs=83.7
Q ss_pred cCCCceEEeeccceeeecCccEEEEEEEEeeCCCeEEEeeCCEeeCC-CCcEEEEEeCcEEEEEEcCCCCCCCeEEEEEE
Q psy7042 2084 AAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITP-SARHHIFAEGDTYTLIINSVYGVDADEYVCRA 2162 (2245)
Q Consensus 2084 ~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~-~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 2162 (2245)
...+|.|...+.+..+.+|+.++|.|.+.|.|.|.|.|+|+|..+.. ..++.+..++ .|.|.++..+|+|.|+|.|
T Consensus 5 ~~~~P~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~---~L~i~~v~~~d~G~Y~C~a 81 (100)
T 2edj_A 5 SSGPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQEQG---TLQIKNLRISDTGTYTCVA 81 (100)
T ss_dssp CCSSCEEEECCCCEEEESSSEEEECCEEECSSCCEEEEEESSSEESSSCSSCEECTTC---CEEEESCCTTTCCEEEEEE
T ss_pred CCCCCEEEeCcCCEEEcCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCCEEEcCCC---EEEEccCCcccCEEEEEEE
Confidence 45679999999999999999999999999999999999999998873 4455555455 6999999999999999999
Q ss_pred EeCCceeeEEEEEEEEcCC
Q psy7042 2163 VNKGGVKSTKAELIIMTAP 2181 (2245)
Q Consensus 2163 ~N~~G~~~~~~~l~V~~~p 2181 (2245)
.|..|..+..+.|.|.++|
T Consensus 82 ~n~~g~~~~~~~l~V~~~~ 100 (100)
T 2edj_A 82 TSSSGETSWSAVLDVTESG 100 (100)
T ss_dssp ECSSCCCBCCEEEEEESCC
T ss_pred EcCCCCEEEEEEEEEecCC
Confidence 9999999999999998754
No 452
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.43 E-value=7.2e-13 Score=156.12 Aligned_cols=174 Identities=17% Similarity=0.227 Sum_probs=119.5
Q ss_pred CCceeccCCceEEcCCCeEEEEEEecCcCCCeEEEee--CCEec------------cC----CceEEEEe-cCcEEEEEE
Q psy7042 1697 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLR--NGREI------------SS----GARYRVET-AGGVFRLHF 1757 (2245)
Q Consensus 1697 ~p~~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~--~~~~l------------~~----~~~~~~~~-~~~~~~L~i 1757 (2245)
.+.+...+..+.+.+|++++|.|.+. .+.+.+.|+| .+..+ .. ..|+.+.. ..+..+|.|
T Consensus 26 ~~~v~~~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I 104 (268)
T 3pl6_D 26 GAGVSQTPSNKVTEKGKYVELRCDPI-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKI 104 (268)
T ss_dssp -SSCBCCCSEEEEETTCCEEEEEBCB-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEE
T ss_pred CceeEeCCCEEEecCCCCEEEEEEeC-CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEE
Confidence 44566667778999999999999986 4677899998 22211 11 15666654 345678999
Q ss_pred eeeccCCCeEEEEEEecC--ceeeEEEEEEEecC------CCccc-cCCCceEEcCCCeEEEEEEEeccCCc--EEEEEE
Q psy7042 1758 NEVTDVDNGDYTCEAYNS--VGFAHTSSRVKIGT------PPRID-RMPNALYIPEGDNTKVKIFYAGDQPM--EVSLTK 1826 (2245)
Q Consensus 1758 ~~v~~~d~G~Y~C~~~n~--~g~~~~~~~l~V~~------~p~~~-~~~~~~~~~~g~~~~l~C~~~~~p~~--~v~W~~ 1826 (2245)
.+++.+|+|.|+|.+.+. .+.......|.|.. +|.+. ..+....+.+|+.++|.|.+.|.+++ .++|++
T Consensus 105 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~~ 184 (268)
T 3pl6_D 105 QRTERGDSAVYLCATSALGDTQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWV 184 (268)
T ss_dssp CSCCGGGCEEEEEEEESSSSSCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE
T ss_pred CCCCcccCEEEEEEEecCCCceeeCCcEEEEEecCcccccCCceEEeCCCcccccCCCceEEEEEECcccCCCeEEEEEE
Confidence 999999999999999973 33333345666654 45443 23444455669999999999996544 899999
Q ss_pred CCEEeecCCceEE---E----EcCC----eEEEEEcccCccc-ceEEEEEEEcCCee
Q psy7042 1827 NGRVVQSDDRFKF---T----VLDD----YIIIFIKEIRKED-AGDYTVNLSNSSGS 1871 (2245)
Q Consensus 1827 ~g~~l~~~~~~~~---~----~~~~----~~~l~i~~~~~~d-~G~Y~C~a~n~~g~ 1871 (2245)
+|+.+........ . ..++ ...|.|.....+| .|.|+|.|.|....
T Consensus 185 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~l~ 241 (268)
T 3pl6_D 185 NGKEVHSGVCTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLS 241 (268)
T ss_dssp SSSEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred CCEECCCCeEeccccccccccCCCCcEEEEEEEEEcHHHhccCCCEEEEEEEcCCCC
Confidence 9998854311100 0 0011 1357788777777 99999999987654
No 453
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.43 E-value=1.6e-13 Score=127.01 Aligned_cols=86 Identities=20% Similarity=0.361 Sum_probs=73.6
Q ss_pred CceEEeeccce--eeecCccEEEEEEEEeeCCCeEEEeeCCEeeCCCCcEEEEEeCcEEEEEEcCCCCCCCeEEEEEEEe
Q psy7042 2087 APEIIVPLRNA--NAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVN 2164 (2245)
Q Consensus 2087 ~p~~~~~~~~~--~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N 2164 (2245)
||.|..++.+. .+.+|+.++|.|.+.| |.|.|+|+|||++|..+.++.+..++..+.|.|.++..+|+|.|+|.|.|
T Consensus 4 P~~i~~p~~~~~v~~~~g~~v~l~C~v~~-p~~~v~W~k~g~~i~~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 82 (91)
T 2lvc_A 4 PVHIVDPREHVFVHAITSECVMLACEVDR-EDAPVRWYKDGQEVEESDFVVLENEGPHRRLVLPATQPSDGGEFQCVAGD 82 (91)
T ss_dssp CCCCCBCCSCEEEECCTTCCEEEEEECSC-TTSCCEEEETTSCCCCCSSCEEEEETTEEEEEESSCCGGGCSEEEEECSS
T ss_pred CcEEeccCCCeEEEEECCCcEEEEEEECC-CCcEEEEEECCEEeeeeeeeeEEecCCeEEEEeCCCChhhcEEEEEEEcc
Confidence 56666665554 4568999999999966 99999999999999999999999999999999999999999999999877
Q ss_pred CCceeeEEEEEEE
Q psy7042 2165 KGGVKSTKAELII 2177 (2245)
Q Consensus 2165 ~~G~~~~~~~l~V 2177 (2245)
. +.++.|+|
T Consensus 83 ~----~~~~~ltV 91 (91)
T 2lvc_A 83 E----CAYFTVTI 91 (91)
T ss_dssp C----EEEEEEEC
T ss_pred e----EEEEEEEC
Confidence 5 66677654
No 454
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.42 E-value=1e-12 Score=152.60 Aligned_cols=173 Identities=18% Similarity=0.258 Sum_probs=119.6
Q ss_pred CceeccCCceEEcCCCeEEEEEEecCcCCCeEEEee--------------CCEeccC----CceEEEEec-CcEEEEEEe
Q psy7042 1698 PDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLR--------------NGREISS----GARYRVETA-GGVFRLHFN 1758 (2245)
Q Consensus 1698 p~~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~--------------~~~~l~~----~~~~~~~~~-~~~~~L~i~ 1758 (2245)
+.++..+..+.+.+|++++|.| ..+.+.+.+.|+| ++..+.. ..|+.+... .+..+|.|.
T Consensus 3 ~~v~~~p~~v~v~~G~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~ 81 (245)
T 4ei6_B 3 PKVLQIPSHQIIDMGQMVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQ 81 (245)
T ss_dssp CCCEEECSEEEEETTCCEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEEC
T ss_pred cceEeCCceEEecCCCCEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEEC
Confidence 3456667778999999999999 6677888999998 2222211 156666543 456789999
Q ss_pred eeccCCCeEEEEEEecC----ceeeEEEEEEEec------CCCccc-cCCCceEEcCCCeEEEEEEEecc-CCc-EEEEE
Q psy7042 1759 EVTDVDNGDYTCEAYNS----VGFAHTSSRVKIG------TPPRID-RMPNALYIPEGDNTKVKIFYAGD-QPM-EVSLT 1825 (2245)
Q Consensus 1759 ~v~~~d~G~Y~C~~~n~----~g~~~~~~~l~V~------~~p~~~-~~~~~~~~~~g~~~~l~C~~~~~-p~~-~v~W~ 1825 (2245)
+++.+|+|.|.|.+.+. .+.......|.|. .+|.+. ..+....+.+|+.++|.|.+.|. |.+ .+.|+
T Consensus 82 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~ 161 (245)
T 4ei6_B 82 PTALEDSAVYFCASSFWGAYAEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWW 161 (245)
T ss_dssp SCCGGGCEEEEEEEECSSTTCCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEE
T ss_pred CCCHhHCEEEEEEEccCCCcceEEEcCCcEEEEecccCCCCCceEEEeCCCcccccCCCceEEEEEEeeEeCCCeEEEEE
Confidence 99999999999999853 2223334566665 345443 33444455669999999999984 544 89999
Q ss_pred ECCEEeecCCceEEEE-------cCC----eEEEEEcccCccc-ceEEEEEEEcCCee
Q psy7042 1826 KNGRVVQSDDRFKFTV-------LDD----YIIIFIKEIRKED-AGDYTVNLSNSSGS 1871 (2245)
Q Consensus 1826 ~~g~~l~~~~~~~~~~-------~~~----~~~l~i~~~~~~d-~G~Y~C~a~n~~g~ 1871 (2245)
++|+.+.......... .++ ...|.|.....+| .|.|+|.|.|....
T Consensus 162 ~~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~ytC~v~~~~l~ 219 (245)
T 4ei6_B 162 VNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLS 219 (245)
T ss_dssp ETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred ECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEECCCC
Confidence 9999886532111000 011 1348888888888 89999999987543
No 455
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.42 E-value=7.5e-13 Score=127.90 Aligned_cols=93 Identities=28% Similarity=0.382 Sum_probs=84.6
Q ss_pred CCceEEeeccceeeecCccEEEEEEEEeeCCCeEEEeeCCEeeC--CCCcEEEEEeCcEEEEEEcCCCCCCCeEEEEEEE
Q psy7042 2086 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREIT--PSARHHIFAEGDTYTLIINSVYGVDADEYVCRAV 2163 (2245)
Q Consensus 2086 ~~p~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~--~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 2163 (2245)
.||.|...+....+.+|+.++|.|.+.|.|.|.|.|+|+|..+. ...++.+..++....|.|.++..+|+|.|+|.|.
T Consensus 4 ~pP~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 83 (100)
T 3irg_A 4 IPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLG 83 (100)
T ss_dssp EEEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCeeecCCCcEEEcCCCcEEEEEEEEEcCCCceEEEECCEEeecCCCCEEEEEecCCEEEEEEeecCcccCEEEEEEEE
Confidence 46888888888899999999999999999999999999999987 3457888888777899999999999999999999
Q ss_pred eCCceeeEEEEEEEE
Q psy7042 2164 NKGGVKSTKAELIIM 2178 (2245)
Q Consensus 2164 N~~G~~~~~~~l~V~ 2178 (2245)
|..|..+..+.|.|.
T Consensus 84 n~~g~~~~~~~l~V~ 98 (100)
T 3irg_A 84 NEFGSDSATVNIHIR 98 (100)
T ss_dssp ETTEEEEEEEEEEEE
T ss_pred eCCCcEEEEEEEEEE
Confidence 999999999999885
No 456
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.42 E-value=3.9e-13 Score=122.16 Aligned_cols=83 Identities=25% Similarity=0.433 Sum_probs=74.2
Q ss_pred CCcceEEeCCCeEEEEEEEeeecCCceEEEECCeeccCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEEcCcccceeE
Q psy7042 96 PLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTS 175 (2245)
Q Consensus 96 ~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 175 (2245)
.+.++.+.+|+.++|.|.+.+ |.|.|.|+|||..|..+.++.+..+++..+|.|.+++.+|+|.|+|.|.| ++.+
T Consensus 2 ~lt~v~~~~G~~v~l~C~vs~-p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n----~~~~ 76 (84)
T 2lu7_A 2 HMTRVRSTPGGDLELVVHLSG-PGGPVRWYKDGERLASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDAPQ----DSRI 76 (84)
T ss_dssp -CCCEEECTTSCEEEECCCSC-CSTTCEEEETTEECCCCSSEEEEECSSCEEEEESSCSSTTCEEEEEECTT----TCEE
T ss_pred CCeEEEEecCCCEEEEEEECC-CCcEEEEEECCEEccccccEEEeecCCeEEEEecCCCCcccEEEEEEECC----EEEE
Confidence 356788999999999999976 88999999999999999999999999888999999999999999999854 5678
Q ss_pred EEEEecCC
Q psy7042 176 SRVKIGTP 183 (2245)
Q Consensus 176 ~~l~V~~~ 183 (2245)
+.|+|..|
T Consensus 77 a~l~V~eP 84 (84)
T 2lu7_A 77 FLVSVEEP 84 (84)
T ss_dssp EEEEECCC
T ss_pred EEEEEECC
Confidence 88998765
No 457
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.42 E-value=9.8e-13 Score=152.57 Aligned_cols=174 Identities=21% Similarity=0.264 Sum_probs=118.1
Q ss_pred eeccCCceEEcCCCeEEEEEEecCcCCCeEEEeeC--CEec--------------cCCceEEEEe-cCcEEEEEEeeecc
Q psy7042 1700 FIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRN--GREI--------------SSGARYRVET-AGGVFRLHFNEVTD 1762 (2245)
Q Consensus 1700 ~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~--~~~l--------------~~~~~~~~~~-~~~~~~L~i~~v~~ 1762 (2245)
+...+..+.+.+|++++|.|.+.+.+.+.+.|+|. +..+ ....|+.+.. ..+..+|.|.+++.
T Consensus 4 v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~ 83 (245)
T 3nfj_J 4 IHQWPATLVQPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLL 83 (245)
T ss_dssp EEEECSEEEEETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCG
T ss_pred eeCCCceEEecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCCh
Confidence 34456678899999999999999989999999982 2110 1123454443 35677899999999
Q ss_pred CCCeEEEEEEecCce------eeEEEEEEEecC------CCcccc-CCCceEEcCCCeEEEEEEEecc-CCc-EEEEEEC
Q psy7042 1763 VDNGDYTCEAYNSVG------FAHTSSRVKIGT------PPRIDR-MPNALYIPEGDNTKVKIFYAGD-QPM-EVSLTKN 1827 (2245)
Q Consensus 1763 ~d~G~Y~C~~~n~~g------~~~~~~~l~V~~------~p~~~~-~~~~~~~~~g~~~~l~C~~~~~-p~~-~v~W~~~ 1827 (2245)
+|+|.|.|.+.+..| .......|.|.. +|.+.. .+....+.+|+.+.|.|.+.|. |++ .+.|+++
T Consensus 84 ~D~G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~ 163 (245)
T 3nfj_J 84 SDSGFYLCAWSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSWWVN 163 (245)
T ss_dssp GGCEEEEEEEECCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEET
T ss_pred hhCEEEEEEEeeccCCCceeEEECCCeEEEEEcccCCCCCCceEeecCCcccccCCCceEEEEEEccCcCCCEEEEEEEC
Confidence 999999999998322 222334666654 454432 2233334559999999999995 444 7999999
Q ss_pred CEEeecCCceEEEE-------cCC----eEEEEEcccCccc-ceEEEEEEEcCCeeeE
Q psy7042 1828 GRVVQSDDRFKFTV-------LDD----YIIIFIKEIRKED-AGDYTVNLSNSSGSVS 1873 (2245)
Q Consensus 1828 g~~l~~~~~~~~~~-------~~~----~~~l~i~~~~~~d-~G~Y~C~a~n~~g~~~ 1873 (2245)
|+.+.......... .++ ...|.|.....+| .|.|+|.|.|......
T Consensus 164 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~~YtC~v~~~~~~~~ 221 (245)
T 3nfj_J 164 GKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 221 (245)
T ss_dssp TEEECTTEEECSSCEESSSSSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCSS
T ss_pred CEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEECCCCCc
Confidence 99885432110000 011 1468888888777 6699999998865443
No 458
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.42 E-value=2.6e-13 Score=131.59 Aligned_cols=95 Identities=27% Similarity=0.461 Sum_probs=87.8
Q ss_pred cCCCceEEeeccceeeecCccEEEEEEEEeeCCCeEEEeeCCEeeCCCCcEEEEEeCcEEEEEEcCCCCCCCeEEEEEEE
Q psy7042 2084 AAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAV 2163 (2245)
Q Consensus 2084 ~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 2163 (2245)
...+|.|...+.+..+.+|+.++|.|.+.|.|.|.|.|+|+|..+....++.+..++....|.|.++..+|+|.|+|.|.
T Consensus 11 ~~~~~~i~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 90 (106)
T 1nct_A 11 TTLAARILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFEISSVQASDEGNYSVVVE 90 (106)
T ss_dssp SSCCCEEEECCCCEEESSSSCEECCEEEECSSCCBCCBCSSSSCCTTCSSEEEEECSSEEEEEECCCCSSCCSEEEECCB
T ss_pred CCCCCEEEECCCCEEEeCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCEEEEEECcCCchhCEEEEEEEE
Confidence 34468899999999999999999999999999999999999999998889988887777899999999999999999999
Q ss_pred eCCceeeEEEEEEEE
Q psy7042 2164 NKGGVKSTKAELIIM 2178 (2245)
Q Consensus 2164 N~~G~~~~~~~l~V~ 2178 (2245)
|..|..+.++.|.|.
T Consensus 91 N~~G~~~~~~~l~V~ 105 (106)
T 1nct_A 91 NSEGKQEAEFTLTIQ 105 (106)
T ss_dssp CSSCBCCEEEEEEEC
T ss_pred eCCCeEEEEEEEEEE
Confidence 999999999999884
No 459
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=99.41 E-value=3.2e-14 Score=160.31 Aligned_cols=171 Identities=11% Similarity=0.083 Sum_probs=113.9
Q ss_pred CCce-ecCCcceEEeCCCeEEEEEEEeeecC---CceEEEECCeeccCCCeEE-E-EEcC---cEEEEEEeeeccCCCeE
Q psy7042 90 KPDF-IVPLKDLVVPLGKLLTLQCEATGTPV---PKCRWLRNGREISSGARYR-V-ETAG---GVFRLHFNEVTDVDNGD 160 (2245)
Q Consensus 90 ~P~~-~~~~~~~~v~~G~~v~L~C~~~g~p~---~~i~W~~~g~~l~~~~~~~-~-~~~~---~~~~L~i~~~~~~d~G~ 160 (2245)
+|.+ +..|....+.+|+.++|.|.+.|.++ +.|.| ++..+....... . ...+ ....|.|.+++.+|+|.
T Consensus 3 ~p~v~~~~P~~~~v~~G~~v~L~C~~~g~~p~~~~~v~W--~~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~g~ 80 (214)
T 1ow0_A 3 HPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW--TPSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKT 80 (214)
T ss_dssp CCCCEEECCCHHHHHHCSSCCCEEEETTCCSCCCCCCCB--SSCSSCCCEECCCCCCSTTCCCEEEECTTTHHHHHHTCE
T ss_pred CCEEEEECcChHHhccCCCcEEEEEEeeeECCCCeEEEE--cCCCCCCcccCCceECCCCcEEEEEEEEEeHHHcCCCCe
Confidence 3444 45677778899999999999998754 68999 444433210000 0 0011 23468999999999999
Q ss_pred EEEEEEcCcccceeEEEEE---ecCCCeeecCC-CceEEcCCCeEEEEEEEecC-CC-ceEEEeeCceeeecCCceE---
Q psy7042 161 YTCEAYNSVGFAHTSSRVK---IGTPPRIDRMP-NALYIPEGDNTKVKIFYAGD-QP-MEVSLTKNGRVVQSDDRFK--- 231 (2245)
Q Consensus 161 Y~C~a~n~~g~~~~~~~l~---V~~~P~~~~~~-~~~~v~~G~~~~l~C~~~g~-p~-~~i~W~~~g~~l~~~~~~~--- 231 (2245)
|+|.|.|..+.......|. +..+|.+...+ ....+.+|+.++|.|.+.|. |+ +.|+|+|||..+.......
T Consensus 81 Y~C~~~~~~~~~~~~~~i~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~ 160 (214)
T 1ow0_A 81 FTCTAAYPESKTPLTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYLTWAS 160 (214)
T ss_dssp EEEEECCSSCSSCEEEEEECCSSCCCCEEEEECCCTTTTTSSSEEEEEEEEEEESSSCCEEEEEETTEECCGGGSEECCC
T ss_pred EEEEEecCCCCCceeEeeccCCCCCCCEEEecCCCHHHhccCCceEEEEEEeeeECCCcEEEEEECCEECCCCceeecCC
Confidence 9999999877544444443 46678765433 33446789999999999984 53 5999999999886542111
Q ss_pred EEE---eCC----eEEEEEcccCccCceeEEEEEEcCC
Q psy7042 232 FTV---LDD----YIIIFIKEIRKEDAGDYTVNLSNSS 262 (2245)
Q Consensus 232 ~~~---~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~ 262 (2245)
... .++ ...|.|.....+|.|.|+|.|.|..
T Consensus 161 ~~~~~~~dgt~~~~s~l~v~~~~~~~~~~ytC~v~n~~ 198 (214)
T 1ow0_A 161 RQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEA 198 (214)
T ss_dssp EECSCSSSCCEEEEEEEEEEHHHHHHTCCEEEEEECTT
T ss_pred cccccCCCCcEEEEEEEEECHHHccCCCEEEEEEECCC
Confidence 111 111 1235555544456899999999975
No 460
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.41 E-value=9.5e-13 Score=126.69 Aligned_cols=94 Identities=22% Similarity=0.382 Sum_probs=84.6
Q ss_pred CCCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECCeeccCCCeEEEE-EcCcEEEEEEeeeccCCCeEEEEEEEc
Q psy7042 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVE-TAGGVFRLHFNEVTDVDNGDYTCEAYN 167 (2245)
Q Consensus 89 ~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~-~~~~~~~L~i~~~~~~d~G~Y~C~a~n 167 (2245)
.+|.|...+..+.+.+|+.++|.|.+.|.|.|.|.|+|+|..+....++.+. ..++..+|.|.+++.+|+|.|+|.|.|
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N 83 (99)
T 1g1c_A 4 EAPKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAIN 83 (99)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCCceEecCcceEEcCCCcEEEEEEEEEeCCCEEEEEECCEECCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEEEEE
Confidence 4789999999999999999999999999999999999999999887766553 356667899999999999999999999
Q ss_pred CcccceeEEEEEecC
Q psy7042 168 SVGFAHTSSRVKIGT 182 (2245)
Q Consensus 168 ~~g~~~~~~~l~V~~ 182 (2245)
..|...+++.|.|..
T Consensus 84 ~~g~~~~~~~l~V~~ 98 (99)
T 1g1c_A 84 IAGETSSHAFLLVQA 98 (99)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCCcEEEEEEEEEec
Confidence 999999999998865
No 461
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.41 E-value=1.3e-12 Score=129.27 Aligned_cols=99 Identities=26% Similarity=0.425 Sum_probs=88.8
Q ss_pred CCCCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECCeeccC-CCeEEEEEcC-cEEEEEEeeeccCCCeEEEEEE
Q psy7042 88 GEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISS-GARYRVETAG-GVFRLHFNEVTDVDNGDYTCEA 165 (2245)
Q Consensus 88 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~-~~~~~~~~~~-~~~~L~i~~~~~~d~G~Y~C~a 165 (2245)
..+|.|+..|.++.+.+|+.++|.|.+.|.|.+.|.|+|+|..+.. ..++.+...+ +..+|.|.+++.+|+|.|+|.|
T Consensus 13 ~~~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 92 (116)
T 2kkq_A 13 KRAPMFIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWYTVSA 92 (116)
T ss_dssp CBCCCBSSCCCCEEEETTEEEEEEEEBCCBSCCEEEEEETTEECCCCBTTEEEEECTTCEEEEEEEEECGGGCEEEEEEE
T ss_pred CCCCeEEeCCCcEEEeCCCcEEEEEEEeccCCCEEEEEECCEECcCCCCeEEEEeCCCCeEEEEECCCCcccCEEEEEEE
Confidence 4689999999999999999999999999999999999999999885 5677776654 4557999999999999999999
Q ss_pred EcCcccceeEEEEEecCCCee
Q psy7042 166 YNSVGFAHTSSRVKIGTPPRI 186 (2245)
Q Consensus 166 ~n~~g~~~~~~~l~V~~~P~~ 186 (2245)
.|..|..+.++.|.|..+|..
T Consensus 93 ~N~~G~~~~~~~l~V~~~p~~ 113 (116)
T 2kkq_A 93 VNEAGVTTCNTRLDVTARPNQ 113 (116)
T ss_dssp EETTEEEEEEEEEEEECCSCC
T ss_pred EcCCCeEEEEEEEEEeCCCCC
Confidence 999999999999999988754
No 462
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.41 E-value=8.9e-13 Score=131.45 Aligned_cols=95 Identities=18% Similarity=0.303 Sum_probs=85.0
Q ss_pred CCCceec---CCcceEEeCCCeEEEEEEEeeecCCceEEEECCeeccCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEE
Q psy7042 89 EKPDFIV---PLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEA 165 (2245)
Q Consensus 89 ~~P~~~~---~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a 165 (2245)
.+|.|.. .+..+.+.+|+.++|.|.+.|.|.|.|.|+|+|..+. ..++.+...++...|.|.+++.+|+|.|+|.|
T Consensus 20 ~~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~-~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a 98 (118)
T 2e7c_A 20 EPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLD-TSRVHVRTSDFDTVFFVRQAARSDSGEYELSV 98 (118)
T ss_dssp EEEEECCCTTTSSCEEEESSSCEEEEEEEEEESCCEEEEEETTEECC-CSSCEEEECSSEEEEEESSCCTTTCEEEEEEE
T ss_pred cCCeEecCcccCCCEEEECCCEEEEEEEEccCCCCEEEEEECCEECC-CCcEEEEECCCeEEEEECCCChhcCEEEEEEE
Confidence 5788865 3567899999999999999999999999999999997 45777777777778999999999999999999
Q ss_pred EcCcccceeEEEEEecCCC
Q psy7042 166 YNSVGFAHTSSRVKIGTPP 184 (2245)
Q Consensus 166 ~n~~g~~~~~~~l~V~~~P 184 (2245)
.|..|..+.++.|.|..+|
T Consensus 99 ~N~~G~~~~~~~l~V~~~P 117 (118)
T 2e7c_A 99 QIENMKDTATIRIRVVEKA 117 (118)
T ss_dssp ECSSCEECCEEEEEEECCC
T ss_pred EeCCCeEEEEEEEEEEcCC
Confidence 9999999999999998876
No 463
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.41 E-value=9.5e-13 Score=126.77 Aligned_cols=94 Identities=30% Similarity=0.586 Sum_probs=87.8
Q ss_pred CCCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECCeeccCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEEcC
Q psy7042 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNS 168 (2245)
Q Consensus 89 ~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 168 (2245)
.+|.|...+.+..+.+|+.++|.|.+.|.|.|.+.|+|+|..+..+.++.+...++..+|.|.+++.+|+|.|+|.|.|.
T Consensus 5 ~~P~i~~~~~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 84 (99)
T 3puc_A 5 SKPVIVTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQGGKYKLSEDKGGFFLEIHKTDTSDSGLYTCTVKNS 84 (99)
T ss_dssp EEEEEEECCCCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CCCEEEecCccEEEeCCCcEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEeCCEEEEEECCCCcccCEEEEEEEEeC
Confidence 47889999999999999999999999999999999999999999888999988888888999999999999999999999
Q ss_pred cccceeEEEEEecC
Q psy7042 169 VGFAHTSSRVKIGT 182 (2245)
Q Consensus 169 ~g~~~~~~~l~V~~ 182 (2245)
.|..+.++.|.|..
T Consensus 85 ~g~~~~~~~l~V~~ 98 (99)
T 3puc_A 85 AGSVSSSCKLTIKA 98 (99)
T ss_dssp TEEEEEEEEEEEEC
T ss_pred CCcEeEEEEEEEEe
Confidence 99999899888864
No 464
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.41 E-value=4.8e-13 Score=131.56 Aligned_cols=98 Identities=26% Similarity=0.428 Sum_probs=86.5
Q ss_pred CCCceEEeeccceeeecCccEEEEEEEEeeCCCeEEEeeCCEeeCC-CCcEEEEEe-CcEEEEEEcCCCCCCCeEEEEEE
Q psy7042 2085 AKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITP-SARHHIFAE-GDTYTLIINSVYGVDADEYVCRA 2162 (2245)
Q Consensus 2085 ~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~-~~~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~a 2162 (2245)
..+|.|...+.+..+.+|+.++|.|.+.|.|.|.|.|+|+|..+.. ..++.+..+ +....|.|.++..+|+|.|+|.|
T Consensus 6 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a 85 (110)
T 2dm2_A 6 SGAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMA 85 (110)
T ss_dssp SCCCCBSSCCCCEEEETTCCEEEEEEBCCSSCCEEEEECSSCBCCTTCSSEEEEECTTCEEEEEESSCCTTTCSCCEEEE
T ss_pred CCCCEEEecCcCeEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCeEEEEECCCcEEEEEECCCChhhCEEEEEEE
Confidence 4468888888888999999999999999999999999999999886 567777665 44568999999999999999999
Q ss_pred EeCCceeeEEEEEEEEcCCC
Q psy7042 2163 VNKGGVKSTKAELIIMTAPK 2182 (2245)
Q Consensus 2163 ~N~~G~~~~~~~l~V~~~p~ 2182 (2245)
.|.+|..+..+.|.|..+|.
T Consensus 86 ~N~~g~~~~~~~l~V~~~~~ 105 (110)
T 2dm2_A 86 ANPQGRISCTGRLMVQAVNS 105 (110)
T ss_dssp ECTTCCEEECCCEEEECCSC
T ss_pred EECCCeEEEEEEEEEECCCC
Confidence 99999999999999987664
No 465
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.40 E-value=4.6e-13 Score=178.48 Aligned_cols=163 Identities=17% Similarity=0.279 Sum_probs=120.4
Q ss_pred cceEEeCCCeEEEEEEE-eeecCCceEEEECCeeccC------------CCeEEEEEcCcEEEEEEeeeccCCCeEEEEE
Q psy7042 98 KDLVVPLGKLLTLQCEA-TGTPVPKCRWLRNGREISS------------GARYRVETAGGVFRLHFNEVTDVDNGDYTCE 164 (2245)
Q Consensus 98 ~~~~v~~G~~v~L~C~~-~g~p~~~i~W~~~g~~l~~------------~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 164 (2245)
..+.+.+|++++|.|.+ .+.|.+.|.|+|++..+.. ..|+.+..++ +|.|.+++.+|+|.|+|.
T Consensus 374 ~~~~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~~---~L~i~~v~~~D~G~Y~C~ 450 (581)
T 3o3u_N 374 QNITARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPNG---SLFLPAVGIQDEGIFRCQ 450 (581)
T ss_dssp EEEEEETTSCEEECCTTCCSSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEECTTS---CEEESSCCGGGCEEEEEE
T ss_pred cccceecCCcEEEeeeecCCCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcCCc---eEEEeccccccCeEEEEE
Confidence 34688999999999999 7889999999998763311 2244444333 599999999999999999
Q ss_pred EEcCcccc-eeEEEEEecCCCe-eecCCCceEEcCCCe-EEEEEEEec-CCCceEEEeeCceeeecCCc-eEEEEe----
Q psy7042 165 AYNSVGFA-HTSSRVKIGTPPR-IDRMPNALYIPEGDN-TKVKIFYAG-DQPMEVSLTKNGRVVQSDDR-FKFTVL---- 235 (2245)
Q Consensus 165 a~n~~g~~-~~~~~l~V~~~P~-~~~~~~~~~v~~G~~-~~l~C~~~g-~p~~~i~W~~~g~~l~~~~~-~~~~~~---- 235 (2245)
|.|..|.. ...+.|.|..+|. ....+....+.+|+. +.|.|.+.+ +|.|.|+|+|||+.|..... +.+...
T Consensus 451 ~~n~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~~~~~~~~l~C~~~~~~P~~~i~W~~~g~~l~~~~~~~~~~~~~~~~ 530 (581)
T 3o3u_N 451 AMNRNGKETKSNYRVRVYQIPGKPEIVDSASELTAGVPNKVGTCVSEGSYPAGTLSWHLDGKPLVPNEKGVSVKEQTRRH 530 (581)
T ss_dssp EECTTSCEEEEEEEEEEEBCCCCCEEESCCSEECTTSCEEEEEEEEEEEBSCCEEEEEETTEECCTTSTTEEEEEEEEEC
T ss_pred EEcCCCceeEEEEEEEEEcCCCCCEEEcCCcccccCCceeEEEEECCCCCCCCeEEEEECCEECCCCCCeEEEEeeeEEc
Confidence 99999887 6688899977543 222233333556655 467999987 69999999999999875432 222111
Q ss_pred -C-----CeEEEEEcccC-ccCceeEEEEEEcCCc
Q psy7042 236 -D-----DYIIIFIKEIR-KEDAGDYTVNLSNSSG 263 (2245)
Q Consensus 236 -~-----~~~~L~i~~~~-~~d~G~Y~C~a~n~~g 263 (2245)
+ ..++|.|.++. .++.|.|+|.|+|..+
T Consensus 531 ~~~g~y~~~s~L~i~~~~~~d~~~~y~C~~~n~~~ 565 (581)
T 3o3u_N 531 PETGLFTLQSELMVTPARGGDPRPTFSCSFSPGLP 565 (581)
T ss_dssp TTTCCEEEEEEEEECCCTTSCSCCCEEEEEECSSC
T ss_pred CCCceEEEEEEEEEEeccccCCCceEEEEEeccCC
Confidence 1 12579999998 5558899999999864
No 466
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.40 E-value=1.7e-12 Score=147.52 Aligned_cols=161 Identities=17% Similarity=0.242 Sum_probs=113.8
Q ss_pred CceEEcCCCeEEEEEEecCcC--CCeEEEeeCC--Eec-------------------cCCceEEEEec--CcEEEEEEee
Q psy7042 1705 KDLVVPLGKLLTLQCEATGTP--VPKCRWLRNG--REI-------------------SSGARYRVETA--GGVFRLHFNE 1759 (2245)
Q Consensus 1705 ~~~~~~~G~~v~L~C~~~~~p--~~~v~W~~~~--~~l-------------------~~~~~~~~~~~--~~~~~L~i~~ 1759 (2245)
..+.+.+|++++|.|.+.+.+ .+.+.|+|.. ..+ ....|+.+..+ .+.++|.|.+
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 87 (221)
T 3m8o_H 8 GGGLVQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQMNS 87 (221)
T ss_dssp SCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEEECS
T ss_pred CCEEEcCCCCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEEECC
Confidence 457799999999999998643 5789998732 111 01256666543 5677899999
Q ss_pred eccCCCeEEEEEEecCc--eeeEEEEEEEec----CCCccc-cCCCceEEcCCCeEEEEEEEec-cCC--cEEEEEECCE
Q psy7042 1760 VTDVDNGDYTCEAYNSV--GFAHTSSRVKIG----TPPRID-RMPNALYIPEGDNTKVKIFYAG-DQP--MEVSLTKNGR 1829 (2245)
Q Consensus 1760 v~~~d~G~Y~C~~~n~~--g~~~~~~~l~V~----~~p~~~-~~~~~~~~~~g~~~~l~C~~~~-~p~--~~v~W~~~g~ 1829 (2245)
++.+|+|.|.|.+.+.. ........|.|. .+|.+. ..+... .+|+.++|.|.+.+ .|. +.+.|+++|+
T Consensus 88 v~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~--~~g~~v~L~C~~~~~~P~~~~~v~W~~~g~ 165 (221)
T 3m8o_H 88 LKSDDTAMYYCVIRGDVYNRQWGQGTLVTVSSASPTSPKVFPLSLCST--QPDGNVVIACLVQGFFPQEPLSVTWSESGQ 165 (221)
T ss_dssp CCGGGCEEEEEEEESCTTCCCBBCCEEEEECSCCCBCCEEEEEECCSC--CCTTEEEEEEEEEEEBSSCSEEEEESCCST
T ss_pred CCHHHCEEEEEEEECCChhheECCCEEEEEecCCCCCCeEEEecCccc--ccCCCEEEEEEEEeeECCCCEEEEEEECCE
Confidence 99999999999998863 222233456664 244444 222222 68999999999998 665 5999999997
Q ss_pred Eeec----------CCceEEEEcCCeEEEEEcccCcccceEEEEEEEcCCeee
Q psy7042 1830 VVQS----------DDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV 1872 (2245)
Q Consensus 1830 ~l~~----------~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~ 1872 (2245)
.+.. ...+.+ ...|.|.....+|.|.|+|.|.|..+..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~-----~s~L~i~~~~~~d~g~ytC~v~~~~~~~ 213 (221)
T 3m8o_H 166 GVTARNFPPSQDASGDLYTT-----SSQLTLPATQCLAGKSVTCHVKHYTNPS 213 (221)
T ss_dssp TCEEEECCCEECSSSSCEEE-----EEEEEEEGGGSCTTCEEEEEEEETTSCC
T ss_pred ECceEEcCceeeCCCCcEEE-----EEEEEECHHHcCCCCeEEEEEEECCCCc
Confidence 6621 122221 1358899999999999999999987643
No 467
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.40 E-value=2.7e-12 Score=146.62 Aligned_cols=175 Identities=12% Similarity=0.159 Sum_probs=119.1
Q ss_pred cceEEeCCCeEEEEEEEee--ecCCceEEEECC--e---ec---c-----------CCCeEEEEEcC--cEEEEEEeeec
Q psy7042 98 KDLVVPLGKLLTLQCEATG--TPVPKCRWLRNG--R---EI---S-----------SGARYRVETAG--GVFRLHFNEVT 154 (2245)
Q Consensus 98 ~~~~v~~G~~v~L~C~~~g--~p~~~i~W~~~g--~---~l---~-----------~~~~~~~~~~~--~~~~L~i~~~~ 154 (2245)
..+.+.+|++|+|.|.+.+ .+...+.|+|.. . .+ . ..+|+.+..++ +..+|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (230)
T 3n9g_H 8 GAEVRKPGASTKVSCKASGYTFTHYYMHWVRQAPGQGLEWMGIINPSGGSTTYAQKLQGRVTMTRDTSTSTVYMELSSLR 87 (230)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCEEEcCCCCEEEEEEeecceecCcEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECCCC
Confidence 3578999999999999975 345679999832 1 11 0 12467765443 56789999999
Q ss_pred cCCCeEEEEEEEcCcc-----c---ceeEEEEEec----CCCeeecCCCceEEcCCCeEEEEEEEec-CC-CceEEEeeC
Q psy7042 155 DVDNGDYTCEAYNSVG-----F---AHTSSRVKIG----TPPRIDRMPNALYIPEGDNTKVKIFYAG-DQ-PMEVSLTKN 220 (2245)
Q Consensus 155 ~~d~G~Y~C~a~n~~g-----~---~~~~~~l~V~----~~P~~~~~~~~~~v~~G~~~~l~C~~~g-~p-~~~i~W~~~ 220 (2245)
.+|+|.|.|.+.+..+ . ....+.|.|. .+|.+...+....+.+|+.++|.|.+.+ .| .+.+.| +
T Consensus 88 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~~~~v~W--~ 165 (230)
T 3n9g_H 88 SEDTAVYYCARDWGSNYVWGSYPKYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSW--N 165 (230)
T ss_dssp GGGCEEEEEEEECCCSSSTTCCEEEECCCEEEEECSSCCBCCEEEEECCCCCCCTTCEEEEEEEEEEEBSSCCEEEE--G
T ss_pred hhhCEEEEEEEccCCCCcccccccccCCCEEEEEEecCCCCCEEEecCCCccccCCCCEEEEEEEEeEECCCEEEEE--C
Confidence 9999999999987541 1 1123457774 3455554444444578999999999987 45 457999 6
Q ss_pred ceeeecCCce--EEEEeC----CeEEEEEcccCccCceeEEEEEEcCCcceEEEEEEEEec
Q psy7042 221 GRVVQSDDRF--KFTVLD----DYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITG 275 (2245)
Q Consensus 221 g~~l~~~~~~--~~~~~~----~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 275 (2245)
|..+...... .....+ ..+.|.|.....+| |.|+|.|.|..+.....+.|.|.+
T Consensus 166 ~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~v~~ 225 (230)
T 3n9g_H 166 SGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPKS 225 (230)
T ss_dssp GGTBCTTEEECCCEECTTSCEEEEEEEEEESTTBTT-BCCEEEEEEGGGTEEEEEECCCCT
T ss_pred CcccCCCeEeCCceECCCCCEEEEEEEEECHHHcCC-CeEEEEEEECCCCcceEEEccCCC
Confidence 6554321100 000111 12368999999999 999999999988777777776653
No 468
>3d85_D IL-12B, interleukin-12 subunit P40, cytotoxic lymphocyte; FAB, immune system/cytokine complex; 1.90A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 3d87_B* 3duh_A* 1f42_A* 1f45_A* 3hmx_A* 3qwr_A*
Probab=99.40 E-value=3.9e-12 Score=149.84 Aligned_cols=246 Identities=15% Similarity=0.137 Sum_probs=148.6
Q ss_pred eeCCCeEEEEEeeeecCCCeEEEEeCCeEeeccCeEEEEecCCeEEEEEcCCCCCcCEEEEEEEEeCCCCceeEEEEEee
Q psy7042 588 FDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQIS 667 (2245)
Q Consensus 588 ~~~g~~~~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~ 667 (2245)
+..|++++|.|.+.. +. .|.|.+++..... +..++|.|.++...|+|+|+|.| .|.....+.+.|.
T Consensus 18 ~~~G~~v~l~C~~~~-~~-~i~W~~~~~~~~~---------~~~~~L~i~~~~~~d~G~YtC~~---~~~~~~~~~l~v~ 83 (306)
T 3d85_D 18 DAPGEMVVLTCDTPE-ED-GITWTLDQSSEVL---------GSGKTLTIQVKEFGDAGQYTCHK---GGEVLSHSLLLLH 83 (306)
T ss_dssp SCCCEEEEEECSSSC-CS-SCEEEETTCCCCC---------EESSEEEEEECSGGGCEEEEEEE---TTEEEEEEEEEEE
T ss_pred CccCCcEEEECCCCC-CC-cCEEEECCccccC---------CCCCEEEEEecCcCCCceEEEee---CCcccceEEEEEE
Confidence 446999999999974 33 8999999874321 12368999999999999999999 4666555555443
Q ss_pred -------------CCCCCC--CCCeeeeecCC-cEEEEeeCCCCCCCcccccEEEEeeeCCCCCeEEEce--eeeeeE--
Q psy7042 668 -------------DRPDPP--QFPTVEDIGHD-SLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGN--TRFTTM-- 727 (2245)
Q Consensus 668 -------------~~P~~p--~~~~~~~~~~~-si~lsW~~p~~~~~~~~~~y~v~~~~~~~~~w~~~~~--~~~~~~-- 727 (2245)
.++.|| .++.+...... +++++|.+. .+.+ ..+.|...+.. ....|..+.. .....+
T Consensus 84 ~~~~~~~~t~i~~~~~~pp~~~~lsC~~~~~~~~~~C~W~pg-~~~~-l~~~~~~~r~~-~~~~~~~C~~~~~~~~~c~v 160 (306)
T 3d85_D 84 KKEDGIWSTDILKDQKEPKNKTFLRCEAKNYSGRFTCWWLTT-ISTD-LTFSVKSSRGS-SDPQGVTCGAATLSAERVRG 160 (306)
T ss_dssp EEETTEECCCSSCCCC---CCCCCEEEBSSSSSEEEEEEEES-CCSS-EEEEEEEEECS-SSCEEEEECCCEEEEEEEC-
T ss_pred eccCCcceeeeecccCCCCCCCcceEEcCCcccCcEEEecCC-CCCc-eeEEEEEEecC-CCCcceECCCCCCCccceee
Confidence 223333 35555544433 899999953 2322 33455544322 2223433321 111111
Q ss_pred -----------EEecCCCC----CEEEEEEEEEecccCCCCCCCCccEEecCccccccccccccccCCCceeeccccccc
Q psy7042 728 -----------AITGLSPG----HQYEFRVYAENVYGRSDPSTTSDLITTKDTFKKQIKKRQYDFDETGKKIRGKADEKV 792 (2245)
Q Consensus 728 -----------~i~~L~p~----t~y~~~v~a~n~~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 792 (2245)
....+-|. ..|.|+|.|.|..|....+. . +
T Consensus 161 ~~~~~~~~~~c~~~~~cp~~~~~~~y~~~V~A~n~lg~~s~~~--~-f-------------------------------- 205 (306)
T 3d85_D 161 DNKEYEYSVECQEDSACPAAEESLPIEVMVDAVHKLKYEQYTS--S-F-------------------------------- 205 (306)
T ss_dssp -CEEEEEEEEEEETTCCTTSCCCSCEEEEEEEEETTEEEEEEE--E-E--------------------------------
T ss_pred cCccccceeeeeeccccccccccEEEEEEEEEEccCCccccce--E-E--------------------------------
Confidence 12334444 47889999988877421110 0 0
Q ss_pred ccCCceEEEEeeeccCccccccccceecccccccccccCceeEEEEeeecccCCeeEEEeeccCCchhhhhhheeeeeee
Q psy7042 793 SDYDQYVFDIYSKYVPQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMN 872 (2245)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 872 (2245)
T Consensus 206 -------------------------------------------------------------------------------- 205 (306)
T 3d85_D 206 -------------------------------------------------------------------------------- 205 (306)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCceEeecccccCCcceEEEEEEecCCCCCcccEEeeee-CceEEEEecCCCCCCC---CccceEEEeeeecCCCce
Q psy7042 873 QLHHPKLINLHDAFEDDDEMVLIFEVLDRPHPPENLHADEFA-GDSLTLYWTPPRDNGG---SEITNYVVEKKDYNSTVW 948 (2245)
Q Consensus 873 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~p~~l~~~~~~-~~~~~l~W~~p~~~~g---~~i~~y~i~~~~~~~~~~ 948 (2245)
..+....|.||.+|.+.... ...+.|+|++|...+. -....|+|+|+..+...|
T Consensus 206 ----------------------~~~~iVkPdPP~~l~~~~~~~~~~l~vsW~~P~~~~~p~~~~~L~Y~vryr~~~~~~~ 263 (306)
T 3d85_D 206 ----------------------FIRDIIKPDPPKNLQLKPLKNSRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKSKREK 263 (306)
T ss_dssp ----------------------CHHHHBCCCCCEEEEEEEC----CEEEEEECCTTSCSCTTTSCEEEEEEEECC-----
T ss_pred ----------------------EehhcEecCCCceEEEEEecCCCcEEEEEcCCCCCcCCCceeeEEEEEEEEECCCCcc
Confidence 00001478899999998744 3789999999864332 133699999998766555
Q ss_pred EEecceeeeceEEEecCCCCceeeEEEEEEeccccCCCccccC
Q psy7042 949 TKVSSYVTTPFVRVRNLAIGSTYEFRVMAENQYGLSKPALTID 991 (2245)
Q Consensus 949 ~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~s~~~~ 991 (2245)
..+ .....+++.| .+++.|.|+|+|.+..|.|.+|..|.
T Consensus 264 ~~~-~~~~~ts~~l---~~~~~Y~vqVRa~~~~~~G~WSeWS~ 302 (306)
T 3d85_D 264 KDR-VFTDKTSATV---ICRKNASISVRAQDRYYSSSWSEWAS 302 (306)
T ss_dssp -CE-EEESSSEEEE---CCCSSCEEEEEEEESSSCCCCCCCEE
T ss_pred EEE-eeccccEEEE---eCCCeEEEEEEeccCCCCCCCCCCCC
Confidence 543 2234456655 46999999999999999888886653
No 469
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=99.40 E-value=3.8e-12 Score=134.06 Aligned_cols=156 Identities=12% Similarity=0.191 Sum_probs=110.3
Q ss_pred cCCcceEEeCCCeEEEEEEEeeecCCc-eEEEE--CCeeccCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEEcCccc
Q psy7042 95 VPLKDLVVPLGKLLTLQCEATGTPVPK-CRWLR--NGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGF 171 (2245)
Q Consensus 95 ~~~~~~~v~~G~~v~L~C~~~g~p~~~-i~W~~--~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~ 171 (2245)
+.|.+..|.+|+++.|.|.+. .+.|. +.|.- ++..+. ....+...|.|.+++. | |.|.|.+......
T Consensus 4 v~P~~~~V~~G~Sv~l~Cs~~-c~~p~~~~~~t~l~~~~~~-------~~~~~~~~l~l~~vs~-~-g~y~C~~~c~~~~ 73 (185)
T 1iam_A 4 VSPSKVILPRGGSVLVTCSTS-CDQPKLLGIETPLPKKELL-------LPGNNRKVYELSNVQE-D-SQPMCYSNCPDGQ 73 (185)
T ss_dssp EESSEEEEETTEEEEEEEEEC-SSSCSEEEEECSSCEEEEC-------SSSSSEEEEEEEEECS-C-BCCEEEEECSSCE
T ss_pred EECCCcEEeCCCCEEEEEEcc-CCCCccceEEeeCCCccEe-------ccCCceeEEEEEecCc-C-CEEEEEEECCCCc
Confidence 455667899999999999996 45555 77753 111110 1112334689999984 4 9999999776566
Q ss_pred ceeEEEEEecCCCe-eecCCCceEEcCCCeEEEEEEEec-CCCc--eEEEeeCceeeecCCceEEEEeCCeEEEEEcccC
Q psy7042 172 AHTSSRVKIGTPPR-IDRMPNALYIPEGDNTKVKIFYAG-DQPM--EVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIR 247 (2245)
Q Consensus 172 ~~~~~~l~V~~~P~-~~~~~~~~~v~~G~~~~l~C~~~g-~p~~--~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~ 247 (2245)
.+.+++|+|..+|. +...+....+.+|+.++|.|.+.| .|.. .|+|||+++.+..... .......+|.+....
T Consensus 74 ~~~~~~l~V~~~P~~v~i~~~~~~~~~G~~~tL~C~v~g~~P~~~l~i~w~kg~~~l~~~~~---~~~~~~~tl~~~~~r 150 (185)
T 1iam_A 74 STAKTFLTVYWTPERVELAPLPSWQPVGKQLTLRCQVEGGAPRAQLTVVLLRGEKELKREPA---VGEPAEVTTTVLVRR 150 (185)
T ss_dssp EEEECEEEEEBCCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEEC---CTTTEEEEEEEECCS
T ss_pred eEEEEEEEEeCCCCCCEEccCCccccCCCcEEEEEEcCCccCCCCcEEEEEeCCEEcccccC---CCccccEEEEEecee
Confidence 67788999998876 445566667999999999999987 5654 4899999999864221 011223467777666
Q ss_pred ccCceeEEEEEEcCCc
Q psy7042 248 KEDAGDYTVNLSNSSG 263 (2245)
Q Consensus 248 ~~d~G~Y~C~a~n~~g 263 (2245)
.+|...|+|+|.|..+
T Consensus 151 eD~g~~~sC~A~~~l~ 166 (185)
T 1iam_A 151 DHHGAQFSCRTELDLR 166 (185)
T ss_dssp SCSSCEEEEEEEEECG
T ss_pred ccCCCeEEEEEEecCc
Confidence 6666699999998875
No 470
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.40 E-value=6.6e-13 Score=132.51 Aligned_cols=98 Identities=22% Similarity=0.266 Sum_probs=86.5
Q ss_pred CCCceEEeeccceeeecCccEEEEEEEEeeCCCeEEEeeCCEeeCC-CCcEEEEEeCcEEEEEEcCCCCCCCeEEEEEEE
Q psy7042 2085 AKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITP-SARHHIFAEGDTYTLIINSVYGVDADEYVCRAV 2163 (2245)
Q Consensus 2085 ~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~-~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 2163 (2245)
..+|.|...+.+..+.+|+.++|.|.+.|.|.|.|.|+|+|..+.. ..++.+..++ .|.|.++..+|+|.|+|.|.
T Consensus 6 ~~pP~i~~~p~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~~~~~~~~~~~~---~L~i~~v~~~D~G~Y~C~a~ 82 (118)
T 2eo9_A 6 SGPPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENG---VLQIRYAKLGDTGRYTCIAS 82 (118)
T ss_dssp CCSCCCSBCCCCEEEETTCEEEEECBCCCSSCCEEEEEESSSBCCTTSTTEEEEETT---EEEEESCCGGGCCCEEEEEE
T ss_pred CCCCEEEcCCCCEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCeEEEccCC---EEEEccCCcCCCEEEEEEEE
Confidence 4578888888889999999999999999999999999999998864 5567776666 79999999999999999999
Q ss_pred eCCceeeEEEEEEEEcCCCCCC
Q psy7042 2164 NKGGVKSTKAELIIMTAPKFNV 2185 (2245)
Q Consensus 2164 N~~G~~~~~~~l~V~~~p~~~~ 2185 (2245)
|..|..+.++.|.|..++....
T Consensus 83 n~~g~~~~~~~l~V~~~~~p~~ 104 (118)
T 2eo9_A 83 TPSGEATWSAYIEVQEFGVPVQ 104 (118)
T ss_dssp CSSCEEEEECCEEEECCSCCCC
T ss_pred cCCCcEEEEEEEEEEeCCCCcc
Confidence 9999999999999988765443
No 471
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.39 E-value=1.4e-12 Score=126.50 Aligned_cols=88 Identities=20% Similarity=0.216 Sum_probs=74.3
Q ss_pred eecCccEEEEEEEEeeCCCeEEEeeCCEeeCCCCcEEEEEeC-------cEEEEEEcCCCCCCCeEEEEEEEeCCceeeE
Q psy7042 2099 AIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEG-------DTYTLIINSVYGVDADEYVCRAVNKGGVKST 2171 (2245)
Q Consensus 2099 ~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~-------~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~ 2171 (2245)
...+..+.|.|.+.|.|.|+|+|+|||.+|....++.+.... ....|.|.++...|+|.|+|.|.|.+|.+..
T Consensus 12 ~~~~~~~~l~c~v~G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~~ 91 (126)
T 1he7_A 12 AVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASA 91 (126)
T ss_dssp CCCCCEEEEEEEECCSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEEEE
T ss_pred CccCccEEEEEEEeeeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeEEE
Confidence 346788999999999999999999999999988776543221 2457999999999999999999999999999
Q ss_pred EEEEEEEcCCCCCCC
Q psy7042 2172 KAELIIMTAPKFNVP 2186 (2245)
Q Consensus 2172 ~~~l~V~~~p~~~~~ 2186 (2245)
++.|.|...|.-..+
T Consensus 92 t~~l~v~~~P~~~~~ 106 (126)
T 1he7_A 92 SIMAAFMDNPFEFNP 106 (126)
T ss_dssp EEEECCCSCTTSCCC
T ss_pred EEEEEEEcCCCCCCC
Confidence 999999877754433
No 472
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.39 E-value=8e-13 Score=163.05 Aligned_cols=169 Identities=11% Similarity=0.158 Sum_probs=118.4
Q ss_pred ecCCcceE-EeCCCeEEEEEEEeee-cCC---ceEEEECCeeccCCCeE--EEEEc---CcEEEEEEeeeccCCCeEEEE
Q psy7042 94 IVPLKDLV-VPLGKLLTLQCEATGT-PVP---KCRWLRNGREISSGARY--RVETA---GGVFRLHFNEVTDVDNGDYTC 163 (2245)
Q Consensus 94 ~~~~~~~~-v~~G~~v~L~C~~~g~-p~~---~i~W~~~g~~l~~~~~~--~~~~~---~~~~~L~i~~~~~~d~G~Y~C 163 (2245)
+.+|.... +..|+.++|.|.+.|. |.| .|.|+|++..+...... ..... .....|.|..++.+|+|.|+|
T Consensus 171 ~~~p~~~~~~~~g~~v~L~C~~~g~~P~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C 250 (376)
T 2aty_A 171 IFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKC 250 (376)
T ss_pred EeCcCHHHceeeCCeeEEEEEEeccccCCCccEEEEEECCccccCcccCCCCcccCCcEEEEEEEEechHhccCCCEEEE
Confidence 44555444 7889999999999987 333 69999998765422100 00011 123369999999999999999
Q ss_pred EEEcCcccceeEEEE----EecCCCeeecCCCceEEcCCCeEEEEEEEecC-C-CceEEEeeCceeeecCCceEE--EEe
Q psy7042 164 EAYNSVGFAHTSSRV----KIGTPPRIDRMPNALYIPEGDNTKVKIFYAGD-Q-PMEVSLTKNGRVVQSDDRFKF--TVL 235 (2245)
Q Consensus 164 ~a~n~~g~~~~~~~l----~V~~~P~~~~~~~~~~v~~G~~~~l~C~~~g~-p-~~~i~W~~~g~~l~~~~~~~~--~~~ 235 (2245)
.|.+..+.......+ .+..+|.+...+......+|+.++|.|.+.|. | .+.|+|+|||..+........ ..+
T Consensus 251 ~~~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~~d 330 (376)
T 2aty_A 251 RVNSAAFPAPIEKTISKTKGRPKAPQLYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQWNGQPAENYKNTQPIMNTN 330 (376)
T ss_pred EEecCCCCCceEEEEcCCCCCCcCCeEEeeCCCHHHhcCCceEEEEEEEEeECCCcEEEEEECCEECCCeEeCCceECCC
Confidence 999987754433333 56778888887777666679999999999985 3 568999999998743222111 111
Q ss_pred CC---eEEEEEcccCccCceeEEEEEEcCC
Q psy7042 236 DD---YIIIFIKEIRKEDAGDYTVNLSNSS 262 (2245)
Q Consensus 236 ~~---~~~L~i~~~~~~d~G~Y~C~a~n~~ 262 (2245)
+. ...|.|.....+|.|.|+|.|.|..
T Consensus 331 gty~~~s~L~i~~~~~~~~~~YtC~v~h~~ 360 (376)
T 2aty_A 331 ESYFVYSKLNVQKSNWEAGNTFTCSVLHEG 360 (376)
T ss_pred CCEEEEEEEEEcHHHhCCCCcEEEEEEeCC
Confidence 11 2357777777778999999999875
No 473
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.39 E-value=7.6e-13 Score=122.46 Aligned_cols=87 Identities=21% Similarity=0.363 Sum_probs=75.1
Q ss_pred CCCceecCCcceE--EeCCCeEEEEEEEeeecCCceEEEECCeeccCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEE
Q psy7042 89 EKPDFIVPLKDLV--VPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAY 166 (2245)
Q Consensus 89 ~~P~~~~~~~~~~--v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 166 (2245)
.||.|..++.+.. +.+|+.++|.|.+.+ |.+.|.|+|||..|..++++.+..+++..+|.|.+++.+|+|.|+|.|.
T Consensus 3 ~P~~i~~p~~~~~v~~~~g~~v~l~C~v~~-p~~~v~W~k~g~~i~~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 81 (91)
T 2lvc_A 3 MPVHIVDPREHVFVHAITSECVMLACEVDR-EDAPVRWYKDGQEVEESDFVVLENEGPHRRLVLPATQPSDGGEFQCVAG 81 (91)
T ss_dssp CCCCCCBCCSCEEEECCTTCCEEEEEECSC-TTSCCEEEETTSCCCCCSSCEEEEETTEEEEEESSCCGGGCSEEEEECS
T ss_pred CCcEEeccCCCeEEEEECCCcEEEEEEECC-CCcEEEEEECCEEeeeeeeeeEEecCCeEEEEeCCCChhhcEEEEEEEc
Confidence 3677777777654 468999999999976 8889999999999999999999999998899999999999999999996
Q ss_pred cCcccceeEEEEEe
Q psy7042 167 NSVGFAHTSSRVKI 180 (2245)
Q Consensus 167 n~~g~~~~~~~l~V 180 (2245)
|. +.+++|+|
T Consensus 82 n~----~~~~~ltV 91 (91)
T 2lvc_A 82 DE----CAYFTVTI 91 (91)
T ss_dssp SC----EEEEEEEC
T ss_pred ce----EEEEEEEC
Confidence 63 56676765
No 474
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.39 E-value=1.9e-12 Score=150.20 Aligned_cols=172 Identities=15% Similarity=0.198 Sum_probs=119.1
Q ss_pred CCceEEcCCCeEEEEEEecC--cCCCeEEEeeCC--Ee---c--------------cCCceEEEEec--CcEEEEEEeee
Q psy7042 1704 LKDLVVPLGKLLTLQCEATG--TPVPKCRWLRNG--RE---I--------------SSGARYRVETA--GGVFRLHFNEV 1760 (2245)
Q Consensus 1704 ~~~~~~~~G~~v~L~C~~~~--~p~~~v~W~~~~--~~---l--------------~~~~~~~~~~~--~~~~~L~i~~v 1760 (2245)
+..+.+.+|++++|.|.+.+ .+...+.|+|.. .. + ....|+.+..+ .+..+|+|.++
T Consensus 7 p~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (253)
T 3liz_H 7 SGGGLVQPGGSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQMSSL 86 (253)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEECSC
T ss_pred CCCEEECCCCcEEEEEEeeCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECCC
Confidence 34578999999999999976 335679998842 11 1 01245555432 46788999999
Q ss_pred ccCCCeEEEEEEecCc----eeeEEEEEEEec----CCCccccCCCceEEcCCCeEEEEEEEec-cCCc-EEEEEECCEE
Q psy7042 1761 TDVDNGDYTCEAYNSV----GFAHTSSRVKIG----TPPRIDRMPNALYIPEGDNTKVKIFYAG-DQPM-EVSLTKNGRV 1830 (2245)
Q Consensus 1761 ~~~d~G~Y~C~~~n~~----g~~~~~~~l~V~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~v~W~~~g~~ 1830 (2245)
+.+|+|.|.|.+.+.. +.......|.|. .+|.+...+....+..|+.++|.|.+.+ .|.+ .+.|+++|..
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~~~~ 166 (253)
T 3liz_H 87 KSEDTAMYYCTRDPAGRAWFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLS 166 (253)
T ss_dssp CGGGCEEEEEEECCBTTTBCCEECCCEEEEECSSCCBCCEEEEECC------CCEEEEEEEEEEEBSSCCEEEEGGGTBC
T ss_pred ChhhCEEEEEEEecCCcceeeEECCCEEEEEeccCCCCCeEEEecCCcccCCCCcEEEEEEEeeEeCCCeEEEEEeCCee
Confidence 9999999999998752 222334567775 4566654444445667999999999998 6766 8999999873
Q ss_pred ee--------cCCceEEEEcCCeEEEEEcccCcccceEEEEEEEcCCeeeEEEEEEEEe
Q psy7042 1831 VQ--------SDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINIT 1881 (2245)
Q Consensus 1831 l~--------~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 1881 (2245)
+. ....+.+ ...|.|.....+| |.|+|.|.|..+.......+.+.
T Consensus 167 ~~~~~~~~~~~~g~~~~-----~s~L~i~~~~~~d-g~ytC~v~~~~~~~~~~~~~~~~ 219 (253)
T 3liz_H 167 SGVHTFPAVLQSDLYTL-----SSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIVPR 219 (253)
T ss_dssp TTEEECCCEEETTEEEE-----EEEEEEETTSTTT-SCCEEEEEEGGGTEEEEEECCCC
T ss_pred cceEeCCccccCCeEEE-----EEEEEEcHHHCCC-ceEEEEEEECCCCcceEEEecCc
Confidence 21 1122211 1468999999999 99999999999987777776654
No 475
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.39 E-value=2.3e-13 Score=155.34 Aligned_cols=172 Identities=15% Similarity=0.160 Sum_probs=112.0
Q ss_pred eeccCCceE-EcCCCeEEEEEEecCc---CCC-eEEEeeCCEeccCCceE-EEEecC----cEEEEEEeeeccCCCeEEE
Q psy7042 1700 FIVPLKDLV-VPLGKLLTLQCEATGT---PVP-KCRWLRNGREISSGARY-RVETAG----GVFRLHFNEVTDVDNGDYT 1769 (2245)
Q Consensus 1700 ~~~~~~~~~-~~~G~~v~L~C~~~~~---p~~-~v~W~~~~~~l~~~~~~-~~~~~~----~~~~L~i~~v~~~d~G~Y~ 1769 (2245)
++.++.... +.+|++++|.|.+.+. |.+ .|.|+|++..+...... .....+ ....|.|.+++.+|+|.|+
T Consensus 19 ~~~pp~~~~~v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~ 98 (239)
T 1i1c_A 19 FIFPPKTKDVLGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLNGKTFK 98 (239)
T ss_dssp EEECCCHHHHTTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEE
T ss_pred EEECCChHHhcccCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHccCCCeEE
Confidence 344444344 7899999999999876 665 89999998765422110 011111 2346999999999999999
Q ss_pred EEEecCceeeEE--EEEE--EecCCCccccCCCceEEcCCCeEEEEEEEecc-CC-cEEEEEECCEEeecCCceEEEEcC
Q psy7042 1770 CEAYNSVGFAHT--SSRV--KIGTPPRIDRMPNALYIPEGDNTKVKIFYAGD-QP-MEVSLTKNGRVVQSDDRFKFTVLD 1843 (2245)
Q Consensus 1770 C~~~n~~g~~~~--~~~l--~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~v~W~~~g~~l~~~~~~~~~~~~ 1843 (2245)
|.+.|..+.... .+.+ .+..+|.+...+.......|+.+.|.|.+.|. |+ ..|+|+|||+.+............
T Consensus 99 C~~~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~ 178 (239)
T 1i1c_A 99 CKVNSGAFPAPIEKSISKPEGTPRGPQVYTMAPPKEEMTQSQVSITCMVKGFYPPDIYTEWKMNGQPQENYKNTPPTMDT 178 (239)
T ss_dssp EEEECSSSSSCEEEEECCCSSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEECT
T ss_pred EEEecccCCCCcEEEEecCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeeeECCCeEEEEEECCEECCCceecCceECC
Confidence 999998775322 3322 34567776544333223358899999999984 54 489999999987432111111122
Q ss_pred C--e---EEEEEcccCcccceEEEEEEEcCCee
Q psy7042 1844 D--Y---IIIFIKEIRKEDAGDYTVNLSNSSGS 1871 (2245)
Q Consensus 1844 ~--~---~~l~i~~~~~~d~G~Y~C~a~n~~g~ 1871 (2245)
+ . ..|.|.....+|.|.|+|.|.|....
T Consensus 179 dgt~~~~s~l~v~~~~~~~~g~YtC~v~n~~l~ 211 (239)
T 1i1c_A 179 DGSYFLYSKLNVKKETWQQGNTFTCSVLHEGLE 211 (239)
T ss_dssp TSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred CCCEEEEEEEEEChhhcCCCCEEEEEEECCCCC
Confidence 1 1 23445554445789999999998643
No 476
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.39 E-value=2.5e-12 Score=135.21 Aligned_cols=101 Identities=27% Similarity=0.496 Sum_probs=88.0
Q ss_pred CCCceEEeeccceeeecCccEEEEEEEEeeCCCeEEEeeCCEeeCCCCcEEEEEe-CcEEEEEEcCCCCCCCeEEEEEEE
Q psy7042 2085 AKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAE-GDTYTLIINSVYGVDADEYVCRAV 2163 (2245)
Q Consensus 2085 ~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~a~ 2163 (2245)
..+|.|...+.+..+.+|+.++|.|.+.|.|.|.|.|+|+|..+....++.+..+ +....|.|.++..+|+|.|+|.|.
T Consensus 39 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 118 (154)
T 1fhg_A 39 HVKPYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYTCKAV 118 (154)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEECTTCEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCCeEEccCCcEEEeCCCeEEEEEEEEEecCCEEEEEECCEECCCCCcEEEEECCCCeEEEEECCCChhcCEEEEEEEE
Confidence 4569999999999999999999999999999999999999999998888887754 335789999999999999999999
Q ss_pred eCCceeeEEEEEEEEcCCCCCC
Q psy7042 2164 NKGGVKSTKAELIIMTAPKFNV 2185 (2245)
Q Consensus 2164 N~~G~~~~~~~l~V~~~p~~~~ 2185 (2245)
|.+|.....+.|.|..+|.+..
T Consensus 119 N~~G~~~~~~~l~V~~~p~~~~ 140 (154)
T 1fhg_A 119 NSLGEATCTAELLVETMGKEGE 140 (154)
T ss_dssp ETTEEEEEEEEEEEECC-----
T ss_pred ECCCeEEEEEEEEEeCcCcCCC
Confidence 9999999999999998887654
No 477
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.39 E-value=1.1e-12 Score=152.03 Aligned_cols=171 Identities=11% Similarity=0.130 Sum_probs=116.4
Q ss_pred CCceEEcCCCeEEEEEEecCcC--CCeEEEeeCC--Eecc-----------------CCceEEEEec--CcEEEEEEeee
Q psy7042 1704 LKDLVVPLGKLLTLQCEATGTP--VPKCRWLRNG--REIS-----------------SGARYRVETA--GGVFRLHFNEV 1760 (2245)
Q Consensus 1704 ~~~~~~~~G~~v~L~C~~~~~p--~~~v~W~~~~--~~l~-----------------~~~~~~~~~~--~~~~~L~i~~v 1760 (2245)
+..+.+.+|++++|.|.+.+.+ .+.+.|+|+. ..+. ...|+.+..+ .+..+|+|.++
T Consensus 13 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 92 (261)
T 2xqy_G 13 PGAELVKPGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLSSL 92 (261)
T ss_dssp CSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSC
T ss_pred CCCEEEcCCCCEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEcCC
Confidence 4567899999999999998766 5789999863 2110 1246666543 45778999999
Q ss_pred ccCCCeEEEEEEecCcee---eEEEEEEEecC----CCccccCCCceEEcCCCeEEEEEEEecc-CCc-EEEEEECCEEe
Q psy7042 1761 TDVDNGDYTCEAYNSVGF---AHTSSRVKIGT----PPRIDRMPNALYIPEGDNTKVKIFYAGD-QPM-EVSLTKNGRVV 1831 (2245)
Q Consensus 1761 ~~~d~G~Y~C~~~n~~g~---~~~~~~l~V~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~v~W~~~g~~l 1831 (2245)
+.+|+|.|.|.+.+..+. ......|.|.. +|.+...+....+.+|+.++|.|.+.+. |.+ .|.|++++..+
T Consensus 93 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~v~~g~~v~L~C~~~g~~P~~i~v~W~k~g~~~ 172 (261)
T 2xqy_G 93 TSEDSAVYYCGRLGYVYGFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSS 172 (261)
T ss_dssp CGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCCC--CCSEEEEEEEEEEEBSSCCEEEEGGGTCCT
T ss_pred CcccCeEEEEEEecCCCcceEECCCEEEEEccCCCCCCeEEEeCCCccccCCCcEEEEEEEEeEeCCCCEEEEecCCCcC
Confidence 999999999999986431 11235777764 4554432222346779999999999985 766 99999998754
Q ss_pred ecCCceEEEEcC---CeEEEEEcccCcccceEEEEEEEcCCeeeEEE
Q psy7042 1832 QSDDRFKFTVLD---DYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGT 1875 (2245)
Q Consensus 1832 ~~~~~~~~~~~~---~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 1875 (2245)
...........+ ....|.|.....+| |.|+|.|.|........
T Consensus 173 ~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~YtC~v~n~~~~~~~~ 218 (261)
T 2xqy_G 173 GVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVD 218 (261)
T ss_dssp TEEECCCEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEE
T ss_pred ceEecCceecCCcEEEEEEEEEeccccCC-CEEEEEEEECCCCccEE
Confidence 211000010111 12468998888888 99999999977654433
No 478
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.38 E-value=1.1e-12 Score=148.09 Aligned_cols=171 Identities=12% Similarity=0.172 Sum_probs=113.5
Q ss_pred CCceEEcCCCeEEEEEEecCcC--CCeEEEeeCC--Eec----------------cCCceEEEEe--cCcEEEEEEeeec
Q psy7042 1704 LKDLVVPLGKLLTLQCEATGTP--VPKCRWLRNG--REI----------------SSGARYRVET--AGGVFRLHFNEVT 1761 (2245)
Q Consensus 1704 ~~~~~~~~G~~v~L~C~~~~~p--~~~v~W~~~~--~~l----------------~~~~~~~~~~--~~~~~~L~i~~v~ 1761 (2245)
+..+.+.+|++++|.|.+.+.+ .+.+.|+|+. ..+ ....|+.+.. .++..+|+|.+++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 86 (215)
T 1c5d_H 7 SGPGLVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSLQ 86 (215)
T ss_dssp ECCCEECTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSCC
T ss_pred CCCeeecCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCCC
Confidence 3457899999999999998764 4789999852 211 0134666654 3457789999999
Q ss_pred cCCCeEEEEEEecCcee---eEEEEEEEecC----CCccccCCCceEEcCCCeEEEEEEEecc-CCc-EEEEEECCEEee
Q psy7042 1762 DVDNGDYTCEAYNSVGF---AHTSSRVKIGT----PPRIDRMPNALYIPEGDNTKVKIFYAGD-QPM-EVSLTKNGRVVQ 1832 (2245)
Q Consensus 1762 ~~d~G~Y~C~~~n~~g~---~~~~~~l~V~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~v~W~~~g~~l~ 1832 (2245)
.+|+|.|.|.+.+..+. ......|.|.. +|.+...+....+.+|+.++|.|.+.|. |.+ .|.|+++|..+.
T Consensus 87 ~~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~ 166 (215)
T 1c5d_H 87 TEDTAIYFCTREDGWNYFDYWGPGTMVTVSSAQTTAPSVYPLAPGCGDTTSSTVTLGCLVKGYFPEPVTVTWNSGALSSD 166 (215)
T ss_dssp GGGCEEEEEEECCSSSCSCCBCCCEEEEECSSCCBCCCEEEECCCSSCCCCSSEEEEEEEEEEBSSCCEEEEGGGTTCCS
T ss_pred cccCEEEEEEEecCCcccceEcCCEEEEecCCCCCCCeEEeccCChhhccCCcEEEEEEEeeeEcCCcEEEEccCCccCc
Confidence 99999999999886421 12235777763 4555433323345789999999999987 777 999999987543
Q ss_pred cCCceEEEEcCCeEEE--EEcccCcccceEEEEEEEcCCeeeEEEE
Q psy7042 1833 SDDRFKFTVLDDYIII--FIKEIRKEDAGDYTVNLSNSSGSVSGTF 1876 (2245)
Q Consensus 1833 ~~~~~~~~~~~~~~~l--~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 1876 (2245)
........ .++...+ .+.....+| |.|+|.|.|..|......
T Consensus 167 ~~~~~~~~-~~g~~~~~s~L~~~~~~~-g~ytC~v~n~~~~~~~~~ 210 (215)
T 1c5d_H 167 VHTFPAVL-QSGLYTLTSSVTSSTWPS-QTVTCNVAHPASSTKVDK 210 (215)
T ss_dssp CCBCCCEE-ETTEEEEEEEEEESSTTT-SCCEEEEEEGGGTEEEEE
T ss_pred eEecCccc-CCCCEEEEEEEecccCCC-CeEEEEEEeCCCCccEEE
Confidence 21111111 1121111 123333355 999999999988765443
No 479
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.38 E-value=6.4e-13 Score=152.98 Aligned_cols=170 Identities=12% Similarity=0.157 Sum_probs=102.9
Q ss_pred CceEEcCCCeEEEEEEecCcC--CCeEEEeeCC--Eecc-----------------CCceEEEEec--CcEEEEEEeeec
Q psy7042 1705 KDLVVPLGKLLTLQCEATGTP--VPKCRWLRNG--REIS-----------------SGARYRVETA--GGVFRLHFNEVT 1761 (2245)
Q Consensus 1705 ~~~~~~~G~~v~L~C~~~~~p--~~~v~W~~~~--~~l~-----------------~~~~~~~~~~--~~~~~L~i~~v~ 1761 (2245)
..+.+.+|++++|.|.+.+.+ .+.+.|+|.. ..+. ...|+.+..+ .+..+|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (257)
T 3bn9_D 8 GGGLVKPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMSSLR 87 (257)
T ss_dssp CCEEECTTCEEEEEEEEESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEESCC
T ss_pred CCEEEcCCCcEEEEEEeccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEECCCC
Confidence 457899999999999998765 5789999853 1110 1246666543 567889999999
Q ss_pred cCCCeEEEEEEecCce----------e---eEEEEEEEecC----CCccccCCCceEEcCCCeEEEEEEEecc-CCc-EE
Q psy7042 1762 DVDNGDYTCEAYNSVG----------F---AHTSSRVKIGT----PPRIDRMPNALYIPEGDNTKVKIFYAGD-QPM-EV 1822 (2245)
Q Consensus 1762 ~~d~G~Y~C~~~n~~g----------~---~~~~~~l~V~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~v 1822 (2245)
.+|+|.|.|.+.+..| . ......|.|.. +|.+........+.+|+.++|.|.+.|. |.+ .|
T Consensus 88 ~~DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~~~~~P~v~~~~p~~~~~~g~~v~L~C~~~g~~P~pi~v 167 (257)
T 3bn9_D 88 AEDTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTV 167 (257)
T ss_dssp GGGCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSSCCBCCEECCCCC-----------CCCEEEEEBSSCCEE
T ss_pred hhhCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCCCCcCCcEEEecCcccccCCCcEEEEEEEeeEECCCcEE
Confidence 9999999999998764 1 11235777764 4655443333346789999999999986 766 99
Q ss_pred EEEECCEEeecCCceEEEEcCC----eEEEEEcccCcccceEEEEEEEcCCeeeEEE
Q psy7042 1823 SLTKNGRVVQSDDRFKFTVLDD----YIIIFIKEIRKEDAGDYTVNLSNSSGSVSGT 1875 (2245)
Q Consensus 1823 ~W~~~g~~l~~~~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 1875 (2245)
+|+++|..+...........++ ...|.|..+..+| |.|+|.|.|........
T Consensus 168 ~W~k~g~~~~~~~~~~~~~~~g~y~~~s~L~I~~~~~~~-g~YtC~v~n~~~~~~~~ 223 (257)
T 3bn9_D 168 SWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVD 223 (257)
T ss_dssp EETTTTCCSSCEECCCEECTTSCEEEEEECCCC--------CEEEEEEEGGGTEEEE
T ss_pred EEeeCCCcCCcEecCCeEcCCCCEEEEEEEEEcccccCC-CeEEEEEEecCCCcCEE
Confidence 9999987642110000111111 2357788887778 99999999976554433
No 480
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.38 E-value=9.7e-13 Score=126.44 Aligned_cols=91 Identities=26% Similarity=0.425 Sum_probs=79.8
Q ss_pred cCCCceEEeeccceeeecCccEEEEEEEEeeCCCeEEEeeCCEeeCCCCcEEEEEeCcEEEEEEcCCCCCCCeEEEEEEE
Q psy7042 2084 AAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAV 2163 (2245)
Q Consensus 2084 ~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 2163 (2245)
...+|.|...+.+..+.+|+.++|.|.+.|.|.|.|.|+|+|..+..... ........|.|.++..+|+|.|+|.|.
T Consensus 8 ~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~---~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 84 (99)
T 2yr3_A 8 MEVAPSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYARS---TCEAGVAELHIQDALPEDHGTYTCLAE 84 (99)
T ss_dssp CCEEEEEEECCCCEEECTTCCEEEECEEEEESCCCCEEEESSSBCSSCCC---EEETTEEEEEECSCCTTCCBCEEEEEE
T ss_pred cccCCceeecCCCCEEeCCCeEEEEEEEeeeCCCeEEEEECCEECcccce---EeeCCeEEEEECCCChhhCEEEEEEEE
Confidence 34469999989999999999999999999999999999999998876553 223445689999999999999999999
Q ss_pred eCCceeeEEEEEEE
Q psy7042 2164 NKGGVKSTKAELII 2177 (2245)
Q Consensus 2164 N~~G~~~~~~~l~V 2177 (2245)
|..|..+.++.|.|
T Consensus 85 N~~g~~~~~~~l~V 98 (99)
T 2yr3_A 85 NALGQVSCSAWVTV 98 (99)
T ss_dssp CSSCEEEEECCEEE
T ss_pred ECCCeEEEEEEEEE
Confidence 99999999888887
No 481
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.38 E-value=9.9e-13 Score=124.42 Aligned_cols=90 Identities=17% Similarity=0.347 Sum_probs=79.2
Q ss_pred CCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECC--eeccCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEEc
Q psy7042 90 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNG--REISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYN 167 (2245)
Q Consensus 90 ~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g--~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 167 (2245)
+|.|..++..+.+.+|+.+.|.|.+.|.|.|.|.|+|+| ..+....+. ....+...|.|.+++.+|+|.|+|.|.|
T Consensus 2 ~P~i~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~--~~~~~~~~L~i~~~~~~D~G~Y~C~a~N 79 (93)
T 1wit_A 2 KPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPELLV--DAKSSTTSIFFPSAKRADSGNYKLKVKN 79 (93)
T ss_dssp CCEECCCCCEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTTSEE--EEETTEEEEECTTBCGGGCEEEEEEEEE
T ss_pred CCeEEcCCCceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCcEEE--EecCCEEEEEECCCChhcCEEEEEEEEc
Confidence 788988889999999999999999999999999999999 888765433 3345556899999999999999999999
Q ss_pred CcccceeEEEEEec
Q psy7042 168 SVGFAHTSSRVKIG 181 (2245)
Q Consensus 168 ~~g~~~~~~~l~V~ 181 (2245)
..|.++.++.|.|+
T Consensus 80 ~~G~~~~~~~l~V~ 93 (93)
T 1wit_A 80 ELGEDEAIFEVIVQ 93 (93)
T ss_dssp TTEEEEEEEEEEEC
T ss_pred CCCeEEEEEEEEEC
Confidence 99999989888874
No 482
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.38 E-value=1.8e-12 Score=124.70 Aligned_cols=94 Identities=31% Similarity=0.544 Sum_probs=84.6
Q ss_pred CCCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECCeeccCCC-eEEEEEcCcEEEEEEeeeccCCCeEEEEEEEc
Q psy7042 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGA-RYRVETAGGVFRLHFNEVTDVDNGDYTCEAYN 167 (2245)
Q Consensus 89 ~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~~-~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 167 (2245)
.+|.|...|....+.+|+.++|.|.+.|.|.|.|.|+|+|..+.... ++.+...++..+|.|.+++.+|+|.|+|.|.|
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N 83 (99)
T 1u2h_A 4 APPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAVN 83 (99)
T ss_dssp EEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCBTTEEEEECGGGEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCEEEEcCCceEecCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCCEEEEEEccCCcCCCEEEEEEEEE
Confidence 47889999999999999999999999999999999999999987654 56666677777899999999999999999999
Q ss_pred CcccceeEEEEEecC
Q psy7042 168 SVGFAHTSSRVKIGT 182 (2245)
Q Consensus 168 ~~g~~~~~~~l~V~~ 182 (2245)
..|....++.|.|..
T Consensus 84 ~~g~~~~~~~l~V~~ 98 (99)
T 1u2h_A 84 EYGARQCEARLEVRG 98 (99)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCCceeEEEEEEEEC
Confidence 999999999998864
No 483
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.37 E-value=7.5e-13 Score=133.73 Aligned_cols=85 Identities=15% Similarity=0.284 Sum_probs=76.0
Q ss_pred ccceeeecCccEEEEEEEEeeCCCeEEEeeCC----------------------------Eee-CCCCcEEEEEeCcEEE
Q psy7042 2094 LRNANAIQNHNAQFQCTITGCPKPTISWLKGS----------------------------REI-TPSARHHIFAEGDTYT 2144 (2245)
Q Consensus 2094 ~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g----------------------------~~l-~~~~~~~~~~~~~~~~ 2144 (2245)
+.++.+.+|+.++|.|.+.|.|.|.|+|+|+| ..+ ....++.+...+....
T Consensus 25 p~~~~v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~~~~s~ 104 (139)
T 1gxe_A 25 PDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKDRSI 104 (139)
T ss_dssp CCEEEESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEETTEEE
T ss_pred CCCEEEeCCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeCCCEEE
Confidence 45678999999999999999999999999998 555 3556788888887889
Q ss_pred EEEcCCCCCCCeEEEEEEEeCCceeeEEEEEEEE
Q psy7042 2145 LIINSVYGVDADEYVCRAVNKGGVKSTKAELIIM 2178 (2245)
Q Consensus 2145 L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 2178 (2245)
|.|.++..+|+|.|+|.|.|.+|..+.++.|.|.
T Consensus 105 L~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V~ 138 (139)
T 1gxe_A 105 FTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVI 138 (139)
T ss_dssp EECSCCCTTTCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred EEECCCCcccCEEEEEEEEeCCceEEEEEEEEEE
Confidence 9999999999999999999999999999999884
No 484
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.37 E-value=1e-12 Score=124.79 Aligned_cols=89 Identities=17% Similarity=0.283 Sum_probs=79.2
Q ss_pred cCCCceEEeeccceeeecCccEEEEEEEEeeCCCeEEEeeCCEeeCCCCcEEEEEeCcEEEEEEcCCCCCCCeEEEEEEE
Q psy7042 2084 AAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAV 2163 (2245)
Q Consensus 2084 ~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 2163 (2245)
...+|.|...+....+.+|+.++|.|.+.|.| |.|.|+|+|..+..+.++.+. ++ .|.|.++..+|+|.|+|.|.
T Consensus 6 ~~~pp~~~~~~~~~~v~~G~~v~l~C~~~g~p-p~i~W~k~g~~~~~~~~~~~~-~~---~L~i~~~~~~D~G~Y~C~a~ 80 (95)
T 2ckn_A 6 QAQPWGVPVEVESLLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLVESNRTRIT-GE---EVEVRDSIPADSGLYACVTS 80 (95)
T ss_dssp SSCSCCBTTBBCCEEECTTSCEEEECCEESSC-CEEEEEBTTBCCCCCSSEEEC-SS---EEEESSCCGGGSEEEEEEEE
T ss_pred CCCCCEEEcCcceEEEcCCCeEEEEEECCCCC-CceEEEECCEecCCCCCEEEe-CC---EEEECCCChHHCEEEEEEec
Confidence 35578888888888999999999999999998 899999999999888776654 33 79999999999999999999
Q ss_pred eCCceeeEEEEEEE
Q psy7042 2164 NKGGVKSTKAELII 2177 (2245)
Q Consensus 2164 N~~G~~~~~~~l~V 2177 (2245)
|..|..+..+.|.|
T Consensus 81 n~~g~~~~~~~l~V 94 (95)
T 2ckn_A 81 SPSGSDTTYFSVNV 94 (95)
T ss_dssp ETTEEEEEEEEEEE
T ss_pred cCCCcEEEEEEEEE
Confidence 99999999998877
No 485
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.37 E-value=2.8e-12 Score=151.58 Aligned_cols=176 Identities=14% Similarity=0.186 Sum_probs=120.9
Q ss_pred CCceeccCCceEEcCCCeEEEEEEecCcCCCeEEEeeCC--Eec-----------------cCCceEEEEe-cCcEEEEE
Q psy7042 1697 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNG--REI-----------------SSGARYRVET-AGGVFRLH 1756 (2245)
Q Consensus 1697 ~p~~~~~~~~~~~~~G~~v~L~C~~~~~p~~~v~W~~~~--~~l-----------------~~~~~~~~~~-~~~~~~L~ 1756 (2245)
.+.+...+..+.+.+|++++|.|.+.+.+.+.+.|+|++ ..+ ....|+.+.. .++..+|.
T Consensus 24 ~~~v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~ 103 (279)
T 2wbj_D 24 GAVVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLT 103 (279)
T ss_dssp CCCEEEECSEEEEETTSCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEE
T ss_pred cceEEeCCCeEEecCCCeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEE
Confidence 455666777899999999999999988888899999863 111 0134666654 35677899
Q ss_pred EeeeccCCCeEEEEEEecCce------eeEEEEEEEecC------CCcccc-CCCceEEcCCCeEEEEEEEecc-CC-cE
Q psy7042 1757 FNEVTDVDNGDYTCEAYNSVG------FAHTSSRVKIGT------PPRIDR-MPNALYIPEGDNTKVKIFYAGD-QP-ME 1821 (2245)
Q Consensus 1757 i~~v~~~d~G~Y~C~~~n~~g------~~~~~~~l~V~~------~p~~~~-~~~~~~~~~g~~~~l~C~~~~~-p~-~~ 1821 (2245)
|.+++.+|+|.|+|.+.|..+ .......|.|.. +|.+.. .+....+.+|+.++|.|.+.|. |. +.
T Consensus 104 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~ 183 (279)
T 2wbj_D 104 VTSAHPEDSSFYICSARDLTSGANNEQFFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVE 183 (279)
T ss_dssp ESSCCGGGCEEEEEEEEETTCBTSCCEEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSCCEEEEEEEEEBSSCEE
T ss_pred EccCCccCCEEEEEEEcccccCCccceeeCCCEEEEEecCCCCCCCCEEEEECCCcccccCCCceEEEEEEeeEcCCCcE
Confidence 999999999999999998421 111234566654 454432 2222334468999999999987 54 79
Q ss_pred EEEEECCEEeecCCceE---EE-E---cCC----eEEEEEcccCccc-ceEEEEEEEcCCeee
Q psy7042 1822 VSLTKNGRVVQSDDRFK---FT-V---LDD----YIIIFIKEIRKED-AGDYTVNLSNSSGSV 1872 (2245)
Q Consensus 1822 v~W~~~g~~l~~~~~~~---~~-~---~~~----~~~l~i~~~~~~d-~G~Y~C~a~n~~g~~ 1872 (2245)
|+|++||+.+....... .. . .+. ...|.|......| .|.|+|.|.|.....
T Consensus 184 v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~~~YtC~v~n~~~~~ 246 (279)
T 2wbj_D 184 LSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSE 246 (279)
T ss_dssp EEEEETTEECCTTEEECSSCEESSTTSTTCCEEEEEEEECCSTTTTCTTCEEEEEEEECCBCT
T ss_pred EEEEECCEECCCCcccccccccccccCCCCcEEEEEEEEEChHHhccCCCEEEEEEEeCCCCC
Confidence 99999999885432110 00 0 111 1347777777654 678999999986544
No 486
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.37 E-value=1.2e-12 Score=128.70 Aligned_cols=98 Identities=29% Similarity=0.501 Sum_probs=87.7
Q ss_pred CCCCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECCeeccC-CCeEEEEEc-CcEEEEEEeeeccCCCeEEEEEE
Q psy7042 88 GEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISS-GARYRVETA-GGVFRLHFNEVTDVDNGDYTCEA 165 (2245)
Q Consensus 88 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~-~~~~~~~~~-~~~~~L~i~~~~~~d~G~Y~C~a 165 (2245)
..+|.|...+..+.+.+|+.++|.|.+.|.|.+.|.|+|+|..+.. ..++.+... ++...|.|.+++.+|+|.|+|.|
T Consensus 6 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a 85 (110)
T 2dm2_A 6 SGAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMA 85 (110)
T ss_dssp SCCCCBSSCCCCEEEETTCCEEEEEEBCCSSCCEEEEECSSCBCCTTCSSEEEEECTTCEEEEEESSCCTTTCSCCEEEE
T ss_pred CCCCEEEecCcCeEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCeEEEEECCCcEEEEEECCCChhhCEEEEEEE
Confidence 3689999999999999999999999999999999999999999885 567777665 55668999999999999999999
Q ss_pred EcCcccceeEEEEEecCCCe
Q psy7042 166 YNSVGFAHTSSRVKIGTPPR 185 (2245)
Q Consensus 166 ~n~~g~~~~~~~l~V~~~P~ 185 (2245)
.|..|..+..+.|.|..+|.
T Consensus 86 ~N~~g~~~~~~~l~V~~~~~ 105 (110)
T 2dm2_A 86 ANPQGRISCTGRLMVQAVNS 105 (110)
T ss_dssp ECTTCCEEECCCEEEECCSC
T ss_pred EECCCeEEEEEEEEEECCCC
Confidence 99999999899999988764
No 487
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.37 E-value=6.7e-13 Score=151.30 Aligned_cols=174 Identities=13% Similarity=0.120 Sum_probs=115.7
Q ss_pred CCcee-ccCCceEEcCCCeEEEEEEecCc-CC-C-eEEEeeCCEec-cCCceEEEEecCc----EEEEEEeeeccCCCeE
Q psy7042 1697 KPDFI-VPLKDLVVPLGKLLTLQCEATGT-PV-P-KCRWLRNGREI-SSGARYRVETAGG----VFRLHFNEVTDVDNGD 1767 (2245)
Q Consensus 1697 ~p~~~-~~~~~~~~~~G~~v~L~C~~~~~-p~-~-~v~W~~~~~~l-~~~~~~~~~~~~~----~~~L~i~~v~~~d~G~ 1767 (2245)
+|.+. ..+....+.+|++++|.|.+.|. |. + .|.|+++|..+ ...........++ ...|.|.+++.+|+|.
T Consensus 12 ~P~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~~~~~~~~~~g~~~~~s~L~I~~~~~~D~g~ 91 (231)
T 2w59_A 12 PIQLYAIPPSPGELYISLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPDPMVLQEHFNGTYSASSAVPVSTQDWLSGER 91 (231)
T ss_dssp CCEEEEECCCHHHHHTSCCCEEEEEEEEESCCTTCEEEEECSSSSCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCC
T ss_pred CCEEEEeCcChhhcccCCceEEEEEEeCccCCCCeEEEEEcCCeeccccccccceECCCCcEEEEEEEEecchhccCCCE
Confidence 44443 45566677899999999999874 63 4 99999999877 3322222111222 3469999999999999
Q ss_pred EEEEEecCceeeEEEEEEEe----cCCCccccC-CCceEEcCCCeEEEEEEEecc-C-CcEEEEEECCEEeecCCceE--
Q psy7042 1768 YTCEAYNSVGFAHTSSRVKI----GTPPRIDRM-PNALYIPEGDNTKVKIFYAGD-Q-PMEVSLTKNGRVVQSDDRFK-- 1838 (2245)
Q Consensus 1768 Y~C~~~n~~g~~~~~~~l~V----~~~p~~~~~-~~~~~~~~g~~~~l~C~~~~~-p-~~~v~W~~~g~~l~~~~~~~-- 1838 (2245)
|+|.+.|..+.......+.+ ..+|.+... +.... ..+..++|.|.+.|. | .+.|+|+|||+.+.......
T Consensus 92 Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~~~~-~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~ 170 (231)
T 2w59_A 92 FTCTVQHEELPLPLSKSVYRNTGPTTPPLIYPFAPHPEE-LSLSRVTLSCLVRGFRPRDIEIRWLRDHRAVPATEFVTTA 170 (231)
T ss_dssp EEEEEECTTCSSCEEEEECCCCSCCBCCEEEEECCCGGG-GGSSEEEEEEEEEEEBSSCCEEEEEETTEECCGGGCEECC
T ss_pred EEEEEEcCCCCCceEEEEecCCCCCcCCEEEEeCCCHHH-hccCceEEEEEEEeccCCCcEEEEEECCEECCCcccccCc
Confidence 99999998765333333332 145654332 22112 235679999999995 4 37999999999986543111
Q ss_pred EEE---------cC-C----eEEEEEcccCcccceEEEEEEEcCCee
Q psy7042 1839 FTV---------LD-D----YIIIFIKEIRKEDAGDYTVNLSNSSGS 1871 (2245)
Q Consensus 1839 ~~~---------~~-~----~~~l~i~~~~~~d~G~Y~C~a~n~~g~ 1871 (2245)
... .+ + ...|.|.....+|.|.|+|.|.|....
T Consensus 171 ~~~~~~~~~~~~~d~gt~~~~s~L~i~~~~~~~~g~YtC~v~n~~l~ 217 (231)
T 2w59_A 171 VLPEERTANGAGGDGDTFFVYSKMSVETAKWNGGTVFACMAVHEALP 217 (231)
T ss_dssp CEECCTTSCC---CCCCEEEEEEEEEEHHHHHTTCCEEEEEECTTST
T ss_pred cccCcccccccCCCCCeEEEEEEEEEeHHHcCCCCcEEEEEEcCCCC
Confidence 011 11 1 145778888888899999999998653
No 488
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.37 E-value=8e-13 Score=128.13 Aligned_cols=94 Identities=26% Similarity=0.435 Sum_probs=87.6
Q ss_pred CCCCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECCeeccCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEEc
Q psy7042 88 GEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYN 167 (2245)
Q Consensus 88 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 167 (2245)
..+|.|...|..+.+.+|+.++|.|.+.|.|.|.|.|+|+|..+..+.++.+...+...+|.|.+++.+|+|.|+|.|.|
T Consensus 12 ~~~~~i~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 91 (106)
T 1nct_A 12 TLAARILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFEISSVQASDEGNYSVVVEN 91 (106)
T ss_dssp SCCCEEEECCCCEEESSSSCEECCEEEECSSCCBCCBCSSSSCCTTCSSEEEEECSSEEEEEECCCCSSCCSEEEECCBC
T ss_pred CCCCEEEECCCCEEEeCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCEEEEEECcCCchhCEEEEEEEEe
Confidence 46899999999999999999999999999999999999999999888899888877777899999999999999999999
Q ss_pred CcccceeEEEEEec
Q psy7042 168 SVGFAHTSSRVKIG 181 (2245)
Q Consensus 168 ~~g~~~~~~~l~V~ 181 (2245)
..|..+.++.|.|.
T Consensus 92 ~~G~~~~~~~l~V~ 105 (106)
T 1nct_A 92 SEGKQEAEFTLTIQ 105 (106)
T ss_dssp SSCBCCEEEEEEEC
T ss_pred CCCeEEEEEEEEEE
Confidence 99999999999885
No 489
>4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}
Probab=99.37 E-value=1.5e-12 Score=147.55 Aligned_cols=186 Identities=16% Similarity=0.148 Sum_probs=103.3
Q ss_pred CCCccceEEEeeeecCCCceEEecceeeeceEEEecCCCCceeeEEEEEEeccccCCCccccCcccccCCCCCCCCCCCC
Q psy7042 929 GGSEITNYVVEKKDYNSTVWTKVSSYVTTPFVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAP 1008 (2245)
Q Consensus 929 ~g~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~n~~g~~~~s~~~~~~~~~t~~~~p~~p~~~ 1008 (2245)
++..|++|.|++..... .+..+......+++++.+|.|++.|.|+|+|.|..|.|+++. ...+.+....|..|..+
T Consensus 18 ~~~~Vt~Y~~~~~~~~~-~~~~~~~~~~~t~~~~~~L~p~t~Y~frV~A~n~~G~g~~s~---~~~~~t~~~~~~~~~~~ 93 (232)
T 4go6_B 18 TNVMVTHYFLPPDDAVP-SDDDLGTVPDYNQLKKQELQPGTAYKFRVAGINACGRGPFSE---ISAFKTCLPGFPGAPCA 93 (232)
T ss_dssp SEEEECEEECCCC-------------------CEEECCTTCEEEEEEEEEETTEEEEECC---CEEEECCCTTSCCCCEE
T ss_pred CCEEEEEEEEEeeCCCC-CcEEEEECCCccEEEeCCCCCCCEEEEEEEEEeCCCcccccc---ceeeeecCCCCCCCCee
Confidence 34478889888765333 333444445667899999999999999999999999988773 44444444444444445
Q ss_pred eeEeecCCeEEEEecCCCCCCCCccceEEEEEEecCCccceeccccccCCcceeEEEEeecccccCCccCchhhhhhhhh
Q psy7042 1009 KGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLL 1088 (2245)
Q Consensus 1009 ~~~~~~~~~v~l~W~~p~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 1088 (2245)
.....+.+++.|+|.+|...+| +|.+|.|+|+..+...+......... . ..|.+...-... ...+....+
T Consensus 94 ~~~~~~~~sv~l~W~~P~~~~G-~i~~Y~v~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~----~~~~~~~~l 163 (232)
T 4go6_B 94 IKISKSPDGAHLTWEPPSVTSG-KIIEYSVYLAIQSSQAGGELKSSTPA--Q---LAFMRVYCGPSP----SCLVQSSSL 163 (232)
T ss_dssp EEEEEETTEEEEEEECCSCCSS-CCCEEEEEEEEC-------------C--C---EEEEEEEEESSS----EEEEEHHHH
T ss_pred eEEecCCCEEEEEEeCCCCCCC-ceeeEEEEEEECCCCCcceeeeccCC--c---eeeEEEEeccCc----eEEEEcccc
Confidence 5566788999999999988766 79999999987665443322111110 0 111111000000 000000000
Q ss_pred cccccccccccCCcEEEEEEEEEecCCCCCCCCCCcceeecCCCCC
Q psy7042 1089 MFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSDIIMCCAPPCA 1134 (2245)
Q Consensus 1089 ~~~~~~i~~L~~~~~Y~~~v~A~n~~G~~~~s~~~~~~~~~~~p~~ 1134 (2245)
...+.+|.+++.|.|+|+|.|.+|.|++|. +.+...++.+
T Consensus 164 ---~~~~~~L~~~t~Y~frV~A~N~~G~Gp~S~---v~t~~~~~~~ 203 (232)
T 4go6_B 164 ---SNAHIDYTTKPAIIFRIAARNEKGYGPATQ---VRWLQETSKD 203 (232)
T ss_dssp ---TTBCBEESSSEEEEEEEEEECSSCBCCCEE---EEEECC----
T ss_pred ---EEeeecCccCCceEEEEEEECCCcCCCCcc---cEEeccCCCC
Confidence 114789999999999999999999998764 4444444433
No 490
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.36 E-value=9.7e-13 Score=126.72 Aligned_cols=96 Identities=15% Similarity=0.271 Sum_probs=85.6
Q ss_pred cCCCCCceecCCcceEEeCCCeEEEEEEEeeecC-CceEEEECCeeccCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEE
Q psy7042 86 VGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPV-PKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCE 164 (2245)
Q Consensus 86 ~~~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~-~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 164 (2245)
+.+.+|.|..++.++.+.+|+.++|.|.+.+.|. +.+.|+|||..+..+.++.+..++...+|.|.+++.+|+|.|+|.
T Consensus 4 V~~~p~~~~~~~~~~~v~~G~~v~l~C~v~~~~~~~~v~W~k~g~~i~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 83 (104)
T 2eny_A 4 GSSGHVGITKRLKTMEVLEGESCSFECVLSHESASDPAMWTVGGKTVGSSSRFQATRQGRKYILVVREAAPSDAGEVVFS 83 (104)
T ss_dssp CCCCCCCCSBCCCCEEEESSCCEEEEEECSSCCCSSCBCCBSSSSBCSBCSSCEEEEETTEEEEEECSCCTTTCSCEEEE
T ss_pred cccCCCEEEecCCCcEEcCCCcEEEEEEEcCCCCCceeEEEECCEECCCCCCEEEEEcCCEEEEEECCCCHHHCEEEEEE
Confidence 3456889999999999999999999999998775 489999999999988899998888888999999999999999999
Q ss_pred EEcCcccceeEEEEEecCCCe
Q psy7042 165 AYNSVGFAHTSSRVKIGTPPR 185 (2245)
Q Consensus 165 a~n~~g~~~~~~~l~V~~~P~ 185 (2245)
|.| ...++.|.|..+|.
T Consensus 84 a~~----~~~~a~L~V~~~p~ 100 (104)
T 2eny_A 84 VRG----LTSKASLIVRERSG 100 (104)
T ss_dssp ETT----EEEEECEEEECCCS
T ss_pred ECC----eeEEEEEEEeCCCc
Confidence 854 56788999999875
No 491
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.36 E-value=9.4e-13 Score=126.81 Aligned_cols=95 Identities=20% Similarity=0.354 Sum_probs=84.5
Q ss_pred CCCceEEeeccceeeecCccEEEEEEEEeeCC-CeEEEeeCCEeeCCCCcEEEEEeCcEEEEEEcCCCCCCCeEEEEEEE
Q psy7042 2085 AKAPEIIVPLRNANAIQNHNAQFQCTITGCPK-PTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAV 2163 (2245)
Q Consensus 2085 ~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~P~-p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 2163 (2245)
..+|.|...+.+..+.+|+.++|.|.+.|.|. +.+.|+|||..|..+.++.+..++....|.|.++..+|+|.|+|.|.
T Consensus 6 ~~p~~~~~~~~~~~v~~G~~v~l~C~v~~~~~~~~v~W~k~g~~i~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 85 (104)
T 2eny_A 6 SGHVGITKRLKTMEVLEGESCSFECVLSHESASDPAMWTVGGKTVGSSSRFQATRQGRKYILVVREAAPSDAGEVVFSVR 85 (104)
T ss_dssp CCCCCCSBCCCCEEEESSCCEEEEEECSSCCCSSCBCCBSSSSBCSBCSSCEEEEETTEEEEEECSCCTTTCSCEEEEET
T ss_pred cCCCEEEecCCCcEEcCCCcEEEEEEEcCCCCCceeEEEECCEECCCCCCEEEEEcCCEEEEEECCCCHHHCEEEEEEEC
Confidence 44678888889999999999999999998875 48999999999998899999999988999999999999999999885
Q ss_pred eCCceeeEEEEEEEEcCCCC
Q psy7042 2164 NKGGVKSTKAELIIMTAPKF 2183 (2245)
Q Consensus 2164 N~~G~~~~~~~l~V~~~p~~ 2183 (2245)
| ...++.|.|..+|..
T Consensus 86 ~----~~~~a~L~V~~~p~~ 101 (104)
T 2eny_A 86 G----LTSKASLIVRERSGP 101 (104)
T ss_dssp T----EEEEECEEEECCCSS
T ss_pred C----eeEEEEEEEeCCCcC
Confidence 5 578899999987753
No 492
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.36 E-value=4.6e-12 Score=121.06 Aligned_cols=91 Identities=18% Similarity=0.338 Sum_probs=83.4
Q ss_pred ceecCCcceEEeCCCeEEEEEEEeee-cCCceEEEECCeeccCCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEEcCcc
Q psy7042 92 DFIVPLKDLVVPLGKLLTLQCEATGT-PVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVG 170 (2245)
Q Consensus 92 ~~~~~~~~~~v~~G~~v~L~C~~~g~-p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g 170 (2245)
.+..+|.++.+.+|+.++|.|.+.|. |.|.|.|+|++..+..+.++.+...++...|.|.+++.+|+|.|+|.|.|..|
T Consensus 3 ~v~~~~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g 82 (97)
T 2bk8_A 3 MVSGQIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENSEKYEITYEDGVAILYVKDITKLDDGTYRCKVVNDYG 82 (97)
T ss_dssp CEECCCCCEEECTTCCEEEEEEEESCCTTCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSC
T ss_pred ceeccCcCEEEcCCCcEEEEEEEeccCCCCEEEEEECCEECcCCCCEEEEEcCCeEEEEEecCChhhCeEEEEEEECCCC
Confidence 35567788999999999999999997 99999999999999988899987778888899999999999999999999999
Q ss_pred cceeEEEEEecC
Q psy7042 171 FAHTSSRVKIGT 182 (2245)
Q Consensus 171 ~~~~~~~l~V~~ 182 (2245)
....++.|.|..
T Consensus 83 ~~~~~~~l~V~~ 94 (97)
T 2bk8_A 83 EDSSYAELFVKG 94 (97)
T ss_dssp EEEEEEEEEETT
T ss_pred eEeEEEEEEEEe
Confidence 999999999875
No 493
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.36 E-value=2.8e-12 Score=124.58 Aligned_cols=92 Identities=18% Similarity=0.255 Sum_probs=75.4
Q ss_pred ceEEeeccceeeecCccEEEEEEEEee---CCCeEEEeeCCEe-eC--CCCcEEEEEe--C----cEEEEEEcCCCCCCC
Q psy7042 2088 PEIIVPLRNANAIQNHNAQFQCTITGC---PKPTISWLKGSRE-IT--PSARHHIFAE--G----DTYTLIINSVYGVDA 2155 (2245)
Q Consensus 2088 p~~~~~~~~~~~~~g~~v~l~C~~~g~---P~p~i~W~~~g~~-l~--~~~~~~~~~~--~----~~~~L~i~~v~~~d~ 2155 (2245)
|.|...|.++.+.+|++++|.|.+.|. |.|.|+|||+... +. .+.++.+... . ....|.|.++..+|+
T Consensus 8 ~~F~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~Da 87 (126)
T 2dav_A 8 ILFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFA 87 (126)
T ss_dssp CSCCSCCCCCEEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTSC
T ss_pred cEEEEcCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCcccC
Confidence 667778888999999999999999875 8999999996421 11 2345555322 1 146899999999999
Q ss_pred eEEEEEEEeCCceeeEEEEEEEEc
Q psy7042 2156 DEYVCRAVNKGGVKSTKAELIIMT 2179 (2245)
Q Consensus 2156 G~Y~C~a~N~~G~~~~~~~l~V~~ 2179 (2245)
|.|+|+|.|.+|..++.+.|+|.+
T Consensus 88 G~Y~Cevsn~~g~~~~~~~L~V~~ 111 (126)
T 2dav_A 88 GNYRCEVTYKDKFDSCSFDLEVHE 111 (126)
T ss_dssp EEEEEEEECSSCEEEECCEEEEEC
T ss_pred EEEEEEEEeCCCcEEEEEEEEEEe
Confidence 999999999999999999999998
No 494
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.36 E-value=9.2e-13 Score=147.67 Aligned_cols=162 Identities=12% Similarity=0.180 Sum_probs=102.0
Q ss_pred EcCCCeEEEEEEecCcCC----CeEEEeeCCEeccCCceE-EEEecCcEE----EEEEeeeccCCCeEEEEEEecCceee
Q psy7042 1709 VPLGKLLTLQCEATGTPV----PKCRWLRNGREISSGARY-RVETAGGVF----RLHFNEVTDVDNGDYTCEAYNSVGFA 1779 (2245)
Q Consensus 1709 ~~~G~~v~L~C~~~~~p~----~~v~W~~~~~~l~~~~~~-~~~~~~~~~----~L~i~~v~~~d~G~Y~C~~~n~~g~~ 1779 (2245)
+.+|++++|.|.+.|.++ +.|.|+|++.++...... .....++.. .|.|.....+|+|.|+|.+.|..+..
T Consensus 15 ~~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~g~Y~C~a~n~~~~~ 94 (207)
T 1l6x_A 15 LMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPA 94 (207)
T ss_dssp HCTTSCCEEEEEEEEECSSSCCCEEEEEETTEEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSS
T ss_pred eecCCceEEEEEEecccCCCCCeEEEEEECCccccCcccCCceeccCCcEEEEEEEEEEHHHccCCceEEEEEEcCcCCc
Confidence 379999999999988653 489999999887543211 111222221 23333444455999999999987764
Q ss_pred EEEEEE----EecCCCccccCCCceEEcCCCeEEEEEEEecc-CC-cEEEEEECCEEeecCCceEEEEcCCe-----EEE
Q psy7042 1780 HTSSRV----KIGTPPRIDRMPNALYIPEGDNTKVKIFYAGD-QP-MEVSLTKNGRVVQSDDRFKFTVLDDY-----III 1848 (2245)
Q Consensus 1780 ~~~~~l----~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~v~W~~~g~~l~~~~~~~~~~~~~~-----~~l 1848 (2245)
.....+ .+..+|.+...+.......|..+.|.|.+.|. |+ +.|+|+|+|..+............++ ..|
T Consensus 95 ~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~~s~l 174 (207)
T 1l6x_A 95 PIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL 174 (207)
T ss_dssp CEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECCCEECTTSCEEEEEEE
T ss_pred ceEEEeccCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeCeECCCeEEEEEECCeeccCccccCceECCCCCEEEEEEE
Confidence 233233 34566765543322222346679999999995 54 49999999998753211111112221 234
Q ss_pred EEcccCcccceEEEEEEEcCCe
Q psy7042 1849 FIKEIRKEDAGDYTVNLSNSSG 1870 (2245)
Q Consensus 1849 ~i~~~~~~d~G~Y~C~a~n~~g 1870 (2245)
.|.....+|.|.|+|.|.|...
T Consensus 175 ~i~~~~~~~~g~YtC~a~n~~l 196 (207)
T 1l6x_A 175 TVDKSRWQQGNVFSCSVMHEAL 196 (207)
T ss_dssp EEEHHHHHTTCCEEEEEECTTS
T ss_pred EECHHHcCCCCEEEEEEEcCCc
Confidence 5555555679999999999764
No 495
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.36 E-value=2.4e-12 Score=124.18 Aligned_cols=96 Identities=29% Similarity=0.413 Sum_probs=83.6
Q ss_pred cCCCeeecCCCceEEcCCCeEEEEEEEecCCCceEEEeeCceeeecCCceEEEE-eCCeEEEEEcccCccCceeEEEEEE
Q psy7042 181 GTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTV-LDDYIIIFIKEIRKEDAGDYTVNLS 259 (2245)
Q Consensus 181 ~~~P~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~-~~~~~~L~i~~~~~~d~G~Y~C~a~ 259 (2245)
..+|.+...|..+.+.+|+.++|.|.+.|.|.+.+.|+|+|..+.......+.. .+....|.|.++..+|+|.|+|.|.
T Consensus 3 ~~~P~~~~~p~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 82 (100)
T 2kdg_A 3 MGPPRFIQVPENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVAK 82 (100)
T ss_dssp CEEEECCCCCCCEEEETTCCEEEEEECEEESCCEEEEEETTEEECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCCeEEeCCCCEEecCCCEEEEEEEEEeeCCCEEEEEECCEECcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEEEE
Confidence 457888888999999999999999999999999999999999998766544333 3445689999999999999999999
Q ss_pred cCCcceEEEEEEEEecC
Q psy7042 260 NSSGSVSGTFTINITGL 276 (2245)
Q Consensus 260 n~~g~~~~~~~l~V~~~ 276 (2245)
|..|..+.++.|.|...
T Consensus 83 n~~g~~~~~~~l~V~~~ 99 (100)
T 2kdg_A 83 NRAGEATFTVQLDVLAK 99 (100)
T ss_dssp ETTEEEEEEEEEEEECC
T ss_pred cCCCeEEEEEEEEEEec
Confidence 99999999999999754
No 496
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.35 E-value=2.7e-12 Score=134.88 Aligned_cols=104 Identities=24% Similarity=0.462 Sum_probs=87.7
Q ss_pred CCCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECCeeccCCCeEEEEEc-CcEEEEEEeeeccCCCeEEEEEEEc
Q psy7042 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETA-GGVFRLHFNEVTDVDNGDYTCEAYN 167 (2245)
Q Consensus 89 ~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~-~~~~~L~i~~~~~~d~G~Y~C~a~n 167 (2245)
.+|.|...+..+.+.+|+.++|.|.+.|.|.|.|.|+|+|..+....++.+... ++...|.|.+++.+|+|.|+|.|.|
T Consensus 40 ~~P~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 119 (154)
T 1fhg_A 40 VKPYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYTCKAVN 119 (154)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEECTTCEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCeEEccCCcEEEeCCCeEEEEEEEEEecCCEEEEEECCEECCCCCcEEEEECCCCeEEEEECCCChhcCEEEEEEEEE
Confidence 589999999999999999999999999999999999999999998888887653 4456899999999999999999999
Q ss_pred CcccceeEEEEEecCCCeeecCCCc
Q psy7042 168 SVGFAHTSSRVKIGTPPRIDRMPNA 192 (2245)
Q Consensus 168 ~~g~~~~~~~l~V~~~P~~~~~~~~ 192 (2245)
..|....++.|.|..+|.+...+..
T Consensus 120 ~~G~~~~~~~l~V~~~p~~~~~~~~ 144 (154)
T 1fhg_A 120 SLGEATCTAELLVETMGKEGEGEGE 144 (154)
T ss_dssp TTEEEEEEEEEEEECC---------
T ss_pred CCCeEEEEEEEEEeCcCcCCCCCCC
Confidence 9999999999999999987766544
No 497
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.35 E-value=1.1e-12 Score=129.23 Aligned_cols=99 Identities=24% Similarity=0.490 Sum_probs=86.6
Q ss_pred CCCceEEeeccceeeecCccEEEEEEEEeeCCCeEEEeeCCEeeCCCCcEEEEE-eCcEEEEEEcCCCCCCCeEEEEEEE
Q psy7042 2085 AKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFA-EGDTYTLIINSVYGVDADEYVCRAV 2163 (2245)
Q Consensus 2085 ~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~a~ 2163 (2245)
..+|.|...+.++.+.+|+.++|.|.+.|.|.|.|.|+|+|..+....++.+.. .+....|.|.++..+|+|.|+|.|.
T Consensus 7 ~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 86 (110)
T 2dm3_A 7 GFRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIAT 86 (110)
T ss_dssp CCCCEEEECCCEEEEESSSCBCCEEEEECSSCCEEECBBSSSBCCCCSSEEEEECTTSCEEEEESSCCGGGCSBBCEEEE
T ss_pred CCCCcEEeCCCcEEEeCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCceEEEEecCCeEEEEEeeCCcccCEEEEEEEE
Confidence 346999999999999999999999999999999999999999988776655443 3445789999999999999999999
Q ss_pred eCCceeeEEEEEEEEcCCCC
Q psy7042 2164 NKGGVKSTKAELIIMTAPKF 2183 (2245)
Q Consensus 2164 N~~G~~~~~~~l~V~~~p~~ 2183 (2245)
|..|..+..+.|.|..+|..
T Consensus 87 n~~g~~~~~~~l~V~~~p~~ 106 (110)
T 2dm3_A 87 NRAGQNSFSLELVVAAKESG 106 (110)
T ss_dssp CSSCEEEECCEEEEECCCCS
T ss_pred CCCCEEEEEEEEEEeCCCCC
Confidence 99999999999999876653
No 498
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.35 E-value=3.2e-12 Score=123.40 Aligned_cols=94 Identities=28% Similarity=0.487 Sum_probs=85.1
Q ss_pred CCCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECCeecc--CCCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEE
Q psy7042 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREIS--SGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAY 166 (2245)
Q Consensus 89 ~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~--~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 166 (2245)
.+|.|...+..+.+.+|+.++|.|.+.|.|.|.+.|+|+|..+. ...++.+...++..+|.|.+++.+|+|.|+|.|.
T Consensus 4 ~pP~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 83 (100)
T 3irg_A 4 IPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLG 83 (100)
T ss_dssp EEEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCeeecCCCcEEEcCCCcEEEEEEEEEcCCCceEEEECCEEeecCCCCEEEEEecCCEEEEEEeecCcccCEEEEEEEE
Confidence 47889888999999999999999999999999999999999987 4558888887777889999999999999999999
Q ss_pred cCcccceeEEEEEecC
Q psy7042 167 NSVGFAHTSSRVKIGT 182 (2245)
Q Consensus 167 n~~g~~~~~~~l~V~~ 182 (2245)
|..|..+.++.|.|..
T Consensus 84 n~~g~~~~~~~l~V~~ 99 (100)
T 3irg_A 84 NEFGSDSATVNIHIRS 99 (100)
T ss_dssp ETTEEEEEEEEEEEEC
T ss_pred eCCCcEEEEEEEEEEe
Confidence 9999988888888753
No 499
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.35 E-value=1.9e-12 Score=129.17 Aligned_cols=109 Identities=24% Similarity=0.319 Sum_probs=92.9
Q ss_pred CCCCceecCCcceEEeCCCeEEEEEEEeeecCCceEEEECCeeccC-CCeEEEEEcCcEEEEEEeeeccCCCeEEEEEEE
Q psy7042 88 GEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISS-GARYRVETAGGVFRLHFNEVTDVDNGDYTCEAY 166 (2245)
Q Consensus 88 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~i~W~~~g~~l~~-~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 166 (2245)
..+|.|...+..+.+.+|+.++|.|.+.|.|.+.|.|+|+|..+.. ..++.+...+ +|.|.+++.+|+|.|+|.|.
T Consensus 6 ~~pP~i~~~p~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~~~~~~~~~~~~---~L~i~~v~~~D~G~Y~C~a~ 82 (118)
T 2eo9_A 6 SGPPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENG---VLQIRYAKLGDTGRYTCIAS 82 (118)
T ss_dssp CCSCCCSBCCCCEEEETTCEEEEECBCCCSSCCEEEEEESSSBCCTTSTTEEEEETT---EEEEESCCGGGCCCEEEEEE
T ss_pred CCCCEEEcCCCCEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCeEEEccCC---EEEEccCCcCCCEEEEEEEE
Confidence 3589999999999999999999999999999999999999998874 5577766554 59999999999999999999
Q ss_pred cCcccceeEEEEEecCCCee--ecCCCceEEcCCC
Q psy7042 167 NSVGFAHTSSRVKIGTPPRI--DRMPNALYIPEGD 199 (2245)
Q Consensus 167 n~~g~~~~~~~l~V~~~P~~--~~~~~~~~v~~G~ 199 (2245)
|..|....++.|.|..+|.+ ...+.+..+.+|.
T Consensus 83 n~~g~~~~~~~l~V~~~~~p~~~~~~~~~~~~~G~ 117 (118)
T 2eo9_A 83 TPSGEATWSAYIEVQEFGVPVQPPRPTDPNLIPSA 117 (118)
T ss_dssp CSSCEEEEECCEEEECCSCCCCCCCCCCCCCCCCC
T ss_pred cCCCcEEEEEEEEEEeCCCCccCCCCCCCccCCCC
Confidence 99999988999999887654 4445666666664
No 500
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.35 E-value=2e-12 Score=125.29 Aligned_cols=94 Identities=22% Similarity=0.415 Sum_probs=85.4
Q ss_pred CCCceEEeeccceeeecCccEEEEEEEEeeCCCeEEEeeCCEeeCCCCcEEEEEeCcEEEEEEcCCCCCCCeEEEEEEEe
Q psy7042 2085 AKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVN 2164 (2245)
Q Consensus 2085 ~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N 2164 (2245)
..||.|...+.+..+.+|+.++|.|.+.| |.|.|.|+|+|..+....++.+..++....|.|.++..+|+|.|+|.|.|
T Consensus 6 ~~pp~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 84 (103)
T 2edf_A 6 SGPAAIIKPLEDQWVAPGEDVELRCELSR-AGTPVHWLKDRKAIRKSQKYDVVCEGTMAMLVIRGASLKDAGEYTCEVEA 84 (103)
T ss_dssp CCCCCEEECCCCEEECTTSCEEECCEESS-SSCCCCEEESSCBCCCSSSEEEEEETTEEEEEESSCCTTTCSEEEEECSS
T ss_pred CCCcEEEecCCccEEcCCCCEEEEEEEeC-CCCcEEEEECCEEccCCCCEEEEECCCEEEEEECCCCcccCEEEEEEEcc
Confidence 45788988889999999999999999998 89999999999999988899999999888999999999999999999999
Q ss_pred CCceeeEEEEEEEEcCCCC
Q psy7042 2165 KGGVKSTKAELIIMTAPKF 2183 (2245)
Q Consensus 2165 ~~G~~~~~~~l~V~~~p~~ 2183 (2245)
.+.++.|.|..+|..
T Consensus 85 ----~~~~~~l~V~~~p~~ 99 (103)
T 2edf_A 85 ----SKSTASLHVEEKASG 99 (103)
T ss_dssp ----CEEEEEEEECCCSSS
T ss_pred ----CCcEEEEEEeCCCCC
Confidence 477899999877654
Done!